1|SequenceR|10|1|SAGKNESDKM
>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P
Query: 1 SAGKNESDK 9
S+G+NE DK
Sbjct: 225 SSGENEDDK 233
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SAGKNESDKM 10
S G+NE+D M
Sbjct: 528 SWGENETDVM 537
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 GKNESDKM 10
G N SDKM
Sbjct: 1188 GANASDKM 1195
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 GKNESDKM 10
G N SDKM
Sbjct: 1188 GANASDKM 1195
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 GKNESD 8
G+NESD
Sbjct: 531 GENESD 536
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 GKNESD 8
G+NESD
Sbjct: 531 GENESD 536
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 AGKNESD 8
GKNES+
Sbjct: 450 GGKNESE 456
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 GKNESDKM 10
G N SD+M
Sbjct: 1186 GSNASDRM 1193
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 GKNESDKM 10
G N SD+M
Sbjct: 1186 GSNASDRM 1193
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 GKNESDKM 10
G N SD+M
Sbjct: 1186 GSNASDRM 1193
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 GKNESDKM 10
G N SD+M
Sbjct: 1186 GSNASDRM 1193
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 GKNESDKM 10
G N SD+M
Sbjct: 1186 GSNASDRM 1193
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 GKNESDKM 10
G N SD+M
Sbjct: 1187 GANASDRM 1194
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 3 GKNESDK 9
GK++SDK
Sbjct: 390 GKHKSDK 396
2|SequenceR|15|6|EMDPSSAGKN
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 EMDPSSAGK 9
E DPS GK
Sbjct: 1890 EEDPSLTGK 1898
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 EMDPS 5
EMDPS
Sbjct: 1408 EMDPS 1412
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 EMDPS 5
EMDPS
Sbjct: 1408 EMDPS 1412
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 EMDPSSAGKN 10
EM P GKN
Sbjct: 231 EMSPFYDGKN 240
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 EMDPSSAGKN 10
EM P GKN
Sbjct: 231 EMSPFYDGKN 240
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 EMDPSSAGKN 10
EM P GKN
Sbjct: 231 EMSPFYDGKN 240
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 EMDPSSAGKN 10
E++P+S KN
Sbjct: 1352 EVNPASFSKN 1361
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 3 DPSSAGKN 10
+PS+AG N
Sbjct: 231 EPSAAGAN 238
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 3 DPSSAGK 9
DP SAG+
Sbjct: 50 DPGSAGR 56
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 EMDPSSAGKN 10
EM+ + +GKN
Sbjct: 1725 EMERALSGKN 1734
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 1 EMDPSSAGKN 10
E+DP KN
Sbjct: 33 EVDPDDVNKN 42
3|SequenceR|20|11|GGYSPEMDPS
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 GGYSPEM 7
GG+SPE+
Sbjct: 2054 GGFSPEL 2060
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 YSPEMDP 9
+SPE DP
Sbjct: 49 FSPEFDP 55
>sp|GJ_HHV11|ENVELOPE glycoprotein J|Human herpesvirus 1 (strain 17)
Query: 1 GGYSPEMDP 9
G Y P MDP
Sbjct: 81 GRYHPYMDP 89
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GYSPEMD 8
GY P MD
Sbjct: 265 GYDPAMD 271
>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P
Query: 1 GGYSPEMD 8
GG+ PE+D
Sbjct: 109 GGHDPEID 116
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 2 GYSPEMD 8
GY P MD
Sbjct: 265 GYDPAMD 271
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 1 GGYSPE 6
GGY PE
Sbjct: 455 GGYDPE 460
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 GYSPEM 7
YSPEM
Sbjct: 1042 AYSPEM 1047
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 GYSPEM 7
YSPEM
Sbjct: 1042 AYSPEM 1047
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 GGYSPEMDP 9
G Y E DP
Sbjct: 484 GKYGREFDP 492
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 1 GGYSPEMDP 9
G Y E DP
Sbjct: 484 GKYGREFDP 492
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GGYSPEMDP 9
G Y E DP
Sbjct: 484 GKYGREFDP 492
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 GGYSPEMDP 9
G Y E DP
Sbjct: 484 GKYGREFDP 492
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 2 GYSPEMDPS 10
G+S M+PS
Sbjct: 101 GWSSRMEPS 109
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 1 GGYSPEMDP 9
GGY MDP
Sbjct: 125 GGYLGPMDP 133
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 3 YSPEMDPS 10
Y+P+ PS
Sbjct: 492 YTPDFQPS 499
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GGYSPEM 7
GG SPE+
Sbjct: 274 GGLSPEI 280
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 4 SPEMDP 9
+PE+DP
Sbjct: 33 APEVDP 38
4|SequenceR|25|16|MDFLGGGYSP
>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 DFLGGGYSP 10
+FLG G+SP
Sbjct: 436 NFLGKGWSP 444
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 1 MDFLGGGY 8
MDF GGY
Sbjct: 322 MDFAPGGY 329
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 1 MDFLGGGY 8
MDF GGY
Sbjct: 322 MDFAPGGY 329
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 1 MDFLGGGY 8
MDF GGY
Sbjct: 322 MDFAPGGY 329
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 1 MDFLGGGY 8
MDF GGY
Sbjct: 322 MDFAPGGY 329
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 1 MDFLGGGY 8
MDF GGY
Sbjct: 322 MDFAPGGY 329
>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)
Query: 1 MDFLGGGYSP 10
MD GG SP
Sbjct: 91 MDLTNGGVSP 100
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 MDFLGGGY 8
MDF GG +
Sbjct: 801 MDFAGGKF 808
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 DFLGGGYSP 10
+FLG +SP
Sbjct: 437 NFLGKSWSP 445
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 GGGYSP 10
GGGY P
Sbjct: 540 GGGYIP 545
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 MDFLGGGY 8
+DF G GY
Sbjct: 1040 VDFCGKGY 1047
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 MDFLGGGY 8
+DF G GY
Sbjct: 1022 VDFCGKGY 1029
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 MDFLGGGYS 9
+DF GG S
Sbjct: 1042 LDFFKGGVS 1050
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 4 LGGGYSP 10
LG GY P
Sbjct: 691 LGSGYDP 697
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 DFLGGGYSP 10
DF G Y P
Sbjct: 3480 DFTGNFYGP 3488
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 DFLGGGYSP 10
DF G Y P
Sbjct: 3480 DFTGNFYGP 3488
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 DFLGGGYSP 10
DF G Y P
Sbjct: 3510 DFTGNFYGP 3518
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 DFLGGGYSP 10
DF G Y P
Sbjct: 3510 DFTGNFYGP 3518
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 DFLGGGY 8
DF GGY
Sbjct: 522 DFTEGGY 528
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 4 LGGGYSP 10
LG GY P
Sbjct: 707 LGSGYDP 713
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 2 DFLGGGYS 9
++LGG YS
Sbjct: 110 NWLGGTYS 117
5|SequenceR|30|21|AGGKVMDFLG
>sp|E1BS_ADE05|E1B protein, small T-antigen|Human adenovirus C serotype 5
Query: 1 AGGKVMDFLG 10
+GG ++DFL
Sbjct: 110 SGGYLLDFLA 119
>sp|E1BS_ADE02|E1B protein, small T-antigen|Human adenovirus C serotype 2
Query: 1 AGGKVMDFLG 10
+GG ++DFL
Sbjct: 110 SGGYLLDFLA 119
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 GGKVMDF 8
GKV+DF
Sbjct: 386 AGKVLDF 392
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 GGKVMDF 8
GKV+DF
Sbjct: 386 AGKVLDF 392
>sp|PG163_VACCC|PROTEIN OPG163|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 VMDFLG 10
+MDF+G
Sbjct: 27 IMDFIG 32
>sp|PG163_MONPV|PROTEIN OPG163|Monkeypox virus (MPXV)
Query: 5 VMDFLG 10
+MDF+G
Sbjct: 27 IMDFIG 32
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 1 AGGKVMD 7
GG VMD
Sbjct: 159 GGGSVMD 165
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 GKVMDFL 9
G+V+D+L
Sbjct: 2160 GRVLDYL 2166
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 3 GKVMDFL 9
G+V+D+L
Sbjct: 2156 GRVLDYL 2162
>sp|A35_VAR67|TRUNCATED protein A35 homolog|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 VMDFLG 10
+MDF+G
Sbjct: 27 IMDFIG 32
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 5 VMDFLG 10
++DFLG
Sbjct: 160 ILDFLG 165
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 5 VMDFLG 10
++DFLG
Sbjct: 444 ILDFLG 449
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 VMDFLG 10
++DFLG
Sbjct: 444 ILDFLG 449
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 AGGKVMD 7
A GKV+D
Sbjct: 103 AAGKVLD 109
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 AGGKVMD 7
A GKV+D
Sbjct: 103 AAGKVLD 109
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 AGGKVMDFLG 10
G K D+LG
Sbjct: 3384 GGNKYQDYLG 3393
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 AGGKVMD 7
A GKV+D
Sbjct: 104 ASGKVLD 110
6|SequenceR|35|26|SFLRGAGGKV
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 4 RGAGGKV 10
RG+GG++
Sbjct: 60 RGSGGRI 66
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 SFLRGAGGKV 10
+F+RG G K+
Sbjct: 129 TFIRGWGNKL 138
>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United
Query: 2 FLRGAGGKV 10
FL+ A GKV
Sbjct: 6 FLKEASGKV 14
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 4 RGAGGK 9
RGAGG+
Sbjct: 727 RGAGGQ 732
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 SFLRGAGGK 9
+F+RG G K
Sbjct: 129 TFIRGWGNK 137
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 SFLRGAGGK 9
+F+RG G K
Sbjct: 129 TFIRGWGNK 137
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 SFLRGAGGK 9
+F+RG G K
Sbjct: 129 TFIRGWGNK 137
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 SFLRGAGGK 9
+F+RG G K
Sbjct: 129 TFIRGWGNK 137
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 4 RGAGGK 9
RG GGK
Sbjct: 202 RGVGGK 207
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 RGAGGK 9
RG GGK
Sbjct: 204 RGVGGK 209
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 RGAGGK 9
RG GGK
Sbjct: 204 RGVGGK 209
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 RGAGGK 9
RG GGK
Sbjct: 203 RGVGGK 208
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 RGAGGK 9
RG GGK
Sbjct: 204 RGVGGK 209
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 4 RGAGGK 9
RG GGK
Sbjct: 202 RGVGGK 207
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 3 LRGAGGK 9
RGAGG+
Sbjct: 643 FRGAGGE 649
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 3 LRGAGGK 9
RGAGG+
Sbjct: 643 FRGAGGE 649
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 3 LRGAGGK 9
RGAGG+
Sbjct: 643 FRGAGGE 649
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 3 LRGAGGK 9
RGAGG+
Sbjct: 643 FRGAGGE 649
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 LRGAGG 8
LRG+GG
Sbjct: 120 LRGSGG 125
7|SequenceR|40|31|NDKLNSFLRG
>sp|A47_VACCC|PROTEIN A47|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DKLNSFLRG 10
DK++SF RG
Sbjct: 20 DKMDSFKRG 28
>sp|A47_VACCA|PROTEIN A47|Vaccinia virus (strain Ankara) (VACV)
Query: 2 DKLNSFLRG 10
DK++SF RG
Sbjct: 20 DKMDSFKRG 28
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 DKLNSFL 8
DKL SFL
Sbjct: 1241 DKLRSFL 1247
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 3 KLNSFLRG 10
+L+SF+RG
Sbjct: 342 RLSSFIRG 349
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 4 LNSFLRG 10
+NSFL+G
Sbjct: 649 INSFLQG 655
>sp|NCAP_BCCV|NUCLEOPROTEIN Creek Canal orthohantavirus (BCCV)
Query: 2 DKLNSFLRG 10
DK+ FLR
Sbjct: 234 DKIEDFLRA 242
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 4 LNSFLRG 10
+NSFL+G
Sbjct: 649 INSFLQG 655
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 LNSFLRG 10
+NSFL+G
Sbjct: 649 INSFLQG 655
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 DKLNSFL 8
+KLN+FL
Sbjct: 1270 EKLNAFL 1276
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 DKLNSFLRG 10
DK+ S LRG
Sbjct: 1407 DKMASKLRG 1415
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 DKLNSFL 8
+KLN+FL
Sbjct: 1270 EKLNAFL 1276
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 NDKLNSFL 8
+D+LN FL
Sbjct: 1033 DDRLNKFL 1040
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 NDKLNSFL 8
+D+LN FL
Sbjct: 1033 DDRLNKFL 1040
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 NDKLNSFL 8
+D+LN FL
Sbjct: 1033 DDRLNKFL 1040
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 NDKLNSFLR 9
N KL+SF +
Sbjct: 1447 NSKLSSFFQ 1455
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 NDKLNSFLR 9
N KL+SF +
Sbjct: 1447 NSKLSSFFQ 1455
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 NDKLNSFLR 9
N KL+SF +
Sbjct: 1281 NSKLSSFFQ 1289
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 NDKLNSFLR 9
N KL+SF +
Sbjct: 1447 NSKLSSFFQ 1455
>sp|VU84_HHV7J|PROTEIN U84|Human herpesvirus 7 (strain JI)
Query: 4 LNSFLRG 10
+N FLRG
Sbjct: 207 INRFLRG 213
8|SequenceR|45|36|LTDKLNDKLN
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 LTDKLNDKLN 10
++D+LND +N
Sbjct: 113 ISDELNDAIN 122
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 1 LTDKLN 6
LTDK+N
Sbjct: 611 LTDKIN 616
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 1 LTDKLN 6
LTDK+N
Sbjct: 611 LTDKIN 616
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 3 DKLNDKLN 10
+KLND+++
Sbjct: 497 EKLNDRIS 504
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 2 TDKLNDKLN 10
+DKL+D+++
Sbjct: 23 SDKLSDQID 31
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 3 DKLNDKLN 10
+KLND+++
Sbjct: 503 EKLNDRIS 510
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 1 LTDKLNDKLN 10
+ D+LN +LN
Sbjct: 474 IRDRLNKRLN 483
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 3 DKLNDKLN 10
+KLND+++
Sbjct: 497 EKLNDRIS 504
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 3 DKLNDKLN 10
+KLND+++
Sbjct: 497 EKLNDRIS 504
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 3 DKLNDKLN 10
+KLND+++
Sbjct: 503 EKLNDRIS 510
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 3 DKLNDKLN 10
+KLND+++
Sbjct: 497 EKLNDRIS 504
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 3 DKLNDKLN 10
+KLND+++
Sbjct: 509 EKLNDRIS 516
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 3 DKLNDKLN 10
+KLND+++
Sbjct: 510 EKLNDRIS 517
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 3 DKLNDKLN 10
+KLND+++
Sbjct: 496 EKLNDRIS 503
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 3 DKLNDKLN 10
+KLND+++
Sbjct: 496 EKLNDRIS 503
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 DKLNDKLN 10
+KLND+++
Sbjct: 510 EKLNDRIS 517
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 3 DKLNDKLN 10
+KLND+++
Sbjct: 496 EKLNDRIS 503
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LTDKLNDKLN 10
+ DKL KLN
Sbjct: 407 ICDKLTTKLN 416
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 TDKLNDKLN 10
T+K ND L+
Sbjct: 649 TEKANDDLD 657
>sp|PG083_VARV|CORE protease OPG082|Variola virus
Query: 1 LTDKLNDKLN 10
+ DKL KLN
Sbjct: 407 ICDKLTTKLN 416
>sp|PG083_VAR67|CORE protease OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 LTDKLNDKLN 10
+ DKL KLN
Sbjct: 407 ICDKLTTKLN 416
9|SequenceR|50|41|SSTDKLTDKL
***** No hits found ******
10|SequenceR|55|46|SQIVRSSTDK
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 SQIVRSSTDK 10
SQI +S +DK
Sbjct: 1015 SQITKSISDK 1024
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 2 QIVRSSTDK 10
Q+V TDK
Sbjct: 287 QVVERDTDK 295
>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P
Query: 4 VRSSTD 9
VRSSTD
Sbjct: 150 VRSSTD 155
11|SequenceR|60|51|TYSTVSQIVR
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 STVSQIVR 10
+TVSQ+V+
Sbjct: 1595 TTVSQVVK 1602
12|SequenceR|65|56|DLDGKTYSTV
>sp|SEMA_VAR67|SEMAPHORIN-LIKE protein A43|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DLDGKTYSTV 10
D+DG++YS +
Sbjct: 79 DIDGRSYSQI 88
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 DLDGKTYSTV 10
DLD ++STV
Sbjct: 2412 DLDADSWSTV 2421
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 DLDGKTYSTV 10
D D K++STV
Sbjct: 2423 DSDSKSWSTV 2432
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 DLDGKTYSTV 10
D D K++STV
Sbjct: 2423 DSDSKSWSTV 2432
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 DGKTYSTV 10
DGKTY V
Sbjct: 3112 DGKTYMDV 3119
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 1 DLDGKTYSTV 10
D +GKTY+ +
Sbjct: 55 DEEGKTYTAL 64
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 DLDGKTYSTV 10
D +GKTY+ +
Sbjct: 55 DEEGKTYTAL 64
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 LDGKTYST 9
+DG TY+T
Sbjct: 381 VDGVTYTT 388
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 DLDGKTYSTV 10
D +GKTY+ +
Sbjct: 55 DEEGKTYTAL 64
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 DGKTYS 8
DGKT+S
Sbjct: 1528 DGKTFS 1533
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 DGKTYS 8
DGKT+S
Sbjct: 1528 DGKTFS 1533
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 DGKTYS 8
DGKT+S
Sbjct: 1528 DGKTFS 1533
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 DGKTYS 8
DGKT+S
Sbjct: 1528 DGKTFS 1533
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 4 GKTYST 9
GKTYS+
Sbjct: 2 GKTYSS 7
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 4 GKTYST 9
GKTYS+
Sbjct: 2 GKTYSS 7
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 GKTYST 9
GKTYS+
Sbjct: 2 GKTYSS 7
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 GKTYST 9
GKTYS+
Sbjct: 2 GKTYSS 7
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 4 GKTYST 9
GKTYS+
Sbjct: 2 GKTYSS 7
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 4 GKTYST 9
GKTYS+
Sbjct: 2 GKTYSS 7
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 3 DGKTY 7
DGKTY
Sbjct: 874 DGKTY 878
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 3 DGKTYST 9
DGK Y+T
Sbjct: 312 DGKKYNT 318
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 DGKTYST 9
D K YST
Sbjct: 56 DAKAYST 62
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 DGKTYST 9
D K YST
Sbjct: 56 DAKAYST 62
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 DGKTYST 9
D K YST
Sbjct: 53 DAKAYST 59
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 DGKTYST 9
D K YST
Sbjct: 53 DAKAYST 59
>sp|NS8B_SARS|ORF8B protein|Severe acute respiratory syndrome coronavirus
Query: 4 GKTYST 9
G TYST
Sbjct: 13 GNTYST 18
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 LDGKTYSTV 10
LDG TY+ +
Sbjct: 1861 LDGVTYTEI 1869
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LDGKTYSTV 10
LDG TY+ +
Sbjct: 1861 LDGVTYTEI 1869
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 LDGKTYSTV 10
LDG+ ST+
Sbjct: 521 LDGRPLSTI 529
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 LDGKTYSTV 10
LDG+ ST+
Sbjct: 521 LDGRPLSTI 529
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 DGKTYS 8
DGK YS
Sbjct: 1526 DGKLYS 1531
13|SequenceR|70|61|TVYTFDLDGK
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 YTFDLDGK 10
Y FD+D K
Sbjct: 665 YVFDIDAK 672
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 YTFDLDGK 10
Y FD+D K
Sbjct: 665 YVFDIDAK 672
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 TVYTFDLDGK 10
T Y FD+D K
Sbjct: 670 TEYVFDVDKK 679
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 TVYTFDLDGK 10
T Y FD+D K
Sbjct: 670 TEYVFDVDKK 679
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 TVYTFDLDGK 10
T Y FD+D K
Sbjct: 664 TEYVFDVDKK 673
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 TVYTFDLDGK 10
T Y FD+D K
Sbjct: 664 TEYVFDVDKK 673
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 TVYTFD 6
TVYTFD
Sbjct: 893 TVYTFD 898
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 YTFDLDGK 10
+TFD+DG
Sbjct: 4509 FTFDIDGS 4516
Query: 3 YTFDLDG 9
++FDL+G
Sbjct: 1193 FSFDLNG 1199
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 YTFDLDGK 10
+TFD+DG
Sbjct: 4559 FTFDIDGS 4566
Query: 3 YTFDLDG 9
++FDL+G
Sbjct: 1243 FSFDLNG 1249
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 YTFDLDGK 10
+TFD+DG
Sbjct: 4529 FTFDIDGS 4536
Query: 3 YTFDLDG 9
++FDL+G
Sbjct: 1213 FSFDLNG 1219
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VYTFDLD 8
VYT DLD
Sbjct: 541 VYTADLD 547
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 YTFDLDGK 10
Y FD+D +
Sbjct: 665 YVFDIDAR 672
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 YTFDLDGK 10
Y FD+D +
Sbjct: 665 YVFDIDAR 672
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 YTFDLDGK 10
Y FD+D K
Sbjct: 669 YVFDVDKK 676
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 YTFDLDGK 10
Y FD+D K
Sbjct: 665 YVFDVDQK 672
Query: 2 VYTFDLD 8
+Y FDLD
Sbjct: 1058 MYGFDLD 1064
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 1 TVYTFDLD 8
T +TFD D
Sbjct: 364 TEFTFDFD 371
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 4 TFDLDG 9
TFDL+G
Sbjct: 680 TFDLEG 685
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 4 TFDLDG 9
TFDL+G
Sbjct: 680 TFDLEG 685
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 4 TFDLDG 9
TFDL+G
Sbjct: 680 TFDLEG 685
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 4 TFDLDG 9
TFDL+G
Sbjct: 680 TFDLEG 685
>sp|KRB2_MONPV|PSEUDOKINASE OPG198|Monkeypox virus (MPXV)
Query: 3 YTFDLDGK 10
Y FD DGK
Sbjct: 6 YCFDNDGK 13
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 3 YTFDLDG 9
YT D DG
Sbjct: 953 YTMDCDG 959
>sp|KRB2_VACCC|PSEUDOKINASE OPG198|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 YTFDLDGK 10
Y FD DGK
Sbjct: 6 YCFDNDGK 13
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 YTFDLDG 9
YT D DG
Sbjct: 953 YTIDCDG 959
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 YTFDLDG 9
YT D DG
Sbjct: 953 YTIDCDG 959
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 YTFDLDG 9
YT D DG
Sbjct: 953 YTIDCDG 959
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 YTFDLDG 9
YT D DG
Sbjct: 953 YTIDCDG 959
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 YTFDLDG 9
YT D DG
Sbjct: 953 YTIDCDG 959
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 YTFDLDG 9
YT D DG
Sbjct: 953 YTIDCDG 959
>sp|KRB2_VACCA|PSEUDOKINASE OPG198|Vaccinia virus (strain Ankara) (VACV)
Query: 3 YTFDLDGK 10
Y FD DGK
Sbjct: 6 YCFDNDGK 13
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 YTFDLDGK 10
YT + DGK
Sbjct: 764 YTLESDGK 771
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 TVYTFDLDG 9
++Y+ LDG
Sbjct: 462 SIYSLKLDG 470
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 TVYTFDLDG 9
++Y+ LDG
Sbjct: 462 SIYSLKLDG 470
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 TVYTFD 6
TVY FD
Sbjct: 894 TVYNFD 899
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 YTFDLD 8
YT DLD
Sbjct: 1987 YTIDLD 1992
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 YTFDLD 8
YT DLD
Sbjct: 1987 YTIDLD 1992
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 YTFDLD 8
YT DLD
Sbjct: 1984 YTIDLD 1989
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 2 VYTFDLD 8
+Y FD D
Sbjct: 137 IYVFDTD 143
>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13
Query: 2 VYTFDLD 8
+Y FD D
Sbjct: 137 IYVFDTD 143
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 TVYTFDLDGK 10
T Y D++GK
Sbjct: 98 TTYRQDINGK 107
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 TVYTFDLDGK 10
T Y D++GK
Sbjct: 98 TTYRQDINGK 107
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 YTFDLDG 9
++FDL+G
Sbjct: 1193 FSFDLNG 1199
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 YTFDLDG 9
++FDL+G
Sbjct: 1213 FSFDLNG 1219
>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)
Query: 2 VYTFDLDGK 10
V FD++GK
Sbjct: 221 VIIFDVNGK 229
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 YTFDLDG 9
++FDL+G
Sbjct: 1243 FSFDLNG 1249
14|SequenceR|75|66|VIIRSTVYTF
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 VIIRSTV 7
V++RSTV
Sbjct: 170 VVVRSTV 176
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 VIIRSTV 7
V++RST+
Sbjct: 170 VVVRSTI 176
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 IIRSTVY 8
+IRST+Y
Sbjct: 705 LIRSTLY 711
15|SequenceR|80|71|LPFSMVIIRS
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 LPFSMVIIRS 10
LP S+V+I+S
Sbjct: 827 LPLSLVVIKS 836
>sp|PG165_VACCC|PROTEIN OPG165|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LPFSMVIIR 9
LP S+ IIR
Sbjct: 154 LPLSVFIIR 162
16|SequenceR|85|76|IDVNDLPFSM
>sp|PG053_VARV|EFC-ASSOCIATED protein OPG053|Variola virus
Query: 1 IDVNDLP 7
ID+ND+P
Sbjct: 91 IDLNDVP 97
>sp|PG053_VAR67|EFC-ASSOCIATED protein OPG053|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 IDVNDLP 7
ID+ND+P
Sbjct: 91 IDLNDVP 97
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 4 NDLPFSM 10
N+LPFS+
Sbjct: 79 NELPFSV 85
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas)
Query: 4 NDLPFSM 10
N+LPFS+
Sbjct: 79 NELPFSV 85
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 2 DVNDLPF 8
D ND+PF
Sbjct: 423 DDNDIPF 429
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 DVNDLPF 8
D ND+PF
Sbjct: 423 DDNDIPF 429
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 DVNDLPFS 9
D+N PFS
Sbjct: 166 DINQTPFS 173
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 DVNDLPFS 9
D+N PFS
Sbjct: 166 DINQTPFS 173
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 DVNDLPFS 9
D+ND+P S
Sbjct: 848 DLNDVPKS 855
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IDVNDLPFSM 10
IDV D FS+
Sbjct: 719 IDVGDAYFSI 728
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 DVNDLPFS 9
+VN PFS
Sbjct: 166 NVNQTPFS 173
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 NDLPFSM 10
N++PF M
Sbjct: 698 NEIPFDM 704
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 NDLPFSM 10
N++PF M
Sbjct: 698 NEIPFDM 704
17|SequenceR|90|81|QNRFGIDVND
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 2 NRFGIDVND 10
N+F D ND
Sbjct: 549 NKFPFDAND 557
>sp|PG053_VARV|EFC-ASSOCIATED protein OPG053|Variola virus
Query: 5 GIDVND 10
GID+ND
Sbjct: 90 GIDLND 95
>sp|PG053_VAR67|EFC-ASSOCIATED protein OPG053|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 GIDVND 10
GID+ND
Sbjct: 90 GIDLND 95
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 QNRFGIDVN 9
QN+F D+N
Sbjct: 632 QNKFDKDLN 640
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 QNRFGIDV 8
QNR G+D+
Sbjct: 514 QNRRGLDL 521
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 QNRFGIDV 8
QNR G+D+
Sbjct: 514 QNRRGLDL 521
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 QNRFGIDV 8
QNR G+D+
Sbjct: 514 QNRRGLDL 521
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 QNRFGIDV 8
QNR G+D+
Sbjct: 373 QNRRGLDL 380
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 QNRFGIDV 8
QNR G+D+
Sbjct: 380 QNRRGLDL 387
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 QNRFGIDV 8
QNR G+D+
Sbjct: 378 QNRRGLDL 385
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 QNRFGIDV 8
QNR G+D+
Sbjct: 377 QNRRGLDL 384
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 QNRFGIDV 8
QNR G+D+
Sbjct: 377 QNRRGLDL 384
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 QNRFGIDV 8
QNR G+D+
Sbjct: 377 QNRRGLDL 384
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 QNRFGIDV 8
QNR G+D+
Sbjct: 377 QNRRGLDL 384
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 QNRFGIDV 8
QNR G+D+
Sbjct: 377 QNRRGLDL 384
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 QNRFGIDV 8
QNR G+D+
Sbjct: 377 QNRRGLDL 384
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 QNRFGIDVN 9
+N FG D+N
Sbjct: 2341 RNSFGKDLN 2349
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 QNRFGIDVN 9
+N FG D+N
Sbjct: 2341 RNSFGKDLN 2349
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 3 RFGIDVND 10
RF + +ND
Sbjct: 197 RFALTIND 204
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 3 RFGIDVND 10
RF + +ND
Sbjct: 197 RFALTIND 204
>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 NRFGIDVN 9
NR G+D++
Sbjct: 102 NRLGVDLD 109
>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NRFGIDVN 9
NR G+D++
Sbjct: 102 NRLGVDLD 109
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 NRFGIDVND 10
N G DVND
Sbjct: 5348 NAPGCDVND 5356
18|SequenceR|95|86|RIDDVQNRFG
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 2 IDDVQNRF 9
I DVQN+F
Sbjct: 24 IPDVQNKF 31
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 DDVQNRF 9
DD +NRF
Sbjct: 2220 DDYKNRF 2226
>sp|NEC2_HHV2H|NUCLEAR egress protein 2|Human herpesvirus 2 (strain HG52)
Query: 2 IDDVQNRFG 10
+DDV+ R G
Sbjct: 133 LDDVKGRLG 141
>sp|CFLA_MCV1|VIRAL CASP8 and FADD-like apoptosis|Molluscum contagiosum virus subtype
Query: 1 RIDDVQNRFG 10
R+D +++RFG
Sbjct: 69 RMDLLKSRFG 78
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 1 RIDDVQNRFG 10
R VQNR+G
Sbjct: 262 RAKVVQNRWG 271
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 DDVQNRFG 10
DD+ RFG
Sbjct: 932 DDMVERFG 939
>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41
Query: 5 VQNRFG 10
VQNR+G
Sbjct: 267 VQNRWG 272
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 1 RIDDVQNRF 9
++D+ NRF
Sbjct: 640 KVDEENNRF 648
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 2 IDDVQNRFG 10
IDD+ N FG
Sbjct: 505 IDDLFNAFG 513
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 1 RIDDVQN 7
++DDV+N
Sbjct: 122 KLDDVEN 128
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 1 RIDDVQN 7
++DDV+N
Sbjct: 122 KLDDVEN 128
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 2 IDDVQNRF 9
I DV+N+F
Sbjct: 25 IPDVKNKF 32
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 IDDVQNRF 9
+DD+ N+F
Sbjct: 448 VDDLLNKF 455
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 3 DDVQNRFG 10
D+V RFG
Sbjct: 1737 DEVWGRFG 1744
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 DDVQNRFG 10
D+V RFG
Sbjct: 1767 DEVWGRFG 1774
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 1 RIDDVQNRFG 10
+ DDV+N G
Sbjct: 122 KYDDVENSGG 131
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 RIDDVQN 7
++DD++N
Sbjct: 463 KLDDIEN 469
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 RIDDVQN 7
++DD++N
Sbjct: 463 KLDDIEN 469
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 RIDDVQN 7
++DD++N
Sbjct: 463 KLDDIEN 469
19|SequenceR|100|91|SDLFSRIDDV
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 SDLFSRIDD 9
SD+FSR+ +
Sbjct: 2205 SDIFSRVPE 2213
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 3 LFSRIDD 9
LF+R+DD
Sbjct: 121 LFNRLDD 127
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 3 LFSRIDD 9
LF+R+DD
Sbjct: 156 LFNRLDD 162
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 3 LFSRIDD 9
LF+R+DD
Sbjct: 120 LFNRLDD 126
>sp|VL2_HPV56|MINOR capsid protein L2|Human papillomavirus 56
Query: 2 DLFSRIDD 9
D+++ IDD
Sbjct: 349 DIYANIDD 356
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 2 DLFSRIDD 9
D+++ IDD
Sbjct: 349 DIYANIDD 356
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 2 DLFSRIDD 9
D+++ IDD
Sbjct: 349 DIYANIDD 356
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 3 LFSRIDD 9
LF+++DD
Sbjct: 129 LFNKLDD 135
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 3 LFSRIDD 9
LF+++DD
Sbjct: 120 LFNKLDD 126
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 3 LFSRIDD 9
LF+++DD
Sbjct: 121 LFNKLDD 127
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 FSRIDD 9
F RIDD
Sbjct: 4463 FQRIDD 4468
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 FSRIDD 9
F RIDD
Sbjct: 4483 FQRIDD 4488
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 FSRIDD 9
F RIDD
Sbjct: 4513 FQRIDD 4518
20|SequenceR|105|96|HDLHRSDLFS
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 DLHRSDL 8
D+HR DL
Sbjct: 982 DMHRKDL 988
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 4 HRSDLFS 10
HRSD+FS
Sbjct: 275 HRSDVFS 281
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 4 HRSDLFS 10
HRSD+FS
Sbjct: 275 HRSDVFS 281
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 HDLHRSDLF 9
+DLHR+ L
Sbjct: 2145 YDLHRTALL 2153
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 HDLHRSDL 8
HDL SDL
Sbjct: 582 HDLDASDL 589
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 HDLHRSDL 8
HDL SDL
Sbjct: 581 HDLDASDL 588
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 HDLHRSDL 8
HDL SDL
Sbjct: 581 HDLDASDL 588
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 1 HDLHRSDLF 9
HD HR F
Sbjct: 11 HDYHRQTAF 19
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 2 DLHRSDLF 9
DLH +LF
Sbjct: 316 DLHHKELF 323
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 2 DLHRSDLF 9
DLH +LF
Sbjct: 316 DLHHKELF 323
21|SequenceR|110|101|NYVTYHDLHR
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 5 YHDLH 9
YHDLH
Sbjct: 509 YHDLH 513
>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)
Query: 1 NYVTYHDLH 9
+Y +HDLH
Sbjct: 191 SYFKFHDLH 199
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 1 NYVTYHDLH 9
+Y +HDLH
Sbjct: 190 SYFKFHDLH 198
Query: 4 TYHDLHR 10
++HD HR
Sbjct: 9 SHHDYHR 15
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 YVTYHDLH 9
Y T HDLH
Sbjct: 430 YKTTHDLH 437
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 YVTYHDLH 9
Y T HDLH
Sbjct: 430 YKTTHDLH 437
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 YVTYHDLH 9
Y T HDLH
Sbjct: 430 YKTTHDLH 437
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 YVTYHDLH 9
Y T HDLH
Sbjct: 430 YKTTHDLH 437
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 YVTYHDLH 9
Y ++H+LH
Sbjct: 299 YSSFHNLH 306
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 YVTYHDLH 9
Y ++H+LH
Sbjct: 299 YSSFHNLH 306
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 NYVTYHDLH 9
+Y ++H LH
Sbjct: 298 HYSSFHSLH 306
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 2 YVTYHDLH 9
Y ++H+LH
Sbjct: 299 YSSFHNLH 306
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 2 YVTYHDLH 9
Y ++H LH
Sbjct: 299 YSSFHSLH 306
>sp|TAX_HTL1L|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 YVTYHDLH 9
Y ++H LH
Sbjct: 298 YSSFHSLH 305
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 YVTYHDLH 9
Y ++H LH
Sbjct: 299 YSSFHSLH 306
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 1 NYVTYH 6
NY+ YH
Sbjct: 545 NYLAYH 550
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 1 NYVTYH 6
NY+ YH
Sbjct: 545 NYLAYH 550
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 3 VTYHDLH 9
V HDLH
Sbjct: 277 VNLHDLH 283
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 NYVTYHDLHR 10
NYV + HR
Sbjct: 1235 NYVQFKSKHR 1244
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 NYVTYHDLHR 10
NYV + HR
Sbjct: 1235 NYVQFKSKHR 1244
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 NYVTYHDLH 9
+Y+ YH LH
Sbjct: 347 SYMKYHHLH 355
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 1 NYVTYH 6
NY+ YH
Sbjct: 529 NYLAYH 534
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 NYVTYHDLHR 10
NY+ + HR
Sbjct: 1235 NYIQFKSKHR 1244
>sp|GAAP_VACCL|GOLGI anti-apoptotic protein|Vaccinia virus (strain Lister) (VACV)
Query: 3 VTYHDLH 9
VT++D+H
Sbjct: 115 VTFYDVH 121
>sp|GAAP_VACC8|GOLGI anti-apoptotic protein|Vaccinia virus (strain LC16m8) (VACV)
Query: 3 VTYHDLH 9
VT++D+H
Sbjct: 115 VTFYDVH 121
>sp|GAAP_VACC0|GOLGI anti-apoptotic protein|Vaccinia virus (strain LC16m0) (VACV)
Query: 3 VTYHDLH 9
VT++D+H
Sbjct: 115 VTFYDVH 121
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 NYVTYHDLHR 10
NY+ + HR
Sbjct: 1234 NYIQFKSKHR 1243
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 NYVTYHDLHR 10
NY+ + HR
Sbjct: 1242 NYIQFKSKHR 1251
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 NYVTYHDLHR 10
NY+ + HR
Sbjct: 1234 NYIQFKSKHR 1243
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 NYVTYHDLHR 10
NY+ + HR
Sbjct: 1221 NYMQFKSTHR 1230
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 NYVTYHDLHR 10
NY+ + HR
Sbjct: 1237 NYIQFKSKHR 1246
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 NYVTYHDLHR 10
NY+ + HR
Sbjct: 1237 NYIQFKSKHR 1246
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 NYVTYHDLHR 10
+ VTY HR
Sbjct: 67 DLVTYSQYHR 76
>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 VTYHDLH 9
+T HDLH
Sbjct: 59 LTLHDLH 65
>sp|NEC1_HCMVM|NUCLEAR egress protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 VTYHDLH 9
+T HDLH
Sbjct: 59 LTLHDLH 65
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 NYVTYHD 7
+Y T+HD
Sbjct: 6271 SYATHHD 6277
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 VTYHDLH 9
VT HD H
Sbjct: 2097 VTQHDSH 2103
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 NYVTYHDL 8
NY HDL
Sbjct: 821 NYAACHDL 828
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 NYVTYHDL 8
NY HDL
Sbjct: 821 NYAACHDL 828
22|SequenceR|115|106|SKPSLNYVTY
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 3 PSLNYVTY 10
PSL Y TY
Sbjct: 888 PSLGYTTY 895
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 2 KPSLNYVTY 10
KPSL + TY
Sbjct: 363 KPSLYFCTY 371
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 2 KPSLNYVTY 10
KPSL + TY
Sbjct: 354 KPSLFFCTY 362
>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 KPSLNYVTY 10
KPSL + TY
Sbjct: 355 KPSLFFCTY 363
>sp|A40_VAR67|PROTEIN A40 homolog|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SKPSLNYVTY 10
+KP NY Y
Sbjct: 4 NKPKTNYAGY 13
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 SKPSLNY 7
SKP+L Y
Sbjct: 497 SKPTLGY 503
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SKPSLNY 7
SKP+L Y
Sbjct: 820 SKPTLGY 826
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 1 SKPSLNYV 8
SKP++ YV
Sbjct: 285 SKPAVEYV 292
>sp|NS1_I02A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 SKPSLNYVT 9
S P+L Y+T
Sbjct: 83 SLPALRYLT 91
>sp|NS1_I02A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Guinea
Query: 1 SKPSLNYVT 9
S P+L Y+T
Sbjct: 83 SLPALRYLT 91
>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)
Query: 4 SLNYVT 9
SLNYVT
Sbjct: 160 SLNYVT 165
>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 SLNYVT 9
SLNYVT
Sbjct: 160 SLNYVT 165
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 SKPSLNYVTY 10
K SLN +TY
Sbjct: 1990 EKASLNSLTY 1999
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 SKPSLNYVTY 10
+KP + YV +
Sbjct: 3869 TKPGMKYVKW 3878
>sp|YL11_ADE41|UNCHARACTERIZED 16.5 kDa protein in|Human adenovirus F serotype 41
Query: 1 SKPSLNYV 8
SKP+L Y+
Sbjct: 51 SKPALTYL 58
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 SKPSLNYVTY 10
K SLN +TY
Sbjct: 1990 EKASLNSLTY 1999
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 SKPSLNYVTY 10
+KP + YV +
Sbjct: 3869 TKPGMKYVKW 3878
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 4 SLNYVTY 10
SLN++TY
Sbjct: 1517 SLNHMTY 1523
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 PSLNY 7
PSLNY
Sbjct: 4074 PSLNY 4078
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 PSLNY 7
PSLNY
Sbjct: 4074 PSLNY 4078
23|SequenceR|120|111|KATRYSKPSL
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 RYSKPSL 10
RY+KP++
Sbjct: 4495 RYNKPTI 4501
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 2 ATRYSK 7
ATRYSK
Sbjct: 176 ATRYSK 181
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 ATRYSKP 8
A +YSKP
Sbjct: 1709 ALQYSKP 1715
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 ATRYSKP 8
A +YSKP
Sbjct: 1709 ALQYSKP 1715
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 3 TRYSKPSL 10
T Y +PSL
Sbjct: 556 THYVRPSL 563
24|SequenceR|125|116|VRSHFKATRY
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 SHFKATRY 10
+HF +RY
Sbjct: 334 THFSVSRY 341
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 RSHFKATR 9
R HF+AT+
Sbjct: 356 RVHFQATQ 363
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 VRSHFKATRY 10
+R +KATR+
Sbjct: 609 LRPAYKATRF 618
>sp|NP_ADE04|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus E serotype 4
Query: 1 VRSHFKA 7
VR HF+A
Sbjct: 36 VRGHFRA 42
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 SHFKATRY 10
+HF +RY
Sbjct: 335 THFSVSRY 342
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 VRSHFKATR 9
+RS FK +R
Sbjct: 216 IRSQFKQSR 224
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 SHFKATR 9
++FKATR
Sbjct: 1919 ANFKATR 1925
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 VRSHFKATR 9
+RS FK +R
Sbjct: 216 IRSQFKQSR 224
>sp|D3_VARV|CORE protein D3|Variola virus
Query: 1 VRSHFKATRY 10
+RSH++ +++
Sbjct: 176 IRSHYRVSKH 185
>sp|D3_VAR67|CORE protein D3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VRSHFKATRY 10
+RSH++ +++
Sbjct: 176 IRSHYRVSKH 185
>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VRSHFKATRY 10
+RSH++ +++
Sbjct: 176 IRSHYRVSKH 185
>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)
Query: 1 VRSHFKATRY 10
+RSH++ +++
Sbjct: 176 IRSHYRVSKH 185
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 SHFKATRY 10
+HF +RY
Sbjct: 334 THFSISRY 341
>sp|PG115_MONPV|CORE protein OPG115|Monkeypox virus (MPXV)
Query: 1 VRSHFKATRY 10
+RSH++ +++
Sbjct: 172 IRSHYRVSKH 181
>sp|PG115_VACCA|CORE protein OPG115|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VRSHFKATRY 10
+RSH++ +++
Sbjct: 172 IRSHYRVSKH 181
>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P
Query: 1 VRSHFKAT 8
V HF+AT
Sbjct: 184 VDDHFRAT 191
25|SequenceR|130|121|WSCESVRSHF
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 WSCESVRSHF 10
WSC S R+H
Sbjct: 1092 WSCSSERAHL 1101
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 3 CESVRSHF 10
CE R HF
Sbjct: 116 CERARRHF 123
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 3 CESVRSHF 10
CE R HF
Sbjct: 116 CERARRHF 123
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 3 CESVRSHF 10
CE R HF
Sbjct: 116 CERARRHF 123
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 3 CESVRSHF 10
CE R HF
Sbjct: 116 CERARRHF 123
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 CESVRSHF 10
CE R HF
Sbjct: 116 CERARPHF 123
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 3 CESVRSHF 10
CE +RS++
Sbjct: 510 CEYIRSYY 517
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 3 CESVRSHF 10
CE +RS++
Sbjct: 510 CEYIRSYY 517
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 CESVRSHF 10
CE +RS++
Sbjct: 510 CEYIRSYY 517
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 CESVRSHF 10
CE +RS++
Sbjct: 510 CEYIRSYY 517
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 CESVRSHF 10
CE +RS++
Sbjct: 502 CEYIRSYY 509
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 3 CESVRSHF 10
CE +RS++
Sbjct: 510 CEYIRSYY 517
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 3 CESVRSHF 10
CE +RS++
Sbjct: 510 CEYIRSYY 517
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 3 CESVRSHF 10
CE +RS++
Sbjct: 510 CEYIRSYY 517
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 3 CESVRSHF 10
CE +RS++
Sbjct: 510 CEYIRSYY 517
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 CESVRSH 9
C++++SH
Sbjct: 1483 CDAIKSH 1489
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 CESVRSH 9
C++++SH
Sbjct: 1482 CDAIKSH 1488
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 2 SCESVRSH 9
+C S+R H
Sbjct: 282 ACHSLREH 289
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 WSCESVRSHF 10
+ C S R H+
Sbjct: 925 YYCSSKRKHY 934
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 3 CESVRSHF 10
CES+ HF
Sbjct: 18 CESIVLHF 25
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 2 SCESVRSHF 10
SC + +SHF
Sbjct: 493 SCVNSKSHF 501
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 WSCESVRSHF 10
+ C S R H+
Sbjct: 925 YYCNSKRKHY 934
>sp|U18_HHV6Z|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 2 SCESVRSHF 10
SC SVR+ +
Sbjct: 57 SCVSVRTSY 65
>sp|U18_HHV6H|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 2 SCESVRSHF 10
SC SVR+ +
Sbjct: 57 SCVSVRTSY 65
26|SequenceR|135|126|AQRIPWSCES
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 2 QRIPWSCES 10
QRIP SC +
Sbjct: 148 QRIPLSCRA 156
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 2 QRIPWSCES 10
QRIP SC +
Sbjct: 150 QRIPLSCRA 158
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 1 AQRIPWSC 8
A+R+ W+C
Sbjct: 123 AERLVWAC 130
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 AQRIPWSC 8
+QR+ W+C
Sbjct: 95 SQRLVWAC 102
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 1 AQRIPWSC 8
A+R+ W+C
Sbjct: 95 AERLVWAC 102
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 1 AQRIPWSC 8
+QR+ W+C
Sbjct: 92 SQRLVWAC 99
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 1 AQRIPWSC 8
A+R+ W+C
Sbjct: 95 AERLVWAC 102
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 96 QRLVWAC 102
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 2 QRIPWSC 8
+R+ WSC
Sbjct: 97 ERLVWSC 103
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 125 QRLVWAC 131
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 1 AQRIPWSC 8
A+R+ W+C
Sbjct: 123 AERLVWAC 130
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 94 QRLVWAC 100
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 126 QRLVWAC 132
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 94 QRLVWAC 100
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 93 QRLVWAC 99
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 123 QRLVWAC 129
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 112 QRLLWAC 118
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 97 QRLVWAC 103
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 111 QRLLWAC 117
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 93 QRLVWAC 99
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 93 QRLVWAC 99
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 93 QRLVWAC 99
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 97 QRLVWAC 103
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 2 QRIPWSC 8
QR+ W C
Sbjct: 122 QRLVWGC 128
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 95 QRMVWAC 101
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 157 QRLVWAC 163
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 96 QRLVWAC 102
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 96 QRMVWAC 102
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 96 QRLVWAC 102
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 93 QRLVWAC 99
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 96 QRLVWAC 102
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 123 QRLVWAC 129
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 205 QRLLWAC 211
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 95 QRMVWAC 101
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 2 QRIPWSC 8
QR+ W+C
Sbjct: 93 QRLVWAC 99
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 6 WSCES 10
WSCES
Sbjct: 338 WSCES 342
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 6 WSCES 10
WSCES
Sbjct: 331 WSCES 335
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 AQRIPWSCES 10
AQR WS +S
Sbjct: 314 AQRSAWSHKS 323
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 QRIPW 6
+RIPW
Sbjct: 797 ERIPW 801
>sp|VE8E2_HPV28|PROTEIN E8^E2C|Human papillomavirus 28
Query: 6 WSCES 10
WSCES
Sbjct: 131 WSCES 135
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 2 QRIP--WSCES 10
QRI WSC S
Sbjct: 1085 QRIGRVWSCSS 1095
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 QRIP--WSCES 10
QRI WSC S
Sbjct: 1086 QRIGRVWSCSS 1096
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 3 RIPWSCE 9
R+ W+C+
Sbjct: 98 RLVWACK 104
27|SequenceR|140|131|NHLSPAQRIP
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NHLSPAQRIP 10
NH+SPA +P
Sbjct: 1927 NHVSPAHYVP 1936
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 NHLSPAQRIP 10
NH+SPA +P
Sbjct: 1933 NHVSPAHYVP 1942
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1927 NHVSPTHYVP 1936
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1927 NHVSPTHYVP 1936
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1927 NHVSPTHYVP 1936
Query: 1 NHLSPAQ 7
NHLSP Q
Sbjct: 951 NHLSPLQ 957
Query: 4 SPAQRI 9
SPAQR+
Sbjct: 2616 SPAQRV 2621
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1927 NHVSPTHYVP 1936
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1927 NHVSPTHYVP 1936
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1927 NHVSPTHYVP 1936
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1932 NHVSPTHYVP 1941
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1927 NHVSPTHYVP 1936
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1927 NHVSPTHYVP 1936
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1927 NHVSPTHYVP 1936
Query: 1 NHLSPAQ 7
NHLSP Q
Sbjct: 951 NHLSPLQ 957
Query: 4 SPAQRI 9
SPAQR+
Sbjct: 2616 SPAQRV 2621
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1927 NHVSPTHYVP 1936
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1925 NHVSPTHYVP 1934
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1932 NHVSPTHYVP 1941
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1928 NHVSPTHYVP 1937
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1927 NHVSPTHYVP 1936
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1927 NHVSPTHYVP 1936
Query: 4 SPAQRI 9
SPAQR+
Sbjct: 2613 SPAQRV 2618
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1935 NHVSPTHYVP 1944
Query: 1 NHLSPAQ 7
+HLSP Q
Sbjct: 959 DHLSPIQ 965
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1933 NHVSPTHYVP 1942
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1928 NHVSPTHYVP 1937
Query: 4 SPAQRI 9
SPAQR+
Sbjct: 2619 SPAQRV 2624
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1931 NHVSPTHYVP 1940
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1931 NHVSPTHYVP 1940
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 NHLSPAQRIP 10
NH+SP +P
Sbjct: 1929 NHVSPTHYVP 1938
>sp|PG082_MONPV|TELOMERE-BINDING protein OPG082|Monkeypox virus (MPXV)
Query: 1 NHLSPAQRIP 10
+++SP +R+P
Sbjct: 191 SYISPKERLP 200
>sp|PG082_VARV|TELOMERE-BINDING protein OPG082|Variola virus
Query: 1 NHLSPAQRIP 10
+++SP +R+P
Sbjct: 191 SYISPKERLP 200
>sp|PG082_VAR67|TELOMERE-BINDING protein OPG082|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 NHLSPAQRIP 10
+++SP +R+P
Sbjct: 191 SYISPKERLP 200
>sp|PG082_VACCC|TELOMERE-BINDING protein OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NHLSPAQRIP 10
+++SP +R+P
Sbjct: 191 SYISPKERLP 200
>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HLSPAQRIP 10
H PA R+P
Sbjct: 163 HCRPASRLP 171
>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HLSPAQRIP 10
H PA R+P
Sbjct: 163 HCRPASRLP 171
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 2 HLSPAQR 8
HLSPA R
Sbjct: 177 HLSPASR 183
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NHLSPAQ 7
+H+SPAQ
Sbjct: 796 SHVSPAQ 802
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NHLSPAQ 7
+H+SPAQ
Sbjct: 796 SHVSPAQ 802
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 SPAQRI 9
SPAQR+
Sbjct: 2638 SPAQRV 2643
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 HLSPAQR 8
HL PAQ+
Sbjct: 54 HLEPAQK 60
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 4 SPAQRI 9
SPAQR+
Sbjct: 2638 SPAQRV 2643
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 SPAQRI 9
SPAQR+
Sbjct: 2642 SPAQRV 2647
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 HLSPAQR 8
HL P+QR
Sbjct: 53 HLEPSQR 59
>sp|UL148_HCMVM|MEMBRANE protein UL148|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LSPAQRIP 10
LSP R+P
Sbjct: 266 LSPKARLP 273
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 SPAQRI 9
SPAQR+
Sbjct: 2619 SPAQRV 2624
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 SPAQRI 9
SPAQR+
Sbjct: 2638 SPAQRV 2643
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 1 NHLSPAQRIP 10
NHL A R P
Sbjct: 86 NHLMIAARAP 95
>sp|VE7_HPV18|PROTEIN E7|Human papillomavirus type 18
Query: 2 HLSPAQRIP 10
HL P IP
Sbjct: 14 HLEPQNEIP 22
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 1 NHLSPAQRIP 10
NHL A R P
Sbjct: 86 NHLMIAARAP 95
28|SequenceR|145|136|CVAFLNHLSP
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VAFLNHLSP 10
+AF+N L+P
Sbjct: 194 IAFINRLTP 202
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 CVAFLNHL 8
C++F NHL
Sbjct: 6747 CLSFSNHL 6754
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 CVAFLNHLS 9
C+ FLN+++
Sbjct: 232 CITFLNNIA 240
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 1 CVAFLNHLS 9
C+ FLN+++
Sbjct: 232 CITFLNNIA 240
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 CVAFLNHLS 9
C+ FLN+++
Sbjct: 232 CITFLNNIA 240
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 2 VAFLNHLS 9
V+F+NHL+
Sbjct: 444 VSFVNHLN 451
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 CVAFLNHLS 9
C+ FLN+++
Sbjct: 232 CITFLNNIA 240
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 4 FLNHLSP 10
FL HL+P
Sbjct: 889 FLTHLNP 895
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 4 FLNHLSP 10
FL HL+P
Sbjct: 889 FLTHLNP 895
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 FLNHLSP 10
FL HL+P
Sbjct: 889 FLTHLNP 895
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 FLNHLSP 10
FL HL+P
Sbjct: 889 FLTHLNP 895
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 4 FLNHLSP 10
FL HL+P
Sbjct: 889 FLTHLNP 895
>sp|PRO_ADE12|PROTEASE adenovirus A serotype 12
Query: 4 FLNHLSP 10
FLN+LSP
Sbjct: 177 FLNNLSP 183
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CVAFLNHL 8
C +FL+HL
Sbjct: 186 CESFLHHL 193
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 1 CVAFLNHL 8
C +FL+HL
Sbjct: 186 CESFLHHL 193
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CVAFLNHL 8
C +FL+HL
Sbjct: 186 CESFLHHL 193
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 3 AFLNHL 8
AFLNH+
Sbjct: 311 AFLNHV 316
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 1 CVAFLNHL 8
C +FL+HL
Sbjct: 186 CESFLHHL 193
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 1 CVAFLNHL 8
C +FL+HL
Sbjct: 186 CESFLHHL 193
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VAFLNHLSP 10
V L+H+SP
Sbjct: 792 VGMLSHVSP 800
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VAFLNHLSP 10
V L+H+SP
Sbjct: 792 VGMLSHVSP 800
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 6 NHLSP 10
NHLSP
Sbjct: 951 NHLSP 955
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 6 NHLSP 10
NHLSP
Sbjct: 951 NHLSP 955
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 AFLNH 7
AFLNH
Sbjct: 303 AFLNH 307
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 AFLNH 7
AFLNH
Sbjct: 303 AFLNH 307
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 AFLNH 7
AFLNH
Sbjct: 303 AFLNH 307
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 5 LNHLSP 10
L HLSP
Sbjct: 1387 LTHLSP 1392
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 5 LNHLSP 10
L HLSP
Sbjct: 1387 LTHLSP 1392
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 CVAFLN 6
C+ FLN
Sbjct: 318 CIQFLN 323
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 4 FLNHLS 9
FL+HLS
Sbjct: 762 FLHHLS 767
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 4 FLNHLS 9
FL+HLS
Sbjct: 762 FLHHLS 767
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 4 FLNHLS 9
FL+HLS
Sbjct: 762 FLHHLS 767
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 1 CVAFLNHL 8
C FL+HL
Sbjct: 186 CELFLHHL 193
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 CVAFLNHL 8
C A++N+L
Sbjct: 560 CKAYMNNL 567
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 2 VAFLNHLSP 10
++FL HL P
Sbjct: 369 LSFLFHLHP 377
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 CVAFLNHLS 9
C AF+N S
Sbjct: 661 CAAFVNDYS 669
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 CVAFLNHLS 9
C AF+N S
Sbjct: 661 CAAFVNDYS 669
>sp|ORF2_TTVV3|ORF2 protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 CVAFLNHLS 9
C+ L HL+
Sbjct: 33 CIGHLQHLA 41
>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VAFLNH 7
VAFLN+
Sbjct: 308 VAFLNY 313
>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VAFLNH 7
VAFLN+
Sbjct: 308 VAFLNY 313
29|SequenceR|150|141|NYMNRCVAFL
>sp|M1_INBYA|MATRIX protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 3 MNRCVAF 9
M RCV+F
Sbjct: 103 MRRCVSF 109
>sp|M1_INBSI|MATRIX protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 3 MNRCVAF 9
M RCV+F
Sbjct: 103 MRRCVSF 109
>sp|M1_INBMP|MATRIX protein 1|Influenza B virus (strain B/Memphis/12/1997)
Query: 3 MNRCVAF 9
M RCV+F
Sbjct: 103 MRRCVSF 109
>sp|M1_INBLE|MATRIX protein 1|Influenza B virus (strain B/Lee/1940)
Query: 3 MNRCVAF 9
M RCV+F
Sbjct: 103 MRRCVSF 109
>sp|M1_INBAD|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 3 MNRCVAF 9
M RCV+F
Sbjct: 103 MRRCVSF 109
>sp|M1_INBAC|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 3 MNRCVAF 9
M RCV+F
Sbjct: 103 MRRCVSF 109
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1916 WMNRLIAF 1923
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1917 WMNRLIAF 1924
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1913 WMNRLIAF 1920
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1919 WMNRLIAF 1926
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1915 WMNRLIAF 1922
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1923 WMNRLIAF 1930
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1920 WMNRLIAF 1927
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1916 WMNRLIAF 1923
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1915 WMNRLIAF 1922
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1921 WMNRLIAF 1928
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1921 WMNRLIAF 1928
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1915 WMNRLIAF 1922
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1919 WMNRLIAF 1926
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1919 WMNRLIAF 1926
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1920 WMNRLIAF 1927
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1919 WMNRLIAF 1926
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1915 WMNRLIAF 1922
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1919 WMNRLIAF 1926
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1919 WMNRLIAF 1926
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1915 WMNRLIAF 1922
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1915 WMNRLIAF 1922
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1915 WMNRLIAF 1922
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1915 WMNRLIAF 1922
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1916 WMNRLIAF 1923
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1919 WMNRLIAF 1926
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1915 WMNRLIAF 1922
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1915 WMNRLIAF 1922
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1915 WMNRLIAF 1922
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1919 WMNRLIAF 1926
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1915 WMNRLIAF 1922
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1920 WMNRLIAF 1927
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 YMNRCVAF 9
+MNR +AF
Sbjct: 1915 WMNRLIAF 1922
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 NYMNRC 6
NY NRC
Sbjct: 653 NYCNRC 658
>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 NYMNRC 6
+Y+NRC
Sbjct: 253 HYLNRC 258
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NYMNRC 6
N+ NRC
Sbjct: 556 NHANRC 561
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NYMNRC 6
N+ NRC
Sbjct: 556 NHANRC 561
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 4 NRCVAFL 10
+RC AF+
Sbjct: 2360 SRCAAFI 2366
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 1 NYMNRCV 7
+++NRCV
Sbjct: 330 SFVNRCV 336
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 NYMNRC 6
+Y NRC
Sbjct: 653 DYCNRC 658
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 NYMNRC 6
+Y NRC
Sbjct: 653 DYCNRC 658
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 NYMNRC 6
+Y NRC
Sbjct: 653 DYCNRC 658
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 NYMNRC 6
+Y NRC
Sbjct: 653 DYCNRC 658
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 NYMNRCV 7
+++NRCV
Sbjct: 330 SFVNRCV 336
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 1 NYMNRCV 7
+++NRCV
Sbjct: 330 SFVNRCV 336
30|SequenceR|155|146|NQLLWNYMNR
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 LLWNYM 8
LLW+YM
Sbjct: 1687 LLWDYM 1692
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 LLWNYM 8
LLW+YM
Sbjct: 1686 LLWDYM 1691
>sp|MATRX_VSNJO|MATRIX protein|Vesicular stomatitis New Jersey virus
Query: 4 LWNYMN 9
+W+YMN
Sbjct: 189 VWDYMN 194
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 LWNYM 8
LWNY+
Sbjct: 3586 LWNYL 3590
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 LWNYM 8
LWNY+
Sbjct: 3586 LWNYL 3590
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 LWNYMN 9
LW Y+N
Sbjct: 1252 LWQYLN 1257
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 LWNYMN 9
LW Y+N
Sbjct: 1252 LWQYLN 1257
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 LWNYMN 9
LW Y+N
Sbjct: 1252 LWQYLN 1257
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 LWNYMN 9
LW Y+N
Sbjct: 1252 LWKYLN 1257
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 LWNYMN 9
LW Y+N
Sbjct: 1252 LWKYLN 1257
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 LWNYMN 9
LW Y+N
Sbjct: 1252 LWKYLN 1257
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 LWNYMN 9
LW Y+N
Sbjct: 1252 LWKYLN 1257
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 LWNYMN 9
LW Y+N
Sbjct: 1252 LWKYLN 1257
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 5 WNYMN 9
WNYM+
Sbjct: 512 WNYMD 516
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 LWNYMN 9
LW Y+N
Sbjct: 1252 LWKYLN 1257
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 4 LWNYM 8
LW+YM
Sbjct: 1939 LWDYM 1943
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 NQLLWNYMNR 10
++ LW +NR
Sbjct: 2887 SEWLWKRLNR 2896
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QLLWNYMN 9
QLL++Y N
Sbjct: 669 QLLFHYRN 676
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QLLWNYMN 9
QLL++Y N
Sbjct: 669 QLLFHYRN 676
31|SequenceR|160|151|CVNKPNQLLW
>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)
Query: 5 PNQLLW 10
PN+LLW
Sbjct: 291 PNRLLW 296
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 3 NKPNQLLW 10
N PN+ LW
Sbjct: 1256 NGPNKDLW 1263
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 3 NKPNQLLW 10
N P ++LW
Sbjct: 70 NAPGEILW 77
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 CVNKPNQLLW 10
CV + LLW
Sbjct: 2181 CVTASSALLW 2190
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 5 PNQLLW 10
PN L+W
Sbjct: 154 PNPLVW 159
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 PNQLLW 10
PN L+W
Sbjct: 154 PNPLVW 159
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 1 CVNKPNQLLW 10
CVN+ +L W
Sbjct: 450 CVNESVRLGW 459
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 VNKPN 6
VNKPN
Sbjct: 793 VNKPN 797
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CVNKPNQLLW 10
CVN+ +L W
Sbjct: 450 CVNESVRLGW 459
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 1 CVNKPNQL 8
C N PN+L
Sbjct: 530 CFNFPNKL 537
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 NKPNQLLW 10
NKP ++W
Sbjct: 182 NKPALIVW 189
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 NKPNQLLW 10
+KPN + W
Sbjct: 582 SKPNIITW 589
>sp|GL_HHV7J|ENVELOPE glycoprotein L|Human herpesvirus 7 (strain JI)
Query: 3 NKPNQL 8
N PNQL
Sbjct: 94 NNPNQL 99
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 VNKPNQL 8
+ KPN+L
Sbjct: 2084 IKKPNEL 2090
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 VNKPNQL 8
+ KPN+L
Sbjct: 2084 IKKPNEL 2090
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 VNKPNQL 8
+ KPN+L
Sbjct: 2107 IKKPNEL 2113
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 VNKPNQL 8
+ KPN+L
Sbjct: 2107 IKKPNEL 2113
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 1 CVNKPNQL 8
C N PN++
Sbjct: 536 CFNFPNKM 543
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 1 CVNKPNQLLW 10
CV + +LW
Sbjct: 131 CVKTEDAILW 140
32|SequenceR|165|156|LCHVVCVNKP
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 2 CHVVCVNK 9
CH +C+ K
Sbjct: 280 CHAICIFK 287
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LCHVVCVN 8
+CHV C N
Sbjct: 146 ICHVACGN 153
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 LCHVVCVN 8
+CHV C N
Sbjct: 146 ICHVACGN 153
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 LCHVVC 6
LCHV C
Sbjct: 176 LCHVQC 181
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 LCHVVCVNK 9
L H +C+NK
Sbjct: 469 LNHFICLNK 477
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 1 LCHVVCV 7
LCHV C+
Sbjct: 44 LCHVYCM 50
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LCHVVCV 7
LCHV C+
Sbjct: 44 LCHVYCM 50
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 CHVVCVN 8
CH+ C+N
Sbjct: 352 CHLECIN 358
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LCHVVC 6
LCH++C
Sbjct: 279 LCHLLC 284
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LCHVVC 6
LCH++C
Sbjct: 279 LCHLLC 284
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 LCHVVCVNKP 10
LCH++ N P
Sbjct: 2109 LCHLMWHNGP 2118
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 LCHVVCVNK 9
+CH VN+
Sbjct: 1755 MCHATYVNR 1763
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 LCHVVCVNK 9
+CH VN+
Sbjct: 1755 MCHATYVNR 1763
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 LCHVVCVNK 9
+CH VN+
Sbjct: 1755 MCHATYVNR 1763
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 LCHVVCVNK 9
+CH VN+
Sbjct: 1756 MCHATYVNR 1764
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 LCHVVCVNK 9
+CH VN+
Sbjct: 1755 MCHATYVNR 1763
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 LCHVVCVNK 9
+CH VN+
Sbjct: 1755 MCHATYVNR 1763
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 LCHVVCVNK 9
+CH VN+
Sbjct: 1755 MCHATYVNR 1763
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 LCHVVCVNK 9
+CH VN+
Sbjct: 1755 MCHATYVNR 1763
>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)
Query: 5 VCVNKP 10
VCV KP
Sbjct: 425 VCVEKP 430
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 5 VCVNKP 10
VCV KP
Sbjct: 424 VCVEKP 429
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 2 CHVVC 6
CH++C
Sbjct: 219 CHLLC 223
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 1 LCHVVCV 7
LC VCV
Sbjct: 717 LCEKVCV 723
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LCHVVCV 7
LC VCV
Sbjct: 717 LCEKVCV 723
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LCHVVCV 7
LC VCV
Sbjct: 717 LCEKVCV 723
33|SequenceR|170|161|AARGDLCHVV
>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)
Query: 3 RGDLCHV 9
RGD+C +
Sbjct: 137 RGDMCDI 143
>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)
Query: 3 RGDLCHV 9
RGD+C +
Sbjct: 137 RGDMCDI 143
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 AARGDLCHVV 10
AARG LC +
Sbjct: 1158 AARGYLCEAM 1167
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 AARGDLCHVV 10
AARG LC +
Sbjct: 1158 AARGYLCEAM 1167
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 AARGDLCHVV 10
AARG LC +
Sbjct: 1158 AARGYLCEAM 1167
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 AARGDLCHV 9
A +G+LC V
Sbjct: 400 AGKGELCAV 408
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 AARGDLCHV 9
A +G+LC V
Sbjct: 400 AGKGELCAV 408
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 AARGDLCHV 9
A +G+LC V
Sbjct: 400 AGKGELCAV 408
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 3 RGDLCHV 9
RGD+ H+
Sbjct: 287 RGDVTHI 293
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 ARGDLC 7
++GDLC
Sbjct: 2686 SKGDLC 2691
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 6 LCHVV 10
LCHV+
Sbjct: 2500 LCHVI 2504
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 3 RGDLCHV 9
+GDL H+
Sbjct: 420 KGDLLHI 426
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 4 GDLCHVV 10
GDL H+V
Sbjct: 1210 GDLLHLV 1216
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 2 ARGDLCHVV 10
+RG +CH +
Sbjct: 297 SRGWVCHPI 305
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 2 ARGDLCHVV 10
+RG +CH +
Sbjct: 297 SRGWVCHPI 305
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 2 ARGDLCHVV 10
+RG +CH +
Sbjct: 297 SRGWVCHPI 305
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 2 ARGDLCHVV 10
+RG +CH +
Sbjct: 297 SRGWVCHPI 305
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 2 ARGDLCHVV 10
+RG +CH +
Sbjct: 297 SRGWVCHPI 305
34|SequenceR|175|166|VLISSAARGD
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 VLISSAARGD 10
VLI S A+GD
Sbjct: 207 VLIPSHAQGD 216
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 5 SAARGD 10
SAARGD
Sbjct: 1695 SAARGD 1700
35|SequenceR|180|171|IFMAGVLISS
>sp|MC007_MCV1|PROTEIN MC007|Molluscum contagiosum virus subtype 1
Query: 2 FMAGVLISS 10
F+AG L+SS
Sbjct: 32 FVAGALVSS 40
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 2 FMAGVLIS 9
FM GV+IS
Sbjct: 504 FMGGVVIS 511
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 1 IFMAGVLISS 10
+FM GVL+ +
Sbjct: 5 LFMVGVLLGA 14
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 2 FMAGVLISS 10
F+AG+L+++
Sbjct: 284 FLAGLLLAT 292
36|SequenceR|185|176|YLNCFIFMAG
>sp|GL_HHV1K|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain KOS)
Query: 1 YLNCFIFMAG 10
++N F+F+AG
Sbjct: 93 WVNPFLFVAG 102
>sp|GL_HHV11|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain 17)
Query: 1 YLNCFIFMAG 10
++N F+F+AG
Sbjct: 93 WVNPFLFVAG 102
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 LNCFIF 7
LNCFI+
Sbjct: 843 LNCFIW 848
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 3 NCFIFMA 9
+CF+F+A
Sbjct: 543 SCFLFLA 549
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 3 NCFIFMA 9
+CF+F+A
Sbjct: 543 SCFLFLA 549
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 3 NCFIFMA 9
+CF+F+A
Sbjct: 543 SCFLFLA 549
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 3 NCFIFMA 9
+CF+F+A
Sbjct: 543 SCFLFLA 549
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 3 NCFIFMA 9
+CF+F+A
Sbjct: 543 SCFLFLA 549
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 3 NCFIFMA 9
+CF+F+A
Sbjct: 543 SCFLFLA 549
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 3 NCFIFMA 9
+CF+F+A
Sbjct: 543 SCFLFLA 549
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 3 NCFIFMA 9
+CF+F+A
Sbjct: 543 SCFLFLA 549
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 3 NCFIFMA 9
+CF+F+A
Sbjct: 543 SCFLFLA 549
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 3 NCFIFMA 9
+CF+F+A
Sbjct: 543 SCFLFLA 549
>sp|VIF_HV1YB|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 YLNCF 5
Y NCF
Sbjct: 111 YFNCF 115
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 YLNCFIFM 8
YL CF ++
Sbjct: 1023 YLECFKYL 1030
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 LNCFIFMA 9
+ CF+++A
Sbjct: 1 MKCFLYLA 8
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 LNCFIFMAG 10
+ C + MAG
Sbjct: 1309 VRCLLIMAG 1317
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 LNCFIFMAG 10
+NC +M G
Sbjct: 151 VNCQFYMTG 159
37|SequenceR|190|181|PGPTSYLNCF
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 4 TSYLNCF 10
T YL CF
Sbjct: 1021 TDYLECF 1027
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 GPTSYLN 8
GP S+LN
Sbjct: 1012 GPVSHLN 1018
Query: 4 TSYLNC 9
T+Y NC
Sbjct: 565 TTYTNC 570
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 PGPTSYLN 8
P PT +LN
Sbjct: 1019 PSPTDWLN 1026
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 PGPTSY 6
PGP+SY
Sbjct: 36 PGPSSY 41
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 PGPTSY 6
PGP+SY
Sbjct: 36 PGPSSY 41
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 PGPTSY 6
PGP+SY
Sbjct: 36 PGPSSY 41
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PG---PTSYLN 8
PG PTSYL+
Sbjct: 2261 PGVVSPTSYLD 2271
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PG---PTSYLN 8
PG PTSYL+
Sbjct: 2261 PGVVSPTSYLD 2271
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PG---PTSYLN 8
PG PTSYL+
Sbjct: 2261 PGVVSPTSYLD 2271
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PG---PTSYLN 8
PG PTSYL+
Sbjct: 2261 PGVVSPTSYLD 2271
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PG---PTSYLN 8
PG PTSYL+
Sbjct: 2261 PGVVSPTSYLD 2271
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 PGPTSY 6
PGP+SY
Sbjct: 36 PGPSSY 41
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 PGPTSY 6
PGP+SY
Sbjct: 36 PGPSSY 41
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 PGPTSY 6
PGP+SY
Sbjct: 36 PGPSSY 41
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 PGPTSY 6
PGP+SY
Sbjct: 36 PGPSSY 41
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 PGPTSY 6
PGP+SY
Sbjct: 36 PGPSSY 41
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PGPTSY 6
P PTSY
Sbjct: 451 PQPTSY 456
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain
Query: 2 GPTSYLNCF 10
GP S L+C
Sbjct: 25 GPASGLSCL 33
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 PGPTSY 6
PGP+SY
Sbjct: 36 PGPSSY 41
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 GPTSYLNCF 10
GP S L+C
Sbjct: 25 GPASGLSCL 33
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 PGPTSYLNC 9
P P S ++C
Sbjct: 1460 PDPVSEIDC 1468
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 PGPTSYLNC 9
P P S ++C
Sbjct: 1460 PDPVSEIDC 1468
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 PGPTSY 6
PGP+SY
Sbjct: 36 PGPSSY 41
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GPTSYLNCF 10
GP + CF
Sbjct: 386 GPRKIIKCF 394
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 GPTSYLN 8
GP SY+N
Sbjct: 469 GPISYVN 475
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 PGPTSYLNC 9
PG S L C
Sbjct: 16 PGTVSALEC 24
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PGPTSYL 7
P P SYL
Sbjct: 593 PHPVSYL 599
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GPTSYLNCF 10
GP + CF
Sbjct: 387 GPRKTIKCF 395
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 GPTSYLN 8
GP YLN
Sbjct: 803 GPKQYLN 809
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 PGPTSYLNCF 10
PG Y++C
Sbjct: 432 PGDQLYVDCL 441
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PGPTSYL 7
P P SYL
Sbjct: 593 PHPVSYL 599
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GPTSYLNCF 10
GP + CF
Sbjct: 383 GPRKSIKCF 391
>sp|VIF_HV2UC|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 5 SYLNCF 10
SY +CF
Sbjct: 112 SYFSCF 117
>sp|MB43_HHV11|MEMBRANE protein UL43|Human herpesvirus 1 (strain 17)
Query: 1 PGPTSYLNCF 10
PG T+ +CF
Sbjct: 193 PGATTARDCF 202
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GPTSYLNCF 10
GP + CF
Sbjct: 386 GPRRIIKCF 394
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 PGPTSYLN 8
P P Y+N
Sbjct: 596 PAPLDYVN 603
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 GPTSYLNCF 10
GP + CF
Sbjct: 386 GPRKIIKCF 394
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 2 GPTSYLNCF 10
G SYLN F
Sbjct: 468 GFLSYLNAF 476
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 PGPTSYLNC 9
P T+YL C
Sbjct: 514 PAGTNYLTC 522
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 GPTSYLNCF 10
GP + CF
Sbjct: 387 GPRKTIKCF 395
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 GPTSYLNCF 10
GP + CF
Sbjct: 383 GPRKSIKCF 391
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 PGPTSYLN 8
PG T Y N
Sbjct: 1828 PGDTVYYN 1835
>sp|VIF_HV2D2|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 5 SYLNCF 10
SY +CF
Sbjct: 112 SYFSCF 117
>sp|E3B14_ADE03|EARLY E3B 14.5 kDa protein|Human adenovirus B serotype 3
Query: 3 PTSYLNCF 10
P S+L+C+
Sbjct: 38 PWSFLDCY 45
>sp|E3B14_ADE07|EARLY E3B 14.9 kDa protein|Human adenovirus B serotype 7
Query: 3 PTSYLNCF 10
P S+L+C+
Sbjct: 38 PWSFLDCY 45
38|SequenceR|195|186|LLRIAPGPTS
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 LLRIAPGP 8
LLR APGP
Sbjct: 846 LLRTAPGP 853
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 1 LLRIAPGP 8
LLR APGP
Sbjct: 846 LLRTAPGP 853
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 LLRIAPGP 8
LLR APGP
Sbjct: 846 LLRTAPGP 853
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 LLRIAPGP 8
LLR APGP
Sbjct: 846 LLRTAPGP 853
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 LLRIAPGP 8
LLR APGP
Sbjct: 846 LLRTAPGP 853
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 LLRIAPGP 8
LLR APGP
Sbjct: 846 LLRTAPGP 853
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 LLRIAPGP 8
LLR APGP
Sbjct: 846 LLRTAPGP 853
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 LLRIAPGP 8
LLR APGP
Sbjct: 846 LLRTAPGP 853
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 LLRIAPGP 8
LLR APGP
Sbjct: 846 LLRTAPGP 853
>sp|PHOSP_RABVA|PHOSPHOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 3 RIAPGPTS 10
++APGP +
Sbjct: 176 QVAPGPPA 183
>sp|PHOSP_RABVC|PHOSPHOPROTEIN virus (strain CVS-11) (RABV)
Query: 3 RIAPGPTS 10
++APGP +
Sbjct: 176 QVAPGPPA 183
>sp|PHOSP_RABVR|PHOSPHOPROTEIN virus (strain China/MRV) (RABV)
Query: 3 RIAPGPTS 10
++APGP +
Sbjct: 176 QVAPGPPA 183
>sp|GN_HHV8P|ENVELOPE glycoprotein N|Human herpesvirus 8 type P
Query: 3 RIAPGPTS 10
R +PGPTS
Sbjct: 45 RPSPGPTS 52
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 RIAPGPTS 10
R+ PGP+S
Sbjct: 33 RLEPGPSS 40
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 RIAPGPTS 10
R+ PGP+S
Sbjct: 33 RLEPGPSS 40
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 4 IAPGPT 9
I PGPT
Sbjct: 120 IVPGPT 125
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 RIAPGPTS 10
R+ PGP+S
Sbjct: 33 RLEPGPSS 40
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 RIAPGPTS 10
R+ PGP+S
Sbjct: 33 RLEPGPSS 40
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 RIAPGPTS 10
R+ PGP+S
Sbjct: 33 RLEPGPSS 40
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 RIAPGPTS 10
R+ PGP+S
Sbjct: 33 RLEPGPSS 40
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 RIAPGPTS 10
R+ PGP+S
Sbjct: 33 RLEPGPSS 40
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LRIAPGPT 9
+RI PG T
Sbjct: 307 IRIGPGQT 314
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LRIAPGPT 9
+RI PG T
Sbjct: 304 IRIGPGQT 311
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 RIAPGPTS 10
R+ PGP+S
Sbjct: 33 RLEPGPSS 40
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 RIAPGPTS 10
R+ PGP+S
Sbjct: 33 RLEPGPSS 40
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 RIAPGPTS 10
R+ PGP+S
Sbjct: 33 RLEPGPSS 40
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 1 LLRIAPGPT 9
+L +AP PT
Sbjct: 162 ILEVAPEPT 170
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 1 LLRIAPGPT 9
+L +AP PT
Sbjct: 162 ILEVAPEPT 170
>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14
Query: 1 LLRIAPGPT 9
+L +AP PT
Sbjct: 162 ILEVAPEPT 170
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 1 LLRIAPGPT 9
+L +AP PT
Sbjct: 162 VLEVAPEPT 170
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 1 LLRIAPGPT 9
+L +AP PT
Sbjct: 162 VLEVAPEPT 170
>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25
Query: 1 LLRIAPGPT 9
+L +AP PT
Sbjct: 161 VLEVAPEPT 169
39|SequenceR|200|191|PRKAYLLRIA
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 RKAYLLR 8
RK+YL+R
Sbjct: 214 RKSYLIR 220
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 PRKAYL 6
P+KAYL
Sbjct: 4260 PQKAYL 4265
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 PRKAYL 6
P+KAYL
Sbjct: 4260 PQKAYL 4265
>sp|CAP8_ADE41|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 41
Query: 1 PRKAYL 6
PR+AYL
Sbjct: 170 PRQAYL 175
>sp|CAP8_ADE40|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 40
Query: 1 PRKAYL 6
PR+AYL
Sbjct: 170 PRQAYL 175
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 PRKAYLL 7
P K+YLL
Sbjct: 1745 PAKSYLL 1751
40|SequenceR|205|196|SLGIGPRKAY
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 3 GIGPRKAY 10
GI PR AY
Sbjct: 1361 GIAPRNAY 1368
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 3 GIGPRKAY 10
GI PR AY
Sbjct: 1361 GIAPRNAY 1368
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 3 GIGPRKAY 10
GIGP K Y
Sbjct: 408 GIGPAKTY 415
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LGI P KA
Sbjct: 492 LGIAPTKA 499
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LGI P KA
Sbjct: 487 LGIAPTKA 494
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SLGIGPRKA 9
+LG+ P KA
Sbjct: 491 TLGVAPTKA 499
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 LGIGPR 7
LG+GPR
Sbjct: 433 LGLGPR 438
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 494 LGVAPTKA 501
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 493 LGVAPTKA 500
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 481 LGVAPTKA 488
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 484 LGVAPTKA 491
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 493 LGVAPTKA 500
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 470 LGVAPTKA 477
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 493 LGVAPTKA 500
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 488 LGVAPTKA 495
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 489 LGVAPTKA 496
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 486 LGVAPTKA 493
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 485 LGVAPTKA 492
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 492 LGVAPTKA 499
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 496 LGVAPTKA 503
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 496 LGVAPTKA 503
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 488 LGVAPTKA 495
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 494 LGVAPTKA 501
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 486 LGVAPTKA 493
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 506 LGVAPTKA 513
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 494 LGVAPTKA 501
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 494 LGVAPTKA 501
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 505 LGVAPTKA 512
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 499 LGVAPTKA 506
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 490 LGVAPTKA 497
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 489 LGVAPTKA 496
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 494 LGVAPTKA 501
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LGIGPRKA 9
LG+ P KA
Sbjct: 484 LGVAPTKA 491
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 LGIGPR 7
LG+GPR
Sbjct: 433 LGMGPR 438
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 1 SLGIGPRKAY 10
SLGI +K Y
Sbjct: 298 SLGIHKKKEY 307
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SLGIGPRKAY 10
SLGI +K Y
Sbjct: 298 SLGIHKKKEY 307
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SLGIGPRKAY 10
SLGI +K Y
Sbjct: 298 SLGIHKKKEY 307
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 SLGIGPRKAY 10
SLGI +K Y
Sbjct: 298 SLGIHKKKEY 307
>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)
Query: 1 SLGIGPRKAY 10
SLGI +K Y
Sbjct: 300 SLGIHKKKEY 309
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SLGIGPRKAY 10
S+ +GP KA+
Sbjct: 308 SIHMGPGKAF 317
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 1 SLGIGPRKA 9
+ +GPRKA
Sbjct: 718 TFKLGPRKA 726
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 1 SLGIGPRKA 9
+ +GPRKA
Sbjct: 718 TFKLGPRKA 726
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 LGIGP 6
LGIGP
Sbjct: 273 LGIGP 277
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 LGIGPR 7
LG+GP+
Sbjct: 928 LGVGPQ 933
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 LGIGPR 7
LG+GP+
Sbjct: 927 LGVGPQ 932
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 LGIGPR 7
LG+GP+
Sbjct: 927 LGVGPQ 932
>sp|NCAP_CVHNL|NUCLEOPROTEIN coronavirus NL63 (HCoV-NL63)
Query: 2 LGIGPRK 8
LG GP K
Sbjct: 81 LGTGPHK 87
41|SequenceR|210|201|RRHSPSLGIG
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 1 RRHSPSLGIG 10
R H+P G+G
Sbjct: 14 REHTPERGMG 23
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 RHSPSL 7
RH+PSL
Sbjct: 860 RHNPSL 865
>sp|PG110_VACCC|LATE transcription elongation factor OPG110|Vaccinia virus (strain
Query: 2 RHSPSLGIG 10
++SPS G+G
Sbjct: 87 KNSPSPGVG 95
>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 366 RRYGPALSI 374
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 3 HSPSLGI 9
H P LGI
Sbjct: 545 HCPGLGI 551
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 3 HSPSLGI 9
H P LGI
Sbjct: 545 HCPGLGI 551
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 RRHSPSLGI 9
RR+ P+L I
Sbjct: 702 RRYGPALSI 710
>sp|US16_HCMVM|PROTEIN US16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 HSPSLGI 9
H P+LG+
Sbjct: 138 HIPALGV 144
>sp|YVAB_VACCC|UNCHARACTERIZED 10.7 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RRHSPSL 7
RRH P+L
Sbjct: 18 RRHLPNL 24
>sp|US16_HCMVA|UNCHARACTERIZED protein HVLF2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 HSPSLGI 9
H P+LG+
Sbjct: 138 HIPALGV 144
42|SequenceR|215|206|MYGLYRRHSP
>sp|E310_ADE12|EARLY E3B 10.4 kDa protein|Human adenovirus A serotype 12
Query: 4 LYRRHSP 10
+YRRH P
Sbjct: 70 VYRRHHP 76
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 GLYRRHSP 10
G Y +HSP
Sbjct: 150 GTYTQHSP 157
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 GLYRRH 8
GLYR H
Sbjct: 702 GLYRYH 707
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 2 YGLYRR 7
YGLY R
Sbjct: 247 YGLYSR 252
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 2 YGLYRR 7
YGLY R
Sbjct: 239 YGLYSR 244
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 2 YGLYRR 7
YGLY R
Sbjct: 239 YGLYSR 244
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 2 YGLYRR 7
YGLY R
Sbjct: 239 YGLYSR 244
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 GLYRRH 8
GLYR H
Sbjct: 768 GLYRYH 773
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 GLYRRH 8
GLYR H
Sbjct: 768 GLYRYH 773
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 GLYRRH 8
GLYR H
Sbjct: 768 GLYRYH 773
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 5 YRRHSP 10
YR H P
Sbjct: 7 YRHHGP 12
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 GLYRRHSP 10
G YR +SP
Sbjct: 1514 GAYRIYSP 1521
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 GLYRRHSP 10
G YR +SP
Sbjct: 1514 GAYRIYSP 1521
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 YGLYRRHS 9
+GLY RH
Sbjct: 129 HGLYSRHD 136
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YGLYRRHS 9
+GLY RH
Sbjct: 129 HGLYSRHD 136
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 1 MYGLYR 6
++GLYR
Sbjct: 684 LFGLYR 689
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 3 GLYRRHS 9
G YR HS
Sbjct: 312 GAYREHS 318
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GLYRRHS 9
G YR HS
Sbjct: 312 GAYREHS 318
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 1 MYGLYRR 7
+YGL+R+
Sbjct: 247 VYGLFRQ 253
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YGLYRRHSP 10
YG Y R +P
Sbjct: 142 YGFYARVTP 150
43|SequenceR|220|211|ALLDCMYGLY
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 LLDCMYGLY 10
++DC+ GLY
Sbjct: 122 IVDCVTGLY 130
>sp|VEGFH_ORFN7|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ7) (OV
Query: 1 ALLDCMYGL 9
ALL CMY L
Sbjct: 12 ALLICMYNL 20
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LDCMYGLY 10
L CMY Y
Sbjct: 430 LSCMYAAY 437
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 5 CMYGLY 10
C YGLY
Sbjct: 592 CAYGLY 597
Query: 2 LLDCM 6
LLDCM
Sbjct: 272 LLDCM 276
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 5 CMYGLY 10
C YGLY
Sbjct: 592 CAYGLY 597
Query: 2 LLDCM 6
LLDCM
Sbjct: 272 LLDCM 276
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 3 LDCMYGL 9
+DC++G+
Sbjct: 481 MDCLFGI 487
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 LDCMYGL 9
+DC++G+
Sbjct: 481 MDCLFGI 487
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 3 LDCMYGL 9
+DC++G+
Sbjct: 481 MDCLFGI 487
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 1 ALLDCM 6
ALLDC+
Sbjct: 524 ALLDCL 529
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 1 ALLDCM 6
ALLDC+
Sbjct: 524 ALLDCL 529
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 LLDCMY 7
+LDCM+
Sbjct: 248 VLDCMF 253
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 ALLDCMYGLY 10
ALLD + G+Y
Sbjct: 2045 ALLDRLRGVY 2054
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 ALLDCMYGLY 10
ALLD + G+Y
Sbjct: 2045 ALLDRLRGVY 2054
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 ALLDCMYGLY 10
ALLD + G+Y
Sbjct: 2045 ALLDRLRGVY 2054
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 ALLDCMYGLY 10
ALLD + G+Y
Sbjct: 2045 ALLDRLRGVY 2054
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 ALLDCMYGLY 10
ALLD + G+Y
Sbjct: 2045 ALLDRLRGVY 2054
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 ALLDCMYGLY 10
ALLD + G+Y
Sbjct: 2045 ALLDRLRGVY 2054
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 ALLDCMYGLY 10
ALLD + G+Y
Sbjct: 2045 ALLDRLRGVY 2054
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 ALLDCMYGLY 10
ALLD + G+Y
Sbjct: 2045 ALLDRLRGVY 2054
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 ALLDCMYGLY 10
ALLD + G+Y
Sbjct: 2045 ALLDRLRGVY 2054
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 5 CMYGLY 10
C YG+Y
Sbjct: 233 CAYGVY 238
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 1 ALLDCM 6
ALLDC+
Sbjct: 526 ALLDCI 531
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 ALLDCM 6
ALLDC+
Sbjct: 526 ALLDCI 531
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 1 ALLDCM 6
ALLDC+
Sbjct: 522 ALLDCI 527
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 4 DCMYGL 9
DCMY +
Sbjct: 1554 DCMYSV 1559
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 4 DCMYGL 9
DCMY +
Sbjct: 1554 DCMYSV 1559
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 3 LDCMYG 8
+DC YG
Sbjct: 1075 VDCSYG 1080
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 3 LDCMYG 8
+DC YG
Sbjct: 1075 VDCSYG 1080
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 ALLDCMYGLY 10
A DC G+Y
Sbjct: 916 ARCDCQTGVY 925
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 CMYGLY 10
C++G+Y
Sbjct: 20 CIFGVY 25
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 5 CMYGLY 10
C++G+Y
Sbjct: 250 CVFGVY 255
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 5 CMYGLY 10
C++G+Y
Sbjct: 249 CVFGVY 254
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 5 CMYGLY 10
C++G+Y
Sbjct: 252 CVFGVY 257
44|SequenceR|225|216|RYPKDALLDC
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 YPKDALL 8
+P+DALL
Sbjct: 490 FPRDALL 496
>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YPKDALL 8
+P+DALL
Sbjct: 490 FPRDALL 496
>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 YPKDALL 8
+P+DALL
Sbjct: 489 FPRDALL 495
>sp|GL_HHV7J|ENVELOPE glycoprotein L|Human herpesvirus 7 (strain JI)
Query: 5 DALLDC 10
DALL+C
Sbjct: 202 DALLNC 207
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 YPKDALL 8
Y KDALL
Sbjct: 28 YQKDALL 34
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 3 PKDALLD 9
PK+AL+D
Sbjct: 312 PKEALID 318
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 RYPKDALLDC 10
RY +D L C
Sbjct: 2760 RYEEDVNLSC 2769
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 RYPKDALLDC 10
R P + +L+C
Sbjct: 144 RIPPEGVLNC 153
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 RYPKDALLDC 10
R P + +L+C
Sbjct: 144 RIPPEGVLNC 153
45|SequenceR|230|221|PKFHPRYPKD
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 PKFHPRYP 8
PKF P YP
Sbjct: 543 PKFPPTYP 550
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 PKFHPRYP 8
PKF P YP
Sbjct: 549 PKFPPTYP 556
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 PKFHPRYP 8
PKF P YP
Sbjct: 549 PKFPPSYP 556
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 KFHPRYPKD 10
K+HP PK+
Sbjct: 819 KYHPSTPKN 827
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 KFHPRYP 8
K HP+YP
Sbjct: 619 KLHPKYP 625
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 KFHPRYPK 9
++HP PK
Sbjct: 820 RYHPSTPK 827
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 3 FHPRYP 8
FHP YP
Sbjct: 606 FHPMYP 611
>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain GD1)
Query: 1 PKFHPRYPKD 10
P HP+YP D
Sbjct: 122 PINHPQYPGD 131
>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 PKFHPRYPKD 10
P HP+YP D
Sbjct: 122 PINHPQYPGD 131
>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 PKFHPRYPKD 10
P HP+YP D
Sbjct: 122 PINHPQYPGD 131
>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2
Query: 3 FHPRYPKD 10
F+P YP D
Sbjct: 11 FNPVYPYD 18
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 4 HPRYP 8
+PRYP
Sbjct: 258 YPRYP 262
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 4 HPRYP 8
+PRYP
Sbjct: 281 YPRYP 285
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KFHPRY 7
K HPRY
Sbjct: 354 KNHPRY 359
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 3 FHPRYPKD 10
F+P YP D
Sbjct: 10 FNPVYPYD 17
>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12
Query: 3 FHPRYPKD 10
F+P YP D
Sbjct: 18 FNPVYPFD 25
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 PKFHPRYP 8
P FHP P
Sbjct: 349 PGFHPTPP 356
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 3 FHPRYPKD 10
F+P YP D
Sbjct: 11 FNPVYPYD 18
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 3 FHPRYPKD 10
F+P YP D
Sbjct: 10 FNPVYPYD 17
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 4 HPRYPKD 10
HP +P+D
Sbjct: 2078 HPTFPED 2084
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 KFHPRYP 8
+FH +YP
Sbjct: 399 EFHNQYP 405
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 HPRY 7
HPRY
Sbjct: 357 HPRY 360
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 HPRY 7
HPRY
Sbjct: 352 HPRY 355
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 HPRY 7
HPRY
Sbjct: 352 HPRY 355
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 HPRY 7
HPRY
Sbjct: 349 HPRY 352
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 HPRY 7
HPRY
Sbjct: 358 HPRY 361
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 HPRY 7
HPRY
Sbjct: 358 HPRY 361
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 PKFHPRYPKD 10
P F+ R P+D
Sbjct: 862 PSFNVRGPRD 871
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 3 FHPRYPKD 10
F+P YP D
Sbjct: 18 FNPVYPFD 25
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 PKFHPRYP 8
P FH R P
Sbjct: 763 PTFHARAP 770
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 HPRY 7
HPRY
Sbjct: 358 HPRY 361
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 HPRY 7
HPRY
Sbjct: 350 HPRY 353
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 HPRY 7
HPRY
Sbjct: 349 HPRY 352
>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4
Query: 3 FHPRYPKD 10
F P YP D
Sbjct: 12 FDPVYPYD 19
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 PKFHPRYPKD 10
P FH + P+D
Sbjct: 394 PDFHLQGPED 403
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 PKFHPRYPKD 10
P FH + P+D
Sbjct: 393 PDFHLQGPED 402
>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus
Query: 3 FHPRY 7
FHPR+
Sbjct: 685 FHPRH 689
>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate
Query: 3 FHPRY 7
FHPR+
Sbjct: 685 FHPRH 689
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 3 FHPRY 7
FHPR+
Sbjct: 686 FHPRH 690
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 FHPRY 7
FHPR+
Sbjct: 685 FHPRH 689
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 3 FHPRY 7
FHPR+
Sbjct: 685 FHPRH 689
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 3 FHPRY 7
FHPR+
Sbjct: 685 FHPRH 689
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 3 FHPRY 7
FHPR+
Sbjct: 685 FHPRH 689
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 3 FHPRY 7
FHPR+
Sbjct: 685 FHPRH 689
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 FHPRY-PK 9
FHP Y PK
Sbjct: 39 FHPTYLPK 46
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 PKFHPRYPKD 10
P PRY KD
Sbjct: 80 PARRPRYSKD 89
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 1 PKFHPRYPKD 10
P PRY KD
Sbjct: 80 PARRPRYSKD 89
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 KFHPRYP 8
KF RYP
Sbjct: 1099 KFEQRYP 1105
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 FHPRY-PK 9
FHP Y PK
Sbjct: 39 FHPTYLPK 46
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 3 FHPRY-PK 9
FHP Y PK
Sbjct: 39 FHPTYIPK 46
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 PKFHP 5
P FHP
Sbjct: 349 PNFHP 353
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 PKFHP 5
P FHP
Sbjct: 349 PNFHP 353
>sp|E310_ADE12|EARLY E3B 10.4 kDa protein|Human adenovirus A serotype 12
Query: 2 KFHPRY 7
+ HPRY
Sbjct: 73 RHHPRY 78
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 1 PKFHPR 6
P FHP+
Sbjct: 417 PLFHPK 422
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 PKFHP 5
P FHP
Sbjct: 349 PNFHP 353
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 1 PKFHPR 6
P FHP+
Sbjct: 417 PLFHPK 422
>sp|US06_HCMVT|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 1 PKFHPRYPKD 10
PK H P D
Sbjct: 83 PKTHKSRPND 92
>sp|US06_HCMVM|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 1 PKFHPRYPKD 10
PK H P D
Sbjct: 82 PKTHKSRPND 91
>sp|US06_HCMVA|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 PKFHPRYPKD 10
PK H P D
Sbjct: 83 PKTHKSRPND 92
46|SequenceR|235|226|SKITLPKFHP
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 5 LPKFHP 10
LP FHP
Sbjct: 348 LPNFHP 353
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 5 LPKFHP 10
LP FHP
Sbjct: 348 LPNFHP 353
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 5 LPKFHP 10
LP FHP
Sbjct: 348 LPNFHP 353
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 SKITLPKFHP 10
+++T+P F+P
Sbjct: 1860 AELTIPNFYP 1869
>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)
Query: 1 SKITLPKFHP 10
+++T+PK HP
Sbjct: 323 TRVTVPKDHP 332
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 SKITLPKFHP 10
++IT P HP
Sbjct: 180 TEITAPSIHP 189
>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 2 KITLPKFH 9
KIT+ KF+
Sbjct: 231 KITMSKFY 238
>sp|PG021_MONPV|HOST range factor p28|Monkeypox virus (MPXV)
Query: 2 KITLPKFH 9
KIT+ KF+
Sbjct: 231 KITMSKFY 238
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 2 KITLPKFHP 10
K+T K+HP
Sbjct: 172 KLTYMKYHP 180
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 5 LPKFHP 10
LPKF P
Sbjct: 1404 LPKFRP 1409
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 LPKFH 9
+PKFH
Sbjct: 995 IPKFH 999
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 LPKFH 9
+PKFH
Sbjct: 996 IPKFH 1000
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 LPKFH 9
+PKFH
Sbjct: 997 IPKFH 1001
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 LPKFH 9
+PKFH
Sbjct: 994 IPKFH 998
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 LPKFH 9
+PKFH
Sbjct: 995 IPKFH 999
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 SKITLPKFHP 10
+++T P HP
Sbjct: 181 TELTAPSIHP 190
>sp|B3_HHV6Z|PROTEIN B3|Human herpesvirus 6B (strain Z29)
Query: 3 ITLPKFHP 10
++LP F+P
Sbjct: 18 VSLPAFNP 25
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 LPKFH 9
+PKFH
Sbjct: 997 IPKFH 1001
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 LPKFH 9
+PKFH
Sbjct: 996 IPKFH 1000
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 LPKFH 9
+PKFH
Sbjct: 996 IPKFH 1000
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 SKITLPKFHP 10
+++T P HP
Sbjct: 181 TELTAPSIHP 190
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 SKITLPKFHP 10
+++T P HP
Sbjct: 181 TELTAPSIHP 190
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 1 SKITLPKFHP 10
+++T P HP
Sbjct: 181 TELTAPSIHP 190
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 LPKFH 9
+PKFH
Sbjct: 995 VPKFH 999
47|SequenceR|240|231|PSVTISKITL
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PSVTISKIT 9
PSV +S+IT
Sbjct: 268 PSVMVSRIT 276
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 PSVTISKIT 9
PSVT KIT
Sbjct: 1934 PSVTSYKIT 1942
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 PSVTISKIT 9
P V +SK+T
Sbjct: 831 PDVKLSKLT 839
48|SequenceR|245|236|NFFPIPSVTI
>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 3 FPIPSV 8
FPIPSV
Sbjct: 161 FPIPSV 166
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 1 NFFPIPSVTI 10
N++PIP I
Sbjct: 483 NYYPIPEAEI 492
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 1 NFFPIPSVTI 10
N++PIP I
Sbjct: 483 NYYPIPEAEI 492
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NFFPIPSVTI 10
N++PIP I
Sbjct: 483 NYYPIPEAEI 492
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 NFFPIPSVTI 10
N++PIP I
Sbjct: 483 NYYPIPEAEI 492
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 NFFPIPSVTI 10
N++PIP I
Sbjct: 483 NYYPIPEAEI 492
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 FPIPSVTI 10
FP+P V I
Sbjct: 735 FPLPEVPI 742
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 NFFPIPS 7
N+FP PS
Sbjct: 290 NYFPTPS 296
>sp|VIF_HV1YF|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PIPSVT 9
P+PSVT
Sbjct: 162 PLPSVT 167
>sp|VIF_HV1YB|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PIPSVT 9
P+PSVT
Sbjct: 162 PLPSVT 167
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PIPSVT 9
P+PSVT
Sbjct: 162 PLPSVT 167
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PIPSVT 9
P+PSVT
Sbjct: 162 PLPSVT 167
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PIPSVT 9
P+PSVT
Sbjct: 162 PLPSVT 167
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PIPSVT 9
P+PSVT
Sbjct: 162 PLPSVT 167
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PIPSVT 9
P+PSVT
Sbjct: 162 PLPSVT 167
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PIPSVT 9
P+PSVT
Sbjct: 162 PLPSVT 167
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PIPSVT 9
P+PSVT
Sbjct: 162 PLPSVT 167
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FFPIPSV 8
F PIP+V
Sbjct: 548 FLPIPAV 554
>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PIPSVT 9
P PSVT
Sbjct: 162 PFPSVT 167
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 3 FPIPSVTI 10
FPIP+V +
Sbjct: 123 FPIPTVQV 130
>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 FFPIPS 7
FP+PS
Sbjct: 255 LFPVPS 260
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 NFFPIPSVTI 10
NF P P + I
Sbjct: 350 NFHPTPCIHI 359
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 NFFPIPSVTI 10
NF P P + I
Sbjct: 350 NFHPTPCIHI 359
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 4 PIPSVT 9
P+PS+T
Sbjct: 596 PLPSIT 601
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 NFFPIPSV 8
N PIPS+
Sbjct: 58 NSLPIPSM 65
>sp|IR01_HCMVA|UNCHARACTERIZED protein HKLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 FFPIPS 7
FP+PS
Sbjct: 256 LFPVPS 261
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 NFFPIPSV 8
N PIPS+
Sbjct: 58 NSLPIPSM 65
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 NFFPIPSV 8
N PIPS+
Sbjct: 58 NSLPIPSM 65
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 NFFPIPSV 8
N PIPS+
Sbjct: 58 NSLPIPSM 65
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 NFFPIPSVT 9
+F PIP+++
Sbjct: 683 SFVPIPALS 691
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 NFFPIPSV 8
N PIPS+
Sbjct: 58 NSLPIPSM 65
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 2 FFPIP 6
+FPIP
Sbjct: 49 YFPIP 53
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 NFFPIPSVTI 10
NF P P + I
Sbjct: 350 NFHPTPCIHI 359
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 3 FPIPSVT 9
PIPS+T
Sbjct: 433 LPIPSIT 439
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 2 FFPIP 6
+FPIP
Sbjct: 48 YFPIP 52
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 2 FFPIPSVT 9
+FPIP +
Sbjct: 49 YFPIPKTS 56
>sp|VPU_HV1B8|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 4 PIPSVT 9
PIP VT
Sbjct: 3 PIPIVT 8
49|SequenceR|250|241|GNRQKNFFPI
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 RQKNFFPI 10
+Q+NF PI
Sbjct: 1481 QQQNFIPI 1488
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 3 RQKNFFP 9
+Q+N FP
Sbjct: 93 KQRNMFP 99
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 2 NRQKNFFP 9
++Q+N FP
Sbjct: 92 HKQRNMFP 99
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 RQKNFFPI 10
+Q+NF PI
Sbjct: 1481 QQQNFIPI 1488
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 RQKNFFPI 10
+Q+NF PI
Sbjct: 1481 QQQNFIPI 1488
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 4 QKNFFPI 10
QK+ FPI
Sbjct: 72 QKSLFPI 78
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 4 QKNFFPI 10
QK+ FPI
Sbjct: 72 QKSLFPI 78
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 4 QKNFFPI 10
QK+ FPI
Sbjct: 72 QKSLFPI 78
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 4 QKNFFPI 10
QK+ FPI
Sbjct: 72 QKSLFPI 78
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 4 QKNFFPI 10
QK+ FPI
Sbjct: 72 QKSLFPI 78
>sp|UL03_HCMVA|UNCHARACTERIZED protein UL3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GNRQKNFF 8
NR NFF
Sbjct: 5 ANRDDNFF 12
>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GNRQKNF 7
GNR +N+
Sbjct: 106 GNRPRNY 112
>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 GNRQKNF 7
GNR +N+
Sbjct: 106 GNRPRNY 112
>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain
Query: 4 QKNFFPI 10
+K+F+PI
Sbjct: 543 KKDFYPI 549
50|SequenceR|255|246|CYPRCGNRQK
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 2 YPRCGNRQK 10
+P C ++QK
Sbjct: 739 FPTCADKQK 747
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CYPRCGNRQK 10
C+P GN +K
Sbjct: 176 CHPNLGNHRK 185
>sp|UL20_HCMVA|UNCHARACTERIZED protein UL20|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CYPRCG 6
CY RCG
Sbjct: 247 CYYRCG 252
>sp|UL20_HCMVM|MEMBRANE protein UL20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CYPRCG 6
CY RCG
Sbjct: 245 CYYRCG 250
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 YPRCGN 7
YP+C N
Sbjct: 1900 YPKCKN 1905
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 YPRCGN 7
YP+C N
Sbjct: 1896 YPKCKN 1901
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 YPRCGN 7
YP+C N
Sbjct: 1898 YPKCKN 1903
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 YPRCGN 7
YP+C N
Sbjct: 1898 YPKCKN 1903
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 YPRCGN 7
YP+C N
Sbjct: 1900 YPKCKN 1905
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 YPRCGN 7
YP+C N
Sbjct: 1899 YPKCKN 1904
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 YPRCGN 7
YP+C N
Sbjct: 1899 YPKCKN 1904
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 YPRCGN 7
YP+C N
Sbjct: 1899 YPKCKN 1904
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 YPRCGN 7
YP+C N
Sbjct: 1899 YPKCKN 1904
>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16
Query: 2 YPRCGNRQ 9
Y R GN+Q
Sbjct: 303 YSRIGNKQ 310
>sp|VL2_HPV31|MINOR capsid protein L2|Human papillomavirus 31
Query: 2 YPRCGNRQ 9
Y R GN+Q
Sbjct: 296 YSRLGNKQ 303
>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PRCGNRQK 10
PR NRQK
Sbjct: 234 PRLMNRQK 241
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 YPRCGN 7
YP C N
Sbjct: 88 YPECNN 93
>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PRCGNRQK 10
PR NRQK
Sbjct: 234 PRLMNRQK 241
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 CYPRCGN 7
CY +C N
Sbjct: 687 CYAKCCN 693
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 CYPRCGN 7
CY +C N
Sbjct: 687 CYAKCCN 693
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 CYPRCGN 7
CY +C N
Sbjct: 687 CYAKCCN 693
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 CYPRCGN 7
CY +C N
Sbjct: 687 CYAKCCN 693
>sp|K81_HHV8P|PROTEIN K8.1|Human herpesvirus 8 type P
Query: 1 CYPRCGNRQ 9
C PRC ++
Sbjct: 216 CVPRCRRKK 224
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 2 YPRC 5
YPRC
Sbjct: 288 YPRC 291
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 YPRCGN 7
YP C N
Sbjct: 589 YPMCSN 594
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 CYPRCGNRQK 10
CY CG +K
Sbjct: 480 CYWGCGRVEK 489
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 PRCGNR 8
P CG R
Sbjct: 1082 PNCGGR 1087
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 CYPRCGNRQ 9
CY RC N +
Sbjct: 920 CYFRCPNSE 928
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 CYPRCG 6
C P CG
Sbjct: 212 CTPACG 217
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CYPRCGN 7
CY CG+
Sbjct: 2032 CYHVCGS 2038
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CYPRCGN 7
CY CG+
Sbjct: 2031 CYHVCGS 2037
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CYPRCGN 7
CY CG+
Sbjct: 2031 CYHVCGS 2037
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CYPRCGN 7
CY CG+
Sbjct: 2031 CYHVCGS 2037
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CYPRCGN 7
CY CG+
Sbjct: 1865 CYHVCGS 1871
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CYPRCGN 7
CY CG+
Sbjct: 2031 CYHVCGS 2037
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 CYPRC 5
C PRC
Sbjct: 497 CAPRC 501
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 CYPRC 5
C PRC
Sbjct: 497 CAPRC 501
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 CYPRC 5
C PRC
Sbjct: 497 CAPRC 501
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 CYPRC 5
C PRC
Sbjct: 497 CAPRC 501
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 CYPRC 5
C PRC
Sbjct: 497 CAPRC 501
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 CYPRC 5
C PRC
Sbjct: 497 CAPRC 501
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 CYPRC 5
C PRC
Sbjct: 497 CAPRC 501
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 CYPRC 5
C PRC
Sbjct: 497 CAPRC 501
51|SequenceR|260|251|GILVDCYPRC
>sp|US11_HCMVA|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 4 VDCYPRC 10
V+C PRC
Sbjct: 140 VECEPRC 146
>sp|US11_HCMVT|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 4 VDCYPRC 10
V+C PRC
Sbjct: 140 VECEPRC 146
>sp|US11_HCMVM|MEMBRANE glycoprotein US11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 VDCYPRC 10
V+C PRC
Sbjct: 140 VECEPRC 146
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 ILVDCYPR 9
+ VDC PR
Sbjct: 476 VTVDCEPR 483
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 ILVDCYPR 9
+ VDC PR
Sbjct: 472 VTVDCEPR 479
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 ILVDCYPR 9
+ VDC PR
Sbjct: 476 VTVDCEPR 483
>sp|MC132_MCV1|PROTEIN MC132|Molluscum contagiosum virus subtype 1
Query: 1 GILVDCYPRC 10
G LVDCY C
Sbjct: 138 GNLVDCYWSC 147
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ILVDCYPR 9
+L CYPR
Sbjct: 1536 VLDRCYPR 1543
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 VDCYPR 9
VDC PR
Sbjct: 473 VDCEPR 478
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 ILVDCYPRC 10
+++D YP C
Sbjct: 482 VVIDMYPVC 490
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 ILVDCYPRC 10
+++D YP C
Sbjct: 482 VVIDMYPVC 490
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 3 LVDCY 7
LVDCY
Sbjct: 404 LVDCY 408
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 3 LVDCY 7
LVDCY
Sbjct: 513 LVDCY 517
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 3 LVDCY 7
LVDCY
Sbjct: 529 LVDCY 533
>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1
Query: 3 LVDCY 7
LVDCY
Sbjct: 406 LVDCY 410
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 1 GILVDCYPRC 10
G+L D P+C
Sbjct: 513 GLLDDATPQC 522
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 1 GILVDCYPRC 10
G+L D P+C
Sbjct: 513 GLLDDATPQC 522
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 GILVDCYPRC 10
G++ D PRC
Sbjct: 426 GVMPDDSPRC 435
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 1 GILVDCYPRC 10
G++ D PRC
Sbjct: 426 GVMPDDSPRC 435
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 3 LVDCYPRC 10
L++C+ RC
Sbjct: 529 LLECHCRC 536
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 ILVDCYPR 9
+ +DC PR
Sbjct: 181 VTMDCSPR 188
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 3 LVDCYPRC 10
L++C+ RC
Sbjct: 531 LLECHCRC 538
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 3 LVDCYPRC 10
L++C+ RC
Sbjct: 546 LMECHCRC 553
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 ILVDCYPR 9
+ +DC PR
Sbjct: 480 VTLDCEPR 487
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 ILVDCYPR 9
+ +DC PR
Sbjct: 480 VTLDCEPR 487
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 ILVDCYPR 9
+ +DC PR
Sbjct: 480 VTLDCEPR 487
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 ILVDCYPR 9
+ +DC PR
Sbjct: 480 VTLDCEPR 487
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 ILVDCYPR 9
+ +DC PR
Sbjct: 472 VTLDCEPR 479
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 ILVDCYPR 9
+ +DC PR
Sbjct: 408 VTLDCEPR 415
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 ILVDCYPR 9
+ +DC PR
Sbjct: 480 VTLDCEPR 487
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 ILVDCYPR 9
+ +DC PR
Sbjct: 480 VTLDCEPR 487
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 ILVDCYPR 9
+ +DC PR
Sbjct: 480 VTLDCEPR 487
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 ILVDCYPR 9
+ +DC PR
Sbjct: 480 VTLDCEPR 487
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 3 LVDCYPRC 10
L++C+ RC
Sbjct: 562 LLECHCRC 569
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 3 LVDCYPRC 10
L++C+ RC
Sbjct: 562 LLECHCRC 569
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GILVDCY 7
G+L+ CY
Sbjct: 1379 GLLIACY 1385
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GILVDCY 7
G+L+ CY
Sbjct: 1379 GLLIACY 1385
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GILVDCY 7
G+L+ CY
Sbjct: 1379 GLLIACY 1385
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GILVDCY 7
G+L+ CY
Sbjct: 1379 GLLIACY 1385
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GILVDCY 7
G+L+ CY
Sbjct: 1379 GLLIACY 1385
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GILVDCYPR 9
+ +DC PR
Sbjct: 460 ALTLDCSPR 468
Query: 1 GILVDCY 7
G+L+ CY
Sbjct: 1381 GMLIACY 1387
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GILVDCYPR 9
+ +DC PR
Sbjct: 460 ALTLDCSPR 468
Query: 1 GILVDCY 7
G+L+ CY
Sbjct: 1380 GMLIACY 1386
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GILVDCYPR 9
+ +DC PR
Sbjct: 460 ALTLDCSPR 468
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GILVDCYPR 9
+ +DC PR
Sbjct: 460 ALTLDCSPR 468
Query: 1 GILVDCY 7
G+L+ CY
Sbjct: 1381 GMLIACY 1387
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GILVDCYPR 9
+ +DC PR
Sbjct: 460 ALTLDCSPR 468
>sp|PB1F2_I02A4|PROTEIN PB1-F2|Influenza A virus (strain A/Silky
Query: 3 LVDCYPR 9
L+D YPR
Sbjct: 38 LMDHYPR 44
>sp|PB1F2_I02A3|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong
Query: 3 LVDCYPR 9
L+D YPR
Sbjct: 38 LMDHYPR 44
>sp|PB1F2_I02A2|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong
Query: 3 LVDCYPR 9
L+D YPR
Sbjct: 38 LMDHYPR 44
>sp|PB1F2_I02A1|PROTEIN PB1-F2|Influenza A virus (strain A/Guinea
Query: 3 LVDCYPR 9
L+D YPR
Sbjct: 38 LMDHYPR 44
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 LVDCYPR 9
++DCY R
Sbjct: 26 VLDCYDR 32
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 5 DCYPRC 10
D YP C
Sbjct: 13 DIYPSC 18
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 ILVDCYPR 9
+ +DC PR
Sbjct: 460 LTLDCEPR 467
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 ILVDCYPR 9
+ +DC PR
Sbjct: 460 LTLDCEPR 467
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 ILVDCYPR 9
+ +DC PR
Sbjct: 460 LTLDCEPR 467
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 ILVDCYPR 9
+ +DC PR
Sbjct: 460 LTLDCEPR 467
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 3 LVDCYPR 9
+VDCY R
Sbjct: 543 VVDCYWR 549
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 3 LVDCYPR 9
+VDCY R
Sbjct: 543 VVDCYWR 549
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 LVDCYP 8
LVDC P
Sbjct: 545 LVDCAP 550
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 ILVDCYPR 9
+ V+C PR
Sbjct: 478 VTVECEPR 485
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 LVDCYP 8
LVDC P
Sbjct: 545 LVDCAP 550
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 5 DCYPRC 10
D YP C
Sbjct: 13 DIYPAC 18
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 6 CYPRC 10
CYP C
Sbjct: 291 CYPCC 295
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 6 CYPRC 10
CYP C
Sbjct: 291 CYPCC 295
>sp|UL20_HCMVA|UNCHARACTERIZED protein UL20|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 CYPRC 10
CY RC
Sbjct: 247 CYYRC 251
52|SequenceR|265|256|YIKTEGILVD
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 1 YIKTEGI 7
YI TEGI
Sbjct: 228 YISTEGI 234
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 4 TEGILVD 10
+EGI+VD
Sbjct: 248 SEGIIVD 254
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 3 KTEGILV 9
KTEG+L
Sbjct: 457 KTEGVLA 463
53|SequenceR|270|261|DTCTSYIKTE
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 4 TSYIKTE 10
T YIKT+
Sbjct: 436 TPYIKTQ 442
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 4 TSYIKTE 10
T YIKT+
Sbjct: 436 TPYIKTQ 442
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 4 TSYIKTE 10
T YIKT+
Sbjct: 436 TPYIKTQ 442
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 4 TSYIKTE 10
T YIKT+
Sbjct: 436 TPYIKTQ 442
54|SequenceR|275|266|KMREFDTCTS
***** No hits found ******
55|SequenceR|280|271|QVRYEKMREF
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 RYEKMREF 10
RY+KMR F
Sbjct: 880 RYKKMRVF 887
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 2 VRYEKMREF 10
++Y KM+EF
Sbjct: 343 IQYPKMKEF 351
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VRYEKMREF 10
++Y KM+EF
Sbjct: 343 LQYPKMKEF 351
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 2 VRYEKMREF 10
++Y KM+EF
Sbjct: 343 LQYPKMKEF 351
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 3 RYEKMRE 9
+Y KMRE
Sbjct: 377 KYAKMRE 383
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 3 RYEKMRE 9
+Y KMRE
Sbjct: 377 KYAKMRE 383
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 3 RYEKMRE 9
+Y KMRE
Sbjct: 377 KYAKMRE 383
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 QVRYEKMREF 10
Q+R E REF
Sbjct: 1089 QMRQEGWREF 1098
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 2 VRYEKMRE 9
+ YE++RE
Sbjct: 113 INYEELRE 120
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 2 VRYEKMRE 9
+ YE++RE
Sbjct: 113 INYEELRE 120
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 VRYEKMRE 9
+ YE++RE
Sbjct: 113 INYEELRE 120
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 VRYEKMRE 9
+ YE++RE
Sbjct: 113 INYEELRE 120
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 2 VRYEKMRE 9
+ YE++RE
Sbjct: 113 INYEELRE 120
>sp|MATRX_VSIVG|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 1 QVRYEK 6
Q+RYEK
Sbjct: 58 QLRYEK 63
>sp|MATRX_VSIVN|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 1 QVRYEK 6
Q+RYEK
Sbjct: 58 QLRYEK 63
>sp|MATRX_VSIVS|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 1 QVRYEK 6
Q+RYEK
Sbjct: 58 QLRYEK 63
>sp|MATRX_VSIVC|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 1 QVRYEK 6
Q+RYEK
Sbjct: 58 QLRYEK 63
>sp|MATRX_VSIVA|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 1 QVRYEK 6
Q+RYEK
Sbjct: 58 QLRYEK 63
>sp|NCAP_RVFV|NUCLEOPROTEIN valley fever virus (RVFV)
Query: 2 VRYEKMREF 10
+ +EK REF
Sbjct: 209 ISHEKRREF 217
>sp|NCAP_RVFVZ|NUCLEOPROTEIN valley fever virus (strain
Query: 2 VRYEKMREF 10
+ +EK REF
Sbjct: 209 ISHEKRREF 217
56|SequenceR|285|276|FIKGDQVRYE
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 IKGDQVR 8
I+GD+VR
Sbjct: 402 IRGDEVR 408
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 1 FIKGDQVRY 9
F+K D V+Y
Sbjct: 90 FLKSDAVQY 98
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 FIKGDQVRY 9
F+K D V+Y
Sbjct: 90 FLKSDAVQY 98
>sp|PG050_VARV|PROTEIN OPG050|Variola virus
Query: 1 FIKGDQVRY 9
IK DQ++Y
Sbjct: 15 LIKNDQIKY 23
>sp|PG050_VAR67|PROTEIN OPG050|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 FIKGDQVRY 9
IK DQ++Y
Sbjct: 15 LIKNDQIKY 23
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 2 IKGDQV 7
+KGDQ+
Sbjct: 13 VKGDQI 18
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 1 FIKGDQVR 8
F+K D+VR
Sbjct: 708 FLKEDRVR 715
57|SequenceR|290|281|INLPIFIKGD
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 3 LPIFIKG 9
LP FIKG
Sbjct: 335 LPSFIKG 341
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 INLPIFIKGD 10
+N P+FI D
Sbjct: 444 LNKPVFITMD 453
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 INLPIFIKGD 10
+N P+FI D
Sbjct: 435 LNKPVFITMD 444
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 1 INLPIFIKGD 10
+N P+FI D
Sbjct: 435 LNKPVFITMD 444
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 INLPIFI 7
+NLPI I
Sbjct: 795 VNLPILI 801
>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)
Query: 2 NLPIFI 7
N+PIFI
Sbjct: 351 NVPIFI 356
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 LPIFIKGD 10
LP+ I GD
Sbjct: 6132 LPVAISGD 6139
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 2 NLPIFI 7
N+PIFI
Sbjct: 351 NVPIFI 356
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 NLPIFI 7
N+PIFI
Sbjct: 351 NVPIFI 356
>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)
Query: 3 LPIFIKGD 10
+PI+ +GD
Sbjct: 132 IPIYKRGD 139
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 NLPIFIK 8
N P+F+K
Sbjct: 1594 NTPVFLK 1600
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 NLPIFIK 8
N P+F+K
Sbjct: 1594 NTPVFLK 1600
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 2 NLPIFI 7
N+P+FI
Sbjct: 23 NVPVFI 28
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 1 INLPIF 6
IN+PIF
Sbjct: 368 INIPIF 373
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 1 INLPIF 6
IN+PIF
Sbjct: 368 INIPIF 373
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 1 INLPIF 6
IN+PIF
Sbjct: 368 INIPIF 373
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 1 INLPIF 6
IN+PIF
Sbjct: 368 INIPIF 373
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 1 INLPIF 6
IN+PIF
Sbjct: 368 INIPIF 373
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 PIFIKG 9
PI++KG
Sbjct: 776 PIYLKG 781
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 PIFIKG 9
PI++KG
Sbjct: 776 PIYLKG 781
>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)
Query: 3 LPIFIKGD 10
+PI+ +GD
Sbjct: 132 IPIYKRGD 139
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 1 INLPIFI 7
IN+P FI
Sbjct: 277 INVPTFI 283
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 1 INLPIFI 7
IN+P FI
Sbjct: 277 INVPTFI 283
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 1 INLPIFI 7
IN+P FI
Sbjct: 277 INVPTFI 283
58|SequenceR|295|286|DGQVTINLPI
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 QVTINLPI 10
QVTI LP+
Sbjct: 105 QVTIRLPL 112
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 2 GQVTINLP 9
GQV++ LP
Sbjct: 119 GQVSVQLP 126
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 2 GQVTINLP 9
GQV++ LP
Sbjct: 119 GQVSVQLP 126
>sp|VP6_ROTB2|INTERMEDIATE capsid protein VP6|Rotavirus X (isolate
Query: 1 DGQVTIN 7
DGQ TIN
Sbjct: 29 DGQTTIN 35
>sp|VP6_ROTJ1|INTERMEDIATE capsid protein VP6|Rotavirus X (strain
Query: 1 DGQVTIN 7
DGQ TIN
Sbjct: 29 DGQTTIN 35
>sp|NS4A_CVH22|NON-STRUCTURAL protein 4a|Human coronavirus 229E (HCoV-229E)
Query: 1 DGQVTINL 8
DG VT NL
Sbjct: 37 DGTVTFNL 44
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 DGQVTINLP 9
D Q IN+P
Sbjct: 139 DAQSAINIP 147
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 GQVTINLPI 10
GQ+ IN P+
Sbjct: 887 GQLAINKPL 895
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 GQVTINLPI 10
GQ+ IN P+
Sbjct: 887 GQLAINKPL 895
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 2 GQVTINL 8
GQ+T+NL
Sbjct: 301 GQLTLNL 307
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 GQVTINLPI 10
GQV LPI
Sbjct: 1437 GQVDAELPI 1445
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 1 DGQVTINL 8
DG V +NL
Sbjct: 519 DGSVKVNL 526
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 DGQVTINL 8
DG V +NL
Sbjct: 503 DGSVKVNL 510
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 DGQVTINL 8
DG V +NL
Sbjct: 504 DGSVKVNL 511
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 DGQVTINL 8
DG V +NL
Sbjct: 504 DGSVKVNL 511
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 DGQVTINLPI 10
DG + NLPI
Sbjct: 246 DGTLLGNLPI 255
>sp|RP22_VACCC|DNA-DIRECTED RNA polymerase 22 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DGQVTINLP 9
DG+ T+ LP
Sbjct: 132 DGKKTLRLP 140
>sp|RP22_MONPV|DNA-DIRECTED RNA polymerase 22 kDa|Monkeypox virus (MPXV)
Query: 1 DGQVTINLP 9
DG+ T+ LP
Sbjct: 132 DGKKTLRLP 140
>sp|RP22_VAR67|DNA-DIRECTED RNA polymerase 22 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 DGQVTINLP 9
DG+ T+ LP
Sbjct: 132 DGKKTLRLP 140
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 TINLPI 10
T+NLPI
Sbjct: 585 TLNLPI 590
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GQVTINLP 9
G V+ NLP
Sbjct: 481 GTVSFNLP 488
>sp|VHR2_YLDV|PROBABLE host range protein 2|Yaba-like disease virus (YLDV)
Query: 4 VTINLP 9
VTIN+P
Sbjct: 114 VTINVP 119
>sp|VHR2_YMTV5|PROBABLE host range protein 2|Yaba monkey tumor virus (strain
Query: 4 VTINLP 9
VTIN+P
Sbjct: 114 VTINVP 119
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 4 VTINLPI 10
VTIN P+
Sbjct: 402 VTINAPL 408
59|SequenceR|300|291|MSVVVDGQVT
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 1 MSVVVDGQV 9
++VV+DG V
Sbjct: 605 IAVVIDGDV 613
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 MSVVVDGQ 8
+SVVV GQ
Sbjct: 872 LSVVVKGQ 879
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 SVVVDGQ 8
S+V+DG+
Sbjct: 1611 SIVIDGK 1617
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 SVVVDGQ 8
S+V+DG+
Sbjct: 1611 SIVIDGK 1617
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 2 SVVVDG 7
S+VVDG
Sbjct: 4 SIVVDG 9
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 SVVVDGQ 8
S+V+DG+
Sbjct: 1608 SIVIDGK 1614
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 SVVVDGQ 8
S+V+DG+
Sbjct: 1616 SIVIDGK 1622
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 MSVVVDGQV 9
MS+ +DG V
Sbjct: 146 MSIELDGDV 154
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 1 MSVVVDGQV 9
MS+ +DG V
Sbjct: 146 MSIELDGDV 154
60|SequenceR|305|296|SRLHYMSVVV
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 SRLHYMSVV 9
SR H++SVV
Sbjct: 1488 SRDHFISVV 1496
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 3 LHYMSVVV 10
+H++SVVV
Sbjct: 433 VHWLSVVV 440
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 SRLHYMSVVV 10
S+ HY VVV
Sbjct: 502 SQTHYRYVVV 511
61|SequenceR|310|301|RSGITSRLHY
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 SGITSRLHY 10
+GI S +HY
Sbjct: 1807 TGIVSSMHY 1815
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 SGITSRLHY 10
+GI S +HY
Sbjct: 1807 TGIVSSMHY 1815
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 SGITSRLHY 10
+GI S +HY
Sbjct: 1805 TGIVSSMHY 1813
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 SGITSRLHY 10
+GI S +HY
Sbjct: 1805 TGIVSSMHY 1813
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 SGITSRLHY 10
+GI S +HY
Sbjct: 1804 TGIVSSMHY 1812
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 SGITSRLHY 10
+GI S +HY
Sbjct: 1804 TGIVSSMHY 1812
>sp|PG162_VACCC|PROTEIN OPG162|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SGITSRLHY 10
SGI + LHY
Sbjct: 30 SGIGTFLHY 38
>sp|PG162_VAR67|PROTEIN OPG162|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 SGITSRLHY 10
SGI + LHY
Sbjct: 30 SGIGTFLHY 38
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 1 RSGITSRLH 9
R ITSR H
Sbjct: 289 RPAITSRRH 297
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 RSGITSRLH 9
R GITS H
Sbjct: 528 REGITSSDH 536
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 RSGITSRLH 9
R GITS H
Sbjct: 527 REGITSSDH 535
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 RSGITSRLH 9
R GITS H
Sbjct: 529 REGITSSDH 537
>sp|PG162_MONPV|PROTEIN OPG162|Monkeypox virus (MPXV)
Query: 2 SGITSRLHY 10
SGI + LHY
Sbjct: 30 SGIGTFLHY 38
62|SequenceR|315|306|VKAQLRSGIT
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 2 KAQLRSG 8
+AQ+RSG
Sbjct: 174 QAQMRSG 180
>sp|ICP22_HHV2|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (HHV-2) (Human
Query: 2 KAQLRSG 8
+AQ+RSG
Sbjct: 175 QAQMRSG 181
63|SequenceR|320|311|IQTNTVKAQL
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 NTVKAQL 10
NTVKA+L
Sbjct: 1538 NTVKAEL 1544
64|SequenceR|325|316|FQLQFIQTNT
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 QLQFIQTN 9
QLQF+ TN
Sbjct: 410 QLQFVNTN 417
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 QLQFIQTNT 10
Q +FIQTN+
Sbjct: 803 QEEFIQTNS 811
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 1 FQLQFIQT 8
FQ+ FIQT
Sbjct: 224 FQVNFIQT 231
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 QLQFIQT 8
++QF+QT
Sbjct: 1377 EIQFLQT 1383
65|SequenceR|330|321|IFGTHFQLQF
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 3 GTHFQLQ 9
G HFQ+Q
Sbjct: 167 GFHFQVQ 173
Query: 1 IFGTH 5
IFGTH
Sbjct: 881 IFGTH 885
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 3 GTHFQLQ 9
G HFQ+Q
Sbjct: 166 GFHFQVQ 172
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 3 GTHFQLQ 9
G HFQ+Q
Sbjct: 166 GFHFQVQ 172
Query: 1 IFGTH 5
IFGTH
Sbjct: 873 IFGTH 877
66|SequenceR|335|326|TTDLPIFGTH
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 LPIFG 8
LPIFG
Sbjct: 273 LPIFG 277
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 TDLPIFG 8
TDL +FG
Sbjct: 178 TDLELFG 184
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 TTDLPIFGT 9
T D+ IFG+
Sbjct: 230 TVDVTIFGS 238
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 TDLPIFG 8
TDL +FG
Sbjct: 178 TDLELFG 184
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 TDLPIFG 8
TDL +FG
Sbjct: 178 TDLELFG 184
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 TDLPIFG 8
TDL +FG
Sbjct: 178 TDLELFG 184
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 DLPIFGTH 10
D+PI+G +
Sbjct: 199 DVPIYGRY 206
67|SequenceR|340|331|TFKLVTTDLP
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 3 KLVTTDLP 10
KLVTTD P
Sbjct: 363 KLVTTDSP 370
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 KLVTTDLP 10
KLVTTD P
Sbjct: 363 KLVTTDSP 370
>sp|NEF_HV2UC|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 FKLVTTDLP 10
+KLV D+P
Sbjct: 157 WKLVPVDIP 165
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 1 TFKLVTTDLP 10
TF+L TD P
Sbjct: 170 TFQLNLTDSP 179
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 TFKLVTTDLP 10
TFK+++ ++P
Sbjct: 1865 TFKIMSGEMP 1874
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 2 FKLVTTDLP 10
+KLV +D P
Sbjct: 710 YKLVASDAP 718
>sp|NEF_HV2ST|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 FKLVTTDLP 10
+KLV D+P
Sbjct: 174 WKLVPVDVP 182
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 FKLVTTDLP 10
+KLV D+P
Sbjct: 175 WKLVPVDVP 183
>sp|NEF_HV2KR|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 FKLVTTDLP 10
+KLV D+P
Sbjct: 175 WKLVPVDVP 183
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 2 FKLVTTDLP 10
F+ V+ DLP
Sbjct: 452 FRCVSEDLP 460
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 1 TFKLVTTDL 9
TF+ +TT++
Sbjct: 275 TFRCITTNM 283
68|SequenceR|345|336|DLEPKTFKLV
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LEPKTFKL 9
L+P TFKL
Sbjct: 50 LDPPTFKL 57
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LEPKTFKL 9
L+P TFKL
Sbjct: 50 LDPPTFKL 57
>sp|NEF_HV2NZ|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 LEPKTFKL 9
L P TFKL
Sbjct: 108 LRPMTFKL 115
>sp|NEF_HV2EH|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 LEPKTFKL 9
L P TFKL
Sbjct: 90 LRPMTFKL 97
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 DLEPKTFKL 9
+LEP TF L
Sbjct: 675 NLEPGTFNL 683
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 1 DLEPKTFKL 9
+LEP TF L
Sbjct: 675 NLEPGTFNL 683
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 LEPKTFKL 9
L+P+TF L
Sbjct: 270 LQPRTFLL 277
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 3 EPKTFK 8
+PKTFK
Sbjct: 389 QPKTFK 394
>sp|NEF_HV2D2|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 LEPKTFKL 9
L P T+KL
Sbjct: 91 LRPMTYKL 98
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 EPKTFKL 9
EPKTF +
Sbjct: 8 EPKTFNI 14
69|SequenceR|350|341|PVDCADLEPK
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 3 DCADLE 8
DC+DLE
Sbjct: 22 DCSDLE 27
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 PVDCADL 7
P+DC++L
Sbjct: 2069 PIDCSEL 2075
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 4 CADLEPK 10
CA L+PK
Sbjct: 252 CAKLDPK 258
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 3 DCADLE 8
DC+DLE
Sbjct: 23 DCSDLE 28
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 4 CADLEPK 10
C DLEP+
Sbjct: 2659 CCDLEPE 2665
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 4 CADLEPK 10
C DLEP+
Sbjct: 2674 CCDLEPE 2680
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 2 VDCADLEP 9
VDC LEP
Sbjct: 35 VDCYVLEP 42
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 PVDCADLEP 9
P+D DL+P
Sbjct: 1152 PLDKVDLKP 1160
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PVDCADLEP 9
P+D DL+P
Sbjct: 1152 PLDKVDLKP 1160
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 PVDCADLEP 9
P+D DL+P
Sbjct: 1152 PLDKVDLKP 1160
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 PVDCADLEP 9
P+D DL+P
Sbjct: 1152 PLDKVDLKP 1160
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 PVDCADLEP 9
P+D DL+P
Sbjct: 1152 PLDKVDLKP 1160
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PVDCADLEP 9
P+D DL+P
Sbjct: 1144 PLDKVDLKP 1152
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 PVDCADLEP 9
P+D DL+P
Sbjct: 1152 PLDKVDLKP 1160
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 PVDCADLEP 9
P+D DL+P
Sbjct: 1152 PLDKVDLKP 1160
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PVDCADLEPK 10
PVD + L PK
Sbjct: 315 PVDLSYLAPK 324
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 PVDCADLEP 9
P+D DL+P
Sbjct: 1152 PLDKVDLKP 1160
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 1 PVDCADLEPK 10
PVD + L PK
Sbjct: 315 PVDLSYLAPK 324
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PVDCADLEPK 10
PVD + L PK
Sbjct: 315 PVDLSYLAPK 324
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PVDCADLEPK 10
PVD + L PK
Sbjct: 315 PVDLSYLAPK 324
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PVDCADLEPK 10
PVD + L PK
Sbjct: 315 PVDLSYLAPK 324
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PVDCADLEPK 10
PVD + L PK
Sbjct: 315 PVDLSYLAPK 324
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 3 DCADLE 8
DC+D+E
Sbjct: 21 DCSDIE 26
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PVDCADLEPK 10
PVD + L PK
Sbjct: 315 PVDLSYLAPK 324
>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)
Query: 1 PVDCADLEP 9
PVD LEP
Sbjct: 78 PVDPTGLEP 86
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 PVDCA 5
P+DCA
Sbjct: 723 PIDCA 727
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 PVDCA 5
P+DCA
Sbjct: 723 PIDCA 727
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 3 DCADLE 8
DC+D+E
Sbjct: 22 DCSDIE 27
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 3 DCADLE 8
DC+D+E
Sbjct: 24 DCSDVE 29
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 PVDCADLEP 9
P+D ++EP
Sbjct: 180 PIDLRNMEP 188
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 1 PVDCAD 6
P+DCA+
Sbjct: 51 PLDCAN 56
>sp|PAX_I04A1|PROTEIN PA-X|Influenza A virus (strain A/Vietnam/1203/2004
Query: 4 CADLEPK 10
CADL+ K
Sbjct: 211 CADLQTK 217
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 VDCADLEPK 10
+ C D PK
Sbjct: 133 LQCEDFSPK 141
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 3 DCADLE 8
DC+D+E
Sbjct: 24 DCSDVE 29
>sp|ORF49_HHV8P|PROTEIN ORF49|Human herpesvirus 8 type P
Query: 3 DCADLE 8
DC+D+E
Sbjct: 278 DCSDVE 283
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 3 DCADLE 8
DC+D+E
Sbjct: 22 DCSDVE 27
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 CADLEPK 10
C DL+P+
Sbjct: 2662 CCDLDPQ 2668
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 CADLEPK 10
C DL+P+
Sbjct: 2662 CCDLDPQ 2668
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 CADLEPK 10
C DL+P+
Sbjct: 2662 CCDLDPQ 2668
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 1 PVDCADLEP 9
PVD LEP
Sbjct: 78 PVDPTGLEP 86
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 DCADLE 8
DC++LE
Sbjct: 606 DCSELE 611
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 PVDCADLEPK 10
P DC D + K
Sbjct: 498 PKDCTDKDHK 507
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 VDCADLEPK 10
V C +++PK
Sbjct: 1887 VVCTEIDPK 1895
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 3 DCADLE 8
+C+DLE
Sbjct: 22 ECSDLE 27
>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 DCADL 7
DCAD+
Sbjct: 103 DCADI 107
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 VDCADLEPK 10
V C +++PK
Sbjct: 1887 VVCTEIDPK 1895
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 1 PVDCA 5
PVDCA
Sbjct: 707 PVDCA 711
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 1 PVDCA 5
PVDCA
Sbjct: 705 PVDCA 709
70|SequenceR|355|346|QPYKEPVDCA
>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain
Query: 2 PYKEPVDC 9
P K+P++C
Sbjct: 56 PLKKPIEC 63
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 4 KEPVDC 9
+EPVDC
Sbjct: 1765 EEPVDC 1770
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 4 KEPVDC 9
+EPVDC
Sbjct: 1756 EEPVDC 1761
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 QPYKEPVDCA 10
+PY++ V+C+
Sbjct: 1146 KPYEQCVECS 1155
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 QPYKEPVDCA 10
+PY++ V+C+
Sbjct: 1146 KPYEQCVECS 1155
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 3 YKEPVD 8
Y+EPVD
Sbjct: 407 YREPVD 412
>sp|TAT_HV2BE|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 1 QPYKEPVDCA 10
+PY EP C
Sbjct: 13 KPYNEPSSCT 22
>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P
Query: 1 QPYKEPVDCA 10
+P ++P DC+
Sbjct: 326 EPIRQPPDCS 335
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 5 EPVDCA 10
EP++CA
Sbjct: 343 EPIECA 348
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 2 PYKEPVDCA 10
PY P+ C+
Sbjct: 92 PYVSPIQCS 100
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 QPYKEPVDCA 10
Q + EP DC
Sbjct: 964 QGHSEPGDCG 973
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PYKEPVDC 9
P EP DC
Sbjct: 558 PETEPQDC 565
>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PYKEPVDC 9
P EP DC
Sbjct: 558 PETEPQDC 565
>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PYKEPVDC 9
P EP DC
Sbjct: 557 PETEPQDC 564
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 3 YKEPVD 8
Y+EP D
Sbjct: 407 YREPTD 412
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 QPYKEP 6
+PY EP
Sbjct: 1273 KPYSEP 1278
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 4 KEPVDC 9
+EPV+C
Sbjct: 1757 EEPVEC 1762
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 3 YKEPVD 8
YK PVD
Sbjct: 275 YKRPVD 280
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 YKEPVDCA 10
+ EP DC
Sbjct: 953 FSEPGDCG 960
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 YKEPVDCA 10
+ EP DC
Sbjct: 954 FSEPGDCG 961
71|SequenceR|360|351|TVQFLQPYKE
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 QFLQPYKE 10
QF QP +E
Sbjct: 2013 QFYQPERE 2020
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 QFLQPYKE 10
QF QP +E
Sbjct: 2013 QFYQPERE 2020
>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33
Query: 5 LQPYKE 10
L+PYKE
Sbjct: 293 LKPYKE 298
>sp|VE8E2_HPV33|PROTEIN E8^E2C|Human papillomavirus 33
Query: 5 LQPYKE 10
L+PYKE
Sbjct: 102 LKPYKE 107
72|SequenceR|365|356|LEVDLTVQFL
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 2 EVDLTVQFL 10
EVDLT+Q L
Sbjct: 28 EVDLTLQAL 36
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 2 EVDLTVQ 8
E DLTVQ
Sbjct: 170 EADLTVQ 176
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 5 LTVQFL 10
LTVQFL
Sbjct: 106 LTVQFL 111
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 LTVQFL 10
LTVQFL
Sbjct: 106 LTVQFL 111
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 5 LTVQFL 10
LTVQFL
Sbjct: 106 LTVQFL 111
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 5 LTVQFL 10
LTVQFL
Sbjct: 106 LTVQFL 111
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 5 LTVQFL 10
LTVQFL
Sbjct: 106 LTVQFL 111
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 5 LTVQFL 10
LTVQFL
Sbjct: 106 LTVQFL 111
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 EVDLTV 7
EVDLTV
Sbjct: 853 EVDLTV 858
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 LEVDLTVQFL 10
LEVDL+ L
Sbjct: 1743 LEVDLSTSVL 1752
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 LEVDLTVQFL 10
LE+D TV+ L
Sbjct: 480 LELDKTVEHL 489
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 LEVDLTVQFL 10
LE+D TV+ L
Sbjct: 480 LELDKTVEHL 489
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 LEVDLTVQFL 10
LE DLTV L
Sbjct: 98 LEADLTVNEL 107
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 LEVDLTVQFL 10
LE DLTV L
Sbjct: 98 LEADLTVNEL 107
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 1 LEVDLTVQFL 10
LE DLTV L
Sbjct: 98 LEADLTVNEL 107
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 LEVDLTVQFL 10
LE DLTV L
Sbjct: 98 LEADLTVNEL 107
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 EVDLTV 7
E+DLTV
Sbjct: 846 EIDLTV 851
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 LEVDLTVQFL 10
LE DLTV L
Sbjct: 98 LEADLTVNEL 107
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 LEVDLTVQFL 10
LE DLTV L
Sbjct: 98 LEADLTVNEL 107
73|SequenceR|370|361|KDHPQLEVDL
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 HPQLEVDL 10
HPQLE D+
Sbjct: 1921 HPQLEGDV 1928
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 2 DHPQL 6
DHPQL
Sbjct: 431 DHPQL 435
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 PQLEVDL 10
P+LEVDL
Sbjct: 1741 PRLEVDL 1747
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 PQLEVDL 10
P+L+VDL
Sbjct: 1441 PRLDVDL 1447
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KDHPQLEV 8
+D+P+LE+
Sbjct: 759 RDNPELEI 766
>sp|NEC1_HCMVM|NUCLEAR egress protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KDHPQLEV 8
++HP+LE+
Sbjct: 69 REHPELEL 76
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 PQLEVDL 10
P+LEVD
Sbjct: 1779 PRLEVDF 1785
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 PQLEVDL 10
P+LEVD
Sbjct: 1779 PRLEVDF 1785
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 4 PQLEVDL 10
P+LEVD
Sbjct: 1779 PRLEVDF 1785
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 PQLEVDL 10
P+LEVD
Sbjct: 1779 PRLEVDF 1785
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 PQLEVDL 10
P+LEVD
Sbjct: 1779 PRLEVDF 1785
>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KDHPQLEV 8
++HP+LE+
Sbjct: 69 REHPELEL 76
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 KDHPQLEVDL 10
+ HP E+D+
Sbjct: 202 RRHPTTELDI 211
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 1 KDHPQLEVDL 10
+ HP E+D+
Sbjct: 202 RRHPTTELDI 211
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 KDHPQLEVDL 10
+ HP E+D+
Sbjct: 202 RRHPTTELDI 211
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 1 KDHPQLEV 8
++HP+L V
Sbjct: 427 REHPELGV 434
>sp|VE7_HPV30|PROTEIN E7|Human papillomavirus 30
Query: 4 PQLEVDL 10
PQ E+DL
Sbjct: 17 PQTEIDL 23
>sp|VE7_HPV53|PROTEIN E7|Human papillomavirus type 53
Query: 4 PQLEVDL 10
PQ E+DL
Sbjct: 17 PQTEIDL 23
>sp|VE7_HPV56|PROTEIN E7|Human papillomavirus 56
Query: 4 PQLEVDL 10
PQ E+DL
Sbjct: 17 PQTEIDL 23
>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)
Query: 1 KDHPQL 6
KDHP L
Sbjct: 329 KDHPHL 334
>sp|VE7_HPV66|PROTEIN E7|Human papillomavirus 66
Query: 4 PQLEVDL 10
PQ E+DL
Sbjct: 17 PQTEIDL 23
74|SequenceR|375|366|TLDIVKDHPQ
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 TLDIVKDHP 9
T+D++KD P
Sbjct: 687 TVDVLKDMP 695
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 TLDIVKDHP 9
T+D++KD P
Sbjct: 687 TVDVLKDMP 695
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 TLDIVKDHP 9
T+D++KD P
Sbjct: 687 TVDVLKDMP 695
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 TLDIVKDHP 9
T+D++KD P
Sbjct: 687 TVDVLKDMP 695
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 TLDIVKDHP 9
T+D++KD P
Sbjct: 687 TVDVLKDMP 695
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 TLDIVKDHP 9
T+D++KD P
Sbjct: 687 TVDVLKDMP 695
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LDIVKDHPQ 10
L+I+KDH Q
Sbjct: 1132 LNILKDHQQ 1140
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 LDIVKDHP 9
LD+ DHP
Sbjct: 348 LDVRGDHP 355
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 LDIVKDHP 9
LD+ DHP
Sbjct: 347 LDVRGDHP 354
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 TLDIVKD 7
TLD++KD
Sbjct: 1600 TLDLLKD 1606
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 TLDIVKD 7
TLD++KD
Sbjct: 1600 TLDLLKD 1606
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 TLDIVKDHP 9
T D+V+ HP
Sbjct: 1508 TTDLVRVHP 1516
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 LDIVKDHP 9
+D+V+D P
Sbjct: 203 IDVVRDLP 210
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 DIVKDHP 9
DIV+ HP
Sbjct: 1507 DIVRVHP 1513
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 DIVKDHP 9
DIV+ HP
Sbjct: 1507 DIVRVHP 1513
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 DIVKDHP 9
DIV+ HP
Sbjct: 1507 DIVRVHP 1513
75|SequenceR|380|371|HEWPPTLDIV
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 PPTLDIV 10
PPT+D+V
Sbjct: 1970 PPTVDVV 1976
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 PPTLDIV 10
PPT+D+V
Sbjct: 1970 PPTVDVV 1976
>sp|M21_HRSVB|PROTEIN M2-1|Human respiratory syncytial virus B
Query: 2 EWPP 5
EWPP
Sbjct: 29 EWPP 32
>sp|M21_HRSVA|PROTEIN M2-1|Human respiratory syncytial virus A
Query: 2 EWPP 5
EWPP
Sbjct: 29 EWPP 32
>sp|M21_HRSV|PROTEIN M2-1|Human respiratory syncytial virus
Query: 2 EWPP 5
EWPP
Sbjct: 29 EWPP 32
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 2 EWPP 5
EWPP
Sbjct: 286 EWPP 289
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 3 WPPTLDIV 10
WP DI+
Sbjct: 154 WPTVTDII 161
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 WPPT 6
WPPT
Sbjct: 420 WPPT 423
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 WPPT 6
WPPT
Sbjct: 420 WPPT 423
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 WPPT 6
WPPT
Sbjct: 420 WPPT 423
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 HEWPPTL 7
H+W P+L
Sbjct: 859 HQWVPSL 865
>sp|VEMP_CVHOC|ENVELOPE small membrane protein|Human coronavirus OC43 (HCoV-OC43)
Query: 4 PPTLDI 9
PP LD+
Sbjct: 76 PPVLDV 81
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 HEWPPTLDIV 10
H +P T DI+
Sbjct: 1969 HLYPKTTDIL 1978
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 HEWPPTLDIV 10
H +P T DI+
Sbjct: 1969 HLYPKTTDIL 1978
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 HEWPPTLDIV 10
H +P T DI+
Sbjct: 1969 HLYPKTTDIL 1978
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 EWPP 5
+WPP
Sbjct: 415 QWPP 418
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 1 HEWPPTLDIV 10
H+ PT DI+
Sbjct: 172 HDETPTRDII 181
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 WPPTLDIV 10
WP DIV
Sbjct: 216 WPVIADIV 223
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 WPPTLDIV 10
WP DIV
Sbjct: 216 WPVIADIV 223
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 HEWPPTLDIV 10
H W +D+V
Sbjct: 506 HSWGSEMDLV 515
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 PPTLD 8
PPT+D
Sbjct: 1713 PPTID 1717
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 HEWPPTLDI 9
H W P+L +
Sbjct: 109 HAWLPSLSL 117
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HEWPPTLDI 9
H W P+L +
Sbjct: 109 HAWLPSLSL 117
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 HEWPPTLDI 9
H W P+L +
Sbjct: 109 HAWLPSLSL 117
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 1 HEWPPT 6
+EW PT
Sbjct: 207 NEWEPT 212
76|SequenceR|385|376|DKTCYHEWPP
>sp|M21_HRSVB|PROTEIN M2-1|Human respiratory syncytial virus B
Query: 5 YHEWPP 10
Y EWPP
Sbjct: 27 YFEWPP 32
>sp|M21_HRSVA|PROTEIN M2-1|Human respiratory syncytial virus A
Query: 5 YHEWPP 10
Y EWPP
Sbjct: 27 YFEWPP 32
>sp|M21_HRSV|PROTEIN M2-1|Human respiratory syncytial virus
Query: 5 YHEWPP 10
Y EWPP
Sbjct: 27 YFEWPP 32
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 4 CYHEWP 9
CY EWP
Sbjct: 103 CYAEWP 108
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 1 DKTCYHEW 8
D TC H+W
Sbjct: 211 DSTCCHDW 218
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 1 DKTCYHEW 8
+KTC H W
Sbjct: 187 NKTCCHHW 194
>sp|GLRX2_VACCC|GLUTAREDOXIN-2 virus (strain Copenhagen) (VACV)
Query: 1 DKTCYHEWPP 10
+K Y WPP
Sbjct: 112 EKATYGVWPP 121
>sp|GLRX2_MONPV|GLUTAREDOXIN-2 virus (MPXV)
Query: 1 DKTCYHEWPP 10
+K Y WPP
Sbjct: 112 EKATYGVWPP 121
>sp|GLRX2_CWPXB|GLUTAREDOXIN-2 virus (strain Brighton Red)
Query: 1 DKTCYHEWPP 10
+K Y WPP
Sbjct: 112 EKATYGVWPP 121
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 TCYHEWP 9
CY EWP
Sbjct: 102 VCYAEWP 108
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CYHEWP 9
C+H WP
Sbjct: 28 CHHTWP 33
>sp|VE7_HPV1|PROTEIN E7|Human papillomavirus type 1 (Human
Query: 1 DKTCYHEWPP 10
D CY E PP
Sbjct: 23 DLYCYEEVPP 32
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 DKTCYHEW 8
DKTC +W
Sbjct: 191 DKTCCKDW 198
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 4 CYHEWPP 10
CY E PP
Sbjct: 495 CYRECPP 501
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 1 DKTCYHEW 8
DKTC +W
Sbjct: 219 DKTCCSDW 226
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DKTCYHEWP 9
DKT +WP
Sbjct: 585 DKTSSLQWP 593
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DKTCYHEWP 9
DKT +WP
Sbjct: 585 DKTSSLQWP 593
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 DKTCYHEWP 9
DKT +WP
Sbjct: 585 DKTSSLQWP 593
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 4 CYHEWPP 10
CY E PP
Sbjct: 493 CYRECPP 499
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 3 TCYHEWPP 10
+ +HE PP
Sbjct: 1014 SSFHEIPP 1021
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 6 HEWPP 10
HEW P
Sbjct: 124 HEWTP 128
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 1 DKTCYHEW 8
DKTC +W
Sbjct: 215 DKTCCIDW 222
>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus
Query: 2 KTCYHE 7
+ CYHE
Sbjct: 264 QLCYHE 269
>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate
Query: 2 KTCYHE 7
+ CYHE
Sbjct: 264 QLCYHE 269
>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 KTCYHE 7
+ CYHE
Sbjct: 264 QLCYHE 269
>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)
Query: 2 KTCYHE 7
+ CYHE
Sbjct: 264 QLCYHE 269
>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 KTCYHE 7
+ CYHE
Sbjct: 264 QLCYHE 269
>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)
Query: 2 KTCYHE 7
+ CYHE
Sbjct: 264 QLCYHE 269
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 KTCYH 6
K+CYH
Sbjct: 593 KSCYH 597
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 DKTCYHEW 8
+KTC ++W
Sbjct: 190 NKTCCNDW 197
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 KTCYH 6
K+CYH
Sbjct: 593 KSCYH 597
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DKTCYHEW 8
DKT H W
Sbjct: 3314 DKTPVHSW 3321
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DKTCYHEW 8
DKT H W
Sbjct: 3314 DKTPVHSW 3321
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DKTCYHEW 8
DKT H W
Sbjct: 3314 DKTPVHSW 3321
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DKTCYHEW 8
DKT H W
Sbjct: 3314 DKTPVHSW 3321
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 KTCYH 6
K+CYH
Sbjct: 593 KSCYH 597
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 DKTCYHEW 8
DKTC +W
Sbjct: 215 DKTCCSDW 222
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DKTCYHEW 8
DKT H W
Sbjct: 3314 DKTPVHSW 3321
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 1 DKTCYHEW 8
D TC ++W
Sbjct: 210 DSTCCNDW 217
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 DKTCYHEW 8
DKT EW
Sbjct: 3336 DKTVVKEW 3343
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 DKTCYHEW 8
DKT EW
Sbjct: 3336 DKTVVKEW 3343
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 DKTCYHEW 8
DKT EW
Sbjct: 3337 DKTTVKEW 3344
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 DKTCYHEW 8
DKT EW
Sbjct: 3337 DKTTVKEW 3344
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 DKTCYHEW 8
DKT EW
Sbjct: 3337 DKTTIKEW 3344
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 4 CYHEW 8
C+HE+
Sbjct: 1358 CFHEY 1362
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 4 CYHEW 8
C+HE+
Sbjct: 1354 CFHEY 1358
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 DKTCYHEW 8
DKT EW
Sbjct: 3336 DKTMVKEW 3343
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 DKTCYHEW 8
DKT EW
Sbjct: 3336 DKTMVKEW 3343
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 3 TCYHEWPP 10
TC E PP
Sbjct: 460 TCQREQPP 467
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 3 TCYHEWPP 10
TC E PP
Sbjct: 425 TCQREQPP 432
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 5 YHEWPP 10
+H+W P
Sbjct: 1719 FHKWNP 1724
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 DKTCYHEW 8
DKT EW
Sbjct: 3336 DKTMVKEW 3343
>sp|UL79_HHV7J|PROTEIN U52|Human herpesvirus 7 (strain JI)
Query: 2 KTCYHEW 8
K C H W
Sbjct: 183 KICKHLW 189
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 5 YHEWPP 10
+H+W P
Sbjct: 1719 FHKWNP 1724
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 1 DKTCYHEW 8
+KTC +W
Sbjct: 188 NKTCCRDW 195
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 2 KTCYHEW 8
KTC ++W
Sbjct: 188 KTCCNDW 194
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 2 KTCYHEW 8
KTC ++W
Sbjct: 189 KTCCNDW 195
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 1 DKTCY 5
D+TCY
Sbjct: 280 DETCY 284
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 KTCYHEW 8
K C H W
Sbjct: 8 KNCQHLW 14
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 1 DKTCY 5
D+TCY
Sbjct: 280 DETCY 284
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 2 KTCYHEW 8
KTC +W
Sbjct: 193 KTCCRDW 199
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 DKTCYHEWP 9
D+T Y E P
Sbjct: 383 DETMYQEEP 391
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 1 DKTCYHEWP 9
D+T Y E P
Sbjct: 383 DETMYQEEP 391
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 DKTCYHEWP 9
D+T Y E P
Sbjct: 383 DETMYQEEP 391
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 KTCYHEW 8
K C H W
Sbjct: 10 KNCQHLW 16
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 DKTCYHEW 8
+KT H W
Sbjct: 80 NKTTQHHW 87
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 2 KTCYHEW 8
KTC +W
Sbjct: 193 KTCCRDW 199
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 TCYHEW 8
TCYH+
Sbjct: 230 TCYHQL 235
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 DKTCYHEW 8
DKT EW
Sbjct: 3335 DKTPVREW 3342
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 DKTCYHEW 8
+ C+HE+
Sbjct: 1352 EMVCFHEF 1359
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 3 TCYHEW 8
TCYH+
Sbjct: 230 TCYHQL 235
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 6 HEWPP 10
HEW P
Sbjct: 863 HEWVP 867
>sp|VE6_HPV04|PROTEIN E6|Human papillomavirus 4
Query: 1 DKTCY 5
D+TCY
Sbjct: 119 DETCY 123
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 1 DKTCYHEW 8
+KTC +W
Sbjct: 191 NKTCCGDW 198
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 TCYHEWPP 10
TC +W P
Sbjct: 398 TCRGQWNP 405
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 6 HEWPP 10
HEW P
Sbjct: 862 HEWVP 866
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 4 CYHEW 8
C+H W
Sbjct: 297 CFHFW 301
77|SequenceR|390|381|ISPNVDKTCY
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 SPNVDKT 8
SPNVD T
Sbjct: 332 SPNVDST 338
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 2 SPNVDKTCY 10
SP D CY
Sbjct: 265 SPQTDNPCY 273
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SPNVDKTCY 10
SPN + CY
Sbjct: 603 SPNYPELCY 611
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SPNVDKTCY 10
SPN + CY
Sbjct: 603 SPNYPELCY 611
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 1 ISPNVDKTCY 10
+SPN D Y
Sbjct: 688 VSPNTDVRTY 697
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 ISPNVDK 7
I+P+VDK
Sbjct: 209 ITPHVDK 215
Query: 4 NVDKTC 9
++DKTC
Sbjct: 3345 SIDKTC 3350
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 2 SPNVDKTC 9
SP V KTC
Sbjct: 166 SPGVTKTC 173
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 ISPNVDKTCY 10
+SPN D Y
Sbjct: 687 VSPNTDVRMY 696
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 3 PNVDKTCY 10
PN K+C+
Sbjct: 460 PNTGKSCF 467
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 3 PNVDKTCY 10
PN K+C+
Sbjct: 461 PNTGKSCF 468
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ISPNVD 6
++PNVD
Sbjct: 664 VTPNVD 669
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ISPNVD 6
++PNVD
Sbjct: 664 VTPNVD 669
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 PNVDKTCY 10
P V K CY
Sbjct: 611 PEVKKGCY 618
>sp|VP30_MABVA|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 PNVDKT 8
PN DKT
Sbjct: 116 PNTDKT 121
>sp|VP30_MABVM|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 PNVDKT 8
PN DKT
Sbjct: 116 PNTDKT 121
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 PNVDKTCY 10
P V K CY
Sbjct: 612 PEVRKGCY 619
>sp|VP30_MABVP|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 PNVDKT 8
PN DKT
Sbjct: 116 PNTDKT 121
>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 SPNVDKT 8
+P++DKT
Sbjct: 223 TPDIDKT 229
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 1 ISPNVDKTC 9
I N DK C
Sbjct: 14 IHTNADKIC 22
>sp|NS1_INCTA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 SPNVDKT 8
+P++DKT
Sbjct: 223 TPDIDKT 229
>sp|NS1_INCJH|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 SPNVDKT 8
+P++DKT
Sbjct: 223 TPDIDKT 229
>sp|NS1_INCGL|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Great
Query: 2 SPNVDKT 8
+P++DKT
Sbjct: 223 TPDIDKT 229
>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 SPNVDKT 8
+P++DKT
Sbjct: 228 TPDIDKT 234
>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)
Query: 2 SPNVDKT 8
+P++DKT
Sbjct: 223 TPDIDKT 229
>sp|NS1_INCCA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/California/1978)
Query: 2 SPNVDKT 8
+P++DKT
Sbjct: 228 TPDIDKT 234
>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)
Query: 2 SPNVDKT 8
+P++DKT
Sbjct: 228 TPDIDKT 234
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 1 ISPNVDKTC 9
I N DK C
Sbjct: 14 IHTNADKIC 22
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 1 ISPNVDKTC 9
I N DK C
Sbjct: 14 IHTNADKIC 22
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 3 PNVDKTCY 10
P V + CY
Sbjct: 614 PEVQRGCY 621
78|SequenceR|395|386|HSSFLISPNV
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 SSFLISPNV 10
++FL++PNV
Sbjct: 2456 AAFLVNPNV 2464
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 SSFLISPNV 10
++FL++PNV
Sbjct: 2456 AAFLVNPNV 2464
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 SSFLISPNV 10
++FL++PNV
Sbjct: 2456 AAFLVNPNV 2464
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 SSFLISPNV 10
++FL++PNV
Sbjct: 2456 AAFLVNPNV 2464
>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)
Query: 1 HSSFLISPNV 10
+S +LI+PN+
Sbjct: 189 YSLYLINPNI 198
>sp|PAP1_VARV|POLY(A) polymerase catalytic subunit|Variola virus
Query: 1 HSSFLISPNV 10
+S +LI+PN+
Sbjct: 189 YSLYLINPNI 198
>sp|PAP1_VAR67|POLY(A) polymerase catalytic subunit|Variola virus (isolate
Query: 1 HSSFLISPNV 10
+S +LI+PN+
Sbjct: 189 YSLYLINPNI 198
>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 1 HSSFLISPNV 10
+S +LI+PN+
Sbjct: 189 YSLYLINPNI 198
>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 1 HSSFLISPNV 10
+S +LI+PN+
Sbjct: 189 YSLYLINPNI 198
>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)
Query: 1 HSSFLISPNV 10
+S +LI+PN+
Sbjct: 189 YSLYLINPNI 198
>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HSSFLISPNV 10
+S +LI+PN+
Sbjct: 189 YSLYLINPNI 198
>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)
Query: 1 HSSFLISPNV 10
+S +LI+PN+
Sbjct: 189 YSLYLINPNI 198
>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 1 HSSFLISPNV 10
+S +LI+PN+
Sbjct: 189 YSLYLINPNI 198
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 1 HSSFLISP 8
H SF+ SP
Sbjct: 219 HQSFVPSP 226
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 1 HSSFLISPNV 10
HS+ ++ P V
Sbjct: 398 HSNIMLEPEV 407
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 2 SSFLISPNV 10
++ L+SPN+
Sbjct: 443 TAALVSPNI 451
79|SequenceR|400|391|DQHEQHSSFL
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 DQHEQH 6
D+HE+H
Sbjct: 1377 DKHEEH 1382
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 QHEQHSS 8
QHEQ+S+
Sbjct: 306 QHEQNST 312
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 3 HEQHSSF 9
HEQH ++
Sbjct: 167 HEQHKTY 173
80|SequenceR|405|396|GLALTDQHEQ
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 4 LTDQHEQ 10
LTDQH +
Sbjct: 589 LTDQHAR 595
>sp|VP24_MABVA|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 GLALTDQHEQ 10
G+AL DQ Q
Sbjct: 99 GVALKDQELQ 108
>sp|VP24_MABVR|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 GLALTDQHEQ 10
G+AL DQ Q
Sbjct: 99 GVALKDQELQ 108
>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 GLALTDQHEQ 10
G+AL DQ Q
Sbjct: 99 GVALKDQELQ 108
>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 GLALTDQHEQ 10
G+AL DQ Q
Sbjct: 99 GVALKDQELQ 108
>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 GLALTDQHEQ 10
G+AL DQ Q
Sbjct: 99 GVALKDQELQ 108
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 1 GLALTDQ 7
G+ALTD+
Sbjct: 608 GIALTDK 614
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 1 GLALTDQ 7
G+ALTD+
Sbjct: 608 GIALTDK 614
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 LALTDQHE 9
L LTD+H+
Sbjct: 89 LTLTDKHD 96
>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LALTDQHE 9
L LTD+H+
Sbjct: 89 LTLTDKHD 96
>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LALTDQHE 9
L LTD+H+
Sbjct: 89 LTLTDKHD 96
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GLALTDQHEQ 10
G+A T QH +
Sbjct: 76 GVAFTWQHNE 85
>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GLALTDQHEQ 10
G+A T QH +
Sbjct: 76 GVAFTWQHNE 85
81|SequenceR|410|401|IPAQGGLALT
>sp|VL2_HPV54|MINOR capsid protein L2|Human papillomavirus type 54
Query: 1 IPAQGGLAL 9
IP+QGG +
Sbjct: 122 IPSQGGFEI 130
>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7
Query: 1 IPAQGGLALT 10
IP +GG ++T
Sbjct: 127 IPTEGGFSIT 136
>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40
Query: 1 IPAQGGLALT 10
IP +GG ++T
Sbjct: 127 IPTEGGFSVT 136
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 IPAQGGLAL 9
IPA GG ++
Sbjct: 977 IPAAGGTSI 985
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 AQGGLALT 10
A+GGLA T
Sbjct: 551 ARGGLAAT 558
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 1 IPAQGGLALT 10
IP+ GG +T
Sbjct: 128 IPSHGGFEVT 137
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PAQGGLAL 9
P QGG+ +
Sbjct: 1484 PPQGGMGM 1491
>sp|VL2_HPV11|MINOR capsid protein L2|Human papillomavirus 11
Query: 2 PAQGGLALT 10
P QGG +T
Sbjct: 123 PTQGGFTIT 131
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 1 IPAQGGLA 8
+PA+ GLA
Sbjct: 32 MPARNGLA 39
>sp|VL2_HPV6A|MINOR capsid protein L2|Human papillomavirus type 6a
Query: 2 PAQGGLALT 10
PA GG +T
Sbjct: 124 PAHGGFTIT 132
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 AQGGLAL 9
+QGGL+L
Sbjct: 1897 SQGGLSL 1903
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 AQGGLAL 9
+QGGL+L
Sbjct: 1897 SQGGLSL 1903
>sp|VL2_HPV6B|MINOR capsid protein L2|Human papillomavirus type 6b
Query: 2 PAQGGLALT 10
PA GG +T
Sbjct: 124 PAHGGFTIT 132
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 IPAQGGLA 8
+PA+ GLA
Sbjct: 32 MPARNGLA 39
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 IPAQGGLA 8
+PA+ GLA
Sbjct: 32 MPARNGLA 39
82|SequenceR|415|406|DPPIDIPAQG
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 PPIDIPAQ 9
PPIDIP +
Sbjct: 373 PPIDIPGE 380
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 PPIDIPAQ 9
PPIDIP +
Sbjct: 373 PPIDIPGE 380
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 PPIDIPAQ 9
PPIDIP +
Sbjct: 372 PPIDIPGE 379
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 PPIDIPAQ 9
PPIDIP +
Sbjct: 372 PPIDIPGE 379
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 PPIDIPAQ 9
PPIDIP +
Sbjct: 372 PPIDIPGE 379
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 PPIDIPAQ 9
PPIDIP +
Sbjct: 372 PPIDIPGE 379
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 1 DPPIDIPAQG 10
+PPIDIP G
Sbjct: 165 EPPIDIPQAG 174
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 1 DPPIDIPAQG 10
+PP+DIP G
Sbjct: 165 EPPVDIPQSG 174
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 PPIDIPAQ 9
PP+DIP +
Sbjct: 363 PPMDIPGE 370
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 2 PPIDIPAQ 9
PP+DIP +
Sbjct: 363 PPLDIPGE 370
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PIDIPA 8
P+DIPA
Sbjct: 89 PVDIPA 94
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PIDIPA 8
P+DIPA
Sbjct: 89 PVDIPA 94
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PIDIPA 8
P+DIPA
Sbjct: 89 PVDIPA 94
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 PPIDIPAQ 9
PPI IP +
Sbjct: 373 PPIHIPGE 380
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 PPIDIPAQ 9
PPI IP +
Sbjct: 372 PPIHIPGE 379
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 PPIDIPAQ 9
PPI IP +
Sbjct: 355 PPIHIPGE 362
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 DPPIDIPAQ 9
D P +PAQ
Sbjct: 626 DGPCKVPAQ 634
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 DPPIDIPAQ 9
D P +PAQ
Sbjct: 626 DGPCKVPAQ 634
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 DPPIDIPAQG 10
DP +PAQ
Sbjct: 535 DPEASLPAQA 544
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 3 PIDIPAQG 10
P++ P QG
Sbjct: 634 PLEFPKQG 641
>sp|REV_HV2BE|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 DPPIDIP 7
DPP D+P
Sbjct: 86 DPPTDLP 92
>sp|REV_HV2D1|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 DPPIDIP 7
DPP D+P
Sbjct: 86 DPPTDLP 92
>sp|REV_HV2G1|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 DPPIDIP 7
DPP D+P
Sbjct: 86 DPPTDLP 92
83|SequenceR|420|411|YHRPNDPPID
>sp|CEP3_HHV2H|CYTOPLASMIC envelopment protein 3|Human herpesvirus 2 (strain HG52)
Query: 1 YHRPNDPP 8
Y RP+DPP
Sbjct: 63 YRRPSDPP 70
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 2 HRPNDPPID 10
H P D P+D
Sbjct: 466 HLPTDTPLD 474
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 2 HRPNDPPID 10
H P D P+D
Sbjct: 466 HLPTDTPLD 474
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 RPNDPP 8
RPN PP
Sbjct: 1665 RPNLPP 1670
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YHRPNDPPI 9
Y RP +PP+
Sbjct: 633 YTRPTEPPL 641
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 HRPNDP 7
HRPN P
Sbjct: 2277 HRPNRP 2282
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YHRPNDPPI 9
Y RP +PP+
Sbjct: 632 YTRPTEPPL 640
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 PNDPPI 9
P DPP+
Sbjct: 2773 PGDPPV 2778
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 PNDPPI 9
P DPP+
Sbjct: 2773 PGDPPV 2778
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 4 PNDPPI 9
PN PPI
Sbjct: 752 PNQPPI 757
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 YHRPND 6
+H PND
Sbjct: 711 FHHPND 716
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 YHRPNDPPID 10
Y + N PP D
Sbjct: 1742 YFQNNTPPTD 1751
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 2 HRPNDPPI 9
H P+D PI
Sbjct: 443 HLPDDDPI 450
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 YHRPNDPPID 10
Y + N PP D
Sbjct: 1742 YFQNNTPPTD 1751
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 YHRPNDPP 8
+ RP PP
Sbjct: 686 FKRPKTPP 693
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 1 YHRPNDPP 8
YH ND P
Sbjct: 85 YHVTNDCP 92
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 1 YHRPNDPP 8
YH ND P
Sbjct: 85 YHVTNDCP 92
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 1 YHRPNDPP 8
YH ND P
Sbjct: 73 YHVTNDCP 80
>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)
Query: 1 YHRPNDPP 8
YH ND P
Sbjct: 85 YHVTNDCP 92
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 YHRPNDPP 8
+ RP PP
Sbjct: 682 FKRPKTPP 689
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 4 PNDPPID 10
PNDP D
Sbjct: 381 PNDPTAD 387
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 4 PNDPPID 10
PNDP D
Sbjct: 381 PNDPTAD 387
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 4 PNDPPID 10
PNDP D
Sbjct: 381 PNDPTAD 387
>sp|DUT_HHV2H|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 2 (strain
Query: 4 PNDPPI 9
P DPPI
Sbjct: 338 PRDPPI 343
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 PNDPPI 9
P DPP+
Sbjct: 140 PTDPPL 145
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PNDPPI 9
P DPP+
Sbjct: 140 PTDPPL 145
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 PNDPPI 9
P DPP+
Sbjct: 140 PTDPPL 145
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 1 YHRPNDPP 8
+H P +PP
Sbjct: 169 HHGPLEPP 176
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 2 HRPND 6
H PND
Sbjct: 193 HHPND 197
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 2 HRPND 6
H PND
Sbjct: 193 HHPND 197
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 2 HRPND 6
H PND
Sbjct: 193 HHPND 197
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 4 PNDPPI 9
P DPPI
Sbjct: 219 PADPPI 224
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 4 PNDPPID 10
PNDP D
Sbjct: 381 PNDPTAD 387
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 4 PNDPPID 10
PNDP D
Sbjct: 381 PNDPTAD 387
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 4 PNDPPID 10
PNDP D
Sbjct: 381 PNDPTAD 387
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 4 PNDPPI 9
P DPP+
Sbjct: 189 PKDPPL 194
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 PNDPP 8
P DPP
Sbjct: 2769 PGDPP 2773
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 PNDPP 8
P DPP
Sbjct: 2770 PGDPP 2774
Query: 1 YHRPNDPP 8
YH ND P
Sbjct: 201 YHVTNDCP 208
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 4 PNDPPID 10
PNDP D
Sbjct: 381 PNDPTAD 387
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 4 PNDPP 8
P DPP
Sbjct: 2792 PGDPP 2796
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 PNDPP 8
P DPP
Sbjct: 2769 PGDPP 2773
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 PNDPP 8
P DPP
Sbjct: 2769 PGDPP 2773
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 PNDPP 8
P DPP
Sbjct: 2770 PGDPP 2774
Query: 1 YHRPNDPP 8
YH ND P
Sbjct: 201 YHVTNDCP 208
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 PNDPP 8
P DPP
Sbjct: 2769 PGDPP 2773
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 HRPND 6
H PND
Sbjct: 195 HHPND 199
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 PNDPP 8
P DPP
Sbjct: 2770 PGDPP 2774
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 HRPND 6
H PND
Sbjct: 195 HHPND 199
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 PNDPP 8
P DPP
Sbjct: 2792 PGDPP 2796
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 PNDPP 8
P DPP
Sbjct: 2769 PGDPP 2773
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 PNDPP 8
P DPP
Sbjct: 2770 PGDPP 2774
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 PNDPP 8
P DPP
Sbjct: 2770 PGDPP 2774
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 HRPND 6
H PND
Sbjct: 195 HHPND 199
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 HRPND 6
H PND
Sbjct: 195 HHPND 199
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 HRPND 6
H PND
Sbjct: 195 HHPND 199
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 HRPND 6
H PND
Sbjct: 195 HHPND 199
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 HRPND 6
H PND
Sbjct: 195 HHPND 199
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 2 HRPND 6
H PND
Sbjct: 195 HHPND 199
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 PNDPP 8
P DPP
Sbjct: 2769 PGDPP 2773
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 PNDPP 8
P DPP
Sbjct: 2796 PGDPP 2800
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 HRPND 6
H PND
Sbjct: 184 HHPND 188
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 HRPNDPP 8
+ P+DPP
Sbjct: 791 YEPSDPP 797
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 HRPNDPP 8
+ P+DPP
Sbjct: 791 YEPSDPP 797
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 HRPND 6
H PND
Sbjct: 195 HHPND 199
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 2 HRPND 6
H PND
Sbjct: 193 HHPND 197
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 2 HRPNDPP 8
H+P PP
Sbjct: 1053 HQPTSPP 1059
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 4 PNDPP 8
P DPP
Sbjct: 2778 PGDPP 2782
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 2 HRPND 6
H PND
Sbjct: 195 HHPND 199
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 HRPND 6
H PND
Sbjct: 184 HHPND 188
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 HRPND 6
H PND
Sbjct: 187 HHPND 191
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 PNDPP 8
P DPP
Sbjct: 2792 PGDPP 2796
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 2 HRPND 6
H PND
Sbjct: 195 HHPND 199
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 HRPND 6
H PND
Sbjct: 184 HHPND 188
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 HRPND 6
H PND
Sbjct: 184 HHPND 188
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 HRPND 6
H PND
Sbjct: 195 HHPND 199
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 YHRPNDPP 8
YH ND P
Sbjct: 201 YHLTNDCP 208
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 YHRPNDPP 8
YH ND P
Sbjct: 201 YHLTNDCP 208
>sp|PG052_VAR67|PROTEIN OPG052|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 HRPNDPP 8
HRP PP
Sbjct: 20 HRPRTPP 26
84|SequenceR|425|416|FGSQGYHRPN
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 GSQGYHRPN 10
G G+HRP+
Sbjct: 1223 GEVGHHRPS 1231
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 GSQGYHRPN 10
G G+HRP+
Sbjct: 1223 GEVGHHRPS 1231
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 3 SQGYHRPN 10
+Q YH PN
Sbjct: 280 TQLYHDPN 287
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 6 YHRPN 10
YHRP+
Sbjct: 1501 YHRPS 1505
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 6 YHRPN 10
YHRP+
Sbjct: 1501 YHRPS 1505
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 6 YHRPN 10
YHRP+
Sbjct: 1501 YHRPS 1505
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 1 FGSQGYHR 8
FGS G H+
Sbjct: 296 FGSLGIHK 303
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 FGSQGYHR 8
FGS G H+
Sbjct: 296 FGSLGIHK 303
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FGSQGYHR 8
FGS G H+
Sbjct: 296 FGSLGIHK 303
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 FGSQGYHR 8
FGS G H+
Sbjct: 296 FGSLGIHK 303
>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)
Query: 1 FGSQGYHR 8
FGS G H+
Sbjct: 298 FGSLGIHK 305
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 SQGYHRPN 10
+ G HRP+
Sbjct: 183 TSGLHRPH 190
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SQGYHRPN 10
+ G HRP+
Sbjct: 183 TSGLHRPH 190
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SQGYHRPN 10
+ G HRP+
Sbjct: 184 TSGLHRPH 191
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 GSQGYHRPN 10
G G HRP+
Sbjct: 1222 GQIGQHRPS 1230
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 1 FGSQGYHRP 9
G QG+H P
Sbjct: 767 IGYQGFHVP 775
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 1 FGSQGYHRP 9
G QG+H P
Sbjct: 747 IGYQGFHVP 755
>sp|Y137_ADE02|UNCHARACTERIZED protein B-137|Human adenovirus C serotype 2
Query: 3 SQGYH 7
SQGYH
Sbjct: 74 SQGYH 78
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 2 GSQGYH 7
G+Q YH
Sbjct: 915 GAQNYH 920
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 GSQGYH 7
G+Q YH
Sbjct: 913 GAQNYH 918
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 2 GSQGYH 7
G+Q YH
Sbjct: 914 GAQNYH 919
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 GSQGYH 7
G+Q YH
Sbjct: 934 GAQNYH 939
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 6 YHRPN 10
YH PN
Sbjct: 426 YHSPN 430
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 6 YHRPN 10
YH PN
Sbjct: 426 YHSPN 430
85|SequenceR|430|421|CLSAFFGSQG
>sp|ORF49_HHV8P|PROTEIN ORF49|Human herpesvirus 8 type P
Query: 1 CLSAFFGSQG 10
CLS F G+ G
Sbjct: 148 CLSHFVGASG 157
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 CLSAFFG 7
CL +FFG
Sbjct: 652 CLESFFG 658
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 1 CLSAFFG 7
CL+ FFG
Sbjct: 497 CLTFFFG 503
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CLSAFFG 7
CL+ FFG
Sbjct: 497 CLTFFFG 503
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CLSAFFG 7
CL+ FFG
Sbjct: 497 CLTFFFG 503
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 CLSAFFG 7
CL+ FFG
Sbjct: 497 CLTFFFG 503
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 303 CMKTFFG 309
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 306 CMKTFFG 312
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 303 CMKTFFG 309
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 287 CMKTFFG 293
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 1 CLSAFFG 7
C+ FFG
Sbjct: 310 CMKTFFG 316
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 1 CLSAFFGS 8
CL +FGS
Sbjct: 304 CLRGWFGS 311
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LSAFFGSQ 9
+ FFGSQ
Sbjct: 120 IDQFFGSQ 127
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LSAFFGSQ 9
+ FFGSQ
Sbjct: 120 IDQFFGSQ 127
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LSAFFGSQ 9
+ FFGSQ
Sbjct: 119 IDQFFGSQ 126
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 CLSAFFGS 8
CL +FGS
Sbjct: 304 CLRGWFGS 311
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin)
Query: 1 CLSAFFG 7
C SAF G
Sbjct: 59 CTSAFLG 65
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169)
Query: 1 CLSAFFG 7
C SAF G
Sbjct: 59 CTSAFLG 65
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CLSAFFGSQG 10
CL F G G
Sbjct: 37 CLIEFLGDSG 46
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 CLSAFFGSQG 10
C +F GS+G
Sbjct: 307 CKCSFIGSRG 316
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 1 CLSAFF 6
CL+A+F
Sbjct: 149 CLNAYF 154
86|SequenceR|435|426|KQDQWCLSAF
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KQDQWCLS 8
++DQWC S
Sbjct: 3333 REDQWCGS 3340
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KQDQWCLS 8
++DQWC S
Sbjct: 3333 REDQWCGS 3340
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 KQDQWCLS 8
++DQWC S
Sbjct: 3367 REDQWCGS 3374
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KQDQWCLS 8
++DQWC S
Sbjct: 3333 REDQWCGS 3340
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KQDQWCLS 8
++DQWC S
Sbjct: 3330 REDQWCGS 3337
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 KQDQWCLS 8
++DQWC S
Sbjct: 3333 REDQWCGS 3340
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KQDQWCLS 8
++DQWC S
Sbjct: 3333 REDQWCGS 3340
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KQDQWCLS 8
++DQWC S
Sbjct: 3333 REDQWCGS 3340
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 KQDQWCLS 8
++DQWC S
Sbjct: 3370 REDQWCGS 3377
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 KQDQWCLS 8
++DQWC S
Sbjct: 3332 REDQWCGS 3339
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 KQDQWCLS 8
++DQWC S
Sbjct: 3365 REDQWCGS 3372
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 KQDQWCLS 8
++DQWC S
Sbjct: 3332 REDQWCGS 3339
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 KQDQWCLS 8
++DQWC S
Sbjct: 3332 REDQWCGS 3339
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 KQDQWCLS 8
++DQWC S
Sbjct: 3332 REDQWCGS 3339
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 KQDQWCLS 8
++DQWC S
Sbjct: 3332 REDQWCGS 3339
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 KQDQWCLS 8
++DQWC S
Sbjct: 3334 REDQWCGS 3341
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 KQDQWCLS 8
++DQWC S
Sbjct: 3333 REDQWCGS 3340
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 1 KQDQWC 6
+QD WC
Sbjct: 369 RQDYWC 374
>sp|ORF49_HHV8P|PROTEIN ORF49|Human herpesvirus 8 type P
Query: 4 QWCLSAF 10
+WCLS F
Sbjct: 146 EWCLSHF 152
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 5 WCLSAF 10
WC++AF
Sbjct: 236 WCIAAF 241
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 3 DQWCL 7
D WCL
Sbjct: 60 DMWCL 64
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 4 QWCLS 8
QWC S
Sbjct: 554 QWCFS 558
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 3 DQWCL 7
D WCL
Sbjct: 59 DAWCL 63
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 3 DQWCL 7
D WCL
Sbjct: 59 DAWCL 63
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 5 WCLSAF 10
WC++AF
Sbjct: 222 WCVAAF 227
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 5 WCLSAF 10
WC++AF
Sbjct: 216 WCVAAF 221
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 KQDQW 5
+QDQW
Sbjct: 2922 EQDQW 2926
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 KQDQWCLS 8
K++ WC++
Sbjct: 787 KEETWCIN 794
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 KQDQWCL 7
K + WCL
Sbjct: 1981 KPNTWCL 1987
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 KQDQWCL 7
K + WCL
Sbjct: 1981 KPNTWCL 1987
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 5 WCLSAF 10
W LSAF
Sbjct: 161 WMLSAF 166
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 QWCLS 8
QWC S
Sbjct: 383 QWCRS 387
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 QWCLS 8
QWC S
Sbjct: 383 QWCRS 387
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 QWCLS 8
QWC S
Sbjct: 383 QWCRS 387
87|SequenceR|440|431|FSKESKQDQW
>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)
Query: 1 FSKESKQDQW 10
F+K + +D W
Sbjct: 279 FTKSTNKDTW 288
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 1 FSKESKQDQW 10
F+K + +D W
Sbjct: 279 FTKSTNKDTW 288
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 FSKESKQD 8
++KE+KQD
Sbjct: 392 WAKEAKQD 399
>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FSKESKQDQW 10
F+K + +D W
Sbjct: 279 FTKSTNKDTW 288
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 FSKESKQDQ 9
++KE K+DQ
Sbjct: 394 WAKEYKEDQ 402
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 FSKESKQDQ 9
++KE K+DQ
Sbjct: 394 WAKEYKEDQ 402
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 4 ESKQDQW 10
+S+QD W
Sbjct: 367 KSRQDYW 373
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 FSKESKQDQ 9
++KE K+DQ
Sbjct: 394 WAKEYKEDQ 402
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 FSKESKQ 7
SKESKQ
Sbjct: 489 LSKESKQ 495
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 FSKESKQDQ 9
++KE K+DQ
Sbjct: 394 WAKEYKEDQ 402
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 1 FSKESKQD 8
FSK+ +QD
Sbjct: 139 FSKDDRQD 146
88|SequenceR|445|436|HDEECFSKES
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 1 HDEECFSK 8
+D ECF+K
Sbjct: 373 NDVECFTK 380
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 1 HDEECFSK 8
+D ECF+K
Sbjct: 373 NDVECFTK 380
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HDEECFSK 8
+D ECF+K
Sbjct: 373 NDVECFTK 380
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 HDEECFS 7
H E CFS
Sbjct: 349 HTEPCFS 355
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 DEECFS 7
DE+CF+
Sbjct: 1636 DEKCFA 1641
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 DEECFS 7
DE+CF+
Sbjct: 1636 DEKCFA 1641
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 DEECFSKES 10
DE+C S ES
Sbjct: 560 DEQCASMES 568
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 DEECFSKE 9
D ECF E
Sbjct: 2281 DHECFGCE 2288
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 DEECFSKE 9
D ECF E
Sbjct: 2281 DHECFGCE 2288
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 DEECFSKE 9
D ECF E
Sbjct: 2281 DHECFGCE 2288
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 EECFSKE 9
E+CF+K+
Sbjct: 1983 EDCFTKD 1989
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 HDEECF 6
H+E+C+
Sbjct: 1894 HEEKCY 1899
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 HDEECF 6
H+E+C+
Sbjct: 1933 HEEKCY 1938
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 HDEECF 6
H+E+C+
Sbjct: 1933 HEEKCY 1938
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 HDEECF 6
H+E+C+
Sbjct: 1934 HEEKCY 1939
89|SequenceR|450|441|NVLAAHDEEC
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 NVLAAHDEEC 10
N+ + HD+ C
Sbjct: 6154 NLQSNHDQHC 6163
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 NVLAAHDEE 9
N+L+ +D+E
Sbjct: 830 NILSTYDKE 838
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 203 NILRTQESEC 212
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 203 NILRTQESEC 212
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 222 NILRTQESEC 231
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 222 NILRTQESEC 231
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 222 NILRTQESEC 231
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 194 NILRTQESEC 203
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 202 NILRTQESEC 211
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 202 NILRTQESEC 211
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 207 NILRTQESEC 216
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 202 NILRTQESEC 211
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 202 NILRTQESEC 211
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 202 NILRTQESEC 211
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 202 NILRTQESEC 211
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 202 NILRTQESEC 211
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 222 NILRTQESEC 231
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 222 NILRTQESEC 231
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 202 NILRTQESEC 211
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 222 NILRTQESEC 231
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 NVLAAHDEE 9
N+L+ +D+E
Sbjct: 829 NILSVYDKE 837
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 202 NILRTQESEC 211
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AKHIEEC 278
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHIEEC 278
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 249 AQHVEEC 255
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 198 NILRTQESEC 207
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHIEEC 278
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHIEEC 278
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHIEEC 278
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHIEEC 278
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHIEEC 278
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 272 AQHVEEC 278
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 221 NILRTQESEC 230
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 6 HDEEC 10
HDE C
Sbjct: 1029 HDEHC 1033
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 270 AKHIEEC 276
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 219 NILRTQESEC 228
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 4 AAHDEEC 10
A H EEC
Sbjct: 270 AKHIEEC 276
Query: 1 NVLAAHDEEC 10
N+L + EC
Sbjct: 219 NILRTQESEC 228
90|SequenceR|455|446|QESEQNVLAA
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QESEQNVL 8
QESE N+L
Sbjct: 2264 QESESNIL 2271
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2058 QNTLQNVLAA 2067
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2051 QNTLQNVLAA 2060
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2010 QNTLQNVLAA 2019
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2055 QNTLQNVLAA 2064
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2078 QNTLQNVLAA 2087
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2018 QNTLQNVLAA 2027
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 1992 QNTLQNVLAA 2001
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2055 QNTLQNVLAA 2064
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2055 QNTLQNVLAA 2064
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2048 QNTLQNVLAA 2057
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2048 QNTLQNVLAA 2057
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2061 QNTLQNVLAA 2070
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2077 QNTLQNVLAA 2086
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2069 QNTLQNVLAA 2078
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2077 QNTLQNVLAA 2086
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2083 QNTLQNVLAA 2092
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2094 QNTLQNVLAA 2103
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2095 QNTLQNVLAA 2104
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 2094 QNTLQNVLAA 2103
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 QESEQNVLAA 10
Q + QNVLAA
Sbjct: 730 QNTLQNVLAA 739
91|SequenceR|460|451|LEDDSQESEQ
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 LEDDSQES 8
L+DDSQ++
Sbjct: 980 LDDDSQQT 987
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LEDDSQES 8
L+DDSQ++
Sbjct: 980 LDDDSQQT 987
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 2 EDDSQESE 9
E+D+QESE
Sbjct: 529 EEDAQESE 536
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 4 DSQESEQ 10
DSQ+SE+
Sbjct: 679 DSQDSEE 685
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 LEDDSQ 6
LEDDSQ
Sbjct: 1866 LEDDSQ 1871
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 LEDDSQ 6
LEDDSQ
Sbjct: 1865 LEDDSQ 1870
92|SequenceR|465|456|SSLTLLEDDS
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 SSLTLLEDDS 10
S+ TLL +DS
Sbjct: 134 STQTLLNEDS 143
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 2 SLTLLEDD 9
SLT+LE D
Sbjct: 434 SLTILEGD 441
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 SSLTLLEDDS 10
S LTLLED +
Sbjct: 653 SLLTLLEDKA 662
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 SLTLLED 8
S+TLLED
Sbjct: 1447 SMTLLED 1453
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 SSLTLLEDDS 10
S LTLLED +
Sbjct: 653 SLLTLLEDKA 662
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 2 SLTLLED 8
+LT+LED
Sbjct: 659 NLTMLED 665
93|SequenceR|470|461|ANGHPSSLTL
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn
Query: 4 HPSSLTL 10
HPSSL L
Sbjct: 34 HPSSLLL 40
>sp|US20_HCMVM|MEMBRANE protein US20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ANGHPSSLTL 10
N HPS+ T+
Sbjct: 82 GNEHPSNATV 91
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 4 HPSSLT 9
HPSS+T
Sbjct: 308 HPSSIT 313
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 NGHPSSL 8
NGHP L
Sbjct: 492 NGHPIGL 498
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 ANGHPSSLT 9
A HP SLT
Sbjct: 201 ATEHPESLT 209
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 ANGHPSSLTL 10
A+GHP + L
Sbjct: 673 AHGHPHEIIL 682
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 ANGHPSSLTL 10
A+GHP + L
Sbjct: 673 AHGHPHEIIL 682
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 ANGHPSSLTL 10
A+GHP + L
Sbjct: 672 AHGHPHEIIL 681
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 ANGHPSSLTL 10
A+GHP + L
Sbjct: 672 AHGHPHEIIL 681
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 ANGHPSSLTL 10
A+GHP + L
Sbjct: 673 AHGHPHEIIL 682
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 ANGHPSSLTL 10
A+GHP + L
Sbjct: 672 AHGHPHEIIL 681
>sp|US20_HCMVT|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 ANGHPSSLTL 10
N HPS+ T+
Sbjct: 170 GNEHPSNATV 179
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 ANGHPSSLTL 10
A+GHP + L
Sbjct: 673 AHGHPHEIIL 682
>sp|US20_HCMVA|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ANGHPSSLTL 10
N HPS+ T+
Sbjct: 170 GNEHPSNATV 179
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 2 NGHPSSLT 9
NG PS+++
Sbjct: 424 NGQPSAIS 431
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 2 NGHPSSLT 9
NG PS+++
Sbjct: 424 NGQPSAIS 431
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 2 NGHPSSLT 9
NG PS+++
Sbjct: 424 NGQPSAIS 431
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 2 NGHPSSLT 9
NG PS+++
Sbjct: 424 NGQPSAIS 431
94|SequenceR|475|466|PKDGNANGHP
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 DGNANGHP 10
DGN N HP
Sbjct: 208 DGNENSHP 215
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 GNANGHP 10
GN N HP
Sbjct: 209 GNENSHP 215
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 1 PKDGNANGHP 10
P D NG+P
Sbjct: 638 PDDEEENGNP 647
>sp|NS1_I80AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/India/6263/1980
Query: 2 KDGNANGHP 10
K N NG P
Sbjct: 204 KSSNENGRP 212
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 1 PKDGNANGHP 10
P D NG P
Sbjct: 636 PDDEEENGEP 645
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 PKDGNANGH 9
P+ GN GH
Sbjct: 1265 PEGGNPTGH 1273
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 PKDGNANGH 9
P+ GN GH
Sbjct: 1265 PEGGNPTGH 1273
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 PKDGNANGH 9
P+ GN GH
Sbjct: 1265 PEGGNPTGH 1273
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 PKDGNANGH 9
P+ GN GH
Sbjct: 1265 PEGGNPTGH 1273
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 PKDGNANGH 9
P GN+ GH
Sbjct: 451 PTRGNSLGH 459
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 PKDGNANGH 9
P+ GN GH
Sbjct: 1265 PEGGNPTGH 1273
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 PKDGNANGH 9
P+ GN GH
Sbjct: 1265 PEGGNPTGH 1273
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 PKDGNANGH 9
P+ GN GH
Sbjct: 1265 PEGGNPTGH 1273
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 PKDGNANGH 9
P+ GN GH
Sbjct: 1265 PEGGNPTGH 1273
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 PKDGNANGH 9
P+ GN GH
Sbjct: 1265 PEGGNPTGH 1273
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 2 KDGNANGH 9
KD A+GH
Sbjct: 609 KDNYASGH 616
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 1 PKDGNANGHP 10
P+DG HP
Sbjct: 23 PEDGWVKVHP 32
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 2 KDGNANG 8
K GN NG
Sbjct: 243 KSGNKNG 249
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 1 PKDGNANG 8
P GN+NG
Sbjct: 204 PCSGNSNG 211
95|SequenceR|480|471|KKVGHPKDGN
>sp|U18_HHV6U|PUTATIVE immediate early glycoprotein|Human herpesvirus 6A (strain
Query: 1 KKVGHPK 7
KKV HPK
Sbjct: 199 KKVAHPK 205
>sp|VE8E2_HPV28|PROTEIN E8^E2C|Human papillomavirus 28
Query: 3 VGHPKD 8
VGHP D
Sbjct: 86 VGHPSD 91
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 3 VGHPKD 8
VGHP D
Sbjct: 286 VGHPSD 291
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 1 KKVGHPKDGN 10
K GH DGN
Sbjct: 93 KSDGHLNDGN 102
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 1 KKVGHPKDGN 10
K GH DGN
Sbjct: 93 KSDGHLNDGN 102
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 2 KVGHPKDGN 10
+VG+P D N
Sbjct: 297 RVGNPTDEN 305
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 5 HPKDG 9
HPKDG
Sbjct: 407 HPKDG 411
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 4 GHPKD 8
GHP+D
Sbjct: 554 GHPED 558
>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 KKVGHPKDG 9
K V H KDG
Sbjct: 92 KGVSHLKDG 100
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 KKVGHPKDG 9
K V H KDG
Sbjct: 92 KGVSHLKDG 100
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KKVGHPKDG 9
K V H KDG
Sbjct: 92 KGVSHLKDG 100
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 1 KKVGHPKDG 9
K V H KDG
Sbjct: 92 KGVSHLKDG 100
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 4 GHPKD 8
GHP+D
Sbjct: 385 GHPED 389
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 4 GHPKD 8
GHP+D
Sbjct: 385 GHPED 389
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 4 GHPKD 8
GHP+D
Sbjct: 385 GHPED 389
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 4 GHPKD 8
GHP+D
Sbjct: 385 GHPED 389
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 VGHPKDGN 10
VGH K+G+
Sbjct: 2038 VGHVKNGS 2045
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 KVGHPKDGN 10
+VG P D N
Sbjct: 297 RVGDPADEN 305
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 KVGHPKDGN 10
+VG P D N
Sbjct: 297 RVGDPADEN 305
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 KVGHPKDGN 10
+VG P D N
Sbjct: 297 RVGDPADEN 305
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 5 HPKDG 9
HP+DG
Sbjct: 404 HPRDG 408
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 VGHPKDGN 10
+ HP +GN
Sbjct: 479 IAHPMNGN 486
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 5 HPKDG 9
HP+DG
Sbjct: 405 HPRDG 409
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 5 HPKDG 9
HP+DG
Sbjct: 405 HPRDG 409
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 5 HPKDG 9
HP+DG
Sbjct: 405 HPRDG 409
96|SequenceR|485|476|QKKSPKKVGH
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QKKSPKK 7
Q+K PKK
Sbjct: 306 QRKDPKK 312
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QKKSPKK 7
Q+K PKK
Sbjct: 306 QRKDPKK 312
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QKKSPKK 7
Q+K PKK
Sbjct: 306 QRKDPKK 312
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 QKKSPKKVGH 10
Q K P+ GH
Sbjct: 2004 QDKMPEVAGH 2013
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 QKKSPKKVGH 10
Q K P+ GH
Sbjct: 2004 QDKMPEVAGH 2013
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 QKKSPKKVGH 10
Q K P+ GH
Sbjct: 2004 QDKMPEVAGH 2013
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 QKKSPKKVGH 10
Q K P+ GH
Sbjct: 2004 QDKMPEVAGH 2013
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 QKKSPKKVGH 10
Q K P+ GH
Sbjct: 2004 QDKMPEVAGH 2013
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 QKKSPKKVGH 10
Q K P+ GH
Sbjct: 2004 QDKMPEVAGH 2013
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 1 QKKSPKKVG 9
Q +SP +VG
Sbjct: 470 QSRSPIRVG 478
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 QKKSPKKVGH 10
Q K P+ GH
Sbjct: 2006 QMKMPEVAGH 2015
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 KKSPKKVGH 10
+KSP GH
Sbjct: 457 EKSPAPTGH 465
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 KKSPKKVG 9
KK+ +KVG
Sbjct: 1625 KKTSRKVG 1632
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 3 KSPKKVG 9
K+P+KVG
Sbjct: 343 KAPEKVG 349
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 3 KSPKKVG 9
K PKK G
Sbjct: 87 KDPKKTG 93
97|SequenceR|490|481|AAPEQQKKSP
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 APEQQKKS 9
+P+QQKK+
Sbjct: 140 SPDQQKKT 147
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 APEQQKKS 9
+P+QQKK+
Sbjct: 140 SPDQQKKT 147
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 4 EQQKKSP 10
+QQKK P
Sbjct: 503 KQQKKEP 509
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 4 EQQKKSP 10
+QQKK P
Sbjct: 503 KQQKKEP 509
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PEQQKKSP 10
P+Q KK P
Sbjct: 499 PKQPKKEP 506
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PEQQKKSP 10
P+Q KK P
Sbjct: 499 PKQPKKEP 506
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 4 EQQKKSP 10
+QQKK P
Sbjct: 503 KQQKKEP 509
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 1 AAPEQQKKSP 10
A P+ QK+ P
Sbjct: 437 AVPDTQKEDP 446
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 1 AAPEQQKKSP 10
A P+ QK+ P
Sbjct: 437 AVPDTQKEDP 446
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 1 AAPEQQKKSP 10
A E+QKK+P
Sbjct: 1179 AIDEEQKKAP 1188
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 AAPEQQKKSP 10
A E+QKK+P
Sbjct: 1165 AIDEEQKKAP 1174
98|SequenceR|495|486|EPPPPAAPEQ
>sp|US20_HCMVT|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PPPPAAP 8
PP PAAP
Sbjct: 27 PPSPAAP 33
>sp|US20_HCMVA|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPPPAAP 8
PP PAAP
Sbjct: 27 PPSPAAP 33
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PPPPAAP 8
P PPAAP
Sbjct: 440 PVPPAAP 446
Query: 1 EPPPPAAPEQ 10
+P PPA Q
Sbjct: 27 QPAPPATTVQ 36
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PPPPAAP 8
P PPAAP
Sbjct: 440 PVPPAAP 446
Query: 1 EPPPPAAPEQ 10
+P PPA Q
Sbjct: 27 QPAPPATTVQ 36
>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P
Query: 2 PPPPAAP 8
PPP A P
Sbjct: 271 PPPEACP 277
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 EPPPPAAPEQ 10
EPPPP AP Q
Sbjct: 765 EPPPPQAPYQ 774
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PPPPAAP 8
PPPP +P
Sbjct: 97 PPPPYSP 103
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PPPPAAP 8
PPPP +P
Sbjct: 97 PPPPYSP 103
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 2 PPPPAAPEQ 10
PPPP+A Q
Sbjct: 418 PPPPSASLQ 426
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 2 PPPPAAPEQ 10
PPPP+A Q
Sbjct: 512 PPPPSASLQ 520
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 EPPPPA 6
+PPPPA
Sbjct: 1419 KPPPPA 1424
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 PPPPA 6
PPPPA
Sbjct: 1417 PPPPA 1421
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 PPPPA 6
PPPPA
Sbjct: 1454 PPPPA 1458
Query: 1 EPPPPAA 7
E PPP A
Sbjct: 1452 ETPPPPA 1458
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 PPPPA 6
PPPPA
Sbjct: 1464 PPPPA 1468
Query: 1 EPPPPAA 7
E PPP A
Sbjct: 1462 ETPPPPA 1468
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 PPPPA 6
PPPPA
Sbjct: 1424 PPPPA 1428
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 PPPPA 6
PPPPA
Sbjct: 1444 PPPPA 1448
Query: 1 EPPPPAA 7
E PPP A
Sbjct: 1442 ETPPPPA 1448
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 PPPPA 6
PPPPA
Sbjct: 1445 PPPPA 1449
Query: 1 EPPPPAA 7
E PPP A
Sbjct: 1443 ETPPPPA 1449
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PPPPAAP 8
P PP AP
Sbjct: 440 PVPPTAP 446
Query: 1 EPPPPAAPEQ 10
+P PPA Q
Sbjct: 27 QPAPPATTVQ 36
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 PPPPA 6
PPPP
Sbjct: 2865 PPPPG 2869
Query: 2 PPPP 5
PPPP
Sbjct: 2864 PPPP 2867
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 PPPPA 6
PPPPA
Sbjct: 1456 PPPPA 1460
Query: 1 EPPPPAA 7
E PPP A
Sbjct: 1454 ETPPPPA 1460
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 PPPPA 6
PPPPA
Sbjct: 1448 PPPPA 1452
Query: 1 EPPPPAA 7
E PPP A
Sbjct: 1446 ETPPPPA 1452
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PPPPAAP 8
PPPP +P
Sbjct: 97 PPPPYSP 103
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 PPPPA 6
PPPPA
Sbjct: 1445 PPPPA 1449
Query: 1 EPPPPAA 7
E PPP A
Sbjct: 1443 ETPPPPA 1449
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 PPPPA 6
PPPPA
Sbjct: 1455 PPPPA 1459
Query: 1 EPPPPAA 7
E PPP A
Sbjct: 1453 ETPPPPA 1459
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 PPPPA 6
PPPPA
Sbjct: 1443 PPPPA 1447
Query: 1 EPPPPAA 7
E PPP A
Sbjct: 1441 ETPPPPA 1447
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 PPPPA 6
PPPPA
Sbjct: 1454 PPPPA 1458
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PPPP 5
PPPP
Sbjct: 14 PPPP 17
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPPP 5
PPPP
Sbjct: 14 PPPP 17
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 PPPPA 6
PPPPA
Sbjct: 1446 PPPPA 1450
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 PPPPA 6
PPPPA
Sbjct: 1446 PPPPA 1450
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 PPPPA 6
PPPPA
Sbjct: 1431 PPPPA 1435
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 PPPPA 6
PPPPA
Sbjct: 1457 PPPPA 1461
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 PPPPAAPE 9
P PPA E
Sbjct: 2873 PEPPAGAE 2880
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 2 PPPPAAPEQ 10
PPPP+A Q
Sbjct: 417 PPPPSASLQ 425
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 PPPPAAPE 9
P PP+A E
Sbjct: 1696 PDPPSALE 1703
>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21
Query: 1 EPPPPA 6
EPP PA
Sbjct: 30 EPPLPA 35
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 PPPPAAPE 9
P PP+A E
Sbjct: 1696 PDPPSALE 1703
>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19
Query: 1 EPPPPA 6
EPP PA
Sbjct: 25 EPPLPA 30
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPPPAAPE 9
P PP+A E
Sbjct: 1707 PEPPSALE 1714
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPPPAAPE 9
P PP+A E
Sbjct: 1707 PEPPSALE 1714
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPPPAAPE 9
P PP+A E
Sbjct: 1707 PEPPSALE 1714
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PPPPAAPE 9
P PP+A E
Sbjct: 1707 PEPPSALE 1714
>sp|VE6_HPV14|PROTEIN E6|Human papillomavirus 14
Query: 1 EPPPPA 6
EPP PA
Sbjct: 33 EPPLPA 38
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPPPAAPE 9
P PP+A E
Sbjct: 1707 PEPPSALE 1714
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EPPPPAAPE 9
+PPPP E
Sbjct: 352 DPPPPRVEE 360
Query: 2 PPPPAAPE 9
PPPP A +
Sbjct: 53 PPPPDAED 60
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EPPPPAAPE 9
+PPPP E
Sbjct: 352 DPPPPRVEE 360
Query: 2 PPPPAAPE 9
PPPP A +
Sbjct: 53 PPPPDAED 60
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PPPPAAPE 9
P PP+A E
Sbjct: 1707 PEPPSALE 1714
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PPPPAAPEQ 10
PP P P Q
Sbjct: 763 PPRPMEPAQ 771
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PPPPAAPEQ 10
PP P P Q
Sbjct: 763 PPRPMEPAQ 771
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPPPAAPE 9
P PP+A E
Sbjct: 1707 PEPPSALE 1714
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PPPPA 6
PPPP+
Sbjct: 110 PPPPS 114
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPPPA 6
PPPP+
Sbjct: 110 PPPPS 114
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 4 PPAAPE 9
PPA+P+
Sbjct: 212 PPASPD 217
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 1 EPPPPAAPEQ 10
EP P AP+Q
Sbjct: 174 EPCPSPAPQQ 183
Query: 2 PPPPAAPE 9
PPPP+ E
Sbjct: 419 PPPPSGIE 426
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 3 PPPAAPE 9
PPPAA +
Sbjct: 629 PPPAASQ 635
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 PPPPAAPE 9
PP P PE
Sbjct: 2379 PPDPTTPE 2386
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 2 PPPPA 6
PPPP+
Sbjct: 626 PPPPS 630
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 PPPP 5
PPPP
Sbjct: 1462 PPPP 1465
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 2 PPPP 5
PPPP
Sbjct: 123 PPPP 126
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 PPPP 5
PPPP
Sbjct: 1446 PPPP 1449
99|SequenceR|500|491|LLDVDEPPPP
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 LDVDEPPPP 10
+ +D+PPPP
Sbjct: 1415 ISMDKPPPP 1423
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 LDVDEPPPP 10
+ +D PPPP
Sbjct: 1419 ISLDAPPPP 1427
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 5 DEPPPP 10
D PPPP
Sbjct: 1444 DTPPPP 1449
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 3 DVDEPPP 9
D+DEP P
Sbjct: 9 DMDEPSP 15
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LLDVDEPPP 9
LL V+EP P
Sbjct: 402 LLHVEEPDP 410
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 3 DVDEPP 8
D DEPP
Sbjct: 74 DYDEPP 79
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 5 DEPPPP 10
D PPPP
Sbjct: 217 DAPPPP 222
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 DVDEPPPP 10
+ DEPP P
Sbjct: 311 NFDEPPLP 318
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 1 LLDVDEPPP 9
LL V+EP P
Sbjct: 413 LLPVEEPDP 421
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 5 DEPPP 9
DEPPP
Sbjct: 336 DEPPP 340
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 5 DEPPP 9
DEPPP
Sbjct: 336 DEPPP 340
>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 DEPPPP 10
D PPPP
Sbjct: 355 DSPPPP 360
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 LLDVDEPPP 9
L++VD+P P
Sbjct: 440 LVNVDKPIP 448
>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 DEPPPP 10
D PPPP
Sbjct: 355 DSPPPP 360
>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25
Query: 2 LDVDEPPPP 10
++DEP PP
Sbjct: 235 FEIDEPTPP 243
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 2 LDVDEPPPP 10
++DEP PP
Sbjct: 236 FEIDEPTPP 244
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 2 LDVDEP 7
LD+DEP
Sbjct: 107 LDIDEP 112
>sp|VL2_HPV22|MINOR capsid protein L2|Human papillomavirus 22
Query: 2 LDVDEPPPP 10
D++EP PP
Sbjct: 234 FDIEEPTPP 242
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 2 LDVDEP 7
LD+DEP
Sbjct: 107 LDIDEP 112
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 3 DVDEPPPP 10
DVD PPP
Sbjct: 114 DVDASPPP 121
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 LLDVDEPPPP 10
L ++D PPP
Sbjct: 1341 LEEIDIMPPP 1350
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 3 DVDEPPPP 10
DVD PPP
Sbjct: 114 DVDASPPP 121
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 LDVDEPPPP 10
+DV PPP
Sbjct: 1463 IDVKTVPPP 1471
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 3 DVDEPPPP 10
DVD PPP
Sbjct: 114 DVDASPPP 121
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 3 DVDEPPPP 10
DVD PPP
Sbjct: 114 DVDASPPP 121
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 3 DVDEPPPP 10
DVD PPP
Sbjct: 114 DVDASPPP 121
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 LDVDEPPPP 10
+D+ PPP
Sbjct: 1466 IDIKTSPPP 1474
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 LDVDEPPPP 10
+D+ PPP
Sbjct: 1466 IDIKTSPPP 1474
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 LDVDEPPPP 10
+D+ PPP
Sbjct: 1464 IDIKTTPPP 1472
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 LDVDEPPPP 10
+D+ PPP
Sbjct: 1464 IDIKTTPPP 1472
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 LDVDEPPPP 10
+D+ PPP
Sbjct: 1463 IDIKTTPPP 1471
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 2 LDVDEP 7
LD+DEP
Sbjct: 107 LDIDEP 112
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 LLDVDEPPPP 10
++D+ E P P
Sbjct: 1470 MIDIKETPAP 1479
>sp|PG137_VARV|PROTEIN OPG137|Variola virus
Query: 4 VDEPPPP 10
+D+ PPP
Sbjct: 90 IDDTPPP 96
>sp|PG137_VAR67|PROTEIN OPG137|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 VDEPPPP 10
+D+ PPP
Sbjct: 90 IDDTPPP 96
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 3 DVDEPPPP 10
DVD PP
Sbjct: 770 DVDRRAPP 777
>sp|PG137_VACCC|PROTEIN OPG137|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 VDEPPPP 10
+D+ PPP
Sbjct: 89 IDDTPPP 95
>sp|PG137_VACCA|PROTEIN OPG137|Vaccinia virus (strain Ankara) (VACV)
Query: 4 VDEPPPP 10
+D+ PPP
Sbjct: 89 IDDTPPP 95
>sp|PG137_MONPV|PROTEIN OPG137|Monkeypox virus (MPXV)
Query: 4 VDEPPPP 10
+D+ PPP
Sbjct: 89 IDDTPPP 95
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 LLDVDEPPPP 10
++DV P PP
Sbjct: 41 VVDVRGPQPP 50
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 LLDVDEPPPP 10
++DV P PP
Sbjct: 41 VVDVRGPQPP 50
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 LDVDEPPPP 10
+D+ PPP
Sbjct: 1463 IDIKTRPPP 1471
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LLDVDEP 7
L+DVD P
Sbjct: 1185 LIDVDVP 1191
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LLDVDEP 7
L+DVD P
Sbjct: 1185 LIDVDVP 1191
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 5 DEPPP 9
+EPPP
Sbjct: 499 EEPPP 503
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 1 LLDVDEP 7
++++DEP
Sbjct: 306 IIEIDEP 312
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 1 LLDVDEP 7
++++DEP
Sbjct: 306 IIEIDEP 312
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 1 LLDVDEP 7
++++DEP
Sbjct: 306 IIEIDEP 312
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 LLDVDEPPPP 10
+ + EPPPP
Sbjct: 1 MQEATEPPPP 10
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 1 LLDVDEP 7
++++DEP
Sbjct: 306 IIEIDEP 312
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 1 LLDVDEP 7
++++DEP
Sbjct: 306 IIEIDEP 312
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 LDVDEPPPP 10
+DV PPP
Sbjct: 1438 IDVCNTPPP 1446
100|SequenceR|505|496|SGELGLLDVD
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 GELGLLDVD 10
GE+G LD+D
Sbjct: 1613 GEIGALDLD 1621
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 SGELGLLDV 9
SG +GLLDV
Sbjct: 26 SGVIGLLDV 34
>sp|PG079_VACCC|PROTEIN OPG079|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LGLLDVD 10
LGL+D+D
Sbjct: 247 LGLVDID 253
>sp|CORE5_ADE40|CORE-CAPSID bridging protein|Human adenovirus F serotype 40
Query: 2 GELGLL 7
GELGLL
Sbjct: 131 GELGLL 136
>sp|PG079_MONPV|PROTEIN OPG079|Monkeypox virus (MPXV)
Query: 4 LGLLDVD 10
LGL+D+D
Sbjct: 247 LGLVDID 253
>sp|PG079_VARV|PROTEIN OPG079|Variola virus
Query: 4 LGLLDVD 10
LGL+D+D
Sbjct: 247 LGLVDID 253
>sp|PG079_VAR67|PROTEIN OPG079|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 LGLLDVD 10
LGL+D+D
Sbjct: 247 LGLVDID 253
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 SGELGLLD 8
SGE LLD
Sbjct: 1421 SGEFKLLD 1428
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LGLLDV 9
LGLLDV
Sbjct: 220 LGLLDV 225
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LGLLDV 9
LGLLDV
Sbjct: 220 LGLLDV 225
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 4 LGLLDVD 10
LGL+D D
Sbjct: 535 LGLIDTD 541
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 4 LGLLDVD 10
LGL+D D
Sbjct: 535 LGLIDAD 541
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 2 GELGLLDVD 10
GE+GL D +
Sbjct: 355 GEIGLHDFE 363
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 SGELGLL 7
SG+LGL+
Sbjct: 476 SGKLGLI 482
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 SGELGLL 7
SG+LGL+
Sbjct: 476 SGKLGLI 482
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 SGELGLL 7
SG+LGL+
Sbjct: 476 SGKLGLI 482
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 1 SGELGLL 7
SG+LGL+
Sbjct: 476 SGKLGLI 482
>sp|PG112_VACCC|LATE protein OPG112|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GELGLLDV 9
GEL LD+
Sbjct: 17 GELNTLDI 24
>sp|PG112_VACCA|LATE protein OPG112|Vaccinia virus (strain Ankara) (VACV)
Query: 2 GELGLLDV 9
GEL LD+
Sbjct: 17 GELNTLDI 24
>sp|PG112_MONPV|LATE protein OPG112|Monkeypox virus (MPXV)
Query: 2 GELGLLDV 9
GEL LD+
Sbjct: 17 GELNTLDI 24
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 1 SGELGLLDVD 10
+G+L L D+D
Sbjct: 480 AGDLVLFDLD 489
>sp|H7_VACCT|LATE protein H7|Vaccinia virus (strain Tian Tan)
Query: 2 GELGLLDV 9
GEL LD+
Sbjct: 17 GELNTLDI 24
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 1 SGELGLLDVD 10
+G+L L D+D
Sbjct: 480 AGDLVLFDLD 489
101|SequenceR|510|501|SNSMASGELG
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 SNSMASGE 8
++SMASG+
Sbjct: 1424 TDSMASGQ 1431
102|SequenceR|515|506|APPSFSNSMA
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 APPSFSNSMA 10
+PPS +NS A
Sbjct: 2195 SPPSLANSSA 2204
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 1 APPSFSNS 8
+PP+ SNS
Sbjct: 162 SPPTVSNS 169
>sp|MATRX_ISFV|MATRIX protein|Isfahan virus (ISFV)
Query: 2 PPSFSNS 8
PPS+S+S
Sbjct: 28 PPSYSDS 34
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 PPSFSNS 8
PP+++NS
Sbjct: 25 PPAYTNS 31
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 2 PPSFSNS 8
PP+ SNS
Sbjct: 165 PPTVSNS 171
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 2 PPSFSNS 8
PP+ SNS
Sbjct: 165 PPTVSNS 171
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 2 PPSFSNS 8
PP+ SNS
Sbjct: 163 PPTVSNS 169
103|SequenceR|520|511|NTPPAAPPSF
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 NTPPAAPPS 9
NTP APP+
Sbjct: 600 NTPTVAPPA 608
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPS 9
PAAPPS
Sbjct: 124 PAAPPS 129
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 NTPPAAPPS 9
N P A PP+
Sbjct: 1903 NIPAAIPPA 1911
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 3 PPAAPP 8
PP APP
Sbjct: 66 PPTAPP 71
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 NTPPAAPPS 9
N P A PP+
Sbjct: 1903 NLPAAIPPA 1911
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 NTPPAAPPS 9
N P A PP+
Sbjct: 1903 NLPAAIPPA 1911
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 NTPPAAPPSF 10
+TPPA P S+
Sbjct: 1218 STPPAVPQSY 1227
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 NTPPAAPPSF 10
+TPPA P +F
Sbjct: 1219 STPPAVPQTF 1228
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 NTPPAAPPSF 10
+TPPA P S+
Sbjct: 1222 STPPAVPESY 1231
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 2 TPPAAPPSF 10
+PP PP F
Sbjct: 385 SPPPLPPFF 393
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 NTPPAAPPSF 10
+TPPA P S+
Sbjct: 1220 STPPAVPQSY 1229
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 NTPPAAPPSF 10
+TPPA P S+
Sbjct: 1220 STPPAVPQSY 1229
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TPPAAPPSF 10
+PP PP +
Sbjct: 235 SPPKLPPRW 243
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TPPAAPPSF 10
+PP PP +
Sbjct: 235 SPPKLPPRW 243
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NTPPAAPPSF 10
++PPA P SF
Sbjct: 1214 SSPPAVPQSF 1223
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 NTPPAAPPSF 10
++PPA P SF
Sbjct: 1214 SSPPAVPQSF 1223
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 1 NTPPAAPP 8
+TPP +PP
Sbjct: 201 STPPGSPP 208
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NTPPAAPPSF 10
++PPA P SF
Sbjct: 1214 SSPPAVPQSF 1223
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPS 9
PAAPPS
Sbjct: 124 PAAPPS 129
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 TPPAAPPS 9
TP APPS
Sbjct: 577 TPTMAPPS 584
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PPAAP 7
PPAAP
Sbjct: 442 PPAAP 446
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PPAAP 7
PPAAP
Sbjct: 442 PPAAP 446
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 NTPPAAPPS 9
NT PA PP+
Sbjct: 108 NTAPAQPPT 116
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 NTPPAAPP 8
NT P APP
Sbjct: 1728 NTAPVAPP 1735
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 NTPPAAPPSF 10
+TPPA P F
Sbjct: 1215 STPPAVPHEF 1224
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 NTPPAAPPSF 10
+TPPA P F
Sbjct: 1215 STPPAVPHEF 1224
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 NTPPAAPPSF 10
+TPPA P ++
Sbjct: 1219 STPPAVPQTY 1228
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 NTPPAAPPSF 10
+TPPA P ++
Sbjct: 1218 STPPAVPQTY 1227
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 NTPPAAPPSF 10
+TPPA P ++
Sbjct: 1218 STPPAVPQTY 1227
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 NTPPAAPPSF 10
+TPPA P ++
Sbjct: 1218 STPPAVPQTY 1227
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 NTPPAAPPSF 10
+TPPA P ++
Sbjct: 1218 STPPAVPQTY 1227
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 NTPPAAPPSF 10
+TPPA P ++
Sbjct: 1214 STPPAVPQTY 1223
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 NTPPAAPPSF 10
+TPPA P ++
Sbjct: 1212 STPPAVPQTY 1221
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 NTPPAAPPSF 10
+TPPA P ++
Sbjct: 1218 STPPAVPQTY 1227
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPS 9
P APPS
Sbjct: 124 PTAPPS 129
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPS 9
P APPS
Sbjct: 124 PTAPPS 129
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPS 9
P APPS
Sbjct: 121 PTAPPS 126
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 TPPAA 6
TPPAA
Sbjct: 475 TPPAA 479
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPS 9
P APPS
Sbjct: 124 PTAPPS 129
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPS 9
P APPS
Sbjct: 121 PTAPPS 126
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPS 9
P APPS
Sbjct: 124 PTAPPS 129
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 1 NTPPAAPPS 9
N P APP+
Sbjct: 600 NNPTVAPPA 608
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPS 9
P APPS
Sbjct: 124 PTAPPS 129
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 NTPPAAPPSF 10
+TPPA P ++
Sbjct: 1218 STPPAVPQAY 1227
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NTPPAAPPSF 10
++PPA P +F
Sbjct: 1214 SSPPAVPQTF 1223
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NTPPAAPPSF 10
++PPA P +F
Sbjct: 1214 SSPPAVPQTF 1223
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 2 TPPAAPPS 9
T PA+PP+
Sbjct: 666 TAPASPPN 673
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NTPPAAPPSF 10
++PPA P +F
Sbjct: 1214 SSPPAVPQTF 1223
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 NTPPAAPPSF 10
TPPA P ++
Sbjct: 1216 TTPPAVPQTY 1225
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NTPPAAPPSF 10
++PPA P +F
Sbjct: 1214 SSPPAVPQTF 1223
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NTPPAAPPSF 10
++PPA P +F
Sbjct: 1214 SSPPAVPQTF 1223
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPS 9
P APPS
Sbjct: 124 PTAPPS 129
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 3 PPAAPP 8
PP PP
Sbjct: 465 PPLTPP 470
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPAAPP 8
PP PP
Sbjct: 465 PPLTPP 470
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPS 9
P APPS
Sbjct: 124 PTAPPS 129
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPAAPPS 9
PP APPS
Sbjct: 67 PPGAPPS 73
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 NTPPAA 6
+TPPAA
Sbjct: 661 STPPAA 666
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 4 PAAPPSF 10
PAAPP +
Sbjct: 30 PAAPPLY 36
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 4 PAAPPSF 10
PAAPP +
Sbjct: 30 PAAPPLY 36
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPAAPPS 9
PP APPS
Sbjct: 67 PPGAPPS 73
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NTPPAAPPSF 10
++PPA P +F
Sbjct: 1214 SSPPAVPQAF 1223
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 1 NTPPAAPPSF 10
N PP A PS
Sbjct: 960 NAPPVASPSI 969
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 NTPPAA 6
+TPPAA
Sbjct: 661 STPPAA 666
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NTPPAAPPSF 10
N PP A PS
Sbjct: 961 NAPPVASPSI 970
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 TPPAAPPS 9
TP APP+
Sbjct: 601 TPTVAPPA 608
>sp|VE8E2_HPV08|PROTEIN E8^E2C|Human papillomavirus type 8
Query: 1 NTPPAAPP 8
+TPP +PP
Sbjct: 10 STPPGSPP 17
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 TPPAAPPS 9
TP APP+
Sbjct: 601 TPTVAPPA 608
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 TPPAAPPS 9
TP APP+
Sbjct: 601 TPTVAPPA 608
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 4 PAAPPSF 10
P A PSF
Sbjct: 475 PCAKPSF 481
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 NTPPAAPPSF 10
+T P PPSF
Sbjct: 96 HTTPNIPPSF 105
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 1 NTPPAAPPS 9
T PA PPS
Sbjct: 14 TTSPAGPPS 22
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPAAPPS 9
PP APPS
Sbjct: 67 PPGAPPS 73
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 NTPPAAPPSF 10
+T P PPSF
Sbjct: 96 HTTPNIPPSF 105
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 TPPAAPPS 9
T P APP+
Sbjct: 454 TEPTAPPA 461
104|SequenceR|525|516|SLLESNTPPA
>sp|MATRX_HMPVC|MATRIX protein|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 LLESNTPPA 10
L ++NTPPA
Sbjct: 38 LFQANTPPA 46
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 3 LESNTPP 9
L++NTPP
Sbjct: 581 LQTNTPP 587
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 3 LESNTPP 9
L++NTPP
Sbjct: 581 LQTNTPP 587
>sp|REV_HV1RH|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 1 SLLESNTPPA 10
SL +SN PP+
Sbjct: 21 SLYQSNPPPS 30
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 LLESNTPPA 10
LLES PPA
Sbjct: 539 LLESLRPPA 547
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 LLESNTPP 9
LLE NT P
Sbjct: 2546 LLEDNTTP 2553
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 LLESNTPP 9
LLE NT P
Sbjct: 2546 LLEDNTTP 2553
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 LLESNTPP 9
LLE NT P
Sbjct: 2554 LLEDNTTP 2561
Query: 2 LLESNTPP 9
LLES PP
Sbjct: 539 LLESARPP 546
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SLLESNTP 8
SLL+++TP
Sbjct: 1365 SLLKNDTP 1372
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 LESNTPP 9
++NTPP
Sbjct: 1743 FQNNTPP 1749
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 LESNTPP 9
++NTPP
Sbjct: 1743 FQNNTPP 1749
105|SequenceR|530|521|GGFLDSLLES
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 GGFLDSLL 8
GGFL SLL
Sbjct: 72 GGFLVSLL 79
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 1 GGFLDSLL 8
GGFL SLL
Sbjct: 72 GGFLVSLL 79
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 GGFLDSLL 8
GGFL SLL
Sbjct: 72 GGFLVSLL 79
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 1 GGFLDSLL 8
G+LD+LL
Sbjct: 512 AGYLDALL 519
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 GFLDSLLE 9
GF+DS+ E
Sbjct: 1008 GFVDSVKE 1015
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 GFLDSLLE 9
GF+DS+ E
Sbjct: 1015 GFVDSVKE 1022
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 GFLDSLLE 9
GF+DS+ E
Sbjct: 1015 GFVDSVKE 1022
106|SequenceR|535|526|GAAGGGGFLD
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 GAAGGGGFL 9
GAAGG G L
Sbjct: 846 GAAGGSGVL 854
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 GAAGGG 6
GAAGGG
Sbjct: 1136 GAAGGG 1141
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 AGGGGFL 9
AGGGG++
Sbjct: 980 AGGGGYV 986
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 GAAGGGGFLD 10
G A G GF+D
Sbjct: 1005 GEAFGSGFVD 1014
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 GAAGGGGFLD 10
G A G GF+D
Sbjct: 1002 GEAFGNGFVD 1011
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 GAAGGGGFLD 10
G A G GF+D
Sbjct: 1009 GEAFGNGFVD 1018
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 GAAGGGGFLD 10
G A G GF+D
Sbjct: 1009 GEAFGNGFVD 1018
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GAAGGGG 7
GAAGGG
Sbjct: 410 GAAGGGA 416
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 4 GGGGF 8
GGGGF
Sbjct: 106 GGGGF 110
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GAAGGGGFL 9
GA+ GG FL
Sbjct: 806 GASLGGAFL 814
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GAAGGGGFL 9
GA+ GG FL
Sbjct: 806 GASLGGAFL 814
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 AAGGGGF 8
AAG GGF
Sbjct: 444 AAGYGGF 450
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 AAGGGGF 8
AAG GGF
Sbjct: 444 AAGYGGF 450
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 AAGGGG 7
A+GGGG
Sbjct: 1190 ASGGGG 1195
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 AAGGGG 7
A+GGGG
Sbjct: 1191 ASGGGG 1196
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 GAAGGGGFLD 10
GAA G GF +
Sbjct: 1045 GAAFGSGFTN 1054
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 GAAGGGGF 8
GAA G GF
Sbjct: 1037 GAAFGSGF 1044
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 GAAGGGGF 8
GAA G GF
Sbjct: 1037 GAAFGSGF 1044
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 GAAGGGGF 8
GAA G GF
Sbjct: 1038 GAAFGSGF 1045
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 GAAGGGGF 8
GAA G GF
Sbjct: 1038 GAAFGSGF 1045
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 GAAGGGGF 8
GAA G GF
Sbjct: 1040 GAAFGSGF 1047
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 GAAGGGGF 8
GAA G GF
Sbjct: 1040 GAAFGSGF 1047
>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65
Query: 1 GAAGGGGF 8
G GGGG
Sbjct: 128 GEVGGGGL 135
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 AGGGGF 8
AGG GF
Sbjct: 1284 AGGAGF 1289
>sp|3BHS_VACCC|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 4 GGGGFL 9
GG GFL
Sbjct: 8 GGAGFL 13
>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 4 GGGGFL 9
GG GFL
Sbjct: 8 GGAGFL 13
>sp|3BHS_MONPV|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Monkeypox
Query: 4 GGGGFL 9
GG GFL
Sbjct: 8 GGAGFL 13
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 GAAGGGGF 8
G G GGF
Sbjct: 278 GCMGSGGF 285
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GAAGGGG 7
GAAGGG
Sbjct: 410 GAAGGGA 416
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 AGGGG 7
AGGGG
Sbjct: 1632 AGGGG 1636
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GAAGGGGFLD 10
G+ GGF D
Sbjct: 256 GSYRAGGFFD 265
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GAAGGGGFLD 10
G+ GGF D
Sbjct: 256 GSYRAGGFFD 265
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 5 GGGFLD 10
GG FLD
Sbjct: 422 GGDFLD 427
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 5 GGGFLD 10
GG FLD
Sbjct: 422 GGDFLD 427
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 AAGGGGFLD 10
A GG F+D
Sbjct: 3092 APGGKAFMD 3100
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 AAGGGGFLD 10
A GG F+D
Sbjct: 3092 APGGKAFMD 3100
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 AAGGGGFLD 10
A GG F+D
Sbjct: 3092 APGGKAFMD 3100
>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P
Query: 1 GAAGGGGF 8
A GG GF
Sbjct: 196 AAQGGAGF 203
107|SequenceR|540|531|GAQTPGAAGG
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 3 QTPGAAG 9
QTPGAAG
Sbjct: 34 QTPGAAG 40
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 3 QTPGAAG 9
QTPGAAG
Sbjct: 34 QTPGAAG 40
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 3 QTPGAAG 9
QTPGAAG
Sbjct: 34 QTPGAAG 40
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 GAQTPGAAGG 10
G QTP GG
Sbjct: 730 GGQTPQGRGG 739
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 1 GAQTPGAAGG 10
G+Q PG + G
Sbjct: 87 GSQGPGKSDG 96
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 1 GAQTPGAAGG 10
G+Q PG + G
Sbjct: 87 GSQGPGKSDG 96
>sp|DUT_MONPV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Monkeypox virus (MPXV)
Query: 3 QTPGAAG 9
Q+PGAAG
Sbjct: 29 QSPGAAG 35
>sp|DUT_VACCP|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain L-IVP)
Query: 3 QTPGAAG 9
Q+PGAAG
Sbjct: 25 QSPGAAG 31
>sp|DUT_VACCC|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 3 QTPGAAG 9
Q+PGAAG
Sbjct: 25 QSPGAAG 31
>sp|DUT_VACCA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 3 QTPGAAG 9
Q+PGAAG
Sbjct: 25 QSPGAAG 31
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 1 GAQTPGAA 8
G +TPG+A
Sbjct: 282 GRETPGSA 289
>sp|NP04_HHV11|NUCLEAR protein UL4|Human herpesvirus 1 (strain 17)
Query: 3 QTPGAAGG 10
+TPGAA G
Sbjct: 144 ETPGAAHG 151
>sp|DUT_CWPXG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Cowpox virus (strain GRI-90 /
Query: 3 QTPGAAG 9
Q+PGAAG
Sbjct: 25 QSPGAAG 31
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 5 PGAAG 9
PGAAG
Sbjct: 348 PGAAG 352
>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23
Query: 1 GAQTPGAAGG 10
G TP AGG
Sbjct: 146 GIDTPIVAGG 155
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 5 PGAAG 9
PGAAG
Sbjct: 348 PGAAG 352
>sp|VE4_HPV57|PROTEIN E4|Human papillomavirus 57
Query: 2 AQTPGAA 8
AQTPG A
Sbjct: 91 AQTPGGA 97
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 GAQTPGAAGG 10
G +PG GG
Sbjct: 983 GFASPGDCGG 992
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 GAQTPGAAGG 10
G +PG GG
Sbjct: 983 GFASPGDCGG 992
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 GAQTPGAAGG 10
G +PG GG
Sbjct: 980 GFASPGDCGG 989
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 2 AQTPGAAGG 10
A PG AGG
Sbjct: 574 AHPPGEAGG 582
108|SequenceR|545|536|EVGSQGAQTP
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 1 EVGSQGAQ 8
E G+QG Q
Sbjct: 159 ETGNQGVQ 166
109|SequenceR|550|541|PHFVDEVGSQ
>sp|PHOSP_LBV|PHOSPHOPROTEIN bat virus (LBV)
Query: 2 HFVDEVGSQ 10
+F+DE+G+Q
Sbjct: 95 NFLDELGTQ 103
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 HFVDEVG 8
HF+D++G
Sbjct: 1496 HFIDDIG 1502
>sp|PAX_I73A4|PROTEIN PA-X|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 HFVDEVG 8
HF++E+G
Sbjct: 52 HFINELG 58
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 HFVDEVG 8
HF++E+G
Sbjct: 52 HFINELG 58
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 1 PHFVDEV 7
PH ++EV
Sbjct: 12 PHVIEEV 18
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 1 PHFVDEV 7
PH ++EV
Sbjct: 12 PHVIEEV 18
>sp|UL78_HCMVM|PROTEIN UL78|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 FVDEVG 8
FVD+VG
Sbjct: 114 FVDDVG 119
>sp|UL78_HCMVA|UNCHARACTERIZED protein UL78|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 FVDEVG 8
FVD+VG
Sbjct: 114 FVDDVG 119
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 HFVDEVG 8
H++D++G
Sbjct: 1435 HYIDDIG 1441
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 HFVDEVG 8
H++D++G
Sbjct: 1432 HYIDDIG 1438
>sp|UL142_HCMVM|MEMBRANE glycoprotein UL142|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HFVDEVGSQ 10
+FV VGS+
Sbjct: 12 YFVSSVGSE 20
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PHFVDEVGS 9
P F++ VG+
Sbjct: 760 PQFIERVGN 768
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PHFVDEVGS 9
P F++ VG+
Sbjct: 760 PQFIERVGN 768
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PHFVDEVGS 9
P F++ VG+
Sbjct: 760 PQFIERVGN 768
>sp|VL2_HPV04|MINOR capsid protein L2|Human papillomavirus 4
Query: 3 FVDEVGS 9
+VD+VGS
Sbjct: 460 YVDDVGS 466
>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65
Query: 3 FVDEVGS 9
+VD+VGS
Sbjct: 457 YVDDVGS 463
110|SequenceR|555|546|SAPGSPHFVD
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 SAPGSPHFV 9
SAPGSP F+
Sbjct: 153 SAPGSPQFM 161
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 SAPGSPHFV 9
SAPGSP F+
Sbjct: 153 SAPGSPQFM 161
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 1 SAPGSPHFV 9
SAPGSP F+
Sbjct: 153 SAPGSPQFM 161
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 1 SAPGSPH 7
SAPG PH
Sbjct: 671 SAPGDPH 677
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 SAPGSPHFV 9
SAPGSP F+
Sbjct: 153 SAPGSPQFM 161
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 1 SAPGSPHFV 9
SAPGSP F+
Sbjct: 153 SAPGSPQFM 161
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 SAPGSPHFV 9
SAPGSP F+
Sbjct: 153 SAPGSPQFM 161
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 SAPGSPHFV 9
+APGSP F+
Sbjct: 160 AAPGSPQFM 168
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 SAPGSPHFV 9
+APGSP F+
Sbjct: 160 AAPGSPQFM 168
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 SAPGSPHFV 9
+APGSP F+
Sbjct: 160 AAPGSPQFM 168
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 SAPGSPH 7
SAPG PH
Sbjct: 671 SAPGDPH 677
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 SAPGSPHFV 9
+APGSP F+
Sbjct: 160 AAPGSPQFM 168
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 SAPGSPH 7
SAPG PH
Sbjct: 671 SAPGDPH 677
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 SAPGSPH 7
SAPG PH
Sbjct: 662 SAPGDPH 668
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 SAPGSPHFV 9
+APGSP F+
Sbjct: 160 AAPGSPQFM 168
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 SAPGSPHFV 9
+APGSP F+
Sbjct: 160 AAPGSPQFM 168
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 SAPGSPHFV 9
+APGSP F+
Sbjct: 160 AAPGSPQFM 168
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 6 PHFVD 10
PHF+D
Sbjct: 217 PHFID 221
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 6 PHFVD 10
PHF+D
Sbjct: 217 PHFID 221
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 SAPGSPH 7
+APG+PH
Sbjct: 676 TAPGNPH 682
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 SAPGSPH 7
+APG+PH
Sbjct: 677 TAPGNPH 683
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 SAPGSPH 7
+APG+PH
Sbjct: 677 TAPGNPH 683
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 SAPGSPH 7
+APG+PH
Sbjct: 677 TAPGNPH 683
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 SAPGSPH 7
+APG+PH
Sbjct: 677 TAPGNPH 683
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 SAPGSPHFV 9
+APGSP F+
Sbjct: 160 AAPGSPQFM 168
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 1 SAPGSPHFV 9
+APG P+ V
Sbjct: 137 TAPGGPYIV 145
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 SAPGSPHFV 9
+APGSP F+
Sbjct: 160 AAPGSPQFM 168
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 SAPGSPHFV 9
+APGSP F+
Sbjct: 160 AAPGSPQFM 168
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 1 SAPGSPHFV 9
+APG P+ V
Sbjct: 137 TAPGGPYIV 145
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 SAPGSPHFV 9
+APG P+ V
Sbjct: 137 TAPGGPYIV 145
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 SAPGSPH 7
+APG+PH
Sbjct: 676 TAPGNPH 682
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 3 PGSPHF 8
PG PHF
Sbjct: 134 PGDPHF 139
>sp|ORF3_HEVMY|PROTEIN ORF3|Hepatitis E virus genotype 1
Query: 1 SAPGSPHFVD 10
SAP PH VD
Sbjct: 97 SAPPLPHVVD 106
>sp|ORF3_HEVPA|PROTEIN ORF3|Hepatitis E virus genotype 1
Query: 1 SAPGSPHFVD 10
SAP PH VD
Sbjct: 97 SAPPLPHVVD 106
>sp|ORF3_HEVHY|PROTEIN ORF3|Hepatitis E virus genotype 1
Query: 1 SAPGSPHFVD 10
SAP PH VD
Sbjct: 97 SAPPLPHVVD 106
>sp|ORF3_HEVCH|PROTEIN ORF3|Hepatitis E virus genotype 1
Query: 1 SAPGSPHFVD 10
SAP PH VD
Sbjct: 97 SAPPLPHVVD 106
>sp|ORF3_HEVBU|PROTEIN ORF3|Hepatitis E virus genotype 1
Query: 1 SAPGSPHFVD 10
SAP PH VD
Sbjct: 97 SAPPLPHVVD 106
>sp|PG095_VARV|ENTRY-FUSION complex associated protein OPG095|Variola virus
Query: 2 APGSP 6
APGSP
Sbjct: 139 APGSP 143
>sp|PG095_VAR67|ENTRY-FUSION complex associated protein OPG095|Variola virus (isolate
Query: 2 APGSP 6
APGSP
Sbjct: 139 APGSP 143
>sp|PG095_VACCC|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain
Query: 2 APGSP 6
APGSP
Sbjct: 139 APGSP 143
>sp|PG095_VACCA|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain Ankara)
Query: 2 APGSP 6
APGSP
Sbjct: 139 APGSP 143
>sp|PG095_MONPV|ENTRY-FUSION complex associated protein OPG095|Monkeypox virus (MPXV)
Query: 2 APGSP 6
APGSP
Sbjct: 139 APGSP 143
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 1 SAPGSPHFV 9
S P + HFV
Sbjct: 289 SVPATSHFV 297
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 SAPGSP 6
+APGSP
Sbjct: 608 TAPGSP 613
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 1 SAPGSPHFV 9
+APG P+ V
Sbjct: 140 TAPGGPYIV 148
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 1 SAPGSPHFV 9
+APG P+ V
Sbjct: 141 TAPGGPYIV 149
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 1 SAPGSPHFV 9
+APG P+ V
Sbjct: 134 TAPGGPYTV 142
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 2 APGSPHFVD 10
APG+P F +
Sbjct: 1155 APGAPDFCE 1163
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 2 APGSPHFVD 10
APG+P F +
Sbjct: 1183 APGAPDFCE 1191
>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)
Query: 1 SAPGSPHFV 9
+APG P+ V
Sbjct: 129 TAPGGPYIV 137
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 SAPGSP 6
S PGSP
Sbjct: 612 SVPGSP 617
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 3 PGSPHF 8
PG PH
Sbjct: 15 PGPPHL 20
>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann
Query: 1 SAPGSPHFV 9
+APG P+ V
Sbjct: 136 AAPGGPYIV 144
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 1 SAPGSPHFV 9
+APG P+ V
Sbjct: 144 TAPGGPYKV 152
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 1 SAPGSPHFV 9
+APG P+ V
Sbjct: 144 TAPGGPYKV 152
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 APGSPHFVD 10
APG F+D
Sbjct: 3092 APGGKAFMD 3100
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 APGSPHFVD 10
APG F+D
Sbjct: 3092 APGGKAFMD 3100
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 APGSPHFVD 10
APG F+D
Sbjct: 3092 APGGKAFMD 3100
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 1 SAPGSPHFV 9
+APG P+ V
Sbjct: 144 TAPGGPYKV 152
>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)
Query: 1 SAPGSPHFV 9
+APG P+ V
Sbjct: 129 TAPGGPYIV 137
>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)
Query: 3 PGSPHFVD 10
PGSP F D
Sbjct: 41 PGSPGFRD 48
>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)
Query: 3 PGSPHFVD 10
PGSP F D
Sbjct: 41 PGSPGFRD 48
>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)
Query: 1 SAPGSPHFV 9
+APG P+ V
Sbjct: 140 TAPGGPYTV 148
>sp|CAHH_VARV|CELL surface-binding protein OPG105|Variola virus
Query: 4 GSPHFV 9
G PH++
Sbjct: 210 GKPHYI 215
>sp|CAHH_VAR67|CELL surface-binding protein OPG105|Variola virus (isolate
Query: 4 GSPHFV 9
G PH++
Sbjct: 210 GKPHYI 215
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 1 SAPGSPH 7
+APG P+
Sbjct: 137 TAPGGPY 143
>sp|CAHH_MONPZ|CELL surface-binding protein OPG105|Monkeypox virus (strain
Query: 4 GSPHFV 9
G PH++
Sbjct: 210 GKPHYI 215
>sp|CAHH_MONPV|CELL surface-binding protein OPG105|Monkeypox virus (MPXV)
Query: 4 GSPHFV 9
G PH++
Sbjct: 210 GKPHYI 215
>sp|CAHH_VACCA|CELL surface-binding protein OPG105|Vaccinia virus (strain Ankara)
Query: 4 GSPHFV 9
G PH++
Sbjct: 210 GKPHYI 215
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 SAPGSPHFV 9
S PG H++
Sbjct: 207 SRPGKKHYI 215
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 SAPGSPHFV 9
S PG H++
Sbjct: 207 SRPGKKHYI 215
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 SAPGSPHFV 9
S PG H++
Sbjct: 207 SRPGKKHYI 215
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 1 SAPGSPHFV 9
S PG H++
Sbjct: 207 SRPGKKHYI 215
>sp|CAHH_VACCT|CELL surface-binding protein OPG105|Vaccinia virus (strain Tian Tan)
Query: 4 GSPHFV 9
G PH++
Sbjct: 210 GKPHYI 215
111|SequenceR|560|551|PTSQTSAPGS
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 TSQTSAPG 9
TSQT PG
Sbjct: 4469 TSQTVKPG 4476
>sp|AP3A_SARS|ORF3A protein|Severe acute respiratory syndrome coronavirus
Query: 1 PTSQTSAP 8
PT+ TS P
Sbjct: 266 PTTTTSVP 273
>sp|AP3A_SARS2|ORF3A protein|Severe acute respiratory syndrome coronavirus
Query: 1 PTSQTSAP 8
PT+ TS P
Sbjct: 267 PTTTTSVP 274
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 PTSQTSAPG 9
PT + S PG
Sbjct: 362 PTKEISIPG 370
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 PTSQTSAPG 9
PT + S PG
Sbjct: 362 PTKEISIPG 370
>sp|B4_HHV6Z|PROTEIN B4|Human herpesvirus 6B (strain Z29)
Query: 1 PTSQTSAP 8
P+S TSAP
Sbjct: 125 PSSGTSAP 132
112|SequenceR|565|556|TASRRPTSQT
>sp|ICP47_HHV2H|ICP47 protein|Human herpesvirus 2 (strain HG52)
Query: 2 ASRRPTSQT 10
ASR PT QT
Sbjct: 62 ASRNPTQQT 70
>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)
Query: 1 TASRRPT 7
TASR+PT
Sbjct: 63 TASRQPT 69
113|SequenceR|570|561|SASTSTASRR
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 SASTSTASRR 10
S TST SRR
Sbjct: 609 STQTSTISRR 618
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 SASTSTASRR 10
SAST+T ++R
Sbjct: 490 SASTTTPAKR 499
114|SequenceR|575|566|VRLTPSASTS
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VRLTPSAST 9
V +TP AST
Sbjct: 440 VEITPQAST 448
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 1 VRLTPSAST 9
V L+PSAST
Sbjct: 235 VYLSPSAST 243
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 LTPSASTS 10
+TP AST+
Sbjct: 442 ITPQASTT 449
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 LTPSASTS 10
+TP AST+
Sbjct: 442 ITPQASTT 449
115|SequenceR|580|571|TAGEGVRLTP
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 1 TAGEGVRLTP 10
TAG G LTP
Sbjct: 273 TAGNGDNLTP 282
>sp|NEF_HV1JR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 TAGEGVRL 8
TAG GVR
Sbjct: 138 TAGPGVRF 145
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 3 GEGVRLT 9
G+G+RL+
Sbjct: 354 GQGIRLS 360
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 3 GEGVRLT 9
G+G+RL+
Sbjct: 354 GQGIRLS 360
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 3 GEGVRLT 9
G+G+RL+
Sbjct: 354 GQGIRLS 360
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 4 EGVRLTP 10
EGV TP
Sbjct: 101 EGVNFTP 107
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 TAGEGVRL 8
T+G+GV L
Sbjct: 197 TSGQGVEL 204
116|SequenceR|585|576|GFPDFTAGEG
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 2 FPDFTAGEG 10
FP+F+ G+G
Sbjct: 120 FPNFSGGDG 128
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 1 GFPDFTA 7
G PDFT+
Sbjct: 487 GLPDFTS 493
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 1 GFPDFTA 7
G PDFT+
Sbjct: 487 GLPDFTS 493
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 1 GFPDFTAGE 9
G DFT+GE
Sbjct: 271 GSSDFTSGE 279
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 FPDFTAGEG 10
PD T G+G
Sbjct: 412 LPDGTGGDG 420
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 FPDFTAGEG 10
PD T G+G
Sbjct: 412 LPDGTGGDG 420
>sp|UL38_HCMVM|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 FTAGEG 10
+TAGEG
Sbjct: 317 YTAGEG 322
>sp|UL38_HCMVA|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 FTAGEG 10
+TAGEG
Sbjct: 317 YTAGEG 322
>sp|PG144_VARV|VIRION membrane protein OPG144 precursor|Variola virus
Query: 4 DFTAGEG 10
DF+AG G
Sbjct: 12 DFSAGAG 18
>sp|PG144_VAR67|VIRION membrane protein OPG144 precursor|Variola virus (isolate
Query: 4 DFTAGEG 10
DF+AG G
Sbjct: 12 DFSAGAG 18
>sp|PG144_VACCC|VIRION membrane protein OPG144 precursor|Vaccinia virus (strain
Query: 4 DFTAGEG 10
DF+AG G
Sbjct: 12 DFSAGAG 18
>sp|PG144_MONPV|VIRION membrane protein OPG144 precursor|Monkeypox virus (MPXV)
Query: 4 DFTAGEG 10
DF+AG G
Sbjct: 12 DFSAGAG 18
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 FPDFTAGE 9
FP++ AG+
Sbjct: 1001 FPEYGAGQ 1008
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 FPDFTAGE 9
FP++ AG+
Sbjct: 1002 FPEYGAGQ 1009
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 FPDFTAGE 9
FP++ AG+
Sbjct: 1002 FPEYGAGQ 1009
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 FPDFTAGE 9
FP++ AG+
Sbjct: 1001 FPEYGAGQ 1008
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 FPDFTAGE 9
FP++ AG+
Sbjct: 1001 FPEYGAGQ 1008
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 3 PDFTAGE 9
PDFT+ E
Sbjct: 620 PDFTSYE 626
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 FPDFTAGE 9
F DF AG+
Sbjct: 2114 FKDFAAGK 2121
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 FPDFTAGE 9
F DF AG+
Sbjct: 2115 FKDFAAGK 2122
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 FPDFTAGE 9
F DF AG+
Sbjct: 2115 FKDFAAGK 2122
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 FPDFTAGE 9
F DF AG+
Sbjct: 2115 FKDFAAGK 2122
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 FPDFTAGE 9
F DF AG+
Sbjct: 2114 FKDFAAGK 2121
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 FPDFTAGE 9
F DF AG+
Sbjct: 2115 FKDFAAGK 2122
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 FPDFTAGE 9
FPD TA +
Sbjct: 184 FPDLTAAD 191
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 FPDFTAGE 9
FPD TA +
Sbjct: 184 FPDLTAAD 191
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 GFPDFTAGE 9
G P +T GE
Sbjct: 523 GIPTYTWGE 531
>sp|PRO_ADE17|PROTEASE adenovirus D serotype 17
Query: 2 FPDFTAGE 9
FP F AG+
Sbjct: 30 FPGFLAGD 37
>sp|PRO_ADE09|PROTEASE adenovirus D serotype 9
Query: 2 FPDFTAGE 9
FP F AG+
Sbjct: 30 FPGFLAGD 37
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 GFPDFTAGE 9
G P +T GE
Sbjct: 523 GVPTYTWGE 531
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 GFPDFTAGE 9
G P +T GE
Sbjct: 525 GVPTYTWGE 533
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 1 GFPDFTAGEG 10
G P TAG G
Sbjct: 499 GSPRSTAGTG 508
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 GFPDFTAGE 9
G P +T GE
Sbjct: 524 GVPTYTWGE 532
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GFPDFTAGE 9
G P +T GE
Sbjct: 524 GVPTYTWGE 532
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 GFPDFTAGE 9
G P +T GE
Sbjct: 525 GVPTYTWGE 533
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 GFPDFTAGE 9
G P +T GE
Sbjct: 524 GVPTYTWGE 532
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 GFPDFTAGE 9
G P +T GE
Sbjct: 525 GVPTYTWGE 533
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 GFPDFTAGE 9
G P +T GE
Sbjct: 525 GVPTYTWGE 533
117|SequenceR|590|581|PKSPAGFPDF
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 3 SPAGFPDF 10
+P GFPDF
Sbjct: 319 APVGFPDF 326
>sp|TRX2_HHV11|TRIPLEX capsid protein 2|Human herpesvirus 1 (strain 17)
Query: 1 PKSPAGFPDF 10
P++P G PD
Sbjct: 167 PRNPGGLPDL 176
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PKSPAGFPD 9
P++P GF D
Sbjct: 18 PETPNGFDD 26
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas)
Query: 1 PKSPAGFPD 9
P++P GF D
Sbjct: 18 PETPNGFDD 26
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 1 PKSPAGFPDF 10
P SP G P++
Sbjct: 389 PGSPPGIPEY 398
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PKSPAGFPDF 10
PK P G P +
Sbjct: 144 PKQPTGLPAY 153
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 2 KSPAGFP 8
+SPAG P
Sbjct: 78 ESPAGLP 84
>sp|EV45_HHV23|ENVELOPE protein UL45|Human herpesvirus 2 (strain 333)
Query: 1 PKSPAGFPDF 10
P+SP GF F
Sbjct: 152 PRSPGGFVRF 161
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PKSPAGFPDF 10
PK P G P +
Sbjct: 144 PKQPTGLPAY 153
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 3 SPAGFPDF 10
+ AGFP F
Sbjct: 203 TSAGFPSF 210
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 3 SPAGFPDF 10
+ AGFP F
Sbjct: 203 TSAGFPSF 210
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 3 SPAGFPDF 10
+ AGFP F
Sbjct: 203 TSAGFPSF 210
>sp|EV45_HHV2H|ENVELOPE protein UL45|Human herpesvirus 2 (strain HG52)
Query: 1 PKSPAGFPDF 10
P+SP GF F
Sbjct: 152 PRSPGGFVRF 161
>sp|EV45_HHV1M|ENVELOPE protein UL45|Human herpesvirus 1 (strain MP)
Query: 1 PKSPAGFPDF 10
P+SP GF F
Sbjct: 152 PRSPGGFVQF 161
>sp|EV45_HHV11|ENVELOPE protein UL45|Human herpesvirus 1 (strain 17)
Query: 1 PKSPAGFPDF 10
P+SP GF F
Sbjct: 152 PRSPGGFVQF 161
>sp|EV45_HHV1K|ENVELOPE protein UL45|Human herpesvirus 1 (strain KOS)
Query: 1 PKSPAGFPDF 10
P+SP GF F
Sbjct: 152 PRSPGGFVQF 161
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 KSPAGFPDF 10
+SP+ FP F
Sbjct: 356 QSPSAFPYF 364
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 3 SPAGFPD 9
SP G PD
Sbjct: 90 SPGGSPD 96
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 3 SPAGFPDF 10
+P GFPD
Sbjct: 316 APIGFPDL 323
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 6 GFPDF 10
GFP+F
Sbjct: 2113 GFPEF 2117
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 KSPAGFPDF 10
+SP P+F
Sbjct: 361 QSPCALPEF 369
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 KSPAGFPDF 10
+SP P+F
Sbjct: 361 QSPCALPEF 369
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 KSPAGFPDF 10
+SP P+F
Sbjct: 350 QSPCAMPEF 358
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 KSPAGFPDF 10
+SP P+F
Sbjct: 350 QSPCAMPEF 358
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 PKSPAGFPD 9
P PA PD
Sbjct: 2356 PTQPASTPD 2364
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 KSPAGFPDF 10
+SP P+F
Sbjct: 351 QSPCAMPEF 359
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 1 PKSPAGFPD 9
P+SP G D
Sbjct: 204 PESPGGQAD 212
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 KSPAGFPDF 10
+SP P+F
Sbjct: 360 QSPCAIPEF 368
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 KSPAGFPDF 10
+SP P+F
Sbjct: 360 QSPCAIPEF 368
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 KSPAGFPDF 10
+SP P+F
Sbjct: 360 QSPCAIPEF 368
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 KSPAGFPDF 10
+SP P+F
Sbjct: 360 QSPCAIPEF 368
118|SequenceR|595|586|LDQGSPKSPA
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 LDQGSPKSPA 10
LD+ +PK PA
Sbjct: 647 LDKEAPKRPA 656
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 LDQGSPKSPA 10
LD+ +PK PA
Sbjct: 647 LDKEAPKRPA 656
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 1 LDQGSPKSPA 10
+DQG K P
Sbjct: 286 IDQGGNKRPG 295
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 1 LDQGSPKSPA 10
+DQG K P
Sbjct: 286 IDQGGNKRPG 295
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LDQGSPKSPA 10
+DQG K P
Sbjct: 286 IDQGGNKRPG 295
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LDQGSPKSPA 10
+DQG K P
Sbjct: 286 IDQGGNKRPG 295
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 LDQGSPKSPA 10
+DQG K P
Sbjct: 286 IDQGGNKRPG 295
>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GSPKSPA 10
G P++PA
Sbjct: 248 GEPRTPA 254
>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GSPKSPA 10
G P++PA
Sbjct: 248 GEPRTPA 254
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 1 LDQGSPKSPA 10
+D+G +SP+
Sbjct: 762 MDRGDAQSPS 771
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 LDQGSPKSP 9
L +G+PK P
Sbjct: 295 LPEGTPKEP 303
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 1 LDQGSPKSP 9
L +G+PK P
Sbjct: 295 LPEGTPKEP 303
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 1 LDQGSPKSP 9
L +G+PK P
Sbjct: 295 LPEGTPKEP 303
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 QGSPKSPA 10
+G+P+ PA
Sbjct: 1679 EGTPEQPA 1686
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 LDQGSPKSPA 10
+D G+P SP+
Sbjct: 1039 IDAGTPCSPS 1048
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 LDQGSPKSP 9
L +G+PK P
Sbjct: 289 LPEGTPKDP 297
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 LDQGSPKSP 9
L +G+PK P
Sbjct: 282 LPEGTPKDP 290
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 LDQGSPKSP 9
L +G+PK P
Sbjct: 289 LPEGTPKDP 297
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 LDQGSPKSP 9
L +G+PK P
Sbjct: 282 LPEGTPKDP 290
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 LDQGSPKSP 9
L +G+PK P
Sbjct: 289 LPEGTPKDP 297
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 2 DQGSPKSP 9
D GSP SP
Sbjct: 603 DVGSPLSP 610
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 LDQGSPKSP 9
L +G+PK P
Sbjct: 289 LPEGTPKDP 297
119|SequenceR|600|591|LFSGLLDQGS
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LFSGLLDQGS 10
+FSGLL GS
Sbjct: 465 IFSGLLSSGS 474
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 1 LFSGLLDQGS 10
+FSGLL GS
Sbjct: 464 IFSGLLSSGS 473
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 FSGLLD 7
FSGLLD
Sbjct: 1265 FSGLLD 1270
>sp|NCAP_PTPV|NUCLEOPROTEIN toro phlebovirus
Query: 2 FSGLLDQ 8
F+GL+DQ
Sbjct: 148 FAGLIDQ 154
>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4
Query: 4 GLLDQGS 10
G+LD+GS
Sbjct: 5 GVLDRGS 11
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 1 LFSGLLDQG 9
++SGL D G
Sbjct: 11 IYSGLHDNG 19
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 FSGLLDQG 9
FSG +D+G
Sbjct: 1855 FSGPVDKG 1862
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 FSGLLDQG 9
FSG +D+G
Sbjct: 1855 FSGPVDKG 1862
>sp|NCAP_UUKS|NUCLEOPROTEIN virus (strain S23) (UUKV)
Query: 2 FSGLLDQ 8
F+GL+D+
Sbjct: 158 FAGLIDE 164
>sp|CORE5_ADE40|CORE-CAPSID bridging protein|Human adenovirus F serotype 40
Query: 3 SGLLDQG 9
+GLLD G
Sbjct: 49 AGLLDDG 55
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 LFSGLLDQG 9
LF G +D G
Sbjct: 424 LFKGPIDSG 432
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 LFSGLLDQG 9
LF G +D G
Sbjct: 425 LFKGPIDSG 433
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 LFSGLLDQG 9
LF G +D G
Sbjct: 425 LFKGPIDSG 433
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LFSGLLDQGS 10
L GLL +GS
Sbjct: 4789 LSKGLLKEGS 4798
120|SequenceR|605|596|ASSTNLFSGL
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 STNLFSG 9
STNLF G
Sbjct: 2867 STNLFEG 2873
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 STNLFSG 9
STNLF G
Sbjct: 2867 STNLFEG 2873
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 5 NLFSGL 10
NLFSGL
Sbjct: 533 NLFSGL 538
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 2 SSTNLFSG 9
+S+NLF+G
Sbjct: 562 NSSNLFTG 569
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 3 STNLFSGL 10
+TNL +GL
Sbjct: 35 ATNLLNGL 42
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 5 NLFSGL 10
NLF+GL
Sbjct: 533 NLFNGL 538
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 4 TNLFSG 9
+NLFSG
Sbjct: 119 SNLFSG 124
121|SequenceR|610|601|FPDSSASSTN
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 DSSASSTN 10
DSS +STN
Sbjct: 184 DSSTNSTN 191
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 FPDSSASS 8
FP SASS
Sbjct: 2147 FPRDSASS 2154
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 FPDSSASS 8
FP SASS
Sbjct: 2147 FPRDSASS 2154
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PDSSASSTN 10
P SS + TN
Sbjct: 450 PSSSGADTN 458
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PDSSASSTN 10
P SS + TN
Sbjct: 448 PSSSGADTN 456
>sp|GL_VZVO|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Oka vaccine)
Query: 3 DSSASSTN 10
DS+ SSTN
Sbjct: 134 DSTPSSTN 141
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 DSSASSTN 10
D+S +STN
Sbjct: 184 DNSTNSTN 191
>sp|GL_VZVD|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 DSSASSTN 10
DS+ SSTN
Sbjct: 133 DSTPSSTN 140
>sp|VFUS_ORFN2|10 kDa fusion protein|Orf virus (strain NZ2) (OV
Query: 2 PDSSASSTN 10
PD + +STN
Sbjct: 13 PDDTGNSTN 21
122|SequenceR|615|606|RTPQLFPDSS
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 RTPQLFPD 8
RTPQ F D
Sbjct: 106 RTPQRFTD 113
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 RTPQLFPD 8
RTPQ F D
Sbjct: 106 RTPQRFTD 113
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 1 RTPQLFPD 8
RTPQ F D
Sbjct: 106 RTPQRFTD 113
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 1 RTPQLFPD 8
RTPQ F D
Sbjct: 106 RTPQRFTD 113
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 1 RTPQLFPD 8
RTPQ F D
Sbjct: 106 RTPQRFTD 113
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 RTPQLFPD 8
RTPQ F D
Sbjct: 106 RTPQRFTD 113
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 TPQLFPDS 9
TP LFP S
Sbjct: 298 TPSLFPTS 305
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 TPQLFPDS 9
TP LFP S
Sbjct: 298 TPSLFPTS 305
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 TPQLFPDS 9
TP LFP S
Sbjct: 298 TPSLFPTS 305
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 TPQLFPDS 9
TP LFP S
Sbjct: 298 TPSLFPTS 305
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 RTPQLFPDSS 10
R P FP+S+
Sbjct: 2102 RKPGYFPEST 2111
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 RTPQLFPDSS 10
R P FP+S+
Sbjct: 2094 RKPGYFPEST 2103
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 TPQLFPDS 9
TP LFP S
Sbjct: 298 TPSLFPTS 305
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 RTPQLFPDSS 10
R P FP+S+
Sbjct: 2093 RKPGYFPEST 2102
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 TPQLFPDSS 10
T + FPDS+
Sbjct: 1820 TTEAFPDSN 1828
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 RTPQLFPDSS 10
R +LFPD++
Sbjct: 534 RLTRLFPDAT 543
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RTPQLFPDSS 10
R +LFPD++
Sbjct: 534 RLTRLFPDAT 543
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 PQLFPDSS 10
PQ+ PDS
Sbjct: 143 PQVLPDSG 150
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 PQLFPDSS 10
PQ+ PDS
Sbjct: 143 PQVLPDSG 150
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 PQLFPDSS 10
PQ+ PDS
Sbjct: 143 PQVLPDSG 150
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RTPQLFPDSS 10
R +LFPD++
Sbjct: 535 RLTRLFPDAT 544
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 2 TPQLFPDSS 10
TP+ FP S
Sbjct: 320 TPETFPTVS 328
>sp|E1A_ADE02|EARLY E1A protein|Human adenovirus C serotype 2
Query: 4 QLFPDS 9
Q+FPDS
Sbjct: 64 QIFPDS 69
>sp|E1A_ADE05|EARLY E1A protein|Human adenovirus C serotype 5
Query: 4 QLFPDS 9
Q+FPDS
Sbjct: 64 QIFPDS 69
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 2 TPQLFPDSS 10
TP+ FP S
Sbjct: 320 TPETFPTVS 328
>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 PQLFPDSS 10
PQ+ PDS
Sbjct: 143 PQVLPDSG 150
>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 PQLFPDSS 10
PQ+ PDS
Sbjct: 143 PQVLPDSG 150
>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 PQLFPDSS 10
PQ+ PDS
Sbjct: 143 PQVLPDSG 150
>sp|BZLF1_EBVG|LYTIC switch protein BZLF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 TPQLFPDS 9
PQLFP S
Sbjct: 91 APQLFPVS 98
>sp|BZLF1_EBVB9|LYTIC switch protein BZLF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 TPQLFPDS 9
PQLFP S
Sbjct: 91 APQLFPVS 98
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 1 RTPQLF 6
RTPQ+F
Sbjct: 134 RTPQVF 139
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 1 RTPQLF 6
RTPQ+F
Sbjct: 134 RTPQVF 139
>sp|BZLF1_EBVA8|LYTIC switch protein BZLF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 TPQLFPDS 9
PQLFP S
Sbjct: 91 APQLFPVS 98
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 TPQLFPD 8
P+LFP+
Sbjct: 876 APELFPE 882
123|SequenceR|620|611|TPSPSRTPQL
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 TPSPSRTPQL 10
TPSP PQ+
Sbjct: 223 TPSPGARPQV 232
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PSPSRTP 8
P PSRTP
Sbjct: 352 PRPSRTP 358
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PSPSRTP 8
P PSRTP
Sbjct: 352 PRPSRTP 358
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PSPSRTP 8
P PSRTP
Sbjct: 352 PRPSRTP 358
>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TPSPSRTPQL 10
TPSPS TP L
Sbjct: 386 TPSPSVTPAL 395
>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 TPSPSRTPQL 10
TPSPS TP L
Sbjct: 386 TPSPSVTPAL 395
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 TPSPSRTP 8
TP P RTP
Sbjct: 264 TPRPLRTP 271
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 2 PSPSRTPQL 10
PSP PQ+
Sbjct: 224 PSPGTRPQV 232
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PSPSRTPQ 9
P+PSR PQ
Sbjct: 329 PAPSREPQ 336
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PSPSRTPQ 9
P+PSR PQ
Sbjct: 329 PAPSRKPQ 336
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PSPSRTPQ 9
P+PSR PQ
Sbjct: 329 PAPSREPQ 336
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 2 PSPSRTPQL 10
PSP PQ+
Sbjct: 224 PSPGARPQV 232
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 2 PSPSRTPQL 10
PSP PQ+
Sbjct: 224 PSPGARPQV 232
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 TPSPSRTPQ 9
TP+P R PQ
Sbjct: 965 TPAPRRLPQ 973
Query: 1 TPSPSR 6
TPSPSR
Sbjct: 1182 TPSPSR 1187
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 TPSPSRTPQ 9
TP+P R PQ
Sbjct: 969 TPAPRRLPQ 977
Query: 1 TPSPSR 6
TPSPSR
Sbjct: 1184 TPSPSR 1189
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 TPSPSRTPQL 10
PSPS TP L
Sbjct: 247 VPSPSSTPLL 256
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 TPSPSRTPQL 10
+PSP TP +
Sbjct: 95 SPSPDGTPSV 104
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 TPSPSRTPQL 10
+PSP TP +
Sbjct: 95 SPSPDGTPSV 104
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 TPSPSRTPQ 9
TP P R P+
Sbjct: 264 TPRPLRLPE 272
>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain
Query: 1 TPSPSRTPQ 9
+PSPS+T Q
Sbjct: 109 SPSPSKTYQ 117
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 2 PSPSRTPQL 10
PSP R P++
Sbjct: 74 PSPERYPRV 82
>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2
Query: 2 PSPSRTPQL 10
PSP R P++
Sbjct: 74 PSPERHPRV 82
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PHOSP_PI4HA|PHOSPHOPROTEIN parainfluenza 4a virus (strain
Query: 2 PSPSRTPQ 9
PSPS+T Q
Sbjct: 110 PSPSKTYQ 117
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|V_PI4HB|NON-STRUCTURAL protein V|Human parainfluenza 4b virus (strain
Query: 1 TPSPSRTPQ 9
+PSPS+T Q
Sbjct: 109 SPSPSKTYQ 117
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPIRLP 271
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 TPSPSR 6
TPSPSR
Sbjct: 1183 TPSPSR 1188
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 1 TPSPSRTPQL 10
+PSP RTP +
Sbjct: 145 SPSPPRTPSM 154
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 241 TPRPLRLP 248
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 257 TPRPLRLP 264
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|UL24_HHV2H|PROTEIN UL24|Human herpesvirus 2 (strain HG52)
Query: 2 PSPSRTPQ 9
PSP+R P+
Sbjct: 223 PSPTRDPE 230
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 257 TPRPLRLP 264
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 260 TPRPLRLP 267
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PSPSRTPQL 10
P+P +TPQ+
Sbjct: 649 PTPHQTPQV 657
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PSPSRTPQL 10
P+P +TPQ+
Sbjct: 649 PTPHQTPQV 657
>sp|V_PI4HA|NON-STRUCTURAL protein V|Human parainfluenza 4a virus (strain
Query: 2 PSPSRTPQ 9
PSPS+T Q
Sbjct: 110 PSPSKTYQ 117
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 TPSPSRTP 8
TP P R P
Sbjct: 264 TPRPLRLP 271
124|SequenceR|625|616|SSAHVTPSPS
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 1 SSAHVTPSP 9
SAH PSP
Sbjct: 421 DSAHCAPSP 429
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 1 SSAHVTP 7
S+ H+TP
Sbjct: 91 SAVHITP 97
>sp|PG130_VACCC|39KDA core protein OPG130|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 HVTPSP 9
H+TP P
Sbjct: 77 HITPQP 82
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 5 VTPSPS 10
+TP+PS
Sbjct: 639 ITPNPS 644
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 5 VTPSPS 10
+TP+PS
Sbjct: 639 ITPNPS 644
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 4 HVTPSPS 10
H++PSP+
Sbjct: 306 HISPSPA 312
>sp|OX2V_HHV6Z|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6B (strain
Query: 2 SAHVTPSP 9
SAH P P
Sbjct: 17 SAHFVPRP 24
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 3 AHVTPSPS 10
AHVTP S
Sbjct: 385 AHVTPEIS 392
125|SequenceR|630|621|NVAPTSSAHV
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 NVAPTSS 7
N+APTSS
Sbjct: 336 NIAPTSS 342
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 NVAPTSS 7
N+APTSS
Sbjct: 336 NIAPTSS 342
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 NVAPTSS 7
N+APTSS
Sbjct: 336 NIAPTSS 342
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 NVAPTSS 7
N+APTSS
Sbjct: 336 NIAPTSS 342
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 NVAPTSS 7
N+APTSS
Sbjct: 334 NIAPTSS 340
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 NVAPTSS 7
N+APTSS
Sbjct: 336 NIAPTSS 342
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 1 NVAPTSSAHV 10
NVAPT++ V
Sbjct: 34 NVAPTAAEKV 43
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 APTSSAH 9
APT S H
Sbjct: 597 APTDSGH 603
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 APTSSAH 9
APT S H
Sbjct: 597 APTDSGH 603
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 APTSSAH 9
APT S H
Sbjct: 597 APTDSGH 603
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 APTSSAH 9
APT S H
Sbjct: 597 APTDSGH 603
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PTSSAH 9
PTSSAH
Sbjct: 41 PTSSAH 46
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 NVAPTSS 7
NV PTSS
Sbjct: 357 NVCPTSS 363
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 3 APTSSAH 9
APT S H
Sbjct: 597 APTDSGH 603
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 VAPTSSAHV 10
+AP +S H+
Sbjct: 1558 IAPINSPHI 1566
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 VAPTSSAHV 10
+AP +S H+
Sbjct: 1558 IAPINSPHI 1566
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 VAPTSSAHV 10
+AP +S H+
Sbjct: 1558 IAPINSPHI 1566
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 1 NVAPTSSAHV 10
+V+P++S H+
Sbjct: 148 DVSPSTSVHI 157
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 VAPTSSAHV 10
+ PT AHV
Sbjct: 826 LTPTGLAHV 834
126|SequenceR|635|626|VDPQINVAPT
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 PQINVAPT 10
P IN+APT
Sbjct: 276 PYINIAPT 283
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 PQINVAPT 10
P +N+APT
Sbjct: 333 PYVNIAPT 340
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 3 PQINVAPT 10
P +N+APT
Sbjct: 333 PYVNIAPT 340
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 PQINVAPT 10
P +N+APT
Sbjct: 331 PYVNIAPT 338
>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)
Query: 1 VDPQINV 7
+DP+INV
Sbjct: 256 LDPKINV 262
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 PQINVAPT 10
P +N+APT
Sbjct: 333 PYVNIAPT 340
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 PQINVAPT 10
P +N+APT
Sbjct: 333 PYVNIAPT 340
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 VDPQINVA 8
+DPQIN A
Sbjct: 1979 LDPQINSA 1986
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DPQINVAP 9
DP+IN+ P
Sbjct: 1129 DPRINLVP 1136
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DPQINVAP 9
DP+IN+ P
Sbjct: 1129 DPRINLVP 1136
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen
Query: 1 VDPQINV 7
+DP+INV
Sbjct: 256 LDPKINV 262
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DPQINVAP 9
DP+IN+ P
Sbjct: 1129 DPRINLVP 1136
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 1 VDPQINVAPT 10
++ QINV PT
Sbjct: 92 INNQINVQPT 101
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DPQINVAP 9
DP+IN+ P
Sbjct: 1129 DPRINLVP 1136
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 1 VDPQINV 7
+DP+INV
Sbjct: 258 LDPKINV 264
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 3 PQINVAPT 10
P +N+APT
Sbjct: 333 PYVNIAPT 340
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 PQINVAP 9
P +NVAP
Sbjct: 649 PTLNVAP 655
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 DPQINVAPT 10
DP++ V P+
Sbjct: 1329 DPRVTVGPS 1337
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 PQINVAPT 10
P +NV PT
Sbjct: 354 PYVNVCPT 361
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 1 VDPQINV 7
+ PQINV
Sbjct: 107 LSPQINV 113
127|SequenceR|640|631|DWGGSVDPQI
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 DWGGSVDPQI 10
+WGGS++ +
Sbjct: 98 EWGGSLEASM 107
>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 175 WGMDIDP 181
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 2 WGGSVDPQ 9
W G DPQ
Sbjct: 333 WNGDHDPQ 340
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 2 WGGSVDPQI 10
W G+++P +
Sbjct: 441 WTGTINPGV 449
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 2 WGGSVDPQI 10
W G+++P +
Sbjct: 451 WTGTINPGV 459
>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|VP7_ROTH3|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 5 SVDPQI 10
SVDPQ+
Sbjct: 128 SVDPQL 133
>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 5 SVDPQI 10
SVDPQ+
Sbjct: 128 SVDPQL 133
>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|HBEAG_HBVA7|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|HBEAG_HBVA5|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 5 SVDPQI 10
SVDPQ+
Sbjct: 128 SVDPQL 133
>sp|VP7_ROTYO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 5 SVDPQI 10
SVDPQ+
Sbjct: 128 SVDPQL 133
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 WGGSV 6
WGGSV
Sbjct: 147 WGGSV 151
>sp|HBEAG_HBVD6|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|HBEAG_HBVC3|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|HBEAG_HBVC0|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|HBEAG_HBVB4|EXTERNAL core antigen|Hepatitis B virus genotype B/C
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|HBEAG_HBVB2|EXTERNAL core antigen|Hepatitis B virus genotype B2
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|VP7_ROTHM|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 5 SVDPQI 10
SVDPQ+
Sbjct: 128 SVDPQL 133
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 WGGSV 6
WGGSV
Sbjct: 147 WGGSV 151
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 WGGSVDPQ 9
W + DPQ
Sbjct: 392 WSANSDPQ 399
>sp|HBEAG_HBVD3|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|HBEAG_HBVC2|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 WGGSV 6
WGGSV
Sbjct: 147 WGGSV 151
>sp|HBEAG_HBVF6|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 5 SVDPQI 10
SVDPQ+
Sbjct: 128 SVDPQL 133
>sp|HBEAG_HBVF1|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|HBEAG_HBVCJ|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|VP7_ROTAM|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 5 SVDPQI 10
SVDPQ+
Sbjct: 128 SVDPQL 133
>sp|HBEAG_HBVC7|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|VP7_ROTHP|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 5 SVDPQI 10
SVDPQ+
Sbjct: 128 SVDPQM 133
>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 5 SVDPQI 10
SVDPQ+
Sbjct: 128 SVDPQL 133
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 3 GGSVDPQ 9
GGSV P+
Sbjct: 445 GGSVSPE 451
>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 3 GGSVDPQI 10
GG+ DP++
Sbjct: 195 GGACDPRL 202
>sp|VP7_ROTHX|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 5 SVDPQI 10
SVDPQ+
Sbjct: 128 SVDPQL 133
>sp|VP7_ROTHW|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 5 SVDPQI 10
SVDPQ+
Sbjct: 128 SVDPQL 133
>sp|PG036_VARV|PROTEIN OPG036|Variola virus
Query: 3 GGSVDPQI 10
G S+DP I
Sbjct: 26 GSSMDPNI 33
>sp|PG036_VAR67|PROTEIN OPG036|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 GGSVDPQI 10
G S+DP I
Sbjct: 26 GSSMDPNI 33
>sp|PG036_VACCC|PROTEIN OPG036|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GGSVDPQI 10
G S+DP I
Sbjct: 26 GSSMDPNI 33
>sp|VP7_ROTHK|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 5 SVDPQI 10
SVDPQ+
Sbjct: 128 SVDPQL 133
>sp|VP7_ROTHJ|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 5 SVDPQI 10
SVDPQ+
Sbjct: 128 SVDPQL 133
>sp|VP7_ROTAD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 5 SVDPQI 10
SVDPQ+
Sbjct: 128 SVDPQL 133
>sp|HBEAG_HBVA8|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|HBEAG_HBVB1|EXTERNAL core antigen|Hepatitis B virus genotype B1
Query: 2 WGGSVDP 8
WG +DP
Sbjct: 28 WGMDIDP 34
>sp|VP7_ROTH4|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 5 SVDPQI 10
SVDPQ+
Sbjct: 128 SVDPQL 133
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 DWGGSVDPQ 9
D+G ++DP+
Sbjct: 776 DYGCAIDPE 784
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 4 GSVDPQI 10
G+VDP++
Sbjct: 374 GTVDPKL 380
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 2 WGGSV 6
WGG+V
Sbjct: 482 WGGAV 486
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 WGGSVD 7
W GSVD
Sbjct: 1856 WVGSVD 1861
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 WGGSVD 7
W GSVD
Sbjct: 1856 WVGSVD 1861
>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 5 SVDPQI 10
S+DPQ+
Sbjct: 128 SIDPQL 133
>sp|UL76_HCMVM|PROTEIN UL76|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GGSVDPQI 10
GG+V+P +
Sbjct: 280 GGAVEPAV 287
>sp|UL76_HCMVA|PROTEIN UL76|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GGSVDPQI 10
GG+V+P +
Sbjct: 280 GGAVEPAV 287
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 WGGSVDP 8
W VDP
Sbjct: 2203 WSAGVDP 2209
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 WGGSVD 7
W GS+D
Sbjct: 1856 WVGSID 1861
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 DWGGSV 6
+W GSV
Sbjct: 174 EWSGSV 179
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 DWGGSV 6
+W GSV
Sbjct: 174 EWSGSV 179
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 DWGGSV 6
+W GSV
Sbjct: 174 EWSGSV 179
128|SequenceR|645|636|PKAHWDWGGS
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PKAHWDWGG 9
PK+HW W G
Sbjct: 277 PKSHWRWDG 285
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PKAHWDWGG 9
PK+HW W G
Sbjct: 277 PKSHWRWDG 285
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 1 PKAHWDW 7
PK HW W
Sbjct: 866 PKKHWLW 872
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 2 KAHWDWGGS 10
KAHWD G +
Sbjct: 20 KAHWDSGAT 28
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 2 KAHWDWGGS 10
KAHWD G +
Sbjct: 20 KAHWDSGAT 28
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 5 WDWGG 9
WDW G
Sbjct: 556 WDWSG 560
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 PKAHW 5
P+AHW
Sbjct: 232 PRAHW 236
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 PKAHW 5
P+AHW
Sbjct: 231 PRAHW 235
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 PKAHW 5
P+AHW
Sbjct: 231 PRAHW 235
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 PKAHWD 6
PKA WD
Sbjct: 143 PKAFWD 148
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 PKAHW 5
P+AHW
Sbjct: 231 PRAHW 235
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 PKAHW 5
P+AHW
Sbjct: 231 PRAHW 235
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 PKAHW 5
P+AHW
Sbjct: 232 PRAHW 236
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PKAHWDW 7
PK +W W
Sbjct: 729 PKKNWIW 735
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 5 WDWGGS 10
+DWGGS
Sbjct: 657 YDWGGS 662
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 2 KAHWDWGGS 10
K W WGG+
Sbjct: 565 KFDWKWGGN 573
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 5 WDWGGS 10
+DWGGS
Sbjct: 661 YDWGGS 666
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 5 WDWGGS 10
+DWGGS
Sbjct: 655 YDWGGS 660
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 KAHWD 6
K HWD
Sbjct: 1759 KTHWD 1763
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 PKAHWDWGGS 10
P+AH+ W S
Sbjct: 677 PRAHYHWRKS 686
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PKAHWDWG 8
P+AH D G
Sbjct: 1115 PRAHVDLG 1122
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 WDWGG 9
W WGG
Sbjct: 14 WRWGG 18
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 PKAHWD 6
PK WD
Sbjct: 142 PKVFWD 147
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 5 WDWGGS 10
W WGG+
Sbjct: 585 WIWGGN 590
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 KAHWD 6
K HWD
Sbjct: 1079 KDHWD 1083
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 5 WDWGGS 10
W WGG+
Sbjct: 585 WIWGGN 590
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 5 WDWGGS 10
W WGG+
Sbjct: 585 WIWGGN 590
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 5 WDWGGS 10
W WGG+
Sbjct: 585 WIWGGN 590
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 KAHWDW 7
+A WDW
Sbjct: 1979 RAIWDW 1984
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PKAHWDWGG 9
PK W W G
Sbjct: 326 PKQAWCWFG 334
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 3 AHWDWGG 9
A W W G
Sbjct: 232 ATWGWHG 238
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 KAHWDW 7
K H++W
Sbjct: 443 KKHYEW 448
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 KAHWDW 7
K H++W
Sbjct: 443 KKHYEW 448
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 4 HWDWGG 9
H+ WGG
Sbjct: 508 HFKWGG 513
>sp|C_MEASY|PROTEIN C|Measles virus (strain Yamagata-1) (MeV)
Query: 1 PKAHWDWG 8
P AHW G
Sbjct: 16 PSAHWPSG 23
129|SequenceR|650|641|MGFGGPKAHW
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 MGFGGPK 7
MG GGP+
Sbjct: 3532 MGIGGPR 3538
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 MGFGGPK 7
MG GGP+
Sbjct: 3532 MGIGGPR 3538
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 MGFGGPKAHW 10
MG GG A W
Sbjct: 649 MGAGGSGADW 658
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 MGFGGPKAHW 10
MG GG A W
Sbjct: 649 MGAGGSGADW 658
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 MGFGGPKAHW 10
MG GG A W
Sbjct: 649 MGAGGSGADW 658
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 1 MGFGGPKAHW 10
MG GG A W
Sbjct: 644 MGAGGSGADW 653
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 FGGPKAH 9
GGPK+H
Sbjct: 1036 LGGPKSH 1042
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 FGGPKAH 9
GGPK+H
Sbjct: 1035 LGGPKSH 1041
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 GFGGPKAHW 10
G GP++H+
Sbjct: 1025 GLAGPRSHY 1033
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 GFGGPKAHW 10
G GG HW
Sbjct: 2369 GIGGAMLHW 2377
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 GFGGPKAH 9
G GGP +H
Sbjct: 1009 GIGGPVSH 1016
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 GFGGPKAHW 10
G G P+AH+
Sbjct: 673 GTGEPRAHY 681
Query: 4 GGPKAHW 10
GG + HW
Sbjct: 513 GGAEGHW 519
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 GFGGP 6
GFGGP
Sbjct: 1183 GFGGP 1187
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 GFGGP 6
GFGGP
Sbjct: 1183 GFGGP 1187
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 GFGGP 6
GFGGP
Sbjct: 1183 GFGGP 1187
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 GFGGP 6
GFGGP
Sbjct: 1183 GFGGP 1187
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GFGGPKAHW 10
GF G A+W
Sbjct: 488 GFFGALAYW 496
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GFGGPKAHW 10
GF G A+W
Sbjct: 503 GFFGALAYW 511
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 GFGGPKA 8
GF GP A
Sbjct: 1507 GFAGPYA 1513
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 4 GGPKAHW 10
G P +HW
Sbjct: 50 GAPGSHW 56
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 FGGPKAH 9
F GPK H
Sbjct: 2052 FDGPKEH 2058
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 GFG--GPKAHW 10
G+G GP HW
Sbjct: 539 GYGPRGPIRHW 549
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 MGFGGPKAHW 10
M +GG A W
Sbjct: 36 MLYGGDLAEW 45
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 MGFGGPKAHW 10
M +GG A W
Sbjct: 54 MLYGGDLAEW 63
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 2 GFGGPKAHW 10
GF K HW
Sbjct: 134 GFEQLKTHW 142
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 1 MGFGGPKA 8
+G GGP A
Sbjct: 299 LGLGGPGA 306
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 1 MGFGGPKAH 9
M FG P H
Sbjct: 412 MSFGDPLFH 420
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 1 MGFGGPKAH 9
M FG P H
Sbjct: 412 MSFGDPLFH 420
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 1 MGFGGPKA 8
+G GGP A
Sbjct: 299 LGLGGPGA 306
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 GFGGPKAHW 10
G GG HW
Sbjct: 2369 GVGGAMLHW 2377
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 GFGGPKAHW 10
G GG HW
Sbjct: 2369 GVGGAMLHW 2377
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 FGGPKA 8
F GPKA
Sbjct: 311 FSGPKA 316
>sp|UL21_HCMVA|UNCHARACTERIZED protein UL21|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GFGGPKAHW 10
G GP A W
Sbjct: 87 GLAGPCAAW 95
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 3 FGGPKA 8
F GPKA
Sbjct: 308 FSGPKA 313
>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 MGFGGP 6
+ FGGP
Sbjct: 104 LSFGGP 109
>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 MGFGGP 6
+ FGGP
Sbjct: 104 LSFGGP 109
130|SequenceR|655|646|ASKSGMGFGG
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 1 ASKSGMGF 8
ASKSG+G
Sbjct: 242 ASKSGVGL 249
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ASKSGMGFG 9
S SG+ FG
Sbjct: 96 GSASGLAFG 104
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ASKSGMGFG 9
S SG+ FG
Sbjct: 96 GSASGLAFG 104
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 4 SGMGFGG 10
SG+ FGG
Sbjct: 509 SGLMFGG 515
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 SGMGFGG 10
SG+ FGG
Sbjct: 509 SGLMFGG 515
131|SequenceR|660|651|TPSTAASKSG
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 TPSTAASKSG 10
TP +AA+K+G
Sbjct: 1252 TPGSAATKNG 1261
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 PSTAASK 8
P+T+ASK
Sbjct: 3725 PATSASK 3731
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 PSTAASK 8
P+T+ASK
Sbjct: 3725 PATSASK 3731
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 PSTAASKS 9
P TA SKS
Sbjct: 356 PRTAGSKS 363
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 PSTAASKS 9
P TA SKS
Sbjct: 350 PRTAGSKS 357
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 PSTAASKS 9
P TA SKS
Sbjct: 349 PRTAGSKS 356
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 PSTAASKSG 10
P TA SK G
Sbjct: 1561 PQTAISKKG 1569
132|SequenceR|665|656|GHSSGTPSTA
>sp|PG114_VARV|CORE protein D2|Variola virus
Query: 3 SSGTPSTA 10
S+GTP+ A
Sbjct: 39 SNGTPTVA 46
>sp|PG114_VAR67|CORE protein D2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 SSGTPSTA 10
S+GTP+ A
Sbjct: 39 SNGTPTVA 46
>sp|PG114_VACCC|CORE protein D2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 SSGTPSTA 10
S+GTP+ A
Sbjct: 39 SNGTPTVA 46
>sp|PG114_MONPV|CORE protein OPG114|Monkeypox virus (MPXV)
Query: 3 SSGTPSTA 10
S+GTP+ A
Sbjct: 39 SNGTPTVA 46
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 HSSGTPST 9
+ GTPST
Sbjct: 2068 QAGGTPST 2075
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 HSSGTPST 9
+ GTPST
Sbjct: 2068 QAGGTPST 2075
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 HSSGTPST 9
+ GTPST
Sbjct: 2068 QAGGTPST 2075
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 HSSGTPSTA 10
HS G P+TA
Sbjct: 727 HSGGPPATA 735
>sp|NEF_HV2BE|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 GHSSGTP 7
GH SG P
Sbjct: 234 GHKSGLP 240
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 GHSSGTPS 8
GHS G P+
Sbjct: 592 GHSVGLPT 599
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 GHSSGTP 7
GH SG P
Sbjct: 234 GHKSGLP 240
>sp|NEF_HV2CA|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 GHSSGTP 7
GH SG P
Sbjct: 238 GHKSGLP 244
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 4 SGTPSTA 10
SGTPST
Sbjct: 808 SGTPSTV 814
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 SGTPSTA 10
SGTPST
Sbjct: 809 SGTPSTV 815
133|SequenceR|670|661|QHTPTGHSSG
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 3 TPTGHSSG 10
+PTG SSG
Sbjct: 649 SPTGTSSG 656
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 3 TPTGHSSG 10
+PTG SSG
Sbjct: 649 SPTGTSSG 656
>sp|VP2_POVKI|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 350)
Query: 2 HTPTGHSSG 10
+TPTG +SG
Sbjct: 106 NTPTGSASG 114
>sp|VP2_POVK6|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 60)
Query: 2 HTPTGHSSG 10
+TPTG +SG
Sbjct: 106 NTPTGSASG 114
>sp|VP2_POVK3|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 380)
Query: 2 HTPTGHSSG 10
+TPTG +SG
Sbjct: 106 NTPTGSASG 114
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 3 TPTGHSSG 10
TPTGH G
Sbjct: 444 TPTGHGLG 451
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 HTPTGHSSG 10
TPT H+SG
Sbjct: 424 QTPTTHTSG 432
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 TPTGHSSG 10
TP G SSG
Sbjct: 458 TPNGSSSG 465
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 TPTGHSSG 10
TP G SSG
Sbjct: 457 TPIGSSSG 464
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 TPTGHSSG 10
TP G SSG
Sbjct: 459 TPIGSSSG 466
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QHTPTGHSS 9
Q PTGHS+
Sbjct: 683 QPRPTGHST 691
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 QHTPTGHS 8
+H+P+GH+
Sbjct: 294 RHSPSGHA 301
>sp|NP04_HHV11|NUCLEAR protein UL4|Human herpesvirus 1 (strain 17)
Query: 1 QHTPTG 6
QHTP G
Sbjct: 59 QHTPIG 64
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 PTGHSSG 10
PTGH+ G
Sbjct: 1172 PTGHAVG 1178
>sp|MATRX_MEASB|MATRIX protein|Measles virus (strain Biken) (MeV)
Query: 4 PTGHSSG 10
PT HS G
Sbjct: 23 PTTHSEG 29
>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 QHTPTGHSSG 10
Q TP SSG
Sbjct: 315 QMTPANMSSG 324
>sp|NP04_HHV2H|NUCLEAR protein UL4|Human herpesvirus 2 (strain HG52)
Query: 1 QHTPTG 6
QHTP G
Sbjct: 59 QHTPIG 64
>sp|VP40_EBORE|MATRIX protein VP40|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 HTPTGHSSG 10
HTP+G +S
Sbjct: 64 HTPSGVASA 72
>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QHTPTGHSSG 10
Q TP SSG
Sbjct: 315 QMTPANMSSG 324
>sp|VP40_EBORR|MATRIX protein VP40|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 HTPTGHSSG 10
HTP+G +S
Sbjct: 64 HTPSGVASA 72
134|SequenceR|675|666|TQPKSQHTPT
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 3 PKSQHTPT 10
PKS+ TPT
Sbjct: 268 PKSRSTPT 275
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 1 TQPKSQHTPT 10
+P S+HTP
Sbjct: 44 NEPNSRHTPI 53
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 PKSQHTPT 10
PK+Q TPT
Sbjct: 195 PKNQSTPT 202
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 PKSQHTPT 10
PK+Q PT
Sbjct: 355 PKTQFIPT 362
>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 PKSQHTPT 10
PK+Q TPT
Sbjct: 195 PKNQSTPT 202
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 PKSQHTPT 10
PKS+ TPT
Sbjct: 1710 PKSRSTPT 1717
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 PKSQHTPT 10
PK+Q TPT
Sbjct: 195 PKNQSTPT 202
>sp|HBSAG_HBVC6|SMALL envelope protein|Hepatitis B virus genotype C
Query: 2 QPKSQHTPT 10
P S H+PT
Sbjct: 55 SPTSNHSPT 63
>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D
Query: 3 PKSQHTPT 10
P S H+PT
Sbjct: 219 PTSNHSPT 226
>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D
Query: 3 PKSQHTPT 10
P S H+PT
Sbjct: 219 PTSNHSPT 226
>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D
Query: 3 PKSQHTPT 10
P S H+PT
Sbjct: 219 PTSNHSPT 226
>sp|HBSAG_HBVA4|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 3 PKSQHTPT 10
P S H+PT
Sbjct: 230 PTSNHSPT 237
>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D
Query: 3 PKSQHTPT 10
P S H+PT
Sbjct: 219 PTSNHSPT 226
135|SequenceR|680|671|AFPDLTQPKS
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 4 DLTQPKS 10
+LT+PKS
Sbjct: 1212 NLTEPKS 1218
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 4 DLTQPKS 10
+LT+PKS
Sbjct: 1208 NLTEPKS 1214
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 AFPDLTQP 8
PDLT+P
Sbjct: 1015 GLPDLTKP 1022
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 AFPDLTQP 8
PDLT+P
Sbjct: 1015 GLPDLTKP 1022
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 AFPDLTQP 8
PDLT+P
Sbjct: 1015 GLPDLTKP 1022
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 3 PDLTQPKS 10
PD+T P S
Sbjct: 504 PDMTSPTS 511
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PDLTQPKS 10
PD+T P S
Sbjct: 504 PDMTSPTS 511
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 3 PDLTQPK 9
PD QPK
Sbjct: 440 PDAVQPK 446
136|SequenceR|685|676|LTGLDAFPDL
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 LTGLDAFPDL 10
LTGL PDL
Sbjct: 2117 LTGLGGVPDL 2126
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 5 DAFPD 9
DAFPD
Sbjct: 1826 DAFPD 1830
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 5 DAFPD 9
DAFPD
Sbjct: 1826 DAFPD 1830
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 5 DAFPD 9
DAFPD
Sbjct: 1822 DAFPD 1826
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 LTGLDAFPDL 10
LTG+ P+L
Sbjct: 2116 LTGMSGVPEL 2125
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 LTGLDAFPDL 10
LTG+ P+L
Sbjct: 2116 LTGMSGVPEL 2125
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 LTGLDAFPDL 10
LTG+ P+L
Sbjct: 2116 LTGMSGVPEL 2125
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 LTGLDAFPDL 10
LTG+ P+L
Sbjct: 2116 LTGMSGVPEL 2125
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 LTGLDAFPDL 10
LTG+ P+L
Sbjct: 2116 LTGMSGVPEL 2125
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 4 LDAFPD 9
LD++PD
Sbjct: 122 LDSYPD 127
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 4 LDAFP 8
LDAFP
Sbjct: 1244 LDAFP 1248
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 LTGLDAF 7
L+GLD F
Sbjct: 1993 LSGLDTF 1999
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 DAFPDL 10
D FPDL
Sbjct: 913 DEFPDL 918
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 DAFPDL 10
D FPDL
Sbjct: 932 DEFPDL 937
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 DAFPDL 10
D FPDL
Sbjct: 923 DEFPDL 928
137|SequenceR|690|681|FSSSGLTGLD
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 SSGLTGL 9
+SGLTGL
Sbjct: 2295 ASGLTGL 2301
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 SSGLTGL 9
+SGLTGL
Sbjct: 2295 ASGLTGL 2301
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 SSGLTGL 9
+SGLTGL
Sbjct: 2295 ASGLTGL 2301
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 2 SSSGLTGL 9
SSSGLT L
Sbjct: 211 SSSGLTEL 218
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 FSSSGLTGLD 10
FS+ G+ GL+
Sbjct: 768 FSNKGIYGLN 777
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 SSSGLTG 8
S+SG+TG
Sbjct: 2356 STSGITG 2362
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 SSSGLTG 8
S+SG+TG
Sbjct: 2356 STSGITG 2362
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 SSSGLTG 8
S+SG+TG
Sbjct: 2356 STSGITG 2362
138|SequenceR|695|686|TPKSAFSSSG
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 1 TPKSAFSS 8
TP++AFSS
Sbjct: 400 TPENAFSS 407
>sp|X_HBVH1|PROTEIN X|Hepatitis B virus genotype H
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PACAFSSAG 67
>sp|X_HBVH2|PROTEIN X|Hepatitis B virus genotype H
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PACAFSSAG 67
>sp|X_HBVH3|PROTEIN X|Hepatitis B virus genotype H
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PACAFSSAG 67
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 2 PKSAFSSSG 10
P+S+FS +G
Sbjct: 12 PESSFSENG 20
>sp|X_HBVA8|PROTEIN X|Hepatitis B virus genotype A3
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVB8|PROTEIN X|Hepatitis B virus genotype B1
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSTG 67
>sp|X_HBVC9|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVE3|PROTEIN X|Hepatitis B virus genotype E
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVE4|PROTEIN X|Hepatitis B virus genotype E
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVE2|PROTEIN X|Hepatitis B virus genotype E
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVD6|PROTEIN X|Hepatitis B virus genotype D
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVB7|PROTEIN X|Hepatitis B virus genotype B1
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVA4|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVC0|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVE1|PROTEIN X|Hepatitis B virus genotype E
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVA9|PROTEIN X|Hepatitis B virus genotype A3
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVA7|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVA3|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVD3|PROTEIN X|Hepatitis B virus genotype D
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVB6|PROTEIN X|Hepatitis B virus genotype B2
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVD2|PROTEIN X|Hepatitis B virus genotype D
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVD4|PROTEIN X|Hepatitis B virus genotype D
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVB4|PROTEIN X|Hepatitis B virus genotype B/C
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVD7|PROTEIN X|Hepatitis B virus genotype D
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVC2|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVB3|PROTEIN X|Hepatitis B virus genotype B2
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVB1|PROTEIN X|Hepatitis B virus genotype B1
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVA2|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVC7|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVC1|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVC5|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVD5|PROTEIN X|Hepatitis B virus genotype D
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|VE2_HPV35|REGULATORY protein E2|Human papillomavirus 35
Query: 2 PKSAFSSS 9
P+S FSS+
Sbjct: 197 PESVFSST 204
>sp|X_HBVCJ|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 2 PKSAFSSS 9
P+SAF+ S
Sbjct: 413 PRSAFTMS 420
>sp|X_HBVB2|PROTEIN X|Hepatitis B virus genotype B2
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
>sp|X_HBVA6|PROTEIN X|Hepatitis B virus genotype A1
Query: 2 PKSAFSSSG 10
P AFSS+G
Sbjct: 59 PVCAFSSAG 67
139|SequenceR|700|691|LGTPTTPKSA
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 GTPTTP 7
GTPT P
Sbjct: 23 GTPTVP 28
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 GTPTTP 7
GTP TP
Sbjct: 1383 GTPLTP 1388
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 GTPTTP 7
GTP TP
Sbjct: 1383 GTPLTP 1388
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 GTPTTP 7
GTPT P
Sbjct: 23 GTPTVP 28
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 GTPTTP 7
GTPT P
Sbjct: 23 GTPTVP 28
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 GTPTTP 7
GTPT P
Sbjct: 23 GTPTVP 28
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 GTPTTP 7
GTPT P
Sbjct: 23 GTPTVP 28
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GTPTTPKSA 10
G+P TPK+
Sbjct: 107 GSPATPKAG 115
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GTPTTPKSA 10
G+P TPK+
Sbjct: 107 GSPATPKAG 115
>sp|NEF_HV2BE|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 LGTPTTPK 8
+G P TP+
Sbjct: 98 IGVPVTPR 105
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 2 GTPTTPKSA 10
G P T KSA
Sbjct: 432 GPPNTGKSA 440
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 2 GTPTTPKSA 10
G P T KSA
Sbjct: 435 GPPNTGKSA 443
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 2 GTPTTPKSA 10
G P T KSA
Sbjct: 431 GPPNTGKSA 439
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 2 GTPTTPKSA 10
G P T KSA
Sbjct: 433 GPPNTGKSA 441
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 2 GTPTTPKSA 10
G P T KSA
Sbjct: 432 GPPNTGKSA 440
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 2 GTPTTPKSA 10
G P T KSA
Sbjct: 433 GPPNTGKSA 441
>sp|NS1_I78A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 2 GTPTTPK 8
G P TPK
Sbjct: 211 GPPLTPK 217
>sp|NS1_I78A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 2 GTPTTPK 8
G P TPK
Sbjct: 211 GPPLTPK 217
>sp|NS1_I77A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Alaska/6/1977
Query: 2 GTPTTPK 8
G P TPK
Sbjct: 211 GPPLTPK 217
>sp|NEF_HV2KR|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 LGTPTTPK 8
+G P TP+
Sbjct: 98 IGVPVTPR 105
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 1 LGTPTTPKSA 10
LG+ TTP A
Sbjct: 100 LGSLTTPTPA 109
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 LGTPTTP 7
LG PT P
Sbjct: 64 LGPPTAP 70
>sp|NS1_I89A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/352/1989
Query: 2 GTPTTPK 8
G P TPK
Sbjct: 211 GPPLTPK 217
>sp|NS1_I73A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Port
Query: 2 GTPTTPK 8
G P TPK
Sbjct: 211 GPPLTPK 217
>sp|NS1_I80A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 2 GTPTTPK 8
G P TPK
Sbjct: 211 GPPLTPK 217
>sp|NS1_I83A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 2 GTPTTPK 8
G P TPK
Sbjct: 211 GPPLTPK 217
>sp|NEF_HV2G1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 LGTPTTPK 8
+G P TP+
Sbjct: 98 VGVPVTPR 105
>sp|US34_HCMVM|PROTEIN US34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GTPTTPKSA 10
G +TPKSA
Sbjct: 116 GPLSTPKSA 124
>sp|NEF_HV2CA|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 LGTPTTPK 8
+G P TP+
Sbjct: 98 VGVPATPR 105
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 3 TPTTP 7
TPTTP
Sbjct: 253 TPTTP 257
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 TPTTPKSA 10
TPTTP S
Sbjct: 62 TPTTPASG 69
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 LGTPTTPKSA 10
+GTP + KSA
Sbjct: 725 IGTPGSGKSA 734
>sp|NS1_I40A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hickox/1940
Query: 2 GTPTTPK 8
G P TPK
Sbjct: 211 GPPLTPK 217
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 LGTPTTPKSA 10
+GTP + KSA
Sbjct: 725 IGTPGSGKSA 734
140|SequenceR|705|696|PFGGGLGTPT
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 1 PFGGGL 6
PFGGGL
Sbjct: 688 PFGGGL 693
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PFGGGL 6
PFGGGL
Sbjct: 688 PFGGGL 693
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 1 PFGGGL 6
PFGGGL
Sbjct: 688 PFGGGL 693
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 PFGGGLGT 8
PFGGG+ T
Sbjct: 115 PFGGGMTT 122
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 PFGGGLGT 8
PFGGG+ T
Sbjct: 115 PFGGGMTT 122
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 PFGGGLGT 8
PFGGG+ T
Sbjct: 115 PFGGGMTT 122
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 PFGGGLGT 8
P+GGG+ T
Sbjct: 114 PYGGGMTT 121
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 PFGGGLGTPT 10
PFG G+ PT
Sbjct: 729 PFGKGVMKPT 738
>sp|X_HBVD3|PROTEIN X|Hepatitis B virus genotype D
Query: 1 PFGGGLGT 8
PF G LGT
Sbjct: 29 PFSGSLGT 36
>sp|X_HBVA8|PROTEIN X|Hepatitis B virus genotype A3
Query: 1 PFGGGLGT 8
PF G LGT
Sbjct: 29 PFSGPLGT 36
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 PFGGGLGTPT 10
PFG G PT
Sbjct: 730 PFGKGTMKPT 739
>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11
Query: 1 PFGGGLGT 8
P G GLGT
Sbjct: 98 PLGAGLGT 105
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 1 PFGGGLGT 8
P GGG+ T
Sbjct: 115 PLGGGMTT 122
>sp|X_HBVD6|PROTEIN X|Hepatitis B virus genotype D
Query: 1 PFGGGLGT 8
PF G LGT
Sbjct: 29 PFSGPLGT 36
>sp|X_HBVC7|PROTEIN X|Hepatitis B virus genotype C
Query: 1 PFGGGLGT 8
PF G LGT
Sbjct: 29 PFSGPLGT 36
>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain
Query: 2 FGGGLGT 8
FGG +GT
Sbjct: 111 FGGVIGT 117
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 3 GGGLGTP 9
GGG TP
Sbjct: 285 GGGSSTP 291
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 3 GGGLGTP 9
GGG TP
Sbjct: 290 GGGHSTP 296
>sp|X_HBVD2|PROTEIN X|Hepatitis B virus genotype D
Query: 1 PFGGGLGT 8
PF G LGT
Sbjct: 29 PFSGPLGT 36
>sp|TRX2_VZVD|TRIPLEX capsid protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 GLGTPT 10
G+GTPT
Sbjct: 88 GVGTPT 93
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PFGGGL 6
P GGGL
Sbjct: 516 PMGGGL 521
141|SequenceR|710|701|PSSLPPFGGG
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 1 PSSLPPF 7
PSSLPP
Sbjct: 579 PSSLPPL 585
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 6 PFGGG 10
PFGGG
Sbjct: 688 PFGGG 692
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 PFGGG 10
PFGGG
Sbjct: 688 PFGGG 692
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 6 PFGGG 10
PFGGG
Sbjct: 688 PFGGG 692
>sp|U21_HHV6Z|U21 glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 PSSLPPFGGG 10
PS+ P G G
Sbjct: 20 PSTCPALGAG 29
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 5 PPFGGG 10
PPFG G
Sbjct: 998 PPFGAG 1003
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 5 PPFGGG 10
PPFG G
Sbjct: 998 PPFGAG 1003
>sp|DNBI_ADE07|PROBABLE DNA-binding protein|Human adenovirus B serotype 7
Query: 4 LPPFGG 9
LPP GG
Sbjct: 11 LPPVGG 16
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 5 PPFGGG 10
PPFG G
Sbjct: 998 PPFGAG 1003
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 5 PPFGGG 10
PPFG G
Sbjct: 999 PPFGAG 1004
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 5 PPFGGG 10
PPFG G
Sbjct: 999 PPFGAG 1004
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 PPFGGG 10
PPFG G
Sbjct: 999 PPFGAG 1004
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 4 LPPFGGG 10
LPP GG
Sbjct: 325 LPPEGGA 331
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 6 PFGGG 10
PFGGG
Sbjct: 115 PFGGG 119
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 6 PFGGG 10
PFGGG
Sbjct: 115 PFGGG 119
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 6 PFGGG 10
PFGGG
Sbjct: 115 PFGGG 119
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 PSSLPPFG 8
P+S PP G
Sbjct: 21 PASAPPDG 28
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 PSSLPP 6
PSS PP
Sbjct: 1600 PSSSPP 1605
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 PSSLPP 6
PSS PP
Sbjct: 1600 PSSSPP 1605
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 4 LPPFGGG 10
PP+G G
Sbjct: 1004 FPPYGSG 1010
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 1 PSSLPPFGG 9
PSS P GG
Sbjct: 270 PSSGVPVGG 278
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 3 SLPPFGGG 10
SLPP GG
Sbjct: 323 SLPPAAGG 330
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 2 SSLPPFGGG 10
SS PP G G
Sbjct: 200 SSSPPTGDG 208
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 4 LPPFGGG 10
PP+G G
Sbjct: 1005 FPPYGSG 1011
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 4 LPPFGGG 10
PP+G G
Sbjct: 1004 FPPYGSG 1010
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 4 LPPFGGG 10
PP+G G
Sbjct: 1005 FPPYGSG 1011
142|SequenceR|715|706|PSAKQPSSLP
>sp|YHL4_HCMVA|UNCHARACTERIZED protein HHLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PSAKQPS 7
P+AKQP+
Sbjct: 28 PAAKQPA 34
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 KQPSSLP 10
KQP+ LP
Sbjct: 145 KQPTGLP 151
143|SequenceR|720|711|GGMPQPSAKQ
>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GGMPQPSA 8
GG+P P++
Sbjct: 325 GGLPNPTS 332
>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GGMPQPSA 8
GG+P P++
Sbjct: 321 GGLPNPTS 328
>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)
Query: 1 GGMPQPSA 8
GG+P P++
Sbjct: 325 GGLPNPTS 332
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GGMPQPSA 8
GG P P+A
Sbjct: 971 GGFPLPTA 978
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GGMPQPSA 8
GG P P+A
Sbjct: 971 GGFPLPTA 978
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 GGMPQPSA 8
GG P P A
Sbjct: 948 GGFPLPQA 955
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 GMPQPSAKQ 10
G PQP Q
Sbjct: 2797 GKPQPHTNQ 2805
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GMPQPSAKQ 10
G+PQ AKQ
Sbjct: 1197 GLPQLVAKQ 1205
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 GGMPQPSAKQ 10
G+ QP AKQ
Sbjct: 400 AGLFQPGAKQ 409
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GMPQPSAKQ 10
G+PQ AKQ
Sbjct: 1196 GIPQLVAKQ 1204
144|SequenceR|725|716|GQQWGGGMPQ
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 1 GQQWGGGMP 9
G+ WG G P
Sbjct: 194 GEHWGKGTP 202
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 GQQWGGGMP 9
G+ WG G P
Sbjct: 166 GEHWGKGTP 174
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 1 GQQWGGGMP 9
G+ WG G P
Sbjct: 194 GEHWGKGTP 202
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 1 GQQWGGGMP 9
G+ WG G P
Sbjct: 196 GEHWGKGTP 204
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 1 GQQWGGGMP 9
G+ WG G P
Sbjct: 166 GEHWGKGTP 174
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 1 GQQWGGGMP 9
G+ WG G P
Sbjct: 195 GEHWGKGTP 203
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 GQQWGGGMP 9
G+ WG G P
Sbjct: 166 GEHWGKGSP 174
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 GQQWGGGMP 9
G+ WG G+P
Sbjct: 192 GEYWGQGVP 200
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 GQQWGGGMP 9
G+ WG G P
Sbjct: 167 GEHWGKGSP 175
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 1 GQQWGGGMP 9
G+ WG G P
Sbjct: 163 GEHWGKGKP 171
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 1 GQQWGGGMP 9
G+ WG G P
Sbjct: 164 GEYWGKGTP 172
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 QWGGGM 8
QWGGG+
Sbjct: 2713 QWGGGL 2718
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 QWGGGM 8
QWGGG+
Sbjct: 2713 QWGGGL 2718
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 QWGGGM 8
QWGGG+
Sbjct: 2713 QWGGGL 2718
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 3 QWGGGMPQ 10
QWG PQ
Sbjct: 652 QWGNHKPQ 659
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 QWGGGM 8
QWGGG+
Sbjct: 2712 QWGGGL 2717
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 QWGGGM 8
QWGGG+
Sbjct: 2713 QWGGGL 2718
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 QWGGGM 8
QWGGG+
Sbjct: 2713 QWGGGL 2718
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 QWGGGM 8
QWGGG+
Sbjct: 2713 QWGGGL 2718
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 QWGGGM 8
QWGGG+
Sbjct: 2715 QWGGGL 2720
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 QWGGGM 8
QWGGG+
Sbjct: 2714 QWGGGL 2719
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 QWGGGM 8
QWGGG+
Sbjct: 2715 QWGGGL 2720
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 GQQWGGGMP 9
G+ WG G P
Sbjct: 164 GEYWGMGTP 172
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 1 GQQWGGGMP 9
G+ WG G P
Sbjct: 191 GEHWGTGTP 199
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 1 GQQWGGGMPQ 10
G + GG +P+
Sbjct: 359 GNKMGGKLPE 368
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 1 GQQWGGGMPQ 10
G + GG +P+
Sbjct: 359 GNKMGGKLPE 368
>sp|C_MEASY|PROTEIN C|Measles virus (strain Yamagata-1) (MeV)
Query: 4 WGGGMP 9
WG G+P
Sbjct: 168 WGSGLP 173
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 1 GQQWGGGMPQ 10
GQ GG PQ
Sbjct: 396 GQDQGGRAPQ 405
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 WGGGMP 9
WG G P
Sbjct: 2020 WGNGAP 2025
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 4 WGGGMP 9
WG G P
Sbjct: 1993 WGNGAP 1998
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 4 WGGGMP 9
WG G P
Sbjct: 1998 WGNGAP 2003
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 QWGGGM 8
+WGG +
Sbjct: 98 EWGGSL 103
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 4 WGGG 7
WGGG
Sbjct: 1830 WGGG 1833
145|SequenceR|730|721|WNYAGGQQWG
>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)
Query: 2 NYAGGQQW 9
N +G QQW
Sbjct: 265 NRSGSQQW 272
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 WNYAGGQQW 9
W + G Q+W
Sbjct: 508 WRHGGAQEW 516
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 WNYAGGQQW 9
W + G Q W
Sbjct: 507 WKHEGAQNW 515
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 WNYAGGQQW 9
W + G Q W
Sbjct: 507 WKHEGAQNW 515
>sp|VE2_HPV61|REGULATORY protein E2|Human papillomavirus type 61
Query: 1 WNYAGGQ 7
W++AGGQ
Sbjct: 334 WHWAGGQ 340
>sp|TAT_HV192|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 WNYAGGQ 7
WN+ G Q
Sbjct: 11 WNHPGSQ 17
>sp|Y190_ADE07|UNCHARACTERIZED 19.0 kDa early protein|Human adenovirus B serotype 7
Query: 1 WNYAGGQQW 9
W Y+ Q W
Sbjct: 165 WMYSSPQSW 173
>sp|TAT_HV1MP|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 WNYAGGQ 7
WN+ G Q
Sbjct: 11 WNHPGSQ 17
>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)
Query: 1 WNYAGGQQW 9
WN G +W
Sbjct: 474 WNIWDGMEW 482
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 4 AGGQQW 9
AGG +W
Sbjct: 1630 AGGSEW 1635
>sp|TAT_HV1S2|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 WNYAGGQ 7
WN+ G Q
Sbjct: 11 WNHPGSQ 17
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 WNYAGG 6
W Y GG
Sbjct: 3853 WEYEGG 3858
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 WNYAGG 6
W Y GG
Sbjct: 3853 WEYEGG 3858
>sp|TAT_HV1ET|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 WNYAGGQ 7
WN+ G Q
Sbjct: 11 WNHPGSQ 17
>sp|TAT_HV1S9|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 WNYAGGQ 7
WN+ G Q
Sbjct: 11 WNHPGSQ 17
>sp|TAT_HV190|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 WNYAGGQ 7
WN+ G Q
Sbjct: 11 WNHPGSQ 17
>sp|TAT_HV1YB|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 WNYAGGQ 7
WN+ G Q
Sbjct: 11 WNHPGSQ 17
>sp|TAT_HV19N|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 WNYAGGQ 7
WN+ G Q
Sbjct: 11 WNHPGSQ 17
>sp|TAT_HV1YF|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 WNYAGGQ 7
WN+ G Q
Sbjct: 11 WNHPGSQ 17
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 NYAGGQQWG 10
+Y G WG
Sbjct: 374 SYNGSSAWG 382
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 1 WNYAGGQ 7
W++AGG+
Sbjct: 341 WHWAGGK 347
>sp|TAT_HV1VI|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 WNYAGGQ 7
WN+ G Q
Sbjct: 11 WNHPGSQ 17
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 WNYAGGQQ 8
W Y GQ+
Sbjct: 433 WRYKEGQE 440
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 1 WNYAGGQQWG 10
WN GG G
Sbjct: 346 WNVGGGSGRG 355
>sp|TAT_HV1EL|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 WNYAGGQ 7
WN+ G Q
Sbjct: 11 WNHPGSQ 17
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 5 GGQQW 9
GGQ W
Sbjct: 240 GGQSW 244
>sp|TAT_HV1SE|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 WNYAGGQ 7
WN+ G Q
Sbjct: 11 WNHPGSQ 17
>sp|TAT_HV1V9|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 WNYAGGQ 7
WN+ G Q
Sbjct: 11 WNHPGSQ 17
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 WNYAGGQQW 9
W + G +W
Sbjct: 508 WRHEGAHEW 516
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 WNYAGGQQW 9
WN QQW
Sbjct: 616 WNNMTWQQW 624
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 WNYAGGQQW 9
WN QQW
Sbjct: 620 WNNMTWQQW 628
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 2 NYAGGQQ--WG 10
NY G QQ WG
Sbjct: 791 NYTGNQQSRWG 801
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WNYAGGQQW 9
WN+ G +W
Sbjct: 662 WNWFGITKW 670
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 1 WNYAGG 6
W++AGG
Sbjct: 344 WHWAGG 349
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 NYAGGQQ--WG 10
NY G QQ WG
Sbjct: 791 NYTGNQQSRWG 801
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 2 NYAGGQQ--WG 10
NY G QQ WG
Sbjct: 791 NYTGNQQSRWG 801
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 1 WNYAGGQQW 9
W + G + W
Sbjct: 507 WKHDGAEAW 515
146|SequenceR|735|726|PQPQQWNYAG
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 QQWNYAG 10
QQW Y G
Sbjct: 6182 QQWGYTG 6188
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 QQWNYAG 10
QQW Y G
Sbjct: 6202 QQWGYTG 6208
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 QQWNYAG 10
QQW Y G
Sbjct: 6232 QQWGYTG 6238
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 QQWNYAG 10
QQW Y G
Sbjct: 6153 QQWGYVG 6159
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 QQWNYAG 10
QQW Y G
Sbjct: 5811 QQWGYVG 5817
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 QQWNYAG 10
QQW Y G
Sbjct: 5836 QQWGYVG 5842
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 QQWNYAG 10
QQW Y G
Sbjct: 6144 QQWGYIG 6150
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 2 QPQQW---NYAG 10
+PQQW NY+G
Sbjct: 398 EPQQWSLPNYSG 409
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 PQPQQWN 7
P P++W+
Sbjct: 725 PNPKEWD 731
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 PQPQQWN 7
P P++W+
Sbjct: 725 PNPKEWD 731
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 3 PQQWNY 8
PQ +NY
Sbjct: 193 PQSYNY 198
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 3 PQQWNY 8
PQ +NY
Sbjct: 193 PQSYNY 198
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 4 QQWNYA 9
Q+WN+A
Sbjct: 514 QEWNHA 519
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 2 QPQQWNYA 9
+P+ W YA
Sbjct: 333 EPETWAYA 340
>sp|PAP1_YLDV|POLY(A) polymerase catalytic subunit|Yaba-like disease virus (YLDV)
Query: 1 PQPQQWNY 8
P P +NY
Sbjct: 322 PMPASFNY 329
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 PQPQQW 6
P P QW
Sbjct: 734 PNPTQW 739
>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)
Query: 1 PQPQQW 6
P P QW
Sbjct: 179 PFPDQW 184
>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 1 PQPQQW 6
P P QW
Sbjct: 179 PFPDQW 184
>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 1 PQPQQW 6
P P QW
Sbjct: 179 PFPDQW 184
>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate
Query: 1 PQPQQW 6
P P QW
Sbjct: 179 PFPDQW 184
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 PQQWNY 8
PQ+W++
Sbjct: 1290 PQKWSF 1295
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 PQPQQWN 7
P+P W+
Sbjct: 741 PRPSSWD 747
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 QQWNYAG 10
+ W+Y+G
Sbjct: 1512 KDWSYSG 1518
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 3 PQQWNYAG 10
P++W + G
Sbjct: 92 PEEWQFGG 99
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 QQWNYAG 10
+ W+Y+G
Sbjct: 1512 KDWSYSG 1518
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 PQPQQWN 7
P P++W+
Sbjct: 744 PVPEKWD 750
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 4 QQWNYAG 10
+ WNY G
Sbjct: 2828 RTWNYHG 2834
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 QQWNYAG 10
+ W+Y+G
Sbjct: 1488 RDWSYSG 1494
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 QQWNYAG 10
+ W+Y+G
Sbjct: 1488 RDWSYSG 1494
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 4 QQWNYAG 10
+ WNY G
Sbjct: 2831 RTWNYHG 2837
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 QQWNYAG 10
+ WNY G
Sbjct: 2827 RTWNYHG 2833
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 4 QQWNYAG 10
+ WNY G
Sbjct: 2831 RTWNYHG 2837
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PQQWNYAG 10
P+QW + G
Sbjct: 722 PEQWMFPG 729
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PQQWNYAG 10
P+QW + G
Sbjct: 731 PEQWMFPG 738
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 QQWNYAG 10
+ WNY G
Sbjct: 2823 KTWNYHG 2829
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 4 QQWNYAG 10
+ WNY G
Sbjct: 2825 RTWNYHG 2831
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 2 QPQQWN 7
+P+QW+
Sbjct: 448 EPEQWS 453
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 QQWNYAG 10
+ WNY G
Sbjct: 2823 RTWNYHG 2829
147|SequenceR|740|731|SPQPKPQPQQ
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 1 SPQPKPQPQQ 10
S +P PQP Q
Sbjct: 442 SREPSPQPDQ 451
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 1 SPQPKPQPQ 9
+P P P+PQ
Sbjct: 223 APNPGPRPQ 231
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 1 SPQPKPQPQ 9
+P P P+PQ
Sbjct: 223 APNPGPRPQ 231
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 1 SPQPKPQPQ 9
+P P P+PQ
Sbjct: 223 APNPGPRPQ 231
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 1 SPQPKPQPQ 9
+P P P+PQ
Sbjct: 223 APNPGPRPQ 231
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 1 SPQPKPQPQ 9
+P P P+PQ
Sbjct: 223 APNPGPRPQ 231
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 1 SPQPKPQPQ 9
+P P P+PQ
Sbjct: 223 APNPGPRPQ 231
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 1 SPQPKPQPQ 9
+P P P+PQ
Sbjct: 223 APNPGPRPQ 231
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 1 SPQPKPQPQ 9
+P P P+PQ
Sbjct: 223 APNPGPRPQ 231
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 2 PQPKPQPQ 9
P P P+PQ
Sbjct: 224 PNPGPRPQ 231
Query: 1 SPQPKPQ 7
+P P+PQ
Sbjct: 225 NPGPRPQ 231
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 2 PQPKPQPQ 9
P P P+PQ
Sbjct: 224 PNPGPRPQ 231
Query: 1 SPQPKPQ 7
+P P+PQ
Sbjct: 225 NPGPRPQ 231
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 SPQPKP 6
+PQPKP
Sbjct: 2850 TPQPKP 2855
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 SPQPKP 6
+PQPKP
Sbjct: 2850 TPQPKP 2855
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 SPQPKP 6
+PQPKP
Sbjct: 2850 TPQPKP 2855
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 SPQPKP 6
+PQPKP
Sbjct: 2850 TPQPKP 2855
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 3 QPKPQPQQ 10
QP P P+Q
Sbjct: 48 QPSPPPRQ 55
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 QPKPQPQQ 10
QP P P+Q
Sbjct: 48 QPSPPPRQ 55
>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PQPKPQPQQ 10
P+P+ QP Q
Sbjct: 44 PKPRLQPNQ 52
>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)
Query: 2 PQPKPQPQQ 10
PQP P+Q
Sbjct: 42 PQPNQPPRQ 50
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 QPKPQPQ 9
QPKPQ Q
Sbjct: 598 QPKPQKQ 604
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 SPQPKPQPQQ 10
+P PKP+ Q
Sbjct: 1223 TPPPKPETPQ 1232
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 QPKPQPQQ 10
+P+P+P +
Sbjct: 349 EPRPRPSR 356
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 QPKPQPQQ 10
+P+P+P +
Sbjct: 349 EPRPRPSR 356
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 QPKPQPQQ 10
+P+P+P +
Sbjct: 349 EPRPRPSR 356
>sp|PHOSP_MUMPM|PHOSPHOPROTEIN virus genotype B (strain
Query: 3 QPKPQP 8
QPKPQP
Sbjct: 333 QPKPQP 338
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 2 PQPKPQPQ 9
P+P P+P+
Sbjct: 767 PKPCPEPE 774
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 SPQPKPQP 8
+P+P P P
Sbjct: 270 APEPSPMP 277
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 SPQPKPQP 8
+P+P P P
Sbjct: 270 APEPSPMP 277
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 SPQPKPQP 8
+P+P P P
Sbjct: 270 APEPSPMP 277
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 SPQPKPQP 8
+P+P P P
Sbjct: 270 APEPSPMP 277
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 SPQPKPQP 8
+P+P P P
Sbjct: 270 APEPSPTP 277
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 SPQPKPQP 8
+P+P P P
Sbjct: 270 APEPSPMP 277
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 2 PQPKPQPQ 9
P+P P+P+
Sbjct: 768 PKPCPEPK 775
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 2 PQPKPQPQ 9
P+P P+P+
Sbjct: 767 PKPCPEPE 774
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 3 QPKPQP 8
QPKP P
Sbjct: 229 QPKPSP 234
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 SPQPKPQP 8
+P+P P P
Sbjct: 270 APEPSPMP 277
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 PQPKPQPQ 9
P+P+PQ Q
Sbjct: 30 PRPRPQRQ 37
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 SPQPKPQP 8
+P+P P P
Sbjct: 270 APEPSPMP 277
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 SPQPKPQP 8
+P+P P P
Sbjct: 270 APEPSPMP 277
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 2 PQPKPQPQ 9
P+P P+P+
Sbjct: 768 PKPCPEPK 775
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 SPQPKPQPQQ 10
+P P P+P++
Sbjct: 1743 NPIPPPRPKR 1752
148|SequenceR|745|736|SSHPMSPQPK
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 2 SHPMSPQP 9
SHP P P
Sbjct: 358 SHPRRPWP 365
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 SSHPMSPQ 8
SSH SPQ
Sbjct: 6651 SSHYWSPQ 6658
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 SSHPMSPQ 8
SSH SPQ
Sbjct: 6701 SSHYWSPQ 6708
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 SHPMSPQPK 10
++P+S PK
Sbjct: 4929 AYPLSKHPK 4937
>sp|PG200_VARV|PROTEIN OPG200|Variola virus
Query: 1 SSHPMSPQ 8
S+H SPQ
Sbjct: 6 STHVFSPQ 13
>sp|PG200_VAR67|PROTEIN OPG200|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SSHPMSPQ 8
S+H SPQ
Sbjct: 6 STHVFSPQ 13
>sp|PG200_VACCC|PROTEIN OPG200|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SSHPMSPQ 8
S+H SPQ
Sbjct: 6 STHVFSPQ 13
>sp|PG200_MONPV|PROTEIN OPG200|Monkeypox virus (MPXV)
Query: 1 SSHPMSPQ 8
S+H SPQ
Sbjct: 6 STHVFSPQ 13
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 SSHPMSP 7
S HP SP
Sbjct: 1164 SGHPGSP 1170
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SSHPMSPQPK 10
SS P SP+ +
Sbjct: 928 SSEPTSPRAR 937
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 HPMSPQ 8
HP SPQ
Sbjct: 549 HPHSPQ 554
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 3 HPMSPQP 9
HP P+P
Sbjct: 42 HPNQPEP 48
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 HPMSPQP 9
HP P+P
Sbjct: 42 HPNQPEP 48
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 SSHPMSPQP 9
S HP+S +P
Sbjct: 175 SPHPVSNRP 183
149|SequenceR|750|741|PRNQPSSHPM
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 1 PRNQPSSHPM 10
RN P HP+
Sbjct: 271 ARNNPDRHPL 280
>sp|VP7_ROTGA|OUTER capsid glycoprotein VP7|Rotavirus B (isolate
Query: 5 PSSHP 9
PS+HP
Sbjct: 21 PSTHP 25
>sp|TAT_HV196|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 PRNQPSSHP 9
P NQP S P
Sbjct: 10 PWNQPGSQP 18
>sp|TAT_HV197|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 PRNQPSSHP 9
P NQP S P
Sbjct: 10 PWNQPGSQP 18
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 PRNQPSSHP 9
P + PSS P
Sbjct: 38 PGDNPSSEP 46
>sp|TEG6_VZVO|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 RNQPSSHPM 10
R++PS PM
Sbjct: 81 RDKPSESPM 89
>sp|TEG6_VZVD|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 RNQPSSHPM 10
R++PS PM
Sbjct: 81 RDKPSESPM 89
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 1 PRNQPSSHP 9
PR P S P
Sbjct: 6 PRGSPDSAP 14
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PRNQPSSHP 9
P N+P HP
Sbjct: 315 PYNKPRRHP 323
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PRNQPSSHP 9
P N+P HP
Sbjct: 315 PYNKPRRHP 323
>sp|PG145_MONPV|TRANSCRIPT termination protein OPG145|Monkeypox virus (MPXV)
Query: 1 PRNQPSSHPM 10
P N P +P+
Sbjct: 76 PTNAPKLYPL 85
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 PRNQPSSH 8
P+N SSH
Sbjct: 134 PKNSWSSH 141
>sp|A18_CWPXG|TRANSCRIPT termination protein A18|Cowpox virus (strain GRI-90 /
Query: 1 PRNQPSSHPM 10
P N P +P+
Sbjct: 76 PTNAPKLYPL 85
>sp|A18_CWPXB|TRANSCRIPT termination protein A18|Cowpox virus (strain Brighton Red)
Query: 1 PRNQPSSHPM 10
P N P +P+
Sbjct: 76 PTNAPKLYPL 85
>sp|PG145_VARV|TRANSCRIPT termination protein OPG145|Variola virus
Query: 1 PRNQPSSHPM 10
P N P +P+
Sbjct: 76 PTNAPKLYPL 85
>sp|PG145_VAR67|TRANSCRIPT termination protein OPG145|Variola virus (isolate
Query: 1 PRNQPSSHPM 10
P N P +P+
Sbjct: 76 PTNAPKLYPL 85
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 3 NQPSSH 8
+QPSSH
Sbjct: 384 DQPSSH 389
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 3 NQPSSH 8
+QPSSH
Sbjct: 384 DQPSSH 389
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 3 NQPSSH 8
+QPSSH
Sbjct: 384 DQPSSH 389
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 3 NQPSSH 8
+QPSSH
Sbjct: 384 DQPSSH 389
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 3 NQPSSH 8
+QPSSH
Sbjct: 383 DQPSSH 388
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 3 NQPSSH 8
+QPSSH
Sbjct: 384 DQPSSH 389
>sp|A18_VACCA|TRANSCRIPT termination protein A18|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PRNQPSSHPM 10
P N P +P+
Sbjct: 76 PTNAPKLYPL 85
150|SequenceR|755|746|SVNYNPRNQP
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 5 NPRNQP 10
NPRN+P
Sbjct: 179 NPRNKP 184
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 3 NYNPRNQP 10
NY PR +P
Sbjct: 738 NYKPRREP 745
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 VNYNPRNQP 10
+NY RN P
Sbjct: 162 INYATRNLP 170
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 VNYNPRNQ 9
+ NPRN+
Sbjct: 1526 IGRNPRNE 1533
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 VNYNPRNQ 9
+ NPRN+
Sbjct: 1936 IGRNPRNE 1943
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 VNYNPRNQ 9
+ NPRN+
Sbjct: 1936 IGRNPRNE 1943
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 VNYNPR 7
+ YNPR
Sbjct: 18 IKYNPR 23
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain
Query: 2 VNYNPR 7
+ YNPR
Sbjct: 18 IKYNPR 23
>sp|UL128_HCMVA|UNCHARACTERIZED protein UL128|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SVNYNP 6
S NYNP
Sbjct: 95 SCNYNP 100
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 1 SVNYNPRNQP 10
S +Y P+ QP
Sbjct: 115 SDDYTPQGQP 124
151|SequenceR|760|751|PMASFSVNYN
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 3 ASFSVNY 9
SFSVNY
Sbjct: 888 GSFSVNY 894
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 1 PMASFSVN 8
PM +F+VN
Sbjct: 457 PMTTFTVN 464
>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 PMASFSVN 8
PM +F+VN
Sbjct: 457 PMTTFTVN 464
>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 1 PMASFSVN 8
PM +F+VN
Sbjct: 457 PMTTFTVN 464
>sp|U16_HHV6G|PROTEIN U17/U16|Human herpesvirus 6A (strain GS)
Query: 4 SFSVNYN 10
+FS NYN
Sbjct: 319 TFSNNYN 325
>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 MASFSVN 8
+ASFSVN
Sbjct: 124 LASFSVN 130
>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 MASFSVN 8
+ASFSVN
Sbjct: 124 IASFSVN 130
152|SequenceR|765|756|ENQGGPMASF
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 ENQGGPMAS 9
EN+GGP+ S
Sbjct: 496 ENRGGPVPS 504
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 ENQGGPMAS 9
EN+GGP+ S
Sbjct: 496 ENRGGPVPS 504
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 ENQGGPMAS 9
EN+GGP+ S
Sbjct: 496 ENRGGPVPS 504
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 ENQGGPMAS 9
EN+GGP+ S
Sbjct: 496 ENRGGPVPS 504
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 ENQGGPMAS 9
EN+GGP+ S
Sbjct: 496 ENRGGPVPS 504
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 ENQGGPMAS 9
EN+GGP+ S
Sbjct: 496 ENRGGPVPS 504
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 1 ENQGGPMAS 9
EN+GGP+ S
Sbjct: 497 ENRGGPVPS 505
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 ENQGGPMAS 9
EN+GGP+ S
Sbjct: 496 ENRGGPVPS 504
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 1 ENQGGPMAS 9
EN+GGP+ S
Sbjct: 496 ENRGGPVPS 504
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 ENQGGPMAS 9
EN+GGP+ S
Sbjct: 497 ENRGGPVPS 505
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 ENQGGPMAS 9
EN+GGP S
Sbjct: 496 ENRGGPAPS 504
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 NQGGPMAS 9
N+GGP+ S
Sbjct: 497 NRGGPVPS 504
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 2 NQGGPMAS 9
N GG MAS
Sbjct: 652 NSGGVMAS 659
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 2 NQGGPMAS 9
N GG MAS
Sbjct: 651 NSGGVMAS 658
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 4 GGPMASF 10
GGP A+F
Sbjct: 303 GGPGAAF 309
153|SequenceR|770|761|SGKGRENQGG
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 KGRENQG 9
KGR NQG
Sbjct: 523 KGRANQG 529
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 KGRENQG 9
KGR NQG
Sbjct: 502 KGRANQG 508
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 4 GRENQGG 10
GREN GG
Sbjct: 3016 GRENSGG 3022
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 4 GRENQGG 10
GREN GG
Sbjct: 3020 GRENSGG 3026
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 4 GRENQGG 10
GREN GG
Sbjct: 3020 GRENSGG 3026
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 KGRENQG 9
KG+ NQG
Sbjct: 523 KGKANQG 529
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 KGRENQG 9
KGR N+G
Sbjct: 523 KGRANRG 529
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GKGRENQG 9
G GR+N G
Sbjct: 284 GDGRDNGG 291
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 4 GRENQGG 10
GR+N GG
Sbjct: 3029 GRKNSGG 3035
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 4 GRENQGG 10
GR+N GG
Sbjct: 3026 GRKNSGG 3032
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 4 GRENQGG 10
GR+N GG
Sbjct: 3029 GRKNSGG 3035
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 GRENQGG 10
GR+N GG
Sbjct: 3030 GRKNSGG 3036
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 1 SGKGREN 7
S KGR+N
Sbjct: 283 SNKGRDN 289
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 1 SGKGREN 7
S KGR+N
Sbjct: 283 SNKGRDN 289
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 3 KGRENQG 9
KG+EN G
Sbjct: 543 KGKENVG 549
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 5 RENQGG 10
REN GG
Sbjct: 3000 RENSGG 3005
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 2 GKGRENQGG 10
G G++ GG
Sbjct: 140 GSGKQQDGG 148
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 2 GKGRENQG 9
GKG +N G
Sbjct: 329 GKGTKNAG 336
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 5 RENQGG 10
REN GG
Sbjct: 3031 RENSGG 3036
>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51
Query: 2 GKGRENQGG 10
G G N GG
Sbjct: 266 GSGSTNTGG 274
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 5 RENQGG 10
RE+QGG
Sbjct: 2279 REDQGG 2284
>sp|M21_HMPVC|PROTEIN M2-1|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 SGKGRENQ 8
SG GRE++
Sbjct: 60 SGAGREDR 67
>sp|VE8E2_HPV39|PROTEIN E8^E2C|Human papillomavirus 39
Query: 2 GKGRENQG 9
GKG +N G
Sbjct: 134 GKGTKNAG 141
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 5 RENQGG 10
REN GG
Sbjct: 3007 RENSGG 3012
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 RENQGG 10
REN GG
Sbjct: 3007 RENSGG 3012
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 5 RENQGG 10
REN GG
Sbjct: 3007 RENSGG 3012
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 5 RENQGG 10
REN GG
Sbjct: 3007 RENSGG 3012
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 5 RENQGG 10
REN GG
Sbjct: 3007 RENSGG 3012
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 RENQGG 10
REN GG
Sbjct: 3007 RENSGG 3012
154|SequenceR|775|766|GELNSSGKGR
>sp|VE6_HPV13|PROTEIN E6|Human papillomavirus 13
Query: 2 ELNSSGKGR 10
+LNSS KGR
Sbjct: 128 KLNSSWKGR 136
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 GELNSSGKG 9
G LNS GKG
Sbjct: 726 GALNSLGKG 734
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 GELNSSGKG 9
G LNS GKG
Sbjct: 726 GALNSLGKG 734
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 2 ELNSSGKGR 10
E+N++G+GR
Sbjct: 12 EVNNTGRGR 20
>sp|VE8E2_HPV16|PROTEIN E8^E2C|Human papillomavirus type 16
Query: 3 LNSSGKGR 10
NSS KGR
Sbjct: 83 FNSSHKGR 90
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 3 LNSSGKGR 10
NSS KGR
Sbjct: 271 FNSSHKGR 278
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 GELNSSGKG 9
GEL+S GK
Sbjct: 209 GELSSLGKA 217
>sp|NEC2_HHV6Z|NUCLEAR egress protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 GELNSSGK 8
G+L SSG+
Sbjct: 198 GQLGSSGE 205
155|SequenceR|780|771|AAKQKGELNS
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 3 KQKGEL 8
KQKG+L
Sbjct: 559 KQKGQL 564
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 AAKQKGEL 8
AAK GEL
Sbjct: 704 AAKPNGEL 711
156|SequenceR|785|776|LDEFDAAKQK
>sp|FUS_HRSVR|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 2 DEFDAA 7
DEFDA+
Sbjct: 486 DEFDAS 491
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 2 DEFDAA 7
DEFDA+
Sbjct: 486 DEFDAS 491
>sp|FUS_HRSVA|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 2 DEFDAA 7
DEFDA+
Sbjct: 486 DEFDAS 491
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 2 DEFDAA 7
DEFDA+
Sbjct: 486 DEFDAS 491
>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus
Query: 2 DEFDAA 7
DEFDA+
Sbjct: 486 DEFDAS 491
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1273 DHFDGYKQQ 1281
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1273 DHFDGYKQQ 1281
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1273 DHFDGYKQQ 1281
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1271 DHFDGYKQQ 1279
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1270 DHFDGYKQQ 1278
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1272 DHFDGYKQQ 1280
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1270 DHFDGYKQQ 1278
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1280 DHFDGYKQQ 1288
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1268 DHFDGYKQQ 1276
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1273 DHFDGYKQQ 1281
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1261 DHFDGYKQQ 1269
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1261 DHFDGYKQQ 1269
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1262 DHFDGYKQQ 1270
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1260 DHFDGYKQQ 1268
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1260 DHFDGYKQQ 1268
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1262 DHFDGYKQQ 1270
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1262 DHFDGYKQQ 1270
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1264 DHFDGYKQQ 1272
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1259 DHFDGYKQQ 1267
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1278 DHFDGYKQQ 1286
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1273 DHFDGYKQQ 1281
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 DEFDAAKQK 10
D FD KQ+
Sbjct: 1273 DHFDGYKQQ 1281
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 LDEFDAAKQK 10
L+EF+A Q+
Sbjct: 806 LEEFEAISQE 815
157|SequenceR|790|781|GQGSLLDEFD
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 1 GQGSLLDEFD 10
G G L+DE D
Sbjct: 494 GAGPLMDELD 503
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 2 QGSLLDEFD 10
+ L+DE+D
Sbjct: 476 KNELIDEYD 484
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GQGSLLDE 8
GQG+ L+E
Sbjct: 338 GQGASLEE 345
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GQGSLLDE 8
GQG+ L+E
Sbjct: 338 GQGASLEE 345
>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)
Query: 1 GQGSLLDE 8
G G+L+DE
Sbjct: 246 GGGTLVDE 253
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 QGSLLDEFD 10
+ L+DE+D
Sbjct: 476 RNELIDEYD 484
158|SequenceR|795|786|KHANFGQGSL
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 KHANFGQGSL 10
KH++FG G L
Sbjct: 3608 KHSDFGLGDL 3617
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 KHANFGQGSL 10
KH++FG G L
Sbjct: 3608 KHSDFGLGDL 3617
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 2 HANFGQGSL 10
HAN GQ ++
Sbjct: 301 HANLGQQAM 309
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 2 HANFGQGSL 10
HAN GQ ++
Sbjct: 305 HANLGQQAM 313
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 KHANFGQ 7
KH N GQ
Sbjct: 414 KHMNIGQ 420
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 5 FGQGSL 10
FG+GSL
Sbjct: 398 FGKGSL 403
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 5 FGQGSL 10
FG+GSL
Sbjct: 398 FGKGSL 403
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 5 FGQGSL 10
FG+GSL
Sbjct: 398 FGKGSL 403
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 5 FGQGSL 10
FG+GSL
Sbjct: 393 FGKGSL 398
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 FGQGSL 10
FG+GSL
Sbjct: 388 FGKGSL 393
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 FGQGSL 10
FG+GSL
Sbjct: 388 FGKGSL 393
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 FGQGSL 10
FG+GSL
Sbjct: 388 FGKGSL 393
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 FGQGSL 10
FG+GSL
Sbjct: 388 FGKGSL 393
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 FGQGSL 10
FG+GSL
Sbjct: 388 FGKGSL 393
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 FGQGSL 10
FG+GSL
Sbjct: 388 FGKGSL 393
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 FGQGSL 10
FG+GSL
Sbjct: 388 FGKGSL 393
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 FGQGSL 10
FG+GSL
Sbjct: 388 FGKGSL 393
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 5 FGQGSL 10
FG+GSL
Sbjct: 380 FGKGSL 385
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 KHANFGQGSL 10
KH++FG L
Sbjct: 3583 KHSDFGLDGL 3592
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 KHANFGQGSL 10
KH++FG L
Sbjct: 3583 KHSDFGLDGL 3592
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 1 KHANFGQGSL 10
+ ANFG G +
Sbjct: 348 RGANFGMGGM 357
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 FGQGSL 10
FG+GSL
Sbjct: 388 FGKGSL 393
159|SequenceR|800|791|PGKKDKHANF
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 1 PGKKDKHAN 9
PGK D H N
Sbjct: 91 PGKSDGHLN 99
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 1 PGKKDKHAN 9
PGK D H N
Sbjct: 91 PGKSDGHLN 99
>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)
Query: 2 GKKDKHANF 10
G K KH NF
Sbjct: 218 GMKKKHMNF 226
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 PGKKDKH 7
P +KDKH
Sbjct: 1543 PSEKDKH 1549
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 PGKKDKH 7
P +KDKH
Sbjct: 1543 PSEKDKH 1549
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 5 DKHANF 10
DKH NF
Sbjct: 316 DKHTNF 321
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 5 DKHANF 10
DKH NF
Sbjct: 316 DKHTNF 321
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 5 DKHANF 10
DKH NF
Sbjct: 319 DKHTNF 324
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 5 DKHANF 10
DKH NF
Sbjct: 319 DKHTNF 324
>sp|VIF_HV1AN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 PGKKDKH 7
PG++D+H
Sbjct: 74 PGERDEH 80
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PGKKDKH 7
PGK KH
Sbjct: 1576 PGKNPKH 1582
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PGKKDKH 7
PGK KH
Sbjct: 1576 PGKNPKH 1582
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PGKKDKH 7
PGK KH
Sbjct: 1576 PGKNPKH 1582
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PGKKDKH 7
PGK KH
Sbjct: 1576 PGKNPKH 1582
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PGKKDKH 7
PGK KH
Sbjct: 1576 PGKNPKH 1582
>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus
Query: 3 KKDKHAN 9
KKD H N
Sbjct: 205 KKDTHGN 211
>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 KKDKHAN 9
KKD H N
Sbjct: 205 KKDTHGN 211
>sp|VE6_HPV29|PROTEIN E6|Human papillomavirus 29
Query: 3 KKDKHAN 9
+KDKH N
Sbjct: 113 EKDKHRN 119
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 PGKKDKH 7
PG+K KH
Sbjct: 6079 PGEKFKH 6085
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 PGKKDKH 7
PG+K KH
Sbjct: 6129 PGEKFKH 6135
>sp|VE6_HPV94|PROTEIN E6|Human papillomavirus type 94
Query: 3 KKDKHAN 9
+KD+H N
Sbjct: 113 EKDRHRN 119
>sp|VE6_HPV28|PROTEIN E6|Human papillomavirus 28
Query: 3 KKDKHAN 9
+KD+H N
Sbjct: 111 EKDRHRN 117
>sp|VE6_HPV10|PROTEIN E6|Human papillomavirus type 10
Query: 3 KKDKHAN 9
+KD+H N
Sbjct: 113 EKDRHRN 119
>sp|VE6_HPV03|PROTEIN E6|Human papillomavirus 3
Query: 3 KKDKHAN 9
+KD+H N
Sbjct: 117 EKDRHRN 123
160|SequenceR|805|796|EAITRPGKKD
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 1 EAITRPGKKD 10
E RPG KD
Sbjct: 450 EIAPRPGNKD 459
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 ITRPGKKD 10
+ RPGK+D
Sbjct: 433 VRRPGKRD 440
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 ITRPGKK 9
+TRPGK+
Sbjct: 3102 VTRPGKE 3108
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 4 TRPGKK 9
TRPGK+
Sbjct: 1989 TRPGKQ 1994
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 4 TRPGKK 9
TRPGK+
Sbjct: 1989 TRPGKQ 1994
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 3 ITRPGKKD 10
ITRP K D
Sbjct: 190 ITRPFKSD 197
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 EAITRPGKKD 10
EA+ R GK++
Sbjct: 596 EALVRSGKRE 605
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 4 TRPGKK 9
+RPGKK
Sbjct: 207 SRPGKK 212
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 4 TRPGKK 9
+RPGKK
Sbjct: 207 SRPGKK 212
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 4 TRPGKK 9
+RPGKK
Sbjct: 207 SRPGKK 212
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 4 TRPGKK 9
+RPGKK
Sbjct: 207 SRPGKK 212
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 3 ITRPGKKD 10
+TRP K D
Sbjct: 184 LTRPFKSD 191
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 ITRPGKKD 10
+TR G KD
Sbjct: 441 LTRDGSKD 448
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 AITRPGKK 9
A+T PG+K
Sbjct: 324 AVTCPGRK 331
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 EAITRPGKK 9
EAI GKK
Sbjct: 2037 EAIANEGKK 2045
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 EAITRPGKK 9
EAI GKK
Sbjct: 2037 EAIANEGKK 2045
161|SequenceR|810|801|EEKRMEAITR
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 1 EEKRMEAI 8
EEKR+E I
Sbjct: 655 EEKRLEVI 662
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 EEKRMEAI 8
EEKR+E I
Sbjct: 655 EEKRLEVI 662
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 1 EEKRMEAI 8
E KR+EAI
Sbjct: 378 ENKRVEAI 385
162|SequenceR|815|806|MEKAMEEKRM
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 MEKAMEEKRM 10
ME+A++ KR+
Sbjct: 1726 MERALQGKRV 1735
163|SequenceR|820|811|LKEPDMEKAM
>sp|CVC1_HHV8P|CAPSID vertex component 1|Human herpesvirus 8 type P
Query: 1 LKEPDMEKAM 10
LK+PD++K +
Sbjct: 400 LKQPDVQKTV 409
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 1 LKEPDME 7
L+EPD+E
Sbjct: 320 LQEPDLE 326
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 LKEPDMEKAM 10
+K PDM+ M
Sbjct: 435 IKHPDMDSMM 444
>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)
Query: 1 LKEPDMEKAM 10
L +PD E+A+
Sbjct: 80 LPDPDPERAL 89
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 KEPDMEK 8
K PDM+K
Sbjct: 2794 KAPDMDK 2800
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 LKEPDMEKAM 10
L EP M KA+
Sbjct: 1707 LGEPKMTKAL 1716
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 4 PDMEKAM 10
PD +KAM
Sbjct: 476 PDRKKAM 482
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 LKEPDMEK 8
++EP++EK
Sbjct: 511 IREPNLEK 518
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 1 LKEPDMEK 8
++EP++EK
Sbjct: 511 IREPNLEK 518
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 1 LKEPDMEK 8
++EP++EK
Sbjct: 511 IREPNLEK 518
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 EPDMEKAM 10
+PD++KA+
Sbjct: 945 KPDLDKAL 952
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 EPDMEKAM 10
+PD++KA+
Sbjct: 945 KPDLDKAL 952
164|SequenceR|825|816|WELIKLKEPD
>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WELIKLKEP 9
W+L+K++EP
Sbjct: 320 WDLVKVEEP 328
>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WELIKLKEP 9
W+L+K++EP
Sbjct: 320 WDLVKVEEP 328
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 WELIKLKE 8
WE +KLKE
Sbjct: 1340 WETLKLKE 1347
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 WELIKLKE 8
WE +KLK+
Sbjct: 1349 WETLKLKD 1356
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 WELIKLKE 8
WE +KLK+
Sbjct: 1341 WETLKLKD 1348
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 WELIKLKEP 9
WE+ K+K P
Sbjct: 5464 WEIGKVKPP 5472
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 1 WELIKLKEP 9
WE I KEP
Sbjct: 311 WEKIDRKEP 319
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 2 ELIKLKEPD 10
+L+KL +PD
Sbjct: 622 QLLKLIDPD 630
>sp|PG145_VARV|TRANSCRIPT termination protein OPG145|Variola virus
Query: 2 ELIKLKEP 9
++IKLK P
Sbjct: 99 KMIKLKRP 106
>sp|PG145_VAR67|TRANSCRIPT termination protein OPG145|Variola virus (isolate
Query: 2 ELIKLKEP 9
++IKLK P
Sbjct: 99 KMIKLKRP 106
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WELIKLK 7
WE IKLK
Sbjct: 16 WERIKLK 22
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 WELIKLKEP 9
WE K+K P
Sbjct: 5502 WETGKVKPP 5510
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 WELIKLKEP 9
WE K+K P
Sbjct: 5522 WETGKVKPP 5530
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 WELIKLKEP 9
WE K+K P
Sbjct: 5552 WETGKVKPP 5560
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 WELIKLKE 8
+ LIKLKE
Sbjct: 2167 YSLIKLKE 2174
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WELIKLK 7
WE IKLK
Sbjct: 16 WERIKLK 22
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 WELIKLKEP 9
WE K+K P
Sbjct: 5137 WESGKVKPP 5145
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 1 WELIKLKEP 9
W+ ++ KEP
Sbjct: 312 WDKVERKEP 320
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 WELIKLK 7
WE I+LK
Sbjct: 16 WEQIRLK 22
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 LIKLKEP 9
+IK+K+P
Sbjct: 1156 IIKMKDP 1162
165|SequenceR|830|821|EKGEIWELIK
>sp|NS1_HRSVB|NON-STRUCTURAL protein 1|Human respiratory syncytial virus B
Query: 3 GEIWELIK 10
G IWELI+
Sbjct: 87 GYIWELIE 94
>sp|NS1_HRSV1|NON-STRUCTURAL protein 1|Human respiratory syncytial virus B
Query: 3 GEIWELIK 10
G IWELI+
Sbjct: 87 GYIWELIE 94
>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KGEIWELIK 10
K ++W+L+K
Sbjct: 316 KTDVWDLVK 324
>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KGEIWELIK 10
K ++W+L+K
Sbjct: 316 KTDVWDLVK 324
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 EKGEIWELIK 10
E GEI EL+K
Sbjct: 186 EGGEIHELLK 195
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 EKGEIWELIK 10
E GEI EL+K
Sbjct: 186 EGGEIHELLK 195
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 KGEIWELIK 10
KG+ W++++
Sbjct: 6092 KGQKWDIVR 6100
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 KGEIWELIK 10
KG+ W++++
Sbjct: 6142 KGQKWDIVR 6150
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 1 EKGEIWELIK 10
E GEI EL++
Sbjct: 186 EGGEIHELLR 195
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 1 EKGEIWELIK 10
E GEI EL++
Sbjct: 186 EGGEIHELLR 195
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 EKGEIWELIK 10
E GEI EL++
Sbjct: 186 EGGEIHELLR 195
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 1 EKGEIWELIK 10
E GEI EL++
Sbjct: 186 EGGEIHELLR 195
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 1 EKGEIWELIK 10
E GEI EL++
Sbjct: 186 EGGEIHELLR 195
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 1 EKGEIWELIK 10
E GEI EL++
Sbjct: 186 EGGEIHELLR 195
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 1 EKGEIWELIK 10
E GEI EL++
Sbjct: 186 EGGEIHELLR 195
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 EKGEIWELIK 10
E GEI EL++
Sbjct: 186 EGGEIHELLR 195
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 KGEIWELIK 10
KG+ W++++
Sbjct: 6112 KGQKWDVVR 6120
>sp|RL5A_HCMVM|PROTEIN RL5A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EKGEIWEL 8
E GE+W +
Sbjct: 85 EDGELWRV 92
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 EKGEIWELIK 10
E GEI EL++
Sbjct: 186 EGGEIHELLR 195
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 1 EKGEIWELIK 10
E GEI EL++
Sbjct: 186 EGGEIHELLR 195
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 2 KGEIWEL 8
KGE W++
Sbjct: 190 KGEYWDV 196
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 1 EKGEIWELIK 10
E GEI EL++
Sbjct: 186 EGGEIHELLR 195
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 GEIWEL 8
GE+W L
Sbjct: 343 GEVWPL 348
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GEIWEL 8
GE+W L
Sbjct: 343 GEVWPL 348
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GEIWEL 8
GE+W L
Sbjct: 343 GEVWPL 348
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 2 KGEIWEL 8
KGE W L
Sbjct: 419 KGERWTL 425
166|SequenceR|835|826|ARINREKGEI
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 1 ARINREKGE 9
ARIN +GE
Sbjct: 384 ARINEVEGE 392
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 5 REKGEI 10
REKGE+
Sbjct: 174 REKGEV 179
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 5 REKGEI 10
REKGE+
Sbjct: 174 REKGEV 179
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 5 REKGEI 10
REKGE+
Sbjct: 174 REKGEV 179
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 1 ARINREK 7
AR+NRE+
Sbjct: 508 ARLNREE 514
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 1 ARINREK 7
AR+NRE+
Sbjct: 512 ARLNREE 518
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 ARINREK 7
AR+NRE+
Sbjct: 512 ARLNREE 518
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 RINREK 7
R+NREK
Sbjct: 2893 RLNREK 2898
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 ARINREK 7
AR+NRE+
Sbjct: 512 ARLNREE 518
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 4 NREKGEI 10
N E+GEI
Sbjct: 1728 NEEQGEI 1734
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 4 NREKGEI 10
N E+GEI
Sbjct: 1738 NEEQGEI 1744
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 4 NREKGEI 10
N E+GEI
Sbjct: 1719 NEEQGEI 1725
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 ARINREK 7
AR+NRE+
Sbjct: 501 ARLNREE 507
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 ARINREK 7
AR+NRE+
Sbjct: 501 ARLNREE 507
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 ARINREK 7
AR+NRE+
Sbjct: 512 ARLNREE 518
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 ARINREK 7
AR+NRE+
Sbjct: 501 ARLNREE 507
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 1 ARINREK 7
AR+NRE+
Sbjct: 508 ARLNREE 514
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 ARINREK 7
AR+NRE+
Sbjct: 512 ARLNREE 518
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 1 ARINREK 7
AR+NRE+
Sbjct: 510 ARLNREE 516
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 ARINREK 7
AR+NRE+
Sbjct: 512 ARLNREE 518
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 ARINREK 7
AR+NRE+
Sbjct: 512 ARLNREE 518
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 ARINREK 7
AR+NRE+
Sbjct: 512 ARLNREE 518
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 1 ARINREKGE 9
AR++ KGE
Sbjct: 312 ARVDHVKGE 320
167|SequenceR|840|831|MTSLLARINR
>sp|UL91_HCMVM|PROTEIN UL91|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 MTSLLARINR 10
M SLLA +NR
Sbjct: 1 MNSLLAELNR 10
>sp|UL91_HCMVA|PROTEIN UL91|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 MTSLLARINR 10
M SLLA +NR
Sbjct: 1 MNSLLAELNR 10
>sp|PG030_MONPV|PROTEIN OPG030|Monkeypox virus (MPXV)
Query: 1 MTSLLARINR 10
MTSL+ +NR
Sbjct: 1 MTSLIMDMNR 10
168|SequenceR|845|836|WLVTHMTSLL
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 WLVTHM 6
WL TH+
Sbjct: 2339 WLFTHI 2344
>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 WLVTHMTSLL 10
WL+ + SLL
Sbjct: 250 WLIKNHISLL 259
>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)
Query: 1 WLVTHMTSLL 10
WL+ + SLL
Sbjct: 244 WLIKNHISLL 253
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 WLVTHM 6
WL TH+
Sbjct: 2339 WLFTHI 2344
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 1 WLVTHMTSLL 10
WL+ + SLL
Sbjct: 249 WLIKNHLSLL 258
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 WLVTHMTSLL 10
WL+ + SLL
Sbjct: 249 WLIKNHLSLL 258
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WLVTH 5
WL TH
Sbjct: 70 WLTTH 74
>sp|UNG_EBVB9|URACIL-DNA glycosylase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 WLVTHMTSLL 10
W H+ SLL
Sbjct: 169 WFTDHVISLL 178
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WLVTH 5
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WLVTH 5
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WLVTH 5
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WLVTH 5
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WLVTH 5
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WLVTH 5
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WLVTH 5
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WLVTH 5
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WLVTH 5
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WLVTH 5
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WLVTH 5
WL TH
Sbjct: 91 WLTTH 95
169|SequenceR|850|841|KTEGAWLVTH
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 1 KTEGAWL 7
K +GAWL
Sbjct: 765 KQDGAWL 771
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 TEGAWLVTH 10
+EGAW +++
Sbjct: 1255 SEGAWSISN 1263
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 TEGAWLVT 9
T G WLVT
Sbjct: 207 TLGRWLVT 214
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 TEGAWLVT 9
T G WLVT
Sbjct: 207 TLGRWLVT 214
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 TEGAWLVT 9
T G WLVT
Sbjct: 207 TLGRWLVT 214
>sp|UL20_HCMVA|UNCHARACTERIZED protein UL20|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TEGAWLVTH 10
TEG W VT+
Sbjct: 75 TEGNWSVTN 83
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 2 TEGAWLVTH 10
+ GA+LV H
Sbjct: 229 SNGAYLVKH 237
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 GAWLVTH 10
G W+ TH
Sbjct: 1819 GGWVATH 1825
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 4 GAWLVTH 10
G W+ TH
Sbjct: 1821 GGWVATH 1827
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 GAWLVTH 10
G W+ TH
Sbjct: 1819 GGWVATH 1825
>sp|VP7_ROTGI|OUTER capsid glycoprotein VP7|Rotavirus B (isolate RVB/Rat/United
Query: 1 KTEGAWL 7
K+EG W+
Sbjct: 188 KSEGNWI 194
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 WLVTH 10
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 WLVTH 10
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 WLVTH 10
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 WLVTH 10
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 WLVTH 10
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 WLVTH 10
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 WLVTH 10
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 WLVTH 10
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 WLVTH 10
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 WLVTH 10
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 WLVTH 10
WL TH
Sbjct: 91 WLTTH 95
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 WLVTH 10
WL TH
Sbjct: 70 WLTTH 74
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 6 WLVTH 10
WL TH
Sbjct: 2339 WLFTH 2343
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 6 WLVTH 10
WL TH
Sbjct: 2339 WLFTH 2343
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 2 TEGAWL 7
T+G WL
Sbjct: 121 TKGGWL 126
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 KTEGAWL 7
KTE W+
Sbjct: 809 KTEAEWI 815
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 KTEGAWL 7
KTE W+
Sbjct: 809 KTEAEWI 815
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 KTEGAWLVT 9
+T+G W VT
Sbjct: 348 ETDGLWPVT 356
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 KTEGAWLVT 9
+T+G W VT
Sbjct: 348 ETDGLWPVT 356
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 TEGAW 6
T+GAW
Sbjct: 988 TDGAW 992
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 KTEGAWLVTH 10
KT+G +TH
Sbjct: 911 KTKGPKTITH 920
170|SequenceR|855|846|GVPKWKTEGA
>sp|E3GL_ADE03|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 3
Query: 1 GVPKWKT 7
GVP+W T
Sbjct: 82 GVPQWYT 88
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VPKWKTE 8
VP+W T+
Sbjct: 182 VPRWNTK 188
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VPKWKTE 8
VP+W T+
Sbjct: 188 VPRWNTK 194
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 VPKWKTEG 9
+PK+K EG
Sbjct: 1625 LPKYKIEG 1632
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 VPKWKTEG 9
+PK+K EG
Sbjct: 1625 LPKYKIEG 1632
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 VPKWKTEG 9
+PK+K EG
Sbjct: 1625 LPKYKIEG 1632
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 VPKWKTEG 9
+PK+K EG
Sbjct: 1625 LPKYKIEG 1632
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 VPKWKTEG 9
+PK+K EG
Sbjct: 1625 LPKYKIEG 1632
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GVPKWK 6
GVP WK
Sbjct: 28 GVPTWK 33
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GVPKWK 6
GVP WK
Sbjct: 32 GVPAWK 37
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 3 PKWKTEG 9
P+W+ EG
Sbjct: 65 PRWRAEG 71
>sp|E3GL_ADE1A|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 GVPKWKT 7
GVP+W T
Sbjct: 77 GVPQWYT 83
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 1 GVPKWK 6
G+P+WK
Sbjct: 452 GLPEWK 457
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 37 GVPVWK 42
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|E3GL_ADE35|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 35
Query: 1 GVPKWKT 7
GVP+W T
Sbjct: 77 GVPEWYT 83
>sp|E3GL_ADE1P|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 GVPKWKT 7
GVP+W T
Sbjct: 77 GVPEWYT 83
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 37 GVPVWK 42
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 42 GVPVWK 47
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GVPKWK 6
G+P WK
Sbjct: 30 GIPAWK 35
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 GVPKW 5
G+PKW
Sbjct: 452 GLPKW 456
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 41 GVPVWK 46
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 46 GVPVWK 51
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 37 GVPVWK 42
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GVPKWK 6
G+P WK
Sbjct: 31 GIPAWK 36
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GVPKWK 6
GVP WK
Sbjct: 30 GVPVWK 35
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 4 KWKTEGA 10
KWKT+ A
Sbjct: 115 KWKTDMA 121
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GVPKWK 6
G+P WK
Sbjct: 31 GIPAWK 36
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 41 GVPVWK 46
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 42 GVPVWK 47
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPIWK 45
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 41 GVPVWK 46
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 41 GVPVWK 46
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 41 GVPVWK 46
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 GVPKWKTEG 9
G+P W G
Sbjct: 625 GIPSWNFVG 633
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 41 GVPVWK 46
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 41 GVPVWK 46
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 41 GVPVWK 46
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP WK
Sbjct: 40 GVPVWK 45
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 VPKWKTEG 9
+PK++ EG
Sbjct: 1623 LPKYRIEG 1630
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 VPKWKTEG 9
+PK++ EG
Sbjct: 1624 LPKYRIEG 1631
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 VPKWKTEG 9
+PK++ EG
Sbjct: 1624 LPKYRIEG 1631
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 VPKWKTEG 9
+PK++ EG
Sbjct: 292 LPKYRIEG 299
>sp|POL_HV1Z6|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 WKTEGA 10
WK EGA
Sbjct: 103 WKGEGA 108
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GVPKWK 6
G+P W+
Sbjct: 33 GIPAWR 38
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 KWKTEG 9
K+KTEG
Sbjct: 5957 KFKTEG 5962
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 KWKTEG 9
K+KTEG
Sbjct: 5934 KFKTEG 5939
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP W+
Sbjct: 40 GVPVWR 45
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GVPKWK 6
G+P W+
Sbjct: 31 GIPAWR 36
>sp|NS1_I68A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 2 VPKWKTEG 9
+PK K EG
Sbjct: 106 MPKQKVEG 113
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GVPKWK 6
GVP W+
Sbjct: 30 GVPVWR 35
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GVPKWK 6
G+P W+
Sbjct: 31 GIPAWR 36
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVPKWK 6
GVP W+
Sbjct: 37 GVPVWR 42
>sp|NS1_I69A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/England/878/1969
Query: 2 VPKWKTEG 9
+PK K EG
Sbjct: 106 MPKQKVEG 113
171|SequenceR|860|851|VLDAMGVPKW
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 VLDAMGVPK 9
+LD MG+PK
Sbjct: 1351 LLDRMGLPK 1359
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 3 DAMGVP 8
DA+GVP
Sbjct: 1013 DALGVP 1018
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 VLDAMGVPKW 10
VLDA+ + +W
Sbjct: 947 VLDAVALERW 956
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 1 VLDAMGVPKW 10
VLDA+ + +W
Sbjct: 947 VLDAVALERW 956
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 LDAMGVPKW 10
+DA G KW
Sbjct: 383 VDAKGYFKW 391
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 VLDAMGVPK 9
+ DA+G+P+
Sbjct: 594 IRDAVGLPE 602
172|SequenceR|865|856|VQEPTVLDAM
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 3 EPTVLDAM 10
EPT+ DAM
Sbjct: 385 EPTLADAM 392
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 1 VQEPTVLD 8
V EPTVL+
Sbjct: 195 VDEPTVLE 202
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 VQEPTVLDAM 10
V P VLDA+
Sbjct: 730 VNTPVVLDAL 739
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 VQEPTVLDA 9
+Q P VLDA
Sbjct: 229 LQHPYVLDA 237
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 VQEPTVLDA 9
+Q P VLDA
Sbjct: 229 LQHPYVLDA 237
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 VQEPTVLDAM 10
VQ+ TVL A+
Sbjct: 3956 VQDSTVLQAL 3965
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 VQEPTVLDAM 10
VQ+ TVL A+
Sbjct: 3976 VQDSTVLQAL 3985
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 VQEPTVLDAM 10
VQ+ TVL A+
Sbjct: 4006 VQDSTVLQAL 4015
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 VQEPTVLDAM 10
VQ+ TVL A+
Sbjct: 3956 VQDSTVLQAL 3965
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 VQEPTVLDAM 10
VQ+ TVL A+
Sbjct: 3976 VQDSTVLQAL 3985
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 VQEPTVLDAM 10
VQ+ TVL A+
Sbjct: 4006 VQDSTVLQAL 4015
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 VQEPTVLDA 9
+Q P VLDA
Sbjct: 229 LQHPYVLDA 237
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 1 VQEPTVLDAM 10
+ EP LDA+
Sbjct: 224 MNEPGTLDAL 233
>sp|VE7_HPV63|PROTEIN E7|Human papillomavirus type 63
Query: 2 QEPTVLD 8
+EP+VLD
Sbjct: 15 EEPSVLD 21
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 QEPTVLD 8
+ PTVLD
Sbjct: 95 RNPTVLD 101
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 3 EPTVLD 8
EPTVL+
Sbjct: 415 EPTVLE 420
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 3 EPTVLD 8
EPTVL+
Sbjct: 415 EPTVLE 420
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin)
Query: 1 VQEPTVLD 8
+ EP VLD
Sbjct: 23 IMEPQVLD 30
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169)
Query: 1 VQEPTVLD 8
+ EP VLD
Sbjct: 23 IMEPQVLD 30
>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VQEPTVLDA 9
VQE TVL A
Sbjct: 411 VQECTVLTA 419
>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VQEPTVLDA 9
VQE TVL A
Sbjct: 411 VQECTVLTA 419
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 VQEPTVLD 8
V+ PT++D
Sbjct: 1106 VEAPTIID 1113
173|SequenceR|870|861|RYVKKVQEPT
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 2 YVKKVQEPT 10
Y+K +Q+PT
Sbjct: 229 YLKNLQQPT 237
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 1 RYVKKVQEPT 10
RY +++EPT
Sbjct: 233 RYTFEIEEPT 242
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 1 RYVKKVQEPT 10
RY +++EPT
Sbjct: 233 RYTFEIEEPT 242
>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49
Query: 1 RYVKKVQEPT 10
RY +++EPT
Sbjct: 232 RYTFEIEEPT 241
>sp|VU51_HHV7J|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 7 (strain JI)
Query: 3 VKKVQEPT 10
++K+Q+PT
Sbjct: 282 LRKLQQPT 289
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 RYVKKVQ 7
RYV KVQ
Sbjct: 137 RYVHKVQ 143
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 RYVKKVQ 7
RYV KVQ
Sbjct: 137 RYVHKVQ 143
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 RYVKKVQ 7
RYV KVQ
Sbjct: 137 RYVHKVQ 143
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 RYVKKVQ 7
RYV KVQ
Sbjct: 137 RYVHKVQ 143
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 RYVKKVQ 7
RYV KVQ
Sbjct: 137 RYVHKVQ 143
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 RYVKKVQ 7
RYV KVQ
Sbjct: 137 RYVHKVQ 143
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 VKKVQEP 9
V+K++EP
Sbjct: 1293 VRKIEEP 1299
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 1 RYVKKVQ 7
RYV KVQ
Sbjct: 137 RYVHKVQ 143
>sp|VL2_HPV47|MINOR capsid protein L2|Human papillomavirus 47
Query: 1 RYVKKVQEPT 10
RY +++EPT
Sbjct: 233 RYTFEIEEPT 242
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 1 RYVKKVQ 7
RYV KVQ
Sbjct: 137 RYVHKVQ 143
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 2 YVKKVQEP 9
Y+K V EP
Sbjct: 234 YIKMVSEP 241
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VKKVQEPT 10
V KVQ PT
Sbjct: 3066 VVKVQRPT 3073
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VKKVQEPT 10
V KVQ PT
Sbjct: 3066 VVKVQRPT 3073
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VKKVQEPT 10
V KVQ PT
Sbjct: 3066 VVKVQRPT 3073
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VKKVQEPT 10
V KVQ PT
Sbjct: 3066 VVKVQRPT 3073
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VKKVQEPT 10
V KVQ PT
Sbjct: 3066 VVKVQRPT 3073
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 2 YVKKVQEP 9
Y+K V EP
Sbjct: 234 YLKMVSEP 241
174|SequenceR|875|866|VLVAKRYVKK
>sp|US11_HCMVT|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 2 LVAKRY 7
LVAKRY
Sbjct: 106 LVAKRY 111
>sp|US11_HCMVM|MEMBRANE glycoprotein US11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LVAKRY 7
LVAKRY
Sbjct: 106 LVAKRY 111
>sp|US11_HCMVA|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 LVAKRY 7
LVAKRY
Sbjct: 106 LVAKRY 111
175|SequenceR|880|871|KDPHVVLVAK
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 1 KDPHVVLVAK 10
++PH VLV K
Sbjct: 57 QEPHKVLVPK 66
>sp|NSP3_ROTGA|NON-STRUCTURAL protein 3|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 1 KDPHVVLVAK 10
KD H +LV K
Sbjct: 99 KDGHTILVPK 108
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 KDPHVVL 7
KDP VVL
Sbjct: 462 KDPSVVL 468
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 DPHVV 6
DPHVV
Sbjct: 519 DPHVV 523
>sp|VE8E2_HPV47|PROTEIN E8^E2C|Human papillomavirus 47
Query: 1 KDPHVVLV 8
+DP V+LV
Sbjct: 230 RDPPVILV 237
>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47
Query: 1 KDPHVVLV 8
+DP V+LV
Sbjct: 421 RDPPVILV 428
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 2 DPHVV 6
DPHV+
Sbjct: 169 DPHVI 173
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 2 DPHVV 6
DPHV+
Sbjct: 169 DPHVI 173
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 2 DPHVV 6
DPHV+
Sbjct: 168 DPHVI 172
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 DPHVV 6
DPHV+
Sbjct: 520 DPHVI 524
>sp|VE2_HPV23|REGULATORY protein E2|Human papillomavirus 23
Query: 1 KDPHVVLV 8
KDP V+L+
Sbjct: 346 KDPPVILL 353
>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22
Query: 1 KDPHVVLV 8
KDP V+L+
Sbjct: 351 KDPPVILL 358
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KDPHVV 6
K+PH+V
Sbjct: 161 KEPHIV 166
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KDPHVV 6
K+PH+V
Sbjct: 161 KEPHIV 166
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 1 KDPHVVLVAK 10
+D H VLV K
Sbjct: 57 QDQHKVLVPK 66
>sp|DR3_HHV6U|UNCHARACTERIZED protein DR3|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PHVVLV 8
PH VLV
Sbjct: 77 PHFVLV 82
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 PHVVLVAK 10
PH VL+ K
Sbjct: 1940 PHGVLILK 1947
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 PHVVLVAK 10
PH VL+ K
Sbjct: 1940 PHGVLILK 1947
176|SequenceR|885|876|PQGTAKDPHV
>sp|PG036_VARV|PROTEIN OPG036|Variola virus
Query: 1 PQGTAKDPHV 10
P+G++ DP++
Sbjct: 24 PEGSSMDPNI 33
>sp|PG036_VAR67|PROTEIN OPG036|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PQGTAKDPHV 10
P+G++ DP++
Sbjct: 24 PEGSSMDPNI 33
>sp|PG036_VACCC|PROTEIN OPG036|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PQGTAKDPHV 10
P+G++ DP++
Sbjct: 24 PEGSSMDPNI 33
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 PQGTAKDP 8
P+GT KDP
Sbjct: 290 PEGTPKDP 297
Query: 3 GTAKDP 8
G+AKDP
Sbjct: 256 GSAKDP 261
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 PQGTAKDP 8
P+GT KDP
Sbjct: 290 PEGTPKDP 297
Query: 3 GTAKDP 8
G+AKDP
Sbjct: 256 GSAKDP 261
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 PQGTAKDP 8
P+GT KDP
Sbjct: 283 PEGTPKDP 290
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 PQGTAKDP 8
P+GT KDP
Sbjct: 283 PEGTPKDP 290
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 PQGTAKDP 8
P+GT KDP
Sbjct: 290 PEGTPKDP 297
Query: 3 GTAKDP 8
G+AKDP
Sbjct: 256 GSAKDP 261
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 PQGTAKDP 8
P+GT KDP
Sbjct: 283 PEGTPKDP 290
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 PQGTAKDP 8
P+GT KDP
Sbjct: 290 PEGTPKDP 297
Query: 3 GTAKDP 8
G+AKDP
Sbjct: 256 GSAKDP 261
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 PQGTAKDP 8
P+GT KDP
Sbjct: 290 PEGTPKDP 297
Query: 3 GTAKDP 8
G+AKDP
Sbjct: 256 GSAKDP 261
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 PQGTAKDP 8
P+GT KDP
Sbjct: 283 PEGTPKDP 290
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 PQGTAKDP 8
P+GT KDP
Sbjct: 290 PEGTPKDP 297
Query: 3 GTAKDP 8
G+AKDP
Sbjct: 256 GSAKDP 261
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 PQGTAKDP 8
P+GT KDP
Sbjct: 290 PEGTPKDP 297
Query: 3 GTAKDP 8
G+AKDP
Sbjct: 256 GSAKDP 261
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 PQGTAKDP 8
P+GT KDP
Sbjct: 290 PEGTPKDP 297
Query: 3 GTAKDP 8
G+AKDP
Sbjct: 256 GSAKDP 261
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 PQGTAKDP 8
P+GT KDP
Sbjct: 290 PEGTPKDP 297
Query: 3 GTAKDP 8
G+AKDP
Sbjct: 256 GSAKDP 261
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 1 PQGTAKDP 8
P+GT KDP
Sbjct: 283 PEGTPKDP 290
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 PQGTAKDP 8
P+GT KDP
Sbjct: 290 PEGTPKDP 297
Query: 3 GTAKDP 8
G+AKDP
Sbjct: 256 GSAKDP 261
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 1 PQGTAKDP 8
P+GT KDP
Sbjct: 283 PEGTPKDP 290
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 PQGTAKDPH 9
PQG +PH
Sbjct: 146 PQGVYYEPH 154
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 PQGTAKDPH 9
PQG PH
Sbjct: 146 PQGVMYTPH 154
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 PQGTAKDP 8
P+GT K+P
Sbjct: 296 PEGTPKEP 303
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 1 PQGTAKDP 8
P+GT K+P
Sbjct: 296 PEGTPKEP 303
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 1 PQGTAKDP 8
P+GT K+P
Sbjct: 296 PEGTPKEP 303
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PQGTAKDPH 9
P GT PH
Sbjct: 1355 PPGTVTTPH 1363
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PQGTAKDPH 9
P GT PH
Sbjct: 1355 PPGTVTTPH 1363
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 PQGTAKDPH 9
PQG PH
Sbjct: 146 PQGVLYVPH 154
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 5 AKDPHV 10
A+DPH+
Sbjct: 153 AEDPHL 158
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PQGTAKDPHV 10
P G A DP V
Sbjct: 653 PVGLAVDPWV 662
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 5 AKDPHV 10
A+DPH+
Sbjct: 153 AEDPHL 158
177|SequenceR|890|881|AYQEYPQGTA
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 YQEYPQGTA 10
Y E PQG A
Sbjct: 822 YPETPQGLA 830
Query: 4 EYPQGTA 10
+YP GT+
Sbjct: 1630 DYPTGTS 1636
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 YQEYPQGTA 10
Y E PQG A
Sbjct: 826 YPETPQGLA 834
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 YQEYPQGTA 10
Y E PQG A
Sbjct: 826 YPETPQGLA 834
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 EYPQGTA 10
+YP+GT+
Sbjct: 1632 DYPEGTS 1638
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 YQEYPQ 7
YQEY Q
Sbjct: 3 YQEYQQ 8
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 YQEYPQ 7
YQEY Q
Sbjct: 3 YQEYQQ 8
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 EYPQGTA 10
+YP+GT+
Sbjct: 1633 DYPRGTS 1639
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 EYPQGTA 10
+YP+GT+
Sbjct: 1633 DYPRGTS 1639
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 EYPQGTA 10
+YP+GT+
Sbjct: 1633 DYPRGTS 1639
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 EYPQGTA 10
+YP+GT+
Sbjct: 1633 DYPRGTS 1639
>sp|E306_ADE35|EARLY E3 6.4 kDa protein|Human adenovirus B serotype 35
Query: 3 QEYPQGT 9
QE+P GT
Sbjct: 26 QEFPSGT 32
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 6 PQGTA 10
PQGTA
Sbjct: 580 PQGTA 584
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 EYPQGTA 10
+YP GT+
Sbjct: 1616 DYPSGTS 1622
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 EYPQGTA 10
+YP GT+
Sbjct: 1616 DYPSGTS 1622
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 EYPQGTA 10
+YP GT+
Sbjct: 1616 DYPSGTS 1622
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 EYPQGTA 10
+YP GT+
Sbjct: 1616 DYPSGTS 1622
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 EYPQGTA 10
+YP GT+
Sbjct: 1616 DYPSGTS 1622
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 EYPQGTA 10
+YP GT+
Sbjct: 1616 DYPSGTS 1622
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 EYPQGTA 10
+YP GT+
Sbjct: 1616 DYPSGTS 1622
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 EYPQGTA 10
+YP GT+
Sbjct: 1616 DYPSGTS 1622
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 4 EYPQGTA 10
+YP GT+
Sbjct: 1610 DYPSGTS 1616
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 EYPQGTA 10
+YP GT+
Sbjct: 1616 DYPSGTS 1622
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 2 YQEYP 6
Y+EYP
Sbjct: 200 YREYP 204
>sp|VP1_POVBA|MAJOR capsid protein VP1|BK polyomavirus (strain AS) (BKPyV)
Query: 4 EYPQGT 9
+YPQGT
Sbjct: 172 KYPQGT 177
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AYQEYPQG 8
AY+E+P G
Sbjct: 728 AYREHPLG 735
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AYQEYPQG 8
AY+E+P G
Sbjct: 728 AYREHPLG 735
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 AYQEYPQG 8
AY+E+P G
Sbjct: 728 AYREHPLG 735
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 4 EYPQGTA 10
+YP GT+
Sbjct: 1631 DYPAGTS 1637
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 4 EYPQGTA 10
+YP GT+
Sbjct: 1627 DYPAGTS 1633
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 EYPQGTA 10
+YP GT+
Sbjct: 1627 DYPTGTS 1633
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 4 EYPQGTA 10
+YP GT+
Sbjct: 1631 DYPAGTS 1637
>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15
Query: 2 YQEYPQG 8
Y E PQG
Sbjct: 337 YSETPQG 343
178|SequenceR|895|886|MFIMKAYQEY
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 FIMKAYQEY 10
F K Y EY
Sbjct: 1515 FFQKGYAEY 1523
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 IMKAYQEY 10
++KAY+++
Sbjct: 1528 VLKAYEQH 1535
>sp|E434_ADE12|EARLY E4 34 kDa protein|Human adenovirus A serotype 12
Query: 1 MFIMKAY 7
MFI+K Y
Sbjct: 80 MFILKKY 86
179|SequenceR|900|891|ADNLEMFIMK
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ADNLEMFI 8
ADN MF+
Sbjct: 315 ADNFHMFL 322
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ADNLEMFI 8
ADN MF+
Sbjct: 315 ADNFHMFL 322
>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ADNLEMFIMK 10
AD+LEM + K
Sbjct: 132 ADSLEMLLDK 141
>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ADNLEMFIMK 10
AD+LEM + K
Sbjct: 132 ADSLEMLLDK 141
>sp|C_PI3H4|PROTEIN C|Human parainfluenza 3 virus (strain
Query: 2 DNLEMF 7
DNL+MF
Sbjct: 159 DNLQMF 164
>sp|E434_ADE12|EARLY E4 34 kDa protein|Human adenovirus A serotype 12
Query: 3 NLEMFIMK 10
+ EMFI+K
Sbjct: 77 DYEMFILK 84
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ADNLEMFI 8
ADN MFI
Sbjct: 346 ADNWVMFI 353
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ADNLEMFI 8
ADN MFI
Sbjct: 346 ADNWVMFI 353
180|SequenceR|905|896|EFESWADNLE
>sp|PG061_VACCP|PROTEIN OPG061|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 EFESWADNLE 10
EF++W D ++
Sbjct: 51 EFDTWTDVIQ 60
>sp|PG061_VACCC|PROTEIN OPG061|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EFESWADNLE 10
EF++W D ++
Sbjct: 51 EFDTWKDVIQ 60
>sp|PG061_MONPV|PROTEIN OPG061|Monkeypox virus (MPXV)
Query: 1 EFESWADNLE 10
EF++W D ++
Sbjct: 51 EFDTWKDVIQ 60
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 EFESWAD----NLE 10
EFE+W + NLE
Sbjct: 465 EFEAWLEAQDANLE 478
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 EFESWAD----NLE 10
EFE+W + NLE
Sbjct: 465 EFEAWLEAQDANLE 478
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 FESWADNLE 10
FESW+ ++
Sbjct: 107 FESWSTTMK 115
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 FESWADNLE 10
FESW+ ++
Sbjct: 107 FESWSTTMK 115
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 FESWADNLE 10
FESW+ ++
Sbjct: 107 FESWSTTMK 115
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 EFESWAD 7
EFE+W +
Sbjct: 465 EFEAWLE 471
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 4 SWADNLE 10
+W+DN++
Sbjct: 99 TWSDNID 105
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 1 EFESW 5
E+ESW
Sbjct: 64 EYESW 68
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 2 FESWADNL 9
F+SWA +
Sbjct: 100 FDSWAQTM 107
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 3 ESWADNLE 10
+ WA NLE
Sbjct: 1140 QRWAVNLE 1147
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 2 FESWAD 7
FE W D
Sbjct: 639 FEKWGD 644
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 EFESWADNL 9
EF ADNL
Sbjct: 343 EFNCTADNL 351
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 EFESWADNL 9
EF ADNL
Sbjct: 343 EFNCTADNL 351
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 EFESWADNL 9
EF ADNL
Sbjct: 342 EFNCTADNL 350
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 EFESWADNL 9
EF ADNL
Sbjct: 342 EFNCTADNL 350
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 EFESWADNL 9
EF ADNL
Sbjct: 342 EFNCTADNL 350
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 EFESWADNL 9
EF ADNL
Sbjct: 342 EFNCTADNL 350
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 FESWADNLE 10
F WA NL+
Sbjct: 661 FTVWAINLQ 669
>sp|E434_ADE02|EARLY 4 ORF6 protein|Human adenovirus C serotype 2
Query: 2 FESWA 6
+ESWA
Sbjct: 117 YESWA 121
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 EFESWADN 8
+ E+W DN
Sbjct: 812 DVEAWKDN 819
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 EFESWADN 8
+ E+W DN
Sbjct: 810 DVETWRDN 817
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 1 EFESWA 6
EFE W+
Sbjct: 539 EFEDWS 544
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 1 EFESWA 6
EFE W+
Sbjct: 539 EFEDWS 544
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 4 SWADNLE 10
+WA+N++
Sbjct: 3391 TWAENIQ 3397
181|SequenceR|913|901|YLPKQGQNEFESW
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 KQGQNEFESW 13
K+G +EFE+W
Sbjct: 460 KKGADEFEAW 469
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 KQGQNEFESW 13
K+G EFE+W
Sbjct: 460 KKGDEEFEAW 469
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 KQGQNEFESW 13
K+G EFE+W
Sbjct: 460 KKGAEEFEAW 469
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 YLPKQGQNEFES 12
Y+PKQ NE +S
Sbjct: 1750 YMPKQKSNELKS 1761
Query: 2 LPKQGQNEFESW 13
LP + +F+ W
Sbjct: 697 LPNLARTKFQVW 708
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 2 LPKQGQNEFE 11
+ +QGQ EFE
Sbjct: 425 ITEQGQTEFE 434
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LPKQGQNEFE 11
+ +QGQ EFE
Sbjct: 426 ITEQGQTEFE 435
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 2 LPKQGQNEFESW 13
LP+ +EF +W
Sbjct: 952 LPQALSHEFHNW 963
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 YLPKQGQNEFESW 13
Y P + FE W
Sbjct: 788 YEPANQEEPFEEW 800
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 YLPKQGQN 8
Y PK G N
Sbjct: 66 YFPKSGAN 73
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 YLPKQGQN 8
Y PK G N
Sbjct: 66 YFPKSGAN 73
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 YLPKQGQN 8
Y PK G N
Sbjct: 66 YFPKSGAN 73
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 LPKQGQNEFESW 13
+PK ++E SW
Sbjct: 65 IPKARRSEGRSW 76
>sp|PG122_VACCC|MRNA-DECAPPING protein OPG122|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LPKQGQN 8
+PK+G+N
Sbjct: 127 IPKRGEN 133
>sp|PG122_MONPV|MRNA-DECAPPING protein OPG122|Monkeypox virus (MPXV)
Query: 2 LPKQGQN 8
+PK+G+N
Sbjct: 127 IPKRGEN 133
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 LPKQGQNEFESW 13
+PK ++E SW
Sbjct: 65 IPKARRSEGRSW 76
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 LPKQGQNE 9
LP QG N+
Sbjct: 635 LPDQGDND 642
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 LPKQGQNEFESW 13
+PK Q E +W
Sbjct: 65 IPKARQPEGRAW 76
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 LPKQGQNE 9
LP QG N+
Sbjct: 635 LPDQGDND 642
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 LPKQGQNE 9
LP QG N+
Sbjct: 635 LPDQGDND 642
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 2 LPKQGQNE 9
LP QG N+
Sbjct: 635 LPDQGDND 642
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 LPKQGQNEFESW 13
+PK Q E +W
Sbjct: 65 IPKARQPEGRAW 76
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 LPKQGQNEFESW 13
+PK Q E +W
Sbjct: 65 IPKARQPEGRAW 76
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 2 LPKQGQNEFESW 13
LP++ F SW
Sbjct: 245 LPRRSLKAFFSW 256
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 3 PKQGQN 8
P QGQN
Sbjct: 111 PMQGQN 116
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 4 KQGQNEFESW 13
K+ N F +W
Sbjct: 653 KEDSNSFNNW 662
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 1 YLPKQGQNEFESW 13
Y+PK + +W
Sbjct: 487 YVPKLDNQTYSTW 499
THE END