COASY_HUMAN Blast Output
Archaea
1|Sequence|1|10|MAVFRSGLLV

>sp|TRPB1_THEKO|TRYPTOPHAN synthase beta chain 1|Thermococcus kodakarensis (strain ATCC

Query: 1 MAVFRSGLL 9
M VFR GLL
Sbjct: 142 MNVFRMGLL 150


>sp|SECD_METKA|PROTEIN-EXPORT membrane protein SecD|Methanopyrus kandleri (strain AV19 /

Query: 1 MAVFRSGLL 9
MAV RSG L
Sbjct: 217 MAVLRSGQL 225




2|Sequence|6|15|SGLLVLTTPL

>sp|RS8_METKA|SMALL ribosomal subunit protein uS8|Methanopyrus kandleri (strain AV19 /

Query: 2 GLLVLTTP 9
GLL++TTP
Sbjct: 100 GLLIVTTP 107


>sp|RS8_METBU|SMALL ribosomal subunit protein uS8|Methanococcoides burtonii (strain DSM

Query: 2 GLLVLTTP 9
G+L+LTTP
Sbjct: 100 GVLILTTP 107


>sp|RPO3_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum calidifontis (strain DSM

Query: 2 GLLVLTTPL 10
GL+ LTTPL
Sbjct: 64 GLIPLTTPL 72


>sp|RPO3_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum aerophilum (strain ATCC

Query: 2 GLLVLTTPL 10
GL+ LTTPL
Sbjct: 64 GLIPLTTPL 72


>sp|RPO3_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum arsenaticum (strain DSM

Query: 2 GLLVLTTPL 10
GL+ LTTPL
Sbjct: 64 GLIPLTTPL 72


>sp|RPO3_PYRNV|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum neutrophilum (strain DSM

Query: 2 GLLVLTTPL 10
GL+ LTTPL
Sbjct: 64 GLIPLTTPL 72


>sp|XPB1_SULTO|DNA 3'-5' helicase/translocase StoXPB1|Sulfurisphaera tokodaii (strain

Query: 1 SGLLVLTT 8
SG+LVLTT
Sbjct: 457 SGILVLTT 464


>sp|RS8_AERPE|SMALL ribosomal subunit protein uS8|Aeropyrum pernix (strain ATCC 700893

Query: 2 GLLVLTTP 9
GLL+L+TP
Sbjct: 103 GLLILSTP 110


>sp|RPO3_PYRIL|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum islandicum (strain DSM

Query: 2 GLLVLTTPL 10
GL+ LTTPL
Sbjct: 64 GLVPLTTPL 72


>sp|RS8_METST|SMALL ribosomal subunit protein uS8|Methanosphaera stadtmanae (strain

Query: 2 GLLVLTTP 9
G+L++TTP
Sbjct: 100 GILIVTTP 107


>sp|RS8_METS3|SMALL ribosomal subunit protein uS8|Methanobrevibacter smithii (strain

Query: 2 GLLVLTTP 9
G+L++TTP
Sbjct: 100 GILIVTTP 107


>sp|DNLI_METM7|DNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 SGLLVLTTPL 10
S LL+L TP+
Sbjct: 143 SNLLILATPV 152


>sp|RS8_METVS|SMALL ribosomal subunit protein uS8|Methanococcus vannielii (strain ATCC

Query: 2 GLLVLTTP 9
GLL+++TP
Sbjct: 100 GLLIVSTP 107


>sp|RS8_METVO|SMALL ribosomal subunit protein uS8|Methanococcus voltae

Query: 2 GLLVLTTP 9
GLL+++TP
Sbjct: 100 GLLIVSTP 107


>sp|RS8_METVA|SMALL ribosomal subunit protein uS8|Methanococcus vannielii

Query: 2 GLLVLTTP 9
GLL+++TP
Sbjct: 100 GLLIVSTP 107


>sp|RS8_METTL|SMALL ribosomal subunit protein uS8|Methanothermococcus

Query: 2 GLLVLTTP 9
GLL+++TP
Sbjct: 100 GLLIVSTP 107


>sp|RS8_METMP|SMALL ribosomal subunit protein uS8|Methanococcus maripaludis (strain DSM

Query: 2 GLLVLTTP 9
GLL+++TP
Sbjct: 100 GLLIVSTP 107


>sp|RS8_METM7|SMALL ribosomal subunit protein uS8|Methanococcus maripaludis (strain C7

Query: 2 GLLVLTTP 9
GLL+++TP
Sbjct: 100 GLLIVSTP 107


>sp|RS8_METM6|SMALL ribosomal subunit protein uS8|Methanococcus maripaludis (strain C6

Query: 2 GLLVLTTP 9
GLL+++TP
Sbjct: 100 GLLIVSTP 107


>sp|RS8_METM5|SMALL ribosomal subunit protein uS8|Methanococcus maripaludis (strain C5

Query: 2 GLLVLTTP 9
GLL+++TP
Sbjct: 100 GLLIVSTP 107


>sp|RS8_META3|SMALL ribosomal subunit protein uS8|Methanococcus aeolicus (strain ATCC

Query: 2 GLLVLTTP 9
GLL+++TP
Sbjct: 100 GLLIVSTP 107


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 2 GLLVLTTP 9
GLLV+ TP
Sbjct: 629 GLLVIDTP 636


>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 GLLVLTTP 9
GLLV+ TP
Sbjct: 71 GLLVIDTP 78


>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GLLVLTTP 9
GLLV+ TP
Sbjct: 375 GLLVILTP 382


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii

Query: 2 GLLVLTTP 9
GLLV+ TP
Sbjct: 71 GLLVIDTP 78


>sp|AROA_METM6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C6 /

Query: 4 LVLTTPL 10
+VLTTPL
Sbjct: 184 IVLTTPL 190


>sp|RPO3_NATPD|DNA-DIRECTED RNA polymerase subunit Rpo3|Natronomonas pharaonis (strain ATCC

Query: 2 GLLVLTTP 9
GL+ LTTP
Sbjct: 67 GLVPLTTP 74


>sp|RPO3_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo3|Halobacterium salinarum (strain ATCC

Query: 2 GLLVLTTP 9
GL+ LTTP
Sbjct: 68 GLVPLTTP 75


>sp|RPO3_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo3|Halobacterium salinarum (strain ATCC

Query: 2 GLLVLTTP 9
GL+ LTTP
Sbjct: 68 GLVPLTTP 75


>sp|RS8_STAMF|SMALL ribosomal subunit protein uS8|Staphylothermus marinus (strain ATCC

Query: 2 GLLVLTTP 9
G+L+L+TP
Sbjct: 103 GILILSTP 110


>sp|AROA_METM5|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C5 /

Query: 4 LVLTTPL 10
+VLTTPL
Sbjct: 184 IVLTTPL 190


>sp|DGGGP_SULAC|DIGERANYLGERANYLGLYCERYL phosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GLLVLTTPL 10
G+L+ T+PL
Sbjct: 208 GILIFTSPL 216


>sp|RS8_THEPD|SMALL ribosomal subunit protein uS8|Thermofilum pendens (strain DSM 2475

Query: 2 GLLVLTTP 9
GLL+++TP
Sbjct: 99 GLLIVSTP 106


>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 2 GLLVLTTP 9
GLLVL TP
Sbjct: 111 GLLVLLTP 118


>sp|AROA_METVS|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus vannielii (strain ATCC

Query: 4 LVLTTPL 10
++LTTPL
Sbjct: 184 IILTTPL 190




3|Sequence|11|20|LTTPLASLAP

>sp|HTR13_HALS3|TRANSDUCER protein Htr13|Halobacterium salinarum (strain ATCC 29341

Query: 2 TTPLASLAP 10
+TP+ASL P
Sbjct: 16 STPVASLRP 24


>sp|SECG_SULTO|PREPROTEIN translocase subunit SecG|Sulfurisphaera tokodaii (strain DSM

Query: 2 TTPLASLA 9
T PLAS+A
Sbjct: 10 TVPLASMA 17




4|Sequence|16|25|ASLAPRLASI

>sp|NUCS_SULAC|ENDONUCLEASE NucS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ASLAPRLASI 10
ASL+PRL I
Sbjct: 43 ASLSPRLTII 52


>sp|FLUC1_NATPD|FLUORIDE-SPECIFIC ion channel FluC 1|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SLAPRLASI 10
+LAPRLA++
Sbjct: 87 ALAPRLAAL 95




5|Sequence|21|30|RLASILTSAA

***** No hits found ******


6|Sequence|26|35|LTSAARLVNH

>sp|Y531_METTH|UNCHARACTERIZED protein MTH_531|Methanothermobacter thermautotrophicus (strain

Query: 4 AARLVNH 10
AARL+NH
Sbjct: 19 AARLLNH 25




7|Sequence|31|40|RLVNHTLYVH

>sp|GSA_THEAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RLVNHTLYV 9
RL+NH +YV
Sbjct: 378 RLMNHGVYV 386


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19 /

Query: 1 RLVNHTLYVH 10
R V+H +Y H
Sbjct: 386 REVDHVMYTH 395


>sp|DEOC_METAR|DEOXYRIBOSE-PHOSPHATE aldolase|Methanocella arvoryzae (strain DSM 22066

Query: 1 RLVNHTL 7
RL++HTL
Sbjct: 8 RLIDHTL 14


>sp|TRUD_NANEQ|PROBABLE tRNA pseudouridine synthase D|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 RLVNHTLYVH 10
RLVNH + H
Sbjct: 155 RLVNHLIGKH 164


>sp|KDGA_SULAC|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RLVNHTLYVH 10
R+ +H+LY++
Sbjct: 120 RISSHSLYIY 129


>sp|KMT_SACI5|PROTEIN-LYSINE N-methyltransferase|Saccharolobus islandicus (strain REY15A)

Query: 3 VNHTLYVH 10
+NHT+Y++
Sbjct: 148 MNHTVYLY 155


>sp|KAE1_PYRAR|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum arsenaticum

Query: 1 RLVNHTLYVH 10
+L++H LY H
Sbjct: 54 QLLSHLLYRH 63




8|Sequence|36|45|TLYVHLQPGM

>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain

Query: 1 TLYVHLQPG 9
T ++HL+PG
Sbjct: 60 TYHLHLRPG 68


>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LYVHLQPG 9
L+ HLQP
Sbjct: 147 LFTHLQPA 154


>sp|ARLY_HALMA|ARGININOSUCCINATE lyase|Haloarcula marismortui (strain ATCC 43049

Query: 3 YVHLQPG 9
Y HLQP
Sbjct: 163 YTHLQPA 169


>sp|RL40_METHJ|LARGE ribosomal subunit protein eL40|Methanospirillum hungatei JF-1

Query: 3 YVHLQP 8
YVHL+P
Sbjct: 36 YVHLRP 41


>sp|DUT_METBU|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanococcoides

Query: 3 YVHLQPGM 10
++HL PG+
Sbjct: 73 WIHLDPGV 80


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 5 HLQPGM 10
HL PGM
Sbjct: 276 HLMPGM 281


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 5 HLQPGM 10
HL PGM
Sbjct: 270 HLMPGM 275


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 3 YVHLQPG 9
YVH +PG
Sbjct: 194 YVHGEPG 200


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 TLYVHLQPG 9
TLYV PG
Sbjct: 401 TLYVSATPG 409


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 1 TLYVHLQPG 9
TLYV PG
Sbjct: 402 TLYVSATPG 410


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 1 TLYVHLQPG 9
TLYV PG
Sbjct: 402 TLYVSATPG 410


>sp|KPTA_PYRAE|PROBABLE RNA 2'-phosphotransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 YVHLQP 8
YVHL P
Sbjct: 148 YVHLSP 153


>sp|THIL_METTH|THIAMINE-MONOPHOSPHATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 YVHLQPG 9
Y HL PG
Sbjct: 321 YEHLSPG 327




9|Sequence|41|50|LQPGMSLEGP

>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 2 QPGMSLEGP 10
+PGM++ GP
Sbjct: 196 RPGMAVOGP 204


>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQPGMSLEGP 10
L+PG EGP
Sbjct: 641 LKPGAIFEGP 650


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 2 QPGMSLEGP 10
+PGM + GP
Sbjct: 196 RPGMGIOGP 204


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 2 QPGMSLEGP 10
+PGM + GP
Sbjct: 196 RPGMGVOGP 204


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 2 QPGMSLEGP 10
+PGM + GP
Sbjct: 196 RPGMGVOGP 204


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 2 QPGMSLEGP 10
+PGM + GP
Sbjct: 196 RPGMGVOGP 204


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 2 QPGMSLEGP 10
+PGM + GP
Sbjct: 196 RPGMGVOGP 204


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 2 QPGMSLEGP 10
+PGM + GP
Sbjct: 196 RPGMGVOGP 204


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QPGMSLEGP 10
+PGM + GP
Sbjct: 196 RPGMGIOGP 204


>sp|ALR_METMP|ALANINE racemase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LQPGMSLE 8
LQP MSL+
Sbjct: 242 LQPAMSLK 249


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 3 PGMSLEG 9
PG+SLEG
Sbjct: 177 PGVSLEG 183


>sp|IF2P_METBU|PROBABLE translation initiation factor IF-2|Methanococcoides burtonii

Query: 1 LQPGMSLEGP 10
++ MS+EGP
Sbjct: 526 MEVAMSIEGP 535


>sp|TF2B6_HALSA|TRANSCRIPTION initiation factor IIB 6|Halobacterium salinarum (strain ATCC 700922

Query: 1 LQPGMSLEG 9
L PG S+EG
Sbjct: 168 LLPGRSIEG 176


>sp|Y2125_METS5|UPF0173 metal-dependent hydrolase Msed_2125|Metallosphaera sedula (strain

Query: 1 LQPGMSLE 8
LQPG S+E
Sbjct: 218 LQPGQSIE 225


>sp|TF2B2_HALSA|TRANSCRIPTION initiation factor IIB 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 LQPGMSLEG 9
L PG S+EG
Sbjct: 175 LLPGRSIEG 183


>sp|TF2B2_HALVD|TRANSCRIPTION initiation factor IIB 2|Haloferax volcanii (strain ATCC 29605

Query: 1 LQPGMSLEG 9
L PG S+EG
Sbjct: 180 LLPGRSIEG 188


>sp|EF1A_METS5|ELONGATION factor 1-alpha|Metallosphaera sedula (strain ATCC 51363

Query: 1 LQPGMSLEG 9
+ GMSLEG
Sbjct: 122 FESGMSLEG 130


>sp|TF2B4_HALSA|TRANSCRIPTION initiation factor IIB 4|Halobacterium salinarum (strain ATCC 700922

Query: 1 LQPGMSLEG 9
L PG S+EG
Sbjct: 175 LLPGRSIEG 183




10|Sequence|46|55|SLEGPAQPQS

>sp|SECY_HALMA|PROTEIN translocase subunit SecY|Haloarcula marismortui (strain ATCC 43049

Query: 2 LEGPAQP 8
LEG AQP
Sbjct: 352 LEGTAQP 358


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 LEGPAQPQ 9
LEG AQP+
Sbjct: 968 LEGEAQPR 975




11|Sequence|51|60|AQPQSSPVQA

>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 QPQSSPVQ 9
+P+SSPV+
Sbjct: 480 KPESSPVE 487




12|Sequence|56|65|SPVQATFEVL

>sp|PYRI_METMJ|ASPARTATE carbamoyltransferase regulatory chain|Methanoculleus marisnigri

Query: 2 PVQATFEVL 10
PV +TFEVL
Sbjct: 125 PVASTFEVL 133


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 2 PVQATFEVL 10
PV+ TFE+L
Sbjct: 433 PVKITFEIL 441


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 2 PVQATFEVL 10
PV+ TFE+L
Sbjct: 433 PVRITFEIL 441


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 PVQATFEVL 10
PV+A FEV+
Sbjct: 122 PVKAIFEVI 130


>sp|GATE_PYRIL|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PVQATFEVL 10
P++ TFE+L
Sbjct: 433 PIRITFEIL 441


>sp|GATE_CALMQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Caldivirga maquilingensis (strain ATCC

Query: 2 PVQATFEVL 10
P++ TFE+L
Sbjct: 438 PIRITFELL 446


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 2 PVQATFEVL 10
PV+ TFE++
Sbjct: 433 PVKITFEIM 441


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 2 PVQATFEVL 10
P++ TFE+L
Sbjct: 433 PIKVTFELL 441


>sp|IF2P_HALWD|PROBABLE translation initiation factor IF-2|Haloquadratum walsbyi (strain

Query: 1 SPVQATFE 8
SP+Q T+E
Sbjct: 172 SPIQPTYE 179


>sp|PYRI_NATPD|ASPARTATE carbamoyltransferase regulatory chain|Natronomonas pharaonis

Query: 2 PVQATFEVL 10
PV + FEVL
Sbjct: 121 PVDSRFEVL 129




13|Sequence|61|70|TFEVLDFITH

>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EVLDFIT 9
EV+DFIT
Sbjct: 284 EVIDFIT 290


>sp|ARLY_METTP|ARGININOSUCCINATE lyase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 EVLDFIT 9
EVLDFI+
Sbjct: 14 EVLDFIS 20


>sp|RL22_METB6|LARGE ribosomal subunit protein uL22|Methanoregula boonei (strain DSM

Query: 1 TFEVLDFITH 10
+ E+ DFI H
Sbjct: 30 SIEIADFIRH 39


>sp|CETZ_THEKO|TUBULIN-LIKE protein CetZ|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FEVLDFIT 9
FE LD++T
Sbjct: 276 FEALDYLT 283


>sp|ARCC_THEAC|CARBAMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TFEVLDFIT 9
TFE L F+T
Sbjct: 32 TFESLRFVT 40


>sp|PFDA_IGNH4|PREFOLDIN subunit alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 TFEVLDFIT 9
+ EVLD++T
Sbjct: 65 SLEVLDYLT 73


>sp|PYRI_METMJ|ASPARTATE carbamoyltransferase regulatory chain|Methanoculleus marisnigri

Query: 1 TFEVLD 6
TFEVLD
Sbjct: 129 TFEVLD 134


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FEVLDFI 8
+EVLDF+
Sbjct: 412 YEVLDFL 418


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 4 VLDFITH 10
VL+FITH
Sbjct: 378 VLNFITH 384


>sp|HEM1_METMJ|GLUTAMYL-TRNA reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 TFEVLDFITH 10
T EV+D +TH
Sbjct: 370 TAEVIDDLTH 379


>sp|HEM1_METAC|GLUTAMYL-TRNA reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 EVLDFITH 10
EVLD +TH
Sbjct: 369 EVLDDLTH 376


>sp|SYH_METJA|HISTIDINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EVLDFITH 10
E+L+F+ H
Sbjct: 246 EILEFVIH 253


>sp|SYTC_SACS2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 FEVLDFITH 10
FE+L+ TH
Sbjct: 95 FEILNISTH 103


>sp|SYTC_SACI7|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 FEVLDFITH 10
FE+L+ TH
Sbjct: 95 FEILNISTH 103


>sp|SYTC_SACI6|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 2 FEVLDFITH 10
FE+L+ TH
Sbjct: 95 FEILNISTH 103


>sp|SYTC_SACI4|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 2 FEVLDFITH 10
FE+L+ TH
Sbjct: 95 FEILNISTH 103


>sp|SYTC_SACI3|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.27)

Query: 2 FEVLDFITH 10
FE+L+ TH
Sbjct: 95 FEILNISTH 103


>sp|SYTC_SACI2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 2 FEVLDFITH 10
FE+L+ TH
Sbjct: 95 FEILNISTH 103


>sp|SYTC_SACI1|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 FEVLDFITH 10
FE+L+ TH
Sbjct: 95 FEILNISTH 103




14|Sequence|66|75|DFITHLYAGA

>sp|COFF_METMP|COENZYME gamma-F420-2:alpha-L-glutamate ligase|Methanococcus maripaludis

Query: 1 DFITHLYAGA 10
+FIT+LY G
Sbjct: 203 NFITNLYVGG 212


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 2 FITHLYA 8
++THLYA
Sbjct: 133 YMTHLYA 139


>sp|SUCC_HALMA|SUCCINATE--COA ligase [ADP-forming] subunit beta|Haloarcula marismortui (strain

Query: 1 DFITHLYAG 9
DF+ LY G
Sbjct: 95 DFVNELYVG 103


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 4 THLYAGA 10
TH+Y GA
Sbjct: 302 THVYKGA 308


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 3 ITHLYAG 9
I H+YAG
Sbjct: 540 IRHIYAG 546


>sp|SUCC_HALLT|SUCCINATE--COA ligase [ADP-forming] subunit beta|Halorubrum lacusprofundi (strain

Query: 1 DFITHLYAG 9
DF+ LY G
Sbjct: 95 DFVDELYVG 103




15|Sequence|71|80|LYAGADVHRH

>sp|SYR_HALMA|ARGININE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 YAGADVHRH 10
YAG DV RH
Sbjct: 149 YAGYDVDRH 157


>sp|SYR_NATPD|ARGININE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 YAGADVHRH 10
YAG DV RH
Sbjct: 149 YAGYDVDRH 157


>sp|MRE11_METTH|DNA double-strand break repair protein|Methanothermobacter

Query: 2 YAGADVHR 9
YAG VHR
Sbjct: 362 YAGGHVHR 369


>sp|SYR_HALLT|ARGININE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 YAGADVHRH 10
YAG DV RH
Sbjct: 150 YAGYDVDRH 158


>sp|PYRC_METMA|DIHYDROOROTASE mazei (strain ATCC BAA-159

Query: 1 LYAGADVHRH 10
L AG DVH H
Sbjct: 53 LPAGIDVHVH 62


>sp|PYRC_METAC|DIHYDROOROTASE acetivorans (strain ATCC 35395

Query: 1 LYAGADVHRH 10
L AG DVH H
Sbjct: 53 LPAGIDVHVH 62


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 YAGADVHR 9
YAG VHR
Sbjct: 402 YAGTPVHR 409


>sp|PYRC_ARCFU|DIHYDROOROTASE fulgidus (strain ATCC 49558

Query: 1 LYAGADVHRH 10
L AG DVH H
Sbjct: 41 LPAGIDVHVH 50


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 2 YAGADVHRH 10
YAGADV+
Sbjct: 278 YAGADVYEK 286


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GADVHRH 10
GAD+H H
Sbjct: 274 GADLHYH 280


>sp|THIL_METHJ|THIAMINE-MONOPHOSPHATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LYAGADVHRH 10
+YAG D+ H
Sbjct: 106 VYAGGDLDAH 115


>sp|TRM56_IGNH4|TRNA (cytidine(56)-2'-O)-methyltransferase|Ignicoccus hospitalis (strain

Query: 1 LYAGADVHRH 10
LY GA+++R
Sbjct: 142 LYGGAELYRQ 151


>sp|COFH1_METMP|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanococcus maripaludis (strain DSM

Query: 2 YAGADVH 8
Y G DVH
Sbjct: 129 YGGIDVH 135


>sp|TRM56_METKA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanopyrus kandleri (strain

Query: 1 LYAGADVHRH 10
LY G ++HR
Sbjct: 149 LYEGKELHRE 158


>sp|ADH_SULSR|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus sp. (strain RC3)

Query: 4 GADVHRH 10
GAD+H H
Sbjct: 274 GADLHFH 280


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 3 AGADVHRH 10
AG D HRH
Sbjct: 336 AGMDRHRH 343




16|Sequence|76|85|DVHRHLDVRI

>sp|Y761_METJA|UNCHARACTERIZED metal-dependent hydrolase MJ0761|Methanocaldococcus jannaschii

Query: 1 DVHRHLDVR 9
D H HLDVR
Sbjct: 3 DAHTHLDVR 11


>sp|Y1412_META3|UPF0210 protein Maeo_1412|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 HRHLDVR 9
H HLD+R
Sbjct: 16 HEHLDIR 22


>sp|IDH_ARCFU|ISOCITRATE dehydrogenase [NADP]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DVHRHL 6
D+HRH+
Sbjct: 386 DIHRHM 391


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 2 VHRHLDVRI 10
+HR L +RI
Sbjct: 372 LHRRLSIRI 380


>sp|SYY_NATPD|TYROSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DVHRHLD 7
D+H HLD
Sbjct: 72 DLHAHLD 78


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 1 DVHRHLDV 8
D++RH D+
Sbjct: 399 DIYRHTDL 406


>sp|Y1758_ARCFU|UNCHARACTERIZED protein AF_1758|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DVHRHLDVRI 10
D RHLDV I
Sbjct: 145 DKGRHLDVTI 154


>sp|SYDND_HALSA|ASPARTATE--TRNA(ASP/ASN) ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 HRHLDVR 9
RHLDVR
Sbjct: 122 ERHLDVR 128


>sp|SYY_HALMA|TYROSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DVHRHLD 7
D+H HLD
Sbjct: 71 DLHAHLD 77


>sp|RRP4_PYRAE|EXOSOME complex component Rrp4|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VHRHLDV 8
+HRH+D+
Sbjct: 96 LHRHVDL 102


>sp|MFNA_METTH|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothermobacter

Query: 1 DVHRHLD 7
D+H H+D
Sbjct: 165 DIHLHID 171




17|Sequence|81|90|LDVRILLTNI

>sp|Y2678_METMA|UNCHARACTERIZED serpin-like protein MM_2675|Methanosarcina mazei (strain ATCC

Query: 2 DVRILLTN 9
D RI++TN
Sbjct: 204 DTRIIITN 211


>sp|Y2613_METAC|UNCHARACTERIZED serpin-like protein MA_2613/MA_2612|Methanosarcina acetivorans

Query: 2 DVRILLTN 9
D R++LTN
Sbjct: 193 DTRLILTN 200


>sp|HIS4_ARCFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Archaeoglobus fulgidus (strain

Query: 1 LDVRILLTNI 10
LDV L TNI
Sbjct: 157 LDVSFLYTNI 166




18|Sequence|86|95|LLTNIRTKST

>sp|UPP_PYRAE|URACIL phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC

Query: 1 LLTNIRTKST 10
LLT +R K+T
Sbjct: 14 LLTKLRDKNT 23




19|Sequence|91|100|RTKSTFLPPL

>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 1 RTKSTFLP 8
RT+S+F+P
Sbjct: 600 RTESSFVP 607


>sp|RS13_METTH|SMALL ribosomal subunit protein uS13|Methanothermobacter

Query: 1 RTKSTF 6
RTKSTF
Sbjct: 131 RTKSTF 136


>sp|RS13_METST|SMALL ribosomal subunit protein uS13|Methanosphaera stadtmanae (strain

Query: 1 RTKSTF 6
RTKSTF
Sbjct: 132 RTKSTF 137


>sp|RS13_METS3|SMALL ribosomal subunit protein uS13|Methanobrevibacter smithii (strain

Query: 1 RTKSTF 6
RTKSTF
Sbjct: 131 RTKSTF 136


>sp|RS13_METJA|SMALL ribosomal subunit protein uS13|Methanocaldococcus jannaschii

Query: 1 RTKSTF 6
RTKSTF
Sbjct: 132 RTKSTF 137


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 RTKSTFLPPL 10
RT+ LPPL
Sbjct: 70 RTEEKSLPPL 79




20|Sequence|96|105|FLPPLPTSVQ

>sp|BACS3_HALMA|SENSORY rhodopsin III|Haloarcula marismortui (strain ATCC 43049

Query: 1 FLPPLPTSV 9
+LPP+ TSV
Sbjct: 38 YLPPIHTSV 46


>sp|EF1A_PYRIL|ELONGATION factor 1-alpha|Pyrobaculum islandicum (strain DSM 4184

Query: 2 LPPLPTSVQ 10
LPP PT++Q
Sbjct: 6 LPPKPTALQ 14


>sp|KUP_METHJ|PROBABLE potassium transport system protein|Methanospirillum hungatei JF-1

Query: 1 FLPPLPTSV 9
FLPP P ++
Sbjct: 43 FLPPTPENI 51


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 1 FLPPLPTSV 9
+LPPLP +V
Sbjct: 674 YLPPLPYNV 682


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 LPPLPTSVQ 10
LPPLP + +
Sbjct: 76 LPPLPNAAK 84


>sp|EF1A_PYRAR|ELONGATION factor 1-alpha|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LPPLPTSVQ 10
LPP PT++Q
Sbjct: 6 LPPKPTALQ 14


>sp|EF1A_PYRAE|ELONGATION factor 1-alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LPPLPTSVQ 10
LPP PT++Q
Sbjct: 6 LPPKPTALQ 14


>sp|EF1A_PYRCJ|ELONGATION factor 1-alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LPPLPTSVQ 10
LPP PT++Q
Sbjct: 6 LPPKPTALQ 14


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LPPLPTS 8
LPPLP +
Sbjct: 87 LPPLPNA 93




21|Sequence|101|110|PTSVQNLAHP

>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 PTSVQN 6
PTS+QN
Sbjct: 700 PTSIQN 705




22|Sequence|106|115|NLAHPPEVVL

>sp|DPM1_PYRFU|DOLICHOL-PHOSPHATE mannosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NLAHPPEVV 9
+L HPPEV+
Sbjct: 91 DLQHPPEVI 99


>sp|SRP54_PYRFU|SIGNAL recognition particle 54 kDa|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NLAHPPEVVL 10
N+ HP EV+L
Sbjct: 209 NVIHPHEVIL 218


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 1 NLAHPP 6
NLAHPP
Sbjct: 5 NLAHPP 10


>sp|RL4_METMJ|LARGE ribosomal subunit protein uL4|Methanoculleus marisnigri (strain

Query: 3 AHPPEV 8
AHPP+V
Sbjct: 91 AHPPKV 96


>sp|RL4_METM7|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain

Query: 3 AHPPEV 8
AHPP+V
Sbjct: 90 AHPPKV 95


>sp|RL4_METM6|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain

Query: 3 AHPPEV 8
AHPP+V
Sbjct: 90 AHPPKV 95


>sp|RL4_METMP|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain

Query: 3 AHPPEV 8
AHPP+V
Sbjct: 90 AHPPKV 95


>sp|RL4_METM5|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain

Query: 3 AHPPEV 8
AHPP+V
Sbjct: 90 AHPPKV 95


>sp|RL4_METHJ|LARGE ribosomal subunit protein uL4|Methanospirillum hungatei JF-1

Query: 3 AHPPEV 8
AHPP+V
Sbjct: 91 AHPPKV 96


>sp|RL4_METVS|LARGE ribosomal subunit protein uL4|Methanococcus vannielii (strain

Query: 3 AHPPEV 8
AHPP+V
Sbjct: 90 AHPPKV 95


>sp|RL4_METST|LARGE ribosomal subunit protein uL4|Methanosphaera stadtmanae (strain

Query: 3 AHPPEV 8
AHPP V
Sbjct: 92 AHPPRV 97


>sp|Y412_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 LAHPPEVVL 10
LA+ PE+VL
Sbjct: 162 LANDPEIVL 170


>sp|RL4_METJA|LARGE ribosomal subunit protein uL4|Methanocaldococcus jannaschii

Query: 3 AHPPEV 8
AHPP+V
Sbjct: 90 AHPPKV 95


>sp|Y582_METMA|UNCHARACTERIZED glycosyltransferase MM_0582|Methanosarcina mazei (strain ATCC

Query: 5 PPEVVL 10
PPEV+L
Sbjct: 329 PPEVIL 334


>sp|RIFK_IGNH4|RIBOFLAVIN kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 HPPEVV 9
HPPE++
Sbjct: 149 HPPEII 154


>sp|NOP10_THESM|RIBOSOME biogenesis protein Nop10|Thermococcus sibiricus (strain DSM 12597

Query: 2 LAHPPE 7
LAHPP+
Sbjct: 29 LAHPPK 34


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 NLAHPPEV 8
NL HP E+
Sbjct: 517 NLGHPEEI 524


>sp|RL4_THESM|LARGE ribosomal subunit protein uL4|Thermococcus sibiricus (strain DSM

Query: 3 AHPPEV 8
AHPP+V
Sbjct: 92 AHPPKV 97


>sp|SRP54_SULAC|SIGNAL recognition particle 54 kDa|Sulfolobus acidocaldarius (strain ATCC

Query: 4 HPPEVVL 10
HP EV+L
Sbjct: 209 HPDEVIL 215


>sp|RL4_PYRHO|LARGE ribosomal subunit protein uL4|Pyrococcus horikoshii (strain ATCC

Query: 3 AHPPEV 8
AHPP+V
Sbjct: 92 AHPPKV 97


>sp|Y1636_METMA|UNCHARACTERIZED glycosyltransferase MM_1636|Methanosarcina mazei (strain ATCC

Query: 5 PPEVVL 10
PPEV+L
Sbjct: 329 PPEVIL 334


>sp|Y452_METAC|UNCHARACTERIZED glycosyltransferase MA_0452|Methanosarcina acetivorans (strain ATCC

Query: 5 PPEVVL 10
PPEV+L
Sbjct: 329 PPEVIL 334


>sp|RL4_AERPE|LARGE ribosomal subunit protein uL4|Aeropyrum pernix (strain ATCC 700893

Query: 3 AHPPEV 8
AHPP V
Sbjct: 104 AHPPRV 109


>sp|GCH1L_METTH|GTP cyclohydrolase 1 type 2|Methanothermobacter thermautotrophicus

Query: 2 LAHPPEV 8
L HPPEV
Sbjct: 60 LHHPPEV 66


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 NLAHPPEVV 9
NLA PP+ +
Sbjct: 86 NLAPPPKAI 94


>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 1 NLAHPPEV 8
++AHPP +
Sbjct: 259 HIAHPPSM 266




23|Sequence|111|120|PEVVLTDFQT

>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 1 PEVVLTDFQT 10
PE V TDF T
Sbjct: 579 PETVSTDFDT 588


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 1 PEVVLTDFQT 10
PE V TDF T
Sbjct: 579 PETVSTDFDT 588


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 1 PEVVLTDFQT 10
PE V TDF T
Sbjct: 581 PETVSTDFDT 590


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 PEVVLTDFQT 10
PE V TDF T
Sbjct: 590 PETVSTDFDT 599


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 1 PEVVLTDFQT 10
PE V TDF T
Sbjct: 589 PETVSTDFDT 598


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 1 PEVVLTDFQT 10
PE V TDF T
Sbjct: 579 PETVSTDFDT 588


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 PEVVLTDFQT 10
PE V TDF T
Sbjct: 589 PETVSTDFDT 598


>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 PEVVLTDFQT 10
PE V TD+ T
Sbjct: 128 PETVSTDYDT 137


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 1 PEVVLTDFQT 10
PE V TD+ T
Sbjct: 604 PETVSTDYDT 613


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 PEVVLTDF 8
PE V TDF
Sbjct: 587 PETVSTDF 594


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 1 PEVVLTDFQT 10
PE V TD+ T
Sbjct: 592 PETVSTDYDT 601


>sp|TRIN_SULTO|PUTATIVE Tricorn-like protease N-terminal subunit|Sulfurisphaera tokodaii

Query: 3 VVLTDFQT 10
+VLTDF T
Sbjct: 120 LVLTDFHT 127


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VVLTDFQT 10
+V+TDF T
Sbjct: 162 IVITDFHT 169


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 1 PEVVLTDFQT 10
PE V TD+ T
Sbjct: 607 PETVSTDYDT 616


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 1 PEVVLTDF 8
PE V TDF
Sbjct: 587 PETVSTDF 594


>sp|ASSY_ARCFU|ARGININOSUCCINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PEVVLTDFQ 9
PE+V DF+
Sbjct: 209 PEIVKIDFE 217


>sp|TRUD_METVS|PROBABLE tRNA pseudouridine synthase D|Methanococcus vannielii (strain ATCC

Query: 1 PEVVLTDFQ 9
PE+++ D Q
Sbjct: 118 PEIIIKDIQ 126


>sp|CARB2_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain

Query: 1 PEVVLTDFQT 10
PE V TD+ T
Sbjct: 46 PETVSTDYDT 55


>sp|TAL_PICTO|PROBABLE transaldolase|Picrophilus torridus (strain ATCC 700027

Query: 2 EVVLTDFQ 9
EVV TD+Q
Sbjct: 60 EVVATDYQ 67




24|Sequence|116|125|TDFQTLDGSQ

>sp|HJC_THEKO|CROSSOVER junction endodeoxyribonuclease Hjc|Thermococcus kodakarensis

Query: 1 TDFQTLDG 8
T F TLDG
Sbjct: 109 TPFMTLDG 116


>sp|COBQ_METMA|PROBABLE cobyric acid synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TDFQTLDG 8
TDF+ L+G
Sbjct: 265 TDFEPLEG 272


>sp|COBQ_METAC|PROBABLE cobyric acid synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TDFQTLDG 8
TDF+ L+G
Sbjct: 265 TDFEPLEG 272




25|Sequence|121|130|LDGSQYNPVK

>sp|TBPF_HALSA|TATA-BOX-BINDING protein F|Halobacterium salinarum (strain ATCC 700922

Query: 1 LDGSQYNP 8
LDG++YNP
Sbjct: 32 LDGAEYNP 39


>sp|TBP_THEAC|TATA-BOX-BINDING protein|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LDGSQYNP 8
LDGS+Y P
Sbjct: 31 LDGSEYEP 38


>sp|TBP_THEVO|TATA-BOX-BINDING protein|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LDGSQYNP 8
LDGS+Y P
Sbjct: 31 LDGSEYEP 38


>sp|TBP3_METMA|TATA-BOX-BINDING protein 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LDGSQYNPVK 10
L+G++YN VK
Sbjct: 30 LEGAEYNKVK 39


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 DGSQYNPVK 10
DG++Y+P K
Sbjct: 159 DGAEYDPAK 167


>sp|RPO7_METJA|DNA-DIRECTED RNA polymerase subunit Rpo7|Methanocaldococcus jannaschii (strain

Query: 2 DGSQYNPV 9
DGS Y+PV
Sbjct: 63 DGSAYHPV 70


>sp|TRPB_HALVD|TRYPTOPHAN synthase beta chain|Haloferax volcanii (strain ATCC 29605

Query: 1 LDGSQYNPV 9
L+GS+ NPV
Sbjct: 151 LNGSEVNPV 159


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus (strain

Query: 1 LDGSQYNP 8
LDG +Y P
Sbjct: 299 LDGEEYEP 306


>sp|TRUA_METLZ|TRNA pseudouridine synthase A|Methanocorpusculum labreanum (strain

Query: 3 GSQYNPVK 10
GSQY P K
Sbjct: 16 GSQYQPHK 23


>sp|TBP3_METAC|TATA-BOX-BINDING protein 3|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LDGSQYNPVK 10
L+G++YN K
Sbjct: 30 LEGAEYNKTK 39


>sp|NADK_HALSA|NAD kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LDGSQYNPVK 10
+DGSQY +
Sbjct: 161 VDGSQYEATR 170


>sp|NADK_HALS3|NAD kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LDGSQYNPVK 10
+DGSQY +
Sbjct: 161 VDGSQYEATR 170


>sp|TBP_PICTO|TATA-BOX-BINDING protein|Picrophilus torridus (strain ATCC 700027

Query: 1 LDGSQYNP 8
L+GS+Y P
Sbjct: 31 LEGSEYEP 38


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LDGSQY 6
LDGSQY
Sbjct: 563 LDGSQY 568


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 1 LDGSQYNP 8
LDG +Y P
Sbjct: 83 LDGEEYTP 90


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 LDGSQYNPVK 10
L+G +Y P+K
Sbjct: 227 LNGEKYYPMK 236


>sp|PUR1_METJA|AMIDOPHOSPHORIBOSYLTRANSFERASE jannaschii (strain ATCC 43067

Query: 4 SQYNPV 9
S+YNPV
Sbjct: 236 SEYNPV 241


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 5 QYNPVK 10
+YNP+K
Sbjct: 2 EYNPIK 7


>sp|AROC_METKA|CHORISMATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 LDGSQYNPVK 10
+D S+Y P++
Sbjct: 88 VDSSKYEPIR 97


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 1 LDGSQYN 7
LDG+ YN
Sbjct: 30 LDGTSYN 36


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 LDGSQYNPV 9
+DGS+ PV
Sbjct: 281 IDGSELEPV 289


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 1 LDGSQYNP 8
L G+QY P
Sbjct: 82 LQGTQYKP 89


>sp|LEUC_NATPD|3-ISOPROPYLMALATE dehydratase large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LDGSQYNPV 9
+DGS+ PV
Sbjct: 281 IDGSEIEPV 289


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DGSQYNPV 9
DG++Y+P+
Sbjct: 241 DGNRYSPM 248


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DGSQYNPV 9
DG++Y+P+
Sbjct: 240 DGNRYSPM 247




26|Sequence|126|135|YNPVKQQLVR

>sp|AROE_ARCFU|SHIKIMATE dehydrogenase (NADP(+))|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YNPVKQQLVR 10
YNP++ L+R
Sbjct: 213 YNPMETPLIR 222


>sp|EF1A_METMJ|ELONGATION factor 1-alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 YNPVKQQL 8
YN VK+QL
Sbjct: 158 YNEVKEQL 165




27|Sequence|131|140|QQLVRYATSC

>sp|Y045_METTH|MEMO1 family protein MTH_45|Methanothermobacter thermautotrophicus

Query: 3 LVRYATS 9
L+RYATS
Sbjct: 254 LLRYATS 260


>sp|RPO1C_METAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina acetivorans (strain

Query: 6 YATSC 10
YATSC
Sbjct: 48 YATSC 52




28|Sequence|136|145|YATSCYSCCP

>sp|HDRC2_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 YATSCYSC---CP 10
Y T+CY+C CP
Sbjct: 78 YCTTCYTCYERCP 90


>sp|RPO1C_METAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina acetivorans (strain

Query: 1 YATSCYSCC 9
YATSC C
Sbjct: 48 YATSCIEPC 56


>sp|DSRB_ARCFU|SULFITE reductase, dissimilatory-type subunit beta|Archaeoglobus fulgidus

Query: 1 YATSCYSCCP 10
Y +CY+ CP
Sbjct: 243 YCGNCYTMCP 252


>sp|HDRC_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 3 TSCYSC---CP 10
T+CYSC CP
Sbjct: 80 TTCYSCQERCP 90


>sp|HDRC_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 3 TSCYSC---CP 10
T+CYSC CP
Sbjct: 80 TTCYSCQERCP 90


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 4 SCYSCCP 10
SCY CP
Sbjct: 422 SCYLVCP 428


>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 CYSCCP 10
CY+ CP
Sbjct: 303 CYAQCP 308


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 5 CYSCCP 10
CY+ CP
Sbjct: 302 CYAQCP 307


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 CYSCCP 10
CY+ CP
Sbjct: 302 CYAQCP 307


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 5 CYSCCP 10
CY CP
Sbjct: 741 CYRICP 746


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 2 ATSCYSCC 9
AT+C CC
Sbjct: 5 ATTCRGCC 12


>sp|HDRC_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus

Query: 3 TSCYSC---CP 10
T+CY+C CP
Sbjct: 86 TTCYTCYERCP 96


>sp|BPS2_ACIAM|PROTEIN bps2|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 YATSCYSC 8
+ T+CY C
Sbjct: 288 HLTTCYVC 295


>sp|Y1349_METJA|UNCHARACTERIZED protein MJ1349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SCYSCCP 10
+CY CP
Sbjct: 80 ACYDACP 86


>sp|HDRC2_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C2|Methanococcus

Query: 3 TSCYSC---CP 10
T+CY+C CP
Sbjct: 78 TTCYTCYERCP 88


>sp|HYD1D_PYRFU|SULFHYDROGENASE 1 subunit delta|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TSCYSC 8
TSCY C
Sbjct: 12 TSCYGC 17


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 4 SCYSCCP 10
+CY CP
Sbjct: 422 ACYLACP 428


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 4 SCYSCCP 10
SC S CP
Sbjct: 141 SCISSCP 147


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 4 SCYSCCP 10
SC S CP
Sbjct: 139 SCLSVCP 145




29|Sequence|141|150|YSCCPRLASV

>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 1 YSCCP 5
Y CCP
Sbjct: 268 YPCCP 272


>sp|NADA_METMA|QUINOLINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YSCCPRLASV 10
++CCP + V
Sbjct: 256 FACCPSMKMV 265


>sp|NADA1_METAC|QUINOLINATE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YSCCPRLASV 10
++CCP + V
Sbjct: 256 FACCPSMKMV 265


>sp|NADA_METBF|QUINOLINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YSCCPRLASV 10
++CCP + V
Sbjct: 256 FACCPSMKMV 265




30|Sequence|146|155|RLASVLLYSD

>sp|COFC_HALMA|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LASVLLYSD 10
LA VLL+SD
Sbjct: 173 LAEVLLHSD 181




31|Sequence|151|160|LLYSDYGIGE

>sp|MPTA_METVS|GTP cyclohydrolase MptA|Methanococcus vannielii (strain ATCC 35089

Query: 1 LLYSDYGIGE 10
+LYSDY + E
Sbjct: 107 MLYSDYMMEE 116


>sp|MPTA_METMP|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain DSM 14266

Query: 1 LLYSDYGIGE 10
+LYSDY + E
Sbjct: 107 MLYSDYMMEE 116


>sp|MPTA_METM7|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C7 /

Query: 1 LLYSDYGIGE 10
+LYSDY + E
Sbjct: 107 MLYSDYMMEE 116


>sp|MPTA_METM6|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C6 /

Query: 1 LLYSDYGIGE 10
+LYSDY + E
Sbjct: 107 MLYSDYMMEE 116


>sp|MPTA_METM5|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C5 /

Query: 1 LLYSDYGIGE 10
+LYSDY + E
Sbjct: 107 MLYSDYMMEE 116


>sp|RS24_IGNH4|SMALL ribosomal subunit protein eS24|Ignicoccus hospitalis (strain

Query: 2 LYSDYGIG 9
L S+YGIG
Sbjct: 59 LLSEYGIG 66


>sp|SYH_METKA|HISTIDINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 LYSDYGIGE 10
L +YGIGE
Sbjct: 174 LLEEYGIGE 182


>sp|Y874_METJA|UNCHARACTERIZED protein MJ0874|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLYSDYGIGE 10
++Y+D+ IGE
Sbjct: 52 VVYTDFPIGE 61


>sp|GATE_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 2 LYSDYGIGE 10
L +YG+GE
Sbjct: 471 LAEEYGLGE 479




32|Sequence|156|165|YGIGEVPVEP

>sp|MTRD_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanothermobacter

Query: 1 YGIGEVPVEP 10
YG+G VPV
Sbjct: 94 YGVGTVPVSA 103


>sp|RNZ_NANEQ|RIBONUCLEASE Z|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 YGIGEVPV 8
YGI +VPV
Sbjct: 132 YGIHQVPV 139


>sp|MDH_PYRAE|MALATE dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YGIGEVPVE 9
YG+ +VPVE
Sbjct: 255 YGVRDVPVE 263


>sp|TRUA_METTP|TRNA pseudouridine synthase A|Methanothrix thermoacetophila (strain DSM

Query: 2 GIGEVPVE 9
GIGE PV+
Sbjct: 187 GIGEKPVD 194


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 1 YGIGEVPVE 9
YGIG+V +E
Sbjct: 595 YGIGKVEIE 603


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 1 YGIGEVPVE 9
YGIG+V +E
Sbjct: 601 YGIGKVRIE 609


>sp|ARGC_METKA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanopyrus kandleri (strain AV19 /

Query: 1 YGIGEVPVEP 10
+G+G+V +EP
Sbjct: 245 HGLGDVEIEP 254


>sp|PHEA_METJA|PREPHENATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GIGEVPVE 9
G+G VP+E
Sbjct: 49 GLGVVPIE 56


>sp|AGLK_METVO|UDP-N-ACETYLGLUCOSAMINE--DOLICHYL-PHOSPHATE N-acetylglucosaminyltransferase|Methanococcus voltae

Query: 3 IGEVPVE 9
IGEVP++
Sbjct: 211 IGEVPIK 217


>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 3 IGEVPVEP 10
+GE P+EP
Sbjct: 435 LGEKPLEP 442


>sp|MTRD_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanothermobacter marburgensis

Query: 1 YGIGEVPVEP 10
+G+G VPV
Sbjct: 94 FGVGTVPVSA 103


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GIGEVPVE 9
G+GEVP+
Sbjct: 62 GVGEVPIS 69


>sp|TTUA_PYRHO|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YGIGEVPVE 9
YGIGEV
Sbjct: 116 YGIGEVKTR 124


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GIGEVP 7
GIGEVP
Sbjct: 23 GIGEVP 28


>sp|ADEC_META3|ADENINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 YGIGEVPVEP 10
YG+ +V ++P
Sbjct: 107 YGVSKVIIDP 116


>sp|Y1572_METJA|PUTATIVE ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 YGIGEVPV 8
Y I E+PV
Sbjct: 255 YNINEIPV 262


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 GEVPVEP 10
G VPVEP
Sbjct: 72 GHVPVEP 78


>sp|PTH_SULTO|PEPTIDYL-TRNA hydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GIGEVPVE 9
GIG PVE
Sbjct: 102 GIGPAPVE 109


>sp|GCH3_PYRNV|GTP cyclohydrolase III|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GIGEVPVE 9
G+GE P E
Sbjct: 89 GVGETPYE 96


>sp|Y1859_ARCFU|UNCHARACTERIZED protein AF_1859|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YGIGEVP 7
YG GEVP
Sbjct: 208 YGSGEVP 214


>sp|GPN_PYRAB|GPN-LOOP GTPase PAB0955|Pyrococcus abyssi (strain GE5 /

Query: 2 GIGEVPVEP 10
G+ E+P EP
Sbjct: 38 GVKELPYEP 46


>sp|SPSS1_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 YGIGEVPVE 9
YGIG+V E
Sbjct: 241 YGIGKVAQE 249


>sp|TRPD_SACS2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 YGIGEVPVE 9
+GI +P+E
Sbjct: 251 FGISPIPIE 259


>sp|COFH1_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina barkeri (strain Fusaro

Query: 1 YGIGEVPVE 9
YG G VP E
Sbjct: 342 YGAGRVPKE 350


>sp|Y3206_SACS2|RUTC family protein SSO3206|Saccharolobus solfataricus (strain ATCC

Query: 1 YGIGEVPVEP 10
Y G++PV+P
Sbjct: 28 YVSGQIPVDP 37




33|Sequence|161|170|VPVEPLDVPL

>sp|SRP54_METST|SIGNAL recognition particle 54 kDa|Methanosphaera stadtmanae (strain ATCC

Query: 4 EPLDVPL 10
EPLDVP+
Sbjct: 151 EPLDVPV 157


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 VEPLDVP 9
V+PLDVP
Sbjct: 776 VDPLDVP 782


>sp|HMEC_ARCFU|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus fulgidus

Query: 2 PVEPLDVPL 10
P +P DVPL
Sbjct: 279 PWDPADVPL 287


>sp|EF2_METRM|ELONGATION factor 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 VPVEPLDVPL 10
+ V+PLD PL
Sbjct: 491 IDVQPLDKPL 500


>sp|SYP_METMA|PROLINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 EPLDVPL 10
+PLD+PL
Sbjct: 103 DPLDIPL 109


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 PVEPLDV 8
PV P+DV
Sbjct: 1076 PVRPIDV 1082


>sp|EF1A_PICTO|ELONGATION factor 1-alpha|Picrophilus torridus (strain ATCC 700027

Query: 1 VPVEPLDVPL 10
VP +P+D PL
Sbjct: 218 VPAKPVDKPL 227


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 VPVEPLDVPL 10
VPV+ +D P+
Sbjct: 386 VPVDSIDPPI 395


>sp|AROA_AERPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PVEPLDVPL 10
P+EP+DV L
Sbjct: 292 PLEPVDVDL 300


>sp|PDXT_METPE|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosphaerula palustris

Query: 1 VPVEPLDVPL 10
+PV+ LD P
Sbjct: 125 IPVQGLDAPF 134


>sp|SYE_HALWD|GLUTAMATE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VPVEPLDVP 9
+ +EP DVP
Sbjct: 470 ITIEPADVP 478


>sp|PUR7_METMJ|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 EPLDVPL 10
EPLD PL
Sbjct: 111 EPLDPPL 117


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 3 VEPLDVPL 10
+EP+D+P+
Sbjct: 83 IEPVDLPV 90


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus

Query: 4 EPLDVP 9
EPLD+P
Sbjct: 35 EPLDLP 40


>sp|COFC_METVS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VPVEPLDVPL 10
V + P DVPL
Sbjct: 95 VLITPADVPL 104


>sp|PORA_METTH|PYRUVATE synthase subunit PorA|Methanothermobacter thermautotrophicus

Query: 3 VEPLDVP 9
VEP+D+P
Sbjct: 175 VEPVDIP 181




34|Sequence|166|175|LDVPLPSTIR

>sp|HIS8_SACS2|HISTIDINOL-PHOSPHATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LDVPLPSTI 9
D+PLPS I
Sbjct: 269 FDIPLPSLI 277


>sp|AGOG_AERPE|N-GLYCOSYLASE/DNA lyase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LDVPLPSTIR 10
LDVP+P +R
Sbjct: 184 LDVPIPVDVR 193


>sp|RS17_METMJ|SMALL ribosomal subunit protein uS17|Methanoculleus marisnigri (strain

Query: 1 LDVPLPST 8
LDVP+P T
Sbjct: 7 LDVPIPET 14


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 2 DVPLPSTI 9
D+PLPS I
Sbjct: 15 DLPLPSNI 22


>sp|AROK_THEAC|SHIKIMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LDVPLPSTIR 10
+DVP+ T+R
Sbjct: 28 IDVPMTVTVR 37


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDVPLPSTI 9
LD+P+P +
Sbjct: 29 LDIPIPQKL 37


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LDVPLPS 7
L++PLPS
Sbjct: 541 LEIPLPS 547


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LDVPLPSTI 9
+D+PL STI
Sbjct: 373 VDLPLESTI 381


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LDVPLPSTI 9
+D+PL STI
Sbjct: 373 VDLPLESTI 381


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 1 LDVPLPSTI 9
+D+PL STI
Sbjct: 373 VDLPLESTI 381


>sp|COBQ_METMJ|PROBABLE cobyric acid synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DVPLPS 7
D+PLPS
Sbjct: 226 DIPLPS 231


>sp|CAS5_ARCFU|CRISPR-ASSOCIATED protein Cas5|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LDVPLPS 7
L VPLPS
Sbjct: 27 LSVPLPS 33


>sp|SPT5_THEKO|TRANSCRIPTION elongation factor Spt5|Thermococcus kodakarensis (strain ATCC

Query: 3 VPLPSTIR 10
VP+P T+R
Sbjct: 132 VPIPVTVR 139


>sp|IF5A_METS3|TRANSLATION initiation factor 5A|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LDVPLPSTIR 10
LD+P+P ++
Sbjct: 96 LDLPMPEELK 105




35|Sequence|171|180|PSTIRPASPV

>sp|MPGS_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PSTIRPA 7
PST RPA
Sbjct: 359 PSTYRPA 365




36|Sequence|176|185|PASPVAGSPK

>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 1 PASPVAGSPK 10
PA V+G+PK
Sbjct: 361 PAGTVSGAPK 370


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus (strain

Query: 1 PASPVAGSPK 10
PA V+G+PK
Sbjct: 359 PAGTVSGAPK 368


>sp|TRPE_ARCFU|ANTHRANILATE synthase component 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PASPVAGSPK 10
PA V G+PK
Sbjct: 323 PAGTVTGAPK 332


>sp|GLMU_METVS|BIFUNCTIONAL protein GlmU|Methanococcus vannielii (strain ATCC 35089

Query: 1 PASPVAGSP 9
P P+AG P
Sbjct: 24 PMIPIAGKP 32


>sp|GLMU_METJA|BIFUNCTIONAL protein GlmU|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PASPVAGSP 9
P P+AG P
Sbjct: 24 PMIPIAGKP 32


>sp|TRPE_SACS2|ANTHRANILATE synthase component 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PASPVAGSPK 10
PA V+G+PK
Sbjct: 330 PAGTVSGAPK 339


>sp|TRPE_METJA|ANTHRANILATE synthase component 1|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PASPVAGSPK 10
PA ++G+PK
Sbjct: 381 PAGTLSGAPK 390


>sp|GLMU_METM5|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C5 /

Query: 1 PASPVAGSP 9
P P+AG P
Sbjct: 24 PMIPIAGKP 32


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 PASPVAGSP 9
P PVAG P
Sbjct: 162 PIHPVAGLP 170


>sp|GLMU_METM7|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C7 /

Query: 1 PASPVAGSP 9
P P+AG P
Sbjct: 24 PMIPIAGKP 32


>sp|GLMU_METMP|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain DSM 14266

Query: 1 PASPVAGSP 9
P P+AG P
Sbjct: 24 PMIPIAGKP 32


>sp|TRPE_AERPE|ANTHRANILATE synthase component 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PASPVAGSPK 10
PA V+G+PK
Sbjct: 343 PAGTVSGAPK 352




37|Sequence|181|190|AGSPKQPVRG

>sp|PUR2_METJA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GSPKQPVRG 10
G P PVRG
Sbjct: 348 GYPDNPVRG 356


>sp|EF1B_CALMQ|ELONGATION factor 1-beta|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 PKQPVRG 10
PK PV+G
Sbjct: 32 PKYPVKG 38


>sp|Y889_METJA|UNCHARACTERIZED protein MJ0889|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GSPKQPVRG 10
G PK VRG
Sbjct: 247 GKPKLKVRG 255


>sp|PUR2_THEKO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GSPKQPVRG 10
G P PVRG
Sbjct: 337 GYPTNPVRG 345


>sp|PUR2_PYRAB|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 GSPKQPVRG 10
G P+ P+RG
Sbjct: 338 GYPENPIRG 346


>sp|RADA_HALVD|DNA repair and recombination protein|Haloferax volcanii (strain ATCC

Query: 2 GSPKQPVRG 10
G P QP+ G
Sbjct: 287 GDPTQPIGG 295


>sp|IF2P_METLZ|PROBABLE translation initiation factor IF-2|Methanocorpusculum labreanum

Query: 1 AGSPKQPVRG 10
AGSP + +RG
Sbjct: 318 AGSPIRVIRG 327


>sp|NCPP_PYRAR|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum arsenaticum (strain

Query: 1 AGSPKQPV 8
AG+P QPV
Sbjct: 36 AGTPPQPV 43


>sp|PUR2_THEGJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 GSPKQPVRG 10
G P PVRG
Sbjct: 338 GYPTNPVRG 346


>sp|RADA_HALWD|DNA repair and recombination protein|Haloquadratum walsbyi (strain DSM

Query: 2 GSPKQPVRG 10
G P QP+ G
Sbjct: 287 GDPTQPIGG 295




38|Sequence|186|195|QPVRGYYRGA

>sp|PMDHL_THEKO|PHOSPHOMEVALONATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 PVRGYYRG 9
P++G+YRG
Sbjct: 347 PIKGWYRG 354


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PVRGYYR 8
PVRGY R
Sbjct: 304 PVRGYSR 310


>sp|GPMA_METHJ|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 QPVRGYYRG 9
+PVR YY G
Sbjct: 221 KPVRSYYLG 229


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 PVRGYYRG 9
P+RGY+ G
Sbjct: 774 PIRGYHAG 781


>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QPVRGYYR 8
+P+ GYYR
Sbjct: 324 KPIIGYYR 331


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 2 PVRGYYRG 9
PVR ++RG
Sbjct: 21 PVREWFRG 28


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 QPVRGYYR 8
+PV+G++R
Sbjct: 192 EPVKGFFR 199


>sp|SYH_SULTO|HISTIDINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QPVRGYYRG 9
+P+R YY G
Sbjct: 97 KPIRLYYLG 105


>sp|GUAAB_THEVO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma volcanium

Query: 1 QPVRGYYR 8
+P+R YY+
Sbjct: 161 EPLRDYYK 168


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 3 VRGYYR 8
V+GYYR
Sbjct: 26 VKGYYR 31


>sp|DCD_THESM|DCTP deaminase|Thermococcus sibiricus (strain DSM 12597

Query: 2 PVRGYYRGA 10
P RG Y+G+
Sbjct: 137 PYRGIYQGS 145


>sp|GPMA_METPE|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 1 QPVRGYYRG 9
P+R YY G
Sbjct: 221 HPIRHYYLG 229


>sp|DCD_THEGJ|DCTP deaminase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 QPVRGYYRGA 10
+P RG Y+G+
Sbjct: 136 RPYRGNYQGS 145


>sp|GPMA_METB6|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanoregula boonei (strain DSM 21154

Query: 1 QPVRGYYRG 9
P+R YY G
Sbjct: 221 HPIRHYYLG 229


>sp|RL30_METVS|LARGE ribosomal subunit protein uL30|Methanococcus vannielii (strain ATCC

Query: 2 PVRGYYRGA 10
P RGY RG
Sbjct: 120 PRRGYDRGG 128


>sp|RL30_METVA|LARGE ribosomal subunit protein uL30|Methanococcus vannielii

Query: 2 PVRGYYRGA 10
P RGY RG
Sbjct: 120 PRRGYDRGG 128


>sp|PUR7_CENSY|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Cenarchaeum symbiosum (strain A)

Query: 3 VRGYYRGA 10
VRGYY G+
Sbjct: 86 VRGYYYGS 93


>sp|TRM56_IGNH4|TRNA (cytidine(56)-2'-O)-methyltransferase|Ignicoccus hospitalis (strain

Query: 3 VRGYYRGA 10
VRG+ RGA
Sbjct: 202 VRGHKRGA 209


>sp|CBIN_ARCFU|COBALT transport protein CbiN|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GYYRG 9
GYYRG
Sbjct: 76 GYYRG 80




39|Sequence|191|200|YYRGAVGGTF

>sp|MCRC_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 3 RGAVGGTF 10
RGA+G TF
Sbjct: 85 RGALGSTF 92


>sp|FTSZ2_HALVD|CELL division protein FtsZ 2|Haloferax volcanii (strain ATCC 29605

Query: 2 YRGAVGG 8
YRGA GG
Sbjct: 272 YRGASGG 278


>sp|FTSZ2_HALSA|CELL division protein FtsZ 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 YRGAVGG 8
YRGA GG
Sbjct: 271 YRGASGG 277


>sp|FTSZ2_HALS3|CELL division protein FtsZ 2|Halobacterium salinarum (strain ATCC 29341

Query: 2 YRGAVGG 8
YRGA GG
Sbjct: 271 YRGASGG 277


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YRGAVGGT 9
YR A+GGT
Sbjct: 235 YRLAIGGT 242


>sp|ARLY_PYRAE|ARGININOSUCCINATE lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YYRGAVGGT 9
+YR +GGT
Sbjct: 3 FYRSWIGGT 11


>sp|COAD_METBF|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 5 AVGGTF 10
AVGGTF
Sbjct: 5 AVGGTF 10


>sp|COAD_METAC|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 AVGGTF 10
AVGGTF
Sbjct: 5 AVGGTF 10


>sp|COAD_METMA|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 AVGGTF 10
AVGGTF
Sbjct: 5 AVGGTF 10


>sp|COAD_METTH|PHOSPHOPANTETHEINE adenylyltransferase|Methanothermobacter thermautotrophicus

Query: 5 AVGGTF 10
AVGGTF
Sbjct: 9 AVGGTF 14


>sp|MCRG_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 2 YRGAVGGTF 10
YRGA GT
Sbjct: 109 YRGADAGTL 117


>sp|MCRG_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 2 YRGAVGGTF 10
YRGA GT
Sbjct: 109 YRGADAGTL 117


>sp|MCRG_METFE|METHYL-COENZYME M reductase subunit gamma|Methanothermus fervidus

Query: 2 YRGAVGGTF 10
YRGA GT
Sbjct: 109 YRGADAGTL 117


>sp|Y1638_METJA|UNCHARACTERIZED protein MJ1638|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YRGAVGGTF 10
Y+G V G F
Sbjct: 129 YKGVVNGKF 137


>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GAVGGT 9
GA+GGT
Sbjct: 192 GAIGGT 197


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 YYRGAVGGTF 10
YY VGGT
Sbjct: 328 YYPAVVGGTM 337


>sp|Y544_THEVO|UNCHARACTERIZED solute-binding protein TV0544|Thermoplasma volcanium (strain ATCC

Query: 1 YYRGAVGG 8
YY+ A GG
Sbjct: 270 YYKSATGG 277


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 YYRGAVGGTF 10
YY GGT+
Sbjct: 22 YYSSLSGGTY 31




40|Sequence|196|205|VGGTFDRLHN

>sp|COAD_THEGJ|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VGGTFDRLH 9
VGGTFDRLH
Sbjct: 10 VGGTFDRLH 18


>sp|COAD_PYRHO|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VGGTFDRLH 9
VGGTFDRLH
Sbjct: 9 VGGTFDRLH 17


>sp|COAD_PYRFU|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VGGTFDRLH 9
VGGTFDRLH
Sbjct: 10 VGGTFDRLH 18


>sp|COAD_PYRAB|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 VGGTFDRLH 9
VGGTFDRLH
Sbjct: 9 VGGTFDRLH 17


>sp|COAD_THEKO|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 VGGTFDRLH 9
VGGTFDRLH
Sbjct: 10 VGGTFDRLH 18


>sp|COAD_METKA|PHOSPHOPANTETHEINE adenylyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 VGGTFDRLH 9
VGGTFDRLH
Sbjct: 12 VGGTFDRLH 20


>sp|COAD_METTH|PHOSPHOPANTETHEINE adenylyltransferase|Methanothermobacter thermautotrophicus

Query: 1 VGGTFDRLH 9
VGGTFDR H
Sbjct: 10 VGGTFDRFH 18


>sp|COAD_METJA|PHOSPHOPANTETHEINE adenylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VGGTFDRLH 9
VGGTFD LH
Sbjct: 5 VGGTFDILH 13


>sp|COAD_PYRAE|PHOSPHOPANTETHEINE adenylyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VGGTFDRLHN 10
+GGTFD LH+
Sbjct: 10 LGGTFDTLHS 19


>sp|COPP_THEAC|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP

Query: 1 VGGTFDRLH 9
VGGTF +LH
Sbjct: 5 VGGTFSKLH 13


>sp|COPP_THEVO|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP

Query: 1 VGGTFDRLH 9
VGGTF +LH
Sbjct: 5 VGGTFSKLH 13


>sp|COAD_METMA|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VGGTFDRLHN 10
VGGTF LH+
Sbjct: 6 VGGTFQYLHD 15


>sp|COAD_METAC|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VGGTFDRLHN 10
VGGTF LH+
Sbjct: 6 VGGTFQYLHD 15


>sp|Y2121_METS5|PROTEIN Msed_2121|Metallosphaera sedula (strain ATCC 51363

Query: 1 VGGTFDRLHN 10
+GGT DR+ N
Sbjct: 255 LGGTLDRVQN 264


>sp|RIBL_THEKO|FAD synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VGGTFDRLH 9
VGG FD LH
Sbjct: 12 VGGVFDILH 20


>sp|RIBL_PYRAB|FAD synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 VGGTFDRLH 9
VGG FD LH
Sbjct: 11 VGGVFDILH 19


>sp|RIBL_THEGJ|FAD synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VGGTFDRLH 9
VGG FD LH
Sbjct: 14 VGGVFDILH 22


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VGGTFDRLH 9
V G+F+RLH
Sbjct: 382 VQGSFERLH 390


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VGGTFDRLH 9
V G+F+RLH
Sbjct: 382 VQGSFERLH 390


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VGGTFDRLH 9
V G+F+RLH
Sbjct: 382 VQGSFERLH 390


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VGGTFDRLH 9
V G+F+RLH
Sbjct: 382 VQGSFERLH 390


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VGGTFDRLH 9
V G+F+RLH
Sbjct: 382 VQGSFERLH 390


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VGGTFDRLH 9
V G+F+RLH
Sbjct: 382 VQGSFERLH 390


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VGGTFDRLH 9
V G+F+RLH
Sbjct: 382 VQGSFERLH 390


>sp|COAD_ARCFU|PHOSPHOPANTETHEINE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VGGTFDRLH 9
+GGTF+ LH
Sbjct: 5 LGGTFEPLH 13


>sp|RIBL_PYRHO|FAD synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VGGTFDRLH 9
VGG FD +H
Sbjct: 11 VGGVFDIIH 19


>sp|COAD_METBF|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VGGTFDRLHN 10
VGGTF H+
Sbjct: 6 VGGTFQYFHD 15


>sp|RIBL_THEON|FAD synthase|Thermococcus onnurineus (strain NA1)

Query: 2 GGTFDRLH 9
GG FD LH
Sbjct: 14 GGVFDLLH 21


>sp|RIBL_THESM|FAD synthase|Thermococcus sibiricus (strain DSM 12597

Query: 2 GGTFDRLH 9
GG FD LH
Sbjct: 12 GGVFDILH 19


>sp|RIBL_METKA|FAD synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 GGTFDRLH 9
GG FD LH
Sbjct: 8 GGVFDILH 15


>sp|OTC_THEKO|ORNITHINE carbamoyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GGTFDRLHN 10
GG+F+ LH+
Sbjct: 208 GGSFELLHD 216


>sp|OTC_PYRHO|ORNITHINE carbamoyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GGTFDRLHN 10
GG+F+ LH+
Sbjct: 208 GGSFELLHD 216


>sp|OTC_PYRAB|ORNITHINE carbamoyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 GGTFDRLHN 10
GG+F+ LH+
Sbjct: 208 GGSFELLHD 216


>sp|OTCA_PYRFU|ORNITHINE carbamoyltransferase, anabolic|Pyrococcus furiosus (strain ATCC

Query: 2 GGTFDRLHN 10
GG+F+ LH+
Sbjct: 208 GGSFELLHD 216


>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VGGTFDR 7
V GTFDR
Sbjct: 311 VAGTFDR 317


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GTFDRLH 9
G F+RLH
Sbjct: 231 GAFERLH 237


>sp|MCRY_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 3 GTFDRLH 9
G F+RLH
Sbjct: 231 GAFERLH 237


>sp|LIVM_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 1 VGGTFDRL 8
VGG DRL
Sbjct: 48 VGGILDRL 55


>sp|CYAS_METHJ|CYSTEATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VGGTFDRL 8
VGG FD L
Sbjct: 311 VGGVFDTL 318


>sp|MCRB_METFE|METHYL-COENZYME M reductase subunit beta|Methanothermus fervidus

Query: 3 GTFDRLH 9
G F+RLH
Sbjct: 231 GKFERLH 237


>sp|RL18A_THEKO|LARGE ribosomal subunit protein eL20|Thermococcus kodakarensis (strain

Query: 1 VGGTFDRL 8
V GTF+RL
Sbjct: 8 VKGTFERL 15


>sp|MCRB_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GTFDRLH 9
G F+RLH
Sbjct: 234 GLFERLH 240


>sp|MCAL_HALMA|L-MALYL-COA/BETA-METHYLMALYL-COA lyase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VGGTFDRL 8
+GG FD+L
Sbjct: 213 IGGPFDQL 220


>sp|RSMA_METMA|PROBABLE ribosomal RNA small subunit|Methanosarcina mazei (strain ATCC

Query: 2 GGTFDR 7
GGTFD+
Sbjct: 13 GGTFDQ 18


>sp|RSMA_METBF|PROBABLE ribosomal RNA small subunit|Methanosarcina barkeri (strain Fusaro

Query: 2 GGTFDR 7
GGTFD+
Sbjct: 23 GGTFDQ 28


>sp|RSMA_METAC|PROBABLE ribosomal RNA small subunit|Methanosarcina acetivorans (strain

Query: 2 GGTFDR 7
GGTFD+
Sbjct: 13 GGTFDQ 18


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 VGGTFDRLH 9
VGG F LH
Sbjct: 4017 VGGLFGELH 4025




41|Sequence|201|210|DRLHNAHKVL

>sp|COAD_PYRHO|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DRLHNAHKVL 10
DRLH HK L
Sbjct: 14 DRLHLGHKAL 23


>sp|COAD_THEGJ|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DRLHNAHKVL 10
DRLH HK L
Sbjct: 15 DRLHLGHKAL 24


>sp|COAD_PYRAB|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 DRLHNAHKVL 10
DRLH HK L
Sbjct: 14 DRLHLGHKAL 23


>sp|COAD_PYRFU|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DRLHNAHKVL 10
DRLH HK L
Sbjct: 15 DRLHLGHKAL 24


>sp|COAD_THEKO|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 DRLHNAHKVL 10
DRLH HK L
Sbjct: 15 DRLHLGHKAL 24


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DRLHNAHKV 9
D+LH AH +
Sbjct: 380 DKLHIAHHI 388


>sp|TPIS_THEVO|TRIOSEPHOSPHATE isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LHNAHK 8
LHNAH+
Sbjct: 43 LHNAHE 48


>sp|COPP_THEVO|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP

Query: 2 RLHNAHKVL 10
+LH HK L
Sbjct: 11 KLHKGHKAL 19


>sp|COPP_THEAC|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP

Query: 2 RLHNAHKVL 10
+LH HK L
Sbjct: 11 KLHKGHKAL 19


>sp|Y1471_METMP|UNCHARACTERIZED protein MMP1471|Methanococcus maripaludis (strain DSM 14266

Query: 3 LHNAHK 8
LHN HK
Sbjct: 55 LHNGHK 60


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RLHNAHKVL 10
+++N HKVL
Sbjct: 300 KINNHHKVL 308


>sp|PIWI_ARCFU|PIWI protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 HNAHKVL 10
HN H++L
Sbjct: 362 HNVHEIL 368




42|Sequence|206|215|AHKVLLSVAC

>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 HKVLLSVA 9
HK+LL++A
Sbjct: 15 HKILLNIA 22




43|Sequence|211|220|LSVACILAQE

>sp|Y132_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 1 LSVACILAQE 10
L++ACILA +
Sbjct: 143 LAIACILAMK 152


>sp|Y130_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5 /

Query: 1 LSVACILAQE 10
L++ACILA +
Sbjct: 143 LAIACILAMK 152


>sp|Y068_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 1 LSVACILA 8
L++ACILA
Sbjct: 143 LAIACILA 150


>sp|THI4_META3|THIAMINE thiazole synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 SVACILAQE 10
SVAC LA++
Sbjct: 180 SVACTLARK 188




44|Sequence|216|225|ILAQEQLVVG

>sp|Y136_METHJ|UPF0280 protein Mhun_0136|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ILAQEQLVV 9
ILA E+LV+
Sbjct: 16 ILADEELVI 24




45|Sequence|221|230|QLVVGVADKD

>sp|ARFB_META3|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus aeolicus (strain ATCC

Query: 3 VVGVADK 9
V+G+ADK
Sbjct: 166 VIGIADK 172




46|Sequence|226|235|VADKDLLKSK

>sp|Y037_METJA|UNCHARACTERIZED protein MJ0037|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DKDLLKSK 10
D+DLLK K
Sbjct: 140 DRDLLKEK 147




47|Sequence|231|240|LLKSKLLPEL

>sp|DNLI1_METBF|DNA ligase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 LLKSKLLPEL 10
L+KS++LP++
Sbjct: 474 LIKSRMLPDI 483


>sp|PURQ_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LLKSKLLPEL 10
LLK LLP L
Sbjct: 95 LLKGALLPNL 104


>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LLKSKLLPE 9
L+ SKL+PE
Sbjct: 42 LIHSKLIPE 50


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 LLKSKLLPEL 10
+LKS LP+L
Sbjct: 1037 VLKSHFLPDL 1046


>sp|AATD_NATPD|A-TYPE ATP synthase subunit D|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LKSKLLPEL 10
L+ KLLPEL
Sbjct: 169 LEFKLLPEL 177


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 LLKSKLLPEL 10
+LKS LP+L
Sbjct: 1036 VLKSHFLPDL 1045


>sp|DHQS_NITMS|3-DEHYDROQUINATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 SKLLPEL 10
SKLLP+L
Sbjct: 19 SKLLPQL 25


>sp|AATC_METMA|A-TYPE ATP synthase subunit C|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LKSKLLP 8
+KSKLLP
Sbjct: 36 MKSKLLP 42


>sp|AATC_METBF|A-TYPE ATP synthase subunit C|Methanosarcina barkeri (strain Fusaro /

Query: 2 LKSKLLPE 9
+KSKLLP+
Sbjct: 36 MKSKLLPK 43


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LLKSKLLPEL 10
+LKS LP+L
Sbjct: 1043 VLKSHFLPDL 1052


>sp|AATC_METAC|A-TYPE ATP synthase subunit C|Methanosarcina acetivorans (strain ATCC

Query: 2 LKSKLLP 8
+KSKLLP
Sbjct: 36 MKSKLLP 42


>sp|AATD_HALSA|A-TYPE ATP synthase subunit D|Halobacterium salinarum (strain ATCC 700922

Query: 2 LKSKLLPEL 10
L+ KLLPEL
Sbjct: 169 LEFKLLPEL 177


>sp|AATD_HALS3|A-TYPE ATP synthase subunit D|Halobacterium salinarum (strain ATCC 29341

Query: 2 LKSKLLPEL 10
L+ KLLPEL
Sbjct: 169 LEFKLLPEL 177




48|Sequence|236|245|LLPELLQPYT

>sp|SYS_METAR|SERINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LLPELLQPY 9
L+PE+L+PY
Sbjct: 410 LIPEVLRPY 418


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LPELLQPY 9
LPELL+PY
Sbjct: 496 LPELLKPY 503


>sp|SYS_HALSA|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LPELLQPY 9
+PE LQPY
Sbjct: 428 VPEALQPY 435


>sp|SYS_HALS3|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LPELLQPY 9
+PE LQPY
Sbjct: 428 VPEALQPY 435


>sp|MBLFP_SULTO|METALLO-BETA-LACTAMASE fold-containing protein ST1585|Sulfurisphaera tokodaii (strain

Query: 1 LLPELLQPY 9
LLPELLQ Y
Sbjct: 66 LLPELLQVY 74


>sp|SYS_PICTO|SERINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 LPELLQPYT 10
+PE+L PYT
Sbjct: 426 IPEVLIPYT 434


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 LPELLQPY 9
LPE+L+PY
Sbjct: 501 LPEMLKPY 508


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 LPELLQPY 9
LP++L+PY
Sbjct: 502 LPQMLEPY 509


>sp|SYS_HALWD|SERINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LPELLQPY 9
+PE LQPY
Sbjct: 429 IPEPLQPY 436


>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 2 LPELLQPY 9
LPELL PY
Sbjct: 502 LPELLDPY 509


>sp|ILVC_CALMQ|KETOL-ACID reductoisomerase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 1 LLPELLQP 8
LLP+++QP
Sbjct: 79 LLPDMVQP 86


>sp|ILVC_PYRFU|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LLPELLQP 8
L+P+L+QP
Sbjct: 83 LIPDLVQP 90


>sp|SYS_THEVO|SERINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LPELLQPYT 10
+P++L PYT
Sbjct: 425 IPDVLVPYT 433


>sp|SYS_THEAC|SERINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LPELLQPYT 10
+P++L PYT
Sbjct: 425 IPDVLVPYT 433


>sp|SYS_METMA|SERINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LPELLQPY 9
+PE+L+PY
Sbjct: 403 IPEVLRPY 410


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LPELLQPY 9
+PE+L+PY
Sbjct: 403 IPEVLRPY 410


>sp|ILVC_PYRAB|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 1 LLPELLQP 8
L+P+L+QP
Sbjct: 83 LIPDLVQP 90


>sp|SYS_METAC|SERINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LPELLQPY 9
+PE+L+PY
Sbjct: 404 IPEVLRPY 411


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 2 LPELLQPY 9
LP++L+PY
Sbjct: 502 LPDMLKPY 509


>sp|Y2205_ARCFU|UNCHARACTERIZED protein AF_2205|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PELLQPYT 10
PE LQP++
Sbjct: 387 PERLQPFS 394


>sp|DAPA_METBU|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LLPELLQPYT 10
+LP L+ P+T
Sbjct: 5 VLPALITPFT 14


>sp|ILVC_METTP|KETOL-ACID reductoisomerase (NADP(+))|Methanothrix thermoacetophila (strain

Query: 1 LLPELLQP 8
LLP+ LQP
Sbjct: 80 LLPDELQP 87


>sp|Y3581_PYRAE|UPF0210 protein PAE3581|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LPELLQPY 9
L ELL+PY
Sbjct: 46 LEELLEPY 53


>sp|SODF_METTM|SUPEROXIDE dismutase [Fe]|Methanothermobacter marburgensis (strain ATCC

Query: 2 LPELLQPY 9
LPEL PY
Sbjct: 8 LPELPYPY 15


>sp|DNLI_NANEQ|DNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 LPELLQPY 9
L ELL+PY
Sbjct: 487 LTELLKPY 494


>sp|SYS_HALLT|SERINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 LPELLQPY 9
+PE L+PY
Sbjct: 428 VPEALRPY 435


>sp|ILVC_ARCFU|KETOL-ACID reductoisomerase (NAD(P)(+))|Archaeoglobus fulgidus (strain ATCC

Query: 1 LLPELLQP 8
L+P+++QP
Sbjct: 81 LIPDMVQP 88


>sp|SODF_METTH|SUPEROXIDE dismutase [Fe]|Methanothermobacter thermautotrophicus (strain

Query: 2 LPELLQPY 9
LPEL PY
Sbjct: 11 LPELPYPY 18


>sp|DCDB_METHJ|DCTP deaminase, dUMP-forming|Methanospirillum hungatei JF-1 (strain

Query: 3 PELLQP 8
PEL+QP
Sbjct: 24 PELIQP 29


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 LLPELLQPY 9
L+P+L+ PY
Sbjct: 160 LVPKLMNPY 168


>sp|AROD_PYRAB|3-DEHYDROQUINATE dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 4 ELLQPYT 10
ELL+PY+
Sbjct: 40 ELLEPYS 46


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 LLPELLQPYT 10
L+P++ PYT
Sbjct: 891 LIPQVDMPYT 900


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 LLPELLQPYT 10
L+P++ PYT
Sbjct: 891 LIPQVDMPYT 900


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LLPELLQPYT 10
+LP +PYT
Sbjct: 396 ILPHTRKPYT 405


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 ELLQPY 9
E+LQPY
Sbjct: 488 EMLQPY 493




49|Sequence|241|250|LQPYTERVEH

>sp|SECY_ARCFU|PROTEIN translocase subunit SecY|Archaeoglobus fulgidus (strain ATCC

Query: 1 LQPYTERV 8
LQPY ER+
Sbjct: 8 LQPYFERI 15


>sp|BASB_HALS3|CHEMOTACTIC signal transduction system substrate-binding|Halobacterium

Query: 1 LQPYTE 6
LQPYTE
Sbjct: 303 LQPYTE 308


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LQPYTERVEH 10
+ PY ER++H
Sbjct: 498 VNPYAERLKH 507


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 2 QPYTERVEH 10
+PY E++EH
Sbjct: 196 RPYREKLEH 204


>sp|TYSY_METBF|PUTATIVE thymidylate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PYTERVEH 10
PYT+R+ H
Sbjct: 55 PYTDRIPH 62


>sp|FRHG_METJA|COENZYME F420 hydrogenase subunit gamma|Methanocaldococcus jannaschii

Query: 1 LQPYTERVE 9
LQPY E E
Sbjct: 150 LQPYAELAE 158


>sp|G6PI_HALSA|PROBABLE glucose-6-phosphate isomerase|Halobacterium salinarum (strain ATCC

Query: 3 PYTERVE 9
PY ER+E
Sbjct: 254 PYAERLE 260


>sp|END3_METJA|ENDONUCLEASE III|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PYTERVEH 10
PY E+++H
Sbjct: 202 PYYEKIKH 209


>sp|G6PI_HALMA|PROBABLE glucose-6-phosphate isomerase|Haloarcula marismortui (strain ATCC

Query: 1 LQPYTERVE 9
+ PY ER+E
Sbjct: 252 VMPYAERLE 260


>sp|PELO_STAMF|PROTEIN pelota homolog|Staphylothermus marinus (strain ATCC 43588

Query: 1 LQPYTERV 8
QP+TER+
Sbjct: 68 FQPFTERL 75


>sp|PUS10_PYRFU|TRNA pseudouridine synthase Pus10|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LQPYTERVE 9
++P++E+VE
Sbjct: 146 VEPFSEKVE 154




50|Sequence|246|255|ERVEHLSEFL

>sp|PORA_METBF|PYRUVATE synthase subunit PorA|Methanosarcina barkeri (strain Fusaro /

Query: 3 VEHLSEFL 10
VEHLS+F+
Sbjct: 43 VEHLSQFM 50


>sp|MFNA_THEGJ|PROBABLE L-aspartate decarboxylase|Thermococcus gammatolerans (strain DSM

Query: 2 RVEHLSEFL 10
R EHL EFL
Sbjct: 366 RREHLEEFL 374


>sp|MFNA_THEKO|L-ASPARTATE decarboxylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 EHLSEFL 10
EHL EFL
Sbjct: 368 EHLEEFL 374


>sp|OGT_THEGJ|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ERVEHLSEFL 10
ER+ +L+EFL
Sbjct: 38 ERIRNLAEFL 47


>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 1 ERVEHLSEFL 10
ER+E L E+L
Sbjct: 14 ERIEDLDEYL 23


>sp|Y1286_METJA|UNCHARACTERIZED protein MJ1286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ERVEHLSEF 9
E+VE LSEF
Sbjct: 231 EKVEILSEF 239


>sp|MFNA_METST|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaera stadtmanae

Query: 4 EHLSEFL 10
EH+ EFL
Sbjct: 372 EHIDEFL 378


>sp|HDRD_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina thermophila

Query: 3 VEHLSEFL 10
V H+SEFL
Sbjct: 267 VVHVSEFL 274


>sp|GCSH_NATPD|PROBABLE glycine cleavage system H|Natronomonas pharaonis (strain ATCC

Query: 1 ERVEHLSEF 9
+R+EH +EF
Sbjct: 50 DRIEHEAEF 58


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 ERVEHLSEF 9
ER +HL EF
Sbjct: 327 ERYKHLGEF 335


>sp|KTHY_METVS|PROBABLE thymidylate kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ERVEHLSE 8
+RVEH+SE
Sbjct: 64 DRVEHVSE 71


>sp|KTHY_METMP|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ERVEHLSE 8
+RVEH+S+
Sbjct: 64 DRVEHVSK 71




51|Sequence|251|260|LSEFLVDIKP

>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SEFLVDIK 9
SEF+ DIK
Sbjct: 1070 SEFITDIK 1077


>sp|ENDA_ARCFU|TRNA-SPLICING endonuclease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SEFLVDI 8
SE+LVDI
Sbjct: 258 SEYLVDI 264


>sp|NADK_METBF|NAD kinase|Methanosarcina barkeri (strain Fusaro /

Query: 4 FLVDIKP 10
FLVD++P
Sbjct: 94 FLVDVEP 100


>sp|NADK_METMA|NAD kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 FLVDIKP 10
FLVD++P
Sbjct: 108 FLVDVEP 114


>sp|Y1662_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 LSEFLVDIKP 10
L+EFL +KP
Sbjct: 232 LNEFLKKMKP 241


>sp|NADK_METAC|NAD kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 FLVDIKP 10
FLVD++P
Sbjct: 94 FLVDVEP 100


>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 LSEFLVDI 8
L+E+LVD+
Sbjct: 303 LAEYLVDV 310


>sp|MUTS2_PYRFU|DNA-BINDING protein MutS2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LSEFLVDIKP 10
L E+L+ I+P
Sbjct: 61 LEEYLLSIRP 70




52|Sequence|256|265|VDIKPSLTFD

>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 VDIKPSLTFD 10
VDI+PS+ F+
Sbjct: 528 VDIRPSVVFE 537


>sp|MVK_AERPE|MEVALONATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VDIKPSLT 8
VDI+P LT
Sbjct: 173 VDIRPGLT 180


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 VDIKPSLTFD 10
V+I P LT+D
Sbjct: 154 VEIHPGLTWD 163


>sp|CAS1_HYPBU|CRISPR-ASSOCIATED endonuclease Cas1|Hyperthermus butylicus (strain DSM 5456

Query: 4 KPSLTFD 10
+PSLT+D
Sbjct: 234 RPSLTYD 240


>sp|SIHH_METMA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VDIKPSLTFD 10
+DI+P +T D
Sbjct: 111 LDIEPDITID 120


>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VDIKPSLTFD 10
+DI+P +T D
Sbjct: 111 LDIEPDITID 120


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 1 VDIKPSLT 8
+DI+PSL+
Sbjct: 341 IDIRPSLS 348


>sp|FEN_METST|FLAP endonuclease 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DIKPSLTFD 10
DIKP FD
Sbjct: 72 DIKPVYVFD 80


>sp|FEN_METS3|FLAP endonuclease 1|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DIKPSLTFD 10
DIKP FD
Sbjct: 72 DIKPIYVFD 80


>sp|RLME_METAR|RIBOSOMAL RNA large subunit methyltransferase|Methanocella arvoryzae (strain

Query: 2 DIKPSLTF 9
D+KPS F
Sbjct: 241 DVKPSFAF 248


>sp|RLME_METBU|RIBOSOMAL RNA large subunit methyltransferase|Methanococcoides burtonii

Query: 1 VDIKPSLTF 9
VD+KP F
Sbjct: 242 VDVKPEFAF 250


>sp|KPYK_THEAC|PYRUVATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DIKPSL 7
DIKPSL
Sbjct: 497 DIKPSL 502


>sp|AATE_ARCFU|A-TYPE ATP synthase subunit E|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DIKPSLTFD 10
DI+ +LTFD
Sbjct: 160 DIRLNLTFD 168


>sp|Y421_METJA|UNCHARACTERIZED protein MJ0421|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDIKPSLTF 9
VD+ P +TF
Sbjct: 314 VDLAPHMTF 322


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 3 IKPSLTF 9
IKPS+T+
Sbjct: 325 IKPSITY 331




53|Sequence|261|270|SLTFDVIPLL

>sp|DAPF_ARCFU|DIAMINOPIMELATE epimerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SLTFDVIPL 9
SL FD++PL
Sbjct: 168 SLDFDIVPL 176


>sp|MOAC_PYRFU|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrococcus furiosus

Query: 3 TFDVIPL 9
TFD+IPL
Sbjct: 67 TFDIIPL 73


>sp|MFNE_METJA|[5-(AMINOMETHYL)FURAN-3-YL]METHYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SLTFDVIPLL 10
SLT+D PLL
Sbjct: 9 SLTYDAKPLL 18


>sp|PELO_PYRNV|PROTEIN pelota homolog|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 TFDVIP 8
TFDV+P
Sbjct: 96 TFDVVP 101


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SLTFDVIPL 9
SLT D+IPL
Sbjct: 520 SLTPDLIPL 528


>sp|CAS1B_METRM|CRISPR-ASSOCIATED protein Cas1 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 SLTFDVIPLL 10
S+TFD + LL
Sbjct: 46 SITFDALTLL 55


>sp|COFH_HALSA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Halobacterium salinarum (strain ATCC

Query: 1 SLTFDVIP 8
+L FDV+P
Sbjct: 6 ALDFDVVP 13


>sp|CDC65_HALSA|ORC1-TYPE DNA replication protein 5|Halobacterium salinarum (strain ATCC

Query: 1 SLTFDVIPLL 10
+LT DV+PL+
Sbjct: 239 ALTDDVLPLV 248


>sp|Y2029_AERPE|UPF0284 protein APE_2029.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 LTFDVIPL 9
LT DV+P+
Sbjct: 68 LTLDVVPV 75


>sp|Y534_THEGJ|UPF0284 protein TGAM_0534|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LTFDVIPL 9
LT DVIP+
Sbjct: 47 LTIDVIPV 54


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 1 SLTFDVI 7
SLTFD++
Sbjct: 59 SLTFDIL 65




54|Sequence|266|275|VIPLLDPYGP

>sp|TSGAD_HALVD|PUTATIVE ABC transporter glucose-binding protein|Haloferax volcanii (strain

Query: 2 IPLLDPYGP 10
+P+LD +GP
Sbjct: 328 VPMLDEWGP 336


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PLLDPYG 9
P LDPYG
Sbjct: 382 PRLDPYG 388


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 3 PLLDPYG 9
P LDPYG
Sbjct: 382 PRLDPYG 388


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PLLDPYG 9
P LDPYG
Sbjct: 382 PRLDPYG 388


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 3 PLLDPYG 9
P LDPYG
Sbjct: 387 PRLDPYG 393


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 3 PLLDPYG 9
P LDPYG
Sbjct: 382 PHLDPYG 388


>sp|RRP4_METST|EXOSOME complex component Rrp4|Methanosphaera stadtmanae (strain ATCC

Query: 1 VIPLLDPYGP 10
VIPL D Y P
Sbjct: 51 VIPLKDTYSP 60


>sp|HELS_METVS|ATP-DEPENDENT DNA helicase Hel308|Methanococcus vannielii (strain ATCC 35089

Query: 3 PLLDPYG 9
P LDPYG
Sbjct: 385 PGLDPYG 391


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PLLDPYG 9
P LDPYG
Sbjct: 880 PGLDPYG 886


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 3 PLLDPYG 9
P LDPYG
Sbjct: 394 PGLDPYG 400


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 3 PLLDPYG 9
P LDPYG
Sbjct: 394 PGLDPYG 400


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 PLLDPYG 9
P LDPYG
Sbjct: 380 PGLDPYG 386


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 3 PLLDPYG 9
P LDPYG
Sbjct: 386 PGLDPYG 392


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 3 PLLDPYG 9
P LDPYG
Sbjct: 375 PRLDPYG 381


>sp|HELS_CALMQ|ATP-DEPENDENT DNA helicase Hel308|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 PLLDPYG 9
P LDPYG
Sbjct: 386 PGLDPYG 392


>sp|SPEE1_HYPBU|POLYAMINE aminopropyltransferase 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 VIPLLDPYGP 10
++ L DP+GP
Sbjct: 161 IMDLTDPFGP 170


>sp|RRP4_PYRHO|EXOSOME complex component Rrp4|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VIPLLDPYGP 10
VIPL PY P
Sbjct: 53 VIPLEGPYIP 62


>sp|RRP4_PYRFU|EXOSOME complex component Rrp4|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VIPLLDPYGP 10
VIPL PY P
Sbjct: 53 VIPLEGPYIP 62


>sp|TRM10_SULAC|TRNA (adenine(9)-N1)-methyltransferase|Sulfolobus acidocaldarius (strain

Query: 4 LLDPYG 9
+LDPYG
Sbjct: 157 ILDPYG 162


>sp|RRP4_THEKO|EXOSOME complex component Rrp4|Thermococcus kodakarensis (strain ATCC

Query: 1 VIPLLDPYGP 10
VIPL PY P
Sbjct: 53 VIPLEGPYIP 62


>sp|RRP4_PYRAB|EXOSOME complex component Rrp4|Pyrococcus abyssi (strain GE5 /

Query: 1 VIPLLDPYGP 10
VIPL PY P
Sbjct: 53 VIPLEGPYIP 62


>sp|MTD_METST|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaera

Query: 1 VIPLLDPYGP 10
V+P +D Y P
Sbjct: 51 VLPKIDEYNP 60


>sp|RL4_METMA|LARGE ribosomal subunit protein uL4|Methanosarcina mazei (strain ATCC

Query: 5 LDPYGP 10
L PYGP
Sbjct: 44 LQPYGP 49


>sp|RL4_METBF|LARGE ribosomal subunit protein uL4|Methanosarcina barkeri (strain

Query: 5 LDPYGP 10
L PYGP
Sbjct: 44 LQPYGP 49


>sp|RL4_METAC|LARGE ribosomal subunit protein uL4|Methanosarcina acetivorans (strain

Query: 5 LDPYGP 10
L PYGP
Sbjct: 44 LQPYGP 49


>sp|SRP54_THEKO|SIGNAL recognition particle 54 kDa|Thermococcus kodakarensis (strain ATCC

Query: 4 LLDPYG 9
LLDP+G
Sbjct: 150 LLDPFG 155


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 IPLLDPYGP 10
+P+L P GP
Sbjct: 343 LPILCPVGP 351


>sp|PSB1_PYRHO|PROTEASOME subunit beta 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 LDPYG 9
LDPYG
Sbjct: 119 LDPYG 123


>sp|RRP4_METKA|EXOSOME complex component Rrp4|Methanopyrus kandleri (strain AV19 /

Query: 1 VIPLLDPYGP 10
VIPL PY P
Sbjct: 55 VIPLAGPYRP 64


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 VIPLLDP 7
+IPL DP
Sbjct: 452 IIPLYDP 458


>sp|MOAA_METAC|PROBABLE GTP 3',8-cyclase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 LLDPYG 9
L+DPYG
Sbjct: 21 LVDPYG 26


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 2 IPLLDPYGP 10
+PLL+P P
Sbjct: 140 VPLLEPSNP 148


>sp|APGM_PICTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Picrophilus torridus (strain ATCC 700027

Query: 4 LLDPYGP 10
L+DP GP
Sbjct: 45 LMDPVGP 51


>sp|MOAA_METMA|PROBABLE GTP 3',8-cyclase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LLDPYG 9
L+DPYG
Sbjct: 21 LVDPYG 26


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VIPLLDPYGP 10
++P+L GP
Sbjct: 352 IVPILSKLGP 361


>sp|RL15E_METJA|LARGE ribosomal subunit protein eL15|Methanocaldococcus jannaschii

Query: 4 LLDPYGP 10
L+DPY P
Sbjct: 132 LVDPYHP 138


>sp|MVK_AERPE|MEVALONATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VIPLLDPY 8
V P+L+PY
Sbjct: 70 VSPVLEPY 77


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 2 IPLLDPYG 9
I L DPYG
Sbjct: 206 IVLKDPYG 213


>sp|TRM1_METKA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanopyrus kandleri

Query: 5 LDPYGP 10
+DP+GP
Sbjct: 127 IDPFGP 132


>sp|MFNB_METMA|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IPLLDPYGP 10
IPLL+ GP
Sbjct: 194 IPLLERIGP 202


>sp|RL4_METTP|LARGE ribosomal subunit protein uL4|Methanothrix thermoacetophila

Query: 5 LDPYGP 10
L PYGP
Sbjct: 43 LQPYGP 48


>sp|APGM_METS5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VIPLLDPYGP 10
++ L+DP GP
Sbjct: 44 LVGLMDPIGP 53


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 VIPLLDPYG 9
++ L DPYG
Sbjct: 175 ILDLTDPYG 183


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VIPLLDPY 8
V+PL+D Y
Sbjct: 192 VVPLMDAY 199


>sp|TRM1_HALLT|TRNA (guanine(26)-N(2))-dimethyltransferase|Halorubrum lacusprofundi

Query: 5 LDPYG 9
LDPYG
Sbjct: 123 LDPYG 127




55|Sequence|271|280|DPYGPAGSDP

>sp|COAD_PYRAE|PHOSPHOPANTETHEINE adenylyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DPYGPAGSDP 10
DPYGPA DP
Sbjct: 83 DPYGPAVFDP 92


>sp|COAD_METBF|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DPYGPA 6
DPYGPA
Sbjct: 80 DPYGPA 85


>sp|AATD_AERPE|A-TYPE ATP synthase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 5 PAGSDP 10
PAGSDP
Sbjct: 121 PAGSDP 126


>sp|TRPA_NATPD|TRYPTOPHAN synthase alpha chain|Natronomonas pharaonis (strain ATCC 35678

Query: 3 YGPAGSDP 10
YGPAGS P
Sbjct: 99 YGPAGSQP 106


>sp|MPGS_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 YGPAGSDP 10
Y PAG+DP
Sbjct: 362 YRPAGTDP 369


>sp|SRP54_METKA|SIGNAL recognition particle 54 kDa|Methanopyrus kandleri (strain AV19 /

Query: 1 DPYGPAGSD 9
DPY PA +
Sbjct: 138 DPYRPAAGE 146


>sp|ARDF_PYRFU|ARCHAEAL ribosome dimerization factor|Pyrococcus furiosus (strain ATCC

Query: 2 PYGPAGS 8
PY P GS
Sbjct: 43 PYAPEGS 49


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 PYGPAGSDP 10
PY P G P
Sbjct: 9 PYKPLGDQP 17


>sp|CDC6N_HALMA|ORC1-TYPE DNA replication protein 14|Haloarcula marismortui (strain ATCC

Query: 3 YGPAGS 8
YGPAG+
Sbjct: 57 YGPAGT 62


>sp|KCY_PYRHO|CYTIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DPYGPAGS 8
DP G AGS
Sbjct: 178 DPVGDAGS 185


>sp|KCY_PYRFU|CYTIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DPYGPAGS 8
DP G AGS
Sbjct: 178 DPVGDAGS 185


>sp|HACA_METMA|PROBABLE methanogen homoaconitase large subunit|Methanosarcina mazei (strain

Query: 2 PYGPAGSDP 10
PY P SDP
Sbjct: 220 PYEPVYSDP 228


>sp|MCRW_METFV|METHYL-COENZYME M reductase II operon|Methanothermus fervidus (strain ATCC 43054

Query: 2 PYGPA 6
PYGPA
Sbjct: 53 PYGPA 57


>sp|THSB_DESM0|CHAPERONIN subunit beta|Desulfurococcus mucosus (strain ATCC 35584

Query: 3 YGPAGSD 9
YGP G D
Sbjct: 44 YGPKGMD 50


>sp|THSB_AERPE|THERMOSOME subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 3 YGPAGSD 9
YGP G D
Sbjct: 50 YGPKGMD 56


>sp|RNZ_CENSY|RIBONUCLEASE Z|Cenarchaeum symbiosum (strain A)

Query: 3 YGPAGSD 9
YGP G+D
Sbjct: 88 YGPPGTD 94


>sp|TRPD_METKA|ANTHRANILATE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 DPYGPAGSDP 10
DP AG+DP
Sbjct: 260 DPKDVAGADP 269


>sp|CDC65_HALSA|ORC1-TYPE DNA replication protein 5|Halobacterium salinarum (strain ATCC

Query: 3 YGPAGS 8
YGPAG+
Sbjct: 57 YGPAGT 62


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YGPAGSD 9
YGP G D
Sbjct: 50 YGPRGMD 56


>sp|THSB_SULAC|CHAPERONIN subunit beta|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YGPAGSD 9
YGP G D
Sbjct: 50 YGPRGMD 56


>sp|THSB_SACS2|CHAPERONIN subunit beta|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 YGPAGSD 9
YGP G D
Sbjct: 49 YGPRGMD 55


>sp|THSB_SACSH|CHAPERONIN subunit beta|Saccharolobus shibatae (strain ATCC 51178

Query: 3 YGPAGSD 9
YGP G D
Sbjct: 49 YGPRGMD 55


>sp|RSAMH_PYRHO|(R)-S-ADENOSYL-L-METHIONINE hydrolase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DPYGPAGS 8
D +GPAG+
Sbjct: 130 DIFGPAGA 137


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DPYGPAGS 8
D YG AGS
Sbjct: 1497 DDYGEAGS 1504




56|Sequence|276|285|AGSDPSLEFL

>sp|TRET_THELN|TREHALOSE synthase|Thermococcus litoralis (strain ATCC 51850

Query: 3 SDPSLEF 9
SDP+LEF
Sbjct: 157 SDPNLEF 163


>sp|TRET_PYRFU|TREHALOSE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SDPSLEF 9
SDP+LEF
Sbjct: 157 SDPNLEF 163


>sp|RNP1_AERPE|RIBONUCLEASE P protein component 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 AGSDPSLEFL 10
A SDPSLE L
Sbjct: 26 AHSDPSLEGL 35


>sp|HERA_SULTO|DNA double-strand break repair helicase|Sulfurisphaera tokodaii (strain

Query: 1 AGSDPSL 7
AGSDP+L
Sbjct: 467 AGSDPNL 473


>sp|PUS10_VULDI|TRNA pseudouridine synthase Pus10|Vulcanisaeta distributa (strain DSM

Query: 1 AGSDPSLEFL 10
+G +PS++FL
Sbjct: 71 SGHEPSIKFL 80


>sp|AATD_AERPE|A-TYPE ATP synthase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 1 AGSDPSL 7
AGSDP L
Sbjct: 122 AGSDPKL 128


>sp|ASSY_SACS2|ARGININOSUCCINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 SDPSLE 8
SDPSLE
Sbjct: 187 SDPSLE 192


>sp|WECC_PYRHO|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AGSDPSLEFL 10
+G DP L +L
Sbjct: 88 SGDDPDLSYL 97


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 2 GSDPSLE 8
G DPSLE
Sbjct: 34 GYDPSLE 40


>sp|IDI2_HALSA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 4 DPSLEFL 10
DPS++FL
Sbjct: 51 DPSIDFL 57




57|Sequence|281|290|SLEFLVVSEE

>sp|COAD_THEKO|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SLEFLVVSEE 10
SLE +VVSEE
Sbjct: 93 SLEAIVVSEE 102


>sp|COAD_THEGJ|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 SLEFLVVSEE 10
SLE +VVSEE
Sbjct: 93 SLEAIVVSEE 102


>sp|COAD_PYRAB|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 SLEFLVVSEE 10
SLE +VVSEE
Sbjct: 92 SLEAIVVSEE 101


>sp|COAD_PYRHO|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SLEFLVVSEE 10
SLE +VVSEE
Sbjct: 92 SLEAIVVSEE 101


>sp|COAD_PYRFU|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SLEFLVVSEE 10
SLE +VVSEE
Sbjct: 93 SLEAIVVSEE 102


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 SLEFLVVSE 9
SL+FLVV +
Sbjct: 408 SLDFLVVQD 416




58|Sequence|286|295|VVSEETYRGG

>sp|COAD_PYRAB|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 VVSEETYRGG 10
VVSEETY+G
Sbjct: 97 VVSEETYKGA 106


>sp|COAD_THEKO|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VVSEETYRGG 10
VVSEETY+G
Sbjct: 98 VVSEETYKGA 107


>sp|COAD_PYRHO|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VVSEETYRGG 10
VVSEETY+G
Sbjct: 97 VVSEETYKGA 106


>sp|COAD_THEGJ|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VVSEETYRGG 10
VVSEETY+G
Sbjct: 98 VVSEETYKGA 107


>sp|COAD_PYRFU|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVSEETYRGG 10
VVSEETY+G
Sbjct: 98 VVSEETYKGA 107


>sp|ILVD_METKA|DIHYDROXY-ACID dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 2 VSEETYRGG 10
VS E YRGG
Sbjct: 477 VSPEAYRGG 485


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VVSEETYRGG 10
VVSE T RGG
Sbjct: 398 VVSETTDRGG 407


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 VVSEETYRG 9
VVSEE YR
Sbjct: 249 VVSEEAYRN 257


>sp|CBIT_SULAC|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 VVSEETYRGG 10
VVSE+ RGG
Sbjct: 124 VVSEKIRRGG 133


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VVSEETYR 8
VVS+E YR
Sbjct: 256 VVSKEAYR 263


>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 VSEETYRGG 10
VSEE RGG
Sbjct: 517 VSEECVRGG 525


>sp|UPP_PYRAE|URACIL phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VSEETYRGG 10
V EE YR G
Sbjct: 145 VIEEVYRAG 153


>sp|MPTA_HALMA|GTP cyclohydrolase MptA|Haloarcula marismortui (strain ATCC 43049

Query: 2 VSEETYR 8
VSEE YR
Sbjct: 77 VSEEAYR 83


>sp|PHNC2_HALMA|PHOSPHONATES import ATP-binding protein PhnC|Haloarcula marismortui (strain ATCC

Query: 4 EETYRGG 10
+E YRGG
Sbjct: 239 DEIYRGG 245




59|Sequence|291|300|TYRGGMAINR

>sp|Y963_METJA|UNCHARACTERIZED protein MJ0963|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YRGGMAINR 10
YRGG+ I R
Sbjct: 432 YRGGLGIRR 440


>sp|COAD_PYRHO|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TYRGGMAINR 10
TY+G + +NR
Sbjct: 102 TYKGALIVNR 111


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 TYRGGMA 7
TYRGG+A
Sbjct: 347 TYRGGIA 353


>sp|COAD_THEKO|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TYRGGMAINR 10
TY+G + +NR
Sbjct: 103 TYKGALIVNR 112


>sp|CBIM1_METPE|PUTATIVE cobalt transport protein CbiM|Methanosphaerula palustris (strain

Query: 2 YRGGMAIN 9
Y+GG AIN
Sbjct: 127 YQGGKAIN 134


>sp|COAD_PYRAB|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 TYRGGMAINR 10
TY+G + +NR
Sbjct: 102 TYKGALLVNR 111


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 TYRGGMAI 8
T RGGMA+
Sbjct: 238 TVRGGMAL 245


>sp|COAD_THEGJ|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 TYRGGMAINR 10
TY+G + +NR
Sbjct: 103 TYKGALLVNR 112


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 TYRGGMAI 8
T RGGMA+
Sbjct: 237 TVRGGMAL 244


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RGGMAINR 10
RGG+ IN+
Sbjct: 648 RGGLKINK 655


>sp|Y820_METJA|PUTATIVE uncharacterized protein MJ0820|Methanocaldococcus jannaschii

Query: 1 TYRGGMAINR 10
+Y GG INR
Sbjct: 35 SYVGGKPINR 44


>sp|RS3_METAR|SMALL ribosomal subunit protein uS3|Methanocella arvoryzae (strain DSM

Query: 4 GGMAINR 10
GGM INR
Sbjct: 31 GGMEINR 37


>sp|KAE1B_METTH|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 GGMAINR 10
GG+A+NR
Sbjct: 253 GGVAVNR 259


>sp|RS3_METBU|SMALL ribosomal subunit protein uS3|Methanococcoides burtonii (strain

Query: 4 GGMAINR 10
GGM INR
Sbjct: 31 GGMDINR 37


>sp|COAD_PYRFU|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TYRGGMAINR 10
TY+G + +N+
Sbjct: 103 TYKGAVLVNK 112




60|Sequence|296|305|MAINRFRLEN

>sp|RIBA_ARCFU|GTP cyclohydrolase-2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MAINRFRLEN 10
+ +NRFR +N
Sbjct: 58 LGLNRFRFQN 67


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 2 AINRFRLEN 10
AINR LEN
Sbjct: 1048 AINRVGLEN 1056


>sp|SAHH_THEAC|ADENOSYLHOMOCYSTEINASE acidophilum (strain ATCC 25905

Query: 3 INRFRLEN 10
+ R+RLEN
Sbjct: 311 VKRYRLEN 318


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 3 INRFRLEN 10
+ R+RLEN
Sbjct: 311 VKRYRLEN 318


>sp|RNP3_METMA|RIBONUCLEASE P protein component 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AINRFRLEN 10
A+NR LEN
Sbjct: 96 AVNRAALEN 104


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 AINRFRLEN 10
A++RF +EN
Sbjct: 648 AVSRFLMEN 656


>sp|RNP3_METAC|RIBONUCLEASE P protein component 3|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AINRFRLEN 10
A+NR LEN
Sbjct: 96 AVNRAALEN 104




61|Sequence|301|310|FRLENDLEEL

>sp|CPGS_THEKO|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus kodakarensis

Query: 3 LENDLEEL 10
LEND+EE+
Sbjct: 66 LENDVEEV 73


>sp|DCDB_METVS|DCTP deaminase, dUMP-forming|Methanococcus vannielii (strain ATCC 35089

Query: 3 LENDLEE 9
ENDLEE
Sbjct: 200 FENDLEE 206


>sp|PGK_NATPD|PHOSPHOGLYCERATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 RLENDLEEL 10
R+E+DLE+L
Sbjct: 283 RVEHDLEDL 291


>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RLENDLE 8
+LENDLE
Sbjct: 175 QLENDLE 181


>sp|GCSPA_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 FRLENDLEE 9
FRLE D+ E
Sbjct: 376 FRLERDVME 384


>sp|Y3533_METJA|UNCHARACTERIZED protein MJECL33|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FRLENDLEE 9
F L+ND+EE
Sbjct: 160 FYLDNDVEE 168


>sp|Y1318_METJA|UNCHARACTERIZED protein MJ1318|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LENDLE 8
LENDLE
Sbjct: 444 LENDLE 449


>sp|PURL_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus abyssi (strain GE5 /

Query: 2 RLENDLEEL 10
++E D+EEL
Sbjct: 683 KVEKDIEEL 691




62|Sequence|306|315|DLEELALYQI

>sp|RNZ_SULAC|RIBONUCLEASE Z|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DLEELALYQI 10
D++ LALY I
Sbjct: 248 DVKRLALYHI 257


>sp|TRPB_METKA|TRYPTOPHAN synthase beta chain|Methanopyrus kandleri (strain AV19 /

Query: 1 DLEELALYQI 10
D EE+ALY +
Sbjct: 248 DDEEVALYAV 257




63|Sequence|311|320|ALYQIQLLKD

>sp|PCNA2_SULOH|DNA polymerase sliding clamp 2|Sulfurisphaera ohwakuensis

Query: 1 ALYQIQLLKD 10
A+Y I++LKD
Sbjct: 198 AVYSIEVLKD 207


>sp|PCNA2_SULTO|DNA polymerase sliding clamp 2|Sulfurisphaera tokodaii (strain DSM

Query: 1 ALYQIQLLKD 10
A+Y I++LKD
Sbjct: 198 AVYSIEVLKD 207


>sp|ARADH_SACS2|D-ARABINOSE 1-dehydrogenase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 1 ALYQIQLLK 9
A+Y IQ+LK
Sbjct: 188 AVYTIQILK 196


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 2 LYQIQLLKD 10
L QI++LKD
Sbjct: 99 LVQIEMLKD 107


>sp|CMR6_SACS2|CRISPR system CMR subunit Cmr6|Saccharolobus solfataricus (strain ATCC

Query: 3 YQIQLLKD 10
YQI +LKD
Sbjct: 56 YQIIILKD 63


>sp|PFDA_CENSY|PREFOLDIN subunit alpha|Cenarchaeum symbiosum (strain A)

Query: 2 LYQIQLLK 9
LYQ+Q+L+
Sbjct: 10 LYQLQMLE 17




64|Sequence|316|325|QLLKDLRHTE

>sp|GCSH_AERPE|PROBABLE glycine cleavage system H|Aeropyrum pernix (strain ATCC 700893

Query: 2 LLKDLRHTE 10
L KDLR+TE
Sbjct: 17 LRKDLRYTE 25


>sp|HTPX2_SULTO|PROTEASE HtpX homolog 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QLLKDLRHTE 10
QLL+ L HT+
Sbjct: 316 QLLEKLTHTQ 325


>sp|CSA1_SACS2|CRISPR-ASSOCIATED exonuclease Csa1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LLKDLRHTE 10
LLKDLR E
Sbjct: 116 LLKDLREEE 124


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 QLLKDLRHTE 10
Q+L DL HT+
Sbjct: 846 QILHDLLHTD 855


>sp|TRPC_PYRAR|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LLKDLRH 8
L+K+LRH
Sbjct: 234 LIKELRH 240


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LKDLRHT 9
LKDL HT
Sbjct: 453 LKDLGHT 459




65|Sequence|321|330|LRHTENEEDK

>sp|PRIL_SACS2|DNA primase large subunit PriL|Saccharolobus solfataricus (strain ATCC

Query: 1 LRHTENEED 9
L HTENEE+
Sbjct: 97 LLHTENEEN 105


>sp|HEMH_THEVO|FERROCHELATASE volcanium (strain ATCC 51530

Query: 1 LRHTENEED 9
L H ENEED
Sbjct: 171 LPHPENEED 179


>sp|Y1985_PYRAR|UPF0201 protein Pars_1985|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LRHTENEE 8
+RHTEN++
Sbjct: 9 VRHTENKQ 16


>sp|TRPF_METB6|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanoregula boonei (strain DSM 21154

Query: 3 HTENEED 9
HTE+E D
Sbjct: 61 HTESESD 67


>sp|HIS6_META3|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus aeolicus (strain

Query: 2 RHTENEED 9
RH NEED
Sbjct: 133 RHYVNEED 140


>sp|PELO_SULAC|PROTEIN pelota homolog|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 HTENEED 9
H ENE+D
Sbjct: 16 HVENEDD 22




66|Sequence|326|335|NEEDKVSSSS

***** No hits found ******


67|Sequence|331|340|VSSSSFRQRM

>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 2 SSSSFRQR 9
SSSS+R+R
Sbjct: 418 SSSSYRER 425




68|Sequence|336|345|FRQRMLGNLL

>sp|MFNA_METMA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina mazei (strain

Query: 4 RMLGNLL 10
RMLGNLL
Sbjct: 70 RMLGNLL 76


>sp|NADM_METMJ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 RQRMLG 7
RQRMLG
Sbjct: 131 RQRMLG 136


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 1 FRQRMLGNL 9
F+Q++LG+L
Sbjct: 651 FKQKLLGSL 659


>sp|UPPP_METTP|UNDECAPRENYL-DIPHOSPHATASE thermoacetophila (strain DSM 6194

Query: 1 FRQRMLGNL 9
FR R+LG L
Sbjct: 61 FRSRLLGML 69




69|Sequence|341|350|LGNLLRPPYE

>sp|SDX_SULTO|SULREDOXIN tokodaii (strain DSM 16993

Query: 2 GNLLRPPY 9
G +L PPY
Sbjct: 74 GQMLEPPY 81


>sp|SDX_SACS2|PROBABLE sulredoxin|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GNLLRPPY 9
G +L PPY
Sbjct: 74 GKMLEPPY 81


>sp|DAPAL_PYRHO|UNCHARACTERIZED DapA-like lyase PH0847|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LLRPPY 9
+LRPPY
Sbjct: 266 ILRPPY 271


>sp|Y700_METJA|UNCHARACTERIZED MscS family protein MJ0700|Methanocaldococcus jannaschii (strain

Query: 1 LGNLLRPPYE 10
+GNL+R YE
Sbjct: 233 IGNLMRELYE 242


>sp|DAPAL_PYRFU|UNCHARACTERIZED DapA-like lyase PF0657|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LLRPPY 9
+LRPPY
Sbjct: 267 VLRPPY 272


>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 1 LGNLLRPPY 9
LGN L PY
Sbjct: 345 LGNFLLSPY 353


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 LRPPYE 10
LRPP+E
Sbjct: 49 LRPPWE 54


>sp|DAPAL_THEON|UNCHARACTERIZED DapA-like lyase TON_0506|Thermococcus onnurineus (strain NA1)

Query: 4 LLRPPY 9
+LRPPY
Sbjct: 268 VLRPPY 273


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 5 LRPPYE 10
LRPP+E
Sbjct: 49 LRPPWE 54


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 LRPPYE 10
LRPP+E
Sbjct: 49 LRPPWE 54


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LGNLLRP 7
LGN++RP
Sbjct: 630 LGNIIRP 636


>sp|FMDC_METWO|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 2 GNLLRPPY 9
N+L PPY
Sbjct: 354 ANVLTPPY 361


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LGNLLRP 7
LGN++RP
Sbjct: 630 LGNIIRP 636


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 LRPPYE 10
LRPP+E
Sbjct: 49 LRPPWE 54


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LGNLLRP 7
LGN++RP
Sbjct: 630 LGNIIRP 636


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LGNLLRP 7
LGN++RP
Sbjct: 630 LGNIIRP 636


>sp|FMDC_METTM|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 2 GNLLRPPY 9
N+L PPY
Sbjct: 354 ANVLTPPY 361


>sp|DAPAL_THEKO|UNCHARACTERIZED DapA-like lyase TK1237|Thermococcus kodakarensis (strain ATCC

Query: 4 LLRPPY 9
+LRPPY
Sbjct: 268 VLRPPY 273


>sp|FMDC_METTH|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 2 GNLLRPPY 9
N+L PPY
Sbjct: 354 ANVLTPPY 361


>sp|FAU1_SACS2|PROBABLE ribonuclease FAU-1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GNLLRPPYE 10
G +++PPY+
Sbjct: 112 GIVIKPPYD 120


>sp|FAU1_SACI6|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GNLLRPPYE 10
G +++PPY+
Sbjct: 112 GIVIKPPYD 120


>sp|FAU1_SACI4|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GNLLRPPYE 10
G +++PPY+
Sbjct: 112 GIVIKPPYD 120


>sp|FAU1_SACI3|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.27)

Query: 2 GNLLRPPYE 10
G +++PPY+
Sbjct: 112 GIVIKPPYD 120


>sp|FAU1_SACI2|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GNLLRPPYE 10
G +++PPY+
Sbjct: 112 GIVIKPPYD 120


>sp|FAU1_SACI7|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 GNLLRPPYE 10
G +++PPY+
Sbjct: 112 GIVIKPPYD 120


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LGNLLRPPY 9
LGNL+R Y
Sbjct: 380 LGNLIREEY 388


>sp|RPO1C_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma acidophilum (strain ATCC

Query: 1 LGNLLRPPYE 10
+GN L PYE
Sbjct: 172 IGNELIDPYE 181


>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 2 GNLLRPP 8
G+L+RPP
Sbjct: 131 GSLVRPP 137


>sp|RNP4_THEKO|RIBONUCLEASE P protein component 4|Thermococcus kodakarensis (strain ATCC

Query: 2 GNLLRPPY 9
GN++R PY
Sbjct: 100 GNIMRYPY 107




70|Sequence|346|355|RPPYERPELP

>sp|ACDA2_PYRFU|ACETATE--COA ligase [ADP-forming] II subunit|Pyrococcus furiosus (strain ATCC

Query: 2 PPYERPE 8
P YERPE
Sbjct: 429 PTYERPE 435


>sp|AGLB1_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PYERPE 8
PYE+PE
Sbjct: 454 PYEKPE 459


>sp|GFCR_METS3|TRANSCRIPTIONAL regulator GfcR|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 RPPYERPELP 10
+P E+PE P
Sbjct: 40 KPAEEKPEAP 49


>sp|FWDC_METWO|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 3 PYERPELP 10
P E+PE+P
Sbjct: 8 PKEQPEVP 15


>sp|FWDC_METTM|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 3 PYERPELP 10
P E+PE+P
Sbjct: 8 PKEQPEVP 15


>sp|FWDC_METTH|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 3 PYERPELP 10
P E+PE+P
Sbjct: 8 PKEQPEVP 15


>sp|CDC6_METB6|ORC1-TYPE DNA replication protein|Methanoregula boonei (strain DSM 21154

Query: 2 PPYERPEL 9
PPY P+L
Sbjct: 224 PPYNAPQL 231


>sp|OFOA_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Saccharolobus solfataricus (Sulfolobus

Query: 1 RPPYERPELP 10
+P Y PELP
Sbjct: 216 QPMYNLPELP 225


>sp|CDC6_METHJ|ORC1-TYPE DNA replication protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PPYERPEL 9
PPY P+L
Sbjct: 224 PPYNAPQL 231


>sp|CDC6_METMJ|ORC1-TYPE DNA replication protein|Methanoculleus marisnigri (strain ATCC

Query: 2 PPYERPEL 9
PPY P+L
Sbjct: 224 PPYNAPQL 231


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 2 PPYERPEL 9
PPY+R ++
Sbjct: 52 PPYDRAKM 59


>sp|GGGPS_METS5|GERANYLGERANYLGLYCERYL phosphate synthase|Metallosphaera sedula (strain ATCC 51363

Query: 3 PYERPEL 9
PY+ PEL
Sbjct: 152 PYDNPEL 158


>sp|TRUB_PYRHO|PROBABLE tRNA pseudouridine synthase B|Pyrococcus horikoshii (strain ATCC

Query: 2 PPYERP 7
PPYERP
Sbjct: 34 PPYERP 39


>sp|MAAL_HALMA|METHYLASPARTATE ammonia-lyase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PPYERPEL 9
PPY+R E+
Sbjct: 250 PPYDRTEV 257


>sp|DAPF_METTP|DIAMINOPIMELATE epimerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PPYERPELP 10
P +ER E+P
Sbjct: 127 PRFERSEIP 135


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 1 RPPYERPEL 9
R +ERPEL
Sbjct: 351 RSIFERPEL 359


>sp|KDGA_SULTO|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PPYERPELP 10
PP+ P LP
Sbjct: 99 PPFYFPRLP 107


>sp|RL3_THEKO|LARGE ribosomal subunit protein uL3|Thermococcus kodakarensis (strain

Query: 1 RPPYERPEL 9
+PP ERP++
Sbjct: 329 KPPVERPQI 337


>sp|RL3_THEON|LARGE ribosomal subunit protein uL3|Thermococcus onnurineus (strain NA1)

Query: 1 RPPYERPEL 9
+PP ERP++
Sbjct: 330 KPPVERPQI 338


>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 3 PYERPE 8
PY++PE
Sbjct: 347 PYDKPE 352


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 3 PYERPE 8
PY++PE
Sbjct: 347 PYDKPE 352


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 PYERPE 8
PY++PE
Sbjct: 347 PYDKPE 352


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 3 PYERPE 8
PY++PE
Sbjct: 347 PYDKPE 352


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 3 PYERPE 8
PY++PE
Sbjct: 347 PYDKPE 352


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 3 PYERPE 8
PY++PE
Sbjct: 347 PYDKPE 352


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 PYERPE 8
PY++PE
Sbjct: 347 PYDKPE 352


>sp|GGGPS_AERPE|GERANYLGERANYLGLYCERYL phosphate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PYERPE 8
PYE+PE
Sbjct: 151 PYEKPE 156


>sp|Y911_METJA|MAGNESIUM-CHELATASE subunit ChlI homolog|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RPPYERPEL 9
R P+E P+L
Sbjct: 320 RKPFEPPQL 328


>sp|RNP2_METPE|RIBONUCLEASE P protein component 2|Methanosphaerula palustris (strain ATCC

Query: 1 RPPYERPE 8
R P ERPE
Sbjct: 109 RQPVERPE 116




71|Sequence|351|360|RPELPTCLYV

>sp|SECD_THEGJ|PROTEIN-EXPORT membrane protein SecD|Thermococcus gammatolerans (strain DSM 15229

Query: 3 ELPTCLYV 10
E PTC YV
Sbjct: 147 ECPTCWYV 154


>sp|ARTA_NATPD|ARCHAEOSORTASE A|Natronomonas pharaonis (strain ATCC 35678

Query: 4 LPTCLYV 10
+P CLYV
Sbjct: 81 VPACLYV 87


>sp|Y047_METJA|PROBABLE RNase MJ4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RPELPTCLY 9
+P L C+Y
Sbjct: 362 KPNLEVCMY 370


>sp|PORA_METBF|PYRUVATE synthase subunit PorA|Methanosarcina barkeri (strain Fusaro /

Query: 3 ELPTCLYV 10
E+P C YV
Sbjct: 54 EIPNCEYV 61




72|Sequence|356|365|TCLYVIGLTG

>sp|PORA_METJA|PYRUVATE synthase subunit PorA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CLYVIGLTG 10
C Y++GL G
Sbjct: 351 CNYIVGLGG 359


>sp|CCA_PICTO|CCA-ADDING enzyme|Picrophilus torridus (strain ATCC 700027

Query: 1 TCLYVIGL 8
TC+Y+I L
Sbjct: 270 TCIYIITL 277


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 4 YVIGLTG 10
Y++G+TG
Sbjct: 46 YIVGITG 52


>sp|COFH_METTH|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanothermobacter

Query: 3 LYVIGLTG 10
LY++G+TG
Sbjct: 25 LYLMGVTG 32


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 YVIGLTG 10
+V+GLTG
Sbjct: 47 HVVGLTG 53


>sp|Y209_PYRHO|UPF0146 protein PH0209|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LYVIGLTG 10
LY++ LTG
Sbjct: 102 LYIVPLTG 109


>sp|TRPD_PICTO|ANTHRANILATE phosphoribosyltransferase|Picrophilus torridus (strain ATCC

Query: 1 TCLYVIGLT 9
T LYV G+T
Sbjct: 38 TALYVKGIT 46




73|Sequence|361|370|IGLTGISGSG

>sp|Y592_METVS|UPF0200 protein Mevan_0592|Methanococcus vannielii (strain ATCC 35089

Query: 1 IGLTGISGSG 10
IG+TG+ GSG
Sbjct: 4 IGITGMPGSG 13


>sp|Y527_METM7|UPF0200 protein MmarC7_0527|Methanococcus maripaludis (strain C7 /

Query: 1 IGLTGISGSG 10
IG+TG+ GSG
Sbjct: 4 IGITGMPGSG 13


>sp|Y1392_METM6|UPF0200 protein MmarC6_1392|Methanococcus maripaludis (strain C6 /

Query: 1 IGLTGISGSG 10
IG+TG+ GSG
Sbjct: 4 IGITGMPGSG 13


>sp|Y1282_METMP|UPF0200 protein MMP1282|Methanococcus maripaludis (strain DSM 14266

Query: 1 IGLTGISGSG 10
IG+TG+ GSG
Sbjct: 4 IGITGMPGSG 13


>sp|Y311_METM5|UPF0200 protein MmarC5_0311|Methanococcus maripaludis (strain C5 /

Query: 1 IGLTGISGSG 10
IG+TG+ GSG
Sbjct: 4 IGITGMPGSG 13


>sp|KAD6_METMA|PUTATIVE adenylate kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IGLTGISGSG 10
IGLTG G+G
Sbjct: 3 IGLTGTPGTG 12


>sp|KAD6_METBF|PUTATIVE adenylate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IGLTGISGSG 10
IGLTG G+G
Sbjct: 3 IGLTGTPGTG 12


>sp|KAD6_METAC|PUTATIVE adenylate kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IGLTGISGSG 10
IGLTG G+G
Sbjct: 3 IGLTGTPGTG 12


>sp|Y1399_METJA|UPF0200 protein MJ1399|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IGLTGISGSG 10
IG+TG+ G+G
Sbjct: 4 IGITGMPGAG 13


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 IGLTGISGSG 10
I +TGISGSG
Sbjct: 34 IVITGISGSG 43


Query: 3 LTGISGSG 10
+TG+SGSG
Sbjct: 647 VTGVSGSG 654


>sp|Y1841_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus

Query: 1 IGLTGISGSG 10
+GL G +GSG
Sbjct: 37 VGLIGANGSG 46


>sp|Y950_SULTO|UPF0200 protein STK_09500|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IGLTGISGSG 10
I +TG+ GSG
Sbjct: 7 IAITGMPGSG 16


>sp|MFNA_METBU|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcoides burtonii

Query: 1 IGLTGISGS 9
IGL GI+G+
Sbjct: 161 IGLVGIAGT 169


>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 1 IGLTGIS 7
IGLTG+S
Sbjct: 107 IGLTGVS 113


>sp|MFNA_METBF|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina barkeri (strain

Query: 1 IGLTGISGS 9
IGL GI+G+
Sbjct: 175 IGLVGIAGN 183


>sp|ARGC_METAR|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 4 TGISGSG 10
+GISGSG
Sbjct: 172 SGISGSG 178


>sp|CYSC_AERPE|PROBABLE adenylyl-sulfate kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IGLTGISGSG 10
+ LTG+ GSG
Sbjct: 13 VWLTGLPGSG 22


>sp|Y975_PYRAB|UPF0200 protein PYRAB09750|Pyrococcus abyssi (strain GE5 /

Query: 1 IGLTGISGSG 10
I LTG+ GSG
Sbjct: 3 ILLTGMPGSG 12


>sp|Y434_METTH|UPF0200 protein MTH_434|Methanothermobacter thermautotrophicus (strain

Query: 1 IGLTGISGSG 10
IG+TG+ G+G
Sbjct: 6 IGVTGMPGAG 15


>sp|Y1294_PYRFU|UPF0200 protein PF1294|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LTGISGSG 10
LTG+ GSG
Sbjct: 5 LTGMPGSG 12


>sp|MFNA_METMA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina mazei (strain

Query: 1 IGLTGISGS 9
IGL GI+G+
Sbjct: 175 IGLVGIAGN 183


>sp|KAD6_ARCFU|PUTATIVE adenylate kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IGLTGISGSG 10
I LTG G+G
Sbjct: 3 IALTGTPGTG 12


>sp|ARGC_METBF|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina barkeri (strain Fusaro /

Query: 4 TGISGSG 10
TGISG+G
Sbjct: 172 TGISGAG 178


>sp|HTPX_AERPE|PROTEASE HtpX homolog|Aeropyrum pernix (strain ATCC 700893

Query: 2 GLTGISGSG 10
TG+SG+G
Sbjct: 25 AFTGLSGTG 33


>sp|TSGDD_HALVD|GLUCOSE import ATP-binding protein TsgD13|Haloferax volcanii (strain ATCC

Query: 1 IGLTGISGSG 10
+G+ G+SG+G
Sbjct: 316 VGIAGVSGNG 325


>sp|CYSC_PYRAB|PROBABLE adenylyl-sulfate kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 IGLTGISGSG 10
I LTG SG+G
Sbjct: 6 IWLTGPSGAG 15


>sp|ARGC_METJA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 TGISGSG 10
TG+SG+G
Sbjct: 177 TGVSGAG 183


>sp|ARGC_METAC|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 TGISGSG 10
TGISG+G
Sbjct: 171 TGISGAG 177


>sp|ECFA_METAC|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 IGLTGISGSG 10
IG+TG +GSG
Sbjct: 31 IGITGKNGSG 40


>sp|ARGC_METB6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoregula boonei (strain DSM 21154

Query: 4 TGISGSG 10
TG+SG+G
Sbjct: 168 TGVSGAG 174


>sp|MFNA_METAC|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina acetivorans

Query: 1 IGLTGISGS 9
IGL GI+G+
Sbjct: 175 IGLIGIAGN 183


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GLTGISGSG 10
GLTG+S G
Sbjct: 402 GLTGLSEQG 410


>sp|HFLX_THEPD|GTPASE HflX|Thermofilum pendens (strain DSM 2475

Query: 1 IGLTGISGSG 10
+ LTG +G+G
Sbjct: 196 VALTGYTGAG 205


>sp|NTPTH_PYRNV|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 IGLTGISGSG 10
+G+TG+ G G
Sbjct: 11 VGITGMPGVG 20


>sp|Y456_ARCFU|UNCHARACTERIZED protein AF_0456|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GISGSG 10
GISGSG
Sbjct: 51 GISGSG 56


>sp|Y048_ARCFU|UNCHARACTERIZED protein AF_0048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IGLTGISGS 9
+G TG +GS
Sbjct: 327 VGFTGTTGS 335


>sp|ARGC_METMA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 TGISGSG 10
TGISG+G
Sbjct: 175 TGISGAG 181


>sp|MFNA_PYRAB|PROBABLE L-aspartate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 IGLTGISGS 9
IG+ GI+G+
Sbjct: 162 IGIVGIAGT 170


>sp|P5CR_METAC|PYRROLINE-5-CARBOXYLATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GLTGISGSG 10
+TG+SGSG
Sbjct: 168 AVTGLSGSG 176


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IGLTGISGSG 10
+GLTG G G
Sbjct: 49 VGLTGFPGVG 58


>sp|ISF_METTE|IRON-SULFUR flavoprotein|Methanosarcina thermophila

Query: 3 LTGISGS 9
+TGISGS
Sbjct: 3 ITGISGS 9


>sp|MFNA_PYRHO|L-ASPARTATE/L-GLUTAMATE decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IGLTGISGS 9
IG+ GI+G+
Sbjct: 161 IGIVGIAGT 169


>sp|PT1_HALVD|PHOSPHOENOLPYRUVATE-PROTEIN phosphotransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 IGLTGISGSG 10
IG+T +SG G
Sbjct: 9 IGVTPLSGVG 18




74|Sequence|366|375|ISGSGKSSIA

>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 ISGSGKSSIA 10
ISGSGKSS+A
Sbjct: 39 ISGSGKSSLA 48


Query: 1 ISGSGKSSI 9
+SGSGKS++
Sbjct: 650 VSGSGKSTL 658


>sp|KTHY_STAMF|PROBABLE thymidylate kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 ISGSGKSSIA 10
I G+GK+SIA
Sbjct: 14 IDGAGKTSIA 23


>sp|KTHY2_SACS2|PROBABLE thymidylate kinase 2|Saccharolobus solfataricus (strain ATCC

Query: 1 ISGSGKSSIA 10
I GSGKSS A
Sbjct: 11 IDGSGKSSQA 20


>sp|KTHY2_SULTO|PROBABLE thymidylate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ISGSGKSSIA 10
I GSGKSS A
Sbjct: 12 IDGSGKSSQA 21


>sp|RAD50_HALVD|DNA double-strand break repair Rad50|Haloferax volcanii (strain ATCC

Query: 1 ISGSGKSSI 9
++GSGKSS+
Sbjct: 31 VNGSGKSSL 39


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis

Query: 2 SGSGKSSI 9
+GSGKSSI
Sbjct: 32 NGSGKSSI 39


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis

Query: 2 SGSGKSSI 9
+GSGKSSI
Sbjct: 32 NGSGKSSI 39


>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 2 SGSGKSSI 9
+GSGKSSI
Sbjct: 34 NGSGKSSI 41


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain

Query: 1 ISGSGKSSI 9
++GSGKSS+
Sbjct: 31 VNGSGKSSL 39


>sp|RAD50_METAC|DNA double-strand break repair Rad50|Methanosarcina acetivorans

Query: 1 ISGSGKSSI 9
++GSGKSS+
Sbjct: 31 VNGSGKSSL 39


>sp|KAD6_ARCFU|PUTATIVE adenylate kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GSGKSSIA 10
G+GKSS+A
Sbjct: 10 GTGKSSVA 17


>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 1 ISGSGKSSI 9
++GSGKSS+
Sbjct: 31 LNGSGKSSL 39


>sp|KCY_HALMA|CYTIDYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 2 SGSGKSSIA 10
+GSGKS++A
Sbjct: 9 AGSGKSTLA 17


>sp|KCY_NATPD|CYTIDYLATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SGSGKSSIA 10
+GSGKS++A
Sbjct: 9 AGSGKSTVA 17


>sp|HIS7_METTH|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ISGSGKSSI 9
I GSGKSS+
Sbjct: 24 IDGSGKSSV 32


>sp|Y1037_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 SGSGKSSIA 10
+GSGKS++A
Sbjct: 37 NGSGKSTLA 45


>sp|PSTB_PYRAE|PHOSPHATE import ATP-binding protein PstB|Pyrobaculum aerophilum (strain

Query: 2 SGSGKSSI 9
SGSGKS++
Sbjct: 38 SGSGKSTL 45


>sp|PSTB_AERPE|PHOSPHATE import ATP-binding protein PstB|Aeropyrum pernix (strain ATCC

Query: 2 SGSGKSSI 9
SGSGKS++
Sbjct: 40 SGSGKSTL 47


>sp|KCY_SULAC|CYTIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GSGKSSIA 10
GSGKSS+A
Sbjct: 10 GSGKSSVA 17


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 2 SGSGKSSIA 10
+G+GK SIA
Sbjct: 468 TGTGKQSIA 476


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 2 SGSGKSSIA 10
+G+GK SIA
Sbjct: 467 TGTGKQSIA 475


>sp|Y796_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 SGSGKSSI 9
SGSGKS++
Sbjct: 40 SGSGKSTM 47


>sp|KCY_METAR|CYTIDYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 3 GSGKSSIA 10
GSGK+S+A
Sbjct: 10 GSGKTSVA 17


>sp|TOP6B_THEGJ|TYPE 2 DNA topoisomerase 6|Thermococcus gammatolerans (strain DSM 15229

Query: 2 SGSGKSSIA 10
+G+GK SIA
Sbjct: 467 TGTGKQSIA 475


>sp|COBQ_THEAC|PROBABLE cobyric acid synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SGSGKSSIA 10
SGSGK++IA
Sbjct: 9 SGSGKTTIA 17


>sp|Y2030_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 2 SGSGKSSI 9
SGSGKS++
Sbjct: 40 SGSGKSTL 47


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 2 SGSGKSSI 9
+GSGKSS+
Sbjct: 32 NGSGKSSL 39


>sp|RAD50_PYRAB|DNA double-strand break repair Rad50|Pyrococcus abyssi (strain GE5 /

Query: 2 SGSGKSSI 9
+GSGKSS+
Sbjct: 32 NGSGKSSL 39


>sp|Y1136_SULTO|PUTATIVE ABC transporter ATP-binding protein|Sulfurisphaera tokodaii

Query: 2 SGSGKSSI 9
SGSGKS++
Sbjct: 39 SGSGKSTL 46


>sp|RAD50_SULTO|DNA double-strand break repair Rad50|Sulfurisphaera tokodaii (strain

Query: 2 SGSGKSSI 9
+G+GKSSI
Sbjct: 32 NGAGKSSI 39


>sp|RAD50_SULAC|DNA double-strand break repair Rad50|Sulfolobus acidocaldarius

Query: 2 SGSGKSSI 9
+G+GKSSI
Sbjct: 32 NGAGKSSI 39


>sp|RAD50_SACS2|DNA double-strand break repair Rad50|Saccharolobus solfataricus

Query: 2 SGSGKSSI 9
+G+GKSSI
Sbjct: 32 NGAGKSSI 39


>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 2 SGSGKSSI 9
+G+GKSSI
Sbjct: 33 NGAGKSSI 40


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SGSGKSSIA 10
SGSGK+S +
Sbjct: 260 SGSGKTSTS 268


>sp|ECFA_METAC|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 SGSGKSSIA 10
+GSGKS++A
Sbjct: 37 NGSGKSTLA 45


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 SGSGKSSIA 10
SG+GK+++A
Sbjct: 327 SGAGKTTLA 335


>sp|CYSC_ARCFU|PROBABLE adenylyl-sulfate kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SGSGKSSIA 10
SG+GK+++A
Sbjct: 11 SGAGKTTLA 19


>sp|Y1893_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 2 SGSGKSSI 9
SGSGKS++
Sbjct: 40 SGSGKSTL 47


>sp|Y373_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5

Query: 2 SGSGKSS 8
SGSGKS+
Sbjct: 40 SGSGKST 46


>sp|Y1815_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 2 SGSGKSS 8
SGSGKS+
Sbjct: 40 SGSGKST 46


>sp|CYSC_PYRAB|PROBABLE adenylyl-sulfate kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 SGSGKSSIA 10
SG+GK+++A
Sbjct: 12 SGAGKTTLA 20


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SGSGKSSIA 10
SGSGK+S +
Sbjct: 258 SGSGKTSTS 266


>sp|SMC_METJA|CHROMOSOME partition protein Smc|Methanocaldococcus jannaschii (strain ATCC

Query: 2 SGSGKSSI 9
+GSGKS+I
Sbjct: 33 NGSGKSNI 40


>sp|KCY_SACI7|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 GSGKSSIA 10
GSGK+S+A
Sbjct: 10 GSGKTSVA 17


>sp|KCY_SACI1|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 GSGKSSIA 10
GSGK+S+A
Sbjct: 10 GSGKTSVA 17


>sp|KCY_SACS2|CYTIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GSGKSSIA 10
GSGK+S+A
Sbjct: 10 GSGKTSVA 17


>sp|KCY_SACI6|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 GSGKSSIA 10
GSGK+S+A
Sbjct: 10 GSGKTSVA 17


>sp|KCY_SACI4|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GSGKSSIA 10
GSGK+S+A
Sbjct: 10 GSGKTSVA 17


>sp|KCY_SACI3|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 GSGKSSIA 10
GSGK+S+A
Sbjct: 10 GSGKTSVA 17


>sp|KCY_SACI2|CYTIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 GSGKSSIA 10
GSGK+S+A
Sbjct: 10 GSGKTSVA 17


>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SGSGKSSIA 10
SGSGK+S +
Sbjct: 258 SGSGKTSTS 266


>sp|HERA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 1 ISGSGKSSIA 10
I+G GKS+ A
Sbjct: 129 ITGGGKSNTA 138


>sp|RAD50_THEVO|DNA double-strand break repair Rad50|Thermoplasma volcanium (strain

Query: 2 SGSGKSSI 9
+G+GKSSI
Sbjct: 32 NGAGKSSI 39


>sp|CDC6I_HALMA|ORC1-TYPE DNA replication protein 9|Haloarcula marismortui (strain ATCC

Query: 2 SGSGKSSIA 10
+GSGKS +A
Sbjct: 77 TGSGKSLVA 85


>sp|RAD50_THEAC|DNA double-strand break repair Rad50|Thermoplasma acidophilum (strain

Query: 2 SGSGKSSI 9
+G+GKSSI
Sbjct: 32 NGAGKSSI 39


>sp|SMC_PYRFU|CHROMOSOME partition protein Smc|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SGSGKSSIA 10
+GSGKS+I
Sbjct: 35 NGSGKSNIG 43


>sp|COBQ_PYRFU|PROBABLE cobyric acid synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ISGSGKSSIA 10
+SG GKS IA
Sbjct: 11 MSGVGKSLIA 20


>sp|PSTB_SACS2|PHOSPHATE import ATP-binding protein PstB|Saccharolobus solfataricus

Query: 2 SGSGKSSI 9
SGSGKS++
Sbjct: 45 SGSGKSTL 52




75|Sequence|371|380|KSSIAQRLKG

>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 SSIAQRLKG 10
SS+ QRL+G
Sbjct: 177 SSVPQRLRG 185


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 3 SIAQRLKG 10
++AQRLKG
Sbjct: 297 TLAQRLKG 304


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 3 SIAQRLKG 10
++AQRLKG
Sbjct: 297 TLAQRLKG 304


>sp|KAD6_ARCFU|PUTATIVE adenylate kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KSSIAQRLK 9
KSS+A+RL+
Sbjct: 13 KSSVAERLR 21


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 3 SIAQRLKG 10
++AQRLKG
Sbjct: 297 TLAQRLKG 304


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 3 SIAQRLKG 10
++AQRLKG
Sbjct: 293 TLAQRLKG 300


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 3 SIAQRLKG 10
++AQRLKG
Sbjct: 293 TLAQRLKG 300


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 3 SIAQRLKG 10
++AQRLKG
Sbjct: 300 TLAQRLKG 307


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 3 SIAQRLKG 10
++AQRLKG
Sbjct: 300 TLAQRLKG 307


>sp|SAHH_SULTO|ADENOSYLHOMOCYSTEINASE tokodaii (strain DSM 16993

Query: 4 IAQRLKG 10
IAQRL+G
Sbjct: 219 IAQRLRG 225




76|Sequence|376|385|QRLKGLGAFV

>sp|SAHH_SULTO|ADENOSYLHOMOCYSTEINASE tokodaii (strain DSM 16993

Query: 1 QRLKGLGAFV 10
QRL+G+GA V
Sbjct: 221 QRLRGMGARV 230


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 2 RLKGLGAFV 10
RLKG+GA V
Sbjct: 217 RLKGMGANV 225


>sp|SAHH_THEAC|ADENOSYLHOMOCYSTEINASE acidophilum (strain ATCC 25905

Query: 2 RLKGLGAFV 10
RLKG+GA V
Sbjct: 217 RLKGMGANV 225


>sp|HEM3_ARCFU|PROBABLE porphobilinogen deaminase|Archaeoglobus fulgidus (strain ATCC

Query: 3 LKGLGAFV 10
KG+GAFV
Sbjct: 50 FKGMGAFV 57


>sp|SAHH_SACS2|ADENOSYLHOMOCYSTEINASE solfataricus (strain ATCC 35092

Query: 2 RLKGLGAFV 10
RL+G+GA V
Sbjct: 224 RLRGMGARV 232


>sp|HIS52_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 2 RLKGLG 7
RLKGLG
Sbjct: 94 RLKGLG 99


>sp|THPR_AERPE|RNA 2',3'-cyclic phosphodiesterase|Aeropyrum pernix (strain ATCC

Query: 3 LKGLGAF 9
L+GLGAF
Sbjct: 61 LRGLGAF 67


>sp|HEM3_METAR|PROBABLE porphobilinogen deaminase|Methanocella arvoryzae (strain DSM

Query: 3 LKGLGAFV 10
+KG GAFV
Sbjct: 49 MKGYGAFV 56


>sp|TBP_PYRHO|TATA-BOX-BINDING protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QRLKGLG 7
Q+LKG+G
Sbjct: 85 QKLKGIG 91


>sp|CCA_HALLT|CCA-ADDING enzyme|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 LKGLGAF 9
LKG+GA+
Sbjct: 163 LKGIGAY 169


>sp|HIS5_METBF|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina barkeri

Query: 3 LKGLGAFV 10
L G+GAFV
Sbjct: 45 LPGVGAFV 52


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 3 LKGLGAFV 10
+ GLGAF+
Sbjct: 651 MNGLGAFI 658


>sp|BIOB_CENSY|BIOTIN synthase|Cenarchaeum symbiosum (strain A)

Query: 2 RLKGLG 7
RLKGLG
Sbjct: 150 RLKGLG 155




77|Sequence|381|390|LGAFVIDSDH

>sp|APGM_AERPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Aeropyrum pernix (strain ATCC 700893

Query: 3 AFVIDSDH 10
AFV+ SDH
Sbjct: 358 AFVVTSDH 365


>sp|THS_METKA|THERMOSOME subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 GAFVIDSDH 10
G VID+DH
Sbjct: 193 GEIVIDTDH 201


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 GAFVIDSDH 10
G F I SDH
Sbjct: 371 GMFAIRSDH 379


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 GAFVIDSD 9
G F+ID D
Sbjct: 45 GVFIIDGD 52


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AFVIDSDH 10
AF++DS H
Sbjct: 547 AFLLDSQH 554


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 AFVIDSD 9
A+V+DSD
Sbjct: 325 AYVVDSD 331


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 VIDSDH 10
VIDSDH
Sbjct: 371 VIDSDH 376


>sp|RFHPS_METTH|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanothermobacter thermautotrophicus

Query: 2 GAFVIDSDH 10
G F++D+ H
Sbjct: 148 GGFIVDAGH 156


>sp|Y665_METJA|UNCHARACTERIZED protein MJ0665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FVIDSDH 10
FV+D++H
Sbjct: 111 FVVDNEH 117


>sp|APGM_PYRAE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 FVIDSDH 10
FV+ SDH
Sbjct: 340 FVVTSDH 346


>sp|METXA_HALMA|HOMOSERINE O-acetyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 5 VIDSDH 10
VIDSDH
Sbjct: 345 VIDSDH 350




78|Sequence|386|395|IDSDHLGHRA

>sp|Y1761_METMA|MEMO1 family protein MM_1761|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IDSDHLGHR 9
+D+D LGH+
Sbjct: 111 VDADELGHK 119


>sp|COAD_THEGJ|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DSDHLGHRA 10
D HLGH+A
Sbjct: 15 DRLHLGHKA 23


>sp|COAD_PYRHO|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DSDHLGHRA 10
D HLGH+A
Sbjct: 14 DRLHLGHKA 22


>sp|COAD_PYRFU|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DSDHLGHRA 10
D HLGH+A
Sbjct: 15 DRLHLGHKA 23


>sp|COAD_PYRAB|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 DSDHLGHRA 10
D HLGH+A
Sbjct: 14 DRLHLGHKA 22


>sp|COAD_THEKO|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 DSDHLGHRA 10
D HLGH+A
Sbjct: 15 DRLHLGHKA 23


>sp|Y601_METAC|MEMO1 family protein MA_0601|Methanosarcina acetivorans (strain ATCC

Query: 1 IDSDHLGH 8
+D+D LGH
Sbjct: 111 VDTDELGH 118


>sp|SYC_METMP|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DSDHLGH 8
D+ HLGH
Sbjct: 34 DNTHLGH 40


>sp|SYC_METM7|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 DSDHLGH 8
D HLGH
Sbjct: 34 DHTHLGH 40


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 DSDHLGH 8
D HLGH
Sbjct: 34 DHTHLGH 40


>sp|PRIS_ARCFU|DNA primase small subunit PriS|Archaeoglobus fulgidus (strain ATCC

Query: 1 IDSDHLGHRA 10
ID+DHL +A
Sbjct: 97 IDADHLPVKA 106


>sp|PRIS_PYRAR|DNA primase small subunit PriS|Pyrobaculum arsenaticum (strain DSM

Query: 1 IDSDHLGHRA 10
ID DHL A
Sbjct: 89 IDGDHLNTEA 98


>sp|GLPR_HALVD|HTH-TYPE transcriptional regulator GlpR|Haloferax volcanii (strain ATCC

Query: 3 SDHLGH 8
SDHLG+
Sbjct: 26 SDHLGY 31




79|Sequence|391|400|LGHRAYAPGG

>sp|HISX_METMA|HISTIDINOL dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 AYAPGG 10
AYAPGG
Sbjct: 128 AYAPGG 133


>sp|HISX_METAC|HISTIDINOL dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 AYAPGG 10
AYAPGG
Sbjct: 128 AYAPGG 133


>sp|HISX_METBF|HISTIDINOL dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 5 AYAPGG 10
AYAPGG
Sbjct: 128 AYAPGG 133


>sp|ASPD_METKA|L-ASPARTATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 GHRAYAPGG 10
GHR + P G
Sbjct: 119 GHRLHVPSG 127


>sp|TRPB2_PYRAB|TRYPTOPHAN synthase beta chain 2|Pyrococcus abyssi (strain GE5 /

Query: 1 LGHRAYAP 8
LGHR Y P
Sbjct: 321 LGHRYYVP 328


>sp|AATD_METJA|A-TYPE ATP synthase subunit D|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LGHRAYAPGG 10
+G R Y+P G
Sbjct: 114 VGERGYSPYG 123


>sp|TOP6A_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 LGHRAYA 7
LGH AYA
Sbjct: 180 LGHGAYA 186


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LGHRAYAP 8
+GH YAP
Sbjct: 214 VGHMRYAP 221


>sp|ENGB_NATPD|PROBABLE GTP-binding protein EngB|Natronomonas pharaonis (strain ATCC

Query: 2 GHRAYAPGG 10
GH ++A GG
Sbjct: 31 GHDSFATGG 39


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LGHRAYAP 8
+GH YAP
Sbjct: 214 VGHMRYAP 221


>sp|FLA1_SACSH|FLAGELLIN FlaB2|Saccharolobus shibatae (strain ATCC 51178

Query: 1 LGHRAYAPG 9
LGH YA G
Sbjct: 138 LGHAVYANG 146


>sp|RL22_THEPD|LARGE ribosomal subunit protein uL22|Thermofilum pendens (strain DSM

Query: 1 LGHRAYAPG 9
+GHR+ PG
Sbjct: 68 VGHRSDVPG 76


>sp|GGR_METAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GHRAYAPGG 10
G R Y+P G
Sbjct: 71 GSRIYSPNG 79


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LGHRAYAP 8
+GH YAP
Sbjct: 213 VGHMRYAP 220


>sp|GGR_METTP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GHRAYAPGG 10
G R YAP G
Sbjct: 69 GARLYAPDG 77


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 AYAPGG 10
AY+PGG
Sbjct: 95 AYSPGG 100


>sp|SYT_PYRAE|THREONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GHRAYAP 8
GH YAP
Sbjct: 214 GHMRYAP 220


>sp|FER_METPR|ZINC-CONTAINING ferredoxin|Metallosphaera prunae

Query: 2 GHRAYAP 8
GH+ YAP
Sbjct: 18 GHKVYAP 24


>sp|HIS5_PICTO|IMIDAZOLE glycerol phosphate synthase subunit|Picrophilus torridus (strain

Query: 3 HRAYAPGG 10
HR YAP G
Sbjct: 132 HRYYAPLG 139


>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 LGHRAYAP 8
LGH Y P
Sbjct: 211 LGHMRYGP 218


>sp|HISX_NATPD|HISTIDINOL dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 6 YAPGG 10
YAPGG
Sbjct: 123 YAPGG 127


>sp|HISX_HALMA|HISTIDINOL dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 6 YAPGG 10
YAPGG
Sbjct: 123 YAPGG 127


>sp|HISX_HALSA|HISTIDINOL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 6 YAPGG 10
YAPGG
Sbjct: 124 YAPGG 128


>sp|AROA_HALS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 GHRAYAPGG 10
G +AYAP G
Sbjct: 221 GGQAYAPSG 229




80|Sequence|396|405|YAPGGPAYQP

>sp|HISX_NATPD|HISTIDINOL dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YAPGGPAYQP 10
YAPGG A P
Sbjct: 123 YAPGGTAAYP 132


>sp|HISX_HALMA|HISTIDINOL dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YAPGGPAYQP 10
YAPGG A P
Sbjct: 123 YAPGGTAAYP 132


>sp|HISX_HALSA|HISTIDINOL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 YAPGGPAYQP 10
YAPGG A P
Sbjct: 124 YAPGGTAAYP 133


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YAPGGPAYQP 10
+APG P Y P
Sbjct: 242 WAPGFPMYTP 251


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 APGGPAYQP 10
PG P Y+P
Sbjct: 260 GPGLPLYEP 268


>sp|PHNC_HALSA|PHOSPHONATES import ATP-binding protein PhnC|Halobacterium salinarum (strain

Query: 2 APGGPAYQP 10
A GGP QP
Sbjct: 265 AAGGPDQQP 273


>sp|Y1053_ARCFU|UNCHARACTERIZED protein AF_1053|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GGPAYQP 10
GG +YQP
Sbjct: 69 GGASYQP 75


>sp|GSA_METS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 APGGPAYQ 9
AP GP YQ
Sbjct: 281 APNGPVYQ 288


>sp|GSA_NITMS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 APGGPAYQ 9
+PGG YQ
Sbjct: 282 SPGGKVYQ 289


>sp|SPEE_PICTO|POLYAMINE aminopropyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 4 GGPAYQP 10
G P YQP
Sbjct: 192 GSPYYQP 198


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YAPGGPAY 8
Y+P GP Y
Sbjct: 353 YSPKGPVY 360


>sp|ARLY_METTP|ARGININOSUCCINATE lyase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PGGPA 7
PGGPA
Sbjct: 436 PGGPA 440


>sp|ARLY_METTH|ARGININOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PGGPA 7
PGGPA
Sbjct: 444 PGGPA 448


>sp|ARLY_METMA|ARGININOSUCCINATE lyase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PGGPA 7
PGGPA
Sbjct: 441 PGGPA 445


>sp|ARLY_METHJ|ARGININOSUCCINATE lyase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PGGPA 7
PGGPA
Sbjct: 443 PGGPA 447


>sp|SPEE1_HYPBU|POLYAMINE aminopropyltransferase 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 YAPGGP 6
Y PGGP
Sbjct: 11 YQPGGP 16


>sp|KADA_SULAC|ADENYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YAPGGPAY 8
Y PG P+Y
Sbjct: 102 YLPGLPSY 109


>sp|GSA_METPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 APGGPAYQ 9
AP GP YQ
Sbjct: 284 APAGPVYQ 291


>sp|GSA_METHJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 APGGPAYQ 9
AP GP YQ
Sbjct: 285 APAGPVYQ 292


>sp|SPEE_THEVO|POLYAMINE aminopropyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GGPAYQP 10
G P YQP
Sbjct: 193 GSPFYQP 199


>sp|GSA_METMJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 APGGPAYQ 9
AP GP YQ
Sbjct: 282 APAGPVYQ 289


>sp|AROA_HALWD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PGGPAYQP 10
PGG +Y P
Sbjct: 220 PGGQSYTP 227


>sp|DTDA_SULAC|D-AMINOACYL-TRNA deacylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 GGPAYQP 10
GGP Y P
Sbjct: 162 GGPHYAP 168


>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 3 PGGPAYQ 9
P GPAY+
Sbjct: 393 PAGPAYR 399


>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 3 PGGPAYQP 10
PGG +Y+P
Sbjct: 308 PGGSSYRP 315


>sp|SPEE_THEAC|POLYAMINE aminopropyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GGPAYQP 10
G P YQP
Sbjct: 193 GSPFYQP 199


>sp|POK_METHJ|PANTOATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 APGGPA 7
+PGGPA
Sbjct: 276 SPGGPA 281


>sp|SYFB_THEPD|PHENYLALANINE--TRNA ligase beta subunit|Thermofilum pendens (strain DSM 2475

Query: 5 GPAYQP 10
GPAY+P
Sbjct: 90 GPAYRP 95


>sp|RS4_AERPE|SMALL ribosomal subunit protein uS4|Aeropyrum pernix (strain ATCC 700893

Query: 1 YAPGGP 6
YAPG P
Sbjct: 155 YAPGSP 160


>sp|IDI2_AERPE|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PGGPAYQP 10
PG AYQP
Sbjct: 158 PGQEAYQP 165


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 APGGPAY 8
AP GP Y
Sbjct: 280 APSGPVY 286


>sp|ULIL_METAC|ULILYSIN acetivorans (strain ATCC 35395

Query: 3 PGGPA 7
PGGPA
Sbjct: 194 PGGPA 198


>sp|GSA_METBF|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina barkeri (strain Fusaro /

Query: 2 APGGPAYQ 9
+P GP YQ
Sbjct: 290 SPSGPVYQ 297


>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 APGGPAY 8
AP GP Y
Sbjct: 280 APSGPVY 286


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 APGGPAYQ 9
PG PA+Q
Sbjct: 1160 VPGTPAFQ 1167


>sp|GSA_METB6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoregula boonei (strain DSM 21154

Query: 2 APGGPAYQ 9
AP GP YQ
Sbjct: 282 APQGPVYQ 289


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 APGGPAY 8
AP GP Y
Sbjct: 280 APSGPVY 286




81|Sequence|401|410|PAYQPVVEAF

>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PAYQPVVEAF 10
P YQ +EAF
Sbjct: 123 PVYQAFIEAF 132


>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PAYQPVVEAF 10
P YQ +E+F
Sbjct: 121 PVYQVFIESF 130


>sp|THIC1_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PAYQPVVEAF 10
P YQ +E+F
Sbjct: 121 PVYQVFIESF 130


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 PAYQPVVEAF 10
P YQ V EA+
Sbjct: 345 PGYQKVGEAY 354


>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PAYQPVVEAF 10
P YQ +E+F
Sbjct: 121 PVYQIFIESF 130


>sp|THIC_SACI4|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PAYQPVVEAF 10
P YQ +E+F
Sbjct: 121 PVYQIFIESF 130


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PAYQPVVEAF 10
P YQ +E+F
Sbjct: 121 PVYQIFIESF 130


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PAYQPVVEAF 10
P YQ +E+F
Sbjct: 121 PVYQIFIESF 130


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PAYQPVVEAF 10
P YQ +E+F
Sbjct: 121 PVYQIFIESF 130


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 PVVEAF 10
PVVEAF
Sbjct: 407 PVVEAF 412


>sp|HDRB1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina acetivorans

Query: 3 YQPVVE 8
YQPV+E
Sbjct: 260 YQPVIE 265


>sp|THRC_METJA|THREONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 QPVVEAF 10
+P+VEAF
Sbjct: 269 KPIVEAF 275


>sp|Y1472_METJA|UNCHARACTERIZED protein MJ1472|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PAYQPVVE 8
P Y+P++E
Sbjct: 535 PGYKPLIE 542


>sp|THIC2_METST|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PAYQPVVEA 9
P YQ VEA
Sbjct: 121 PIYQTAVEA 129


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 AYQPVVEAF 10
+YQP++E+
Sbjct: 333 SYQPIIESL 341


>sp|CAPPA_METS5|PHOSPHOENOLPYRUVATE carboxylase|Metallosphaera sedula (strain ATCC 51363

Query: 2 AYQPVVEAF 10
+YQPV+E+
Sbjct: 332 SYQPVIESL 340


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 PVVEAF 10
PVVEAF
Sbjct: 405 PVVEAF 410


>sp|CAPPA_SACS2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 YQPVVEAF 10
YQP++E+
Sbjct: 334 YQPIIESL 341


>sp|CAPPA_SACI7|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 YQPVVEAF 10
YQP++E+
Sbjct: 334 YQPIIESL 341


>sp|CAPPA_SACI6|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 YQPVVEAF 10
YQP++E+
Sbjct: 334 YQPIIESL 341


>sp|CAPPA_SACI4|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 YQPVVEAF 10
YQP++E+
Sbjct: 334 YQPIIESL 341


>sp|CAPPA_SACI3|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 YQPVVEAF 10
YQP++E+
Sbjct: 334 YQPIIESL 341


>sp|CAPPA_SACI2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 YQPVVEAF 10
YQP++E+
Sbjct: 334 YQPIIESL 341


>sp|Y148_ARCFU|UNCHARACTERIZED protein AF_0148|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PAYQPVVEAF 10
PA+QP+ AF
Sbjct: 30 PAFQPLNLAF 39


>sp|THIC2_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PAYQPVVEAF 10
P Y+ VEAF
Sbjct: 121 PIYEAGVEAF 130


>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 YQPVVEAF 10
++PV EAF
Sbjct: 3 FKPVAEAF 10


>sp|CAPPA_SACI1|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 YQPVVE 8
YQP++E
Sbjct: 334 YQPIIE 339




82|Sequence|406|415|VVEAFGTDIL

>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 1 VVEAFGTDIL 10
V+EA GTDI+
Sbjct: 378 VIEALGTDIV 387


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VVEAFGTDIL 10
VVE FG D+L
Sbjct: 619 VVEEFGADLL 628


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VVEAFGTDIL 10
VVE +G DIL
Sbjct: 548 VVEKYGRDIL 557


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VVEAFGTDIL 10
VV+ FG D+L
Sbjct: 605 VVQKFGVDVL 614


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 1 VVEAFGTDIL 10
V++A GTDI+
Sbjct: 378 VIDALGTDIV 387


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVEAFGTDIL 10
VVE +G D+L
Sbjct: 614 VVEKYGADLL 623


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 VVEAFGTDIL 10
V+E +G D+L
Sbjct: 605 VIEKYGADVL 614


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VVEAFGTDIL 10
V+E +G D+L
Sbjct: 605 VIEKYGADVL 614


>sp|TRMI_METJA|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 2 VEAFGTDI 9
VE FGTD+
Sbjct: 21 VEKFGTDL 28


>sp|APGM2_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanocaldococcus jannaschii (strain

Query: 1 VVEAFGTDI 9
V+EA G DI
Sbjct: 76 VIEALGEDI 84


>sp|Y1268_SULTO|PUTATIVE HTH-type transcriptional regulatory protein|Sulfurisphaera tokodaii

Query: 1 VVEAFGTDIL 10
+VE FG DIL
Sbjct: 166 LVELFGDDIL 175


>sp|SYC_HALMA|CYSTEINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VVEAFGTDIL 10
VE FG D+L
Sbjct: 300 AVEEFGPDVL 309


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 VVEAFGTDIL 10
VVE +G D L
Sbjct: 642 VVEKYGADTL 651


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 VVEAFGTDI 9
V+E FG D+
Sbjct: 127 VIEVFGEDL 135


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 VVEAFGTDI 9
V+E FG D+
Sbjct: 127 VIEVFGEDL 135


>sp|ALF_HALVD|FRUCTOSE-BISPHOSPHATE aldolase class 2|Haloferax volcanii (strain ATCC 29605

Query: 1 VVEAFGTDIL 10
+VEA G+D+L
Sbjct: 134 MVEAAGSDVL 143


>sp|Y1261_METTH|UPF0104 membrane protein MTH_1261|Methanothermobacter thermautotrophicus

Query: 4 AFGTDI 9
AFGTDI
Sbjct: 249 AFGTDI 254


>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 1 VVEAFGTDIL 10
V EAFG D++
Sbjct: 396 VREAFGDDLI 405


>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VVEAFGTDI 9
+ EA+G+DI
Sbjct: 400 ISEAYGSDI 408


>sp|TRPG_METJA|ANTHRANILATE synthase component 2|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VVEAFGTDI 9
+VEAFG ++
Sbjct: 86 IVEAFGGEV 94


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VVEAFGTDIL 10
VVE +G D L
Sbjct: 531 VVEKYGVDAL 540


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VVEAFGTDIL 10
VVE +G D L
Sbjct: 610 VVERYGADTL 619


>sp|PURP_PYRIL|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VEAFGTDI 9
VE FG DI
Sbjct: 199 VEVFGADI 206


>sp|GLNA_ARCFU|GLUTAMINE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VVEAFGTDI 9
V EA+GT+I
Sbjct: 106 VYEAWGTEI 114


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 2 VEAFGTDIL 10
+EA TDIL
Sbjct: 82 IEAINTDIL 90


>sp|PURP_PYRAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum arsenaticum (strain DSM

Query: 2 VEAFGTDI 9
+E FG DI
Sbjct: 201 IEVFGADI 208


>sp|PURP_PYRNV|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum neutrophilum (strain DSM

Query: 2 VEAFGTDI 9
VE FG DI
Sbjct: 210 VEVFGADI 217


>sp|TRPA_SULAC|TRYPTOPHAN synthase alpha chain|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VEAFGTDIL 10
+E FG DIL
Sbjct: 27 IEDFGVDIL 35


>sp|RSMA_NATPD|PROBABLE ribosomal RNA small subunit|Natronomonas pharaonis (strain ATCC

Query: 1 VVEAFGTDIL 10
VVEA G D++
Sbjct: 241 VVEAAGEDLM 250


>sp|TRPD_METPE|ANTHRANILATE phosphoribosyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 VVEAFGTDIL 10
VVE GT+IL
Sbjct: 236 VVEVKGTEIL 245




83|Sequence|411|420|GTDILHKDGI

>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DILHKDGI 10
DIL+KDG+
Sbjct: 341 DILYKDGV 348


>sp|FAU1_IGNH4|PROBABLE ribonuclease FAU-1|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 DILHKDG 9
DI+HKDG
Sbjct: 413 DIIHKDG 419


>sp|SYD_THEAC|ASPARTATE--TRNA(ASP) ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DILHKDGI 10
D+L KDGI
Sbjct: 285 DLLQKDGI 292


>sp|TRM4_METJA|TRNA (cytosine(48)-C(5))-methyltransferase|Methanocaldococcus jannaschii

Query: 1 GTDILHKDG 9
G D+L KDG
Sbjct: 197 GIDLLKKDG 205


>sp|TRPC_THEVO|INDOLE-3-GLYCEROL phosphate synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GTDILHKDG 9
GT IL KDG
Sbjct: 218 GTSILKKDG 226


>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 TDILHKD 8
TDI HKD
Sbjct: 252 TDIAHKD 258


>sp|RS34_SACS2|SMALL ribosomal subunit protein aS34|Saccharolobus solfataricus (strain

Query: 1 GTDILHK 7
GTDIL+K
Sbjct: 31 GTDILYK 37


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 TDILHKD 8
TDI HKD
Sbjct: 247 TDIKHKD 253


>sp|TRM56_THEVO|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma volcanium

Query: 1 GTDILHKDGI 10
G DIL ++GI
Sbjct: 236 GADILRREGI 245


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 TDILHKD 8
TDI HKD
Sbjct: 250 TDIKHKD 256


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TDILHKD 8
TDI HKD
Sbjct: 250 TDIEHKD 256


>sp|RL4_SACS2|LARGE ribosomal subunit protein uL4|Saccharolobus solfataricus (strain

Query: 2 TDILHKDG 9
+DIL KDG
Sbjct: 10 SDILDKDG 17


>sp|COFF_METMP|COENZYME gamma-F420-2:alpha-L-glutamate ligase|Methanococcus maripaludis

Query: 1 GTDILHKDG 9
G DIL KDG
Sbjct: 240 GIDILPKDG 248


>sp|GVPD_HALMT|PROTEIN GvpD|Haloferax mediterranei (strain ATCC 33500

Query: 1 GTDILHKDG 9
G D+L +DG
Sbjct: 52 GLDVLERDG 60


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TDILHKD 8
TDI HKD
Sbjct: 250 TDIEHKD 256


>sp|HEM1_THEAC|GLUTAMYL-TRNA reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DILHKDGI 10
DIL K+GI
Sbjct: 31 DILEKNGI 38


>sp|RL24E_HALMA|LARGE ribosomal subunit protein eL24|Haloarcula marismortui (strain

Query: 1 GTDILHKDG 9
GT +HKDG
Sbjct: 19 GTMFVHKDG 27


>sp|DNLI_METPE|DNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 DILHKDG 9
DIL++DG
Sbjct: 337 DILYRDG 343


>sp|SYE_NANEQ|GLUTAMATE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 TDILHKD 8
TD+ HKD
Sbjct: 231 TDLTHKD 237


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 2 TDILHKDGI 10
TDI+H D +
Sbjct: 224 TDIIHPDDL 232


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 TDILHKD 8
TDI HKD
Sbjct: 250 TDIEHKD 256


>sp|TF2B2_SACS2|TRANSCRIPTION initiation factor IIB 2|Saccharolobus solfataricus (strain ATCC

Query: 3 DILHKDGI 10
D++HK G+
Sbjct: 228 DLMHKQGL 235


>sp|EI2BL_PYRHO|PUTATIVE translation initiation factor eIF-2B|Pyrococcus horikoshii (strain

Query: 1 GTDILHKDG 9
G D++ KDG
Sbjct: 184 GADMITKDG 192


>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DILHKDG 9
D+LHK G
Sbjct: 312 DVLHKPG 318


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 TDILHKDG 9
+ ILHK+G
Sbjct: 433 SQILHKEG 440


>sp|MTNA_PYRHO|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus horikoshii

Query: 4 ILHKDG 9
++HKDG
Sbjct: 186 VMHKDG 191


>sp|MTNA_PYRAB|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus abyssi (strain

Query: 4 ILHKDG 9
++HKDG
Sbjct: 186 VMHKDG 191


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 TDILHKD 8
TDI+HK+
Sbjct: 236 TDIVHKN 242


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 2 TDILHKDG 9
+ ILHK+G
Sbjct: 433 SQILHKEG 440


>sp|TRPC_THEAC|INDOLE-3-GLYCEROL phosphate synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GTDILHKDG 9
GT IL +DG
Sbjct: 218 GTSILKRDG 226


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 GTDILHKDGI 10
G DI+ K+G+
Sbjct: 696 GYDIIDKEGL 705


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TDILHKDGI 10
T+IL+ DGI
Sbjct: 379 TEILYLDGI 387


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 3 DILHKDGI 10
D+L KDG+
Sbjct: 422 DVLIKDGV 429




84|Sequence|416|425|HKDGIINRKV

>sp|PUR5_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KDGIINRKV 10
KDGII+RK+
Sbjct: 5 KDGIIDRKM 13


>sp|Y1556_METJA|UNCHARACTERIZED protein MJ1556|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HKDGIINRK 9
+K GIIN+K
Sbjct: 81 YKKGIINKK 89


>sp|Y1188_METJA|UNCHARACTERIZED protein MJ1188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HKDGIINRK 9
H G++NRK
Sbjct: 200 HISGVVNRK 208


>sp|Y015_METJA|UNCHARACTERIZED protein MJ0015|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KDGIINRKV 10
+DG+IN+++
Sbjct: 41 RDGVINKRL 49


>sp|Y1587_METJA|UNCHARACTERIZED protein MJ1587|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HKDGIIN 7
H+DGI+N
Sbjct: 143 HRDGIVN 149


>sp|DIPPS_ARCFU|BIFUNCTIONAL IPC transferase and DIPP|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DGIINRKV 10
DG I+RK+
Sbjct: 296 DGFISRKI 303


>sp|RS4_METVS|SMALL ribosomal subunit protein uS4|Methanococcus vannielii (strain

Query: 1 HKDGIINRK 9
HK G++N+K
Sbjct: 31 HKYGLVNKK 39


>sp|PUR5_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GIINRKV 10
GIINRK+
Sbjct: 7 GIINRKL 13


>sp|Y727_METJA|UNCHARACTERIZED protein MJ0727|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HKDGIINRK 9
+K+G+IN K
Sbjct: 186 YKEGLINSK 194


>sp|Y1590_CALMQ|MEMO1 family protein Cmaq_1590|Caldivirga maquilingensis (strain ATCC

Query: 2 KDGIINR 8
KDG+IN+
Sbjct: 17 KDGLINQ 23


>sp|MSRA_METM7|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 1 HKDGIINRKV 10
H DG+I+ +V
Sbjct: 23 HVDGVISTEV 32




85|Sequence|421|430|INRKVLGSRV

>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 INRKVLGSRV 10
INR++ G+R+
Sbjct: 64 INREIYGARI 73


>sp|Y394_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 INRKVLGS 8
+NRK++GS
Sbjct: 216 VNRKIIGS 223


>sp|GVPN2_HALSA|GAS vesicle ATPase GvpN2|Halobacterium salinarum (strain ATCC 700922

Query: 2 NRKVLGSRV 10
NRKV GS++
Sbjct: 7 NRKVRGSKI 15




86|Sequence|426|435|LGSRVFGNKK

>sp|COBQ_METM7|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C7 /

Query: 2 GSRVFGNKK 10
G RVFGN K
Sbjct: 242 GKRVFGNLK 250


>sp|COBQ_METM6|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C6 /

Query: 2 GSRVFGNKK 10
G RVFGN K
Sbjct: 242 GKRVFGNVK 250


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 SRVFGNKK 10
SR+FG+KK
Sbjct: 736 SRLFGHKK 743


>sp|PIP_THEAC|PROLINE iminopeptidase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LGSRVFGNKK 10
L S++FGN+K
Sbjct: 89 LRSKLFGNEK 98


>sp|COBQ_METM5|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C5 /

Query: 2 GSRVFGNKK 10
G RVFGN K
Sbjct: 242 GKRVFGNVK 250


>sp|PURP_SACS2|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Saccharolobus solfataricus (strain

Query: 3 SRVFGNKK 10
+++FGNKK
Sbjct: 88 TKIFGNKK 95


>sp|COBQ_METMP|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GSRVFGNKK 10
G RVFGN K
Sbjct: 242 GKRVFGNLK 250


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 3 SRVFGNKK 10
SR+FG KK
Sbjct: 502 SRLFGGKK 509


>sp|UREG_METS5|UREASE accessory protein UreG|Metallosphaera sedula (strain ATCC 51363

Query: 3 SRVFGNK 9
RVFGNK
Sbjct: 203 ERVFGNK 209


>sp|CDC64_HALSA|ORC1-TYPE DNA replication protein 4|Halobacterium salinarum (strain ATCC

Query: 2 GSRVFGNK 9
G R+F NK
Sbjct: 18 GHRIFANK 25


>sp|CDC62_HALSA|ORC1-TYPE DNA replication protein 2|Halobacterium salinarum (strain ATCC

Query: 2 GSRVFGNK 9
G R+F NK
Sbjct: 18 GHRIFANK 25


>sp|Y1306_METJA|UNCHARACTERIZED protein MJ1306|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGSRVFGNK 9
+G+R+FG K
Sbjct: 73 IGNRLFGGK 81


>sp|CMR6_PYRFU|CRISPR system Cmr subunit Cmr6|Pyrococcus furiosus (strain ATCC 43587

Query: 4 RVFGNKK 10
R+FG KK
Sbjct: 209 RIFGEKK 215


>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 1 LGSRVFGNKK 10
+GSRV+G+ K
Sbjct: 51 VGSRVWGSLK 60


>sp|RS3A_METM7|SMALL ribosomal subunit protein eS1|Methanococcus maripaludis (strain C7

Query: 1 LGSRVFGNKK 10
LGS+++G+ K
Sbjct: 172 LGSKIYGDCK 181




87|Sequence|431|440|FGNKKQLKIL

>sp|Y078_METJA|UNCHARACTERIZED protein MJ0078|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FGNKKQLKIL 10
+GN+++LK+L
Sbjct: 14 YGNREKLKVL 23


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FGNKKQLKI 9
FG K +LKI
Sbjct: 657 FGEKGELKI 665


>sp|RNZ_METJA|RIBONUCLEASE Z|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FGNKKQLKIL 10
FG +K+LKI
Sbjct: 82 FGREKELKIF 91


>sp|SYD_PYRAB|ASPARTATE--TRNA(ASP) ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 NKKQLKIL 10
N+K+LKIL
Sbjct: 262 NEKELKIL 269


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 FGNKKQLKIL 10
FGN+ +KI+
Sbjct: 452 FGNRAVIKII 461


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FGNKKQLKIL 10
FGN+ +KI+
Sbjct: 452 FGNRAVIKII 461


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FGNKKQLKIL 10
FGN+ +KI+
Sbjct: 452 FGNRAVIKII 461




88|Sequence|436|445|QLKILTDIMW

>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 QLKILTDIMW 10
+LK L+DI+W
Sbjct: 560 RLKRLSDIVW 569


>sp|Y142_AERPE|UNCHARACTERIZED HTH-type transcriptional regulator APE_0142|Aeropyrum pernix

Query: 2 LKILTDIMW 10
LKIL++ +W
Sbjct: 84 LKILSNYLW 92


>sp|BACH_NATPH|HALORHODOPSIN pharaonis (Natronobacterium pharaonis)

Query: 2 LKILTDIMW 10
LK+LT +MW
Sbjct: 214 LKLLTVVMW 222


>sp|ILVC_NATPD|KETOL-ACID reductoisomerase (NADP(+))|Natronomonas pharaonis (strain ATCC

Query: 1 QLKILTDIMW 10
+LK++ D+M+
Sbjct: 232 ELKLIVDLMY 241


>sp|ILVC_HALWD|KETOL-ACID reductoisomerase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 1 QLKILTDIMW 10
+LK++ D+M+
Sbjct: 254 ELKLIVDLMY 263


>sp|ILVC_HALMA|KETOL-ACID reductoisomerase (NADP(+))|Haloarcula marismortui (strain ATCC

Query: 1 QLKILTDIMW 10
+LK++ D+M+
Sbjct: 235 ELKLIVDLMY 244




89|Sequence|441|450|TDIMWPIIAK

>sp|GLCD2_CALMQ|GLUCOSE 1-dehydrogenase 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 IMWPIIAK 10
++WP +AK
Sbjct: 325 VVWPTVAK 332


>sp|AGOG_METMP|N-GLYCOSYLASE/DNA lyase|Methanococcus maripaludis (strain DSM 14266

Query: 3 IMWPIIAK 10
I+WP++ +
Sbjct: 221 IIWPVLGR 228


>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 5 WPIIAK 10
WPII K
Sbjct: 51 WPIIEK 56




90|Sequence|446|455|PIIAKLAREE

>sp|FTSZ2_HALVD|CELL division protein FtsZ 2|Haloferax volcanii (strain ATCC 29605

Query: 1 PIIAKLAREE 10
P++AK+A+E+
Sbjct: 135 PVVAKIAKEQ 144


>sp|FTSZ1_HALSA|CELL division protein FtsZ 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 PIIAKLAREE 10
P++AK ARE+
Sbjct: 155 PVVAKAAREQ 164


>sp|FTSZ1_HALS3|CELL division protein FtsZ 1|Halobacterium salinarum (strain ATCC 29341

Query: 1 PIIAKLAREE 10
P++AK ARE+
Sbjct: 155 PVVAKAAREQ 164


>sp|FTSZ_HALMT|CELL division protein FtsZ|Haloferax mediterranei (strain ATCC 33500

Query: 1 PIIAKLARE 9
P++AK ARE
Sbjct: 151 PVVAKAARE 159


>sp|FTSZ2_HALSA|CELL division protein FtsZ 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PIIAKLAREE 10
P+++K+A+E+
Sbjct: 134 PVVSKIAKEQ 143


>sp|FTSZ2_HALS3|CELL division protein FtsZ 2|Halobacterium salinarum (strain ATCC 29341

Query: 1 PIIAKLAREE 10
P+++K+A+E+
Sbjct: 134 PVVSKIAKEQ 143


>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PIIAKLARE 9
P IAK+ARE
Sbjct: 36 PGIAKIARE 44


>sp|FTSZ1_HALVD|CELL division protein FtsZ 1|Haloferax volcanii (strain ATCC 29605

Query: 1 PIIAKLARE 9
P++AK ARE
Sbjct: 153 PVVAKAARE 161


>sp|MVK_THESM|MEVALONATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 PIIAKLARE 9
PI+ K++RE
Sbjct: 316 PIVTKISRE 324


>sp|PYRF_THEAC|OROTIDINE 5'-phosphate decarboxylase|Thermoplasma acidophilum (strain ATCC

Query: 1 PIIAKLAREE 10
IIAK AR++
Sbjct: 70 SIIAKFARDQ 79


>sp|Y1387_METMP|MEMO1 family protein MMP1387|Methanococcus maripaludis (strain DSM 14266

Query: 2 IIAKLARE 9
+IAK+ARE
Sbjct: 177 VIAKVARE 184


>sp|FTSZ_METTH|CELL division protein FtsZ|Methanothermobacter thermautotrophicus

Query: 1 PIIAKLAR 8
P+I+KLA+
Sbjct: 142 PVISKLAK 149


>sp|MVK_THEKO|MEVALONATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PIIAKLARE 9
P+I K++RE
Sbjct: 320 PMITKISRE 328


>sp|FTSZ1_PYRHO|CELL division protein FtsZ 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PIIAKLARE 9
P+IA++AR+
Sbjct: 145 PVIAEMARK 153


>sp|COFC_METBU|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PIIAKLAREE 10
PI++K REE
Sbjct: 18 PILSKKDREE 27


>sp|FTSZ1_PYRFU|CELL division protein FtsZ 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PIIAKLARE 9
P+IA++AR+
Sbjct: 145 PVIAEIARK 153


>sp|HEM3_PYRNV|PROBABLE porphobilinogen deaminase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 IIAKLAREE 10
I+A +AREE
Sbjct: 199 IVAAVAREE 207


>sp|FTSZ1_PYRWO|CELL division protein FtsZ 1|Pyrococcus woesei

Query: 1 PIIAKLARE 9
P+IA++AR+
Sbjct: 139 PVIAEIARK 147




91|Sequence|451|460|LAREEMDRAV

>sp|NPD_PYRAB|NAD-DEPENDENT protein deacylase|Pyrococcus abyssi (strain GE5 /

Query: 1 LAREEMDRA 9
L REE+DRA
Sbjct: 168 LPREELDRA 176


>sp|SYW_THEON|TRYPTOPHAN--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 LAREEMDRAV 10
LARE+ D+AV
Sbjct: 369 LAREQWDKAV 378


>sp|SYW_THESM|TRYPTOPHAN--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 LAREEMDRAV 10
LARE+ D+A+
Sbjct: 369 LAREQWDKAI 378


>sp|METK_PYRCJ|S-ADENOSYLMETHIONINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LAREEMDR 8
+A+EEMDR
Sbjct: 379 IAKEEMDR 386


>sp|Y1056_AERPE|PROTEIN APE_1056.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 LAREEMDR 8
L+REE+DR
Sbjct: 108 LSREELDR 115


>sp|UPPS_AERPE|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Aeropyrum pernix

Query: 1 LAREEMDRAV 10
RE++DRAV
Sbjct: 198 FTREDLDRAV 207


>sp|AATE_METMJ|A-TYPE ATP synthase subunit E|Methanoculleus marisnigri (strain ATCC

Query: 2 AREEMDRAV 10
A+EE DRAV
Sbjct: 47 AQEEADRAV 55


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 AREEMDR 8
AREE+DR
Sbjct: 4 AREELDR 10


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 2 AREEMDRAV 10
AREE+D+ V
Sbjct: 407 AREEVDKLV 415


>sp|TFE_HALSA|TRANSCRIPTION factor E|Halobacterium salinarum (strain ATCC 700922

Query: 3 REEMDR 8
REEMDR
Sbjct: 94 REEMDR 99




92|Sequence|456|465|MDRAVAEGKR

>sp|HEM11_PYRCJ|GLUTAMYL-TRNA reductase 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 MDRAVAEGKR 10
++RAVA GKR
Sbjct: 126 VERAVAVGKR 135


>sp|DPHB_METMA|DIPHTHINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MDRAVAEG 8
MDRAVA G
Sbjct: 199 MDRAVAVG 206


>sp|Y1319_METJA|UNCHARACTERIZED sodium-dependent transporter MJ1319|Methanocaldococcus jannaschii

Query: 1 MDRAVAEG 8
+D+AV+EG
Sbjct: 291 LDKAVSEG 298


>sp|ILVC_PYRAR|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum arsenaticum (strain DSM

Query: 2 DRAVAEGKR 10
D+AVAEG R
Sbjct: 55 DQAVAEGFR 63


>sp|SERA_METTH|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 DRAVAEGK 9
DR+V EGK
Sbjct: 121 DRSVKEGK 128


>sp|SYC_ARCFU|CYSTEINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MDRAVAEGK 9
++RAV EGK
Sbjct: 75 INRAVKEGK 83


>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DRAVAEGK 9
DR+V EGK
Sbjct: 119 DRSVKEGK 126


>sp|PANE_HALSA|2-DEHYDROPANTOATE 2-reductase|Halobacterium salinarum (strain ATCC 700922

Query: 1 MDRAVAEGKR 10
++RAV EG R
Sbjct: 216 LERAVTEGVR 225


>sp|PELO_NATPD|PROTEIN pelota homolog|Natronomonas pharaonis (strain ATCC 35678

Query: 1 MDRAVAEGKR 10
+DR AEG+R
Sbjct: 4 VDRESAEGRR 13


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 1 MDRAVAEGK 9
MDR AEG
Sbjct: 387 MDRLTAEGH 395




93|Sequence|461|470|AEGKRVCVID

>sp|GFCR_THEAC|TRANSCRIPTIONAL regulator GfcR|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EGKRVCVID 10
EGKRV +ID
Sbjct: 135 EGKRVVIID 143


>sp|Y1253_SACS2|PUTATIVE esterase SSO1253|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AEGKRVCVID 10
+EGKR+ V+D
Sbjct: 109 SEGKRLVVVD 118


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 2 EGKRVCVID 10
+GKR+C+ D
Sbjct: 89 KGKRICIKD 97


>sp|GFCR_THEVO|TRANSCRIPTIONAL regulator GfcR|Thermoplasma volcanium (strain ATCC 51530

Query: 2 EGKRVCVID 10
EGKR+ +ID
Sbjct: 135 EGKRIVIID 143


>sp|PYRG_HALHT|CTP synthase|Haloarcula hispanica (strain ATCC 33960

Query: 1 AEGKRVCVID 10
AEG VC+I+
Sbjct: 143 AEGNDVCIIE 152


>sp|PYRG_HALMA|CTP synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AEGKRVCVID 10
AEG VC+I+
Sbjct: 143 AEGNDVCIIE 152


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GKRVCVI 9
GKR+CVI
Sbjct: 10 GKRICVI 16


>sp|PYRG_NATPD|CTP synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AEGKRVCVID 10
AEG VC+I+
Sbjct: 142 AEGHDVCIIE 151


>sp|PYRE_HYPBU|OROTATE phosphoribosyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 EGKRVCVID 10
EG+RV V+D
Sbjct: 110 EGRRVLVVD 118


>sp|Y333_METJA|UNCHARACTERIZED protein MJ0333|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AEGKRVCVID 10
A GKR+ +ID
Sbjct: 85 ASGKRLVIID 94


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 2 EGKRVCVID 10
EGKR+ +ID
Sbjct: 351 EGKRIVLID 359


>sp|ARGC_METB6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoregula boonei (strain DSM 21154

Query: 1 AEGKRVCVI 9
+EGKRV V+
Sbjct: 283 SEGKRVVVV 291


>sp|GFCR_METS3|TRANSCRIPTIONAL regulator GfcR|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 EGKRVCVID 10
EGK+V ++D
Sbjct: 141 EGKKVVIVD 149


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AEGKRVCV 8
A GKRVC+
Sbjct: 130 APGKRVCL 137


>sp|ACYP_METBU|ACYLPHOSPHATASE burtonii (strain DSM 6242

Query: 1 AEGKRVCV 8
A+GKR C+
Sbjct: 52 AQGKRSCI 59


>sp|DDH_HALMT|D-2-HYDROXYACID dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 3 GKRVCVI 9
G+RVCV+
Sbjct: 135 GERVCVV 141


>sp|PYRG_HALSA|CTP synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 AEGKRVCVID 10
AEG VC+++
Sbjct: 141 AEGSDVCLVE 150


>sp|PYRG_HALS3|CTP synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 AEGKRVCVID 10
AEG VC+++
Sbjct: 141 AEGSDVCLVE 150


>sp|PPAC_ARCFU|PROBABLE manganese-dependent inorganic pyrophosphatase|Archaeoglobus

Query: 2 EGKRVCVID 10
EGK+V ++D
Sbjct: 78 EGKKVALVD 86


>sp|DHQS_NITMS|3-DEHYDROQUINATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 AEGKRVCV 8
+G+RVCV
Sbjct: 186 GDGERVCV 193


>sp|HPRT_METZD|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 1 AEGKRVCVID 10
+EG RV ++D
Sbjct: 112 SEGDRVLIVD 121


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 1 AEGKRVCVI 9
A+GKRV +I
Sbjct: 173 AQGKRVTMI 181


>sp|ILVC_ARCFU|KETOL-ACID reductoisomerase (NAD(P)(+))|Archaeoglobus fulgidus (strain ATCC

Query: 2 EGKRVCVI 9
+GK VC+I
Sbjct: 16 DGKTVCII 23


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 2 EGKRVCVID 10
EGK+V ++D
Sbjct: 524 EGKKVWIVD 532


>sp|DHQS_CENSY|3-DEHYDROQUINATE synthase|Cenarchaeum symbiosum (strain A)

Query: 1 AEGKRVCV 8
+G+RVCV
Sbjct: 171 GDGERVCV 178


>sp|DCDA_THEAC|DIAMINOPIMELATE decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 AEGKRVCVID 10
+EG R+ V+D
Sbjct: 347 SEGDRIMVLD 356


>sp|COFD_NATPD|2-PHOSPHO-L-LACTATE transferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AEGKRVC 7
A+G+RVC
Sbjct: 313 ADGERVC 319


>sp|OTC_METS3|ORNITHINE carbamoyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 EGKRVCVI 9
EGK++C +
Sbjct: 144 EGKKLCFV 151


>sp|PYRE_SULAC|OROTATE phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 EGKRVCVID 10
+GK+V V+D
Sbjct: 104 DGKKVIVVD 112


>sp|ASD_METBU|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanococcoides

Query: 2 EGKRVCVI 9
G+RVCV
Sbjct: 76 SGRRVCVF 83




94|Sequence|466|475|VCVIDAAVLL

>sp|RADB_METS3|DNA repair and recombination protein|Methanobrevibacter smithii (strain

Query: 1 VCVIDAAVLL 10
+CV+D+AV L
Sbjct: 121 LCVLDSAVAL 130


>sp|MPTD_METKA|DIHYDRONEOPTERIN aldolase|Methanopyrus kandleri (strain AV19 /

Query: 2 CVIDAAV 8
CVIDA V
Sbjct: 54 CVIDARV 60




95|Sequence|471|480|AAVLLEAGWQ

>sp|ENDA_PYRFU|TRNA-SPLICING endonuclease|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AAVLLEAGW 9
AA LLE GW
Sbjct: 46 AAYLLEKGW 54


>sp|Y931_METLZ|UPF0212 protein Mlab_0931|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 VLLEAGW 9
V LEAGW
Sbjct: 6 VTLEAGW 12


>sp|NAH1_METJA|NA(+)/H(+) antiporter 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AVLLEAGW 9
+V+LEA W
Sbjct: 397 SVILEASW 404




96|Sequence|476|485|EAGWQNLVHE

>sp|AATB_METMA|A-TYPE ATP synthase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EAGWQNLVH 9
E GWQ L H
Sbjct: 427 EIGWQILTH 435


>sp|AATB_METAC|A-TYPE ATP synthase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 1 EAGWQNLVH 9
E GWQ L H
Sbjct: 427 EIGWQILTH 435


>sp|Y1441_METTH|UPF0285 protein MTH_1441|Methanothermobacter thermautotrophicus (strain

Query: 1 EAGWQNLV 8
E GW+N++
Sbjct: 148 ETGWENMI 155


>sp|PRIS_HALLT|DNA primase small subunit PriS|Halorubrum lacusprofundi (strain ATCC

Query: 1 EAGWQNLVHE 10
E GW VHE
Sbjct: 202 EGGWGARVHE 211


>sp|TF2B_METMZ|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (Methanosarcina

Query: 1 EAGWQNLVHE 10
E G +NLVH+
Sbjct: 43 ECGSRNLVHD 52


>sp|TF2B_METMA|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EAGWQNLVHE 10
E G +NLVH+
Sbjct: 43 ECGSRNLVHD 52


>sp|TF2B_METAC|TRANSCRIPTION initiation factor IIB|Methanosarcina acetivorans (strain ATCC

Query: 1 EAGWQNLVHE 10
E G +NLVH+
Sbjct: 43 ECGSRNLVHD 52


>sp|NADM_AERPE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EAGWQNLVH 9
E+GW++ +H
Sbjct: 141 ESGWEDCLH 149


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EAGWQN 6
EAGW+N
Sbjct: 547 EAGWRN 552


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EAGWQNL 7
EAGW+++
Sbjct: 418 EAGWRDI 424


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 4 WQNLVHE 10
W+ L+HE
Sbjct: 354 WEFLIHE 360


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 4 WQNLVHE 10
W+ L+HE
Sbjct: 354 WEFLIHE 360


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 1 EAGWQNLVH 9
E GW+ +H
Sbjct: 231 EGGWKGRLH 239




97|Sequence|481|490|NLVHEVWTAV

>sp|TRUA_METST|TRNA pseudouridine synthase A|Methanosphaera stadtmanae (strain ATCC

Query: 1 NLVHEVWTA 9
N++ + WTA
Sbjct: 39 NIIEDTWTA 47


>sp|DLHH_SACS2|PUTATIVE carboxymethylenebutenolidase|Saccharolobus solfataricus (strain

Query: 2 LVHEVW 7
++HE+W
Sbjct: 30 VIHEIW 35


>sp|Y1182_METJA|UNCHARACTERIZED protein MJ1182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HEVWT 8
HE+WT
Sbjct: 226 HELWT 230


>sp|BE_THEKO|1,4-ALPHA-GLUCAN branching enzyme TK1436|Thermococcus kodakarensis (strain ATCC

Query: 4 HEVWTA 9
H+VW+A
Sbjct: 267 HQVWSA 272


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LVHEVWTA 9
L HE+W A
Sbjct: 538 LFHEMWPA 545




98|Sequence|486|495|VWTAVIPETE

>sp|MTRC_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanopyrus kandleri (strain AV19 /

Query: 1 VWTAVIPETE 10
VWT ++P+ E
Sbjct: 261 VWTGIVPKGE 270


>sp|NADM_HALLT|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 WTAVIPET 9
W A++PET
Sbjct: 139 WQALVPET 146


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WTAVIPETE 10
WT +PE E
Sbjct: 280 WTIALPEFE 288


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VWTAVIPETE 10
++ A+IPETE
Sbjct: 66 LFPALIPETE 75


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 VWTAVIPETE 10
++ A+IPETE
Sbjct: 65 LFPALIPETE 74


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VWTAVIPETE 10
++ A+IPETE
Sbjct: 65 LFPALIPETE 74


>sp|SYP_PYRFU|PROLINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VWTAVIPETE 10
++ A+IPETE
Sbjct: 65 LFPALIPETE 74


>sp|AATB_PYRFU|A-TYPE ATP synthase subunit B|Pyrococcus furiosus (strain ATCC 43587

Query: 4 AVIPETE 10
A++PETE
Sbjct: 435 AILPETE 441


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 1 VWTAVIPETE 10
VW ++ ETE
Sbjct: 137 VWGKLVSETE 146


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 1 VWTAVIPETE 10
VW ++ ETE
Sbjct: 137 VWGKLVSETE 146


>sp|GGGPS_METHJ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VWTAVIPE 8
VW VIPE
Sbjct: 109 VWEKVIPE 116


>sp|SYP_ARCFU|PROLINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WTAVIPETE 10
+ A+IPETE
Sbjct: 63 FPALIPETE 71


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 TAVIPET 9
TA++PET
Sbjct: 373 TAIMPET 379


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 TAVIPET 9
TA++PET
Sbjct: 373 TAIMPET 379




99|Sequence|491|500|IPETEAVRRI

>sp|RADA_METM7|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 1 IPETEAVRRI 10
+P++EAV RI
Sbjct: 306 LPDSEAVFRI 315


>sp|RADA_METM6|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 1 IPETEAVRRI 10
+P++EAV RI
Sbjct: 306 LPDSEAVFRI 315


>sp|PURA_THEAC|ADENYLOSUCCINATE synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IPETEAVRRI 10
IPE E VR+I
Sbjct: 87 IPEIEIVRKI 96


>sp|RADA_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 IPETEAVRRI 10
+P++EAV RI
Sbjct: 306 LPDSEAVFRI 315


>sp|RADA_METMP|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 1 IPETEAVRRI 10
+P++EAV RI
Sbjct: 306 LPDSEAVFRI 315


>sp|RADA_METM5|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 1 IPETEAVRRI 10
+P++EAV RI
Sbjct: 306 LPDSEAVFRI 315


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 1 IPETEAVRRI 10
+PE EAV RI
Sbjct: 513 LPEGEAVFRI 522


>sp|RADA_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 1 IPETEAVRRI 10
+PE EAV RI
Sbjct: 337 LPEGEAVFRI 346


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 1 IPETEAVRRI 10
+PE EAV RI
Sbjct: 820 LPEGEAVFRI 829


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 2 PETEAVRR 9
P+TEAV++
Sbjct: 34 PQTEAVKK 41


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PETEAVRR 9
P+TEAV++
Sbjct: 27 PQTEAVKK 34


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 2 PETEAVRR 9
P+TEAV++
Sbjct: 34 PQTEAVKK 41


>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 2 PETEAVRRI 10
P TE++RR+
Sbjct: 20 PGTESIRRL 28


>sp|KAD_METTP|ADENYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 IPETEAVRRI 10
+P+ E VRR+
Sbjct: 115 VPDEELVRRL 124


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PETEAVRR 9
P+TEAV++
Sbjct: 30 PQTEAVKK 37


>sp|RL30_HALMA|LARGE ribosomal subunit protein uL30|Haloarcula marismortui (strain

Query: 1 IPETEAVR 8
+PET+A R
Sbjct: 35 VPETDAYR 42




100|Sequence|496|505|AVRRIVERDG

>sp|PURO_NATPD|IMP cyclohydrolase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 RRIVERDG 10
RRIV+RDG
Sbjct: 26 RRIVDRDG 33


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 AVRRIVERDG 10
A+RRI ER+G
Sbjct: 184 ALRRICEREG 193


>sp|RL37A_METJA|LARGE ribosomal subunit protein eL43|Methanocaldococcus jannaschii

Query: 1 AVRRIVERD 9
A+RRIVER
Sbjct: 82 AIRRIVERK 90


>sp|CYSC_AERPE|PROBABLE adenylyl-sulfate kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VRRIVERDG 10
VRRIVE +G
Sbjct: 100 VRRIVEEEG 108


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 1 AVRRIVERDG 10
+VRRI+ER G
Sbjct: 594 SVRRIIERFG 603


>sp|RISB_METKA|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 AVRRIVERD 9
AVR+++ERD
Sbjct: 51 AVRKLLERD 59


>sp|NNRE_NITMS|NAD(P)H-HYDRATE epimerase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 AVRRIVERDG 10
AV+R+VE+ G
Sbjct: 33 AVKRLVEKLG 42


>sp|KCY_AERPE|CYTIDYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VRRIVERDG 10
VRRI RDG
Sbjct: 102 VRRIARRDG 110


>sp|KCY_METBU|CYTIDYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 VRRIVERDG 10
V+RIV+R+G
Sbjct: 104 VKRIVDREG 112


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 1 AVRRIVERDG 10
A IVERDG
Sbjct: 493 AALEIVERDG 502


>sp|Y940_THEON|UPF0248 protein TON_0940|Thermococcus onnurineus (strain NA1)

Query: 2 VRRIVERDG 10
+RR+V++DG
Sbjct: 64 IRRVVKKDG 72


>sp|PUR5_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VRRIVERDG 10
VR+I+E+ G
Sbjct: 192 VRKIIEKSG 200


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 1 AVRRIVERDG 10
AV+RIVE G
Sbjct: 508 AVKRIVEIQG 517


>sp|PURO_HALLT|IMP cyclohydrolase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 RRIVERDG 10
RR+ +RDG
Sbjct: 26 RRVTDRDG 33


>sp|GATA_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanothermobacter thermautotrophicus

Query: 2 VRRIVERDG 10
+RRI E DG
Sbjct: 106 IRRIKEEDG 114


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 1 AVRRIVER 8
A+RRI+ER
Sbjct: 381 ALRRIIER 388


>sp|DPS_PYRFU|DNA protection during starvation protein|Pyrococcus furiosus (strain

Query: 3 RRIVERDG 10
RR+VER G
Sbjct: 6 RRLVERTG 13


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 AVRRIVERDG 10
A+RR+ +R+G
Sbjct: 16 AMRRVADREG 25


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 AVRRIVERDG 10
A+RR+ +R+G
Sbjct: 16 AMRRVADREG 25


>sp|PSB_HALVD|PROTEASOME subunit beta|Haloferax volcanii (strain ATCC 29605

Query: 1 AVRRIVERD 9
A+R VERD
Sbjct: 206 AIRSAVERD 214


>sp|GGGPS_METMA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VRRIVERDG 10
+++I+E+DG
Sbjct: 7 LQKIIEKDG 15


>sp|KCY_METHJ|CYTIDYLATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 VRRIVERD 9
VRRI +RD
Sbjct: 105 VRRIFDRD 112


>sp|KAD_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RRIVERDG 10
RRIVER G
Sbjct: 18 RRIVERYG 25




101|Sequence|501|510|VERDGLSEAA

>sp|NPD_METKA|NAD-DEPENDENT protein deacylase|Methanopyrus kandleri (strain AV19 /

Query: 1 VERDGLSEA 9
+ERDGL EA
Sbjct: 87 MERDGLLEA 95


>sp|PURA2_METAC|ADENYLOSUCCINATE synthetase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VERDGLSEAA 10
+E DGL EAA
Sbjct: 110 IEMDGLREAA 119


>sp|TRPF_ARCFU|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VERDGLSE 8
VERDGL +
Sbjct: 176 VERDGLKD 183


>sp|ATGT_THEVO|TRNA-GUANINE(15) transglycosylase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 ERDGLSEAA 10
ERDGL+ A
Sbjct: 5 ERDGLARIA 13


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ERDGLSEAA 10
ERDGL+ A
Sbjct: 5 ERDGLARIA 13


>sp|MER_ARCFU|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VERDGLSEAA 10
+ER GLSE A
Sbjct: 241 LERHGLSEDA 250




102|Sequence|506|515|LSEAAAQSRL

***** No hits found ******


103|Sequence|511|520|AQSRLQSQMS

***** No hits found ******


104|Sequence|516|525|QSQMSGQQLV

>sp|DHQS_METHJ|3-DEHYDROQUINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 QSQMSGQQL 9
QS +SGQQL
Sbjct: 143 QSGISGQQL 151




105|Sequence|521|530|GQQLVEQSHV

>sp|ARGDC_SULTO|ARGININE decarboxylase proenzyme|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 LVEQSHV 10
LVE+SH+
Sbjct: 72 LVEESHI 78




106|Sequence|526|535|EQSHVVLSTL

>sp|CAPPA_SULAC|PHOSPHOENOLPYRUVATE carboxylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QSHVVLSTL 10
+ HV+LSTL
Sbjct: 475 KKHVLLSTL 483




107|Sequence|531|540|VLSTLWEPHI

>sp|CRTD_HALJT|CAROTENOID 3,4-desaturase|Haloarcula japonica (strain ATCC 49778

Query: 1 VLSTLWEPH 9
VL T W+PH
Sbjct: 332 VLPTDWDPH 340


>sp|RPO10_METLZ|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanocorpusculum labreanum (strain

Query: 1 VLSTLWEPH 9
V+ST+WE +
Sbjct: 12 VISTVWEEY 20


>sp|AROA_SACS2|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 LSTLWEP 8
++ LWEP
Sbjct: 243 ITNLWEP 249


>sp|SYS2_METVS|TYPE-2 serine--tRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 5 LWEPHI 10
LW PHI
Sbjct: 428 LWLPHI 433


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 5 LWEPHI 10
LW PHI
Sbjct: 428 LWLPHI 433


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 5 LWEPHI 10
LW PHI
Sbjct: 431 LWLPHI 436


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 5 LWEPHI 10
LW PHI
Sbjct: 428 LWLPHI 433


>sp|PURT_HALWD|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Haloquadratum walsbyi

Query: 4 TLWEPH 9
T W+PH
Sbjct: 237 TSWQPH 242


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 TLWEPHI 10
TLW P+I
Sbjct: 548 TLWVPYI 554


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 3 STLWEPH 9
+ +W+PH
Sbjct: 132 AVVWDPH 138


>sp|VHCD_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Archaeoglobus profundus (strain

Query: 2 LSTLWEPHI 10
+S WEP+I
Sbjct: 1 MSEEWEPNI 9


>sp|SYS2_METMP|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 LWEPHI 10
LW PH+
Sbjct: 428 LWLPHV 433


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 5 LWEPHI 10
LW PH+
Sbjct: 428 LWLPHV 433


>sp|SYS2_META3|TYPE-2 serine--tRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 LWEPHI 10
LW PH+
Sbjct: 434 LWLPHV 439


>sp|RPO10_METPE|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanosphaerula palustris (strain

Query: 1 VLSTLWE 7
V+ST WE
Sbjct: 12 VISTAWE 18




108|Sequence|536|545|WEPHITQRQV

>sp|RTCA_PYRNV|RNA 3'-terminal phosphate cyclase|Pyrobaculum neutrophilum (strain DSM

Query: 3 PHITQRQ 9
PH+ +RQ
Sbjct: 200 PHVAERQ 206


>sp|RTCA_PYRAE|RNA 3'-terminal phosphate cyclase|Pyrobaculum aerophilum (strain ATCC

Query: 3 PHITQRQ 9
PH+ +RQ
Sbjct: 200 PHVAERQ 206


>sp|R15PI_ARCFU|RIBOSE 1,5-bisphosphate isomerase|Archaeoglobus fulgidus (strain ATCC

Query: 1 WEPHITQRQV 10
W+ H+T +Q+
Sbjct: 151 WQGHLTVKQL 160


>sp|RTCA_METKA|RNA 3'-terminal phosphate cyclase|Methanopyrus kandleri (strain AV19 /

Query: 3 PHITQRQ 9
PH+ +RQ
Sbjct: 201 PHVAERQ 207




109|Sequence|541|550|TQRQVEKAWA

>sp|GSA_METMJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 QRQVEKAW 9
+RQ+EK W
Sbjct: 72 ERQLEKGW 79


>sp|GSA_HYPBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Hyperthermus butylicus (strain DSM 5456

Query: 2 QRQVEKAW 9
+RQ+EK W
Sbjct: 76 RRQLEKGW 83


>sp|HEM12_PYRCJ|GLUTAMYL-TRNA reductase 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 QVEKAWA 10
+VEKAWA
Sbjct: 296 EVEKAWA 302


>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 1 TQRQVEKAW 9
++ +EKAW
Sbjct: 169 SEEDIEKAW 177


>sp|LYSJ_PYRAE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 TQRQVEKAWA 10
++QVE+ WA
Sbjct: 54 VKKQVEEIWA 63




110|Sequence|546|555|EKAWALLQKR

>sp|DPCKG_THEPD|GTP-DEPENDENT dephospho-CoA kinase|Thermofilum pendens (strain DSM 2475

Query: 1 EKAWALLQ 8
EKAW L+Q
Sbjct: 28 EKAWRLVQ 35


>sp|Y959_METJA|UNCHARACTERIZED aminotransferase MJ0959|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EKAWALLQK 9
EKAW +++K
Sbjct: 209 EKAWEVIKK 217


>sp|PROA_METBF|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EKAWALLQKR 10
E ++ALL+KR
Sbjct: 294 EDSYALLEKR 303


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 1 EKAWALLQK 9
EKA A+LQK
Sbjct: 457 EKALAILQK 465


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EKAWALLQK 9
+KA ALLQK
Sbjct: 836 DKAMALLQK 844


>sp|PELO_PYRNV|PROTEIN pelota homolog|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 EKAWALLQK 9
EKAW LL +
Sbjct: 289 EKAWVLLSQ 297


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EKAWALLQK 9
EK W +L+K
Sbjct: 406 EKEWNVLEK 414


>sp|HEM12_PYRCJ|GLUTAMYL-TRNA reductase 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EKAWALLQK 9
EKAWA++ +
Sbjct: 298 EKAWAIVDE 306


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EKAWALLQKR 10
E+AW+ ++ R
Sbjct: 395 ERAWSFMKSR 404




111|Sequence|551|564|LLQKRIPKTHQALD

>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LQKRIPKTHQALD 14
LQ+RI +T++ALD
Sbjct: 716 LQQRILETNEALD 728


>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 6 IPKTHQALD 14
+PKTH+ LD
Sbjct: 429 VPKTHRTLD 437


>sp|MRE11_METMP|DNA double-strand break repair protein|Methanococcus maripaludis

Query: 3 QKRIPKTHQALD 14
Q +IPKT++ L+
Sbjct: 133 QNKIPKTYEDLE 144


>sp|RBLL_ARCFU|RIBULOSE bisphosphate carboxylase-like protein|Archaeoglobus fulgidus

Query: 2 LQKRIPKTHQALD 14
+++R+PK +A+D
Sbjct: 215 IEERVPKFMEAID 227


>sp|TFE_METLZ|TRANSCRIPTION factor E|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LQKRIPKTHQALD 14
L+KR+ K ALD
Sbjct: 197 LKKRLAKMQTALD 209


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 3 QKRIPKTHQA 12
QKR P T +A
Sbjct: 237 QKRFPATEEA 246


>sp|MPTA_ARCFU|GTP cyclohydrolase MptA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLQKRIPKTHQ 11
+++KR PKT Q
Sbjct: 111 IMRKRTPKTGQ 121


>sp|MRE11_THEAC|DNA double-strand break repair protein|Thermoplasma acidophilum (strain

Query: 3 QKRIPKTHQALD 14
+ RI +HQA+D
Sbjct: 152 RNRILMSHQAID 163


>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii (strain

Query: 2 LQKRIPK 8
L+KRIPK
Sbjct: 676 LRKRIPK 682


>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 5 RIPKTH 10
+IPKTH
Sbjct: 291 KIPKTH 296


>sp|RPO1C_META3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus aeolicus (strain ATCC

Query: 2 LQKRIPK 8
L+KRIPK
Sbjct: 205 LRKRIPK 211


>sp|RPO1C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus vannielii (strain ATCC

Query: 2 LQKRIPKTHQ 11
L+KR+PK +
Sbjct: 205 LRKRLPKVRE 214


>sp|PPS_METJA|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLQKRIPKTH 10
+++ +IPKTH
Sbjct: 4 VMRMQIPKTH 13






THE END