CIA30_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|GRLLKHVLAM

>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GRLLKHVLAM 10
G +LK V+AM
Sbjct: 340 GLILKEVMAM 349


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GRLLKHV 7
GRL KHV
Sbjct: 201 GRLAKHV 207


>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus (strain

Query: 1 GRLLKHVLAM 10
GRL HVL +
Sbjct: 331 GRLRNHVLKL 340




2|SequenceR|15|6|RLFYTGRLLK

>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 RLFYTGRLLK 10
R F GRL+K
Sbjct: 225 RFFPNGRLMK 234


>sp|IDI2_METB6|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanoregula boonei (strain DSM 21154

Query: 1 RLFYTGR 7
RLF TGR
Sbjct: 342 RLFITGR 348


>sp|Y452_METAC|UNCHARACTERIZED glycosyltransferase MA_0452|Methanosarcina acetivorans (strain ATCC

Query: 1 RLFYTGRLLK 10
+LFY+G L++
Sbjct: 185 KLFYSGPLVR 194


>sp|SYH_METS5|HISTIDINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 RLFYTGRLLK 10
R+FY GR+ +
Sbjct: 100 RIFYIGRVYR 109


>sp|SPEE_PYRCJ|POLYAMINE aminopropyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 FYTGRL 8
FYTGR+
Sbjct: 270 FYTGRV 275


>sp|SURE_METMJ|5'-NUCLEOTIDASE SurE|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RLFYTG 6
+LFYTG
Sbjct: 194 KLFYTG 199


>sp|NUCS_PYRAE|ENDONUCLEASE NucS|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LFYTGR 7
+FYTGR
Sbjct: 38 VFYTGR 43


>sp|SYH_SULAC|HISTIDINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RLFYTGRLLK 10
RLFY G++ +
Sbjct: 100 RLFYVGQVYR 109


>sp|NTPTH_METS5|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Metallosphaera sedula (strain ATCC 51363

Query: 1 RLFYTGR 7
RLF TGR
Sbjct: 13 RLFITGR 19


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain ATCC

Query: 2 LFYTGRLLK 10
++YTG L K
Sbjct: 351 VYYTGNLAK 359




3|SequenceR|20|11|PKSFKRLFYT

>sp|LEUD2_ARCFU|3-ISOPROPYLMALATE dehydratase small subunit 2|Archaeoglobus fulgidus (strain ATCC

Query: 2 KSFKRLFY 9
KSF R+FY
Sbjct: 86 KSFARIFY 93


>sp|LEUD1_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 2 KSFKRLFY 9
KSF R+FY
Sbjct: 85 KSFARIFY 92


>sp|HACB_METJA|METHANOGEN homoaconitase small subunit|Methanocaldococcus jannaschii (strain

Query: 2 KSFKRLFY 9
KSF R+FY
Sbjct: 85 KSFARIFY 92


>sp|LEUD1_PYRFU|3-ISOPROPYLMALATE dehydratase small subunit 1|Pyrococcus furiosus (strain ATCC

Query: 2 KSFKRLFY 9
KSF R+FY
Sbjct: 85 KSFARIFY 92


>sp|RNZ_PYRIL|RIBONUCLEASE Z|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KSFKRLFYT 10
K F+RL YT
Sbjct: 181 KRFRRLLYT 189


>sp|RNZ_PYRCJ|RIBONUCLEASE Z|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 KSFKRLFYT 10
+ FKRL YT
Sbjct: 181 RRFKRLLYT 189


>sp|LEUD2_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 2 KSFKRLFY 9
KSF R+FY
Sbjct: 85 KSFGRIFY 92


>sp|LEUD2_METKA|3-ISOPROPYLMALATE dehydratase small subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 2 KSFKRLFY 9
+SF R+FY
Sbjct: 85 RSFARIFY 92


>sp|LEUD1_METKA|3-ISOPROPYLMALATE dehydratase small subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 2 KSFKRLFY 9
+SF R+FY
Sbjct: 87 RSFARIFY 94


>sp|LEUD_METMA|3-ISOPROPYLMALATE dehydratase small subunit|Methanosarcina mazei (strain ATCC

Query: 2 KSFKRLFY 9
KSF R+F+
Sbjct: 83 KSFARIFF 90


>sp|LEUD_METAC|3-ISOPROPYLMALATE dehydratase small subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 KSFKRLFY 9
KSF R+F+
Sbjct: 83 KSFARIFF 90


>sp|HACB_METMA|METHANOGEN homoaconitase small subunit|Methanosarcina mazei (strain ATCC

Query: 2 KSFKRLFY 9
KSF R+F+
Sbjct: 88 KSFARIFF 95


>sp|HACB2_METAC|METHANOGEN homoaconitase small subunit 2|Methanosarcina acetivorans (strain

Query: 2 KSFKRLFY 9
KSF R+F+
Sbjct: 87 KSFARIFF 94


>sp|HACB1_METAC|METHANOGEN homoaconitase small subunit 1|Methanosarcina acetivorans (strain

Query: 2 KSFKRLFY 9
KSF R+F+
Sbjct: 88 KSFARIFF 95


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KSFKRLFYT 10
K ++RL YT
Sbjct: 181 KRYRRLLYT 189


>sp|LEUD_SULTO|3-ISOPROPYLMALATE dehydratase small subunit|Sulfurisphaera tokodaii (strain DSM

Query: 2 KSFKRLFY 9
+SF R+FY
Sbjct: 85 ESFARIFY 92


>sp|LEUD_SACS2|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 KSFKRLFY 9
+SF R+FY
Sbjct: 85 ESFARIFY 92


>sp|LEUD_SACI7|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 2 KSFKRLFY 9
+SF R+FY
Sbjct: 85 ESFARIFY 92


>sp|LEUD_SACI6|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain M.16.4

Query: 2 KSFKRLFY 9
+SF R+FY
Sbjct: 85 ESFARIFY 92


>sp|LEUD_SACI4|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 2 KSFKRLFY 9
+SF R+FY
Sbjct: 85 ESFARIFY 92


>sp|LEUD_SACI3|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 2 KSFKRLFY 9
+SF R+FY
Sbjct: 85 ESFARIFY 92


>sp|LEUD_SACI2|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 2 KSFKRLFY 9
+SF R+FY
Sbjct: 85 ESFARIFY 92


>sp|LEUD_SACI1|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 2 KSFKRLFY 9
+SF R+FY
Sbjct: 85 ESFARIFY 92


>sp|LEUD_PYRCJ|3-ISOPROPYLMALATE dehydratase small subunit|Pyrobaculum calidifontis (strain DSM

Query: 2 KSFKRLFY 9
+SF R+FY
Sbjct: 84 ESFARIFY 91


>sp|LEUD_METS5|3-ISOPROPYLMALATE dehydratase small subunit|Metallosphaera sedula (strain ATCC

Query: 2 KSFKRLFY 9
+SF R+FY
Sbjct: 85 ESFARIFY 92


>sp|LEUD_METJA|ISOPROPYLMALATE/CITRAMALATE isomerase small subunit|Methanocaldococcus jannaschii (strain

Query: 2 KSFKRLFY 9
+SF R+FY
Sbjct: 87 ESFARIFY 94


>sp|HACB_METTH|METHANOGEN homoaconitase small subunit|Methanothermobacter

Query: 2 KSFKRLFY 9
+SF R+FY
Sbjct: 87 ESFARIFY 94


>sp|GUAAB_SULTO|GMP synthase [glutamine-hydrolyzing] subunit B|Sulfurisphaera tokodaii

Query: 2 KSFKRLFY 9
K F++LFY
Sbjct: 101 KKFRQLFY 108


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KSFKRLFY 9
++FKR FY
Sbjct: 235 ETFKRFFY 242


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 2 KSFKRLFYT 10
K F+ LFY+
Sbjct: 102 KKFRELFYS 110


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 2 KSFKRLFYT 10
K F+ LFY+
Sbjct: 102 KKFRELFYS 110


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 2 KSFKRLFYT 10
K F+ LFY+
Sbjct: 102 KKFRELFYS 110


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 2 KSFKRLFYT 10
K F+ LFY+
Sbjct: 102 KKFRELFYS 110


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 2 KSFKRLFYT 10
K F+ LFY+
Sbjct: 102 KKFRELFYS 110


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 2 KSFKRLFYT 10
K F+ LFY+
Sbjct: 102 KKFRELFYS 110


>sp|LEUD_METTH|3-ISOPROPYLMALATE dehydratase small subunit|Methanothermobacter thermautotrophicus

Query: 2 KSFKRLFY 9
+SF R+FY
Sbjct: 83 ESFARIFY 90


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 1 PKSFKRLFYT 10
PK K FYT
Sbjct: 21 PKERKTTFYT 30


>sp|Y1649_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 2 KSFKRLFYT 10
K+F RL YT
Sbjct: 19 KNFSRLVYT 27




4|SequenceR|25|16|YLASTPKSFK

>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 1 YLASTPKSFK 10
Y++ PK+FK
Sbjct: 366 YVSCNPKTFK 375


>sp|PURP_THEKO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Thermococcus kodakarensis (strain ATCC

Query: 1 YLASTPKSF 9
+LAS+P+ F
Sbjct: 141 FLASSPEDF 149


>sp|TRPF_THEKO|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YLASTPKSF 9
YL ST K+F
Sbjct: 55 YLVSTMKTF 63




5|SequenceR|30|21|IGLFPYLAST

>sp|RFCL_HALLT|REPLICATION factor C large subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 IGLFPYL 7
+GLFPYL
Sbjct: 236 LGLFPYL 242


>sp|COBS_METMA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IGLFPYLAS 9
IGL PYLA+
Sbjct: 214 IGLIPYLAA 222


>sp|COBS_METAC|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IGLFPYLAS 9
IGL PYLA+
Sbjct: 214 IGLIPYLAA 222


>sp|PURA_NATPD|ADENYLOSUCCINATE synthetase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GLFPYLAST 10
G++PY+ S+
Sbjct: 241 GIYPYVTSS 249


>sp|COBS_METBF|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IGLFPYLAS 9
IGL PYL +
Sbjct: 214 IGLLPYLGA 222


>sp|IF6_NANEQ|TRANSLATION initiation factor 6|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 IGLFPYLAS 9
IGLF Y+A+
Sbjct: 14 IGLFGYIAN 22


>sp|CAPPA_PICTO|PHOSPHOENOLPYRUVATE carboxylase|Picrophilus torridus (strain ATCC 700027

Query: 1 IGLFPYLAST 10
IGLF Y ST
Sbjct: 360 IGLFGYSRST 369


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IGLFPYLAST 10
IGLF Y ST
Sbjct: 362 IGLFGYSRST 371


>sp|CAPPA_SULAC|PHOSPHOENOLPYRUVATE carboxylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IGLFPYLAST 10
IGLF Y ST
Sbjct: 362 IGLFGYSRST 371




6|SequenceR|35|26|YEAFRIGLFP

>sp|HIS6_THEON|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus onnurineus (strain

Query: 1 YEAFRIG 7
YEAF+IG
Sbjct: 211 YEAFKIG 217


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 1 YEAFRIG 7
YE FR+G
Sbjct: 28 YEVFRVG 34


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 1 YEAFRIGL 8
++AFR+G+
Sbjct: 425 FDAFRLGM 432


>sp|Y1774_METTH|PROBABLE metallophosphoesterase MTH_1774|Methanothermobacter

Query: 2 EAFRIGLF 9
E+FR+GL
Sbjct: 77 ESFRVGLI 84




7|SequenceR|40|31|QLSSSYEAFR

>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LSSSYEAFR 10
L+ SYEA+R
Sbjct: 253 LAGSYEAYR 261


>sp|AROE_METTP|SHIKIMATE dehydrogenase (NADP(+))|Methanothrix thermoacetophila (strain DSM

Query: 2 LSSSYEAFR 10
L +SY AFR
Sbjct: 29 LQASYHAFR 37


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 QLSSSYEAFR 10
+LSSS+E R
Sbjct: 101 ELSSSFEVLR 110




8|SequenceR|45|36|SAVPKQLSSS

***** No hits found ******


9|SequenceR|50|41|SAKGPSAVPK

>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 3 KGPSAVPK 10
KGP VPK
Sbjct: 173 KGPEDVPK 180




10|SequenceR|55|46|TKRQSSAKGP

***** No hits found ******


11|SequenceR|60|51|QLDGETKRQS

>sp|PUR5_METM5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C5 /

Query: 1 QLDGETKRQS 10
+L+GETKR++
Sbjct: 327 ELNGETKRET 336


>sp|DPCKG_SULTO|GTP-DEPENDENT dephospho-CoA kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LDGETKRQ 9
+DG+TKRQ
Sbjct: 58 IDGKTKRQ 65


>sp|DPCKG_HALWD|GTP-DEPENDENT dephospho-CoA kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LDGETKRQS 10
+DG+TKR+S
Sbjct: 61 IDGQTKRES 69


>sp|PUR5_METM7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C7 /

Query: 1 QLDGETKRQS 10
+++GETKR++
Sbjct: 327 EVNGETKRET 336


>sp|DPCKG_AERPE|GTP-DEPENDENT dephospho-CoA kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LDGETKRQS 10
+DG+T+R+S
Sbjct: 72 VDGKTRRES 80


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QLDGETKRQ 9
++D ETKR+
Sbjct: 460 EMDAETKRK 468


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 1 QLDGETKRQS 10
QLDGET Q+
Sbjct: 424 QLDGETTVQT 433


>sp|DPCKG_SULAC|GTP-DEPENDENT dephospho-CoA kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LDGETKRQ 9
+DG+TKR+
Sbjct: 58 VDGKTKRK 65


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LDGETK 7
LDGETK
Sbjct: 286 LDGETK 291


>sp|PUR5_METMP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QLDGETKRQS 10
+++GETK+++
Sbjct: 327 EVNGETKKET 336


>sp|DPCKG_SACI6|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LDGETKR 8
+DG+TKR
Sbjct: 73 IDGKTKR 79


>sp|DPCKG_SACI4|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LDGETKR 8
+DG+TKR
Sbjct: 73 IDGKTKR 79


>sp|DPCKG_SACI3|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain M.16.27)

Query: 2 LDGETKR 8
+DG+TKR
Sbjct: 73 IDGKTKR 79


>sp|DPCKG_SACS2|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus solfataricus (strain ATCC

Query: 2 LDGETKR 8
+DG+TKR
Sbjct: 73 IDGKTKR 79


>sp|DPCKG_SACI7|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LDGETKR 8
+DG+TKR
Sbjct: 73 IDGKTKR 79


>sp|DPCKG_SACI2|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LDGETKR 8
+DG+TKR
Sbjct: 73 IDGKTKR 79


>sp|DPCKG_SACI1|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LDGETKR 8
+DG+TKR
Sbjct: 73 IDGKTKR 79


>sp|RRP41_PYRAR|EXOSOME complex component Rrp41|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 QLDGETKRQ 9
QLDG KR+
Sbjct: 200 QLDGAWKRE 208




12|SequenceR|65|56|KQHDGQLDGE

>sp|MOAA_PYRHO|PROBABLE GTP 3',8-cyclase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QHDGQLDGE 10
+GQLDGE
Sbjct: 29 HREGQLDGE 37


>sp|MOAA_PYRAB|PROBABLE GTP 3',8-cyclase|Pyrococcus abyssi (strain GE5 /

Query: 2 QHDGQLDGE 10
+GQLDGE
Sbjct: 29 HREGQLDGE 37


>sp|APGM_SULAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfolobus acidocaldarius (strain ATCC

Query: 3 HDGQLDGE 10
HDG +DG+
Sbjct: 311 HDGNIDGK 318


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 HDGQLDGE 10
HDG +DG+
Sbjct: 311 HDGNVDGK 318


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 2 QHDGQL 7
QHDG+L
Sbjct: 7 QHDGRL 12


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 QHDGQLDGE 10
QH G+L GE
Sbjct: 37 QHIGRLRGE 45


>sp|APGM1_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanothermobacter thermautotrophicus

Query: 3 HDGQLDGE 10
HDG L+G+
Sbjct: 310 HDGDLEGK 317




13|SequenceR|70|61|DLAVEKQHDG

>sp|AMPD_AERPE|ANHYDROMEVALONATE phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LAVEKQHDG 10
+AVEKQH+G
Sbjct: 324 IAVEKQHEG 332


>sp|RTCA_PYRAE|RNA 3'-terminal phosphate cyclase|Pyrobaculum aerophilum (strain ATCC

Query: 1 DLAVEKQHDG 10
D+A+E ++DG
Sbjct: 222 DIAIEVRNDG 231


>sp|SODM2_HALME|SUPEROXIDE dismutase [Mn] 2|Haloferax mediterranei (Halobacterium

Query: 1 DLAVEKQHDG 10
+LAV+K +DG
Sbjct: 105 NLAVQKHNDG 114


>sp|Y1319_METJA|UNCHARACTERIZED sodium-dependent transporter MJ1319|Methanocaldococcus jannaschii

Query: 2 LAVEKQHDG 10
LA+EK H G
Sbjct: 76 LALEKLHKG 84


>sp|MUTL_HALSA|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 1 DLAVEKQHDG 10
D+AV HDG
Sbjct: 186 DVAVSLTHDG 195


>sp|MUTL_HALS3|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 1 DLAVEKQHDG 10
D+AV HDG
Sbjct: 186 DVAVSLTHDG 195


>sp|FAU1_PYRAR|PROBABLE ribonuclease FAU-1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DLAVEKQHDG 10
DL V+K DG
Sbjct: 390 DLLVDKAFDG 399




14|SequenceR|75|66|ESSTIDLAVE

>sp|CBIA_THEVO|COBYRINATE a,c-diamide synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ESSTIDLA 8
E ST+DLA
Sbjct: 102 EGSTLDLA 109


>sp|SYS_SULAC|SERINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ESSTIDLAVE 10
++ST+D AVE
Sbjct: 26 DTSTVDKAVE 35




15|SequenceR|80|71|VDPKEESSTI

***** No hits found ******


16|SequenceR|85|76|AKDFSVDPKE

>sp|HIS8_METBF|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 AKDFSVDPKE 10
++DFS+DP++
Sbjct: 144 SQDFSIDPEK 153


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 2 KDFSVDPKE 10
KD++++PKE
Sbjct: 523 KDYNINPKE 531


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AKDFSVDPKE 10
AKD S+DP E
Sbjct: 226 AKDKSLDPAE 235


>sp|SYFB_METLZ|PHENYLALANINE--TRNA ligase beta subunit|Methanocorpusculum labreanum (strain ATCC

Query: 4 FSVDPK 9
FSVDPK
Sbjct: 84 FSVDPK 89


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 AKDFSVDPK 9
AKD ++DP+
Sbjct: 54 AKDLNLDPE 62


>sp|EF1B_AERPE|ELONGATION factor 1-beta|Aeropyrum pernix (strain ATCC 700893

Query: 3 DFSVDPK 9
D S+DPK
Sbjct: 14 DVSIDPK 20


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 KDFSVDPKE 10
K F V+PKE
Sbjct: 774 KSFVVNPKE 782


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 KDFSVDPKE 10
K F V+PKE
Sbjct: 774 KSFVVNPKE 782


>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 AKDFSVDP 8
A+ FSVDP
Sbjct: 176 AQAFSVDP 183


>sp|TFE_THEPD|TRANSCRIPTION factor E|Thermofilum pendens (strain DSM 2475

Query: 1 AKDFSVDPKE 10
AKD +DP E
Sbjct: 38 AKDLKMDPPE 47


>sp|HIS8_METAC|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DFSVDPKE 10
DFS+DP++
Sbjct: 147 DFSLDPEK 154


>sp|Y1118_ARCFU|UNCHARACTERIZED protein AF_1118|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AKDFSVDPKE 10
A+DFS+D ++
Sbjct: 20 AEDFSMDAEQ 29


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 3 DFSVDPKE 10
+ SVDP+E
Sbjct: 396 ELSVDPRE 403


>sp|PANB_NITMS|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 FSVDPKE 10
FS+DP+E
Sbjct: 263 FSMDPEE 269




17|SequenceR|90|81|AEDRIAKDFS

>sp|THII_THEKO|PROBABLE tRNA sulfurtransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 DRIAKDF 9
DRIAK+F
Sbjct: 277 DRIAKEF 283


>sp|SODM1_HALME|SUPEROXIDE dismutase [Mn] 1|Haloferax mediterranei (Halobacterium

Query: 3 DRIAKDF 9
DRIA+DF
Sbjct: 63 DRIAEDF 69


>sp|SODM1_HALSA|SUPEROXIDE dismutase [Mn] 1|Halobacterium salinarum (strain ATCC 700922

Query: 3 DRIAKDF 9
DRIA DF
Sbjct: 97 DRIAADF 103


>sp|SODM2_HALSA|SUPEROXIDE dismutase [Mn] 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 DRIAKDF 9
DRIA DF
Sbjct: 97 DRIAADF 103


>sp|OGG1_METTH|PROBABLE N-glycosylase/DNA lyase|Methanothermobacter thermautotrophicus

Query: 1 AEDRIAKDFS 10
AED + DFS
Sbjct: 173 AEDNLPSDFS 182


>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 AEDRIAKDFS 10
+ED IAK+++
Sbjct: 75 SEDEIAKEYA 84




18|SequenceR|95|86|RFHYIAEDRI

>sp|PSB_METLZ|PROTEASOME subunit beta|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RFHYIAEDRI 10
+F Y+ ED+I
Sbjct: 195 KFEYLPEDKI 204


>sp|Y1325_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1325|Methanocaldococcus

Query: 2 FHYIAEDRI 10
F+YI +DR+
Sbjct: 71 FYYIVDDRV 79


>sp|PSB_PICTO|PROTEASOME subunit beta|Picrophilus torridus (strain ATCC 700027

Query: 2 FHYIAEDRI 10
F+Y++ED I
Sbjct: 191 FYYLSEDEI 199


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 2 FHYIAEDRI 10
FHY+A R+
Sbjct: 147 FHYVASPRV 155


>sp|COFC_META3|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FHYIAEDRI 10
F+YI ED I
Sbjct: 87 FNYIEEDNI 95


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RFHYIAE 7
R HYI+E
Sbjct: 388 RLHYISE 394


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RFHYIAE 7
R HYI+E
Sbjct: 388 RLHYISE 394


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RFHYIAE 7
R HYI+E
Sbjct: 388 RLHYISE 394


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RFHYIAE 7
R HYI+E
Sbjct: 388 RLHYISE 394


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 RFHYIAE 7
R HYI+E
Sbjct: 388 RLHYISE 394


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RFHYIAE 7
R HYI+E
Sbjct: 388 RLHYISE 394


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RFHYIAE 7
R HYI+E
Sbjct: 388 RLHYISE 394


>sp|RFCS_METBF|REPLICATION factor C small subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 RFHYIAEDRI 10
R YIA+D++
Sbjct: 174 RLEYIAKDQV 183


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RFHYIAEDRI 10
R Y+A DR+
Sbjct: 719 RLEYVAGDRV 728


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 FHYIAED 8
F YIAED
Sbjct: 148 FRYIAED 154


>sp|HIS6_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 3 HYIAEDRI 10
HY+ ED I
Sbjct: 134 HYVNEDEI 141


>sp|TYW32_THEKO|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 2 FHYIAED 8
FH +AED
Sbjct: 97 FHVVAED 103




19|SequenceR|100|91|EDKLLRFHYI

>sp|TRUB_THEAC|PROBABLE tRNA pseudouridine synthase B|Thermoplasma acidophilum (strain ATCC

Query: 1 EDKLLRFHYI 10
EDKLLR H +
Sbjct: 191 EDKLLRDHIL 200


>sp|RL30_METLZ|LARGE ribosomal subunit protein uL30|Methanocorpusculum labreanum

Query: 3 KLLRFHYI 10
K+LR H+I
Sbjct: 22 KMLRLHHI 29


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EDKLLRFHY 9
+DKL+R Y
Sbjct: 242 DDKLIRVEY 250


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EDKLLRFHY 9
+DKL+R Y
Sbjct: 242 DDKLIRVEY 250


>sp|RL30_METB6|LARGE ribosomal subunit protein uL30|Methanoregula boonei (strain DSM

Query: 3 KLLRFHYI 10
K+LR H+I
Sbjct: 22 KMLRLHHI 29


>sp|RL30_METHJ|LARGE ribosomal subunit protein uL30|Methanospirillum hungatei JF-1

Query: 3 KLLRFHYI 10
K+LR H+I
Sbjct: 22 KMLRLHHI 29


>sp|Y053_METJA|UNCHARACTERIZED protein MJ0053|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDKLLRFHYI 10
E+KL R HY+
Sbjct: 180 EEKLYREHYM 189




20|SequenceR|105|96|WHDVIEDKLL

>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 WHDVIEDKL 9
WHD+ D+L
Sbjct: 466 WHDITLDEL 474


>sp|SYY_AERPE|TYROSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WHDVIEDKL 9
WH I DKL
Sbjct: 76 WHAYINDKL 84


>sp|SYY_PICTO|TYROSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 WHDVIEDKL 9
WH ++ DKL
Sbjct: 69 WHAMVNDKL 77


>sp|SYS2_METVS|TYPE-2 serine--tRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 WHDVIEDKLL 10
W D+I+DK+L
Sbjct: 493 WPDMIKDKVL 502


>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WHDVIEDKL 9
WH +I DKL
Sbjct: 73 WHAMINDKL 81


>sp|RPO1C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 2 HDVIEDKLL 10
HDVIED L
Sbjct: 11 HDVIEDTEL 19


>sp|RPO1C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 2 HDVIEDKLL 10
HDVIED L
Sbjct: 11 HDVIEDTEL 19


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 WHDVIEDKL 9
WH I DKL
Sbjct: 75 WHSWINDKL 83


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WHDVIEDKL 9
WH I DKL
Sbjct: 75 WHSWINDKL 83


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WHDVIEDKLL 10
W DVI +KL+
Sbjct: 3 WADVIAEKLI 12


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 3 DVIEDK 8
DVIEDK
Sbjct: 72 DVIEDK 77


>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HDVIEDKLL 10
HDV+ DK++
Sbjct: 201 HDVMLDKII 209


>sp|NADB_SACS2|L-ASPARTATE oxidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DVIEDKLL 10
++IEDKLL
Sbjct: 135 NLIEDKLL 142


>sp|ASSY_METVA|ARGININOSUCCINATE synthase|Methanococcus vannielii

Query: 3 DVIEDKLL 10
D+IED++L
Sbjct: 257 DIIEDRVL 264


>sp|MOBA_THEKO|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus kodakarensis

Query: 2 HDVIEDKLL 10
HDV+ D+L+
Sbjct: 62 HDVVVDELM 70


>sp|Y1654_METJA|UNCHARACTERIZED protein MJ1654|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DVIEDKLL 10
DVI+DK+L
Sbjct: 169 DVIKDKIL 176


>sp|Y1286_METJA|UNCHARACTERIZED protein MJ1286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WHDVIEDK 8
WH +IE++
Sbjct: 384 WHFIIENQ 391


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain ATCC

Query: 2 HDVIEDKL 9
HDV +DK+
Sbjct: 468 HDVSDDKI 475


>sp|Y823_METJA|UNCHARACTERIZED ATP-binding protein MJ0823|Methanocaldococcus jannaschii (strain

Query: 2 HDVIEDK 8
HD+IE++
Sbjct: 59 HDIIEER 65


>sp|MRE11_METJA|DNA double-strand break repair protein|Methanocaldococcus jannaschii

Query: 1 WHDVIEDKLL 10
W D ++DK+L
Sbjct: 287 WFDTLKDKIL 296


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 2 HDVIEDKL 9
+DV EDK+
Sbjct: 529 YDVFEDKI 536


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 2 HDVIED 7
HD+IED
Sbjct: 275 HDLIED 280


>sp|Y701_ARCFU|UNCHARACTERIZED protein AF_0701|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WHDVIEDKL 9
+HDV+E K+
Sbjct: 36 FHDVLEGKI 44


>sp|ASSY_METMP|ARGININOSUCCINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 DVIEDKLL 10
D++ED++L
Sbjct: 257 DIVEDRVL 264




21|SequenceR|110|101|GEPGRWHDVI

>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 EPGRWHDVI 10
EPG+W+ I
Sbjct: 149 EPGKWYGYI 157


>sp|BTUCA_HALSA|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 5 RWHDV 9
RWHDV
Sbjct: 228 RWHDV 232


>sp|BTUCA_HALS3|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 5 RWHDV 9
RWHDV
Sbjct: 228 RWHDV 232


>sp|METXA_METBU|HOMOSERINE O-acetyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 2 EPGRWHDVI 10
+PG W D+I
Sbjct: 71 KPGWWDDII 79


>sp|LEUC_SULTO|3-ISOPROPYLMALATE dehydratase large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GEPGRW 6
G+PG+W
Sbjct: 164 GKPGKW 169


>sp|TYW2_METJA|TRNA(PHE) (4-demethylwyosine(37)-C(7))

Query: 3 PGRWHDVI 10
PG WH V+
Sbjct: 235 PGVWHVVV 242


>sp|CMR6_PYRFU|CRISPR system Cmr subunit Cmr6|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PGRWHDVI 10
PG W+D I
Sbjct: 277 PGDWYDPI 284


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 GEPGRW 6
G PG+W
Sbjct: 164 GNPGKW 169


>sp|Y1234_STAMF|UPF0200 protein Smar_1234|Staphylothermus marinus (strain ATCC 43588

Query: 1 GEPGRWHDVI 10
G+P W D +
Sbjct: 127 GDPDNWEDFV 136


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 EPGRW 6
EPGRW
Sbjct: 515 EPGRW 519


>sp|DTDA_PYRIL|D-AMINOACYL-TRNA deacylase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PGRWHDV 9
PG W DV
Sbjct: 85 PGSWPDV 91


>sp|Y856_METJA|UNCHARACTERIZED protein MJ0856|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GRWHDVI 10
G WH VI
Sbjct: 142 GEWHGVI 148


>sp|LEUC_SULAC|3-ISOPROPYLMALATE dehydratase large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GEPGRW 6
G+P RW
Sbjct: 164 GKPARW 169


>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GEPGRWHD 8
G P RW D
Sbjct: 66 GSPSRWVD 73


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 1 GEPGRWHDV 9
G+PG W V
Sbjct: 153 GKPGSWQFV 161


>sp|HMGCS_PYRAB|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 GEPGRWHDVI 10
GEP +H VI
Sbjct: 207 GEPAYFHHVI 216


>sp|DTDA_PYRAE|D-AMINOACYL-TRNA deacylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PGRWHDV 9
PG W DV
Sbjct: 84 PGSWPDV 90


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GEPGRWHDVI 10
GEP +H +I
Sbjct: 207 GEPAYFHQII 216


>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 1 GEPGRW 6
G+PG W
Sbjct: 151 GKPGNW 156


>sp|HMGCS_THESM|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 GEPGRWHDVI 10
GEP +H +I
Sbjct: 207 GEPAYFHQII 216


>sp|NTPPA_STAMF|DTTP/UTP pyrophosphatase|Staphylothermus marinus (strain ATCC 43588

Query: 4 GRWHDV 9
G+WH V
Sbjct: 97 GKWHSV 102


>sp|PANB_PYRFU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 6 WHDVI 10
WHDV+
Sbjct: 215 WHDVL 219


>sp|PANB_PYRHO|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 WHDVI 10
WHDV+
Sbjct: 215 WHDVL 219


>sp|DTDA_PYRNV|D-AMINOACYL-TRNA deacylase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 PGRWHDV 9
PG W DV
Sbjct: 85 PGSWPDV 91


>sp|SRP19_METS3|SIGNAL recognition particle 19 kDa|Methanobrevibacter smithii (strain

Query: 3 PGRWHD 8
PG+W++
Sbjct: 55 PGKWYE 60


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GEPGRW 6
GEP RW
Sbjct: 585 GEPVRW 590


>sp|HMGCS_PYRHO|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GEPGRWHDVI 10
GEP +H V+
Sbjct: 207 GEPAYFHHVV 216


>sp|RFRNP_HALMA|RNA-FREE ribonuclease P|Haloarcula marismortui (strain ATCC 43049

Query: 2 EPGRWHD 8
+P RW D
Sbjct: 216 DPDRWRD 222


>sp|RL15E_HALMA|LARGE ribosomal subunit protein eL15|Haloarcula marismortui (strain ATCC

Query: 1 GEPGR--WHDVI 10
G+ GR WH+VI
Sbjct: 122 GQDGRQKWHEVI 133


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 GEPGRWHD 8
GEP +W +
Sbjct: 277 GEPEKWKE 284




22|SequenceR|115|106|EHLPHGEPGR

>sp|Y735_METS5|UPF0284 protein Msed_0735|Metallosphaera sedula (strain ATCC 51363

Query: 5 HGEPGR 10
HGEPGR
Sbjct: 111 HGEPGR 116


>sp|TRPD_SACI7|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 LPHGEPG 9
L HGEPG
Sbjct: 215 LVHGEPG 221


>sp|TRPD_SACI6|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 LPHGEPG 9
L HGEPG
Sbjct: 215 LVHGEPG 221


>sp|TRPD_SACI4|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 3 LPHGEPG 9
L HGEPG
Sbjct: 215 LVHGEPG 221


>sp|TRPD_SACI3|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 3 LPHGEPG 9
L HGEPG
Sbjct: 215 LVHGEPG 221


>sp|TRPD_SACI2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 3 LPHGEPG 9
L HGEPG
Sbjct: 215 LVHGEPG 221


>sp|TRPD_SACI1|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 LPHGEPG 9
L HGEPG
Sbjct: 215 LVHGEPG 221


>sp|TRPD_SULAC|ANTHRANILATE phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 5 HGEPG 9
HGEPG
Sbjct: 212 HGEPG 216


>sp|TRPD_CALMQ|ANTHRANILATE phosphoribosyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 3 LPHGEPG 9
L HGEPG
Sbjct: 216 LVHGEPG 222


>sp|TRPD_METS5|ANTHRANILATE phosphoribosyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 3 LPHGEPG 9
L HGEPG
Sbjct: 215 LVHGEPG 221


>sp|EF1A_META3|ELONGATION factor 1-alpha|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EHLPHGEPG 9
E LP EPG
Sbjct: 280 EQLPKAEPG 288


>sp|EF1A_METMP|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain DSM 14266

Query: 1 EHLPHGEPG 9
E LP EPG
Sbjct: 280 EQLPSAEPG 288


>sp|EF1A_METM5|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C5 /

Query: 1 EHLPHGEPG 9
E LP EPG
Sbjct: 280 EQLPSAEPG 288


>sp|MCH_METHJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EHLPHGE 7
+HLP+GE
Sbjct: 142 DHLPNGE 148


>sp|EF1A_METM7|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C7 /

Query: 1 EHLPHGEPG 9
E LP EPG
Sbjct: 280 EQLPSAEPG 288


>sp|EF1A_METM6|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C6 /

Query: 1 EHLPHGEPG 9
E LP EPG
Sbjct: 280 EQLPSAEPG 288


>sp|EF1A_METVA|ELONGATION factor 1-alpha|Methanococcus vannielii

Query: 1 EHLPHGEPG 9
E LP EPG
Sbjct: 280 EQLPSAEPG 288


>sp|EF1A_METVS|ELONGATION factor 1-alpha|Methanococcus vannielii (strain ATCC 35089

Query: 1 EHLPHGEPG 9
E LP EPG
Sbjct: 280 EQLPSAEPG 288


>sp|GLYA_METBF|SERINE hydroxymethyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 HLPHGEP 8
HL HG P
Sbjct: 122 HLSHGSP 128


>sp|GLYA_METAC|SERINE hydroxymethyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 HLPHGEP 8
HL HG P
Sbjct: 122 HLSHGSP 128


>sp|PSA2_HALVD|PROTEASOME subunit alpha 2|Haloferax volcanii (strain ATCC 29605

Query: 1 EHLPHGEP 8
EHL +GEP
Sbjct: 100 EHLRYGEP 107


>sp|MCH_METPE|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 EHLPHGE 7
+HLP+GE
Sbjct: 142 DHLPNGE 148


>sp|GLYA_METMA|SERINE hydroxymethyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HLPHGEP 8
HL HG P
Sbjct: 122 HLSHGSP 128


>sp|CHEB_HALMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Haloarcula marismortui

Query: 1 EHLPHGEPGR 10
+H+P G GR
Sbjct: 211 QHMPEGFTGR 220


>sp|G6PI_HALWD|PROBABLE glucose-6-phosphate isomerase|Haloquadratum walsbyi (strain DSM

Query: 3 LPHGEPGR 10
+P G PGR
Sbjct: 182 VPEGVPGR 189


>sp|GLYA_METHJ|SERINE hydroxymethyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 2 HLPHGEP 8
HL HG P
Sbjct: 122 HLSHGSP 128


>sp|GLYA_METPE|SERINE hydroxymethyltransferase|Methanosphaerula palustris (strain ATCC

Query: 2 HLPHGEP 8
HL HG P
Sbjct: 123 HLSHGSP 129


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 2 HLPHGEPGR 10
HL +GEP R
Sbjct: 155 HLDNGEPQR 163


>sp|RADA_SACS2|DNA repair and recombination protein|Saccharolobus solfataricus (strain

Query: 2 HLPHGE 7
HLP GE
Sbjct: 304 HLPEGE 309


>sp|RADA_SACI7|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 2 HLPHGE 7
HLP GE
Sbjct: 304 HLPEGE 309


>sp|RADA_SACI6|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 2 HLPHGE 7
HLP GE
Sbjct: 304 HLPEGE 309


>sp|RADA_SACI4|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 2 HLPHGE 7
HLP GE
Sbjct: 304 HLPEGE 309


>sp|RADA_SACI3|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 2 HLPHGE 7
HLP GE
Sbjct: 304 HLPEGE 309


>sp|RADA_SACI2|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 2 HLPHGE 7
HLP GE
Sbjct: 304 HLPEGE 309


>sp|RADA_SACI1|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 2 HLPHGE 7
HLP GE
Sbjct: 304 HLPEGE 309


>sp|RADA_METS5|DNA repair and recombination protein|Metallosphaera sedula (strain ATCC

Query: 2 HLPHGE 7
HLP GE
Sbjct: 304 HLPEGE 309


>sp|CHEB_NATPD|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Natronomonas pharaonis

Query: 1 EHLPHGEPGR 10
+H+P G GR
Sbjct: 199 QHMPDGFTGR 208


>sp|RS19_HYPBU|SMALL ribosomal subunit protein uS19|Hyperthermus butylicus (strain DSM

Query: 1 EHLPHGEPG 9
+ + HGEPG
Sbjct: 123 KQVQHGEPG 131


>sp|RADA_SULAC|DNA repair and recombination protein|Sulfolobus acidocaldarius (strain

Query: 2 HLPHGE 7
HLP GE
Sbjct: 301 HLPEGE 306


>sp|HEM12_PYRAR|GLUTAMYL-TRNA reductase 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PHGEP 8
PHGEP
Sbjct: 392 PHGEP 396


>sp|RL30_HALWD|LARGE ribosomal subunit protein uL30|Haloquadratum walsbyi (strain DSM

Query: 1 EHLPHGEPG 9
E++ HGEP
Sbjct: 50 EYVAHGEPS 58


>sp|RADA_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 2 HLPHGE 7
HLP GE
Sbjct: 294 HLPEGE 299


>sp|RS19_METS5|SMALL ribosomal subunit protein uS19|Metallosphaera sedula (strain ATCC

Query: 1 EHLPHGEPG 9
+ + HGEPG
Sbjct: 118 QKVEHGEPG 126


>sp|RL1_THEPD|LARGE ribosomal subunit protein uL1|Thermofilum pendens (strain DSM

Query: 3 LPHGEPGR 10
LPH PG+
Sbjct: 57 LPHPAPGK 64


>sp|RS19_STAMF|SMALL ribosomal subunit protein uS19|Staphylothermus marinus (strain ATCC

Query: 1 EHLPHGEPG 9
+ + HGEPG
Sbjct: 122 KRVQHGEPG 130


>sp|RADA_SULTO|DNA repair and recombination protein|Sulfurisphaera tokodaii (strain

Query: 2 HLPHGE 7
HLP GE
Sbjct: 304 HLPEGE 309


>sp|RADA_AERPX|DNA repair and recombination protein|Aeropyrum pernix

Query: 2 HLPHGE 7
HLP GE
Sbjct: 300 HLPEGE 305


>sp|RADA_AERPE|DNA repair and recombination protein|Aeropyrum pernix (strain ATCC

Query: 2 HLPHGE 7
HLP GE
Sbjct: 300 HLPEGE 305


>sp|G6PI_NATPD|PROBABLE glucose-6-phosphate isomerase|Natronomonas pharaonis (strain ATCC

Query: 3 LPHGEPGR 10
+P G PGR
Sbjct: 180 VPEGVPGR 187


>sp|RS19_IGNH4|SMALL ribosomal subunit protein uS19|Ignicoccus hospitalis (strain KIN4/I

Query: 3 LPHGEPG 9
+ HGEPG
Sbjct: 120 VKHGEPG 126


>sp|RADA_METST|DNA repair and recombination protein|Methanosphaera stadtmanae (strain

Query: 2 HLPHGE 7
HLP GE
Sbjct: 294 HLPEGE 299


>sp|NADK_PYRHO|NAD kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EHLPHGEPG 9
EH PH + G
Sbjct: 40 EHFPHFKEG 48


>sp|RS19_SULAC|SMALL ribosomal subunit protein uS19|Sulfolobus acidocaldarius (strain

Query: 1 EHLPHGEPG 9
+ + HGEPG
Sbjct: 118 KKVEHGEPG 126


>sp|RS19_SULTO|SMALL ribosomal subunit protein uS19|Sulfurisphaera tokodaii (strain DSM

Query: 1 EHLPHGEPG 9
+ + HGEPG
Sbjct: 118 KKVEHGEPG 126


>sp|COBQ_HALMA|PROBABLE cobyric acid synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 LPHGEPG 9
LPH +PG
Sbjct: 224 LPHDDPG 230


>sp|RADA_DESA1|DNA repair and recombination protein|Desulfurococcus amylolyticus

Query: 2 HLPHGE 7
HLP GE
Sbjct: 307 HLPEGE 312


>sp|RADA_DESAM|DNA repair and recombination protein|Desulfurococcus amylolyticus

Query: 2 HLPHGE 7
HLP GE
Sbjct: 307 HLPEGE 312




23|SequenceR|120|111|QELLVEHLPH

>sp|ARGB_ARCFU|ACETYLGLUTAMATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ELLVEHLPH 10
ELL+E LP+
Sbjct: 5 ELLIEALPY 13


>sp|Y2657_METHJ|UPF0210 protein Mhun_2657|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ELLVEHLPH 10
ELL+ +PH
Sbjct: 130 ELLIRSIPH 138


>sp|CHEB_THEKO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Thermococcus

Query: 3 LLVEHLP 9
LLV+H+P
Sbjct: 195 LLVQHMP 201


>sp|CHEB_PYRHO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus horikoshii

Query: 3 LLVEHLP 9
LLV+H+P
Sbjct: 196 LLVQHMP 202


>sp|CHEB_PYRAB|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus abyssi

Query: 3 LLVEHLP 9
LLV+H+P
Sbjct: 196 LLVQHMP 202


>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 1 QELLVEHLPH 10
Q LLV++L H
Sbjct: 355 QNLLVKYLSH 364


>sp|ARGB_META3|ACETYLGLUTAMATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 ELLVEHLPH 10
E+L+E LP+
Sbjct: 8 EVLIESLPY 16


>sp|UPPS_THEKO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermococcus

Query: 4 LVEHLPH 10
LV H+PH
Sbjct: 5 LVSHIPH 11


>sp|COBQ_HALSA|PROBABLE cobyric acid synthase|Halobacterium salinarum (strain ATCC 700922

Query: 5 VEHLPH 10
V HLPH
Sbjct: 280 VPHLPH 285


>sp|COBQ_HALS3|PROBABLE cobyric acid synthase|Halobacterium salinarum (strain ATCC 29341

Query: 5 VEHLPH 10
V HLPH
Sbjct: 280 VPHLPH 285


>sp|RL10E_PYRAE|LARGE ribosomal subunit protein uL16|Pyrobaculum aerophilum (strain ATCC

Query: 2 ELLVEHLPH 10
E EHLPH
Sbjct: 140 EFKPEHLPH 148


>sp|ARGB_METVS|ACETYLGLUTAMATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 ELLVEHLPH 10
E+L+E LP+
Sbjct: 8 EILIEALPY 16


>sp|ARGB_METM5|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C5 /

Query: 2 ELLVEHLPH 10
E+L+E LP+
Sbjct: 8 EILIEALPY 16


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 ELLVEHLPH 10
+++V+HLP+
Sbjct: 250 DMVVKHLPN 258


>sp|ARGB_METMP|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ELLVEHLPH 10
E+L+E LP+
Sbjct: 8 EILIEALPY 16


>sp|ARGB_METM6|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C6 /

Query: 2 ELLVEHLPH 10
E+L+E LP+
Sbjct: 8 EILIEALPY 16


>sp|ARGB_METM7|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C7 /

Query: 2 ELLVEHLPH 10
E+L+E LP+
Sbjct: 8 EILIEALPY 16




24|SequenceR|125|116|WVVKAQELLV

>sp|HIS6_METS3|IMIDAZOLE glycerol phosphate synthase subunit|Methanobrevibacter smithii

Query: 1 WVVKAQEL 8
W VK QEL
Sbjct: 179 WAVKCQEL 186


>sp|PYRC_PYRAB|DIHYDROOROTASE abyssi (strain GE5 /

Query: 1 WVVKAQEL 8
W +KA+E
Sbjct: 348 WTIKAEEF 355




25|SequenceR|130|121|KGRFQWVVKA

>sp|HIS7_PYRCJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GRFQWVVKA 10
GR WVVKA
Sbjct: 107 GRPYWVVKA 115


>sp|UVRC_HALMA|UVRABC system protein C|Haloarcula marismortui (strain ATCC 43049

Query: 1 KGRFQWVVKA 10
KGR + VVKA
Sbjct: 134 KGRVETVVKA 143


>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 KGRFQWVVKA 10
KGR + VVKA
Sbjct: 130 KGRVETVVKA 139


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 2 GRFQWVVK 9
G F+W++K
Sbjct: 17 GNFEWIIK 24


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 GRFQWVVKA 10
GRF W + A
Sbjct: 37 GRFFWTLNA 45


>sp|Y1462_ARCFU|UNCHARACTERIZED protein AF_1462|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KGRFQWVVKA 10
KGR ++VKA
Sbjct: 25 KGRMSYIVKA 34




26|SequenceR|135|126|KDLDEKGRFQ

>sp|KPTA_PYRAE|PROBABLE RNA 2'-phosphotransferase|Pyrobaculum aerophilum (strain ATCC

Query: 3 LDEKGRFQ 10
LDEKGRF+
Sbjct: 88 LDEKGRFE 95


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 2 DLDEKGRF 9
DLDE GRF
Sbjct: 35 DLDEDGRF 42


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 1 KDLDEKGRF 9
K+ DEKG F
Sbjct: 321 KNFDEKGTF 329


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KDLDEKGRF 9
K LDE+GRF
Sbjct: 395 KALDEEGRF 403


>sp|KPTA_METAC|PROBABLE RNA 2'-phosphotransferase|Methanosarcina acetivorans (strain ATCC

Query: 4 DEKGRFQ 10
DEKGR+Q
Sbjct: 88 DEKGRYQ 94


>sp|KPTA_METMA|PROBABLE RNA 2'-phosphotransferase|Methanosarcina mazei (strain ATCC

Query: 4 DEKGRFQ 10
DEKGR+Q
Sbjct: 88 DEKGRYQ 94


>sp|MVK_THEGJ|MEVALONATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DLDEKGRFQ 10
DL+EK RF+
Sbjct: 238 DLEEKIRFE 246


>sp|1A1D_PYRFU|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus furiosus

Query: 1 KDLDEKGR 8
K+L+EKGR
Sbjct: 142 KELEEKGR 149


>sp|GALE_METJA|PUTATIVE UDP-glucose 4-epimerase|Methanocaldococcus jannaschii (strain

Query: 1 KDLDEKGRFQ 10
KDLDEK F+
Sbjct: 54 KDLDEKINFK 63


>sp|GSA_METS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KDLDEKGRF 9
KDL+ KG F
Sbjct: 315 KDLERKGNF 323


>sp|Y719_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 KDLDEKGRF 9
K +DEKG+F
Sbjct: 196 KKVDEKGKF 204


>sp|RS4E_METS3|SMALL ribosomal subunit protein eS4|Methanobrevibacter smithii (strain

Query: 3 LDEKGRFQ 10
LD+KGR Q
Sbjct: 104 LDKKGRLQ 111


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KDLDEKGR 8
KDL+EKG+
Sbjct: 399 KDLNEKGK 406


>sp|IMDH_PYRFU|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KDLDEKGRF 9
K+L EKG F
Sbjct: 448 KELKEKGEF 456


>sp|COFC_METMJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 LDEKGR 8
LDEKGR
Sbjct: 198 LDEKGR 203


>sp|IMDH_PYRAB|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 KDLDEKGRF 9
K+L EKG F
Sbjct: 448 KELKEKGEF 456


>sp|Y1429_THEAC|UPF0159 protein Ta1429|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KDLDEKGR 8
K+LDE GR
Sbjct: 159 KELDENGR 166


>sp|KPTA_PYRHO|PROBABLE RNA 2'-phosphotransferase|Pyrococcus horikoshii (strain ATCC

Query: 4 DEKGRFQ 10
DEKGR++
Sbjct: 58 DEKGRYE 64


>sp|AMZA_SULAC|ARCHAEMETZINCIN acidocaldarius (strain ATCC 33909

Query: 1 KDLDEKGRF 9
+D+D+KG++
Sbjct: 154 EDVDKKGKY 162


>sp|KPTA_METBF|PROBABLE RNA 2'-phosphotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 4 DEKGRFQ 10
DEKGR++
Sbjct: 88 DEKGRYE 94


>sp|CAS3_METJA|PUTATIVE CRISPR-associated nuclease/helicase Cas3|Methanocaldococcus

Query: 3 LDEKGRF 9
+DE+GRF
Sbjct: 630 IDEEGRF 636


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 3 LDEKGRF 9
+DEKG F
Sbjct: 238 IDEKGEF 244


>sp|Y772_METJA|UNCHARACTERIZED protein MJ0772|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DLDEKGRFQ 10
+LDE G F+
Sbjct: 27 ELDENGNFE 35


>sp|TRPD_METJA|ANTHRANILATE phosphoribosyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 KDLDEK 6
KDLDEK
Sbjct: 13 KDLDEK 18




27|SequenceR|140|131|STVTWKDLDE

>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 TVTWKD 7
TVTW+D
Sbjct: 325 TVTWRD 330


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 1 STVTWKDLDE 10
S ++W DLD+
Sbjct: 567 SQLSWNDLDD 576


>sp|RL30_NANEQ|LARGE ribosomal subunit protein uL30|Nanoarchaeum equitans (strain

Query: 3 VTWKDLDE 10
+TW ++DE
Sbjct: 54 ITWGEIDE 61


>sp|HDRC1_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 3 VTWKDLDE 10
V WKD+ E
Sbjct: 187 VEWKDMSE 194


>sp|RPO12_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo12|Sulfolobus acidocaldarius (strain

Query: 5 WKDLDE 10
WK+LD+
Sbjct: 10 WKELDD 15


>sp|TRM56_THEVO|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma volcanium

Query: 1 STVTWKDLDE 10
STV +D+DE
Sbjct: 328 STVIGQDMDE 337


>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 3 VTWKDLDE 10
++WK LD+
Sbjct: 344 ISWKRLDD 351


>sp|Y756_METJA|UNCHARACTERIZED protein MJ0756|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VTWKDLD 9
V WKD+D
Sbjct: 70 VLWKDVD 76


>sp|Y332_METJA|UNCHARACTERIZED protein MJ0332|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 STVTWKDLDE 10
S WK LDE
Sbjct: 4 SMSLWKKLDE 13


>sp|RL3_METST|LARGE ribosomal subunit protein uL3|Methanosphaera stadtmanae (strain

Query: 4 TWKDLDE 10
TW +LDE
Sbjct: 29 TWPELDE 35


>sp|Y1515_METJA|UNCHARACTERIZED protein MJ1515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TVTWKDLD 9
TV W DL+
Sbjct: 318 TVNWDDLE 325


>sp|FEN_METMJ|FLAP endonuclease 1|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TVTWKDL 8
T+TW DL
Sbjct: 15 TLTWDDL 21


>sp|THYX_SULAC|FLAVIN-DEPENDENT thymidylate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VTWKDLDE 10
+ WK LDE
Sbjct: 180 IAWKMLDE 187




28|SequenceR|145|136|GITKDSTVTW

>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 TKDSTVTW 10
TKD TV W
Sbjct: 155 TKDKTVYW 162


>sp|CDC62_THEAC|ORC1-TYPE DNA replication protein 2|Thermoplasma acidophilum (strain ATCC

Query: 1 GITKDSTV 8
GIT D+TV
Sbjct: 176 GITNDTTV 183


>sp|RL5_ARCFU|LARGE ribosomal subunit protein uL5|Archaeoglobus fulgidus (strain ATCC

Query: 2 ITKDSTVTW 10
+TK+ T+ W
Sbjct: 161 VTKEDTIRW 169


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 3 TKDSTVTW 10
T+DS V W
Sbjct: 308 TRDSRVKW 315


>sp|Y692_METTH|UNCHARACTERIZED protein MTH_692|Methanothermobacter thermautotrophicus (strain

Query: 2 ITKDSTV 8
ITKD+TV
Sbjct: 72 ITKDNTV 78


>sp|DHYS_SACI6|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GITKDSTVTW 10
GI+K T+ W
Sbjct: 240 GISKHHTIWW 249


>sp|DHYS_SACI7|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GITKDSTVTW 10
GI+K T+ W
Sbjct: 240 GISKHHTIWW 249


>sp|DHYS_SACI4|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GITKDSTVTW 10
GI+K T+ W
Sbjct: 240 GISKHHTIWW 249


>sp|DHYS_SACI3|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.16.27)

Query: 1 GITKDSTVTW 10
GI+K T+ W
Sbjct: 240 GISKHHTIWW 249


>sp|DHYS_SACI2|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GITKDSTVTW 10
GI+K T+ W
Sbjct: 240 GISKHHTIWW 249


>sp|DHYS_SACI1|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GITKDSTVTW 10
GI+K T+ W
Sbjct: 240 GISKHHTIWW 249


>sp|DNAJ_NATPD|CHAPERONE protein DnaJ|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GITKDSTVT 9
G+TK TVT
Sbjct: 141 GVTKQLTVT 149


>sp|DHYS_METS5|PROBABLE deoxyhypusine synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GITKDSTVTW 10
GI+K T+ W
Sbjct: 238 GISKHHTIWW 247


>sp|DHYS_SULAC|PROBABLE deoxyhypusine synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GITKDSTVTW 10
GI+K T+ W
Sbjct: 239 GISKHHTIWW 248


>sp|ILVE_METTH|PUTATIVE branched-chain-amino-acid aminotransferase|Methanothermobacter

Query: 1 GITKDSTV 8
GIT+DS +
Sbjct: 219 GITRDSVI 226


>sp|TOP6B_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 2 ITKDSTVTW 10
I+ D T TW
Sbjct: 168 ISVDETTTW 176




29|SequenceR|150|141|VESRGGITKD

>sp|GUAAB_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit B|Archaeoglobus fulgidus

Query: 1 VESRGGITKD 10
VESR G+T D
Sbjct: 253 VESRDGMTAD 262


>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 1 VESRGGITK 9
VES+GG+++
Sbjct: 871 VESQGGVSR 879


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 VESRGGIT 8
+ SRGG+T
Sbjct: 123 ISSRGGVT 130


>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VESRGGI 7
VE+RGGI
Sbjct: 460 VENRGGI 466


>sp|GVPH1_HALSA|GAS vesicle protein H1|Halobacterium salinarum (strain ATCC 700922

Query: 1 VESRGGITKD 10
VE+RGG + D
Sbjct: 99 VETRGGTSGD 108


>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 3 SRGGITKD 10
SRGG+T D
Sbjct: 168 SRGGVTVD 175


>sp|PSB2_PYRAB|PROTEASOME subunit beta 2|Pyrococcus abyssi (strain GE5 /

Query: 1 VESRGGITKD 10
V+ GGIT+D
Sbjct: 123 VDMMGGITED 132




30|SequenceR|155|146|GMKLFVESRG

>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 2 MKLFVESRG 10
M+LF+ES G
Sbjct: 593 MRLFLESVG 601


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 2 MKLFVESRG 10
M+LF+ES G
Sbjct: 593 MRLFLESVG 601


>sp|Y618_METMP|UNCHARACTERIZED protein MMP0618|Methanococcus maripaludis (strain DSM 14266

Query: 2 MKLFVESRG 10
+KLFVES+
Sbjct: 5 LKLFVESQN 13


>sp|Y618_METMI|UNCHARACTERIZED protein in radB 5'region|Methanococcus maripaludis (Methanococcus

Query: 2 MKLFVESRG 10
+KLFVES+
Sbjct: 5 LKLFVESQN 13




31|SequenceR|160|151|SQNNKGMKLF

>sp|IF2P_THEVO|PROBABLE translation initiation factor IF-2|Thermoplasma volcanium (strain

Query: 3 NNKGMKL 9
NNKGMK+
Sbjct: 71 NNKGMKI 77


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SQNNKGMKLF 10
++N KG++LF
Sbjct: 385 AKNKKGLELF 394


>sp|COFH_METAR|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocella arvoryzae (strain DSM

Query: 2 QNNKGMKL 9
+NNKG +L
Sbjct: 70 KNNKGFRL 77




32|SequenceR|165|156|GYLLASQNNK

>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GYLLASQNNK 10
GY LAS NK
Sbjct: 310 GYYLASAVNK 319


>sp|Y1457_METJA|UNCHARACTERIZED protein MJ1457|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GYLLASQNNK 10
GYL+ S+ NK
Sbjct: 28 GYLIFSRKNK 37


>sp|QUED_PYRAB|PUTATIVE 6-carboxy-5,6,7,8-tetrahydropterin synthase|Pyrococcus abyssi

Query: 1 GYLLASQNNK 10
GY+L +N+K
Sbjct: 84 GYVLIEKNDK 93


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GYLLASQNN 9
GYL +QNN
Sbjct: 455 GYLEKTQNN 463




33|SequenceR|170|161|ESSLTGYLLA

>sp|RL18_SULTO|LARGE ribosomal subunit protein uL18|Sulfurisphaera tokodaii (strain

Query: 4 LTGYLLA 10
LTGYLL
Sbjct: 85 LTGYLLG 91


>sp|MFNA_METBF|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina barkeri

Query: 1 ESSLTGYL 8
ESS+ GYL
Sbjct: 90 ESSVCGYL 97




34|SequenceR|175|166|GDQPAESSLT

***** No hits found ******


35|SequenceR|180|171|SRTSEGDQPA

>sp|RPO10_METBU|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanococcoides burtonii (strain

Query: 2 RTSEGDQPA 10
RT EG+ PA
Sbjct: 23 RTGEGEDPA 31


>sp|DNAG_METMJ|DNA primase DnaG|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 RTSEGDQP 9
RTSEG++P
Sbjct: 300 RTSEGERP 307


>sp|BSUHB_METTH|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE thermautotrophicus (strain ATCC 29096

Query: 4 SEGDQPA 10
SEGD+P
Sbjct: 82 SEGDEPG 88


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 SEGDQPA 10
SEGD+P+
Sbjct: 222 SEGDRPS 228




36|SequenceR|185|176|MACYGSRTSE

>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 1 MACYGSR 7
+ACYG +
Sbjct: 298 LACYGEK 304




37|SequenceR|190|181|PIRSIMACYG

>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 1 PIRSIMACYG 10
PI SI+ C G
Sbjct: 340 PIESILECLG 349


>sp|GGR_METMJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PIRSIMAC 8
P+R +M+C
Sbjct: 173 PLREMMSC 180




38|SequenceR|195|186|EFAGRPIRSI

>sp|AROD_METHJ|3-DEHYDROQUINATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 FAGRPIRS 9
F GRP+RS
Sbjct: 230 FEGRPVRS 237


>sp|FLPA_METHJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanospirillum hungatei JF-1

Query: 1 EFAGRPIRSI 10
EF+ RP+RS+
Sbjct: 76 EFSPRPVRSL 85


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 FAGRPIRS 9
FAGRP+R
Sbjct: 410 FAGRPVRE 417


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FAGRPIRS 9
FAGRP+R
Sbjct: 410 FAGRPVRE 417


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 FAGRPIR 8
FAGRP+R
Sbjct: 410 FAGRPVR 416


>sp|FLPA_HALWD|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Haloquadratum walsbyi (strain DSM

Query: 1 EFAGRPIRSI 10
EFA RP+R +
Sbjct: 92 EFAPRPVRDL 101


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 FAGRPIR 8
FAGRP+R
Sbjct: 410 FAGRPVR 416


>sp|FLPA_HALMA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Haloarcula marismortui (strain

Query: 1 EFAGRPIRSI 10
EFA RP+R +
Sbjct: 87 EFAPRPVREL 96


>sp|METE_METTM|METHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 EFAGRP 6
EFAGRP
Sbjct: 224 EFAGRP 229


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 1 EFAGRPIRSI 10
+F+GR IRS+
Sbjct: 99 DFSGRVIRSL 108


>sp|METE_METTH|METHIONINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EFAGRP 6
EFAGRP
Sbjct: 224 EFAGRP 229


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 1 EFAGRPIRSI 10
EF G P+++I
Sbjct: 485 EFVGVPLKTI 494


>sp|RTCA_IGNH4|RNA 3'-terminal phosphate cyclase|Ignicoccus hospitalis (strain KIN4/I

Query: 1 EFAGRPIRSI 10
EFA RP+ S+
Sbjct: 165 EFASRPVDSL 174


>sp|LYSY_SULAC|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EFAGRPIRSI 10
E+AG+PI I
Sbjct: 36 EYAGKPISII 45


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 FAGRPIR 8
FAGRP++
Sbjct: 410 FAGRPVK 416


>sp|LYSY_AERPE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 EFAGRPIRS 9
E+AG+P+ +
Sbjct: 39 EYAGKPVHT 47


>sp|DNLI1_METBF|DNA ligase 1|Methanosarcina barkeri (strain Fusaro /

Query: 4 GRPIRSI 10
GRP+RS+
Sbjct: 184 GRPVRSM 190


>sp|LYSY_SULTO|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EFAGRPI 7
E+AG+PI
Sbjct: 36 EYAGKPI 42


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 1 EFAGRPIRSI 10
E+AG IRS+
Sbjct: 196 EYAGSTIRSL 205


>sp|COBQ_THEKO|PROBABLE cobyric acid synthase|Thermococcus kodakarensis (strain ATCC

Query: 2 FAGRPIRSI 10
F GRPI S+
Sbjct: 91 FMGRPIGSV 99


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 1 EFAGRPIRSI 10
E+AG IRS+
Sbjct: 196 EYAGSTIRSL 205


>sp|LYSY_SACS2|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EFAGRPIRSI 10
E+AG+P+ I
Sbjct: 39 EYAGKPVSLI 48


>sp|TRPB2_METTM|TRYPTOPHAN synthase beta chain 2|Methanothermobacter marburgensis (strain

Query: 1 EFAGRP 6
E+AGRP
Sbjct: 47 EYAGRP 52


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei (strain

Query: 2 FAGRPIRSI 10
F G+P+R I
Sbjct: 258 FCGKPLRPI 266


>sp|TRKA_PYRAB|TRK system potassium uptake protein|Pyrococcus abyssi (strain GE5 /

Query: 1 EFAGRPIRSI 10
E AG+PI+ +
Sbjct: 163 EVAGKPIKEL 172


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 EFAGRPIR 8
EF G P+R
Sbjct: 398 EFEGTPVR 405


>sp|COBS_METKA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 FAGRPIR 8
FAG P+R
Sbjct: 54 FAGTPVR 60


>sp|TRKA_PYRHO|TRK system potassium uptake protein|Pyrococcus horikoshii (strain ATCC

Query: 1 EFAGRPIRSI 10
E AG+P++ +
Sbjct: 163 EVAGKPVKEL 172


>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EFAGRPIRSI 10
E AG+P R +
Sbjct: 613 EIAGKPYRKL 622


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EFAGRPIRSI 10
E AG+P R +
Sbjct: 613 EIAGKPYRKL 622




39|SequenceR|200|191|YSMKREFAGR

>sp|HEM4_METTH|PUTATIVE uroporphyrinogen-III synthase|Methanothermobacter

Query: 1 YSMKREFAGR 10
+ + REFAG+
Sbjct: 65 FQLCREFAGK 74


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 SMKREFAGR 10
S K+EF GR
Sbjct: 821 SFKKEFKGR 829


>sp|HIS7_METJA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YSMKREFAG 9
Y KREF G
Sbjct: 122 YEPKREFVG 130




40|SequenceR|205|196|FQSWDYSMKR

>sp|AROC_SULTO|CHORISMATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FQSWDY 6
F++WDY
Sbjct: 116 FENWDY 121


>sp|RL6_NATPD|LARGE ribosomal subunit protein uL6|Natronomonas pharaonis (strain ATCC

Query: 2 QSWDYSMK 9
+ W+YSM+
Sbjct: 78 EGWEYSME 85


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 1 FQSWDYSMKR 10
+Q W MKR
Sbjct: 187 YQRWPVRMKR 196


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus vannielii

Query: 2 QSWDYS 7
+SWDY+
Sbjct: 174 KSWDYA 179


>sp|PURT_METM7|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 2 QSWDYS 7
+SWDY+
Sbjct: 174 KSWDYA 179


>sp|PURT_METM5|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 2 QSWDYS 7
+SWDY+
Sbjct: 174 KSWDYA 179


>sp|AROC_SULAC|CHORISMATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FQSWDY 6
+++WDY
Sbjct: 116 YENWDY 121


>sp|AROC_SACS2|CHORISMATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FQSWDY 6
+++WDY
Sbjct: 116 YENWDY 121


>sp|AROC_SACI7|CHORISMATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 FQSWDY 6
+++WDY
Sbjct: 116 YENWDY 121


>sp|AROC_SACI6|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 FQSWDY 6
+++WDY
Sbjct: 116 YENWDY 121


>sp|AROC_SACI4|CHORISMATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 FQSWDY 6
+++WDY
Sbjct: 116 YENWDY 121


>sp|AROC_SACI3|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 FQSWDY 6
+++WDY
Sbjct: 116 YENWDY 121


>sp|AROC_SACI2|CHORISMATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 FQSWDY 6
+++WDY
Sbjct: 116 YENWDY 121


>sp|AROC_SACI1|CHORISMATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 FQSWDY 6
+++WDY
Sbjct: 116 YENWDY 121


>sp|AROC_METS5|CHORISMATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 FQSWDY 6
+++WDY
Sbjct: 116 YENWDY 121


>sp|CP119_SULTO|CYTOCHROME P450 119|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FQSWDY 6
+ SWDY
Sbjct: 229 YNSWDY 234


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FQSWDYSMK 9
FQ WD K
Sbjct: 71 FQDWDMEAK 79


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 QSWDYSM 8
++WDY M
Sbjct: 546 ETWDYIM 552




41|SequenceR|210|201|LYLTNFQSWD

>sp|TSR3_METJA|16S rRNA aminocarboxypropyltransferase|Methanocaldococcus jannaschii

Query: 1 LYLTNF--QSWD 10
LY+TNF ++WD
Sbjct: 120 LYITNFKDEAWD 131


>sp|SYS_METMJ|SERINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LYLTNFQSWD 10
+Y T QSWD
Sbjct: 289 IYATPEQSWD 298


>sp|AMZA_NANEQ|ARCHAEMETZINCIN equitans (strain Kin4-M)

Query: 1 LYLTNFQS 8
LYL NFQS
Sbjct: 3 LYLVNFQS 10


>sp|HIS5_SULTO|IMIDAZOLE glycerol phosphate synthase subunit|Sulfurisphaera tokodaii (strain

Query: 1 LYLTNFQSW 9
++L NF SW
Sbjct: 185 IFLRNFYSW 193


>sp|SYY_NANEQ|TYROSINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LYLTNFQSW 9
L+L ++ SW
Sbjct: 70 LFLADYHSW 78


>sp|AATA_DESSY|A-TYPE ATP synthase subunit A|Desulfurococcus sp. (strain SY)

Query: 1 LYLTNFQSW 9
LYL + Q W
Sbjct: 435 LYLDSIQDW 443


>sp|GCH1L_METTH|GTP cyclohydrolase 1 type 2|Methanothermobacter thermautotrophicus

Query: 2 YLTNFQSWD 10
YLT +WD
Sbjct: 72 YLTVHSNWD 80


>sp|HDRE_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina barkeri

Query: 3 LTNFQSW 9
++NFQ W
Sbjct: 38 ISNFQKW 44




42|SequenceR|215|206|DGRVRLYLTN

>sp|KPYK_PYRAE|PYRUVATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DGRVRLYLTN 10
DGR+RL +TN
Sbjct: 136 DGRLRLKVTN 145


>sp|RL6_ARCFU|LARGE ribosomal subunit protein uL6|Archaeoglobus fulgidus (strain ATCC

Query: 1 DGRVRLYLTN 10
DG+VR+Y T+
Sbjct: 68 DGKVRVYTTS 77


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGRVRLYLTN 10
DGRV++Y T+
Sbjct: 609 DGRVQIYTTS 618


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGRVRLYLTN 10
DG V++ LTN
Sbjct: 260 DGEVKIKLTN 269


>sp|Y653_METJA|UNCHARACTERIZED protein MJ0653|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GRVRLY 7
GRVRLY
Sbjct: 171 GRVRLY 176


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 2 GRVRLYLTN 10
GRV+LYL +
Sbjct: 212 GRVKLYLLD 220


>sp|AATE2_METHJ|A-TYPE ATP synthase subunit E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DGRVRLYLT 9
DGR+R Y T
Sbjct: 163 DGRIRAYNT 171


>sp|PGP_THEKO|PHOSPHOGLYCOLATE phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 RVRLYLTN 10
R R+YLTN
Sbjct: 79 RKRVYLTN 86


>sp|GLME_HALMA|GLUTAMATE mutase epsilon subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 DGRVRLY 7
DGRVR++
Sbjct: 416 DGRVRIF 422


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 1 DGRVRL 6
DGRVRL
Sbjct: 72 DGRVRL 77


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DGRVRLYL 8
DG VR+Y+
Sbjct: 21 DGEVRMYV 28


>sp|SYK_METMJ|LYSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DGRVRLYL 8
+GR++LYL
Sbjct: 81 EGRIQLYL 88


>sp|SFSA_METS3|SUGAR fermentation stimulation protein homolog|Methanobrevibacter smithii

Query: 1 DGRVRLYLTN 10
D R+ +YL N
Sbjct: 109 DSRIDIYLAN 118


>sp|GLME_HALSA|GLUTAMATE mutase epsilon subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 DGRVRL 6
DGRVRL
Sbjct: 416 DGRVRL 421




43|SequenceR|220|211|MWPRGDGRVR

>sp|ADHS2_ARCFU|PUTATIVE 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase

Query: 1 MWPRGDG 7
M+PRGDG
Sbjct: 146 MYPRGDG 152


>sp|RTCA_PYRIL|RNA 3'-terminal phosphate cyclase|Pyrobaculum islandicum (strain DSM

Query: 2 WPRGDGRV 9
+PRG GRV
Sbjct: 158 YPRGGGRV 165


>sp|RTCA_CALMQ|RNA 3'-terminal phosphate cyclase|Caldivirga maquilingensis (strain

Query: 2 WPRGDGRVR 10
+PRG G+V+
Sbjct: 158 YPRGGGKVK 166


>sp|AROA_NATPD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 WPRGDGRV 9
W R DGR+
Sbjct: 294 WNRDDGRI 301


>sp|RTCA_STAMF|RNA 3'-terminal phosphate cyclase|Staphylothermus marinus (strain ATCC

Query: 2 WPRGDGRV 9
+PRG GRV
Sbjct: 159 YPRGGGRV 166


>sp|RTCA_HYPBU|RNA 3'-terminal phosphate cyclase|Hyperthermus butylicus (strain DSM

Query: 2 WPRGDGRV 9
+PRG GRV
Sbjct: 157 YPRGGGRV 164


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PRGDGRVR 10
P GD RVR
Sbjct: 304 PDGDSRVR 311


>sp|PANE_PYRAE|2-DEHYDROPANTOATE 2-reductase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 RGDGRVR 10
RG GRVR
Sbjct: 140 RGGGRVR 146


>sp|THI4_METMJ|THIAMINE thiazole synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 RGDGRV 9
RGDGR+
Sbjct: 133 RGDGRI 138


>sp|APGM_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PRGDG 7
PRGDG
Sbjct: 175 PRGDG 179


>sp|THTR_METTH|PUTATIVE thiosulfate sulfurtransferase|Methanothermobacter

Query: 4 RGDGRVR 10
+GDGRVR
Sbjct: 6 KGDGRVR 12


>sp|GGR_METBF|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 MWPRGDGR 8
++P+GDG+
Sbjct: 211 VFPKGDGK 218


>sp|ACTH_THEAC|ARCHAEAL actin homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PRGDGRV 9
P+GDGR+
Sbjct: 69 PQGDGRL 75


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 4 RGDGRVR 10
RG GRVR
Sbjct: 221 RGSGRVR 227


>sp|RTCA_PYRCJ|RNA 3'-terminal phosphate cyclase|Pyrobaculum calidifontis (strain DSM

Query: 2 WPRGDGRVR 10
+P+G GRV
Sbjct: 157 YPKGGGRVE 165


>sp|RL24E_THESM|LARGE ribosomal subunit protein eL24|Thermococcus sibiricus (strain DSM

Query: 1 MWPRGDGRV 9
M+ R DGRV
Sbjct: 21 MYVRNDGRV 29


>sp|RTCA_PYRAE|RNA 3'-terminal phosphate cyclase|Pyrobaculum aerophilum (strain ATCC

Query: 2 WPRGDGR 8
+PRG GR
Sbjct: 158 YPRGGGR 164


>sp|GGR2_METKA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanopyrus kandleri (strain AV19 /

Query: 1 MWPRGDGR 8
++P+G+GR
Sbjct: 204 IFPKGEGR 211


>sp|COBQ_HALMA|PROBABLE cobyric acid synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PRGDG 7
PRGDG
Sbjct: 80 PRGDG 84


>sp|ACTH_THEVO|ARCHAEAL actin homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PRGDGRV 9
P+GDGR+
Sbjct: 69 PQGDGRL 75


>sp|GGR2_METTH|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 MWPRGDGR 8
++P+G+GR
Sbjct: 207 VFPKGEGR 214


>sp|DNAJ_NATPD|CHAPERONE protein DnaJ|Natronomonas pharaonis (strain ATCC 35678

Query: 4 RGDGRVR 10
RGDG+VR
Sbjct: 215 RGDGQVR 221


>sp|RTCA_METKA|RNA 3'-terminal phosphate cyclase|Methanopyrus kandleri (strain AV19 /

Query: 2 WPRGDGRVR 10
+PRG G VR
Sbjct: 159 YPRGGGIVR 167


>sp|RL24E_PYRHO|LARGE ribosomal subunit protein eL24|Pyrococcus horikoshii (strain ATCC

Query: 1 MWPRGDGRV 9
M+ R DGRV
Sbjct: 21 MYVRNDGRV 29


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 1 MWPRGD 6
+WP GD
Sbjct: 285 VWPHGD 290


>sp|RL24E_THEGJ|LARGE ribosomal subunit protein eL24|Thermococcus gammatolerans (strain

Query: 1 MWPRGDGRV 9
M+ R DGRV
Sbjct: 21 MFVRNDGRV 29


>sp|RL24E_THEKO|LARGE ribosomal subunit protein eL24|Thermococcus kodakarensis (strain

Query: 1 MWPRGDGRV 9
M+ R DGRV
Sbjct: 21 MFVRNDGRV 29


>sp|RL24E_PYRFU|LARGE ribosomal subunit protein eL24|Pyrococcus furiosus (strain ATCC

Query: 1 MWPRGDGRV 9
M+ R DGRV
Sbjct: 21 MYVRNDGRV 29


>sp|RTCA_ARCFU|RNA 3'-terminal phosphate cyclase|Archaeoglobus fulgidus (strain ATCC

Query: 2 WPRGDGRVR 10
+P+G G VR
Sbjct: 157 YPKGGGMVR 165


>sp|Y157_METAC|UPF0251 protein MA_0157|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PRGDG 7
PRGDG
Sbjct: 96 PRGDG 100


>sp|RL24E_THEON|LARGE ribosomal subunit protein eL24|Thermococcus onnurineus (strain

Query: 1 MWPRGDGRV 9
M+ R DGRV
Sbjct: 21 MFVRNDGRV 29


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 MWPRGDGRV 9
+W GDG +
Sbjct: 287 VWKDGDGEI 295




44|SequenceR|225|216|EKINVMWPRG

>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EKINVMWPR 9
EK N WPR
Sbjct: 241 EKFNPWWPR 249


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 NVMWPRG 10
NV WPR
Sbjct: 151 NVSWPRA 157


>sp|RNP3_PYRAB|RIBONUCLEASE P protein component 3|Pyrococcus abyssi (strain GE5 /

Query: 1 EKINVMWPR 9
EK ++ WPR
Sbjct: 172 EKWHIRWPR 180


>sp|NIKR_META3|PUTATIVE nickel-responsive regulator|Methanococcus aeolicus (strain ATCC

Query: 2 KINVMWPRG 10
K+NVM P G
Sbjct: 129 KLNVMVPGG 137


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 NVMWPRG 10
NVM+P+G
Sbjct: 77 NVMFPQG 83


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 NVMWPRG 10
NVM+P+G
Sbjct: 77 NVMFPQG 83


>sp|QOX1_SULAC|QUINOL oxidase subunit 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 NVMWPR 9
NV+WP+
Sbjct: 9 NVVWPK 14


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 NVMWPRG 10
NVM+P+G
Sbjct: 77 NVMFPQG 83


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 NVMWPRG 10
NVM+P+G
Sbjct: 74 NVMFPQG 80


>sp|CISY_THEAC|CITRATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EKINVMWPR 9
E +N+ W R
Sbjct: 12 EDVNIKWTR 20


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 EKINVMW 7
EKI V+W
Sbjct: 502 EKIRVVW 508


>sp|RL4_PYRAE|LARGE ribosomal subunit protein uL4|Pyrobaculum aerophilum (strain ATCC

Query: 6 MWPRG 10
+WPRG
Sbjct: 103 LWPRG 107




45|SequenceR|230|221|FFDTDEKINV

>sp|FOLD_PYRAE|BIFUNCTIONAL protein FolD|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FFDTDEK 7
FFD DEK
Sbjct: 258 FFDVDEK 264


>sp|COFC_HALVD|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 FFDTDEK 7
FFD DE+
Sbjct: 19 FFDADER 25


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 2 FDTDEKINV 10
+D DE+IN+
Sbjct: 9 YDIDERINL 17


>sp|FOLD_PYRCJ|BIFUNCTIONAL protein FolD|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FFDTDEK 7
+FD DEK
Sbjct: 254 YFDVDEK 260


>sp|ARLY_METM6|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C6 /

Query: 1 FFDTDEKINV 10
FFDT +IN+
Sbjct: 183 FFDTYNRINI 192


>sp|ARLY_METMP|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FFDTDEKINV 10
FFDT +IN+
Sbjct: 183 FFDTYNRINI 192


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FFDTDEK 7
F+D+DEK
Sbjct: 536 FYDSDEK 542


>sp|ARLY_METM7|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C7 /

Query: 1 FFDTDEKINV 10
FFDT +IN+
Sbjct: 183 FFDTYNRINI 192


>sp|FOLD_PYRIL|BIFUNCTIONAL protein FolD|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FFDTDEK 7
+FD DEK
Sbjct: 258 YFDVDEK 264


>sp|SYFB_HALLT|PHENYLALANINE--TRNA ligase beta subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 FDTDEK 7
FDTDEK
Sbjct: 292 FDTDEK 297


>sp|ARLY_METM5|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C5 /

Query: 1 FFDTDEKINV 10
FFDT +IN+
Sbjct: 183 FFDTYNRINL 192


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 FDTDEKINV 10
FD D KI V
Sbjct: 1096 FDVDSKITV 1104


>sp|Y188_METJA|UNCHARACTERIZED protein MJ0188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FFDTDEKINV 10
+ DTD+K+ +
Sbjct: 218 YLDTDKKLGI 227


>sp|THSA_THEK8|CHAPERONIN subunit alpha|Thermococcus sp. (strain KS-8)

Query: 3 DTDEKINV 10
+TD KIN+
Sbjct: 252 ETDAKINI 259


>sp|SPCS_METJA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FFDTDEKINV 10
F DTD+ NV
Sbjct: 56 FMDTDKDPNV 65


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FDTDEKINV 10
D +EKINV
Sbjct: 971 LDINEKINV 979




46|SequenceR|235|226|QNTRQFFDTD

>sp|Y1985_PYRAR|UPF0201 protein Pars_1985|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 NTRQFFD 8
NTRQF D
Sbjct: 118 NTRQFLD 124


>sp|KPYK_AERPE|PYRUVATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 NTRQFFDT 9
+ RQFF+T
Sbjct: 101 DARQFFET 108


>sp|COFH_METM7|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C7

Query: 1 QNTRQFFD 8
+NT FFD
Sbjct: 21 ENTENFFD 28


>sp|HVO19_HALVD|PROBABLE S-adenosylmethionine-dependent methyltransferase

Query: 1 QNTRQFFDTD 10
QN R + DTD
Sbjct: 76 QNARAYTDTD 85


>sp|NNR_METHJ|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanospirillum hungatei JF-1

Query: 1 QNTRQFFDTD 10
++TR F DTD
Sbjct: 133 EHTRIFQDTD 142


>sp|DHE_HALSI|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (Halobacterium halobium)

Query: 1 QNTRQFFDTD 10
+ T ++FDTD
Sbjct: 198 EETFEYFDTD 207


>sp|DHE_HALSA|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (strain ATCC 700922

Query: 1 QNTRQFFDTD 10
+ T ++FDTD
Sbjct: 198 EETFEYFDTD 207




47|SequenceR|240|231|FYSYMQNTRQ

>sp|CYSO_AERPE|PROTEIN CysO|Aeropyrum pernix (strain ATCC 700893

Query: 2 YSYMQNTRQ 10
+SY++N R+
Sbjct: 19 FSYLENARE 27




48|SequenceR|245|236|GRTFMFYSYM

>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RTFMFYSY 9
RT++FY+Y
Sbjct: 529 RTWLFYTY 536


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 1 GRTFMFY 7
GRTF FY
Sbjct: 795 GRTFAFY 801


>sp|PHS_NATPD|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Natronomonas pharaonis

Query: 2 RTFMFYSYM 10
RTF F SY+
Sbjct: 27 RTFEFESYL 35


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RTFMFYSY 9
RT++FY++
Sbjct: 511 RTWLFYTF 518


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RTFMFYSY 9
RT++FY++
Sbjct: 537 RTWLFYTF 544


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RTFMFYSY 9
RTF +Y Y
Sbjct: 629 RTFTWYEY 636


>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 TFMFYSYM 10
+FM+YS++
Sbjct: 340 SFMYYSFI 347




49|SequenceR|250|241|QWYPGGRTFM

>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 QWYPGGR 7
+WYP GR
Sbjct: 239 RWYPKGR 245


>sp|SYT_METTH|THREONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 QWYPGGR 7
+WYP GR
Sbjct: 217 RWYPRGR 223


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 1 QWYPGGR 7
+YPGGR
Sbjct: 364 HYYPGGR 370


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 1 QWYPGGR 7
+YPGGR
Sbjct: 367 HYYPGGR 373


>sp|ARGC_METTP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 WYPGG 6
W+PGG
Sbjct: 335 WFPGG 339


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 QWYPGGR 7
+WYP G+
Sbjct: 222 RWYPKGK 228


>sp|SYT_METST|THREONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 QWYPGGR 7
+WYP G+
Sbjct: 223 RWYPKGK 229


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 QWYPGGR 7
+W+P GR
Sbjct: 218 KWFPKGR 224


>sp|SYT_METMP|THREONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QWYPGGR 7
+WYP G+
Sbjct: 222 RWYPKGK 228


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 QWYPGGR 7
+WYP G+
Sbjct: 222 RWYPKGK 228


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 QWYPGGR 7
+WYP G+
Sbjct: 222 RWYPKGK 228


>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 QWYPGGR 7
+WYP G+
Sbjct: 222 RWYPKGK 228


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QWYPGGR 7
+WYP G+
Sbjct: 220 RWYPKGK 226


>sp|SYT_META3|THREONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QWYPGGR 7
+WYP G+
Sbjct: 230 RWYPKGK 236


>sp|SYS_METST|SERINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 WYPGGRTF 9
W+PG T+
Sbjct: 338 WFPGSGTY 345


>sp|HISX_METMP|HISTIDINOL dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 WYPGGRTF 9
+ PGGR F
Sbjct: 127 YVPGGRAF 134


>sp|HISX_METJA|HISTIDINOL dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WYPGGRTF 9
+ PGGR F
Sbjct: 131 YVPGGRAF 138


>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QWYPGGR 7
++YPGG+
Sbjct: 365 RYYPGGK 371


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 3 YPGGRT 8
+PGGRT
Sbjct: 415 WPGGRT 420


>sp|BIOW_METVM|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 4 PGGRTF 9
PGGR F
Sbjct: 205 PGGRVF 210


>sp|BIOW_METIM|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus infernus (strain DSM 11812

Query: 4 PGGRTF 9
PGGR F
Sbjct: 199 PGGRVF 204


>sp|ILVD_METBU|DIHYDROXY-ACID dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 4 PGGRTFM 10
PGG FM
Sbjct: 305 PGGENFM 311


>sp|SYT_METKA|THREONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 QWYPGG 6
+WYP G
Sbjct: 220 RWYPKG 225


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 1 QWYPGGR 7
+YPGG+
Sbjct: 368 HYYPGGK 374


>sp|SPEE_PYRAB|POLYAMINE aminopropyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 QWYPGG 6
+WYP G
Sbjct: 5 EWYPRG 10


>sp|PSLS_METJA|PHOSPHOSULFOLACTATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YPGGRTF 9
YPGG F
Sbjct: 72 YPGGTLF 78


>sp|SPEE_PYRFU|POLYAMINE aminopropyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QWYPGG 6
+WYP G
Sbjct: 7 EWYPRG 12


>sp|GLKA_THELN|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus litoralis (strain ATCC

Query: 1 QWYPGGRTF 9
++YP G T+
Sbjct: 247 EYYPDGTTY 255


>sp|SPEE_THEKO|POLYAMINE aminopropyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 QWYPGG 6
+WYP G
Sbjct: 12 EWYPRG 17


>sp|SPEE_THEON|POLYAMINE aminopropyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 QWYPGG 6
+WYP G
Sbjct: 12 EWYPRG 17


>sp|SPEE_PYRHO|POLYAMINE aminopropyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QWYPGG 6
+WYP G
Sbjct: 8 EWYPRG 13


>sp|Y539_PYRAB|MEMO1 family protein PYRAB05390|Pyrococcus abyssi (strain GE5 /

Query: 1 QWYPGGRTFM 10
Q+YP G T +
Sbjct: 10 QFYPEGETLV 19


>sp|Y1098_METJA|UNCHARACTERIZED protein MJ1098|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QWYPGG 6
+WYP G
Sbjct: 135 RWYPDG 140




50|SequenceR|255|246|PIKVEQWYPG

>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IKVEQWYP 9
++VE WYP
Sbjct: 570 MEVEYWYP 577


>sp|SYS_METST|SERINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 VEQWYPG 10
+E W+PG
Sbjct: 335 LEAWFPG 341


>sp|RL6_METHJ|LARGE ribosomal subunit protein uL6|Methanospirillum hungatei JF-1

Query: 2 IKVEQWYPG 10
++ + WYPG
Sbjct: 31 LQRDMWYPG 39


>sp|SQRD_ACIAM|SULFIDE-QUINONE reductase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 PIKVEQWYP 9
P KV+++YP
Sbjct: 338 PTKVDKYYP 346


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 6 QWYPG 10
QW+PG
Sbjct: 353 QWFPG 357


>sp|Y843_ARCFU|UNCHARACTERIZED protein AF_0843|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PIKVEQW 7
P++VE+W
Sbjct: 91 PLRVEEW 97


>sp|Y2365_ARCFU|IRON-SULFUR cluster assembly SufBD family|Archaeoglobus fulgidus (strain ATCC

Query: 1 PIKVEQWYP 9
P+K+ Q YP
Sbjct: 201 PVKLVQTYP 209


>sp|COBQ_PYRFU|PROBABLE cobyric acid synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PIKVEQW 7
PIK+ +W
Sbjct: 449 PIKIREW 455


>sp|Y1098_METJA|UNCHARACTERIZED protein MJ1098|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EQWYP 9
E+WYP
Sbjct: 134 ERWYP 138


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 PIKVEQWYPG 10
P KVE+ PG
Sbjct: 312 PTKVEEATPG 321


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PIKVEQWY 8
P ++EQWY
Sbjct: 5 PKEIEQWY 12


>sp|HSPS_METJA|SMALL heat shock protein HSP16.5|Methanocaldococcus jannaschii (strain

Query: 2 IKVEQWYPG 10
IKV W PG
Sbjct: 54 IKVIAWLPG 62


>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 VEQWYPG 10
+E WYP
Sbjct: 351 IEAWYPA 357


>sp|SERK_DESM0|ATP-DEPENDENT L-serine kinase|Desulfurococcus mucosus (strain ATCC 35584

Query: 2 IKVEQWYPG 10
+K++ W PG
Sbjct: 103 VKLKTWLPG 111


>sp|Y752_METJA|UNCHARACTERIZED protein MJ0752|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EQWYP 9
E+WYP
Sbjct: 55 EKWYP 59


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PIKVEQW 7
P++VE W
Sbjct: 137 PVQVEDW 143


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 IKVEQWYPG 10
I+ QWY G
Sbjct: 6 IRSSQWYDG 14


>sp|SERK_STAMF|ATP-DEPENDENT L-serine kinase|Staphylothermus marinus (strain ATCC 43588

Query: 2 IKVEQWYPG 10
+K++ WYP
Sbjct: 102 VKLKTWYPA 110


>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PIKVEQWYPG 10
PIKV +Y G
Sbjct: 217 PIKVNFYYSG 226


>sp|RL5_NANEQ|LARGE ribosomal subunit protein uL5|Nanoarchaeum equitans (strain

Query: 2 IKVEQWY 8
++VEQW+
Sbjct: 48 VRVEQWH 54


>sp|CISY_PYRFU|CITRATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PIKVEQWY 8
P KVE+W+
Sbjct: 241 PEKVEEWF 248


>sp|SYS_PYRIL|SERINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 VEQWYPG 10
+E WYP
Sbjct: 352 IEVWYPA 358


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PIKVEQWYP 9
P+++E+ YP
Sbjct: 418 PVEMEEVYP 426


>sp|SERK_DESA1|ATP-DEPENDENT L-serine kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 IKVEQWYPG 10
+K++ W PG
Sbjct: 103 VKLKTWLPG 111


>sp|RQCH_METJA|ARCHAEAL Rqc2 homolog aRqcH|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PIKVEQW 7
P++VE+W
Sbjct: 139 PLRVERW 145


>sp|SERK_THEKO|ADP-DEPENDENT L-serine kinase SerK|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IKVEQWYPG 10
+KV WYP
Sbjct: 97 VKVYTWYPA 105


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PIKVEQW 7
P++V QW
Sbjct: 136 PLRVNQW 142


>sp|SYS_PYRAE|SERINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 VEQWYP 9
+E WYP
Sbjct: 353 IEVWYP 358




51|SequenceR|260|251|FFKSFPIKVE

>sp|IF2P_SULAC|PROBABLE translation initiation factor IF-2|Sulfolobus acidocaldarius

Query: 3 KSFPIKVE 10
KSFPIK+E
Sbjct: 67 KSFPIKLE 74


>sp|PURA_THEON|ADENYLOSUCCINATE synthetase|Thermococcus onnurineus (strain NA1)

Query: 2 FKSFPIKV 9
FKSFP +V
Sbjct: 221 FKSFPTRV 228


>sp|PURA_THEKO|ADENYLOSUCCINATE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FKSFPIKV 9
FKSFP +V
Sbjct: 221 FKSFPTRV 228


>sp|PURA_THEGJ|ADENYLOSUCCINATE synthetase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 FKSFPIKV 9
FKSFP +V
Sbjct: 221 FKSFPTRV 228


>sp|PURA_PYRSS|ADENYLOSUCCINATE synthetase|Pyrococcus sp. (strain ST700)

Query: 2 FKSFPIKV 9
FKSFP +V
Sbjct: 221 FKSFPTRV 228


>sp|PURA_PYRHO|ADENYLOSUCCINATE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FKSFPIKV 9
FKSFP +V
Sbjct: 221 FKSFPTRV 228


>sp|PURA_PYRFU|ADENYLOSUCCINATE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FKSFPIKV 9
FKSFP +V
Sbjct: 221 FKSFPTRV 228


>sp|PURA_PYRAB|ADENYLOSUCCINATE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 2 FKSFPIKV 9
FKSFP +V
Sbjct: 221 FKSFPTRV 228


>sp|GCSPA_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 1 FFKSFPIKVE 10
FFK FPI +
Sbjct: 396 FFKEFPINFD 405


>sp|PURA_THESM|ADENYLOSUCCINATE synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 2 FKSFPIKV 9
FKSFP +V
Sbjct: 221 FKSFPTRV 228


>sp|IF2P_SULTO|PROBABLE translation initiation factor IF-2|Sulfurisphaera tokodaii

Query: 3 KSFPIKVE 10
K+FPIK+E
Sbjct: 68 KTFPIKLE 75


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 KSFPIKVE 10
+++PIKVE
Sbjct: 487 RTYPIKVE 494


>sp|PURA_METJA|ADENYLOSUCCINATE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FKSFPIKV 9
FK+FP +V
Sbjct: 227 FKTFPTRV 234


>sp|Y288_METJA|UNCHARACTERIZED protein MJ0288|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KSFPIKVE 10
SFP+KVE
Sbjct: 59 NSFPVKVE 66


>sp|Y816_METJA|UNCHARACTERIZED protein MJ0816|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FFKSFPIKVE 10
FF+ FPIK++
Sbjct: 236 FFELFPIKIK 245


>sp|SYE_METTH|GLUTAMATE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 FFKSFPIKVE 10
FF + P+K+E
Sbjct: 405 FFAADPVKLE 414


>sp|FTR_METBU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FFKSFPIKV 9
F ++FPIK+
Sbjct: 12 FAEAFPIKI 20


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FFKSFPIKV 9
F K +P+KV
Sbjct: 1026 FIKVYPVKV 1034


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 FFKSFPIKV 9
F K +P+KV
Sbjct: 1026 FIKVYPVKV 1034


>sp|ASSY_SACS2|ARGININOSUCCINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 KSFPIKVE 10
K PIKVE
Sbjct: 159 KGIPIKVE 166




52|SequenceR|265|256|GRNSFFFKSF

>sp|PMDHL_THEKO|PHOSPHOMEVALONATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 GRNSFFFKSF 10
G+++F+F+SF
Sbjct: 360 GKSAFYFRSF 369


>sp|AROE_THEAC|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC

Query: 2 RNSFFFKSF 10
+NSFF K+F
Sbjct: 51 KNSFFLKAF 59




53|SequenceR|270|261|VDRIRGRNSF

>sp|Y1598_METJA|UPF0284 protein MJ1598|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDRIRGRN 8
+D+I+GRN
Sbjct: 12 LDKIKGRN 19


>sp|TRPE_METJA|ANTHRANILATE synthase component 1|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DRIRGRNSF 10
++IRG N+F
Sbjct: 17 EQIRGENTF 25


>sp|TRPC_THEKO|INDOLE-3-GLYCEROL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DRIRGRNSF 10
D ++GRN F
Sbjct: 30 DLLKGRNPF 38


>sp|SMC_METJA|CHROMOSOME partition protein Smc|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VDRIRGRNSF 10
+DRI GR ++
Sbjct: 582 LDRIEGREAY 591


>sp|PHR_METTH|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VDRIRG 6
VDRIRG
Sbjct: 436 VDRIRG 441




54|SequenceR|275|266|PLEHQVDRIR

>sp|HTPX_METKA|PROTEASE HtpX homolog|Methanopyrus kandleri (strain AV19 /

Query: 1 PLEHQVDRIR 10
P+E +V+R+R
Sbjct: 300 PVEKRVERLR 309


>sp|EF2_METTP|ELONGATION factor 2|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PLEHQVDRIR 10
PLE Q +RIR
Sbjct: 259 PLEAQKNRIR 268


>sp|AATC_HALSA|A-TYPE ATP synthase subunit C|Halobacterium salinarum (strain ATCC 700922

Query: 1 PLEHQVDR 8
PLE+ VDR
Sbjct: 176 PLENAVDR 183


>sp|AATC_HALS3|A-TYPE ATP synthase subunit C|Halobacterium salinarum (strain ATCC 29341

Query: 1 PLEHQVDR 8
PLE+ VDR
Sbjct: 176 PLENAVDR 183


>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PLEHQVDRIR 10
PL+H V +R
Sbjct: 192 PLQHSVQELR 201


>sp|PYRG_SULTO|CTP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PLEHQVDRIR 10
PL+H V +R
Sbjct: 191 PLQHSVQELR 200


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PLEHQVDRIR 10
PL+H V +R
Sbjct: 190 PLQHSVQELR 199


>sp|G1PDH_NATPD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LEHQVDRI 9
+ HQ+DRI
Sbjct: 254 ISHQLDRI 261


>sp|AATC_HALVD|A-TYPE ATP synthase subunit C|Haloferax volcanii (strain ATCC 29605

Query: 1 PLEHQVDR 8
PLE+ VDR
Sbjct: 176 PLENAVDR 183


>sp|AATC_HALWD|A-TYPE ATP synthase subunit C|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PLEHQVDR 8
PLE+ VDR
Sbjct: 177 PLENAVDR 184


>sp|AATC_HALLT|A-TYPE ATP synthase subunit C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PLEHQVDR 8
PLE+ VDR
Sbjct: 176 PLENAVDR 183


>sp|DHYS2_METMA|PROBABLE deoxyhypusine synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LEHQVDRI 9
EH VDRI
Sbjct: 117 FEHGVDRI 124


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 1 PLEHQVDRI 9
PL++++DR+
Sbjct: 631 PLKNEIDRL 639


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 PLEHQVDRIR 10
P+E Q DR++
Sbjct: 259 PIEAQKDRVK 268


>sp|CS3HE_METJA|CRISPR-ASSOCIATED helicase Cas3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LEHQVDRIR 10
+E QV+RIR
Sbjct: 78 VEKQVERIR 86


>sp|PIMT_KORCO|PROTEIN-L-ISOASPARTATE O-methyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 PLEHQVDRI 9
PL +VDRI
Sbjct: 146 PLRRKVDRI 154


>sp|SPH1_HALSA|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 700922

Query: 2 LEHQVDR 8
LE+QVDR
Sbjct: 230 LENQVDR 236


>sp|SPH1_HALS3|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 29341

Query: 2 LEHQVDR 8
LE+QVDR
Sbjct: 230 LENQVDR 236


>sp|SPH1_HALSI|SMC-LIKE protein Sph1|Halobacterium salinarum (Halobacterium halobium)

Query: 2 LEHQVDR 8
LE+QVDR
Sbjct: 230 LENQVDR 236


>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 3 EHQVDRIR 10
+H VDR+R
Sbjct: 353 KHDVDRMR 360


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 PLEHQVDRI 9
P+EH+V+ I
Sbjct: 92 PIEHKVEGI 100




55|SequenceR|280|271|SIKDLPLEHQ

>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 2 IKDLPLEHQ 10
+KDLPL +Q
Sbjct: 738 VKDLPLNYQ 746


>sp|HEM3_IGNH4|PROBABLE porphobilinogen deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 SIKDLPLE 8
S+KDLP E
Sbjct: 80 SLKDLPTE 87


>sp|Y819_METVS|UPF0212 protein Mevan_0819|Methanococcus vannielii (strain ATCC 35089

Query: 1 SIKDLPLE 8
++KD+PLE
Sbjct: 99 ALKDIPLE 106


>sp|Y753_METM7|UPF0212 protein MmarC7_0753|Methanococcus maripaludis (strain C7 /

Query: 1 SIKDLPLE 8
++KD+PLE
Sbjct: 99 ALKDIPLE 106


>sp|Y1509_METMP|UPF0212 protein MMP1509|Methanococcus maripaludis (strain DSM 14266

Query: 1 SIKDLPLE 8
++KD+PLE
Sbjct: 99 ALKDIPLE 106


>sp|Y1509_METMI|UPF0212 protein in gatA 3'region|Methanococcus maripaludis (Methanococcus

Query: 1 SIKDLPLE 8
++KD+PLE
Sbjct: 99 ALKDIPLE 106


>sp|Y1165_METM6|UPF0212 protein MmarC6_1165|Methanococcus maripaludis (strain C6 /

Query: 1 SIKDLPLE 8
++KD+PLE
Sbjct: 99 ALKDIPLE 106


>sp|Y068_METM5|UPF0212 protein MmarC5_0068|Methanococcus maripaludis (strain C5 /

Query: 1 SIKDLPLE 8
++KD+PLE
Sbjct: 99 ALKDIPLE 106


>sp|HEM3_PYRCJ|PROBABLE porphobilinogen deaminase|Pyrobaculum calidifontis (strain DSM

Query: 1 SIKDLPLE 8
S+KDLP E
Sbjct: 78 SLKDLPSE 85


>sp|HEM3_PYRAE|PROBABLE porphobilinogen deaminase|Pyrobaculum aerophilum (strain ATCC

Query: 1 SIKDLPLE 8
S+KDLP E
Sbjct: 78 SLKDLPSE 85


>sp|Y273_META3|UPF0212 protein Maeo_0273|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SIKDLPLE 8
++KD+PLE
Sbjct: 99 TLKDIPLE 106


>sp|HEM3_PYRAR|PROBABLE porphobilinogen deaminase|Pyrobaculum arsenaticum (strain DSM

Query: 1 SIKDLPLE 8
S+KDLP E
Sbjct: 78 SLKDLPSE 85


>sp|HEM3_PYRIL|PROBABLE porphobilinogen deaminase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SIKDLPLE 8
S+KDLP E
Sbjct: 78 SLKDLPSE 85


>sp|SYS_HALSA|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 DLPLEHQ 10
DLP++HQ
Sbjct: 259 DLPVKHQ 265


>sp|SYS_HALS3|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 DLPLEHQ 10
DLP++HQ
Sbjct: 259 DLPVKHQ 265


>sp|SERB_METJA|PHOSPHOSERINE phosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IKDLPLE 8
+KDLP+E
Sbjct: 60 LKDLPIE 66


>sp|SYS_HALMA|SERINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 DLPLEHQ 10
DLP++HQ
Sbjct: 260 DLPVKHQ 266


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 2 IKDLPL 7
IKDLPL
Sbjct: 13 IKDLPL 18




56|SequenceR|285|276|TFGISSIKDL

>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 1 TFGISSIKDL 10
+FG S++DL
Sbjct: 584 SFGFKSVEDL 593


>sp|HIS4_ARCFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Archaeoglobus fulgidus (strain

Query: 3 GISSIKDL 10
GISSI+D+
Sbjct: 196 GISSIEDI 203


>sp|YBP3_ACIAM|UNCHARACTERIZED 17.7 kDa protein in|Acidianus ambivalens (Desulfurolobus

Query: 2 FGISSIKDL 10
+GI SI+DL
Sbjct: 110 YGIVSIRDL 118


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 FGISSIKD 9
FG+ S+KD
Sbjct: 326 FGLDSVKD 333


>sp|HIS4_METKA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanopyrus kandleri (strain

Query: 3 GISSIKDL 10
GI+SIKD+
Sbjct: 201 GIASIKDV 208


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FGISSIKDL 10
FG+ IKDL
Sbjct: 253 FGLIKIKDL 261


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 2 FGISSIKDL 10
FG+ IKDL
Sbjct: 253 FGLIKIKDL 261


>sp|TRPA_SULAC|TRYPTOPHAN synthase alpha chain|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FGISSIKDL 10
FG++SI+D+
Sbjct: 194 FGLNSIEDI 202


>sp|HIS4_METBF|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosarcina barkeri (strain

Query: 3 GISSIKDL 10
G+SS++DL
Sbjct: 204 GVSSLQDL 211




57|SequenceR|290|281|VKDALTFGIS

>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VKDALTFGIS 10
+KD + FGIS
Sbjct: 430 IKDYMNFGIS 439


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VKDALTFGIS 10
+ + LTFGIS
Sbjct: 506 ISNGLTFGIS 515


>sp|PRIS_ARCFU|DNA primase small subunit PriS|Archaeoglobus fulgidus (strain ATCC

Query: 1 VKDALTFG 8
+KDAL FG
Sbjct: 280 LKDALAFG 287


>sp|THIO_ARCFU|PROBABLE Thioredoxin|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VKDALTFGI 9
+K+AL FGI
Sbjct: 44 LKEALKFGI 52


>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain

Query: 3 DALTFGIS 10
D +TFG+S
Sbjct: 15 DEMTFGVS 22


>sp|RUVB_METHJ|HOLLIDAY junction branch migration complex|Methanospirillum hungatei JF-1

Query: 1 VKDALTFGIS 10
+KDALT I+
Sbjct: 34 IKDALTVAIT 43


>sp|COFG_METPE|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 KDALTFGI 9
K+AL FGI
Sbjct: 94 KEALRFGI 101


>sp|RS2_NATPD|SMALL ribosomal subunit protein uS2|Natronomonas pharaonis (strain ATCC

Query: 1 VKDALTFGI 9
VK+A+T GI
Sbjct: 210 VKEAITVGI 218


>sp|RIFK_THEKO|RIBOFLAVIN kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VKDALTFG 8
VKD TFG
Sbjct: 149 VKDGRTFG 156


>sp|RS2_HALSA|SMALL ribosomal subunit protein uS2|Halobacterium salinarum (strain ATCC

Query: 1 VKDALTFGI 9
VK+A+T GI
Sbjct: 182 VKEAITVGI 190


>sp|RS2_HALS3|SMALL ribosomal subunit protein uS2|Halobacterium salinarum (strain ATCC

Query: 1 VKDALTFGI 9
VK+A+T GI
Sbjct: 182 VKEAITVGI 190


>sp|RS2_HALMA|SMALL ribosomal subunit protein uS2|Haloarcula marismortui (strain ATCC

Query: 1 VKDALTFGI 9
VK+A+T GI
Sbjct: 200 VKEAITVGI 208


>sp|RS2_HALWD|SMALL ribosomal subunit protein uS2|Haloquadratum walsbyi (strain DSM

Query: 1 VKDALTFGI 9
VK+A+T GI
Sbjct: 212 VKEAITVGI 220


>sp|TAL_PICTO|PROBABLE transaldolase|Picrophilus torridus (strain ATCC 700027

Query: 1 VKDALTFGI 9
+KDA+ +G+
Sbjct: 13 IKDAIEYGL 21


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 2 KDALTFGI 9
+DALT GI
Sbjct: 51 EDALTIGI 58




58|SequenceR|295|286|FFPGDVKDAL

>sp|KITH_PYRAE|THYMIDINE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FFPGDVKDAL 10
FFP D+ DAL
Sbjct: 87 FFPVDLADAL 96


>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 FPGDVKDAL 10
F GDV+DA+
Sbjct: 409 FAGDVRDAV 417


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PGDVKDAL 10
PG++KDA+
Sbjct: 166 PGEIKDAI 173


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PGDVKDAL 10
PG++KDA+
Sbjct: 168 PGEIKDAV 175


>sp|Y1261_METTH|UPF0104 membrane protein MTH_1261|Methanothermobacter thermautotrophicus

Query: 3 PGDVKDAL 10
PG+++DAL
Sbjct: 25 PGEIEDAL 32


>sp|THS_METKA|THERMOSOME subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 FPGDVKDAL 10
+ GDVKD L
Sbjct: 484 YDGDVKDML 492


>sp|RADB_THEGJ|DNA repair and recombination protein|Thermococcus gammatolerans

Query: 1 FFPGDVKD 8
F PGD+++
Sbjct: 83 FTPGDIRE 90


>sp|Y1526_METJA|UPF0280 protein MJ1526|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FFPGDVKD 8
+FP DV+D
Sbjct: 52 YFPVDVED 59


>sp|GLYA_META3|SERINE hydroxymethyltransferase|Methanococcus aeolicus (strain ATCC

Query: 2 FPGDVKDAL 10
FP VKDA+
Sbjct: 175 FPHPVKDAV 183


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 1 FFPGDVKDAL 10
F P DV+D +
Sbjct: 363 FIPEDVRDKI 372


>sp|HDRB_METKA|COB--COM heterodisulfide reductase subunit B|Methanopyrus kandleri (strain

Query: 2 FPGDVKD 8
FPG V+D
Sbjct: 172 FPGSVED 178


>sp|AATE_HALMA|A-TYPE ATP synthase subunit E|Haloarcula marismortui (strain ATCC 43049

Query: 4 GDVKDAL 10
GDV+DAL
Sbjct: 87 GDVEDAL 93


>sp|TRUD_SULTO|PROBABLE tRNA pseudouridine synthase D|Sulfurisphaera tokodaii (strain DSM

Query: 1 FFPGDVKDAL 10
+ GD+K+AL
Sbjct: 206 YMKGDLKEAL 215


>sp|RL7A_METKA|LARGE ribosomal subunit protein eL8|Methanopyrus kandleri (strain AV19 /

Query: 3 PGDVKD 8
PGD KD
Sbjct: 104 PGDAKD 109


>sp|PDXT_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum aerophilum (strain

Query: 3 PGDVKD 8
PGD+KD
Sbjct: 38 PGDLKD 43


>sp|NADE_PYRAE|NH(3)-DEPENDENT NAD(+) synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PGDVKDAL 10
P D+KDAL
Sbjct: 73 PEDLKDAL 80




59|SequenceR|300|291|FDIELFFPGD

>sp|SYS_HALWD|SERINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 FDIELFFPGD 10
+DIE++ PGD
Sbjct: 346 YDIEVWAPGD 355


>sp|SYS_HALMA|SERINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 FDIELFFPGD 10
+DIE++ PGD
Sbjct: 346 YDIEVWAPGD 355


>sp|SYS_HALSA|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 FDIELFFPGD 10
+DIE++ PGD
Sbjct: 345 YDIEVWAPGD 354


>sp|SYS_HALS3|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 FDIELFFPGD 10
+DIE++ PGD
Sbjct: 345 YDIEVWAPGD 354


>sp|SYS_METST|SERINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 FDIELFFPG 9
+D+E +FPG
Sbjct: 333 YDLEAWFPG 341


>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 1 FDIELFFPGD 10
F +ELF GD
Sbjct: 263 FGVELFVKGD 272


>sp|HIS8_METMA|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FDIELFFPG 9
FDIE + PG
Sbjct: 16 FDIEEYVPG 24


>sp|Y1281_ARCFU|UNCHARACTERIZED protein AF_1281|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DIELFFP 8
D+ELF+P
Sbjct: 13 DLELFYP 19


>sp|SYE_THEKO|GLUTAMATE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DIELFFPGD 10
D+ELF PG+
Sbjct: 462 DMELFKPGN 470


>sp|CCA_PYRFU|CCA-ADDING enzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IELFFPGD 10
+E FFPG+
Sbjct: 274 LEFFFPGE 281


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FDIELFFPG 9
+DIE+++P
Sbjct: 351 YDIEVWYPA 359


>sp|Y1033_METBU|UPF0179 protein Mbur_1033|Methanococcoides burtonii (strain DSM 6242

Query: 3 IELFFPGD 10
+E FF GD
Sbjct: 20 VEFFFDGD 27


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 FDIELFFPG 9
+DIE + PG
Sbjct: 356 YDIEAWMPG 364


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FDIELFFPG 9
+DIE + PG
Sbjct: 356 YDIEAWMPG 364


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 1 FDIELFFPGD 10
F +E+F GD
Sbjct: 273 FGVEMFVKGD 282


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 1 FDIELFFPGD 10
F +E+F GD
Sbjct: 273 FGVEMFVKGD 282


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 1 FDIELFFPGD 10
F +E+F GD
Sbjct: 273 FGVEMFVKGD 282


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 1 FDIELFFPGD 10
F +E+F GD
Sbjct: 273 FGVEMFVKGD 282


>sp|SYS_PYRAE|SERINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FDIELFFP 8
+DIE+++P
Sbjct: 351 YDIEVWYP 358


>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FDIELFFPG 9
+DIE + PG
Sbjct: 356 YDIEAWMPG 364


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 DIELFFPG 9
D+ELF PG
Sbjct: 462 DMELFKPG 469


>sp|SYS_THEVO|SERINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FDIELFFPG 9
+DIE +FP
Sbjct: 354 YDIEAWFPA 362


>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 2 DIELFFPG 9
DIE + PG
Sbjct: 410 DIEYYIPG 417


>sp|SYS_THEAC|SERINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FDIELFFPG 9
+DIE +FP
Sbjct: 354 YDIEAWFPA 362


>sp|AROD_METTP|3-DEHYDROQUINATE dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 DIELFFPG 9
DIEL PG
Sbjct: 100 DIELMAPG 107


>sp|CMR1A_PYRFU|CRISPR system Cmr subunit Cmr1-1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DIELFFPG 9
D+E+F PG
Sbjct: 221 DVEVFGPG 228


>sp|SYS_PYRIL|SERINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FDIELFFPG 9
+DIE+++P
Sbjct: 350 YDIEVWYPA 358


>sp|FTHS_THEAC|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 IELFFPGD 10
I LFF GD
Sbjct: 108 INLFFTGD 115


>sp|SYS_PICTO|SERINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 FDIELFFPG 9
+DIE +FP
Sbjct: 353 YDIEAWFPA 361


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 1 FDIELFF 7
+D+E+FF
Sbjct: 290 YDVEMFF 296


>sp|CCA_PYRAB|CCA-ADDING enzyme|Pyrococcus abyssi (strain GE5 /

Query: 4 ELFFPGD 10
ELFFP D
Sbjct: 274 ELFFPRD 280




60|SequenceR|305|296|TFVGIFDIEL

>sp|PURA_METS3|ADENYLOSUCCINATE synthetase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 VGIFDIEL 10
VG+FD+EL
Sbjct: 260 VGLFDMEL 267


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FVGIFDIE 9
F+G+FD++
Sbjct: 603 FLGLFDLD 610


>sp|PURA_METTH|ADENYLOSUCCINATE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 VGIFDIEL 10
+G+FD+E+
Sbjct: 260 IGLFDMEM 267


>sp|RRP4_SACS2|EXOSOME complex component Rrp4|Saccharolobus solfataricus (strain ATCC

Query: 1 TFVGIFDIE 9
T VG+FD++
Sbjct: 46 TVVGLFDVK 54


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TFVGIFDIEL 10
+ GIFDI++
Sbjct: 339 SMTGIFDIDI 348


>sp|PURA_METVS|ADENYLOSUCCINATE synthetase|Methanococcus vannielii (strain ATCC 35089

Query: 3 VGIFDIEL 10
VG FD EL
Sbjct: 260 VGYFDFEL 267


>sp|Y1185_METJA|UNCHARACTERIZED protein MJ1185|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TFVGIFDI 8
T +GIFD+
Sbjct: 329 TLLGIFDL 336


>sp|SYFB_PYRAB|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 VGIFDIE 9
+GIFD E
Sbjct: 142 IGIFDFE 148


>sp|Y3504_METJA|UNCHARACTERIZED protein MJECL04|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GIFDIE 9
GIFDIE
Sbjct: 312 GIFDIE 317




61|SequenceR|310|301|THAPDTFVGI

>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 HAPDTFVG 9
H P++FVG
Sbjct: 303 HLPESFVG 310


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 HAPDTFVG 9
H PDT+ G
Sbjct: 310 HLPDTYAG 317


>sp|DTDA_NATPD|D-AMINOACYL-TRNA deacylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 THAPDTF-VGI 10
THAPD + VGI
Sbjct: 125 THAPDDYDVGI 135


>sp|HISX_SACS2|HISTIDINOL dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 HAPDTFV 8
H PDT++
Sbjct: 247 HGPDTYI 253


>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 THAPDTFVGI 10
+H P +VGI
Sbjct: 91 SHNPSEYVGI 100


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 THAPDTFVGI 10
+H P +VGI
Sbjct: 91 SHNPSEYVGI 100


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 THAPDTFVGI 10
+H P +VGI
Sbjct: 91 SHNPSEYVGI 100


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 THAPDTFVGI 10
+HAP +VG+
Sbjct: 385 SHAPYDYVGL 394


>sp|DTDA_METTP|D-AMINOACYL-TRNA deacylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 HAPDTF 7
HAP TF
Sbjct: 117 HAPSTF 122


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 HAPDTFVGI 10
H PD F I
Sbjct: 480 HVPDNFYSI 488


>sp|GFCR_METMJ|TRANSCRIPTIONAL regulator GfcR|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 PDTFVGI 10
PDT VGI
Sbjct: 92 PDTVVGI 98


>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 2 HAPDTFVGI 10
H D FVGI
Sbjct: 108 HGFDAFVGI 116


>sp|BTUFA_HALSA|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 700922

Query: 1 THAPDTFVG 9
T P+TF+G
Sbjct: 210 TAGPNTFIG 218


>sp|BTUFA_HALS3|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 29341

Query: 1 THAPDTFVG 9
T P+TF+G
Sbjct: 210 TAGPNTFIG 218


>sp|GATD_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanothermobacter thermautotrophicus

Query: 2 HAPDTFVGI 10
H PDT + +
Sbjct: 338 HCPDTLIPV 346


>sp|PRIS_NATPD|DNA primase small subunit PriS|Natronomonas pharaonis (strain ATCC

Query: 4 PDTFVG 9
P+TFVG
Sbjct: 340 PETFVG 345


>sp|CHEB_NATPD|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Natronomonas pharaonis

Query: 2 HAPDTFVG 9
H PD F G
Sbjct: 200 HMPDGFTG 207




62|SequenceR|315|306|YAFEETHAPD

>sp|Y1362_METJA|UNCHARACTERIZED protein MJ1362|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YAFEETHAPD 10
+ F+ET APD
Sbjct: 52 FLFKETKAPD 61


>sp|RLME_HALSA|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum (strain

Query: 1 YAFEETHAPD 10
+AF TH+PD
Sbjct: 170 FAFVATHSPD 179


>sp|RLME_HALS3|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum (strain

Query: 1 YAFEETHAPD 10
+AF TH+PD
Sbjct: 170 FAFVATHSPD 179


>sp|AATF_THEKO|A-TYPE ATP synthase subunit F|Thermococcus kodakarensis (strain ATCC

Query: 1 YAFEET 6
YAFEET
Sbjct: 24 YAFEET 29


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 YAFEETHAPD 10
Y+FEET D
Sbjct: 846 YSFEETQLKD 855


>sp|DTDA_NATPD|D-AMINOACYL-TRNA deacylase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 ETHAPD 10
ETHAPD
Sbjct: 124 ETHAPD 129


>sp|XERA_PYRAB|TYROSINE recombinase XerA|Pyrococcus abyssi (strain GE5 /

Query: 3 FEETHAP 9
FEE H+P
Sbjct: 41 FEEGHSP 47


>sp|Y762_ARCFU|UNCHARACTERIZED protein AF_0762|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YAFEETHAPD 10
Y F +T PD
Sbjct: 124 YGFNKTPTPD 133


>sp|Y1298_METVS|UPF0248 protein Mevan_1298|Methanococcus vannielii (strain ATCC 35089

Query: 3 FEETHAP 9
F ETH P
Sbjct: 50 FNETHIP 56


>sp|Y1289_METM7|UPF0248 protein MmarC7_1289|Methanococcus maripaludis (strain C7 /

Query: 3 FEETHAP 9
F+ETH P
Sbjct: 50 FDETHVP 56


>sp|Y1387_METM5|UPF0248 protein MmarC5_1387|Methanococcus maripaludis (strain C5 /

Query: 3 FEETHAP 9
F+ETH P
Sbjct: 50 FDETHIP 56


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 YAFEETH 7
YAF+E H
Sbjct: 1576 YAFDENH 1582


>sp|Y667_METM6|UPF0248 protein MmarC6_0667|Methanococcus maripaludis (strain C6 /

Query: 3 FEETHAP 9
F+ETH P
Sbjct: 50 FDETHIP 56


>sp|GLYA_METTM|SERINE hydroxymethyltransferase|Methanothermobacter marburgensis (strain

Query: 1 YAFEETHA 8
YAFEE+ A
Sbjct: 409 YAFEESGA 416




63|SequenceR|320|311|EPSNEYAFEE

>sp|Y1412_META3|UPF0210 protein Maeo_1412|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PSNEYAFEE 10
P NEY+ EE
Sbjct: 433 PVNEYSSEE 441


>sp|RL3_STAMF|LARGE ribosomal subunit protein uL3|Staphylothermus marinus (strain ATCC

Query: 1 EPSNEYAFE 9
EP +EY F+
Sbjct: 171 EPHSEYGFK 179


>sp|ASSTI_METAC|L-ASPARTATE semialdehyde sulfurtransferase iron-sulfur subunit|Methanosarcina

Query: 2 PSNEYAFEE 10
P N Y+F+E
Sbjct: 92 PMNVYSFDE 100


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 NEYAFEE 10
NEY FEE
Sbjct: 265 NEYIFEE 271


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EPSNEYAF 8
EP +EY F
Sbjct: 560 EPEDEYEF 567




64|SequenceR|327|316|KFLRPNLEPSNE

>sp|APGM2_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanothermobacter thermautotrophicus

Query: 3 LRPNLEPSNE 12
LRP++EP +E
Sbjct: 223 LRPSMEPFSE 232


>sp|SYS_PYRIL|SERINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KFLRPNLEP 9
K LRP LEP
Sbjct: 425 KVLRPYLEP 433


>sp|MTAD_THEKO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FLRPNLEPSNE 12
F RP+L P N+
Sbjct: 364 FNRPHLRPIND 374


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 KFLRPN 6
KFLRPN
Sbjct: 536 KFLRPN 541


>sp|IF5A_METTP|TRANSLATION initiation factor 5A|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 LRPNLEPSNE 12
++P LEP E
Sbjct: 103 MKPKLEPGKE 112


>sp|SAHH_SULTO|ADENOSYLHOMOCYSTEINASE tokodaii (strain DSM 16993

Query: 1 KFLRPNLE 8
+ +RPNLE
Sbjct: 310 RLIRPNLE 317


>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 KFLRPNLEP 9
K LRP LEP
Sbjct: 424 KALRPYLEP 432


>sp|APGM_META3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus aeolicus (strain ATCC

Query: 5 PNLEPSNE 12
PN++P NE
Sbjct: 227 PNIQPFNE 234


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KFLRPNLEP 9
K LRP LEP
Sbjct: 426 KALRPYLEP 434


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KFLRPNLEPS 10
+++ PN EP+
Sbjct: 622 RYIHPNYEPA 631


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 PNLEPSN 11
P+LEP N
Sbjct: 245 PSLEPGN 251


>sp|METK_METST|S-ADENOSYLMETHIONINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 FLRPNLEPSN 11
F RPN PS+
Sbjct: 150 FQRPNTIPSS 159


>sp|RL18_CALMQ|LARGE ribosomal subunit protein uL18|Caldivirga maquilingensis (strain

Query: 1 KFLRPNLEPSN 11
K+L LEP N
Sbjct: 170 KYLARGLEPEN 180


>sp|ARGJ_METM6|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 FLRPNLEPSNE 12
F NLE SNE
Sbjct: 132 FKNMNLENSNE 142


>sp|RNH2_THEAC|RIBONUCLEASE HII|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KFLRPNLEPS 10
K+L+ N +PS
Sbjct: 179 KYLKENQDPS 188




THE END