CIA30_HUMAN Blast Output
Viruses
1|Sequence|1|10|MALVHKLLRG

>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 5 HKLLRG 10
HKLLRG
Sbjct: 758 HKLLRG 763




2|Sequence|6|15|KLLRGTYFLR

>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 2 LLRGTYFL 9
+LRGTYF+
Sbjct: 770 ILRGTYFV 777




3|Sequence|11|20|TYFLRKFSKP

>sp|HELI1_HVAVE|PUTATIVE ATP-dependent RNA helicase|Heliothis virescens ascovirus 3e

Query: 2 YFLRKFS 8
YFLRKF+
Sbjct: 268 YFLRKFA 274


>sp|MCP_IIV3|MAJOR capsid protein|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 TYFLRKFSK 9
TYF+R+F K
Sbjct: 37 TYFVREFKK 45


>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)

Query: 1 TYFLRKFSKP 10
TYF KF++P
Sbjct: 1836 TYFKDKFNEP 1845


>sp|DNLI_BPT6|DNA ligase|Enterobacteria phage T6 (Bacteriophage T6)

Query: 2 YFLRKFSKP 10
Y+++K+ KP
Sbjct: 45 YYIKKWPKP 53


>sp|DNLI_BPT4|DNA ligase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 YFLRKFSKP 10
Y+++K+ KP
Sbjct: 45 YYIKKWPKP 53


>sp|YR259_MIMIV|UNCHARACTERIZED protein R259|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 FLRKFSKP 10
F RKF KP
Sbjct: 45 FTRKFEKP 52




4|Sequence|16|25|KFSKPTSALY

>sp|HN_PI3B|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (BPIV-3)

Query: 2 FSKPTSALY 10
F KP +ALY
Sbjct: 311 FDKPYAALY 319


>sp|POL1_CPMVS|RNA1 polyprotein|Cowpea mosaic virus (strain SB)

Query: 1 KFSKPTSAL 9
K+S+P SAL
Sbjct: 1237 KYSQPMSAL 1245


>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180

Query: 1 KFSKPTSALY 10
KFS P S LY
Sbjct: 82 KFSLPESTLY 91


>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68

Query: 1 KFSKPTSALY 10
KFS P S LY
Sbjct: 82 KFSVPESTLY 91




5|Sequence|21|30|TSALYPFLGI

>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 2 SALYPFLGI 10
SA YPF+GI
Sbjct: 2347 SAGYPFVGI 2355


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 1 TSALYPFLGI 10
TSA YP++ I
Sbjct: 1845 TSAGYPYVAI 1854


>sp|HN_SENDH|HEMAGGLUTININ-NEURAMINIDASE virus (strain Harris) (SeV)

Query: 2 SALYPFLG 9
SALYP +G
Sbjct: 318 SALYPSVG 325


>sp|HN_SENDZ|HEMAGGLUTININ-NEURAMINIDASE virus (strain Z) (SeV)

Query: 2 SALYPFLG 9
SALYP +G
Sbjct: 318 SALYPSVG 325


>sp|HN_SENDF|HEMAGGLUTININ-NEURAMINIDASE virus (strain Fushimi) (SeV)

Query: 2 SALYPFLG 9
SALYP +G
Sbjct: 318 SALYPSVG 325


>sp|HN_SENDA|HEMAGGLUTININ-NEURAMINIDASE virus (strain Hamamatsu) (SeV)

Query: 2 SALYPFLG 9
SALYP +G
Sbjct: 318 SALYPSVG 325


>sp|HN_SENDO|HEMAGGLUTININ-NEURAMINIDASE virus (strain Ohita) (SeV)

Query: 2 SALYPFLG 9
SALYP +G
Sbjct: 318 SALYPSVG 325


>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 2 SALYPFLGI 10
+A YP LG+
Sbjct: 894 TAAYPLLGV 902




6|Sequence|26|35|PFLGIRFAEY

>sp|LT_POVLY|LARGE T antigen|B-lymphotropic polyomavirus (LPV)

Query: 1 PFLGIRFA 8
P +G+RFA
Sbjct: 598 PTIGVRFA 605




7|Sequence|31|40|RFAEYSSSLQ

***** No hits found ******


8|Sequence|36|45|SSSLQKPVAS

***** No hits found ******


9|Sequence|41|50|KPVASPGKAS

>sp|CVC1_EHV2|CAPSID vertex component 1|Equine herpesvirus 2 (strain 86/87)

Query: 1 KPVASPGKA 9
+PVA PG A
Sbjct: 272 RPVAPPGGA 280




10|Sequence|46|55|PGKASSQRKT

>sp|NCAP_CPSVP|NUCLEOPROTEIN psorosis virus (isolate Spain/P-121)

Query: 1 PGKASSQRKT 10
PGKA +RK
Sbjct: 220 PGKADDKRKV 229




11|Sequence|51|60|SQRKTEGDLQ

>sp|TBP_ASFWA|PUTATIVE TATA-binding protein pB263R|African swine fever virus (isolate

Query: 3 RKTEGD 8
RKTEGD
Sbjct: 81 RKTEGD 86


>sp|TBP_ASFP4|PUTATIVE TATA-binding protein pB263R|African swine fever virus (isolate

Query: 3 RKTEGD 8
RKTEGD
Sbjct: 81 RKTEGD 86


>sp|TBP_ASFB7|PUTATIVE TATA-binding protein pB263R|African swine fever virus (strain

Query: 3 RKTEGD 8
RKTEGD
Sbjct: 81 RKTEGD 86


>sp|TBP_ASFK5|PUTATIVE TATA-binding protein pB263R|African swine fever virus (isolate

Query: 3 RKTEGD 8
RKTEGD
Sbjct: 81 RKTEGD 86


>sp|TBP_ASFM2|PUTATIVE TATA-binding protein pB263R|African swine fever virus (isolate

Query: 3 RKTEGD 8
RKTEGD
Sbjct: 81 RKTEGD 86


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 1 SQRKTEGDLQ 10
SQ+K EG LQ
Sbjct: 1173 SQQKMEGQLQ 1182


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 1 SQRKTEGDLQ 10
SQ+K EG LQ
Sbjct: 1172 SQQKMEGQLQ 1181




12|Sequence|56|65|EGDLQGDHQK

>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 1 EGDLQGDHQ 9
E DLQGD +
Sbjct: 566 EADLQGDSE 574


>sp|L_TAVCV|RNA-DIRECTED RNA polymerase L|Taro vein chlorosis virus (TAVCV)

Query: 1 EGDLQGD 7
EGDL+GD
Sbjct: 651 EGDLRGD 657


>sp|YR571_MIMIV|UNCHARACTERIZED protein R571|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 EGDLQGD 7
EGDL GD
Sbjct: 177 EGDLYGD 183


>sp|RDRP_THOGV|RNA-DIRECTED RNA polymerase catalytic subunit|Thogoto virus (isolate SiAr 126)

Query: 2 GDLQGDHQK 10
G+L GD +K
Sbjct: 296 GELSGDQEK 304


>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain

Query: 2 GDLQGDHQK 10
G+L GD +K
Sbjct: 297 GELSGDQEK 305




13|Sequence|61|70|GDHQKEVALD

>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United

Query: 2 DHQKEV 7
DHQKEV
Sbjct: 89 DHQKEV 94


>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 2 DHQKEV 7
DHQKEV
Sbjct: 89 DHQKEV 94


>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain

Query: 2 DHQKEV 7
DHQKEV
Sbjct: 89 DHQKEV 94


>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 2 DHQKEV 7
DHQKEV
Sbjct: 95 DHQKEV 100


>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 2 DHQKEV 7
DHQKE+
Sbjct: 89 DHQKEI 94


>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 2 DHQKEV 7
DHQKE+
Sbjct: 89 DHQKEI 94




14|Sequence|66|75|EVALDITSSE

***** No hits found ******


15|Sequence|71|80|ITSSEEKPDV

>sp|POLG_SVDVU|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 1 ITSSEEKPDV 10
ITS++E+P V
Sbjct: 690 ITSTQEQPTV 699


>sp|POLG_SVDVH|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 1 ITSSEEKPDV 10
ITS++E+P V
Sbjct: 690 ITSTQEQPTV 699




16|Sequence|76|85|EKPDVSFDKA

>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 2 KPDVSFDKA 10
+P +SFDKA
Sbjct: 964 RPHMSFDKA 972


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 1 EKPDVSFDK 9
E DVSFDK
Sbjct: 4521 ELNDVSFDK 4529


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 EKPDVSFDK 9
E DVSFDK
Sbjct: 4521 ELNDVSFDK 4529


>sp|YL859_MIMIV|UNCHARACTERIZED protein L859|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 EKPDVSF 7
EKPD+S+
Sbjct: 307 EKPDLSY 313


>sp|YL356_MIMIV|UNCHARACTERIZED protein L356|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 EKPDVSFDK 9
+KPD+ FD+
Sbjct: 219 KKPDIIFDQ 227




17|Sequence|81|90|SFDKAIRDEA

>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 1 SFDKAIRDE 9
SFDKA+ DE
Sbjct: 968 SFDKAVIDE 976


>sp|UBC1_MIMIV|PROBABLE ubiquitin-conjugating enzyme E2 L460|Acanthamoeba polyphaga

Query: 1 SFDKAIRD 8
S+DK IRD
Sbjct: 140 SYDKKIRD 147


>sp|NSP5_ROTB2|NON-STRUCTURAL protein 5|Rotavirus X (isolate

Query: 2 FDKAIRDE 9
+DK I+DE
Sbjct: 88 YDKTIKDE 95


>sp|NSP5_ROTJ1|NON-STRUCTURAL protein 5|Rotavirus X (strain

Query: 2 FDKAIRDE 9
+DK I+DE
Sbjct: 88 YDKTIKDE 95


>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United

Query: 1 SFDKAIRD 8
S DKAI+D
Sbjct: 21 SLDKAIKD 28




18|Sequence|86|95|IRDEAIYHFR

>sp|VPR_HV2KR|PROTEIN Vpr|Human immunodeficiency virus type 2

Query: 1 IRDEAIYHF 9
+R+EA+ HF
Sbjct: 31 LREEALKHF 39


>sp|VPR_HV2RO|PROTEIN Vpr|Human immunodeficiency virus type 2

Query: 1 IRDEAIYHF 9
I++EA+ HF
Sbjct: 31 IKEEALKHF 39


>sp|VPR_HV2D1|PROTEIN Vpr|Human immunodeficiency virus type 2

Query: 1 IRDEAIYHF 9
I++EA+ HF
Sbjct: 31 IKEEALKHF 39


>sp|VPR_HV2CA|PROTEIN Vpr|Human immunodeficiency virus type 2

Query: 1 IRDEAIYHF 9
I++EA+ HF
Sbjct: 31 IKEEALKHF 39


>sp|VPR_HV2SB|PROTEIN Vpr|Human immunodeficiency virus type 2

Query: 1 IRDEAIYHF 9
I++EA+ HF
Sbjct: 31 IKEEALKHF 39


>sp|VPR_HV2G1|PROTEIN Vpr|Human immunodeficiency virus type 2

Query: 1 IRDEAIYHF 9
I++EA+ HF
Sbjct: 31 IKEEALKHF 39




19|Sequence|91|100|IYHFRLLKDE

>sp|YONO_BPSPB|DNA-DIRECTED RNA polymerase YonO|Bacillus phage SPbeta (Bacillus phage

Query: 2 YHFRLLKD 9
YHF++L+D
Sbjct: 121 YHFQILRD 128


>sp|Y078_NPVOP|UNCHARACTERIZED 11.7 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 IYHFRLLKDE 10
IY+F +L+D+
Sbjct: 77 IYYFVILRDQ 86




20|Sequence|96|105|LLKDEIVDHW

>sp|YL798_MIMIV|UNCHARACTERIZED protein L798|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 DEIVDHW 10
DE++ HW
Sbjct: 106 DELISHW 112


>sp|Y7K8_BPP22|UNCHARACTERIZED 7.8 kDa protein in|Salmonella phage P22 (Bacteriophage P22)

Query: 1 LLKDEIVDHW 10
L+K E V HW
Sbjct: 49 LIKHERVTHW 58


>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45

Query: 2 LKDEIVDHW 10
L+D+I+DH+
Sbjct: 17 LQDKILDHY 25


>sp|BP10_BPT4|BASEPLATE wedge protein gp10|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 LLKDEIVD 8
L KDEI+D
Sbjct: 394 LTKDEIID 401


>sp|POLG_BSTV1|GENOME polyprotein|Brome streak virus (strain 11-Cal)

Query: 1 LLKDEIVDHW 10
LL E+VD W
Sbjct: 530 LLTPEVVDIW 539


>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18

Query: 2 LKDEIVDHW 10
++D+I+DH+
Sbjct: 15 VQDKIIDHY 23


>sp|LTP_PSHV1|LARGE tegument protein deneddylase|Psittacid herpesvirus 1 (isolate

Query: 1 LLKDEIVDHW 10
L DE ++HW
Sbjct: 792 LSSDENLNHW 801


>sp|L_BEFVB|RNA-DIRECTED RNA polymerase L|Bovine ephemeral fever virus (strain

Query: 4 DEIVDHW 10
DE DHW
Sbjct: 464 DEFGDHW 470


>sp|NS3B_CVCBG|NON-STRUCTURAL protein 3b|Canine coronavirus (strain BGF10) (CCoV)

Query: 2 LKDEIVDH 9
LK+E+ DH
Sbjct: 231 LKEEVEDH 238


>sp|Y060_OSHVF|UNCHARACTERIZED protein ORF60|Ostreid herpesvirus 1 (isolate France)

Query: 1 LLKDEIVDHW 10
++ D+I +HW
Sbjct: 182 VVDDDIFNHW 191




21|Sequence|101|110|IVDHWRGPEG

>sp|RDRP_ICRSV|RNA replication protein|Indian citrus ringspot virus (isolate

Query: 4 HWRGPE 9
HWRGP+
Sbjct: 230 HWRGPD 235


>sp|SHUT_ADEP3|SHUTOFF protein|Porcine adenovirus A serotype 3

Query: 4 HWRGPEG 10
HWR P G
Sbjct: 210 HWRLPSG 216


>sp|VF022_IIV6|PUTATIVE helicase 022L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 IVDHWRGPE 9
+V HW G E
Sbjct: 568 VVPHWNGSE 576


>sp|POL2_BRAV|RNA2 polyprotein|Blackcurrant reversion association virus (BRAV)

Query: 2 VDHWRGP 8
+D WRGP
Sbjct: 1282 LDLWRGP 1288


>sp|RPB7_ASFWA|DNA-DIRECTED RNA polymerase RPB7 homolog|African swine fever virus (isolate

Query: 5 WRGPEG 10
W+GP+G
Sbjct: 223 WKGPKG 228


>sp|RPB7_ASFP4|DNA-DIRECTED RNA polymerase RPB7 homolog|African swine fever virus (isolate

Query: 5 WRGPEG 10
W+GP+G
Sbjct: 223 WKGPKG 228


>sp|RPB7_ASFM2|DNA-DIRECTED RNA polymerase RPB7 homolog|African swine fever virus (isolate

Query: 5 WRGPEG 10
W+GP+G
Sbjct: 223 WKGPKG 228


>sp|RPB7_ASFK5|DNA-DIRECTED RNA polymerase RPB7 homolog|African swine fever virus (isolate

Query: 5 WRGPEG 10
W+GP+G
Sbjct: 223 WKGPKG 228


>sp|RPB7_ASFB7|DNA-DIRECTED RNA polymerase RPB7 homolog|African swine fever virus (strain

Query: 5 WRGPEG 10
W+GP+G
Sbjct: 223 WKGPKG 228


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 2 VDHWRGPEG 10
VDHW G G
Sbjct: 596 VDHWDGYHG 604


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 2 VDHWRGPEG 10
VDHW G G
Sbjct: 595 VDHWDGYHG 603


>sp|VE6_HPV22|PROTEIN E6|Human papillomavirus 22

Query: 1 IVDHWRG 7
+ DHW+G
Sbjct: 150 VRDHWKG 156


>sp|U1_TIBVC|PROTEIN U1|Tibrogargan virus (strain CS132) (TIBV)

Query: 3 DHWRGPEG 10
D WR P G
Sbjct: 63 DFWRDPTG 70


>sp|POLG_TMEVD|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 5 WRGPEG 10
WR P+G
Sbjct: 304 WRAPQG 309


>sp|POL2_TORVR|RNA2 polyprotein|Tomato ringspot virus (isolate raspberry)

Query: 2 VDHWRGP 8
+ +WRGP
Sbjct: 1510 IGYWRGP 1516


>sp|POLG_TMEVB|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 5 WRGPEG 10
WR P+G
Sbjct: 304 WRSPQG 309


>sp|NS1_AEDEV|INITIATOR protein NS1|Aedes densonucleosis virus (strain GKV

Query: 2 VDHWR 6
+DHWR
Sbjct: 11 MDHWR 15


>sp|POL_IPHA|INTRACISTERNAL A-particle Pol-related polyprotein|Hamster intracisternal

Query: 1 IVDHWRGPE 9
+ D W+GP+
Sbjct: 768 LTDLWKGPD 776


>sp|VP1_POVM3|MAJOR capsid protein VP1|Murine polyomavirus (strain A3) (MPyV)

Query: 2 VDHWRG 7
V HWRG
Sbjct: 297 VHHWRG 302


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 5 WRGPEG 10
W+GPEG
Sbjct: 2057 WQGPEG 2062


>sp|YL033_MIMIV|PUTATIVE KilA-N domain-containing protein L33|Acanthamoeba polyphaga

Query: 1 IVDHWRGPE 9
+V HW PE
Sbjct: 109 LVVHWISPE 117


>sp|GB_SUHVF|ENVELOPE glycoprotein B|Suid herpesvirus 1 (strain Indiana-Funkhauser

Query: 5 WRGPEG 10
WRGP G
Sbjct: 8 WRGPRG 13


>sp|HCP_BPT5|HEAD completion protein|Escherichia phage T5 (Enterobacteria phage

Query: 1 IVDHW 5
+VDHW
Sbjct: 127 LVDHW 131


>sp|VP1_POVMP|CAPSID protein VP1|Murine polyomavirus (strain P16 small-plaque)

Query: 2 VDHWRG 7
V HWRG
Sbjct: 297 VHHWRG 302


>sp|VP1_POVMC|MAJOR capsid protein VP1|Murine polyomavirus (strain Crawford

Query: 2 VDHWRG 7
V HWRG
Sbjct: 297 VHHWRG 302


>sp|NS2A_CVBLY|NON-STRUCTURAL protein 2a|Bovine coronavirus (strain LY-138) (BCoV)

Query: 1 IVDHWRG 7
IV HW G
Sbjct: 185 IVSHWMG 191


>sp|NS2A_CVBM|NON-STRUCTURAL protein 2a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 IVDHWRG 7
IV HW G
Sbjct: 185 IVSHWMG 191


>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 3 DHWRG 7
DHWRG
Sbjct: 175 DHWRG 179


>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 3 DHWRG 7
DHWRG
Sbjct: 175 DHWRG 179


>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 3 DHWRG 7
DHWRG
Sbjct: 175 DHWRG 179


>sp|RPOL_BPT3|DNA-DIRECTED RNA polymerase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 4 HWRGPEG 10
HW P+G
Sbjct: 727 HWTTPDG 733


>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 IVDHWRG 7
IV HW G
Sbjct: 185 IVSHWMG 191


>sp|NS2A_CVBQ|NON-STRUCTURAL protein 2a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 IVDHWRG 7
IV HW G
Sbjct: 185 IVSHWMG 191


>sp|POL_RSVSB|GAG-POL polyprotein|Rous sarcoma virus subgroup B

Query: 2 VDHWRGPEG 10
+D W PEG
Sbjct: 729 IDQWPLPEG 737


>sp|POL_RSVP|GAG-POL polyprotein|Rous sarcoma virus subgroup C

Query: 2 VDHWRGPEG 10
+D W PEG
Sbjct: 729 IDQWPLPEG 737


>sp|POL_ALVA|GAG-POL polyprotein|Avian leukosis virus subgroup A

Query: 2 VDHWRGPEG 10
+D W PEG
Sbjct: 729 IDQWPLPEG 737


>sp|POL_ALV|GAG-POL polyprotein|Avian leukosis virus (ALV)

Query: 2 VDHWRGPEG 10
+D W PEG
Sbjct: 729 IDQWPLPEG 737


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 5 WRGPEG 10
W+ PEG
Sbjct: 1781 WKSPEG 1786


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 3 DHWRGPE 9
DHW G E
Sbjct: 3012 DHWMGRE 3018


Query: 5 WRGPE 9
WRGP+
Sbjct: 888 WRGPQ 892


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 3 DHWRGPE 9
DHW G E
Sbjct: 3016 DHWMGRE 3022


Query: 5 WRGPE 9
WRGP+
Sbjct: 892 WRGPQ 896


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 3 DHWRGPE 9
DHW G E
Sbjct: 3016 DHWMGRE 3022


Query: 5 WRGPE 9
WRGP+
Sbjct: 892 WRGPQ 896


>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 2 VDHWRGP 8
V+ W+GP
Sbjct: 2763 VEEWKGP 2769


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 5 WRGPEG 10
W+ PEG
Sbjct: 1751 WKSPEG 1756




22|Sequence|106|115|RGPEGHPLHE

>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 3 PEGHPLHE 10
P+ HP HE
Sbjct: 406 PQDHPFHE 413


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 GPEGHPL 8
GP+G+PL
Sbjct: 192 GPDGYPL 198


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 GPEGHPL 8
GP+G+PL
Sbjct: 192 GPDGYPL 198


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 GPEGHPL 8
GP+G+PL
Sbjct: 192 GPDGYPL 198


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 GPEGHPL 8
GP+G+PL
Sbjct: 192 GPDGYPL 198


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 GPEGHPL 8
GP+G+PL
Sbjct: 192 GPDGYPL 198


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 GPEGHPL 8
GP+G+PL
Sbjct: 192 GPDGYPL 198


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 GPEGHPL 8
GP+G+PL
Sbjct: 192 GPDGYPL 198


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004)

Query: 2 GPEGHPL 8
GP+G+PL
Sbjct: 192 GPDGYPL 198


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 GPEGHPL 8
GP+G+PL
Sbjct: 192 GPDGYPL 198


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 GPEGHPL 8
GP+G+PL
Sbjct: 192 GPDGYPL 198


>sp|EXO74_BPE32|3'-5' exonuclease gp74|Escherichia phage Phieco32 (Escherichia coli

Query: 1 RGPEGHPLHE 10
RGP GH L +
Sbjct: 114 RGPRGHGLKQ 123


>sp|HSP7L_MIMIV|HEAT shock protein 70 homolog|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 RGPEGHPL 8
+GP G+P+
Sbjct: 493 KGPRGYPV 500


>sp|VF198_IIV6|UNCHARACTERIZED protein 198R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 GPEGHPL 8
GP G+PL
Sbjct: 432 GPNGNPL 438


>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 GPEGHPLH 9
GPEG +H
Sbjct: 420 GPEGEAIH 427


>sp|MCP_PSHV1|MAJOR capsid protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 GPEGHPLH 9
PE +PLH
Sbjct: 878 APEANPLH 885


>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)

Query: 6 HPLHE 10
HPLHE
Sbjct: 301 HPLHE 305


>sp|TAP_BPMU|PROBABLE tail assembly protein gp41|Escherichia phage Mu (Bacteriophage

Query: 2 GPEGHPLHE 10
GPE LH+
Sbjct: 7 GPEAQELHD 15


>sp|Y457_ATV|TNPB-LIKE protein ORF457|Acidianus two-tailed virus (ATV)

Query: 3 PEGHPLH 9
P+GH LH
Sbjct: 411 PKGHKLH 417


>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63

Query: 5 GHPLHE 10
GHPL+E
Sbjct: 46 GHPLYE 51


>sp|TAPFS_BPMU|PROBABLE tail assembly protein FS-gp41|Escherichia phage Mu (Bacteriophage

Query: 2 GPEGHPLHE 10
GPE LH+
Sbjct: 7 GPEAQELHD 15


>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)

Query: 1 RGPEGHPL 8
+GP+GH L
Sbjct: 384 KGPDGHIL 391


>sp|VP5_MYRV9|UNCHARACTERIZED protein VP5|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 2 GPEGHPLH 9
P HPLH
Sbjct: 365 APLSHPLH 372


>sp|RIR1_SUHVK|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Suid herpesvirus 1 (strain Kaplan)

Query: 3 PEGHPL 8
P GHPL
Sbjct: 740 PAGHPL 745


>sp|VGA8_ALHV1|UNCHARACTERIZED gene A8 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 PEGHPLH 9
PE HP H
Sbjct: 635 PEDHPHH 641


>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 GPEGHPLH 9
GPEG +H
Sbjct: 420 GPEGEVIH 427


>sp|YOQW_BPSPB|ABASIC site processing protein YoqW|Bacillus phage SPbeta (Bacillus phage

Query: 3 PEGHPLH 9
PEG+PL+
Sbjct: 140 PEGNPLY 146


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 2 GPEGHPLHE 10
G HP+HE
Sbjct: 2142 GNPSHPIHE 2150


>sp|1108L_ASFK5|PROTEIN MGF 110-8L|African swine fever virus (isolate

Query: 2 GPEGHPLHE 10
GP GH HE
Sbjct: 91 GPRGHIDHE 99




23|Sequence|111|120|HPLHEVLLEQ

>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)

Query: 1 HPLHEVL 7
HPLHEV+
Sbjct: 301 HPLHEVV 307


>sp|POL2_BRSV|RNA2 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 1 HPLHEVLLEQ 10
+PLHE +LE+
Sbjct: 188 NPLHEWILEE 197


>sp|YL410_MIMIV|PUTATIVE core protein L410|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 PLHEVL 7
PLHE+L
Sbjct: 100 PLHEIL 105


>sp|DPOL_BPT4|DNA-DIRECTED DNA polymerase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 HPLHEVL 7
HP+HE +
Sbjct: 434 HPIHEYI 440


>sp|MVP_BTMV|P3N-PIPO polyprotein|Beet mosaic virus (BtMV)

Query: 1 HPLHEV 6
HP+HE+
Sbjct: 999 HPIHEL 1004


>sp|POLS_AURAV|STRUCTURAL polyprotein|Aura virus (AURAV)

Query: 1 HPLHEVLLE 9
HP ++VLL+
Sbjct: 308 HPSYDVLLD 316




24|Sequence|116|125|VLLEQAKVVW

>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 2 LLEQAKVVW 10
LLEQ KV W
Sbjct: 1138 LLEQFKVKW 1146


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2 LLEQAKVVW 10
LLEQ KV W
Sbjct: 1138 LLEQFKVKW 1146


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2 LLEQAKVVW 10
LLEQ KV W
Sbjct: 1138 LLEQFKVKW 1146


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 LLEQAKVVW 10
L QAK+VW
Sbjct: 1736 LTTQAKMVW 1744


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 LLEQAKVVW 10
L QAK+VW
Sbjct: 1736 LTTQAKMVW 1744


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2 LLEQAKVVW 10
++EQ KV W
Sbjct: 1135 MIEQFKVFW 1143


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2 LLEQAKVVW 10
++EQ KV W
Sbjct: 1135 MIEQFKVFW 1143




25|Sequence|121|130|AKVVWQFRGK

>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 1 AKVVWQFRGK 10
A+V W F+GK
Sbjct: 1066 AEVPWAFKGK 1075


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 1 AKVVWQFRGK 10
A+V W F+GK
Sbjct: 1066 AEVPWAFKGK 1075


>sp|RPOB_NPVOP|PROBABLE DNA-directed RNA polymerase subunit|Orgyia pseudotsugata

Query: 1 AKVVWQFRGK 10
AK+VW GK
Sbjct: 663 AKIVWAHDGK 672


>sp|FIB37_BPT2|LONG tail fiber protein Gp37|Enterobacteria phage T2 (Bacteriophage T2)

Query: 1 AKVVWQFR 8
A + WQFR
Sbjct: 761 ADLAWQFR 768


>sp|POL_FLV|GAG-POL polyprotein|Feline leukemia virus

Query: 5 WQFRGK 10
W++RGK
Sbjct: 1333 WEYRGK 1338


>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 VVWQFRGK 10
VVW+ RGK
Sbjct: 150 VVWEQRGK 157




26|Sequence|126|135|QFRGKEDLDK

>sp|RDRP_NMV|RNA replication protein|Narcissus mosaic virus (NMV)

Query: 2 FRGKEDLDK 10
F+GK+D DK
Sbjct: 385 FKGKQDFDK 393


>sp|RDRP_BANNV|RNA-DIRECTED RNA polymerase VP1|Banna virus (BAV)

Query: 1 QFRGKEDLD 9
QF G +DLD
Sbjct: 422 QFNGTKDLD 430


>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 3 RGKEDLDK 10
RG+EDL+K
Sbjct: 59 RGEEDLNK 66


>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)

Query: 3 RGKEDLDK 10
RG+EDL+K
Sbjct: 59 RGEEDLNK 66


>sp|DPOL_BPSP2|DNA polymerase|Bacillus phage SP02 (Bacteriophage SP02)

Query: 3 RGKEDLDK 10
RGK +LDK
Sbjct: 611 RGKNELDK 618




27|Sequence|131|140|EDLDKWTVTS

>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate

Query: 1 EDLDKWTV 8
EDLDKW V
Sbjct: 884 EDLDKWFV 891


>sp|R1A_LIYV9|REPLICASE polyprotein 1a|Lettuce infectious yellows virus (isolate

Query: 1 EDLDKWTV 8
EDLDKW V
Sbjct: 884 EDLDKWFV 891


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 DLDKWTVTS 10
DLD+W+V +
Sbjct: 897 DLDEWSVAT 905


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 DLDKWTVTS 10
DLD+W+V +
Sbjct: 897 DLDEWSVAT 905


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 DLDKWTVTS 10
DLD+W+V +
Sbjct: 897 DLDEWSVAT 905


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 DLDKWTVTS 10
DLD+W+V +
Sbjct: 897 DLDEWSVAT 905


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 DLDKWTVTS 10
DLD+W+V +
Sbjct: 897 DLDEWSVAT 905


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 DLDKWTVTS 10
DLD+W+V +
Sbjct: 897 DLDEWSVAT 905


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004)

Query: 2 DLDKWTVTS 10
DLD+W+V +
Sbjct: 897 DLDEWSVAT 905


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 DLDKWTVTS 10
DLD+W+V +
Sbjct: 897 DLDEWSVAT 905


>sp|RDRP_PVSP|RNA replication protein|Potato virus S (strain Peruvian)

Query: 1 EDLDKWTVTS 10
E+L+KW + S
Sbjct: 124 EELNKWVIES 133


>sp|SPIKE_CVRSD|SPIKE glycoprotein|Rat coronavirus (strain 681) (RCV-SDAV)

Query: 1 EDLDKW 6
E+LDKW
Sbjct: 1237 EELDKW 1242


>sp|SPIKE_CVMJH|SPIKE glycoprotein|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 EDLDKW 6
E+LDKW
Sbjct: 1112 EELDKW 1117


>sp|SPIKE_CVMJC|SPIKE glycoprotein|Murine coronavirus (strain JHMV /

Query: 1 EDLDKW 6
E+LDKW
Sbjct: 1253 EELDKW 1258


>sp|SPIKE_CVMA5|SPIKE glycoprotein|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 EDLDKW 6
E+LDKW
Sbjct: 1201 EELDKW 1206


>sp|SPIKE_CVM4|SPIKE glycoprotein|Murine coronavirus (strain 4) (MHV-4)

Query: 1 EDLDKW 6
E+LDKW
Sbjct: 1253 EELDKW 1258


>sp|VE4_HPV29|PROTEIN E4|Human papillomavirus 29

Query: 1 EDLDKWTVTS 10
E +D+WTVT
Sbjct: 79 ERVDQWTVTG 88


>sp|REP_TYLCC|REPLICATION-ASSOCIATED protein|Tomato yellow leaf curl China

Query: 1 EDLDKWTV 8
E+LD+W V
Sbjct: 194 EELDEWAV 201


>sp|POLS_DXV96|STRUCTURAL polyprotein|Drosophila x virus (isolate Chung/1996)

Query: 4 DKWTVTS 10
D+WTVT+
Sbjct: 240 DEWTVTA 246


>sp|RDRP_GVAIS|RNA replication protein|Grapevine virus A (isolate Is

Query: 2 DLDKWTVT 9
DLDKW T
Sbjct: 1457 DLDKWAKT 1464


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 DLDKWTVTS 10
DLD+W++ +
Sbjct: 896 DLDEWSMAT 904


>sp|REV_JEMBR|PROTEIN Rev|Jembrana disease virus (JDV)

Query: 1 EDLDKWTV 8
E LD+WT+
Sbjct: 36 EALDRWTL 43


>sp|CP83_BP186|UNCHARACTERIZED 10.4 kDa protein in|Escherichia phage 186 (Bacteriophage 186)

Query: 4 DKWTVTS 10
DKW +TS
Sbjct: 9 DKWVITS 15


>sp|RPC1_BPP7|REPRESSOR protein C1|Enterobacteria phage P7 (Bacteriophage P7)

Query: 2 DLDKWTVTS 10
++DKWT+ +
Sbjct: 58 EIDKWTLMA 66


>sp|RPC1_BPP1|REPRESSOR protein C1|Escherichia phage P1 (Bacteriophage P1)

Query: 2 DLDKWTVTS 10
++DKWT+ +
Sbjct: 58 EIDKWTLMA 66


>sp|RNC_IIV3|PUTATIVE ribonuclease 3|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 EDLDKWTVTS 10
EDL WT S
Sbjct: 169 EDLGMWTFIS 178


>sp|MUZZL_BPCA1|MUZZLE protein|Bacteroides phage crAss001 (Bacteroides phage

Query: 1 EDLDKWT 7
ED+D WT
Sbjct: 1042 EDIDTWT 1048


>sp|YL560_MIMIV|UNCHARACTERIZED HNH endonuclease L560|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 LDKWTVTS 10
LDKW + S
Sbjct: 50 LDKWPIVS 57


>sp|VF143_IIV6|PUTATIVE kinase protein 143R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 EDLDKWTV 8
E +DKWT+
Sbjct: 31 EPIDKWTL 38




28|Sequence|136|145|WTVTSDKTIG

>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 1 WTVTSDKT 8
W+VTSD+T
Sbjct: 1609 WSVTSDET 1616


>sp|RDRP_GVAIS|RNA replication protein|Grapevine virus A (isolate Is

Query: 1 WTVTSDKTIG 10
WT+T +TIG
Sbjct: 256 WTITKLQTIG 265


>sp|DPOL_BPAPS|PROBABLE DNA polymerase|Acyrthosiphon pisum secondary endosymbiont phage

Query: 1 WTVTSDKTI 9
W VT DKT+
Sbjct: 45 WDVTQDKTM 53


>sp|YL269_MIMIV|UNCHARACTERIZED protein L269|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WTVTSDKTI 9
W+ T+DK I
Sbjct: 62 WSFTTDKNI 70


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 WTVTSDKTI 9
W+ TSDK +
Sbjct: 874 WSTTSDKNL 882


>sp|YL294_MIMIV|UNCHARACTERIZED protein L294|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 VTSDKTIG 10
+T DKTIG
Sbjct: 575 ITDDKTIG 582


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 WTVTSDKTI 9
W+ TSDK +
Sbjct: 871 WSTTSDKNL 879


>sp|SPAC_BPT4|PROTEIN spackle|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 WTVTSDKT 8
W++T+D+T
Sbjct: 31 WSMTADQT 38


>sp|P2_PBCV1|MINOR capsid protein P2|Paramecium bursaria Chlorella virus 1

Query: 3 VTSDKTIG 10
VTSD T+G
Sbjct: 161 VTSDGTVG 168


>sp|RDRP_HASV|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Helicoverpa armigera stunt virus (HaSV)

Query: 1 WTVTSD 6
WTVT D
Sbjct: 1009 WTVTED 1014


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 1 WTVTSDKTI 9
WT + D T+
Sbjct: 1626 WTASEDSTV 1634


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 1 WTVTSDKTI 9
WT + D T+
Sbjct: 1626 WTASEDSTV 1634


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 1 WTVTSDKTI 9
WT + D T+
Sbjct: 1626 WTASEDSTV 1634


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 1 WTVTSDKTIG 10
W+ +DK+IG
Sbjct: 1891 WSELNDKSIG 1900


>sp|GLYC_EMARV|ENVELOPE glycoprotein|European mountain ash ringspot-associated virus

Query: 3 VTSDKTI 9
+TSDKT+
Sbjct: 395 ITSDKTV 401


>sp|RPOLV_BPN4|VIRION DNA-directed RNA polymerase|Enterobacteria phage N4 (Bacteriophage

Query: 1 WTVTSDKTI 9
WT DKTI
Sbjct: 2208 WTNFDDKTI 2216


>sp|SPIKE_BC133|SPIKE glycoprotein|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 WTVTSDKT 8
W +T+D+T
Sbjct: 248 WDITADET 255




29|Sequence|141|150|DKTIGGRSEV

>sp|OBP_EHV1V|REPLICATION origin-binding protein|Equine herpesvirus 1 (strain V592)

Query: 1 DKTIGGRSE 9
D T+GGR+E
Sbjct: 33 DTTLGGRAE 41


>sp|OBP_EHV1B|REPLICATION origin-binding protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 DKTIGGRSE 9
D T+GGR+E
Sbjct: 33 DTTLGGRAE 41


>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1

Query: 2 KTIGGR 7
KTIGGR
Sbjct: 376 KTIGGR 381


>sp|028R_IIV3|UNCHARACTERIZED protein 028R|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 TIGGRSE 9
TIGGR E
Sbjct: 283 TIGGRGE 289




30|Sequence|146|155|GRSEVFLKMG

>sp|CFXQ_MIMIV|PUTATIVE cfxQ-like protein R730|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 SEVFLKMG 10
+E++LKMG
Sbjct: 187 AEIYLKMG 194


>sp|L_SHRV|RNA-DIRECTED RNA polymerase L|Snakehead rhabdovirus (SHRV)

Query: 3 SEVFLKMG 10
S VFLK+G
Sbjct: 1842 SSVFLKLG 1849


>sp|PR73_MMTVC|PROTEIN PR73|Mouse mammary tumor virus (strain

Query: 1 GRSEVFLKMG 10
G+ VF+K+G
Sbjct: 192 GKKSVFVKIG 201


>sp|PR73_MMTVG|PROTEIN PR73|Mouse mammary tumor virus (strain

Query: 1 GRSEVFLKMG 10
G+ VF+K+G
Sbjct: 193 GKKSVFVKIG 202




31|Sequence|151|160|FLKMGKNNQS

>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain

Query: 2 LKMGKNN 8
LKMG+NN
Sbjct: 937 LKMGENN 943


>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4

Query: 1 FLKMGKN 7
FLKMGK+
Sbjct: 235 FLKMGKD 241


>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 1 FLKMGKN 7
F+K+GKN
Sbjct: 142 FIKLGKN 148




32|Sequence|156|165|KNNQSALLYG

>sp|Y058_OSHVF|UNCHARACTERIZED protein ORF58|Ostreid herpesvirus 1 (isolate France)

Query: 1 KNNQSALLYG 10
KN + +LYG
Sbjct: 193 KNKEDGILYG 202




33|Sequence|161|170|ALLYGTLSSE

>sp|TOP2_IIV6|DNA topoisomerase 2|Invertebrate iridescent virus 6 (IIV-6)

Query: 4 YGTLSSE 10
YGTLS+E
Sbjct: 909 YGTLSNE 915


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 1 ALLYGTLSSE 10
+LLY TLS E
Sbjct: 890 SLLYDTLSEE 899




34|Sequence|166|175|TLSSEAPQDG

***** No hits found ******


35|Sequence|171|180|APQDGESTRS

>sp|PKG1_ADEG1|PACKAGING protein 1|Fowl adenovirus A serotype 1

Query: 2 PQDGESTRS 10
P DG TRS
Sbjct: 26 PYDGNPTRS 34




36|Sequence|176|185|ESTRSGYCAM

>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12

Query: 1 ESTRSGYCA 9
ES ++GYCA
Sbjct: 693 ESRKTGYCA 701


>sp|POLG_FMDV1|GENOME polyprotein|Foot-and-mouth disease virus (strain A10/Holland/1961

Query: 2 STRSGYCA 9
+TR+GYC
Sbjct: 1806 ATRAGYCG 1813


>sp|POLG_FMDVP|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 STRSGYCA 9
ST++GYC
Sbjct: 1796 STKAGYCG 1803


>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate

Query: 3 TRSGYCAM 10
TR GYC +
Sbjct: 1098 TRRGYCGL 1105


>sp|POLG_FMDA1|GENOME polyprotein|Foot-and-mouth disease virus serotype Asia-1

Query: 3 TRSGYCA 9
TR+GYC
Sbjct: 1804 TRAGYCG 1810


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 3 TRSGYCA 9
T+SGYC
Sbjct: 1649 TKSGYCG 1655


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 3 TRSGYCA 9
T+SGYC
Sbjct: 1652 TKSGYCG 1658


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 3 TRSGYCA 9
T+SGYC
Sbjct: 1656 TKSGYCG 1662


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 3 TRSGYCA 9
T+SGYC
Sbjct: 1656 TKSGYCG 1662


>sp|CAPSD_BBMV|CAPSID protein|Broad bean mottle virus

Query: 3 TRSGYC 8
TR+GYC
Sbjct: 46 TRTGYC 51


>sp|DPOL_WHV4|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 ESTRSGYCA 9
+STR+G C+
Sbjct: 239 KSTRTGLCS 247


>sp|DPOL_WHV5|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 ESTRSGYCA 9
+STR+G C+
Sbjct: 239 KSTRTGLCS 247


>sp|DPOL_WHV3|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 ESTRSGYCA 9
+STR+G C+
Sbjct: 239 KSTRTGLCS 247


>sp|DPOL_WHV2|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 ESTRSGYCA 9
+STR+G C+
Sbjct: 238 KSTRTGLCS 246


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 1 ESTRSGYCA 9
+S RSG+C
Sbjct: 1110 QSKRSGFCG 1118


>sp|POLS_AURAV|STRUCTURAL polyprotein|Aura virus (AURAV)

Query: 1 ESTRSGYCAM 10
ES R+G CA+
Sbjct: 1126 ESDRAGQCAV 1135


>sp|NS1_MUMIP|INITIATOR protein NS1|Murine minute virus (strain MVM

Query: 1 ESTRSGYCA 9
+ST + YCA
Sbjct: 544 QSTMASYCA 552


>sp|NS1_MUMIM|INITIATOR protein NS1|Murine minute virus (strain MVMi)

Query: 1 ESTRSGYCA 9
+ST + YCA
Sbjct: 544 QSTMASYCA 552


>sp|019R_FRG3G|PUTATIVE serine/threonine-protein kinase 019R|Frog virus 3 (isolate Goorha)

Query: 4 RSGYCA 9
RSG+CA
Sbjct: 440 RSGFCA 445




37|Sequence|181|190|GYCAMISRIP

>sp|VP2_AHSV3|OUTER capsid protein VP2|African horse sickness virus 3

Query: 2 YCAMISR 8
+CAMISR
Sbjct: 807 FCAMISR 813


>sp|POLG_FMDVZ|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 GYCAMISR 8
GYC+ +SR
Sbjct: 1839 GYCSCVSR 1846


>sp|POLG_FMDVT|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 GYCAMISR 8
GYC+ +SR
Sbjct: 1833 GYCSCVSR 1840


>sp|POLG_FMDVS|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 GYCAMISR 8
GYC+ +SR
Sbjct: 1833 GYCSCVSR 1840


>sp|POLG_FMDVP|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 GYCAMISR 8
GYC+ +SR
Sbjct: 1828 GYCSCVSR 1835


>sp|POLG_FMDVO|GENOME polyprotein|Foot-and-mouth disease virus serotype O

Query: 1 GYCAMISR 8
GYC+ +SR
Sbjct: 1838 GYCSCVSR 1845


>sp|POLG_FMDVI|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 GYCAMISR 8
GYC+ +SR
Sbjct: 1834 GYCSCVSR 1841


>sp|POLG_FMDVC|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 GYCAMISR 8
GYC+ +SR
Sbjct: 1839 GYCSCVSR 1846


>sp|POLG_FMDVA|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 GYCAMISR 8
GYC+ +SR
Sbjct: 1839 GYCSCVSR 1846


>sp|POLG_FMDV5|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 GYCAMISR 8
GYC+ +SR
Sbjct: 1838 GYCSCVSR 1845


>sp|POLG_FMDV1|GENOME polyprotein|Foot-and-mouth disease virus (strain A10/Holland/1961

Query: 1 GYCAMISR 8
GYC+ +SR
Sbjct: 1838 GYCSCVSR 1845


>sp|POLG_FMDA1|GENOME polyprotein|Foot-and-mouth disease virus serotype Asia-1

Query: 1 GYCAMISR 8
GYC+ +SR
Sbjct: 1835 GYCSCVSR 1842


>sp|TRM1_EHV1V|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain V592)

Query: 1 GYCAMISR 8
G+CA +SR
Sbjct: 544 GFCAAVSR 551


>sp|TRM1_EHV1B|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain Ab4p)

Query: 1 GYCAMISR 8
G+CA +SR
Sbjct: 544 GFCAAVSR 551


>sp|TRM1_EHV1|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain HVS25A)

Query: 1 GYCAMISR 8
G+CA +SR
Sbjct: 544 GFCAAVSR 551


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 2 YCAMISRIP 10
+C M+S +P
Sbjct: 1286 FCQMVSSVP 1294


>sp|POLG_PEV9U|GENOME polyprotein|Porcine enterovirus 9 (strain UKG/410/73)

Query: 1 GYCAMISRIP 10
+C M+S +P
Sbjct: 1273 AFCQMVSTVP 1282


>sp|DPOL_NPVCF|DNA polymerase|Choristoneura fumiferana nuclear polyhedrosis virus

Query: 1 GYCAMISRI 9
G+CA +SR+
Sbjct: 471 GFCAGMSRL 479


>sp|YL072_MIMIV|PUTATIVE ankyrin repeat protein L72|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 YCAMISRI 9
YC MIS I
Sbjct: 235 YCLMISTI 242




38|Sequence|186|195|ISRIPRGAFE

>sp|MATRX_CDVO|MATRIX protein|Canine distemper virus (strain Onderstepoort)

Query: 3 RIPRGAFE 10
RIPRG FE
Sbjct: 172 RIPRGVFE 179


>sp|MATRX_PHODV|MATRIX protein|Phocine distemper virus (PDV)

Query: 3 RIPRGAFE 10
RIPRG F+
Sbjct: 172 RIPRGMFD 179


>sp|EA59_LAMBD|PROTEIN ea59|Escherichia phage lambda (Bacteriophage lambda)

Query: 2 SRIPRGAF 9
SRIP+G F
Sbjct: 231 SRIPKGYF 238


>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain

Query: 1 ISRIPRGAFE 10
+SR+PR F+
Sbjct: 15 LSRLPRSRFQ 24


>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain

Query: 1 ISRIPRGAFE 10
+SR+PR F+
Sbjct: 15 LSRLPRSRFQ 24


>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain

Query: 3 RIPRGAFE 10
RIPRGA
Sbjct: 754 RIPRGALH 761


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 3 RIPRGAFE 10
RIPRGA
Sbjct: 754 RIPRGALH 761




39|Sequence|191|200|RGAFERKMSY

>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 RGAFERKMS 9
RG FERKMS
Sbjct: 1710 RGHFERKMS 1718


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 RGAFERKMS 9
RG FERKMS
Sbjct: 1710 RGHFERKMS 1718


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 RGAFERKMS 9
RG FERKMS
Sbjct: 1710 RGHFERKMS 1718


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 RGAFERKMS 9
RG FERKMS
Sbjct: 1710 RGHFERKMS 1718


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 RGAFERKMS 9
RG FE+KMS
Sbjct: 1712 RGHFEKKMS 1720


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 RGAFERKMS 9
RG FE+KMS
Sbjct: 1712 RGHFEKKMS 1720




40|Sequence|196|205|RKMSYDWSQF

>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 RKMSYDWSQF 10
R+M+YDWS +
Sbjct: 2140 REMNYDWSLY 2149


>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 RKMSYDWSQF 10
R+M+YDWS +
Sbjct: 2149 REMNYDWSLY 2158


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 1 RKMSYDWSQF 10
R+M+YDWS +
Sbjct: 2230 REMNYDWSLY 2239


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 RKMSYDWSQF 10
R+M+YDWS +
Sbjct: 2140 REMNYDWSLY 2149


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 RKMSYDWSQF 10
R+M+YDWS +
Sbjct: 2140 REMNYDWSLY 2149


>sp|DPOL_ICHVA|DNA polymerase|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 MSYDWSQ 9
M YDWS+
Sbjct: 675 MGYDWSK 681


>sp|UL52_EHV4|DNA helicase/primase complex protein|Equine herpesvirus 4 (strain

Query: 3 MSYDWS 8
+SYDWS
Sbjct: 40 ISYDWS 45


>sp|PRIM_EHV1V|DNA primase|Equine herpesvirus 1 (strain V592)

Query: 3 MSYDWS 8
+SYDWS
Sbjct: 40 ISYDWS 45


>sp|PRIM_EHV1B|DNA primase|Equine herpesvirus 1 (strain Ab4p)

Query: 3 MSYDWS 8
+SYDWS
Sbjct: 40 ISYDWS 45


>sp|Y012_SFAVA|UNCHARACTERIZED protein ORF12|Spodoptera frugiperda ascovirus 1a (SfAV-1a)

Query: 5 YDWSQF 10
YDWS F
Sbjct: 123 YDWSNF 128


>sp|C_HENDH|PROTEIN C|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 2 KMSYDWSQF 10
+M+Y+W+Q+
Sbjct: 95 QMTYNWTQW 103


>sp|C_NIPAV|PROTEIN C|Nipah virus

Query: 2 KMSYDWSQF 10
+M+Y+W+Q+
Sbjct: 95 QMTYNWTQW 103


>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 2 KMSYDWSQ 9
+MS+DW++
Sbjct: 251 EMSFDWNE 258




41|Sequence|201|210|DWSQFNTLYL

>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 DWSQFNTLYL 10
DW +FNT YL
Sbjct: 794 DWLRFNTAYL 803


>sp|VF1_MNV1|VIRULENCE factor 1|Norovirus (isolate Mouse/NoV/United States/MNV1/2002/GV)

Query: 2 WSQFNTLYL 10
WS FN+L+L
Sbjct: 150 WSPFNSLFL 158


>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)

Query: 2 WSQFNTLY 9
WSQFNT +
Sbjct: 97 WSQFNTYW 104


>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)

Query: 2 WSQFNTLY 9
WSQFNT +
Sbjct: 97 WSQFNTYW 104


>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)

Query: 2 WSQFNTLY 9
WSQFNT +
Sbjct: 97 WSQFNTYW 104


>sp|RDRP_HASV|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Helicoverpa armigera stunt virus (HaSV)

Query: 1 DWSQFNTLY 9
DW++F+T +
Sbjct: 1132 DWTEFDTAH 1140


>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)

Query: 2 WSQFNTLY 9
WSQFN+ +
Sbjct: 97 WSQFNSYW 104


>sp|CATV_NPVOP|VIRAL cathepsin|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 1 DWSQFNTL 8
DW QFN +
Sbjct: 118 DWRQFNKV 125


>sp|SPIKE_ADEB3|FIBER protein|Bovine adenovirus B serotype 3

Query: 2 WSQFNTL 8
W +FNT+
Sbjct: 954 WQEFNTI 960


>sp|DPOL_ALHV1|DNA polymerase catalytic subunit|Alcelaphine herpesvirus 1 (strain

Query: 1 DWSQFNTL 8
DW Q+N L
Sbjct: 307 DWPQYNIL 314


>sp|RDRP_LDCPR|RNA-DIRECTED RNA polymerase VP2|Lymantria dispar cypovirus 1 (isolate

Query: 2 WSQFNTL 8
WSQFN +
Sbjct: 272 WSQFNEI 278


>sp|YR849_MIMIV|UNCHARACTERIZED protein R849|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 WSQFNTLYL 10
W F+T+YL
Sbjct: 86 WRDFDTIYL 94


>sp|RDRP_PCVC|RNA-DIRECTED RNA polymerase|Penicillium chrysogenum virus (isolate Caston/2003)

Query: 1 DWSQFNTLYL 10
DW NTL+
Sbjct: 132 DWHDHNTLWF 141




42|Sequence|206|215|NTLYLRVRGD

>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 1 NTLYLRVRGD 10
+ ++LRVRGD
Sbjct: 1822 DEVFLRVRGD 1831


>sp|PRIM_ASFM2|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate

Query: 1 NTLYLRVRGD 10
NTL LRV G+
Sbjct: 309 NTLILRVTGN 318


>sp|PRIM_ASFWA|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate

Query: 1 NTLYLRVRGD 10
NTL LRV G+
Sbjct: 315 NTLILRVTGN 324


>sp|PRIM_ASFP4|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate

Query: 1 NTLYLRVRGD 10
NTL LRV G+
Sbjct: 315 NTLILRVTGN 324


>sp|PRIM_ASFB7|PUTATIVE helicase/primase complex protein|African swine fever virus (strain

Query: 1 NTLYLRVRGD 10
NTL LRV G+
Sbjct: 315 NTLILRVTGN 324


>sp|POLS_BSNV|STRUCTURAL polyprotein|Blotched snakehead virus (BSNV) (Channa

Query: 3 LYLRVRGD 10
LY+ VRGD
Sbjct: 603 LYIAVRGD 610


>sp|PRIM_ASFK5|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate

Query: 1 NTLYLRVRGD 10
NTL LRV G+
Sbjct: 304 NTLILRVAGN 313


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 4 YLRVRG 9
YLRVRG
Sbjct: 1481 YLRVRG 1486


>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United

Query: 4 YLRVRG 9
YLRVRG
Sbjct: 1481 YLRVRG 1486




43|Sequence|211|220|RVRGDGRPWM

>sp|NCAP_NDVB1|NUCLEOPROTEIN disease virus (strain Chicken/United

Query: 1 RVRGDGRPWM 10
R++GD P+M
Sbjct: 302 RMKGDNAPYM 311


>sp|NCAP_NCDV|NUCLEOPROTEIN paramyxovirus 1 (NDV) (Avian

Query: 1 RVRGDGRPWM 10
R++GD P+M
Sbjct: 302 RMKGDNAPYM 311


>sp|DYR_BPT4|DIHYDROFOLATE reductase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 4 GDGRPW 9
GDG PW
Sbjct: 25 GDGLPW 30


>sp|NRAM_I79A7|NEURAMINIDASE A virus (strain A/Grey

Query: 3 RGDGRPWM 10
RG RPW+
Sbjct: 296 RGSNRPWI 303


>sp|NRAM_I68A3|NEURAMINIDASE A virus (strain A/Turkey/Ontario/6118/1968

Query: 3 RGDGRPWM 10
RG RPW+
Sbjct: 296 RGSNRPWI 303


>sp|RDRP_LDCPR|RNA-DIRECTED RNA polymerase VP2|Lymantria dispar cypovirus 1 (isolate

Query: 1 RVRGDGRPW 9
+V+G GR W
Sbjct: 248 KVKGIGRSW 256


>sp|RDRP_AHSV|RNA-DIRECTED RNA polymerase|African horse sickness virus (AHSV)

Query: 2 VRGDGRPWM 10
+RG+ R WM
Sbjct: 948 MRGECRAWM 956


>sp|V_NDVU2|NON-STRUCTURAL protein V|Newcastle disease virus (strain Ulster/2C)

Query: 4 GDGRPW 9
G GRPW
Sbjct: 168 GQGRPW 173


>sp|HEMA_CVRSD|HEMAGGLUTININ-ESTERASE coronavirus (strain 681) (RCV-SDAV)

Query: 2 VRGDGRPWM 10
V GD WM
Sbjct: 120 VEGDNNKWM 128


>sp|PURZ_BPVC8|N6-SUCCINO-2-AMINO-2'-DEOXYADENYLATE synthase|Vibrio phage phiVC8

Query: 2 VRGDGRPWM 10
+ +GR WM
Sbjct: 46 INAEGRKWM 54


>sp|RDRP_DXV96|RNA-DIRECTED RNA polymerase|Drosophila x virus (isolate Chung/1996)

Query: 3 RGDGRPW 9
+G G PW
Sbjct: 507 QGSGNPW 513


>sp|KILA_BPP1|PROTEIN kilA|Escherichia phage P1 (Bacteriophage P1)

Query: 1 RVRGDGRPWM 10
R+ G G+ W+
Sbjct: 240 RITGKGQQWL 249




44|Sequence|216|225|GRPWMVNIKE

>sp|RDRP_PMVK|RNA-DIRECTED RNA polymerase|Panicum mosaic virus (strain United

Query: 1 GRPWMVNIKE 10
G+PWM ++ E
Sbjct: 119 GQPWMKSLNE 128


>sp|CAPSD_CNV|CAPSID protein|Cucumber necrosis virus (CNV)

Query: 3 PWMVNI 8
PW+VNI
Sbjct: 135 PWLVNI 140


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 3 PWMVNI 8
PW+VNI
Sbjct: 1624 PWVVNI 1629


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 3 PWMVNI 8
PW+VNI
Sbjct: 1624 PWVVNI 1629


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 3 PWMVNI 8
PW+VNI
Sbjct: 1624 PWVVNI 1629


>sp|L_BRSVA|RNA-DIRECTED RNA polymerase L|Bovine respiratory syncytial virus (strain

Query: 3 PWMVNI 8
PW+VNI
Sbjct: 1621 PWVVNI 1626


>sp|YR350_MIMIV|PUTATIVE ATP-dependent RNA helicase R350|Acanthamoeba polyphaga mimivirus

Query: 3 PWMVNIKE 10
PWM ++KE
Sbjct: 144 PWMQDLKE 151


>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain

Query: 2 RPWMVNIKE 10
RPW V +E
Sbjct: 118 RPWRVETRE 126


>sp|RDRP_AHSV|RNA-DIRECTED RNA polymerase|African horse sickness virus (AHSV)

Query: 1 GRPWMVN 7
GR W+VN
Sbjct: 382 GRAWVVN 388


>sp|CAPSD_TTVD1|CAPSID protein|Torque teno tupaia virus (isolate

Query: 2 RPWMVNIKE 10
RPWM +I +
Sbjct: 229 RPWMADISK 237


>sp|L_MPV15|RNA-DIRECTED RNA polymerase L|Murine pneumonia virus (strain 15)

Query: 3 PWMVNI 8
PW+VN+
Sbjct: 1563 PWVVNV 1568


>sp|PRIM_GAHVM|DNA primase|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 GRPWMVNIKE 10
G PWM++ E
Sbjct: 719 GAPWMLHDAE 728


>sp|SHDAG_HDVL1|SMALL delta antigen|Hepatitis delta virus genotype I

Query: 3 PWMVNIK 9
PW+ NIK
Sbjct: 49 PWLGNIK 55


>sp|SHDAG_HDVD3|SMALL delta antigen|Hepatitis delta virus genotype I

Query: 3 PWMVNIK 9
PW+ NIK
Sbjct: 49 PWLGNIK 55


>sp|SHDAG_HDVAM|SMALL delta antigen|Hepatitis delta virus genotype I

Query: 3 PWMVNIK 9
PW+ NIK
Sbjct: 49 PWLGNIK 55


>sp|SHDAG_HDVU2|SMALL delta antigen|Hepatitis delta virus genotype I

Query: 3 PWMVNIK 9
PW+ NIK
Sbjct: 49 PWLGNIK 55


>sp|SHDAG_HDVNA|SMALL delta antigen|Hepatitis delta virus genotype I

Query: 3 PWMVNIK 9
PW+ NIK
Sbjct: 49 PWLGNIK 55


>sp|SHDAG_HDV27|SMALL delta antigen|Hepatitis delta virus genotype I

Query: 3 PWMVNIK 9
PW+ NIK
Sbjct: 49 PWLGNIK 55


>sp|SHDAG_HDVIT|SMALL delta antigen|Hepatitis delta virus genotype I

Query: 3 PWMVNIK 9
PW+ NIK
Sbjct: 49 PWLGNIK 55


>sp|SHDAG_HDVWO|SMALL delta antigen|Hepatitis delta virus genotype I

Query: 3 PWMVNIK 9
PW+ NIK
Sbjct: 49 PWLGNIK 55


>sp|LHDAG_HDVL1|LARGE delta antigen|Hepatitis delta virus genotype I

Query: 3 PWMVNIK 9
PW+ NIK
Sbjct: 49 PWLGNIK 55


>sp|LHDAG_HDVD3|LARGE delta antigen|Hepatitis delta virus genotype I

Query: 3 PWMVNIK 9
PW+ NIK
Sbjct: 49 PWLGNIK 55


>sp|LHDAG_HDVAM|LARGE delta antigen|Hepatitis delta virus genotype I

Query: 3 PWMVNIK 9
PW+ NIK
Sbjct: 49 PWLGNIK 55


>sp|VL1_PCPV1|MAJOR capsid protein L1|Pygmy chimpanzee papillomavirus type 1

Query: 4 WMVNIKE 10
W VN+KE
Sbjct: 445 WEVNLKE 451


>sp|LHDAG_HDVU2|LARGE delta antigen|Hepatitis delta virus genotype I

Query: 3 PWMVNIK 9
PW+ NIK
Sbjct: 49 PWLGNIK 55


>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58

Query: 4 WMVNIKE 10
W VN+KE
Sbjct: 472 WEVNLKE 478


>sp|LHDAG_HDVNA|LARGE delta antigen|Hepatitis delta virus genotype I

Query: 3 PWMVNIK 9
PW+ NIK
Sbjct: 49 PWLGNIK 55


>sp|LHDAG_HDVIT|LARGE delta antigen|Hepatitis delta virus genotype I

Query: 3 PWMVNIK 9
PW+ NIK
Sbjct: 49 PWLGNIK 55


>sp|LHDAG_HDVWO|LARGE delta antigen|Hepatitis delta virus genotype I

Query: 3 PWMVNIK 9
PW+ NIK
Sbjct: 49 PWLGNIK 55


>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31

Query: 4 WMVNIKE 10
W VN+KE
Sbjct: 448 WEVNLKE 454


>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13

Query: 4 WMVNIKE 10
W VN+KE
Sbjct: 442 WEVNLKE 448


>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16

Query: 4 WMVNIKE 10
W VN+KE
Sbjct: 447 WEVNLKE 453


>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11

Query: 4 WMVNIKE 10
W VN+KE
Sbjct: 443 WEVNLKE 449




45|Sequence|221|230|VNIKEDTDFF

>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2

Query: 2 NIKEDTDFF 10
N ++DTDF
Sbjct: 575 NSRDDTDFL 583


>sp|Y049_OSHVF|UNCHARACTERIZED protein ORF49|Ostreid herpesvirus 1 (isolate France)

Query: 1 VNIKEDTDFF 10
V I+ED DF
Sbjct: 315 VEIREDKDFL 324




46|Sequence|226|235|DTDFFQRTNQ

>sp|ICP27_MUHVS|MRNA export factor ICP27 homolog|Murid herpesvirus 1 (strain Smith)

Query: 1 DTDFFQRTNQ 10
DTDF+ T+Q
Sbjct: 801 DTDFYDETDQ 810


>sp|RIR2_GAHVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Gallid herpesvirus 2 (strain

Query: 1 DTDFFQRTN 9
+T+FF+R N
Sbjct: 324 NTNFFERRN 332




47|Sequence|231|240|QRTNQMYSYF

>sp|VF184_IIV3|PUTATIVE helicase 121R|Invertebrate iridescent virus 3 (IIV-3)

Query: 4 NQMYSYF 10
NQ+YS+F
Sbjct: 2 NQLYSFF 8




48|Sequence|236|245|MYSYFMFTRG

>sp|RDRP_BSNV|RNA-DIRECTED RNA polymerase|Blotched snakehead virus (BSNV) (Channa

Query: 3 SYFMFTRG 10
SY++ TRG
Sbjct: 422 SYYLLTRG 429


>sp|L_RYSV|RNA-DIRECTED RNA polymerase L|Rice yellow stunt virus (RYSV)

Query: 1 MYSYFMFTRG 10
MY+ FM+ +G
Sbjct: 781 MYNKFMYYKG 790


>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P

Query: 2 YSYFMFTR 9
Y+YF+F++
Sbjct: 66 YNYFLFSK 73


>sp|TGB2_PMTVS|MOVEMENT protein TGB2|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 1 MYSYFMFTR 9
+Y+Y FTR
Sbjct: 94 LYAYLWFTR 102


>sp|SPIKE_PEDV7|SPIKE glycoprotein|Porcine epidemic diarrhea virus (strain

Query: 4 YFMFTRG 10
YF FT+G
Sbjct: 616 YFQFTKG 622


>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human

Query: 1 MYSYFMFTRG 10
MY+ FTRG
Sbjct: 259 MYTRHFFTRG 268




49|Sequence|241|250|MFTRGGPYWQ

>sp|NS3B_IBVU5|NON-STRUCTURAL protein 3b|Avian infectious bronchitis virus (strain

Query: 4 RGGPYWQ 10
RGG YW+
Sbjct: 43 RGGNYWE 49


>sp|NS3B_IBVP3|NON-STRUCTURAL protein 3b|Avian infectious bronchitis virus (strain

Query: 4 RGGPYWQ 10
RGG YW+
Sbjct: 43 RGGNYWE 49


>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 5 GGPYWQ 10
GGP+W+
Sbjct: 275 GGPFWE 280


>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)

Query: 2 FTRGGPYW 9
F R GP W
Sbjct: 177 FLRNGPLW 184


>sp|BEL1_SFVCP|PROTEIN Bel-1|Simian foamy virus (isolate chimpanzee)

Query: 5 GGPYWQ 10
GGP+W+
Sbjct: 275 GGPFWK 280


>sp|VP6_ROTHG|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United

Query: 1 MFTRGGPY 8
+F +GGPY
Sbjct: 306 IFPQGGPY 313


>sp|VP6_ROTHF|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate

Query: 1 MFTRGGPY 8
+F +GGPY
Sbjct: 306 IFPQGGPY 313


>sp|VP6_ROTHC|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United

Query: 1 MFTRGGPY 8
+F +GGPY
Sbjct: 306 IFPQGGPY 313


>sp|NS3B_IBVM|NON-STRUCTURAL protein 3b|Avian infectious bronchitis virus (strain

Query: 2 FTRGGPYWQ 10
+ RGG +W+
Sbjct: 41 YYRGGNFWE 49


>sp|NS3B_IBVB|NON-STRUCTURAL protein 3b|Avian infectious bronchitis virus (strain

Query: 2 FTRGGPYWQ 10
+ RGG +W+
Sbjct: 41 YYRGGNFWE 49


>sp|NS3B_IBVU4|NON-STRUCTURAL protein 3b|Avian infectious bronchitis virus (strain

Query: 2 FTRGGPYWQ 10
+ RGG +W+
Sbjct: 41 YYRGGSFWE 49


>sp|VL1_BPV5|MAJOR capsid protein L1|Bovine papillomavirus type 5

Query: 1 MFTRGGPYWQ 10
+ T G PYW+
Sbjct: 42 LLTVGHPYWK 51


>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1

Query: 5 GGPYWQ 10
GGP+W+
Sbjct: 279 GGPFWE 284


>sp|PA_ISAV8|POLYMERASE acidic protein|Infectious salmon anemia virus (isolate

Query: 4 RGGPY 8
RGGPY
Sbjct: 243 RGGPY 247


>sp|NS1AB_OASV1|NON-STRUCTURAL polyprotein 1AB|Ovine astrovirus 1 (OAstV-1)

Query: 1 MFTRGGPYW 9
+ +G PYW
Sbjct: 1079 LVAKGNPYW 1087


>sp|POLG_HAVS2|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 2 FTRGGPYW 9
F RGG Y+
Sbjct: 1580 FNRGGTYY 1587


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 FTRGGPYW 9
F RGG Y+
Sbjct: 1578 FNRGGTYY 1585


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 FTRGGPYW 9
F RGG Y+
Sbjct: 1578 FNRGGTYY 1585


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 FTRGGPYW 9
F RGG Y+
Sbjct: 1578 FNRGGTYY 1585


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 FTRGGPYW 9
F RGG Y+
Sbjct: 1578 FNRGGTYY 1585


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 FTRGGPYW 9
F RGG Y+
Sbjct: 1576 FNRGGTYY 1583


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 FTRGGPYW 9
F RGG Y+
Sbjct: 1578 FNRGGTYY 1585


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 FTRGGPYW 9
F RGG Y+
Sbjct: 1578 FNRGGTYY 1585


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 FTRGGPYW 9
F RGG Y+
Sbjct: 1578 FNRGGTYY 1585


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 FTRGGPYW 9
F RGG Y+
Sbjct: 1412 FNRGGTYY 1419


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 FTRGGPYW 9
F RGG Y+
Sbjct: 1578 FNRGGTYY 1585


>sp|BEL1_SFV3L|PROTEIN Bel-1|Simian foamy virus type 3

Query: 5 GGPYWQ 10
GGP+W+
Sbjct: 276 GGPFWE 281


>sp|CAPSD_AQRVA|INNER capsid protein VP3|Aquareovirus A (isolate Chum

Query: 1 MFTRGGP 7
+F RGGP
Sbjct: 999 IFARGGP 1005


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 2 FTRGGP 7
FT+GGP
Sbjct: 2627 FTKGGP 2632


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2 FTRGGP 7
FT+GGP
Sbjct: 2590 FTKGGP 2595




50|Sequence|246|255|GPYWQEVKIP

>sp|YR350_MIMIV|PUTATIVE ATP-dependent RNA helicase R350|Acanthamoeba polyphaga mimivirus

Query: 2 PYWQEVKI 9
PYW EV+I
Sbjct: 600 PYWTEVRI 607


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1 GPYWQEVK 8
GPYW +VK
Sbjct: 1558 GPYWADVK 1565


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1 GPYWQEVK 8
GPYW +VK
Sbjct: 1558 GPYWADVK 1565


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1 GPYWQEVK 8
GPYW +VK
Sbjct: 1558 GPYWADVK 1565


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1 GPYWQEVK 8
GPYW +VK
Sbjct: 1558 GPYWADVK 1565


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 1 GPYWQEVK 8
G YWQE K
Sbjct: 2104 GEYWQEFK 2111


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 1 GPYWQEVK 8
G YWQE K
Sbjct: 2091 GEYWQEFK 2098


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 1 GPYWQEVK 8
G YWQE K
Sbjct: 2091 GEYWQEFK 2098


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1 GPYWQEVK 8
GPYW +V+
Sbjct: 1558 GPYWADVR 1565


>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)

Query: 1 GPYWQEVK 8
G YWQE K
Sbjct: 773 GEYWQEFK 780


>sp|RNL1_NPVAC|PUTATIVE bifunctional polynucleotide kinase/RNA ligase|Autographa

Query: 4 WQEVKIP 10
WQ++KIP
Sbjct: 676 WQDLKIP 682


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 1 GPYWQEVK 8
GPYW +V+
Sbjct: 1558 GPYWADVR 1565


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1 GPYWQEVK 8
GPYW +V+
Sbjct: 1560 GPYWADVR 1567


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 1 GPYWQEVK 8
GPYW +V+
Sbjct: 1558 GPYWADVR 1565


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1 GPYWQEVK 8
GPYW +V+
Sbjct: 1560 GPYWADVR 1567


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1 GPYWQEVK 8
GPYW +V+
Sbjct: 1558 GPYWADVR 1565


>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)

Query: 2 PYWQEVKIP 10
PYWQ +P
Sbjct: 370 PYWQYSPVP 378


>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 PYWQEVKIP 10
PYWQ +P
Sbjct: 370 PYWQYSPVP 378


>sp|VPA2_ARV|PROTEIN alpha-2|Adelaide River virus (ARV)

Query: 2 PYWQEVKI 9
P+W EV+I
Sbjct: 2 PFWVEVRI 9


>sp|GPF_BPMU|PUTATIVE capsid assembly protein F|Escherichia phage Mu (Bacteriophage Mu)

Query: 2 PYWQEVKI 9
PYWQ V +
Sbjct: 142 PYWQYVAV 149


>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1

Query: 1 GPYWQEV 7
GP+W+EV
Sbjct: 280 GPFWEEV 286


>sp|BEL1_SFVCP|PROTEIN Bel-1|Simian foamy virus (isolate chimpanzee)

Query: 1 GPYWQEV 7
GP+W+EV
Sbjct: 276 GPFWKEV 282


>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])

Query: 2 PYWQEVKIP 10
PY +VKIP
Sbjct: 709 PYEYDVKIP 717


>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])

Query: 2 PYWQEVKIP 10
PY +VKIP
Sbjct: 709 PYEYDVKIP 717


>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1 GPYWQEV 7
GP+W+EV
Sbjct: 276 GPFWEEV 282


>sp|VP3_ROTTU|PROTEIN VP3|Rotavirus A (isolate RVA/Monkey/United

Query: 2 PYWQEVKIP 10
PY +VKIP
Sbjct: 709 PYKYDVKIP 717


>sp|VP3_ROTSH|PROTEIN VP3|Rotavirus A (isolate RVA/Monkey/South

Query: 2 PYWQEVKIP 10
PY +VKIP
Sbjct: 709 PYKYDVKIP 717


>sp|VP3_ROTS1|PROTEIN VP3|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)

Query: 2 PYWQEVKIP 10
PY +VKIP
Sbjct: 709 PYKYDVKIP 717


>sp|KBTB1_VACCW|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Western

Query: 2 PYWQE 6
PYWQ+
Sbjct: 373 PYWQK 377


>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)

Query: 2 PYWQE 6
PYWQ+
Sbjct: 373 PYWQK 377


>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)

Query: 2 PYWQE 6
PYWQ+
Sbjct: 373 PYWQK 377


>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /

Query: 2 PYWQE 6
PYWQ+
Sbjct: 373 PYWQK 377


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 2 PYWQEVK 8
PYW +VK
Sbjct: 1569 PYWGDVK 1575


>sp|POL_JEMBR|GAG-POL polyprotein|Jembrana disease virus (JDV)

Query: 2 PYWQEVKIP 10
P+W E +IP
Sbjct: 412 PFWAEERIP 420


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 2 PYWQEVK 8
PYW +VK
Sbjct: 1569 PYWGDVK 1575


>sp|Y104_OSHVF|UNCHARACTERIZED protein ORF104|Ostreid herpesvirus 1 (isolate France)

Query: 2 PYWQEVKIP 10
P +EVKIP
Sbjct: 707 PVGEEVKIP 715


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 2 PYWQEVK 8
PYW +VK
Sbjct: 1565 PYWGDVK 1571


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2 PYWQEVK 8
PYW +VK
Sbjct: 1570 PYWGDVK 1576


>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])

Query: 2 PYWQEVKIP 10
PY +VK+P
Sbjct: 709 PYTYDVKVP 717


>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)

Query: 2 PYWQEVKIP 10
PY +VK+P
Sbjct: 709 PYEYDVKVP 717


>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 2 PYWQEVKIP 10
PY +VK+P
Sbjct: 709 PYEYDVKVP 717


>sp|VP3_ROTW3|PROTEIN VP3|Rotavirus A (strain RVA/Cow/United States/WC3/1981/G6P7[5])

Query: 2 PYWQEVKIP 10
PY +VK+P
Sbjct: 709 PYEYDVKVP 717


>sp|VP3_ROTRF|PROTEIN VP3|Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1]) (RV-A)

Query: 2 PYWQEVKIP 10
PY +VK+P
Sbjct: 709 PYEYDVKVP 717


>sp|VP3_ROTP5|PROTEIN VP3|Rotavirus A (strain RVA/Pig/United States/OSU/1977/G5P9[7])

Query: 2 PYWQEVKIP 10
PY +VK+P
Sbjct: 709 PYEYDVKVP 717


>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)

Query: 2 PYWQEVKIP 10
PY +VK+P
Sbjct: 709 PYEYDVKVP 717


>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])

Query: 2 PYWQEVKIP 10
PY +VK+P
Sbjct: 709 PYEYDVKVP 717


>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])

Query: 2 PYWQEVKIP 10
PY +VK+P
Sbjct: 709 PYEYDVKVP 717


>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)

Query: 2 PYWQEVKIP 10
PY +VK+P
Sbjct: 709 PYEYDVKVP 717


>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 2 PYWQEVKIP 10
PY +VK+P
Sbjct: 709 PYEYDVKVP 717


>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])

Query: 2 PYWQEVKIP 10
PY +VK+P
Sbjct: 709 PYEYDVKVP 717


>sp|VP3_ROTBU|PROTEIN VP3|Rotavirus A (strain RVA/Cow/United Kingdom/UK/1975/G6P7[5])

Query: 2 PYWQEVKIP 10
PY +VK+P
Sbjct: 709 PYEYDVKVP 717


>sp|VP3_ROTBN|PROTEIN VP3|Rotavirus A (strain RVA/Cow/United

Query: 2 PYWQEVKIP 10
PY +VK+P
Sbjct: 709 PYEYDVKVP 717


>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)

Query: 2 PYWQEVKIP 10
PY +VK+P
Sbjct: 709 PYKYDVKVP 717


>sp|VP3_ROTEL|PROTEIN VP3|Rotavirus A (isolate RVA/Equine/United

Query: 2 PYWQEVKIP 10
PY +VK+P
Sbjct: 709 PYKYDVKVP 717


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 2 PYWQEVK 8
PYWQ+++
Sbjct: 1757 PYWQKLE 1763


>sp|BEL1_SFV3L|PROTEIN Bel-1|Simian foamy virus type 3

Query: 1 GPYWQEV 7
GP+W++V
Sbjct: 277 GPFWEQV 283


>sp|NEEDL_BPT4|PRE-BASEPLATE central spike protein Gp5|Enterobacteria phage T4 (Bacteriophage

Query: 1 GPYWQEV 7
GP WQ V
Sbjct: 263 GPVWQAV 269




51|Sequence|251|260|EVKIPFSKFF

>sp|VP1_APRVF|PUTATIVE structural protein VP1|Aedes pseudoscutellaris reovirus (isolate

Query: 1 EVKIPFSKFF 10
EVK+ F+++F
Sbjct: 1075 EVKLLFNRYF 1084


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 4 IPFSKFF 10
IPF++FF
Sbjct: 914 IPFNRFF 920


>sp|NMT_MIMIV|PUTATIVE glycylpeptide N-tetradecanoyltransferase|Acanthamoeba polyphaga

Query: 1 EVKIPFSKFF 10
++KIP+ FF
Sbjct: 112 KIKIPYINFF 121




52|Sequence|256|265|FSKFFFSNRG

>sp|VF354_ASFP4|UNCHARACTERIZED protein B354L|African swine fever virus (isolate

Query: 1 FSKFFFSNR 9
F KFF+ NR
Sbjct: 220 FKKFFYQNR 228


>sp|VF354_ASFM2|UNCHARACTERIZED protein B354L|African swine fever virus (isolate

Query: 1 FSKFFFSNR 9
F KFF+ NR
Sbjct: 220 FKKFFYQNR 228


>sp|VF354_ASFB7|UNCHARACTERIZED protein B354L|African swine fever virus (strain

Query: 1 FSKFFFSNR 9
F KFF+ NR
Sbjct: 220 FKKFFYQNR 228


>sp|VF354_ASFWA|UNCHARACTERIZED protein B354L|African swine fever virus (isolate

Query: 1 FSKFFFSNR 9
F KFF+ NR
Sbjct: 220 FKKFFYQNR 228


>sp|VF354_ASFK5|UNCHARACTERIZED protein B354L|African swine fever virus (isolate

Query: 1 FSKFFFSNR 9
F KFF+ NR
Sbjct: 220 FKKFFYQNR 228


>sp|POL2_ARMVS|RNA2 polyprotein|Arabis mosaic virus (isolate Syrah)

Query: 3 KFFFSNR 9
KF++SNR
Sbjct: 3 KFYYSNR 9


>sp|POL2_GFLVN|RNA2 polyprotein|Grapevine fanleaf virus (isolate NW)

Query: 3 KFFFSNR 9
KF++SNR
Sbjct: 3 KFYYSNR 9


>sp|POL2_GFLV|RNA2 polyprotein|Grapevine fanleaf virus (GFLV)

Query: 3 KFFFSNR 9
KF++SNR
Sbjct: 3 KFYYSNR 9


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 FSKFFFSNRG 10
FSK+F N G
Sbjct: 2869 FSKWFNENHG 2878


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 FSKFFFSNRG 10
FSK+F N G
Sbjct: 2862 FSKWFNENHG 2871


>sp|YR658_MIMIV|UNCHARACTERIZED protein R658|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 SKFFFSNR 9
SKF+F N+
Sbjct: 513 SKFYFENK 520


>sp|CAPS3_MIMIV|PROBABLE capsid protein 3|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 SKFFFSNRG 10
+KFFF N G
Sbjct: 1000 NKFFFKNTG 1008


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 FSKFFFSNRG 10
FSK+F N G
Sbjct: 2869 FSKWFNENHG 2878


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 FSKFFFSNRG 10
FSK+F N G
Sbjct: 2862 FSKWFNENHG 2871


>sp|YL678_MIMIV|PUTATIVE SET domain-containing protein L678|Acanthamoeba polyphaga mimivirus

Query: 2 SKFFFSNR 9
SKF+FSN+
Sbjct: 219 SKFYFSNQ 226




53|Sequence|261|270|FSNRGRIRDV

>sp|RDRP_SMYEA|RNA replication protein|Strawberry mild yellow edge-associated virus

Query: 1 FSNRGRIRDV 10
+ +RGRI+D+
Sbjct: 104 YLSRGRIKDI 113


>sp|KR73_ICHVA|PROTEIN kinase ORF73|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 FSNRGRI 7
F+NRGR+
Sbjct: 443 FTNRGRL 449


>sp|YO24_BPHC1|PUTATIVE tail tube protein|Haemophilus phage HP1 (strain HP1c1)

Query: 1 FSNRGRIRD 9
F+ RG IRD
Sbjct: 85 FAQRGGIRD 93




54|Sequence|266|275|RIRDVQHELP

>sp|UL43_PSHV1|MEMBRANE protein UL43|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 RIRDVQHELP 10
R+R V+H LP
Sbjct: 4 RLRSVRHALP 13


>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)

Query: 1 RIRDVQHELP 10
+ RD++H LP
Sbjct: 1630 KFRDIRHFLP 1639


>sp|MCP_PSHV1|MAJOR capsid protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 RIRDVQHELP 10
R+R V H LP
Sbjct: 919 RLRQVAHTLP 928


>sp|POLG_TMEVG|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 1 RIRDVQHE 8
++RDV+HE
Sbjct: 1690 KLRDVRHE 1697


>sp|Y021_OSHVF|UNCHARACTERIZED protein ORF21|Ostreid herpesvirus 1 (isolate France)

Query: 1 RIRDVQHEL 9
RIR V HEL
Sbjct: 903 RIRSVLHEL 911


>sp|ENV_WDSV|ENVELOPE glycoprotein|Walleye dermal sarcoma virus (WDSV)

Query: 2 IRDVQHE 8
+RD+QHE
Sbjct: 576 LRDIQHE 582


>sp|Y05G_BPT4|UNCHARACTERIZED 38.9 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 RIRDVQHELP 10
++ D++H LP
Sbjct: 170 KVEDIKHRLP 179


>sp|FUS_MPV15|FUSION glycoprotein F0|Murine pneumonia virus (strain 15)

Query: 2 IRDVQHEL 9
IRDV+H +
Sbjct: 455 IRDVEHSI 462


>sp|TGB2_LSV|MOVEMENT protein TGB2|Lily symptomless virus (LSV)

Query: 2 IRDVQHELP 10
+ D+QH LP
Sbjct: 37 VGDLQHNLP 45




55|Sequence|271|280|QHELPLDKIS

>sp|ESTE_SFAVA|PUTATIVE esterase|Spodoptera frugiperda ascovirus 1a (SfAV-1a)

Query: 2 HELPLDK 8
H LPLDK
Sbjct: 281 HHLPLDK 287


>sp|ESTE_HVAVE|PUTATIVE esterase|Heliothis virescens ascovirus 3e (HvAV-3e)

Query: 2 HELPLDK 8
H LPLDK
Sbjct: 285 HHLPLDK 291


>sp|VG54_ICHVA|UNCHARACTERIZED protein ORF54|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 QHELPLD 7
+H LPLD
Sbjct: 446 EHRLPLD 452


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 HELPLDK 8
HE+P+D+
Sbjct: 2165 HEIPMDR 2171


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 HELPLDK 8
HE+P+D+
Sbjct: 2145 HEIPMDR 2151


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 2 HELPLDKIS 10
H++P+DK +
Sbjct: 2079 HQVPMDKFT 2087


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 HELPLDK 8
HE+P+D+
Sbjct: 2142 HEIPMDR 2148


>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 3 ELPLDKIS 10
ELPL+K S
Sbjct: 1621 ELPLEKFS 1628




56|Sequence|276|285|LDKISSIGFT

>sp|YL862_MIMIV|UNCHARACTERIZED protein L862|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LDKISSIGF 9
LDKI IGF
Sbjct: 135 LDKIYQIGF 143




57|Sequence|281|290|SIGFTLADKV

>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7

Query: 1 SIGFTLADKV 10
S+G+ L DK+
Sbjct: 603 SVGYPLTDKI 612


>sp|YR034_MIMIV|UNCHARACTERIZED protein R34|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 IGFTLADK 9
+GFTL DK
Sbjct: 264 LGFTLNDK 271


>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51

Query: 3 GFTLADKV 10
G TLADK+
Sbjct: 37 GTTLADKI 44


>sp|VL2_HPV42|MINOR capsid protein L2|Human papillomavirus 42

Query: 3 GFTLADKV 10
G TLADK+
Sbjct: 37 GTTLADKI 44


>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69

Query: 3 GFTLADKV 10
G TLADK+
Sbjct: 37 GSTLADKI 44


>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26

Query: 3 GFTLADKV 10
G TLADK+
Sbjct: 37 GSTLADKI 44


>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82

Query: 3 GFTLADKV 10
G TLADK+
Sbjct: 37 GTTLADKI 44




58|Sequence|286|295|LADKVDGPFF

>sp|VP5_BTV13|OUTER capsid protein VP5|Bluetongue virus 13 (isolate USA)

Query: 1 LADKVDGPFF 10
L DKVD P F
Sbjct: 513 LGDKVDVPLF 522


>sp|VP5_BTV17|OUTER capsid protein VP5|Bluetongue virus 17 (isolate USA)

Query: 1 LADKVDGPFF 10
L DK+D P F
Sbjct: 513 LGDKIDVPLF 522


>sp|VP5_BTV11|OUTER capsid protein VP5|Bluetongue virus 11 (isolate USA)

Query: 1 LADKVDGPFF 10
L DK+D P F
Sbjct: 513 LGDKIDVPLF 522


>sp|VP5_BTV10|OUTER capsid protein VP5|Bluetongue virus 10 (isolate USA)

Query: 1 LADKVDGPFF 10
L DK+D P F
Sbjct: 513 LGDKIDVPLF 522


>sp|Y247_ABVP|UNCHARACTERIZED protein ORF247|Acidianus bottle-shaped virus (isolate

Query: 1 LADKVDGPFF 10
LAD+V PF+
Sbjct: 128 LADRVRTPFY 137


>sp|Y025_NPVAC|UNCHARACTERIZED 36.6 kDa protein in|Autographa californica nuclear polyhedrosis

Query: 3 DKVDGP 8
DK+DGP
Sbjct: 261 DKIDGP 266


>sp|PTPH2_MDBVW|TYROSINE phosphatase H2|Microplitis demolitor bracovirus (isolate Webb)

Query: 1 LADKVDGPF 9
+A KVDG F
Sbjct: 35 MAQKVDGTF 43




59|Sequence|291|300|DGPFFLEIDF

>sp|POLG_CILVC|RNA replication protein|Citrus leprosis virus C (isolate

Query: 1 DGPFFLEI 8
D P+FLE+
Sbjct: 719 DSPYFLEV 726


>sp|389L_IIV6|PROBABLE serine/threonine-protein kinase 389L|Invertebrate iridescent virus

Query: 1 DGPFFLEIDF 10
+GP F+E+ F
Sbjct: 168 NGPLFVEMHF 177


>sp|Y05F_BPT4|UNCHARACTERIZED 36.7 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 DGPFFLEID 9
DG F+EID
Sbjct: 38 DGKVFVEID 46


>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 GPFFLEI 8
GPFFL I
Sbjct: 70 GPFFLGI 76


>sp|SCAF_EHV1V|CAPSID scaffolding protein|Equine herpesvirus 1 (strain V592)

Query: 2 GPFFLEI 8
GPFFL I
Sbjct: 73 GPFFLGI 79


>sp|SCAF_EHV1B|CAPSID scaffolding protein|Equine herpesvirus 1 (strain Ab4p)

Query: 2 GPFFLEI 8
GPFFL I
Sbjct: 73 GPFFLGI 79


>sp|HEPA_EHV1V|DNA helicase/primase complex-associated protein|Equine herpesvirus 1

Query: 2 GPFFLEIDF 10
GP+F + DF
Sbjct: 377 GPWFAKFDF 385


>sp|HEPA_EHV1B|DNA helicase/primase complex-associated protein|Equine herpesvirus 1

Query: 2 GPFFLEIDF 10
GP+F + DF
Sbjct: 377 GPWFAKFDF 385


>sp|RDRP_HASV|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Helicoverpa armigera stunt virus (HaSV)

Query: 1 DGPFFLEIDF 10
D P+ +IDF
Sbjct: 1041 DDPYIRDIDF 1050


>sp|CAPSD_FDVS|INNER capsid protein S2|Fiji disease virus (isolate Sugarcane)

Query: 3 PFFLEIDF 10
P++ EIDF
Sbjct: 133 PYYHEIDF 140


>sp|YL207_MIMIV|PUTATIVE helicase L207/L206|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GPFFLEIDF 10
GP +++DF
Sbjct: 124 GPIIIDLDF 132




60|Sequence|296|305|LEIDFIGVFT

>sp|MATRX_BDV1|MATRIX protein|Borna disease virus 1 (BoDV-1)

Query: 1 LEIDFIG 7
LEIDF+G
Sbjct: 24 LEIDFVG 30


>sp|MATRX_BDVV|MATRIX protein|Borna disease virus (strain V)

Query: 1 LEIDFIG 7
LEIDF+G
Sbjct: 24 LEIDFVG 30




61|Sequence|301|310|IGVFTDPAHT

>sp|AN_SHV21|SHUTOFF alkaline exonuclease|Saimiriine herpesvirus 2 (strain 11)

Query: 2 GVFTDPAHT 10
G+F +P HT
Sbjct: 361 GIFMNPRHT 369


>sp|TRM1_SHV21|TRIPARTITE terminase subunit 1|Saimiriine herpesvirus 2 (strain 11)

Query: 1 IGVFTDPAH 9
I F DPAH
Sbjct: 21 ILTFVDPAH 29


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 2 GVFTDPAH 9
GVF D AH
Sbjct: 443 GVFQDTAH 450


>sp|Y189_ATV|PUTATIVE zinc finger protein ORF189|Acidianus two-tailed virus (ATV)

Query: 4 FTDPAH 9
FTDP H
Sbjct: 162 FTDPQH 167


>sp|DPOL_ADES1|DNA polymerase|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 IGVFTDP 7
+GVFT+P
Sbjct: 556 LGVFTEP 562


>sp|LTP_EHV2|LARGE tegument protein deneddylase|Equine herpesvirus 2 (strain 86/87)

Query: 2 GVFTDPAH 9
GV T PAH
Sbjct: 1475 GVVTGPAH 1482


>sp|FII_BPN15|HEAD-TAIL joining protein|Escherichia phage N15 (Bacteriophage N15)

Query: 1 IGVFTDPAH 9
+GVF DP +
Sbjct: 40 VGVFDDPEN 48


>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 VFTDPAHT 10
V+ DPA+T
Sbjct: 478 VYVDPAYT 485


>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 VFTDPAHT 10
V+ DPA+T
Sbjct: 478 VYVDPAYT 485


>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 VFTDPAHT 10
V+ DPA+T
Sbjct: 478 VYVDPAYT 485


>sp|HN_NDVQ|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Queensland/66)

Query: 2 GVFTDP 7
GV+TDP
Sbjct: 468 GVYTDP 473


>sp|HN_NDVD|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain D26/76)

Query: 2 GVFTDP 7
GV+TDP
Sbjct: 468 GVYTDP 473


>sp|HN_NDVU|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Chicken/Northern

Query: 2 GVFTDP 7
GV+TDP
Sbjct: 468 GVYTDP 473




62|Sequence|306|315|DPAHTEEFAY

>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United States/Urbana/1960)

Query: 2 PAHTEEF 8
PAHTE+F
Sbjct: 1273 PAHTEDF 1279


>sp|Y020_HIS1I|UNCHARACTERIZED protein ORF20|His1 virus (isolate Australia/Victoria) (His1V)

Query: 1 DPAHTEEFAY 10
DP++TEE A+
Sbjct: 44 DPSNTEEKAW 53


>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)

Query: 2 PAHTEEF 8
PAHTE++
Sbjct: 1273 PAHTEDY 1279


>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)

Query: 2 PAHTEEF 8
PAHTE++
Sbjct: 1273 PAHTEDY 1279


>sp|POLG_FCVC6|GENOME polyprotein|Feline calicivirus (strain CFI/68 FIV)

Query: 2 PAHTEEF 8
PAH E+F
Sbjct: 1272 PAHLEDF 1278


>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)

Query: 1 DPAHTEEF 8
DP+H++E+
Sbjct: 622 DPSHSQEW 629


>sp|POLG_SMSV4|GENOME polyprotein|San Miguel sea lion virus

Query: 2 PAHTEEF 8
PAHT+++
Sbjct: 721 PAHTDDY 727




63|Sequence|311|320|EEFAYENSPE

>sp|POL1_BAYMJ|GENOME polyprotein 1|Barley yellow mosaic virus (strain

Query: 1 EEFAYENSPE 10
EEF ++ SPE
Sbjct: 1978 EEFGHDFSPE 1987


>sp|POL1_BAYMY|GENOME polyprotein 1|Barley yellow mosaic virus (isolate

Query: 1 EEFAYENSPE 10
EEF ++ SPE
Sbjct: 1978 EEFGHDFSPE 1987


>sp|POL1_BAYMG|GENOME polyprotein 1|Barley yellow mosaic virus (isolate

Query: 1 EEFAYENSPE 10
EEF ++ SPE
Sbjct: 1980 EEFGHDFSPE 1989


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 2 EFAYENSPE 10
EFAY N P+
Sbjct: 1252 EFAYFNGPD 1260


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 2 EFAYENSPE 10
EFAY N P+
Sbjct: 1250 EFAYFNGPD 1258


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 2 EFAYENSPE 10
EFAY N P+
Sbjct: 1271 EFAYFNGPD 1279


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 1 EEFAYENSPE 10
EEF NSP+
Sbjct: 804 EEFIQTNSPK 813




64|Sequence|316|327|ENSPELNPRLFK

>sp|CAPSD_SMSV1|CAPSID protein VP1|San Miguel sea lion virus

Query: 3 SPELNPRL 10
SPELNP L
Sbjct: 225 SPELNPYL 232


>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 4 PELNPRL 10
P+LNPR+
Sbjct: 237 PDLNPRI 243


>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 4 PELNPRL 10
P+LNPR+
Sbjct: 237 PDLNPRI 243


>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 4 PELNPRL 10
P+LNPR+
Sbjct: 237 PDLNPRI 243


>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 4 PELNPRL 10
P+LNPR+
Sbjct: 237 PDLNPRI 243


>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 4 PELNPRL 10
P+LNPR+
Sbjct: 237 PDLNPRI 243


>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 4 PELNPRL 10
P+LNPR+
Sbjct: 237 PDLNPRI 243


>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 4 PELNPRL 10
P+LNPR+
Sbjct: 237 PDLNPRI 243


>sp|VF295_IIV3|UNCHARACTERIZED protein 016R|Invertebrate iridescent virus 3 (IIV-3)

Query: 6 LNPRLFK 12
+NPRLFK
Sbjct: 655 VNPRLFK 661


>sp|HN_PI3B|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (BPIV-3)

Query: 4 PELNPRL 10
P+LNPR+
Sbjct: 237 PDLNPRV 243


>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 4 PELNPR 9
PELNP+
Sbjct: 306 PELNPK 311


>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 4 PELNPR 9
PELNP+
Sbjct: 306 PELNPK 311


>sp|RDRP_TRVPP|REPLICASE large subunit|Tobacco rattle virus (isolate PpK20)

Query: 1 ENSPELNP 8
EN ELNP
Sbjct: 1682 ENDKELNP 1689


>sp|194K_TRVSY|REPLICASE large subunit|Tobacco rattle virus (strain SYM)

Query: 1 ENSPELNP 8
EN ELNP
Sbjct: 1682 ENDKELNP 1689


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1 ENSPELNPR 9
EN PE+N R
Sbjct: 1712 ENIPEINAR 1720


>sp|YL038_MIMIV|PUTATIVE ankyrin repeat protein L38|Acanthamoeba polyphaga mimivirus

Query: 2 NSPELNPRLF 11
N PE N +LF
Sbjct: 64 NKPEFNNKLF 73


>sp|463L_IIV6|PROBABLE lipid hydrolase 463L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 NSPELNPRL 10
++P+LNP L
Sbjct: 251 DTPDLNPSL 259


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 2 NSPELNPRLFK 12
N P NP +FK
Sbjct: 6366 NQPLPNPAIFK 6376


>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 ENSPELNPRL 10
EN+PEL RL
Sbjct: 432 ENTPELLGRL 441


>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 ENSPELNPRL 10
EN+PEL RL
Sbjct: 432 ENTPELLGRL 441


>sp|YR640_MIMIV|UNCHARACTERIZED protein R640|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 SPELNPRL 10
+P++NPR+
Sbjct: 167 NPQMNPRI 174






THE END