CPLX1_HUMAN Blast Output
HumanVirus
1|Sequence|1|10|MEFVMKQALG

***** No hits found ******


2|Sequence|6|15|KQALGGATKD

>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20

Query: 2 QALGGATKD 10
QA+GG T +
Sbjct: 215 QAIGGMTPE 223




3|Sequence|11|20|GATKDMGKML

>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 GATKDMGKML 10
G T DMG+ L
Sbjct: 242 GCTPDMGRCL 251


>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 GATKDMGKML 10
G T DMG+ L
Sbjct: 242 GCTPDMGRCL 251


>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)

Query: 4 KDMGKM 9
KD+GKM
Sbjct: 491 KDVGKM 496


>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 GATKDMGKM 9
G T D GK+
Sbjct: 352 GGTNDTGKI 360


>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1 GATKDMGKML 10
G KD GK++
Sbjct: 16 GKIKDQGKVI 25


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 3 TKDMGKM 9
TKD GK+
Sbjct: 1077 TKDAGKL 1083


>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 3 TKDMGKM 9
TKD GK+
Sbjct: 1077 TKDAGKL 1083


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 3 TKDMGKM 9
TKD GK+
Sbjct: 1077 TKDAGKL 1083




4|Sequence|16|25|MGKMLGGDEE

>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus

Query: 2 GKMLGGD 8
G++LGGD
Sbjct: 343 GELLGGD 349


>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)

Query: 2 GKMLGGD 8
G++LGGD
Sbjct: 343 GELLGGD 349


>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)

Query: 2 GKMLGGD 8
G++LGGD
Sbjct: 343 GELLGGD 349


>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)

Query: 3 KMLGGDEE 10
K+L GDEE
Sbjct: 667 KLLMGDEE 674


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 3 KMLGGD 8
+MLGGD
Sbjct: 1243 QMLGGD 1248


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 3 KMLGGD 8
+MLGGD
Sbjct: 1239 QMLGGD 1244


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 3 KMLGGD 8
+MLGGD
Sbjct: 1238 QMLGGD 1243


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 3 KMLGGD 8
+MLGGD
Sbjct: 1241 QMLGGD 1246


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 3 KMLGGD 8
+MLGGD
Sbjct: 1241 QMLGGD 1246


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 3 KMLGGD 8
+MLGGD
Sbjct: 1241 QMLGGD 1246


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 3 KMLGGD 8
+MLGGD
Sbjct: 1241 QMLGGD 1246


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 3 KMLGGD 8
+MLGGD
Sbjct: 1239 QMLGGD 1244


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 3 KMLGGD 8
+MLGGD
Sbjct: 1241 QMLGGD 1246


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 3 KMLGGD 8
+MLGGD
Sbjct: 1241 QMLGGD 1246


>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996

Query: 1 MGKMLGG 7
+GKM+GG
Sbjct: 29 VGKMIGG 35


>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)

Query: 2 GKMLGGDEE 10
GK+ G D+E
Sbjct: 228 GKIFGVDDE 236


>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983

Query: 1 MGKMLGG 7
+GKM+GG
Sbjct: 29 VGKMIGG 35


>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933

Query: 1 MGKMLGG 7
+GKM+GG
Sbjct: 29 VGKMIGG 35


>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983

Query: 1 MGKMLGG 7
+GKM+GG
Sbjct: 29 VGKMIGG 35


>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980

Query: 1 MGKMLGG 7
+GKM+GG
Sbjct: 29 VGKMIGG 35


>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935

Query: 1 MGKMLGG 7
+GKM+GG
Sbjct: 29 VGKMIGG 35


>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936

Query: 1 MGKMLGG 7
+GKM+GG
Sbjct: 29 VGKMIGG 35


>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954

Query: 1 MGKMLGG 7
+GKM+GG
Sbjct: 29 VGKMIGG 35


>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto

Query: 1 MGKMLGG 7
+GKM+GG
Sbjct: 29 VGKMIGG 35


>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943

Query: 1 MGKMLGG 7
+GKM+GG
Sbjct: 29 VGKMIGG 35


>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40

Query: 1 MGKMLGGD 8
+GK LGG+
Sbjct: 255 VGKSLGGE 262


>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006

Query: 1 MGKMLGG 7
+GKM+GG
Sbjct: 29 VGKMIGG 35


>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann

Query: 1 MGKMLGG 7
+GKM+GG
Sbjct: 29 VGKMIGG 35


>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort

Query: 1 MGKMLGG 7
+GKM+GG
Sbjct: 29 VGKMVGG 35


>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 GKMLGGD 8
GKM GG+
Sbjct: 150 GKMEGGE 156


>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956

Query: 1 MGKMLGG 7
+GKM+GG
Sbjct: 29 VGKMVGG 35


>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)

Query: 2 GKMLGGDEE 10
GKM GG +
Sbjct: 512 GKMPGGSSQ 520


>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)

Query: 4 MLGGDEE 10
++GGDE+
Sbjct: 60 VVGGDED 66


>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)

Query: 4 MLGGDEE 10
++GGDE+
Sbjct: 60 VVGGDED 66


>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)

Query: 4 MLGGDEE 10
++GGDE+
Sbjct: 60 VVGGDED 66




5|Sequence|21|30|GGDEEKDPDA

>sp|U23_HHV6U|GLYCOPROTEIN U23|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 DEEKDPD 9
DEEK PD
Sbjct: 219 DEEKKPD 225


>sp|UL79_HHV6Z|PROTEIN U52|Human herpesvirus 6B (strain Z29)

Query: 2 GDEEKDP 8
GD+E++P
Sbjct: 173 GDQEREP 179


>sp|UL79_HHV6U|PROTEIN U52|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 GDEEKDP 8
GD+E++P
Sbjct: 173 GDQEREP 179


>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)

Query: 4 EEKDPD 9
EEKDPD
Sbjct: 25 EEKDPD 30


>sp|U23_HHV6Z|PROTEIN U23|Human herpesvirus 6B (strain Z29)

Query: 3 DEEKDPD 9
DEE PD
Sbjct: 282 DEENKPD 288


>sp|PG130_VACCC|39KDA core protein OPG130|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 EEKDPD 9
EEKDPD
Sbjct: 25 EEKDPD 30


>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7

Query: 2 GDEEKDPD 9
G+E ++PD
Sbjct: 238 GEERENPD 245


>sp|ST_POVWU|SMALL t antigen|WU polyomavirus (WUPyV)

Query: 1 GGDEEK 6
GG+EEK
Sbjct: 46 GGNEEK 51


>sp|ST_POVBK|SMALL t antigen|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 1 GGDEEK 6
GGDE+K
Sbjct: 46 GGDEDK 51


>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)

Query: 1 GGDEEK 6
GGDE+K
Sbjct: 46 GGDEDK 51


>sp|ST_POVBA|SMALL t antigen|BK polyomavirus (strain AS) (BKPyV)

Query: 1 GGDEEK 6
GGDE+K
Sbjct: 46 GGDEDK 51


>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)

Query: 1 GGDEEK 6
GGDE+K
Sbjct: 46 GGDEDK 51


>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 1 GGDEEK 6
GGDE+K
Sbjct: 46 GGDEDK 51


>sp|ST_POVJC|SMALL t antigen|JC polyomavirus (JCPyV) (JCV)

Query: 1 GGDEEK 6
GGDE+K
Sbjct: 46 GGDEDK 51


>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)

Query: 6 KDPDA 10
KDPDA
Sbjct: 373 KDPDA 377


>sp|VE7_HPV60|PROTEIN E7|Human papillomavirus type 60

Query: 2 GDEEKDPDA 10
DEE PD
Sbjct: 26 ADEELSPDG 34


>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean

Query: 5 EKDPD 9
EKDPD
Sbjct: 33 EKDPD 37


>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)

Query: 1 GGDEEK 6
GG+EEK
Sbjct: 46 GGNEEK 51




6|Sequence|26|35|KDPDAAKKEE

>sp|VE7_HPV30|PROTEIN E7|Human papillomavirus 30

Query: 1 KDPDAAKKEE 10
K P A++EE
Sbjct: 45 KQPQQARQEE 54


>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 KDPDAAKKE 9
++PD KK+
Sbjct: 406 EEPDPVKKD 414


>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)

Query: 1 KDPDAAKKE 9
++PD KK+
Sbjct: 417 EEPDPVKKD 425




7|Sequence|31|40|AKKEEERQEA

>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P

Query: 3 KEEERQEA 10
++EERQ+A
Sbjct: 798 QQEERQKA 805


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 2 KKEEERQEA 10
KK++ER+ A
Sbjct: 1724 KKQQERKTA 1732


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 2 KKEEERQEA 10
KK++ER+ A
Sbjct: 1724 KKQQERKTA 1732


>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27

Query: 3 KEEERQ 8
KEEERQ
Sbjct: 160 KEEERQ 165




8|Sequence|36|45|ERQEALRQAE

>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 1 ERQEALRQAE 10
E QEA QA+
Sbjct: 1537 ELQEAFNQAQ 1546


>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P

Query: 3 QEALRQA 9
EALRQA
Sbjct: 57 HEALRQA 63


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 RQEALRQ 8
R+EA+RQ
Sbjct: 5984 REEAVRQ 5990




9|Sequence|41|50|LRQAEEERKA

***** No hits found ******


10|Sequence|46|55|EERKAKYAKM

>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 EERKAKYAKM 10
EE++A Y K+
Sbjct: 103 EEQRASYQKL 112


>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 EERKAKYAKM 10
EE++A Y K+
Sbjct: 103 EEQRASYQKL 112


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 1 EERKAKYA 8
EER KY+
Sbjct: 910 EERNGKYS 917




11|Sequence|51|60|KYAKMEAERE

>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)

Query: 2 YAKMEAER 9
Y KM AE+
Sbjct: 198 YTKMRAEK 205


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 2 YAKMEAERE 10
YA++ ERE
Sbjct: 1502 YARLRIERE 1510


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 2 YAKMEAERE 10
YA++ ERE
Sbjct: 1502 YARLRIERE 1510


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1 KYAKMEAER 9
KY + EA+R
Sbjct: 884 KYQRTEADR 892


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 1 KYAKMEAER 9
KY + EA+R
Sbjct: 884 KYQRTEADR 892


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1 KYAKMEAER 9
KY + EA+R
Sbjct: 885 KYQRTEADR 893


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 1 KYAKMEAER 9
KY + EA+R
Sbjct: 884 KYQRTEADR 892




12|Sequence|56|65|EAEREAVRQG

>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 4 REAVRQG 10
R+AV+QG
Sbjct: 318 RQAVKQG 324


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 EAEREAVR 8
E +REAVR
Sbjct: 3871 EKKREAVR 3878


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 4 REAVRQG 10
R+A++QG
Sbjct: 318 RQAIKQG 324


>sp|US10_CHV1|VIRION protein US10 homolog|Cercopithecine herpesvirus 1 (CeHV-1) (Simian

Query: 1 EAEREAVRQG 10
EA RE+ R+G
Sbjct: 95 EASRESSRKG 104


>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 EAEREAV 7
+AEREAV
Sbjct: 115 QAEREAV 121


>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 EAEREAV 7
+AEREAV
Sbjct: 115 QAEREAV 121




13|Sequence|61|70|AVRQGIRDKY

>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 AVRQGIRDK 9
A+RQ IRD+
Sbjct: 140 AIRQAIRDR 148


>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 AVRQGIRDK 9
A+RQ IRD+
Sbjct: 140 AIRQAIRDR 148


>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 AVRQGIRDK 9
A+RQ IRD+
Sbjct: 139 AIRQAIRDR 147


>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse

Query: 5 GIRDKY 10
GIRDKY
Sbjct: 1523 GIRDKY 1528


>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United

Query: 5 GIRDKY 10
GIRDKY
Sbjct: 1523 GIRDKY 1528


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 3 RQGIRD 8
RQG+RD
Sbjct: 1252 RQGVRD 1257


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 3 RQGIRD 8
RQG+RD
Sbjct: 1249 RQGVRD 1254


>sp|PHOSP_HMPVC|PHOSPHOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)

Query: 1 AVRQGIRD 8
A R GIRD
Sbjct: 202 AARDGIRD 209


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 1 AVRQGIRD 8
A+ QG+RD
Sbjct: 997 AMEQGVRD 1004


>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)

Query: 2 VRQGIR 7
VRQG+R
Sbjct: 16 VRQGVR 21


>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)

Query: 3 RQGIRD 8
RQG RD
Sbjct: 426 RQGFRD 431


>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain

Query: 3 RQGIRD 8
RQG RD
Sbjct: 426 RQGFRD 431


>sp|PHOSP_HRSVB|PHOSPHOPROTEIN respiratory syncytial virus B

Query: 1 AVRQGIRD 8
+ R GIRD
Sbjct: 161 SARDGIRD 168


>sp|PHOSP_HRSVA|PHOSPHOPROTEIN respiratory syncytial virus A

Query: 1 AVRQGIRD 8
+ R GIRD
Sbjct: 161 SARDGIRD 168


>sp|PHOSP_HRSV1|PHOSPHOPROTEIN respiratory syncytial virus B

Query: 1 AVRQGIRD 8
+ R GIRD
Sbjct: 161 SARDGIRD 168


>sp|PHOSP_HRSV|PHOSPHOPROTEIN respiratory syncytial virus

Query: 1 AVRQGIRD 8
+ R GIRD
Sbjct: 161 SARDGIRD 168


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 1 AVRQGIRD 8
A+ QG++D
Sbjct: 1007 AMEQGVKD 1014


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 1 AVRQGIRD 8
A+ QG++D
Sbjct: 1006 AMEQGVKD 1013


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 1 AVRQGIRD 8
A+ QG++D
Sbjct: 1008 AMEQGVKD 1015


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 1 AVRQGIRD 8
A+ QG++D
Sbjct: 1006 AMEQGVKD 1013


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 1 AVRQGIRD 8
A+ QG++D
Sbjct: 1016 AMEQGVKD 1023


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 1 AVRQGIRD 8
A+ QG++D
Sbjct: 1004 AMEQGVKD 1011


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 1 AVRQGIRD 8
A+ QG++D
Sbjct: 1009 AMEQGVKD 1016


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 1 AVRQGIRD 8
A+ QG++D
Sbjct: 997 AMEQGVKD 1004


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 1 AVRQGIRD 8
A+ QG++D
Sbjct: 998 AMEQGVKD 1005


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 1 AVRQGIRD 8
A+ QG++D
Sbjct: 996 AMEQGVKD 1003


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 1 AVRQGIRD 8
A+ QG++D
Sbjct: 996 AMEQGVKD 1003


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 1 AVRQGIRD 8
A+ QG++D
Sbjct: 998 AMEQGVKD 1005


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 1 AVRQGIRD 8
A+ QG++D
Sbjct: 998 AMEQGVKD 1005


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 1 AVRQGIRD 8
A+ QG++D
Sbjct: 1000 AMEQGVKD 1007


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 1 AVRQGIRD 8
A+ QG++D
Sbjct: 995 AMEQGVKD 1002


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 1 AVRQGIRD 8
A+ QG++D
Sbjct: 1014 AMEQGVKD 1021


>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60

Query: 4 QGIRDKY 10
QGI D Y
Sbjct: 421 QGIEDAY 427


>sp|VPU_HV1YB|PROTEIN Vpu|Human immunodeficiency virus type 1

Query: 2 VRQGIRDK 9
+RQ IRD+
Sbjct: 39 IRQKIRDR 46




14|Sequence|66|75|IRDKYGIKKK

>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United

Query: 1 IRDKYGI 7
IRD YGI
Sbjct: 698 IRDTYGI 704


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 4 KYGIKK 9
KYG+KK
Sbjct: 1844 KYGVKK 1849


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 4 KYGIKK 9
KYG+KK
Sbjct: 1844 KYGVKK 1849


>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P

Query: 3 DKYGIKK 9
D YG+KK
Sbjct: 1031 DPYGLKK 1037


>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)

Query: 4 KYGIKKK 10
+YG+KKK
Sbjct: 216 RYGMKKK 222


>sp|LAP_YMTV5|E3 ubiquitin-protein ligase LAP|Yaba monkey tumor virus (strain

Query: 2 RDKYGIKK 9
++KY IKK
Sbjct: 49 KNKYNIKK 56


>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain

Query: 1 IRDKYG 6
I+DKYG
Sbjct: 68 IKDKYG 73


>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 KYGIKK 9
+YGIKK
Sbjct: 111 RYGIKK 116


>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /

Query: 4 KYGIKK 9
+YGIKK
Sbjct: 111 RYGIKK 116


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 4 KYGIKK 9
K+GIKK
Sbjct: 1585 KFGIKK 1590




15|Sequence|71|80|GIKKKEEREA

***** No hits found ******


16|Sequence|76|85|EEREAEAQAA

>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 EEREAEAQ 8
+ REA+AQ
Sbjct: 1216 DHREADAQ 1223


>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 EEREAEAQ 8
+ REA+AQ
Sbjct: 1216 DHREADAQ 1223




17|Sequence|81|90|EAQAAMEANS

>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 AAMEAN 9
AAMEAN
Sbjct: 2 AAMEAN 7


>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 AAMEAN 9
AAMEAN
Sbjct: 2 AAMEAN 7


>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 3 QAAMEA 8
QAAMEA
Sbjct: 349 QAAMEA 354




18|Sequence|86|95|MEANSEGSLT

>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 3 ANSEGS 8
ANSEGS
Sbjct: 919 ANSEGS 924




19|Sequence|91|100|EGSLTRPKKA

>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain

Query: 2 GSLTRPKK 9
G+L+RP K
Sbjct: 66 GTLSRPPK 73


>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 2 GSLTRPKK 9
G+L+RP K
Sbjct: 66 GTLSRPPK 73


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3 SLTRPKKA 10
++ RPKKA
Sbjct: 802 AIIRPKKA 809


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3 SLTRPKKA 10
++ RPKKA
Sbjct: 802 AIIRPKKA 809


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3 SLTRPKKA 10
++ RPKKA
Sbjct: 802 AIIRPKKA 809


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3 SLTRPKKA 10
++ RPKKA
Sbjct: 802 AIIRPKKA 809


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 1 EGSLTRPKK 9
EG+L P+K
Sbjct: 1500 EGALPNPRK 1508


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 1 EGSLTRPKK 9
EG+L P+K
Sbjct: 1501 EGALPNPRK 1509


>sp|SF33K_ADE02|PROTEIN 33K|Human adenovirus C serotype 2

Query: 3 SLTRPKKA 10
+LT+PKK+
Sbjct: 131 TLTKPKKS 138


>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)

Query: 2 GSLTRPK 8
GSL RP+
Sbjct: 556 GSLDRPR 562




20|Sequence|96|105|RPKKAIPPGC

>sp|VPX_HV2KR|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 2 PKKAIPPG 9
P+K +PPG
Sbjct: 4 PRKTVPPG 11


>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 5 AIPPGC 10
+IPPGC
Sbjct: 632 SIPPGC 637


>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 RPKKAIPPG 9
R + A+PPG
Sbjct: 391 RSRSALPPG 399


>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 PKKAIPPG 9
PK+ +PPG
Sbjct: 333 PKQILPPG 340


>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)

Query: 2 PKKAIPPG 9
PK+ +PPG
Sbjct: 333 PKQILPPG 340


>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)

Query: 1 RPKKAIPPG 9
+ + A+PPG
Sbjct: 391 QSRSAVPPG 399


>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 RPKKAIPP 8
RPK+ PP
Sbjct: 155 RPKRRKPP 162


>sp|PG181_VACCA|PROTEIN OPG181|Vaccinia virus (strain Ankara) (VACV)

Query: 1 RPKKAIP 7
+PK AIP
Sbjct: 99 KPKDAIP 105


>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)

Query: 1 RPKKAIP 7
+PK AIP
Sbjct: 103 KPKDAIP 109


>sp|VIF_HV1MA|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 156 PKKTRPP 162


>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus

Query: 2 PKKAIPPG 9
PK+ PPG
Sbjct: 10 PKRDPPPG 17


>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate

Query: 2 PKKAIPPG 9
PK+ PPG
Sbjct: 10 PKRDPPPG 17


>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 156 PKKTKPP 162


>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 PKKAIPPG 9
PK+ PPG
Sbjct: 10 PKRDPPPG 17


>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)

Query: 2 PKKAIPPG 9
PK+ PPG
Sbjct: 10 PKRDPPPG 17


>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)

Query: 2 PKKAIPPG 9
PK+ PPG
Sbjct: 10 PKRDPPPG 17


>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)

Query: 2 PKKAIPPG 9
PK+ PPG
Sbjct: 10 PKRDPPPG 17


>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 156 PKKTKPP 162


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 2 PKKAIPP 8
P+K+ PP
Sbjct: 1835 PQKSTPP 1841


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 2 PKKAIPP 8
P+K+ PP
Sbjct: 1834 PQKSTPP 1840


>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 156 PKKTKPP 162


>sp|VIF_HV1MP|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 157 PKKIKPP 163


>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 156 PKKVKPP 162


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 1 RPKKAIPPG 9
RP K PP
Sbjct: 2273 RPTKKFPPA 2281


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 1 RPKKAIP 7
RP +A+P
Sbjct: 854 RPPRAVP 860


>sp|VIF_HV1M2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 157 PKKIKPP 163


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 1 RPKKAIP 7
RP +A+P
Sbjct: 822 RPPRAVP 828


>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)

Query: 1 RPKKAIPPG 9
RP PPG
Sbjct: 386 RPAPGSPPG 394


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 1 RPKKAIP 7
RP +A+P
Sbjct: 849 RPPRAVP 855


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 1 RPKKAIP 7
RP +A+P
Sbjct: 849 RPPRAVP 855


>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 156 PKKTKPP 162


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 1 RPKKAIP 7
RP +A+P
Sbjct: 850 RPPRAVP 856


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 1 RPKKAIP 7
RP +A+P
Sbjct: 850 RPPRAVP 856


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 1 RPKKAIP 7
RP +A+P
Sbjct: 822 RPPRAVP 828


>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 156 PKKIKPP 162


>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain

Query: 5 AIPPGC 10
A+P GC
Sbjct: 243 AVPDGC 248


>sp|VIF_HV1Z2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 156 PKKIKPP 162


>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 156 PKKIKPP 162


>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 156 PKKIKPP 162


>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 156 PKKIKPP 162


>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 156 PKKIKPP 162


>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain

Query: 5 AIPPGC 10
AIP GC
Sbjct: 236 AIPGGC 241


>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)

Query: 5 AIPPGC 10
AIP GC
Sbjct: 236 AIPGGC 241


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2 PKKAIPPG 9
PKK PP
Sbjct: 2277 PKKRFPPA 2284


>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 156 PKKIKPP 162


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 RPKKAI 6
RPKKA+
Sbjct: 805 RPKKAV 810


>sp|VIF_HV1Z6|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 156 PKKIKPP 162


>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 156 PKKIKPP 162


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 RPKKAI 6
RPKKA+
Sbjct: 805 RPKKAV 810


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 RPKKAI 6
RPKKA+
Sbjct: 805 RPKKAV 810


>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 KKAIPPG 9
KKA+P G
Sbjct: 93 KKAVPEG 99


>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 RPKKAIPPGC 10
RP +P GC
Sbjct: 705 RPMPTVPKGC 714


>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 RPKKAIPPGC 10
RP +P GC
Sbjct: 704 RPMPTVPKGC 713


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 RPKKAI 6
RPKKA+
Sbjct: 805 RPKKAV 810


>sp|VIF_HV1SC|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 73 PKKTKPP 79


>sp|VIF_HV1MN|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 156 PKKIKPP 162


>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 PKKAIPP 8
PKK PP
Sbjct: 156 PKKIKPP 162


>sp|DYR_HHV8P|PUTATIVE Dihydrofolate reductase|Human herpesvirus 8 type P

Query: 1 RPKKAIPP 8
RP+ A PP
Sbjct: 198 RPRPATPP 205




21|Sequence|101|110|IPPGCGDEVE

>sp|UL76_HCMVM|PROTEIN UL76|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 IPPGCGDEVE 10
+P GCGD+ +
Sbjct: 1 MPSGCGDDAD 10


>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)

Query: 2 PPGCG 6
PPGCG
Sbjct: 339 PPGCG 343


>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 PPGCG 6
PPGCG
Sbjct: 339 PPGCG 343


>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant

Query: 2 PPGCG 6
PPGCG
Sbjct: 339 PPGCG 343


>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 IPPGC 5
IPPGC
Sbjct: 633 IPPGC 637


>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)

Query: 2 PPGCGDEVE 10
PPGC + VE
Sbjct: 1314 PPGCRELVE 1322


>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)

Query: 2 PPGCGDEVE 10
PPGC + VE
Sbjct: 1314 PPGCRELVE 1322


>sp|VPX_HV2UC|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 IPPGCGDE 8
+PPG DE
Sbjct: 7 VPPGNSDE 14


>sp|VPX_HV2D2|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 IPPGCGDE 8
+PPG DE
Sbjct: 7 VPPGNSDE 14


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1 IPPGCGDEV 9
+ PGCG V
Sbjct: 3250 VSPGCGRSV 3258


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 1 IPPGCG 6
I PGCG
Sbjct: 3252 ISPGCG 3257


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 1 IPPGCG 6
I PGCG
Sbjct: 3252 ISPGCG 3257


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 2 PPGCGDE 8
PPG DE
Sbjct: 1807 PPGTSDE 1813


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2 PPGCGDE 8
PPG DE
Sbjct: 1807 PPGTSDE 1813


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 2 PPGCGDE 8
PPG DE
Sbjct: 1807 PPGTSDE 1813


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 2 PPGCGDE 8
PPG DE
Sbjct: 1807 PPGTSDE 1813


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2 PPGCGDE 8
PPG DE
Sbjct: 1807 PPGTSDE 1813


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 2 PPGCGDE 8
PPG DE
Sbjct: 1807 PPGTSDE 1813


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 2 PPGCGDE 8
PPG DE
Sbjct: 1807 PPGTSDE 1813


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 2 PPGCGDE 8
PPG DE
Sbjct: 1807 PPGTSDE 1813


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 2 PPGCGDE 8
PPG DE
Sbjct: 1807 PPGTSDE 1813


>sp|PG110_VACCC|LATE transcription elongation factor OPG110|Vaccinia virus (strain

Query: 3 PGCGDEVE 10
PG GD VE
Sbjct: 92 PGVGDIVE 99


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 IPPGCG 6
+ PGCG
Sbjct: 4594 VAPGCG 4599


>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)

Query: 1 IPPGCGD 7
IPP C D
Sbjct: 846 IPPACKD 852


>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)

Query: 1 IPPGCGDE 8
+PP GD+
Sbjct: 129 VPPSLGDD 136


>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 IPPGCGDE 8
+PP GD+
Sbjct: 129 VPPSLGDD 136


>sp|PG115_VACCA|CORE protein OPG115|Vaccinia virus (strain Ankara) (VACV)

Query: 1 IPPGCGDE 8
+PP GD+
Sbjct: 125 VPPSLGDD 132


>sp|PG115_MONPV|CORE protein OPG115|Monkeypox virus (MPXV)

Query: 1 IPPGCGDE 8
+PP GD+
Sbjct: 125 VPPSLGDD 132


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1 IPPGCG 6
+ PGCG
Sbjct: 856 VEPGCG 861


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 IPPGCG 6
+ PGCG
Sbjct: 856 VEPGCG 861


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 2 PPGC 5
PPGC
Sbjct: 589 PPGC 592


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1 IPPGCG 6
+ PGCG
Sbjct: 3252 VSPGCG 3257


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1 IPPGCG 6
+ PGCG
Sbjct: 3252 VSPGCG 3257


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1 IPPGCG 6
+ PGCG
Sbjct: 3252 VSPGCG 3257


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 2 PPGC 5
PPGC
Sbjct: 591 PPGC 594


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1 IPPGCG 6
+ PGCG
Sbjct: 3252 VSPGCG 3257


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 2 PPGC 5
PPGC
Sbjct: 591 PPGC 594


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 2 PPGC 5
PPGC
Sbjct: 591 PPGC 594


>sp|PG003_VACCC|TRUNCATED Ankyrin repeat protein OPG003|Vaccinia virus (strain Copenhagen)

Query: 3 PGCGDEVE 10
P C DE E
Sbjct: 195 PNCADEDE 202


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 2 PPGC 5
PPGC
Sbjct: 591 PPGC 594


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1 IPPGCG 6
+ PGCG
Sbjct: 3253 VSPGCG 3258


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1 IPPGCG 6
+ PGCG
Sbjct: 3254 VSPGCG 3259


Query: 2 PPGCGD 7
PPG GD
Sbjct: 1815 PPGRGD 1820


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1 IPPGCG 6
+ PGCG
Sbjct: 3254 VSPGCG 3259


Query: 2 PPGCGD 7
PPG GD
Sbjct: 1815 PPGRGD 1820


>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)

Query: 1 IPPGCGD 7
IPP C D
Sbjct: 853 IPPACED 859


>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49

Query: 2 PPGCG 6
PP CG
Sbjct: 438 PPDCG 442


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 1 IPPGCG 6
+P GCG
Sbjct: 172 LPDGCG 177


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 3 PGCG 6
PGCG
Sbjct: 5363 PGCG 5366


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3 PGCG 6
PGCG
Sbjct: 4596 PGCG 4599


>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)

Query: 2 PPGC 5
PPGC
Sbjct: 591 PPGC 594


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 4 GCGDEV 9
GC DE+
Sbjct: 1460 GCNDEI 1465


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 1 IPPGCGDEVE 10
+P G GD +E
Sbjct: 576 MPQGLGDLIE 585


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 1 IPPGCGDEVE 10
+P G GD +E
Sbjct: 576 MPQGLGDLIE 585


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 2 PPGCGD 7
PPG G+
Sbjct: 545 PPGAGE 550


>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 PPGCG 6
PP CG
Sbjct: 146 PPPCG 150


>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 PPGCG 6
PP CG
Sbjct: 140 PPPCG 144


>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)

Query: 4 GCGDE 8
GCGD+
Sbjct: 132 GCGDK 136


>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 GCGDE 8
GCGD+
Sbjct: 131 GCGDK 135


>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New

Query: 2 PPGCGDE 8
PP GD+
Sbjct: 198 PPNIGDQ 204


>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 PGCG 6
PGCG
Sbjct: 294 PGCG 297


>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 PGCG 6
PGCG
Sbjct: 294 PGCG 297


>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2

Query: 3 PGCGDE 8
PG GDE
Sbjct: 316 PGKGDE 321


>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007

Query: 2 PPGCGDE 8
PP GD+
Sbjct: 198 PPNIGDQ 204


>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)

Query: 2 PPGCGDE 8
PPGC +
Sbjct: 507 PPGCAAQ 513


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 2 PPGCGD 7
PPG G+
Sbjct: 467 PPGAGE 472


>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2 PPGCG 6
PP CG
Sbjct: 402 PPTCG 406


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 3 PGCG 6
PGCG
Sbjct: 1216 PGCG 1219


>sp|HBSAG_HBVH1|LARGE envelope protein|Hepatitis B virus genotype H

Query: 1 IPPGC 5
+PPGC
Sbjct: 218 VPPGC 222


>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 PPGCG 6
PP CG
Sbjct: 402 PPTCG 406


>sp|HBSAG_HBVH3|LARGE envelope protein|Hepatitis B virus genotype H

Query: 1 IPPGC 5
+PPGC
Sbjct: 218 VPPGC 222


>sp|HBSAG_HBVH2|LARGE envelope protein|Hepatitis B virus genotype H

Query: 1 IPPGC 5
+PPGC
Sbjct: 218 VPPGC 222


>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)

Query: 1 IPPGCG 6
IPP CG
Sbjct: 132 IPPPCG 137


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 2 PPGC 5
PPGC
Sbjct: 830 PPGC 833


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 2 PPGC 5
PPGC
Sbjct: 830 PPGC 833


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 2 PPGC 5
PPGC
Sbjct: 830 PPGC 833


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 2 PPGC 5
PPGC
Sbjct: 830 PPGC 833


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 4 GCGDEVE 10
G GDE+E
Sbjct: 568 GLGDELE 574


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 2 PPGC 5
PPGC
Sbjct: 830 PPGC 833


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 2 PPGC 5
PPGC
Sbjct: 830 PPGC 833


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 2 PPGC 5
PPGC
Sbjct: 830 PPGC 833


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 2 PPGC 5
PPGC
Sbjct: 830 PPGC 833


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 2 PPGC 5
PPGC
Sbjct: 830 PPGC 833


>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)

Query: 1 IPPGCGD 7
I PG GD
Sbjct: 38 IDPGLGD 44


>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5 CGDEV 9
CGDE+
Sbjct: 298 CGDEL 302


>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5 CGDEV 9
CGDE+
Sbjct: 298 CGDEL 302


>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)

Query: 1 IPPGCGD 7
I PG GD
Sbjct: 38 IDPGLGD 44


>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1 IPPGCGD 7
I PG GD
Sbjct: 38 IDPGLGD 44


>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1 IPPGCGD 7
I PG GD
Sbjct: 38 IDPGLGD 44




22|Sequence|106|115|GDEVEEEDES

>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 2 DEVEEEDE 9
D VEEED+
Sbjct: 140 DSVEEEDD 147


>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 2 DEVEEEDE 9
D VEEED+
Sbjct: 140 DSVEEEDD 147


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 4 VEEEDE 9
VEEEDE
Sbjct: 2260 VEEEDE 2265


>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)

Query: 2 DEVEEEDES 10
DE E EDES
Sbjct: 182 DEGEGEDES 190


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 3 EVEEEDES 10
E+EEE+E+
Sbjct: 1046 ELEEENEA 1053


>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)

Query: 1 GDEVEEEDES 10
G E E++DE+
Sbjct: 703 GSEPEDDDEN 712


>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)

Query: 1 GDEVEEEDES 10
G E E++DE+
Sbjct: 706 GSEPEDDDEN 715


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1 GDEVEEED 8
GD+VEE +
Sbjct: 1027 GDDVEESE 1034


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1 GDEVEEED 8
GD+VEE +
Sbjct: 1027 GDDVEESE 1034


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 2 DEVEEEDE 9
D+ +EEDE
Sbjct: 1036 DDSKEEDE 1043


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 2 DEVEEEDE 9
D+ +EEDE
Sbjct: 1036 DDSKEEDE 1043


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 1 GDEVEE 6
GDE+EE
Sbjct: 570 GDELEE 575


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1 GDEVEEED 8
GD+VEE +
Sbjct: 1027 GDDVEESE 1034


>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus

Query: 2 DEVEEEDE 9
DEV E D+
Sbjct: 296 DEVHEHDQ 303


>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)

Query: 2 DEVEEEDE 9
DEV E D+
Sbjct: 296 DEVHEHDQ 303


>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)

Query: 2 DEVEEEDE 9
DEV E D+
Sbjct: 296 DEVHEHDQ 303


>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 DEVEEEDE 9
DEV E D+
Sbjct: 296 DEVHEHDQ 303


>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)

Query: 2 DEVEEEDE 9
DEV E D+
Sbjct: 296 DEVHEHDQ 303


>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)

Query: 2 DEVEEEDE 9
DEV E D+
Sbjct: 296 DEVHEHDQ 303


>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1 GDEVEEED 8
GD+VEE +
Sbjct: 1027 GDDVEESE 1034


>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)

Query: 1 GDEVEEED 8
GDE EED
Sbjct: 715 GDEEWEED 722


>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1

Query: 2 DEVEEEDE 9
DEV E D+
Sbjct: 308 DEVHEHDQ 315


>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 1 GDEVEE 6
GDEVE+
Sbjct: 428 GDEVED 433


>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)

Query: 2 DEVEEEDES 10
D +EEDE+
Sbjct: 697 DTSDEEDEN 705


>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)

Query: 1 GDEVEEED 8
GDE +ED
Sbjct: 775 GDEYSQED 782




23|Sequence|111|120|EEDESILDTV

>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)

Query: 1 EEDESILDTV 10
E+DESI +TV
Sbjct: 605 EDDESIYETV 614


>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)

Query: 1 EEDESILDTV 10
E+DESI +TV
Sbjct: 607 EDDESIYETV 616


>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)

Query: 2 EDESILDTV 10
EDE LD+V
Sbjct: 85 EDEVFLDSV 93


>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)

Query: 2 EDESILDTV 10
EDE LD+V
Sbjct: 85 EDEVFLDSV 93


>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)

Query: 2 EDESILDTV 10
EDE LD+V
Sbjct: 85 EDEVFLDSV 93


>sp|HEMA_VACCA|PROTEIN OPG185|Vaccinia virus (strain Ankara) (VACV)

Query: 1 EEDESILDTV 10
EED ++ DTV
Sbjct: 215 EEDHTVTDTV 224


>sp|HEMA_VACCT|PROTEIN OPG185|Vaccinia virus (strain Tian Tan)

Query: 1 EEDESILDTV 10
EED ++ DTV
Sbjct: 215 EEDHTVTDTV 224


>sp|HEMA_VACCI|PROTEIN OPG185|Vaccinia virus (strain IHD-J) (VACV)

Query: 1 EEDESILDTV 10
EED ++ DTV
Sbjct: 215 EEDHTVTDTV 224


>sp|HEMA_CWPXG|PROTEIN OPG185|Cowpox virus (strain GRI-90 /

Query: 1 EEDESILDTV 10
EED ++ DTV
Sbjct: 214 EEDHTVTDTV 223


>sp|HEMA_VACCC|PROTEIN OPG185|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 EEDESILDTV 10
EED ++ DTV
Sbjct: 215 EEDHTVTDTV 224


>sp|HEMA_MONPV|PROTEIN OPG185|Monkeypox virus (MPXV)

Query: 1 EEDESILDTV 10
EED ++ DTV
Sbjct: 213 EEDHTVTDTV 222


>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)

Query: 3 DESILDTV 10
DE+ LDT+
Sbjct: 102 DEAFLDTL 109


>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 DESILDTV 10
DE+ LDT+
Sbjct: 102 DEAFLDTL 109


>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)

Query: 3 DESILDTV 10
DE+ LDT+
Sbjct: 102 DEAFLDTL 109


>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)

Query: 3 DESILDTV 10
DE+ LDT+
Sbjct: 102 DEAFLDTL 109


>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)

Query: 3 DESILDTV 10
DE+ LDT+
Sbjct: 102 DEAFLDTL 109


>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)

Query: 3 DESILDTV 10
DE+ LDT+
Sbjct: 102 DEAFLDTL 109


>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)

Query: 3 DESILDTV 10
DE+ LDT+
Sbjct: 102 DEAFLDTL 109


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 2 EDESILDTV 10
EDE++LD +
Sbjct: 1700 EDENMLDNI 1708


>sp|UL141_HCMVM|PROTEIN UL141|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 DESILDTV 10
DE ILD V
Sbjct: 91 DELILDAV 98


>sp|HEMA_VAR67|PROTEIN OPG185|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 EEDESILDTV 10
+ED ++ DTV
Sbjct: 216 KEDHTVTDTV 225


>sp|PG115_MONPV|CORE protein OPG115|Monkeypox virus (MPXV)

Query: 2 EDESILDT 9
E+E +LDT
Sbjct: 218 ENEKVLDT 225


>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 EDESILDT 9
E+E +LDT
Sbjct: 222 ENEKVLDT 229




24|Sequence|116|125|ILDTVIKYLP

>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 2 LDTVIKYLP 10
LD+VI+YLP
Sbjct: 2026 LDSVIQYLP 2034


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2 LDTVIKYLP 10
LD+VI+YLP
Sbjct: 2026 LDSVIQYLP 2034


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 2 LDTVIKYLP 10
LD+VI+YLP
Sbjct: 2026 LDSVIQYLP 2034


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2 LDTVIKYLP 10
LD+VI+YLP
Sbjct: 2026 LDSVIQYLP 2034


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 2 LDTVIKYLP 10
LD+VI+YLP
Sbjct: 2026 LDSVIQYLP 2034


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1 ILDTVIKYL 9
+LDTV K+L
Sbjct: 2670 VLDTVEKWL 2678


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 1 ILDTVIKYL 9
+LDTV K+L
Sbjct: 2671 VLDTVEKWL 2679


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 ILDTVIKYL 9
+LDTV K+L
Sbjct: 2670 VLDTVEKWL 2678


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1 ILDTVIKYL 9
+LDTV K+L
Sbjct: 2670 VLDTVEKWL 2678


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 ILDTVIKYL 9
+LDTV K+L
Sbjct: 2670 VLDTVEKWL 2678


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1 ILDTVIKYL 9
+LDTV K+L
Sbjct: 2670 VLDTVEKWL 2678


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1 ILDTVIKYL 9
+LDTV K+L
Sbjct: 2670 VLDTVEKWL 2678


>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 1 ILDTVIKYLP 10
+LD V+ Y P
Sbjct: 31 LLDVVLSYKP 40


>sp|PHOSP_PI1HD|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 1 ILDTVIKYLP 10
+LD V+ Y P
Sbjct: 31 LLDVVLSYKP 40


>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 1 ILDTVIKYLP 10
+LD V+ Y P
Sbjct: 31 LLDVVLSYKP 40


>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 1 ILDTVIKYLP 10
+LD V+ Y P
Sbjct: 31 LLDVVLSYKP 40


>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H

Query: 3 DTVIKYL 9
DTV++YL
Sbjct: 142 DTVLEYL 148




25|Sequence|121|134|IKYLPGPLQDMLKK

>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)

Query: 2 KYLPGPLQDMLKK 14
K PGPL+ + ++
Sbjct: 236 KAFPGPLRALARR 248


>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)

Query: 2 KYLPGPLQDMLKK 14
K PGPL+ + ++
Sbjct: 236 KAFPGPLRALARR 248


>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann

Query: 2 KYLPGPLQDMLKK 14
K PGPL+ + ++
Sbjct: 236 KAFPGPLRALARR 248


>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 KYLPGPLQD 10
KYLP P D
Sbjct: 161 KYLPFPTDD 169


>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)

Query: 2 KYLPGPLQD 10
KYLP P D
Sbjct: 161 KYLPFPTDD 169


>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 KYLPGPLQD 10
KYLP P D
Sbjct: 161 KYLPFPTDD 169


>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)

Query: 2 KYLPGPLQD 10
KYLP P D
Sbjct: 160 KYLPFPTDD 168


>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16

Query: 2 KYLPGPLQDM 11
KYL PL D+
Sbjct: 89 KYLVSPLSDI 98


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 6 GPLQDMLK 13
GPL D+LK
Sbjct: 1221 GPLLDILK 1228


>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30

Query: 2 KYLPGPLQDM 11
KYL PL D+
Sbjct: 88 KYLGSPLGDI 97


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 LPGPLQDML 12
LPG L D+L
Sbjct: 1212 LPGSLGDIL 1220


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 4 LPGPLQDML 12
LPG L D+L
Sbjct: 1212 LPGSLGDIL 1220


>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16

Query: 5 PGPLQDMLKK 14
P P +D LKK
Sbjct: 434 PAPKEDPLKK 443


>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66

Query: 2 KYLPGPLQDM 11
KY+ PL D+
Sbjct: 88 KYIGSPLSDI 97


>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 IKYLPG 6
I+YLPG
Sbjct: 215 IEYLPG 220


>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31

Query: 2 KYLPGPLQDM 11
KY+ PL D+
Sbjct: 88 KYVGSPLSDI 97


>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)

Query: 1 IKYLPGPLQ 9
+K+ P P+Q
Sbjct: 286 VKFTPEPIQ 294


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 7 PLQDMLKK 14
PL DM KK
Sbjct: 1460 PLMDMEKK 1467


>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)

Query: 3 YLPGPL 8
++PGPL
Sbjct: 515 FMPGPL 520


>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)

Query: 3 YLPGPL 8
++PGPL
Sbjct: 515 FMPGPL 520


>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 KYLPG 6
KYLPG
Sbjct: 613 KYLPG 617


>sp|CAP8_ADE41|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 41

Query: 3 YLPGPLQDML 12
Y PGP++ ++
Sbjct: 124 YSPGPIKRLI 133


>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)

Query: 3 YLPGPLQDMLK 13
YLP P++ L+
Sbjct: 641 YLPRPIEFALR 651






THE END