CDK5_HUMAN Blast Output
Archaea
1|Sequence|1|10|MQKYEKLEKI

>sp|TRPD_THEVO|ANTHRANILATE phosphoribosyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 QKYEKLEKI 10
Q YEKLE I
Sbjct: 312 QAYEKLEAI 320


>sp|GGR_THEAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MQKYEKLEK 9
MQKYEKL K
Sbjct: 324 MQKYEKLIK 332


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MQKYEKLEK 9
MQKY +LEK
Sbjct: 409 MQKYSELEK 417


>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 MQKYEKLEKI 10
+ KYEKL KI
Sbjct: 112 VSKYEKLSKI 121


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 2 QKYEKLEKI 10
+KYEK+ +I
Sbjct: 368 EKYEKVSQI 376


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 1 MQKYEKLEKI 10
++KYE LEK+
Sbjct: 213 LKKYENLEKL 222


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 3 KYEKLEKI 10
+YE+LEK+
Sbjct: 94 RYERLEKL 101


>sp|Y1724_PYRFU|UPF0292 protein PF1724|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QKYEKLEKI 10
+ YEK EKI
Sbjct: 4 ENYEKFEKI 12


>sp|HELS_THEVO|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MQKYEKLEKI 10
M+KYE+L ++
Sbjct: 79 MEKYEELSRL 88


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 QKYEKLEKI 10
+KYE+L K+
Sbjct: 778 EKYERLAKV 786




2|Sequence|6|15|KLEKIGEGTY

>sp|RIB7_ARCFU|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KLEKIGEG 8
K+E+IGEG
Sbjct: 203 KIERIGEG 210


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LEKIGEGTY 10
LE++GE Y
Sbjct: 618 LERVGEADY 626


>sp|CSG_METAC|MAJOR S-layer protein|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 EKIGEGTY 10
E+IGEG Y
Sbjct: 565 EEIGEGMY 572


Query: 3 EKIGEGTY 10
E+IGEG Y
Sbjct: 288 EEIGEGLY 295


>sp|RFCS_HALMA|REPLICATION factor C small subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 LEKIGEGTY 10
LE+IGE Y
Sbjct: 294 LERIGETDY 302


>sp|DNLJ_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 LEKIGEGTY 10
+EK EGTY
Sbjct: 430 VEKRSEGTY 438


>sp|THI4_SULAC|THIAMINE thiazole synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KLEKIGEGTY 10
+LEK+ +G Y
Sbjct: 97 RLEKVEDGVY 106


>sp|GATD_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosphaera stadtmanae (strain ATCC

Query: 1 KLEKIGEG 8
K+EKI EG
Sbjct: 65 KIEKISEG 72


>sp|HIS2_METBU|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LEKIGEGT 9
LEK+GE T
Sbjct: 43 LEKVGEET 50


>sp|RFCS_NATPD|REPLICATION factor C small subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LEKIGEGTY 10
+E+IGE Y
Sbjct: 292 MERIGEADY 300


>sp|THI4_METS5|THIAMINE thiazole synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KLEKIGEGTY 10
KL+K EG Y
Sbjct: 93 KLQKFEEGVY 102


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LEKIGEGTY 10
LE IG+GT+
Sbjct: 170 LEVIGDGTH 178


>sp|CSG_METBF|MAJOR S-layer protein|Methanosarcina barkeri (strain Fusaro /

Query: 3 EKIGEGTY 10
E IGEG Y
Sbjct: 553 EDIGEGMY 560


>sp|Y760_METJA|UNCHARACTERIZED protein MJ0760|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLEKIGEGTY 10
K+E G+GTY
Sbjct: 128 KVEDKGDGTY 137


>sp|GPMI_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LEKIGEGTY 10
+E+IG G Y
Sbjct: 385 IERIGSGKY 393


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KIGEGT 9
KIGEGT
Sbjct: 249 KIGEGT 254




3|Sequence|11|20|GEGTYGTVFK

>sp|Y823_METJA|UNCHARACTERIZED ATP-binding protein MJ0823|Methanocaldococcus jannaschii (strain

Query: 3 GTYGTVFK 10
GTYG +FK
Sbjct: 71 GTYGNIFK 78


>sp|TRUD_THEVO|PROBABLE tRNA pseudouridine synthase D|Thermoplasma volcanium (strain ATCC

Query: 1 GEGTYGTVF 9
G+G Y TVF
Sbjct: 382 GKGIYATVF 390


>sp|RS7_HALMA|SMALL ribosomal subunit protein uS7|Haloarcula marismortui (strain ATCC

Query: 1 GEGTYGTVFK 10
EG YG FK
Sbjct: 157 AEGVYGGSFK 166


>sp|RS7_NATPD|SMALL ribosomal subunit protein uS7|Natronomonas pharaonis (strain ATCC

Query: 1 GEGTYGTVFK 10
EGTY FK
Sbjct: 154 AEGTYNDSFK 163


>sp|Y089_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 GEGTYGTVF 9
EG Y TVF
Sbjct: 88 AEGNYMTVF 96


>sp|PGMI_AERPE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Aeropyrum pernix (strain

Query: 1 GEGTYGTVF 9
EG YG VF
Sbjct: 236 AEGLYGAVF 244


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 1 GEGTYGTVF 9
G+G YG F
Sbjct: 134 GDGDYGVSF 142


>sp|MCRB_METVA|METHYL-COENZYME M reductase subunit beta|Methanococcus vannielii

Query: 1 GEGTYGTVFK 10
G+GT GTV +
Sbjct: 260 GKGTVGTVVQ 269


>sp|ADEC_META3|ADENINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 EGTYGTVFK 10
+GTY +FK
Sbjct: 274 KGTYNKLFK 282


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EGTYGTVF 9
TYGTVF
Sbjct: 123 NSTYGTVF 130


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 GEGTYGTVFK 10
G+G YG V +
Sbjct: 765 GKGVYGVVIE 774


>sp|MCRY_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 GEGTYGTV 8
G+GT GTV
Sbjct: 260 GKGTVGTV 267




4|Sequence|16|25|GTVFKAKNRE

>sp|SUA5_SULTO|THREONYLCARBAMOYL-AMP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VFKAKNR 9
+F+AKNR
Sbjct: 53 IFQAKNR 59




5|Sequence|21|30|AKNRETHEIV

>sp|RL15_META3|LARGE ribosomal subunit protein uL15|Methanococcus aeolicus (strain

Query: 1 AKNRETHEIV 10
+KN+E+ EIV
Sbjct: 83 SKNKESFEIV 92


>sp|ARCH_THEAC|PROTEIN archease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KNRETHEIV 10
+NR+ HE++
Sbjct: 52 ENRKMHEVI 60


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KNRETHEI 9
KNR HEI
Sbjct: 87 KNRNEHEI 94




6|Sequence|26|35|THEIVALKRV

***** No hits found ******


7|Sequence|31|40|ALKRVRLDDD

>sp|Y976_METJA|UNCHARACTERIZED protein MJ0976|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LKRVRLDD 9
LK +RLDD
Sbjct: 276 LKNIRLDD 283


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 1 ALKRVRLD 8
ALKR R+D
Sbjct: 64 ALKRARID 71


>sp|HMGCS_PYRIL|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ALKRVRLD 8
ALKR R+D
Sbjct: 63 ALKRARID 70


>sp|KTHY1_SULTO|PROBABLE thymidylate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ALKRVRLDD 9
A+KR+R DD
Sbjct: 128 AIKRIRKDD 136


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 1 ALKRVRLDDD 10
A KR+R DDD
Sbjct: 86 ANKRLRSDDD 95


>sp|AMT2_HALMT|AMMONIUM transporter Amt2|Haloferax mediterranei (strain ATCC 33500

Query: 3 KRVRLDD 9
KR+R+DD
Sbjct: 329 KRLRIDD 335


>sp|TTDA_METJA|PUTATIVE L(+)-tartrate dehydratase subunit alpha|Methanocaldococcus

Query: 1 ALKRVRLD 8
A+KR++LD
Sbjct: 275 AIKRIKLD 282


>sp|IF2A_PYRAE|TRANSLATION initiation factor 2 subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 ALKRVRLDD 9
+LKRVR+D+
Sbjct: 80 SLKRVRVDE 88


>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 RVRLDD 9
RVRLDD
Sbjct: 324 RVRLDD 329


>sp|DCD_THESM|DCTP deaminase|Thermococcus sibiricus (strain DSM 12597

Query: 2 LKRVRLDDD 10
L+RV+L DD
Sbjct: 63 LERVKLPDD 71


>sp|DCD_PYRHO|DCTP deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LKRVRLDDD 10
L+RV+L DD
Sbjct: 63 LERVKLPDD 71




8|Sequence|36|45|RLDDDDEGVP

>sp|RL6_HYPBU|LARGE ribosomal subunit protein uL6|Hyperthermus butylicus (strain DSM

Query: 1 RLDDDDEG 8
RLD+D+EG
Sbjct: 48 RLDEDEEG 55


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 1 RLDDDDEGV 9
R+DD +EGV
Sbjct: 791 RMDDLNEGV 799


>sp|PCNA_NITMS|DNA polymerase sliding clamp|Nitrosopumilus maritimus (strain SCM1)

Query: 2 LDDDDEGV 9
LD DDEG+
Sbjct: 177 LDKDDEGI 184


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LDDDDEGVP 10
L+D +EGVP
Sbjct: 669 LEDPNEGVP 677


>sp|MPCT_HALS3|TRANSDUCER protein MpcT|Halobacterium salinarum (strain ATCC 29341

Query: 4 DDDEGVP 10
+D+EGVP
Sbjct: 594 EDEEGVP 600


>sp|ARCA_HALS3|ARGININE deiminase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RLDDDDEGV 9
R DDD+GV
Sbjct: 431 RFSDDDDGV 439




9|Sequence|41|50|DEGVPSSALR

>sp|AATA_PYRAR|A-TYPE ATP synthase subunit A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DEGVPSSALR 10
+ GVP+SALR
Sbjct: 541 EAGVPASALR 550


>sp|COFE_METTH|COENZYME F420:L-glutamate ligase|Methanothermobacter thermautotrophicus

Query: 1 DEGVPSSALR 10
DEGVP+ +R
Sbjct: 216 DEGVPAVIIR 225


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DEGVPSSALR 10
D G+P ALR
Sbjct: 284 DIGIPEDALR 293


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EGVPSSAL 9
EG PS AL
Sbjct: 240 EGTPSEAL 247


>sp|Y1254_IGNH4|UPF0173 metal-dependent hydrolase Igni_1254|Ignicoccus hospitalis (strain

Query: 1 DEGVPSSAL 9
D+GVP+ A+
Sbjct: 122 DKGVPTGAI 130


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 GVPSSALR 10
G+P+ ALR
Sbjct: 573 GIPAEALR 580


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 2 EGVPSSALR 10
+ VPSSAL+
Sbjct: 700 QSVPSSALQ 708


>sp|PTH_AERPE|PEPTIDYL-TRNA hydrolase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DEGVPSSALR 10
+EG+P+S +R
Sbjct: 80 EEGLPASFVR 89


>sp|DPHB_NATPD|DIPHTHINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EGVPSSAL 9
EGVP S L
Sbjct: 144 EGVPGSVL 151




10|Sequence|46|55|SSALREICLL

>sp|TRPD_CALMQ|ANTHRANILATE phosphoribosyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 SSALREICL 9
+ ALRE CL
Sbjct: 57 AKALRETCL 65


>sp|SYFB_METHJ|PHENYLALANINE--TRNA ligase beta subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SSALREIC 8
+SA+R+IC
Sbjct: 360 ASAIRDIC 367


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 1 SSALREIC 8
+ A+REIC
Sbjct: 335 AEAMREIC 342


>sp|ILVH_ARCFU|PROBABLE acetolactate synthase small subunit|Archaeoglobus fulgidus

Query: 1 SSALREICLL 10
SS RE+CL+
Sbjct: 79 SSVERELCLI 88


>sp|DPHB_THEAC|DIPHTHINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SSALREICLL 10
S +REIC+L
Sbjct: 190 SGIIREICVL 199


>sp|AGOG_METKA|N-GLYCOSYLASE/DNA lyase|Methanopyrus kandleri (strain AV19 /

Query: 4 LREICLL 10
LREIC++
Sbjct: 12 LREICVI 18




11|Sequence|51|60|EICLLKELKH

>sp|IDI2_METTP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EICLLKEL 8
EICL KE+
Sbjct: 12 EICLKKEV 19


>sp|TRPC_PYRAR|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 LLKELKH 10
L+KEL+H
Sbjct: 234 LIKELRH 240




12|Sequence|56|65|KELKHKNIVR

>sp|GGR_METM7|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C7 /

Query: 1 KELKHKNIVR 10
K+LK+KNI++
Sbjct: 336 KDLKYKNILQ 345


>sp|GGR_METM6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C6 /

Query: 1 KELKHKNIVR 10
K+LK+KNI++
Sbjct: 336 KDLKYKNILQ 345


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 2 ELKHKNIVR 10
E KH +IVR
Sbjct: 360 EFKHDHIVR 368


>sp|PDXT_METAC|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina acetivorans

Query: 2 ELKHKNIV 9
E+KHK IV
Sbjct: 34 EIKHKGIV 41


>sp|RIFK_METS5|RIBOFLAVIN kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KELKHKNIVR 10
KEL+ +N+VR
Sbjct: 41 KELEERNLVR 50


>sp|SPSS_METAC|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KELKHKNI 8
KELK +NI
Sbjct: 339 KELKERNI 346


>sp|PDXT_METMA|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina mazei (strain

Query: 2 ELKHKNIV 9
E+KHK IV
Sbjct: 34 EIKHKGIV 41


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KELKHKNIV 9
KELK+ NI+
Sbjct: 46 KELKYPNII 54


>sp|KAD6_PYRAB|PUTATIVE adenylate kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 KELKHKNIV 9
KELK +N+V
Sbjct: 61 KELKDRNVV 69


>sp|SYFA_METBF|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 KELKHKNIVR 10
KEL +N++R
Sbjct: 322 KELSRRNVLR 331


>sp|SPSS2_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanococcoides burtonii (strain DSM 6242

Query: 1 KELKHKNI 8
KELK +NI
Sbjct: 342 KELKSRNI 349


>sp|GATD_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C5 /

Query: 1 KELKHKNIV 9
KEL KNIV
Sbjct: 399 KELMSKNIV 407


>sp|RS25_SACS2|SMALL ribosomal subunit protein eS25|Saccharolobus solfataricus (strain

Query: 1 KELKHKNIVR 10
KEL+++N+V+
Sbjct: 86 KELENQNVVK 95


>sp|RS25_SULTO|SMALL ribosomal subunit protein eS25|Sulfurisphaera tokodaii (strain

Query: 1 KELKHKNIV 9
KEL KN+V
Sbjct: 37 KELTSKNVV 45


>sp|GGR_METMP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ELKHKNIVR 10
+LK+KNI++
Sbjct: 337 DLKYKNILQ 345




13|Sequence|61|70|KNIVRLHDVL

>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 2 NIVRLHDV 9
+IVR+HDV
Sbjct: 788 DIVRVHDV 795


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KNIVRLHDVL 10
+ IVRLHD L
Sbjct: 273 EEIVRLHDPL 282


>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 2 NIVRLHDV 9
+IVR+HDV
Sbjct: 804 DIVRVHDV 811


>sp|SYC_ARCFU|CYSTEINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NIVRLHDVL 10
NIVR+ DVL
Sbjct: 275 NIVRIRDVL 283


>sp|SUMT_METBF|S-ADENOSYL-L-METHIONINE-DEPENDENT uroporphyrinogen III methyltransferase|Methanosarcina barkeri

Query: 2 NIVRLHDVL 10
++V LHD+L
Sbjct: 238 DVVHLHDIL 246


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KNIVRLHD 8
K IVRLHD
Sbjct: 581 KVIVRLHD 588


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KNIVRLHD 8
K IVRLHD
Sbjct: 581 KVIVRLHD 588


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KNIVRLHDV 9
KNI +HDV
Sbjct: 605 KNITAVHDV 613


>sp|NPD1_PYRAE|NAD-DEPENDENT protein deacetylase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KNIVRLHDVL 10
KN++ LH L
Sbjct: 117 KNVIELHGAL 126


>sp|RTCA_STAMF|RNA 3'-terminal phosphate cyclase|Staphylothermus marinus (strain ATCC

Query: 1 KNIVRLHDV 9
K I+R+H V
Sbjct: 345 KGIIRIHGV 353


>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 1 KNIVRLHD 8
K +VRLHD
Sbjct: 581 KVMVRLHD 588


>sp|NPD_SACS2|NAD-DEPENDENT protein deacetylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KNIVRLHDVL 10
KN++ LH +
Sbjct: 110 KNVIELHGTM 119




14|Sequence|66|75|LHDVLHSDKK

>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LHDVLHSDKK 10
LHD+LH+D +
Sbjct: 848 LHDLLHTDAE 857


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HDVLHSDK 9
HD+LH ++
Sbjct: 192 HDILHGEE 199


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 HDVLHSDK 9
HD+LH ++
Sbjct: 192 HDILHGEE 199


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 3 DVLHSDKK 10
+V HSD+K
Sbjct: 531 EVTHSDRK 538


>sp|RIFK_CENSY|RIBOFLAVIN kinase|Cenarchaeum symbiosum (strain A)

Query: 1 LHDVLHS 7
LHD LHS
Sbjct: 49 LHDSLHS 55


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 LHDVLHSDK 9
LH+++++DK
Sbjct: 422 LHEIINTDK 430




15|Sequence|71|80|HSDKKLTLVF

>sp|TPIS_METBF|TRIOSEPHOSPHATE isomerase|Methanosarcina barkeri (strain Fusaro /

Query: 1 HSDKKLTL 8
HS+K+LTL
Sbjct: 93 HSEKRLTL 100


>sp|PYRB_NATPD|ASPARTATE carbamoyltransferase catalytic subunit|Natronomonas pharaonis

Query: 1 HSDKKLTLVF 10
HSDK L L+F
Sbjct: 38 HSDKLLGLLF 47


>sp|TPIS_METMJ|TRIOSEPHOSPHATE isomerase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 HSDKKLTL 8
HS+++LTL
Sbjct: 93 HSERRLTL 100


>sp|TPIS_METMA|TRIOSEPHOSPHATE isomerase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HSDKKLTL 8
HS+++LTL
Sbjct: 93 HSERRLTL 100


>sp|TPIS_METAC|TRIOSEPHOSPHATE isomerase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HSDKKLTL 8
HS+++LTL
Sbjct: 93 HSERRLTL 100


>sp|MOBB_METJA|PUTATIVE molybdopterin-guanine dinucleotide biosynthesis

Query: 1 HSDKKLTLV 9
HSDKK+ ++
Sbjct: 24 HSDKKIAVI 32


>sp|FTSY_HALVD|SIGNAL recognition particle receptor FtsY|Haloferax volcanii (strain ATCC

Query: 2 SDKKLTLVF 10
+DK +TL+F
Sbjct: 255 ADKPVTLIF 263


>sp|HEM1_THEVO|GLUTAMYL-TRNA reductase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SDKKLTLVF 10
SDK L+L+F
Sbjct: 114 SDKFLSLIF 122




16|Sequence|76|85|LTLVFEFCDQ

>sp|THRC_METJA|THREONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TLVFEFCDQ 10
T+ FE CDQ
Sbjct: 211 TIAFEICDQ 219


>sp|PURQ_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanocaldococcus jannaschii (strain ATCC

Query: 3 LVFEFCDQ 10
+VF++CD+
Sbjct: 162 IVFKYCDE 169


>sp|MOAA_METTM|PROBABLE GTP 3',8-cyclase|Methanothermobacter marburgensis (strain ATCC

Query: 4 VFEFCDQ 10
+FEFC Q
Sbjct: 170 MFEFCRQ 176


>sp|PURQ_METMP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain DSM 14266

Query: 3 LVFEFCD 9
+VF +CD
Sbjct: 182 IVFSYCD 188


>sp|PURQ_METM5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain C5 /

Query: 3 LVFEFCD 9
+VF +CD
Sbjct: 179 IVFSYCD 185


>sp|THIL_METJA|THIAMINE-MONOPHOSPHATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VFEFCD 9
V EFCD
Sbjct: 248 VIEFCD 253




17|Sequence|81|90|EFCDQDLKKY

>sp|FEOB_METJA|FE(2+) transporter FeoB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DQDLKKY 10
D+DLKKY
Sbjct: 190 DEDLKKY 196


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 2 FCDQDLKKY 10
+ D+DLK+Y
Sbjct: 157 YTDKDLKRY 165


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 FCDQDLKK 9
F D+DLKK
Sbjct: 494 FTDEDLKK 501


>sp|XPD_SULAC|ATP-DEPENDENT DNA helicase XPD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EFCDQDLKKY 10
EF D DL++Y
Sbjct: 166 EFIDIDLREY 175


>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EFCDQDLKKY 10
EF D+ KKY
Sbjct: 424 EFVDKFFKKY 433


>sp|DHYS_METS5|PROBABLE deoxyhypusine synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 EFCDQDLKK 9
EF D++L+K
Sbjct: 110 EFSDEELRK 118


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EFCDQDLKKY 10
E C++ LKKY
Sbjct: 420 EACERLLKKY 429


>sp|DHE4_SACSH|NADP-SPECIFIC glutamate dehydrogenase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 EFCDQDLK 8
+F DQDL+
Sbjct: 395 KFADQDLR 402


>sp|RL30_STAMF|LARGE ribosomal subunit protein uL30|Staphylothermus marinus (strain

Query: 1 EFCDQDLKKY 10
EF D+ L KY
Sbjct: 85 EFVDKYLSKY 94


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 FCDQDLKK 9
F D DLKK
Sbjct: 478 FTDADLKK 485


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 FCDQDLKK 9
F D DLKK
Sbjct: 478 FTDADLKK 485


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 FCDQDLKK 9
F D DLKK
Sbjct: 478 FTDADLKK 485


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FCDQDLKK 9
F D DLKK
Sbjct: 478 FTDADLKK 485


>sp|DCDB_METST|DCTP deaminase, dUMP-forming|Methanosphaera stadtmanae (strain ATCC

Query: 4 DQDLKKY 10
D+D+KKY
Sbjct: 6 DKDIKKY 12


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 EFCDQDLKK 9
E+C QD +K
Sbjct: 750 EYCQQDKQK 758


>sp|CAS2_KORCO|CRISPR-ASSOCIATED endoribonuclease Cas2|Korarchaeum cryptofilum (strain OPF8)

Query: 3 CDQDLKKY 10
CD+DLK +
Sbjct: 73 CDRDLKMH 80


>sp|KAE1B_METAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 EFCDQDLKKY 10
E C +D K+Y
Sbjct: 183 EACAKDAKRY 192


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 EFCDQDLK 8
+F D+DLK
Sbjct: 418 DFADEDLK 425


>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 FCDQDLKKY 10
F DQD +KY
Sbjct: 321 FSDQDEEKY 329


>sp|IF6_PYRAR|TRANSLATION initiation factor 6|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EFCDQDLKK 9
E D+DLKK
Sbjct: 161 EATDEDLKK 169


>sp|COFD_METVS|2-PHOSPHO-L-LACTATE transferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 FCDQDLKKY 10
FC + LK Y
Sbjct: 74 FCHEQLKNY 82


>sp|HIS8_METM5|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C5 /

Query: 1 EFCDQDLKK 9
EFC+ LKK
Sbjct: 323 EFCEALLKK 331


>sp|HIS8_METMP|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EFCDQDLKK 9
EFC+ LKK
Sbjct: 323 EFCEALLKK 331


>sp|RS13_SULAC|SMALL ribosomal subunit protein uS13|Sulfolobus acidocaldarius (strain

Query: 1 EFCDQDLKK 9
E D+D+KK
Sbjct: 55 EISDEDIKK 63


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 2 FCDQDLKKY 10
F D +L+KY
Sbjct: 818 FLDDELEKY 826


>sp|HIS8_METM6|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C6 /

Query: 1 EFCDQDLKK 9
EFC+ LKK
Sbjct: 323 EFCEALLKK 331


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 3 CDQDLKKY 10
C +++KKY
Sbjct: 9 CSENMKKY 16


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EFCDQDLKK 9
EFC++ LK+
Sbjct: 325 EFCEELLKR 333




18|Sequence|86|95|DLKKYFDSCN

>sp|F16PA_METHJ|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LKKYFDSC 9
L+KY +SC
Sbjct: 15 LRKYLESC 22


>sp|HELS_THEVO|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LKKYFD 7
LKKYFD
Sbjct: 487 LKKYFD 492


>sp|RRP4_PYRHO|EXOSOME complex component Rrp4|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DLKKYFD 7
DL+K+FD
Sbjct: 108 DLRKFFD 114


>sp|RRP4_PYRFU|EXOSOME complex component Rrp4|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DLKKYFD 7
DL+K+FD
Sbjct: 108 DLRKFFD 114


>sp|RRP4_PYRAB|EXOSOME complex component Rrp4|Pyrococcus abyssi (strain GE5 /

Query: 1 DLKKYFD 7
DL+K+FD
Sbjct: 108 DLRKFFD 114


>sp|GSA1_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 1|Cenarchaeum symbiosum (strain A)

Query: 1 DLKKYFDSCN 10
D +KY D CN
Sbjct: 44 DGRKYTDLCN 53


>sp|HFLX_NITMS|GTPASE HflX|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DLKKYFDSC 9
+LKK F SC
Sbjct: 277 ELKKKFSSC 285


>sp|TRKA_PYRAB|TRK system potassium uptake protein|Pyrococcus abyssi (strain GE5 /

Query: 1 DLKKYFD 7
+LK+YFD
Sbjct: 113 ELKRYFD 119


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 1 DLKKYFD 7
DLK+YF+
Sbjct: 161 DLKRYFE 167


>sp|Y227_METJA|UNCHARACTERIZED protein MJ0227|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LKKYFDSCN 10
LKKY+D N
Sbjct: 207 LKKYYDELN 215


>sp|ILVC_PYRFU|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 5 YFDSCN 10
YF++CN
Sbjct: 228 YFEACN 233


>sp|ILVC_PYRAB|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 5 YFDSCN 10
YF++CN
Sbjct: 228 YFEACN 233


>sp|YNH2_METBA|UNCHARACTERIZED protein in nifH2 5'region|Methanosarcina barkeri

Query: 2 LKKYFDSC 9
LK Y DSC
Sbjct: 70 LKNYPDSC 77


>sp|RS3_METS5|SMALL ribosomal subunit protein uS3|Metallosphaera sedula (strain

Query: 1 DLKKYF 6
D+KKYF
Sbjct: 3 DIKKYF 8


>sp|CBIX_SULTO|SIROHYDROCHLORIN cobaltochelatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LKKYFD 7
L+KYFD
Sbjct: 27 LRKYFD 32


>sp|DCDB_METST|DCTP deaminase, dUMP-forming|Methanosphaera stadtmanae (strain ATCC

Query: 1 DLKKYFD 7
D+KKY D
Sbjct: 8 DIKKYLD 14


>sp|CSA2A_SACS2|CRISPR-ASSOCIATED protein Cas7/Csa2 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DLKKYFDSCN 10
D+KKY D N
Sbjct: 271 DIKKYIDLVN 280


>sp|Y300_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0300|Methanocaldococcus

Query: 2 LKKYFDS 8
L+KYFD+
Sbjct: 41 LEKYFDA 47


>sp|T2MW_METWO|TYPE II restriction enzyme MwoI|Methanothermobacter wolfeii

Query: 2 LKKYFDSC 9
LKKYFD
Sbjct: 346 LKKYFDPI 353


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DLKKYFDSC 9
D +KY +SC
Sbjct: 159 DGRKYVESC 167


>sp|Y1150_METJA|UPF0215 protein MJ1150|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LKKYFDSCN 10
LKKYFD +
Sbjct: 115 LKKYFDDAD 123


>sp|Y2310_ARCFU|MEMO1 family protein AF_2310|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DLKKYFDS 8
D+KKY+++
Sbjct: 199 DVKKYYET 206


>sp|DHAS_METJA|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KKYFDSC 9
KKY D+C
Sbjct: 48 KKYKDAC 54


>sp|TYSY_METJA|PUTATIVE thymidylate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LKKYFDSC 9
+KKYF C
Sbjct: 210 IKKYFPEC 217


>sp|GPMI_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DLKKYFDSCN 10
D+K++ + CN
Sbjct: 165 DMKEHVEYCN 174


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LKKYFDS 8
LKKYF S
Sbjct: 426 LKKYFPS 432


>sp|TRM1_ARCFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Archaeoglobus fulgidus

Query: 1 DLKKYFDS 8
D K+YFD+
Sbjct: 36 DSKEYFDA 43


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 1 DLKKYFDSCN 10
DL+KY D +
Sbjct: 388 DLEKYIDDAD 397


>sp|Y1295_METJA|UNCHARACTERIZED protein MJ1295|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLKKYFD 7
+LKKY+D
Sbjct: 57 ELKKYWD 63


>sp|Y739_METJA|UNCHARACTERIZED protein MJ0739|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLKKYFDSCN 10
D+KK+F++ N
Sbjct: 65 DIKKFFEANN 74


>sp|SYH_METM7|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 LKKYFDSCN 10
L+K FDS N
Sbjct: 28 LRKVFDSYN 36




19|Sequence|91|100|FDSCNGDLDP

>sp|PGMUT_SULTO|PHOSPHOGLUCOSAMINE/PHOSPHOGALACTOSAMINE mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 SCNGDLDP 10
+ NG+LDP
Sbjct: 201 TINGNLDP 208


>sp|FWDC_METTM|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 4 CNGDLDP 10
CNG ++P
Sbjct: 264 CNGHIEP 270


>sp|TRMJ_METJA|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Methanocaldococcus

Query: 1 FDSCNGDLD 9
FD GDLD
Sbjct: 66 FDEAIGDLD 74


>sp|Y2269_METMJ|UPF0210 protein Memar_2269|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FDSCNGDLD 9
D C+ DLD
Sbjct: 31 LDCCDSDLD 39


>sp|FWDC_METTH|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 4 CNGDLDP 10
CNG ++P
Sbjct: 264 CNGHIEP 270


>sp|TF2B4_HALSA|TRANSCRIPTION initiation factor IIB 4|Halobacterium salinarum (strain ATCC

Query: 4 CNGDL 8
CNGDL
Sbjct: 35 CNGDL 39


>sp|NAC_META3|NASCENT polypeptide-associated complex protein|Methanococcus aeolicus

Query: 1 FDSCNGDL 8
+ CNGD+
Sbjct: 114 LEECNGDI 121


>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 CNGDLDP 10
C G++DP
Sbjct: 173 CTGEIDP 179


>sp|HIS7_HALWD|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 CNGDLD 9
C+GDLD
Sbjct: 70 CDGDLD 75


>sp|HIS7_HALSA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Halobacterium salinarum (strain ATCC 700922

Query: 4 CNGDLD 9
C+GDLD
Sbjct: 57 CDGDLD 62


>sp|HIS7_HALS3|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Halobacterium salinarum (strain ATCC 29341

Query: 4 CNGDLD 9
C+GDLD
Sbjct: 57 CDGDLD 62


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DSCNGDLDP 10
D+C LDP
Sbjct: 159 DNCGRTLDP 167


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 4 CNGDLDP 10
CN D+DP
Sbjct: 728 CNIDVDP 734


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DSCNGDLDP 10
D+C LDP
Sbjct: 159 DNCGRTLDP 167


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 FDSCNGDLD 9
FD+ + DLD
Sbjct: 30 FDAADSDLD 38


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 FDSCNGDLD 9
FD+ + DLD
Sbjct: 30 FDAADSDLD 38




20|Sequence|96|105|GDLDPEIVKS

>sp|DNAG_METKA|DNA primase DnaG|Methanopyrus kandleri (strain AV19 /

Query: 1 GDLDPEIVK 9
GDLDPEI K
Sbjct: 393 GDLDPEIKK 401


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GDLDPEIVK 9
G+LDPE++K
Sbjct: 408 GELDPEVMK 416


>sp|CYDE_METMP|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GDLDPEIVK 9
GDLD +IVK
Sbjct: 381 GDLDSDIVK 389


>sp|TRPD_METBU|ANTHRANILATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 2 DLDPEIVKS 10
DL+P++VKS
Sbjct: 131 DLEPDLVKS 139


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GDLDPEIV 8
GD++PEI+
Sbjct: 194 GDIEPEII 201


>sp|CYDE_METM7|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain C7 /

Query: 1 GDLDPEIVK 9
GDLD +IVK
Sbjct: 382 GDLDCDIVK 390


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GDLDPEIV 8
G++DPEI+
Sbjct: 825 GNIDPEII 832


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 1 GDLDPEIVKS 10
G+L P+IVK
Sbjct: 708 GELQPKIVKQ 717


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LDPEIVK 9
L+PEIVK
Sbjct: 222 LNPEIVK 228


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 GDLDPEI 7
GD++PEI
Sbjct: 202 GDMEPEI 208


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GDLDPEI 7
GD++PEI
Sbjct: 191 GDMEPEI 197


>sp|RSMA_METHJ|PROBABLE ribosomal RNA small subunit|Methanospirillum hungatei JF-1 (strain

Query: 2 DLDPEIVKS 10
DL+PEI+ S
Sbjct: 229 DLNPEILSS 237


>sp|PSB_METTE|PROTEASOME subunit beta|Methanosarcina thermophila

Query: 3 LDPEIVKS 10
LDPE VKS
Sbjct: 197 LDPEEVKS 204


>sp|DCUP_THEAC|UROPORPHYRINOGEN decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GDLDPEIVK 9
G+LDP IV
Sbjct: 275 GNLDPAIVN 283


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GDLDPEI 7
GD++PEI
Sbjct: 190 GDMEPEI 196


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GDLDPEIV 8
G +DPE++
Sbjct: 282 GQMDPEVI 289


>sp|MSRA_METMP|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 2 DLDPEIV 8
D DPEI+
Sbjct: 61 DYDPEII 67


>sp|PSB_METMA|PROTEASOME subunit beta|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LDPEIVKS 10
LDPE VKS
Sbjct: 197 LDPEEVKS 204


>sp|Y164_METJA|UNCHARACTERIZED protein MJ0164|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DLDPEIVK 9
D+DP IVK
Sbjct: 365 DIDPSIVK 372


>sp|PSB_METBF|PROTEASOME subunit beta|Methanosarcina barkeri (strain Fusaro /

Query: 3 LDPEIVKS 10
LDPE VKS
Sbjct: 197 LDPEEVKS 204


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GDLDPEI 7
GD++PEI
Sbjct: 196 GDIEPEI 202


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GDLDPEIV 8
G +DPE++
Sbjct: 282 GQMDPEVI 289


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GDLDPEIV 8
G +DPE++
Sbjct: 282 GQMDPEVI 289


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GDLDPEIV 8
G +DPE++
Sbjct: 282 GQMDPEVI 289


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GDLDPEIV 8
G +DPE++
Sbjct: 287 GQMDPEVI 294


>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain SCM1)

Query: 3 LDPEIV 8
LDPEIV
Sbjct: 136 LDPEIV 141


>sp|SRP54_SULTO|SIGNAL recognition particle 54 kDa|Sulfurisphaera tokodaii (strain DSM

Query: 1 GDLDPEIV 8
GD++PE++
Sbjct: 83 GDINPEVM 90


>sp|PSB_METAC|PROTEASOME subunit beta|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LDPEIVKS 10
LDPE VKS
Sbjct: 197 LDPEEVKS 204


>sp|HISX_HALMA|HISTIDINOL dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GDLDPEIVKS 10
GD DPE+V +
Sbjct: 237 GDADPELVAA 246


>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 DPEIVK 9
DPEIVK
Sbjct: 216 DPEIVK 221


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 4 DPEIVKS 10
+PEIVKS
Sbjct: 459 NPEIVKS 465


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 LDPEIVK 9
+DPE+VK
Sbjct: 356 VDPEVVK 362


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 4 DPEIVKS 10
+PEIVKS
Sbjct: 459 NPEIVKS 465


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DLDPEIVK 9
D DPEI++
Sbjct: 376 DADPEIIE 383


>sp|AROD_THEKO|3-DEHYDROQUINATE dehydratase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DLDPEIVK 9
+L+PEI+K
Sbjct: 132 ELEPEIIK 139


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GDLDPEI 7
GD++PEI
Sbjct: 251 GDVEPEI 257


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 2 DLDPEIVK 9
DL+PEI +
Sbjct: 692 DLEPEIAR 699


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DLDPEIVKS 10
D+DP IV++
Sbjct: 350 DIDPRIVEN 358


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GDLDPEI 7
GD++PEI
Sbjct: 191 GDVEPEI 197


>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 1 GDLDPEIVKS 10
G L P+ VKS
Sbjct: 433 GKLSPDYVKS 442


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GDLDPEI 7
GD++PEI
Sbjct: 197 GDVEPEI 203


>sp|PYRDB_METAR|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanocella arvoryzae (strain

Query: 4 DPEIVKS 10
DPE+V+S
Sbjct: 138 DPELVRS 144


>sp|ARLY_METTH|ARGININOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 DLDPEIVK 9
+LDPE+V+
Sbjct: 422 ELDPELVE 429


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DLDPEIVKS 10
D+DP IV++
Sbjct: 350 DIDPRIVEN 358


>sp|IF6_METJA|TRANSLATION initiation factor 6|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DLDPEIVKS 10
DL+ EI+KS
Sbjct: 94 DLNVEIIKS 102


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 2 DLDPEIVK 9
DL+PEI +
Sbjct: 692 DLEPEIAR 699


>sp|RPO2N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 4 DPEIVK 9
DPEIVK
Sbjct: 252 DPEIVK 257


>sp|RPO2N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 4 DPEIVK 9
DPEIVK
Sbjct: 252 DPEIVK 257


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 DLDPEIVK 9
D+DP IV+
Sbjct: 350 DIDPRIVE 357


>sp|RL3_METAC|LARGE ribosomal subunit protein uL3|Methanosarcina acetivorans (strain

Query: 2 DLDPEIVK 9
DLDPE+ +
Sbjct: 105 DLDPELKR 112


>sp|RL3_METBF|LARGE ribosomal subunit protein uL3|Methanosarcina barkeri (strain Fusaro

Query: 2 DLDPEI 7
DLDPE+
Sbjct: 105 DLDPEL 110


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 GDLDPEIVKS 10
G+LD EI+ S
Sbjct: 372 GELDMEIIMS 381


>sp|SURE_NATPD|5'-NUCLEOTIDASE SurE|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DLDPEIV 8
DLDP+IV
Sbjct: 76 DLDPDIV 82


>sp|MTAD_PYRAB|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus abyssi (strain GE5 /

Query: 4 DPEIVKS 10
DP IVKS
Sbjct: 326 DPSIVKS 332


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 GDLDPEIVKS 10
G+LD EI+ S
Sbjct: 372 GELDMEIIMS 381




21|Sequence|101|110|EIVKSFLFQL

>sp|SYW_ARCFU|TRYPTOPHAN--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EIVKSFL 7
E+VKSFL
Sbjct: 395 ELVKSFL 401




22|Sequence|106|115|FLFQLLKGLG

>sp|SRP54_ACIAM|SIGNAL recognition particle 54 kDa|Acidianus ambivalens (Desulfurolobus

Query: 2 LFQLLKGLG 10
LFQLL G+G
Sbjct: 350 LFQLLPGIG 358


>sp|TRPA_METAC|TRYPTOPHAN synthase alpha chain|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 FQLLKGLG 10
F+L++GLG
Sbjct: 93 FELVRGLG 100




23|Sequence|111|120|LKGLGFCHSR

>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 5 GFCHSR 10
GFCH R
Sbjct: 695 GFCHQR 700


>sp|HIS52_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 LKGLGFCHSR 10
LKGLGF +++
Sbjct: 95 LKGLGFINAK 104


>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 1 LKGLGFC 7
LKGLG C
Sbjct: 241 LKGLGVC 247


>sp|CFBD_METTH|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanothermobacter

Query: 1 LKGLGFCH 8
L+GLG+ H
Sbjct: 318 LRGLGYTH 325


>sp|RAD50_METAC|DNA double-strand break repair Rad50|Methanosarcina acetivorans (strain

Query: 1 LKGLGF 6
LKGLGF
Sbjct: 502 LKGLGF 507


>sp|PYRD_HALSA|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC

Query: 1 LKGLGFCH 8
L GLGF H
Sbjct: 77 LAGLGFGH 84


>sp|PYRD_HALS3|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC

Query: 1 LKGLGFCH 8
L GLGF H
Sbjct: 77 LAGLGFGH 84


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LKGLGFCH 8
L G+GF H
Sbjct: 440 LSGMGFLH 447


>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LKGLGFCH 8
L G+GF H
Sbjct: 440 LSGMGFLH 447


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LKGLGFCH 8
L G+GF H
Sbjct: 439 LSGMGFLH 446


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LKGLGFCH 8
L G+GF H
Sbjct: 439 LSGMGFLH 446


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LKGLGFCH 8
L G+GF H
Sbjct: 439 LSGMGFLH 446


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LKGLGFCH 8
L G+GF H
Sbjct: 439 LSGMGFLH 446


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LKGLGFCH 8
L G+GF H
Sbjct: 439 LSGMGFLH 446


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LKGLGFCH 8
L G+GF H
Sbjct: 439 LSGMGFLH 446


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LKGLGFCH 8
L G+GF H
Sbjct: 439 LSGMGFLH 446


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 LKGLGFCH 8
L G+GF H
Sbjct: 439 LSGMGFLH 446


>sp|Y115_METJA|UNCHARACTERIZED protein MJ0115|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKGLGFC 7
L+GL FC
Sbjct: 16 LRGLAFC 22


>sp|RPIA_METJA|RIBOSE-5-PHOSPHATE isomerase A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKGLGFCHSR 10
+KG G CH++
Sbjct: 96 IKGGGGCHTQ 105


>sp|RPIA_META3|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LKGLGFCHSR 10
+KG G CH++
Sbjct: 104 IKGGGGCHTQ 113


>sp|RPIA_METVS|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus vannielii (strain ATCC 35089

Query: 1 LKGLGFCHS 9
+KG G CH+
Sbjct: 109 IKGGGGCHT 117


>sp|RPIA_METMP|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain DSM 14266

Query: 1 LKGLGFCHS 9
+KG G CH+
Sbjct: 109 IKGGGGCHT 117


>sp|RPIA_METM7|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain C7 /

Query: 1 LKGLGFCHS 9
+KG G CH+
Sbjct: 109 IKGGGGCHT 117


>sp|RPIA_METM6|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain C6 /

Query: 1 LKGLGFCHS 9
+KG G CH+
Sbjct: 109 IKGGGGCHT 117


>sp|RPIA_METM5|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain C5 /

Query: 1 LKGLGFCHS 9
+KG G CH+
Sbjct: 109 IKGGGGCHT 117


>sp|PRIS_PYRAR|DNA primase small subunit PriS|Pyrobaculum arsenaticum (strain DSM

Query: 1 LKGLGFCHSR 10
+KG+GF SR
Sbjct: 167 IKGVGFDPSR 176


>sp|Y783_METJA|UNCHARACTERIZED protein MJ0783|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKGLGFCHS 9
+KG G+C S
Sbjct: 65 IKGKGYCIS 73




24|Sequence|116|125|FCHSRNVLHR

>sp|DTDA_HYPBU|D-AMINOACYL-TRNA deacylase|Hyperthermus butylicus (strain DSM 5456

Query: 3 HSRNVLHR 10
H+RNVL R
Sbjct: 204 HTRNVLER 211


>sp|RIBL_METP4|FAD synthase|Methanolacinia petrolearia (strain DSM 11571

Query: 1 FCHSRNVLHR 10
FC SRN++ +
Sbjct: 124 FCSSRNIMKQ 133


>sp|RL6_HYPBU|LARGE ribosomal subunit protein uL6|Hyperthermus butylicus (strain DSM

Query: 1 FCHSRNVLHR 10
F H+RN++ R
Sbjct: 39 FSHARNIVIR 48


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 HSRNVLHR 10
HS N+L+R
Sbjct: 159 HSENILYR 166


>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 HSRNVLHR 10
HS N+L+R
Sbjct: 157 HSENILYR 164


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 HSRNVLHR 10
HS N+L+R
Sbjct: 157 HSENILYR 164


>sp|TF2B_METMZ|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (Methanosarcina

Query: 2 CHSRNVLH 9
C SRN++H
Sbjct: 44 CGSRNLVH 51


>sp|TF2B_METMA|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CHSRNVLH 9
C SRN++H
Sbjct: 44 CGSRNLVH 51


>sp|TF2B_METAC|TRANSCRIPTION initiation factor IIB|Methanosarcina acetivorans (strain ATCC

Query: 2 CHSRNVLH 9
C SRN++H
Sbjct: 44 CGSRNLVH 51


>sp|THYX_PYRAE|FLAVIN-DEPENDENT thymidylate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 CHSRNVLHR 10
CH++ + HR
Sbjct: 77 CHTQFIRHR 85




25|Sequence|121|130|NVLHRDLKPQ

>sp|G1PDH_METS5|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Metallosphaera sedula (strain ATCC 51363

Query: 2 VLHRDLK 8
++HRDLK
Sbjct: 214 IIHRDLK 220


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 4 HRDLKPQ 10
HRDL+P+
Sbjct: 690 HRDLEPE 696


>sp|GATD_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermococcus kodakarensis (strain ATCC

Query: 1 NVLHRDLKPQ 10
N++ D+KP+
Sbjct: 145 NIMSEDMKPE 154


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 4 HRDLKPQ 10
HRDL+P+
Sbjct: 691 HRDLEPE 697


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 4 HRDLKPQ 10
HRDL+P+
Sbjct: 690 HRDLEPE 696


>sp|ARNS_SULAC|SERINE/THREONINE-PROTEIN kinase ArnS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LHRDLKPQ 10
+H D+KPQ
Sbjct: 457 VHLDVKPQ 464


>sp|RS24_AERPE|SMALL ribosomal subunit protein eS24|Aeropyrum pernix (strain ATCC

Query: 2 VLHRDLKP 9
+LH +LKP
Sbjct: 39 ILHHELKP 46


>sp|NTPTH_SACS2|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VLHRDLKP 9
VLHR KP
Sbjct: 139 VLHRTQKP 146


>sp|APGM_THEVO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LHRDLKP 9
LH D+KP
Sbjct: 87 LHMDMKP 93


>sp|Y457_METJA|UNCHARACTERIZED metallohydrolase MJ0457|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NVLHRDLK 8
NVL+RD K
Sbjct: 349 NVLNRDAK 356




26|Sequence|126|135|DLKPQNLLIN

>sp|ARNS_SULAC|SERINE/THREONINE-PROTEIN kinase ArnS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DLKPQNLLI 9
D+KPQN+ +
Sbjct: 460 DVKPQNIFL 468


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 DLKPQNLLI 9
+LKPQ+++I
Sbjct: 800 ELKPQDVII 808


>sp|NTPPA_METMA|DTTP/UTP pyrophosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DLKPQNLLI 9
DL P+ LLI
Sbjct: 39 DLAPEELLI 47


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DLKPQNLLIN 10
+LKPQ+++++
Sbjct: 865 ELKPQDVILS 874


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 DLKPQNLLIN 10
+LKPQ+++++
Sbjct: 864 ELKPQDIILS 873


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 DLKPQNLLIN 10
+LKPQ+++++
Sbjct: 867 ELKPQDIILS 876




27|Sequence|131|140|NLLINRNGEL

>sp|ATGT_THEVO|TRNA-GUANINE(15) transglycosylase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LLINRNGEL 10
L++N NGEL
Sbjct: 591 LVVNENGEL 599


>sp|RNZ_METAC|RIBONUCLEASE Z|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LLINRNGEL 10
++INR GEL
Sbjct: 23 VMINREGEL 31


>sp|RNZ_HALVD|RIBONUCLEASE Z|Haloferax volcanii (strain ATCC 29605

Query: 2 LLINRNGE 9
L+NR+GE
Sbjct: 24 FLVNRDGE 31


>sp|DHQS_METM6|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 2 LLINRNGE 9
L++N+NGE
Sbjct: 273 LVVNKNGE 280


>sp|DHQS_METM5|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 LLINRNGE 9
L++N+NGE
Sbjct: 273 LVVNKNGE 280


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 NLLINRNGEL 10
NL++N G+L
Sbjct: 469 NLIVNEKGKL 478


>sp|DHQS_METMP|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LLINRNGE 9
L++N+NGE
Sbjct: 273 LVVNKNGE 280


>sp|GLCDH_METPS|GLUCOSE 1-dehydrogenase|Methanocella paludicola (strain DSM 17711

Query: 3 LINRNG 8
L+NRNG
Sbjct: 261 LVNRNG 266


>sp|DHQS_METM7|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 LLINRNGE 9
L++N+NGE
Sbjct: 273 LVVNKNGE 280


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 3 LINRNGEL 10
+IN NG+L
Sbjct: 661 IINENGQL 668


>sp|TRM1_PYRAB|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus abyssi (strain

Query: 1 NLLINRNGEL 10
N+L+N GEL
Sbjct: 90 NVLLNFKGEL 99


>sp|YPV5B_METTF|UNCHARACTERIZED protein ORF5B|Methanothermobacter thermautotrophicus

Query: 3 LINRNGEL 10
L+NR GEL
Sbjct: 177 LVNRTGEL 184




28|Sequence|136|145|RNGELKLADF

>sp|PUR7_METBF|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RNGELKLAD 9
RNGE+ LAD
Sbjct: 182 RNGEIILAD 190


>sp|GATB_METB6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanoregula boonei (strain DSM 21154

Query: 2 NGELKLADF 10
GELK+A+F
Sbjct: 316 TGELKMANF 324


>sp|RL30_THEKO|LARGE ribosomal subunit protein uL30|Thermococcus kodakarensis (strain

Query: 2 NGELKLADF 10
NGE+KL D
Sbjct: 102 NGEMKLRDL 110


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 2 NGELKLAD 9
NGELK+ D
Sbjct: 417 NGELKIED 424


>sp|PUR7_PYRAB|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 RNGELKLAD 9
+NGE+ LAD
Sbjct: 178 KNGEIILAD 186


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RNGELKLAD 9
+NGELK+ +
Sbjct: 49 KNGELKIEE 57


>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 RNGELKLAD 9
+NGELK+ +
Sbjct: 49 KNGELKIEE 57


>sp|ARCS_HALVD|ARCHAEOSINE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 RNGELKLAD 9
R GEL+L+D
Sbjct: 15 RIGELRLSD 23


>sp|WECC_METM7|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 RNGELKLAD 9
+NGELK+ +
Sbjct: 49 KNGELKIEE 57


>sp|KPRS_SULAC|RIBOSE-PHOSPHATE pyrophosphokinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 NGELKLAD 9
+GE+K+AD
Sbjct: 136 DGEVKIAD 143


>sp|RPO1C_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus solfataricus (strain

Query: 3 GELKLADF 10
G LKL DF
Sbjct: 186 GRLKLGDF 193


>sp|G6PI_PYRAB|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 2 NGELKLAD 9
NGE+K+ D
Sbjct: 176 NGEVKVVD 183


>sp|Y325_METJA|UNCHARACTERIZED protein MJ0325|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NGELKLA 8
NGELK+A
Sbjct: 225 NGELKVA 231


>sp|SEPS_ARCFU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NGELKLADF 10
+GE+KL+D
Sbjct: 352 HGEIKLSDL 360


>sp|PUR7_METMA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RNGELKLAD 9
R GE+ LAD
Sbjct: 182 REGEIVLAD 190


>sp|G6PI_PYRFU|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NGELKLAD 9
NGE+K+ D
Sbjct: 176 NGEVKVVD 183


>sp|G6PI_PYRHO|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NGELKLAD 9
NGE+K+ D
Sbjct: 176 NGEVKVVD 183


>sp|DAPF_METJA|DIAMINOPIMELATE epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NGELKLAD 9
NGELKL +
Sbjct: 149 NGELKLKN 156




29|Sequence|141|150|KLADFGLARA

>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LADFGLA 8
LADFG+A
Sbjct: 100 LADFGIA 106


>sp|TAW22_NANEQ|TRNA (guanine(37)-N(1))/4-demethylwyosine(37)-methyltransferase

Query: 2 LADFGLA 8
LADFG+A
Sbjct: 152 LADFGIA 158


>sp|PURE_ARCFU|PHOSPHORIBOSYLAMINOIMIDAZOLE carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KLADFGL 7
KLADFG+
Sbjct: 48 KLADFGI 54


>sp|TRPD_PYRFU|ANTHRANILATE phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 DFGLAR 9
DFGLAR
Sbjct: 242 DFGLAR 247


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 1 KLADFGLA 8
KLAD G+A
Sbjct: 856 KLADMGVA 863


>sp|RL18_METMJ|LARGE ribosomal subunit protein uL18|Methanoculleus marisnigri (strain

Query: 4 DFGLARA 10
D GLARA
Sbjct: 104 DIGLARA 110




30|Sequence|146|155|GLARAFGIPV

>sp|RL10E_HALSA|LARGE ribosomal subunit protein uL16|Halobacterium salinarum (strain ATCC

Query: 1 GLARAFGIPV 10
G+ +AFG+PV
Sbjct: 114 GMRQAFGVPV 123


>sp|RL10E_HALS3|LARGE ribosomal subunit protein uL16|Halobacterium salinarum (strain ATCC

Query: 1 GLARAFGIPV 10
G+ +AFG+PV
Sbjct: 114 GMRQAFGVPV 123


>sp|Y2143_SULTO|UPF0284 protein STK_21430|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GLARAFGIPV 10
GLA+A GIP+
Sbjct: 274 GLAKAVGIPI 283


>sp|HIS1_THEON|ATP phosphoribosyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 LARAFGIPV 10
LARAF +PV
Sbjct: 44 LARAFDVPV 52


>sp|HIS1_PYRFU|ATP phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LARAFGIPV 10
LARAF +PV
Sbjct: 44 LARAFDVPV 52


>sp|HIS1_THEKO|ATP phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 LARAFGIPV 10
LARAF +PV
Sbjct: 42 LARAFDVPV 50


>sp|HIS1_THEGJ|ATP phosphoribosyltransferase|Thermococcus gammatolerans (strain DSM

Query: 2 LARAFGIPV 10
LARAF +PV
Sbjct: 44 LARAFDVPV 52


>sp|PGK2_PYRAB|2-PHOSPHOGLYCERATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 ARAFGIPV 10
AR FG+PV
Sbjct: 258 ARKFGVPV 265


>sp|DPDH_PYRIL|D-PROLINE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 ARAFGIPV 10
AR FGIPV
Sbjct: 224 ARKFGIPV 231


>sp|RADB_THEON|DNA repair and recombination protein|Thermococcus onnurineus (strain

Query: 2 LARAFGIPV 10
LAR GIPV
Sbjct: 141 LARKLGIPV 149


>sp|MFNA_PYRAB|PROBABLE L-aspartate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 2 LARAFGIPV 10
LAR +GIP+
Sbjct: 185 LAREYGIPL 193


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LARAFGIPV 10
L++AFG PV
Sbjct: 913 LSQAFGCPV 921


>sp|Y338_HYPBU|UPF0200 protein Hbut_0338|Hyperthermus butylicus (strain DSM 5456

Query: 2 LARAFGIPV 10
+AR+ GIPV
Sbjct: 25 IARSMGIPV 33


>sp|DNLI2_METBF|DNA ligase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 GLARAFGIPV 10
+A+AF +PV
Sbjct: 182 AIAKAFSVPV 191


>sp|RPIA_PICTO|RIBOSE-5-PHOSPHATE isomerase A|Picrophilus torridus (strain ATCC 700027

Query: 2 LARAFGIPV 10
L R+F IPV
Sbjct: 60 LCRSFNIPV 68


>sp|DADD_METM5|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C5 /

Query: 1 GLARAFGIPV 10
LAR F +P+
Sbjct: 193 ALAREFNVPI 202


>sp|MFNA_PYRFU|PROBABLE L-aspartate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LARAFGIPV 10
LAR +GIP+
Sbjct: 184 LARDYGIPL 192


>sp|IDI2_PYRNV|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 ARAFGIPV 10
A AFGIP+
Sbjct: 82 AEAFGIPI 89


>sp|G3P_THEKO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LARAFGIPV 10
LAR GIPV
Sbjct: 43 LARERGIPV 51


>sp|HEM1_METAR|GLUTAMYL-TRNA reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GLARAFGIPV 10
G ARA G+P+
Sbjct: 66 GFARAEGMPL 75


>sp|MFNA_PYRHO|L-ASPARTATE/L-GLUTAMATE decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LARAFGIPV 10
LAR +GIP+
Sbjct: 184 LARDYGIPL 192


>sp|RADB_METMJ|DNA repair and recombination protein|Methanoculleus marisnigri (strain

Query: 1 GLARAFGIPV 10
GLA+ + IPV
Sbjct: 147 GLAKKYDIPV 156


>sp|DNLI_METLZ|DNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GLARAFGIP 9
+++AFG+P
Sbjct: 174 AVSKAFGVP 182


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 2 LARAFGIPV 10
L FGIPV
Sbjct: 10 LTTGFGIPV 18


>sp|MDH_NATPD|MALATE dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 AFGIPV 10
AFG+PV
Sbjct: 261 AFGVPV 266


>sp|MDH_HALVD|MALATE dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 5 AFGIPV 10
AFG+PV
Sbjct: 261 AFGVPV 266


>sp|MDH_HALMA|MALATE dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 5 AFGIPV 10
AFG+PV
Sbjct: 261 AFGVPV 266


>sp|Y119_PYRCJ|UPF0215 protein Pcal_0119|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GLARAFGIPV 10
L R FG+PV
Sbjct: 78 ALWRRFGVPV 87


>sp|Y2029_AERPE|UPF0284 protein APE_2029.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 LARAFGIPV 10
+ARAF IP+
Sbjct: 90 VARAFNIPL 98


>sp|RFCL_THEAC|REPLICATION factor C large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 GLARAFGIPV 10
+A FG+PV
Sbjct: 59 AIAGTFGVPV 68


>sp|CCA_HALLT|CCA-ADDING enzyme|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 LARAFGIPV 10
LA AFG+P+
Sbjct: 446 LAPAFGVPL 454


>sp|Y096_METJA|UNCHARACTERIZED protein MJ0096|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ARAFGIPV 10
A+A+GIP+
Sbjct: 233 AKAYGIPL 240


>sp|Y1556_METMJ|UPF0200 protein Memar_1556|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LARAFGIPV 10
+AR GIPV
Sbjct: 20 IARDLGIPV 28


>sp|UPP_THESM|URACIL phosphoribosyltransferase|Thermococcus sibiricus (strain DSM 12597

Query: 4 RAFGIPV 10
RAFG P+
Sbjct: 214 RAFGAPI 220


>sp|IDI2_PYRIL|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 LARAFGIPV 10
+A FGIP+
Sbjct: 81 IAEEFGIPI 89


>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 GLARAFG 7
GLAR FG
Sbjct: 542 GLAREFG 548


>sp|LPLA_AERPE|PUTATIVE lipoate-protein ligase A|Aeropyrum pernix (strain ATCC 700893

Query: 3 ARAFGIPV 10
ARA G+PV
Sbjct: 58 ARAEGVPV 65


>sp|UPP_THEON|URACIL phosphoribosyltransferase|Thermococcus onnurineus (strain NA1)

Query: 4 RAFGIPV 10
RAFG P+
Sbjct: 214 RAFGAPI 220


>sp|MTRC_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain C7

Query: 5 AFGIPV 10
AFGIPV
Sbjct: 95 AFGIPV 100


>sp|AMPPA_THEON|AMP phosphorylase|Thermococcus onnurineus (strain NA1)

Query: 1 GLARAFGIP 9
G+ARA G P
Sbjct: 435 GIARAAGAP 443


>sp|AMPPA_THEGJ|AMP phosphorylase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GLARAFGIP 9
G+ARA G P
Sbjct: 435 GIARAAGAP 443


>sp|AROA_METPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaerula palustris (strain ATCC

Query: 5 AFGIPV 10
AFG+PV
Sbjct: 209 AFGVPV 214




31|Sequence|151|160|FGIPVRCYSA

>sp|Y119_PYRCJ|UPF0215 protein Pcal_0119|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FGIPVRCY 8
FG+PV CY
Sbjct: 83 FGVPVACY 90


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FGIPVRCYSA 10
FG PV YSA
Sbjct: 917 FGCPVEVYSA 926


>sp|RPO10_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo10|Halobacterium salinarum (strain

Query: 3 IPVRCYS 9
+PVRC+S
Sbjct: 3 VPVRCFS 9


>sp|RPO10_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo10|Halobacterium salinarum (strain

Query: 3 IPVRCYS 9
+PVRC+S
Sbjct: 3 VPVRCFS 9


>sp|RPO10_METAR|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanocella arvoryzae (strain DSM

Query: 3 IPVRCYS 9
IPVRC++
Sbjct: 2 IPVRCFT 8


>sp|RPO10_METMJ|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanoculleus marisnigri (strain

Query: 3 IPVRCYS 9
IPVRC++
Sbjct: 2 IPVRCFT 8


>sp|RPO10_HALLT|DNA-DIRECTED RNA polymerase subunit Rpo10|Halorubrum lacusprofundi (strain

Query: 3 IPVRCYS 9
IPVRC++
Sbjct: 3 IPVRCFT 9


>sp|RPO10_HALWD|DNA-DIRECTED RNA polymerase subunit Rpo10|Haloquadratum walsbyi (strain DSM

Query: 3 IPVRCYS 9
IPVRC++
Sbjct: 3 IPVRCFT 9


>sp|GGR_METVS|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GIPVRCYSA 10
G PVRC A
Sbjct: 43 GTPVRCAEA 51


>sp|GGR_METMP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GIPVRCYSA 10
G PVRC A
Sbjct: 43 GTPVRCAEA 51


>sp|GGR_METM7|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C7 /

Query: 2 GIPVRCYSA 10
G PVRC A
Sbjct: 43 GTPVRCAEA 51


>sp|GGR_METM6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C6 /

Query: 2 GIPVRCYSA 10
G PVRC A
Sbjct: 43 GTPVRCAEA 51


>sp|GGR_METM5|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C5 /

Query: 2 GIPVRCYSA 10
G PVRC A
Sbjct: 43 GTPVRCAEA 51


>sp|GGR_META3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GIPVRCYSA 10
G PVRC A
Sbjct: 44 GTPVRCAEA 52


>sp|RPO10_METPE|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanosphaerula palustris (strain

Query: 3 IPVRCYS 9
IPVRC++
Sbjct: 2 IPVRCFT 8


>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 1 FGIPVRCYS 9
G+P RC S
Sbjct: 384 LGVPARCAS 392


>sp|RPO10_METMA|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanosarcina mazei (strain ATCC

Query: 3 IPVRCYS 9
IPVRC+S
Sbjct: 2 IPVRCFS 8


>sp|RPO10_PICTO|DNA-DIRECTED RNA polymerase subunit Rpo10|Picrophilus torridus (strain ATCC

Query: 3 IPVRCYS 9
IPVRC+S
Sbjct: 3 IPVRCFS 9


>sp|RPO10_METBF|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanosarcina barkeri (strain

Query: 3 IPVRCYS 9
IPVRC+S
Sbjct: 2 IPVRCFS 8


>sp|RPO10_METAC|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanosarcina acetivorans (strain

Query: 3 IPVRCYS 9
IPVRC+S
Sbjct: 2 IPVRCFS 8


>sp|RPO10_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermoplasma volcanium (strain

Query: 3 IPVRCYS 9
IPVRC+S
Sbjct: 3 IPVRCFS 9


>sp|RPO10_METHJ|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanospirillum hungatei JF-1

Query: 3 IPVRCYS 9
IPVRC++
Sbjct: 2 IPVRCFT 8


>sp|RPO10_METB6|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanoregula boonei (strain DSM

Query: 3 IPVRCYS 9
IPVRC++
Sbjct: 2 IPVRCFT 8


>sp|RPO10_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermoplasma acidophilum (strain

Query: 3 IPVRCYS 9
IPVRC+S
Sbjct: 3 IPVRCFS 9


>sp|RPO10_METTP|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanothrix thermoacetophila

Query: 3 IPVRCYS 9
IPVRC+S
Sbjct: 2 IPVRCFS 8


>sp|RPO10_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo10|Haloarcula marismortui (strain

Query: 3 IPVRCYS 9
+PVRC++
Sbjct: 3 VPVRCFT 9


>sp|RPO10_METLZ|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanocorpusculum labreanum

Query: 3 IPVRCYS 9
IPVRC++
Sbjct: 2 IPVRCFT 8


>sp|MDH_HALMA|MALATE dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 1 FGIPVR 6
FG+PVR
Sbjct: 262 FGVPVR 267


>sp|RPO10_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrococcus horikoshii (strain ATCC

Query: 3 IPVRCYS 9
IPVRC++
Sbjct: 3 IPVRCFT 9


>sp|RPO10_METS5|DNA-DIRECTED RNA polymerase subunit Rpo10|Metallosphaera sedula (strain ATCC

Query: 3 IPVRCYS 9
IPVRC++
Sbjct: 3 IPVRCFT 9


>sp|RPO10_NATPD|DNA-DIRECTED RNA polymerase subunit Rpo10|Natronomonas pharaonis (strain

Query: 3 IPVRCYS 9
+PVRC++
Sbjct: 3 VPVRCFT 9


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 FGIPVRCYSA 10
FGI RC +A
Sbjct: 260 FGISERCIAA 269


>sp|RPO10_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum arsenaticum (strain

Query: 3 IPVRCYS 9
IPVRC++
Sbjct: 3 IPVRCFT 9


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 GIPVRC 7
G PVRC
Sbjct: 40 GTPVRC 45


>sp|GGR_ARCFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GIPVRC 7
G PVRC
Sbjct: 37 GTPVRC 42


>sp|GGR_METMJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GIPVRC 7
G PVRC
Sbjct: 40 GTPVRC 45


>sp|AROA_METPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 FGIPVR 6
FG+PVR
Sbjct: 210 FGVPVR 215


>sp|BIOF_METVS|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus vannielii (strain

Query: 1 FGIPVR 6
FG+P+R
Sbjct: 329 FGVPIR 334


>sp|RPO10_METBU|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanococcoides burtonii (strain

Query: 3 IPVRCYS 9
IPVRC++
Sbjct: 2 IPVRCFT 8


>sp|GGR_METLZ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GIPVRC 7
G PVRC
Sbjct: 40 GAPVRC 45


>sp|GGR_METHJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GIPVRC 7
G PVRC
Sbjct: 40 GAPVRC 45


>sp|RPO10_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum calidifontis (strain

Query: 3 IPVRCYS 9
IPVRC++
Sbjct: 3 IPVRCFT 9


>sp|RPO10_METMP|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanococcus maripaludis (strain

Query: 4 PVRCYS 9
P+RC+S
Sbjct: 4 PIRCFS 9


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 2 GIPVRCYSA 10
G PV YSA
Sbjct: 150 GTPVEVYSA 158


>sp|RPO10_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus solfataricus (strain

Query: 3 IPVRCYS 9
IP+RC++
Sbjct: 3 IPIRCFT 9


>sp|RPO10_METM6|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanococcus maripaludis (strain

Query: 4 PVRCYS 9
P+RC+S
Sbjct: 4 PIRCFS 9


>sp|RPO10_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrococcus furiosus (strain ATCC

Query: 3 IPVRCYS 9
+PVRC++
Sbjct: 3 VPVRCFT 9


>sp|RPO10_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrococcus abyssi (strain GE5 /

Query: 3 IPVRCYS 9
+PVRC++
Sbjct: 3 VPVRCFT 9


>sp|RPO10_METM7|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanococcus maripaludis (strain

Query: 4 PVRCYS 9
P+RC+S
Sbjct: 4 PIRCFS 9


>sp|GGR_METB6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoregula boonei (strain DSM 21154

Query: 2 GIPVRC 7
G PVRC
Sbjct: 40 GAPVRC 45


>sp|RPO10_METM5|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanococcus maripaludis (strain

Query: 4 PVRCYS 9
P+RC+S
Sbjct: 4 PIRCFS 9


>sp|SURE1_PYRAE|5'-NUCLEOTIDASE SurE 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FGIPVRCYSA 10
GIP YSA
Sbjct: 118 LGIPALAYSA 127


>sp|RPO10_THEON|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermococcus onnurineus (strain

Query: 3 IPVRCYS 9
+PVRC++
Sbjct: 3 VPVRCFT 9


>sp|RPO10_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo10|Sulfurisphaera tokodaii (strain

Query: 3 IPVRCYS 9
IP+RC++
Sbjct: 3 IPIRCFT 9


>sp|RPO10_METKA|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanopyrus kandleri (strain AV19

Query: 3 IPVRCYS 9
IP+RC++
Sbjct: 3 IPIRCFT 9


>sp|RPO10_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermococcus kodakarensis (strain

Query: 3 IPVRCYS 9
+PVRC++
Sbjct: 3 VPVRCFT 9


>sp|RPO10_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus shibatae (strain

Query: 3 IPVRCYS 9
IP+RC++
Sbjct: 3 IPIRCFT 9


>sp|RPO10_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 3 IPVRCYS 9
IP+RC++
Sbjct: 3 IPIRCFT 9


>sp|RPO10_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 3 IPVRCYS 9
IP+RC++
Sbjct: 3 IPIRCFT 9


>sp|RPO10_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 3 IPVRCYS 9
IP+RC++
Sbjct: 3 IPIRCFT 9


>sp|RPO10_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 3 IPVRCYS 9
IP+RC++
Sbjct: 3 IPIRCFT 9


>sp|RPO10_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 3 IPVRCYS 9
IP+RC++
Sbjct: 3 IPIRCFT 9


>sp|RPO10_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 3 IPVRCYS 9
IP+RC++
Sbjct: 3 IPIRCFT 9


>sp|RPO10_METJA|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanocaldococcus jannaschii

Query: 4 PVRCYS 9
P+RC+S
Sbjct: 4 PIRCFS 9


>sp|RPO10_PYRNV|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum neutrophilum (strain

Query: 3 IPVRCYS 9
IPVRC++
Sbjct: 3 IPVRCFT 9


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GIPVRCYSA 10
G PV YSA
Sbjct: 929 GCPVEIYSA 937


>sp|RPO10_METTH|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanothermobacter

Query: 3 IPVRCYS 9
IPVRC S
Sbjct: 2 IPVRCLS 8


>sp|RPO10_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum aerophilum (strain

Query: 3 IPVRCYS 9
IP+RC++
Sbjct: 3 IPIRCFT 9


>sp|RPO10_METVS|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanococcus vannielii (strain

Query: 4 PVRCYS 9
P+RC+S
Sbjct: 4 PIRCFS 9


>sp|RPO10_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo10|Sulfolobus acidocaldarius (strain

Query: 3 IPVRCYS 9
IP+RC++
Sbjct: 3 IPIRCFT 9


>sp|AROC_THEGJ|CHORISMATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FGIPVRCY 8
FGI VR Y
Sbjct: 144 FGIRVRAY 151


>sp|RPO10_PYRIL|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum islandicum (strain DSM

Query: 3 IPVRCYS 9
+P+RC++
Sbjct: 3 VPIRCFT 9


>sp|RPO10_NANEQ|DNA-DIRECTED RNA polymerase subunit Rpo10|Nanoarchaeum equitans (strain

Query: 4 PVRCYS 9
P+RC+S
Sbjct: 4 PIRCFS 9


>sp|RPO10_CALMQ|DNA-DIRECTED RNA polymerase subunit Rpo10|Caldivirga maquilingensis (strain

Query: 3 IPVRCYS 9
+P+RC++
Sbjct: 3 VPIRCWT 9


>sp|XYLF_SULAC|XYLOSE/ARABINOSE-BINDING protein XylF|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GIPVRCYSA 10
GIPV Y+A
Sbjct: 166 GIPVFAYNA 174


>sp|RPO10_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo10|Archaeoglobus fulgidus (strain ATCC

Query: 4 PVRCYS 9
P+RC+S
Sbjct: 13 PIRCFS 18




32|Sequence|156|165|RCYSAEVVTL

>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CYSAEVVT 9
C+ AEV+T
Sbjct: 299 CWDAEVLT 306


>sp|RIFK_HALWD|RIBOFLAVIN kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 CYSAEVV 8
CY AE++
Sbjct: 176 CYPAEII 182




33|Sequence|161|170|EVVTLWYRPP

>sp|FLAB2_ARCFU|PROBABLE flagellin 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVVTLWYRPP 10
+VVT+ RPP
Sbjct: 177 DVVTIEVRPP 186


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 VVTLWYR 8
VVTLW R
Sbjct: 350 VVTLWMR 356


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VVTLWYRPP 10
V +LW+R P
Sbjct: 183 VHSLWFRSP 191


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 3 VTLWYRP 9
+ +WY+P
Sbjct: 112 IIIWYKP 118


>sp|PT1_HALVD|PHOSPHOENOLPYRUVATE-PROTEIN phosphotransferase|Haloferax volcanii (strain ATCC 29605

Query: 5 LWYRP 9
+WYRP
Sbjct: 21 VWYRP 25




34|Sequence|166|175|WYRPPDVLFG

>sp|KTHY_HALSA|PROBABLE thymidylate kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 WYRPPDVLF 9
W RPPDV
Sbjct: 118 WTRPPDVTL 126


>sp|KTHY_HALS3|PROBABLE thymidylate kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 WYRPPDVLF 9
W RPPDV
Sbjct: 118 WTRPPDVTL 126


>sp|NPD_HALMA|NAD-DEPENDENT protein deacetylase|Haloarcula marismortui (strain ATCC 43049

Query: 2 YRPPDVLFG 10
YRP VLFG
Sbjct: 172 YRPDVVLFG 180


>sp|TRPB_PICTO|TRYPTOPHAN synthase beta chain|Picrophilus torridus (strain ATCC 700027

Query: 5 PDVLFG 10
PDVLFG
Sbjct: 256 PDVLFG 261


>sp|RADA_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 5 PDVLFG 10
PDVLFG
Sbjct: 266 PDVLFG 271


>sp|DNAG_STAMF|DNA primase DnaG|Staphylothermus marinus (strain ATCC 43588

Query: 2 YRPPDVL 8
Y+PP++L
Sbjct: 410 YKPPEIL 416


>sp|AROE_THEVO|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma volcanium (strain ATCC 51530

Query: 4 PPDVLFG 10
PPD +FG
Sbjct: 3 PPDYVFG 9


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 5 PDVLFG 10
PD+LFG
Sbjct: 143 PDILFG 148


>sp|HEM3_HYPBU|PROBABLE porphobilinogen deaminase|Hyperthermus butylicus (strain DSM 5456

Query: 1 WYRPPDVL 8
W PPD+L
Sbjct: 183 WRIPPDIL 190


>sp|RL15_STAMF|LARGE ribosomal subunit protein uL15|Staphylothermus marinus (strain

Query: 1 WY------RPPDVLFG 10
WY RPP+ ++G
Sbjct: 56 WYGKHGFTRPPETIYG 71


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 2 YRPPDV 7
Y PPDV
Sbjct: 258 YEPPDV 263


>sp|RRP4_KORCO|EXOSOME complex component Rrp4|Korarchaeum cryptofilum (strain OPF8)

Query: 1 WYRPPDV 7
W +PP V
Sbjct: 186 WVKPPSV 192


>sp|AROE_THEAC|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YRPPDVLF 9
Y PPD F
Sbjct: 209 YNPPDTPF 216


>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YRPPD 6
YRPPD
Sbjct: 363 YRPPD 367


>sp|RS2_ARCFU|SMALL ribosomal subunit protein uS2|Archaeoglobus fulgidus (strain ATCC

Query: 2 YRPPDVLF 9
YR P+V+F
Sbjct: 112 YREPEVVF 119


>sp|KTHY_HALMA|PROBABLE thymidylate kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 WYRPPD 6
W RPPD
Sbjct: 122 WTRPPD 127


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WYRPPD 6
WY PP+
Sbjct: 334 WYFPPN 339


>sp|PRIL_PYRAB|DNA primase large subunit PriL|Pyrococcus abyssi (strain GE5 /

Query: 1 WYRPPD 6
WY PP+
Sbjct: 333 WYFPPN 338


>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 1 WYRPPD 6
WY PP+
Sbjct: 334 WYFPPN 339


>sp|SYTE_AERPE|THREONINE--TRNA ligase editing subunit|Aeropyrum pernix (strain ATCC 700893

Query: 4 PPDVLFG 10
PP ++FG
Sbjct: 220 PPSIVFG 226


>sp|PRIL_THEKO|DNA primase large subunit PriL|Thermococcus kodakarensis (strain ATCC

Query: 1 WYRPPD 6
WY PP+
Sbjct: 350 WYFPPN 355


>sp|RRP4_METKA|EXOSOME complex component Rrp4|Methanopyrus kandleri (strain AV19 /

Query: 1 WYRPPDVL 8
+YRP DV+
Sbjct: 114 YYRPGDVI 121


>sp|RS2_HYPBU|SMALL ribosomal subunit protein uS2|Hyperthermus butylicus (strain DSM

Query: 1 WYRPPDVL 8
WY PDV+
Sbjct: 122 WYVEPDVI 129


>sp|GLNA_SACS2|GLUTAMINE synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YRPPD 6
YRPPD
Sbjct: 361 YRPPD 365


>sp|RS2_STAMF|SMALL ribosomal subunit protein uS2|Staphylothermus marinus (strain ATCC

Query: 1 WYRPPDVLF 9
WY PD++
Sbjct: 127 WYFEPDIVL 135


>sp|3MGH_AERPE|PUTATIVE 3-methyladenine DNA glycosylase|Aeropyrum pernix (strain ATCC

Query: 1 WYRPPDVL 8
+YR PDV+
Sbjct: 10 YYRQPDVV 17




35|Sequence|171|180|DVLFGAKLYS

>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 LFGAKLYS 10
++GAKLYS
Sbjct: 70 IYGAKLYS 77


>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LFGAKLYS 10
++GAKLYS
Sbjct: 70 IYGAKLYS 77


>sp|PSB_METSF|PROTEASOME subunit beta|Methanocaldococcus sp. (strain FS406-22)

Query: 1 DVLFGAKLYS 10
D+L GAKL+S
Sbjct: 111 DLLEGAKLFS 120


>sp|GGR_PYRHO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LFGAKLYS 10
++GAK+YS
Sbjct: 68 IYGAKIYS 75


>sp|PSB_METJA|PROTEASOME subunit beta|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVLFGAKLYS 10
D+L GAKL+S
Sbjct: 111 DLLEGAKLFS 120


>sp|GGR_PYRAB|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus abyssi (strain GE5 /

Query: 3 LFGAKLYS 10
++GAK+YS
Sbjct: 68 IYGAKIYS 75


>sp|DAPB_METKA|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanopyrus kandleri (strain AV19 /

Query: 1 DVLFGAK 7
DVLFG K
Sbjct: 264 DVLFGGK 270


>sp|PSB_METFA|PROTEASOME subunit beta|Methanocaldococcus fervens (strain DSM 4213

Query: 1 DVLFGAKLYS 10
D+L GAKL+S
Sbjct: 111 DLLEGAKLFS 120


>sp|Y912_METMA|UPF0288 protein MM_0912|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DVLFGA 6
DVLFGA
Sbjct: 125 DVLFGA 130


>sp|PSB_META3|PROTEASOME subunit beta|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DVLFGAKLYS 10
D + GAKL+S
Sbjct: 119 DTIHGAKLFS 128


>sp|ENDA_PYRAR|TRNA-SPLICING endonuclease|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DVLFGAKLYS 10
DV FG +LY
Sbjct: 14 DVEFGRRLYK 23


>sp|PSB_METM5|PROTEASOME subunit beta|Methanococcus maripaludis (strain C5 /

Query: 1 DVLFGAKLYS 10
D++ GAKL+S
Sbjct: 119 DLINGAKLFS 128


>sp|PSB_METM7|PROTEASOME subunit beta|Methanococcus maripaludis (strain C7 /

Query: 1 DVLFGAKLYS 10
D++ GAKL+S
Sbjct: 119 DLINGAKLFS 128


>sp|PSB_METM6|PROTEASOME subunit beta|Methanococcus maripaludis (strain C6 /

Query: 1 DVLFGAKLYS 10
D++ GAKL+S
Sbjct: 119 DLINGAKLFS 128


>sp|PSB_METMP|PROTEASOME subunit beta|Methanococcus maripaludis (strain DSM 14266

Query: 1 DVLFGAKLYS 10
D++ GAKL+S
Sbjct: 119 DLINGAKLFS 128


>sp|XPB1_SULTO|DNA 3'-5' helicase/translocase StoXPB1|Sulfurisphaera tokodaii (strain

Query: 1 DVLFGAKLYS 10
D+ FG +YS
Sbjct: 527 DITFGLDIYS 536


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LFGAKLYS 10
++GA++YS
Sbjct: 68 IYGARIYS 75




36|Sequence|176|185|AKLYSTSIDM

***** No hits found ******


37|Sequence|181|190|TSIDMWSAGC

>sp|CHER_HALS3|CHEMOTAXIS protein methyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 SIDMWSAGC 10
SID+WSA C
Sbjct: 95 SIDIWSAAC 103


>sp|THSB_AERPE|THERMOSOME subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 3 IDMWSAG 9
+DMWS G
Sbjct: 495 VDMWSRG 501


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 4 DMWSAG 9
DMWS G
Sbjct: 189 DMWSGG 194


>sp|KORB_ARCFU|2-OXOGLUTARATE synthase subunit KorB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 MWSAGC 10
+W AGC
Sbjct: 17 IWCAGC 22


>sp|MNTP_METB6|MANGANESE exporter MntP|Methanoregula boonei (strain DSM 21154

Query: 1 TSIDMWSAG 9
TSID ++AG
Sbjct: 112 TSIDAFAAG 120




38|Sequence|186|195|WSAGCIFAEL

>sp|PATS_METJA|SOLUBLE P-type ATPase-like phosphatase|Methanocaldococcus jannaschii

Query: 2 SAGCIFAEL 10
+AGC+F E+
Sbjct: 135 TAGCLFKEV 143


>sp|COFC_HALVD|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 3 AGCIFAEL 10
AGC FAE+
Sbjct: 148 AGCSFAEV 155


>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 2 SAGCIFAEL 10
+ GCIF+E
Sbjct: 170 AKGCIFSEF 178


>sp|PNCB_METAC|NICOTINATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 4 GCIFAEL 10
GC+FAE
Sbjct: 173 GCLFAEF 179


>sp|THSA_THEAC|THERMOSOME subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WSAGCIFAEL 10
W G + AEL
Sbjct: 406 WGGGAVEAEL 415




39|Sequence|191|200|IFAELANAGR

>sp|RS4E_ARCFU|SMALL ribosomal subunit protein eS4|Archaeoglobus fulgidus (strain ATCC

Query: 2 FAELANAGR 10
F ELA+ GR
Sbjct: 47 FLELADTGR 55




40|Sequence|196|205|ANAGRPLFPG

>sp|GMS_METOI|GMGT synthase|Methanothermococcus okinawensis (strain DSM 14208

Query: 1 ANAGRPL 7
ANAG+PL
Sbjct: 132 ANAGKPL 138


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 AGRPLFPG 10
GRPLF G
Sbjct: 334 GGRPLFAG 341


>sp|CBIA_PICTO|COBYRINATE a,c-diamide synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 NAGRPLF 8
N+GRP+F
Sbjct: 320 NSGRPVF 326


>sp|RS8_NANEQ|SMALL ribosomal subunit protein uS8|Nanoarchaeum equitans (strain

Query: 1 ANAGRPLFP 9
ANA +P FP
Sbjct: 71 ANAIKPRFP 79


>sp|MAP2_METTH|METHIONINE aminopeptidase|Methanothermobacter thermautotrophicus (strain

Query: 3 AGRPLFP 9
GRP FP
Sbjct: 47 GGRPAFP 53


>sp|RRP4_SULAC|EXOSOME complex component Rrp4|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 GRPLFPG 10
GRP+ PG
Sbjct: 106 GRPISPG 112


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 AGRPLF 8
AGRP+F
Sbjct: 340 AGRPIF 345


>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 NAGRPLFPG 10
+AG P PG
Sbjct: 404 DAGEPYIPG 412


>sp|RRP4_SULTO|EXOSOME complex component Rrp4|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GRPLFPG 10
GRP+ PG
Sbjct: 104 GRPVSPG 110


>sp|HIS5_HALMA|IMIDAZOLE glycerol phosphate synthase subunit|Haloarcula marismortui

Query: 1 ANAGRPLF 8
A AG+PLF
Sbjct: 75 AEAGKPLF 82


>sp|NDK_METMA|NUCLEOSIDE diphosphate kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NAGRPLFP 9
+A RP FP
Sbjct: 52 HAARPFFP 59


>sp|NDK_METAC|NUCLEOSIDE diphosphate kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 NAGRPLFP 9
+A RP FP
Sbjct: 52 HAARPFFP 59


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GRPLFPG 10
G P+FPG
Sbjct: 142 GGPMFPG 148


>sp|COBS_METMA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ANAGRPLFPG 10
A AG+ +FPG
Sbjct: 52 AYAGQLVFPG 61




41|Sequence|201|210|PLFPGNDVDD

>sp|GLYA_METS3|SERINE hydroxymethyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 LFPGNDVDD 10
L PG++VDD
Sbjct: 344 LLPGDNVDD 352


>sp|HEM1_SACS2|GLUTAMYL-TRNA reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PLFPGNDV 8
PLF GN+V
Sbjct: 271 PLFTGNNV 278


>sp|HEM1_SACI7|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PLFPGNDV 8
PLF GN+V
Sbjct: 271 PLFTGNNV 278


>sp|HEM1_SACI6|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PLFPGNDV 8
PLF GN+V
Sbjct: 271 PLFTGNNV 278


>sp|HEM1_SACI4|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PLFPGNDV 8
PLF GN+V
Sbjct: 271 PLFTGNNV 278


>sp|HEM1_SACI3|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PLFPGNDV 8
PLF GN+V
Sbjct: 271 PLFTGNNV 278


>sp|HEM1_SACI2|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PLFPGNDV 8
PLF GN+V
Sbjct: 271 PLFTGNNV 278


>sp|HEM1_SACI1|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PLFPGNDV 8
PLF GN+V
Sbjct: 271 PLFTGNNV 278


>sp|Y2105_SACS2|UNCHARACTERIZED protein SSO2105|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PLFPGNDVDD 10
PLF G VD+
Sbjct: 55 PLFDGKSVDE 64


>sp|Y1588_METJA|UNCHARACTERIZED protein MJ1588|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LFPGNDVDD 10
LF GN DD
Sbjct: 8 LFEGNSADD 16


>sp|SFSA_METTH|SUGAR fermentation stimulation protein homolog|Methanothermobacter

Query: 2 LFPGNDV 8
L PGNDV
Sbjct: 47 LIPGNDV 53


>sp|Y037_METJA|UNCHARACTERIZED protein MJ0037|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PLFPGNDV 8
PL PGND+
Sbjct: 187 PLSPGNDL 194


>sp|OTC_PYRCJ|ORNITHINE carbamoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PLFPGNDV 8
PLFPG V
Sbjct: 37 PLFPGRIV 44


>sp|OTC_PYRAE|ORNITHINE carbamoyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PLFPG 5
PLFPG
Sbjct: 37 PLFPG 41


>sp|NADE_THEKO|NH(3)-DEPENDENT NAD(+) synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PLFPGNDVDD 10
P + NDV+D
Sbjct: 61 PYYENNDVED 70


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 PLFPGND 7
P+FPG D
Sbjct: 452 PMFPGYD 458


>sp|DTDA_METLZ|D-AMINOACYL-TRNA deacylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PLFPGNDV 8
PLF GN+V
Sbjct: 34 PLFDGNEV 41


>sp|Y689_ARCFU|UNCHARACTERIZED protein AF_0689|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LFPGNDV 8
L+PG DV
Sbjct: 15 LYPGEDV 21


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 3 FPGNDVDD 10
FPG D+D+
Sbjct: 375 FPGLDLDE 382


>sp|F16PA_NATPD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PLFPGND 7
PLF GND
Sbjct: 266 PLFVGND 272


>sp|GFPS_NATPD|GERANYLFARNESYL diphosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PLFPGNDVD 9
P PG++VD
Sbjct: 75 PSLPGDEVD 83


>sp|CSG_METAC|MAJOR S-layer protein|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PLFPGNDVDD 10
P++ G+D+DD
Sbjct: 33 PVYNGSDIDD 42


>sp|Y1506_METJA|UNCHARACTERIZED protein MJ1506|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LFPGNDVD 9
+ PG+DVD
Sbjct: 75 IHPGDDVD 82


>sp|Y516_METST|UPF0173 metal-dependent hydrolase Msp_0516|Methanosphaera stadtmanae

Query: 1 PLFPGND 7
PL PG D
Sbjct: 224 PLMPGED 230


>sp|Y1350_METJA|UNCHARACTERIZED protein MJ1350|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PGNDVDD 10
PGN +DD
Sbjct: 87 PGNTMDD 93


>sp|NIFK_METMI|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 3 FPGNDVDD 10
F GNDV D
Sbjct: 290 FTGNDVTD 297


>sp|NIFK_METMP|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 3 FPGNDVDD 10
F GNDV D
Sbjct: 290 FTGNDVTD 297


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LFPGNDVD 9
+ PG+DVD
Sbjct: 34 IHPGDDVD 41




42|Sequence|206|215|NDVDDQLKRI

>sp|RL3_PYRAE|LARGE ribosomal subunit protein uL3|Pyrobaculum aerophilum (strain ATCC

Query: 2 DVDDQLKRI 10
DVD QLK++
Sbjct: 125 DVDKQLKKV 133


>sp|RL10_METBF|LARGE ribosomal subunit protein uL10|Methanosarcina barkeri (strain

Query: 1 NDVDDQLKRI 10
N VDDQL+ +
Sbjct: 290 NAVDDQLREV 299


>sp|RL3_PYRNV|LARGE ribosomal subunit protein uL3|Pyrobaculum neutrophilum (strain DSM

Query: 2 DVDDQLKRI 10
DVD Q+K++
Sbjct: 125 DVDKQMKKV 133


>sp|RL3_PYRIL|LARGE ribosomal subunit protein uL3|Pyrobaculum islandicum (strain DSM

Query: 2 DVDDQLKRI 10
DVD Q+K++
Sbjct: 129 DVDKQMKKV 137


>sp|GLYA_KORCO|SERINE hydroxymethyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 DVDDQLKRI 10
DVD +KRI
Sbjct: 160 DVDKSIKRI 168


>sp|RL3_PYRAR|LARGE ribosomal subunit protein uL3|Pyrobaculum arsenaticum (strain DSM

Query: 2 DVDDQLKRI 10
DVD Q+K++
Sbjct: 125 DVDKQMKQV 133


>sp|TPIS_METS5|TRIOSEPHOSPHATE isomerase|Metallosphaera sedula (strain ATCC 51363

Query: 1 NDVDDQLKRI 10
+++DD LKR+
Sbjct: 101 DEMDDALKRM 110


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 NDVDDQLKRI 10
N VD++LKR+
Sbjct: 924 NFVDEELKRL 933


>sp|NIFB_METIM|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus infernus

Query: 2 DVDDQLKRI 10
DV+D LK+I
Sbjct: 67 DVEDYLKKI 75


>sp|TPIS_SACS2|TRIOSEPHOSPHATE isomerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NDVDDQLKR 9
+++DD LKR
Sbjct: 101 DEIDDVLKR 109


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri (strain

Query: 2 DVDDQL 7
DVDDQL
Sbjct: 77 DVDDQL 82


>sp|Y1619_METKA|DNA-BINDING protein MK1619|Methanopyrus kandleri (strain AV19 /

Query: 4 DDQLKRI 10
+DQLKRI
Sbjct: 92 EDQLKRI 98


>sp|PCNA2_SACS2|DNA polymerase sliding clamp 2|Saccharolobus solfataricus (strain

Query: 2 DVDDQLKRI 10
DV+D LKR+
Sbjct: 74 DVNDILKRV 82


>sp|TRUD2_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii (strain

Query: 3 VDDQLKRI 10
VDD+LK+I
Sbjct: 258 VDDRLKKI 265


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 NDVDDQLKRI 10
N++ D+++RI
Sbjct: 119 NEIKDRIRRI 128




43|Sequence|211|220|QLKRIFRLLG

>sp|RS5_NANEQ|SMALL ribosomal subunit protein uS5|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 QLKRIFRLLG 10
++K+IFRL G
Sbjct: 170 EIKKIFRLAG 179


>sp|RBL_METJA|RIBULOSE bisphosphate carboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LKRIFRLLG 10
L +I+RLLG
Sbjct: 289 LAKIYRLLG 297


>sp|PSB_METKA|PROTEASOME subunit beta|Methanopyrus kandleri (strain AV19 /

Query: 1 QLKRIFRL 8
Q+K+IFR+
Sbjct: 40 QVKKIFRI 47


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 1 QLKRIFRLLG 10
+LK+I RL+G
Sbjct: 470 ELKQIVRLVG 479


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 RIFRLLG 10
R++RLLG
Sbjct: 805 RVYRLLG 811


>sp|Y1460_METJA|UNCHARACTERIZED protein MJ1460|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QLKRIFRLL 9
+LK+IF+L+
Sbjct: 70 ELKKIFKLM 78


>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 KRIFRLLG 10
KRI++L+G
Sbjct: 231 KRIYKLVG 238


>sp|TFE_AERPE|TRANSCRIPTION factor E|Aeropyrum pernix (strain ATCC 700893

Query: 2 LKRIFRLLG 10
++RI RLLG
Sbjct: 63 IRRILRLLG 71


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 QLKRIFRLLG 10
+LK I RL+G
Sbjct: 478 ELKEIVRLVG 487


>sp|PUS10_CALMQ|TRNA pseudouridine synthase Pus10|Caldivirga maquilingensis (strain ATCC

Query: 1 QLKRIFRLL 9
+L+R+FR+L
Sbjct: 298 ELRRVFRIL 306


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QLKRIFRLLG 10
++K IF+L+G
Sbjct: 971 KVKEIFKLVG 980




44|Sequence|216|225|FRLLGTPTEE

>sp|RS13_THEPD|SMALL ribosomal subunit protein uS13|Thermofilum pendens (strain DSM

Query: 1 FRLLGTPTEE 10
+RLLGT +EE
Sbjct: 49 YRLLGTLSEE 58


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LLGTPTEE 10
LLGTP EE
Sbjct: 992 LLGTPEEE 999


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 1 FRLLGTPTE 9
R+LGTP E
Sbjct: 113 IRVLGTPIE 121


Query: 2 RLLGTP 7
RLLGTP
Sbjct: 662 RLLGTP 667


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 2 RLLGTPTE 9
R+LGTP E
Sbjct: 645 RILGTPHE 652


>sp|GSA_HALSA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LLGTPTE 9
L GTPTE
Sbjct: 85 LFGTPTE 91


>sp|GSA_HALS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 29341

Query: 3 LLGTPTE 9
L GTPTE
Sbjct: 85 LFGTPTE 91


>sp|THIM_METBF|HYDROXYETHYLTHIAZOLE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 4 LGTPTEE 10
+GTPT E
Sbjct: 61 IGTPTSE 67


>sp|AROA_AERPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FRLLGTP 7
FRL GTP
Sbjct: 218 FRLRGTP 224


>sp|Y1845_ARCFU|UNCHARACTERIZED protein AF_1845|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RLLGTPTE 9
+L+G PTE
Sbjct: 48 QLIGVPTE 55


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RLLGTPTE 9
R LGTP E
Sbjct: 908 RTLGTPIE 915


>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FRLLGTPTEE 10
F+ G PT+E
Sbjct: 180 FKFSGDPTQE 189




45|Sequence|221|230|TPTEEQWPSM

>sp|PANB_NITMS|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 PTEEQWPSM 10
P EE W SM
Sbjct: 257 PAEENWFSM 265


>sp|SUCC_STAMF|SUCCINATE--COA ligase [ADP-forming] subunit beta|Staphylothermus marinus (strain

Query: 4 EEQWPSM 10
+E WPSM
Sbjct: 163 KELWPSM 169


>sp|GCH3_SACI7|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 TPTEEQW 7
TP E QW
Sbjct: 92 TPLEAQW 98


>sp|GCH3_SACI6|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.4 /

Query: 1 TPTEEQW 7
TP E QW
Sbjct: 92 TPLEAQW 98


>sp|GCH3_SACI4|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.14.25 /

Query: 1 TPTEEQW 7
TP E QW
Sbjct: 92 TPLEAQW 98


>sp|GCH3_SACI3|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.27)

Query: 1 TPTEEQW 7
TP E QW
Sbjct: 92 TPLEAQW 98


>sp|GCH3_SACI2|GTP cyclohydrolase III|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 TPTEEQW 7
TP E QW
Sbjct: 92 TPLEAQW 98


>sp|GCH3_SACI1|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 TPTEEQW 7
TP E QW
Sbjct: 92 TPLEAQW 98


>sp|GCH3_SACS2|GTP cyclohydrolase III|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TPTEEQW 7
TP E QW
Sbjct: 92 TPLEAQW 98


>sp|TRM1_PYRHO|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus horikoshii

Query: 1 TPTEEQW 7
TP EE W
Sbjct: 72 TPAEEVW 78


>sp|ENDA_THEAC|TRNA-SPLICING endonuclease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PTEEQWPSM 10
P EE+W S+
Sbjct: 245 PEEERWYSI 253


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 1 TPTEEQW 7
TP EE W
Sbjct: 69 TPAEEVW 75


>sp|MTRA2_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanobrevibacter ruminantium

Query: 2 PTEEQWP 8
PT E WP
Sbjct: 6 PTAENWP 12


>sp|TRM1_PYRAB|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus abyssi (strain

Query: 1 TPTEEQW 7
TP EE W
Sbjct: 69 TPAEEIW 75


>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 1 TPTEEQWPS 9
TP+ + WP+
Sbjct: 117 TPSLDDWPT 125


>sp|TRM1_PYRFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus furiosus

Query: 1 TPTEEQW 7
TP EE W
Sbjct: 71 TPAEEIW 77


>sp|RL14_KORCO|LARGE ribosomal subunit protein uL14|Korarchaeum cryptofilum (strain

Query: 5 EQWPSM 10
E+WPS+
Sbjct: 128 ERWPSL 133




46|Sequence|226|235|QWPSMTKLPD

>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 WPSMTKLPD 10
WP T +P+
Sbjct: 50 WPDFTGMPE 58


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 2 WPSMTKLPD 10
WP T PD
Sbjct: 284 WPGTTVYPD 292


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 2 WPSMTKLPD 10
WP T PD
Sbjct: 284 WPGTTVYPD 292


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WPSMTKLPD 10
W S+T LPD
Sbjct: 274 WGSVTLLPD 282


>sp|RIFK_HALWD|RIBOFLAVIN kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 QWPSMTK 7
QW S+TK
Sbjct: 69 QWVSLTK 75




47|Sequence|231|240|TKLPDYKPYP

>sp|FEN_METHJ|FLAP endonuclease 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 KLPDYKPYP 10
KLPD+ P P
Sbjct: 264 KLPDFDPEP 272


>sp|FEN_METPE|FLAP endonuclease 1|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 KLPDYKPYP 10
KLPD+ P P
Sbjct: 264 KLPDFDPSP 272


>sp|KAD6_METBF|PUTATIVE adenylate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KLPDYKP 8
+LP+YKP
Sbjct: 166 ELPEYKP 172


>sp|CBID_ARCFU|COBALT-PRECORRIN-5B C(1)-methyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KLPDYKPY 9
K P+Y+P+
Sbjct: 226 KFPEYQPF 233


>sp|MPTA_METKA|GTP cyclohydrolase MptA|Methanopyrus kandleri (strain AV19 /

Query: 1 TKLPDYKPY 9
TKLP +PY
Sbjct: 125 TKLPTQEPY 133


>sp|SYFA_THEON|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus onnurineus (strain NA1)

Query: 3 LPDYKPY 9
LPDY P+
Sbjct: 417 LPDYYPF 423


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TKLPDYKPY 9
K+P Y+PY
Sbjct: 339 AKMPQYRPY 347


>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 3 LPDYKPY 9
LPDY P+
Sbjct: 420 LPDYYPF 426


>sp|FEN_METMJ|FLAP endonuclease 1|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 KLPDYKPYP 10
K PD+ P P
Sbjct: 264 KQPDFNPAP 272


>sp|HEM1_METVS|GLUTAMYL-TRNA reductase|Methanococcus vannielii (strain ATCC 35089

Query: 5 DYKPYP 10
DYK YP
Sbjct: 7 DYKKYP 12


>sp|HEM1_METMP|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain DSM 14266

Query: 5 DYKPYP 10
DYK YP
Sbjct: 7 DYKKYP 12


>sp|HEM1_METM7|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C7 /

Query: 5 DYKPYP 10
DYK YP
Sbjct: 7 DYKKYP 12


>sp|HEM1_METM6|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C6 /

Query: 5 DYKPYP 10
DYK YP
Sbjct: 7 DYKKYP 12


>sp|HEM1_METM5|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C5 /

Query: 5 DYKPYP 10
DYK YP
Sbjct: 7 DYKKYP 12


>sp|SYFA_THEKO|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LPDYKPY 9
LPDY P+
Sbjct: 418 LPDYYPF 424


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TKLPDYKPYP 10
++P+Y+PY
Sbjct: 712 ARIPEYRPYA 721


>sp|CAS1C_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LPDYKPYP 10
LPD KP P
Sbjct: 5 LPDIKPIP 12


>sp|ASNH2_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing] 2|Methanocaldococcus

Query: 2 KLPDYKP 8
+LPDYKP
Sbjct: 240 ELPDYKP 246


>sp|UPPS_PICTO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Picrophilus torridus

Query: 1 TKLPDY 6
+KLPDY
Sbjct: 124 SKLPDY 129


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 3 LPDYKPY 9
LPDY P+
Sbjct: 416 LPDYYPF 422


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 TKLPDYKPY 9
+++P Y+PY
Sbjct: 339 SRMPQYRPY 347


>sp|FEOB_METJA|FE(2+) transporter FeoB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KLPDYKPY 9
K P+++PY
Sbjct: 172 KYPNFEPY 179


>sp|TAW22_PYRAB|TRNA (guanine(37)-N(1))/4-demethylwyosine(37)-methyltransferase

Query: 2 KLPDYKPY 9
K+ DYKP+
Sbjct: 314 KVSDYKPH 321


>sp|GUAAB_PICTO|GMP synthase [glutamine-hydrolyzing] subunit B|Picrophilus torridus

Query: 3 LPDYKPYP 10
LP+ +P+P
Sbjct: 179 LPEVQPFP 186


>sp|Y596_METJA|UNCHARACTERIZED protein MJ0596|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KLPDYKPY 9
K+P+Y P+
Sbjct: 45 KIPEYLPF 52


>sp|PIMT_METAR|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 3 LPDYKPY 9
LPD+ PY
Sbjct: 113 LPDFAPY 119




48|Sequence|236|245|YKPYPMYPAT

>sp|GSA1_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 1|Cenarchaeum symbiosum (strain A)

Query: 1 YKPYPMYPAT 10
Y PYP + A+
Sbjct: 25 YAPYPFFAAS 34


>sp|GSA_METMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KPYPMYPAT 10
KPYP Y A+
Sbjct: 33 KPYPFYTAS 41


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 YKPYPMY 7
YKPYP +
Sbjct: 28 YKPYPFF 34


>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KPYPMY 7
KPYP Y
Sbjct: 26 KPYPFY 31


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KPYPMYP 8
KPYP+ P
Sbjct: 82 KPYPVVP 88


>sp|GSA_METBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcoides burtonii (strain DSM 6242

Query: 2 KPYPMY 7
KPYP Y
Sbjct: 30 KPYPFY 35


>sp|GSA_SULAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KPYPMY 7
KPYP Y
Sbjct: 26 KPYPFY 31


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KPYPMY 7
KPYP Y
Sbjct: 28 KPYPFY 33


>sp|GSA_ARCFU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YKPYPMYPA 9
+KP+P Y A
Sbjct: 28 FKPHPFYTA 36


>sp|GSA_AERPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Aeropyrum pernix (strain ATCC 700893

Query: 2 KPYPMY 7
KPYP Y
Sbjct: 31 KPYPFY 36


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YKPYPMY 7
+KPYP +
Sbjct: 30 FKPYPFF 36


>sp|APGM_METKA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 YKPYPMYPA 9
Y P+ +YP
Sbjct: 73 YDPFEVYPG 81


>sp|GSA_METAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KPYPMYPAT 10
KPYP Y A+
Sbjct: 33 KPYPFYTAS 41


>sp|GSA_METBF|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KPYPMYPAT 10
KPYP Y A+
Sbjct: 33 KPYPFYTAS 41


>sp|GSA_METMJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 KPYPMY 7
KPYP Y
Sbjct: 26 KPYPFY 31


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PYPMYPA 9
PYP++PA
Sbjct: 226 PYPLWPA 232


>sp|Y106_METJA|UNCHARACTERIZED protein MJ0106|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KPYPMY 7
K YPMY
Sbjct: 232 KEYPMY 237


>sp|GSA_METLZ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 KPYPMY 7
KPYP Y
Sbjct: 26 KPYPFY 31


>sp|GLYA_METHJ|SERINE hydroxymethyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 4 YPMYP 8
YP+YP
Sbjct: 407 YPLYP 411


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 1 YKPYPMY 7
+ PYP Y
Sbjct: 32 FDPYPFY 38


>sp|HIS8_METLZ|HISTIDINOL-PHOSPHATE aminotransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 PYPMYPA 9
P+P+YP+
Sbjct: 283 PFPVYPS 289


>sp|GSA_METB6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoregula boonei (strain DSM 21154

Query: 2 KPYPMYPA 9
KPYP Y A
Sbjct: 26 KPYPFYTA 33


>sp|GSA_METTP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 KPYPMY 7
+PYP Y
Sbjct: 39 RPYPFY 44


>sp|LYSY_PYRAB|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 YPMYPA 9
YP+YP
Sbjct: 325 YPLYPG 330


>sp|LYSY_PYRHO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 YPMYP 8
YP+YP
Sbjct: 325 YPLYP 329


>sp|GSA_METPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 PYPMYPA 9
PYP Y A
Sbjct: 29 PYPFYTA 35




49|Sequence|241|250|MYPATTSLVN

>sp|ASSY_HALWD|ARGININOSUCCINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 YPATTSLVN 10
+PA T+L+N
Sbjct: 268 HPAATTLLN 276


>sp|FLUC1_HALSA|FLUORIDE-SPECIFIC ion channel FluC 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 YPATTSLVN 10
YPA T +VN
Sbjct: 35 YPAGTLVVN 43




50|Sequence|246|255|TSLVNVVPKL

>sp|GATE_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 2 SLVNVVPKL 10
+LVN +P+L
Sbjct: 511 TLVNTIPRL 519


>sp|GATE_DESA1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Desulfurococcus amylolyticus (strain DSM

Query: 1 TSLVNVVPKL 10
++LVN++P L
Sbjct: 509 STLVNIIPSL 518


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 SLVNVVPKL 10
SL+N +PK+
Sbjct: 425 SLINEIPKI 433


>sp|RPO3_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma volcanium (strain ATCC

Query: 2 SLVNVVPKL 10
+L+N +PKL
Sbjct: 31 TLINDIPKL 39


>sp|RPO3_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma acidophilum (strain ATCC

Query: 2 SLVNVVPKL 10
+L+N +PKL
Sbjct: 31 TLINDIPKL 39


>sp|RPO3_PICTO|DNA-DIRECTED RNA polymerase subunit Rpo3|Picrophilus torridus (strain ATCC

Query: 2 SLVNVVPKL 10
+L+N +PKL
Sbjct: 30 TLINDIPKL 38


>sp|Y1337_METJA|UNCHARACTERIZED protein MJ1337|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TSLVNVVPK 9
T ++N +PK
Sbjct: 216 TEIINAIPK 224




51|Sequence|251|260|VVPKLNATGR

>sp|AATD_METM7|A-TYPE ATP synthase subunit D|Methanococcus maripaludis (strain C7 /

Query: 1 VVPKLNATGR 10
V+PK+NAT +
Sbjct: 173 VIPKMNATKK 182


>sp|AATD_METM6|A-TYPE ATP synthase subunit D|Methanococcus maripaludis (strain C6 /

Query: 1 VVPKLNATGR 10
V+PK+NAT +
Sbjct: 173 VIPKMNATKK 182


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 3 PKLNATGR 10
P LNATG+
Sbjct: 453 PDLNATGK 460


>sp|AATD_METMA|A-TYPE ATP synthase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VVPKLNATG 9
VVPK+++TG
Sbjct: 102 VVPKISSTG 110


>sp|AATD_METAC|A-TYPE ATP synthase subunit D|Methanosarcina acetivorans (strain ATCC

Query: 1 VVPKLNATG 9
VVPK+++TG
Sbjct: 102 VVPKISSTG 110


>sp|AATD_METMP|A-TYPE ATP synthase subunit D|Methanococcus maripaludis (strain DSM 14266

Query: 1 VVPKLNATGR 10
V+PK+N T +
Sbjct: 173 VIPKMNETKK 182


>sp|AGLB2_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VVPKLNAT 8
+VPK+NA+
Sbjct: 728 IVPKVNAS 735


>sp|AATD_METM5|A-TYPE ATP synthase subunit D|Methanococcus maripaludis (strain C5 /

Query: 1 VVPKLNATGR 10
V+PK+N T +
Sbjct: 173 VIPKMNETKK 182




52|Sequence|256|265|NATGRDLLQN

>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 TGRDLLQN 10
TGRDL+QN
Sbjct: 575 TGRDLIQN 582


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 TGRDLLQN 10
+GRDL+QN
Sbjct: 584 SGRDLIQN 591


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 TGRDLLQN 10
+GRDL+QN
Sbjct: 583 SGRDLVQN 590


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 3 TGRDLLQN 10
+GRDL+QN
Sbjct: 579 SGRDLVQN 586


>sp|HIS1_ARCFU|ATP phosphoribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 3 TGRDLLQN 10
TG D+LQN
Sbjct: 20 TGEDILQN 27


>sp|DKFP_METJA|FRUCTOSE-BISPHOSPHATE aldolase/6-deoxy-5-ketofructose 1-phosphate

Query: 1 NATGRDLLQ 9
NATGR++ Q
Sbjct: 267 NATGRNIHQ 275


>sp|RL13_NANEQ|LARGE ribosomal subunit protein uL13|Nanoarchaeum equitans (strain

Query: 2 ATGRDLLQN 10
A GR+LL+N
Sbjct: 90 ARGRELLKN 98


>sp|TRPG_METTM|ANTHRANILATE synthase component 2|Methanothermobacter marburgensis (strain ATCC

Query: 4 GRDLLQN 10
GRD+L+N
Sbjct: 186 GRDILEN 192


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 1 NATGRDLL 8
NATGRD L
Sbjct: 201 NATGRDGL 208


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 1 NATGRDLL 8
NATGRD L
Sbjct: 203 NATGRDGL 210


>sp|PURL_HALSA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 700922

Query: 1 NATGRDLL 8
NATGRD L
Sbjct: 197 NATGRDGL 204


>sp|PURL_HALS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 29341

Query: 1 NATGRDLL 8
NATGRD L
Sbjct: 197 NATGRDGL 204


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 1 NATGRDLL 8
NATGRD L
Sbjct: 211 NATGRDGL 218


>sp|Y597_METJA|UNCHARACTERIZED protein MJ0597|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ATGRDLL 8
ATGR+LL
Sbjct: 291 ATGRELL 297


>sp|THSA_SACSH|CHAPERONIN subunit alpha|Saccharolobus shibatae (strain ATCC 51178

Query: 3 TGRDLLQN 10
TGRD L+N
Sbjct: 16 TGRDALRN 23


>sp|THSA_SACS2|CHAPERONIN subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 TGRDLLQN 10
TGRD L+N
Sbjct: 16 TGRDALRN 23


>sp|GATD_HALWD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Haloquadratum walsbyi (strain DSM 16790

Query: 3 TGRDLLQ 9
TGRDLL+
Sbjct: 388 TGRDLLE 394


>sp|GATD_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosphaera stadtmanae (strain ATCC

Query: 2 ATGRDLLQN 10
++GR LLQN
Sbjct: 376 SSGRRLLQN 384


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 1 NATGRDLLQN 10
NAT RD+L++
Sbjct: 7 NATRRDVLKS 16


>sp|GATD_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Halobacterium salinarum (strain ATCC

Query: 3 TGRDLL 8
TGRDLL
Sbjct: 372 TGRDLL 377


>sp|GATD_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Halobacterium salinarum (strain ATCC

Query: 3 TGRDLL 8
TGRDLL
Sbjct: 372 TGRDLL 377




53|Sequence|261|270|DLLQNLLKCN

>sp|GGR_METMA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DLLQNLLKCN 10
DLLQ L K N
Sbjct: 375 DLLQALFKAN 384


>sp|GGR_METAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DLLQNLLKCN 10
DLLQ L K N
Sbjct: 375 DLLQALFKAN 384


>sp|FDHD_SULTO|SULFUR carrier protein FdhD|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 NLLKCN 10
N+LKCN
Sbjct: 115 NILKCN 120


>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DLLQNLLK 8
DLL NLLK
Sbjct: 24 DLLVNLLK 31


>sp|HCGF_METM5|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 3 LQNLLKCN 10
L+N LKCN
Sbjct: 93 LKNKLKCN 100


>sp|SYS_SULTO|SERINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DLLQNLLK 8
D+L+N+LK
Sbjct: 163 DMLENVLK 170


>sp|Y360_CALMQ|PROTEIN Cmaq_0360|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DLLQNLLKCN 10
DL++ L KC+
Sbjct: 206 DLIEELKKCH 215


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DLLQNLLK 8
DL++N+LK
Sbjct: 262 DLIENVLK 269


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 DLLQNLLKCN 10
DL++ L CN
Sbjct: 660 DLIKKCLDCN 669


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DLLQNLLKCN 10
DL++ L CN
Sbjct: 660 DLIKKCLDCN 669


>sp|PGK_PYRAE|PHOSPHOGLYCERATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DLLQNLLKC 9
DL+ N+ KC
Sbjct: 8 DLIPNINKC 16




54|Sequence|266|275|LLKCNPVQRI

>sp|Y2425_METAR|PROTEIN UNCMA_24250|Methanocella arvoryzae (strain DSM 22066

Query: 1 LLKCNPVQR 9
LLKC P++R
Sbjct: 108 LLKCKPLER 116


>sp|RFCL_METB6|REPLICATION factor C large subunit|Methanoregula boonei (strain DSM 21154

Query: 2 LKCNPVQ 8
L+C PVQ
Sbjct: 146 LRCEPVQ 152


>sp|SPSS_META3|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LLKCNPVQR 9
L+ NP+QR
Sbjct: 22 LIDLNPIQR 30




55|Sequence|271|280|PVQRISAEEA

>sp|Y3508_METJA|PROBABLE helicase MJECL08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVQRISAEEA 10
P+Q+I EEA
Sbjct: 350 PLQKIEDEEA 359


>sp|FTSZ1_PYRAB|CELL division protein FtsZ 1|Pyrococcus abyssi (strain GE5 /

Query: 2 VQRISAEE 9
V+R+SAEE
Sbjct: 9 VERVSAEE 16


>sp|DPHB_THEON|DIPHTHINE synthase|Thermococcus onnurineus (strain NA1)

Query: 1 PVQRISAEE 9
P++R+S EE
Sbjct: 54 PIRRLSREE 62




56|Sequence|276|285|SAEEALQHPY

>sp|ACTH_THEAC|ARCHAEAL actin homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 AEEALQHP 9
A+EAL HP
Sbjct: 230 AQEALSHP 237


>sp|RFCL_HALLT|REPLICATION factor C large subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 SAEEALQHPY 10
SAEEALQ Y
Sbjct: 250 SAEEALQSAY 259


>sp|FTHS_THEAC|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 AEEALQHPY 10
AEE +++PY
Sbjct: 455 AEEIMENPY 463


>sp|CBID_ARCFU|COBALT-PRECORRIN-5B C(1)-methyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EEALQHP 9
+EAL+HP
Sbjct: 240 DEALKHP 246


>sp|ARLY_PYRIL|ARGININOSUCCINATE lyase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SAEEALQHP 9
S EEALQ P
Sbjct: 395 SIEEALQRP 403


>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SAEEALQHPY 10
+AEEALQ+ Y
Sbjct: 244 AAEEALQNSY 253


>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 AEEALQH 8
AEE LQH
Sbjct: 200 AEECLQH 206


>sp|RFCL_NATPD|REPLICATION factor C large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SAEEALQHPY 10
SAEEALQ Y
Sbjct: 235 SAEEALQTAY 244


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 EEALQHP 9
EE+L+HP
Sbjct: 304 EESLKHP 310


>sp|PHS_NATPD|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Natronomonas pharaonis

Query: 2 AEEALQHP 9
AEEA HP
Sbjct: 48 AEEAFHHP 55


>sp|PHS_HALSA|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Halobacterium salinarum

Query: 2 AEEALQHP 9
A+EA HP
Sbjct: 48 ADEAFHHP 55


>sp|PHS_HALS3|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Halobacterium salinarum

Query: 2 AEEALQHP 9
A+EA HP
Sbjct: 48 ADEAFHHP 55


>sp|TOP6B_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 2 AEEALQHP 9
AEE L HP
Sbjct: 231 AEEILPHP 238


>sp|TOP6B_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AEEALQHP 9
AEE L HP
Sbjct: 231 AEEILPHP 238




57|Sequence|281|292|LQHPYFSDFCPP

>sp|Y2292_ARCFU|UNCHARACTERIZED protein AF_2292|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LQHPYFSDFCPP 12
LQH Y + FCPP
Sbjct: 211 LQHYYGAPFCPP 222


>sp|KAE1_PYRNV|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum neutrophilum

Query: 4 PYFSDFCP 11
P+F D CP
Sbjct: 324 PWFRDLCP 331


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QHPYFSDFCP 11
+ P+F FCP
Sbjct: 485 RRPWFQPFCP 494


>sp|RS2_METS5|SMALL ribosomal subunit protein uS2|Metallosphaera sedula (strain ATCC

Query: 1 LQHPYFSDFCPP 12
L +PY DF P
Sbjct: 125 LTNPYLEDFIEP 136


>sp|GGR_METMP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain DSM 14266

Query: 5 YFSDFCP 11
YF D CP
Sbjct: 197 YFGDICP 203


>sp|GGR_METM7|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C7 /

Query: 5 YFSDFCP 11
YF D CP
Sbjct: 197 YFGDICP 203


>sp|GGR_METM6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C6 /

Query: 5 YFSDFCP 11
YF D CP
Sbjct: 197 YFGDICP 203


>sp|GGR_METM5|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C5 /

Query: 5 YFSDFCP 11
YF D CP
Sbjct: 197 YFGDICP 203


>sp|GGR_META3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 YFSDFCP 11
YF D CP
Sbjct: 198 YFGDICP 204


>sp|KAE1_PYRIL|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum islandicum

Query: 4 PYFSDFCPP 12
P+F D C P
Sbjct: 324 PWFYDLCNP 332


>sp|SFSA_METS3|SUGAR fermentation stimulation protein homolog|Methanobrevibacter smithii

Query: 1 LQHPYFSDFCP 11
+QHP +DF P
Sbjct: 181 IQHPAGNDFRP 191


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain

Query: 2 QHPYFSDFCP 11
+ P F D+CP
Sbjct: 4 RKPVFVDWCP 13


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 YFSDFCPP 12
YFSDF P
Sbjct: 430 YFSDFSDP 437


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 QHPYFSDFCP 11
QH S FCP
Sbjct: 711 QHTSSSPFCP 720


>sp|SYW_ARCFU|TRYPTOPHAN--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HPYFSDFCPP 12
HP SDF P
Sbjct: 191 HPQLSDFGGP 200


>sp|Y762_METJA|UNCHARACTERIZED transporter MJ0762|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LQHPYFSDFCP 11
L+HP S F P
Sbjct: 73 LKHPVLSSFSP 83


>sp|Y1537_METJA|UNCHARACTERIZED protein MJ1537|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQHPYFSDF 9
L+HP F D+
Sbjct: 106 LRHPTFEDY 114


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PYFSDF 9
P+FSDF
Sbjct: 755 PFFSDF 760


>sp|LYSY_HALWD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 QHPYF 6
QHPYF
Sbjct: 25 QHPYF 29


>sp|Y1349_METJA|UNCHARACTERIZED protein MJ1349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQHPYFSDFC 10
++HP ++FC
Sbjct: 60 VEHPISAEFC 69


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QHPYFSDF 9
++PY+ DF
Sbjct: 197 ENPYYKDF 204


>sp|CCA_PYRIL|CCA-ADDING enzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 2 QHPYFS 7
QHPY S
Sbjct: 104 QHPYLS 109


>sp|PYRG_META3|CTP synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LQHPYF 6
L HPYF
Sbjct: 503 LTHPYF 508


>sp|Y061_SULTO|PUTATIVE esterase STK_00610|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LQHPYFSDFC 10
+Q PY +FC
Sbjct: 31 IQIPYKEEFC 40


>sp|DNLI_METMP|DNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 6 FSDFC 10
FSDFC
Sbjct: 3 FSDFC 7


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQHPYF 6
++HPYF
Sbjct: 953 IRHPYF 958


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 LQHPYFS 7
L HP+FS
Sbjct: 735 LPHPFFS 741


>sp|Y1350_METJA|UNCHARACTERIZED protein MJ1350|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PYFSDFC 10
PY +FC
Sbjct: 217 PYIEEFC 223


>sp|Y1302_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ1302|Methanocaldococcus jannaschii

Query: 5 YFSDFCP 11
Y DFCP
Sbjct: 105 YCHDFCP 111


>sp|RNP3_METBF|RIBONUCLEASE P protein component 3|Methanosarcina barkeri (strain Fusaro /

Query: 4 PYFSDFC 10
P F DFC
Sbjct: 4 PKFYDFC 10


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LQHPYFSDFCPP 12
L PY S+ PP
Sbjct: 499 LLKPYISETKPP 510


>sp|GGR_METVS|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus vannielii (strain ATCC 35089

Query: 5 YFSDFCP 11
YF + CP
Sbjct: 197 YFGEICP 203


>sp|RNP3_METAC|RIBONUCLEASE P protein component 3|Methanosarcina acetivorans (strain ATCC

Query: 4 PYFSDFC 10
P F DFC
Sbjct: 4 PKFYDFC 10


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 QHPYFSD 8
QHP FS+
Sbjct: 223 QHPRFSE 229


>sp|G3PP_METJA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 HPYFSD 8
HP+F D
Sbjct: 134 HPFFDD 139


>sp|RNP3_METMA|RIBONUCLEASE P protein component 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PYFSDFC 10
P F DFC
Sbjct: 4 PEFYDFC 10


>sp|Y790_METJA|UNCHARACTERIZED protein MJ0790|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PYFSD 8
PYFSD
Sbjct: 88 PYFSD 92


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 QHPYFS 7
QHPY S
Sbjct: 104 QHPYVS 109


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 QHPYFS 7
QHPY S
Sbjct: 102 QHPYLS 107


>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii (strain

Query: 3 HPYFSDFCP 11
HPY F P
Sbjct: 108 HPYKGKFIP 116


>sp|Y2548_METHJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanospirillum

Query: 3 HPYFSDFCPP 12
H YF + PP
Sbjct: 105 HDYFVEDSPP 114


>sp|Y576_METJA|UNCHARACTERIZED transporter MJ0576|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LQHPYFSDFCP 11
L+HP S F P
Sbjct: 80 LKHPVLSAFYP 90


>sp|SYK_SACS2|LYSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 HPYFSDF 9
HPY DF
Sbjct: 439 HPYDKDF 445


>sp|XYLF_SULAC|XYLOSE/ARABINOSE-BINDING protein XylF|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QHPYFSDFCP 11
Q PY F P
Sbjct: 333 QQPYLQGFLP 342


>sp|AGL7_HALVD|LOW-SALT glycan biosynthesis sulfotransferase Agl7|Haloferax volcanii

Query: 4 PYFSDFCPP 12
PYF D+ P
Sbjct: 152 PYFRDYNDP 160


>sp|OGT_SULTO|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LQHPYFSDF 9
L + YF+DF
Sbjct: 37 LDNDYFTDF 45






THE END