1|SequenceR|10|1|VLLGSRFVAM
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 3 LGSRFVA 9
LG+RFV+
Sbjct: 249 LGNRFVS 255
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 3 LGSRFVA 9
+GSRF++
Sbjct: 359 IGSRFIS 365
2|SequenceR|15|6|LPTTLVLLGS
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 LPTTLVLLGS 10
L TT+VLL S
Sbjct: 2181 LCTTMVLLSS 2190
Query: 2 PTTLVLLGS 10
PTTL +GS
Sbjct: 5306 PTTLQAVGS 5314
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 LPTTLVLLGS 10
L TT+VLL S
Sbjct: 2181 LCTTMVLLSS 2190
3|SequenceR|20|11|PALSALPTTL
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 PALSALPTTL 10
P LS+LPTTL
Sbjct: 664 PDLSSLPTTL 673
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 PALSALPTTL 10
P LS+LPTTL
Sbjct: 664 PDLSSLPTTL 673
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 PALSALPTTL 10
P LS+LPTTL
Sbjct: 664 PDLSSLPTTL 673
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 PALSALPTTL 10
P L A+PTT+
Sbjct: 178 PGLLAMPTTV 187
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 PALSALPTTL 10
P L A+PTT+
Sbjct: 178 PGLLAMPTTV 187
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 PALSALPTTL 10
P L A+PTT+
Sbjct: 178 PGLLAMPTTV 187
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 PALSALPTTL 10
P L A+PTT+
Sbjct: 178 PGLLAMPTTV 187
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 PALSALPTTL 10
P L A+PTT+
Sbjct: 178 PGLLAMPTTV 187
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 PALSALPTT 9
P L A+PTT
Sbjct: 178 PGLLAMPTT 186
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 2 ALSALPTTL 10
A S+LPTTL
Sbjct: 304 ARSSLPTTL 312
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 2 ALSALPTTL 10
A S+LPTTL
Sbjct: 305 ARSSLPTTL 313
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 4 SALPTTL 10
SA+PTT+
Sbjct: 855 SAIPTTI 861
>sp|UL127_HCMVA|UNCHARACTERIZED protein UL127|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PALSALPTTL 10
P+LSA+ TT+
Sbjct: 91 PSLSAINTTI 100
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 PALSALPTTL 10
P L +PTT+
Sbjct: 178 PGLLTMPTTV 187
4|SequenceR|25|16|ISALRPALSA
>sp|VP40_EBORR|MATRIX protein VP40|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 ISALRPALS 9
++ALRP LS
Sbjct: 200 VNALRPGLS 208
>sp|VP40_EBORE|MATRIX protein VP40|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 ISALRPALS 9
++ALRP LS
Sbjct: 200 VNALRPGLS 208
5|SequenceR|30|21|AASTLISALR
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 AASTLISALR 10
A+ TLI A+R
Sbjct: 845 ASVTLIEAIR 854
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 AASTLISALR 10
A+ TLI A+R
Sbjct: 846 ASVTLIEAIR 855
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 AASTLISALR 10
A+ TLI A+R
Sbjct: 845 ASVTLIEAIR 854
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 1 AASTLISALR 10
A+ TLI A+R
Sbjct: 845 ASVTLIEAIR 854
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 AASTLISALR 10
A+ TLI A+R
Sbjct: 846 ASVTLIEAIR 855
6|SequenceR|35|26|HNVLRAASTL
***** No hits found ******
7|SequenceR|40|31|HVYLTHNVLR
>sp|BTRF1_EBVA8|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 HVYLTHNVLR 10
H+YL H VL+
Sbjct: 258 HLYLKHVVLK 267
>sp|BTRF1_EBVG|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 HVYLTHNVLR 10
H+YL H VL+
Sbjct: 258 HLYLKHVVLK 267
>sp|BTRF1_EBVB9|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HVYLTHNVLR 10
H+YL H VL+
Sbjct: 258 HLYLKHVVLK 267
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 3 YLTHNVLR 10
++ HNVLR
Sbjct: 603 FVLHNVLR 610
>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P
Query: 1 HVYLTHNVLR 10
H++L H +LR
Sbjct: 259 HLFLKHVLLR 268
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 YLTHNVLR 10
YL NVLR
Sbjct: 109 YLLQNVLR 116
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 1 HVYLTHNVL 9
++L HNVL
Sbjct: 332 QIHLKHNVL 340
>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 1 HVYLTHNVL 9
++L HNVL
Sbjct: 332 QIHLKHNVL 340
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 HVYLTH 6
H+YL H
Sbjct: 244 HIYLNH 249
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 HVYLTH 6
H+YL H
Sbjct: 244 HIYLNH 249
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 HVYLTHN 7
+ Y+THN
Sbjct: 26 YAYVTHN 32
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 2 VYLTH 6
VYLTH
Sbjct: 466 VYLTH 470
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 2 VYLTH 6
VYLTH
Sbjct: 465 VYLTH 469
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 2 VYLTH 6
VYLTH
Sbjct: 466 VYLTH 470
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 2 VYLTHN 7
VYLT+N
Sbjct: 727 VYLTYN 732
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 HVYLTH 6
HV+L+H
Sbjct: 706 HVHLSH 711
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 1 HVYLTH 6
H+Y TH
Sbjct: 280 HIYKTH 285
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 VYLTHNV 8
VYL H+V
Sbjct: 1222 VYLNHSV 1228
8|SequenceR|45|36|MGPQLHVYLT
>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P
Query: 1 MGPQLHVY 8
+GP+LHVY
Sbjct: 282 LGPRLHVY 289
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 1 MGPQLHVYL 9
+GPQ+H Y+
Sbjct: 353 VGPQVHFYM 361
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 MGPQLHVYL 9
+GP H+Y+
Sbjct: 211 LGPNFHIYV 219
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 1 MGPQLHVYL 9
+GP++H Y+
Sbjct: 348 IGPKVHYYM 356
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 MGPQLHVYL 9
M P+L+VY+
Sbjct: 500 MAPELYVYV 508
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 1 MGPQLHVYL 9
M P L+VY+
Sbjct: 500 MAPDLYVYV 508
>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)
Query: 1 MGPQLHVY 8
+ P+LH Y
Sbjct: 74 LSPKLHFY 81
>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PQLHVY 8
PQLH Y
Sbjct: 71 PQLHAY 76
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 1 MGPQLHVYLT 10
+GP L+ YL+
Sbjct: 81 LGPDLNPYLS 90
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 GPQLHVY 8
GP +H+Y
Sbjct: 2419 GPVIHLY 2425
>sp|V073_ORFSA|PROTEIN ORFV073|Orf virus (strain Goat/Texas/SA00/2000) (OV-SA00)
Query: 1 MGPQLH 6
+GP LH
Sbjct: 20 LGPHLH 25
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GPQLHVYLT 10
GP+LH +T
Sbjct: 450 GPRLHCLVT 458
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GPQLHVYLT 10
GP+LH +T
Sbjct: 450 GPRLHCLVT 458
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 GPQLHVY 8
GP +H+Y
Sbjct: 2427 GPVIHLY 2433
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 GPQLHVY 8
GP +H+Y
Sbjct: 2457 GPIIHLY 2463
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 GPQLHVY 8
GP +H+Y
Sbjct: 2457 GPIIHLY 2463
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 GPQLHV 7
GP++HV
Sbjct: 1841 GPRIHV 1846
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 GPQLHV 7
GP++HV
Sbjct: 1842 GPRIHV 1847
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 GPQLHV 7
GP++HV
Sbjct: 1841 GPRIHV 1846
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 2 GPQLHV 7
GP++HV
Sbjct: 1841 GPRIHV 1846
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 GPQLHV 7
GP++HV
Sbjct: 1839 GPRIHV 1844
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 GPQLHVY 8
GP +H+Y
Sbjct: 1139 GPIVHLY 1145
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 GPQLHVY 8
GP +H+Y
Sbjct: 2470 GPIVHLY 2476
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 GPQLHVYL 9
GP HV++
Sbjct: 146 GPSEHVFI 153
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 QLHVYLT 10
+LH++LT
Sbjct: 3461 KLHIHLT 3467
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 MGPQLHV 7
MGP HV
Sbjct: 1906 MGPPAHV 1912
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 MGPQLHV 7
MGP HV
Sbjct: 1909 MGPPAHV 1915
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 5 LHVYLT 10
LH+YLT
Sbjct: 232 LHLYLT 237
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 LHVYLT 10
LH+YLT
Sbjct: 232 LHLYLT 237
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 GPQLHV 7
GP++HV
Sbjct: 1670 GPRVHV 1675
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 2 GPQLHVY 8
GP L++Y
Sbjct: 114 GPVLYIY 120
9|SequenceR|50|41|PGELSMGPQL
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 PGELSMGPQ 9
PGE + GP+
Sbjct: 50 PGEEASGPK 58
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 1 PGELSMGP 8
PG+L GP
Sbjct: 161 PGKLVAGP 168
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 1 PGELSMGP 8
PG+L GP
Sbjct: 161 PGKLVAGP 168
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 3 ELSMGPQL 10
+LS+GP L
Sbjct: 82 DLSLGPHL 89
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 PGELSMGPQ 9
P E GPQ
Sbjct: 14 PAETHSGPQ 22
10|SequenceR|55|46|SQPQAPGELS
>sp|75K_PAVHV|UNCHARACTERIZED protein 7.5K|Human parvovirus B19 (strain HV)
Query: 1 SQPQAPGEL 9
S PQAPG L
Sbjct: 39 SSPQAPGTL 47
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 SQPQAPG 7
+QP+APG
Sbjct: 55 TQPKAPG 61
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 1 SQPQAPGEL 9
+QPQAP L
Sbjct: 153 AQPQAPASL 161
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 2 QPQAPGEL 9
QP PGE
Sbjct: 328 QPSLPGEF 335
>sp|NP1_HBOC1|NON-STRUCTURAL protein NP-1|Primate bocaparvovirus 1 (strain Human
Query: 1 SQPQAPG 7
S P+APG
Sbjct: 100 SNPEAPG 106
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 1 SQPQAPG 7
S P APG
Sbjct: 143 STPSAPG 149
>sp|ICP22_HHV2|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (HHV-2) (Human
Query: 1 SQPQAPGELS 10
+QPQAP + S
Sbjct: 153 AQPQAPAQSS 162
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 2 QPQAPG 7
QP+APG
Sbjct: 598 QPEAPG 603
11|SequenceR|60|51|AQVPSSQPQA
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 4 PSSQP 8
PSSQP
Sbjct: 344 PSSQP 348
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 AQVPSSQPQA 10
A+VP P+A
Sbjct: 45 AKVPGLSPEA 54
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 AQVPSSQPQA 10
A+VP P+A
Sbjct: 45 AKVPGLSPEA 54
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 AQVPSSQPQA 10
A+VP P+A
Sbjct: 45 AKVPGLSPEA 54
12|SequenceR|65|56|LVEFTAQVPS
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 VEFTAQVPS 10
+EF A VP+
Sbjct: 1272 MEFPASVPA 1280
13|SequenceR|70|61|HTIFDLVEFT
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 HTIFDLVE 8
H++ DL+E
Sbjct: 2261 HSLLDLIE 2268
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2206 HTLFDM 2211
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 IFDLVEF 9
IFDL+E
Sbjct: 260 IFDLIEL 266
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2202 HTLFDM 2207
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2245 HTLFDM 2250
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2247 HTLFDM 2252
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2161 HTLFDM 2166
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2199 HTLFDM 2204
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 881 HTLFDM 886
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2212 HTLFDM 2217
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2245 HTLFDM 2250
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2245 HTLFDM 2250
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2246 HTLFDM 2251
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2169 HTLFDM 2174
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2199 HTLFDM 2204
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2228 HTLFDM 2233
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2228 HTLFDM 2233
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2234 HTLFDM 2239
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2220 HTLFDM 2225
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2229 HTLFDM 2234
Query: 1 HTIFDLVEF 9
HT DL+ F
Sbjct: 1793 HTSVDLITF 1801
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2209 HTLFDM 2214
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2206 HTLFDM 2211
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2206 HTLFDM 2211
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 HTIFDL 6
HT+FD+
Sbjct: 2143 HTLFDM 2148
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 IFDLVE 8
IFDL+E
Sbjct: 614 IFDLIE 619
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 2 TIFDLVEFT 10
TI+ L EFT
Sbjct: 289 TIYSLSEFT 297
>sp|G7_VARV|ASSEMBLY protein G7|Variola virus
Query: 2 TIFDLV 7
TIFD+V
Sbjct: 9 TIFDIV 14
>sp|G7_VAR67|ASSEMBLY protein G7|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 TIFDLV 7
TIFD+V
Sbjct: 9 TIFDIV 14
>sp|G7_VACCC|ASSEMBLY protein G7|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TIFDLV 7
TIFD+V
Sbjct: 9 TIFDIV 14
>sp|G7_VACCA|ASSEMBLY protein G7|Vaccinia virus (strain Ankara) (VACV)
Query: 2 TIFDLV 7
TIFD+V
Sbjct: 9 TIFDIV 14
14|SequenceR|75|66|AGAYLHTIFD
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 AGAYLH 6
+GAYLH
Sbjct: 519 SGAYLH 524
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 AGAYLH 6
+GAYLH
Sbjct: 519 SGAYLH 524
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 AGAYLH 6
+GAYLH
Sbjct: 519 SGAYLH 524
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 3 AYLHTI 8
AYLHT+
Sbjct: 390 AYLHTM 395
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 3 AYLHTI 8
AYLHT+
Sbjct: 386 AYLHTM 391
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 3 AYLHTI 8
AYLHT+
Sbjct: 386 AYLHTM 391
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 3 AYLHTI 8
AYLHT+
Sbjct: 389 AYLHTM 394
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 3 AYLHTI 8
AYLHT+
Sbjct: 386 AYLHTM 391
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 3 AYLHTI 8
AYLHT+
Sbjct: 395 AYLHTM 400
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 3 AYLHTI 8
AYLHT+
Sbjct: 390 AYLHTM 395
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 3 AYLHTI 8
AYLHT+
Sbjct: 388 AYLHTM 393
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 3 AYLHTI 8
AYLHT+
Sbjct: 417 AYLHTM 422
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 3 AYLHTI 8
AYLHT+
Sbjct: 418 AYLHTM 423
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 GAYLHTIFD 10
G +LH I+D
Sbjct: 1982 GDWLHDIWD 1990
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2201 IHTLFD 2206
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2244 IHTLFD 2249
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2246 IHTLFD 2251
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2198 IHTLFD 2203
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 880 IHTLFD 885
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2211 IHTLFD 2216
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2168 IHTLFD 2173
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2198 IHTLFD 2203
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2227 IHTLFD 2232
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2227 IHTLFD 2232
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2233 IHTLFD 2238
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2219 IHTLFD 2224
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2228 IHTLFD 2233
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2208 IHTLFD 2213
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2205 IHTLFD 2210
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2142 IHTLFD 2147
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 AYLHTIF 9
AY+HT +
Sbjct: 154 AYIHTTY 160
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 AYLHTIF 9
AY+HT +
Sbjct: 154 AYIHTTY 160
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2160 VHTLFD 2165
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2244 VHTLFD 2249
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2244 VHTLFD 2249
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2245 VHTLFD 2250
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2205 VHTLFD 2210
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 LHTIFD 10
+HT+FD
Sbjct: 2205 VHTLFD 2210
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 AGAYLHTIFD 10
AG++L I+D
Sbjct: 1977 AGSWLRDIWD 1986
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 3 AYLHTIF 9
+YL+T+F
Sbjct: 603 SYLYTVF 609
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 3 AYLHTIF 9
++LHT++
Sbjct: 29 SFLHTVY 35
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 AYLHTIF 9
++LHT++
Sbjct: 29 SFLHTVY 35
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 AYLHTIF 9
++LHT++
Sbjct: 29 SFLHTVY 35
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 AYLHTIF 9
++LHT++
Sbjct: 29 SFLHTVY 35
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 AGAYLH 6
AGAY H
Sbjct: 1017 AGAYQH 1022
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 3 AYLHTI 8
AY+HT+
Sbjct: 388 AYIHTM 393
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 3 AYLHTI 8
AY+HT+
Sbjct: 384 AYIHTM 389
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 3 AYLHTI 8
AY+HT+
Sbjct: 384 AYIHTM 389
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 3 AYLHTI 8
AY+HT+
Sbjct: 391 AYIHTM 396
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 3 AYLHTI 8
AY+HT+
Sbjct: 420 AYIHTM 425
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 3 AYLHTI 8
AY+HT+
Sbjct: 385 AYIHTM 390
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 3 AYLHTI 8
AY+HT+
Sbjct: 395 AYIHTM 400
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 GAYLHTI 8
G Y+H+I
Sbjct: 2229 GRYIHSI 2235
15|SequenceR|80|71|HRHVDAGAYL
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 RHVDAGA 8
RHV+AG+
Sbjct: 789 RHVNAGS 795
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 RHVDAGA 8
RHV+AG+
Sbjct: 789 RHVNAGS 795
>sp|VE6_HPV43|PROTEIN E6|Human papillomavirus 43
Query: 1 HRHVDAGAY 9
+RH D AY
Sbjct: 77 YRHFDYAAY 85
>sp|MATRX_HRSVB|MATRIX protein|Human respiratory syncytial virus B
Query: 4 VDAGAYL 10
VD GAYL
Sbjct: 224 VDLGAYL 230
>sp|MATRX_HRSVA|MATRIX protein|Human respiratory syncytial virus A
Query: 4 VDAGAYL 10
VD GAYL
Sbjct: 224 VDLGAYL 230
>sp|MATRX_HRSV|MATRIX protein|Human respiratory syncytial virus
Query: 4 VDAGAYL 10
VD GAYL
Sbjct: 224 VDLGAYL 230
>sp|MATRX_HRSS2|MATRIX protein|Human respiratory syncytial virus A
Query: 4 VDAGAYL 10
VD GAYL
Sbjct: 224 VDLGAYL 230
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 DAGAYL 10
DAGAY+
Sbjct: 1883 DAGAYI 1888
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 DAGAYL 10
DAGAY+
Sbjct: 1883 DAGAYI 1888
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 DAGAYL 10
DAGAY+
Sbjct: 1889 DAGAYI 1894
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 DAGAYL 10
DAGAY+
Sbjct: 1875 DAGAYI 1880
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RHVDAG 7
RHVD G
Sbjct: 1904 RHVDPG 1909
>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 HVDAGAYL 10
HVD +YL
Sbjct: 271 HVDTESYL 278
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 4 VDAGAYL 10
VDAG Y+
Sbjct: 970 VDAGTYV 976
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 4 VDAGAYL 10
VDAG Y+
Sbjct: 970 VDAGTYV 976
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 4 VDAGAYL 10
VDAG Y+
Sbjct: 970 VDAGTYV 976
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 4 VDAGAYL 10
VDAG Y+
Sbjct: 970 VDAGTYV 976
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 RHVDAGAYL 10
RH+ G Y+
Sbjct: 930 RHLSGGKYV 938
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 3 HVDAGAY 9
+VDAG Y
Sbjct: 34 YVDAGNY 40
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 HVDAGAYL 10
H D G Y+
Sbjct: 3666 HTDIGVYI 3673
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 HVDAGAYL 10
H D G Y+
Sbjct: 3666 HTDIGVYI 3673
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 HVDAGAYL 10
HV GA+L
Sbjct: 1537 HVTRGAFL 1544
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 HVDAGAYL 10
HV GA+L
Sbjct: 1537 HVTRGAFL 1544
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 HVDAGAYL 10
HV GA+L
Sbjct: 1537 HVTRGAFL 1544
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 HVDAGAYL 10
HV GA+L
Sbjct: 1537 HVTRGAFL 1544
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 HVDAGAYL 10
HV GA+L
Sbjct: 1537 HVTRGAFL 1544
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 HVDAGAYL 10
HV GA+L
Sbjct: 1537 HVTRGAFL 1544
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 HVDAGAYL 10
HV GA+L
Sbjct: 1537 HVTRGAFL 1544
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 HVDAGAYL 10
HV GA+L
Sbjct: 1537 HVTRGAFL 1544
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 HVDAGAYL 10
HV GA+L
Sbjct: 1537 HVTRGAFL 1544
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 HVDAGAYL 10
HV GA+L
Sbjct: 1531 HVTRGAFL 1538
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 HVDAGAYL 10
HV GA+L
Sbjct: 1521 HVTRGAFL 1528
>sp|MATRX_VSIVA|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 1 HRHVDAGAYL 10
H H + AYL
Sbjct: 132 HTHCEGRAYL 141
16|SequenceR|85|76|IRVDLHRHVD
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 IRVDLHRHV 9
+R+ HRH+
Sbjct: 456 VRIPTHRHI 464
>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11
Query: 3 VDLHRHV 9
+D+H+H+
Sbjct: 24 IDIHKHI 30
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 IRVDLHR 7
IR D+HR
Sbjct: 1503 IRADVHR 1509
>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b
Query: 4 DLHRHV 9
DLH+HV
Sbjct: 25 DLHKHV 30
>sp|VP7_ROTB2|OUTER capsid glycoprotein VP7|Rotavirus X (isolate
Query: 3 VDLHRHV 9
V LHRH+
Sbjct: 46 VKLHRHM 52
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 4 DLHRH 8
D+HRH
Sbjct: 204 DIHRH 208
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 4 DLHRH 8
D+HRH
Sbjct: 204 DIHRH 208
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 IRVDLHRHVD 10
I LHR++D
Sbjct: 1019 ISRKLHRYID 1028
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 IRVDLHRHVD 10
I LHR++D
Sbjct: 1019 ISRKLHRYID 1028
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 5 LHRHVD 10
LHR++D
Sbjct: 1023 LHRYID 1028
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 5 LHRHVD 10
LHR++D
Sbjct: 1024 LHRYID 1029
>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P
Query: 3 VDLHRHV 9
+DLH HV
Sbjct: 101 IDLHPHV 107
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 5 LHRHVD 10
LHR++D
Sbjct: 1024 LHRYID 1029
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 5 LHRHVD 10
LHR++D
Sbjct: 1024 LHRYID 1029
17|SequenceR|90|81|INTLLIRVDL
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 1 INTLLIRV 8
+NT LIRV
Sbjct: 105 VNTFLIRV 112
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 TLLIRVDL 10
TLL+ VDL
Sbjct: 187 TLLVAVDL 194
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 TLLIRVDL 10
TLL+ VDL
Sbjct: 187 TLLVAVDL 194
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 TLLIRVDL 10
TLL+ VDL
Sbjct: 187 TLLVAVDL 194
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 TLLIRVDL 10
TLL+ VDL
Sbjct: 187 TLLVAVDL 194
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 TLLIRVDL 10
TLL+ VDL
Sbjct: 187 TLLVAVDL 194
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 TLLIRVDL 10
TLL+ VDL
Sbjct: 187 TLLVAVDL 194
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 TLLIRVDL 10
TLL+ VDL
Sbjct: 187 TLLVAVDL 194
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 TLLIRVDL 10
TLL+ VDL
Sbjct: 187 TLLVAVDL 194
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 TLLIRVDL 10
TLL+ VDL
Sbjct: 187 TLLVAVDL 194
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 3 TLLIRVD 9
T+LIR+D
Sbjct: 832 TMLIRLD 838
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 TLLIRVD 9
TLL RVD
Sbjct: 323 TLLCRVD 329
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 TLLIRVD 9
TLL RVD
Sbjct: 323 TLLCRVD 329
18|SequenceR|95|86|TSKTRINTLL
***** No hits found ******
19|SequenceR|100|91|LPPLFTSKTR
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 2 PPLFTSK 8
PP+FT K
Sbjct: 447 PPVFTDK 453
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 2 PPLFTSKTR 10
PPL+T + R
Sbjct: 560 PPLYTQEKR 568
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 PPLFTSKT 9
PPLF++K
Sbjct: 467 PPLFSTKV 474
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 PPLFTSKT 9
PP FTS +
Sbjct: 661 PPHFTSNS 668
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 PPLFTSKT 9
PPLF++K
Sbjct: 467 PPLFSTKV 474
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 PPLFTSK 8
PPLF++K
Sbjct: 467 PPLFSTK 473
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 PPLFTSK 8
PPLF++K
Sbjct: 467 PPLFSTK 473
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 PPLFTSK 8
PPLF++K
Sbjct: 468 PPLFSTK 474
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 PPLFTSK 8
PPLF++K
Sbjct: 468 PPLFSTK 474
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 LFTSKTR 10
L+T+KTR
Sbjct: 316 LYTTKTR 322
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 PPLFT 6
PP+FT
Sbjct: 1424 PPIFT 1428
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 PPLFT 6
PP+FT
Sbjct: 1424 PPIFT 1428
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 PPLFT 6
PP+FT
Sbjct: 1424 PPIFT 1428
20|SequenceR|105|96|QVSTPLPPLF
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 5 PLPPL 9
P+PPL
Sbjct: 196 PIPPL 200
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 5 PLPPL 9
P+PPL
Sbjct: 196 PIPPL 200
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 PLPPL 9
P+PPL
Sbjct: 196 PIPPL 200
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 5 PLPPL 9
P+PPL
Sbjct: 196 PIPPL 200
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 5 PLPPL 9
P+PPL
Sbjct: 196 PIPPL 200
>sp|REV_HV2EH|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 QVSTPLPPLF 10
Q ST +PP++
Sbjct: 93 QASTCIPPIW 102
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VSTPLPPL 9
++PLPPL
Sbjct: 528 AASPLPPL 535
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 STPLPPL 9
++PLPPL
Sbjct: 529 ASPLPPL 535
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 5 PLPPLF 10
PLPP F
Sbjct: 388 PLPPFF 393
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 VSTPLPP 8
+STP PP
Sbjct: 351 LSTPSPP 357
>sp|NEC1_HCMVM|NUCLEAR egress protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 TPLPPLF 10
+P PPLF
Sbjct: 363 SPPPPLF 369
>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 TPLPPLF 10
+P PPLF
Sbjct: 363 SPPPPLF 369
21|SequenceR|110|101|PHALNQVSTP
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 PHALNQVST 9
PHA N+V T
Sbjct: 282 PHAKNRVGT 290
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 HALNQVSTP 10
HAL QV TP
Sbjct: 709 HALLQVGTP 717
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 HALNQV 7
HALNQV
Sbjct: 725 HALNQV 730
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 HALNQV 7
HALNQV
Sbjct: 727 HALNQV 732
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 HALNQV 7
HALNQV
Sbjct: 727 HALNQV 732
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 HALNQV 7
HALNQV
Sbjct: 728 HALNQV 733
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 HALNQV 7
HALNQV
Sbjct: 725 HALNQV 730
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 HALNQV 7
HALNQV
Sbjct: 728 HALNQV 733
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 2 HALNQVSTP 10
HA Q+S+P
Sbjct: 288 HAAKQLSSP 296
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PHALNQVST 9
P ALN+++T
Sbjct: 1629 PRALNRLAT 1637
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PHALNQVST 9
P ALN+++T
Sbjct: 1629 PRALNRLAT 1637
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PHALNQVST 9
P ALN+++T
Sbjct: 1629 PRALNRLAT 1637
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 PHALNQVS 8
PH LN+V+
Sbjct: 2896 PHELNRVA 2903
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PHALNQVST 9
P ALN+++T
Sbjct: 1627 PRALNRLAT 1635
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PHALNQVST 9
P ALN+++T
Sbjct: 1629 PRALNRLAT 1637
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PHALNQVST 9
P ALN+++T
Sbjct: 1463 PRALNRLAT 1471
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PHALNQVST 9
P ALN+++T
Sbjct: 1629 PRALNRLAT 1637
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PHALNQVST 9
P ALN+++T
Sbjct: 1629 PRALNRLAT 1637
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PHALNQVST 9
P ALN+++T
Sbjct: 1629 PRALNRLAT 1637
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PHALNQVST 9
P ALN+++T
Sbjct: 1629 PRALNRLAT 1637
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 2 HALNQVSTP 10
HALN +TP
Sbjct: 148 HALNNDNTP 156
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 2 HALNQVSTP 10
HALN +TP
Sbjct: 148 HALNNDNTP 156
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 NQVSTP 10
N+VSTP
Sbjct: 20 NRVSTP 25
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 NQVSTP 10
N+VSTP
Sbjct: 20 NRVSTP 25
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 NQVSTP 10
N+VSTP
Sbjct: 20 NRVSTP 25
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 NQVSTP 10
N+VSTP
Sbjct: 20 NRVSTP 25
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 NQVSTP 10
N+VSTP
Sbjct: 20 NRVSTP 25
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 3 ALNQVSTP 10
ALN ++TP
Sbjct: 366 ALNSIATP 373
22|SequenceR|115|106|LVVEPPHALN
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 EPPHA 8
EPPHA
Sbjct: 520 EPPHA 524
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 EPPHA 8
EPPHA
Sbjct: 520 EPPHA 524
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 EPPHA 8
EPPHA
Sbjct: 520 EPPHA 524
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 EPPHA 8
EPPHA
Sbjct: 520 EPPHA 524
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 EPPHA 8
EPPHA
Sbjct: 520 EPPHA 524
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 EPPHA 8
EPPHA
Sbjct: 520 EPPHA 524
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 EPPHA 8
EPPHA
Sbjct: 520 EPPHA 524
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 EPPHA 8
EPPHA
Sbjct: 520 EPPHA 524
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 4 EPPHA 8
EPPHA
Sbjct: 520 EPPHA 524
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 EPPHA 8
EPPHA
Sbjct: 520 EPPHA 524
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 VVEPPHAL 9
++EP HAL
Sbjct: 3048 IMEPEHAL 3055
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 VVEPPHAL 9
++EP HAL
Sbjct: 3047 IMEPEHAL 3054
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 VVEPPHAL 9
++EP HAL
Sbjct: 3048 IMEPEHAL 3055
>sp|E1BS_ADE41|E1B protein, small T-antigen|Human adenovirus F serotype 41
Query: 4 EPPHALN 10
+PPH L+
Sbjct: 139 QPPHGLD 145
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 EPPHALN 10
EPP ALN
Sbjct: 888 EPPAALN 894
>sp|M21_HRSVA|PROTEIN M2-1|Human respiratory syncytial virus A
Query: 5 PPHAL 9
PPHAL
Sbjct: 31 PPHAL 35
>sp|M21_HRSVB|PROTEIN M2-1|Human respiratory syncytial virus B
Query: 5 PPHAL 9
PPHAL
Sbjct: 31 PPHAL 35
>sp|M21_HRSV|PROTEIN M2-1|Human respiratory syncytial virus
Query: 5 PPHAL 9
PPHAL
Sbjct: 31 PPHAL 35
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 LVVEPP 6
+V+EPP
Sbjct: 301 MVIEPP 306
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 1 LVVEPP 6
+V+EPP
Sbjct: 298 MVIEPP 303
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 5 PPHAL 9
PPHA+
Sbjct: 524 PPHAV 528
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 LVVEPP 6
+++EPP
Sbjct: 298 MIIEPP 303
>sp|VE7_HPV68|PROTEIN E7|Human papillomavirus 68
Query: 2 VVEPPHALN 10
+ EP HA+N
Sbjct: 39 IDEPDHAVN 47
>sp|VE7_HPV39|PROTEIN E7|Human papillomavirus 39
Query: 2 VVEPPHALN 10
+ EP HA+N
Sbjct: 39 IDEPDHAVN 47
>sp|VE7_HPVME|PROTEIN E7|Human papillomavirus type ME180
Query: 2 VVEPPHALN 10
+ EP HA+N
Sbjct: 39 IDEPDHAVN 47
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 2 VVEPPHALN 10
++EP +A+N
Sbjct: 317 LIEPVNAIN 325
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VVEPPHALN 10
++EP +A+N
Sbjct: 317 LIEPVNAIN 325
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 VVEPPHALN 10
++EP +A+N
Sbjct: 317 LIEPVNAIN 325
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 2 VVEPPHALN 10
++EP +A+N
Sbjct: 317 LIEPVNAIN 325
23|SequenceR|120|111|TQFDTLVVEP
>sp|VEMP_MERS1|ENVELOPE small membrane protein|Middle East respiratory syndrome-related
Query: 1 TQFDTLVVEP 10
T F+TL+V+P
Sbjct: 45 TGFNTLLVQP 54
>sp|PG036_VARV|PROTEIN OPG036|Variola virus
Query: 1 TQFDTLVVEP 10
T++DT V+P
Sbjct: 120 TRYDTFKVDP 129
>sp|PG036_VAR67|PROTEIN OPG036|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 TQFDTLVVEP 10
T++DT V+P
Sbjct: 120 TRYDTFKVDP 129
>sp|A57_VACCC|GUANYLATE kinase homolog|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 FDTLVVE 9
FDT+++E
Sbjct: 120 FDTIIIE 126
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 TQFDTLVVEP 10
T DT+ ++P
Sbjct: 2424 TDIDTMTIDP 2433
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 TQFDTLVVEP 10
T DT+ ++P
Sbjct: 2424 TDIDTMTIDP 2433
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 TQFDTLVVEP 10
T DT+ ++P
Sbjct: 2420 TDIDTMTIDP 2429
>sp|PG036_MONPV|PROTEIN OPG036|Monkeypox virus (MPXV)
Query: 1 TQFDTLVVEP 10
T++DT V P
Sbjct: 120 TRYDTFKVNP 129
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 TQFDTLVVEP 10
T F T++V P
Sbjct: 1151 TSFKTVLVSP 1160
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 TQFDTLVVEP 10
T F T++V P
Sbjct: 1151 TSFKTVLVSP 1160
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 QFDTLVVEP 10
+FD +VV P
Sbjct: 729 KFDCVVVNP 737
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 3 FDTLVVE 9
FDT+VV+
Sbjct: 430 FDTIVVD 436
>sp|PG036_VACCC|PROTEIN OPG036|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TQFDTLVVEP 10
T +DT V+P
Sbjct: 120 TPYDTFKVDP 129
24|SequenceR|125|116|QSGDLTQFDT
>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain
Query: 2 SGDLTQF 8
SGD+TQF
Sbjct: 89 SGDITQF 95
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 3 GDLTQFDT 10
GDL Q+D+
Sbjct: 388 GDLKQYDS 395
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 3 GDLTQFDT 10
GDL Q+D+
Sbjct: 388 GDLKQYDS 395
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 3 GDLTQFDT 10
GDL Q+D+
Sbjct: 388 GDLKQYDS 395
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 3 GDLTQFDT 10
GDL Q+D+
Sbjct: 388 GDLKQYDS 395
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 GDLTQFDT 10
GDL Q+D+
Sbjct: 388 GDLKQYDS 395
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 3 GDLTQFDT 10
GDL Q+D+
Sbjct: 388 GDLKQYDS 395
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 3 GDLTQFDT 10
GDL Q+D+
Sbjct: 388 GDLKQYDS 395
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 3 GDLTQFDT 10
GDL Q+D+
Sbjct: 388 GDLKQYDS 395
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 3 GDLTQFDT 10
GDL Q+D+
Sbjct: 388 GDLKQYDS 395
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 QSGDLTQF 8
Q+G+ TQF
Sbjct: 1151 QAGEFTQF 1158
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster
Query: 1 QSGDLTQ 7
QSG LTQ
Sbjct: 26 QSGQLTQ 32
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster
Query: 1 QSGDLTQ 7
QSG LTQ
Sbjct: 26 QSGQLTQ 32
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 SGDLTQFD 9
SG+L +FD
Sbjct: 1524 SGNLIKFD 1531
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 SGDLTQFD 9
SG+L +FD
Sbjct: 1524 SGNLIKFD 1531
>sp|VE6_HPV24|PROTEIN E6|Human papillomavirus 24
Query: 4 DLTQFDT 10
+LT FDT
Sbjct: 39 ELTDFDT 45
25|SequenceR|130|121|KVPNYQSGDL
>sp|VP2_POVJC|MINOR capsid protein VP2|JC polyomavirus (JCPyV) (JCV)
Query: 1 KVPNYQSGDL 10
K PN QSG+
Sbjct: 267 KTPNVQSGEF 276
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 KVPNYQ 6
+VPNYQ
Sbjct: 1774 RVPNYQ 1779
>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)
Query: 1 KVPNYQSGDL 10
K+P Y+ GD+
Sbjct: 131 KIPIYKRGDM 140
>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)
Query: 1 KVPNYQSGDL 10
K+P Y+ GD+
Sbjct: 131 KIPIYKRGDM 140
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PNYQSGD 9
PNY GD
Sbjct: 654 PNYPKGD 660
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 VPNYQSGDL 10
+ NY++GD+
Sbjct: 175 IENYRAGDV 183
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 KVPNY 5
KVPNY
Sbjct: 1772 KVPNY 1776
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 1 KVPNYQSGDL 10
K+PNY DL
Sbjct: 1046 KLPNYTVPDL 1055
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 3 PNYQSGD 9
PNY GD
Sbjct: 654 PNYPKGD 660
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 KVPNYQ 6
K+PNY+
Sbjct: 900 KIPNYK 905
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 3 PNYQSGDL 10
PNY G+L
Sbjct: 195 PNYHPGNL 202
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 5 YQSGD 9
YQSGD
Sbjct: 277 YQSGD 281
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 VPNYQSGDL 10
+P++ GDL
Sbjct: 209 IPSHAQGDL 217
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 5 YQSGD 9
YQSGD
Sbjct: 277 YQSGD 281
>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain
Query: 3 PNYQSG 8
P YQSG
Sbjct: 192 PQYQSG 197
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 1 KVPNYQS 7
K+PNY S
Sbjct: 391 KIPNYGS 397
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 PNYQSGD 9
PN SGD
Sbjct: 141 PNNNSGD 147
>sp|NP03_HHV1F|NUCLEAR phosphoprotein UL3|Human herpesvirus 1 (strain F)
Query: 3 PNYQSG 8
PN++SG
Sbjct: 37 PNHESG 42
>sp|NP03_HHV11|NUCLEAR phosphoprotein UL3|Human herpesvirus 1 (strain 17)
Query: 3 PNYQSG 8
PN++SG
Sbjct: 37 PNHESG 42
26|SequenceR|135|126|RVLQQKVPNY
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 RVLQQKVPNY 10
R L QK+PNY
Sbjct: 895 RALIQKIPNY 904
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 5 QKVPNY 10
Q+VPNY
Sbjct: 1772 QRVPNY 1777
>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)
Query: 1 RVLQQKVPN 9
RVL +KVP+
Sbjct: 72 RVLARKVPD 80
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 RVLQQKVP 8
R +QQK+P
Sbjct: 1268 RNIQQKLP 1275
27|SequenceR|140|131|CSTAYRVLQQ
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 CSTAYRVLQ 9
CS +Y+VL+
Sbjct: 69 CSRSYKVLK 77
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 CSTAYRVLQ 9
CS +Y+VL+
Sbjct: 69 CSRSYKVLK 77
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 CSTAYRVLQ 9
CS +Y+VL+
Sbjct: 69 CSRSYKVLK 77
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 CSTAYRVLQ 9
CS +Y+VL+
Sbjct: 69 CSRSYKVLK 77
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 CSTAYRVLQ 9
CS +Y+VL+
Sbjct: 69 CSRSYKVLK 77
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 CSTAYRVLQ 9
CS ++RVL+
Sbjct: 69 CSRSFRVLK 77
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 CSTAYRVLQ 9
CS ++RVL+
Sbjct: 69 CSRSFRVLK 77
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 CSTAYRVLQ 9
CS ++RVL+
Sbjct: 69 CSRSFRVLK 77
>sp|PG132_VARV|VIRION morphogenesis protein OPG132|Variola virus
Query: 2 STAYRVLQQ 10
+ AY+VLQQ
Sbjct: 152 NAAYQVLQQ 160
>sp|PG132_VAR67|VIRION morphogenesis protein OPG132|Variola virus (isolate
Query: 2 STAYRVLQQ 10
+ AY+VLQQ
Sbjct: 152 NAAYQVLQQ 160
>sp|PG132_VACCC|VIRION morphogenesis protein OPG132|Vaccinia virus (strain Copenhagen)
Query: 2 STAYRVLQQ 10
+ AY+VLQQ
Sbjct: 152 NAAYQVLQQ 160
>sp|PG132_MONPV|VIRION morphogenesis protein OPG132|Monkeypox virus (MPXV)
Query: 2 STAYRVLQQ 10
+ AY+VLQQ
Sbjct: 152 NAAYQVLQQ 160
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 CSTAYRVL 8
CS A+R L
Sbjct: 595 CSKAFRFL 602
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 1 CSTAYRVLQ 9
CS YR L+
Sbjct: 174 CSALYRYLR 182
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 1 CSTAYRVLQ 9
CS YR L+
Sbjct: 174 CSALYRYLR 182
>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)
Query: 1 CSTAYRVLQ 9
CS YR L+
Sbjct: 176 CSALYRYLR 184
>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)
Query: 1 CSTAYRVLQ 9
CS YR L+
Sbjct: 176 CSALYRYLR 184
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 TAYRVLQQ 10
T YR++QQ
Sbjct: 505 THYRLVQQ 512
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 TAYRVLQQ 10
T YR++QQ
Sbjct: 504 THYRLVQQ 511
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 TAYRVLQQ 10
T YR++QQ
Sbjct: 506 THYRMVQQ 513
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 TAYRVLQQ 10
T YR++QQ
Sbjct: 504 THYRLVQQ 511
>sp|UL126_HCMVA|UNCHARACTERIZED protein UL126|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 STAYRV 7
STAYRV
Sbjct: 102 STAYRV 107
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 CSTAYRVL 8
C+T+ RVL
Sbjct: 62 CATSTRVL 69
28|SequenceR|145|136|PCCSYCSTAY
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 2 CCSYCSTAY 10
CC +C A+
Sbjct: 233 CCDWCIAAF 241
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 PCCSYCST 8
PC YC T
Sbjct: 332 PCSDYCLT 339
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 CSYCST 8
C YCS+
Sbjct: 1959 CKYCSS 1964
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 CSYCST 8
C YCS+
Sbjct: 1959 CKYCSS 1964
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 CSYCST 8
C YCS+
Sbjct: 1959 CKYCSS 1964
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 3 CSYCSTA 9
CSY STA
Sbjct: 200 CSYNSTA 206
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 2 CCSYCSTAY 10
CC STAY
Sbjct: 185 CCLPVSTAY 193
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 CCSYCSTAY 10
CC STAY
Sbjct: 185 CCLPVSTAY 193
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 CCSYCSTAY 10
CC STAY
Sbjct: 185 CCLPVSTAY 193
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 2 CCSYCSTAY 10
CC STAY
Sbjct: 185 CCLPVSTAY 193
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CCSYCSTAY 10
CC STAY
Sbjct: 185 CCLPVSTAY 193
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 2 CCSYCSTAY 10
CC STAY
Sbjct: 185 CCLPVSTAY 193
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 CCSYC 6
CC +C
Sbjct: 45 CCMFC 49
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 2 CCSYC 6
CC +C
Sbjct: 45 CCMFC 49
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 CCSYCS 7
CC CS
Sbjct: 1101 CCRSCS 1106
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 CCSYCS 7
CC CS
Sbjct: 1106 CCRSCS 1111
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 CCSYCS 7
CC CS
Sbjct: 1106 CCRSCS 1111
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 CCSYCS 7
CC CS
Sbjct: 1106 CCRSCS 1111
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 CCSYCS 7
CC CS
Sbjct: 1106 CCRSCS 1111
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 2 CCSYC 6
CC +C
Sbjct: 45 CCMFC 49
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 CCSYCS 7
CC CS
Sbjct: 1034 CCRSCS 1039
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 PCCSYCS 7
P C +C+
Sbjct: 282 PSCPFCA 288
>sp|E434_ADE02|EARLY 4 ORF6 protein|Human adenovirus C serotype 2
Query: 2 CCSYCS 7
CCSYC+
Sbjct: 223 CCSYCA 228
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 CSYCST 8
C++CS+
Sbjct: 288 CAFCSS 293
>sp|E434_ADE12|EARLY E4 34 kDa protein|Human adenovirus A serotype 12
Query: 2 CCSYC 6
CC YC
Sbjct: 213 CCDYC 217
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 CCSYCS 7
CC CS
Sbjct: 1106 CCRSCS 1111
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 CCSYCS 7
CC CS
Sbjct: 1106 CCRSCS 1111
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 CCSYCS 7
CC CS
Sbjct: 1106 CCRSCS 1111
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 CCSYCS 7
CC CS
Sbjct: 1106 CCRSCS 1111
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 PCCSYC 6
PC S C
Sbjct: 660 PCASVC 665
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 3 CSYCSTAY 10
CSY T Y
Sbjct: 793 CSYSLTKY 800
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CSYCS 7
C YCS
Sbjct: 69 CFYCS 73
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CSYCS 7
C YCS
Sbjct: 69 CFYCS 73
>sp|VE6_HPV94|PROTEIN E6|Human papillomavirus type 94
Query: 2 CCSYCST 8
CC+YC T
Sbjct: 134 CCAYCWT 140
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PCCSYCST 8
PC YC T
Sbjct: 333 PCSDYCLT 340
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 PCCSYCST 8
PC YC T
Sbjct: 332 PCSDYCLT 339
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 PCCSYCST 8
PC YC T
Sbjct: 332 PCSDYCLT 339
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PCCSYCST 8
PC YC T
Sbjct: 333 PCSDYCLT 340
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PCCSYCST 8
PC YC T
Sbjct: 333 PCSDYCLT 340
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PCCSYCST 8
PC YC T
Sbjct: 333 PCSDYCLT 340
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PCCSYCST 8
PC YC T
Sbjct: 333 PCSDYCLT 340
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PCCSYCST 8
PC YC T
Sbjct: 328 PCSDYCLT 335
29|SequenceR|150|141|VSALRPCCSY
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 3 ALRPCCSY 10
ALRP CSY
Sbjct: 164 ALRPDCSY 171
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 6 PCCSY 10
PCCS+
Sbjct: 552 PCCSF 556
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 6 PCCSY 10
PCCS+
Sbjct: 537 PCCSF 541
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 3 ALRPC 7
ALRPC
Sbjct: 380 ALRPC 384
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 1 VSALRPCCS 9
+SA++P CS
Sbjct: 602 ISAIKPDCS 610
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 3 ALRPCCSY 10
ALRP C Y
Sbjct: 178 ALRPDCKY 185
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 VSALRPCCS 9
V +R CCS
Sbjct: 2708 VGCVRKCCS 2716
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 VSALRPCCS 9
V +R CCS
Sbjct: 2678 VGCVRKCCS 2686
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 VSALRPCCS 9
V +R CCS
Sbjct: 2658 VGCVRKCCS 2666
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 3 ALRPCCSY 10
ALRP C Y
Sbjct: 179 ALRPDCKY 186
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 VSALRPCCS 9
V +R CCS
Sbjct: 2708 VGCVRKCCS 2716
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 VSALRPCCS 9
V +R CCS
Sbjct: 2678 VGCVRKCCS 2686
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 VSALRPCCS 9
V +R CCS
Sbjct: 2658 VGCVRKCCS 2666
>sp|CEP3_HHV11|CYTOPLASMIC envelopment protein 3|Human herpesvirus 1 (strain 17)
Query: 2 SALRPCC 8
S RPCC
Sbjct: 6 SGARPCC 12
>sp|CEP3_HHV1K|CYTOPLASMIC envelopment protein 3|Human herpesvirus 1 (strain KOS)
Query: 2 SALRPCC 8
S RPCC
Sbjct: 6 SGARPCC 12
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 5 RPCCSY 10
R CC Y
Sbjct: 2098 RVCCDY 2103
>sp|CEP3_HHV2H|CYTOPLASMIC envelopment protein 3|Human herpesvirus 2 (strain HG52)
Query: 2 SALRPCC 8
S RPCC
Sbjct: 6 SGARPCC 12
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 VSALRPCC 8
VSA RP C
Sbjct: 1296 VSAARPDC 1303
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 VSALRPCC 8
VSA RP C
Sbjct: 1296 VSAARPEC 1303
>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 LRPCCSY 10
+RP C+Y
Sbjct: 129 VRPRCNY 135
>sp|E316_ADE03|EARLY E3 16 kDa glycoprotein|Human adenovirus B serotype 3
Query: 6 PCCSY 10
PCC+Y
Sbjct: 128 PCCAY 132
>sp|PG181_VACCA|PROTEIN OPG181|Vaccinia virus (strain Ankara) (VACV)
Query: 4 LRPCC 8
++PCC
Sbjct: 28 IKPCC 32
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 4 LRPCC 8
++PCC
Sbjct: 28 IKPCC 32
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 LRPCC 8
++PCC
Sbjct: 28 IKPCC 32
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 ALRPC 7
ALRPC
Sbjct: 490 ALRPC 494
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 LRPCCSY 10
+RP C Y
Sbjct: 706 IRPACPY 712
>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LRPCC 8
++PCC
Sbjct: 28 IKPCC 32
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 LRPCCSY 10
+RP C Y
Sbjct: 706 IRPACPY 712
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 LRPCCSY 10
+RP C Y
Sbjct: 706 IRPACPY 712
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 LRPCCSY 10
+RP C Y
Sbjct: 706 IRPACPY 712
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 4 LRPCCSY 10
+RP C Y
Sbjct: 706 IRPACPY 712
>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)
Query: 4 LRPCC 8
++PCC
Sbjct: 28 IKPCC 32
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 RPCCSY 10
RP CS+
Sbjct: 5386 RPVCSF 5391
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VSALRPCCSY 10
+S L P C +
Sbjct: 163 ISLLHPICQH 172
30|SequenceR|155|146|DSYLLVSALR
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 SYLLVSALR 10
SY++ SALR
Sbjct: 331 SYVVSSALR 339
31|SequenceR|160|151|EGIGYDSYLL
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 EGIGYDSYLL 10
E +G D YLL
Sbjct: 2210 EDLGVDQYLL 2219
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 EGIGYDSY 8
E GYD+Y
Sbjct: 117 EVFGYDAY 124
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 EGIGYDSY 8
E GYD+Y
Sbjct: 117 EVFGYDAY 124
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 EGIGYDSY 8
E GYD+Y
Sbjct: 117 EVFGYDAY 124
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 2 GIGYDSY 8
G GYD Y
Sbjct: 692 GSGYDPY 698
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 2 GIGYDSY 8
G GYD Y
Sbjct: 708 GSGYDPY 714
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 2 GIGYDS 7
GIGY+S
Sbjct: 102 GIGYES 107
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 2 GIGYDS 7
GIGY+S
Sbjct: 102 GIGYES 107
>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P
Query: 1 EGIGYDSY 8
EG+G+D +
Sbjct: 160 EGLGWDWF 167
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 EGIGYDSYL 9
EGI YD L
Sbjct: 1458 EGIIYDKVL 1466
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 2 GIGYDS 7
GIGY+S
Sbjct: 104 GIGYES 109
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 1 EGIGYDSYL 9
+G+G+ YL
Sbjct: 29 DGVGFMGYL 37
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 1 EGIGYDSYL 9
+G+G+ YL
Sbjct: 29 DGVGFMGYL 37
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 1 EGIGYDSYLL 10
G+G D Y+L
Sbjct: 31 HGLGVDCYVL 40
>sp|NCAP_BUNLC|NUCLEOPROTEIN La Crosse
Query: 2 GIGYDS 7
G+G+DS
Sbjct: 132 GVGWDS 137
>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United
Query: 2 GIGYDS 7
G+G+DS
Sbjct: 132 GVGWDS 137
32|SequenceR|165|156|PEVPVEGIGY
>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65
Query: 1 PEVPVEGIG 9
P VPVEG+G
Sbjct: 87 PTVPVEGLG 95
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 3 VPVEGIGY 10
VPVEG+ Y
Sbjct: 644 VPVEGVEY 651
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 PEVPVEGIG 9
PE PV+ I
Sbjct: 326 PETPVQAIA 334
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 PEVPVEGI 8
P+VP++G+
Sbjct: 491 PDVPIQGL 498
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 PEVPVEGIGY 10
PEV +G G+
Sbjct: 2675 PEVIAQGFGF 2684
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 PEVPVEGIGY 10
PEV +G G+
Sbjct: 2675 PEVIAQGFGF 2684
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PEVPVEGIGY 10
PE PVE Y
Sbjct: 145 PETPVEYAEY 154
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PEVPVEGIGY 10
PE PVE Y
Sbjct: 145 PETPVEYAEY 154
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PEVPVEGIGY 10
PE PVE Y
Sbjct: 145 PETPVEYAEY 154
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 PEVPVEGIG 9
PE PV+ +
Sbjct: 326 PETPVQALA 334
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PEVPVEGIGY 10
PE + G+GY
Sbjct: 254 PEYILYGLGY 263
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 1 PEVPVEGIGY 10
PE + G+GY
Sbjct: 254 PEYILYGLGY 263
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 PEVPVE 6
P VPVE
Sbjct: 1803 PRVPVE 1808
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 PEVPVE 6
P VPVE
Sbjct: 1803 PRVPVE 1808
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 4 PVEGIGY 10
P+ GI Y
Sbjct: 371 PINGISY 377
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 PVEGIGY 10
P+ GI Y
Sbjct: 371 PINGISY 377
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PVEGIGY 10
P+ GI Y
Sbjct: 371 PINGISY 377
33|SequenceR|170|161|LPVDLPEVPV
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 2 PVDLPEVPV 10
PVD P VP+
Sbjct: 428 PVDHPHVPI 436
>sp|NEF_HV2UC|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 LPVDLPE 7
+PVD+PE
Sbjct: 160 VPVDIPE 166
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 LPEVPV 10
LPEVP+
Sbjct: 737 LPEVPI 742
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 VDLPEVP 9
V LPE+P
Sbjct: 681 VSLPEIP 687
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PVDLPEV 8
P+DLPE+
Sbjct: 2876 PLDLPEI 2882
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 VDLPEVPV 10
V+LP VP+
Sbjct: 49 VELPPVPI 56
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PVDLPEV 8
P+DLPE+
Sbjct: 2876 PLDLPEI 2882
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 4 DLPEVP 9
+LPEVP
Sbjct: 273 ELPEVP 278
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 4 DLPEVP 9
+LPEVP
Sbjct: 273 ELPEVP 278
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 4 DLPEVP 9
+LPEVP
Sbjct: 273 ELPEVP 278
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 4 DLPEVP 9
+LPEVP
Sbjct: 273 ELPEVP 278
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 4 DLPEVP 9
+LPEVP
Sbjct: 273 ELPEVP 278
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 LPVDLP 6
+P+DLP
Sbjct: 1618 IPIDLP 1623
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LPVDLPEVPV 10
+P+ LP++P+
Sbjct: 485 VPICLPQIPL 494
>sp|UL135_HCMVM|PROTEIN UL135|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LPVDLPEVP 9
LP+D PE P
Sbjct: 101 LPIDKPEFP 109
>sp|UL135_HCMVT|PROTEIN UL135|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 LPVDLPEVP 9
LP+D PE P
Sbjct: 101 LPIDKPEFP 109
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 3 VDLPEVPV 10
V+LP VP+
Sbjct: 44 VELPPVPL 51
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 3 VDLPEVPV 10
V+LP +P+
Sbjct: 49 VELPSLPI 56
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 3 VDLPEVPV 10
V+LP +P+
Sbjct: 49 VELPSLPI 56
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 VDLPEVPV 10
V+LP +P+
Sbjct: 49 VELPSLPI 56
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 PVDLPEV 8
P D+PE+
Sbjct: 1711 PEDIPEI 1717
>sp|NEF_HV2KR|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 LPVDLPE 7
+PVD+P+
Sbjct: 178 VPVDVPQ 184
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PVDLPEV 8
P+DLP++
Sbjct: 2875 PLDLPQI 2881
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PVDLPEV 8
P+DLP++
Sbjct: 2875 PLDLPQI 2881
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PVDLPEV 8
P+DLP++
Sbjct: 2875 PLDLPQI 2881
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 1 LPVDLPEVPV 10
+PV P++P+
Sbjct: 516 MPVLAPQIPI 525
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PVDLPEV 8
P+DLP++
Sbjct: 2875 PLDLPQI 2881
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PVDLPEV 8
P+DLP++
Sbjct: 2875 PLDLPQI 2881
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 PVDLPEV 8
P+DLP++
Sbjct: 2887 PLDLPQI 2893
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PVDLPEV 8
P+DLP++
Sbjct: 2875 PLDLPQI 2881
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PVDLPEV 8
P+DLP++
Sbjct: 2875 PLDLPQI 2881
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 4 DLPEVP 9
+LPE+P
Sbjct: 293 NLPEIP 298
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 DLPEVP 9
+LPE+P
Sbjct: 293 NLPEIP 298
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 LPVDLPE 7
+PVD+P+
Sbjct: 178 VPVDVPQ 184
>sp|NEF_HV2ST|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 LPVDLPE 7
+PVD+P+
Sbjct: 177 VPVDVPQ 183
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 1 LPVDLPEVPV 10
LPV + +PV
Sbjct: 286 LPVSIVSLPV 295
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 4 DLPEVP 9
+LPE+P
Sbjct: 293 NLPEIP 298
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PVDLPE 7
P++LPE
Sbjct: 827 PINLPE 832
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LPVDLPEVPV 10
L V LP++P+
Sbjct: 483 LSVCLPQIPL 492
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 4 DLPEVP 9
+LPE+P
Sbjct: 293 NLPEIP 298
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 DLPEVP 9
+LPE+P
Sbjct: 293 NLPEIP 298
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 4 DLPEVP 9
+LPE+P
Sbjct: 293 NLPEIP 298
34|SequenceR|175|166|RITSPLPVDL
>sp|SPI1_VARV|SERINE proteinase inhibitor 1|Variola virus
Query: 2 ITSPLPVD 9
+TSPLP++
Sbjct: 146 LTSPLPIN 153
>sp|SPI1_VAR67|SERINE proteinase inhibitor 1|Variola virus (isolate
Query: 2 ITSPLPVD 9
+TSPLP++
Sbjct: 146 LTSPLPIN 153
>sp|SPI1_CWPXB|SERINE proteinase inhibitor 1|Cowpox virus (strain Brighton Red)
Query: 2 ITSPLPVD 9
+T+PLP++
Sbjct: 129 LTTPLPIN 136
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 RITSPLPVDL 10
RIT +P+D+
Sbjct: 432 RITGLIPIDM 441
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 RITSPLPVDL 10
RIT +P+D+
Sbjct: 432 RITGLIPIDM 441
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 RITSPLPVDL 10
RIT +P+D+
Sbjct: 432 RITGLIPIDM 441
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 RITSPLPV 8
RIT P+P+
Sbjct: 1899 RITYPVPI 1906
Query: 1 RITSPLPVD 9
++ PLP+D
Sbjct: 2331 KLGKPLPLD 2339
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 3 TSPLPV 8
TSP+P+
Sbjct: 548 TSPMPI 553
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 RITSPLPV 8
RIT P PV
Sbjct: 2001 RITYPAPV 2008
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 RITSPLPV 8
RIT P PV
Sbjct: 2001 RITYPAPV 2008
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 RITSPLPVD 9
++ PLPVD
Sbjct: 2390 KLGKPLPVD 2398
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 ITSPLPVD 9
ITSP+P D
Sbjct: 2374 ITSPVPPD 2381
>sp|ORF23_TTVV4|PROBABLE protein VP2|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 2 ITSPLPVD 9
+TSP+PV+
Sbjct: 137 LTSPVPVE 144
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 TSPLPVDL 10
+SP+P+D+
Sbjct: 587 SSPVPLDV 594
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 TSPLPVDL 10
+SP+P+D+
Sbjct: 587 SSPVPLDV 594
35|SequenceR|180|171|VPSAPRITSP
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 VPSAPRI 7
VPS PR+
Sbjct: 2450 VPSTPRL 2456
Query: 1 VPSAPRI 7
VP APR+
Sbjct: 903 VPEAPRL 909
>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19
Query: 3 SAPRITSP 10
+AP++T P
Sbjct: 19 TAPQVTEP 26
>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 PSAPRITSP 10
PSAPR P
Sbjct: 197 PSAPRAHFP 205
>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P
Query: 2 PSAPRITSP 10
P PR TSP
Sbjct: 163 PYRPRPTSP 171
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 VPSAPR 6
VP APR
Sbjct: 903 VPEAPR 908
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 PSAPRITSP 10
PSAPR P
Sbjct: 197 PSAPRAHFP 205
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 VPSAPR 6
VP APR
Sbjct: 903 VPEAPR 908
>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 PSAPRITSP 10
PSAPR P
Sbjct: 197 PSAPRAHFP 205
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 VPSAPR 6
VP APR
Sbjct: 905 VPEAPR 910
>sp|NEF_HV2CA|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 VPSAPRI 7
VP+ PR+
Sbjct: 100 VPATPRV 106
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain
Query: 5 PRITSP 10
PR+TSP
Sbjct: 61 PRVTSP 66
>sp|UL91_HCMVA|PROTEIN UL91|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VPSAPRITS 9
VPSAP+ S
Sbjct: 89 VPSAPKTVS 97
>sp|UL91_HCMVM|PROTEIN UL91|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VPSAPRITS 9
VPSAP+ S
Sbjct: 89 VPSAPKTVS 97
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 3 SAPRITSP 10
S P IT P
Sbjct: 61 STPEITGP 68
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 5 PRITSP 10
PR+TSP
Sbjct: 230 PRVTSP 235
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 4 APRITSP 10
+P+IT+P
Sbjct: 41 SPKITAP 47
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 5 PRITSP 10
PR+TSP
Sbjct: 230 PRVTSP 235
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 5 PRITSP 10
PR+TSP
Sbjct: 230 PRVTSP 235
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 4 APRITSP 10
+P+IT+P
Sbjct: 41 SPKITAP 47
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 4 APRITSP 10
+P+IT+P
Sbjct: 41 SPKITAP 47
>sp|VIE3_HCMVT|30 kDa immediate-early protein 2|Human cytomegalovirus (strain
Query: 5 PRITSP 10
PR+TSP
Sbjct: 61 PRVTSP 66
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PSAPRITSP 10
P PR +SP
Sbjct: 109 PCRPRSSSP 117
36|SequenceR|185|176|KPSGAVPSAP
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 PSGAVPSAP 10
P GA+PSAP
Sbjct: 466 PQGAIPSAP 474
Query: 2 PSGAVPSAP 10
P G VPSAP
Sbjct: 448 PQGIVPSAP 456
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 PSGAVPSAP 10
P+GA PS P
Sbjct: 300 PTGATPSLP 308
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 PSGAVPSAP 10
P GA PSAP
Sbjct: 468 PRGATPSAP 476
Query: 2 PSGAVPSAP 10
P G PSAP
Sbjct: 450 PQGVTPSAP 458
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 PSGAVPSAP 10
P GA PSAP
Sbjct: 468 PRGATPSAP 476
Query: 2 PSGAVPSAP 10
P G PSAP
Sbjct: 450 PQGVTPSAP 458
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 PSGAVP 7
PSGA+P
Sbjct: 2278 PSGAIP 2283
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 SGAVPS 8
SGAVPS
Sbjct: 1640 SGAVPS 1645
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 SGAVPS 8
SGAVPS
Sbjct: 1640 SGAVPS 1645
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 3 SGAVPSA 9
SGAVPS+
Sbjct: 1350 SGAVPSS 1356
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 1 KPSGAVPSA 9
+P G +P++
Sbjct: 723 RPDGTIPAS 731
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 KPSGAVPSA 9
+P G +P++
Sbjct: 723 RPDGTIPAS 731
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 KPSGAVPSAP 10
KP G SAP
Sbjct: 885 KPKGMYKSAP 894
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 PSGAVPSAP 10
P G PS P
Sbjct: 265 PPGVAPSIP 273
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 PSGAVPSAP 10
P G PS P
Sbjct: 265 PPGVAPSIP 273
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 PSGAVPSAP 10
P G PS P
Sbjct: 265 PPGVAPSIP 273
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 PSGAVPSA 9
PS A PSA
Sbjct: 586 PSEATPSA 593
>sp|NS1_I56A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 1 KPSGAVPSAP 10
+P G + S P
Sbjct: 76 EPKGTITSVP 85
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 PSGAVPSAP 10
P G +P+AP
Sbjct: 451 PQGLIPTAP 459
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 PSGAVPS 8
P G+VPS
Sbjct: 720 PGGSVPS 726
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PSGAVPS 8
P G VPS
Sbjct: 148 PCGTVPS 154
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PSGAVPS 8
P G VPS
Sbjct: 142 PCGTVPS 148
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 KPSGAVPSA 9
+P G VP+A
Sbjct: 492 RPCGIVPAA 500
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 KPSGAVPSAP 10
KP G SAP
Sbjct: 814 KPVGRYRSAP 823
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 PSGAVPSAP 10
P G P+AP
Sbjct: 449 PQGLTPTAP 457
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 1 KPSGAVPSA 9
+ SGA PSA
Sbjct: 363 RQSGATPSA 371
37|SequenceR|190|181|GRVPQKPSGA
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 GRVPQKPSGA 10
GRVPQ SG+
Sbjct: 242 GRVPQPLSGS 251
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GRVPQKPSGA 10
GRVPQ SG+
Sbjct: 242 GRVPQPLSGS 251
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GRVPQKPSGA 10
GR+PQ SG+
Sbjct: 242 GRIPQPLSGS 251
>sp|LF2_EBVG|PROTEIN LF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GRVPQKPSGA 10
GRVP P+GA
Sbjct: 199 GRVPALPAGA 208
>sp|TR14_HCMVA|PROTEIN TRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RVPQKP 7
R+P+KP
Sbjct: 164 RIPKKP 169
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PQKPSG 9
P KPSG
Sbjct: 3 PAKPSG 8
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RVPQKPS 8
RVP++PS
Sbjct: 403 RVPEQPS 409
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RVPQKPS 8
RVP++PS
Sbjct: 403 RVPEQPS 409
>sp|NEF_HV2D2|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 RVPQKPSG 9
RVP++P G
Sbjct: 22 RVPERPYG 29
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 1 GRVPQKPSG 9
GR+P+K G
Sbjct: 68 GRIPKKSQG 76
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 RVPQKP 7
RVP+KP
Sbjct: 1209 RVPEKP 1214
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 RVPQKP 7
RVP+KP
Sbjct: 1209 RVPEKP 1214
>sp|IR10_HCMVM|PROTEIN IRL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RVPQKPS 8
R+P +PS
Sbjct: 140 RIPYRPS 146
>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RVPQKPSG 9
R+PQ P G
Sbjct: 58 RLPQYPRG 65
>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 RVPQKPSG 9
R+PQ P G
Sbjct: 58 RLPQYPRG 65
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 RVPQKP 7
RVP+KP
Sbjct: 1210 RVPEKP 1215
>sp|IR10_HCMVA|PROTEIN IRL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RVPQKPS 8
R+P +PS
Sbjct: 141 RIPYRPS 147
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GRVPQKPSG 9
GRV Q P G
Sbjct: 526 GRVHQTPFG 534
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GRVPQKPSG 9
GRV Q P G
Sbjct: 526 GRVHQTPFG 534
>sp|PG067_VARV|PROTEIN OPG067|Variola virus
Query: 1 GRVPQKPS 8
G+V Q PS
Sbjct: 126 GKVSQNPS 133
>sp|PG067_VAR67|PROTEIN OPG067|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 GRVPQKPS 8
G+V Q PS
Sbjct: 126 GKVSQNPS 133
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 4 PQKPSG 9
P KPSG
Sbjct: 3 PAKPSG 8
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PQKPSG 9
P KPSG
Sbjct: 3 PAKPSG 8
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 RVPQKPSG 9
+ P+ PSG
Sbjct: 2893 KAPEPPSG 2900
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 VPQKP 7
VPQKP
Sbjct: 56 VPQKP 60
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 VPQKP 7
VPQKP
Sbjct: 56 VPQKP 60
38|SequenceR|195|186|AGRYYGRVPQ
>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 GRYYGRVP 9
G Y GRVP
Sbjct: 336 GMYRGRVP 343
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AGRYYGRVP 9
AGR GRVP
Sbjct: 51 AGRSAGRVP 59
>sp|BILF1_EBVB9|G-PROTEIN coupled receptor BILF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GRYYGRVP 9
RY+ RVP
Sbjct: 301 ARYFRRVP 308
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 1 AGRYYGRVP 9
GRYY P
Sbjct: 644 GGRYYEHAP 652
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 1 AGRYYGRVP 9
GRYY P
Sbjct: 644 GGRYYEHAP 652
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 1 AGRYYGRVP 9
GRYY P
Sbjct: 644 GGRYYEHAP 652
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 1 AGRYYGRVP 9
GRYY P
Sbjct: 644 GGRYYEHAP 652
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 1 AGRYYGRVP 9
GRYY P
Sbjct: 644 GGRYYEHAP 652
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 1 AGRYYGRVP 9
GRYY P
Sbjct: 644 GGRYYEHAP 652
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 1 AGRYYGRVP 9
GRYY P
Sbjct: 644 GGRYYEHAP 652
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 1 AGRYYGRVP 9
GRYY P
Sbjct: 644 GGRYYEHAP 652
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 1 AGRYYGRVP 9
GRYY P
Sbjct: 644 GGRYYEHAP 652
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 1 AGRYYGRVP 9
GRYY P
Sbjct: 644 GGRYYEHAP 652
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 1 AGRYYGRVP 9
GRYY P
Sbjct: 644 GGRYYEHAP 652
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 GRYYGRVP 9
GR +G++P
Sbjct: 560 GRTFGKLP 567
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 GRYYGRVP 9
GR +G++P
Sbjct: 560 GRTFGKLP 567
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 GRYYGRVP 9
GR +G++P
Sbjct: 561 GRTFGKLP 568
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 GRYYGRVP 9
GR +G++P
Sbjct: 561 GRTFGKLP 568
>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 4 YYGRVP 9
Y GRVP
Sbjct: 21 YLGRVP 26
>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)
Query: 4 YYGRVP 9
Y GRVP
Sbjct: 21 YLGRVP 26
>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara)
Query: 4 YYGRVP 9
Y GRVP
Sbjct: 21 YLGRVP 26
>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)
Query: 4 YYGRVP 9
Y GRVP
Sbjct: 21 YLGRVP 26
>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 4 YYGRVP 9
Y GRVP
Sbjct: 21 YLGRVP 26
>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)
Query: 3 RYYGRV 8
RY+GRV
Sbjct: 230 RYFGRV 235
>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)
Query: 3 RYYGRV 8
RY+GRV
Sbjct: 230 RYFGRV 235
>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)
Query: 3 RYYGRV 8
RY+GRV
Sbjct: 230 RYFGRV 235
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 AGRYYGRVP 9
AG+ G+VP
Sbjct: 305 AGKVTGKVP 313
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 3 RYYGRV 8
RYYG V
Sbjct: 517 RYYGNV 522
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 RYYGRVPQ 10
+YY R P+
Sbjct: 884 KYYKRAPR 891
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 3 RYYGRVP 9
RYY +VP
Sbjct: 249 RYYEQVP 255
>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 4 YYGRVP 9
Y GR+P
Sbjct: 21 YLGRIP 26
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AGRYYGRVP 9
AGR GR P
Sbjct: 51 AGRSTGRAP 59
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 AGRYYGRV 8
AG Y GR+
Sbjct: 6491 AGHYDGRI 6498
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 2 GRYYGR 7
GR++GR
Sbjct: 238 GRFFGR 243
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GRYYGR 7
GR++GR
Sbjct: 238 GRFFGR 243
>sp|UL20_HHV11|PROTEIN UL20|Human herpesvirus 1 (strain 17)
Query: 1 AGRYYG 6
AG YYG
Sbjct: 82 AGMYYG 87
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 RYYGRV 8
+YYG++
Sbjct: 263 KYYGKI 268
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RYYGRVP 9
RY G+VP
Sbjct: 259 RYAGKVP 265
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 5 YGRVPQ 10
YG VPQ
Sbjct: 161 YGDVPQ 166
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 AGRYYGRV 8
AG++ GRV
Sbjct: 336 AGKFCGRV 343
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 AGRYYGRV 8
AG++ GRV
Sbjct: 336 AGKFCGRV 343
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 AGRYYGRV 8
AG++ GRV
Sbjct: 336 AGKFCGRV 343
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 YGRVPQ 10
YG VPQ
Sbjct: 163 YGDVPQ 168
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 YGRVPQ 10
YG VPQ
Sbjct: 163 YGDVPQ 168
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 2 GRYYGR 7
G YYG+
Sbjct: 418 GAYYGK 423
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 GRYYGR 7
G YYG+
Sbjct: 418 GAYYGK 423
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GRYYGR 7
G YYG+
Sbjct: 418 GAYYGK 423
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 GRYYGR 7
G YYG+
Sbjct: 418 GAYYGK 423
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 YGRVPQ 10
YG VPQ
Sbjct: 162 YGDVPQ 167
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 5 YGRVPQ 10
YG VPQ
Sbjct: 161 YGDVPQ 166
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 YGRVPQ 10
YG VPQ
Sbjct: 163 YGDVPQ 168
39|SequenceR|200|191|FTGGVAGRYY
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 2 TGGVAGRYY 10
T GVA +Y+
Sbjct: 650 TAGVAAKYF 658
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 TGGVAGR 8
TGG AGR
Sbjct: 388 TGGTAGR 394
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 FTGGVAGRYY 10
+T GV +YY
Sbjct: 784 YTAGVCIKYY 793
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 TGGVAGR 8
TGG AGR
Sbjct: 388 TGGNAGR 394
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 3 GGVAGRY 9
GGV GR+
Sbjct: 219 GGVPGRH 225
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 3 GGVAGRY 9
GGV GR+
Sbjct: 219 GGVPGRH 225
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 FTGGVAGRYY 10
+T GV +YY
Sbjct: 784 YTAGVCIKYY 793
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 FTGGVAGRYY 10
F+G + G YY
Sbjct: 2473 FSGLMRGNYY 2482
>sp|NEF_HV2D2|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 GGVAGRYY 10
GG+ G YY
Sbjct: 110 GGLEGMYY 117
>sp|NEF_HV2SB|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 GGVAGRYY 10
GG+ G YY
Sbjct: 127 GGLEGMYY 134
40|SequenceR|205|196|NHLRDFTGGV
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 2 HLRDFTGGV 10
H RD TGGV
Sbjct: 342 HNRDMTGGV 350
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 2 HLRDFTGGV 10
H RD TGGV
Sbjct: 342 HNRDMTGGV 350
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 1 NHLRDFTG 8
NHLRD G
Sbjct: 353 NHLRDIMG 360
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 NHLRDFTG 8
NHLRD G
Sbjct: 359 NHLRDLMG 366
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 NHLRDFTG 8
NHLRD G
Sbjct: 359 NHLRDLMG 366
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 1 NHLRDFTG 8
NHLRD G
Sbjct: 352 NHLRDIMG 359
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 1 NHLRDFTGGV 10
+H R+ GGV
Sbjct: 312 HHFREMRGGV 321
>sp|ARBH_HHV8P|APOPTOSIS regulator Bcl-2 homolog|Human herpesvirus 8 type P
Query: 2 HLRDFTGGV 10
HLRDF V
Sbjct: 106 HLRDFALAV 114
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HLRDF 6
HLRDF
Sbjct: 746 HLRDF 750
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HLRDF 6
HLRDF
Sbjct: 760 HLRDF 764
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 HLRDFTGG 9
HLRD G
Sbjct: 82 HLRDLEGA 89
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 HLRDFTGG 9
HLRD G
Sbjct: 82 HLRDLEGA 89
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 NHLRDF 6
NH+ DF
Sbjct: 89 NHINDF 94
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 NHLRDF 6
NH+ DF
Sbjct: 2731 NHVEDF 2736
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 NHLRDF 6
NH+ DF
Sbjct: 2643 NHVEDF 2648
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 5 DFTGGV 10
DFTG V
Sbjct: 3115 DFTGSV 3120
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 2 HLRDFTGG 9
H R F GG
Sbjct: 169 HSRGFPGG 176
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 DFTGGV 10
DFTG V
Sbjct: 3115 DFTGSV 3120
41|SequenceR|210|201|LVKHANHLRD
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 1 LVKHANHLRD 10
L KH++H RD
Sbjct: 306 LRKHSDHYRD 315
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 KHANHLRD 10
KH NH +D
Sbjct: 5 KHTNHRKD 12
>sp|VE8E2_HPV18|PROTEIN E8^E2C|Human papillomavirus type 18
Query: 1 LVKHANHLRD 10
L KH++H RD
Sbjct: 112 LRKHSDHYRD 121
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 HANHLRD 10
HA+HL D
Sbjct: 497 HADHLND 503
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 LVKHANH 7
L++HA+H
Sbjct: 571 LIRHADH 577
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 LVKHANHLRD 10
L+K A LRD
Sbjct: 1175 LIKRATRLRD 1184
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 LVKHANHLRD 10
L+K A LRD
Sbjct: 1175 LIKRATRLRD 1184
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 HANHLRD 10
+ NHLRD
Sbjct: 1299 NGNHLRD 1305
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 LVKHANHLRD 10
L+K A LRD
Sbjct: 1175 LIKRATRLRD 1184
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 LVKHANHLRD 10
L+K A LRD
Sbjct: 1175 LIKRATRLRD 1184
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 LVKHANHLRD 10
L+K A LRD
Sbjct: 1175 LIKRATRLRD 1184
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 HANHLRD 10
+ NHLRD
Sbjct: 1299 NGNHLRD 1305
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 6 NHLRD 10
NHLRD
Sbjct: 359 NHLRD 363
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 6 NHLRD 10
NHLRD
Sbjct: 359 NHLRD 363
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 6 NHLRD 10
NHLRD
Sbjct: 352 NHLRD 356
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 6 NHLRD 10
NHLRD
Sbjct: 353 NHLRD 357
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 2 VKHANH-LRD 10
VKH +H LRD
Sbjct: 379 VKHDDHLLRD 388
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 VKHANH-LRD 10
VKH +H LRD
Sbjct: 379 VKHDDHLLRD 388
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 VKHANH-LRD 10
VKH +H LRD
Sbjct: 379 VKHDDHLLRD 388
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 VKHANH-LRD 10
VKH +H LRD
Sbjct: 379 VKHDDHLLRD 388
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 VKHANH-LRD 10
VKH +H LRD
Sbjct: 379 VKHDDHLLRD 388
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 VKHANH-LRD 10
VKH +H LRD
Sbjct: 379 VKHDDHLLRD 388
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 VKHANHL 8
VKH +HL
Sbjct: 379 VKHDDHL 385
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 VKHANHL 8
VKH +HL
Sbjct: 379 VKHDDHL 385
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 VKHANHL 8
VKH +HL
Sbjct: 379 VKHDDHL 385
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 2 VKHANHL 8
VKH +HL
Sbjct: 379 VKHDDHL 385
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 VKHANHL 8
VKH +HL
Sbjct: 379 VKHDDHL 385
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 2 VKHANHL 8
VKH +HL
Sbjct: 379 VKHDDHL 385
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 VKHANHL 8
VKH +HL
Sbjct: 379 VKHDDHL 385
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 KHANHL 8
K+ANHL
Sbjct: 3261 KYANHL 3266
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 VKHANHL 8
VKH +HL
Sbjct: 379 VKHDDHL 385
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 LVKHANHLRD 10
L+K +HLR+
Sbjct: 504 LIKGRSHLRN 513
>sp|PG068_VARV|PROTEIN OPG068|Variola virus
Query: 1 LVKHANHLR 9
LVK NHL+
Sbjct: 482 LVKMINHLK 490
>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LVKHANHLR 9
LVK NHL+
Sbjct: 482 LVKMINHLK 490
>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)
Query: 1 LVKHANHLR 9
LVK NHL+
Sbjct: 482 LVKMINHLK 490
>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LVKHANHLR 9
LVK NHL+
Sbjct: 482 LVKMINHLK 490
>sp|ORF24_TTVV2|ORF2/4 protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 2 VKHANHL 8
V H NHL
Sbjct: 34 VAHFNHL 40
>sp|ORF24_TTVV1|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (strain VT416)
Query: 2 VKHANHL 8
V H NHL
Sbjct: 34 VAHFNHL 40
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 6 NHLRD 10
NH+RD
Sbjct: 414 NHIRD 418
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 LVKHANHLR 9
L H NHL+
Sbjct: 640 LHTHLNHLK 648
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 4 HANHLR 9
H NHL+
Sbjct: 636 HLNHLK 641
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 VKHANHL 8
V HAN+L
Sbjct: 7019 VMHANYL 7025
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 VKHANHL 8
V HAN+L
Sbjct: 7056 VMHANYL 7062
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 VKHANHL 8
V HAN+L
Sbjct: 7076 VMHANYL 7082
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 VKHANHL 8
V HAN+L
Sbjct: 7106 VMHANYL 7112
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 LVKHANHLRD 10
+VK +HLR+
Sbjct: 504 IVKGRSHLRN 513
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 LVKHANHLRD 10
+VK +HLR+
Sbjct: 504 IVKGRSHLRN 513
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 1 LVKHANHLRD 10
+VK +HLR+
Sbjct: 504 IVKGRSHLRN 513
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 4 HANHLR 9
H NHL+
Sbjct: 643 HLNHLK 648
42|SequenceR|215|206|CAVSLLVKHA
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CAVSLLVKH 9
C LLVKH
Sbjct: 28 CVFPLLVKH 36
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 CAVSLLVKH 9
C LLVKH
Sbjct: 28 CVFPLLVKH 36
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CAVSLLVKH 9
C LLVKH
Sbjct: 28 CVFPLLVKH 36
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 CAVSLLVKH 9
C +S L++H
Sbjct: 2271 CVLSALIQH 2279
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 CAVSLLVKHA 10
C V+LLV +A
Sbjct: 235 CDVTLLVIYA 244
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 3 VSLLVKHA 10
+SLLV HA
Sbjct: 215 LSLLVPHA 222
>sp|VEMP_MERS1|ENVELOPE small membrane protein|Middle East respiratory syndrome-related
Query: 1 CAVSLLV 7
CA++LLV
Sbjct: 23 CAITLLV 29
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CAVSLLVKH 9
C + L V+H
Sbjct: 2118 CKIVLFVRH 2126
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CAVSLLVKH 9
C + L V+H
Sbjct: 2118 CKIVLFVRH 2126
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 VSLLVKH 9
V LLVKH
Sbjct: 3609 VMLLVKH 3615
43|SequenceR|220|211|EQALICAVSL
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 4 LICAVSL 10
L+CA+S+
Sbjct: 11 LVCAISM 17
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 3 ALICAVS 9
ALICAV+
Sbjct: 10 ALICAVT 16
>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)
Query: 4 LICAVSL 10
LIC+VSL
Sbjct: 185 LICSVSL 191
>sp|GP_PUUMU|ENVELOPE glycoprotein|Puumala virus (strain Udmurtia/894CG/91)
Query: 4 LICAVSL 10
L+C VSL
Sbjct: 88 LVCTVSL 94
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 4 LICAVSL 10
L+C+VSL
Sbjct: 995 LVCSVSL 1001
44|SequenceR|225|216|GVVLQEQALI
>sp|EBNA2_EBVA8|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GVVLQEQAL 9
GV+ +QAL
Sbjct: 272 GVIYDQQAL 280
45|SequenceR|230|221|DKDAVGVVLQ
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 2 KDAVGVVLQ 10
K+A+G+VLQ
Sbjct: 70 KEAIGMVLQ 78
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 2 KDAVGVVLQ 10
K+A+G+VLQ
Sbjct: 70 KEAIGMVLQ 78
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 2 KDAVGVVL 9
KDA+G+VL
Sbjct: 70 KDAIGMVL 77
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 2 KDAVGVVL 9
KDA+G+VL
Sbjct: 70 KDAIGMVL 77
>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12
Query: 2 KDAVGVVLQ 10
K+A+G++LQ
Sbjct: 70 KEAIGIMLQ 78
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 2 KDAVGVVLQ 10
K A+G+VLQ
Sbjct: 70 KQAIGMVLQ 78
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 DKDAVGVVL 9
D+D +GVVL
Sbjct: 1305 DQDRLGVVL 1313
>sp|VE2_HPV37|REGULATORY protein E2|Human papillomavirus 37
Query: 2 KDAVGVVL 9
KDA+G+V+
Sbjct: 70 KDAIGMVI 77
>sp|VE2_HPV5B|REGULATORY protein E2|Human papillomavirus type 5b
Query: 2 KDAVGVVLQ 10
K+A+ +VLQ
Sbjct: 70 KEAIAMVLQ 78
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 2 KDAVGVVLQ 10
K+A+ +VLQ
Sbjct: 70 KEAIAMVLQ 78
>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5
Query: 2 KDAVGVVLQ 10
K+A+ +VLQ
Sbjct: 70 KEAIAMVLQ 78
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 1 DKDAVGVVLQ 10
D DA GVV +
Sbjct: 292 DTDASGVVTE 301
46|SequenceR|235|226|KSKLLDKDAV
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 1 KSKLLDKDAV 10
+ +LD+DAV
Sbjct: 72 RGDMLDRDAV 81
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 1 KSKLLDKDAV 10
+ +LD+DAV
Sbjct: 72 RGDMLDRDAV 81
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 1 KSKLLDKDAV 10
+ LLD+DA+
Sbjct: 72 RGGLLDRDAI 81
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 4 LLDKDAV 10
LLD+DA+
Sbjct: 74 LLDRDAI 80
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 3 KLLDKDAV 10
++ DKDAV
Sbjct: 72 QMFDKDAV 79
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton
Query: 3 KLLDKDAV 10
++ DKDAV
Sbjct: 72 QMFDKDAV 79
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 5 LDKDAV 10
LDKDA+
Sbjct: 2780 LDKDAI 2785
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 KSKLLDK 7
KSKL+DK
Sbjct: 530 KSKLVDK 536
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 1 KSKLLDKDA 9
K+K+ +KDA
Sbjct: 171 KAKVCEKDA 179
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 1 KSKLLDK 7
KSKL+DK
Sbjct: 533 KSKLVDK 539
47|SequenceR|240|231|LEPLLKSKLL
***** No hits found ******
48|SequenceR|245|236|TYPQLLEPLL
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 TYPQLLEPL 9
+ PQ+LEP
Sbjct: 754 SMPQILEPF 762
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 TYPQLLE 7
TYP LLE
Sbjct: 501 TYPSLLE 507
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 TYPQLLE 7
TYP LLE
Sbjct: 501 TYPSLLE 507
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 TYPQLLE 7
TYP LLE
Sbjct: 501 TYPSLLE 507
>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19
Query: 1 TYPQLLEPLL 10
T PQ+ EP L
Sbjct: 19 TAPQVTEPPL 28
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 2 YPQLLEPL 9
YP +L P+
Sbjct: 241 YPSILHPI 248
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 YPQLLEPL 9
YP +L P+
Sbjct: 241 YPSILHPI 248
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 2 YPQLLEPL 9
YP +L P+
Sbjct: 241 YPSILHPI 248
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 TYPQLLEP 8
TYP +EP
Sbjct: 318 TYPPTIEP 325
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 YPQLLEPL 9
YP +L P+
Sbjct: 240 YPSILHPI 247
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 YPQLLEPL 9
YP +L P+
Sbjct: 240 YPSILHPI 247
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 YPQLLEPL 9
YP +L P+
Sbjct: 240 YPSILHPI 247
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 YPQLLEPL 9
YP +L P+
Sbjct: 248 YPSILHPI 255
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 YPQLLEPL 9
YP +L P+
Sbjct: 249 YPSILHPI 256
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 YPQLLEPL 9
YP +L P+
Sbjct: 249 YPSILHPI 256
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 YPQLLEPL 9
YP +L P+
Sbjct: 249 YPSILHPI 256
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 2 YPQLLEPL 9
YP +L P+
Sbjct: 249 YPSILHPI 256
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 YPQLLEPL 9
YP +L P+
Sbjct: 249 YPSILHPI 256
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 TYPQLLEPL 9
YP +L P+
Sbjct: 254 NYPSILHPI 262
49|SequenceR|250|241|HEVRETYPQL
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 HEVRETYPQL 10
H +++ YPQL
Sbjct: 1736 HSIKKNYPQL 1745
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 HEVRETYPQL 10
H +R YP+L
Sbjct: 1737 HSIRRNYPKL 1746
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 HEVRETYPQL 10
++VRETY ++
Sbjct: 653 NDVRETYARM 662
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 1 HEVRETYPQL 10
++VRETY ++
Sbjct: 653 NDVRETYARM 662
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 HEVRETYPQL 10
++VRETY ++
Sbjct: 653 NDVRETYARM 662
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 HEVRETYPQL 10
++VRETY ++
Sbjct: 653 NDVRETYARM 662
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 HEVRETYPQL 10
++VRETY ++
Sbjct: 653 NDVRETYARM 662
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 HEVRETYPQL 10
++VRETY ++
Sbjct: 653 NDVRETYARM 662
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 HEVRETYPQL 10
H ++ YP L
Sbjct: 1740 HSIKRNYPYL 1749
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EVRETYPQL 10
+V ET+P+L
Sbjct: 554 KVPETFPEL 562
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EVRETYPQL 10
+V ET+P+L
Sbjct: 554 KVPETFPEL 562
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EVRETYPQL 10
+V ET+P+L
Sbjct: 554 KVPETFPEL 562
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EVRETYPQL 10
+V ET+P+L
Sbjct: 554 KVPETFPEL 562
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EVRETYPQL 10
+V ET+P+L
Sbjct: 555 KVPETFPEL 563
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EVRETYPQL 10
+V ET+P+L
Sbjct: 548 KVPETFPEL 556
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EVRETYPQL 10
+V ET+P+L
Sbjct: 554 KVPETFPEL 562
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EVRETYPQL 10
+V ET+P+L
Sbjct: 554 KVPETFPEL 562
>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HEVRETYPQL 10
H + +TYP++
Sbjct: 376 HTLLKTYPEI 385
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EVRETYPQL 10
+V ET+P+L
Sbjct: 554 KVPETFPEL 562
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EVRETYPQL 10
+V ET+P+L
Sbjct: 554 KVPETFPEL 562
>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HEVRETYPQL 10
H + +TYP++
Sbjct: 376 HTLLKTYPEI 385
>sp|VPK2_VACCT|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Tian Tan)
Query: 1 HEVRETYPQL 10
H + +TYP++
Sbjct: 376 HTLLKTYPEI 385
>sp|VPK2_VACCP|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 HEVRETYPQL 10
H + +TYP++
Sbjct: 342 HTLLKTYPEI 351
>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 HEVRETYPQL 10
H + +TYP++
Sbjct: 376 HTLLKTYPEI 385
>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)
Query: 1 HEVRETYPQL 10
H + +TYP++
Sbjct: 376 HTLLKTYPEI 385
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 2 EVRETYPQL 10
+V E YP+L
Sbjct: 79 QVAELYPEL 87
>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 112 LRDTHPQ 118
>sp|HBSAG_HBVF4|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 112 LRDTHPQ 118
>sp|HBSAG_HBVF3|LARGE envelope protein|Hepatitis B virus genotype F1
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 112 LRDTHPQ 118
>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 112 LRDTHPQ 118
>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 111 LRDTHPQ 117
>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 112 LRDTHPQ 118
>sp|HBSAG_HBVB6|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 112 LRDTHPQ 118
>sp|HBSAG_HBVB5|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 112 LRDTHPQ 118
>sp|HBSAG_HBVB4|LARGE envelope protein|Hepatitis B virus genotype B/C
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 101 LRDTHPQ 107
>sp|HBSAG_HBVB3|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 112 LRDTHPQ 118
>sp|VEGFH_ORFN2|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ2) (OV
Query: 3 VRETYPQL 10
V ET+P+L
Sbjct: 45 VSETHPEL 52
>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 111 LRDTHPQ 117
>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 111 LRDTHPQ 117
>sp|HBSAG_HBVB7|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 112 LRDTHPQ 118
>sp|HBSAG_HBVH2|LARGE envelope protein|Hepatitis B virus genotype H
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 112 LRDTHPQ 118
>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 101 LRDTHPQ 107
>sp|HBSAG_HBVH3|LARGE envelope protein|Hepatitis B virus genotype H
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 112 LRDTHPQ 118
>sp|HBSAG_HBVB2|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 101 LRDTHPQ 107
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 HEVRETYPQL 10
HE+R+ P L
Sbjct: 954 HEIRDFDPDL 963
>sp|HBSAG_HBVH1|LARGE envelope protein|Hepatitis B virus genotype H
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 112 LRDTHPQ 118
>sp|HBSAG_HBVB1|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 101 LRDTHPQ 107
>sp|HBSAG_HBVB8|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 3 VRETYPQ 9
+R+T+PQ
Sbjct: 112 LRDTHPQ 118
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EVRETYPQL 10
++RE Y QL
Sbjct: 943 KLREVYTQL 951
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EVRETYPQL 10
++RE Y QL
Sbjct: 943 KLREVYTQL 951
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EVRETYPQL 10
++RE Y QL
Sbjct: 943 KLREVYTQL 951
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EVRETYPQL 10
++RE Y QL
Sbjct: 943 KLREVYTQL 951
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EVRETYPQL 10
+V ET+P+L
Sbjct: 58 KVPETFPEL 66
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EVRETYPQL 10
+V ET+P+L
Sbjct: 554 KVPETFPEL 562
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EVRETYPQL 10
+V ET+P+L
Sbjct: 533 KVPETFPEL 541
50|SequenceR|255|246|LFESLHEVRE
>sp|VE6_HPV52|PROTEIN E6|Human papillomavirus 52
Query: 1 LFESLHEVR 9
L ES+HE+R
Sbjct: 19 LEESVHEIR 27
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 4 SLHEVRE 10
SLHEV++
Sbjct: 963 SLHEVKD 969
51|SequenceR|260|251|PKIDVLFESL
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 PKIDVLFESL 10
P++ +FESL
Sbjct: 112 PRLRSIFESL 121
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PKIDVLF 7
PK D++F
Sbjct: 1207 PKYDIIF 1213
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PKIDVLF 7
PK D++F
Sbjct: 1207 PKYDIIF 1213
52|SequenceR|265|256|DFTLSPKIDV
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 FTLSPK 7
FTLSP+
Sbjct: 291 FTLSPR 296
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 TLSPKIDV 10
T+SP +DV
Sbjct: 449 TMSPFVDV 456
>sp|UL148_HCMVM|MEMBRANE protein UL148|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 FTLSPK 7
+TLSPK
Sbjct: 264 YTLSPK 269
>sp|VP7_ROTHV|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 DFTLSPKI 8
DF++ PK+
Sbjct: 126 DFSIDPKL 133
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 FTLSPKI 8
FTL P+I
Sbjct: 220 FTLDPEI 226
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 FTLSPKI 8
FTL P+I
Sbjct: 235 FTLDPEI 241
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 2 FTLSPKID 9
+TL PKI+
Sbjct: 276 WTLDPKIE 283
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 FTLSPKID 9
+TL PKI+
Sbjct: 276 WTLDPKIE 283
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 2 FTLSPKID 9
+TL PKI+
Sbjct: 276 WTLDPKIE 283
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 FTLSPKID 9
+TL PKI+
Sbjct: 276 WTLDPKIE 283
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 2 FTLSPKID 9
+TL PKI+
Sbjct: 276 WTLDPKIE 283
53|SequenceR|270|261|LLPIVDFTLS
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 LLPIVDFTLS 10
LL I+D TLS
Sbjct: 338 LLAIIDETLS 347
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 1 LLPIVDFTLS 10
LL I+D TLS
Sbjct: 338 LLAIIDETLS 347
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LPIVDF 7
+PIVDF
Sbjct: 93 IPIVDF 98
>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)
Query: 2 LPIVDF 7
+PIVDF
Sbjct: 93 IPIVDF 98
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 PIVDFT 8
PI+DF+
Sbjct: 1517 PIIDFS 1522
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 LPIVDFTLS 10
+PI+DF S
Sbjct: 81 VPILDFRCS 89
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain
Query: 2 LPIVDFTLS 10
+PI+DF S
Sbjct: 81 VPILDFRCS 89
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 LLPIVDFTLS 10
L + DFTLS
Sbjct: 1873 LAELTDFTLS 1882
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 LPIVDFTL 9
LPI FTL
Sbjct: 1640 LPIKQFTL 1647
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 LPIVDFTL 9
LPI FTL
Sbjct: 1640 LPIKQFTL 1647
54|SequenceR|275|266|PGYPDLLPIV
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PGYPDLLP 8
PG P LLP
Sbjct: 48 PGSPQLLP 55
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PGYPDLLP 8
PG P LLP
Sbjct: 48 PGSPQLLP 55
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 3 YPDLLPIV 10
YPDL P++
Sbjct: 238 YPDLKPVI 245
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 1 PGYPDLLPIV 10
P +PDLLP V
Sbjct: 95 PAHPDLLPRV 104
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GYPDLLPI 9
GYP LLP+
Sbjct: 650 GYPALLPL 657
>sp|GP42_EBVA8|GLYCOPROTEIN 42|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 PDLLPIV 10
PD+LP+V
Sbjct: 146 PDILPVV 152
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GYPDLLPI 9
GYP LLP+
Sbjct: 650 GYPALLPL 657
>sp|GP42_EBVG|GLYCOPROTEIN 42|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 PDLLPIV 10
PD+LP+V
Sbjct: 146 PDILPVV 152
>sp|GP42_EBVB9|GLYCOPROTEIN 42|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PDLLPIV 10
PD+LP+V
Sbjct: 146 PDILPVV 152
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 2 GYPDLLPIV 10
GYPD +P++
Sbjct: 415 GYPDGIPVL 423
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 2 GYPDLLPIV 10
GYPD +P++
Sbjct: 415 GYPDGIPVL 423
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 2 GYPDLLPIV 10
GYPD +P++
Sbjct: 414 GYPDGIPVL 422
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 639 GYPALMPL 646
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 652 GYPALMPL 659
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 PGYPDLLPI 9
P YP LPI
Sbjct: 2285 PKYPPALPI 2293
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 639 GYPALMPL 646
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 PGYPDLLPI 9
P YP LPI
Sbjct: 2287 PKYPPALPI 2295
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 652 GYPALMPL 659
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 PGYPDLLPI 9
P YP LPI
Sbjct: 2285 PKYPPALPI 2293
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 645 GYPALMPL 652
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 1 PGYPDLLPIV 10
P PD P+V
Sbjct: 289 PSDPDCAPVV 298
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 PGYPDLLPI 9
P YP LPI
Sbjct: 2284 PKYPPALPI 2292
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 645 GYPALMPL 652
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 652 GYPALMPL 659
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 652 GYPALMPL 659
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 652 GYPALMPL 659
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 652 GYPALMPL 659
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 645 GYPALMPL 652
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 3 YPDLLP 8
YPD LP
Sbjct: 409 YPDKLP 414
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 YPDLLP 8
YPD LP
Sbjct: 409 YPDKLP 414
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 3 YPDLLP 8
YPD LP
Sbjct: 409 YPDKLP 414
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 639 GYPALMPL 646
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 639 GYPALMPL 646
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 YPDLLP 8
YPD LP
Sbjct: 409 YPDKLP 414
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 649 GYPALMPL 656
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 639 GYPALMPL 646
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 649 GYPALMPL 656
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 649 GYPALMPL 656
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 649 GYPALMPL 656
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 GYPDLLPI 9
G PDLL I
Sbjct: 651 GLPDLLTI 658
>sp|GLRX1_VARV|GLUTAREDOXIN-1 virus
Query: 2 GYPDLLPI 9
GY DLL I
Sbjct: 82 GYSDLLEI 89
>sp|GLRX1_VAR67|GLUTAREDOXIN-1 virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 GYPDLLPI 9
GY DLL I
Sbjct: 82 GYSDLLEI 89
>sp|GLRX1_VACCT|GLUTAREDOXIN-1 virus (strain Tian Tan)
Query: 2 GYPDLLPI 9
GY DLL I
Sbjct: 82 GYSDLLEI 89
>sp|GLRX1_VACCP|GLUTAREDOXIN-1 virus (strain L-IVP) (VACV)
Query: 2 GYPDLLPI 9
GY DLL I
Sbjct: 82 GYSDLLEI 89
>sp|GLRX1_VACCC|GLUTAREDOXIN-1 virus (strain Copenhagen) (VACV)
Query: 2 GYPDLLPI 9
GY DLL I
Sbjct: 82 GYSDLLEI 89
>sp|GLRX1_VACCA|GLUTAREDOXIN-1 virus (strain Ankara) (VACV)
Query: 2 GYPDLLPI 9
GY DLL I
Sbjct: 82 GYSDLLEI 89
>sp|GLRX1_MONPV|GLUTAREDOXIN-1 virus (MPXV)
Query: 2 GYPDLLPI 9
GY DLL I
Sbjct: 82 GYSDLLEI 89
>sp|GLRX1_CWPXG|GLUTAREDOXIN-1 virus (strain GRI-90 /
Query: 2 GYPDLLPI 9
GY DLL I
Sbjct: 82 GYSDLLEI 89
>sp|GLRX1_CWPXB|GLUTAREDOXIN-1 virus (strain Brighton Red)
Query: 2 GYPDLLPI 9
GY DLL I
Sbjct: 82 GYSDLLEI 89
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 639 GYPALMPL 646
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 639 GYPALMPL 646
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 649 GYPALMPL 656
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 649 GYPALMPL 656
>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus
Query: 1 PGYPDLLPI 9
PGY LP+
Sbjct: 73 PGYYIFLPV 81
>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate
Query: 1 PGYPDLLPI 9
PGY LP+
Sbjct: 73 PGYYIFLPV 81
>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 1 PGYPDLLPI 9
PGY LP+
Sbjct: 73 PGYYIFLPV 81
>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)
Query: 1 PGYPDLLPI 9
PGY LP+
Sbjct: 73 PGYYIFLPV 81
>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 1 PGYPDLLPI 9
PGY LP+
Sbjct: 73 PGYYIFLPV 81
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 PGYPDLL 7
PGY DLL
Sbjct: 313 PGYYDLL 319
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 PGYPDLL 7
PGY DLL
Sbjct: 313 PGYYDLL 319
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 GYPDLLPI 9
GYP L+P+
Sbjct: 650 GYPALMPL 657
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 PGYPDLL 7
PGY DLL
Sbjct: 312 PGYYDLL 318
>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10
Query: 1 PGYPDLLPIV 10
P PD P++
Sbjct: 290 PSDPDCAPVI 299
>sp|VE8E2_HPV28|PROTEIN E8^E2C|Human papillomavirus 28
Query: 1 PGYPDLLPIV 10
P PD P+V
Sbjct: 89 PSDPDCAPVV 98
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 4 PDLLPIV 10
PDL PI+
Sbjct: 392 PDLKPII 398
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 3 YPDLLPIV 10
Y DL+P V
Sbjct: 231 YKDLIPAV 238
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 4 PDLLPIV 10
PDL PI+
Sbjct: 392 PDLKPII 398
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 PGYPDLL 7
PGY DLL
Sbjct: 312 PGYYDLL 318
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 4 PDLLPIV 10
PDL PI+
Sbjct: 392 PDLKPII 398
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 4 PDLLPIV 10
PDL PI+
Sbjct: 392 PDLKPII 398
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 4 PDLLPIV 10
PDL PI+
Sbjct: 392 PDLKPII 398
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 4 PDLLPIV 10
PDL PI+
Sbjct: 392 PDLKPII 398
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 1 PGYPDLLPIV 10
P PD P++
Sbjct: 302 PSDPDCAPVI 311
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 3 YPDLLP 8
Y DLLP
Sbjct: 442 YSDLLP 447
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 PGYPDLL 7
P Y DLL
Sbjct: 3315 PNYEDLL 3321
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 PGYPDLL 7
P Y DLL
Sbjct: 3292 PNYEDLL 3298
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PGYPDLL 7
P Y DLL
Sbjct: 3315 PNYEDLL 3321
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PGYPDLL 7
P Y DLL
Sbjct: 3292 PNYEDLL 3298
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 4 PDLLPIV 10
PDL PI+
Sbjct: 392 PDLKPII 398
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PGYPDLLPIV 10
P YP+L +V
Sbjct: 604 PNYPELCYLV 613
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PGYPDLLPIV 10
P YP+L +V
Sbjct: 604 PNYPELCYLV 613
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 GYPDLLPIV 10
G PD PIV
Sbjct: 749 GTPDQPPIV 757
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 DLLPIV 10
DL+PIV
Sbjct: 292 DLIPIV 297
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 DLLPIV 10
DL+PIV
Sbjct: 292 DLIPIV 297
>sp|BTRF1_EBVG|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 PDLLPI 9
PDLLP+
Sbjct: 251 PDLLPL 256
>sp|BTRF1_EBVB9|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PDLLPI 9
PDLLP+
Sbjct: 251 PDLLPL 256
>sp|BTRF1_EBVA8|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 PDLLPI 9
PDLLP+
Sbjct: 251 PDLLPL 256
55|SequenceR|280|271|PDSGAPGYPD
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 DSGAPGYP 9
D+ PGYP
Sbjct: 5971 DATVPGYP 5978
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 1 PDSGAPGYP 9
P +G+PG P
Sbjct: 337 PITGSPGAP 345
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 PDSGAPGYP 9
P +G+PG P
Sbjct: 338 PITGSPGAP 346
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 1 PDSGAPGYP 9
P +G+PG P
Sbjct: 337 PITGSPGAP 345
>sp|CAP8_ADE41|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 41
Query: 1 PDSGAPG-YPD 10
P SGAPG YPD
Sbjct: 206 PFSGAPGLYPD 216
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 2 DSGAPG 7
D+GAPG
Sbjct: 603 DAGAPG 608
>sp|CAP8_ADE40|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 40
Query: 1 PDSGAPG-YPD 10
P SGAPG YPD
Sbjct: 206 PFSGAPGLYPD 216
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 PDSGAPGYP 9
P +G+PG P
Sbjct: 339 PITGSPGAP 347
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 SGAPGYPD 10
S AP +PD
Sbjct: 339 SSAPAFPD 346
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 1 PDSGAPGYP 9
P +G+PG P
Sbjct: 339 PITGSPGAP 347
>sp|PG095_VARV|ENTRY-FUSION complex associated protein OPG095|Variola virus
Query: 4 GAPGYP 9
GAPG P
Sbjct: 138 GAPGSP 143
>sp|PG095_VAR67|ENTRY-FUSION complex associated protein OPG095|Variola virus (isolate
Query: 4 GAPGYP 9
GAPG P
Sbjct: 138 GAPGSP 143
>sp|PG095_VACCC|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain
Query: 4 GAPGYP 9
GAPG P
Sbjct: 138 GAPGSP 143
>sp|PG095_VACCA|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain Ankara)
Query: 4 GAPGYP 9
GAPG P
Sbjct: 138 GAPGSP 143
>sp|PG095_MONPV|ENTRY-FUSION complex associated protein OPG095|Monkeypox virus (MPXV)
Query: 4 GAPGYP 9
GAPG P
Sbjct: 138 GAPGSP 143
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 4 GAPGYP 9
G PGYP
Sbjct: 77 GKPGYP 82
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 APGYP 9
+PGYP
Sbjct: 1849 SPGYP 1853
>sp|VP2_POVWU|MINOR capsid protein VP2|WU polyomavirus (WUPyV)
Query: 2 DSGAPGYPD 10
++G PG PD
Sbjct: 155 ETGIPGVPD 163
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 APGYP 9
+PGYP
Sbjct: 1849 SPGYP 1853
>sp|VP2_POVK6|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 60)
Query: 2 DSGAPGYPD 10
++G PG PD
Sbjct: 155 ETGIPGIPD 163
>sp|VP2_POVK3|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 380)
Query: 2 DSGAPGYPD 10
++G PG PD
Sbjct: 155 ETGIPGIPD 163
>sp|VP2_POVKI|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 350)
Query: 2 DSGAPGYPD 10
++G PG PD
Sbjct: 155 ETGIPGIPD 163
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 PDSGAP 6
PDS AP
Sbjct: 1831 PDSNAP 1836
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 PDSGAP 6
PDS AP
Sbjct: 1831 PDSNAP 1836
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 PDSGAP 6
PDS AP
Sbjct: 1831 PDSNAP 1836
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 PDSGAP 6
PDS AP
Sbjct: 1824 PDSNAP 1829
>sp|HEX8_ADE03|HEXON-ASSOCIATED protein|Human adenovirus B serotype 3
Query: 1 PDSGAPG-YPD 10
P SG+PG YPD
Sbjct: 108 PFSGSPGQYPD 118
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 PDSGAP 6
PDS AP
Sbjct: 1831 PDSNAP 1836
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PDSGAPGY 8
P+S AP Y
Sbjct: 392 PESVAPAY 399
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 2 DSGAPGYPD 10
D +PG PD
Sbjct: 53 DMHSPGAPD 61
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DSGAPGYPD 10
D +PG PD
Sbjct: 53 DMHSPGAPD 61
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 2 DSGAPGYPD 10
D +PG PD
Sbjct: 53 DMHSPGAPD 61
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PDSGAPGY 8
P+S AP Y
Sbjct: 392 PESVAPAY 399
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 5 APGYPD 10
APG PD
Sbjct: 609 APGSPD 614
>sp|CAP8_ADE12|PRE-HEXON-LINKING protein VIII|Human adenovirus A serotype 12
Query: 1 PDSGAPG-YPD 10
P SG+PG YPD
Sbjct: 206 PFSGSPGHYPD 216
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 5 APGYPD 10
APG+PD
Sbjct: 426 APGHPD 431
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 GAPGY 8
G+PGY
Sbjct: 3084 GSPGY 3088
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 GAPGY 8
G+PGY
Sbjct: 3110 GSPGY 3114
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 GAPGY 8
G+PGY
Sbjct: 3084 GSPGY 3088
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 GAPGY 8
G+PGY
Sbjct: 3110 GSPGY 3114
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 2 DSGAPGY 8
D+G PG+
Sbjct: 559 DNGDPGF 565
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 1 PDSGAPG 7
PD GAPG
Sbjct: 65 PDGGAPG 71
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PDSGAPGYPD 10
PD P +PD
Sbjct: 72 PDWQTPKFPD 81
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 1 PDSGAPGYPD 10
PD P +PD
Sbjct: 72 PDWLTPSFPD 81
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 GAPGYP 9
G PGYP
Sbjct: 77 GKPGYP 82
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 GAPGYP 9
G PGYP
Sbjct: 77 GKPGYP 82
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 GAPGYP 9
G PGYP
Sbjct: 77 GQPGYP 82
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 GAPGYP 9
G PGYP
Sbjct: 77 GQPGYP 82
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 GAPGYP 9
G PGYP
Sbjct: 77 GKPGYP 82
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 1 PDSGAPGYPD 10
PD P +PD
Sbjct: 72 PDWLTPSFPD 81
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 1 PDSGAPGYPD 10
PD P +PD
Sbjct: 72 PDWLTPSFPD 81
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 GAPGYP 9
G PGYP
Sbjct: 77 GQPGYP 82
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 4 GAPGYP 9
G PGYP
Sbjct: 77 GKPGYP 82
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 GAPGYP 9
G PGYP
Sbjct: 77 GQPGYP 82
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 2 DSGAPGYPD 10
D+ APG PD
Sbjct: 1152 DAMAPGAPD 1160
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 4 GAPGYP 9
G PGYP
Sbjct: 77 GRPGYP 82
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 1 PDSGAPGYPD 10
PD G+PD
Sbjct: 105 PDPNKFGFPD 114
>sp|US10_HHV2H|VIRION protein US10|Human herpesvirus 2 (strain HG52)
Query: 4 GAPGYPD 10
G+PG+P+
Sbjct: 42 GSPGFPE 48
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 GAPGYP 9
G PGYP
Sbjct: 77 GRPGYP 82
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 2 DSGAPGYPD 10
D+ APG PD
Sbjct: 1180 DAMAPGAPD 1188
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 PDSGAPG 7
PD+G PG
Sbjct: 709 PDAGGPG 715
>sp|TRM2_HHV11|TRIPARTITE terminase subunit 2|Human herpesvirus 1 (strain 17)
Query: 2 DSGAPGYPD 10
D+ AP PD
Sbjct: 90 DAAAPQTPD 98
56|SequenceR|285|276|LFELSPDSGA
>sp|B4_HHV6Z|PROTEIN B4|Human herpesvirus 6B (strain Z29)
Query: 1 LFELSPDSGA 10
+F LSP SGA
Sbjct: 178 VFSLSPGSGA 187
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 FELSPDSGA 10
FE+SPD+ A
Sbjct: 61 FEVSPDAVA 69
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 FELSPDSGA 10
FE+SPD+ A
Sbjct: 61 FEVSPDAVA 69
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 FELSPDSGA 10
FE+SPD+ A
Sbjct: 61 FEVSPDAVA 69
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 2 FELSPDSGA 10
F+L P SG+
Sbjct: 417 FQLDPGSGS 425
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 4 LSPDSGA 10
LSP SGA
Sbjct: 758 LSPRSGA 764
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 4 LSPDSGA 10
LSP SGA
Sbjct: 758 LSPRSGA 764
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 2 FELSPD 7
+ELSPD
Sbjct: 616 YELSPD 621
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 2 FELSPD 7
+ELSPD
Sbjct: 616 YELSPD 621
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 2 FELSPD 7
+ELSPD
Sbjct: 616 YELSPD 621
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 2 FELSPD 7
+ELSPD
Sbjct: 616 YELSPD 621
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 2 FELSPD 7
+ELSPD
Sbjct: 616 YELSPD 621
>sp|NCAP_CVHOC|NUCLEOPROTEIN coronavirus OC43 (HCoV-OC43)
Query: 1 LFELSPDSGA 10
L EL+P +GA
Sbjct: 313 LAELAPTAGA 322
57|SequenceR|290|281|EESVVLFELS
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 ESVVLFELS 10
+SVV FEL+
Sbjct: 1281 DSVVTFELT 1289
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 ESVVLFELS 10
+SVV FEL+
Sbjct: 1281 DSVVTFELT 1289
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 ESVVLFELS 10
+SVV FEL+
Sbjct: 1279 DSVVTFELT 1287
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 ESVVLFELS 10
+SVV FEL+
Sbjct: 1281 DSVVTFELT 1289
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 ESVVLFELS 10
+SVV FEL+
Sbjct: 1281 DSVVTFELT 1289
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 ESVVLFELS 10
+SVV FEL+
Sbjct: 1281 DSVVTFELT 1289
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 1 EESVVLFEL 9
EE+V +F+L
Sbjct: 99 EENVKIFDL 107
58|SequenceR|295|286|GGRYTEESVV
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GRYTEESVV 10
GRY+EES +
Sbjct: 418 GRYSEESSI 426
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 2 GRYTEESVV 10
G+Y+EES +
Sbjct: 436 GKYSEESSI 444
>sp|NEF_HV1Z2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GGR+++ S+V
Sbjct: 2 GGRWSKSSIV 11
>sp|NEF_HV1Z6|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GGR+++ S+V
Sbjct: 2 GGRWSKSSIV 11
>sp|NEF_HV1J3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ SVV
Sbjct: 2 GGKWSKRSVV 11
>sp|NEF_HV1SC|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ SVV
Sbjct: 2 GGKWSKRSVV 11
>sp|NEF_HV1MA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ S+V
Sbjct: 2 GGKWSKSSIV 11
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ S+V
Sbjct: 2 GGKWSKSSIV 11
>sp|NEF_HV112|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ SVV
Sbjct: 2 GGKWSKSSVV 11
>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)
Query: 1 GGRYTE 6
GGRY E
Sbjct: 70 GGRYIE 75
>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GGRYTE 6
GGRY E
Sbjct: 70 GGRYIE 75
>sp|PG115_VACCA|CORE protein OPG115|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GGRYTE 6
GGRY E
Sbjct: 70 GGRYIE 75
>sp|PG115_MONPV|CORE protein OPG115|Monkeypox virus (MPXV)
Query: 1 GGRYTE 6
GGRY E
Sbjct: 70 GGRYIE 75
>sp|D3_VARV|CORE protein D3|Variola virus
Query: 1 GGRYTE 6
GGRY E
Sbjct: 70 GGRYIE 75
>sp|D3_VAR67|CORE protein D3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 GGRYTE 6
GGRY E
Sbjct: 70 GGRYIE 75
>sp|NEF_HV1LA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ SVV
Sbjct: 2 GGKWSKSSVV 11
>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ SVV
Sbjct: 2 GGKWSKSSVV 11
>sp|NEF_HV1BR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ SVV
Sbjct: 2 GGKWSKSSVV 11
>sp|NEF_HV1H3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ SVV
Sbjct: 2 GGKWSKSSVV 11
>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ S+V
Sbjct: 2 GGKWSKSSIV 11
>sp|NEF_HV197|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ S+V
Sbjct: 2 GGKWSKSSIV 11
>sp|NEF_HV196|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ S+V
Sbjct: 2 GGKWSKSSIV 11
>sp|NEF_HV1M2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ S+V
Sbjct: 2 GGKWSKSSIV 11
>sp|NEF_HV1B1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ SV+
Sbjct: 2 GGKWSKSSVI 11
>sp|NEF_HV1VI|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ S+V
Sbjct: 2 GGKWSKSSIV 11
>sp|NEF_HV1LW|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ SV+
Sbjct: 2 GGKWSKSSVI 11
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 GRYTEESVV 10
G+Y++ES +
Sbjct: 20 GKYSDESRI 28
>sp|NEF_HV1MP|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ S+V
Sbjct: 2 GGKWSKSSIV 11
>sp|NEF_HV1H2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ SV+
Sbjct: 2 GGKWSKSSVI 11
>sp|NEF_HV1EL|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ S+V
Sbjct: 2 GGKWSKSSIV 11
>sp|NEF_HV193|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGRYTEESVV 10
GG++++ S+V
Sbjct: 2 GGKWSKSSIV 11
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 GGRYTEESVV 10
GG YT +++
Sbjct: 1016 GGAYTHATII 1025
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 GGRYTEESVV 10
GG YT +++
Sbjct: 1016 GGAYTHATII 1025
59|SequenceR|300|291|RNIAMGGRYT
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 4 AMGGRY 9
AMGG+Y
Sbjct: 936 AMGGKY 941
>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P
Query: 2 NIAMGG 7
NIA+GG
Sbjct: 123 NIAVGG 128
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 4 AMGGRYT 10
A+GG YT
Sbjct: 460 ALGGLYT 466
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RNIAMGGRY 9
RN+A RY
Sbjct: 354 RNLAFAWRY 362
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RNIAMGGRY 9
RN+A RY
Sbjct: 354 RNLAFAWRY 362
60|SequenceR|305|296|NELRFRNIAM
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 1 NELRFRNIAM 10
N L+FRN+++
Sbjct: 494 NRLQFRNVSL 503
>sp|US30_HCMVA|UNCHARACTERIZED protein HHRF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LRFRNI 8
LRFRN+
Sbjct: 12 LRFRNV 17
>sp|US30_HCMVM|UNCHARACTERIZED protein US30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LRFRNI 8
LRFRN+
Sbjct: 12 LRFRNV 17
>sp|U150A_HCMVM|UNCHARACTERIZED protein UL150A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NELRFRNI 8
+ELR RNI
Sbjct: 18 SELRRRNI 25
61|SequenceR|310|301|LEELDNELRF
>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate
Query: 1 LEELDNELRF 10
EE+DNEL +
Sbjct: 13 FEEIDNELDY 22
>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 1 LEELDNELRF 10
EE+DNEL +
Sbjct: 13 FEEIDNELDY 22
>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 1 LEELDNELRF 10
EE+DNEL +
Sbjct: 13 FEEIDNELDY 22
>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)
Query: 1 LEELDNELRF 10
EE+DNEL +
Sbjct: 13 FEEIDNELDY 22
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 LEELDNELRF 10
E D+ELRF
Sbjct: 905 FEAPDDELRF 914
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 1 LEELDNELR 9
L+E D ELR
Sbjct: 447 LQERDRELR 455
>sp|BZLF1_EBVG|LYTIC switch protein BZLF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LEELDNEL 8
LEE D+EL
Sbjct: 168 LEECDSEL 175
>sp|BZLF1_EBVB9|LYTIC switch protein BZLF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LEELDNEL 8
LEE D+EL
Sbjct: 168 LEECDSEL 175
>sp|BZLF1_EBVA8|LYTIC switch protein BZLF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LEELDNEL 8
LEE D+EL
Sbjct: 168 LEECDSEL 175
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LEELDNELR 9
LEE D ELR
Sbjct: 221 LEENDVELR 229
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 2 EELDNELR 9
EEL NE R
Sbjct: 203 EELRNEFR 210
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LEELDNELR 9
LEE D ELR
Sbjct: 221 LEENDVELR 229
>sp|LHDAG_HDVD3|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 1 LEELDNELR 9
LEEL+ +LR
Sbjct: 27 LEELERDLR 35
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 LEELDNELR 9
LEE D ELR
Sbjct: 221 LEENDVELR 229
>sp|LHDAG_HDVIT|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 1 LEELDNELR 9
LEEL+ +LR
Sbjct: 27 LEELERDLR 35
>sp|X_HBVD5|PROTEIN X|Hepatitis B virus genotype D
Query: 2 EELDNELRF 10
EEL ELR
Sbjct: 121 EELGEELRL 129
>sp|LHDAG_HDVM2|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 1 LEELDNELR 9
LEEL+ +LR
Sbjct: 27 LEELERDLR 35
>sp|LHDAG_HDVM1|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 1 LEELDNELR 9
LEEL+ +LR
Sbjct: 27 LEELERDLR 35
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 EELDNE 7
E+LDNE
Sbjct: 401 EDLDNE 406
>sp|LHDAG_HDVWO|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 1 LEELDNELR 9
LEEL+ +LR
Sbjct: 27 LEELERDLR 35
>sp|PG172_VARV|PROTEIN A43|Variola virus
Query: 1 LEELDNELRF 10
++ELDN + F
Sbjct: 71 VDELDNNVFF 80
>sp|PG172_VAR67|PROTEIN A43|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LEELDNELRF 10
++ELDN + F
Sbjct: 71 VDELDNNVFF 80
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LEELDNELR 9
LE++ N+LR
Sbjct: 348 LEQIANKLR 356
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 4 LDNELR 9
LDN+LR
Sbjct: 182 LDNDLR 187
>sp|SHDAG_HDVD3|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 1 LEELDNELR 9
LEEL+ +LR
Sbjct: 27 LEELERDLR 35
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 1 LEELDNELRF 10
L +DN +RF
Sbjct: 448 LHYMDNPVRF 457
>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 LEELDNELR 9
+EE+D E R
Sbjct: 124 VEEIDKEAR 132
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 1 LEELDNELRF 10
+EELDN F
Sbjct: 522 IEELDNSSPF 531
62|SequenceR|315|306|IQYLALEELD
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL+ L
Sbjct: 145 LQYLALKAL 153
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL+ L
Sbjct: 145 LQYLALKVL 153
>sp|VIF_HV1Z6|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALTAL 153
>sp|VIF_HV1Z2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALTAL 153
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALTAL 153
>sp|VIF_HV1VI|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALTAL 153
>sp|VIF_HV1V9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALTAL 153
>sp|VIF_HV1SC|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 62 LQYLALTAL 70
>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALTAL 153
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALTAL 153
>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALAAL 153
>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALAAL 153
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALAAL 153
>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALAAL 153
>sp|VIF_HV1MP|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 146 LQYLALTAL 154
>sp|VIF_HV1MN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALTAL 153
>sp|VIF_HV1MA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALTAL 153
>sp|VIF_HV1M2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 146 LQYLALTAL 154
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALAAL 153
>sp|VIF_HV1ET|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALTAL 153
>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALTAL 153
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALAAL 153
>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALAAL 153
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALAAL 153
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALAAL 153
>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALAAL 153
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALTAL 153
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALTAL 153
>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALTAL 153
>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALTAL 153
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLALEEL 9
+QYLAL L
Sbjct: 145 LQYLALAAL 153
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 QYLALEE 8
QYL LEE
Sbjct: 757 QYLHLEE 763
>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLAL 6
+QYLAL
Sbjct: 145 LQYLAL 150
>sp|VIF_HV1JR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLAL 6
+QYLAL
Sbjct: 145 LQYLAL 150
>sp|VIF_HV192|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 IQYLAL 6
+QYLAL
Sbjct: 145 LQYLAL 150
63|SequenceR|320|311|DKLLQIQYLA
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 4 LQIQYL 9
LQ+QYL
Sbjct: 73 LQVQYL 78
64|SequenceR|325|316|ETHRLDKLLQ
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 3 HRLDKLLQ 10
H DKLLQ
Sbjct: 978 HYFDKLLQ 985
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 3 HRLDKLLQ 10
H DKLLQ
Sbjct: 978 HYFDKLLQ 985
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 3 HRLDKLLQ 10
H DKLLQ
Sbjct: 978 HYFDKLLQ 985
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 3 HRLDKLL 9
HRLD+LL
Sbjct: 115 HRLDELL 121
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 3 HRLDKLL 9
HRLD+LL
Sbjct: 115 HRLDELL 121
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 ETHRLDKLLQ 10
ET+ LDK +Q
Sbjct: 177 ETYVLDKAMQ 186
65|SequenceR|330|321|KDEENETHRL
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 EENETH 8
EENE H
Sbjct: 2294 EENEVH 2299
Query: 2 DEENETH 8
DEE E H
Sbjct: 2967 DEERECH 2973
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 DEENETH 8
DEE E H
Sbjct: 2966 DEEREAH 2972
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 DEENETH 8
DEE E H
Sbjct: 2963 DEEREAH 2969
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 DEENETH 8
DEE E H
Sbjct: 2967 DEERENH 2973
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 DEENETH 8
DEE E H
Sbjct: 2962 DEEREAH 2968
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 DEENETH 8
DEE E H
Sbjct: 2965 DEERENH 2971
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 DEENETH 8
DEE E H
Sbjct: 2965 DEERENH 2971
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 DEENETH 8
DEE E H
Sbjct: 2965 DEERENH 2971
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 DEENETH 8
DEE E H
Sbjct: 2965 DEERENH 2971
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 DEENETH 8
DEE E H
Sbjct: 2966 DEEREAH 2972
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 ENETHR 9
EN+THR
Sbjct: 409 ENKTHR 414
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 2 DEENET 7
DEEN+T
Sbjct: 431 DEENDT 436
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 DEENETH 8
DEE E H
Sbjct: 2950 DEERERH 2956
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 DEENETHRL 10
D E E H+L
Sbjct: 2925 DRERELHKL 2933
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 DEENETH 8
DEE E H
Sbjct: 2950 DEERERH 2956
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 DEENETHRL 10
D E E H+L
Sbjct: 2925 DRERELHKL 2933
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 DEENETHRL 10
D E E H+L
Sbjct: 2925 DRERELHKL 2933
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 DEENETHRL 10
D E E H+L
Sbjct: 2925 DRERELHKL 2933
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 DEENETHRL 10
D E E H+L
Sbjct: 2925 DRERELHKL 2933
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 DEENETH 8
DEE E H
Sbjct: 2948 DEERERH 2954
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 DEENETH 8
DEE E H
Sbjct: 2948 DEERERH 2954
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 DEENETH 8
DEE E H
Sbjct: 2948 DEERERH 2954
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 DEENETH 8
DEE E H
Sbjct: 2948 DEERERH 2954
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 DEENETH 8
DEE E H
Sbjct: 2946 DEERERH 2952
>sp|US9_VZVO|ENVELOPE protein US9|Varicella-zoster virus (strain Oka vaccine)
Query: 2 DEENET 7
D ENET
Sbjct: 47 DSENET 52
>sp|US9_VZVD|ENVELOPE protein US9|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 DEENET 7
D ENET
Sbjct: 47 DSENET 52
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 DEENETHRL 10
DE N HR+
Sbjct: 394 DERNRYHRV 402
66|SequenceR|335|326|SSSSVKDEEN
>sp|PG001_MONPV|CHEMOKINE-BINDING protein|Monkeypox virus (MPXV)
Query: 1 SSSSVKDEEN 10
SSSS +EEN
Sbjct: 24 SSSSCTEEEN 33
67|SequenceR|340|331|MRQRFSSSSV
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 RQRFSSS 8
RQRFS+S
Sbjct: 1050 RQRFSTS 1056
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 2 RQRFSSS 8
RQRFS+S
Sbjct: 1126 RQRFSTS 1132
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 2 RQRFSSS 8
RQRFS+S
Sbjct: 1126 RQRFSTS 1132
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 2 RQRFSSS 8
R+RFS+S
Sbjct: 1121 RERFSTS 1127
68|SequenceR|345|336|LLNGLMRQRF
>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)
Query: 2 LNGLMRQR 9
+NG +RQR
Sbjct: 228 MNGKLRQR 235
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 LLNGLMR 7
LL+GLMR
Sbjct: 1404 LLDGLMR 1410
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 LLNGLMR 7
LL+GLMR
Sbjct: 1404 LLDGLMR 1410
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 LLNGLMR 7
LL+GLMR
Sbjct: 1404 LLDGLMR 1410
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 LLNGLMR 7
LL+GLMR
Sbjct: 1404 LLDGLMR 1410
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 LLNGLMR 7
LL+GLMR
Sbjct: 1404 LLDGLMR 1410
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 LLNGLMR 7
LL+GLMR
Sbjct: 1404 LLDGLMR 1410
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 LLNGLMR 7
LL+GLMR
Sbjct: 1404 LLDGLMR 1410
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 LNGLMRQRF 10
L +MRQ F
Sbjct: 878 LQNMMRQHF 886
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 LNGLMRQRF 10
L +MRQ F
Sbjct: 878 LQNMMRQHF 886
>sp|UL141_HCMVM|PROTEIN UL141|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 NGLMRQRF 10
+GL+ QRF
Sbjct: 150 HGLIMQRF 157
69|SequenceR|350|341|EYPPRLLNGL
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 EYPPRLLNGL 10
E PPR+ N L
Sbjct: 1626 EMPPRIQNPL 1635
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 EYPPRLLNGL 10
E PPR+ N L
Sbjct: 1626 EMPPRIQNPL 1635
>sp|U78_HHV6U|UNCHARACTERIZED protein U78|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EYPPRL 6
E+PPRL
Sbjct: 21 EFPPRL 26
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 EYPPRLLNGL 10
E PPR+ N L
Sbjct: 1626 EMPPRIQNPL 1635
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 EYPPRLLNGL 10
E PPR+ N L
Sbjct: 1626 EMPPRIQNPL 1635
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 2 YPPRLLNGL 10
+ PRL+NG+
Sbjct: 286 FIPRLINGI 294
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 EYPPRLLNGL 10
E PPR+ N L
Sbjct: 1626 EVPPRIQNPL 1635
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 EYPPRLLNGL 10
EY RL+NG
Sbjct: 411 EYATRLVNGF 420
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 EYPPRLLNGL 10
EY RL+NG
Sbjct: 409 EYATRLVNGF 418
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EYPPRLLNG 9
+ PP LLNG
Sbjct: 283 QVPPGLLNG 291
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 YPPRLLNGL 10
+PPR+ +GL
Sbjct: 2603 FPPRVGHGL 2611
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 YPPRLLNGL 10
+PPR+ +GL
Sbjct: 2576 FPPRVGHGL 2584
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 YPPRLLNGL 10
+PPR+ +GL
Sbjct: 2581 FPPRVGHGL 2589
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 YPPRL 6
YPP+L
Sbjct: 1854 YPPKL 1858
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 2 YPPRLLNG 9
YP + +NG
Sbjct: 106 YPGKFVNG 113
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 YPPRL 6
YPP+L
Sbjct: 1862 YPPKL 1866
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 1 EYPPRLLNG 9
EYP L+G
Sbjct: 202 EYPDSCLDG 210
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 4 PRLLNG 9
P+L+NG
Sbjct: 375 PKLING 380
70|SequenceR|355|346|PLEPREYPPR
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 LEPREYPP 9
LE REYPP
Sbjct: 689 LENREYPP 696
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 LEPREYPP 9
LE REYPP
Sbjct: 689 LENREYPP 696
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 EPREYPPR 10
EPR +PPR
Sbjct: 431 EPRAFPPR 438
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 LEPREYPP 9
L REYPP
Sbjct: 688 LSNREYPP 695
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 LEPREYPP 9
L REYPP
Sbjct: 688 LSNREYPP 695
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 3 EPREYPPR 10
+PR +PPR
Sbjct: 431 DPRAFPPR 438
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 EPREYPPR 10
+PR++PP+
Sbjct: 448 DPRQFPPQ 455
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Dumas)
Query: 1 PLEPREY 7
PL PREY
Sbjct: 1049 PLSPREY 1055
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 PLEPREY 7
PL PREY
Sbjct: 1049 PLSPREY 1055
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 5 REYPPR 10
REY PR
Sbjct: 348 REYKPR 353
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 REYPP 9
R+YPP
Sbjct: 1880 RKYPP 1884
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 EPREYPP 9
+PR++PP
Sbjct: 2277 KPRKFPP 2283
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 EPREYPP 9
+PR+ PP
Sbjct: 1205 DPRDNPP 1211
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 EPREYPP 9
+PR+ PP
Sbjct: 1205 DPRDNPP 1211
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LEPREYPPR 10
LEP Y P+
Sbjct: 2394 LEPISYDPK 2402
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LEPREYPPR 10
LEP Y P+
Sbjct: 2394 LEPISYDPK 2402
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LEPREYPPR 10
LEP Y P+
Sbjct: 2394 LEPISYDPK 2402
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LEPREYPPR 10
LEP Y P+
Sbjct: 2394 LEPISYDPK 2402
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LEPREYPPR 10
LEP Y P+
Sbjct: 2394 LEPISYDPK 2402
>sp|Z_SABVB|RING finger protein Z|Sabia mammarenavirus (isolate
Query: 1 PLEPREYPP 9
P+EP PP
Sbjct: 90 PIEPSAPPP 98
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 PLEPREY 7
P E REY
Sbjct: 331 PAETREY 337
71|SequenceR|360|351|VYLCTPLEPR
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 624 LCNPLNP 630
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 LCTPLEP 9
+CTP EP
Sbjct: 456 ICTPDEP 462
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
+C PL P
Sbjct: 624 ICNPLNP 630
>sp|RDRP_I82A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LCTPLEP 9
LC PL P
Sbjct: 28 LCNPLNP 34
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 YLCTPLEPR 10
Y+ PL PR
Sbjct: 145 YIHVPLSPR 153
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 YLCTPLEPR 10
Y+ PL PR
Sbjct: 144 YIHVPLSPR 152
>sp|DR8_HHV6U|UNCHARACTERIZED protein DR8|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VYLCTPLEPR 10
++L PL PR
Sbjct: 67 IHLRNPLSPR 76
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 3 LCTPLE 8
LC PLE
Sbjct: 446 LCNPLE 451
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 1 VYLCTPLEPR 10
V+L TP+ R
Sbjct: 280 VFLSTPITSR 289
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 YLCTPLEPR 10
Y+ PL PR
Sbjct: 144 YVHVPLSPR 152
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 1 VYLCTPLE 8
V LC PLE
Sbjct: 182 VGLCPPLE 189
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 3 LCTPLEPR 10
LC P+E R
Sbjct: 185 LCPPIELR 192
>sp|BNL2B_EBVA8|UNCHARACTERIZED protein BNLF2b|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VYLCTPLEP 9
+ C PLEP
Sbjct: 68 IQRCHPLEP 76
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 1 VYLCTPLEP 9
VY+C ++P
Sbjct: 128 VYICQSIDP 136
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 LCTPLEPR 10
+CT L+PR
Sbjct: 21 VCTRLDPR 28
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 3 LCTPLE 8
LC PLE
Sbjct: 184 LCPPLE 189
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 VYLCTPLEP 9
VY C LEP
Sbjct: 2656 VYQCCDLEP 2664
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 3 LCTPLE 8
LC PLE
Sbjct: 185 LCPPLE 190
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 YLCTPLEPR 10
Y+ PL PR
Sbjct: 144 YIHVPLSPR 152
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 VYLCTPLEP 9
VY C LEP
Sbjct: 2669 VYQCCNLEP 2677
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 3 LCTPLE 8
LC PLE
Sbjct: 184 LCPPLE 189
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 YLCTPLEPR 10
Y+ PL PR
Sbjct: 145 YIHVPLSPR 153
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 YLCTPLEPR 10
Y+ PL PR
Sbjct: 144 YVHVPLSPR 152
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 VYLCTPLEP 9
+Y C LEP
Sbjct: 2671 IYQCCDLEP 2679
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 1 VYLCTPLEPR 10
++ +PL PR
Sbjct: 122 IFFVSPLPPR 131
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 VYLCTP 6
+YLC P
Sbjct: 2770 MYLCLP 2775
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 VYLCTP 6
+YLC P
Sbjct: 2770 MYLCLP 2775
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 VYLCTPLEP 9
+Y C LEP
Sbjct: 2669 IYQCCNLEP 2677
72|SequenceR|365|356|GTLGIVYLCT
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 GTLGIVYLCT 10
GT G+V+ CT
Sbjct: 2481 GTAGVVWNCT 2490
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 GTLGIVYLC 9
G+LGI Y C
Sbjct: 1240 GSLGISYKC 1248
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 3 LGIVYLC 9
LGI++LC
Sbjct: 326 LGIIFLC 332
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 3 LGIVYLC 9
LGI++LC
Sbjct: 325 LGIIFLC 331
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 3 LGIVYLC 9
LGI++LC
Sbjct: 325 LGIIFLC 331
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 3 LGIVYLC 9
LGI++LC
Sbjct: 325 LGIIFLC 331
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 3 LGIVYLC 9
LGI++LC
Sbjct: 326 LGIIFLC 332
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 3 LGIVYLC 9
LGI++LC
Sbjct: 325 LGIIFLC 331
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 3 LGIVYLC 9
LGI++LC
Sbjct: 325 LGIIFLC 331
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 3 LGIVYLC 9
LGI++LC
Sbjct: 325 LGIIFLC 331
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 TLGIVYL 8
TLGIVY+
Sbjct: 1498 TLGIVYV 1504
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 TLGIVYL 8
TLGIVY+
Sbjct: 1499 TLGIVYV 1505
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 1 GTLGIVYL 8
G LG+VY+
Sbjct: 136 GELGVVYI 143
>sp|UL24_HHV11|PROTEIN UL24|Human herpesvirus 1 (strain 17)
Query: 5 IVYLC 9
IVYLC
Sbjct: 142 IVYLC 146
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 2 TLGIVYLC 9
T+G+ ++C
Sbjct: 551 TMGLAFIC 558
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 3 LGIVYLC 9
+G+V++C
Sbjct: 545 MGLVFMC 551
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 3 LGIVYLC 9
+G+V++C
Sbjct: 545 MGLVFMC 551
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 3 LGIVYLC 9
+G+V++C
Sbjct: 552 MGLVFIC 558
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 3 LGIVYLC 9
+G+V++C
Sbjct: 552 MGLVFIC 558
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 1 GTLGIVYLCT 10
GT+ +V +C+
Sbjct: 500 GTIPVVQICS 509
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 GIVYLC 9
GIV++C
Sbjct: 3757 GIVFMC 3762
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 3 LGIVYLC 9
+G+V++C
Sbjct: 545 MGLVFIC 551
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 LGIVYLC 9
+GI YLC
Sbjct: 7003 IGINYLC 7009
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 LGIVYLC 9
+G+V++C
Sbjct: 542 MGLVFIC 548
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 1 GTLGIV 6
GTLG+V
Sbjct: 31 GTLGVV 36
>sp|UL24_HHV2H|PROTEIN UL24|Human herpesvirus 2 (strain HG52)
Query: 5 IVYLC 9
+VYLC
Sbjct: 153 VVYLC 157
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 GIVYLC 9
GIV++C
Sbjct: 3757 GIVFMC 3762
>sp|TEG6_HHV11|TEGUMENT protein UL55|Human herpesvirus 1 (strain 17)
Query: 4 GIVYLC 9
GIVY C
Sbjct: 136 GIVYHC 141
>sp|TEG6_HHV1E|TEGUMENT protein UL55|Human herpesvirus 1 (strain HFEM)
Query: 4 GIVYLC 9
GIVY C
Sbjct: 136 GIVYHC 141
>sp|VE7_HPV16|PROTEIN E7|Human papillomavirus type 16
Query: 1 GTLGIV 6
GTLGIV
Sbjct: 85 GTLGIV 90
>sp|TEG6_HHV2H|TEGUMENT protein UL55|Human herpesvirus 2 (strain HG52)
Query: 4 GIVYLC 9
GIVY C
Sbjct: 134 GIVYHC 139
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 LGIVYLCT 10
LG+V +C+
Sbjct: 21 LGLVIICS 28
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 LGIVYLCT 10
LG+V +C+
Sbjct: 21 LGLVIICS 28
73|SequenceR|370|361|GSGSIGTLGI
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3091 GSGQVGTYGL 3100
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3091 GSGQVGTYGL 3100
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3091 GSGQVGTYGL 3100
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3091 GSGQVGTYGL 3100
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3088 GSGQVGTYGL 3097
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3091 GSGQVGTYGL 3100
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3091 GSGQVGTYGL 3100
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3089 GSGQVGTYGL 3098
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3089 GSGQVGTYGL 3098
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3089 GSGQVGTYGL 3098
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3087 GSGQVGTYGL 3096
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3087 GSGQVGTYGL 3096
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3087 GSGQVGTYGL 3096
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3089 GSGQVGTYGL 3098
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3092 GSGQVGTYGL 3101
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3087 GSGQVGTYGL 3096
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3092 GSGQVGTYGL 3101
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3087 GSGQVGTYGL 3096
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GSGSIGTLGI 10
GSG +GT G+
Sbjct: 3089 GSGQLGTYGL 3098
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 4 SIGTLGI 10
SIGTLG+
Sbjct: 1313 SIGTLGL 1319
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 4 SIGTLGI 10
SIGTLG+
Sbjct: 1313 SIGTLGL 1319
>sp|X_HBVD3|PROTEIN X|Hepatitis B virus genotype D
Query: 2 SGSIGTL 8
SGS+GTL
Sbjct: 31 SGSLGTL 37
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 GSGSIGT 7
GSG++GT
Sbjct: 536 GSGNVGT 542
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 GSGSIGT 7
GSG++GT
Sbjct: 536 GSGNVGT 542
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 GSGSIGT 7
G+G++GT
Sbjct: 537 GTGNVGT 543
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 GSGSIGT 7
G+G++GT
Sbjct: 537 GTGNVGT 543
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 1 GSGSIGTLGI 10
G+G+I +GI
Sbjct: 349 GNGTIQKIGI 358
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 1 GSGSIGTLGI 10
G+G+I +GI
Sbjct: 349 GNGTIQKIGI 358
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 GSGSIGTLGI 10
G+G+I +GI
Sbjct: 349 GNGTIQKIGI 358
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 GSGSIGTLGI 10
G+G+I +GI
Sbjct: 349 GNGTIQKIGI 358
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 SIGTLGI 10
++GTLG+
Sbjct: 775 TVGTLGL 781
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 SIGTLGI 10
++GTLG+
Sbjct: 773 TVGTLGL 779
74|SequenceR|375|366|AISSKGSGSI
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 AISSKGSGSI 10
++ S+G GS+
Sbjct: 311 SVGSQGKGSV 320
75|SequenceR|380|371|GKLRQAISSK
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 GKLRQAISS 9
GK+R+AI +
Sbjct: 2120 GKMREAIDT 2128
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 3 LRQAISS 9
LRQA+SS
Sbjct: 56 LRQAVSS 62
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GKLRQAISS 9
GK R AIS+
Sbjct: 14 GKFRGAIST 22
76|SequenceR|385|376|VFAGLGKLRQ
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 FAGLGKLRQ 10
F G+GK +Q
Sbjct: 418 FCGIGKHKQ 426
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 FAGLGKLRQ 10
F G+GK +Q
Sbjct: 418 FCGIGKHKQ 426
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 VFAGLGK 7
+F GLGK
Sbjct: 187 IFEGLGK 193
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 1 VFAGLGK 7
+F GLGK
Sbjct: 185 IFEGLGK 191
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 AGLGKLRQ 10
AGL +LRQ
Sbjct: 253 AGLRQLRQ 260
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 AGLGKLRQ 10
AGL +LRQ
Sbjct: 253 AGLRQLRQ 260
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 VFAGLGKL 8
V+A LGK+
Sbjct: 4211 VYASLGKI 4218
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 1 VFAGLG 6
+FAGLG
Sbjct: 731 MFAGLG 736
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 1 VFAGLG 6
+FAGLG
Sbjct: 731 MFAGLG 736
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 1 VFAGLG 6
+FAGLG
Sbjct: 730 MFAGLG 735
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 1 VFAGLG 6
+FAGLG
Sbjct: 731 MFAGLG 736
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 VFAGLGKL 8
V+A LGK+
Sbjct: 4236 VYAALGKV 4243
77|SequenceR|390|381|HDSDIVFAGL
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DSDIVFAGL 10
DSD VF GL
Sbjct: 78 DSDEVFTGL 86
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DSDIVFA 8
D+DIVFA
Sbjct: 40 DNDIVFA 46
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 2 DSDIVFA 8
D+DIVFA
Sbjct: 40 DNDIVFA 46
>sp|E4OR1_ADE09|E4-ORF1 adenovirus D serotype 9
Query: 3 SDIVFAG 9
SD++FAG
Sbjct: 75 SDVIFAG 81
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 2 DSDIVFAG 9
+SD+VF G
Sbjct: 34 NSDVVFPG 41
>sp|VL2_HPV28|MINOR capsid protein L2|Human papillomavirus 28
Query: 2 DSDIVFAG 9
D+DI F G
Sbjct: 362 DADIAFTG 369
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 SDIVFAG 9
SD+VF+G
Sbjct: 1490 SDLVFSG 1496
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 SDIVFAG 9
SD+VF+G
Sbjct: 1490 SDLVFSG 1496
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 SDIVFAG 9
SD+VF+G
Sbjct: 1490 SDLVFSG 1496
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 DSDIVFA 8
DSD VFA
Sbjct: 203 DSDAVFA 209
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 DSDIVFA 8
DSD VFA
Sbjct: 203 DSDAVFA 209
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DSDIVFA 8
DSD VFA
Sbjct: 203 DSDAVFA 209
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 SDIVFAGL 10
S +VFAGL
Sbjct: 1350 SPLVFAGL 1357
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 DSDIVFAG 9
D+D++F G
Sbjct: 238 DTDLLFMG 245
>sp|U150A_HCMVM|UNCHARACTERIZED protein UL150A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HDSDIV 6
HD DI+
Sbjct: 134 HDEDII 139
>sp|UL79_HHV7J|PROTEIN U52|Human herpesvirus 7 (strain JI)
Query: 1 HDSDIVFA 8
HD +I+F+
Sbjct: 145 HDGNIMFS 152
78|SequenceR|395|386|ARHGLHDSDI
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 ARHGLHDSDI 10
AR G DSD+
Sbjct: 2637 ARQGFVDSDV 2646
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 ARHGLHDSDI 10
AR G DSD+
Sbjct: 2637 ARQGFVDSDV 2646
>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)
Query: 2 RHGLHD 7
RHGL+D
Sbjct: 202 RHGLYD 207
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 ARHGLHDSD 9
AR LHD+D
Sbjct: 2108 ARANLHDAD 2116
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 ARHGLHDSD 9
AR LHD+D
Sbjct: 2108 ARANLHDAD 2116
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 ARHGLHDSD 9
AR LHD+D
Sbjct: 2108 ARANLHDAD 2116
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 ARHGLHDSD 9
AR LHD+D
Sbjct: 2108 ARANLHDAD 2116
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 ARHGLHDSD 9
AR LHD+D
Sbjct: 2108 ARANLHDAD 2116
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 ARHGLHDSD 9
AR LHD+D
Sbjct: 2108 ARANLHDAD 2116
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 ARHGLHDSD 9
AR LHD+D
Sbjct: 2108 ARANLHDAD 2116
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 ARHGLHDSD 9
AR LHD+D
Sbjct: 2108 ARANLHDAD 2116
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 ARHGLHDSD 9
AR LHD+D
Sbjct: 2108 ARANLHDAD 2116
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 HGLHDSDI 10
HG+ DSD+
Sbjct: 405 HGMLDSDL 412
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 HGLHDSDI 10
HG+ DSD+
Sbjct: 405 HGMLDSDL 412
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 3 HGLHDSDI 10
HG+ DSD+
Sbjct: 405 HGMLDSDL 412
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 HGLHDSDI 10
HG+ DSD+
Sbjct: 405 HGMLDSDL 412
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 HGLHDSDI 10
HG+ DSD+
Sbjct: 405 HGMLDSDL 412
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 HGLHDSDI 10
HG+ DSD+
Sbjct: 405 HGMLDSDL 412
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 ARHGLHDSDI 10
AR G+ D+D+
Sbjct: 2614 ARQGVVDTDV 2623
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 ARHGLHDSDI 10
AR G+ D+D+
Sbjct: 2614 ARQGVVDTDV 2623
>sp|NEF_HV193|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 ARHGLHDSD 9
++HG+ D D
Sbjct: 172 SQHGMEDED 180
>sp|PG166_VACCC|PROTEIN OPG166|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 HGLHDSDI 10
H L DSD+
Sbjct: 76 HSLSDSDV 83
>sp|PG166_MONPV|PROTEIN OPG166|Monkeypox virus (MPXV)
Query: 3 HGLHDSDI 10
H L DSD+
Sbjct: 76 HSLSDSDV 83
>sp|NEF_HV1VI|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 ARHGLHDSD 9
++HG+ D D
Sbjct: 169 SQHGMEDED 177
>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 RHGLHDSD 9
+HG+ D D
Sbjct: 171 QHGMEDED 178
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 RHGLHDSD 9
+HG+ D D
Sbjct: 171 QHGMEDED 178
>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12
Query: 2 RHGLHDSDI 10
+HG+ +SDI
Sbjct: 188 QHGVLESDI 196
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 RHGLHDSDI 10
R+G +D DI
Sbjct: 482 RNGTYDHDI 490
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 RHGLHDSDI 10
R+G +D DI
Sbjct: 482 RNGTYDHDI 490
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 2 RHGLHDSDI 10
R+G +D DI
Sbjct: 498 RNGTYDHDI 506
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 RHGLHDSDI 10
R+G +D DI
Sbjct: 482 RNGTYDHDI 490
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 2 RHGLHDSDI 10
R+G +D DI
Sbjct: 497 RNGTYDHDI 505
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 ARHGLHDS 8
AR+ LHD+
Sbjct: 458 ARYCLHDA 465
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 2 RHGLHDSD 9
+HGL D D
Sbjct: 377 QHGLSDPD 384
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 RHGLH 6
RHG H
Sbjct: 2919 RHGFH 2923
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 RHGLH 6
RHG H
Sbjct: 2949 RHGFH 2953
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 RHGLH 6
RHG H
Sbjct: 2919 RHGFH 2923
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 RHGLH 6
RHG H
Sbjct: 2949 RHGFH 2953
>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 HGLHDSD 9
HG+ D D
Sbjct: 172 HGMEDED 178
>sp|NEF_HV1M2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 HGLHDSD 9
HG+ D D
Sbjct: 166 HGMEDDD 172
>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RHGLHD 7
RHGL++
Sbjct: 147 RHGLYE 152
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RHGLHD 7
RHGL++
Sbjct: 147 RHGLYE 152
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 2 RHGLHDSD 9
+HG+ DS+
Sbjct: 354 QHGIDDSN 361
>sp|NEF_HV1MP|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 HGLHDSD 9
HG+ D D
Sbjct: 166 HGMEDED 172
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 482 RNGTYDHDV 490
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 482 RNGTYDHDV 490
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 499 RNGTYDHDV 507
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 2 RHGLHDSDI 10
R+G +D D+
Sbjct: 498 RNGTYDHDV 506
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 5 LHDSDI 10
+HDSD+
Sbjct: 187 VHDSDL 192
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 2 RHGLHDSD 9
+HG+ DS+
Sbjct: 340 QHGIDDSN 347
>sp|PG166_VARV|PROTEIN OPG166|Variola virus
Query: 3 HGLHDSDI 10
H L D+D+
Sbjct: 76 HSLSDNDV 83
>sp|PG166_VAR67|PROTEIN OPG166|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 HGLHDSDI 10
H L D+D+
Sbjct: 76 HSLSDNDV 83
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 2 RHGLHDS 8
RH +HD+
Sbjct: 387 RHVIHDA 393
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 2 RHGLHDS 8
RH +HD+
Sbjct: 387 RHVIHDA 393
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 2 RHGLHDSDI 10
+HG+ SD+
Sbjct: 381 QHGISPSDV 389
79|SequenceR|400|391|GGPAYARHGL
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 GPAYARH 8
GPAYA H
Sbjct: 268 GPAYATH 274
Query: 1 GGPAYARHG 9
G P RHG
Sbjct: 1607 GSPIIDRHG 1615
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 4 AYARHGL 10
+Y+RHGL
Sbjct: 376 SYSRHGL 382
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 PAYARHGL 10
PAY R+G+
Sbjct: 793 PAYLRYGI 800
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GPAYARH 8
PA+ARH
Sbjct: 787 APAWARH 793
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 2 GPAYARH 8
PA+ARH
Sbjct: 787 APAWARH 793
>sp|PG209_MONPV|PROTEIN OPG209|Monkeypox virus (MPXV)
Query: 1 GGPAYARHGL 10
G PAY R+G+
Sbjct: 179 GLPAYYRNGV 188
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 1 GGPAYARHG 9
GGP Y R G
Sbjct: 93 GGPIYKRVG 101
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 1 GGPAYARHG 9
GGP Y R G
Sbjct: 93 GGPIYKRVG 101
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 1 GGPAYARHG 9
GGP Y R G
Sbjct: 93 GGPIYKRVG 101
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 1 GGPAYARHG 9
GGP Y R G
Sbjct: 93 GGPIYKRVG 101
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 1 GGPAYARHG 9
GGP Y R G
Sbjct: 93 GGPIYKRVG 101
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 1 GGPAYARHG 9
GGP Y R G
Sbjct: 93 GGPIYKRVG 101
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 1 GGPAYARHG 9
GGP Y R G
Sbjct: 93 GGPIYKRVG 101
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 1 GGPAYARHG 9
GGP Y R G
Sbjct: 93 GGPIYKRVG 101
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 1 GGPAYARHG 9
GGP Y R G
Sbjct: 93 GGPIYKRVG 101
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 1 GGPAYARHG 9
GGP Y R G
Sbjct: 93 GGPIYKRVG 101
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 1 GGPAYARHG 9
GGP Y R G
Sbjct: 93 GGPIYKRVG 101
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 1 GGPAYARHG 9
GGP Y R G
Sbjct: 93 GGPIYKRVG 101
>sp|NCAP_RVFVZ|NUCLEOPROTEIN valley fever virus (strain
Query: 3 PAYARH 8
PAY RH
Sbjct: 138 PAYPRH 143
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 YARHGL 10
+ARHGL
Sbjct: 167 FARHGL 172
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 YARHGL 10
+ARHGL
Sbjct: 167 FARHGL 172
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 1 GGPAYARHG 9
GGP Y R G
Sbjct: 93 GGPIYRRVG 101
>sp|NCAP_RVFV|NUCLEOPROTEIN valley fever virus (RVFV)
Query: 3 PAYARH 8
PAY RH
Sbjct: 138 PAYPRH 143
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P
Query: 1 GGPAYARHG 9
G P YA+ G
Sbjct: 35 GAPVYAKGG 43
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 2 GPAYARH 8
GP YA H
Sbjct: 213 GPLYASH 219
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYKR 99
>sp|VP40_MABVM|MATRIX protein VP40|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 PAYARHG 9
P YA HG
Sbjct: 17 PPYADHG 23
>sp|VP40_MABVA|MATRIX protein VP40|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 PAYARHG 9
P YA HG
Sbjct: 17 PPYADHG 23
>sp|VP40_MABVP|MATRIX protein VP40|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 PAYARHG 9
P YA HG
Sbjct: 17 PPYADHG 23
>sp|VP40_MABVO|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 PAYARHG 9
P YA HG
Sbjct: 17 PPYADHG 23
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 GPAYARHGL 10
GP Y R G+
Sbjct: 774 GPDYKRPGV 782
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 2 GPAYARHGL 10
GP Y R G+
Sbjct: 772 GPDYKRPGV 780
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|VP40_MABVR|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 PAYARHG 9
P YA HG
Sbjct: 17 PPYADHG 23
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 GGPAYARHGL 10
GG RHG+
Sbjct: 964 GGKLLCRHGV 973
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 GGPAYARHGL 10
GG RHG+
Sbjct: 964 GGKLLCRHGV 973
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 1 GGPAYAR 7
GGP Y R
Sbjct: 93 GGPIYRR 99
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 4 AYARHG 9
AY +HG
Sbjct: 87 AYGKHG 92
>sp|VE8E2_HPV29|PROTEIN E8^E2C|Human papillomavirus 29
Query: 2 GPAYARH 8
GP YA H
Sbjct: 13 GPLYASH 19
80|SequenceR|405|396|PQYAPGGPAY
>sp|VU26_HHV7J|PROTEIN U26|Human herpesvirus 7 (strain JI)
Query: 1 PQYAPGGP 8
P Y P GP
Sbjct: 165 PIYKPNGP 172
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 PQYAPGGP 8
P PGGP
Sbjct: 267 PLRTPGGP 274
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 5 PGGPAY 10
P GPAY
Sbjct: 2232 PTGPAY 2237
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 PGGPAY 10
P GPAY
Sbjct: 2232 PTGPAY 2237
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 3 YAPGG 7
YAPGG
Sbjct: 244 YAPGG 248
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 143 ETAPGGP 149
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 143 ETAPGGP 149
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 143 ETAPGGP 149
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 133 ETAPGGP 139
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 5 PGGPA 9
PGGPA
Sbjct: 5 PGGPA 9
>sp|E312_ADE12|EARLY E3A 12.1 kDa protein|Human adenovirus A serotype 12
Query: 1 PQYAPGGPAY 10
P+ P GPA+
Sbjct: 36 PEEHPQGPAH 45
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 136 ETAPGGP 142
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 143 ERAPGGP 149
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 136 ETAPGGP 142
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 3 YAPGGPA 9
+APGGP+
Sbjct: 146 FAPGGPS 152
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 143 ERAPGGP 149
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 143 ERAPGGP 149
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 136 ETAPGGP 142
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 YAPGGPAY 10
Y PGG Y
Sbjct: 61 YGPGGQGY 68
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 YAPGGP 8
YAP GP
Sbjct: 2419 YAPQGP 2424
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 PQYAPGGP 8
P PGGP
Sbjct: 267 PLRLPGGP 274
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 YAPGGPA 9
Y PGG A
Sbjct: 244 YTPGGEA 250
>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933
Query: 3 YAPGGPA 9
Y PGG A
Sbjct: 244 YTPGGEA 250
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 3 YAPGGPA 9
+APGGP+
Sbjct: 146 FAPGGPS 152
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 PQYAPGGPAY 10
P YAP G +
Sbjct: 253 PVYAPAGEDF 262
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 136 ETAPGGP 142
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 136 ERAPGGP 142
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 PQYAPGGPAY 10
P YAP G +
Sbjct: 253 PVYAPAGEDF 262
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 PQYAPGGPAY 10
P YAP G +
Sbjct: 253 PVYAPAGEDF 262
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 YAPGGP 8
YAP GP
Sbjct: 2419 YAPQGP 2424
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 PQYAPGGPAY 10
P YAP G +
Sbjct: 253 PVYAPAGEDF 262
>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)
Query: 2 QYAPGGP 8
++APGGP
Sbjct: 128 EWAPGGP 134
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 YAPGGPAY 10
+ PGGP Y
Sbjct: 265 FHPGGPIY 272
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 4 APGGPA 9
APG PA
Sbjct: 46 APGAPA 51
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 QYAPGGPA 9
+Y P GP+
Sbjct: 692 EYPPEGPS 699
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 PQYAPG 6
P+Y PG
Sbjct: 698 PRYIPG 703
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PQYAPG 6
P+Y PG
Sbjct: 698 PRYIPG 703
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 4 APGGPA 9
APG PA
Sbjct: 64 APGAPA 69
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 4 APGGPA 9
APG PA
Sbjct: 64 APGAPA 69
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 QYAPGGPA 9
+Y P GP+
Sbjct: 692 EYPPEGPS 699
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 5 PGGPA 9
PGGP+
Sbjct: 1167 PGGPS 1171
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 5 PGGPA 9
PGGP+
Sbjct: 1167 PGGPS 1171
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 5 PGGPA 9
PGGP+
Sbjct: 1167 PGGPS 1171
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 QYAPGGPA 9
+Y P GP+
Sbjct: 693 EYPPEGPS 700
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 1 PQYAPGGPAY 10
P++ GG Y
Sbjct: 522 PEFTTGGTNY 531
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 PQYAPGGPAY 10
P++ GG Y
Sbjct: 525 PEFTTGGTNY 534
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 QYAPGGPA 9
+Y P GP+
Sbjct: 693 EYPPEGPS 700
>sp|NCAP_SFTSV|NUCLEOPROTEIN phlebovirus (isolate SFTSV/Human/China/HB29/2010) (Severe
Query: 2 QYAPGGPA 9
+Y P GPA
Sbjct: 124 EYLPVGPA 131
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 PQYAPGGPAY 10
P AP P Y
Sbjct: 602 PTVAPPAPVY 611
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 PQYAPGGPAY 10
P AP P Y
Sbjct: 602 PTVAPPAPVY 611
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 PQYAPGGPAY 10
P AP P Y
Sbjct: 602 PTVAPPAPVY 611
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 PQYAPGGPAY 10
P AP P Y
Sbjct: 602 PTVAPPAPVY 611
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 140 ETAPGGP 146
>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 143 ETAPGGP 149
>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 143 EKAPGGP 149
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 1 PQYAPGGPAY 10
P +PG P Y
Sbjct: 587 PFASPGEPLY 596
>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 143 ETAPGGP 149
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 143 ERAPGGP 149
>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 143 ERAPGGP 149
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 143 ERAPGGP 149
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 143 ERAPGGP 149
>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 143 ERAPGGP 149
>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 143 ERAPGGP 149
>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 139 ETAPGGP 145
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 1 PQYAPGGPAY 10
P AP P Y
Sbjct: 602 PTVAPPAPVY 611
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 2 QYAPGGP 8
+ APGGP
Sbjct: 139 ETAPGGP 145
81|SequenceR|410|401|FAEVVPQYAP
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 1 FAEVVPQY 8
AEV PQY
Sbjct: 322 LAEVHPQY 329
>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain
Query: 2 AEVVPQYA 9
+++VP+YA
Sbjct: 370 SDIVPRYA 377
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 4 VVPQYA 9
VVP+YA
Sbjct: 266 VVPRYA 271
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 4 VVPQYA 9
VVP+YA
Sbjct: 266 VVPRYA 271
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 4 VVPQYA 9
VVP+YA
Sbjct: 266 VVPRYA 271
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 4 VVPQYA 9
VVP+YA
Sbjct: 266 VVPRYA 271
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 AEVVPQ 7
AEV+PQ
Sbjct: 1256 AEVIPQ 1261
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 FAEVVPQYA 9
F ++P YA
Sbjct: 660 FVALIPDYA 668
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 FAEVVPQYA 9
F ++P YA
Sbjct: 660 FVALIPDYA 668
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 FAEVVPQYA 9
F ++P YA
Sbjct: 660 FVALIPDYA 668
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 FAEVVPQYA 9
F ++P YA
Sbjct: 660 FVALIPDYA 668
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 FAEVVPQYA 9
F ++P YA
Sbjct: 660 FVALIPDYA 668
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 AEVVPQ 7
AEV+PQ
Sbjct: 1254 AEVIPQ 1259
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 AEVVPQ 7
AEV+PQ
Sbjct: 1257 AEVIPQ 1262
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 FAEVVPQYA 9
F ++P YA
Sbjct: 660 FVALIPDYA 668
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 AEVVPQ 7
AEV+PQ
Sbjct: 1255 AEVIPQ 1260
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 AEVVPQ 7
AEV+PQ
Sbjct: 1256 AEVIPQ 1261
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 AEVVPQ 7
AEV+PQ
Sbjct: 1255 AEVIPQ 1260
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 AEVVPQ 7
AEV+PQ
Sbjct: 1257 AEVIPQ 1262
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 AEVVPQ 7
AEV+PQ
Sbjct: 1255 AEVIPQ 1260
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 AEVVPQ 7
AEV+PQ
Sbjct: 1256 AEVIPQ 1261
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 AEVVPQ 7
AEV+PQ
Sbjct: 1255 AEVIPQ 1260
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 AEVVPQ 7
AEV+PQ
Sbjct: 1256 AEVIPQ 1261
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 AEVVPQ 7
AEV+PQ
Sbjct: 1254 AEVIPQ 1259
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 FAEVVPQY 8
FAE +P++
Sbjct: 150 FAEKIPRF 157
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 1 FAEVVPQYA 9
FAE++ YA
Sbjct: 481 FAEIMLNYA 489
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FAEVVPQYAP 10
F EV +Y P
Sbjct: 210 FTEVTIEYLP 219
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FAEVVPQYAP 10
F EV +Y P
Sbjct: 210 FTEVTIEYLP 219
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FAEVVPQYAP 10
F EV +Y P
Sbjct: 210 FTEVTIEYLP 219
82|SequenceR|415|406|LIDTGFAEVV
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LIDTGFAE 8
L+D GFAE
Sbjct: 306 LLDRGFAE 313
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 1 LIDTGFAEVV 10
LID GF + V
Sbjct: 729 LIDVGFGQKV 738
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 LIDTGFAEVV 10
LID GF + V
Sbjct: 729 LIDVGFGQKV 738
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 LIDTGFAEVV 10
LID GF + V
Sbjct: 729 LIDVGFGQKV 738
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 1 LIDTGFAEVV 10
LID GF + V
Sbjct: 729 LIDVGFGQKV 738
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 1 LIDTGFAEV 9
LID+GF V
Sbjct: 308 LIDSGFKTV 316
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 LIDTGFAEV 9
LID+GF V
Sbjct: 311 LIDSGFKTV 319
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 1 LIDTGFA 7
+IDTGF
Sbjct: 200 MIDTGFG 206
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 1 LIDTGFA 7
+IDTGF
Sbjct: 230 MIDTGFG 236
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 1 LIDTGFA 7
+IDTGF
Sbjct: 234 MIDTGFG 240
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 1 LIDTGFA 7
+IDTGF
Sbjct: 199 MIDTGFG 205
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 1 LIDTGFA 7
+IDTGF
Sbjct: 199 MIDTGFG 205
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 5 GFAEVV 10
GFAEVV
Sbjct: 251 GFAEVV 256
>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)
Query: 2 IDTGFA 7
+DTGFA
Sbjct: 204 MDTGFA 209
>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)
Query: 2 IDTGFA 7
+DTGFA
Sbjct: 204 MDTGFA 209
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 199 MVDTGFG 205
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 196 MVDTGFG 202
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 196 MVDTGFG 202
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 199 MVDTGFG 205
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 226 MVDTGFG 232
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 197 MVDTGFG 203
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 198 MVDTGFG 204
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 229 MVDTGFG 235
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 197 MVDTGFG 203
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 226 MVDTGFG 232
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 198 MVDTGFG 204
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 200 MVDTGFG 206
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 200 MVDTGFG 206
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 201 MVDTGFG 207
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 199 MVDTGFG 205
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 200 MVDTGFG 206
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 197 MVDTGFG 203
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 1 LIDTGFA 7
++DTGF
Sbjct: 197 MVDTGFG 203
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 LIDTGF 6
LID+GF
Sbjct: 254 LIDSGF 259
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 1 LIDTGFAEV 9
LID F EV
Sbjct: 407 LIDNEFTEV 415
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 1 LIDTGFAEV 9
LID F EV
Sbjct: 407 LIDNEFTEV 415
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 1 LIDTGFAEV 9
LID F EV
Sbjct: 407 LIDNEFTEV 415
>sp|HBEAG_HBVC1|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 LIDTGFA 7
L+DT FA
Sbjct: 59 LLDTAFA 65
>sp|CAPSD_HBVC1|CAPSID protein|Hepatitis B virus genotype C
Query: 1 LIDTGFA 7
L+DT FA
Sbjct: 30 LLDTAFA 36
83|SequenceR|420|411|IGDKHLIDTG
>sp|PAP1_YMTV5|POLY(A) polymerase catalytic subunit|Yaba monkey tumor virus (strain
Query: 3 DKHLIDT 9
DKH+ID+
Sbjct: 238 DKHIIDS 244
>sp|PAP1_YLDV|POLY(A) polymerase catalytic subunit|Yaba-like disease virus (YLDV)
Query: 3 DKHLIDT 9
DKH+ID+
Sbjct: 238 DKHIIDS 244
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 GDKHLID 8
GD HLID
Sbjct: 1384 GDFHLID 1390
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 GDKHLID 8
GD HLID
Sbjct: 1456 GDFHLID 1462
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 GDKHLID 8
GD HLID
Sbjct: 1456 GDFHLID 1462
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 GDKHLID 8
GD HLID
Sbjct: 1456 GDFHLID 1462
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 GDKHLID 8
GD HLID
Sbjct: 1456 GDFHLID 1462
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 2 GDKHLID 8
GDK LID
Sbjct: 722 GDKDLID 728
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GDKHLIDTG 10
GDK L +TG
Sbjct: 474 GDKTLSETG 482
>sp|DUT_ORFN2|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Orf virus (strain NZ2) (OV
Query: 4 KHLIDTG 10
KH ID G
Sbjct: 74 KHFIDVG 80
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 5 HLIDT 9
HLIDT
Sbjct: 2025 HLIDT 2029
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 4 KHLIDTG 10
KH ID G
Sbjct: 286 KHAIDAG 292
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 DKHLIDTG 10
+KH DTG
Sbjct: 606 EKHPADTG 613
>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)
Query: 3 DKHLIDT 9
D H+ID+
Sbjct: 248 DNHIIDS 254
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 3 DKHLID 8
D+HL+D
Sbjct: 408 DEHLLD 413
>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)
Query: 3 DKHLIDT 9
D H+ID+
Sbjct: 248 DNHIIDS 254
>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 3 DKHLIDT 9
D H+ID+
Sbjct: 248 DNHIIDS 254
>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 3 DKHLIDT 9
D H+ID+
Sbjct: 248 DNHIIDS 254
>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 3 DKHLIDT 9
D H+ID+
Sbjct: 248 DNHIIDS 254
>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)
Query: 3 DKHLIDT 9
D H+ID+
Sbjct: 248 DNHIIDS 254
>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 3 DKHLIDT 9
D H+ID+
Sbjct: 248 DNHIIDS 254
>sp|PAP1_VARV|POLY(A) polymerase catalytic subunit|Variola virus
Query: 3 DKHLIDT 9
D H+ID+
Sbjct: 248 DNHIIDS 254
>sp|PAP1_VAR67|POLY(A) polymerase catalytic subunit|Variola virus (isolate
Query: 3 DKHLIDT 9
D H+ID+
Sbjct: 248 DNHIIDS 254
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 GDKHLIDT 9
G KH +DT
Sbjct: 774 GVKHSVDT 781
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 DKHLIDT 9
DK+LI+T
Sbjct: 625 DKNLIET 631
84|SequenceR|425|416|VKRNIIGDKH
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 KRNIIGD 8
+RNIIGD
Sbjct: 320 RRNIIGD 326
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 VKRNIIGD 8
+KR +IGD
Sbjct: 575 IKRRLIGD 582
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 RNIIGDK 9
RN+IGD+
Sbjct: 3394 RNLIGDE 3400
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 VKRNIIGDKH 10
V NI+GD H
Sbjct: 459 VNINIVGDFH 468
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VKRNIIGDKH 10
V NI+GD H
Sbjct: 459 VNINIVGDFH 468
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 KRNIIGDK 9
KRN++ DK
Sbjct: 1122 KRNVLIDK 1129
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 KRNIIGDK 9
KRN++ DK
Sbjct: 1122 KRNVLIDK 1129
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 KRNIIGDK 9
KRN++ DK
Sbjct: 1122 KRNVLIDK 1129
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 1 VKRNIIG 7
VK+N++G
Sbjct: 16 VKKNVLG 22
85|SequenceR|430|421|VRSGLVKRNI
>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)
Query: 2 RSGLVKRNI 10
+SG VKR I
Sbjct: 340 KSGTVKRKI 348
>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 2 RSGLVKRNI 10
+SG VKR I
Sbjct: 340 KSGTVKRKI 348
>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 2 RSGLVKRNI 10
+SG VKR I
Sbjct: 340 KSGTVKRKI 348
>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus
Query: 2 RSGLVKRNI 10
+SG VKR I
Sbjct: 340 KSGTVKRKI 348
>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate
Query: 2 RSGLVKRNI 10
+SG VKR I
Sbjct: 340 KSGTVKRKI 348
86|SequenceR|435|426|KKNGFVRSGL
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 KKNGFVRSG 9
K++GF R+G
Sbjct: 1215 KQHGFKRTG 1223
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 KKNGFVRSG 9
K++GF R+G
Sbjct: 1215 KQHGFKRTG 1223
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 KKNGFVR 7
+KNGFV+
Sbjct: 501 EKNGFVQ 507
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 KNGFVRSG 9
++GF RSG
Sbjct: 536 QDGFQRSG 543
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 KNGFVRSG 9
++GF RSG
Sbjct: 536 QDGFQRSG 543
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 KNGFVRSG 9
++GF RSG
Sbjct: 568 QDGFQRSG 575
>sp|UL08_HCMVA|MEMBRANE protein UL8|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GFVRSG 9
GF RSG
Sbjct: 118 GFTRSG 123
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 4 GFVRSGL 10
GFV SGL
Sbjct: 1832 GFVVSGL 1838
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 GFVRSGL 10
GFV SGL
Sbjct: 1832 GFVVSGL 1838
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 GFVRSGL 10
GFV SGL
Sbjct: 1832 GFVVSGL 1838
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 GFVRSGL 10
GFV SGL
Sbjct: 1832 GFVVSGL 1838
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 GFVRSGL 10
GFV SGL
Sbjct: 1832 GFVVSGL 1838
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 GFVRSGL 10
GFV SGL
Sbjct: 1832 GFVVSGL 1838
>sp|UL07_HCMVA|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GFVRSG 9
GF RSG
Sbjct: 118 GFTRSG 123
>sp|UL07_HCMVM|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GFVRSG 9
GF RSG
Sbjct: 118 GFTRSG 123
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 KKNGFVRS 8
K NGFV +
Sbjct: 685 KSNGFVNN 692
87|SequenceR|440|431|LIKLQKKNGF
>sp|PG055_VARV|PROTEIN OPG055|Variola virus
Query: 1 LIKLQKKNGF 10
L+KL+ ++GF
Sbjct: 122 LVKLKHRDGF 131
>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LIKLQKKNGF 10
L+KL+ ++GF
Sbjct: 122 LVKLKHRDGF 131
>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LIKLQKKNGF 10
L+KL+ ++GF
Sbjct: 122 LVKLKHRDGF 131
>sp|PG055_VACCP|PROTEIN OPG055|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 LIKLQKKNGF 10
L+KL+ ++GF
Sbjct: 119 LVKLKHRDGF 128
>sp|Y190_ADE07|UNCHARACTERIZED 19.0 kDa early protein|Human adenovirus B serotype 7
Query: 2 IKLQKKNGF 10
+ +QKK GF
Sbjct: 118 LTVQKKTGF 126
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LIKLQKKNG 9
L KLQ+K+G
Sbjct: 2681 LEKLQRKHG 2689
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LIKLQKKNG 9
L KLQ+K+G
Sbjct: 2681 LEKLQRKHG 2689
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LIKLQKKNG 9
L KLQ+K+G
Sbjct: 2681 LEKLQRKHG 2689
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LIKLQKKNG 9
L KLQ+K+G
Sbjct: 2681 LEKLQRKHG 2689
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LIKLQKKNG 9
L KLQ+K+G
Sbjct: 2681 LEKLQRKHG 2689
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 LIKLQKKNG 9
+IKL++K G
Sbjct: 965 IIKLKEKTG 973
>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)
Query: 1 LIKLQKKNGF 10
L+KL+ +GF
Sbjct: 122 LVKLKHSDGF 131
88|SequenceR|445|436|WMIDTLIKLQ
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 WMIDTLIKL 9
WMID+L L
Sbjct: 1029 WMIDSLKSL 1037
>sp|SPI2_MONPV|SERINE proteinase inhibitor 2|Monkeypox virus (MPXV)
Query: 2 MIDTLIKL 9
++DTLIKL
Sbjct: 249 LVDTLIKL 256
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 312 WMTDTLL 318
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 318 WMTDTLL 324
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 316 WMTDTLL 322
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 315 WMTDTLL 321
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 312 WMTDTLL 318
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 312 WMTDTLL 318
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 314 WMTDTLL 320
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 316 WMTDTLL 322
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 316 WMTDTLL 322
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 314 WMTDTLL 320
>sp|SPI2_VARV|SERINE proteinase inhibitor 2|Variola virus
Query: 2 MIDTLIKL 9
++DTL+KL
Sbjct: 249 LVDTLVKL 256
>sp|SPI2_VAR67|SERINE proteinase inhibitor 2|Variola virus (isolate
Query: 2 MIDTLIKL 9
++DTL+KL
Sbjct: 249 LVDTLVKL 256
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 WMIDTL 6
W++DTL
Sbjct: 294 WLVDTL 299
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 WMIDTLIKLQ 10
W I TL+K++
Sbjct: 1062 WWIQTLLKIK 1071
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 318 WMTDTLL 324
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 316 WMTDTLL 322
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 314 WMTDTLL 320
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 315 WMTDTLL 321
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 316 WMTDTLL 322
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 312 WMTDTLL 318
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 316 WMTDTLL 322
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 WMIDTLIKLQ 10
W I TL+K++
Sbjct: 1063 WWIHTLLKIK 1072
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 WMIDTLIKLQ 10
W I TL+K++
Sbjct: 1071 WWIHTLLKIK 1080
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 312 WMTDTLL 318
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 312 WMTDTLL 318
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM DTL+
Sbjct: 314 WMTDTLL 320
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 WMIDTLIKLQ 10
W +D IKL+
Sbjct: 451 WSLDNPIKLK 460
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 WMIDTL 6
W++DT+
Sbjct: 291 WLVDTI 296
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 WMIDTLIKL 9
W IDT +L
Sbjct: 2758 WFIDTFNQL 2766
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 317 WMTETLL 323
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 318 WMTETLL 324
>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 318 WMTETLL 324
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 312 WMTETLL 318
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 313 WMTETLL 319
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 312 WMTETLL 318
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 319 WMTETLL 325
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 318 WMTETLL 324
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 322 WMTETLL 328
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 315 WMTETLL 321
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 315 WMTETLL 321
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 WMIDTLIKL 9
W IDT +L
Sbjct: 2758 WFIDTFNQL 2766
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 312 WMTETLL 318
>sp|VPR_HV2D1|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 1 WMIDTLIKLQ 10
W+I+TL +++
Sbjct: 23 WVIETLKEIK 32
>sp|SPI2B_VACCC|PUTATIVE serine proteinase inhibitor 2|Vaccinia virus (strain Copenhagen)
Query: 2 MIDTLIK 8
++DTL+K
Sbjct: 126 LVDTLVK 132
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
>sp|VPR_HV2ST|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 1 WMIDTLIKLQ 10
W+I+TL +++
Sbjct: 23 WVIETLREIK 32
>sp|VPR_HV2BE|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 1 WMIDTLIKLQ 10
W+I+TL +++
Sbjct: 23 WVIETLREIK 32
>sp|PG191_MONPV|PROTEIN OPG191|Monkeypox virus (MPXV)
Query: 1 WMIDTL 6
W++DTL
Sbjct: 67 WVMDTL 72
>sp|PG191_VACCC|PROTEIN OPG191|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 WMIDTL 6
W++DTL
Sbjct: 67 WVMDTL 72
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 WMIDTL 6
W++DT+
Sbjct: 345 WLLDTV 350
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 318 WMTETLL 324
>sp|SPI2_CWPXB|SERINE proteinase inhibitor 2|Cowpox virus (strain Brighton Red)
Query: 2 MIDTLIKL 9
++D L+KL
Sbjct: 246 LVDALVKL 253
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 315 WMTETLL 321
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 318 WMTETLL 324
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 312 WMTETLL 318
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WMIDTLI 7
WM +TL+
Sbjct: 316 WMTETLL 322
89|SequenceR|450|441|KAIIPWMIDT
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 KAIIPWMIDT 10
KAI+ W+ DT
Sbjct: 1551 KAIVRWLRDT 1560
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 2 AIIPWMID 9
A+I W+ID
Sbjct: 423 ALIEWLID 430
>sp|NSP5_ROTHC|NON-STRUCTURAL protein 5|Rotavirus C (isolate RVC/Human/United
Query: 3 IIPWMIDT 10
I+ WM+D+
Sbjct: 102 IMKWMLDS 109
>sp|YVD2_VACCC|UNCHARACTERIZED 8.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 IIPWMID 9
II WM+D
Sbjct: 56 IIDWMVD 62
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 KAIIPWMI 8
K I+PW++
Sbjct: 183 KFIVPWVM 190
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 KAIIPWMI 8
K I+PW++
Sbjct: 183 KFIVPWVM 190
>sp|VE7_HPV04|PROTEIN E7|Human papillomavirus 4
Query: 1 KAIIPWMIDT 10
++++P+ IDT
Sbjct: 43 ESVVPFRIDT 52
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 5 PWMID 9
PW+ID
Sbjct: 1683 PWIID 1687
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 5 PWMID 9
PW+ID
Sbjct: 1683 PWIID 1687
>sp|UNG_HHV6Z|URACIL-DNA glycosylase|Human herpesvirus 6B (strain Z29)
Query: 2 AIIPWMID 9
A++ WM+D
Sbjct: 2 ALLQWMLD 9
>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 AIIPWMID 9
A++ WM+D
Sbjct: 2 ALLQWMLD 9
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 3 IIPWM 7
++PWM
Sbjct: 312 MVPWM 316
>sp|PG161_VACCC|PROTEIN OPG161|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 IIPWMID 9
+I W+ID
Sbjct: 140 LITWLID 146
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 6 WMIDT 10
WMID+
Sbjct: 1029 WMIDS 1033
>sp|NSP3_ROTHK|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 6 WMIDT 10
WMID+
Sbjct: 87 WMIDS 91
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 IIPWM 7
++PWM
Sbjct: 258 VLPWM 262
>sp|MC132_MCV1|PROTEIN MC132|Molluscum contagiosum virus subtype 1
Query: 3 IIPWMID 9
I+ WM+D
Sbjct: 86 IVRWMLD 92
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 AIIPWMID 9
+++ W+ID
Sbjct: 427 SLVEWLID 434
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 3 IIPWMI 8
I+PW +
Sbjct: 505 ILPWQV 510
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 6 WMIDT 10
W++DT
Sbjct: 110 WLVDT 114
90|SequenceR|455|446|EERALKAIIP
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 3 RALKAII 9
RALKAII
Sbjct: 75 RALKAII 81
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 3 RALKAII 9
RALKAII
Sbjct: 75 RALKAII 81
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 103 EKRRLKLIMP 112
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 103 EKRRLKLIMP 112
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 103 EKRRLKLIMP 112
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 103 EKRRLKLIMP 112
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 103 EKRRLKLIMP 112
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 103 EKRRLKLIMP 112
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 103 EKRRLKLIMP 112
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 103 EKRRLKLIMP 112
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 103 EKRRLKLIMP 112
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 103 EKRRLKLIMP 112
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 103 EKRRLKLIMP 112
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 105 EKRRLKLIMP 114
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 105 EKRRLKLIMP 114
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 105 EKRRLKLIMP 114
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 105 EKRRLKLIMP 114
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 105 EKRRLKLIMP 114
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 105 EKRRLKLIMP 114
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 105 EKRRLKLIMP 114
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 103 EKRRLKLIMP 112
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 EERALKAIIP 10
E+R LK I+P
Sbjct: 105 EKRRLKLIMP 114
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 1 EERALKAIIP 10
E+R LK ++P
Sbjct: 103 EKRRLKLVMP 112
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 1 EERALKAIIP 10
E+R LK ++P
Sbjct: 103 EKRRLKLVMP 112
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 1 EERALKAIIP 10
E+R LK ++P
Sbjct: 103 EKRRLKLVMP 112
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 1 EERALKAIIP 10
+ERA I+P
Sbjct: 468 DERATNPIVP 477
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 1 EERALKAIIP 10
+ERA I+P
Sbjct: 468 DERATNPIVP 477
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 1 EERALKAIIP 10
+ERA I+P
Sbjct: 468 DERATNPIVP 477
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 EERALKAIIP 10
+ERA I+P
Sbjct: 468 DERATNPIVP 477
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 1 EERALKAIIP 10
+ERA I+P
Sbjct: 468 DERAANPIVP 477
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 1 EERALKAIIP 10
+ERA I+P
Sbjct: 468 DERAANPIVP 477
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 1 EERALKAIIP 10
+ERA I+P
Sbjct: 468 DERAANPIVP 477
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 EERALKAIIP 10
+ERA I+P
Sbjct: 468 DERAANPIVP 477
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 EERALKAIIP 10
++RA+ A+IP
Sbjct: 45 QKRAIVAVIP 54
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 EERALKAIIP 10
++RA+ A+IP
Sbjct: 45 QKRAIVAVIP 54
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 1 EERALKAIIP 10
+ERA I+P
Sbjct: 468 DERAANPIVP 477
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 1 EERALKAIIP 10
+ERA I+P
Sbjct: 468 DERAANPIVP 477
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 EERALKAIIP 10
+ERA I+P
Sbjct: 468 DERAANPIVP 477
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 1 EERALKAIIP 10
+ERA I+P
Sbjct: 468 DERAANPIVP 477
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 EERALKAIIP 10
++RA+ A+IP
Sbjct: 45 QKRAIVAVIP 54
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 EERALKAIIP 10
++RA+ A+IP
Sbjct: 45 QKRAIVAVIP 54
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 EERALKAIIP 10
++RA+ A+IP
Sbjct: 45 QKRAIVAVIP 54
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 EERALKAIIP 10
++RA+ A+IP
Sbjct: 45 QKRAIVAVIP 54
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 EERALKAIIP 10
++RA+ A+IP
Sbjct: 45 QKRAIVAVIP 54
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 EERALKAIIP 10
++RA+ A+IP
Sbjct: 45 QKRAIVAVIP 54
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 EERALKAIIP 10
++RA+ A+IP
Sbjct: 45 QKRAIVAVIP 54
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 2 ERALKAIIP 10
++ +KAI+P
Sbjct: 273 DKYIKAIVP 281
91|SequenceR|460|451|VARDMEERAL
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 2 ARDMEER 8
ARD++ER
Sbjct: 599 ARDLKER 605
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 2 ARDMEER 8
ARD++ER
Sbjct: 599 ARDLKER 605
>sp|PG043_MONPV|MONOGLYCERIDE lipase homolog|Monkeypox virus (MPXV)
Query: 1 VARDMEE 7
V+RDM+E
Sbjct: 166 VSRDMDE 172
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VARDMEE 7
+ARD+EE
Sbjct: 1098 LARDLEE 1104
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VARDMEE 7
+ARD+EE
Sbjct: 1098 LARDLEE 1104
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 3 RDMEERAL 10
RD++ RAL
Sbjct: 334 RDLDTRAL 341
>sp|PG035_VACCC|PROTEIN OPG035|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VARDMEERA 9
VARD+ ER+
Sbjct: 79 VARDIGERS 87
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 RDMEERAL 10
RD++ RAL
Sbjct: 334 RDLDTRAL 341
92|SequenceR|465|456|RKGEAVARDM
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 3 GEAVARD 9
G+AVARD
Sbjct: 364 GQAVARD 370
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 RKGEAVARD 9
R GEA AR+
Sbjct: 1347 RNGEAHARE 1355
>sp|M1_INBAC|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 1 RKGEAVARDM 10
+ GE +A+D+
Sbjct: 220 KNGEGIAKDV 229
>sp|M1_INBYA|MATRIX protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 1 RKGEAVARDM 10
+ GE +A+D+
Sbjct: 220 KNGEGIAKDV 229
>sp|M1_INBMP|MATRIX protein 1|Influenza B virus (strain B/Memphis/12/1997)
Query: 1 RKGEAVARDM 10
+ GE +A+D+
Sbjct: 220 KNGEGIAKDV 229
>sp|M1_INBAD|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 1 RKGEAVARDM 10
+ GE +A+D+
Sbjct: 220 KNGEGIAKDV 229
>sp|M1_INBLE|MATRIX protein 1|Influenza B virus (strain B/Lee/1940)
Query: 1 RKGEAVARDM 10
+ GE +A+D+
Sbjct: 220 KNGEGIAKDV 229
>sp|M1_INBSI|MATRIX protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 RKGEAVARDM 10
+ GE +A+D+
Sbjct: 220 KNGEGIAKDV 229
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 RKGEAVARD 9
R GEA AR+
Sbjct: 1347 RDGEAHARE 1355
93|SequenceR|470|461|DIVCVRKGEA
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 1 DIVCVR 6
DI+CVR
Sbjct: 532 DIICVR 537
>sp|SPIKE_ADE1H|FIBER protein|Human adenovirus D serotype 15/H9
Query: 3 VCVRKGEA 10
VCVR GE
Sbjct: 152 VCVRVGEG 159
>sp|SPIKE_ADE09|FIBER protein|Human adenovirus D serotype 9
Query: 3 VCVRKGEA 10
VCVR GE
Sbjct: 152 VCVRVGEG 159
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 CVRKGEA 10
CV+KG+A
Sbjct: 674 CVKKGDA 680
>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8
Query: 3 VCVRKGEA 10
+CVR GE
Sbjct: 152 ICVRVGEG 159
>sp|F_HCV77|F protein|Hepatitis C virus genotype 1a
Query: 1 DIVCVRKG 8
D VC R+G
Sbjct: 44 DWVCARRG 51
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 2 IVCVRKGEA 10
+ CVR+G A
Sbjct: 111 VPCVREGNA 119
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 IVCVRKGEA 10
+ CVR+G A
Sbjct: 227 VPCVREGNA 235
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 2 IVCVRKGEA 10
+ CVR+G A
Sbjct: 99 VPCVREGNA 107
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 2 IVCVRKGEA 10
+ CVR+G A
Sbjct: 227 VPCVREGNA 235
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 IVCVRKGEA 10
+ CVR+G A
Sbjct: 227 VPCVREGNA 235
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 IVCVRKGEA 10
+ CVR+G A
Sbjct: 227 VPCVREGNA 235
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DIVCVR 6
D++CVR
Sbjct: 125 DLICVR 130
>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)
Query: 1 DIVCVR 6
D++C+R
Sbjct: 125 DLICIR 130
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 4 CVRKGE 9
C+ KGE
Sbjct: 1047 CIEKGE 1052
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DIVCVRKGEA 10
++ C+R+G A
Sbjct: 293 NMTCIREGIA 302
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 IVCVRKGEA 10
+ CVR+G +
Sbjct: 227 VPCVREGNS 235
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 IVCVRKGEA 10
+ CVR+G +
Sbjct: 227 VPCVREGNS 235
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 IVCVRKGEA 10
+ CVR+G +
Sbjct: 227 VPCVREGNS 235
>sp|RP30_VAR67|DNA-DIRECTED RNA polymerase 30 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 IVCVRKG 8
I C++KG
Sbjct: 125 IKCIKKG 131
>sp|RP30_VACCC|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 IVCVRKG 8
I C++KG
Sbjct: 125 IKCIKKG 131
>sp|RP30_VACCA|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 IVCVRKG 8
I C++KG
Sbjct: 125 IKCIKKG 131
>sp|RP30_MONPV|DNA-DIRECTED RNA polymerase 30 kDa|Monkeypox virus (MPXV)
Query: 2 IVCVRKG 8
I C++KG
Sbjct: 125 IKCIKKG 131
94|SequenceR|475|466|LLVAADIVCV
>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LLVAADIVC 9
LL+++DI C
Sbjct: 123 LLISSDISC 131
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 LVAADIVC 9
L+AAD+ C
Sbjct: 1272 LIAADLPC 1279
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 LVAADIVC 9
L+AAD+ C
Sbjct: 1222 LIAADLPC 1229
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 LVAADIVC 9
L+AAD+ C
Sbjct: 1242 LIAADLPC 1249
95|SequenceR|480|471|QWGAELLVAA
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 423 YNAELLVA 430
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 433 YNAELLVA 440
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 423 YNAELLVA 430
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 440 YNAELLVA 447
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 439 YNAELLVA 446
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 2 WGAELLVA 9
+ AELLVA
Sbjct: 436 YNAELLVA 443
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 WGAELL 7
WG EL+
Sbjct: 449 WGIELI 454
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 2 WGAELL 7
WG EL+
Sbjct: 441 WGIELI 446
96|SequenceR|485|476|EHVLNQWGAE
>sp|VE4_HPV04|PROTEIN E4|Human papillomavirus 4
Query: 2 HVLNQWGAE 10
H+L +WGA+
Sbjct: 96 HLLQKWGAD 104
>sp|Y190_ADE07|UNCHARACTERIZED 19.0 kDa early protein|Human adenovirus B serotype 7
Query: 1 EHVLNQW 7
+H L+QW
Sbjct: 94 KHTLSQW 100
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 HVLNQW 7
VLNQW
Sbjct: 628 QVLNQW 633
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 1 EHVLNQW 7
+HVL+ W
Sbjct: 68 DHVLSDW 74
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 VLNQW 7
+LNQW
Sbjct: 2229 ILNQW 2233
Query: 4 LNQWGAE 10
L+ WG+E
Sbjct: 505 LHSWGSE 511
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 EHVLNQWGAE 10
EH+L W ++
Sbjct: 2634 EHLLKMWTSK 2643
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 EHVLNQW 7
EH+ N W
Sbjct: 2113 EHIYNFW 2119
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 NQWGAE 10
N WG+E
Sbjct: 404 NYWGSE 409
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 NQWGAE 10
N WG+E
Sbjct: 404 NYWGSE 409
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 NQWGAE 10
N WG+E
Sbjct: 404 NYWGSE 409
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 NQWGAE 10
N WG+E
Sbjct: 404 NYWGSE 409
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 NQWGAE 10
N WG+E
Sbjct: 404 NYWGSE 409
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 NQWGAE 10
N WG+E
Sbjct: 404 NYWGSE 409
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 NQWGAE 10
N WG+E
Sbjct: 404 NYWGSE 409
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 EHVLNQWG 8
+ +LNQ+G
Sbjct: 243 QFILNQYG 250
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 EHVLNQWG 8
+ +LNQ+G
Sbjct: 243 QFILNQYG 250
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 EHVLNQWG 8
+ +LNQ+G
Sbjct: 243 QFILNQYG 250
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 EHVLNQWG 8
+H++ QW
Sbjct: 432 QHLIPQWA 439
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EHVLNQWG 8
+H++ QW
Sbjct: 432 QHLIPQWA 439
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EHVLNQWG 8
+H++ QW
Sbjct: 433 QHLIPQWA 440
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 EHVLNQ 6
EH+LN+
Sbjct: 943 EHILNR 948
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 HVLNQWGAE 10
HV ++W A+
Sbjct: 1083 HVTHRWPAD 1091
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 HVLNQW 7
H+L +W
Sbjct: 1324 HILEKW 1329
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 HVLNQW 7
H+L +W
Sbjct: 1324 HILEKW 1329
97|SequenceR|490|481|VATWVEHVLN
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 VATWVEHVLN 10
+ W+EH+LN
Sbjct: 1948 IIDWLEHILN 1957
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 VATWVEHVLN 10
+ W++HVLN
Sbjct: 2106 ILKWLDHVLN 2115
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 4 WVEHVL 9
WVEH L
Sbjct: 1596 WVEHKL 1601
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 WVEHVL 9
WVEH L
Sbjct: 1596 WVEHKL 1601
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 WVEHVL 9
WVEH L
Sbjct: 1596 WVEHKL 1601
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 WVEHVL 9
WVEH L
Sbjct: 1596 WVEHKL 1601
>sp|PG061_MONPV|PROTEIN OPG061|Monkeypox virus (MPXV)
Query: 3 TWVEHVLN 10
TWV V+N
Sbjct: 167 TWVTSVIN 174
>sp|PG061_VACCC|PROTEIN OPG061|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 TWVEHVLN 10
TWV V+N
Sbjct: 167 TWVTSVIN 174
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 1 VATWVEHVL 9
++ WV H++
Sbjct: 30 ISVWVSHII 38
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 VATWVEHVL 9
++ WV H++
Sbjct: 30 ISVWVSHII 38
>sp|PG061_VARV|PROTEIN OPG061|Variola virus
Query: 3 TWVEHVLN 10
TWV V+N
Sbjct: 167 TWVTSVIN 174
>sp|PG061_VAR67|PROTEIN OPG061|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 TWVEHVLN 10
TWV V+N
Sbjct: 167 TWVTSVIN 174
>sp|PG061_VACCP|PROTEIN OPG061|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 TWVEHVLN 10
TWV V+N
Sbjct: 167 TWVTSVIN 174
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 WVEHVL 9
W+EH L
Sbjct: 1596 WIEHKL 1601
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 ATWVEHV 8
ATW H+
Sbjct: 3368 ATWASHI 3374
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 ATWVEHV 8
ATW H+
Sbjct: 3368 ATWASHI 3374
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 ATWVEHV 8
ATW H+
Sbjct: 3368 ATWASHI 3374
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 ATWVEHV 8
ATW H+
Sbjct: 3367 ATWASHI 3373
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 ATWVEHV 8
ATW H+
Sbjct: 3367 ATWASHI 3373
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 ATWVEHV 8
ATW H+
Sbjct: 3367 ATWASHI 3373
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 ATWVEHV 8
ATW H+
Sbjct: 3367 ATWASHI 3373
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 ATWVEHV 8
ATW H+
Sbjct: 3367 ATWASHI 3373
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 1 VATWVEHVLN 10
++ WV H ++
Sbjct: 380 ISAWVHHCIS 389
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 3 TWVEH 7
TWV H
Sbjct: 322 TWVRH 326
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 VATWVEH 7
+ TW+ H
Sbjct: 1104 INTWIRH 1110
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VATWVEH 7
+ TW+ H
Sbjct: 1104 INTWIRH 1110
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 VATWVEHVLN 10
V WV HVL+
Sbjct: 1980 VWDWVLHVLS 1989
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 1 VATWVEH 7
+A W++H
Sbjct: 423 MAQWIQH 429
>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)
Query: 6 EHVLN 10
EHVLN
Sbjct: 120 EHVLN 124
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 VATWVE 6
VATW++
Sbjct: 216 VATWLQ 221
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 VATWVE 6
VATW++
Sbjct: 216 VATWLQ 221
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 VATWVE 6
VATW++
Sbjct: 216 VATWLQ 221
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 1 VATWVEHVLN 10
++ W+ H ++
Sbjct: 377 ISAWIHHCIS 386
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 1 VATWVEHVLN 10
++ W+ H ++
Sbjct: 381 ISAWIHHCIS 390
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 ATWVEH 7
+TWV H
Sbjct: 59 STWVNH 64
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 2 ATWVEH 7
+TWV H
Sbjct: 59 STWVNH 64
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 ATWVEH 7
+TWV H
Sbjct: 59 STWVNH 64
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 2 ATWVEH 7
+TWV H
Sbjct: 59 STWVNH 64
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 3 TWVEHV 8
TW +H+
Sbjct: 1212 TWAQHL 1217
98|SequenceR|495|486|ETEPIVATWV
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 2 TEPIVATWV 10
T P V +WV
Sbjct: 1100 TNPTVNSWV 1108
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 4 PIVATW 9
PIVA W
Sbjct: 399 PIVANW 404
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 1 ETEPIVATW 9
+ EP+V+ W
Sbjct: 119 QAEPLVSAW 127
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 2 TEPIVATWV 10
T+P+ A W+
Sbjct: 17 TQPLAAPWL 25
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 2 TEPIVATW 9
++P+V+ W
Sbjct: 129 SQPLVSAW 136
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ETEPIVA 7
ETEPIV
Sbjct: 1012 ETEPIVG 1018
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ETEPIVA 7
ETEPIV
Sbjct: 1022 ETEPIVG 1028
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ETEPIVA 7
ETEPIV
Sbjct: 1012 ETEPIVG 1018
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ETEPIVA 7
ETEPIV
Sbjct: 1012 ETEPIVG 1018
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ETEPIVA 7
ETEPIV
Sbjct: 1018 ETEPIVG 1024
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 2 TEPIVATWV 10
TEP + W+
Sbjct: 584 TEPYRSAWI 592
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 2 TEPIVATWV 10
TEP + W+
Sbjct: 584 TEPYRSAWI 592
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 4 PIVATW 9
PIV+ W
Sbjct: 155 PIVSAW 160
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 310 QTDPAVKNWM 319
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 310 QTDPAVKNWM 319
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 310 QTDPAVKNWM 319
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ETEPIVA 7
ETEPI+
Sbjct: 1016 ETEPIIG 1022
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 2 TEPIVATWV 10
TEP + W+
Sbjct: 576 TEPYRSAWI 584
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 310 QTDPAVKNWM 319
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 310 QTDPAVKNWM 319
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 311 QTDPAVKNWM 320
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 310 QTDPAVKNWM 319
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 310 QTDPAVKNWM 319
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 310 QTDPAVKNWM 319
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 308 QTDPAVKNWM 317
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 305 QTDPAVKNWM 314
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 305 QTDPAVKNWM 314
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 310 QTDPAVKNWM 319
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 305 QTDPAVKNWM 314
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 305 QTDPAVKNWM 314
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 311 QTDPAVKNWM 320
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 305 QTDPAVKNWM 314
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 305 QTDPAVKNWM 314
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 4 PIVATW 9
PIV+ W
Sbjct: 176 PIVSAW 181
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 310 QTDPAVKNWM 319
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 4 PIVATW 9
PIV+ W
Sbjct: 176 PIVSAW 181
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 310 QTDPAVKNWM 319
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 308 QTDPAVKNWM 317
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ETEPIVATWV 10
+T+P V W+
Sbjct: 310 QTDPAVKNWM 319
>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41
Query: 1 ETEPIVATW 9
+ +P+V+ W
Sbjct: 120 QVDPLVSAW 128
99|SequenceR|500|491|IRRVAETEPI
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 RRVAETEPI 10
RRV E+EP+
Sbjct: 1850 RRVTESEPV 1858
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 RRVAETEPI 10
RRV E+EP+
Sbjct: 1852 RRVTESEPV 1860
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 2 RRVAETEP 9
RR+ ETEP
Sbjct: 120 RRLFETEP 127
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 2 RRVAETEP 9
RR+ ETEP
Sbjct: 120 RRLFETEP 127
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 2 RRVAETEP 9
RR+ ETEP
Sbjct: 120 RRLFETEP 127
>sp|TAT_HV1C4|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 IRRVAETEPI 10
+ R AET+P+
Sbjct: 91 VEREAETDPL 100
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 3 RVAETEPI 10
R+A+++PI
Sbjct: 982 RIADSKPI 989
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 RRVAETEPI 10
RRVA T P+
Sbjct: 276 RRVAITHPL 284
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 RRVAETEPI 10
RRVA T P+
Sbjct: 251 RRVAITHPL 259
100|SequenceR|505|496|GDREVIRRVA
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 GDREVIRRVA 10
GD V +RVA
Sbjct: 2055 GDTPVFKRVA 2064
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 GDREVIRRVA 10
GD V +RVA
Sbjct: 2055 GDTLVFKRVA 2064
>sp|NEF_HV1MP|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 DREVIR 7
DREV+R
Sbjct: 172 DREVLR 177
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 2 DREVIRRV 9
D+E IRRV
Sbjct: 112 DKEEIRRV 119
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 2 DREVIRRV 9
D+E IRRV
Sbjct: 112 DKEEIRRV 119
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 2 DREVIRRV 9
D+E IRRV
Sbjct: 112 DKEEIRRV 119
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 2 DREVIRRV 9
D+E IRRV
Sbjct: 112 DKEEIRRV 119
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 2 DREVIRRV 9
D+E IRRV
Sbjct: 112 DKEEIRRV 119
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 2 DREVIRRV 9
D+E IRRV
Sbjct: 112 DKEEIRRV 119
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 2 DREVIRRV 9
D+E IRRV
Sbjct: 112 DKEEIRRV 119
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 2 DREVIRRV 9
D+E IRRV
Sbjct: 112 DKEEIRRV 119
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 DREVIRRV 9
D+E IRRV
Sbjct: 112 DKEEIRRV 119
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 EVIRRVA 10
EV+R+VA
Sbjct: 967 EVVRKVA 973
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 DREVIRRV 9
D+E IRRV
Sbjct: 112 DKEEIRRV 119
>sp|NEF_HV1VI|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 DREVIR 7
DREV+R
Sbjct: 177 DREVLR 182
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 DREVIRRVA 10
DR+++ R+A
Sbjct: 343 DRDLVYRIA 351
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DREVIRRVA 10
DR+++ R+A
Sbjct: 343 DRDLVYRIA 351
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 DREVIRRVA 10
DR+++ R+A
Sbjct: 343 DRDLVYRIA 351
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GDREVIRRV 9
G+R++ RR+
Sbjct: 253 GERDLTRRI 261
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GDREVIRRV 9
G+R++ RR+
Sbjct: 253 GERDLTRRI 261
101|SequenceR|510|501|AAESLGDREV
>sp|GP42_EBVG|GLYCOPROTEIN 42|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 AAESLGDREV 10
A + GD+EV
Sbjct: 67 AEQEYGDKEV 76
>sp|GP42_EBVB9|GLYCOPROTEIN 42|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 AAESLGDREV 10
A + GD+EV
Sbjct: 67 AEQEYGDKEV 76
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 AAESLGDREV 10
AAE+ DRE+
Sbjct: 645 AAETAVDREI 654
>sp|VP30_EBOSU|TRANSCRIPTIONAL activator VP30|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 ESLGDREV 10
ESL DRE+
Sbjct: 93 ESLTDREL 100
>sp|VP30_EBOZM|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 ESLGDREV 10
ESL DRE+
Sbjct: 93 ESLTDREL 100
>sp|VP30_EBOZ5|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 ESLGDREV 10
ESL DRE+
Sbjct: 93 ESLTDREL 100
102|SequenceR|515|506|LRSQAAAESL
>sp|NCAP_HENDH|NUCLEOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 LRSQAAAESL 10
+RS +AAES+
Sbjct: 59 IRSPSAAESM 68
>sp|NCAP_NIPAV|NUCLEOPROTEIN virus
Query: 1 LRSQAAAESL 10
+RS +AAES+
Sbjct: 59 IRSPSAAESM 68
103|SequenceR|520|511|SMQSQLRSQA
***** No hits found ******
104|SequenceR|525|516|VLQQGSMQSQ
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 VLQQGSMQSQ 10
+LQQ S Q+Q
Sbjct: 1739 LLQQASKQAQ 1748
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 VLQQGSMQSQ 10
+LQQ S Q+Q
Sbjct: 1739 LLQQASKQAQ 1748
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 VLQQGSMQSQ 10
++QQ S Q+Q
Sbjct: 1739 LMQQASKQAQ 1748
105|SequenceR|530|521|VHSQEVLQQG
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 2 HSQEVLQQG 10
HS+ +LQ G
Sbjct: 29 HSESILQLG 37
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 VHSQEVLQ 8
+H QEVL+
Sbjct: 551 LHQQEVLE 558
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 2 HSQEVLQ 8
H QEVL+
Sbjct: 552 HQQEVLE 558
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 2 HSQEVLQ 8
H QEVL+
Sbjct: 552 HQQEVLE 558
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 2 HSQEVLQ 8
H QEVL+
Sbjct: 552 HQQEVLE 558
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 1 VHSQEVLQ 8
+ SQEVLQ
Sbjct: 83 ISSQEVLQ 90
>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)
Query: 2 HSQEVLQQ 9
H QE+L Q
Sbjct: 69 HLQEILAQ 76
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 VHSQEVLQ 8
V+SQ VLQ
Sbjct: 241 VYSQRVLQ 248
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 1 VHSQEVLQ 8
V+SQ VLQ
Sbjct: 241 VYSQRVLQ 248
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 1 VHSQEVLQ 8
VH QEV++
Sbjct: 170 VHGQEVVR 177
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 1 VHSQEVLQ 8
VH QEV++
Sbjct: 165 VHGQEVVR 172
106|SequenceR|535|526|LTSLVVHSQE
>sp|E434_ADE02|EARLY 4 ORF6 protein|Human adenovirus C serotype 2
Query: 1 LTSLVVHSQE 10
+TS+++H E
Sbjct: 109 MTSMMIHGYE 118
107|SequenceR|540|531|IHPEWLTSLV
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 EWLTSL 9
EWLTSL
Sbjct: 1649 EWLTSL 1654
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 HPEWLTS 8
H EW+TS
Sbjct: 631 HEEWITS 637
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 HPEWLTS 8
H EW+TS
Sbjct: 631 HEEWITS 637
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 HPEWLTSLV 10
H EW+T+ V
Sbjct: 639 HEEWVTAAV 647
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 2 HPEWLTSLV 10
H EW+T+ V
Sbjct: 639 HEEWVTAAV 647
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 2 HPEWLTSL 9
+PEW+ L
Sbjct: 291 YPEWIAQL 298
>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United
Query: 1 IHPEWLTSL 9
+HP W T +
Sbjct: 262 VHPGWKTCI 270
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 HPEWLT 7
HP+W++
Sbjct: 1838 HPDWIS 1843
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PEWLT 7
PEW+T
Sbjct: 177 PEWVT 181
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PEWLT 7
PEW+T
Sbjct: 177 PEWVT 181
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 2 HPEWLTSLV 10
HP +L SLV
Sbjct: 47 HPGFLASLV 55
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IHPEWLTSL 9
+ PEW+ S
Sbjct: 577 LSPEWVKSF 585
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 HPEWLTS 8
H EW+T+
Sbjct: 631 HEEWITN 637
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IHPEWLTSL 9
+ PEW+ S
Sbjct: 577 LSPEWVKSF 585
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 2 HPEWLTS 8
+PEW+ +
Sbjct: 293 YPEWIVT 299
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 2 HPEWLTS 8
+PEW+ +
Sbjct: 295 YPEWIMT 301
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 IHPEWLTSLV 10
+H EW L+
Sbjct: 505 VHREWFNDLL 514
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 2 HPEWLTS 8
+PEW+ +
Sbjct: 294 YPEWIMT 300
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 WLTSLV 10
WLTSL+
Sbjct: 1221 WLTSLL 1226
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 WLTSLV 10
WLTSL+
Sbjct: 1221 WLTSLL 1226
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 HPEWL 6
HP W+
Sbjct: 534 HPHWV 538
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 WLTSLV 10
WLTSL+
Sbjct: 1221 WLTSLL 1226
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 WLTSLV 10
WLTSL+
Sbjct: 1222 WLTSLL 1227
>sp|K7_HHV8P|PROTEIN K7|Human herpesvirus 8 type P
Query: 1 IHPEWLTS 8
I+P WL++
Sbjct: 58 IYPSWLSA 65
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 WLTSLV 10
WLTSL+
Sbjct: 1222 WLTSLL 1227
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 WLTSLV 10
WLTSL+
Sbjct: 1221 WLTSLL 1226
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 HPEWLT 7
H EW+T
Sbjct: 632 HEEWVT 637
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 2 HPEWLTS 8
+PEW+ +
Sbjct: 295 YPEWILT 301
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 IHPEWLTSL 9
+H EW L
Sbjct: 506 VHREWFNDL 514
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 2 HPEWLTS 8
+PEW+ +
Sbjct: 288 YPEWIMT 294
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 2 HPEWLTS 8
+PEW+ +
Sbjct: 291 YPEWILT 297
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 1 IHPEWLT 7
+HP W++
Sbjct: 66 LHPSWVS 72
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IHPEW 5
IH EW
Sbjct: 126 IHDEW 130
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 1 IHPEW 5
IH EW
Sbjct: 126 IHDEW 130
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 IHPEWLTS 8
+H E+LTS
Sbjct: 1554 LHKEFLTS 1561
108|SequenceR|545|536|VQRQTIHPEW
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 QRQTIHPEW 10
Q ++HP W
Sbjct: 674 QESSLHPNW 682
>sp|VLTF1_VAR67|LATE transcription factor 1|Variola virus (isolate
Query: 3 RQTIHPEW 10
R IH EW
Sbjct: 147 RTVIHLEW 154
>sp|VLTF1_VACCC|LATE transcription factor 1|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 RQTIHPEW 10
R IH EW
Sbjct: 147 RTVIHLEW 154
>sp|VLTF1_VACCA|LATE transcription factor 1|Vaccinia virus (strain Ankara) (VACV)
Query: 3 RQTIHPEW 10
R IH EW
Sbjct: 147 RTVIHLEW 154
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 VQRQTIHPE 9
++RQ IH E
Sbjct: 713 LERQVIHAE 721
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 QRQTIHPEW 10
QR+ + P W
Sbjct: 2077 QRRVLKPRW 2085
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VQRQTIHPEW 10
V Q IH EW
Sbjct: 121 VSIQQIHDEW 130
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 1 VQRQTIHPEW 10
V Q IH EW
Sbjct: 121 VSIQQIHDEW 130
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 VQRQTIHPE 9
VQR T HP+
Sbjct: 2177 VQRLTPHPD 2185
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 VQRQTIHPE 9
++RQ IH E
Sbjct: 712 MERQVIHAE 720
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 VQRQTIHPE 9
VQR T HP+
Sbjct: 2148 VQRLTPHPD 2156
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 QRQTIHPEW 10
QR+ + P W
Sbjct: 2058 QRKELKPRW 2066
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 5 TIHPEW 10
+IHP W
Sbjct: 1938 SIHPVW 1943
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 5 TIHPEW 10
+IHP W
Sbjct: 1938 SIHPVW 1943
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 4 QTIHPEW 10
QT++P W
Sbjct: 366 QTMYPYW 372
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 5 TIHPEW 10
+IHP W
Sbjct: 1931 SIHPIW 1936
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 5 TIHPEW 10
+IHP W
Sbjct: 1934 SIHPIW 1939
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 1 VQRQTI 6
+QRQTI
Sbjct: 334 IQRQTI 339
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 1 VQRQTI 6
+QRQTI
Sbjct: 333 IQRQTI 338
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 5 TIHPEW 10
++HP W
Sbjct: 1945 SLHPVW 1950
109|SequenceR|550|541|AWAKEVQRQT
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 2 WAKEVQRQT 10
W K V+RQT
Sbjct: 353 WRKMVERQT 361
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 2 WAKEVQRQT 10
W K V+RQT
Sbjct: 353 WRKVVERQT 361
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 AWAKEVQRQT 10
+W +E+Q QT
Sbjct: 174 SWEQELQHQT 183
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 AWAKEVQR 8
AWA +QR
Sbjct: 125 AWASTLQR 132
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 2 WAKEVQRQT 10
W K V++QT
Sbjct: 353 WRKVVEQQT 361
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 2 WAKEVQRQT 10
W K V++QT
Sbjct: 353 WRKVVEQQT 361
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 2 WAKEVQRQT 10
W K V++QT
Sbjct: 353 WRKVVEQQT 361
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 WAKEVQRQT 10
W++++ R+T
Sbjct: 552 WSRDLSRKT 560
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 WAKEVQRQT 10
W++++ R+T
Sbjct: 552 WSRDLSRKT 560
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 2 WAKEVQRQT 10
W K V++QT
Sbjct: 353 WRKIVEQQT 361
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 2 WAKEVQRQT 10
W K V++QT
Sbjct: 353 WRKIVEQQT 361
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 2 WAKEVQRQT 10
W K V++QT
Sbjct: 353 WRKIVEQQT 361
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 2 WAKEVQRQT 10
W K V++QT
Sbjct: 353 WRKIVEQQT 361
>sp|UL117_HCMVM|PROTEIN UL117|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AWAKEVQRQT 10
++ +EV RQT
Sbjct: 140 SFRREVDRQT 149
>sp|UL117_HCMVA|PROTEIN UL117|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AWAKEVQRQT 10
++ +EV RQT
Sbjct: 139 SFRREVDRQT 148
>sp|TAT_HV1S3|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 4 KEVQRQT 10
KEV+R+T
Sbjct: 89 KEVERET 95
110|SequenceR|555|546|RKQLLAWAKE
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 QLLAWAKE 10
++ AWAKE
Sbjct: 1818 EIRAWAKE 1825
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 QLLAWAKE 10
++ AWAKE
Sbjct: 1818 EIRAWAKE 1825
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 QLLAWAKE 10
++ AWAKE
Sbjct: 1818 EIRAWAKE 1825
>sp|GPX_MCV1|GLUTATHIONE peroxidase|Molluscum contagiosum virus subtype 1
Query: 3 QLLAWA 8
QL+AW+
Sbjct: 163 QLIAWS 168
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 QLLAWAKE 10
++ AWAKE
Sbjct: 1818 EIRAWAKE 1825
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 QLLAWAKE 10
++ AWAKE
Sbjct: 1818 EIRAWAKE 1825
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 QLLAWAKE 10
++ AWAKE
Sbjct: 1818 EIRAWAKE 1825
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 KQLLAWAKE 10
+QL W K+
Sbjct: 438 RQLFFWGKD 446
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 KQLLAWAKE 10
+QL W K+
Sbjct: 438 RQLFFWGKD 446
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 QLLAWAKE 10
++ AWAKE
Sbjct: 1818 EIRAWAKE 1825
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 QLLAWAKE 10
++ AWAKE
Sbjct: 1818 EIRAWAKE 1825
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 QLLAWAKE 10
++ AWAKE
Sbjct: 1818 EIRAWAKE 1825
111|SequenceR|564|551|DLAQHTKPIRKQLL
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LAQHTKPIRK 11
LAQHT P K
Sbjct: 206 LAQHTPPFLK 215
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LAQHTKPIRK 11
LAQHT P K
Sbjct: 206 LAQHTPPFLK 215
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 4 QHTKPIRKQLL 14
+ T PI+KQ L
Sbjct: 510 ESTNPIKKQFL 520
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 4 QHTKPIRKQLL 14
+ T PI+KQ L
Sbjct: 510 ESTNPIKKQFL 520
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 6 TKPIRKQLL 14
T+P+RK++L
Sbjct: 185 TEPVRKKIL 193
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 1 DLAQHTKPIRKQL 13
DLA+ P+ +QL
Sbjct: 751 DLAERADPLIRQL 763
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 6 TKPIRKQL 13
T+PI+KQ+
Sbjct: 2208 TRPIQKQI 2215
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 6 TKPIRKQL 13
T+PI+KQ+
Sbjct: 2208 TRPIQKQI 2215
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 5 HTKPIRKQLL 14
H KPI Q L
Sbjct: 2609 HEKPIHMQTL 2618
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 4 QHTKPIRKQLL 14
+ T P RKQ L
Sbjct: 510 ESTDPARKQFL 520
>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61
Query: 3 AQHTKP 8
AQHT+P
Sbjct: 357 AQHTQP 362
>sp|NS1_INBVJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Victoria/1987)
Query: 5 HTKPIR 10
H+KPIR
Sbjct: 251 HSKPIR 256
>sp|NS1_INBYA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 5 HTKPIR 10
H+KPIR
Sbjct: 251 HSKPIR 256
>sp|NS1_INBPA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/PA/1979)
Query: 5 HTKPIR 10
H+KPIR
Sbjct: 251 HSKPIR 256
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 3 AQHTKPIRK 11
A+HT PI K
Sbjct: 441 AEHTTPILK 449
>sp|NS1_INBSJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/1964)
Query: 5 HTKPIR 10
H+KPIR
Sbjct: 251 HSKPIR 256
>sp|NS1_INBMD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Maryland/1959)
Query: 5 HTKPIR 10
H+KPIR
Sbjct: 251 HSKPIR 256
>sp|NS1_INBSI|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 5 HTKPIR 10
H+KPIR
Sbjct: 251 HSKPIR 256
>sp|NS1_INBRU|NON-STRUCTURAL protein 1|Influenza B virus (strain B/RU/1969)
Query: 5 HTKPIR 10
H+KPIR
Sbjct: 251 HSKPIR 256
>sp|NS1_INBHT|NON-STRUCTURAL protein 1|Influenza B virus (strain B/HT/1984)
Query: 5 HTKPIR 10
H+KPIR
Sbjct: 251 HSKPIR 256
>sp|NS1_INBAD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 5 HTKPIR 10
H+KPIR
Sbjct: 251 HSKPIR 256
>sp|NS1_INBAC|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 5 HTKPIR 10
H+KPIR
Sbjct: 251 HSKPIR 256
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 AQHTKPIRK 11
A+HT PI K
Sbjct: 441 AEHTTPILK 449
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 2 LAQHTKPIRKQL 13
A+ + P++KQ+
Sbjct: 40 FAEDSSPLKKQI 51
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LAQHTKPIRKQL 13
A+ + P++KQ+
Sbjct: 40 FAEDSSPLKKQI 51
>sp|NS1_INBHK|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Hong
Query: 5 HTKPIR 10
H+KPIR
Sbjct: 251 HSKPIR 256
>sp|NS1_INBBA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/BA/1978)
Query: 5 HTKPIR 10
H+KPIR
Sbjct: 251 HSKPIR 256
>sp|NS1_INBGA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GA/1986)
Query: 5 HTKPIR 10
H+KPIR
Sbjct: 251 HSKPIR 256
>sp|NS1_INB|NON-STRUCTURAL protein 1|Influenza B virus (strain B/ID/1986)
Query: 5 HTKPIR 10
H+KPIR
Sbjct: 251 HSKPIR 256
>sp|NS1_INBLE|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Lee/1940)
Query: 5 HTKPIR 10
H+KPIR
Sbjct: 251 HSKPIR 256
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 DLAQHTKPI 9
D A H KP+
Sbjct: 725 DCAAHLKPL 733
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 DLAQHTKPI 9
D A H KP+
Sbjct: 725 DCAAHLKPL 733
THE END