COASY_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|VLLGSRFVAM

***** No hits found ******


2|SequenceR|15|6|LPTTLVLLGS

>sp|HISX_PICTO|HISTIDINOL dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 LPTTLVLLG 9
LP+TL++LG
Sbjct: 106 LPSTLMMLG 114


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 1 LPTTLVLLG 9
LP T V+LG
Sbjct: 67 LPETFVILG 75


>sp|Y132_THEON|MEMO1 family protein TON_0132|Thermococcus onnurineus (strain NA1)

Query: 1 LPTTLVLLG 9
LP T V+LG
Sbjct: 67 LPETFVILG 75


>sp|Y1726_THEGJ|MEMO1 family protein TGAM_1726|Thermococcus gammatolerans (strain DSM

Query: 1 LPTTLVLLG 9
LP T V+LG
Sbjct: 67 LPETFVILG 75


>sp|PRIS_METTP|DNA primase small subunit PriS|Methanothrix thermoacetophila (strain

Query: 2 PTTLVLLG 9
PTTL L+G
Sbjct: 359 PTTLELMG 366


>sp|COBS_PYRAE|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LPTTLVLLGS 10
+PTTL+ LG+
Sbjct: 40 IPTTLLYLGA 49


>sp|Y912_METMA|UPF0288 protein MM_0912|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PTTLVLLG 9
PTTL +LG
Sbjct: 365 PTTLEILG 372


>sp|Y3997_METAC|UPF0288 protein MA_3997|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PTTLVLLG 9
PTTL +LG
Sbjct: 365 PTTLEILG 372


>sp|Y1357_DESA1|MEMO1 family protein DKAM_1357|Desulfurococcus amylolyticus (strain DSM

Query: 2 PTTLVLLGS 10
P T+V+LG+
Sbjct: 78 PDTIVILGT 86


>sp|Y706_METBF|UPF0288 protein Mbar_A0706|Methanosarcina barkeri (strain Fusaro /

Query: 2 PTTLVLLG 9
PTTL +LG
Sbjct: 365 PTTLEILG 372




3|SequenceR|20|11|PALSALPTTL

>sp|COBS_PYRAE|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PALSALPTTL 10
P ++A+PTTL
Sbjct: 35 PIIAAIPTTL 44




4|SequenceR|25|16|ISALRPALSA

***** No hits found ******


5|SequenceR|30|21|AASTLISALR

***** No hits found ******


6|SequenceR|35|26|HNVLRAASTL

>sp|UPP_METS5|URACIL phosphoribosyltransferase|Metallosphaera sedula (strain ATCC

Query: 2 NVLRAASTL 10
NVLRAA+ L
Sbjct: 77 NVLRAATPL 85


>sp|CIMA_METMJ|PUTATIVE (R)-citramalate synthase CimA|Methanoculleus marisnigri (strain

Query: 1 HNVLRAAST 9
H V+R AST
Sbjct: 292 HGVMRDAST 300


>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HNVLRAASTL 10
HNVL STL
Sbjct: 139 HNVLPHLSTL 148




7|SequenceR|40|31|HVYLTHNVLR

>sp|ECFA_METAC|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 VYLTHNV 8
VY+THN+
Sbjct: 190 VYITHNL 196


>sp|COFD_METHJ|2-PHOSPHO-L-LACTATE transferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 YLTHNVLR 10
+LTH+VL+
Sbjct: 72 FLTHDVLK 79


>sp|FLAI_SULAC|ARCHAEAL flagellar ATPase motor FlaI|Sulfolobus acidocaldarius (strain ATCC

Query: 1 HVYLTHNVL 9
HVY+ H V
Sbjct: 149 HVYIVHKVF 157


>sp|G1PDH_ARCFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HVYLTHNVL 9
HVY+ NV+
Sbjct: 11 HVYIGENVI 19


>sp|XACJ_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacJ|Haloferax volcanii (strain ATCC

Query: 2 VYLTHN 7
VY+THN
Sbjct: 189 VYVTHN 194


>sp|Y1307_METJA|UNCHARACTERIZED protein MJ1307|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VYLTHNVL 9
VYLTH ++
Sbjct: 36 VYLTHYII 43


>sp|Y1321_PYRHO|UPF0252 protein PH1321|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VYLTHNVLR 10
VY+ H V+R
Sbjct: 235 VYIVHTVVR 243


>sp|Y1037_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 VYLTHNV 8
VY THN+
Sbjct: 190 VYTTHNL 196




8|SequenceR|45|36|MGPQLHVYLT

>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PQLHVY 8
P LHVY
Sbjct: 703 PHLHVY 708


>sp|QUEE_ARCFU|7-CARBOXY-7-DEAZAGUANINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PQLHVYL 9
PQ+H YL
Sbjct: 216 PQVHKYL 222


>sp|Y449_METJA|UNCHARACTERIZED transporter MJ0449|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MGPQLHVYL 9
+GP++HV L
Sbjct: 234 VGPRIHVEL 242


>sp|TYW3_SACS2|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 2 GPQLHVY 8
GP +H+Y
Sbjct: 99 GPIIHIY 105


>sp|Y2580_AERPE|UNCHARACTERIZED protein APE_2580|Aeropyrum pernix (strain ATCC 700893

Query: 2 GPQLHVYLT 10
GP VYLT
Sbjct: 172 GPVYRVYLT 180


>sp|GATB_SULTO|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfurisphaera tokodaii (strain DSM

Query: 1 MGPQLHVYLT 10
+G ++HV+LT
Sbjct: 4 IGLEVHVHLT 13


>sp|GATB_SULAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfolobus acidocaldarius (strain ATCC

Query: 1 MGPQLHVYLT 10
+G ++HV+LT
Sbjct: 4 IGLEVHVHLT 13


>sp|PIMT_IGNH4|PROTEIN-L-ISOASPARTATE O-methyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 MGPQLHVY 8
+GP+ HVY
Sbjct: 97 VGPEGHVY 104




9|SequenceR|50|41|PGELSMGPQL

>sp|TRM1_PYRAR|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum arsenaticum

Query: 1 PGELSMGP 8
PGE S+GP
Sbjct: 254 PGERSLGP 261


>sp|DTDA_METBU|D-AMINOACYL-TRNA deacylase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PGELSMG 7
PGELSM
Sbjct: 121 PGELSMA 127


>sp|G3P_METB6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoregula boonei (strain DSM 21154

Query: 1 PGELSMGP 8
PGE+ GP
Sbjct: 172 PGEIKKGP 179


>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 1 PGELSMGPQL 10
P EL +GP++
Sbjct: 203 PAELLIGPEV 212


>sp|ARFB_METST|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanosphaera stadtmanae (strain ATCC

Query: 2 GELSMGPQL 10
GELSMG L
Sbjct: 152 GELSMGAVL 160


>sp|Y1865_METTH|UPF0288 protein MTH_1865|Methanothermobacter thermautotrophicus (strain

Query: 1 PGELSMGP 8
P E++MGP
Sbjct: 102 PSEIAMGP 109


>sp|PYRB_METST|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaera stadtmanae

Query: 1 PGELSMGPQL 10
P EL M P++
Sbjct: 189 PSELEMPPEI 198


>sp|Y593_PYRCJ|UPF0201 protein Pcal_0593|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PGELSMGP 8
PGE +GP
Sbjct: 102 PGESPLGP 109


>sp|Y685_PYRNV|UPF0201 protein Tneu_0685|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PGELSMGP 8
PGE +GP
Sbjct: 102 PGESPLGP 109


>sp|GLYA_KORCO|SERINE hydroxymethyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GELSMGP 8
G +SMGP
Sbjct: 120 GHISMGP 126


>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 1 PGELSMGPQL 10
PG L GP++
Sbjct: 573 PGVLDAGPEI 582




10|SequenceR|55|46|SQPQAPGELS

>sp|AROD_ARCFU|3-DEHYDROQUINATE dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PQAPGELS 10
P+APG++S
Sbjct: 177 PKAPGQIS 184


>sp|RS3_SULTO|SMALL ribosomal subunit protein uS3|Sulfurisphaera tokodaii (strain DSM

Query: 2 QPQAPGE 8
QP+ PGE
Sbjct: 198 QPKGPGE 204


>sp|SPCS_METJA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 QPQAPG 7
QP+APG
Sbjct: 101 QPKAPG 106


>sp|RS6E_STAMF|SMALL ribosomal subunit protein eS6|Staphylothermus marinus (strain

Query: 1 SQPQAPGE 8
S PQAP E
Sbjct: 9 SDPQAPKE 16


>sp|UVRB_METAC|UVRABC system protein B|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 QAPGELS 10
Q PGELS
Sbjct: 6 QTPGELS 12


>sp|TRPF_METAR|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanocella arvoryzae (strain DSM 22066

Query: 2 QPQAPGEL 9
QP PGE+
Sbjct: 62 QPSTPGEV 69




11|SequenceR|60|51|AQVPSSQPQA

>sp|RS3A_PYRIL|SMALL ribosomal subunit protein eS1|Pyrobaculum islandicum (strain DSM

Query: 1 AQVPSSQPQ 9
A+VP+S+PQ
Sbjct: 42 AEVPASEPQ 50




12|SequenceR|65|56|LVEFTAQVPS

>sp|SYE_THEKO|GLUTAMATE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 EFTAQVP 9
EFTA++P
Sbjct: 429 EFTAEIP 435


>sp|ARLY_METAR|ARGININOSUCCINATE lyase|Methanocella arvoryzae (strain DSM 22066

Query: 3 EFTAQVPS 10
EFTA +P+
Sbjct: 23 EFTASIPA 30




13|SequenceR|70|61|HTIFDLVEFT

>sp|HYPA_METKA|HYDROGENASE maturation factor HypA|Methanopyrus kandleri (strain AV19 /

Query: 1 HTIFDLVEFT 10
HT FDL E T
Sbjct: 93 HTAFDLSELT 102


>sp|COST_HALSA|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 700922

Query: 1 HTIFDLVEF 9
HTI D+ EF
Sbjct: 490 HTIIDIQEF 498


>sp|COST_HALS3|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 29341

Query: 1 HTIFDLVEF 9
HTI D+ EF
Sbjct: 490 HTIIDIQEF 498


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HTIFDLVEF 9
H FDL EF
Sbjct: 187 HWFFDLSEF 195


>sp|TRPB_META3|TRYPTOPHAN synthase beta chain|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 HTIFDLVEF 9
HT+ + +EF
Sbjct: 381 HTVMNFIEF 389


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 HTIFDLVEF 9
H FDL EF
Sbjct: 187 HWFFDLSEF 195


>sp|DNLI_THEON|DNA ligase|Thermococcus onnurineus (strain NA1)

Query: 5 DLVEFT 10
DLVEFT
Sbjct: 478 DLVEFT 483


>sp|DNLI_THEKO|DNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 DLVEFT 10
DLVEFT
Sbjct: 475 DLVEFT 480


>sp|DNLI_PYRHO|DNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 DLVEFT 10
DLVEFT
Sbjct: 475 DLVEFT 480


>sp|DNLI_PYRFU|DNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 DLVEFT 10
DLVEFT
Sbjct: 475 DLVEFT 480


>sp|DNLI_PYRAY|DNA ligase|Pyrococcus abyssi

Query: 5 DLVEFT 10
DLVEFT
Sbjct: 475 DLVEFT 480


>sp|DNLI_PYRAB|DNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 5 DLVEFT 10
DLVEFT
Sbjct: 475 DLVEFT 480


>sp|PYRC_THEKO|DIHYDROOROTASE kodakarensis (strain ATCC BAA-918

Query: 2 TIFDLVE 8
T+FD+VE
Sbjct: 312 TVFDIVE 318


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain

Query: 4 FDLVEFT 10
FDL EFT
Sbjct: 14 FDLSEFT 20




14|SequenceR|75|66|AGAYLHTIFD

>sp|COBQ_METMA|PROBABLE cobyric acid synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GAYLHTIFD 10
G YLH +FD
Sbjct: 423 GTYLHGLFD 431


>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GAYLHTIFD 10
G YLH +FD
Sbjct: 423 GTYLHGLFD 431


>sp|COBQ_METAC|PROBABLE cobyric acid synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GAYLHTIFD 10
G YLH +FD
Sbjct: 423 GTYLHGLFD 431


>sp|COBQ_METBU|PROBABLE cobyric acid synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GAYLHTIFD 10
G YLH +FD
Sbjct: 429 GTYLHGLFD 437


>sp|COBQ_META3|PROBABLE cobyric acid synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GAYLHTIFD 10
G Y H IFD
Sbjct: 432 GTYFHGIFD 440


>sp|COBQ_METAR|PROBABLE cobyric acid synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GAYLHTIFD 10
G YLH IF+
Sbjct: 423 GTYLHGIFN 431


>sp|SODM_HALHI|SUPEROXIDE dismutase [Mn]|Haloarcula hispanica

Query: 2 GAYLHTIF 9
G YLHT+F
Sbjct: 38 GHYLHTLF 45


>sp|SODM2_HALSA|SUPEROXIDE dismutase [Mn] 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 GAYLHTIF 9
G YLHT+F
Sbjct: 72 GHYLHTMF 79


>sp|GVPE_HALMT|TRANSCRIPTIONAL activator GvpE|Haloferax mediterranei (strain ATCC 33500

Query: 3 AYLHTIFD 10
+YLHTI D
Sbjct: 70 SYLHTIND 77


>sp|SODM_HALMA|SUPEROXIDE dismutase [Mn]|Haloarcula marismortui (strain ATCC 43049

Query: 2 GAYLHTIF 9
G YLHT+F
Sbjct: 75 GHYLHTLF 82


>sp|GCSPA_METS5|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Metallosphaera

Query: 1 AGAYLHTI 8
AGAY H+I
Sbjct: 77 AGAYPHSI 84


>sp|COBQ_METJA|PROBABLE cobyric acid synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GAYLHTIFD 10
G Y H IF+
Sbjct: 432 GTYFHGIFE 440


>sp|Y1020_METJA|UNCHARACTERIZED protein MJ1020|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GAYLHTI 8
GAYLH I
Sbjct: 96 GAYLHDI 102


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AGAYLHTI 8
AG YLH I
Sbjct: 224 AGYYLHKI 231


>sp|COBQ_HALMA|PROBABLE cobyric acid synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GAYLHTIF 9
G YLH +F
Sbjct: 431 GTYLHDLF 438


>sp|PURA_METBU|ADENYLOSUCCINATE synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 1 AGAYLHTI 8
AGA+LH +
Sbjct: 285 AGAHLHDV 292


>sp|GSA_AERPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GAYLHTI 8
GAYL+T+
Sbjct: 42 GAYLYTV 48


>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 4 YLHTIFD 10
YLH ++D
Sbjct: 63 YLHVLYD 69


>sp|Y1942_ARCFU|UNCHARACTERIZED protein AF_1942|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GAYLHT 7
G YLHT
Sbjct: 60 GVYLHT 65


>sp|COFH_HALSA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Halobacterium salinarum (strain ATCC

Query: 1 AGAYLHTI 8
AGA++H+I
Sbjct: 189 AGAHVHSI 196




15|SequenceR|80|71|HRHVDAGAYL

>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 2 RHVDAGAYL 10
RHVD G Y+
Sbjct: 1101 RHVDEGDYM 1109


>sp|Y1598_METJA|UPF0284 protein MJ1598|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HVDAGAYL 10
H+DAGA++
Sbjct: 94 HIDAGAFV 101


>sp|DLYKI_THEX4|D-LYXOSE ketol-isomerase|Thermofilum sp. (strain ex4484_79)

Query: 1 HRHVDAGAYL 10
HRH G+YL
Sbjct: 75 HRHPPIGSYL 84


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 3 HVDAGAY 9
+VDAGAY
Sbjct: 85 NVDAGAY 91


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 3 HVDAGAY 9
+VDAGAY
Sbjct: 85 NVDAGAY 91


>sp|Y963_METJA|UNCHARACTERIZED protein MJ0963|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HVDAGAY 9
HVD G Y
Sbjct: 125 HVDVGGY 131


>sp|RL2_THEAC|LARGE ribosomal subunit protein uL2|Thermoplasma acidophilum (strain

Query: 2 RHVDAGAYL 10
+HVD G Y+
Sbjct: 29 KHVDQGTYV 37


>sp|G3P_HALVA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula vallismortis (Halobacterium vallismortis)

Query: 2 RHVDAGA 8
+H+DAGA
Sbjct: 112 QHLDAGA 118


>sp|TRUB_PYRAE|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum aerophilum (strain ATCC

Query: 3 HVDAGAY 9
HV+AG Y
Sbjct: 162 HVEAGTY 168


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 HRHVDAGAY 9
H+H++AG +
Sbjct: 673 HKHMNAGRH 681


>sp|TRUB_PYRIL|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum islandicum (strain DSM

Query: 3 HVDAGAY 9
HV+AG Y
Sbjct: 162 HVEAGTY 168




16|SequenceR|85|76|IRVDLHRHVD

>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 IRVDLHRHVD 10
IR+ +HRH D
Sbjct: 252 IRLQVHRHSD 261


>sp|RRP4_PYRAE|EXOSOME complex component Rrp4|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 LHRHVD 10
LHRHVD
Sbjct: 96 LHRHVD 101


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 1 IRVDLHRHVD 10
+++DL RH D
Sbjct: 98 LKLDLSRHED 107


>sp|Y2548_HALWD|DUF123 domain-containing protein HQ_2548A|Haloquadratum walsbyi (strain

Query: 2 RVDLHRHV 9
RVD HR V
Sbjct: 71 RVDRHRRV 78


>sp|PYRC_SULAC|DIHYDROOROTASE acidocaldarius (strain ATCC 33909

Query: 3 VDLHRHV 9
VDLH HV
Sbjct: 48 VDLHVHV 54


>sp|SYY_NATPD|TYROSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 DLHRHVD 10
DLH H+D
Sbjct: 72 DLHAHLD 78


>sp|IDH_ARCFU|ISOCITRATE dehydrogenase [NADP]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IRVDLHRHV 9
+ D+HRH+
Sbjct: 383 VTYDIHRHM 391


>sp|Y417_METJA|UNCHARACTERIZED protein MJ0417|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IRVDLHRH 8
++VDLH H
Sbjct: 1 MKVDLHVH 8


>sp|PYRC_SACS2|DIHYDROOROTASE solfataricus (strain ATCC 35092

Query: 3 VDLHRHV 9
+DLH H+
Sbjct: 51 IDLHTHI 57


>sp|MAP2_METJA|METHIONINE aminopeptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IRVDLHRHVD 10
+++DL HVD
Sbjct: 82 VKLDLGAHVD 91


>sp|SYY_HALMA|TYROSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 DLHRHVD 10
DLH H+D
Sbjct: 71 DLHAHLD 77


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 2 RVDLHRHV 9
RV++HRH+
Sbjct: 375 RVEVHRHL 382


>sp|MAP2_SACS2|METHIONINE aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IRVDLHRHVD 10
+++DL H+D
Sbjct: 82 VKLDLGAHID 91


>sp|MFNA_METTH|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothermobacter

Query: 4 DLHRHVD 10
D+H H+D
Sbjct: 165 DIHLHID 171




17|SequenceR|90|81|INTLLIRVDL

>sp|Y934_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0934|Methanocaldococcus jannaschii

Query: 1 INTLLIRVDL 10
IN+L+++VD+
Sbjct: 176 INSLIVKVDI 185


>sp|PGK_PYRAE|PHOSPHOGLYCERATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 TLLIRVDL 10
TL+IR+D+
Sbjct: 22 TLIIRIDI 29


>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 3 TLLIRVDL 10
T+L+RVD+
Sbjct: 17 TVLVRVDI 24


>sp|PGK_METTH|PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 TLLIRVDL 10
T+L+RVD+
Sbjct: 22 TVLVRVDI 29


>sp|PGK_METMA|PHOSPHOGLYCERATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 TLLIRVDL 10
T+L+RVD+
Sbjct: 22 TILLRVDM 29




18|SequenceR|95|86|TSKTRINTLL

>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TSKTRINTLL 10
TSK +++TL+
Sbjct: 389 TSKVKVDTLI 398




19|SequenceR|100|91|LPPLFTSKTR

>sp|RL4_METHJ|LARGE ribosomal subunit protein uL4|Methanospirillum hungatei JF-1

Query: 1 LPPLFTSKTR 10
LPP+F+S+ R
Sbjct: 18 LPPVFSSEFR 27


>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 3 PLFTSKTR 10
PLF KTR
Sbjct: 616 PLFEEKTR 623


>sp|HEM1_SACS2|GLUTAMYL-TRNA reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LPPLFT 6
+PPLFT
Sbjct: 269 VPPLFT 274


>sp|HEM1_SACI7|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LPPLFT 6
+PPLFT
Sbjct: 269 VPPLFT 274


>sp|HEM1_SACI6|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LPPLFT 6
+PPLFT
Sbjct: 269 VPPLFT 274


>sp|HEM1_SACI4|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LPPLFT 6
+PPLFT
Sbjct: 269 VPPLFT 274


>sp|HEM1_SACI3|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LPPLFT 6
+PPLFT
Sbjct: 269 VPPLFT 274


>sp|HEM1_SACI2|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LPPLFT 6
+PPLFT
Sbjct: 269 VPPLFT 274


>sp|HEM1_SACI1|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LPPLFT 6
+PPLFT
Sbjct: 269 VPPLFT 274


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 LPPLFTSKTR 10
LPP + +TR
Sbjct: 818 LPPFYNLETR 827


>sp|GSA_METLZ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LPPLFTSKTR 10
+PP F ++TR
Sbjct: 164 VPPSFAAQTR 173


>sp|FLAB2_ARCFU|PROBABLE flagellin 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPPLFTSKT 9
LPP FT+ T
Sbjct: 197 LPPSFTNLT 205




20|SequenceR|105|96|QVSTPLPPLF

>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QVSTPLPP 8
Q STP PP
Sbjct: 1100 QTSTPYPP 1107


>sp|TF2B_SACSH|TRANSCRIPTION initiation factor IIB|Saccharolobus shibatae (strain ATCC 51178

Query: 2 VSTPLPP 8
VSTP PP
Sbjct: 8 VSTPCPP 14


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 2 VSTPLPP 8
VSTP PP
Sbjct: 11 VSTPCPP 17


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QVSTPLPP 8
++ TPLPP
Sbjct: 766 ELRTPLPP 773


>sp|ILVE_METJA|PUTATIVE branched-chain-amino-acid aminotransferase|Methanocaldococcus

Query: 2 VSTPLPPLF 10
++ P+PPL
Sbjct: 113 IAIPMPPLL 121


>sp|RAD50_HALVD|DNA double-strand break repair Rad50|Haloferax volcanii (strain ATCC

Query: 3 STPLPPL 9
+ PLPPL
Sbjct: 810 AAPLPPL 816


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QVSTPLPPL 9
++ PLPP
Sbjct: 852 EIQNPLPPF 860


>sp|HIS7_SACS2|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QVSTPLP 7
+VSTP+P
Sbjct: 29 KVSTPIP 35


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VSTPLPP 8
V TP+PP
Sbjct: 89 VRTPMPP 95


>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 2 VSTPLPP 8
VS P+PP
Sbjct: 13 VSVPVPP 19


>sp|WTPC_ARCFU|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Archaeoglobus fulgidus (strain

Query: 4 TPLPP 8
TPLPP
Sbjct: 63 TPLPP 67


>sp|RL1_METTP|LARGE ribosomal subunit protein uL1|Methanothrix thermoacetophila (strain

Query: 1 QVSTPLPP 8
++ TPLPP
Sbjct: 128 KMPTPLPP 135


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 1 QVSTPLPP 8
+VS P+PP
Sbjct: 12 KVSVPVPP 19


>sp|TRM1_METAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina acetivorans

Query: 1 QVSTPLPP 8
++S P+PP
Sbjct: 12 KISVPIPP 19


>sp|SURE_NATPD|5'-NUCLEOTIDASE SurE|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VSTPLPP 8
V+ PLPP
Sbjct: 168 VNAPLPP 174


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei

Query: 1 QVSTPLPP 8
++S P+PP
Sbjct: 12 KISVPVPP 19




21|SequenceR|110|101|PHALNQVSTP

>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PHALNQVSTP 10
PH +N + TP
Sbjct: 87 PHLINLIDTP 96


>sp|Y1331_METJA|ACYLPHOSPHATASE-LIKE protein MJ1331|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PHALNQVST 9
P+ LN++ST
Sbjct: 92 PNGLNKIST 100


>sp|XPB_ARCFU|DNA 3'-5' translocase XPB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ALNQVSTP 10
A+N++STP
Sbjct: 108 AINELSTP 115


>sp|CG121_METJA|REGULATORY protein Cgi121|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HALNQVST 9
HA+NQ T
Sbjct: 38 HAINQAKT 45




22|SequenceR|115|106|LVVEPPHALN

>sp|GATE_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 4 EPPHALN 10
EPPHA+N
Sbjct: 88 EPPHAIN 94


>sp|GATE_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 4 EPPHALN 10
EPPHA+N
Sbjct: 88 EPPHAIN 94


>sp|GATE_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 4 EPPHALN 10
EPPHA+N
Sbjct: 88 EPPHAIN 94


>sp|GATE_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 4 EPPHALN 10
EPPHA+N
Sbjct: 88 EPPHAIN 94


>sp|GATE_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 4 EPPHALN 10
EPPHA+N
Sbjct: 88 EPPHAIN 94


>sp|GATE_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 4 EPPHALN 10
EPPHA+N
Sbjct: 88 EPPHAIN 94


>sp|GATE_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus solfataricus (strain

Query: 4 EPPHALN 10
EPPHA+N
Sbjct: 88 EPPHAIN 94


>sp|SYS_THEVO|SERINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VVEPPHALN 10
VVEPP+ LN
Sbjct: 212 VVEPPYMLN 220


>sp|GATE_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 4 EPPHALN 10
EPPH LN
Sbjct: 87 EPPHGLN 93


>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain

Query: 4 EPPHALN 10
EPPH+LN
Sbjct: 86 EPPHSLN 92


>sp|SYS_THEAC|SERINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VVEPPHALN 10
+VEPP+ LN
Sbjct: 212 IVEPPYMLN 220


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 4 EPPHALN 10
EPPH LN
Sbjct: 86 EPPHPLN 92


>sp|CS3HE_THETK|CRISPR-ASSOCIATED helicase Cas3|Thermoproteus tenax (strain ATCC 35583

Query: 2 VVEPPHAL 9
VVEP HAL
Sbjct: 84 VVEPMHAL 91


>sp|MTAP_AERPE|S-METHYL-5'-THIOADENOSINE phosphorylase|Aeropyrum pernix (strain ATCC 700893

Query: 5 PPHALN 10
PPHA+N
Sbjct: 70 PPHAIN 75


>sp|THSB_HALSA|THERMOSOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 2 VVEPPHA 8
VVEP HA
Sbjct: 497 VVEPAHA 503


>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 4 EPPHALN 10
EPPH L+
Sbjct: 89 EPPHRLD 95


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 4 EPPHALN 10
EPPH L+
Sbjct: 89 EPPHRLD 95


>sp|GATE_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Natronomonas pharaonis (strain ATCC

Query: 4 EPPHALN 10
EPPH L+
Sbjct: 88 EPPHRLD 94


>sp|MTNA_AERPE|PUTATIVE methylthioribose-1-phosphate isomerase|Aeropyrum pernix (strain

Query: 2 VVEPPHALN 10
V+EPP +N
Sbjct: 355 VIEPPFDVN 363


>sp|APGM2_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanothermobacter thermautotrophicus

Query: 3 VEPPH 7
VEPPH
Sbjct: 160 VEPPH 164


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 1 LVVEPPHAL 9
+V +PPH L
Sbjct: 142 MVKKPPHIL 150


>sp|ASPD_METKA|L-ASPARTATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 3 VEPPHALN 10
++PP ALN
Sbjct: 150 IKPPKALN 157


>sp|SYT_META3|THREONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 VEPPH 7
+EPPH
Sbjct: 204 IEPPH 208


>sp|RTCA_HYPBU|RNA 3'-terminal phosphate cyclase|Hyperthermus butylicus (strain DSM

Query: 2 VVEPPHALN 10
V +PPH L
Sbjct: 168 VTQPPHVLK 176


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VVEPPHAL 9
V EP HAL
Sbjct: 633 VYEPAHAL 640


>sp|MFNA_METKA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanopyrus kandleri (strain

Query: 1 LVVEPPH 7
L V+PPH
Sbjct: 303 LAVDPPH 309


>sp|ARLY_METKA|ARGININOSUCCINATE lyase|Methanopyrus kandleri (strain AV19 /

Query: 2 VVEPPHALN 10
VVEPP L+
Sbjct: 266 VVEPPDELS 274




23|SequenceR|120|111|TQFDTLVVEP

>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 3 FDTLVVEP 10
FDT++V+P
Sbjct: 336 FDTVIVDP 343


>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 FDTLVVEP 10
FDT++V+P
Sbjct: 334 FDTVIVDP 341


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 3 FDTLVVEP 10
FDT++V+P
Sbjct: 335 FDTVIVDP 342


>sp|LEU3_HALVD|3-ISOPROPYLMALATE dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 1 TQFDTLV 7
TQFDT+V
Sbjct: 208 TQFDTIV 214


>sp|CPGS_PYRHO|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus horikoshii (strain

Query: 3 FDTLVVE 9
+DTL+VE
Sbjct: 373 YDTLIVE 379


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 3 FDTLVVEP 10
++TL+V+P
Sbjct: 337 YETLIVDP 344


>sp|NFI_PYRAB|ENDONUCLEASE V|Pyrococcus abyssi (strain GE5 /

Query: 2 QFDTLVVE 9
+FD L+VE
Sbjct: 88 EFDVLIVE 95


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi (strain

Query: 3 FDTLVVEP 10
++TL+V+P
Sbjct: 335 YETLIVDP 342


>sp|SYY_HALLT|TYROSINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 QFDTLVVE 9
+FDT+VVE
Sbjct: 269 RFDTVVVE 276




24|SequenceR|125|116|QSGDLTQFDT

>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QSGDLTQFDT 10
+SGD +FDT
Sbjct: 147 ESGDTIEFDT 156


>sp|ENDA_HALVD|TRNA-SPLICING endonuclease|Haloferax volcanii (strain ATCC 29605

Query: 1 QSGDLTQFDT 10
+ GDLT FDT
Sbjct: 145 EDGDLTYFDT 154


>sp|TRET_THELN|TREHALOSE synthase|Thermococcus litoralis (strain ATCC 51850

Query: 4 DLTQFD 9
DLTQFD
Sbjct: 121 DLTQFD 126


>sp|TRET_PYRFU|TREHALOSE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 DLTQFD 9
DLTQFD
Sbjct: 121 DLTQFD 126


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 2 SGDLTQFDT 10
SGD +FDT
Sbjct: 149 SGDKLEFDT 157


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SGDLTQFDT 10
+GD +FDT
Sbjct: 148 TGDTIEFDT 156


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SGDLTQFDT 10
+GD +FDT
Sbjct: 149 TGDTIEFDT 157


>sp|GLMM_METS3|PROBABLE phosphoglucosamine mutase|Methanobrevibacter smithii (strain ATCC

Query: 1 QSGDLTQFDT 10
++GD++ FD+
Sbjct: 249 ENGDISPFDS 258




25|SequenceR|130|121|KVPNYQSGDL

>sp|DNLI2_METMA|DNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KVPNYQSG 8
K PNY SG
Sbjct: 524 KSPNYDSG 531


>sp|DNLI2_METBF|DNA ligase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 KVPNYQSG 8
K PNY SG
Sbjct: 524 KSPNYDSG 531


>sp|DNLI2_METAC|DNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KVPNYQSG 8
K PNY SG
Sbjct: 524 KSPNYDSG 531


>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVPNYQSGDL 10
+VP Y+ GD+
Sbjct: 265 RVPEYKVGDV 274


>sp|DNLI_METMJ|DNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PNYQSG 8
PNY+SG
Sbjct: 503 PNYESG 508


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 KVPNYQSGDL 10
++PN+ SGD+
Sbjct: 422 ELPNHPSGDM 431


>sp|Y797_METJA|UNCHARACTERIZED ABC transporter permease MJ0797|Methanocaldococcus jannaschii

Query: 3 PNYQSG 8
PNYQ+G
Sbjct: 60 PNYQNG 65


>sp|HBCL2_METS5|4-HYDROXYBUTYRATE--COA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 KVPNYQSGD 9
K+PNY+ D
Sbjct: 5 KIPNYEGVD 13


>sp|RL3_NATPD|LARGE ribosomal subunit protein uL3|Natronomonas pharaonis (strain ATCC

Query: 2 VPNYQSGDL 10
VP QSGD+
Sbjct: 116 VPEEQSGDI 124


>sp|DNLI_METTP|DNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KVPNYQSG 8
+ PNY SG
Sbjct: 506 RSPNYSSG 513


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KVPNYQSGDL 10
++PN GDL
Sbjct: 266 RIPNIWKGDL 275


>sp|DNLI_METPE|DNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 KVPNYQSG 8
K P+Y+SG
Sbjct: 504 KSPSYESG 511


>sp|Y094_METJA|UNCHARACTERIZED protein MJ0094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVPNYQSGDL 10
KV NY GD+
Sbjct: 270 KVKNYTLGDI 279


>sp|THI4_METAC|THIAMINE thiazole synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KVPNYQSGDL 10
K+PN + G+L
Sbjct: 182 KIPNAKIGEL 191


>sp|Y040_AERPE|UPF0175 protein APE_0890a.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 KVPNYQSGDL 10
KVP++ GD+
Sbjct: 10 KVPSHYVGDI 19


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 2 VPNYQSGDL 10
+P+++ GDL
Sbjct: 1226 LPHFEKGDL 1234


>sp|EF2_METS3|ELONGATION factor 2|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KVPNYQSGDL 10
+VPN GD+
Sbjct: 266 RVPNIWEGDI 275




26|SequenceR|135|126|RVLQQKVPNY

>sp|RNH2_SULTO|RIBONUCLEASE HII|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RVLQQKVPNY 10
++LQ+ PNY
Sbjct: 194 KILQEIAPNY 203


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 3 LQQKVPNY 10
LQ+++P Y
Sbjct: 237 LQERIPGY 244


>sp|NADA_SACS2|QUINOLINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LQQKVPN 9
+QQKVPN
Sbjct: 157 VQQKVPN 163


>sp|AATC_METJA|A-TYPE ATP synthase subunit C|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RVLQQKVPNY 10
++LQ+++ NY
Sbjct: 206 KILQEELSNY 215


>sp|RNH2_SULAC|RIBONUCLEASE HII|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RVLQQKVPNY 10
++LQ PNY
Sbjct: 195 KILQDIAPNY 204




27|SequenceR|140|131|CSTAYRVLQQ

>sp|Y1584_METJA|UNCHARACTERIZED protein MJ1584|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TAYRVLQQ 10
T YRVL+Q
Sbjct: 95 TLYRVLRQ 102


>sp|TF2B_METKA|TRANSCRIPTION initiation factor IIB|Methanopyrus kandleri (strain AV19 /

Query: 4 AYRVLQQ 10
AYRVLQ+
Sbjct: 199 AYRVLQR 205


>sp|RNH2_THEAC|RIBONUCLEASE HII|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 CSTAYRVLQ 9
CS YR+L
Sbjct: 61 CSVRYRILH 69




28|SequenceR|145|136|PCCSYCSTAY

>sp|IDI2_METJA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CSYCSTAY 10
CSYC+ Y
Sbjct: 19 CSYCNVEY 26


>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CSYCSTAY 10
CS+CS A+
Sbjct: 65 CSFCSAAH 72


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 PCCSYCS 7
P C+YC+
Sbjct: 817 PACAYCA 823


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 3 CSYCSTAY 10
CSYC T +
Sbjct: 154 CSYCCTRF 161


>sp|AMTAB_PYRAB|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 3 CSYCSTAY 10
C+YC+T +
Sbjct: 152 CTYCATRF 159


>sp|THIO_METTM|PROBABLE Thioredoxin|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 PCCSYCSTA 9
P C YC A
Sbjct: 11 PTCPYCPMA 19


>sp|THIO_METTH|PROBABLE Thioredoxin|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PCCSYCSTA 9
P C YC A
Sbjct: 11 PTCPYCPMA 19


>sp|THIO_ARCFU|PROBABLE Thioredoxin|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PCCSYCSTA 9
P C YC A
Sbjct: 10 PTCPYCPKA 18


>sp|PYRI_NATPD|ASPARTATE carbamoyltransferase regulatory chain|Natronomonas pharaonis

Query: 3 CSYCST 8
CSYC T
Sbjct: 135 CSYCGT 140


>sp|AMTAB_ARCFU|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Archaeoglobus

Query: 3 CSYCSTAY 10
CS+C+T +
Sbjct: 147 CSFCATKF 154


>sp|PURA1_METAC|ADENYLOSUCCINATE synthetase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CSYCSTAY 10
C YCS Y
Sbjct: 184 CEYCSNWY 191


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 1 PCCSYCST 8
P C +C+T
Sbjct: 365 PLCKFCNT 372


>sp|Y1595_METJA|UPF0104 membrane protein MJ1595|Methanocaldococcus jannaschii (strain ATCC

Query: 3 CSYCSTAY 10
C YCS Y
Sbjct: 191 CKYCSYNY 198


>sp|AMTAB_PYRHO|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 3 CSYCST 8
C+YC+T
Sbjct: 152 CTYCAT 157


>sp|QUEE_METTH|7-CARBOXY-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 CSYCST 8
CSYC T
Sbjct: 38 CSYCDT 43


>sp|QUEE_PYRAE|7-CARBOXY-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 CSYCSTAY 10
C YC T Y
Sbjct: 39 CIYCDTKY 46


>sp|GATA_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Halobacterium salinarum (strain ATCC

Query: 1 PCCSYCSTAY 10
P C Y AY
Sbjct: 249 PSCEYAVAAY 258


>sp|MVHD_METTH|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 2 CCSYCS 7
CC++CS
Sbjct: 12 CCNWCS 17


>sp|MVHD_METTM|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 2 CCSYCS 7
CC++CS
Sbjct: 12 CCNWCS 17


>sp|IF2G_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 1 PCCSYC 6
P C YC
Sbjct: 71 PVCPYC 76


>sp|IF2G_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 PCCSYC 6
P C YC
Sbjct: 71 PVCPYC 76


>sp|IF2G_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 PCCSYC 6
P C YC
Sbjct: 71 PVCPYC 76


>sp|QUEE_THEAC|7-CARBOXY-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 CSYCSTAY 10
C +C T Y
Sbjct: 33 CEWCDTKY 40


>sp|MTRE_METBU|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcoides burtonii (strain DSM

Query: 4 SYCSTAY 10
+YC TAY
Sbjct: 102 TYCITAY 108


>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 1 PCCSYC 6
P C YC
Sbjct: 71 PICPYC 76


>sp|IF2G_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC

Query: 1 PCCSYC 6
P C YC
Sbjct: 71 PICPYC 76


>sp|RIBL_ARCPA|FAD synthase|Archaeoglobus profundus (strain DSM 5631

Query: 3 CSYCST 8
C YCS+
Sbjct: 122 CEYCSS 127


>sp|QUEE_HYPBU|7-CARBOXY-7-DEAZAGUANINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 3 CSYCSTAY 10
C +C T Y
Sbjct: 48 CPFCDTRY 55


>sp|PRIS_NITMS|DNA primase small subunit PriS|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PCCSYCSTAY 10
P YCS AY
Sbjct: 65 PSDVYCSNAY 74


>sp|TTUA_PYRHO|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PCCSYC 6
P CSYC
Sbjct: 126 PPCSYC 131


>sp|PYRI_SULAC|ASPARTATE carbamoyltransferase regulatory chain|Sulfolobus acidocaldarius

Query: 3 CSYCST 8
C YC T
Sbjct: 142 CEYCET 147


>sp|PYRI_METS5|ASPARTATE carbamoyltransferase regulatory chain|Metallosphaera sedula (strain

Query: 3 CSYCST 8
C YC T
Sbjct: 140 CEYCET 145


>sp|PYRI_HALMA|ASPARTATE carbamoyltransferase regulatory chain|Haloarcula marismortui

Query: 3 CSYCST 8
C YC T
Sbjct: 137 CEYCDT 142


>sp|PYRI_CALMQ|ASPARTATE carbamoyltransferase regulatory chain|Caldivirga maquilingensis

Query: 3 CSYCST 8
C YC T
Sbjct: 143 CQYCGT 148




29|SequenceR|150|141|VSALRPCCSY

>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 3 ALRPCCSY 10
A+RP C Y
Sbjct: 452 AMRPFCGY 459


>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 ALRPCCSY 10
A+RP C Y
Sbjct: 452 AMRPFCGY 459


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain

Query: 1 VSALRPCCS 9
+ ++PCC+
Sbjct: 19 IEKIKPCCA 27


>sp|HIS6_IGNH4|IMIDAZOLE glycerol phosphate synthase subunit|Ignicoccus hospitalis (strain

Query: 4 LRPCC 8
+RPCC
Sbjct: 250 VRPCC 254




30|SequenceR|155|146|DSYLLVSALR

>sp|CAS6B_METJA|CRISPR-ASSOCIATED endoribonuclease Cas6 2|Methanocaldococcus jannaschii (strain

Query: 1 DSYLLVSALR 10
D YLL+S+ R
Sbjct: 64 DKYLLISSPR 73


>sp|TRMY_AERPE|TRNA (pseudouridine(54)-N(1))-methyltransferase|Aeropyrum pernix (strain

Query: 3 YLLVSALR 10
+LLVSALR
Sbjct: 174 FLLVSALR 181


>sp|CMR3_PYRFU|CRISPR system Cmr subunit Cmr3|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DSYLLVSA 8
D YLLVS+
Sbjct: 254 DDYLLVSS 261




31|SequenceR|160|151|EGIGYDSYLL

>sp|Y1289_METJA|UNCHARACTERIZED protein MJ1289|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGIGYDSYL 9
EGI YD YL
Sbjct: 95 EGIDYDVYL 103


>sp|Y614_PYRHO|UNCHARACTERIZED protein PH0614|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EGIGYDSY 8
EG+GY++Y
Sbjct: 198 EGMGYETY 205


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GIGYDSYLL 10
G G+D YLL
Sbjct: 327 GHGWDDYLL 335


>sp|MEND_NATPD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 GYDSYL 9
GYD+YL
Sbjct: 292 GYDAYL 297


>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IGYDSYL 9
IGYD Y+
Sbjct: 166 IGYDPYI 172


>sp|Y2231_ARCFU|UPF0104 membrane protein AF_2231|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GIGYDSYLL 10
+GYD+Y L
Sbjct: 240 ALGYDAYFL 248


>sp|Y2328_HALVD|UNCHARACTERIZED isochorismatase family protein HVO_2328|Haloferax volcanii (strain

Query: 1 EGIGYDSYL 9
E +G+D YL
Sbjct: 132 ENLGFDVYL 140


>sp|GLMS_HALSA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Halobacterium salinarum (strain ATCC

Query: 4 GYDSYLL 10
GYD Y+L
Sbjct: 243 GYDHYML 249


>sp|DPOL2_METTH|DNA polymerase PolB subunit 2|Methanothermobacter thermautotrophicus

Query: 1 EGIGYD 6
EG+GYD
Sbjct: 175 EGMGYD 180


>sp|MEND_HALWD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 GYDSYL 9
GYD YL
Sbjct: 280 GYDGYL 285


>sp|MEND_HALMA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 GYDSYL 9
GYD YL
Sbjct: 289 GYDGYL 294


>sp|RIBL_METTP|FAD synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 IGYDSYL 9
+GYD Y+
Sbjct: 93 LGYDQYM 99


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GIGYDSY 8
GI YD+Y
Sbjct: 84 GISYDNY 90


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 3 IGYDSYLL 10
+G DSY+L
Sbjct: 366 VGVDSYVL 373


>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 1 EGIGYDSYL 9
EGI YD L
Sbjct: 302 EGINYDEVL 310


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GIGYDSYLL 10
G G+D YL+
Sbjct: 327 GHGWDDYLI 335


>sp|ARSM_METAC|ARSENITE methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GIGYDSYL 9
G G+DS+L
Sbjct: 83 GAGFDSFL 90


>sp|PUR5_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EGIGYDSYLL 10
+G+GYD Y L
Sbjct: 254 KGVGYDIYDL 263


>sp|Y1402_METJA|UNCHARACTERIZED protein MJ1402|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GIGYDSYLL 10
G YD+YLL
Sbjct: 147 GQNYDAYLL 155




32|SequenceR|165|156|PEVPVEGIGY

>sp|SYFA_ARCFU|PHENYLALANINE--TRNA ligase alpha subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PEVPVEGIGY 10
PEV VEG+G+
Sbjct: 403 PEVYVEGLGW 412


>sp|SYFA_METHJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PEVPVEGIGY 10
PEV +EG+G+
Sbjct: 404 PEVYIEGLGW 413


>sp|SYFA_METBF|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 PEVPVEGIGY 10
PEV V+G+G+
Sbjct: 421 PEVYVDGLGW 430


>sp|TRUD1_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain

Query: 2 EVPVEGIGY 10
EVP + IGY
Sbjct: 50 EVPTKEIGY 58


>sp|MCRY_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 PEVPVEGIGY 10
P V +EG+GY
Sbjct: 181 PPVLLEGLGY 190


>sp|MCRY_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 PEVPVEGIGY 10
P V +EG+GY
Sbjct: 181 PPVLLEGLGY 190


>sp|SYFA_METMA|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PEVPVEGIGY 10
PEV V+G+G+
Sbjct: 424 PEVYVDGLGW 433


>sp|MCRY_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 PEVPVEGIGY 10
P V +EG+GY
Sbjct: 181 PPVLLEGLGY 190


>sp|KCY_NATPD|CYTIDYLATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EVPVEGIGY 10
+ PVEG+ Y
Sbjct: 182 QTPVEGVTY 190


>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PEVPVEGIGY 10
PEV V+G+G+
Sbjct: 408 PEVYVDGLGW 417


>sp|SYFA_METAC|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PEVPVEGIGY 10
PEV V+G+G+
Sbjct: 421 PEVYVDGLGW 430


>sp|GLPK_PYRFU|GLYCEROL kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PEVPVEG 7
PE+PV G
Sbjct: 227 PEIPVSG 233


>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 1 PEVPVEGI 8
PEVP+E I
Sbjct: 407 PEVPLENI 414


>sp|MUTS2_PYRFU|DNA-BINDING protein MutS2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PEVPVEGIGY 10
PE+ EGIG+
Sbjct: 333 PEIVEEGIGF 342


>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 PEVPVEGIGY 10
PEV V+G+G+
Sbjct: 403 PEVWVDGLGW 412


>sp|RS19_METLZ|SMALL ribosomal subunit protein uS19|Methanocorpusculum labreanum (strain

Query: 2 EVPVEGI 8
E+PVEG+
Sbjct: 97 EIPVEGV 103


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PEVPVE 6
PE+PVE
Sbjct: 397 PEIPVE 402


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 2 EVPVEGI 8
E+PVEGI
Sbjct: 391 EIPVEGI 397


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 2 EVPVEGI 8
EVP+EGI
Sbjct: 36 EVPIEGI 42


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 PVEGIGY 10
PV+G GY
Sbjct: 346 PVDGAGY 352


>sp|DCUP_PICTO|UROPORPHYRINOGEN decarboxylase|Picrophilus torridus (strain ATCC 700027

Query: 1 PEVPVEGIGY 10
PE PVE + +
Sbjct: 312 PETPVENLKH 321


Query: 3 VPVEGIGY 10
+P+E +GY
Sbjct: 74 IPLEALGY 81


>sp|GLNA_THEKO|GLUTAMINE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EVPVEGIG 9
E+P EGIG
Sbjct: 79 EIPWEGIG 86


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain DSM

Query: 1 PEVPVEGIGY 10
PE+ E +GY
Sbjct: 206 PEIVTERVGY 215


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PEVPVEGIGY 10
P V +EG+GY
Sbjct: 181 PPVLLEGLGY 190


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 3 VPVEGIGY 10
V VEGIG+
Sbjct: 115 VTVEGIGF 122


>sp|Y1016_ARCFU|UNCHARACTERIZED protein AF_1016|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EVPVEGIGY 10
E+P+EGI Y
Sbjct: 15 EMPLEGIVY 23


>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EVPVEGI 8
+VPVEGI
Sbjct: 227 DVPVEGI 233


>sp|AATB3_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 5 VEGIGY 10
VEGIGY
Sbjct: 25 VEGIGY 30


>sp|RTCA_PYRAE|RNA 3'-terminal phosphate cyclase|Pyrobaculum aerophilum (strain ATCC

Query: 3 VPVEGIGY 10
+ VEG+GY
Sbjct: 339 IEVEGVGY 346


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 3 VPVEGIGY 10
P+EGI Y
Sbjct: 119 APLEGIAY 126




33|SequenceR|170|161|LPVDLPEVPV

>sp|RL18_METTH|LARGE ribosomal subunit protein uL18|Methanothermobacter

Query: 2 PVDLPE 7
PVDLPE
Sbjct: 174 PVDLPE 179


>sp|RPO1N_HALMO|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halococcus morrhuae (Micrococcus

Query: 2 PVDLPEV 8
P+D+PEV
Sbjct: 340 PIDVPEV 346


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 1 LPVDLPEV 8
LP+D+P+V
Sbjct: 435 LPLDVPQV 442


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPVDLPEV 8
LP D+PE+
Sbjct: 343 LPYDVPEI 350


>sp|PCNA_PYRAB|DNA polymerase sliding clamp|Pyrococcus abyssi (strain GE5 /

Query: 1 LPVDLPEVP 9
+ VDLPE+P
Sbjct: 121 IEVDLPELP 129


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPVDLPEVPV 10
L VD+P++PV
Sbjct: 531 LGVDVPQLPV 540


>sp|PCNA_PYRFU|DNA polymerase sliding clamp|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LPVDLPEVP 9
+ VDLPE+P
Sbjct: 121 MEVDLPELP 129


>sp|NASC_HALMT|PROBABLE molybdenum cofactor guanylyltransferase|Haloferax mediterranei

Query: 1 LPVDLPEVP 9
LP D+P VP
Sbjct: 108 LPCDMPLVP 116


>sp|COFC_HALWD|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PVDLPEV 8
P DLPEV
Sbjct: 270 PTDLPEV 276


>sp|MRE11_THEVO|DNA double-strand break repair protein|Thermoplasma volcanium (strain

Query: 3 VDLPEVP 9
VD+P VP
Sbjct: 319 VDMPNVP 325


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LPVDLPEVPV 10
L VD+P++PV
Sbjct: 533 LGVDIPDLPV 542


>sp|DNAG_METLZ|DNA primase DnaG|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LPVDLPEVP 9
+P DLPE P
Sbjct: 310 VPADLPEEP 318


>sp|VORA_METTH|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter thermautotrophicus

Query: 2 PVDLPEVP 9
PVD PE P
Sbjct: 288 PVDDPEFP 295


>sp|HMDH_METTH|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 VDLPEVPV 10
V+LP+VP+
Sbjct: 326 VNLPDVPL 333


>sp|HMDH_METJA|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VDLPEVPV 10
V LP+VP+
Sbjct: 335 VTLPDVPI 342


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPVDLPEVPV 10
LP+D+P V +
Sbjct: 4 LPMDIPRVVI 13


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 DLPEVPV 10
D+P+VPV
Sbjct: 400 DVPQVPV 406


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PVDLPEVP 9
P D+PE+P
Sbjct: 364 PSDIPEIP 371


>sp|COFC_METHJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PVDLPEVPV 10
PV+L +VPV
Sbjct: 63 PVELDDVPV 71


>sp|Y414_ARCFU|UNCHARACTERIZED protein AF_0414|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PVDLPEVPV 10
PVD PE+ V
Sbjct: 25 PVDKPEIAV 33


>sp|Y1633_METJA|UNCHARACTERIZED protein MJ1633|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPVDLPEVPV 10
LP++LP + +
Sbjct: 246 LPIELPNIDI 255


>sp|MFNB_ARCFU|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PVDLPE 7
P+DLPE
Sbjct: 134 PLDLPE 139


>sp|EF1A_METS3|ELONGATION factor 1-alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 PVDLPEVPV 10
P D+P +PV
Sbjct: 166 PADVPFIPV 174


>sp|IF6_METAR|TRANSLATION initiation factor 6|Methanocella arvoryzae (strain DSM 22066

Query: 1 LPVDLPEVPV 10
LP DLP+ V
Sbjct: 26 LPPDLPQATV 35


>sp|EF1A_NANEQ|ELONGATION factor 1-alpha|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LPVDLP 6
LPVDLP
Sbjct: 220 LPVDLP 225


>sp|Y512_METJA|UNCHARACTERIZED protein MJ0512|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PVDLPEVP 9
P ++PE+P
Sbjct: 89 PREIPEIP 96




34|SequenceR|175|166|RITSPLPVDL

>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 ITSPLPVD 9
I+ PLPVD
Sbjct: 534 ISEPLPVD 541


>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RITSPLP 7
RITSP P
Sbjct: 298 RITSPTP 304


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ITSPLPVDL 10
++SPLPV+
Sbjct: 590 LSSPLPVEF 598


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 RITSPLPVDL 10
RI +PLP D+
Sbjct: 500 RIVNPLPEDM 509


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TSPLPVDL 10
T+PLP+ L
Sbjct: 385 TTPLPIHL 392


>sp|ASSY_METVA|ARGININOSUCCINATE synthase|Methanococcus vannielii

Query: 5 PLPVDL 10
P+PVDL
Sbjct: 165 PIPVDL 170


>sp|GCH3_SULTO|GTP cyclohydrolase III|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 SPLPVDL 10
SP+P+D+
Sbjct: 79 SPVPIDI 85


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 ITSPLPVDL 10
+ PLP DL
Sbjct: 292 VLGPLPTDL 300


>sp|KPRS_HALSA|RIBOSE-PHOSPHATE pyrophosphokinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RITSPLPVDL 10
++ +PLP DL
Sbjct: 143 QLAAPLPADL 152


>sp|KPRS_HALS3|RIBOSE-PHOSPHATE pyrophosphokinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RITSPLPVDL 10
++ +PLP DL
Sbjct: 143 QLAAPLPADL 152


>sp|HIS8_THEKO|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RITSPLPVDL 10
RI SP VD+
Sbjct: 228 RIKSPFSVDI 237


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 SPLPVDL 10
SPLP+D+
Sbjct: 100 SPLPLDV 106


>sp|RRP42_PYRAE|EXOSOME complex component Rrp42|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 SPLPVDL 10
+PLPVD+
Sbjct: 189 APLPVDI 195


>sp|DGGGP_METS5|DIGERANYLGERANYLGLYCERYL phosphate synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 RITSPLPVDL 10
+TSPLP+ L
Sbjct: 212 EVTSPLPLFL 221


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 ITSPLPVDL 10
+ PLP+D+
Sbjct: 292 VLGPLPIDV 300


>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 ITSPLPVDL 10
+ PLP+D+
Sbjct: 292 VLGPLPIDV 300


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 ITSPLPVDL 10
+ PLP+D+
Sbjct: 292 VLGPLPIDV 300


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ITSPLPVDL 10
+ PLP+D+
Sbjct: 292 VLGPLPIDV 300


>sp|THIC1_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ITSPLPVDL 10
+ PLP+D+
Sbjct: 292 VLGPLPIDV 300


>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ITSPLPVDL 10
+ PLP+D+
Sbjct: 292 VLGPLPIDV 300


>sp|THIC_SACI4|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 ITSPLPVDL 10
+ PLP+D+
Sbjct: 292 VLGPLPIDV 300


>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RITSPLPVDL 10
R +PLP+D+
Sbjct: 96 RAETPLPLDV 105


>sp|ARCC_HALSA|CARBAMATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ITSPLPVDL 10
+ SP PVD+
Sbjct: 155 VPSPKPVDI 163




35|SequenceR|180|171|VPSAPRITSP

>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 APRITSP 10
AP++TSP
Sbjct: 226 APKLTSP 232


>sp|QUEC_METKA|7-CYANO-7-DEAZAGUANINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 VPSAPRITSP 10
+PS PR+ SP
Sbjct: 155 LPSRPRLHSP 164


>sp|PUR2_METB6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoregula boonei (strain DSM 21154

Query: 2 PSAPRITSP 10
PSAP+ SP
Sbjct: 339 PSAPKTNSP 347


>sp|Y1774_METTH|PROBABLE metallophosphoesterase MTH_1774|Methanothermobacter

Query: 2 PSAPRITSP 10
P+ PR+T P
Sbjct: 133 PTVPRLTDP 141


>sp|HPCAS_METS5|3-HYDROXYPROPIONYL-COENZYME A synthetase|Metallosphaera sedula (strain ATCC 51363

Query: 2 PSAPRI 7
PSAPR+
Sbjct: 462 PSAPRV 467




36|SequenceR|185|176|KPSGAVPSAP

>sp|TRUA_PYRCJ|TRNA pseudouridine synthase A|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 GAVPSAP 10
GAVPSAP
Sbjct: 195 GAVPSAP 201


>sp|TRUA_PYRAE|TRNA pseudouridine synthase A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 GAVPSAP 10
GAVPSAP
Sbjct: 195 GAVPSAP 201


>sp|TRUA_PYRAR|TRNA pseudouridine synthase A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 GAVPSAP 10
GAVPSAP
Sbjct: 195 GAVPSAP 201


>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 KPSGAVPSAP 10
+PS A+P++P
Sbjct: 263 EPSVAIPNSP 272


>sp|TRUA_PYRNV|TRNA pseudouridine synthase A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 GAVPSAP 10
GAVPSAP
Sbjct: 194 GAVPSAP 200


>sp|TRUA_PYRIL|TRNA pseudouridine synthase A|Pyrobaculum islandicum (strain DSM 4184

Query: 4 GAVPSAP 10
G VPSAP
Sbjct: 194 GVVPSAP 200


>sp|SURE_METAR|5'-NUCLEOTIDASE SurE|Methanocella arvoryzae (strain DSM 22066

Query: 2 PSGAVPSAP 10
P+GA P P
Sbjct: 180 PAGATPETP 188




37|SequenceR|190|181|GRVPQKPSGA

>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 1 GRVPQKP 7
G++PQKP
Sbjct: 194 GKIPQKP 200


>sp|ASORS_PYRFU|ALIPHATIC sulfonate oxidoreductase, polyferredoxin-like subunit|Pyrococcus

Query: 1 GRVPQKPSG 9
G+VP+ P+G
Sbjct: 103 GKVPRIPAG 111


>sp|Y224_METKA|UPF0284 protein MK0224|Methanopyrus kandleri (strain AV19 /

Query: 2 RVPQKPSGA 10
VPQ P GA
Sbjct: 90 EVPQNPVGA 98


>sp|EF1A_METBF|ELONGATION factor 1-alpha|Methanosarcina barkeri (strain Fusaro /

Query: 2 RVPQKPS 8
+VP+KPS
Sbjct: 215 KVPEKPS 221


>sp|SYFB_AERPE|PHENYLALANINE--TRNA ligase beta subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 RVPQKP 7
RVPQ+P
Sbjct: 88 RVPQRP 93




38|SequenceR|195|186|AGRYYGRVPQ

>sp|GLMM_METVS|PHOSPHOGLUCOSAMINE mutase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GRYYGRVPQ 10
GR+ GR+P+
Sbjct: 194 GRFVGRMPE 202


>sp|GLMM_METMP|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GRYYGRVPQ 10
GR+ GR+P+
Sbjct: 194 GRFVGRMPE 202


>sp|GLMM_METM7|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C7 /

Query: 2 GRYYGRVPQ 10
GR+ GR+P+
Sbjct: 194 GRFVGRMPE 202


>sp|GLMM_METM5|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C5 /

Query: 2 GRYYGRVPQ 10
GR+ GR+P+
Sbjct: 194 GRFVGRMPE 202


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GRYYGRVPQ 10
GR+ GR+P+
Sbjct: 195 GRFIGRLPE 203


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GRYYGRVPQ 10
G Y+GR+P+
Sbjct: 135 GYYHGRIPK 143


>sp|FDHD_METJA|PROTEIN FdhD|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RYYGRVP 9
RY GR+P
Sbjct: 165 RYSGRIP 171


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 3 RYYGRVP 9
+Y+GR+P
Sbjct: 724 KYFGRMP 730


>sp|DNLI1_METBF|DNA ligase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 GRYYGR 7
G+YYGR
Sbjct: 412 GKYYGR 417


>sp|SYS_PICTO|SERINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 RYYGR 7
RYYGR
Sbjct: 125 RYYGR 129


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AGRYYGRVP 9
A YYG VP
Sbjct: 256 AQEYYGVVP 264


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 AGRYYGRVP 9
A RY G++P
Sbjct: 399 ASRYSGQIP 407


>sp|CBIA_HALSA|COBYRINATE a,c-diamide synthase|Halobacterium salinarum (strain ATCC 700922

Query: 4 YYGRVP 9
Y+GRVP
Sbjct: 177 YFGRVP 182


>sp|NCPP_PYRIL|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum islandicum (strain

Query: 1 AGRYYGRV 8
A RY+GRV
Sbjct: 126 AERYFGRV 133


>sp|TSGAD_HALVD|PUTATIVE ABC transporter glucose-binding protein|Haloferax volcanii (strain

Query: 2 GRYYGRV 8
GRY GR+
Sbjct: 170 GRYMGRI 176


>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 3 RYYGRVPQ 10
R YG++P+
Sbjct: 125 RVYGKIPE 132


>sp|CBIA_HALMA|COBYRINATE a,c-diamide synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 YYGRVP 9
Y+GR+P
Sbjct: 168 YFGRIP 173


>sp|MIG_AERPE|THYMINE-DNA glycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GRYYGRVP 9
RY GR+P
Sbjct: 105 ARYGGRIP 112


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GRYYGR 7
G YYGR
Sbjct: 444 GSYYGR 449




39|SequenceR|200|191|FTGGVAGRYY

>sp|Y551_METJA|UNCHARACTERIZED protein MJ0551|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FTGGVAGRYY 10
F GG GR Y
Sbjct: 211 FVGGKGGRIY 220


>sp|PYRDB_SACS2|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Saccharolobus solfataricus

Query: 2 TGGVAGR 8
TGGV+GR
Sbjct: 198 TGGVSGR 204


>sp|MBLFP_SULTO|METALLO-BETA-LACTAMASE fold-containing protein ST1585|Sulfurisphaera tokodaii (strain DSM

Query: 1 FTGGVAGRYY 10
FTG AG Y+
Sbjct: 162 FTGDSAGAYF 171


>sp|RL4_METJA|LARGE ribosomal subunit protein uL4|Methanocaldococcus jannaschii (strain

Query: 3 GGVAGR 8
GGVAGR
Sbjct: 230 GGVAGR 235


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 5 VAGRYY 10
V+GRYY
Sbjct: 184 VSGRYY 189


>sp|GPMI_HALWD|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 VAGRYY 10
V+GRYY
Sbjct: 178 VSGRYY 183


>sp|RIFK_ARCFU|RIBOFLAVIN kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FTGGVAGRYY 10
F+G GRYY
Sbjct: 112 FSGVGEGRYY 121


>sp|Y3125_METAC|UPF0228 protein MA_3125|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TGGVAGRYY 10
TG V +YY
Sbjct: 75 TGSVGNKYY 83


>sp|GPMI_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 5 VAGRYY 10
V+GRYY
Sbjct: 184 VSGRYY 189


>sp|Y483_ARCFU|UNCHARACTERIZED protein AF_0483|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GGVAGRYY 10
GG G+YY
Sbjct: 20 GGYTGKYY 27


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 5 VAGRYY 10
V+GRYY
Sbjct: 184 VSGRYY 189


>sp|PELO_PYRCJ|PROTEIN pelota homolog|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 TGGVAGRY 9
+GGVAG Y
Sbjct: 219 SGGVAGVY 226


>sp|RIBA_ARCFU|GTP cyclohydrolase-2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GGVAGRYY 10
GGVAG Y
Sbjct: 149 GGVAGEDY 156


>sp|Y1187_METJA|UNCHARACTERIZED protein MJ1187|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GGVAGRYY 10
G +AG YY
Sbjct: 262 GAMAGAYY 269


>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FTGGVAGRYY 10
FT + G YY
Sbjct: 171 FTASLQGTYY 180




40|SequenceR|205|196|NHLRDFTGGV

>sp|ADEC_META3|ADENINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NHLRDFTGG 9
NHL+D GG
Sbjct: 504 NHLKDMGGG 512


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC

Query: 2 HLRDFTGGV 10
HL D+ GG+
Sbjct: 33 HLSDYDGGI 41


>sp|Y1464_METJA|UNCHARACTERIZED GTP-binding protein MJ1464|Methanocaldococcus jannaschii (strain

Query: 2 HLRDFTG 8
HL+DF G
Sbjct: 297 HLKDFDG 303


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 HLRDFTGG 9
HLR + GG
Sbjct: 46 HLRTYVGG 53


>sp|PDXT_METB6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanoregula boonei (strain

Query: 3 LRDFTGGV 10
+RDF GG+
Sbjct: 72 IRDFKGGI 79


>sp|END4_METLZ|PROBABLE endonuclease 4|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 HLRDFTGGV 10
HL D GGV
Sbjct: 215 HLNDMKGGV 223


>sp|RS13_PICTO|SMALL ribosomal subunit protein uS13|Picrophilus torridus (strain ATCC

Query: 1 NHLRDFTGG 9
NH RD T G
Sbjct: 87 NHRRDITTG 95


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NHLRDFTG 8
++LRDF G
Sbjct: 53 HYLRDFAG 60


>sp|TRPB1_METAC|TRYPTOPHAN synthase beta chain 1|Methanosarcina acetivorans (strain ATCC

Query: 1 NHLRDFTG 8
++LRDF G
Sbjct: 53 HYLRDFAG 60


>sp|RIBB_METJA|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NHLRDFTG 8
NH + FTG
Sbjct: 106 NHRKTFTG 113


>sp|RL21_PYRAR|LARGE ribosomal subunit protein eL21|Pyrobaculum arsenaticum (strain

Query: 2 HLRDFTGG 9
HL+ F GG
Sbjct: 92 HLKPFQGG 99


>sp|RIBB_METTH|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 NHLRDFTG 8
NH + FTG
Sbjct: 109 NHRKTFTG 116




41|SequenceR|210|201|LVKHANHLRD

>sp|PYRH_METMA|URIDYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LVKHANHLRD 10
+K+AN LRD
Sbjct: 21 FLKYANALRD 30


>sp|GLCDH_THEAC|GLUCOSE 1-dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VKHANHLRD 10
VK AN+L+D
Sbjct: 233 VKFANYLKD 241


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VKHANHLR 9
V HA HLR
Sbjct: 56 VLHAGHLR 63


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 VKHANHLR 9
V HA HLR
Sbjct: 56 VLHAGHLR 63


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VKHANHLR 9
V HA HLR
Sbjct: 46 VLHAGHLR 53


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 VKHANHLR 9
V HA HLR
Sbjct: 56 VLHAGHLR 63


>sp|PYRH_METAC|URIDYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LVKHANHLRD 10
+K+AN LRD
Sbjct: 21 FLKYANVLRD 30


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VKHANHLR 9
V HA HLR
Sbjct: 53 VLHAGHLR 60


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VKHANHLR 9
V HA HLR
Sbjct: 51 VLHAGHLR 58


>sp|Y541_PYRHO|UNCHARACTERIZED ATP-binding protein PH0541|Pyrococcus horikoshii (strain ATCC

Query: 3 KHANHLRD 10
KH HLR+
Sbjct: 240 KHRKHLRE 247


>sp|PGK_PYRAB|PHOSPHOGLYCERATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 LVKHANHLRD 10
LVKHA + D
Sbjct: 254 LVKHAEKILD 263


>sp|RECJ1_METJA|EXONUCLEASE RecJ1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LVKHANHLRD 10
L KH N+LR+
Sbjct: 341 LRKHRNNLRE 350


>sp|MDH_METTH|MALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 ANHLRD 10
ANH+RD
Sbjct: 305 ANHVRD 310


>sp|FEN_PICTO|FLAP endonuclease 1|Picrophilus torridus (strain ATCC 700027

Query: 1 LVKHANHLRD 10
L+KH L+D
Sbjct: 9 LIKHETSLKD 18




42|SequenceR|215|206|CAVSLLVKHA

>sp|THIC_METPE|PHOSPHOMETHYLPYRIMIDINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 CAVSLLVKH 9
CA+ ++ KH
Sbjct: 413 CAIKIVAKH 421




43|SequenceR|220|211|EQALICAVSL

>sp|TRPF_METAR|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanocella arvoryzae (strain DSM 22066

Query: 1 EQALICAVS 9
E AL CAVS
Sbjct: 13 EDALACAVS 21




44|SequenceR|225|216|GVVLQEQALI

***** No hits found ******


45|SequenceR|230|221|DKDAVGVVLQ

>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 1 DKDAVGVVL 9
DKDA GV+L
Sbjct: 138 DKDAYGVIL 146


>sp|IF2P_METTP|PROBABLE translation initiation factor IF-2|Methanothrix thermoacetophila

Query: 1 DKDAVGVVLQ 10
D D VGV+L+
Sbjct: 361 DTDTVGVILK 370


>sp|Y1365_METJA|UNCHARACTERIZED protein MJ1365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKDAVGVV 8
DKD VG++
Sbjct: 347 DKDLVGII 354


>sp|RIFK_PYRIL|RIBOFLAVIN kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KDAVGVVLQ 10
KD +G+VL+
Sbjct: 63 KDTLGIVLK 71


>sp|IPYR_HALVD|INORGANIC pyrophosphatase|Haloferax volcanii (strain ATCC 29605

Query: 1 DKDAVGVVL 9
DKD GVVL
Sbjct: 35 DKDIPGVVL 43




46|SequenceR|235|226|KSKLLDKDAV

>sp|RLMH_METMP|PUTATIVE ribosomal RNA large subunit|Methanococcus maripaludis (strain DSM

Query: 1 KSKLLDKDA 9
KSK+L+K+A
Sbjct: 52 KSKILEKEA 60


>sp|F16PA_NATPD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KSKLLDKDAV 10
+++LLD DAV
Sbjct: 52 EARLLDVDAV 61




47|SequenceR|240|231|LEPLLKSKLL

>sp|Y875_PYRAE|PROTEIN PAE0875|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LEPLLKSK 8
+EPLLKS+
Sbjct: 166 VEPLLKSR 173


>sp|Y062_PYRCJ|PROTEIN Pcal_0062|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LEPLLKSK 8
+EPLLKS+
Sbjct: 165 VEPLLKSR 172


>sp|Y096_PYRAR|PROTEIN Pars_0096|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LEPLLKSK 8
+EPLLKS+
Sbjct: 167 VEPLLKSR 174




48|SequenceR|245|236|TYPQLLEPLL

>sp|MVK_PYRAB|MEVALONATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 PQLLEPLL 10
P+L+EP+L
Sbjct: 215 PELIEPIL 222


>sp|MVK_PYRHO|MEVALONATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PQLLEPLL 10
P+L+EP+L
Sbjct: 215 PELVEPIL 222


>sp|MVK_THEGJ|MEVALONATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 PQLLEPLL 10
P+++EP+L
Sbjct: 214 PEIIEPIL 221


>sp|NITR_PYRAB|NITRILASE abyssi (strain GE5 /

Query: 3 PQLLEP 8
PQ+LEP
Sbjct: 11 PQILEP 16


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 PQLLEP 8
PQ+LEP
Sbjct: 503 PQMLEP 508


>sp|TRPD_THEKO|ANTHRANILATE phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 PQLLEPL 9
P+LLEP+
Sbjct: 190 PELLEPV 196


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PQLLEPLL 10
P LLEPL+
Sbjct: 628 PTLLEPLM 635


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 PQLLEPLL 10
P LLEPL+
Sbjct: 628 PTLLEPLV 635




49|SequenceR|250|241|HEVRETYPQL

>sp|PSB2_SULTO|PROTEASOME subunit beta 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HEVRETYPQ 9
HE +E YPQ
Sbjct: 196 HEEKEYYPQ 204


>sp|AOCD_METMP|ORNITHINE cyclodeaminase|Methanococcus maripaludis (strain DSM 14266

Query: 1 HEVRETYPQ 9
HE+RE Y +
Sbjct: 194 HEIREEYKK 202


>sp|KTHY_METS5|PROBABLE thymidylate kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 HEVRETYPQL 10
H+VRE Y L
Sbjct: 146 HQVRENYLSL 155


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 2 EVRETYPQL 10
EV ET+P+L
Sbjct: 272 EVLETFPKL 280


>sp|RL14_METB6|LARGE ribosomal subunit protein uL14|Methanoregula boonei (strain DSM

Query: 2 EVRETYPQL 10
EV E YP+L
Sbjct: 116 EVAERYPKL 124


>sp|Y973_METJA|UNCHARACTERIZED protein MJ0973|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VRETYPQL 10
V+E YP+L
Sbjct: 359 VKELYPEL 366


>sp|PELO_THEON|PROTEIN pelota homolog|Thermococcus onnurineus (strain NA1)

Query: 3 VRETYPQL 10
+RE YP+L
Sbjct: 218 LRENYPEL 225


>sp|PELO_THEGJ|PROTEIN pelota homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 3 VRETYPQL 10
+RE YP+L
Sbjct: 218 LRENYPEL 225


>sp|FTHS_THEAC|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HEVRETY 7
HE++ TY
Sbjct: 413 HEIKRTY 419


>sp|Y164_METJA|UNCHARACTERIZED protein MJ0164|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HEVRETYPQL 10
H + E YPQ+
Sbjct: 230 HVILELYPQM 239


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 2 EVRETYP 8
E++ETYP
Sbjct: 364 ELQETYP 370


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 VRETYPQL 10
+++TYP+L
Sbjct: 392 LKDTYPEL 399


>sp|AATC_METAC|A-TYPE ATP synthase subunit C|Methanosarcina acetivorans (strain ATCC

Query: 4 RETYPQL 10
+ETYP+L
Sbjct: 43 KETYPRL 49


>sp|ORNAT_THEKO|ORNITHINE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EVRETYPQL 10
E +E YP+L
Sbjct: 385 ETKEKYPEL 393


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 2 EVRETYPQ 9
+++ETYP+
Sbjct: 64 KIQETYPE 71


>sp|CSD_AERPE|PROBABLE cysteine desulfurase|Aeropyrum pernix (strain ATCC 700893

Query: 1 HEVRETYPQL 10
+EVR +P+L
Sbjct: 7 YEVRSEFPEL 16


>sp|Y834_METJA|UNCHARACTERIZED protein MJ0834|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HEVRETYPQL 10
H++ +TYP++
Sbjct: 56 HDLPKTYPKM 65


>sp|GATB_SULTO|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfurisphaera tokodaii (strain DSM

Query: 2 EVRETYPQL 10
E+R+T P+L
Sbjct: 286 EIRKTLPEL 294


>sp|RFRNP_STAMF|RNA-FREE ribonuclease P|Staphylothermus marinus (strain ATCC 43588

Query: 1 HEVRETY 7
HE+RE Y
Sbjct: 146 HELREKY 152


>sp|PELO_PYRFU|PROTEIN pelota homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VRETYPQL 10
+RE YP+L
Sbjct: 218 LRENYPEL 225


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 3 VRETYPQL 10
+RE YP+L
Sbjct: 218 LRENYPEL 225




50|SequenceR|255|246|LFESLHEVRE

>sp|ILVC_METAR|KETOL-ACID reductoisomerase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 2 FESLHEVR 9
FE+LHE++
Sbjct: 226 FETLHELK 233


>sp|KTHY_METS5|PROBABLE thymidylate kinase|Metallosphaera sedula (strain ATCC 51363

Query: 3 ESLHEVRE 10
+SLH+VRE
Sbjct: 143 KSLHQVRE 150


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LFESLHEVRE 10
+FE++H +RE
Sbjct: 49 VFETIHRLRE 58


>sp|GSA_METPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 SLHEVR 9
SLHEVR
Sbjct: 87 SLHEVR 92


>sp|ILVC_METS3|KETOL-ACID reductoisomerase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 2 FESLHEVR 9
FE+ HEV+
Sbjct: 225 FETCHEVK 232


>sp|COFC_METTH|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 FESLHEVRE 10
FE +HE RE
Sbjct: 154 FEHIHEARE 162


>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 2 FESLHEVR 9
FE LHE R
Sbjct: 151 FEDLHEDR 158


>sp|ILVC_METMA|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina mazei (strain ATCC

Query: 2 FESLHEVR 9
FE+ HEV+
Sbjct: 226 FETCHEVK 233


>sp|ILVC_METBU|KETOL-ACID reductoisomerase (NADP(+))|Methanococcoides burtonii (strain DSM

Query: 2 FESLHEVR 9
FE+LHE++
Sbjct: 226 FETLHELK 233


>sp|RFRNP_STAMF|RNA-FREE ribonuclease P|Staphylothermus marinus (strain ATCC 43588

Query: 3 ESLHEVRE 10
E++HE+RE
Sbjct: 143 ETIHELRE 150


>sp|ILVC_METBF|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 2 FESLHEVR 9
FE+ HEV+
Sbjct: 226 FETCHEVK 233


>sp|ILVC_METAC|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina acetivorans (strain ATCC

Query: 2 FESLHEVR 9
FE+ HEV+
Sbjct: 226 FETCHEVK 233


>sp|SEPS_METKA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 LFESLHEVRE 10
LFE++ ++RE
Sbjct: 52 LFETIQQLRE 61


>sp|AAT_SULTO|ASPARTATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FESLHEVRE 10
FES EV+E
Sbjct: 285 FESFDEVKE 293


>sp|Y060_ARCFU|UNCHARACTERIZED protein AF_0060|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LFESLHEVRE 10
LFE + E+RE
Sbjct: 44 LFEEMDELRE 53


>sp|RFRNP_METTH|RNA-FREE ribonuclease P|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LFESLHEVRE 10
+E +H++RE
Sbjct: 98 FYEYVHDIRE 107


>sp|Y417_METJA|UNCHARACTERIZED protein MJ0417|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LFESLHEVRE 10
L+E+L VRE
Sbjct: 75 LYEALDRVRE 84




51|SequenceR|260|251|PKIDVLFESL

>sp|FLPA_PYRHO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus horikoshii (strain ATCC

Query: 1 PKIDVLFESL 10
PK+DV+FE +
Sbjct: 142 PKVDVIFEDV 151


>sp|FLPA_PYRAB|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 PKIDVLFESL 10
PK+DV+FE +
Sbjct: 142 PKVDVIFEDV 151


>sp|FLPA_THEKO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus kodakarensis (strain

Query: 1 PKIDVLFESL 10
PK+DV+FE +
Sbjct: 141 PKVDVIFEDV 150


>sp|FLPA_THEGJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus gammatolerans (strain

Query: 1 PKIDVLFESL 10
PK+DV+FE +
Sbjct: 141 PKVDVIFEDV 150


>sp|FLPA_THEON|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus onnurineus (strain

Query: 1 PKIDVLFESL 10
PK+DV+FE +
Sbjct: 141 PKVDVIFEDV 150


>sp|IF2G_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 3 IDVLFESL 10
ID+LFE++
Sbjct: 186 IDILFEAI 193


>sp|Y1800_ARCFU|PUTATIVE transport protein AF_1800|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KIDVLFESL 10
+IDV FESL
Sbjct: 185 EIDVTFESL 193


>sp|CHEB_HALSA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Halobacterium

Query: 1 PKIDVLFES 9
P IDV F+S
Sbjct: 260 PAIDVTFKS 268


>sp|CHEB_HALS3|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Halobacterium

Query: 1 PKIDVLFES 9
P IDV F+S
Sbjct: 260 PAIDVTFKS 268


>sp|PYRB_THEKO|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus kodakarensis

Query: 1 PKIDVLF 7
PK+DVL+
Sbjct: 220 PKLDVLY 226


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PKIDVLFE 8
PKID FE
Sbjct: 463 PKIDFAFE 470


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PKIDVLFE 8
PKID FE
Sbjct: 463 PKIDFAFE 470


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PKIDVLFE 8
PKID FE
Sbjct: 463 PKIDFAFE 470


>sp|FLPA_METM6|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 2 KIDVLFESL 10
K+DV+FE +
Sbjct: 143 KVDVIFEDV 151


>sp|FLPA_PYRFU|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 2 KIDVLFESL 10
K+DV+FE +
Sbjct: 143 KVDVIFEDV 151


>sp|FLPA_THESM|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus sibiricus (strain DSM

Query: 2 KIDVLFESL 10
K+DV+FE +
Sbjct: 142 KVDVIFEDV 150


>sp|FLPA_METVO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus voltae

Query: 2 KIDVLFESL 10
K+DV+FE +
Sbjct: 141 KVDVIFEDV 149


>sp|FLPA_METM5|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 2 KIDVLFESL 10
K+DV+FE +
Sbjct: 143 KVDVIFEDV 151


>sp|FLPA_METMP|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 2 KIDVLFESL 10
K+DV+FE +
Sbjct: 143 KVDVIFEDV 151


>sp|FLPA_METM7|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 2 KIDVLFESL 10
K+DV+FE +
Sbjct: 143 KVDVIFEDV 151


>sp|FLPA_METVS|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus vannielii (strain

Query: 2 KIDVLFESL 10
K+DV+FE +
Sbjct: 143 KVDVIFEDV 151


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 1 PKIDVLFESL 10
PK+DV+ + L
Sbjct: 334 PKLDVIIQRL 343


>sp|KAD_METAC|ADENYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KIDVLFESL 10
+IDV+FE L
Sbjct: 199 EIDVVFEDL 207


>sp|CHEB1_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina mazei

Query: 1 PKIDVLFESL 10
P +DV+ ES+
Sbjct: 267 PAVDVIAESM 276




52|SequenceR|265|256|DFTLSPKIDV

>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 1 DFTLSP 6
DFTLSP
Sbjct: 31 DFTLSP 36


>sp|YA00_PYRHO|PUTATIVE transport protein PH1000|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DFTLSPKI 8
DFT+ PK+
Sbjct: 293 DFTIRPKL 300


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DFTLSPKI 8
DF ++PKI
Sbjct: 1178 DFIITPKI 1185


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DFTLSPKIDV 10
DF LSP D+
Sbjct: 515 DFVLSPDNDI 524




53|SequenceR|270|261|LLPIVDFTLS

>sp|RL5_NANEQ|LARGE ribosomal subunit protein uL5|Nanoarchaeum equitans (strain

Query: 1 LLPIVDFTL 9
LLP VDF +
Sbjct: 80 LLPAVDFKI 88


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LPIVDFTLS 10
LPI DF +S
Sbjct: 263 LPIFDFIVS 271


>sp|AAT_SULTO|ASPARTATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LPIVDFTLS 10
+P+ DF+LS
Sbjct: 1 MPVDDFSLS 9


>sp|TRPC_PYRAR|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LPIVDFT 8
LP+VDF+
Sbjct: 26 LPLVDFS 32


>sp|TRPC_PYRAE|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LPIVDFTLS 10
LP+VDF S
Sbjct: 26 LPLVDFIKS 34


>sp|TRPC_PYRNV|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 PIVDFT 8
P+VDFT
Sbjct: 27 PLVDFT 32




54|SequenceR|275|266|PGYPDLLPIV

>sp|PXPA_THEON|5-OXOPROLINASE subunit A|Thermococcus onnurineus (strain NA1)

Query: 1 PGYPDLL 7
PGYPDLL
Sbjct: 63 PGYPDLL 69


>sp|PXPA_THEKO|5-OXOPROLINASE subunit A|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PGYPDLL 7
PGYPDLL
Sbjct: 63 PGYPDLL 69


>sp|PXPA_THESM|5-OXOPROLINASE subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 1 PGYPDLL 7
PGYPDL+
Sbjct: 63 PGYPDLM 69


>sp|PXPA_PYRAB|5-OXOPROLINASE subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 PGYPDLL 7
PGYPDL+
Sbjct: 63 PGYPDLM 69


>sp|PXPA_PYRFU|5-OXOPROLINASE subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PGYPDLL 7
PGYPDL+
Sbjct: 63 PGYPDLM 69


>sp|PXPA_PYRHO|5-OXOPROLINASE subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PGYPDLL 7
PGYPDL+
Sbjct: 63 PGYPDLM 69


>sp|AATE_CENSY|A-TYPE ATP synthase subunit E|Cenarchaeum symbiosum (strain A)

Query: 1 PGYPDLL 7
PGYPD++
Sbjct: 103 PGYPDMI 109


>sp|QUEC_METMJ|7-CYANO-7-DEAZAGUANINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PGYPDLLP 8
PGYPD P
Sbjct: 130 PGYPDCRP 137


>sp|RISC_ARCFU|RIBOFLAVIN synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GYPDLLPIV 10
GYPD+ PI+
Sbjct: 144 GYPDVGPIL 152


>sp|GUAAA_METB6|GMP synthase [glutamine-hydrolyzing] subunit A|Methanoregula boonei

Query: 1 PGYPDLLPI 9
GYPD++P+
Sbjct: 112 SGYPDIIPV 120


>sp|BRIX_METMA|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina mazei

Query: 3 YPDLLPIV 10
+PD+LP++
Sbjct: 89 FPDVLPVL 96


>sp|IDI2_METAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GYPDLLPI 9
G+PD LP+
Sbjct: 71 GHPDTLPV 78


>sp|RPO2N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanococcus vannielii (strain ATCC

Query: 1 PGYPDLLPIV 10
PG P +P+V
Sbjct: 213 PGMPSTIPLV 222


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GYPDLLPIV 10
GY DL+P++
Sbjct: 368 GYMDLIPVM 376


>sp|QUEC_METLZ|7-CYANO-7-DEAZAGUANINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GYPDLLP 8
GYPD P
Sbjct: 131 GYPDCTP 137


>sp|RPO3_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma acidophilum (strain ATCC

Query: 3 YPDLLPI 9
+PDL+P+
Sbjct: 125 HPDLIPV 131


>sp|AROA_METLZ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 4 PDLLPIV 10
PDL PI+
Sbjct: 303 PDLFPII 309


>sp|RISC_AERPE|RIBOFLAVIN synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GYPDLLPI 9
GYPD PI
Sbjct: 147 GYPDAGPI 154


>sp|IDI2_METMA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GYPDLLPI 9
G+PD +P+
Sbjct: 71 GHPDTIPV 78


>sp|RPO3_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma volcanium (strain ATCC

Query: 3 YPDLLPI 9
+PDL+P+
Sbjct: 125 HPDLVPV 131


>sp|GATB_METHJ|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 4 PDLLPI 9
PDLLP+
Sbjct: 273 PDLLPL 278


>sp|QUEC_HALSA|7-CYANO-7-DEAZAGUANINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GYPDLLP 8
GYPD P
Sbjct: 133 GYPDCQP 139


>sp|QUEC_HALS3|7-CYANO-7-DEAZAGUANINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GYPDLLP 8
GYPD P
Sbjct: 133 GYPDCQP 139


>sp|AROA_METTH|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanothermobacter thermautotrophicus

Query: 4 PDLLPIV 10
PDLLP V
Sbjct: 304 PDLLPTV 310


>sp|RPO1C_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Haloarcula marismortui (strain ATCC

Query: 1 PGYPDLLPIV 10
P Y DLL +V
Sbjct: 209 PSYRDLLQLV 218


>sp|AROA_PYRAB|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 YPDLLPIV 10
+PDL PI+
Sbjct: 295 FPDLFPIL 302


>sp|GATB_METMP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain DSM

Query: 4 PDLLPIV 10
PDL PIV
Sbjct: 262 PDLQPIV 268


>sp|AROA_NATPD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 PDLLPIV 10
PDLLP +
Sbjct: 319 PDLLPTI 325


>sp|GATB_METM5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C5 /

Query: 4 PDLLPIV 10
PDL PIV
Sbjct: 262 PDLQPIV 268


>sp|GATB_METM7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C7 /

Query: 4 PDLLPIV 10
PDL PIV
Sbjct: 262 PDLQPIV 268


>sp|QUEC_HALMA|7-CYANO-7-DEAZAGUANINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GYPDLLP 8
GYPD P
Sbjct: 135 GYPDCRP 141


>sp|GATB_METM6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C6 /

Query: 4 PDLLPIV 10
PDL PIV
Sbjct: 262 PDLQPIV 268


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 1 PGYPDLLPIV 10
PG P +P+V
Sbjct: 214 PGMPGQIPLV 223


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 4 PDLLPIV 10
PDL PIV
Sbjct: 262 PDLQPIV 268


>sp|AROA_CALMQ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 4 PDLLPIV 10
PDL P+V
Sbjct: 296 PDLAPVV 302


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 4 PDLLPIV 10
PDL PIV
Sbjct: 262 PDLQPIV 268


>sp|QUEC_METHJ|7-CYANO-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GYPDLLP 8
GYPD P
Sbjct: 130 GYPDCRP 136


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 GYPDLLPIV 10
G PDLL I+
Sbjct: 206 GVPDLLVII 214


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 GYPDLLPIV 10
G PDLL I+
Sbjct: 206 GVPDLLVII 214


>sp|AROA_HALWD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 PDLLPIV 10
PDLLP +
Sbjct: 311 PDLLPTI 317


>sp|AROA_METST|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 4 PDLLPIV 10
PDLLP +
Sbjct: 314 PDLLPTI 320


>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 GYPDLLPIV 10
G PDLL I+
Sbjct: 206 GIPDLLVII 214


>sp|KORA_METJA|2-OXOGLUTARATE synthase subunit KorA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GYPDLLP 8
GYPD+ P
Sbjct: 231 GYPDVSP 237


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 GYPDLLPIV 10
G PDLL I+
Sbjct: 206 GIPDLLVII 214


>sp|AROA_HALS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halobacterium salinarum (strain ATCC

Query: 4 PDLLPIV 10
PDLLP +
Sbjct: 311 PDLLPTI 317


>sp|SYFB_THEAC|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PGYPDL 6
PGYP++
Sbjct: 307 PGYPEI 312


>sp|NADE_PYRAE|NH(3)-DEPENDENT NAD(+) synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PGYPDLLP 8
P YPD+ P
Sbjct: 255 PAYPDITP 262


>sp|AROA_PYRFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YPDLLPIV 10
+PDL P++
Sbjct: 293 FPDLFPLL 300


>sp|AROA_HALSA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halobacterium salinarum (strain ATCC

Query: 4 PDLLPIV 10
PDLLP +
Sbjct: 320 PDLLPTI 326


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 2 GYPDLLPIV 10
G PDLL I+
Sbjct: 206 GVPDLLIII 214


>sp|QUEC_THEAC|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GYPDLLP 8
GYPD P
Sbjct: 131 GYPDCRP 137


>sp|QUEC_THEVO|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GYPDLLP 8
GYPD P
Sbjct: 130 GYPDCRP 136


>sp|CARA_THEAC|CARBAMOYL phosphate synthase small chain|Thermoplasma acidophilum (strain

Query: 1 PGYPDLLPIV 10
P +P L P+V
Sbjct: 217 PDHPSLRPVV 226


>sp|QUEC_PICTO|7-CYANO-7-DEAZAGUANINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 GYPDLLP 8
GYPD P
Sbjct: 129 GYPDCRP 135


>sp|PGK_HALSA|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GYPDLLP 8
G+P++LP
Sbjct: 164 GFPEVLP 170


>sp|PGK_HALS3|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GYPDLLP 8
G+P++LP
Sbjct: 164 GFPEVLP 170


>sp|COFD_METLZ|2-PHOSPHO-L-LACTATE transferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GYPDLLPI 9
GY +LLP+
Sbjct: 82 GYTELLPL 89


>sp|RL1_METB6|LARGE ribosomal subunit protein uL1|Methanoregula boonei (strain DSM

Query: 1 PGYPDLLPIV 10
PG D+ PIV
Sbjct: 136 PGQTDIRPIV 145


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 1 PGYPDLLPI 9
P PD LP+
Sbjct: 216 PSKPDTLPL 224


>sp|QUEC_METPE|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 GYPDLLP 8
GYPD P
Sbjct: 130 GYPDCRP 136


>sp|AROA_HALLT|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 4 PDLLPIV 10
PDLLP +
Sbjct: 329 PDLLPTI 335




55|SequenceR|280|271|PDSGAPGYPD

>sp|QUEC_AERPE|7-CYANO-7-DEAZAGUANINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PDSGAPGYPD 10
PD+G P YPD
Sbjct: 146 PDTGEPLYPD 155


>sp|Y763_ARCFU|UNCHARACTERIZED protein AF_0763|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 PGYPD 10
PGYPD
Sbjct: 57 PGYPD 61


>sp|PXPA_THESM|5-OXOPROLINASE subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 6 PGYPD 10
PGYPD
Sbjct: 63 PGYPD 67


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain ATCC

Query: 4 GAPGYP 9
G PGYP
Sbjct: 207 GVPGYP 212


>sp|PXPA_PYRAB|5-OXOPROLINASE subunit A|Pyrococcus abyssi (strain GE5 /

Query: 6 PGYPD 10
PGYPD
Sbjct: 63 PGYPD 67


>sp|HEM12_PYRAR|GLUTAMYL-TRNA reductase 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PDSGAPGYP 9
P S APG P
Sbjct: 265 PQSVAPGLP 273


>sp|PXPA_THEKO|5-OXOPROLINASE subunit A|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 6 PGYPD 10
PGYPD
Sbjct: 63 PGYPD 67


>sp|PXPA_PYRFU|5-OXOPROLINASE subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 6 PGYPD 10
PGYPD
Sbjct: 63 PGYPD 67


>sp|PXPA_THEON|5-OXOPROLINASE subunit A|Thermococcus onnurineus (strain NA1)

Query: 6 PGYPD 10
PGYPD
Sbjct: 63 PGYPD 67


>sp|PXPA_PYRHO|5-OXOPROLINASE subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 PGYPD 10
PGYPD
Sbjct: 63 PGYPD 67


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 4 GAPGYP 9
G PGYP
Sbjct: 302 GLPGYP 307


>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SGAPGY 8
+GAPGY
Sbjct: 206 AGAPGY 211


>sp|TRUD1_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain DSM

Query: 3 SGAPGYPD 10
SGAP Y D
Sbjct: 134 SGAPNYYD 141


>sp|QUEC_METMJ|7-CYANO-7-DEAZAGUANINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 6 PGYPD 10
PGYPD
Sbjct: 130 PGYPD 134


>sp|AATE_CENSY|A-TYPE ATP synthase subunit E|Cenarchaeum symbiosum (strain A)

Query: 5 APGYPD 10
PGYPD
Sbjct: 102 GPGYPD 107


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PDSGAPGY 8
P+SG GY
Sbjct: 495 PNSGVAGY 502


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DSGAPGYP 9
DSG PG P
Sbjct: 237 DSGEPGAP 244


>sp|RL3_METH6|LARGE ribosomal subunit protein uL3|Methanothrix harundinacea (strain

Query: 1 PDSGAPGY 8
PD G PGY
Sbjct: 277 PDGGFPGY 284


>sp|FRHA_METJA|COENZYME F420 hydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 PDSGAPGYP 9
PD GA YP
Sbjct: 211 PDLGAHEYP 219


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 SGAPGYPD 10
GAP YPD
Sbjct: 344 EGAPDYPD 351


>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 1 PDSGAPGYP 9
P G PG P
Sbjct: 213 PPEGVPGSP 221


>sp|ULIL_METAC|ULILYSIN acetivorans (strain ATCC 35395

Query: 1 PDSGAPGYP 9
P+ G P YP
Sbjct: 265 PNFGCPSYP 273


>sp|AROA_METMA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina mazei (strain ATCC

Query: 3 SGAPGYPD 10
+G PG PD
Sbjct: 74 NGKPGIPD 81


>sp|GLCDH_THEAC|GLUCOSE 1-dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 APGYP 9
APGYP
Sbjct: 281 APGYP 285


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 SGAPGYPD 10
SGA G PD
Sbjct: 154 SGAAGLPD 161


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 1 PDSGAPGY 8
PD G GY
Sbjct: 265 PDKGVRGY 272




56|SequenceR|285|276|LFELSPDSGA

>sp|KPRS_SULAC|RIBOSE-PHOSPHATE pyrophosphokinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FELSPDSGA 10
F L+PD GA
Sbjct: 160 FVLAPDKGA 168


>sp|XPB_ARCFU|DNA 3'-5' translocase XPB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LFELSPDSGA 10
+FEL PDS A
Sbjct: 226 VFELFPDSLA 235


>sp|KPRS_SULTO|RIBOSE-PHOSPHATE pyrophosphokinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FELSPDSGA 10
F L+PD GA
Sbjct: 160 FVLAPDRGA 168


>sp|KTHY_HALSA|PROBABLE thymidylate kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 FELSPDSGA 10
F++ PD+GA
Sbjct: 128 FDVDPDTGA 136


>sp|KTHY_HALS3|PROBABLE thymidylate kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 FELSPDSGA 10
F++ PD+GA
Sbjct: 128 FDVDPDTGA 136


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 3 ELSPDSG 9
EL+PD+G
Sbjct: 189 ELTPDTG 195


>sp|KPRS_SACS2|RIBOSE-PHOSPHATE pyrophosphokinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FELSPDSGA 10
F L+PD GA
Sbjct: 160 FILAPDRGA 168


>sp|KAE1B_METTH|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 LFELSPDSG 9
LF++ PD G
Sbjct: 402 LFDVDPDGG 410


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 4 LSPDSG 9
LSPDSG
Sbjct: 322 LSPDSG 327




57|SequenceR|290|281|EESVVLFELS

>sp|TRPB_PYRHO|TRYPTOPHAN synthase beta chain|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EESVVLFELS 10
EE+V+LF LS
Sbjct: 412 EETVILFNLS 421


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 1 EESVVLFELS 10
+ESVV F+LS
Sbjct: 532 DESVVQFDLS 541




58|SequenceR|295|286|GGRYTEESVV

>sp|Y1312_METJA|UPF0026 protein MJ1312|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RYTEESVV 10
+YTEES++
Sbjct: 179 KYTEESII 186


>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 1 GGRYTEES 8
GGR+ EE+
Sbjct: 278 GGRFVEEA 285


>sp|IF2G_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 GGRYTEES 8
GGR+ EE+
Sbjct: 278 GGRFVEEA 285




59|SequenceR|300|291|RNIAMGGRYT

>sp|SYE_HALSA|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RNIAMGGRYT 10
R I MGG YT
Sbjct: 194 RLIGMGGAYT 203


>sp|SYE_HALS3|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RNIAMGGRYT 10
R I MGG YT
Sbjct: 194 RLIGMGGAYT 203


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 RNIAMGGRY 9
RN +GGRY
Sbjct: 507 RNWIIGGRY 515


>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NIAMGGRYT 10
NIA+ G+YT
Sbjct: 295 NIALVGKYT 303


>sp|Y1163_METJA|UPF0173 metal-dependent hydrolase MJ1163|Methanocaldococcus jannaschii

Query: 3 IAMGGRYT 10
+ +GGRYT
Sbjct: 152 LPIGGRYT 159


>sp|TFE_METB6|TRANSCRIPTION factor E|Methanoregula boonei (strain DSM 21154

Query: 3 IAMGGRYT 10
+AMGG +T
Sbjct: 132 VAMGGNFT 139


>sp|URED_HALWD|UREASE accessory protein UreD|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RNIAMGGRYT 10
RN+A G YT
Sbjct: 215 RNLATIGEYT 224


>sp|Y816_METB6|UPF0173 metal-dependent hydrolase Mboo_0816|Methanoregula boonei (strain

Query: 3 IAMGGRYT 10
+ +GGRYT
Sbjct: 152 LPIGGRYT 159


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 NIAMGGRYT 10
N+A+ G+YT
Sbjct: 289 NVAIVGKYT 297


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RNIAMGGRYT 10
+N+ GRYT
Sbjct: 265 KNVLKQGRYT 274




60|SequenceR|305|296|NELRFRNIAM

>sp|ARGC_METMP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NELRFRNIA 9
N+L+F+NIA
Sbjct: 56 NDLKFQNIA 64


>sp|ARGC_METM7|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C7 /

Query: 1 NELRFRNIA 9
N+L F+NIA
Sbjct: 56 NDLEFQNIA 64


>sp|ARGC_METM6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C6 /

Query: 1 NELRFRNIA 9
N+L F+NIA
Sbjct: 56 NDLEFQNIA 64


>sp|ARGC_METM5|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C5 /

Query: 1 NELRFRNIA 9
N+L F+NIA
Sbjct: 56 NDLEFQNIA 64


>sp|ARGC_METVS|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NELRFRNI 8
NEL F+N+
Sbjct: 56 NELEFKNL 63




61|SequenceR|310|301|LEELDNELRF

>sp|MVK_THEON|MEVALONATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 LEELDNELRF 10
L ELDNE+RF
Sbjct: 236 LSELDNEVRF 245


>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EELDNEL 8
EELDN L
Sbjct: 327 EELDNSL 333


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LEELDNELR 9
++ELDN+L+
Sbjct: 573 IDELDNKLK 581


>sp|Y284_PYRHO|UPF0273 protein PH0284|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LEELDNELR 9
L+E+D EL+
Sbjct: 196 LDEIDGELK 204


>sp|Y1931_PYRFU|UPF0273 protein PF1931|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LEELDNELR 9
L+E+D EL+
Sbjct: 196 LDEIDGELK 204


>sp|Y1590_THEKO|UPF0273 protein TK1590|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LEELDNELR 9
L+E+D EL+
Sbjct: 196 LDEIDGELK 204


>sp|Y258_PYRAB|UPF0273 protein PYRAB02580|Pyrococcus abyssi (strain GE5 /

Query: 1 LEELDNELR 9
L+E+D EL+
Sbjct: 196 LDEIDGELK 204


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 1 LEELDNEL 8
L E+DNE+
Sbjct: 347 LHEIDNEI 354


>sp|Y3543_METJA|UNCHARACTERIZED protein MJECL43|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEELDNELR 9
+EEL+NE R
Sbjct: 334 IEELNNEFR 342


>sp|Y1359_METJA|UPF0273 protein MJ1359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEELDNELR 9
L+E+D EL+
Sbjct: 196 LDEIDGELK 204


>sp|SELD_METMP|SELENIDE, water dikinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LEELDNEL 8
L EL+NEL
Sbjct: 215 LRELENEL 222




62|SequenceR|315|306|IQYLALEELD

>sp|TCPA_THEAD|NAD(+) hydrolase TcpA|Theionarchaea archaeon (strain DG-70-1)

Query: 1 IQYLALEEL 9
I YLALE++
Sbjct: 7 ISYLALEQI 15


>sp|GLPR_HALVD|HTH-TYPE transcriptional regulator GlpR|Haloferax volcanii (strain ATCC

Query: 1 IQYLALEELD 10
+Q+ +LEE+D
Sbjct: 217 VQFASLEEID 226


>sp|DHQS_METKA|3-DEHYDROQUINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 4 LALEELD 10
LALEELD
Sbjct: 66 LALEELD 72




63|SequenceR|320|311|DKLLQIQYLA

>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DKLLQIQY 8
DKL++I+Y
Sbjct: 244 DKLIKIEY 251


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DKLLQIQY 8
DKL++++Y
Sbjct: 244 DKLIKVEY 251


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DKLLQIQY 8
DKL++++Y
Sbjct: 243 DKLIRVEY 250


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DKLLQIQY 8
DKL++++Y
Sbjct: 243 DKLIRVEY 250




64|SequenceR|325|316|ETHRLDKLLQ

>sp|GYRB_HALVD|DNA gyrase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 1 ETHRLDKLLQ 10
E HRLD++L+
Sbjct: 459 EKHRLDRILE 468


>sp|GYRB_HALL2|DNA gyrase subunit B|Haloferax lucentense (strain DSM 14919

Query: 1 ETHRLDKLLQ 10
E HRLD++L+
Sbjct: 459 EKHRLDRILE 468


>sp|ACYP_METAR|ACYLPHOSPHATASE arvoryzae (strain DSM 22066

Query: 1 ETHRLDKLLQ 10
+ H++DKLL+
Sbjct: 49 DDHQIDKLLE 58




65|SequenceR|330|321|KDEENETHRL

>sp|COFE_METM7|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C7 /

Query: 2 DEENETHRL 10
DE NET RL
Sbjct: 86 DESNETVRL 94


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KDEENETHRL 10
KD++ E HRL
Sbjct: 77 KDKKPEEHRL 86




66|SequenceR|335|326|SSSSVKDEEN

>sp|Y1114_METJA|UNCHARACTERIZED protein MJ1114|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SVKDEEN 10
SVK+EEN
Sbjct: 185 SVKNEEN 191




67|SequenceR|340|331|MRQRFSSSSV

***** No hits found ******


68|SequenceR|345|336|LLNGLMRQRF

>sp|FDHD_METTH|SULFUR carrier protein FdhD|Methanothermobacter thermautotrophicus

Query: 2 LNGLMRQRF 10
+NG M QRF
Sbjct: 33 INGGMEQRF 41


>sp|RL18_DESA1|LARGE ribosomal subunit protein uL18|Desulfurococcus amylolyticus (strain

Query: 3 NGLMRQRF 10
NGL+ +RF
Sbjct: 159 NGLLEKRF 166


>sp|TRUA_THEVO|TRNA pseudouridine synthase A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LLNGLMRQRF 10
L NGL RQR
Sbjct: 220 LNNGLKRQRL 229


>sp|CDC62_AERPE|ORC1-TYPE DNA replication protein 2|Aeropyrum pernix (strain ATCC 700893

Query: 4 GLMRQRF 10
GL+RQR+
Sbjct: 329 GLLRQRY 335


>sp|RL34_METKA|LARGE ribosomal subunit protein eL34|Methanopyrus kandleri (strain AV19

Query: 2 LNGLMRQR 9
LNG+MR R
Sbjct: 44 LNGVMRGR 51




69|SequenceR|350|341|EYPPRLLNGL

>sp|Y1607_METJA|UNCHARACTERIZED glycosyltransferase MJ1607|Methanocaldococcus jannaschii (strain

Query: 1 EYPPRLLNGL 10
EYPPR++ GL
Sbjct: 9 EYPPRIVGGL 18


>sp|CMR5_PYRFU|CRISPR system Cmr subunit Cmr5|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EYPPRLLNGL 10
EYPPR + L
Sbjct: 88 EYPPRFIEKL 97


>sp|KCY_THEVO|CYTIDYLATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YPPRLLNGL 10
Y PR+L G+
Sbjct: 182 YTPRILKGM 190


>sp|RL14_CENSY|LARGE ribosomal subunit protein uL14|Cenarchaeum symbiosum (strain A)

Query: 1 EYPPRLLNGL 10
+YP R LNG+
Sbjct: 89 KYPVRRLNGV 98


>sp|ATGT_METM5|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C5 /

Query: 4 PRLLNGL 10
P+LLNGL
Sbjct: 341 PKLLNGL 347


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 4 PRLLNGL 10
P+LLNGL
Sbjct: 341 PKLLNGL 347


>sp|RL14_NITMS|LARGE ribosomal subunit protein uL14|Nitrosopumilus maritimus (strain

Query: 1 EYPPRLLNGL 10
+YP R LNG+
Sbjct: 85 KYPVRRLNGV 94


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 4 PRLLNGL 10
P+LLNGL
Sbjct: 341 PKLLNGL 347


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 4 PRLLNGL 10
P+LLNGL
Sbjct: 341 PKLLNGL 347


>sp|XACG_HALVD|XYLOSE/ARABINOSE-BINDING protein XacG|Haloferax volcanii (strain ATCC 29605

Query: 2 YPPRLLNGL 10
YPP + +GL
Sbjct: 414 YPPTIAHGL 422


>sp|ATGT_METVS|TRNA-GUANINE(15) transglycosylase|Methanococcus vannielii (strain ATCC 35089

Query: 4 PRLLNGL 10
P+LLNGL
Sbjct: 341 PKLLNGL 347


>sp|RS30_AERPE|SMALL ribosomal subunit protein eS30|Aeropyrum pernix (strain ATCC

Query: 2 YPPRLLNGL 10
YPPRL N L
Sbjct: 28 YPPRLKNRL 36


>sp|Y224_METTH|UPF0058 protein MTH_224|Methanothermobacter thermautotrophicus (strain

Query: 3 PPRLLNGL 10
PP ++NGL
Sbjct: 74 PPNVVNGL 81


>sp|Y611_ARCFU|UNCHARACTERIZED protein AF_0611|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YPPRL 6
YPPRL
Sbjct: 64 YPPRL 68


>sp|Y1128_METJA|UNCHARACTERIZED protein MJ1128|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EYPPRLLNGL 10
E PP +LNG
Sbjct: 214 ENPPYVLNGF 223


>sp|KAE1_SACS2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 3 PPRLLNGL 10
PP ++NG+
Sbjct: 172 PPYIINGI 179


>sp|Y011_PYRAR|PROTEIN Pars_0011|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 PPRLLN 8
PPRL+N
Sbjct: 37 PPRLIN 42


>sp|Y317_METJA|UNCHARACTERIZED protein MJ0317|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PPRLLN 8
PPRL+N
Sbjct: 159 PPRLMN 164


>sp|RPO6_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo6|Pyrobaculum aerophilum (strain ATCC

Query: 2 YPPRL 6
YPPRL
Sbjct: 27 YPPRL 31




70|SequenceR|355|346|PLEPREYPPR

>sp|TF2B1_HALSA|TRANSCRIPTION initiation factor IIB 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 PLEPREYPPR 10
P++PREY PR
Sbjct: 200 PIDPREYLPR 209


>sp|TF2B3_HALSA|TRANSCRIPTION initiation factor IIB 3|Halobacterium salinarum (strain ATCC 700922

Query: 1 PLEPREYPPR 10
P +P+EY PR
Sbjct: 225 PTDPKEYLPR 234


>sp|TF2B_HALVA|TRANSCRIPTION initiation factor IIB|Haloarcula vallismortis (Halobacterium

Query: 1 PLEPREYPPR 10
P++P++Y PR
Sbjct: 23 PVDPKQYVPR 32


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PLEPREYPP 9
P++PR PP
Sbjct: 422 PVDPRLQPP 430


>sp|CMR5_PYRFU|CRISPR system Cmr subunit Cmr5|Pyrococcus furiosus (strain ATCC 43587

Query: 6 EYPPR 10
EYPPR
Sbjct: 88 EYPPR 92


>sp|Y325_METJA|UNCHARACTERIZED protein MJ0325|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LEPREYPPR 10
+EP YP R
Sbjct: 43 VEPTRYPDR 51


>sp|TF2B7_HALSA|TRANSCRIPTION initiation factor IIB 7|Halobacterium salinarum (strain ATCC 700922

Query: 1 PLEPREYPPR 10
P++P++Y PR
Sbjct: 231 PVDPKKYVPR 240


>sp|SRP19_NATPD|SIGNAL recognition particle 19 kDa|Natronomonas pharaonis (strain ATCC

Query: 4 PREYPPR 10
PREY PR
Sbjct: 57 PREYEPR 63


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PLEPREYPPR 10
PL+P+++ P+
Sbjct: 306 PLKPKDFTPK 315


>sp|DPCKG_PYRHO|GTP-DEPENDENT dephospho-CoA kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EPREYPPR 10
E REY PR
Sbjct: 73 ERREYKPR 80




71|SequenceR|360|351|VYLCTPLEPR

>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 VYLCTPLEP 9
V+LCTP P
Sbjct: 168 VFLCTPNNP 176


>sp|KCY_IGNH4|CYTIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VYLCTPLEPR 10
VYL PLE R
Sbjct: 96 VYLTAPLEER 105


>sp|HIS8_METKA|HISTIDINOL-PHOSPHATE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 VYLCTPLEP 9
VYLCTP P
Sbjct: 185 VYLCTPNNP 193


>sp|LEUC_METB6|3-ISOPROPYLMALATE dehydratase large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 VYLCTP 6
VYLC+P
Sbjct: 393 VYLCSP 398


>sp|UPPS_HALSA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Halobacterium

Query: 1 VYLCTPLEP 9
V+ CTP P
Sbjct: 225 VFFCTPYWP 233


>sp|FAU1_NATPD|PROBABLE ribonuclease FAU-1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VYLCTPLE 8
V +CTPLE
Sbjct: 395 VNICTPLE 402


>sp|DAPAT_METS3|LL-DIAMINOPIMELATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VYLCTPLEP 9
+YLC P P
Sbjct: 181 IYLCYPNNP 189


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VYLCTPLEP 9
+YLC P P
Sbjct: 181 IYLCYPNNP 189


>sp|GLMS_HALSA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Halobacterium salinarum (strain ATCC

Query: 4 CTPLEP 9
C PLEP
Sbjct: 561 CGPLEP 566


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 5 TPLEPR 10
TPLEP+
Sbjct: 963 TPLEPK 968


>sp|RAD50_METAC|DNA double-strand break repair Rad50|Methanosarcina acetivorans (strain

Query: 5 TPLEPR 10
TPLEP+
Sbjct: 967 TPLEPK 972


>sp|FAU1_HALWD|PROBABLE ribonuclease FAU-1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VYLCTPLE 8
V +CTP+E
Sbjct: 437 VNICTPIE 444


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 VYLCTPLEP 9
+YLC P P
Sbjct: 180 IYLCYPNNP 188


>sp|HIS8_HALSA|HISTIDINOL-PHOSPHATE aminotransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VYLCTPLEP 9
VYL TP P
Sbjct: 159 VYLTTPHNP 167


>sp|HIS8_HALS3|HISTIDINOL-PHOSPHATE aminotransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VYLCTPLEP 9
VYL TP P
Sbjct: 159 VYLTTPHNP 167


>sp|PURA_THEON|ADENYLOSUCCINATE synthetase|Thermococcus onnurineus (strain NA1)

Query: 2 YLCTPLEPR 10
Y C +EPR
Sbjct: 101 YRCAIIEPR 109


>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VYLCTPLEP 9
+YLC ++P
Sbjct: 55 IYLCDDMDP 63


>sp|PURA_THESM|ADENYLOSUCCINATE synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 2 YLCTPLEP 9
Y CT +EP
Sbjct: 101 YRCTVIEP 108


>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein MJ0993|Methanocaldococcus

Query: 3 LCTPLEP 9
+CTPL P
Sbjct: 331 VCTPLNP 337


>sp|FAU1_HALMA|PROBABLE ribonuclease FAU-1|Haloarcula marismortui (strain ATCC 43049

Query: 1 VYLCTPLE 8
V +CTP+E
Sbjct: 399 VNVCTPVE 406


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VYLCTPLEP 9
+Y TP+EP
Sbjct: 1093 LYQLTPVEP 1101


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 VYLCTPLEP 9
+YLC ++P
Sbjct: 55 IYLCDDMDP 63


>sp|HIS82_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VYLCTPLEP 9
V+LC+P P
Sbjct: 146 VFLCSPNNP 154


>sp|SYK_THEAC|LYSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VYLCTPLEP 9
+YLC ++P
Sbjct: 58 IYLCDDMDP 66


>sp|HIS8_HALVD|HISTIDINOL-PHOSPHATE aminotransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 VYLCTPLEP 9
VYL TP P
Sbjct: 158 VYLTTPHNP 166




72|SequenceR|365|356|GTLGIVYLCT

>sp|MJK2_METJA|PROBABLE potassium channel protein 2|Methanocaldococcus jannaschii (strain

Query: 2 TLGIVYLC 9
TL +VYLC
Sbjct: 61 TLTVVYLC 68


>sp|CSG_METBF|MAJOR S-layer protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 GTLGIVYL 8
G LG+VYL
Sbjct: 656 GLLGVVYL 663


>sp|Y1534_PYRCJ|UPF0284 protein Pcal_1534|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GTLGIVYL 8
G LG+VYL
Sbjct: 130 GRLGVVYL 137


>sp|HIS8_METKA|HISTIDINOL-PHOSPHATE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 5 IVYLCT 10
+VYLCT
Sbjct: 184 LVYLCT 189


>sp|HEM11_PYRCJ|GLUTAMYL-TRNA reductase 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GTLGIVYL 8
G+L IVYL
Sbjct: 150 GSLSIVYL 157


>sp|HELS_THEVO|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GTLGIVYL 8
G LGI YL
Sbjct: 341 GDLGITYL 348




73|SequenceR|370|361|GSGSIGTLGI

>sp|DCDB_METTH|DCTP deaminase, dUMP-forming|Methanothermobacter thermautotrophicus

Query: 1 GSGSIGTLGI 10
G SIG LGI
Sbjct: 104 GRSSIGRLGI 113


>sp|HEM1_METVS|GLUTAMYL-TRNA reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GSGSIGTL 8
G+G IGTL
Sbjct: 163 GAGEIGTL 170


>sp|HEM1_METMP|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GSGSIGTL 8
G+G IGTL
Sbjct: 164 GAGEIGTL 171


>sp|HEM1_METM7|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C7 /

Query: 1 GSGSIGTL 8
G+G IGTL
Sbjct: 164 GAGEIGTL 171


>sp|Y640_METJA|UNCHARACTERIZED protein MJ0640|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GSIGTLGI 10
G+IGTLG+
Sbjct: 224 GAIGTLGM 231


>sp|TRKA_PYRHO|TRK system potassium uptake protein|Pyrococcus horikoshii (strain

Query: 1 GSGSIGTL 8
G+G IGTL
Sbjct: 7 GAGRIGTL 14


>sp|TRKA_PYRAB|TRK system potassium uptake protein|Pyrococcus abyssi (strain GE5 /

Query: 1 GSGSIGTL 8
G+G IGTL
Sbjct: 7 GAGRIGTL 14


>sp|TDH_THEON|L-THREONINE 3-dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 1 GSGSIGTLGI 10
G+G +G LGI
Sbjct: 175 GAGPLGLLGI 184


>sp|TDH_THEKO|L-THREONINE 3-dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GSGSIGTLGI 10
G+G +G LGI
Sbjct: 175 GAGPLGLLGI 184


>sp|CDC62_AERPE|ORC1-TYPE DNA replication protein 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 GSIGTLGI 10
GSIG +GI
Sbjct: 54 GSIGRVGI 61


>sp|DCDB_METKA|DCTP deaminase, dUMP-forming|Methanopyrus kandleri (strain AV19 /

Query: 1 GSGSIGTLGI 10
G S+G LGI
Sbjct: 106 GRSSLGRLGI 115


>sp|TDH_PYRFU|L-THREONINE 3-dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GSGSIGTLGI 10
G+G +G LGI
Sbjct: 175 GAGPLGLLGI 184


>sp|Y661_METTH|PUTATIVE ammonium transporter MTH_661|Methanothermobacter thermautotrophicus

Query: 2 SGSIGTLGI 10
SG IGTLG+
Sbjct: 319 SGIIGTLGV 327


>sp|TDH_PYRAB|L-THREONINE 3-dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 GSGSIGTLGI 10
G+G +G LGI
Sbjct: 175 GAGPLGLLGI 184


>sp|PSB2_SULTO|PROTEASOME subunit beta 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GSGSIGTLGI 10
GSGS+ +G+
Sbjct: 141 GSGSVEAIGV 150


>sp|TDH_PYRHO|L-THREONINE 3-dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GSGSIGTLGI 10
G+G +G LGI
Sbjct: 175 GAGPLGLLGI 184


>sp|PANE_THEKO|2-DEHYDROPANTOATE 2-reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GSGSIGTL 8
G+GSIG+L
Sbjct: 7 GAGSIGSL 14




74|SequenceR|375|366|AISSKGSGSI

>sp|SODF_METTH|SUPEROXIDE dismutase [Fe]|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 AISSKGSG 8
AIS++GSG
Sbjct: 124 AISAEGSG 131




75|SequenceR|380|371|GKLRQAISSK

>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 1 GKLRQAISSK 10
GK+R ISSK
Sbjct: 289 GKIRVTISSK 298


>sp|TFE_PYRAR|TRANSCRIPTION factor E|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 LRQAISSK 10
+RQAISS+
Sbjct: 92 IRQAISSR 99




76|SequenceR|385|376|VFAGLGKLRQ

>sp|Y796_METKA|UPF0288 protein MK0796|Methanopyrus kandleri (strain AV19 /

Query: 1 VFAGLGKLRQ 10
V GLG+LR+
Sbjct: 483 VVEGLGRLRE 492


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 1 VFAGLGKLR 9
V AGLGK++
Sbjct: 526 VVAGLGKVK 534


>sp|Y666_METKA|UPF0305 protein MK0666|Methanopyrus kandleri (strain AV19 /

Query: 2 FAGLGKLRQ 10
F G+GK+R+
Sbjct: 100 FPGVGKVRR 108


>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 1 VFAGLGKLRQ 10
VF G+ KL++
Sbjct: 119 VFGGMNKLKK 128


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 1 VFAGLGKLRQ 10
VF G+ KL++
Sbjct: 119 VFGGMNKLKK 128


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VFAGLGKLR 9
V AGLGK++
Sbjct: 525 VVAGLGKVK 533




77|SequenceR|390|381|HDSDIVFAGL

>sp|LYSK_PYRFU|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus furiosus

Query: 2 DSDIVFAGL 10
D++I+FAGL
Sbjct: 106 DANIIFAGL 114


>sp|DHAS_ARCFU|ASPARTATE-SEMIALDEHYDE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DSDIVFAGL 10
D+DIVF+ L
Sbjct: 74 DADIVFSAL 82


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 DSDIVFAGL 10
+SD+VF G+
Sbjct: 113 ESDVVFGGM 121


>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 2 DSDIVFAGL 10
+SD+VF G+
Sbjct: 115 ESDVVFGGM 123


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 2 DSDIVFAGL 10
+SD+VF G+
Sbjct: 115 ESDVVFGGM 123


>sp|LEUD_METMA|3-ISOPROPYLMALATE dehydratase small subunit|Methanosarcina mazei (strain ATCC

Query: 1 HDSDIVFAG 9
H++DIV AG
Sbjct: 48 HENDIVVAG 56


>sp|LEUD_METAC|3-ISOPROPYLMALATE dehydratase small subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 HDSDIVFAG 9
H++DIV AG
Sbjct: 48 HENDIVVAG 56


>sp|PRIS_METAR|DNA primase small subunit PriS|Methanocella arvoryzae (strain DSM 22066

Query: 2 DSDIVFAG 9
D DIVF+G
Sbjct: 141 DMDIVFSG 148


>sp|SMC_PYRFU|CHROMOSOME partition protein Smc|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SDIVFAG 9
SD++FAG
Sbjct: 64 SDLIFAG 70


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 HDSDIVFA 8
HDS ++FA
Sbjct: 934 HDSQLLFA 941


>sp|TRPG1_HALMA|ANTHRANILATE synthase component II|Haloarcula marismortui (strain ATCC 43049

Query: 1 HDSDIVFAGL 10
HD VFAGL
Sbjct: 126 HDGKGVFAGL 135


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 2 DSDIVFAGL 10
D+D VF G+
Sbjct: 263 DADFVFMGM 271


>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 2 DSDIVFAGL 10
D+D VF G+
Sbjct: 264 DADFVFMGM 272


>sp|VORA_PYRFU|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DSDIVFAGL 10
D+D VF G+
Sbjct: 263 DADFVFMGM 271


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 DSDIVFAGL 10
++D+VF G+
Sbjct: 113 ETDVVFGGM 121


>sp|LYSK_THEKO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Thermococcus kodakarensis

Query: 2 DSDIVFAGL 10
+++I+FAGL
Sbjct: 106 NANIIFAGL 114


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 HDSDIVF 7
HD DIV+
Sbjct: 1042 HDMDIVY 1048


>sp|AGL9_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl9|Haloferax volcanii

Query: 2 DSDIVFAGL 10
D I+FAG+
Sbjct: 274 DQQIIFAGI 282


>sp|ARGC_METMP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DSDIVF 7
DSDIVF
Sbjct: 69 DSDIVF 74


>sp|TRPG_HALVD|ANTHRANILATE synthase component 2|Haloferax volcanii (strain ATCC 29605

Query: 1 HDSDIVFAGL 10
HD VFAGL
Sbjct: 118 HDGAGVFAGL 127


>sp|ARGC_METST|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DSDIVFAGL 10
D+D+VF+ L
Sbjct: 67 DADVVFSAL 75


>sp|HMGCS_METBU|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 DSDIVFAGL 10
D+DI+ AGL
Sbjct: 29 DADILSAGL 37


>sp|HIS1_METBU|ATP phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 2 DSDIVFA 8
D+DI+FA
Sbjct: 255 DADIIFA 261




78|SequenceR|395|386|ARHGLHDSDI

>sp|ARFB_METMP|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain

Query: 2 RHGLHDS 8
+HG+HDS
Sbjct: 73 KHGIHDS 79


>sp|ARFB_METM6|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain C6

Query: 2 RHGLHDS 8
+HG+HDS
Sbjct: 73 KHGIHDS 79


>sp|ARFB_METM5|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain C5

Query: 2 RHGLHDS 8
+HG+HDS
Sbjct: 73 KHGIHDS 79


>sp|ARFB_METM7|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain C7

Query: 2 RHGLHDS 8
+HG+HDS
Sbjct: 73 KHGIHDS 79


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 ARHGLHD 7
ARH LHD
Sbjct: 113 ARHMLHD 119


>sp|TRPB_PYRAR|TRYPTOPHAN synthase beta chain|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 HGLHDSD 9
HGL DSD
Sbjct: 397 HGLLDSD 403


>sp|TRPB_PYRAE|TRYPTOPHAN synthase beta chain|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 HGLHDSD 9
HGL DSD
Sbjct: 397 HGLLDSD 403


>sp|ATGT_PICTO|TRNA-GUANINE(15) transglycosylase|Picrophilus torridus (strain ATCC 700027

Query: 2 RHGLH 6
RHGLH
Sbjct: 70 RHGLH 74


>sp|ARFB_METV3|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus voltae (strain ATCC

Query: 2 RHGLHDS 8
+HG+H+S
Sbjct: 77 KHGIHNS 83


>sp|GSA_NITMS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 HGLHDS 8
HG HDS
Sbjct: 139 HGAHDS 144


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 HGLHDS 8
HG HDS
Sbjct: 141 HGAHDS 146


>sp|GSA_METTP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 HGLHDS 8
HG HDS
Sbjct: 152 HGAHDS 157


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ARHGLHDS 8
A HG HD+
Sbjct: 140 AYHGAHDA 147


>sp|ARFB_METVS|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus vannielii (strain ATCC

Query: 2 RHGLHDS 8
+HG+H+S
Sbjct: 75 KHGIHNS 81


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 ARHGLHD 7
ARH +HD
Sbjct: 287 ARHPVHD 293


>sp|KAE1_METBU|TRNA N6-adenosine threonylcarbamoyltransferase|Methanococcoides

Query: 3 HGLHDSDI 10
H LH SD+
Sbjct: 48 HALHASDV 55




79|SequenceR|400|391|GGPAYARHGL

>sp|PELO_THEVO|PROTEIN pelota homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GPAYARHGL 10
GP +A++GL
Sbjct: 196 GPGFAKNGL 204


>sp|RF1_SACS2|PEPTIDE chain release factor subunit|Saccharolobus solfataricus (strain

Query: 1 GGPAYAR 7
GGP YA+
Sbjct: 221 GGPGYAK 227


>sp|DTDA_SACS2|D-AMINOACYL-TRNA deacylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GGPAYAR 7
GGP Y+R
Sbjct: 162 GGPHYSR 168


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GGPAYARH 8
GGPA RH
Sbjct: 185 GGPAEYRH 192


>sp|METK_THEON|S-ADENOSYLMETHIONINE synthase|Thermococcus onnurineus (strain NA1)

Query: 1 GGPAYARHG 9
GG AY R G
Sbjct: 72 GGKAYPRFG 80


>sp|RNP3_METMA|RIBONUCLEASE P protein component 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GPAYARHGL 10
GP Y R G+
Sbjct: 222 GPGYVREGI 230


>sp|HMGCS_PYRIL|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GGPAYARH 8
G PAY RH
Sbjct: 204 GEPAYFRH 211


>sp|HMGCS_PYRNV|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GGPAYARH 8
G PAY RH
Sbjct: 204 GEPAYFRH 211


>sp|HMGCS_THEVO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GGPAYARH 8
G PAY RH
Sbjct: 202 GEPAYFRH 209


>sp|HMGCS_METJA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGPAYARH 8
G PAY RH
Sbjct: 202 GEPAYFRH 209


>sp|HMGCS_THEAC|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GGPAYARH 8
G PAY RH
Sbjct: 202 GEPAYFRH 209


>sp|HMGCS_PYRCJ|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GGPAYARH 8
G PAY RH
Sbjct: 204 GEPAYFRH 211


>sp|HMGCS_METVS|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GGPAYARHGL 10
G PAY RH L
Sbjct: 206 GEPAYFRHVL 215


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GGPAYARHG 9
G P Y HG
Sbjct: 387 GRPGYDNHG 395


>sp|HMGCS_PYRAE|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GGPAYARH 8
G PAY RH
Sbjct: 204 GEPAYFRH 211


>sp|HIS7_NATPD|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 AYARHGL 10
A+A+HGL
Sbjct: 44 AFAKHGL 50


>sp|HMGCS_PYRAR|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GGPAYARH 8
G PAY RH
Sbjct: 203 GEPAYFRH 210


>sp|HIS1_THEON|ATP phosphoribosyltransferase|Thermococcus onnurineus (strain NA1)

Query: 3 PAYARHGL 10
P Y HG+
Sbjct: 51 PVYVEHGI 58


>sp|HIS1_PYRFU|ATP phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PAYARHGL 10
P Y HG+
Sbjct: 51 PVYVEHGI 58


>sp|AOX1_AERPE|HEME-COPPER oxidase subunit I+III|Aeropyrum pernix (strain ATCC 700893

Query: 1 GGPAYARHGL 10
GG +++ HGL
Sbjct: 553 GGQSHSSHGL 562


>sp|HEM3_PYRAE|PROBABLE porphobilinogen deaminase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GGPAYARHG 9
GG A++R+G
Sbjct: 246 GGTAFSRNG 254


>sp|HMGCS_ARCFU|HYDROXYMETHYLGLUTARYL-COA synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGPAYARH 8
G PAY RH
Sbjct: 201 GLPAYFRH 208




80|SequenceR|405|396|PQYAPGGPAY

>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YAPGGPAY 10
Y+P GP Y
Sbjct: 353 YSPKGPVY 360


>sp|SPEB_METJA|AGMATINASE jannaschii (strain ATCC 43067

Query: 1 PQYAPG 6
P YAPG
Sbjct: 217 PAYAPG 222


>sp|ARLY_METTP|ARGININOSUCCINATE lyase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 PGGPA 9
PGGPA
Sbjct: 436 PGGPA 440


>sp|ARLY_METTH|ARGININOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 PGGPA 9
PGGPA
Sbjct: 444 PGGPA 448


>sp|ARLY_METMA|ARGININOSUCCINATE lyase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 PGGPA 9
PGGPA
Sbjct: 441 PGGPA 445


>sp|ARLY_METHJ|ARGININOSUCCINATE lyase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 PGGPA 9
PGGPA
Sbjct: 443 PGGPA 447


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PQYAPGGPAY 10
PQ PG P Y
Sbjct: 119 PQDKPGRPPY 128


>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 1 PQYAPGGPA 9
P Y PGG A
Sbjct: 223 PFYPPGGTA 231


>sp|HISX_NATPD|HISTIDINOL dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 YAPGGPA 9
YAPGG A
Sbjct: 123 YAPGGTA 129


>sp|HISX_HALMA|HISTIDINOL dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 3 YAPGGPA 9
YAPGG A
Sbjct: 123 YAPGGTA 129


>sp|FOLD2_HALMA|BIFUNCTIONAL protein FolD 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 QYAPGGPA 9
QY PGG A
Sbjct: 179 QYGPGGNA 186


>sp|SPEE1_HYPBU|POLYAMINE aminopropyltransferase 1|Hyperthermus butylicus (strain DSM 5456

Query: 3 YAPGGP 8
Y PGGP
Sbjct: 11 YQPGGP 16


>sp|KADA_SULAC|ADENYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YAPGGPAY 10
Y PG P+Y
Sbjct: 102 YLPGLPSY 109


>sp|HISX_HALSA|HISTIDINOL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 3 YAPGGPA 9
YAPGG A
Sbjct: 124 YAPGGTA 130


>sp|GGR_METAR|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 QYAPGG 7
+YAPGG
Sbjct: 202 KYAPGG 207


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 1 PQYAPGG 7
P Y PGG
Sbjct: 363 PHYYPGG 369


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 1 PQYAPGG 7
P Y PGG
Sbjct: 366 PHYYPGG 372


>sp|DCUP_PICTO|UROPORPHYRINOGEN decarboxylase|Picrophilus torridus (strain ATCC 700027

Query: 2 QYAPGGP 8
++ PGGP
Sbjct: 84 EFLPGGP 90


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 1 PQYAPGG 7
P Y PGG
Sbjct: 367 PHYYPGG 373


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 QYAPGGPAY 10
++APG P Y
Sbjct: 241 EWAPGFPLY 249


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 QYAPGGPAY 10
++APG P Y
Sbjct: 241 EWAPGFPMY 249


>sp|POK_METHJ|PANTOATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 APGGPA 9
+PGGPA
Sbjct: 276 SPGGPA 281


>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 5 PGGPAY 10
P GPAY
Sbjct: 393 PAGPAY 398


>sp|RS4_AERPE|SMALL ribosomal subunit protein uS4|Aeropyrum pernix (strain ATCC 700893

Query: 3 YAPGGP 8
YAPG P
Sbjct: 155 YAPGSP 160


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 APGGPAY 10
AP GP Y
Sbjct: 280 APSGPVY 286


>sp|ULIL_METAC|ULILYSIN acetivorans (strain ATCC 35395

Query: 5 PGGPA 9
PGGPA
Sbjct: 194 PGGPA 198


>sp|Y1661_ARCFU|UNCHARACTERIZED protein AF_1661|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QYAPGG 7
QY PGG
Sbjct: 196 QYLPGG 201


>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 APGGPAY 10
AP GP Y
Sbjct: 280 APSGPVY 286


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 APGGPAY 10
AP GP Y
Sbjct: 280 APSGPVY 286




81|SequenceR|410|401|FAEVVPQYAP

>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 2 AEVVPQYA 9
A+V+PQYA
Sbjct: 498 AKVIPQYA 505


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 FAEVVPQYAP 10
FA ++P Y P
Sbjct: 449 FAGIIPLYDP 458


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 AEVVPQYA 9
A+V PQYA
Sbjct: 496 AKVTPQYA 503


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FAEVVPQYAP 10
FAEV QY P
Sbjct: 4 FAEVDDQYDP 13


>sp|DTDA_PYRFU|D-AMINOACYL-TRNA deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FAEVVPQYA 9
F+ ++P+YA
Sbjct: 211 FSHILPKYA 219


>sp|PGK_HALSA|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 FAEVVPQYA 9
F EV+P YA
Sbjct: 165 FPEVLPSYA 173


>sp|PGK_HALS3|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 FAEVVPQYA 9
F EV+P YA
Sbjct: 165 FPEVLPSYA 173


>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 1 FAEVVPQY 8
FAEV QY
Sbjct: 586 FAEVAAQY 593




82|SequenceR|415|406|LIDTGFAEVV

>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIDTGFAEVV 10
LID G AE++
Sbjct: 421 LIDKGLAEIM 430


>sp|PGP_METTP|PHOSPHOGLYCOLATE phosphatase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LIDTGFA 7
L+DTGFA
Sbjct: 130 LVDTGFA 136


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 LIDTGFAEV 9
L+DTGF V
Sbjct: 223 LVDTGFGIV 231


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 LIDTGF 6
LIDTGF
Sbjct: 53 LIDTGF 58


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 LIDTGF 6
LIDTGF
Sbjct: 53 LIDTGF 58


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 LIDTGF 6
LIDTGF
Sbjct: 53 LIDTGF 58


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 LIDTGF 6
LIDTGF
Sbjct: 53 LIDTGF 58


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 LIDTGF 6
LIDTGF
Sbjct: 53 LIDTGF 58


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 LIDTGF 6
LIDTGF
Sbjct: 53 LIDTGF 58


>sp|THSA_THEKO|CHAPERONIN subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DTGFAEVV 10
D G+AEVV
Sbjct: 343 DLGYAEVV 350


>sp|THSA_THEK1|CHAPERONIN subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 3 DTGFAEVV 10
D G+AEVV
Sbjct: 343 DLGYAEVV 350


>sp|PGP_ARCFU|PHOSPHOGLYCOLATE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LIDTGFA 7
L+D+GFA
Sbjct: 133 LVDSGFA 139


>sp|RS3_METTP|SMALL ribosomal subunit protein uS3|Methanothrix thermoacetophila (strain

Query: 1 LIDTGFAEVV 10
++DTG+A V
Sbjct: 161 IVDTGYAVAV 170


>sp|PRPB_AERPE|2-METHYLISOCITRATE lyase|Aeropyrum pernix (strain ATCC 700893

Query: 3 DTGFAEVV 10
DTGF E +
Sbjct: 92 DTGFGEAI 99


>sp|Y1447_ARCFU|UNCHARACTERIZED protein AF_1447|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LIDTGFAEVV 10
++DT F EV+
Sbjct: 54 VLDTNFKEVI 63


>sp|PGP_METKA|PHOSPHOGLYCOLATE phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 1 LIDTGFA 7
++DTGFA
Sbjct: 140 VVDTGFA 146


>sp|PGP_METBU|PHOSPHOGLYCOLATE phosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LIDTGFA 7
+IDTG+A
Sbjct: 134 IIDTGYA 140


>sp|RL14E_METTH|LARGE ribosomal subunit protein eL14|Methanothermobacter

Query: 1 LIDTGFAEVV 10
+ID F EVV
Sbjct: 27 IIDKNFVEVV 36


>sp|THSA_THEK8|CHAPERONIN subunit alpha|Thermococcus sp. (strain KS-8)

Query: 3 DTGFAEVV 10
D G+AE+V
Sbjct: 343 DLGYAEIV 350


>sp|PGP_HALSA|PHOSPHOGLYCOLATE phosphatase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LIDTGFA 7
++DTGFA
Sbjct: 137 VVDTGFA 143


>sp|PGP_HALS3|PHOSPHOGLYCOLATE phosphatase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LIDTGFA 7
++DTGFA
Sbjct: 137 VVDTGFA 143


>sp|GUAAB_SACS2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 LIDTGF 6
L+DTGF
Sbjct: 53 LVDTGF 58




83|SequenceR|420|411|IGDKHLIDTG

>sp|Y178_METBF|UPF0284 protein Mbar_A0178|Methanosarcina barkeri (strain Fusaro /

Query: 2 GDKHLIDTG 10
GD L+DTG
Sbjct: 48 GDAELMDTG 56


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GDKHLIDT 9
GDK LI+T
Sbjct: 90 GDKELIET 97


>sp|RS13_METMP|SMALL ribosomal subunit protein uS13|Methanococcus maripaludis (strain

Query: 3 DKHLIDT 9
DKHLI+T
Sbjct: 92 DKHLIET 98


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GDKHLID 8
GDK LID
Sbjct: 90 GDKELID 96


>sp|OGG1_SACI7|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 IGDKHLID 8
I D+HLID
Sbjct: 144 IIDRHLID 151


>sp|OGG1_SACI6|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IGDKHLID 8
I D+HLID
Sbjct: 144 IIDRHLID 151


>sp|OGG1_SACI4|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IGDKHLID 8
I D+HLID
Sbjct: 144 IIDRHLID 151


>sp|OGG1_SACI3|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain M.16.27)

Query: 1 IGDKHLID 8
I D+HLID
Sbjct: 144 IIDRHLID 151


>sp|OGG1_SACI2|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 IGDKHLID 8
I D+HLID
Sbjct: 144 IIDRHLID 151


>sp|OGG1_SACI1|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 IGDKHLID 8
I D+HLID
Sbjct: 144 IIDRHLID 151


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GDKHLID 8
GDK LID
Sbjct: 89 GDKELID 95


>sp|Y3887_METAC|UPF0284 protein MA_3887|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GDKHLIDTG 10
GD LI+TG
Sbjct: 48 GDAELIETG 56


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GDKHLIDTG 10
G HLI+TG
Sbjct: 711 GGTHLINTG 719


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 2 GDKHLI 7
GDKH+I
Sbjct: 43 GDKHII 48


>sp|RS8_THEPD|SMALL ribosomal subunit protein uS8|Thermofilum pendens (strain DSM

Query: 1 IGDKHLIDTG 10
IGD LID G
Sbjct: 46 IGDFELIDDG 55


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IGDKHLIDT 9
IG++HL D+
Sbjct: 106 IGEEHLCDS 114


>sp|Y002_METMP|UPF0425 pyridoxal phosphate-dependent protein MMP0002|Methanococcus

Query: 2 GDKHLID 8
GDK+L+D
Sbjct: 222 GDKNLVD 228


>sp|SFSA_AERPE|SUGAR fermentation stimulation protein homolog|Aeropyrum pernix (strain

Query: 5 HLIDTG 10
HL+DTG
Sbjct: 34 HLMDTG 39


>sp|ADH_SULTO|NAD-DEPENDENT alcohol dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IGDKHLIDT 9
IG++HL D+
Sbjct: 106 IGEEHLCDS 114


>sp|ADH_SULSR|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus sp. (strain RC3)

Query: 1 IGDKHLIDT 9
IG++HL D+
Sbjct: 106 IGEEHLCDS 114


>sp|KHSE_THEVO|HOMOSERINE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GDKHLIDTG 10
GD+ L+ TG
Sbjct: 212 GDRELVSTG 220


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 DKHLIDTG 10
DK+L++TG
Sbjct: 168 DKNLLETG 175


>sp|IF2A_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 GDKHLIDTG 10
G+K LID G
Sbjct: 147 GEKILIDAG 155


>sp|IF2A_SACI7|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 2 GDKHLIDTG 10
G+K LID G
Sbjct: 147 GEKILIDAG 155


>sp|IF2A_SACI2|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 2 GDKHLIDTG 10
G+K LID G
Sbjct: 147 GEKILIDAG 155


>sp|IF2A_SACI1|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 2 GDKHLIDTG 10
G+K LID G
Sbjct: 147 GEKILIDAG 155


>sp|IF2A_SACI6|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain M.16.4

Query: 2 GDKHLIDTG 10
G+K LID G
Sbjct: 147 GEKILIDAG 155


>sp|IF2A_SACI4|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 2 GDKHLIDTG 10
G+K LID G
Sbjct: 147 GEKILIDAG 155


>sp|IF2A_SACI3|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 2 GDKHLIDTG 10
G+K LID G
Sbjct: 147 GEKILIDAG 155


>sp|Y919_METJA|UNCHARACTERIZED protein MJ0919|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IGDKHLIDT 9
+GD+HL+ T
Sbjct: 106 LGDEHLLIT 114


>sp|Y047_METJA|PROBABLE RNase MJ4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KHLIDTG 10
+HLI+TG
Sbjct: 346 RHLIETG 352


>sp|TF2B_CALMQ|TRANSCRIPTION initiation factor IIB|Caldivirga maquilingensis (strain ATCC

Query: 4 KHLIDTG 10
+H++DTG
Sbjct: 73 EHILDTG 79


>sp|TRPB_HALVD|TRYPTOPHAN synthase beta chain|Haloferax volcanii (strain ATCC 29605

Query: 5 HLIDTG 10
HL+DTG
Sbjct: 321 HLVDTG 326


>sp|KPRS_PYRHO|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DKHLIDT 9
D+HLI+T
Sbjct: 59 DEHLIET 65


>sp|TRPB_HALSA|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 700922

Query: 5 HLIDTG 10
HL+DTG
Sbjct: 343 HLVDTG 348


>sp|TRPB_HALS3|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 29341

Query: 5 HLIDTG 10
HL+DTG
Sbjct: 343 HLVDTG 348


>sp|THI4_METBU|THIAMINE thiazole synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IGDKHLIDT 9
+G+K L+DT
Sbjct: 203 VGEKMLLDT 211




84|SequenceR|425|416|VKRNIIGDKH

>sp|Y749_METJA|UNCHARACTERIZED protein MJ0749|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKRNIIGDK 9
+KR IIGD+
Sbjct: 52 IKRFIIGDR 60


>sp|SODM2_HALVD|SUPEROXIDE dismutase [Mn] 2|Haloferax volcanii (strain ATCC 29605

Query: 3 RNIIGDKH 10
RN++ DKH
Sbjct: 135 RNVVVDKH 142


>sp|SODM1_HALVD|SUPEROXIDE dismutase [Mn] 1|Haloferax volcanii (strain ATCC 29605

Query: 3 RNIIGDKH 10
RN++ DKH
Sbjct: 136 RNVVVDKH 143


>sp|CARA_METMA|CARBAMOYL phosphate synthase small chain|Methanosarcina mazei (strain ATCC

Query: 1 VKRNIIGDKH 10
+KRNII + H
Sbjct: 190 IKRNIINNLH 199


>sp|SODM1_HALME|SUPEROXIDE dismutase [Mn] 1|Haloferax mediterranei (Halobacterium

Query: 3 RNIIGDKH 10
RN++ DKH
Sbjct: 102 RNVVVDKH 109


>sp|IF6_THEON|TRANSLATION initiation factor 6|Thermococcus onnurineus (strain NA1)

Query: 1 VKRNIIGDKH 10
V+R +IGD H
Sbjct: 139 VERGMIGDYH 148


>sp|CARA_METAC|CARBAMOYL phosphate synthase small chain|Methanosarcina acetivorans (strain

Query: 1 VKRNIIGDKH 10
+KRNII + H
Sbjct: 190 IKRNIINNLH 199


>sp|Y1008_ARCFU|UNCHARACTERIZED protein AF_1008|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RNIIGDK 9
RN+IGDK
Sbjct: 33 RNLIGDK 39


>sp|PIP_THEVO|PROLINE iminopeptidase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VKRNIIGD 8
VK+NI GD
Sbjct: 91 VKKNIFGD 98


>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VKRNIIGDK 9
+ RN++GD+
Sbjct: 284 ISRNVLGDE 292


>sp|HIS7_SULAC|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VKRNIIGD 8
+KRN IGD
Sbjct: 122 LKRNTIGD 129


>sp|Y692_METTH|UNCHARACTERIZED protein MTH_692|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 RNIIGD 8
RNIIGD
Sbjct: 115 RNIIGD 120


>sp|MTRA1_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanothermobacter

Query: 2 KRNIIG 7
KRNIIG
Sbjct: 102 KRNIIG 107


>sp|MTRA1_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanothermobacter marburgensis

Query: 2 KRNIIG 7
KRNIIG
Sbjct: 102 KRNIIG 107


>sp|AKSA_METJA|HOMOCITRATE synthase AksA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKRNIIGDKH 10
+KRNI+ KH
Sbjct: 339 LKRNILLGKH 348


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VKRNIIGDK 9
+ RNI+ DK
Sbjct: 114 ITRNIVNDK 122


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VKRNIIGDK 9
VK+N+ G+K
Sbjct: 431 VKKNVTGEK 439


>sp|NDK_SULTO|NUCLEOSIDE diphosphate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VKRNIIGD 8
V+RN+IG+
Sbjct: 15 VRRNLIGE 22


>sp|PELO_METTP|PROTEIN pelota homolog|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VKRNIIGDK 9
+KRN+ GD+
Sbjct: 4 IKRNLRGDE 12


>sp|AKSA_METAC|HOMOCITRATE synthase AksA|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KRNIIGDKH 10
KRN++ KH
Sbjct: 329 KRNLVVGKH 337




85|SequenceR|430|421|VRSGLVKRNI

>sp|Y1301_METJA|UNCHARACTERIZED ATP-binding protein MJ1301|Methanocaldococcus jannaschii (strain

Query: 1 VRSGLVKRNI 10
+R L+KRNI
Sbjct: 366 IREFLIKRNI 375


>sp|Y439_METJA|UNCHARACTERIZED ATP-binding protein MJ0439|Methanocaldococcus jannaschii (strain

Query: 1 VRSGLVKRNI 10
+R LVK+NI
Sbjct: 327 IREFLVKKNI 336


>sp|Y1416_METJA|UNCHARACTERIZED protein MJ1416|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VRSGLVKR 8
+RSGL+K+
Sbjct: 287 IRSGLIKK 294


>sp|Y075_METJA|UNCHARACTERIZED ATP-binding protein MJ0075|Methanocaldococcus jannaschii (strain

Query: 1 VRSGLVKRNI 10
+R LVK+NI
Sbjct: 328 IREFLVKKNI 337


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VRSGLVKRNI 10
VR+G+VK+ I
Sbjct: 266 VRNGMVKKVI 275


>sp|CHED2_METAC|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina acetivorans

Query: 1 VRSGLVKRNI 10
V LVKRNI
Sbjct: 175 VEETLVKRNI 184


>sp|SYR_METVS|ARGININE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VRSGLVKRNI 10
VRSGLV+ I
Sbjct: 263 VRSGLVRNVI 272




86|SequenceR|435|426|KKNGFVRSGL

>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KNGFVRSGL 10
KN FVR GL
Sbjct: 202 KNNFVRIGL 210


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KKNGFVR 7
K NGFVR
Sbjct: 12 KNNGFVR 18


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KKNGFVR 7
K NGFVR
Sbjct: 12 KNNGFVR 18


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KKNGFVR 7
K NGFVR
Sbjct: 12 KNNGFVR 18


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KKNGFVR 7
K+NGF+R
Sbjct: 12 KENGFIR 18


>sp|PYRG_METMP|CTP synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KKNGFVRSGL 10
KKNG + SG+
Sbjct: 476 KKNGLIISGM 485


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 KKNGFVRS 8
+KNGF RS
Sbjct: 312 EKNGFTRS 319


>sp|RL3_METS5|LARGE ribosomal subunit protein uL3|Metallosphaera sedula (strain ATCC

Query: 2 KNGFVRSGL 10
K GFVR GL
Sbjct: 285 KGGFVRYGL 293


>sp|MPGS_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KNGFVRSG 9
+NG +RSG
Sbjct: 137 ENGMIRSG 144


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 NGFVRSG 9
NGF+R G
Sbjct: 616 NGFIRVG 622


>sp|TYW3_AERPE|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 KKNGFVRSGL 10
++NGF SG+
Sbjct: 111 RRNGFKHSGV 120


>sp|TET_PYRHO|TETRAHEDRAL aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KKNGFVR 7
+KNGF+R
Sbjct: 80 EKNGFLR 86


>sp|ILVC_CALMQ|KETOL-ACID reductoisomerase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 1 KKNGFVRSGL 10
K NGF R G+
Sbjct: 169 KANGFTRVGV 178


>sp|AGLB2_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GFVRSGL 10
GFV+SG+
Sbjct: 284 GFVKSGI 290


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 1 KKNGFVRS 8
K +GFVRS
Sbjct: 785 KSHGFVRS 792


>sp|PRIS_THEON|DNA primase small subunit PriS|Thermococcus onnurineus (strain NA1)

Query: 4 GFVRSGL 10
GFVR GL
Sbjct: 243 GFVRKGL 249


>sp|ARCS_METJA|ARCHAEOSINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KNGFVRS 8
KNGF+R+
Sbjct: 219 KNGFLRN 225




87|SequenceR|440|431|LIKLQKKNGF

>sp|THS_METMP|CHAPERONIN subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 LIKLQKKNG 9
LIK++KK+G
Sbjct: 192 LIKIEKKSG 200


>sp|RNP1_SACS2|RIBONUCLEASE P protein component 1|Saccharolobus solfataricus (strain ATCC

Query: 1 LIKLQKKNGF 10
LIKL++KN F
Sbjct: 36 LIKLEEKNKF 45


>sp|MER_METKA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanopyrus kandleri (strain AV19 /

Query: 1 LIKLQKKNGF 10
LIK+ + NGF
Sbjct: 22 LIKVAEDNGF 31


>sp|ARCH_PYRAE|PROTEIN archease|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 IKLQKKNGF 10
+KL+K NG+
Sbjct: 91 VKLEKGNGY 99


>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 1 LIKLQKKNGF 10
LIK+ KNGF
Sbjct: 148 LIKIFHKNGF 157


>sp|THS_METTL|CHAPERONIN subunit|Methanothermococcus thermolithotrophicus

Query: 1 LIKLQKKNG 9
LIK++KK G
Sbjct: 194 LIKIEKKEG 202


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 LIKLQKKNG 9
+I +QKKNG
Sbjct: 554 VIDVQKKNG 562


>sp|THS_METKA|THERMOSOME subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 IKLQKKNG 9
IKL+KK G
Sbjct: 202 IKLEKKEG 209


>sp|HJC_PYRFU|CROSSOVER junction endodeoxyribonuclease Hjc|Pyrococcus furiosus (strain

Query: 1 LIKLQKKNGF 10
LIKL +K+GF
Sbjct: 12 LIKLLEKHGF 21


>sp|PIMT_META3|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LIKLQKKNG 9
LI L+KKNG
Sbjct: 183 LILLEKKNG 191


>sp|THS_METJA|THERMOSOME subunit|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIKLQKKNG 9
LIK++KK G
Sbjct: 196 LIKVEKKEG 204


>sp|SPEH_THEON|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus onnurineus (strain NA1)

Query: 3 KLQKKNG 9
KL++KNG
Sbjct: 131 KLERKNG 137


>sp|THS_PYRHO|THERMOSOME subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IKLQKKNG 9
IKL+KK G
Sbjct: 200 IKLEKKEG 207


>sp|THSA_SACSH|CHAPERONIN subunit alpha|Saccharolobus shibatae (strain ATCC 51178

Query: 1 LIKLQKKNG 9
LIK+ KK G
Sbjct: 204 LIKIDKKKG 212


>sp|THSA_SULAC|CHAPERONIN subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LIKLQKKNG 9
LIK+ KK G
Sbjct: 205 LIKIDKKKG 213




88|SequenceR|445|436|WMIDTLIKLQ

>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WMIDTLIK 8
W+++TLIK
Sbjct: 526 WLLETLIK 533


>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 1 WMIDTLIKL 9
+++DTLIK+
Sbjct: 660 FIVDTLIKI 668


>sp|Y941_METKA|UNCHARACTERIZED methyltransferase MK0941|Methanopyrus kandleri (strain AV19 /

Query: 1 WMIDTLIKL 9
W +++L+KL
Sbjct: 111 WEVESLVKL 119


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 1 WMIDTLI 7
W+ DTL+
Sbjct: 448 WLFDTLL 454


>sp|KADA_AERPE|ADENYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WMIDTLIKL 9
+M+DT +KL
Sbjct: 44 FMLDTAVKL 52




89|SequenceR|450|441|KAIIPWMIDT

>sp|TRPD_IGNH4|ANTHRANILATE phosphoribosyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 PWMID 9
PWM+D
Sbjct: 197 PWMLD 201


>sp|TRUA_PICTO|TRNA pseudouridine synthase A|Picrophilus torridus (strain ATCC 700027

Query: 1 KAIIPWMIDT 10
K IIP+ ID+
Sbjct: 111 KYIIPYRIDS 120


>sp|GUAAB_SULTO|GMP synthase [glutamine-hydrolyzing] subunit B|Sulfurisphaera

Query: 3 IIPWMIDT 10
+IP MIDT
Sbjct: 49 VIPVMIDT 56


>sp|Y1282_METJA|UPF0252 protein MJ1282|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IIPWMID 9
IIP+M+D
Sbjct: 252 IIPYMLD 258


>sp|RNP2_METM5|RIBONUCLEASE P protein component 2|Methanococcus maripaludis (strain C5 /

Query: 5 PWMID 9
PW+ID
Sbjct: 53 PWLID 57


>sp|RNP2_METVS|RIBONUCLEASE P protein component 2|Methanococcus vannielii (strain ATCC 35089

Query: 5 PWMID 9
PW+ID
Sbjct: 53 PWLID 57


>sp|RNP2_METM6|RIBONUCLEASE P protein component 2|Methanococcus maripaludis (strain C6 /

Query: 5 PWMID 9
PW+ID
Sbjct: 53 PWLID 57


>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 KAIIPWMI 8
K I PW +
Sbjct: 250 KTIFPWFV 257


>sp|RNP2_METMP|RIBONUCLEASE P protein component 2|Methanococcus maripaludis (strain DSM 14266

Query: 5 PWMID 9
PW+ID
Sbjct: 53 PWLID 57


>sp|RNP2_METM7|RIBONUCLEASE P protein component 2|Methanococcus maripaludis (strain C7 /

Query: 5 PWMID 9
PW+ID
Sbjct: 53 PWLID 57


>sp|PYRC_METST|DIHYDROOROTASE stadtmanae (strain ATCC 43021

Query: 3 IIPWMIDT 10
IIP +IDT
Sbjct: 51 IIPGLIDT 58


>sp|RNP2_META3|RIBONUCLEASE P protein component 2|Methanococcus aeolicus (strain ATCC

Query: 5 PWMID 9
PW+ID
Sbjct: 53 PWLID 57


>sp|YFUS_PYRWO|UNCHARACTERIZED 12.3 kDa protein in|Pyrococcus woesei

Query: 1 KAIIPWMI 8
+A+IP+MI
Sbjct: 59 RALIPYMI 66


>sp|KAD6_SACS2|PUTATIVE adenylate kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 IPWMIDT 10
I W++DT
Sbjct: 161 IEWLVDT 167


>sp|KAD6_SACI7|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 IPWMIDT 10
I W++DT
Sbjct: 161 IEWLVDT 167


>sp|KAD6_SACI6|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 IPWMIDT 10
I W++DT
Sbjct: 161 IEWLVDT 167


>sp|KAD6_SACI4|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 IPWMIDT 10
I W++DT
Sbjct: 161 IEWLVDT 167


>sp|KAD6_SACI1|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 IPWMIDT 10
I W++DT
Sbjct: 161 IEWLVDT 167




90|SequenceR|455|446|EERALKAIIP

>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ERALKAIIP 10
ER +KA+IP
Sbjct: 623 ERQMKAVIP 631


>sp|RS15_HYPBU|SMALL ribosomal subunit protein uS15|Hyperthermus butylicus (strain DSM

Query: 1 EERALKAIIP 10
EER +K ++P
Sbjct: 75 EERGIKMVVP 84


>sp|EF1B_PYRAB|ELONGATION factor 1-beta|Pyrococcus abyssi (strain GE5 /

Query: 2 ERALKAIIP 10
E LKA+IP
Sbjct: 25 EEKLKAVIP 33


>sp|HEM2_METSC|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermus sociabilis

Query: 1 EERALKAII 9
EE+ LKAI+
Sbjct: 69 EEKGLKAIL 77


>sp|EF1B_THEKO|ELONGATION factor 1-beta|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ERALKAIIP 10
E LKA+IP
Sbjct: 25 EEKLKAVIP 33


>sp|EF1B_THEON|ELONGATION factor 1-beta|Thermococcus onnurineus (strain NA1)

Query: 2 ERALKAIIP 10
E LKA+IP
Sbjct: 25 EEKLKAVIP 33


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 2 ERALKAIIP 10
E A+KA++P
Sbjct: 169 EEAIKALLP 177




91|SequenceR|460|451|VARDMEERAL

>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 ARDMEERA 9
ARDMEE+A
Sbjct: 85 ARDMEEKA 92


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 ARDMEERA 9
ARDMEE+A
Sbjct: 85 ARDMEEKA 92


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 ARDMEERA 9
ARDMEE+A
Sbjct: 85 ARDMEEKA 92


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 ARDMEERA 9
ARDMEE+A
Sbjct: 85 ARDMEEKA 92


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 ARDMEERA 9
ARDMEE+A
Sbjct: 85 ARDMEEKA 92


>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 ARDMEERA 9
ARDMEE+A
Sbjct: 85 ARDMEEKA 92


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain

Query: 2 ARDMEERA 9
AR+MEE+A
Sbjct: 85 ARNMEEKA 92


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VARDMEERAL 10
VARD +E+A+
Sbjct: 572 VARDKKEKAM 581


>sp|DNAK_METTP|CHAPERONE protein DnaK|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 ARDMEERAL 10
RDM+ER L
Sbjct: 204 GRDMDERLL 212


>sp|SRP54_THEAC|SIGNAL recognition particle 54 kDa|Thermoplasma acidophilum (strain ATCC

Query: 1 VARDMEERAL 10
V ++ME RAL
Sbjct: 52 VTKEMERRAL 61




92|SequenceR|465|456|RKGEAVARDM

>sp|SYE_NANEQ|GLUTAMATE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 RKGEAVAR 8
+KGEAV R
Sbjct: 221 KKGEAVVR 228


>sp|TOP6A_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RKGEAVARD 9
RKG+A+AR+
Sbjct: 10 RKGDALARE 18


>sp|Y948_METJA|UNCHARACTERIZED protein MJ0948|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KGEAVARDM 10
KGEA RD+
Sbjct: 26 KGEAKLRDL 34


>sp|SYE_PYRFU|GLUTAMATE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RKGEAVAR 8
R+GEAV R
Sbjct: 237 REGEAVVR 244


>sp|SYE_THEKO|GLUTAMATE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RKGEAVAR 8
R+GEAV R
Sbjct: 237 REGEAVVR 244




93|SequenceR|470|461|DIVCVRKGEA

>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DIVCVRKGE 9
D+VC+ +GE
Sbjct: 112 DVVCIGEGE 120


>sp|RNP3_NATPD|RIBONUCLEASE P protein component 3|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DIVCVRKGE 9
DIVCV GE
Sbjct: 81 DIVCVHGGE 89


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DIVCVRKGE 9
D +CV++GE
Sbjct: 874 DYLCVKEGE 882


>sp|Y1902_METTH|UPF0173 metal-dependent hydrolase MTH_1902|Methanothermobacter

Query: 1 DIVCVRKGEA 10
D++CV G A
Sbjct: 42 DVICVTHGHA 51


>sp|PCNA_THESM|DNA polymerase sliding clamp|Thermococcus sibiricus (strain DSM 12597

Query: 1 DIVCVRKGE 9
DI+ +RKGE
Sbjct: 87 DILVLRKGE 95


>sp|ENGB_ARCFU|PROBABLE GTP-binding protein EngB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VCVRKGE 9
VC +KGE
Sbjct: 166 VCAKKGE 172


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 3 VCVRKGEA 10
VC+R G A
Sbjct: 300 VCIRSGTA 307


>sp|Y421_METJA|UNCHARACTERIZED protein MJ0421|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IVCVRKGEA 10
IVC R GEA
Sbjct: 181 IVCKRFGEA 189


>sp|TRUD_HALMA|PROBABLE tRNA pseudouridine synthase D|Haloarcula marismortui (strain ATCC

Query: 1 DIVCVRKGEA 10
D+VC R +A
Sbjct: 327 DVVCFRDSDA 336


>sp|CARA_METTH|CARBAMOYL phosphate synthase small chain|Methanothermobacter

Query: 1 DIVCVRK 7
D+VCVR+
Sbjct: 159 DMVCVRE 165


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 CVRKGEA 10
CVRKG A
Sbjct: 294 CVRKGAA 300


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 3 VCVRKG 8
+CVRKG
Sbjct: 1008 LCVRKG 1013


>sp|TRPD_METMA|ANTHRANILATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DIVCVRKGE 9
D++C+ KG+
Sbjct: 275 DLLCIFKGQ 283


>sp|DHQS_METMP|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DIVCVRKGE 9
D+V + KGE
Sbjct: 57 DVVLINKGE 65


>sp|DHQS_METM6|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 DIVCVRKGE 9
D+V + KGE
Sbjct: 57 DVVLINKGE 65


>sp|DHQS_METM5|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 DIVCVRKGE 9
D+V + KGE
Sbjct: 57 DVVLINKGE 65


>sp|TRPD_METAC|ANTHRANILATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 DIVCVRKGE 9
D++C+ KG+
Sbjct: 275 DLLCIFKGQ 283


>sp|DHQS_METM7|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 DIVCVRKGE 9
D+V + KGE
Sbjct: 57 DVVLINKGE 65


>sp|TRPD_METBF|ANTHRANILATE phosphoribosyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DIVCVRKGE 9
D++C+ KG+
Sbjct: 272 DLLCIFKGQ 280


>sp|FOLD_PYRAE|BIFUNCTIONAL protein FolD|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DIVCVRKGE 9
D+V V KGE
Sbjct: 169 DVVVVGKGE 177




94|SequenceR|475|466|LLVAADIVCV

***** No hits found ******


95|SequenceR|480|471|QWGAELLVAA

>sp|GCH1L_HALSA|GTP cyclohydrolase 1 type 2|Halobacterium salinarum (strain ATCC

Query: 1 QWGAELLV 8
+WGA+LLV
Sbjct: 55 EWGADLLV 62


>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 2 WGAELLVAA 10
WG E+ VAA
Sbjct: 538 WGVEMPVAA 546


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WGAELLVAA 10
WG E+ VAA
Sbjct: 552 WGIEMPVAA 560


>sp|SYFB_METAR|PHENYLALANINE--TRNA ligase beta subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 WGAELLVAA 10
WG E+ VAA
Sbjct: 536 WGIEMPVAA 544


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 2 WGAELLVAA 10
WG E+ VAA
Sbjct: 550 WGIEMPVAA 558


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 WGAELLV 8
WGAEL++
Sbjct: 369 WGAELIL 375


>sp|GPT_SULAC|PUTATIVE UDP-N-acetylglucosamine--dolichyl-phosphate

Query: 2 WGAELLVA 9
WG E+L A
Sbjct: 308 WGIEILFA 315




96|SequenceR|485|476|EHVLNQWGAE

>sp|LEUC_PYRNV|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 HVLNQWGAE 10
H+L Q+GAE
Sbjct: 177 HLLKQFGAE 185


>sp|LEUC_PYRIL|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 2 HVLNQWGAE 10
H+L Q+GAE
Sbjct: 177 HLLKQFGAE 185


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HVLNQWGAE 10
H+L Q+GAE
Sbjct: 177 HLLGQFGAE 185


>sp|LEUC_PYRAE|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HVLNQWGAE 10
H+L Q+GAE
Sbjct: 177 HLLGQFGAE 185


>sp|TRMY_METTP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanothrix

Query: 1 EHVLNQWGAE 10
EH+L+ GAE
Sbjct: 158 EHLLDSMGAE 167


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 1 EHVLNQWGAE 10
EH++ Q GAE
Sbjct: 310 EHLIEQVGAE 319


>sp|G1PDH_IGNH4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 HVLNQWGAE 10
HV ++WG E
Sbjct: 44 HVWSEWGDE 52


>sp|PELO_ARCFU|PROTEIN pelota homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VLNQWGAE 10
VL QWG E
Sbjct: 145 VLRQWGVE 152


>sp|ILVC_METPE|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaerula palustris (strain ATCC

Query: 1 EHVLNQWGAE 10
EH+L + GAE
Sbjct: 310 EHLLEEVGAE 319


>sp|Y1653_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 2 HVLNQWGAE 10
H+LN++GA+
Sbjct: 310 HMLNRFGAK 318


>sp|RL40_PYRHO|LARGE ribosomal subunit protein eL40|Pyrococcus horikoshii (strain ATCC

Query: 5 NQWGAE 10
N WGAE
Sbjct: 24 NPWGAE 29


>sp|RL40_PYRAB|LARGE ribosomal subunit protein eL40|Pyrococcus abyssi (strain GE5 /

Query: 5 NQWGAE 10
N WGAE
Sbjct: 24 NPWGAE 29


>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EHVLNQWGAE 10
EH+ Q+G E
Sbjct: 75 EHIYRQFGPE 84


>sp|TRM56_THEKO|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermococcus kodakarensis

Query: 1 EHVLNQWGA 9
E V+N+WG
Sbjct: 51 EDVVNRWGG 59


>sp|PHAC_HALMA|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula marismortui (strain ATCC 43049

Query: 3 VLNQWGAE 10
VL +WG+E
Sbjct: 197 VLEEWGSE 204


>sp|PHAC_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula hispanica (strain ATCC 33960

Query: 3 VLNQWGAE 10
VL +WG+E
Sbjct: 197 VLEEWGSE 204


>sp|TRM56_METM7|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 1 EHVLNQWGAE 10
E ++ WG E
Sbjct: 48 ERIVESWGGE 57


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VLNQWGAE 10
+LN WG E
Sbjct: 1423 LLNFWGVE 1430


>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LNQWGAE 10
+ +WGAE
Sbjct: 239 IEEWGAE 245


>sp|SAHH_AERPE|ADENOSYLHOMOCYSTEINASE pernix (strain ATCC 700893

Query: 4 LNQWGAE 10
L +WGAE
Sbjct: 65 LRKWGAE 71


>sp|TRM56_METVS|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus vannielii

Query: 1 EHVLNQWGAE 10
E ++ WG E
Sbjct: 48 ERIVKSWGGE 57


>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 2 HVLNQWGAE 10
VL WG E
Sbjct: 533 QVLENWGVE 541


>sp|TRM56_METS5|TRNA (cytidine(56)-2'-O)-methyltransferase|Metallosphaera sedula

Query: 1 EHVLNQWGAE 10
E V+N WG +
Sbjct: 44 EDVINVWGGK 53




97|SequenceR|490|481|VATWVEHVLN

>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii

Query: 1 VATWVEHVLN 10
V+TWV+ +LN
Sbjct: 61 VSTWVKKILN 70


>sp|Y1566_ARCFU|UNCHARACTERIZED protein AF_1566|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TWVEHVLN 10
TWV+H LN
Sbjct: 66 TWVQHFLN 73


>sp|TRUB_METM6|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 1 VATWVEHVLN 10
VA WV ++LN
Sbjct: 46 VAAWVRNMLN 55


>sp|TRUB_METMP|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 1 VATWVEHVLN 10
VA WV ++LN
Sbjct: 46 VAAWVRNMLN 55


>sp|TRUB_METM7|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 1 VATWVEHVLN 10
VA WV ++LN
Sbjct: 46 VAAWVRNMLN 55


>sp|TRUB_METM5|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 1 VATWVEHVLN 10
VA WV ++LN
Sbjct: 46 VAAWVRNMLN 55


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM

Query: 3 TWVEHVL 9
TW EH+
Sbjct: 3 TWTEHIF 9


>sp|PSB2_SULAC|PROTEASOME subunit beta 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VATWVEHVLN 10
+ATW+ +VL+
Sbjct: 89 IATWLANVLS 98


>sp|NADM_METTI|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanolobus tindarius

Query: 2 ATWVEHVLN 10
A WV H+++
Sbjct: 80 AVWVSHIIS 88


>sp|DTDA_IGNH4|D-AMINOACYL-TRNA deacylase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VATWVEH 7
VA+W EH
Sbjct: 149 VASWEEH 155


>sp|TRUB_ARCFU|PROBABLE tRNA pseudouridine synthase B|Archaeoglobus fulgidus (strain ATCC

Query: 1 VATWVEHVLN 10
V WV +LN
Sbjct: 49 VVVWVRRILN 58


>sp|MDH_PYRAB|MALATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 2 ATWVEHVLN 10
TW +HV N
Sbjct: 262 GTWSKHVKN 270


>sp|TRUB_THEKO|PROBABLE tRNA pseudouridine synthase B|Thermococcus kodakarensis (strain

Query: 1 VATWVEHVLN 10
V WV+ +LN
Sbjct: 62 VVAWVKRILN 71


>sp|Y398_ARCFU|UNCHARACTERIZED protein AF_0398|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VATWVEHV 8
+ W+EHV
Sbjct: 131 IYAWIEHV 138


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ATWVEH 7
A+WV+H
Sbjct: 110 ASWVDH 115


>sp|CYAS_METPE|CYSTEATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 VATWVEH 7
VA W EH
Sbjct: 273 VAAWEEH 279


>sp|NADM_HALMA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ATWVEHV 8
A WV HV
Sbjct: 79 AVWVSHV 85


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VATWVEHV 8
+A W+ HV
Sbjct: 611 IAEWIMHV 618


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 1 VATWVEHV 8
+A W+ HV
Sbjct: 610 IAEWIMHV 617


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VATWVEHV 8
+A W+ HV
Sbjct: 611 IAEWIMHV 618


>sp|NADM_METTP|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 2 ATWVEHV 8
A WV HV
Sbjct: 80 AVWVSHV 86


>sp|TRUB_PYRAB|PROBABLE tRNA pseudouridine synthase B|Pyrococcus abyssi (strain GE5 /

Query: 1 VATWVEHVLN 10
V W++ +LN
Sbjct: 62 VVAWIKRILN 71


>sp|NADM_HALSA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ATWVEHV 8
A WV HV
Sbjct: 80 AVWVSHV 86


>sp|NADM_HALS3|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ATWVEHV 8
A WV HV
Sbjct: 80 AVWVSHV 86


>sp|DADD_METTP|5'-DEOXYADENOSINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VATWVEHVLN 10
VAT +EH +N
Sbjct: 271 VATLIEHGVN 280


>sp|TRUB_PYRFU|PROBABLE tRNA pseudouridine synthase B|Pyrococcus furiosus (strain ATCC

Query: 1 VATWVEHVLN 10
V W++ +LN
Sbjct: 62 VVAWIKKILN 71


>sp|TRUB_PYRHO|PROBABLE tRNA pseudouridine synthase B|Pyrococcus horikoshii (strain ATCC

Query: 1 VATWVEHVLN 10
V W++ +LN
Sbjct: 62 VVAWIKRILN 71


>sp|SYY_THESM|TYROSINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 VATWVEHVL 9
V W EH++
Sbjct: 289 VLDWAEHII 297


>sp|SYY_PYRAB|TYROSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 VATWVEHVL 9
V W EH++
Sbjct: 289 VLDWAEHII 297




98|SequenceR|495|486|ETEPIVATWV

>sp|PMDHS_METJA|PHOSPHOMEVALONATE dehydratase small subunit|Methanocaldococcus jannaschii (strain

Query: 1 ETEPIVAT 8
E EPIVAT
Sbjct: 84 ECEPIVAT 91


>sp|PMDHS_METMA|PHOSPHOMEVALONATE dehydratase small subunit|Methanosarcina mazei (strain ATCC

Query: 1 ETEPIVA 7
ETEPIVA
Sbjct: 89 ETEPIVA 95


>sp|ACDB2_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 1 ETEPIVATW 9
+ P+VATW
Sbjct: 393 KNHPVVATW 401


>sp|ACDB1_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 1 ETEPIVATW 9
+ P+VATW
Sbjct: 392 KNHPVVATW 400


>sp|ACDB1_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 ETEPIVATW 9
+ P+VATW
Sbjct: 392 KNHPVVATW 400


>sp|PMDHS_METAC|PHOSPHOMEVALONATE dehydratase small subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 ETEPIVA 7
ETEPIVA
Sbjct: 89 ETEPIVA 95


>sp|ACDB1_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 PIVATW 9
P+VATW
Sbjct: 395 PVVATW 400


>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 PIVATW 9
P+VATW
Sbjct: 395 PVVATW 400


>sp|SYC_METAC|CYSTEINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 EPIVATWV 10
+P V TW+
Sbjct: 252 KPFVCTWI 259


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 TEPIVATWV 10
TEP+VAT +
Sbjct: 318 TEPLVATGL 326


>sp|TRPE1_HALMA|ANTHRANILATE synthase component 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 ETEPIVAT 8
ETEPI T
Sbjct: 291 ETEPIAGT 298


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 1 ETEPIVATWV 10
E EP +A W+
Sbjct: 692 ELEPEIARWL 701


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 1 ETEPIVATWV 10
E EP +A W+
Sbjct: 693 ELEPEIARWL 702


>sp|COXX_HYPBU|PROTOHEME IX farnesyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 5 IVATWV 10
IVATWV
Sbjct: 175 IVATWV 180


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ETEPIVATWV 10
+ PI+A W+
Sbjct: 410 DISPIMADWI 419


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 ETEPIVATW 9
E P+VA W
Sbjct: 81 EPRPVVARW 89


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 ETEPIVATW 9
E P+VA W
Sbjct: 77 EPRPVVARW 85


>sp|ACDB2_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 ETEPIVATW 9
+ P+VA W
Sbjct: 392 KNHPVVANW 400


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ETEPIVATW 9
E P+VA W
Sbjct: 82 ERYPVVARW 90




99|SequenceR|500|491|IRRVAETEPI

>sp|DPHB_PYRAE|DIPHTHINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IRRVAETEPI 10
+RR+A EPI
Sbjct: 42 LRRLARGEPI 51


>sp|NADM_HALLT|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 IRRVAETE 8
IRR+AET+
Sbjct: 160 IRRIAETD 167


>sp|VORA_METTH|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter thermautotrophicus

Query: 3 RVAETEPI 10
R AETEP+
Sbjct: 255 RSAETEPL 262


>sp|DPHB_PYRCJ|DIPHTHINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 IRRVAETEPI 10
+RR A+T PI
Sbjct: 42 LRRAAKTPPI 51


>sp|PDXS_PYRFU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus furiosus (strain ATCC

Query: 2 RRVAETEPI 10
+RV E EPI
Sbjct: 214 KRVLENEPI 222


>sp|PDXS_PYRHO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus horikoshii (strain

Query: 2 RRVAETEPI 10
+RV E EPI
Sbjct: 214 KRVLENEPI 222


>sp|PDXS_PYRAB|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus abyssi (strain GE5 /

Query: 2 RRVAETEPI 10
+RV E EPI
Sbjct: 214 KRVLENEPI 222


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RRVAETEPI 10
RR+ ETE I
Sbjct: 413 RRIKETEKI 421


>sp|PELO_PYRHO|PROTEIN pelota homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IRRVAETEPI 10
I R+A+ EP+
Sbjct: 271 IERIAKDEPV 280


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 1 IRRVAETEPI 10
I R+A+ EP+
Sbjct: 271 IERIAKDEPV 280




100|SequenceR|505|496|GDREVIRRVA

>sp|HIS7_METKA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 1 GDREVIRRVA 10
GDRE IRR+A
Sbjct: 86 GDREGIRRIA 95


>sp|PRIL_THEAC|DNA primase large subunit PriL|Thermoplasma acidophilum (strain ATCC

Query: 2 DREVIRRVA 10
DRE+IRR+A
Sbjct: 11 DRELIRRIA 19


>sp|GLMS_THEKO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Thermococcus kodakarensis (strain

Query: 1 GDREVIRRVA 10
G+RE+IR VA
Sbjct: 272 GNREIIRSVA 281


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 REVIRRV 9
REVIRR+
Sbjct: 963 REVIRRI 969


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus aeolicus

Query: 2 DREVIRRVA 10
DRE IRR+A
Sbjct: 112 DREGIRRLA 120


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 REVIRRV 9
REVIRR+
Sbjct: 975 REVIRRI 981


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 REVIRRV 9
RE+IRR+
Sbjct: 949 REIIRRI 955


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 REVIRRV 9
REV+RR+
Sbjct: 956 REVVRRI 962


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 REVIRRV 9
REVIRR+
Sbjct: 975 REVIRRI 981


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus vannielii

Query: 2 DREVIRRVA 10
DRE IRR+A
Sbjct: 111 DREGIRRLA 119


>sp|PURT_METMP|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 2 DREVIRRVA 10
DRE IRR+A
Sbjct: 111 DREGIRRLA 119


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDREVIR 7
GDREVI+
Sbjct: 436 GDREVIK 442


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 REVIRRV 9
REVIRR+
Sbjct: 961 REVIRRI 967


>sp|PURT_METM7|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 2 DREVIRRVA 10
DRE IRR+A
Sbjct: 111 DREGIRRLA 119


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 2 DREVIRRVA 10
D EVIRR++
Sbjct: 521 DEEVIRRIS 529


>sp|FOLD_NATPD|BIFUNCTIONAL protein FolD|Natronomonas pharaonis (strain ATCC 35678

Query: 3 REVIRRV 9
REVIRRV
Sbjct: 106 REVIRRV 112


>sp|AROA_METMP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 GDREVIRRV 9
GDRE+I V
Sbjct: 269 GDREIIEIV 277


>sp|AROA_METM5|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 GDREVIRRV 9
GDRE+I V
Sbjct: 269 GDREIIEIV 277


>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 2 DREVIRRVA 10
+RE+IRR+A
Sbjct: 112 NRELIRRLA 120


>sp|AROA_METM6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 GDREVIRRV 9
GDRE+I V
Sbjct: 269 GDREIIEIV 277


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 REVIRRV 9
REVIRRV
Sbjct: 981 REVIRRV 987


>sp|AROA_METM7|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 GDREVIRRV 9
GDRE+I V
Sbjct: 269 GDREIIEIV 277


>sp|PURT_METM5|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 2 DREVIRRVA 10
DRE IRR+A
Sbjct: 111 DREGIRRLA 119


>sp|AKSA_METKA|HOMOCITRATE synthase AksA|Methanopyrus kandleri (strain AV19 /

Query: 1 GDREVIRRVA 10
G+R+ +RR+A
Sbjct: 67 GERDAVRRIA 76


>sp|GLME_HALSA|GLUTAMATE mutase epsilon subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 GDREVIRRV 9
G REV+RRV
Sbjct: 130 GCREVVRRV 138


>sp|AROA_METVS|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 GDREVIRRV 9
GDRE+I V
Sbjct: 269 GDREIIEIV 277


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 REVIRRV 9
REVIRR+
Sbjct: 983 REVIRRI 989


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 REVIRRV 9
REV+RRV
Sbjct: 993 REVVRRV 999


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GDREVIRRVA 10
D E +RRVA
Sbjct: 47 SDEEFLRRVA 56


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 REVIRRV 9
REVIRR+
Sbjct: 969 REVIRRI 975


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 REVIRRV 9
REVIRR+
Sbjct: 942 REVIRRI 948


>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 2 DREVIRRV 9
DREV+R V
Sbjct: 407 DREVLRSV 414


>sp|HIS7_METTH|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GDREVIRRVA 10
GD+ IRR+A
Sbjct: 86 GDKSGIRRMA 95




101|SequenceR|510|501|AAESLGDREV

>sp|UPPP_HALMA|UNDECAPRENYL-DIPHOSPHATASE marismortui (strain ATCC 43049

Query: 1 AAESLGDREV 10
AA SLG+RE+
Sbjct: 140 AALSLGEREI 149


>sp|RS8_CALMQ|SMALL ribosomal subunit protein uS8|Caldivirga maquilingensis (strain

Query: 2 AESLGDREV 10
AES GDR+V
Sbjct: 17 AESRGDRQV 25


>sp|HACA_METTH|PROBABLE methanogen homoaconitase large subunit|Methanothermobacter

Query: 1 AAESLGDREV 10
AAE +GDR V
Sbjct: 315 AAEVIGDRRV 324


>sp|HIS1_ARCFU|ATP phosphoribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 3 ESLGDREV 10
E +GDREV
Sbjct: 70 EKVGDREV 77


>sp|HIS7_METKA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 3 ESLGDRE 9
E+LGDRE
Sbjct: 83 EALGDRE 89


>sp|Y963_METJA|UNCHARACTERIZED protein MJ0963|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ESLGDREV 10
E GDREV
Sbjct: 202 EKYGDREV 209


>sp|SYH_ARCFU|HISTIDINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AESLGDREV 10
AES G REV
Sbjct: 31 AESFGYREV 39


>sp|Y408_ARCFU|UNCHARACTERIZED protein AF_0408|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ESLGDRE 9
ESLGD+E
Sbjct: 102 ESLGDKE 108


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ESLGDREV 10
E+LGD E+
Sbjct: 776 ETLGDNEI 783




102|SequenceR|515|506|LRSQAAAESL

>sp|ENDA_METBU|TRNA-SPLICING endonuclease|Methanococcoides burtonii (strain DSM 6242

Query: 1 LRSQAAAESL 10
LRS AAAE++
Sbjct: 132 LRSLAAAENV 141




103|SequenceR|520|511|SMQSQLRSQA

***** No hits found ******


104|SequenceR|525|516|VLQQGSMQSQ

***** No hits found ******


105|SequenceR|530|521|VHSQEVLQQG

>sp|TRUB_HALMA|PROBABLE tRNA pseudouridine synthase B|Haloarcula marismortui (strain ATCC

Query: 1 VHSQEVLQQG 10
+HS ++L+QG
Sbjct: 144 IHSLDILEQG 153




106|SequenceR|535|526|LTSLVVHSQE

***** No hits found ******


107|SequenceR|540|531|IHPEWLTSLV

>sp|LYSJ_PYRFU|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 HPEWLTSL 9
HPEW++ L
Sbjct: 42 HPEWVSEL 49


>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain ATCC

Query: 1 IHPEW 5
IHPEW
Sbjct: 303 IHPEW 307


>sp|DPHB_METBF|DIPHTHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 HPEWLT 7
HP+WL+
Sbjct: 65 HPDWLS 70


>sp|Y646_METJA|UPF0305 protein MJ0646|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IHPEWLT 7
+HPE+LT
Sbjct: 117 LHPEYLT 123


>sp|LYSJ_THEKO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 HPEWLTSL 9
HPEW+ +
Sbjct: 42 HPEWVLDM 49


>sp|LYSJ_PYRHO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 HPEWLTSL 9
HPEW+ +
Sbjct: 42 HPEWVEGI 49


>sp|DPHB_METMA|DIPHTHINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HPEWL 6
HP+WL
Sbjct: 65 HPDWL 69


>sp|ADEC_ARCFU|ADENINE deaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HPEWLTSLV 10
HPEW V
Sbjct: 354 HPEWAKKTV 362


>sp|MOAA_HALWD|PROBABLE GTP 3',8-cyclase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 HPEW 5
HPEW
Sbjct: 197 HPEW 200


>sp|MOAA_HALSA|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 2 HPEW 5
HPEW
Sbjct: 197 HPEW 200


>sp|MOAA_HALS3|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 2 HPEW 5
HPEW
Sbjct: 197 HPEW 200


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 HPEWL 6
HPEW
Sbjct: 305 HPEWF 309


>sp|Y727_METTH|UPF0280 protein MTH_727|Methanothermobacter thermautotrophicus (strain

Query: 2 HPEWLTSL 9
+PE+LTSL
Sbjct: 57 NPEFLTSL 64


>sp|RL3_THEAC|LARGE ribosomal subunit protein uL3|Thermoplasma acidophilum (strain ATCC

Query: 2 HPEWLTSLV 10
HP+W+ + V
Sbjct: 233 HPDWVRNTV 241


>sp|RL3_PICTO|LARGE ribosomal subunit protein uL3|Picrophilus torridus (strain ATCC

Query: 2 HPEWLTSLV 10
HP+W+ + V
Sbjct: 231 HPDWVRNTV 239


>sp|Y2058_ARCFU|UNCHARACTERIZED protein AF_2058|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HPEW 5
HPEW
Sbjct: 178 HPEW 181


>sp|RL3_THEVO|LARGE ribosomal subunit protein uL3|Thermoplasma volcanium (strain ATCC

Query: 2 HPEWLTSLV 10
HP+W+ + V
Sbjct: 233 HPDWVRNTV 241


>sp|Y1477_METJA|UNCHARACTERIZED protein MJ1477|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HPEW 5
HPEW
Sbjct: 165 HPEW 168


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 2 HPEW 5
HPEW
Sbjct: 297 HPEW 300


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 2 HPEWL 6
HP+W+
Sbjct: 230 HPDWI 234


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 HPEW 5
HPEW
Sbjct: 437 HPEW 440


>sp|Y1385_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 2 HPEWLTSL 9
PEW+T +
Sbjct: 27 EPEWMTKI 34




108|SequenceR|545|536|VQRQTIHPEW

>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain ATCC

Query: 5 TIHPEW 10
TIHPEW
Sbjct: 302 TIHPEW 307


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 1 VQRQTIHPEW 10
V+RQ I PEW
Sbjct: 283 VRRQVIPPEW 292


>sp|MVHD_METTH|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 1 VQRQTIHPEW 10
+ R+ IH +W
Sbjct: 97 IGRERIHHDW 106


>sp|MVHD_METTM|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter marburgensis

Query: 1 VQRQTIHPEW 10
+ R+ IH +W
Sbjct: 97 IGRERIHHDW 106




109|SequenceR|550|541|AWAKEVQRQT

>sp|HIS6_SULAC|IMIDAZOLE glycerol phosphate synthase subunit|Sulfolobus acidocaldarius

Query: 1 AWAKEVQR 8
+WAKEV++
Sbjct: 155 SWAKEVEK 162


>sp|HIS6_THEON|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus onnurineus (strain

Query: 2 WAKEVQR 8
WAKEV+R
Sbjct: 156 WAKEVER 162


>sp|RNZ_PYRHO|RIBONUCLEASE Z|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WAKEVQRQ 9
W KE++RQ
Sbjct: 171 WMKELERQ 178


>sp|HIS6_SULTO|IMIDAZOLE glycerol phosphate synthase subunit|Sulfurisphaera tokodaii (strain

Query: 2 WAKEVQR 8
WAKEV++
Sbjct: 156 WAKEVEK 162


>sp|HIS6_PYRAE|IMIDAZOLE glycerol phosphate synthase subunit|Pyrobaculum aerophilum (strain

Query: 2 WAKEVQ 7
WAKEV+
Sbjct: 159 WAKEVE 164




110|SequenceR|555|546|RKQLLAWAKE

>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKQLLAWAKE 10
RK+L W KE
Sbjct: 447 RKKLFLWFKE 456


>sp|HIS6_METHJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanospirillum hungatei JF-1

Query: 5 LAWAKE 10
+AWAKE
Sbjct: 171 IAWAKE 176


>sp|MTAD_HALSA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Halobacterium salinarum (strain ATCC 700922

Query: 2 KQLLAWAKE 10
KQL AW +E
Sbjct: 76 KQLDAWLQE 84


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 RKQLLAWAKE 10
+K+L AWA E
Sbjct: 23 KKELAAWANE 32




111|SequenceR|564|551|DLAQHTKPIRKQLL

>sp|DTDA_PYRCJ|D-AMINOACYL-TRNA deacylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 QHTKPIRKQLL 14
+HT PIR+ +L
Sbjct: 213 KHTVPIRRAIL 223


>sp|KTHY_THEVO|PROBABLE thymidylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DLAQHTKPIRKQL 13
D +H K IRK+L
Sbjct: 58 DRYKHQKEIRKKL 70


>sp|AATD_HALSA|A-TYPE ATP synthase subunit D|Halobacterium salinarum (strain ATCC

Query: 2 LAQHTKPIRKQLL 14
+AQ KP RK L+
Sbjct: 1 MAQDIKPTRKNLM 13


>sp|AATD_HALS3|A-TYPE ATP synthase subunit D|Halobacterium salinarum (strain ATCC 29341

Query: 2 LAQHTKPIRKQLL 14
+AQ KP RK L+
Sbjct: 1 MAQDIKPTRKNLM 13


>sp|CHEF2_HALS3|TAXIS protein CheF2|Halobacterium salinarum (strain ATCC 29341

Query: 1 DLAQHTKPIRKQLL 14
D A H +P+R +++
Sbjct: 16 DTATHVEPVRGRVV 29


>sp|DTDA_PYRAR|D-AMINOACYL-TRNA deacylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LAQHTKPIRKQLL 14
L +HT PI++ +L
Sbjct: 212 LRKHTVPIKRAIL 224


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 1 DLAQHTKP 8
D+ QHT P
Sbjct: 399 DMQQHTNP 406


>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 LAQHTKPIRK 11
LA+H+KP +K
Sbjct: 341 LAKHSKPPQK 350


>sp|ARGC_METST|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 QHTKPIRKQL 13
+HT IR+QL
Sbjct: 205 RHTPEIREQL 214


>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 2 LAQHTKPIRKQLL 14
L+Q TKP + Q+L
Sbjct: 462 LSQMTKPGKIQIL 474


>sp|DTDA_PYRIL|D-AMINOACYL-TRNA deacylase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 QHTKPIRKQLL 14
+HT PI + +L
Sbjct: 214 KHTTPIERAIL 224


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 4 QHTKPIRKQL 13
Q KP+ KQL
Sbjct: 746 QMAKPLEKQL 755


>sp|Y3270_HALS3|UNCHARACTERIZED solute-binding protein OE_3270R|Halobacterium salinarum (strain

Query: 1 DLAQHTKPIRKQLL 14
D A TKP QLL
Sbjct: 181 DPATVTKPSESQLL 194


>sp|Y1595_HALSA|UNCHARACTERIZED solute-binding protein VNG_1595C|Halobacterium salinarum (strain

Query: 1 DLAQHTKPIRKQLL 14
D A TKP QLL
Sbjct: 181 DPATVTKPSESQLL 194


>sp|GRPE_PICTO|PROTEIN GrpE|Picrophilus torridus (strain ATCC 700027

Query: 7 KPIRKQLL 14
KPIR QL+
Sbjct: 103 KPIRSQLI 110


>sp|TF2B_SACSH|TRANSCRIPTION initiation factor IIB|Saccharolobus shibatae (strain ATCC 51178

Query: 1 DLAQHTKPIRKQL 13
++AQ+TK RK++
Sbjct: 182 EIAQYTKANRKEV 194


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 1 DLAQHTKPIRKQL 13
++AQ+TK RK++
Sbjct: 185 EIAQYTKANRKEV 197


>sp|AMPD_PYRHO|ANHYDROMEVALONATE phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DLAQHTKPIRKQL 13
DL KP++K+L
Sbjct: 15 DLVVIDKPVKKEL 27


>sp|CHMU_METJA|CHORISMATE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LAQHTKPIRKQLL 14
L +H K ++KQ L
Sbjct: 78 LIEHNKALQKQYL 90




THE END