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1|Sequence|1|10|MKSILDGLAD

>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 1   MKSILDGL 8
           MKS +DGL
Sbjct: 431 MKSAVDGL 438


>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P

Query: 2   KSILDG 7
           KSILDG
Sbjct: 472 KSILDG 477


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 2   KSILDGLAD 10
           ++I DGL+D
Sbjct: 991 QAIYDGLSD 999


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 1    MKSILDGLA 9
            +  ILDGLA
Sbjct: 2046 IDEILDGLA 2054


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 1   MKSILDGL 8
           MK+ +DGL
Sbjct: 430 MKNAVDGL 437




2|Sequence|6|15|DGLADTTFRT

>sp|DPOL_VARV|DNA polymerase|Variola virus

Query: 2   GLADTTF 8
           G+A+TTF
Sbjct: 312 GMANTTF 318


>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   GLADTTF 8
           G+A+TTF
Sbjct: 312 GMANTTF 318


>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   GLADTTF 8
           G+A+TTF
Sbjct: 312 GMANTTF 318


>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)

Query: 2   GLADTTF 8
           G+A+TTF
Sbjct: 312 GMANTTF 318


>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)

Query: 2   GLADTTF 8
           G+A+TTF
Sbjct: 312 GMANTTF 318


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 2    GLADTTFRT 10
            G+A  TF+T
Sbjct: 1129 GIATLTFKT 1137


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 2    GLADTTFRT 10
            G+A  TF+T
Sbjct: 1129 GIATLTFKT 1137




3|Sequence|11|20|TTFRTITTDL

>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)

Query: 2   TFRTITTDL 10
           TFR ITT++
Sbjct: 275 TFRCITTNM 283




4|Sequence|16|25|ITTDLLYVGS

>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 1   ITTDLLYV 8
           +TT++LYV
Sbjct: 725 VTTNILYV 732


>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   TTDLLYVG 9
           TTD+ YVG
Sbjct: 319 TTDITYVG 326


>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)

Query: 2   TTDLLYVG 9
           TTD+ YVG
Sbjct: 319 TTDITYVG 326


>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   TTDLLYVG 9
           TTD+ YVG
Sbjct: 319 TTDITYVG 326


>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2   TTDLLYVG 9
           TTD+ YVG
Sbjct: 319 TTDITYVG 326


>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   TTDLLYVGS 10
           +TD+ Y GS
Sbjct: 287 STDIRYFGS 295


>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2   TTDLLYVGS 10
           +TD+ Y GS
Sbjct: 287 STDIRYFGS 295


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 2   TTDLLYV 8
           T D+LYV
Sbjct: 781 TVDVLYV 787


>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United

Query: 1   ITTDLLYVG 9
           I T+L Y G
Sbjct: 262 INTELFYYG 270




5|Sequence|21|30|LYVGSNDIQY

>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   LYVGSNDI 8
           LY+GSN +
Sbjct: 195 LYIGSNKV 202


>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   YVGSNDIQY 10
           +VG+N I+Y
Sbjct: 127 FVGTNSIEY 135


>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   YVGSNDIQY 10
           +VG+N I+Y
Sbjct: 127 FVGTNSIEY 135


>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)

Query: 2   YVGSNDIQY 10
           +VG+N I+Y
Sbjct: 127 FVGTNSIEY 135


>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)

Query: 2   YVGSNDIQY 10
           +  SNDI Y
Sbjct: 167 FCSSNDIHY 175


>sp|US02_HCMVM|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain Merlin)

Query: 1  LYVGSNDIQY 10
          LYV ++D+++
Sbjct: 87 LYVHADDVEF 96


>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2

Query: 3  VGSNDIQ 9
          VGS+D+Q
Sbjct: 55 VGSSDLQ 61


>sp|US02_HCMVT|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain Towne)

Query: 1  LYVGSNDIQY 10
          LYV ++D+++
Sbjct: 87 LYVHADDVEF 96


>sp|US02_HCMVA|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain AD169)

Query: 1  LYVGSNDIQY 10
          LYV ++D+++
Sbjct: 87 LYVHADDVEF 96


>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   LYVGSNDIQ 9
           LY G  D+Q
Sbjct: 773 LYPGREDLQ 781




6|Sequence|26|35|NDIQYEDIKG

>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12

Query: 2   DIQYEDIK 9
           D+ YED+K
Sbjct: 254 DLSYEDLK 261


>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   DIQYEDI 8
           DI++EDI
Sbjct: 300 DIEFEDI 306


>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1

Query: 2  DIQYEDI 8
          DIQ+ED+
Sbjct: 40 DIQHEDV 46


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 2    DIQYEDI 8
            DIQ EDI
Sbjct: 2241 DIQIEDI 2247


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 1   NDIQYEDI 8
           +DI Y+DI
Sbjct: 470 DDISYKDI 477


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 3   IQYEDIKG 10
           I+Y+D KG
Sbjct: 828 IRYKDFKG 835


>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P

Query: 1   NDIQYEDIKG 10
           ND++Y D  G
Sbjct: 95  NDLRYSDTFG 104


>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38

Query: 3   IQYEDIKG 10
           I Y+DI+G
Sbjct: 469 IYYQDIQG 476


>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)

Query: 3   IQYEDIKG 10
           ++Y+DI G
Sbjct: 603 VEYDDIDG 610


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1   NDIQYE 6
           NDI YE
Sbjct: 165 NDITYE 170


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 1    NDIQYEDI 8
            ND++ EDI
Sbjct: 1466 NDMEPEDI 1473


>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 2   DIQYEDIK 9
           D +YE+IK
Sbjct: 733 DSEYEEIK 740


>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann

Query: 2   DIQYEDIK 9
           D +YE+IK
Sbjct: 733 DSEYEEIK 740


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 3    IQYEDIK 9
            +QY+D+K
Sbjct: 1457 LQYKDLK 1463


>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 2   DIQYEDIK 9
           D +YE+IK
Sbjct: 733 DSEYEEIK 740


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 3    IQYEDIK 9
            +QY+D+K
Sbjct: 1457 LQYKDLK 1463


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 3    IQYEDIK 9
            +QY+D+K
Sbjct: 1459 LQYKDLK 1465


>sp|RP22_VAR67|DNA-DIRECTED RNA polymerase 22 kDa|Variola virus (isolate

Query: 2  DIQYEDI 8
          DIQY D+
Sbjct: 38 DIQYNDL 44


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 3    IQYEDIK 9
            +QY+D+K
Sbjct: 1459 LQYKDLK 1465


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 1    NDIQYEDI 8
            ND++ EDI
Sbjct: 1466 NDMEPEDI 1473


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 3    IQYEDIK 9
            +QY+D+K
Sbjct: 1456 LQYKDLK 1462


>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)

Query: 3   IQYEDIKG 10
           + +ED+KG
Sbjct: 480 VVFEDVKG 487


>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)

Query: 3   IQYEDIKG 10
           + +ED+KG
Sbjct: 480 VVFEDVKG 487


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 3    IQYEDIK 9
            +QY+D+K
Sbjct: 1456 LQYKDLK 1462


>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)

Query: 3   IQYEDIKG 10
           + +ED+KG
Sbjct: 480 VVFEDVKG 487


>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 3   IQYEDIKG 10
           + +ED+KG
Sbjct: 472 VVFEDVKG 479


>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United

Query: 1   NDIQYED 7
           NDI Y+D
Sbjct: 155 NDIVYQD 161


>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)

Query: 3   IQYEDIKG 10
           + +ED+KG
Sbjct: 472 VVFEDVKG 479


>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)

Query: 1   NDIQYEDIKG 10
           ND + ED+ G
Sbjct: 272 NDFKAEDLYG 281


Query: 3   IQYEDIKG 10
           + +ED+KG
Sbjct: 487 VVFEDVKG 494


>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)

Query: 3   IQYEDIKG 10
           + +ED+KG
Sbjct: 471 VVFEDVKG 478


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 2   DIQYEDIK 9
           +I+Y D+K
Sbjct: 827 EIEYPDVK 834




7|Sequence|31|40|EDIKGDMASK

>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1   EDIKGD 6
           EDI+GD
Sbjct: 358 EDIRGD 363


>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)

Query: 2  DIKGDMA 8
          +IKGD+A
Sbjct: 88 EIKGDLA 94


>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)

Query: 2  DIKGDMA 8
          +IKGD+A
Sbjct: 88 EIKGDLA 94


>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 2  DIKGDMA 8
          +IKGD+A
Sbjct: 88 EIKGDLA 94


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 2    DIKGDMA 8
            DI+GD++
Sbjct: 1688 DIRGDLS 1694


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 3    IKGDMA 8
            IKGDM+
Sbjct: 1821 IKGDMS 1826


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 2    DIKGDMA 8
            DIKGD +
Sbjct: 1688 DIKGDYS 1694




8|Sequence|36|45|DMASKLGYFP

>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 3   ASKLGYFP 10
           A +LG FP
Sbjct: 606 AERLGIFP 613




9|Sequence|41|50|LGYFPQKFPL

>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)

Query: 2  GYFPQKFPL 10
          GYFP   PL
Sbjct: 34 GYFPSTIPL 42


>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15

Query: 4   FPQKFPL 10
           FP KFP 
Sbjct: 541 FPHKFPF 547


>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38

Query: 4   FPQKFPL 10
           FP KFP 
Sbjct: 543 FPNKFPF 549


>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17

Query: 4   FPQKFPL 10
           FP KFP 
Sbjct: 548 FPNKFPF 554


>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22

Query: 4   FPQKFPL 10
           FP KFP 
Sbjct: 547 FPNKFPF 553


>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37

Query: 4   FPQKFPL 10
           FP KFP 
Sbjct: 548 FPNKFPF 554


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1   LGYFPQKFP 9
           +G  P+KFP
Sbjct: 600 MGTRPEKFP 608


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1   LGYFPQKFP 9
           +G  P+KFP
Sbjct: 600 MGTRPEKFP 608


>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42

Query: 4   FPQKFPL 10
           FP  FPL
Sbjct: 582 FPNPFPL 588


>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32

Query: 4   FPQKFPL 10
           FP  FPL
Sbjct: 581 FPNPFPL 587


>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60

Query: 4   FPQKFPL 10
           FP K PL
Sbjct: 548 FPNKLPL 554


>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54

Query: 4   FPQKFPL 10
           FP +FP 
Sbjct: 571 FPNRFPF 577


>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 4   FPQKFPL 10
           FP +FP 
Sbjct: 546 FPNRFPF 552


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 2   GYFPQKF 8
           GY+P+++
Sbjct: 945 GYYPKRY 951


>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16

Query: 4   FPQKFPL 10
           FP +FP 
Sbjct: 588 FPNEFPF 594


>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24

Query: 4   FPQKFPL 10
           FP  FP+
Sbjct: 546 FPNPFPM 552


>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21

Query: 4   FPQKFPL 10
           FP  FP+
Sbjct: 542 FPNPFPM 548


>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20

Query: 4   FPQKFPL 10
           FP  FP+
Sbjct: 544 FPNPFPM 550


>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14

Query: 4   FPQKFPL 10
           FP  FP+
Sbjct: 544 FPNPFPM 550


>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 4   FPQKFPL 10
           FP K P+
Sbjct: 533 FPNKLPM 539


>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19

Query: 4   FPQKFPL 10
           FP  FP+
Sbjct: 543 FPNPFPM 549


>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25

Query: 4   FPQKFPL 10
           FP  FP+
Sbjct: 543 FPNPFPM 549


>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41

Query: 3   YFPQKFPL 10
           YF + FPL
Sbjct: 553 YFNKPFPL 560


>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8

Query: 4   FPQKFPL 10
           FP  FP+
Sbjct: 542 FPNPFPM 548


>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36

Query: 4   FPQKFPL 10
           FP  FP+
Sbjct: 543 FPNPFPM 549


>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12

Query: 4   FPQKFPL 10
           FP  FP+
Sbjct: 543 FPHPFPM 549


>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P

Query: 3  YFPQKFPL 10
          +FP + PL
Sbjct: 28 WFPSQIPL 35


>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7

Query: 4   FPQKFPL 10
           FP  FP+
Sbjct: 543 FPNPFPM 549


>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   FPQKFP 9
           +P+KFP
Sbjct: 538 YPKKFP 543


>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4

Query: 4   FPQKFPL 10
           FP K P+
Sbjct: 539 FPNKMPI 545


>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5

Query: 4   FPQKFPL 10
           FP  FP+
Sbjct: 545 FPNPFPM 551


>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b

Query: 4   FPQKFPL 10
           FP  FP+
Sbjct: 545 FPNPFPM 551


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 2  GYFPQ 6
          GYFP+
Sbjct: 65 GYFPK 69


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 2  GYFPQ 6
          GYFP+
Sbjct: 65 GYFPK 69


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 2  GYFPQ 6
          GYFP+
Sbjct: 65 GYFPK 69


>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   LGYFPQKFP 9
           +GY PQ+ P
Sbjct: 469 VGYCPQQGP 477


>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   LGYFPQKFP 9
           +GY PQ+ P
Sbjct: 469 VGYCPQQGP 477


>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   LGYFPQKFP 9
           +GY PQ+ P
Sbjct: 469 VGYCPQQGP 477




10|Sequence|46|55|QKFPLTSFRG

>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)

Query: 3  FPLTSFRG 10
          FPLT F+G
Sbjct: 15 FPLTHFQG 22


>sp|DUT_HHV8P|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 8 type P

Query: 1   QKFPLTSFRG 10
           +K+P+T +RG
Sbjct: 96  RKYPVTLYRG 105


>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)

Query: 4   PLTSFRG 10
           PL++FRG
Sbjct: 453 PLSAFRG 459


>sp|PHOSP_HRSVA|PHOSPHOPROTEIN respiratory syncytial virus A

Query: 1  QKFPLTSFR 9
          Q+ PL SF+
Sbjct: 80 QRKPLVSFK 88


>sp|PHOSP_HRSV|PHOSPHOPROTEIN respiratory syncytial virus

Query: 1  QKFPLTSFR 9
          Q+ PL SF+
Sbjct: 80 QRKPLVSFK 88


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 1   QKFPLTS 7
           Q+FP+T+
Sbjct: 534 QRFPITN 540


>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28

Query: 2   KFPLTS 7
           KFPLT+
Sbjct: 604 KFPLTT 609


>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3

Query: 2   KFPLTS 7
           KFPLT+
Sbjct: 601 KFPLTT 606


>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)

Query: 5   LTSFRG 10
           LTS+RG
Sbjct: 526 LTSYRG 531


>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 4  PLTSFRG 10
          PLT ++G
Sbjct: 34 PLTKYKG 40




11|Sequence|51|60|TSFRGSPFQE

>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 1    TSFRGSPFQE 10
            T+F GS FQE
Sbjct: 2162 TAFGGSVFQE 2171


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 1    TSFRGSPFQE 10
            T+F GS FQE
Sbjct: 2161 TAFGGSVFQE 2170


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 1    TSFRGSPFQE 10
            T+F GS FQE
Sbjct: 2161 TAFGGSVFQE 2170


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 4    RGSPFQE 10
            RG PF E
Sbjct: 1818 RGDPFPE 1824


>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)

Query: 1   TSFRGSPFQE 10
           T FR  P Q+
Sbjct: 466 TDFRAQPLQD 475


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 4    RGSPFQE 10
            RG PF E
Sbjct: 1818 RGDPFPE 1824


>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain

Query: 1   TSFRGSPFQE 10
           T FR  P Q+
Sbjct: 466 TDFRAQPLQD 475


>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)

Query: 1   TSFRGSPFQE 10
           T FR  P Q+
Sbjct: 466 TDFRAQPLQD 475


>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)

Query: 1  TSFRGSPF 8
          +SF  SPF
Sbjct: 52 SSFTSSPF 59


>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)

Query: 1  TSFRGSPF 8
          +SF  SPF
Sbjct: 52 SSFAASPF 59




12|Sequence|56|65|SPFQEKMTAG

>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain

Query: 2  PFQEKMTA 9
          PFQE++ +
Sbjct: 82 PFQERVAS 89


>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)

Query: 3   FQEKMTAG 10
           + EKMT G
Sbjct: 411 YMEKMTTG 418


>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United

Query: 2   PFQEKMTAG 10
           PFQ   T G
Sbjct: 313 PFQHHATVG 321


>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate

Query: 2   PFQEKMTAG 10
           PFQ   T G
Sbjct: 313 PFQHHATVG 321


>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 2   PFQEKMTAG 10
           PFQ   T G
Sbjct: 313 PFQHHATVG 321


>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United

Query: 2   PFQEKMTAG 10
           PFQ   T G
Sbjct: 313 PFQHHATVG 321


>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 2   PFQEKMTAG 10
           PFQ   T G
Sbjct: 313 PFQHHATVG 321


>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United

Query: 2   PFQEKMTAG 10
           PFQ   T G
Sbjct: 313 PFQHHATVG 321


>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United

Query: 2   PFQEKMTAG 10
           PFQ   T G
Sbjct: 313 PFQHHATVG 321


>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   SPFQEKMTAG 10
           SP+    TAG
Sbjct: 804 SPYPSSSTAG 813


>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   SPFQEKMTAG 10
           SP+    TAG
Sbjct: 804 SPYPSSSTAG 813




13|Sequence|61|70|KMTAGDNPQL

>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)

Query: 1   KMTAGDNPQL 10
           KMT  +NP+L
Sbjct: 253 KMTDINNPEL 262


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 3  TAGDNP 8
          T GDNP
Sbjct: 37 TPGDNP 42


Query: 1    KMTA-GDNPQL 10
            ++TA GD PQL
Sbjct: 1401 RVTAHGDTPQL 1411


>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58

Query: 1   KMTAGDNPQ 9
           K +AG NP+
Sbjct: 632 KCSAGQNPR 640


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 3    TAGDNP 8
            ++GDNP
Sbjct: 1834 SSGDNP 1839


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 3    TAGDNP 8
            ++GDNP
Sbjct: 1834 SSGDNP 1839


>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)

Query: 3   TAGDNPQL 10
           T+G++P+L
Sbjct: 119 TSGNSPEL 126


>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)

Query: 3   TAGDNPQL 10
           T+G++P+L
Sbjct: 403 TSGNSPEL 410


>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   TAGDNPQL 10
           T+G++P+L
Sbjct: 403 TSGNSPEL 410


>sp|UL39_HCMVA|UNCHARACTERIZED protein UL39|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  MTAGDNPQ 9
          M  G NPQ
Sbjct: 72 MIVGQNPQ 79




14|Sequence|66|75|DNPQLVPADQ

>sp|VP40_MABVO|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 4  QLVPADQ 10
          QL+PADQ
Sbjct: 26 QLIPADQ 32


>sp|VP40_MABVR|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ravn-87)

Query: 4  QLVPADQ 10
          QL+PADQ
Sbjct: 26 QLIPADQ 32


>sp|VP40_MABVM|MATRIX protein VP40|Lake Victoria marburgvirus (strain Musoke-80)

Query: 4  QLVPADQ 10
          QL+PADQ
Sbjct: 26 QLIPADQ 32


>sp|VP40_MABVA|MATRIX protein VP40|Lake Victoria marburgvirus (strain Angola/2005)

Query: 4  QLVPADQ 10
          QL+PADQ
Sbjct: 26 QLIPADQ 32


>sp|VP40_MABVP|MATRIX protein VP40|Lake Victoria marburgvirus (strain Popp-67)

Query: 4  QLVPADQ 10
          QL+PADQ
Sbjct: 26 QLIPADQ 32


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 1    DNPQLVPAD 9
            DN  +VPAD
Sbjct: 1443 DNKWIVPAD 1451


>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)

Query: 2   NPQLVPAD 9
           NP++VP D
Sbjct: 393 NPRVVPGD 400


>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82

Query: 1   DNPQLVPAD 9
           DNP   PAD
Sbjct: 254 DNPAFEPAD 262


>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 4   QLVPADQ 10
           QLVPA++
Sbjct: 865 QLVPAEE 871


>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)

Query: 1  DNPQLVPAD 9
          DN +++P D
Sbjct: 71 DNDRIIPID 79


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 2    NPQLVPAD 9
            NP+ VP D
Sbjct: 1357 NPRGVPGD 1364


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 1   DNPQLVPAD 9
           D  Q+VP+D
Sbjct: 950 DQIQMVPSD 958


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2    NPQLVPAD 9
            NP+ VP D
Sbjct: 1357 NPRGVPGD 1364


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2    NPQLVPAD 9
            NP+ VP D
Sbjct: 1357 NPRGVPGD 1364




15|Sequence|71|80|VPADQVNITE

>sp|VE2_HPV58|REGULATORY protein E2|Human papillomavirus 58

Query: 1   VPADQVNITE 10
           +P+DQ++ TE
Sbjct: 199 IPSDQISTTE 208


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 1   VPADQVNIT 9
           V  DQVNIT
Sbjct: 566 VGTDQVNIT 574


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 1   VPADQVNIT 9
           V  DQVNIT
Sbjct: 564 VGTDQVNIT 572


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 1   VPADQVNIT 9
           V  DQVNIT
Sbjct: 566 VGTDQVNIT 574


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 1   VPADQVNIT 9
           V  DQVNIT
Sbjct: 566 VGTDQVNIT 574


>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate

Query: 5   QVNITE 10
           Q+NITE
Sbjct: 176 QINITE 181


>sp|VEGFH_ORFN2|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ2) (OV

Query: 1  VPADQVNIT 9
          VP ++VN++
Sbjct: 79 VPTEEVNVS 87


>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)

Query: 2  PADQVNIT 9
          P D++N+T
Sbjct: 68 PPDELNLT 75


>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)

Query: 2  PADQVNIT 9
          P D++N+T
Sbjct: 68 PPDELNLT 75


>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)

Query: 2  PADQVNIT 9
          P D++N+T
Sbjct: 68 PPDELNLT 75




16|Sequence|76|85|VNITEFYNKS

>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 2   NITEFYNKS 10
           ++T+FY KS
Sbjct: 120 DLTQFYQKS 128


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 2   NITEFYNKS 10
           ++T+FY KS
Sbjct: 119 DLTQFYQKS 127


>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)

Query: 3  ITEFYNK 9
          ITEF+NK
Sbjct: 30 ITEFFNK 36


>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain

Query: 3  ITEFYNK 9
          ITEF+NK
Sbjct: 30 ITEFFNK 36


>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain

Query: 3  ITEFYNK 9
          ITEF+NK
Sbjct: 32 ITEFFNK 38


>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2  NITEFYN 8
          N+TE++N
Sbjct: 77 NVTEYFN 83


>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   VNITEFYNKS 10
           V+ITE YN +
Sbjct: 165 VSITEQYNTA 174


>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   VNITEFYNKS 10
           V+ITE YN +
Sbjct: 165 VSITEQYNTA 174


>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus

Query: 3  ITEFYNK 9
          IT+F+NK
Sbjct: 33 ITDFFNK 39


>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate

Query: 3  ITEFYNK 9
          IT+F+NK
Sbjct: 33 ITDFFNK 39


>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)

Query: 1   VNITEFYNK 9
           +N+TE Y +
Sbjct: 280 INVTEVYGE 288


>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   NITEFYNKS 10
           NIT++ NK+
Sbjct: 134 NITDWENKT 142


>sp|SLFN_VACCC|SCHLAFEN-LIKE protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   ITEFYNKS 10
           + EF+N+S
Sbjct: 101 VEEFFNRS 108




17|Sequence|81|90|FYNKSLSSFK

>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1    FYNKSLSSF 9
             YN SLS+F
Sbjct: 3686 LYNPSLSNF 3694


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1    FYNKSLSSF 9
             YN SLS+F
Sbjct: 3686 LYNPSLSNF 3694


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 2    YNKSLSSFK 10
            YN  LS FK
Sbjct: 1126 YNDCLSKFK 1134


>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)

Query: 2   YNKSLSS 8
           YNKSL +
Sbjct: 145 YNKSLGA 151


>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)

Query: 2   YNKSLSS 8
           YNKSL +
Sbjct: 145 YNKSLGA 151


>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)

Query: 2   YNKSLSS 8
           YNKSL +
Sbjct: 144 YNKSLGA 150


>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)

Query: 2   YNKSLSS 8
           YNKSL +
Sbjct: 145 YNKSLGA 151


>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)

Query: 2   YNKSLSS 8
           YNKSL +
Sbjct: 145 YNKSLGA 151


>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)

Query: 2   YNKSLSS 8
           YNKSL +
Sbjct: 145 YNKSLGA 151




18|Sequence|86|95|LSSFKENEEN

>sp|HBSAG_HBVB8|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 3  SFKENEEN 10
          +FK N EN
Sbjct: 33 AFKANSEN 40


>sp|HBSAG_HBVB7|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 3  SFKENEEN 10
          +FK N EN
Sbjct: 33 AFKANSEN 40


>sp|HBSAG_HBVB6|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 3  SFKENEEN 10
          +FK N EN
Sbjct: 33 AFKANSEN 40


>sp|HBSAG_HBVB5|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 3  SFKENEEN 10
          +FK N EN
Sbjct: 33 AFKANSEN 40


>sp|HBSAG_HBVB4|LARGE envelope protein|Hepatitis B virus genotype B/C

Query: 3  SFKENEEN 10
          +FK N EN
Sbjct: 22 AFKANSEN 29


>sp|HBSAG_HBVB1|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 3  SFKENEEN 10
          +FK N EN
Sbjct: 22 AFKANSEN 29




19|Sequence|91|100|ENEENIQCGE

>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   ENIQC 8
           ENIQC
Sbjct: 185 ENIQC 189


>sp|UL24_VZVO|PROTEIN UL24 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 3   EENIQCG 9
           EEN  CG
Sbjct: 225 EENAACG 231


>sp|UL24_VZVD|PROTEIN UL24 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   EENIQCG 9
           EEN  CG
Sbjct: 225 EENAACG 231


>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)

Query: 1   ENEENIQCG 9
           ++ +NI CG
Sbjct: 246 QDRKNIHCG 254


>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 2   NEENIQCG 9
           N+EN+Q G
Sbjct: 602 NDENLQQG 609




20|Sequence|96|105|IQCGENFMDI

>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1    IQCGENFMDI 10
            + CG +F+DI
Sbjct: 3001 VYCGSDFIDI 3010


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1    IQCGENFMDI 10
            + CG +F+DI
Sbjct: 3001 VYCGSDFIDI 3010


>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)

Query: 1  IQCGENFMD 9
          I+CGE   D
Sbjct: 87 IECGERIAD 95


>sp|UL88_HHV6Z|PROTEIN U59|Human herpesvirus 6B (strain Z29)

Query: 1  IQCGENFMD 9
          I+CGE   D
Sbjct: 87 IECGERIAD 95


>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain

Query: 1   IQCGENFMDI 10
           + CG +F+D+
Sbjct: 419 LYCGGDFLDV 428


>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain

Query: 1   IQCGENFMDI 10
           + CG +F+D+
Sbjct: 419 LYCGGDFLDV 428


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 1   IQCGENFMD 9
           I+C E FM+
Sbjct: 717 IKCFEKFME 725


>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)

Query: 1  IQCGEN 6
          +QCG N
Sbjct: 64 VQCGSN 69


>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)

Query: 1  IQCGEN 6
          +QCG N
Sbjct: 64 VQCGSN 69


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 1  IQCGEN 6
          +QCG N
Sbjct: 73 VQCGSN 78


>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)

Query: 5   ENFMDI 10
           ENFMD+
Sbjct: 955 ENFMDL 960


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3    CGENFMDI 10
            CG +F D+
Sbjct: 3043 CGRDFFDL 3050


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 2    QCGENF 7
            Q GENF
Sbjct: 1582 QAGENF 1587


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2    QCGENF 7
            Q GENF
Sbjct: 1582 QAGENF 1587


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2    QCGENF 7
            Q GENF
Sbjct: 1582 QAGENF 1587


>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United

Query: 2   QCGENFMDI 10
           +C EN +DI
Sbjct: 370 ECVENILDI 378


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 3    CGENFMDI 10
            CG +F D+
Sbjct: 3043 CGRDFFDL 3050


>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 1   IQCGEN 6
           +QCG N
Sbjct: 273 LQCGHN 278


>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)

Query: 1   IQCGEN 6
           +QCG N
Sbjct: 273 LQCGHN 278


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 3    CGENF 7
            CGE+F
Sbjct: 2039 CGEDF 2043


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 3   CGENFMDI 10
           C EN +DI
Sbjct: 402 CQENNLDI 409


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 3   CGENFMDI 10
           C EN +DI
Sbjct: 402 CQENNLDI 409


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 3   CGENFMDI 10
           C EN +DI
Sbjct: 402 CQENNLDI 409


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 4   GENFMD 9
           G+NFM+
Sbjct: 828 GQNFME 833


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 4   GENFMD 9
           G+NFM+
Sbjct: 828 GQNFME 833


>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain

Query: 1   IQCGENF 7
           ++CG+N 
Sbjct: 195 VECGKNL 201


>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain

Query: 1   IQCGENF 7
           ++CG+N 
Sbjct: 195 VECGKNL 201


>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)

Query: 1   IQCGENFMD 9
           ++C E+F+D
Sbjct: 554 LKCLESFID 562




21|Sequence|101|110|NFMDIECFMV

>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)

Query: 1   NFMDIECFM 9
           N +DIEC M
Sbjct: 205 NEIDIECIM 213


>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   NFMDIECFM 9
           N +DIEC M
Sbjct: 205 NEIDIECIM 213


>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   NFMDIECFM 9
           N +DIEC M
Sbjct: 205 NEIDIECIM 213


>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   NFMDIECFM 9
           N +DIEC M
Sbjct: 205 NEIDIECIM 213


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 4   DIECFM 9
           D+ECF+
Sbjct: 633 DVECFL 638


>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV

Query: 2   FMDIEC 7
           F+DIEC
Sbjct: 165 FLDIEC 170


>sp|PG055_VACCP|PROTEIN OPG055|Vaccinia virus (strain L-IVP) (VACV)

Query: 1   NFMDIECFMV 10
           NF   +CF+V
Sbjct: 111 NFRPADCFLV 120


>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   FMDIEC 7
           F+DIEC
Sbjct: 164 FLDIEC 169


>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)

Query: 2   FMDIEC 7
           F+DIEC
Sbjct: 164 FLDIEC 169


>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   NFMDIECFMV 10
           NF   +CF+V
Sbjct: 114 NFRPADCFLV 123


>sp|DPOL_VARV|DNA polymerase|Variola virus

Query: 2   FMDIEC 7
           F+DIEC
Sbjct: 164 FLDIEC 169


>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   FMDIEC 7
           F+DIEC
Sbjct: 164 FLDIEC 169


>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)

Query: 2   FMDIEC 7
           F+DIEC
Sbjct: 164 FLDIEC 169


>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)

Query: 1   NFMDIECFMV 10
           NF   +CF+V
Sbjct: 114 NFRPADCFLV 123


>sp|OX2V_HHV6U|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6A (strain

Query: 1   NFMDIEC 7
           NF+D+ C
Sbjct: 157 NFLDVTC 163


>sp|PG055_VARV|PROTEIN OPG055|Variola virus

Query: 1   NFMDIECFMV 10
           NF   +CF+V
Sbjct: 114 NFRPADCFLV 123


>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   NFMDIECFMV 10
           NF   +CF+V
Sbjct: 114 NFRPADCFLV 123


>sp|OX2V_HHV6Z|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6B (strain

Query: 1   NFMDIEC 7
           NF+D+ C
Sbjct: 158 NFLDVTC 164


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 1   NFMDIECFMV 10
           NF+ I+C ++
Sbjct: 290 NFLLIQCSLI 299


>sp|PHOSP_ABLVH|PHOSPHOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 1  NFMDIECFM 9
          N  D+EC M
Sbjct: 69 NPQDVECRM 77


>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /

Query: 4   DIECF 8
           D+ECF
Sbjct: 374 DVECF 378


>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)

Query: 4   DIECF 8
           D+ECF
Sbjct: 374 DVECF 378


>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4   DIECF 8
           D+ECF
Sbjct: 374 DVECF 378


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 3   MDIECF 8
           +D++CF
Sbjct: 176 VDVDCF 181


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 3   MDIECF 8
           +D++CF
Sbjct: 176 VDVDCF 181


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 3   MDIECF 8
           +D++CF
Sbjct: 174 VDVDCF 179


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 3   MDIECF 8
           +D++CF
Sbjct: 176 VDVDCF 181


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 3   MDIECF 8
           +D++CF
Sbjct: 176 VDVDCF 181


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 3   MDIECF 8
           +D++CF
Sbjct: 176 VDVDCF 181


>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)

Query: 3   MDIECF 8
           +D++CF
Sbjct: 176 VDVDCF 181


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 3   MDIECF 8
           +D++CF
Sbjct: 176 VDVDCF 181


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 3   MDIECF 8
           +D++CF
Sbjct: 177 VDVDCF 182


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 3   MDIECF 8
           +D++CF
Sbjct: 177 VDVDCF 182




22|Sequence|106|115|ECFMVLNPSQ

>sp|C_MEASE|PROTEIN C|Measles virus (strain Edmonston) (MeV)

Query: 1   ECFMVLNPSQ 10
           +  MV+ PSQ
Sbjct: 126 QALMVIAPSQ 135


>sp|C_MEASC|PROTEIN C|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1   ECFMVLNPSQ 10
           +  MV+ PSQ
Sbjct: 126 QALMVIAPSQ 135


>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)

Query: 4  MVLNPSQ 10
          ++LNP+Q
Sbjct: 85 LILNPTQ 91


>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)

Query: 4  MVLNPSQ 10
          ++LNP+Q
Sbjct: 85 LILNPTQ 91


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    ECFMVLNP 8
            EC+  L+P
Sbjct: 1981 ECYRTLHP 1988


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    ECFMVLNP 8
            EC+  L+P
Sbjct: 1987 ECYRTLHP 1994


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    ECFMVLNP 8
            EC+  L+P
Sbjct: 1973 ECYRTLHP 1980


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    ECFMVLNP 8
            EC+  L+P
Sbjct: 1981 ECYRTLHP 1988


>sp|IL1BP_MONPV|INTERLEUKIN-1-BINDING protein|Monkeypox virus (MPXV)

Query: 4  MVLNPSQ 10
          ++LNP+Q
Sbjct: 85 LILNPTQ 91


>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)

Query: 3 FMVLNPS 9
         F ++NPS
Sbjct: 2 FSIINPS 8


>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 FMVLNPS 9
         F ++NPS
Sbjct: 2 FSIINPS 8


>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant

Query: 3 FMVLNPS 9
         F ++NPS
Sbjct: 2 FSIINPS 8


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 1   ECFMVLNP 8
           +CF +L+P
Sbjct: 134 QCFPILHP 141


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3    FMVLNPS 9
            F+V NPS
Sbjct: 5470 FLVKNPS 5476


>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2

Query: 1   ECFMVLNP 8
           +CF +L+P
Sbjct: 134 QCFPILHP 141


>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   CFMVLNPSQ 10
           CF + NP +
Sbjct: 668 CFSIPNPHK 676


>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2

Query: 1   ECFMVLNP 8
           +CF +L+P
Sbjct: 134 QCFPILHP 141




23|Sequence|111|120|LNPSQQLAIA

>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 2   NPSQQLAI 9
           NP Q+LAI
Sbjct: 963 NPKQKLAI 970


>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   NPSQQLAI 9
           NP+QQL +
Sbjct: 429 NPTQQLPV 436


>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2   NPSQQLAI 9
           NP+QQL +
Sbjct: 429 NPTQQLPV 436


>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   NPSQQLAI 9
           NP+QQL +
Sbjct: 429 NPTQQLPV 436


>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)

Query: 1   LNPSQQLAI 9
           L+P+Q+LA+
Sbjct: 340 LSPTQKLAV 348


>sp|TRX2_HHV7M|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain MUK)

Query: 1   LNPSQQLAI 9
           L PSQQL +
Sbjct: 111 LKPSQQLLV 119


>sp|TRX2_HHV7J|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain JI)

Query: 1   LNPSQQLAI 9
           L PSQQL +
Sbjct: 111 LKPSQQLLV 119


>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain

Query: 1   LNPSQQL 7
           +NP QQL
Sbjct: 313 INPHQQL 319


>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)

Query: 1   LNPSQQL 7
           +NP QQL
Sbjct: 313 INPHQQL 319


>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)

Query: 4   SQQLAIA 10
           +QQLAIA
Sbjct: 158 TQQLAIA 164


>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain

Query: 4   SQQLAIA 10
           +QQLAIA
Sbjct: 158 TQQLAIA 164


>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)

Query: 4   SQQLAIA 10
           +QQLAIA
Sbjct: 158 TQQLAIA 164


>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)

Query: 4   SQQLAIA 10
           +QQLAIA
Sbjct: 158 TQQLAIA 164


>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)

Query: 4   SQQLAIA 10
           +QQLAIA
Sbjct: 158 TQQLAIA 164




24|Sequence|116|125|QLAIAVLSLT

 ***** No hits found ******


25|Sequence|121|130|VLSLTLGTFT

>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)

Query: 1  VLSLTLGTF 9
          VLS T GTF
Sbjct: 5  VLSTTPGTF 13


>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   SLTLGT 8
           SLTLGT
Sbjct: 235 SLTLGT 240


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   SLTLGT 8
           SLTLGT
Sbjct: 235 SLTLGT 240


>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)

Query: 3   SLTLGT 8
           SLTLGT
Sbjct: 290 SLTLGT 295


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 5    TLGTFT 10
            TLG+FT
Sbjct: 1862 TLGSFT 1867


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 5    TLGTFT 10
            TLG+FT
Sbjct: 1863 TLGSFT 1868




26|Sequence|126|135|LGTFTVLENL

>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus

Query: 4   FTVLEN 9
           FTVLEN
Sbjct: 464 FTVLEN 469


>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United

Query: 2   GTFTVLENL 10
           GTF   ENL
Sbjct: 265 GTFITTENL 273


>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)

Query: 1   LGTFTVLENL 10
           LGTFTV++++
Sbjct: 479 LGTFTVIKSV 488


>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   LGTFTVLENL 10
           LGTFTV++++
Sbjct: 763 LGTFTVIKSV 772


>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)

Query: 1   LGTFTVLENL 10
           LGTFTV++++
Sbjct: 763 LGTFTVIKSV 772


>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human

Query: 1  LGTFTVLEN 9
          LG F  LEN
Sbjct: 19 LGPFNPLEN 27


>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human

Query: 1  LGTFTVLEN 9
          LG F  LEN
Sbjct: 19 LGPFNPLEN 27


>sp|VP1_POVBK|MAJOR capsid protein VP1|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 1   LGTFTVLENL 10
            GTFT  EN+
Sbjct: 222 FGTFTGGENV 231


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 4    FTVLENL 10
            FTV ENL
Sbjct: 1322 FTVNENL 1328


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 4    FTVLENL 10
            FTV ENL
Sbjct: 1320 FTVNENL 1326


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 4    FTVLENL 10
            FTV ENL
Sbjct: 1341 FTVNENL 1347




27|Sequence|131|140|VLENLLVLCV

>sp|E434_ADE12|EARLY E4 34 kDa protein|Human adenovirus A serotype 12

Query: 1   VLENLLVLC 9
           +L N+LVLC
Sbjct: 205 ILNNMLVLC 213


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank

Query: 1   VLENLLVLC 9
           VLENL+  C
Sbjct: 239 VLENLVEYC 247


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    LLVLCV 10
            LLVLCV
Sbjct: 2416 LLVLCV 2421


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    LLVLCV 10
            LLVLCV
Sbjct: 2413 LLVLCV 2418


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    LLVLCV 10
            LLVLCV
Sbjct: 2416 LLVLCV 2421


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 5    LLVLCV 10
            LLVLCV
Sbjct: 2416 LLVLCV 2421


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    LLVLCV 10
            LLVLCV
Sbjct: 2416 LLVLCV 2421


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    LLVLCV 10
            LLVLCV
Sbjct: 2416 LLVLCV 2421


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    LLVLCV 10
            LL+LCV
Sbjct: 2416 LLILCV 2421


>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain

Query: 1  VLENLLVL 8
          +LENL+ L
Sbjct: 25 ILENLITL 32


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1   VLENLLVLC 9
           +LENL+  C
Sbjct: 239 ILENLVDYC 247


>sp|VE6_HPV26|PROTEIN E6|Human papillomavirus type 26

Query: 2  LENLLVLCV 10
          L+NL V CV
Sbjct: 23 LQNLQVQCV 31




28|Sequence|136|145|LVLCVILHSR

>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   LVLCVILHSR 10
           LV C ++H R
Sbjct: 222 LVECYVMHGR 231


>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   LVLCVILHSR 10
           LV C ++H R
Sbjct: 222 LVECYVMHGR 231


>sp|AP3A_SARS2|ORF3A protein|Severe acute respiratory syndrome coronavirus

Query: 4   CVILHS 9
           CV+LHS
Sbjct: 200 CVVLHS 205


>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)

Query: 3   LCVILHSR 10
           LC+ LH R
Sbjct: 109 LCLFLHDR 116


>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   LCVILH 8
           LCV LH
Sbjct: 124 LCVTLH 129


>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   LCVILH 8
           LCV LH
Sbjct: 124 LCVTLH 129


>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   LCVILH 8
           LCV LH
Sbjct: 130 LCVTLH 135


>sp|PG161_VACCC|PROTEIN OPG161|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4   CVILHS 9
           C ILHS
Sbjct: 109 CYILHS 114


>sp|PG161_MONPV|PROTEIN OPG161|Monkeypox virus (MPXV)

Query: 4   CVILHS 9
           C ILHS
Sbjct: 109 CYILHS 114


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 4    CVILHSR 10
            CV+ HS+
Sbjct: 5315 CVVCHSQ 5321


>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55

Query: 4  CVILH 8
          CV+LH
Sbjct: 40 CVLLH 44


>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44

Query: 4  CVILH 8
          CV+LH
Sbjct: 40 CVLLH 44




29|Sequence|141|150|ILHSRSLRCR

>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4

Query: 2   LHSRSLRC 9
           L SR+ RC
Sbjct: 432 LQSRATRC 439


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 3    HSRSLRC 9
            HSR+ RC
Sbjct: 1187 HSRNWRC 1193


>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   ILHSRSL 7
           +LHSRS+
Sbjct: 129 VLHSRSV 135


>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   ILHSRSL 7
           +LHSRS+
Sbjct: 129 VLHSRSV 135


>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   ILHSRSL 7
           +LHSRS+
Sbjct: 129 VLHSRSV 135


>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16

Query: 2   LHSRSLRC 9
           LH +SL C
Sbjct: 262 LHIQSLAC 269




30|Sequence|146|155|SLRCRPSYHF

>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 4    CRPSYH 9
            C PSYH
Sbjct: 1329 CAPSYH 1334


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 4    CRPSYH 9
            C PSYH
Sbjct: 1329 CAPSYH 1334


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 4    CRPSYH 9
            C PSYH
Sbjct: 1329 CAPSYH 1334


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 4    CRPSYH 9
            C PSYH
Sbjct: 1329 CAPSYH 1334


>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)

Query: 2  LRCRPSYHF 10
          LRCRP   F
Sbjct: 67 LRCRPETRF 75


>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)

Query: 1   SLRCRPSYHF 10
           +L CR +YH+
Sbjct: 110 ALACRDAYHW 119


>sp|UL38_HCMVA|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4  CRPSYHF 10
          C PSY F
Sbjct: 66 CDPSYEF 72


>sp|UL38_HCMVM|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4  CRPSYHF 10
          C PSY F
Sbjct: 66 CDPSYEF 72


>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)

Query: 6   PSYHF 10
           PS+HF
Sbjct: 296 PSFHF 300


>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1

Query: 2   LRCRPSYHF 10
           LRCRP    
Sbjct: 115 LRCRPGLEL 123


>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)

Query: 2  LRCRPS 7
          LRCRP 
Sbjct: 67 LRCRPE 72


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 5    RPSYH 9
            RP YH
Sbjct: 1030 RPGYH 1034


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 5    RPSYH 9
            RP YH
Sbjct: 1030 RPGYH 1034


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 5    RPSYH 9
            RP YH
Sbjct: 1030 RPGYH 1034


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 5    RPSYH 9
            RP YH
Sbjct: 1030 RPGYH 1034


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 5    RPSYH 9
            RP YH
Sbjct: 1030 RPGYH 1034


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    RPSYH 9
            RP YH
Sbjct: 1032 RPGYH 1036


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    RPSYH 9
            RP YH
Sbjct: 1032 RPGYH 1036


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    RPSYH 9
            RP YH
Sbjct: 1032 RPGYH 1036


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    RPSYH 9
            RP YH
Sbjct: 1032 RPGYH 1036


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 5    RPSYH 9
            RP YH
Sbjct: 1032 RPGYH 1036


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    RPSYH 9
            RP YH
Sbjct: 1032 RPGYH 1036


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    RPSYH 9
            RP YH
Sbjct: 1032 RPGYH 1036


>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40

Query: 2   LRCRP 6
           +RCRP
Sbjct: 431 VRCRP 435


>sp|US08_HCMVM|MEMBRANE glycoprotein US8|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   LRCRPSYHF 10
           + C+P YH 
Sbjct: 149 MWCQPRYHI 157


>sp|US08_HCMVA|UNIQUE short US8 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   LRCRPSYHF 10
           + C+P YH 
Sbjct: 149 MWCQPRYHI 157


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 4   CRPSYHF 10
           C+P  HF
Sbjct: 458 CKPLEHF 464


>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain

Query: 1   SLRCRPSYHF 10
           S++C P Y  
Sbjct: 268 SVKCPPKYEL 277




31|Sequence|151|160|PSYHFIGSLA

>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus

Query: 1   PSYHFIGSLA 10
           P++HF G LA
Sbjct: 295 PAFHFWGQLA 304


>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)

Query: 1   PSYHFIGSL 9
           PS+HF G L
Sbjct: 296 PSFHFWGQL 304


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 1   PSYHFIGSL 9
           PS++F+G L
Sbjct: 627 PSWNFVGDL 635


>sp|NCAP_VSIVC|NUCLEOPROTEIN stomatitis Indiana virus (strain

Query: 1   PSYHFIGSL 9
           P++HF G L
Sbjct: 295 PAFHFWGQL 303


>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain

Query: 1   PSYHFIGSL 9
           P++HF G L
Sbjct: 295 PAFHFWGQL 303


>sp|NCAP_VSIVN|NUCLEOPROTEIN stomatitis Indiana virus (strain

Query: 1   PSYHFIGSL 9
           P++HF G L
Sbjct: 295 PAFHFWGQL 303


>sp|NCAP_VSIVA|NUCLEOPROTEIN stomatitis Indiana virus (strain

Query: 1   PSYHFIGSL 9
           P++HF G L
Sbjct: 295 PAFHFWGQL 303


>sp|NCAP_VSIVS|NUCLEOPROTEIN stomatitis Indiana virus (strain

Query: 1   PSYHFIGSL 9
           P++HF G L
Sbjct: 295 PAFHFWGQL 303


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 4    HFIGSLA 10
            H+IGS+A
Sbjct: 1447 HYIGSIA 1453


>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7

Query: 1   PSYHF 5
           PS+HF
Sbjct: 310 PSHHF 314


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 3   YHFIG 7
           YHF+G
Sbjct: 167 YHFLG 171


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 3   YHFIG 7
           YHF+G
Sbjct: 167 YHFLG 171


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 3   YHFIG 7
           YHF+G
Sbjct: 167 YHFLG 171


>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 4   HFIGSL 9
           HFIG+L
Sbjct: 458 HFIGNL 463


>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)

Query: 4   HFIGSL 9
           HFIG+L
Sbjct: 458 HFIGNL 463


>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant

Query: 4   HFIGSL 9
           HFIG+L
Sbjct: 458 HFIGNL 463


>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63

Query: 3   YHFIGSLA 10
           Y FI SLA
Sbjct: 423 YRFIESLA 430


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 3   YHFIG 7
           YHF+G
Sbjct: 167 YHFLG 171


>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)

Query: 1   PSYHFIGSL 9
           P  HF GSL
Sbjct: 205 PVAHFQGSL 213


>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)

Query: 1   PSYHFIGSL 9
           P  HF GSL
Sbjct: 205 PVAHFQGSL 213




32|Sequence|156|165|IGSLAVADLL

>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  IGSLAVADLL 10
          I +LAVADLL
Sbjct: 72 ICNLAVADLL 81


>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain

Query: 1  IGSLAVADLL 10
          I +LAVADLL
Sbjct: 70 ICNLAVADLL 79


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1    IGSLAVADLL 10
            +GSL+  DLL
Sbjct: 1168 LGSLSYLDLL 1177


>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1  IGSLAVADLL 10
          IGSLAV + +
Sbjct: 24 IGSLAVEEAM 33


>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)

Query: 1  IGSLAVADLL 10
          IGSLA+ + +
Sbjct: 24 IGSLAIGEAM 33


>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)

Query: 1  IGSLAVADLL 10
          IGSLA+ + +
Sbjct: 24 IGSLAIGEAM 33


>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)

Query: 1  IGSLAVADLL 10
          IGSLA+ + +
Sbjct: 24 IGSLAIGEAM 33


>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)

Query: 1  IGSLAVADLL 10
          IGSLA+ + +
Sbjct: 24 IGSLAIGEAM 33


>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)

Query: 1  IGSLAVADLL 10
          IGSLAV + +
Sbjct: 24 IGSLAVEEAM 33


>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P

Query: 1   IGSLAVADLL 10
           +GS  V+D+L
Sbjct: 399 LGSSTVSDML 408


>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)

Query: 1  IGSLAVADLL 10
          IGSLA+ + +
Sbjct: 24 IGSLAIEEAM 33


>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)

Query: 1  IGSLAVADLL 10
          IGSLA+ + +
Sbjct: 24 IGSLAIEEAM 33


>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1  IGSLAVADLL 10
          IGSLA+ + +
Sbjct: 24 IGSLAIEEAM 33


>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)

Query: 1  IGSLAVADLL 10
          IGSLA+ + +
Sbjct: 24 IGSLAIEEAM 33


>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)

Query: 1  IGSLAVADLL 10
          IGSLA+ + +
Sbjct: 24 IGSLAIEEAM 33


>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)

Query: 1  IGSLAVADLL 10
          IGSLA+ + +
Sbjct: 24 IGSLAIEEAM 33


>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)

Query: 1  IGSLAVADLL 10
          IGSLA+ + +
Sbjct: 24 IGSLAIEEAM 33




33|Sequence|161|170|VADLLGSVIF

>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   VADLLGS 7
           +ADLLGS
Sbjct: 456 LADLLGS 462


>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   VADLLGS 7
           +ADLLGS
Sbjct: 462 LADLLGS 468


>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)

Query: 2  ADLLGSVI 9
          AD++GS++
Sbjct: 60 ADIIGSIV 67


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 1    VADLLG 6
            VADLLG
Sbjct: 1525 VADLLG 1530


>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 1    VADLLG 6
            VADLLG
Sbjct: 1525 VADLLG 1530


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 1    VADLLG 6
            VADLLG
Sbjct: 1525 VADLLG 1530


>sp|U150A_HCMVM|UNCHARACTERIZED protein UL150A|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   VADLLGSVI 9
           V +L+GSV+
Sbjct: 199 VGELVGSVV 207


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   VADLLGSVIF 10
           V DL GSV  
Sbjct: 277 VGDLCGSVFL 286


>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)

Query: 1   VADLLGSVIF 10
           V DL GSV  
Sbjct: 277 VGDLCGSVFL 286


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1   VADLLGSVIF 10
           V DL GSV  
Sbjct: 277 VGDLCGSVFL 286


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1   VADLLGSVIF 10
           V DL GSV  
Sbjct: 277 VGDLCGSVFL 286




34|Sequence|166|175|GSVIFVYSFI

>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4

Query: 1   GSVIFVYSFI 10
           G  +F YSFI
Sbjct: 433 GKSLFCYSFI 442


>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)

Query: 1   GSVIFVYS 8
           GS++F YS
Sbjct: 185 GSMVFTYS 192


>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P

Query: 4   IFVYSFI 10
           +F+Y FI
Sbjct: 283 LFIYDFI 289


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 1   GSVIFVYS 8
           GS++F+ S
Sbjct: 866 GSILFIVS 873




35|Sequence|171|180|VYSFIDFHVF

>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)

Query: 3  SFIDFHVF 10
          S +DFHV+
Sbjct: 90 SPLDFHVY 97


Query: 1   VYSFIDFHV 9
           VY F+  HV
Sbjct: 630 VYHFVKKHV 638


>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)

Query: 3  SFIDFHVF 10
          S +DFHV+
Sbjct: 90 SPLDFHVY 97


Query: 1   VYSFIDFHV 9
           VY F+  HV
Sbjct: 630 VYHFVKKHV 638


>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)

Query: 3  SFIDFHVF 10
          S +DFHV+
Sbjct: 90 SPLDFHVY 97


Query: 1   VYSFIDFHV 9
           VY F+  HV
Sbjct: 630 VYHFVKKHV 638


>sp|A28_MCV1|ENVELOPE protein A28 homolog|Molluscum contagiosum virus subtype 1

Query: 3  SFIDFHVF 10
          S+ID HVF
Sbjct: 52 SYIDKHVF 59


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 3   SFIDFH 8
           SF+D+H
Sbjct: 677 SFLDYH 682


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 3   SFIDFHV 9
           +F+D+H+
Sbjct: 677 TFLDYHM 683


>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)

Query: 3   SFIDFHV 9
           SF+D H+
Sbjct: 433 SFVDVHL 439


>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)

Query: 1   VYSFIDFHV 9
           + S +DFHV
Sbjct: 140 ILSILDFHV 148


>sp|VE6_HPV32|PROTEIN E6|Human papillomavirus type 32

Query: 2  YSFIDFHV 9
          Y F D HV
Sbjct: 46 YHFKDLHV 53


>sp|B17_VARV|PROTEIN B17|Variola virus

Query: 1   VYSFIDFH 8
           VY+F D H
Sbjct: 189 VYTFPDIH 196


>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   VYSFIDFH 8
           VY+F D H
Sbjct: 189 VYTFPDIH 196




36|Sequence|176|185|DFHVFHRKDS

>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1   DFHVFHRKD 9
           D HVF++KD
Sbjct: 868 DEHVFYKKD 876


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1   DFHVFHRKD 9
           D HVF++KD
Sbjct: 868 DEHVFYKKD 876


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2    FHVFHRKD 9
            FH  H KD
Sbjct: 3223 FHELHLKD 3230


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3289 FHRRD 3293


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3289 FHRRD 3293


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3285 FHRRD 3289


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3270 FHRRD 3274


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3300 FHRRD 3304


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3297 FHRRD 3301


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3301 FHRRD 3305


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3292 FHRRD 3296


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3279 FHRRD 3283


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3277 FHRRD 3281


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3279 FHRRD 3283


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3296 FHRRD 3300


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3292 FHRRD 3296


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3280 FHRRD 3284


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3279 FHRRD 3283


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3301 FHRRD 3305


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3279 FHRRD 3283


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3279 FHRRD 3283


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3279 FHRRD 3283


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3300 FHRRD 3304


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3276 FHRRD 3280


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3281 FHRRD 3285


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3299 FHRRD 3303


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3299 FHRRD 3303


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3299 FHRRD 3303


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3299 FHRRD 3303


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3290 FHRRD 3294


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3255 FHRRD 3259


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3255 FHRRD 3259


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3255 FHRRD 3259


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3255 FHRRD 3259


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3255 FHRRD 3259


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3257 FHRRD 3261


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3257 FHRRD 3261


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3257 FHRRD 3261


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3257 FHRRD 3261


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3257 FHRRD 3261


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3258 FHRRD 3262


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3255 FHRRD 3259


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3258 FHRRD 3262


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3258 FHRRD 3262


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3258 FHRRD 3262


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3258 FHRRD 3262


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3258 FHRRD 3262


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3259 FHRRD 3263


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3258 FHRRD 3262


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3259 FHRRD 3263


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3295 FHRRD 3299


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3259 FHRRD 3263


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 5    FHRKD 9
            FHR+D
Sbjct: 3281 FHRRD 3285


>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United

Query: 2   FHVFHRKDS 10
           FHV +RK +
Sbjct: 336 FHVGYRKQA 344




37|Sequence|181|190|HRKDSRNVFL

>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1   HRKDSRNVFL 10
           HR+D R+V L
Sbjct: 200 HRRDKRSVAL 209


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1   HRKDSRNVFL 10
           HR+D R+V L
Sbjct: 200 HRRDKRSVAL 209


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1   HRKDSRNVFL 10
           HR+D R+V L
Sbjct: 200 HRRDKRSVAL 209


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1   HRKDSRNVFL 10
           HR+D R+V L
Sbjct: 200 HRRDKRSVAL 209


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1   HRKDSRNVFL 10
           HR+D R+V L
Sbjct: 200 HRRDKRSVAL 209


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1   HRKDSRNVFL 10
           HR+D R+V L
Sbjct: 200 HRRDKRSVAL 209


>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1   HRKDSRNVFL 10
           HR+D R+V L
Sbjct: 200 HRRDKRSVAL 209


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1   HRKDSRNVFL 10
           HR+D R+V L
Sbjct: 200 HRRDKRSVAL 209


>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1   HRKDSRNVFL 10
           HR+D R+V L
Sbjct: 200 HRRDKRSVAL 209


>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   HRKDSRNV 8
           HR  S+NV
Sbjct: 791 HRASSKNV 798


>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   HRKDSRNVFL 10
           H++ +R VF+
Sbjct: 497 HQRHTRGVFV 506


>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   HRKDSRNV 8
           H KD+R +
Sbjct: 285 HEKDNRTI 292


>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   HRKDSRNV 8
           H KD+R +
Sbjct: 284 HSKDNRTI 291




38|Sequence|186|195|RNVFLFKLGG

>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate

Query: 4   FLFKLG 9
           FLF+LG
Sbjct: 330 FLFELG 335


>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain

Query: 4   FLFKLG 9
           FLF+LG
Sbjct: 330 FLFELG 335




39|Sequence|191|200|FKLGGVTASF

>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1   FKLGGVTAS 9
           F+L G+TAS
Sbjct: 150 FRLNGLTAS 158


>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1   FKLGGVTAS 9
           F+L G+TAS
Sbjct: 150 FRLNGLTAS 158


>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)

Query: 2   KLGGVTASF 10
           K+G VTA F
Sbjct: 334 KIGKVTARF 342


>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1   FKLGGVTAS 9
           F+L G+TA+
Sbjct: 150 FRLNGLTAN 158


>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1   FKLGGVTAS 9
           F+L G+T S
Sbjct: 150 FRLNGLTTS 158


>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1   FKLGGVTAS 9
           F+L G+T S
Sbjct: 150 FRLNGLTTS 158


>sp|US32_HCMVM|PROTEIN US32|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   FKLGGV 6
           F+LGGV
Sbjct: 168 FQLGGV 173


>sp|US32_HCMVA|UNCHARACTERIZED protein HHRF7|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   FKLGGV 6
           F+LGGV
Sbjct: 168 FQLGGV 173


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1    FKLGGVT 7
             KLGG+T
Sbjct: 2181 LKLGGMT 2187




40|Sequence|196|205|VTASFTASVG

>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 2   TASFTAS 8
           TASFT S
Sbjct: 442 TASFTVS 448


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 2   TASFTAS 8
           TASFT S
Sbjct: 442 TASFTVS 448




41|Sequence|201|210|TASVGSLFLT

>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3   SVGSLFL 9
           S+GSLFL
Sbjct: 125 SLGSLFL 131


>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63

Query: 1   TASVGS 6
           TASVGS
Sbjct: 460 TASVGS 465




42|Sequence|206|215|SLFLTAIDRY

>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 3    FLTAIDRY 10
            +LT +DRY
Sbjct: 3393 YLTVMDRY 3400


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 3    FLTAIDRY 10
            +LT +DRY
Sbjct: 3392 YLTVMDRY 3399


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 3    FLTAIDRY 10
            +LT +DRY
Sbjct: 3393 YLTVMDRY 3400


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3    FLTAIDRY 10
            +LT +DRY
Sbjct: 3392 YLTVMDRY 3399


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 3    FLTAIDRY 10
            +LT +DRY
Sbjct: 3392 YLTVMDRY 3399


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 3    FLTAIDRY 10
            +LT +DRY
Sbjct: 3393 YLTVMDRY 3400


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3    FLTAIDRY 10
            +LT +DRY
Sbjct: 3392 YLTVMDRY 3399


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 3    FLTAIDRY 10
            +LT +DRY
Sbjct: 3392 YLTVMDRY 3399


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 3    FLTAIDRY 10
            +LT +DRY
Sbjct: 3392 YLTVMDRY 3399




43|Sequence|211|220|AIDRYISIHR

>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 3    DRYISIHR 10
            DRY S+H+
Sbjct: 6166 DRYCSVHQ 6173


>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4  RYISIHR 10
          RYI+ HR
Sbjct: 4  RYITFHR 10


>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)

Query: 1  AIDRYIS 7
          A+DRY+S
Sbjct: 27 ALDRYLS 33


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 2    IDRYISIH 9
            IDR  SIH
Sbjct: 1170 IDRATSIH 1177


>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4  RYISIHR 10
          RYI+ HR
Sbjct: 4  RYITFHR 10


>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse

Query: 3    DRYISIH 9
            D+YI++H
Sbjct: 1526 DKYINLH 1532


>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United

Query: 3    DRYISIH 9
            D+YI++H
Sbjct: 1526 DKYINLH 1532


>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain AD169)

Query: 1   AIDRYISIHR 10
           A DRY  +H+
Sbjct: 126 AADRYRVLHK 135


>sp|DPOL_VARV|DNA polymerase|Variola virus

Query: 4   RYISIH 9
           RYI++H
Sbjct: 594 RYITVH 599


>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 4   RYISIH 9
           RYI++H
Sbjct: 594 RYITVH 599


>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4   RYISIH 9
           RYI++H
Sbjct: 595 RYITVH 600


>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)

Query: 4   RYISIH 9
           RYI++H
Sbjct: 595 RYITVH 600


>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)

Query: 4   RYISIH 9
           RYI++H
Sbjct: 595 RYITVH 600


>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)

Query: 1   AIDRYISIHR 10
           A DRY  +H+
Sbjct: 127 AADRYRVLHK 136


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3    DRYISIHR 10
            D Y S+H+
Sbjct: 6157 DLYCSVHK 6164


>sp|US28_HCMVT|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain Towne)

Query: 1   AIDRYISI 8
           A+DRY +I
Sbjct: 126 ALDRYYAI 133


>sp|US28_HCMVA|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain AD169)

Query: 1   AIDRYISI 8
           A+DRY +I
Sbjct: 126 ALDRYYAI 133


>sp|US28_HCMVM|ENVELOPE protein US28|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   AIDRYISI 8
           A+DRY +I
Sbjct: 126 ALDRYYAI 133




44|Sequence|216|225|ISIHRPLAYK

>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)

Query: 2  SIHRPLA 8
          S+HRP A
Sbjct: 51 SVHRPTA 57


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 3    IHRPLAYK 10
            + RPL YK
Sbjct: 1446 VKRPLLYK 1453


>sp|VP2_POVWU|MINOR capsid protein VP2|WU polyomavirus (WUPyV)

Query: 2   SIHRPL 7
           SIH+PL
Sbjct: 132 SIHKPL 137


>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1   ISIHRPLAYK 10
           I+ HR  AYK
Sbjct: 158 ITAHRLQAYK 167


>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973

Query: 2   SIHRPLAYK 10
           +IH P  YK
Sbjct: 108 TIHYPKVYK 116


>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea

Query: 2   SIHRPLAYK 10
           +IH P  YK
Sbjct: 100 TIHYPKVYK 108


>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 2   SIHRPLAYK 10
           +IH P  YK
Sbjct: 108 TIHYPKIYK 116


>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 2   SIHRPLAYK 10
           +IH P  YK
Sbjct: 108 TIHYPKIYK 116


>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 2   SIHRPLAYK 10
           +IH P  YK
Sbjct: 108 TIHYPKIYK 116


>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2   SIHRPLAYK 10
           +IH P  YK
Sbjct: 108 TIHYPKIYK 116


>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New

Query: 2   SIHRPLAYK 10
           +IH P  YK
Sbjct: 108 TIHYPKIYK 116


>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain

Query: 1    ISIHRPL 7
            I +HRP+
Sbjct: 995  IQVHRPV 1001


>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 102 TVHYPKVYK 110


>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 101 TVHYPKVYK 109


>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57

Query: 1   ISIHRP 6
           +S+HRP
Sbjct: 282 VSLHRP 287


>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 AVHYPKVYK 116


>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 AVHYPKVYK 116


>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 AVHYPKVYK 116


>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 107 AVHYPKVYK 115


>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 AVHYPKVYK 116


>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996

Query: 2   SIHRPLAYK 10
           ++H P  YK
Sbjct: 108 TVHYPKVYK 116


>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   IHRPLAYK 10
           IH P+A++
Sbjct: 563 IHDPVAFR 570


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 1   ISIHRPLAY 9
           + IHR L Y
Sbjct: 983 VVIHRGLVY 991




45|Sequence|221|230|PLAYKRIVTR

>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1   PLAYKRIVTR 10
           P+AY++++ R
Sbjct: 115 PVAYRKVLLR 124


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1   PLAYKRIVTR 10
           P+AY++++ R
Sbjct: 115 PVAYRKVLLR 124


>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain

Query: 1   PLAYKRIV 8
           PL YK I+
Sbjct: 223 PLTYKHII 230


>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain

Query: 1   PLAYKRIV 8
           PL YK I+
Sbjct: 223 PLTYKHII 230


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 3   AYKRIV 8
           AYKR+V
Sbjct: 126 AYKRVV 131


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   LAYKRI 7
           LAYKR+
Sbjct: 566 LAYKRL 571


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 2   LAYKRI 7
           LAYKR+
Sbjct: 566 LAYKRL 571




46|Sequence|226|235|RIVTRPKAVV

>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   IVTRPKAV 9
           IVTRP  V
Sbjct: 792 IVTRPATV 799


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 2   IVTRPKAV 9
           IVTRP  V
Sbjct: 883 IVTRPPTV 890


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3    VTRPKAVV 10
            VT+PK V+
Sbjct: 1502 VTKPKQVI 1509


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3    VTRPKAVV 10
            VT+PK V+
Sbjct: 1502 VTKPKQVI 1509


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3    VTRPKAVV 10
            VT+PK V+
Sbjct: 1502 VTKPKQVI 1509


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3    VTRPKAVV 10
            VT+PK V+
Sbjct: 1502 VTKPKQVI 1509


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3    VTRPKAVV 10
            VT+PK V+
Sbjct: 1502 VTKPKQVI 1509


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3    VTRPKAVV 10
            VT+PK V+
Sbjct: 1336 VTKPKQVI 1343


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3    VTRPKAVV 10
            VT+PK V+
Sbjct: 1502 VTKPKQVI 1509


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3    VTRPKAVV 10
            VT+PK V+
Sbjct: 1502 VTKPKQVI 1509


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3    VTRPKAVV 10
            VT+PK V+
Sbjct: 1500 VTKPKQVI 1507


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3    VTRPKAVV 10
            VT+PK V+
Sbjct: 1502 VTKPKQVI 1509


>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)

Query: 2   IVTRPKAVV 10
           IVT+PK+ +
Sbjct: 426 IVTKPKSRI 434


>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)

Query: 1   RIVTRPKAVV 10
           R+  RP AVV
Sbjct: 599 RLTNRPIAVV 608




47|Sequence|231|240|PKAVVAFCLM

>sp|E1A_ADE41|EARLY E1A protein|Human adenovirus F serotype 41

Query: 1   PKAVVAFCLM 10
           P+A+ A C M
Sbjct: 163 PEAMCALCYM 172


>sp|E1A_ADE40|EARLY E1A protein|Human adenovirus F serotype 40

Query: 1   PKAVVAFCLM 10
           P+A+ A C M
Sbjct: 158 PEAMCALCYM 167


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 3   AVVAFCL 9
           AV+ FCL
Sbjct: 775 AVIPFCL 781


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    PKAVVAFC 8
            PK +VA C
Sbjct: 1184 PKEIVACC 1191


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1   PKAVVAFCL 9
           P A + FCL
Sbjct: 738 PNARIPFCL 746


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1   PKAVVAFCL 9
           P A + FCL
Sbjct: 738 PNARIPFCL 746


>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)

Query: 1   PKAVVAF 7
           P+AV+AF
Sbjct: 184 PQAVLAF 190


>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)

Query: 1   PKAVVAF 7
           P+AV+AF
Sbjct: 184 PQAVLAF 190


>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human

Query: 1   PKAVVAF 7
           P+AV+AF
Sbjct: 184 PQAVLAF 190


>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)

Query: 1   PKAVVAF 7
           P+AV+AF
Sbjct: 184 PQAVLAF 190


>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)

Query: 1   PKAVVAF 7
           P+AV+AF
Sbjct: 184 PQAVLAF 190


>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)

Query: 1   PKAVVAF 7
           P+AV+AF
Sbjct: 184 PQAVLAF 190


>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)

Query: 1   PKAVVAF 7
           P+AV+AF
Sbjct: 185 PQAVLAF 191


>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)

Query: 1   PKAVVAF 7
           P+AV+AF
Sbjct: 185 PQAVLAF 191


>sp|U148A_HCMVM|PROTEIN UL148A|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  KAVVAFCL 9
          + +VAFCL
Sbjct: 37 RQLVAFCL 44


>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   PKAVVAFC 8
           PK V A C
Sbjct: 242 PKVVAATC 249


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 1    PKAVVAFCL 9
            PK   A+C+
Sbjct: 2393 PKTYAAWCM 2401




48|Sequence|236|245|AFCLMWTIAI

>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   CLMWTIAI 10
           CL+W I +
Sbjct: 755 CLVWNILV 762


>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)

Query: 2   FCLMWT 7
           FC +WT
Sbjct: 323 FCCLWT 328


>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)

Query: 2   FCLMWT 7
           FC +WT
Sbjct: 323 FCCLWT 328


>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4   LMWTIAI 10
           L+WT+A+
Sbjct: 210 LLWTVAL 216


>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4   LMWTIAI 10
           L+WT+A+
Sbjct: 210 LLWTVAL 216


>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4   LMWTIAI 10
           L+WT+A+
Sbjct: 210 LLWTVAL 216


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 1   AFCLMWTI 8
           AFC+ W +
Sbjct: 776 AFCVAWHV 783


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1   AFCLMWTI 8
           AFC  W I
Sbjct: 779 AFCAAWHI 786


>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  AFCLMWTIAI 10
          A CL+W + +
Sbjct: 12 AICLLWWLGV 21


>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)

Query: 1  AFCLMWTIAI 10
          A CL+W + +
Sbjct: 12 AICLLWWLGV 21


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 2   FCLMW 6
           FCL W
Sbjct: 726 FCLNW 730


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 2   FCLMW 6
           FCL W
Sbjct: 726 FCLNW 730


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    CLMWT 7
            C MWT
Sbjct: 1076 CKMWT 1080


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    CLMWT 7
            C MWT
Sbjct: 1076 CKMWT 1080


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    CLMWT 7
            C MWT
Sbjct: 1076 CKMWT 1080


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    CLMWT 7
            C MWT
Sbjct: 1076 CKMWT 1080


>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b

Query: 3   CLMWTIA 9
           CL W +A
Sbjct: 234 CLDWVVA 240


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1   AFCLMWTI 8
           AFC  W +
Sbjct: 777 AFCAAWYV 784


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1   AFCLMWTI 8
           AFC  W +
Sbjct: 777 AFCAAWYV 784


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 2   FCLMW 6
           +CL W
Sbjct: 667 YCLQW 671


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 2   FCLMW 6
           +CL W
Sbjct: 667 YCLQW 671


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 2   FCLMW 6
           +CL W
Sbjct: 672 YCLQW 676


>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   AFCLMWTI 8
           A CL W I
Sbjct: 193 AICLTWRI 200


>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)

Query: 3   CLMWTI 8
           CL+W +
Sbjct: 171 CLLWLV 176


>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant

Query: 3   CLMWTI 8
           CL+W +
Sbjct: 171 CLLWLV 176


>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   CLMWTI 8
           CL+W +
Sbjct: 171 CLLWLV 176


>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   AFCLMWTI 8
           A CL W I
Sbjct: 193 AICLTWRI 200




49|Sequence|241|250|WTIAIVIAVL

 ***** No hits found ******


50|Sequence|246|255|VIAVLPLLGW

>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 1    VIAVLPLLG 9
            VIA L LLG
Sbjct: 1070 VIATLTLLG 1078


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1    VIAVLPLL 8
            +IA LPLL
Sbjct: 1074 IIASLPLL 1081


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 1    VIAVLPLL 8
            +IA LPLL
Sbjct: 1047 IIASLPLL 1054


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 1    VIAVLPLL 8
            +IA LPLL
Sbjct: 1052 IIASLPLL 1059


>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)

Query: 1  VIAVLPLLGW 10
            A LPLL W
Sbjct: 75 TTASLPLLRW 84


>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)

Query: 1  VIAVLPLLGW 10
            A LPLL W
Sbjct: 75 TTASLPLLRW 84


>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)

Query: 1  VIAVLPLLGW 10
            A LPLL W
Sbjct: 75 TTASLPLLRW 84




51|Sequence|251|260|PLLGWNCEKL

>sp|NCAP_RVFVZ|NUCLEOPROTEIN valley fever virus (strain

Query: 2   LLGWNCEKL 10
           L GW C+ L
Sbjct: 111 LAGWTCQAL 119


>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)

Query: 1   PLLGWNCEKL 10
           PLLGW  ++L
Sbjct: 254 PLLGWLDDQL 263


>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)

Query: 1   PLLGWNCEKL 10
           P L W+C+ L
Sbjct: 733 PPLVWDCDAL 742


>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)

Query: 1   PLLGWNCEKL 10
           P L W+C+ L
Sbjct: 733 PPLVWDCDGL 742


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 2   LLGWNCEKL 10
           L+G NCE +
Sbjct: 243 LIGMNCEMM 251


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 2   LLGWNCEKL 10
           L+G NCE +
Sbjct: 243 LIGMNCEMM 251


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 2   LLGWNCEKL 10
           L+G NCE +
Sbjct: 243 LIGMNCEMM 251


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   LLGWNCEKL 10
           L+G NCE +
Sbjct: 243 LIGMNCEMM 251


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 2   LLGWNCEKL 10
           L+G NCE +
Sbjct: 243 LIGMNCEMM 251


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 2   LLGWNCEKL 10
           L+G NCE +
Sbjct: 243 LIGMNCEMM 251


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 1   PLLGWNC 7
           PL+G NC
Sbjct: 509 PLVGSNC 515


>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 2   LLGWN 6
           LLGWN
Sbjct: 253 LLGWN 257


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 1   PLLGWNCE 8
           P LG+N E
Sbjct: 629 PFLGYNPE 636


>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2   LLGWNCEK 9
            +GW C+K
Sbjct: 284 FVGWLCKK 291


>sp|NCAP_PTPV|NUCLEOPROTEIN toro phlebovirus

Query: 4   GWNCE 8
           GW C+
Sbjct: 112 GWTCQ 116


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   WNCEKL 10
           WNC K+
Sbjct: 391 WNCGKV 396


>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   LLGWNCEK 9
            +GW C+K
Sbjct: 284 FVGWLCKK 291


>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   LLGWNCEK 9
            +GW C+K
Sbjct: 284 FVGWLCKK 291


>sp|YM2_DHVI1|PUTATIVE uncharacterized protein M2|Dhori virus (strain Indian/1313/61)

Query: 1  PLLGWNCE 8
          PL+G +C+
Sbjct: 8  PLVGRSCQ 15


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   WNCEK 9
           WNC K
Sbjct: 391 WNCGK 395


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   WNCEK 9
           WNC K
Sbjct: 392 WNCGK 396


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   WNCEK 9
           WNC K
Sbjct: 393 WNCGK 397


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   WNCEK 9
           WNC K
Sbjct: 392 WNCGK 396


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   WNCEK 9
           WNC K
Sbjct: 392 WNCGK 396


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 3   LGWNC 7
           + WNC
Sbjct: 487 INWNC 491


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   WNCEK 9
           WNC K
Sbjct: 392 WNCGK 396


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   WNCEK 9
           WNC K
Sbjct: 392 WNCGK 396


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   WNCEK 9
           WNC K
Sbjct: 390 WNCGK 394


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   WNCEK 9
           WNC K
Sbjct: 391 WNCGK 395


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3    LGWNC 7
            L WNC
Sbjct: 6308 LFWNC 6312


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3    LGWNC 7
            L WNC
Sbjct: 6285 LFWNC 6289


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 3    LGWNC 7
            L WNC
Sbjct: 6287 LFWNC 6291


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3    LGWNC 7
            L WNC
Sbjct: 5943 LFWNC 5947


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3    LGWNC 7
            L WNC
Sbjct: 5968 LFWNC 5972


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   WNCEK 9
           WNC K
Sbjct: 390 WNCGK 394


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   WNCEK 9
           WNC K
Sbjct: 392 WNCGK 396


>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2

Query: 5   WNCEKL 10
           WNC K+
Sbjct: 391 WNCGKV 396


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 3   LGWNC 7
           + WNC
Sbjct: 487 INWNC 491


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 3   LGWNC 7
           + WNC
Sbjct: 487 INWNC 491


>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59

Query: 5   WNCEKL 10
           W C+K+
Sbjct: 422 WRCDKI 427




52|Sequence|256|265|NCEKLQSVCS

>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   NCEKLQSVC 9
           NC+  +S+C
Sbjct: 465 NCKTKKSIC 473


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 3    EKLQSV 8
            EKLQSV
Sbjct: 2077 EKLQSV 2082


>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus

Query: 1   NCEKLQSVC 9
           N +K+QS C
Sbjct: 457 NYDKVQSKC 465


>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)

Query: 1   NCEKLQSVC 9
           N +K+QS C
Sbjct: 457 NYDKVQSKC 465


>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain

Query: 1   NCEKLQSVC 9
           N +K+QS C
Sbjct: 457 NYDKVQSKC 465


>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate

Query: 1   NCEKLQSVC 9
           N +K+QS C
Sbjct: 457 NYDKVQSKC 465




53|Sequence|261|270|QSVCSDIFPH

>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 3    VCSDIFPH 10
            +C+D+ PH
Sbjct: 1270 ICADLAPH 1277


>sp|UL79_HHV7J|PROTEIN U52|Human herpesvirus 7 (strain JI)

Query: 1  QSVCSDIFPH 10
          Q+VC+ +F H
Sbjct: 43 QNVCTLMFSH 52


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 1    QSVCSDIF 8
            QSVC + F
Sbjct: 1252 QSVCEEFF 1259


>sp|RP22_VAR67|DNA-DIRECTED RNA polymerase 22 kDa|Variola virus (isolate Human/India/Ind3/1967)

Query: 3   VCSDIFP 9
           V SD+FP
Sbjct: 105 VISDLFP 111


>sp|RP22_VACCC|DNA-DIRECTED RNA polymerase 22 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   VCSDIFP 9
           V SD+FP
Sbjct: 105 VISDLFP 111


>sp|RP22_MONPV|DNA-DIRECTED RNA polymerase 22 kDa|Monkeypox virus (MPXV)

Query: 3   VCSDIFP 9
           V SD+FP
Sbjct: 105 VISDLFP 111


>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 1    QSVCSDIFP 9
            QSV  ++FP
Sbjct: 1100 QSVVEELFP 1108


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 5    SDIFPH 10
            SD+ PH
Sbjct: 1731 SDVLPH 1736


>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain

Query: 1   QSVCSD 6
           QSVC+D
Sbjct: 362 QSVCND 367


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 3    VCSDIF 8
            +CSD+F
Sbjct: 1140 LCSDMF 1145


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 3    VCSDIF 8
            VC DIF
Sbjct: 2611 VCYDIF 2616


>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)

Query: 2   SVCSDIF 8
           S C+D+F
Sbjct: 229 SFCNDVF 235


>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   SVCSDIF 8
           S C+D+F
Sbjct: 229 SFCNDVF 235


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3    VCSDIF 8
            VC DIF
Sbjct: 2611 VCYDIF 2616


>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10

Query: 2   SVCSDIF 8
           S CSD++
Sbjct: 359 SSCSDVY 365


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   QSVCSDIF 8
           + VC+D+F
Sbjct: 236 RRVCADMF 243




54|Sequence|266|275|DIFPHIDETY

>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)

Query: 2   IFPHIDETY 10
           IFPH+ E Y
Sbjct: 581 IFPHLSEKY 589


>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)

Query: 2  IFPHIDETY 10
          IFP I +TY
Sbjct: 54 IFPTIGKTY 62


>sp|CEP1_EBVG|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1  DIFPHI 6
          +IFPH+
Sbjct: 91 NIFPHV 96


>sp|CEP1_EBVB9|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1  DIFPHI 6
          +IFPH+
Sbjct: 91 NIFPHV 96


>sp|CEP1_EBVA8|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1  DIFPHI 6
          +IFPH+
Sbjct: 91 NIFPHV 96


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 2  IFPHIDETY 10
          IFP I +TY
Sbjct: 54 IFPTIGKTY 62


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 1    DIFPH 5
            DIFPH
Sbjct: 1743 DIFPH 1747


>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 3    FPHIDETY 10
            FP++D+T+
Sbjct: 1419 FPNLDDTF 1426


>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)

Query: 2   IFPHID 7
           IFPH++
Sbjct: 395 IFPHVN 400


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1   DIFPHID 7
           ++FPH D
Sbjct: 816 ELFPHND 822


>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)

Query: 2   IFPHIDETY 10
           I  H++ETY
Sbjct: 931 ISQHVNETY 939


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1   DIFPHID 7
           ++FPH D
Sbjct: 816 ELFPHND 822


>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)

Query: 2   IFPHIDETY 10
           I  H++ETY
Sbjct: 647 ISQHVNETY 655


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 2    IFPHIDE 8
            +FP+I+E
Sbjct: 1476 LFPNIEE 1482


>sp|ORF0_VZVO|MEMBRANE protein 0|Varicella-zoster virus (strain Oka vaccine)

Query: 2  IFPHID 7
          +FPH++
Sbjct: 59 LFPHVE 64


>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   IFPHIDETY 10
           I  H++ETY
Sbjct: 931 ISQHVNETY 939


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 2    IFPHIDE 8
            +FP+I+E
Sbjct: 1476 LFPNIEE 1482


>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9

Query: 2   IFPHID 7
           IFPH D
Sbjct: 497 IFPHPD 502


>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   DIFPHIDETY 10
           +IF H  E Y
Sbjct: 294 EIFTHAKENY 303




55|Sequence|271|280|IDETYLMFWI

>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41

Query: 1   IDETYLMFW 9
           ID+  L FW
Sbjct: 487 IDDATLTFW 495


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 2   DETYLMFWI 10
           DE   +FW+
Sbjct: 766 DENQTLFWL 774


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 2   DETYLMFWI 10
           DE   +FW+
Sbjct: 766 DENQTLFWL 774


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 2   DETYLMF 8
           D+TY MF
Sbjct: 152 DKTYYMF 158


>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype

Query: 4  TYLMFW 9
          TY+ FW
Sbjct: 64 TYMSFW 69


>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)

Query: 2   DETYLMFWI 10
           DE   +FW+
Sbjct: 768 DENKTLFWM 776


>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)

Query: 2   DETYLMFWI 10
           DE   +FW+
Sbjct: 768 DENKTLFWM 776


>sp|NSP3_ROT41|NON-STRUCTURAL protein 3|Rotavirus A (isolate

Query: 2   DETYLMF 8
           D T+LMF
Sbjct: 293 DRTFLMF 299


>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   TYLMFWI 10
           +YL FW+
Sbjct: 597 SYLPFWM 603


>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4   TYLMFWI 10
           +YL FW+
Sbjct: 597 SYLPFWM 603


>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   ETYLMFW 9
           E YL+ W
Sbjct: 136 EQYLLVW 142


>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   ETYLMFW 9
           E YL+ W
Sbjct: 136 EQYLLVW 142


>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl

Query: 1   IDETYLMFW 9
           I+  YLM W
Sbjct: 330 INPNYLMAW 338


>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1   IDETYLMFW 9
           I+  YLM W
Sbjct: 330 INPNYLMAW 338


>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P

Query: 4   TYLMF 8
           TYLMF
Sbjct: 467 TYLMF 471


>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong

Query: 4   TYLMFW 9
           T+LM W
Sbjct: 134 THLMIW 139


>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea

Query: 1   IDETYLMFW 9
           I+  YL+ W
Sbjct: 330 INPNYLLVW 338




56|Sequence|276|285|LMFWIGVTSV

>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1   LMFWIGVTS 9
           L+ W+GV+S
Sbjct: 753 LLLWLGVSS 761


>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  LMFWIGVTS 9
          L++W+GV +
Sbjct: 15 LLWWLGVVA 23


>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)

Query: 1  LMFWIGVTS 9
          L++W+GV +
Sbjct: 15 LLWWLGVVA 23


>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)

Query: 1   LMFWIGVTS 9
           L+ W+GV +
Sbjct: 761 LLLWMGVNA 769


>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1   LMFWIGVTS 9
           L+ W+GV +
Sbjct: 761 LLLWMGVNA 769


>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1   LMFWIGVTS 9
           L+ W+GV +
Sbjct: 761 LLLWMGVNA 769


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1   LMFWIGVTS 9
           L+ W+GV +
Sbjct: 761 LLLWMGVNA 769


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1   LMFWIGVTS 9
           L+ W+G+++
Sbjct: 753 LLLWLGISA 761


>sp|MATRX_ISFV|MATRIX protein|Isfahan virus (ISFV)

Query: 4   WIGVTSV 10
           W+G+T V
Sbjct: 176 WLGITDV 182


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1   LMFWIGVTS 9
           L+ W+GV +
Sbjct: 760 LLLWMGVNA 768


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1   LMFWIGVTS 9
           L+ WIG+ S
Sbjct: 740 LLTWIGLNS 748


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1   LMFWIGVTS 9
           L+ WIG+ S
Sbjct: 740 LLTWIGLNS 748


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1   LMFWIGVTS 9
           L+ WIG+ S
Sbjct: 740 LLTWIGLNS 748


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1   LMFWIGVTS 9
           L+ WIG+ S
Sbjct: 740 LLTWIGLNS 748


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1   LMFWIGVTS 9
           L+ WIG+ S
Sbjct: 740 LLTWIGLNS 748


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1   LMFWIGVTS 9
           L+ W+GV +
Sbjct: 760 LLLWMGVNA 768


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 1   LMFWIGVTS 9
           L+ W+GV +
Sbjct: 761 LLLWMGVNA 769


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1   LMFWIGVTS 9
           L+ W+GV +
Sbjct: 761 LLLWMGVNA 769


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1   LMFWIGVTS 9
           L+ W+GV +
Sbjct: 761 LLLWMGVNA 769


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1   LMFWIGVTS 9
           L+ W+GV +
Sbjct: 761 LLLWMGVNA 769


>sp|VCCL3_HHV8P|PROTEIN vCCL3|Human herpesvirus 8 type P

Query: 1  LMFWIGV 7
          L+FW+ V
Sbjct: 14 LLFWVAV 20


>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)

Query: 1   LMFWIGVTS 9
           L+ W+GV +
Sbjct: 689 LLLWMGVNA 697




57|Sequence|281|290|GVTSVLLLFI

 ***** No hits found ******


58|Sequence|286|295|LLLFIVYAYM

>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 2    LLFIVYAYM 10
            LLF  YAYM
Sbjct: 2387 LLFCHYAYM 2395


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 2    LLFIVYAYM 10
            LLF  YAYM
Sbjct: 2390 LLFCHYAYM 2398


>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1  LLLFIVYAYM 10
          LLL  +Y YM
Sbjct: 12 LLLISIYGYM 21


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1    LLLFIVYAYM 10
            LLL   Y YM
Sbjct: 2380 LLLLAHYGYM 2389




59|Sequence|291|300|VYAYMYILWK

>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 4    YMYILWK 10
            YM++ WK
Sbjct: 1219 YMFVKWK 1225


>sp|K81_HHV8P|PROTEIN K8.1|Human herpesvirus 8 type P

Query: 1   VYAYMYILW 9
           +  ++YILW
Sbjct: 193 IRTHLYILW 201


>sp|VE6_HPV13|PROTEIN E6|Human papillomavirus 13

Query: 2  YAYMYILWK 10
          Y  +YI+W+
Sbjct: 48 YKSLYIVWR 56


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 149 YLHTLWK 155


>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 2    YAYMYILWK 10
            YAY   LW+
Sbjct: 2081 YAYSRALWR 2089


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 149 YLHTLWK 155


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 149 YLHTLWK 155


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 3   AYMYILWK 10
           +Y Y +W+
Sbjct: 185 SYFYAMWR 192


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 149 YLHTLWK 155


>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)

Query: 3  AYMYILWK 10
          AY  I+WK
Sbjct: 13 AYQSIIWK 20


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 2    YAY---MYILWK 10
            YA+   MY LWK
Sbjct: 2490 YAFVGVMYNLWK 2501


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 2    YAY---MYILWK 10
            YA+   MY LWK
Sbjct: 2490 YAFVGVMYNLWK 2501


>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 149 YLHTLWK 155


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2    YAY---MYILWK 10
            YA+   MY LWK
Sbjct: 2489 YAFVGVMYNLWK 2500


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 2    YAY---MYILWK 10
            YA+   MY LWK
Sbjct: 2489 YAFVGVMYNLWK 2500


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 2    YAY---MYILWK 10
            YA+   MY LWK
Sbjct: 2490 YAFVGVMYNLWK 2501


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2    YAY---MYILWK 10
            YA+   MY LWK
Sbjct: 2489 YAFVGVMYNLWK 2500


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 2    YAY---MYILWK 10
            YA+   MY LWK
Sbjct: 2489 YAFVGVMYNLWK 2500


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 2    YAY---MYILWK 10
            YA+   MY LWK
Sbjct: 2489 YAFVGVMYNLWK 2500


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 149 YLHTLWK 155


>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 149 YLHTLWK 155


>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 149 YLHTLWK 155


>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 4   YMYILWK 10
           Y++ LWK
Sbjct: 147 YLHTLWK 153


>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate

Query: 4   YMYILWK 10
           Y Y +W+
Sbjct: 185 YFYTMWR 191


Query: 4   YMYILW 9
           YMY +W
Sbjct: 768 YMYRVW 773


>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United

Query: 4   YMYILWK 10
           Y Y +W+
Sbjct: 185 YFYTMWR 191


Query: 4   YMYILW 9
           YMY +W
Sbjct: 768 YMYRVW 773


>sp|E3B14_ADE05|EARLY E3B 14.6 kDa protein|Human adenovirus C serotype 5

Query: 1  VYAYMYILWK 10
          +Y Y+ I WK
Sbjct: 71 IYPYLDIGWK 80


>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13

Query: 4   YMYILW 9
           YM+I W
Sbjct: 259 YMHIQW 264


>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 5  MYILW 9
          +YILW
Sbjct: 33 IYILW 37


>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 5  MYILW 9
          +YILW
Sbjct: 33 IYILW 37


>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 5  MYILW 9
          +YILW
Sbjct: 33 IYILW 37


>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)

Query: 1   VYAYMYIL 8
           +YA+MY L
Sbjct: 218 LYAFMYYL 225


>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   YAYMYILW 9
           Y Y  +LW
Sbjct: 330 YVYEALLW 337


>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   YAYMYILW 9
           Y Y  +LW
Sbjct: 329 YVYEALLW 336


>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2   YAYMYILW 9
           Y Y  +LW
Sbjct: 330 YVYEALLW 337


>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)

Query: 2   YAYMYIL 8
           +AY Y+L
Sbjct: 805 FAYRYVL 811


>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   YAYMYIL 8
           +AY Y+L
Sbjct: 805 FAYRYVL 811


>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   VYAYMYIL 8
           +YA+MY L
Sbjct: 218 LYAFMYYL 225


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 1    VYAYMYIL 8
            +Y Y Y+L
Sbjct: 1461 LYGYKYLL 1468


>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 1    VYAYMYIL 8
            +Y Y Y+L
Sbjct: 1461 LYGYKYLL 1468


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 1    VYAYMYIL 8
            +Y Y Y+L
Sbjct: 1461 LYGYKYLL 1468


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 2    YAYMYILW 9
            Y+Y+ + W
Sbjct: 2419 YSYLQLRW 2426




60|Sequence|296|305|YILWKAHSHA

>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1    YILWKAHS 8
            Y LW+AH+
Sbjct: 1857 YKLWQAHT 1864


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1    YILWKAHS 8
            Y LW+AH+
Sbjct: 1857 YKLWQAHT 1864


>sp|UNG_HHV23|URACIL-DNA glycosylase|Human herpesvirus 2 (strain 333)

Query: 1   YILWKAHSH 9
           ++LW AH+ 
Sbjct: 236 FMLWGAHAQ 244


>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)

Query: 1   YILWKAHSH 9
           ++LW AH+ 
Sbjct: 245 FMLWGAHAQ 253


>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   YILWKAHSH 9
           ++LW AH+ 
Sbjct: 245 FMLWGAHAQ 253


>sp|UNG_HHV2H|URACIL-DNA glycosylase|Human herpesvirus 2 (strain HG52)

Query: 1   YILWKAHSH 9
           ++LW AH+ 
Sbjct: 196 FMLWGAHAQ 204


>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)

Query: 3   LWKAHSH 9
           +W  HSH
Sbjct: 343 MWNYHSH 349


>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   LWKAHSH 9
           +W  HSH
Sbjct: 343 MWNYHSH 349


>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)

Query: 5    KAHSHA 10
            +AHSHA
Sbjct: 1165 EAHSHA 1170


>sp|PG035_VAR67|PROTEIN OPG035|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1  YILWK 5
          YILW+
Sbjct: 8  YILWR 12


>sp|PG035_VACCC|PROTEIN OPG035|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  YILWK 5
          YILW+
Sbjct: 8  YILWR 12


>sp|PG035_MONPV|PROTEIN OPG035|Monkeypox virus (MPXV)

Query: 1  YILWK 5
          YILW+
Sbjct: 8  YILWR 12


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3    LWKAHS 8
            LWK H+
Sbjct: 1382 LWKGHA 1387


>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21

Query: 2  ILWKAH 7
          +LWK H
Sbjct: 77 LLWKDH 82


>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New

Query: 2  ILWKAHS 8
          +LW +HS
Sbjct: 31 LLWMSHS 37


>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New

Query: 2  ILWKAHS 8
          +LW +HS
Sbjct: 31 LLWMSHS 37


>sp|VE6_HPV14|PROTEIN E6|Human papillomavirus 14

Query: 2  ILWKAH 7
          ++WK H
Sbjct: 80 LIWKGH 85


>sp|VE6_HPV12|PROTEIN E6|Human papillomavirus 12

Query: 2  ILWKAH 7
          ++WK H
Sbjct: 61 LIWKGH 66


>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  ILWKAH 7
          +LW AH
Sbjct: 70 LLWHAH 75


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 3    LWKAHS 8
             WK HS
Sbjct: 1512 FWKKHS 1517


>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin)

Query: 2  ILWKAH 7
          +LW AH
Sbjct: 70 LLWHAH 75


>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 3    LWKAHS 8
             WK HS
Sbjct: 1512 FWKKHS 1517


>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 3    LWKAHS 8
             WK HS
Sbjct: 1512 FWKKHS 1517


>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)

Query: 4  WKAHSH 9
          W+ H+H
Sbjct: 75 WRNHAH 80


>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)

Query: 4  WKAHSH 9
          W+ H+H
Sbjct: 75 WRNHAH 80


>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)

Query: 4  WKAHSH 9
          W+ H+H
Sbjct: 75 WRNHAH 80


>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2

Query: 3    LWKAHS 8
             WK HS
Sbjct: 1510 FWKKHS 1515


>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 3    LWKAHS 8
             WK HS
Sbjct: 1526 FWKKHS 1531


>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 3    LWKAHS 8
             WK HS
Sbjct: 1512 FWKKHS 1517


>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 3    LWKAHS 8
             WK HS
Sbjct: 1512 FWKKHS 1517


>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)

Query: 4  WKAHSH 9
          W+ H+H
Sbjct: 75 WRNHAH 80


>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)

Query: 4  WKAHSH 9
          W+ H+H
Sbjct: 75 WRNHAH 80


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 3    LWKAHS 8
             WK HS
Sbjct: 1527 FWKKHS 1532


>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)

Query: 3   LWKAHS 8
           LW AH+
Sbjct: 487 LWSAHN 492


>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 2   ILWKAHSH 9
           ++WK+ SH
Sbjct: 183 LVWKSDSH 190


>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)

Query: 3   LWKAHS 8
           LW AH+
Sbjct: 487 LWSAHN 492


>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 3    LWKAHS 8
             WK HS
Sbjct: 1527 FWKKHS 1532


>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /

Query: 3   LWKAHS 8
           LW AH+
Sbjct: 487 LWSAHN 492


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1   YILWK 5
           YI WK
Sbjct: 189 YIFWK 193


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1   YILWK 5
           YI WK
Sbjct: 189 YIFWK 193


>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19

Query: 2  ILWKAH 7
          ++WK H
Sbjct: 72 LIWKGH 77




61|Sequence|301|310|AHSHAVRMIQ

>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)

Query: 1    AHSHA 5
            AHSHA
Sbjct: 1166 AHSHA 1170


>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)

Query: 1   AHSHAVRM 8
           AH+ A+RM
Sbjct: 343 AHTEALRM 350


>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   AHSHAVRM 8
           AH+ A+RM
Sbjct: 343 AHTEALRM 350




62|Sequence|306|315|VRMIQRGTQK

>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 1    VRMIQRGTQK 10
            +R+I+RG +K
Sbjct: 1493 LRLIRRGARK 1502


>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954

Query: 1   VRMIQRG 7
           VRMI+RG
Sbjct: 194 VRMIKRG 200


>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto

Query: 1   VRMIQRG 7
           VRMI+RG
Sbjct: 194 VRMIKRG 200


>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006

Query: 1   VRMIQRG 7
           VRMI+RG
Sbjct: 194 VRMIKRG 200


>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980

Query: 1   VRMIQRG 7
           VRMI+RG
Sbjct: 194 VRMIKRG 200


>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl

Query: 1   VRMIQRG 7
           VRMI+RG
Sbjct: 194 VRMIKRG 200


>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954

Query: 1   VRMIQRG 7
           VRMI+RG
Sbjct: 194 VRMIKRG 200


>sp|VP2_POVJC|MINOR capsid protein VP2|JC polyomavirus (JCPyV) (JCV)

Query: 4   IQRGTQK 10
           IQR TQK
Sbjct: 181 IQRRTQK 187


>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 4   IQRGTQK 10
           I+RGT+K
Sbjct: 751 IKRGTEK 757


>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 4   IQRGTQK 10
           I+RGT+K
Sbjct: 751 IKRGTEK 757


>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005

Query: 1   VRMIQRG 7
           +RMI+RG
Sbjct: 194 IRMIKRG 200


>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 1   VRMIQRG 7
           +RM++RG
Sbjct: 194 IRMVKRG 200


>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong

Query: 1   VRMIQRG 7
           +RM++RG
Sbjct: 194 IRMVKRG 200




63|Sequence|311|320|RGTQKSIIIH

>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)

Query: 4   QKSIIIH 10
           QKSI+IH
Sbjct: 152 QKSILIH 158


>sp|NEF_HV2UC|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 1   RGTQKSIIIH 10
           RG + S ++H
Sbjct: 169 RGAETSCLVH 178


>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)

Query: 4   QKSIIIH 10
           QK+I+IH
Sbjct: 155 QKNILIH 161


>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)

Query: 4   QKSIIIH 10
           QK+I+IH
Sbjct: 155 QKNILIH 161




64|Sequence|316|325|SIIIHTSEDG

>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    IIIHTSEDG 10
            +++HTSEDG
Sbjct: 2121 VMLHTSEDG 2129


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    IIIHTSEDG 10
            +++HTSE G
Sbjct: 2121 VMLHTSEHG 2129


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    IIIHTSEDG 10
            +++HTSE G
Sbjct: 2121 VMLHTSEHG 2129


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    IIIHTSEDG 10
            +++HTSE G
Sbjct: 2121 VMLHTSEHG 2129


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    IIIHTSEDG 10
            +++HTSE G
Sbjct: 2121 VMLHTSEHG 2129


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    IIIHTSEDG 10
            +++HT+E G
Sbjct: 2121 VMLHTTEKG 2129


>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United

Query: 2   IIIHTSEDG 10
           III+  EDG
Sbjct: 215 IIIYEQEDG 223


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    IIIHTSEDG 10
            +++HT+E G
Sbjct: 2121 VMLHTTERG 2129


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    IIIHTSEDG 10
            +++HT+E G
Sbjct: 2121 VMLHTTERG 2129


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    IIIHTSEDG 10
            +++HT+E G
Sbjct: 2121 VMLHTTERG 2129


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    IIIHTSEDG 10
            +++HT+E G
Sbjct: 2121 VMLHTTERG 2129


>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   SIIIHTSE 8
           S+++HT+E
Sbjct: 477 SMLVHTTE 484


>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   SIIIHTSE 8
           S+++HT+E
Sbjct: 476 SMLVHTTE 483


>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   SIIIHTSE 8
           S+++HT+E
Sbjct: 476 SMLVHTTE 483


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2    IIIHTSEDG 10
            +++H SE G
Sbjct: 2123 VMLHNSEQG 2131


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2    IIIHTSEDG 10
            +++H SE G
Sbjct: 2122 VMLHNSEQG 2130


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2    IIIHTSEDG 10
            +++H SE G
Sbjct: 2123 VMLHNSEQG 2131


>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5   HTSEDG 10
           H SEDG
Sbjct: 178 HDSEDG 183


>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)

Query: 2   IIIHTSED 9
           I +HT+ED
Sbjct: 397 IAMHTTED 404


>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)

Query: 2   IIIHTSED 9
           I +HT+ED
Sbjct: 397 IAMHTTED 404


>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)

Query: 2   IIIHTSED 9
           I +HT+ED
Sbjct: 397 IAMHTTED 404


>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)

Query: 2   IIIHTSED 9
           I +HT+ED
Sbjct: 397 IAMHTTED 404


>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)

Query: 2   IIIHTSED 9
           I +HT+ED
Sbjct: 397 IAMHTTED 404


>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)

Query: 2   IIIHTSED 9
           I +HT+ED
Sbjct: 397 IAMHTTED 404


>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)

Query: 2   IIIHTSED 9
           I +HT+ED
Sbjct: 397 IAMHTTED 404


>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)

Query: 2   IIIHTSED 9
           I +HT+ED
Sbjct: 397 IAMHTTED 404


>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)

Query: 2   IIIHTSED 9
           I +HT+ED
Sbjct: 397 IAMHTTED 404


>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)

Query: 2   IIIHTSED 9
           I +HT+ED
Sbjct: 397 IAMHTTED 404


>sp|E311_ADE05|EARLY E3A 10.5 kDa glycoprotein|Human adenovirus C serotype 5

Query: 2  IIIHTSEDG 10
          I++H + DG
Sbjct: 69 IVLHPNNDG 77


>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)

Query: 2   IIIHTSED 9
           I +HT+ED
Sbjct: 397 IAMHTTED 404


>sp|IR01_HCMVA|UNCHARACTERIZED protein HKLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5   HTSEDG 10
           H SEDG
Sbjct: 178 HDSEDG 183


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    IIHTSEDG 10
            ++HT+E G
Sbjct: 2123 VLHTAEAG 2130


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    IIHTSEDG 10
            ++HT+E G
Sbjct: 2123 VLHTAEAG 2130


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 3    IIHTSEDG 10
            ++HT+E G
Sbjct: 2123 VLHTAEAG 2130


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    IIHTSEDG 10
            ++HT+E G
Sbjct: 2123 VLHTAEAG 2130


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    IIHTSEDG 10
            ++HT+E G
Sbjct: 2123 VLHTAEAG 2130


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    IIHTSEDG 10
            ++HT+E G
Sbjct: 2123 VLHTAEAG 2130


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    IIHTSEDG 10
            ++HT+E G
Sbjct: 2120 VLHTAEAG 2127


>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1   SIIIHTSED 9
           SI I+TS+D
Sbjct: 234 SIKIYTSDD 242


>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49

Query: 1   SIIIHTSE 8
           ++IIHT++
Sbjct: 493 TVIIHTAD 500


>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1   SIIIHTSED 9
           SI I+TS+D
Sbjct: 234 SIKIYTSDD 242


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 3    IIHTSED 9
            ++H SED
Sbjct: 1496 VLHLSED 1502


>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)

Query: 1   SIIIHTSED 9
           SI I+TS+D
Sbjct: 234 SIKIYTSDD 242




65|Sequence|321|330|TSEDGKVQVT

>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   SEDGKVQVT 10
           SE+G +QVT
Sbjct: 125 SENGNLQVT 133


>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   SEDGKVQVT 10
           SE+G +QVT
Sbjct: 125 SENGNLQVT 133


>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)

Query: 1   TSEDGKVQVT 10
           + E+GK+Q+T
Sbjct: 114 SHENGKLQIT 123


>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant

Query: 1   TSEDGKVQVT 10
           + E+GK+Q+T
Sbjct: 114 SHENGKLQIT 123


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 1  TSEDGKVQV 9
          +SE+G +Q+
Sbjct: 35 SSENGSIQI 43


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 1   TSEDGKVQ 8
           T+E GKVQ
Sbjct: 230 TAEAGKVQ 237


>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)

Query: 1   TSEDGKVQV 9
           TS+ G+V+V
Sbjct: 244 TSDSGRVEV 252


>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   TSEDGKVQV 9
           TS+ G+V+V
Sbjct: 244 TSDSGRVEV 252


>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)

Query: 3    EDGKVQV 9
            EDGKV V
Sbjct: 1164 EDGKVTV 1170


>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)

Query: 3    EDGKVQV 9
            EDGKV V
Sbjct: 1164 EDGKVTV 1170


>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)

Query: 1   TSEDGKVQV 9
           TSE G +Q+
Sbjct: 175 TSEYGSIQI 183


>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   EDGKVQVT 10
           EDGK++ T
Sbjct: 154 EDGKIRPT 161


>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)

Query: 3   EDGKVQVT 10
           EDGK++ T
Sbjct: 154 EDGKIRPT 161


>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus

Query: 3   EDGKVQVT 10
           EDGK++ T
Sbjct: 154 EDGKIRPT 161


>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)

Query: 3   EDGKVQVT 10
           EDGK++ T
Sbjct: 154 EDGKIRPT 161


>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)

Query: 3   EDGKVQVT 10
           EDGK++ T
Sbjct: 154 EDGKIRPT 161




66|Sequence|326|335|KVQVTRPDQA

>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 1   KVQVTR 6
           KVQ+TR
Sbjct: 242 KVQITR 247


>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11])

Query: 1   KVQVTR 6
           KVQ+TR
Sbjct: 242 KVQITR 247


>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 1   KVQVTR 6
           KVQ+TR
Sbjct: 242 KVQITR 247


>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 1   KVQVTR 6
           KVQ+TR
Sbjct: 242 KVQITR 247




67|Sequence|331|340|RPDQARMDIR

>sp|VP24_EBOSU|MEMBRANE-ASSOCIATED protein VP24|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2   PDQARMDIR 10
           PD++ MDIR
Sbjct: 204 PDKSAMDIR 212


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 2    PDQARMDI 9
            PD AR+D+
Sbjct: 2965 PDAARLDL 2972


>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7

Query: 2   PDQARM 7
           PDQARM
Sbjct: 370 PDQARM 375


>sp|VL2_HPV6B|MINOR capsid protein L2|Human papillomavirus type 6b

Query: 2   PDQARMDI 9
           PD+A MDI
Sbjct: 272 PDEAFMDI 279


>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13

Query: 2   PDQARMDI 9
           PD+A MDI
Sbjct: 274 PDEAFMDI 281


>sp|VL2_HPV6A|MINOR capsid protein L2|Human papillomavirus type 6a

Query: 2   PDQARMDI 9
           PD+A MDI
Sbjct: 272 PDEAFMDI 279


>sp|VL2_HPV11|MINOR capsid protein L2|Human papillomavirus 11

Query: 2   PDQARMDI 9
           PD+A MDI
Sbjct: 271 PDEAFMDI 278


>sp|VL2_HPV55|MINOR capsid protein L2|Human papillomavirus type 55

Query: 2   PDQARMDI 9
           PD A MDI
Sbjct: 273 PDDAFMDI 280


>sp|VL2_HPV44|MINOR capsid protein L2|Human papillomavirus 44

Query: 2   PDQARMDI 9
           PD A MDI
Sbjct: 273 PDDAFMDI 280


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2  PDQARMDI 9
          PDQ  +DI
Sbjct: 57 PDQVILDI 64


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2  PDQARMDI 9
          PDQ  +DI
Sbjct: 57 PDQVILDI 64




68|Sequence|336|345|RMDIRLAKTL

>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka

Query: 1   RMDIRLAKTL 10
           +MD R+A+ L
Sbjct: 265 KMDSRIARAL 274


>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)

Query: 1   RMDIRLAKTL 10
           +MD R+A+ L
Sbjct: 265 KMDSRIARAL 274




69|Sequence|341|350|LAKTLVLILV

>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   LAKTLVLIL 9
           LAK LVL L
Sbjct: 759 LAKQLVLFL 767


>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   LAKTLVLIL 9
           LAK LVL L
Sbjct: 759 LAKQLVLFL 767


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2    AKTLVLILV 10
            AKT VL++V
Sbjct: 1254 AKTRVLVVV 1262




70|Sequence|346|355|VLILVVLIIC

>sp|PG097_VARV|PROTEIN OPG097|Variola virus

Query: 3   ILVVLIIC 10
           ILVVL IC
Sbjct: 204 ILVVLSIC 211


>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3   ILVVLIIC 10
           ILVVL IC
Sbjct: 204 ILVVLSIC 211


>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   ILVVLIIC 10
           ILVVL IC
Sbjct: 205 ILVVLSIC 212


>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)

Query: 3   ILVVLIIC 10
           ILVVL IC
Sbjct: 199 ILVVLSIC 206


>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 2   LILVVLIIC 10
           L LVV+I+C
Sbjct: 456 LFLVVVIMC 464


>sp|UL138_HCMVM|PROTEIN UL138|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  VLILVVLIIC 10
          +L+L+V I+C
Sbjct: 16 MLVLIVAILC 25


>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)

Query: 1   VLILVVLIIC 10
           +L LV+ +IC
Sbjct: 550 LLCLVIFLIC 559


>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   VLILVVLIIC 10
           +L LV+ +IC
Sbjct: 550 LLCLVIFLIC 559


>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2  LILVVLIIC 10
          LIL +L+IC
Sbjct: 16 LILGMLLIC 24


>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2  LILVVLIIC 10
          LIL +L+IC
Sbjct: 16 LILGMLLIC 24


>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2  LILVVLIIC 10
          LIL ++IIC
Sbjct: 19 LILGLVIIC 27


>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2  LILVVLIIC 10
          LIL ++IIC
Sbjct: 19 LILGLVIIC 27


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2    LILVVLIIC 10
            L LVV +IC
Sbjct: 3440 LTLVVYLIC 3448




71|Sequence|351|360|VLIICWGPLL

>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 5   CWGPL 9
           CWGPL
Sbjct: 508 CWGPL 512


>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5   CWGPL 9
           CWGPL
Sbjct: 508 CWGPL 512


>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)

Query: 5   CWGPL 9
           CWGPL
Sbjct: 507 CWGPL 511


>sp|CAPSD_HBVC1|CAPSID protein|Hepatitis B virus genotype C

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 IVCWGELM 66


>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)

Query: 5  CWGPLL 10
          CW PLL
Sbjct: 83 CWRPLL 88


>sp|CAPSD_HBVF6|CAPSID protein|Hepatitis B virus genotype F2

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)

Query: 5  CWGPLL 10
          CW PLL
Sbjct: 83 CWHPLL 88


>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 71 ILCWGELM 78


>sp|CAPSD_HBVB7|CAPSID protein|Hepatitis B virus genotype B1

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVA3|CAPSID protein|Hepatitis B virus genotype A2

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVH3|CAPSID protein|Hepatitis B virus genotype H

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVF1|CAPSID protein|Hepatitis B virus genotype F2

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVG2|CAPSID protein|Hepatitis B virus genotype G

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 71 ILCWGELM 78


>sp|CAPSD_HBVA4|CAPSID protein|Hepatitis B virus genotype A2

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVD2|CAPSID protein|Hepatitis B virus genotype D

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGDLI 66


>sp|CAPSD_HBVC7|CAPSID protein|Hepatitis B virus genotype C

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVA9|CAPSID protein|Hepatitis B virus genotype A3

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVA5|CAPSID protein|Hepatitis B virus genotype A1

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGKLM 66


>sp|CAPSD_HBVB3|CAPSID protein|Hepatitis B virus genotype B2

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|HBEAG_HBVC1|EXTERNAL core antigen|Hepatitis B virus genotype C

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 IVCWGELM 95


>sp|CAPSD_HBVD7|CAPSID protein|Hepatitis B virus genotype D

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVA6|CAPSID protein|Hepatitis B virus genotype A1

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVA2|CAPSID protein|Hepatitis B virus genotype A2

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVB6|CAPSID protein|Hepatitis B virus genotype B2

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVD6|CAPSID protein|Hepatitis B virus genotype D

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVD3|CAPSID protein|Hepatitis B virus genotype D

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVC0|CAPSID protein|Hepatitis B virus genotype C

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVB4|CAPSID protein|Hepatitis B virus genotype B/C

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVCJ|CAPSID protein|Hepatitis B virus genotype C

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVC5|CAPSID protein|Hepatitis B virus genotype C

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVC4|CAPSID protein|Hepatitis B virus genotype C

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVC3|CAPSID protein|Hepatitis B virus genotype C

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVB2|CAPSID protein|Hepatitis B virus genotype B2

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVD1|CAPSID protein|Hepatitis B virus genotype D

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGDLM 66


>sp|CAPSD_HBVC9|CAPSID protein|Hepatitis B virus genotype C

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C

Query: 3   IICWGPLL 10
           I+CWG L+
Sbjct: 235 ILCWGELM 242


>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)

Query: 2   LIICWGPLL 10
           LI+ W PL+
Sbjct: 370 LILIWQPLI 378


>sp|CAPSD_HBVB1|CAPSID protein|Hepatitis B virus genotype B1

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGELM 66


>sp|CAPSD_HBVD4|CAPSID protein|Hepatitis B virus genotype D

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 59 ILCWGDLI 66


>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|HBEAG_HBVF6|EXTERNAL core antigen|Hepatitis B virus genotype F2

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)

Query: 2   LIICWGPLL 10
           LI+ W PL+
Sbjct: 373 LILIWQPLV 381


>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   LIICWGPLL 10
           LI+ W PL+
Sbjct: 373 LILIWQPLV 381


>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)

Query: 2   LIICWGPLL 10
           LI+ W PL+
Sbjct: 373 LILIWQPLV 381


>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|HBEAG_HBVF1|EXTERNAL core antigen|Hepatitis B virus genotype F2

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|HBEAG_HBVC7|EXTERNAL core antigen|Hepatitis B virus genotype C

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|HBEAG_HBVD6|EXTERNAL core antigen|Hepatitis B virus genotype D

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|HBEAG_HBVC0|EXTERNAL core antigen|Hepatitis B virus genotype C

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|HBEAG_HBVB4|EXTERNAL core antigen|Hepatitis B virus genotype B/C

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50

Query: 4   ICWG 7
           ICWG
Sbjct: 331 ICWG 334


>sp|HBEAG_HBVD3|EXTERNAL core antigen|Hepatitis B virus genotype D

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|HBEAG_HBVC3|EXTERNAL core antigen|Hepatitis B virus genotype C

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|HBEAG_HBVB2|EXTERNAL core antigen|Hepatitis B virus genotype B2

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|HBEAG_HBVA5|EXTERNAL core antigen|Hepatitis B virus genotype A1

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGKLM 95


>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|HBEAG_HBVB1|EXTERNAL core antigen|Hepatitis B virus genotype B1

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|HBEAG_HBVCJ|EXTERNAL core antigen|Hepatitis B virus genotype C

Query: 3  IICWGPLL 10
          I+CWG L+
Sbjct: 88 ILCWGELM 95


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 6    WGPLL 10
            WGP++
Sbjct: 1186 WGPMM 1190


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 6    WGPLL 10
            WGP++
Sbjct: 1197 WGPMM 1201


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 6    WGPLL 10
            WGP++
Sbjct: 1194 WGPMM 1198


>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 6  WGPLL 10
          WGPL+
Sbjct: 17 WGPLI 21


>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 6  WGPLL 10
          WGPL+
Sbjct: 17 WGPLI 21


>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 6  WGPLL 10
          WGPL+
Sbjct: 17 WGPLI 21


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 5    CWGPLL 10
            C+GPL+
Sbjct: 4690 CFGPLV 4695


>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27

Query: 2  LIICWGP 8
          L + WGP
Sbjct: 63 LFLVWGP 69


>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   ICWGPLL 10
           +CW P +
Sbjct: 253 VCWAPCM 259


>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate

Query: 3  IICWGPL 9
          IIC GP+
Sbjct: 24 IICAGPI 30


>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5   CWGPLL 10
           C GPLL
Sbjct: 119 CRGPLL 124


>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5   CWGPLL 10
           C GPLL
Sbjct: 119 CRGPLL 124


>sp|UL120_HCMVA|UNCHARACTERIZED protein UL120|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   IICWG 7
           + CWG
Sbjct: 116 VTCWG 120


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 5    CWGPLL 10
            C+GPL+
Sbjct: 4778 CFGPLV 4783


>sp|UL120_HCMVM|MEMBRANE protein UL120|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   IICWG 7
           + CWG
Sbjct: 117 VTCWG 121


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 5    CWGPLL 10
            C+GPL+
Sbjct: 4748 CFGPLV 4753


>sp|CAPSD_HBVA8|CAPSID protein|Hepatitis B virus genotype A3

Query: 3  IICWG 7
          I+CWG
Sbjct: 59 ILCWG 63


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 5    CWGPLL 10
            C+GPL+
Sbjct: 4728 CFGPLV 4733


>sp|VE6_HPV58|PROTEIN E6|Human papillomavirus 58

Query: 4   ICWGP 8
           +CW P
Sbjct: 138 VCWRP 142


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 4    ICWGPLL 10
            + W PLL
Sbjct: 1147 LSWAPLL 1153


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 4    ICWGPLL 10
            + W PLL
Sbjct: 1147 LSWAPLL 1153


>sp|ORF2_TTVA1|UNCHARACTERIZED ORF2 protein|Torque teno virus 1 (isolate

Query: 1  VLIICWGP 8
          +LI+ W P
Sbjct: 79 LLIVMWTP 86


>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)

Query: 2   LIICWGP 8
           L + WGP
Sbjct: 132 LRLAWGP 138


>sp|HBEAG_HBVA8|EXTERNAL core antigen|Hepatitis B virus genotype A3

Query: 3  IICWG 7
          I+CWG
Sbjct: 88 ILCWG 92




72|Sequence|356|365|WGPLLAIMVY

>sp|VP40_MABVM|MATRIX protein VP40|Lake Victoria marburgvirus (strain Musoke-80)

Query: 2   GPLLAI 7
           GPLLAI
Sbjct: 223 GPLLAI 228


>sp|VP40_MABVA|MATRIX protein VP40|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2   GPLLAI 7
           GPLLAI
Sbjct: 223 GPLLAI 228


>sp|VP40_MABVO|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2   GPLLAI 7
           GPLLAI
Sbjct: 223 GPLLAI 228


>sp|VP40_MABVR|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ravn-87)

Query: 2   GPLLAI 7
           GPLLAI
Sbjct: 223 GPLLAI 228


>sp|VP40_MABVP|MATRIX protein VP40|Lake Victoria marburgvirus (strain Popp-67)

Query: 2   GPLLAI 7
           GPLLAI
Sbjct: 223 GPLLAI 228


>sp|ARBH_HHV8P|APOPTOSIS regulator Bcl-2 homolog|Human herpesvirus 8 type P

Query: 1  WGPLLAIMVY 10
          WG  LAI+ +
Sbjct: 84 WGRALAILTF 93


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1   WGPLLAIMVY 10
           WG LLA+  +
Sbjct: 353 WGILLAVAYF 362


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1   WGPLLAIMVY 10
           WG LLA+  +
Sbjct: 353 WGILLAVAYF 362


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1   WGPLLAIMV 9
           WG LLA  V
Sbjct: 936 WGQLLASAV 944


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1   WGPLLAIMV 9
           WG LLA  V
Sbjct: 936 WGQLLASAV 944


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1   WGPLLAIMV 9
           WG LLA  V
Sbjct: 936 WGQLLASAV 944




73|Sequence|361|370|AIMVYDVFGK

>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 3   MVYDVFGK 10
           ++YD FGK
Sbjct: 258 VIYDSFGK 265


>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5   YDVFGK 10
           YD FGK
Sbjct: 451 YDYFGK 456


>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5   YDVFGK 10
           YD FGK
Sbjct: 451 YDYFGK 456


>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)

Query: 3   MVYDVFGK 10
           ++YD +GK
Sbjct: 245 VIYDSYGK 252


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5    YDVFG 9
            YD+FG
Sbjct: 1151 YDIFG 1155


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 5    YDVFG 9
            YD+FG
Sbjct: 1151 YDIFG 1155


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 5    YDVFG 9
            YD+FG
Sbjct: 1151 YDIFG 1155


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)

Query: 5    YDVFG 9
            YD+FG
Sbjct: 1151 YDIFG 1155


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 5    YDVFG 9
            YD+FG
Sbjct: 1151 YDIFG 1155


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    AIMVYDVFG 9
            A + YD+FG
Sbjct: 2609 AGVCYDIFG 2617


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1    AIMVYDVFG 9
            A + YD+FG
Sbjct: 2609 AGVCYDIFG 2617




74|Sequence|366|375|DVFGKMNKLI

>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985

Query: 2   VFGKMNKLI 10
           + GK+N+LI
Sbjct: 390 ITGKLNRLI 398


>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985

Query: 2   VFGKMNKLI 10
           + GK+N+LI
Sbjct: 390 ITGKLNRLI 398


>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980

Query: 2   VFGKMNKLI 10
           + GK+N+LI
Sbjct: 387 ITGKLNRLI 395


>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge

Query: 2   VFGKMNKLI 10
           + GK+N+LI
Sbjct: 390 ITGKLNRLI 398


>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966

Query: 2   VFGKMNKLI 10
           + GK+N+LI
Sbjct: 397 ITGKLNRLI 405


>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao

Query: 2   VFGKMNKLI 10
           + GK+N+LI
Sbjct: 397 ITGKLNRLI 405


>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973

Query: 2   VFGKMNKLI 10
           + GK+N+LI
Sbjct: 397 ITGKLNRLI 405


>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964

Query: 2   VFGKMNKLI 10
           + GK+N+LI
Sbjct: 397 ITGKLNRLI 405


>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963

Query: 2   VFGKMNKLI 10
           + GK+N+LI
Sbjct: 397 ITGKLNRLI 405


>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964

Query: 2   VFGKMNKLI 10
           + GK+N+LI
Sbjct: 397 ITGKLNRLI 405


>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New

Query: 2   VFGKMNKLI 10
           + GK+N+LI
Sbjct: 397 ITGKLNRLI 405


>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956

Query: 2   VFGKMNKLI 10
           + GK+N+LI
Sbjct: 397 ITGKLNRLI 405


>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973

Query: 2   VFGKMNKLI 10
           + GK+N+LI
Sbjct: 397 ITGKLNRLI 405


>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972

Query: 2   VFGKMNKLI 10
           + GK+N+LI
Sbjct: 397 ITGKLNRLI 405


>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989

Query: 4   GKMNKLI 10
           GK+N+LI
Sbjct: 395 GKLNRLI 401


>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986

Query: 4   GKMNKLI 10
           GK+N+LI
Sbjct: 379 GKLNRLI 385


>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong

Query: 4   GKMNKLI 10
           GK+N+LI
Sbjct: 395 GKLNRLI 401


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 2   VFGKMNKL 9
           VFG MN +
Sbjct: 535 VFGTMNSM 542


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 2   VFGKMNKL 9
           VFG MN +
Sbjct: 535 VFGTMNSM 542


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 2   VFGKMNKL 9
           VFG MN +
Sbjct: 535 VFGTMNSM 542


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 3    FGKMNK 8
            FGK+NK
Sbjct: 1130 FGKINK 1135




75|Sequence|371|380|MNKLIKTVFA

>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2    NKLIKTVF 9
            NKLI T+F
Sbjct: 999  NKLINTLF 1006


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 2    NKLIKTVF 9
            NKLI T+F
Sbjct: 999  NKLINTLF 1006


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 2    NKLIKTVF 9
            NKLI T+F
Sbjct: 998  NKLINTLF 1005


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2    NKLIKTVF 9
            NKLI T+F
Sbjct: 998  NKLINTLF 1005


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2    NKLIKTVF 9
            NKLI T+F
Sbjct: 998  NKLINTLF 1005


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2    NKLIKTVF 9
            NKLI T+F
Sbjct: 998  NKLINTLF 1005


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 4   LIKTVFA 10
           LIKT+F 
Sbjct: 671 LIKTIFG 677




76|Sequence|376|385|KTVFAFCSML

>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)

Query: 2   TVFAFCSML 10
           ++FA C ML
Sbjct: 713 SIFASCYML 721


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 2   TVFAFCSML 10
           ++FA C ML
Sbjct: 713 SIFASCYML 721


>sp|PG076_VACCC|ENTRY-FUSION complex protein OPG076|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4  FAFCSML 10
          FAFCS L
Sbjct: 11 FAFCSWL 17


>sp|PG076_VAR67|ENTRY-FUSION complex protein OPG076|Variola virus (isolate

Query: 4  FAFCSML 10
          FAFCS L
Sbjct: 11 FAFCSWL 17


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 4   FAFCSM 9
           F+FCS+
Sbjct: 552 FSFCSL 557


>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 4   FAFCSM 9
           F+FCS+
Sbjct: 229 FSFCSL 234


>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)

Query: 1  KTVFAFCS 8
          KT F+ CS
Sbjct: 39 KTAFSVCS 46


>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant

Query: 1  KTVFAFCS 8
          KT F+ CS
Sbjct: 39 KTAFSVCS 46


>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)

Query: 1  KTVFAFCS 8
          KT F+ CS
Sbjct: 39 KTAFSVCS 46




77|Sequence|381|390|FCSMLCLLNS

>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 2   CSMLCLLNS 10
           CS+LC +++
Sbjct: 538 CSILCFVSA 546


>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)

Query: 2   CSMLCLLNS 10
           C MLCL ++
Sbjct: 540 CYMLCLASA 548


>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)

Query: 1   FCSMLCLLN 9
           FC  LCL N
Sbjct: 385 FCDPLCLAN 393


>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P

Query: 1   FCSMLCLLNS 10
           FC  LC LN+
Sbjct: 368 FCDPLCALNA 377


>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   FCSMLCLLN 9
           FC  LCL N
Sbjct: 385 FCDPLCLAN 393


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 2   CSMLCLLNS 10
           C M+C++++
Sbjct: 539 CYMMCMVSA 547


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 1    FCSMLCLL 8
             C+++CL+
Sbjct: 2164 LCALVCLM 2171


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 2   CSMLCLLNS 10
           CS++C +++
Sbjct: 539 CSIMCFVSA 547


>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   CSMLCL 7
           C++LCL
Sbjct: 231 CAVLCL 236


>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)

Query: 2   CSMLCL 7
           C++LCL
Sbjct: 239 CAVLCL 244


>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)

Query: 2   CSMLCL 7
           C++LCL
Sbjct: 234 CAVLCL 239


>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 2  CSMLCLLNS 10
          CS  CLL +
Sbjct: 14 CSTWCLLEA 22


>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   FCSMLCLLN 9
           FC  LC +N
Sbjct: 429 FCDPLCAIN 437


>sp|VU26_HHV7J|PROTEIN U26|Human herpesvirus 7 (strain JI)

Query: 2   CSMLCLL 8
           CS+LCLL
Sbjct: 230 CSILCLL 236


>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   FCSMLCLLNS 10
           FC +LC L+ 
Sbjct: 486 FCDLLCALSE 495


>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   FCSMLC 6
           FC +LC
Sbjct: 308 FCRVLC 313


>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   FCSMLC 6
           FC +LC
Sbjct: 308 FCRVLC 313


>sp|MATRX_HRSVB|MATRIX protein|Human respiratory syncytial virus B

Query: 2   CSMLCL 7
           CS+ CL
Sbjct: 115 CSLTCL 120


>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 1   FCSMLC 6
           FC  LC
Sbjct: 213 FCQKLC 218


>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)

Query: 1   FCSMLC 6
           FC  LC
Sbjct: 213 FCQKLC 218


>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)

Query: 2   CSMLCLLNS 10
           C++ CL +S
Sbjct: 489 CTLACLADS 497


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 2    CSMLCL 7
            CS +CL
Sbjct: 1881 CSWMCL 1886


>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)

Query: 1   FCSMLCLLN 9
           FC  LC+ N
Sbjct: 386 FCDPLCIAN 394


>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3

Query: 2   CSMLCL 7
           CS++CL
Sbjct: 149 CSVVCL 154


>sp|MATRX_HRSVA|MATRIX protein|Human respiratory syncytial virus A

Query: 2   CSMLCL 7
           CS+ CL
Sbjct: 115 CSLTCL 120


>sp|MATRX_HRSS2|MATRIX protein|Human respiratory syncytial virus A

Query: 2   CSMLCL 7
           CS+ CL
Sbjct: 115 CSLTCL 120




78|Sequence|386|395|CLLNSTVNPI

>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)

Query: 1   CLLNSTVNP 9
           CL+N  +NP
Sbjct: 221 CLINHGINP 229


>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain

Query: 1   CLLNSTVNP 9
           CL+N  +NP
Sbjct: 221 CLINHGINP 229


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  V+PI
Sbjct: 577 CTLNFPVSPI 586


>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 1   CLLNSTVN 8
           C +NST+N
Sbjct: 351 CFINSTIN 358


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 584 CTLNFPISPI 593


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 593 CTLNFPISPI 602


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 593 CTLNFPISPI 602


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 583 CTLNFPISPI 592


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 576 CTLNFPISPI 585


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 581 CTLNFPISPI 590


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 580 CTLNFPISPI 589


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 580 CTLNFPISPI 589


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 584 CTLNFPISPI 593


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 582 CTLNFPISPI 591


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 580 CTLNFPISPI 589


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 583 CTLNFPISPI 592


>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 584 CTLNFPISPI 593


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 578 CTLNFPISPI 587


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 589 CTLNFPISPI 598


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 588 CTLNFPISPI 597


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 582 CTLNFPISPI 591


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 583 CTLNFPISPI 592


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 587 CTLNFPISPI 596


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 583 CTLNFPISPI 592


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 583 CTLNFPISPI 592


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 595 CTLNFPISPI 604


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 583 CTLNFPISPI 592


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 595 CTLNFPISPI 604


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 595 CTLNFPISPI 604


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 582 CTLNFPISPI 591


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 585 CTLNFPISPI 594


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 583 CTLNFPISPI 592


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 578 CTLNFPISPI 587


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 578 CTLNFPISPI 587


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 579 CTLNFPISPI 588


>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 583 CTLNFPISPI 592


>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   CLLNSTVNPI 10
           C LN  ++PI
Sbjct: 584 CTLNLPISPI 593


>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61

Query: 1   CLLNSTVNPI 10
           C LNS  +P+
Sbjct: 591 CPLNSNGDPV 600


>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4  NSTVNP 9
          N+T+NP
Sbjct: 32 NTTINP 37


>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain

Query: 2   LLNSTVNP 9
           LLN+T NP
Sbjct: 102 LLNNTKNP 109


>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain

Query: 2   LLNSTVNP 9
           LLN+T NP
Sbjct: 102 LLNNTKNP 109


>sp|MC148_MCV1|CHEMOKINE-LIKE protein MC148|Molluscum contagiosum virus subtype 1

Query: 1  CLLNSTVNPI 10
          C LN T  PI
Sbjct: 30 CCLNPTNRPI 39




79|Sequence|391|400|TVNPIIYALR

>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)

Query: 2   VNPIIYAL 9
           +NPI+YAL
Sbjct: 301 INPILYAL 308


>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain AD169)

Query: 2   VNPIIYAL 9
           +NPI+YAL
Sbjct: 301 INPILYAL 308


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1   TVNPII 6
           TVNPII
Sbjct: 642 TVNPII 647


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 1   TVNPIIYA 8
           TVNPI+ +
Sbjct: 643 TVNPIVLS 650


>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1   TVNPII 6
           TVNPI+
Sbjct: 533 TVNPIV 538


>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1   TVNPII 6
           TVNPI+
Sbjct: 353 TVNPIV 358


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1   TVNPII 6
           TVNPI+
Sbjct: 633 TVNPIV 638


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1   TVNPII 6
           TVNPI+
Sbjct: 633 TVNPIV 638


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1   TVNPII 6
           TVNPI+
Sbjct: 633 TVNPIV 638


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1   TVNPII 6
           TVNPI+
Sbjct: 633 TVNPIV 638


>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1   TVNPII 6
           TVNPI+
Sbjct: 402 TVNPIV 407


>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1   TVNPII 6
           TVNPI+
Sbjct: 633 TVNPIV 638


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 1   TVNPII 6
           TVNPI+
Sbjct: 633 TVNPIV 638


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1   TVNPII 6
           TVNPI+
Sbjct: 633 TVNPIV 638


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1   TVNPII 6
           TVNPI+
Sbjct: 633 TVNPIV 638


>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 1   TVNPII 6
           TVNPI+
Sbjct: 353 TVNPIV 358


>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 2   VNPIIYALR 10
           V PI YA+R
Sbjct: 234 VTPISYAVR 242


>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)

Query: 3  NPIIYALR 10
          NPIIY  R
Sbjct: 25 NPIIYMRR 32


>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   TVNPIIYALR 10
           T+N ++Y LR
Sbjct: 378 TINCLLYILR 387


>sp|UL33_HHV7J|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 7 (strain JI)

Query: 3   NPIIYAL 9
           NP++YA 
Sbjct: 307 NPLVYAF 313


>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)

Query: 1   TVNPIIYALR 10
           T+N ++Y LR
Sbjct: 378 TINCLLYILR 387


>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   NPIIYALR 10
           NP+ +ALR
Sbjct: 132 NPLWHALR 139


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    TVNPIIYALR 10
            T+  ++YALR
Sbjct: 4492 TMADLVYALR 4501


>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)

Query: 3   NPIIYALR 10
           NP+ +ALR
Sbjct: 132 NPLWHALR 139


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    TVNPIIYALR 10
            T+  ++YALR
Sbjct: 4515 TMADLVYALR 4524


>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   TVNPII 6
           TVNP+I
Sbjct: 686 TVNPLI 691


>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   TVNPII 6
           TVNP+I
Sbjct: 686 TVNPLI 691


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 2    VNPIIYALR 10
            + P++ ALR
Sbjct: 2483 ITPVLLALR 2491


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 2    VNPIIYALR 10
            + P++ ALR
Sbjct: 2481 ITPVLLALR 2489


>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2

Query: 2  VNPIIYAL 9
          +NPI Y+L
Sbjct: 60 LNPIDYSL 67


>sp|UL33_HHV6U|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 6A (strain

Query: 3   NPIIYAL 9
           NP++YA 
Sbjct: 290 NPLVYAF 296


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1    TVNPIIYALR 10
            T+  ++YALR
Sbjct: 4502 TMMDLVYALR 4511




80|Sequence|396|405|IYALRSKDLR

>sp|VE6_HPV54|PROTEIN E6|Human papillomavirus type 54

Query: 1  IYALRSKDL 9
          IYA + KDL
Sbjct: 44 IYAFQYKDL 52


>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   YALRSKDL 9
           YAL SKDL
Sbjct: 125 YALVSKDL 132


>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   YALRSKDL 9
           YAL SKDL
Sbjct: 126 YALVSKDL 133


>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2   YALRSKDL 9
           YAL SKDL
Sbjct: 125 YALVSKDL 132


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 1    IYALRSK 7
            +YALR+K
Sbjct: 1643 LYALRTK 1649


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 1    IYALRSK 7
            +YALR+K
Sbjct: 1643 LYALRTK 1649


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 1  IYALRSKDL 9
          +YA R +DL
Sbjct: 18 VYACRVEDL 26


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1  IYALRSKDL 9
          +YA R +DL
Sbjct: 18 VYACRVEDL 26




81|Sequence|401|410|SKDLRHAFRS

>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus

Query: 4   LRHAFR 9
           LRH FR
Sbjct: 124 LRHGFR 129


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 4   LRHAFR 9
           L HAFR
Sbjct: 646 LHHAFR 651


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 4   LRHAFR 9
           L HAFR
Sbjct: 646 LHHAFR 651


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 4   LRHAFR 9
           L HAFR
Sbjct: 646 LHHAFR 651


>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate

Query: 2   KDLRHA 7
           KDL+HA
Sbjct: 113 KDLKHA 118


>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)

Query: 2   KDLRHA 7
           KDL+HA
Sbjct: 113 KDLKHA 118


>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   KDLRHA 7
           KDL+HA
Sbjct: 113 KDLKHA 118


>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)

Query: 2   KDLRHA 7
           KDL+HA
Sbjct: 113 KDLKHA 118




82|Sequence|406|415|HAFRSMFPSC

>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 1   HAFRSMFPSC 10
           H  R+MFP C
Sbjct: 92  HKQRNMFPRC 101


>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain

Query: 1   HAFRSMFPS 9
           H F +M+PS
Sbjct: 315 HPFSAMYPS 323


>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 4   RSMFPSC 10
           R+MFP C
Sbjct: 95  RNMFPRC 101


>sp|HBSAG_HBVA3|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 4   RSMFPSC 10
            SMFPSC
Sbjct: 305 NSMFPSC 311


>sp|HBSAG_HBVA6|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 4   RSMFPSC 10
            SMFPSC
Sbjct: 294 NSMFPSC 300


>sp|HBSAG_HBVA1|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 4   RSMFPSC 10
            SMFPSC
Sbjct: 305 NSMFPSC 311


>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D

Query: 4   RSMFPSC 10
            SMFPSC
Sbjct: 294 NSMFPSC 300


>sp|HBSAG_HBVA7|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 4   RSMFPSC 10
            SMFPSC
Sbjct: 305 NSMFPSC 311


>sp|HBSAG_HBVA5|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 4   RSMFPSC 10
            SMFPSC
Sbjct: 305 NSMFPSC 311


>sp|HBSAG_HBVF3|LARGE envelope protein|Hepatitis B virus genotype F1

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVA4|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 4   RSMFPSC 10
            SMFPSC
Sbjct: 305 NSMFPSC 311


>sp|HBSAG_HBVF4|LARGE envelope protein|Hepatitis B virus genotype F2

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVB4|LARGE envelope protein|Hepatitis B virus genotype B/C

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 295 SMFPSC 300


>sp|HBSAG_HBVA8|LARGE envelope protein|Hepatitis B virus genotype A3

Query: 4   RSMFPSC 10
            SMFPSC
Sbjct: 305 NSMFPSC 311


>sp|HBSAG_HBVA9|LARGE envelope protein|Hepatitis B virus genotype A3

Query: 4   RSMFPSC 10
            SMFPSC
Sbjct: 305 NSMFPSC 311


>sp|HBSAG_HBVB2|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 295 SMFPSC 300


>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVB7|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 305 SMFPSC 310


>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 305 SMFPSC 310


>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVB8|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVB5|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVB6|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVB1|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 295 SMFPSC 300


>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 305 SMFPSC 310


>sp|HBSAG_HBVC0|LARGE envelope protein|Hepatitis B virus genotype C

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVH3|LARGE envelope protein|Hepatitis B virus genotype H

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVC5|LARGE envelope protein|Hepatitis B virus genotype C

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVC1|LARGE envelope protein|Hepatitis B virus genotype C

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVH2|LARGE envelope protein|Hepatitis B virus genotype H

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVH1|LARGE envelope protein|Hepatitis B virus genotype H

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVC4|LARGE envelope protein|Hepatitis B virus genotype C

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVB3|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVCJ|LARGE envelope protein|Hepatitis B virus genotype C

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|HBSAG_HBVC8|LARGE envelope protein|Hepatitis B virus genotype C

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 295 SMFPSC 300


>sp|HBSAG_HBVC3|LARGE envelope protein|Hepatitis B virus genotype C

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 2    AFRSMFPSC 10
            AFR + P+C
Sbjct: 1279 AFRVLRPAC 1287


>sp|HBSAG_HBVC2|LARGE envelope protein|Hepatitis B virus genotype C

Query: 5   SMFPSC 10
           SMFPSC
Sbjct: 306 SMFPSC 311


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 2    AFRSMFPSC 10
            AFR + P+C
Sbjct: 1280 AFRVLRPAC 1288


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 2    AFRSMFPSC 10
            AFR + P+C
Sbjct: 1280 AFRVLRPAC 1288


>sp|HBSAG_HBVC6|SMALL envelope protein|Hepatitis B virus genotype C

Query: 4   RSMFPSC 10
            SMFPSC
Sbjct: 131 TSMFPSC 137


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1   HAFRSMF 7
           HA RS+F
Sbjct: 600 HALRSIF 606


>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United

Query: 3   FRSMFPSC 10
           FRS  P C
Sbjct: 433 FRSTMPGC 440


>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)

Query: 3   FRSMFPSC 10
           F+SM P C
Sbjct: 251 FKSMIPLC 258


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 1   HAFRSMF 7
           HA RS+F
Sbjct: 599 HALRSVF 605


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1   HAFRSMF 7
           HA RS+F
Sbjct: 600 HALRSVF 606


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1   HAFRSMF 7
           HA RS+F
Sbjct: 599 HALRSVF 605


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank

Query: 1   HAFRSMF 7
           HA RS+F
Sbjct: 599 HALRSVF 605


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 1   HAFRSMF 7
           HA RS+F
Sbjct: 600 HALRSVF 606


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 2   AFRSMF 7
           AFRS+F
Sbjct: 739 AFRSLF 744


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 2   AFRSMF 7
           AFRS+F
Sbjct: 735 AFRSLF 740


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 2   AFRSMF 7
           AFRS+F
Sbjct: 739 AFRSLF 744


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 2   AFRSMF 7
           AFRS+F
Sbjct: 734 AFRSLF 739


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 2   AFRSMFPSC 10
           A+ SMF SC
Sbjct: 958 AWTSMFASC 966


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 2   AFRSMFPSC 10
           A+ SMF SC
Sbjct: 958 AWTSMFASC 966


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1   HAFRSMF 7
           HA RS+F
Sbjct: 599 HAIRSVF 605


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 2   AFRSMFPSC 10
           A+ SMF SC
Sbjct: 958 AWTSMFASC 966


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 2   AFRSMFPSC 10
           A+ SMF SC
Sbjct: 958 AWTSMFASC 966


>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D

Query: 5   SMFPSC 10
           SM+PSC
Sbjct: 295 SMYPSC 300


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 2   AFRSMFPSC 10
           A+ SMF SC
Sbjct: 958 AWTSMFASC 966


>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D

Query: 5   SMFPSC 10
           SM+PSC
Sbjct: 295 SMYPSC 300


>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D

Query: 5   SMFPSC 10
           SM+PSC
Sbjct: 295 SMYPSC 300


>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D

Query: 5   SMFPSC 10
           SM+PSC
Sbjct: 295 SMYPSC 300


>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D

Query: 5   SMFPSC 10
           SM+PSC
Sbjct: 295 SMYPSC 300


>sp|HBSAG_HBVG3|LARGE envelope protein|Hepatitis B virus genotype G

Query: 5   SMFPSC 10
           SM+PSC
Sbjct: 305 SMYPSC 310


>sp|HBSAG_HBVD1|LARGE envelope protein|Hepatitis B virus genotype D

Query: 5   SMFPSC 10
           SM+PSC
Sbjct: 295 SMYPSC 300


>sp|HBSAG_HBVC7|LARGE envelope protein|Hepatitis B virus genotype C

Query: 5   SMFPSC 10
           SM+PSC
Sbjct: 306 SMYPSC 311


>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)

Query: 5   SMFPSC 10
           S+FP C
Sbjct: 271 SLFPDC 276


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 3   FRSMFPS 9
           F+S++PS
Sbjct: 573 FQSLYPS 579


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 3   FRSMFPS 9
           F+S++PS
Sbjct: 573 FQSLYPS 579


>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)

Query: 3   FRSMFPS 9
           F+S++PS
Sbjct: 572 FQSLYPS 578


>sp|ORF49_HHV8P|PROTEIN ORF49|Human herpesvirus 8 type P

Query: 1  HAFRSMFPS 9
          H FR  +PS
Sbjct: 14 HLFRYHYPS 22


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1   HAFRSMFP 8
           HAF   FP
Sbjct: 834 HAFYQRFP 841


>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1   HAFRSMFP 8
           HAF   FP
Sbjct: 834 HAFYQRFP 841


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 1   HAFRSMF 7
           H F SMF
Sbjct: 397 HLFTSMF 403




83|Sequence|411|420|MFPSCEGTAQ

>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   MFPSCEGTA 9
           +FPSC+ TA
Sbjct: 329 LFPSCKATA 337


>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   MFPSCEGTA 9
           +FPSC+ TA
Sbjct: 329 LFPSCKATA 337


>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   MFPSCEGTA 9
           +FPSC+ TA
Sbjct: 329 LFPSCKATA 337


>sp|NEF_HV2SB|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 2  FPSCEG 7
           PSCEG
Sbjct: 52 LPSCEG 57


>sp|NEF_HV2KR|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 2  FPSCEG 7
           PSCEG
Sbjct: 52 LPSCEG 57


>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1   MFPSCEG 7
           ++PSC+G
Sbjct: 440 IWPSCKG 446


>sp|YVCA_VACCC|UNCHARACTERIZED 8.0 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  MFPSCEGTAQ 10
          +FP+  GT++
Sbjct: 6  LFPTMSGTSR 15


>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   PSCEGTA 9
           P+C GTA
Sbjct: 470 PNCVGTA 476


>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3  PSCEGTA 9
          P C+G+A
Sbjct: 92 PYCDGSA 98


>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  PSCEGTA 9
          P C+G+A
Sbjct: 92 PYCDGSA 98


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 2    FPSCEGT 8
            F SC GT
Sbjct: 1063 FESCPGT 1069


>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7

Query: 2   FPSCEG 7
           FP C G
Sbjct: 307 FPKCTG 312


>sp|GO_HHV7J|GLYCOPROTEIN U47 homolog|Human herpesvirus 7 (strain JI)

Query: 2   FPSCEGTA 9
           FPS  GT+
Sbjct: 281 FPSTRGTS 288


>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40

Query: 2   FPSCEG 7
           FP C G
Sbjct: 306 FPKCTG 311


>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   MFPSCE 6
           + PSCE
Sbjct: 215 LLPSCE 220


>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   MFPSCE 6
           + PSCE
Sbjct: 215 LLPSCE 220


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    FPSCEGT 8
            F  CEGT
Sbjct: 1050 FNYCEGT 1056


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    FPSCEGT 8
            F  CEGT
Sbjct: 1050 FNYCEGT 1056


>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5

Query: 2   FPSCEG 7
           FP C G
Sbjct: 307 FPKCTG 312


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    FPSCEGT 8
            F  CEGT
Sbjct: 1052 FDFCEGT 1058


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    FPSCEGT 8
            F  CEGT
Sbjct: 1050 FNYCEGT 1056


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    FPSCEGT 8
            F  CEGT
Sbjct: 1050 FNYCEGT 1056


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    FPSCEGT 8
            F  CEGT
Sbjct: 1050 FNYCEGT 1056


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    FPSCEGT 8
            F  CEGT
Sbjct: 1052 FDFCEGT 1058


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    FPSCEGT 8
            F  CEGT
Sbjct: 1052 FDFCEGT 1058


>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2

Query: 2   FPSCEG 7
           FP C G
Sbjct: 307 FPKCTG 312


>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12

Query: 2   FPSCEG 7
           FP C G
Sbjct: 309 FPKCTG 314


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2    FPSCEGT 8
            F  CEGT
Sbjct: 1051 FDLCEGT 1057


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    FPSCEGT 8
            F  CEGT
Sbjct: 1052 FDFCEGT 1058


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2    FPSCEGT 8
            F  CEGT
Sbjct: 1052 FDLCEGT 1058


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2    FPSCEGT 8
            F  CEGT
Sbjct: 1052 FDLCEGT 1058


>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3  PSCEG 7
          P+CEG
Sbjct: 37 PNCEG 41


>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   FPSCEGT 8
           F  CEGT
Sbjct: 772 FDFCEGT 778


>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P

Query: 1   MFPSCEGT 8
           ++P CE T
Sbjct: 277 VYPDCEKT 284




84|Sequence|416|425|EGTAQPLDNS

>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30

Query: 5   QPLDNS 10
           QPLDN+
Sbjct: 493 QPLDNA 498


>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)

Query: 1  EGTAQP 6
          EGTA+P
Sbjct: 78 EGTARP 83


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3    TAQPLDN 9
            T QPL+N
Sbjct: 1949 TGQPLNN 1955


>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)

Query: 1  EGTAQP 6
          EGTA+P
Sbjct: 78 EGTARP 83


>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)

Query: 1  EGTAQP 6
          EGTA+P
Sbjct: 78 EGTARP 83


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3    TAQPLDN 9
            T QPL+N
Sbjct: 1949 TGQPLNN 1955


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3    TAQPLDN 9
            T QPL+N
Sbjct: 1949 TGQPLNN 1955


>sp|YVBA_VACCC|UNCHARACTERIZED 11.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   GTAQPLD 8
           GT  PLD
Sbjct: 94  GTCSPLD 100


>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66

Query: 5   QPLDNS 10
           QPLDN+
Sbjct: 492 QPLDNA 497


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 1    EGTAQPLD 8
            +GT  PLD
Sbjct: 1210 DGTGDPLD 1217


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 1    EGTAQPLD 8
            +GT  PLD
Sbjct: 1210 DGTGDPLD 1217


>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69

Query: 3   TAQPLDNS 10
           TA+PL N+
Sbjct: 212 TAEPLSNN 219


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 1    EGTAQPLD 8
            +GT  PLD
Sbjct: 1210 DGTGDPLD 1217


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 1    EGTAQPLD 8
            +GT  PLD
Sbjct: 1210 DGTGDPLD 1217


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 1    EGTAQPLD 8
            +GT  PLD
Sbjct: 1210 DGTGDPLD 1217


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 1    EGTAQPLD 8
            +GT  PLD
Sbjct: 1210 DGTGDPLD 1217


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 1    EGTAQPLD 8
            +GT  PLD
Sbjct: 1210 DGTGDPLD 1217


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 1    EGTAQPLD 8
            +GT  PLD
Sbjct: 1210 DGTGDPLD 1217


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 1    EGTAQPLD 8
            +GT  PLD
Sbjct: 1210 DGTGDPLD 1217


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 2   GTAQPL 7
           GTAQP+
Sbjct: 527 GTAQPI 532


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related

Query: 2   GTAQPLDN 9
           G  QP DN
Sbjct: 773 GLLQPTDN 780


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 2   GTAQPLDN 9
           G  QP DN
Sbjct: 773 GLLQPTDN 780


>sp|FUS_MUMPM|FUSION glycoprotein F0|Mumps virus genotype B (strain

Query: 5  QPLDNS 10
          QP DNS
Sbjct: 58 QPTDNS 63


>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain

Query: 5  QPLDNS 10
          QP DNS
Sbjct: 58 QPTDNS 63


>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)

Query: 5  QPLDNS 10
          QP DNS
Sbjct: 58 QPTDNS 63


>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)

Query: 5  QPLDNS 10
          QP DNS
Sbjct: 58 QPTDNS 63


>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)

Query: 5  QPLDNS 10
          QP DNS
Sbjct: 58 QPTDNS 63


>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)

Query: 5  QPLDNS 10
          QP DNS
Sbjct: 58 QPTDNS 63




85|Sequence|421|430|PLDNSMGDSD

>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P

Query: 1   PLDNSMGD 8
           P D SMGD
Sbjct: 151 PADASMGD 158


>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63

Query: 2   LDNSMGDSD 10
           LDNS GD D
Sbjct: 482 LDNSTGDYD 490


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1    PLDNSMGDS 9
            P D+ +GDS
Sbjct: 2021 PKDSRLGDS 2029


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 1    PLDNSM 6
            P+DN+M
Sbjct: 1238 PMDNNM 1243


>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   PLDNSMGD 8
           PLD  +GD
Sbjct: 313 PLDKWVGD 320


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2390 PLEGEPGDPD 2399


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2390 PLEGEPGDPD 2399


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2390 PLEGEPGDPD 2399


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2399 PLEGEPGDPD 2408


>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)

Query: 3   DNSMGD 8
           DN+MGD
Sbjct: 188 DNTMGD 193


>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 4   NSMGDS 9
           NS+GDS
Sbjct: 733 NSIGDS 738


>sp|UL09_HCMVM|MEMBRANE glycoprotein UL9|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  PLDNSMGDSD 10
          PL+NS+   D
Sbjct: 45 PLNNSLFQDD 54


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2390 PLEGEPGDPD 2399


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2401 PLEGEPGDPD 2410


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2390 PLEGEPGDPD 2399


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2390 PLEGEPGDPD 2399


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2390 PLEGEPGDPD 2399


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2390 PLEGEPGDPD 2399


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2390 PLEGEPGDPD 2399


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2396 PLEGEPGDPD 2405


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2400 PLEGEPGDPD 2409


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2390 PLEGEPGDPD 2399


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 2    LDNSMGDS 9
            +DN+MG++
Sbjct: 1387 VDNNMGET 1394


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2390 PLEGEPGDPD 2399


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2394 PLEGEPGDPD 2403


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2401 PLEGEPGDPD 2410


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2400 PLEGEPGDPD 2409


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2397 PLEGEPGDPD 2406


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2394 PLEGEPGDPD 2403


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2401 PLEGEPGDPD 2410


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2390 PLEGEPGDPD 2399


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2394 PLEGEPGDPD 2403


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2401 PLEGEPGDPD 2410


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2394 PLEGEPGDPD 2403


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2390 PLEGEPGDPD 2399


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2398 PLEGEPGDPD 2407


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2394 PLEGEPGDPD 2403


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2394 PLEGEPGDPD 2403


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2396 PLEGEPGDPD 2405


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2396 PLEGEPGDPD 2405


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1    PLDNSMGDSD 10
            PL+   GD D
Sbjct: 2403 PLEGEPGDPD 2412


>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980

Query: 1   PLDNSMGDSD 10
           P D S+GD +
Sbjct: 327 PSDKSIGDCN 336


>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)

Query: 2   LDNSMG 7
           L+NSMG
Sbjct: 343 LENSMG 348


>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)

Query: 2   LDNSMG 7
           L+NSMG
Sbjct: 343 LENSMG 348


>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)

Query: 2   LDNSMG 7
           L+NSMG
Sbjct: 343 LENSMG 348


>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)

Query: 2   LDNSMG 7
           L+NSMG
Sbjct: 343 LENSMG 348


>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)

Query: 2   LDNSMG 7
           L+NSMG
Sbjct: 343 LENSMG 348


>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)

Query: 2   LDNSMG 7
           L+NSMG
Sbjct: 343 LENSMG 348


>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)

Query: 2   LDNSMG 7
           L+NSMG
Sbjct: 343 LENSMG 348


>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)

Query: 2   LDNSMG 7
           L+NSMG
Sbjct: 343 LENSMG 348


>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)

Query: 2   LDNSMG 7
           L+NSMG
Sbjct: 343 LENSMG 348


>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)

Query: 2   LDNSMG 7
           L+NSMG
Sbjct: 343 LENSMG 348


>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)

Query: 2   LDNSMG 7
           L+NSMG
Sbjct: 343 LENSMG 348




86|Sequence|426|435|MGDSDCLHKH

>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 288 IGEADCLHE 296


>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 305 IGEADCLHE 313


>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 303 IGEADCLHE 311


>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 300 IGEADCLHE 308


>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 303 IGEADCLHE 311


>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 303 IGEADCLHE 311


>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 305 IGEADCLHE 313


>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 301 IGEADCLHE 309


>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 303 IGEADCLHE 311


>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 303 IGEADCLHE 311


>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 298 IGEADCLHE 306


>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 288 IGEADCLHE 296


>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 290 IGEADCLHE 298


>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 290 IGEADCLHE 298


>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 290 IGEADCLHE 298


>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 290 IGEADCLHE 298


>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 290 IGEADCLHE 298


>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 303 IGEADCLHE 311


>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 297 IGEADCLHE 305


>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 290 IGEADCLHE 298


>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 290 IGEADCLHE 298


>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 290 IGEADCLHE 298


>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 290 IGEADCLHE 298


>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 290 IGEADCLHE 298


>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 303 IGEADCLHE 311


>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 303 IGEADCLHE 311


>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 303 IGEADCLHE 311


>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 294 IGEADCLHE 302


>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 304 IGEADCLHE 312


>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 295 IGEADCLHE 303


>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 296 IGEADCLHE 304


>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 295 IGEADCLHE 303


>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 298 IGEADCLHE 306


>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)

Query: 1   MGDSDCLH 8
           +G++DCLH
Sbjct: 303 IGEADCLH 310


>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)

Query: 1   MGDSDCLH 8
           +G++DCLH
Sbjct: 303 IGEADCLH 310


>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)

Query: 1   MGDSDCLH 8
           +G++DCLH
Sbjct: 303 IGEADCLH 310


>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)

Query: 1   MGDSDCLH 8
           +G++DCLH
Sbjct: 303 IGEADCLH 310


>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 298 IGEADCLHE 306


>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)

Query: 1   MGDSDCLHK 9
           +G++DCLH+
Sbjct: 305 IGEADCLHE 313


>sp|TRM2_HHV6U|TRIPARTITE terminase subunit 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 2  GDSDCLHK 9
          GD DC+H+
Sbjct: 66 GDVDCVHR 73


>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)

Query: 1   MGDSDCLHK 9
           +G+ DCLH+
Sbjct: 305 IGERDCLHE 313


>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)

Query: 1   MGDSDCLHK 9
           +G +DCLH+
Sbjct: 290 IGQADCLHE 298


>sp|TRM2_HHV6Z|TRIPARTITE terminase subunit 2|Human herpesvirus 6B (strain Z29)

Query: 2  GDSDCLHK 9
          GD DC+H+
Sbjct: 66 GDVDCVHR 73


>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)

Query: 1   MGDSDCLHK 9
           +G+ DCLH+
Sbjct: 305 IGERDCLHE 313


>sp|VE8E2_HPV11|PROTEIN E8^E2C|Human papillomavirus 11

Query: 2   GDSDCL 7
           GDS+CL
Sbjct: 101 GDSNCL 106


>sp|VE8E2_HPV13|PROTEIN E8^E2C|Human papillomavirus 13

Query: 2   GDSDCL 7
           GDS+CL
Sbjct: 111 GDSNCL 116


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1    MGDSDCL 7
            +GD+DC+
Sbjct: 6585 VGDTDCV 6591


>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P

Query: 2   GDSDCLH 8
           GD DC H
Sbjct: 295 GDRDCSH 301


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 584 TDCFRKH 590


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 585 TDCFRKH 591


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 581 TDCFRKH 587


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 587 TDCFRKH 593


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 583 TDCFRKH 589


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 591 TDCFRKH 597


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 588 TDCFRKH 594


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 584 TDCFRKH 590


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 583 TDCFRKH 589


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 589 TDCFRKH 595


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 589 TDCFRKH 595


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 583 TDCFRKH 589


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 587 TDCFRKH 593


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 587 TDCFRKH 593


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 588 TDCFRKH 594


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 587 TDCFRKH 593


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 583 TDCFRKH 589


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 587 TDCFRKH 593


>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 587 TDCFRKH 593


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 587 TDCFRKH 593


>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 587 TDCFRKH 593


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 583 TDCFRKH 589


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 583 TDCFRKH 589


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 583 TDCFRKH 589


>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 583 TDCFRKH 589


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 584 TDCFRKH 590


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 587 TDCFRKH 593


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 583 TDCFRKH 589


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 583 TDCFRKH 589


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 583 TDCFRKH 589


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 587 TDCFRKH 593


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 588 TDCFRKH 594


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 4   SDCLHKH 10
           +DC  KH
Sbjct: 583 TDCFRKH 589


>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13

Query: 2   GDSDCL 7
           GDS+CL
Sbjct: 301 GDSNCL 306


>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11

Query: 2   GDSDCL 7
           GDS+CL
Sbjct: 291 GDSNCL 296


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1   MGDSDCL 7
           MGD+ C+
Sbjct: 743 MGDNQCI 749


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1   MGDSDCL 7
           MGD+ C+
Sbjct: 743 MGDNQCI 749


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1   MGDSDCL 7
           MGD+ C+
Sbjct: 743 MGDNQCI 749


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1   MGDSDCL 7
           MGD+ C+
Sbjct: 743 MGDNQCI 749


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1   MGDSDCL 7
           MGD+ C+
Sbjct: 740 MGDNQCI 746


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1   MGDSDCL 7
           MGD+ C+
Sbjct: 740 MGDNQCI 746


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1   MGDSDCL 7
           MGD+ C+
Sbjct: 741 MGDNQCI 747


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1   MGDSDCL 7
           MGD+ C+
Sbjct: 741 MGDNQCI 747


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1   MGDSDCL 7
           MGD+ C+
Sbjct: 743 MGDNQCI 749


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1   MGDSDCL 7
           MGD+ C+
Sbjct: 740 MGDNQCI 746


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1   MGDSDCL 7
           MGD+ C+
Sbjct: 740 MGDNQCI 746


>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)

Query: 3  DSDCLHKH 10
          + +CLH H
Sbjct: 50 EQECLHLH 57


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 1   MGDSDCLHK 9
           +G S C+H+
Sbjct: 638 LGRSGCIHE 646


>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4

Query: 5   DCLHKH 10
           DC H H
Sbjct: 361 DCSHNH 366


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 5   DCLHKH 10
           DC+ KH
Sbjct: 287 DCMAKH 292


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 5   DCLHKH 10
           DC+ KH
Sbjct: 288 DCMAKH 293


>sp|ORF2P_POL1M|ORF2P protein|Poliovirus type 1 (strain Mahoney)

Query: 4  SDCLHK 9
          +DC HK
Sbjct: 5  TDCYHK 10


>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P

Query: 5   DCLHKH 10
           DC+H H
Sbjct: 208 DCVHCH 213


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 1   MGDSDCLHK 9
           +G S C+H+
Sbjct: 639 LGRSGCIHE 647


>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)

Query: 3  DSDCLHKH 10
          + +CLH H
Sbjct: 50 EQECLHLH 57


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 2   GDSDCLHKH 10
           GDS  LH H
Sbjct: 607 GDSLHLHPH 615


>sp|VE8E2_HPV04|PROTEIN E8^E2C|Human papillomavirus 4

Query: 5   DCLHKH 10
           DC H H
Sbjct: 169 DCSHNH 174


>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United

Query: 1   MGDSDCLH 8
           MGD+  LH
Sbjct: 468 MGDAALLH 475


>sp|VGF_VACCA|PRO-VACCINIA growth factor|Vaccinia virus (strain Ankara) (VACV)

Query: 2  GDSDCLH 8
          GD  CLH
Sbjct: 49 GDGYCLH 55


>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a

Query: 2   GDSDCL 7
           GD++CL
Sbjct: 317 GDANCL 322


>sp|VGF_VACCT|PRO-VACCINIA growth factor|Vaccinia virus (strain Tian Tan)

Query: 2  GDSDCLH 8
          GD  CLH
Sbjct: 49 GDGYCLH 55


>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    DSDCLH 8
            D DC H
Sbjct: 1547 DEDCAH 1552


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    DSDCLH 8
            D DC H
Sbjct: 1957 DEDCAH 1962


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    DSDCLH 8
            D DC H
Sbjct: 1957 DEDCAH 1962


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    DSDCLH 8
            D DC H
Sbjct: 1957 DEDCAH 1962


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    DSDCLH 8
            D DC H
Sbjct: 1957 DEDCAH 1962


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 3    DSDCLH 8
            D DC H
Sbjct: 1957 DEDCAH 1962


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    DSDCLH 8
            D DC H
Sbjct: 1957 DEDCAH 1962


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    DSDCLH 8
            D DC H
Sbjct: 1957 DEDCAH 1962


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 5    DCLHKH 10
            +CL KH
Sbjct: 3422 ECLQKH 3427


>sp|VGF_VACCP|PRO-VACCINIA growth factor|Vaccinia virus (strain L-IVP) (VACV)

Query: 2  GDSDCLH 8
          GD  CLH
Sbjct: 49 GDGYCLH 55


>sp|PG036_VACCC|PROTEIN OPG036|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5  DCLHKH 10
          DC+++H
Sbjct: 35 DCINRH 40


>sp|PG036_MONPV|PROTEIN OPG036|Monkeypox virus (MPXV)

Query: 5  DCLHKH 10
          DC+++H
Sbjct: 35 DCINRH 40


>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2

Query: 5  DCLH 8
          DCLH
Sbjct: 29 DCLH 32


>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51

Query: 2   GDSDCL 7
           GD++CL
Sbjct: 289 GDTNCL 294


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 4    SDCLHK 9
            S CLHK
Sbjct: 1178 STCLHK 1183


>sp|VGF_MONPV|PRO-VIRAL epidermal growth factor|Monkeypox virus (MPXV)

Query: 2  GDSDCLH 8
          GD  CLH
Sbjct: 49 GDGYCLH 55


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 3    DSDCLH 8
            DS+C H
Sbjct: 1988 DSNCAH 1993


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 3   DSDCLHKH 10
           +S CLH++
Sbjct: 466 ESRCLHQN 473


>sp|VGF_VACCC|PRO-VACCINIA growth factor|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  GDSDCLH 8
          GD  CLH
Sbjct: 49 GDGYCLH 55


>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980

Query: 2  GDSDCLHKH 10
          GD  CL  H
Sbjct: 18 GDKICLGHH 26


>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44

Query: 2   GDSDCL 7
           GD++CL
Sbjct: 302 GDANCL 307


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 5   DCLHK 9
           DC HK
Sbjct: 468 DCAHK 472


>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)

Query: 2   GDSDCLHKH 10
           G ++C HK+
Sbjct: 864 GGAECSHKN 872




87|Sequence|431|440|CLHKHANNAA

>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1

Query: 2   LHKHANN 8
           LH HANN
Sbjct: 479 LHSHANN 485


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1    CLHKHANNAA 10
            CL KH + +A
Sbjct: 3423 CLQKHKDGSA 3432


>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great

Query: 1  CLHKHANNA 9
          CL K AN++
Sbjct: 7  CLQKQANSS 15


>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   HKHANN 8
           H+HAN+
Sbjct: 372 HRHAND 377


>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7

Query: 2   LHKHANN 8
           LHK +NN
Sbjct: 413 LHKKSNN 419


>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   HKHANN 8
           H+HAN+
Sbjct: 441 HRHAND 446


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1    CLHKHANNA 9
            CL+K  +NA
Sbjct: 1153 CLNKKGSNA 1161


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1    CLHKHANNA 9
            CL+K  +NA
Sbjct: 1153 CLNKKGSNA 1161


>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)

Query: 2   LHKHANN 8
           +H++ANN
Sbjct: 593 IHRYANN 599


>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)

Query: 1   CLHKHANNA 9
           CL  HA+ A
Sbjct: 827 CLRTHASGA 835


>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus

Query: 3   HKHANN 8
           H++ANN
Sbjct: 539 HQYANN 544


>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate

Query: 3   HKHANN 8
           H++ANN
Sbjct: 539 HQYANN 544


>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)

Query: 3   HKHANN 8
           H++ANN
Sbjct: 539 HQYANN 544


>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   HKHANN 8
           H++ANN
Sbjct: 539 HQYANN 544


>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 3   HKHANN 8
           H++ANN
Sbjct: 539 HQYANN 544


>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /

Query: 3   HKHANN 8
           H++ANN
Sbjct: 539 HQYANN 544


>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)

Query: 3   HKHANN 8
           H++ANN
Sbjct: 539 HQYANN 544


>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)

Query: 2    LHKHANNA 9
            +H H+N+A
Sbjct: 1130 IHSHSNSA 1137


>sp|PG108_VAR67|ENVELOPE protein H3|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2  LHKHANN 8
          LH+H N+
Sbjct: 26 LHEHIND 32


>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)

Query: 2   LHKHANN 8
           +H++ANN
Sbjct: 602 IHRYANN 608


>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain

Query: 2   LHKHANN 8
           +H++ANN
Sbjct: 602 IHRYANN 608


>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P

Query: 5   HANNAA 10
           HAN+AA
Sbjct: 407 HANSAA 412




88|Sequence|436|445|ANNAASVHRA

 ***** No hits found ******


89|Sequence|441|450|SVHRAAESCI

>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 2   VHRAAESC 9
           VH+A +SC
Sbjct: 439 VHKAKKSC 446


>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)

Query: 3   HRAAESC 9
           HRA  SC
Sbjct: 208 HRARASC 214


>sp|GD_HHV23|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain 333)

Query: 3   HRAAESC 9
           HRA  SC
Sbjct: 208 HRARASC 214


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 3    HRAAESC 9
            H AAE C
Sbjct: 2654 HMAAEPC 2660


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 3    HRAAESC 9
            H AAE C
Sbjct: 2654 HMAAEPC 2660


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 3    HRAAESC 9
            H AAE C
Sbjct: 2650 HMAAEPC 2656


>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)

Query: 3   HRAAESC 9
           HRA  SC
Sbjct: 208 HRAKGSC 214


>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)

Query: 3   HRAAESC 9
           HRA  SC
Sbjct: 208 HRAKGSC 214


>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)

Query: 3   HRAAESC 9
           HRA  SC
Sbjct: 207 HRAKGSC 213


>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)

Query: 3   HRAAESC 9
           HRA  SC
Sbjct: 208 HRAKGSC 214


>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)

Query: 3   HRAAESC 9
           HRA  SC
Sbjct: 208 HRAKGSC 214


>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)

Query: 3   HRAAESC 9
           HRA  SC
Sbjct: 208 HRAKGSC 214


>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)

Query: 1   SVHRAAESCI 10
           ++H +A  CI
Sbjct: 194 AIHTSASCCI 203


>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)

Query: 1   SVHRAAESCI 10
           ++H +A  CI
Sbjct: 194 AIHTSASCCI 203


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2    VHRAAESC 9
            +HR  E C
Sbjct: 1979 IHRLKEGC 1986


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 2    VHRAAESC 9
            +HR  E C
Sbjct: 1979 IHRLKEGC 1986


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2    VHRAAESC 9
            +HR  E C
Sbjct: 1980 IHRLKEGC 1987




90|Sequence|446|455|AESCIKSTVK

>sp|PG039_MONPV|INTERFERON antagonist OPG039|Monkeypox virus (MPXV)

Query: 3   SCIKSTVK 10
           SCI +T+K
Sbjct: 162 SCIHTTIK 169


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 3    SCIKSTVK 10
            SCIKS V+
Sbjct: 2091 SCIKSVVR 2098


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 3    SCIKSTVK 10
            SCIKS V+
Sbjct: 2091 SCIKSVVR 2098


>sp|PG039_VACCC|INTERFERON antagonist OPG040|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   SCIKSTVK 10
           SCI +T+K
Sbjct: 162 SCIHTTIK 169


>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)

Query: 1   AESCIKST 8
           AE C KST
Sbjct: 463 AEFCSKST 470


>sp|UL10_HCMVM|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  AESCIKSTVK 10
          +E+C++ TV+
Sbjct: 28 SETCMEVTVR 37


>sp|UL10_HCMVA|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  AESCIKSTVK 10
          +E+C++ TV+
Sbjct: 28 SETCMEVTVR 37




91|Sequence|451|460|KSTVKIAKVT

 ***** No hits found ******


92|Sequence|456|465|IAKVTMSVST

 ***** No hits found ******


93|Sequence|461|472|MSVSTDTSAEAL

>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 1    MSVSTDTSAE 10
            +SVSTDT ++
Sbjct: 1264 ISVSTDTMSD 1273


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 1    MSVSTDTSAE 10
            +SVSTDT ++
Sbjct: 1265 ISVSTDTMSD 1274


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 1    MSVSTDTSAE 10
            +SVSTDT ++
Sbjct: 1264 ISVSTDTMSD 1273


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 1    MSVSTDTSAE 10
            +SVSTDT ++
Sbjct: 1264 ISVSTDTMSD 1273


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 1    MSVSTDTSAE 10
            +SVSTDT ++
Sbjct: 1264 ISVSTDTMSD 1273


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 1    MSVSTDTSAE 10
            +SVSTDT ++
Sbjct: 1264 ISVSTDTMSD 1273


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 1    MSVSTDTSAE 10
            +SVSTDT ++
Sbjct: 1264 ISVSTDTMSD 1273


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 1    MSVSTDTSAE 10
            +SVSTDT ++
Sbjct: 1264 ISVSTDTMSD 1273


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 1    MSVSTDTSAE 10
            +SVSTDT ++
Sbjct: 1264 ISVSTDTMSD 1273


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 1    MSVSTDTSAE 10
            +SVSTDT ++
Sbjct: 1264 ISVSTDTMSD 1273


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 1    MSVSTDTSAE 10
            +SVSTDT ++
Sbjct: 1264 ISVSTDTMSD 1273


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)

Query: 1    MSVSTDTSAE 10
            +SVSTDT ++
Sbjct: 1265 ISVSTDTMSD 1274


>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28

Query: 1   MSVSTDTSA 9
           + VSTD+SA
Sbjct: 344 LCVSTDSSA 352


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3    VSTDTSAEA 11
            VSTDT+ ++
Sbjct: 4362 VSTDTTVQS 4370


>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3

Query: 1   MSVSTDTSA 9
           + VST+TSA
Sbjct: 374 LCVSTETSA 382


>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60

Query: 5   TDTSAEAL 12
           TDTSAE L
Sbjct: 97  TDTSAELL 104


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 3    VSTDTSAEA 11
            VSTDT+ ++
Sbjct: 4362 VSTDTTVQS 4370