AUXI_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|SAGKNESDKM

***** No hits found ******


2|SequenceR|15|6|EMDPSSAGKN

>sp|MTRH_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus maripaludis (strain DSM

Query: 2 MDPSSAGK 9
MDPS AGK
Sbjct: 158 MDPSVAGK 165


>sp|AATI_METMA|A-TYPE ATP synthase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EMDPSSA 7
E+DPSSA
Sbjct: 341 ELDPSSA 347


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 1 EMDPSSAGKN 10
++DP+ GKN
Sbjct: 301 DIDPAEIGKN 310


>sp|MTRH_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus maripaludis (strain C5

Query: 2 MDPSSAGK 9
MDPS GK
Sbjct: 158 MDPSVGGK 165


>sp|DNAK_NITMS|CHAPERONE protein DnaK|Nitrosopumilus maritimus (strain SCM1)

Query: 3 DPSSAGKN 10
DPSS KN
Sbjct: 265 DPSSGAKN 272


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 1 EMDPSSAGKN 10
++DP+ GKN
Sbjct: 301 DIDPAEIGKN 310


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 2 MDPSSAGKN 10
+DP + GKN
Sbjct: 447 LDPYNGGKN 455


>sp|GLPK_HALSA|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 EMDPSSA 7
EMDPS A
Sbjct: 483 EMDPSEA 489


>sp|GLPK_HALS3|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 EMDPSSA 7
EMDPS A
Sbjct: 483 EMDPSEA 489




3|SequenceR|20|11|GGYSPEMDPS

>sp|PSB1_KORCO|PROTEASOME subunit beta 1|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GYSPEMD 8
GYSP+MD
Sbjct: 147 GYSPDMD 153


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 2 GYSPEMD 8
GYSPE+D
Sbjct: 417 GYSPELD 423


>sp|RS3A_METJA|SMALL ribosomal subunit protein eS1|Methanocaldococcus jannaschii

Query: 2 GYSPEMDPS 10
GY+P DPS
Sbjct: 40 GYTPANDPS 48


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 2 GYSPEMD 8
GYSPE+D
Sbjct: 450 GYSPELD 456


>sp|GLPK_HALSA|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 YSPEMDPS 10
+ PEMDPS
Sbjct: 480 FEPEMDPS 487


>sp|GLPK_HALS3|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 29341

Query: 3 YSPEMDPS 10
+ PEMDPS
Sbjct: 480 FEPEMDPS 487


>sp|COFH2_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina mazei (strain ATCC

Query: 1 GGYSPEMD 8
GGY+PE D
Sbjct: 108 GGYTPEAD 115


>sp|ILVC_METVS|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus vannielii (strain ATCC

Query: 1 GGYSPEM 7
GYSPEM
Sbjct: 216 AGYSPEM 222


>sp|COFH2_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina acetivorans (strain

Query: 1 GGYSPEMD 8
GGY+PE D
Sbjct: 108 GGYTPEAD 115


>sp|RL22_METAR|LARGE ribosomal subunit protein uL22|Methanocella arvoryzae (strain DSM

Query: 2 GYSPEMDPS 10
GY+ E DP+
Sbjct: 5 GYTAEFDPA 13


>sp|ENO_METBF|ENOLASE barkeri (strain Fusaro /

Query: 1 GGYSPEMDPS 10
GGY+P+M S
Sbjct: 218 GGYAPKMSES 227


>sp|ENO_METAC|ENOLASE acetivorans (strain ATCC 35395

Query: 1 GGYSPEMDPS 10
GGY+P+M S
Sbjct: 219 GGYAPKMSES 228


>sp|PSTB_PYRAB|PHOSPHATE import ATP-binding protein PstB|Pyrococcus abyssi (strain GE5 /

Query: 3 YSPEMDP 9
YSP++DP
Sbjct: 75 YSPDVDP 81


>sp|Y059_ARCFU|UNCHARACTERIZED protein AF_0059|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGYSPEMD 8
GGYS E+D
Sbjct: 18 GGYSYELD 25


>sp|ILVC_METM6|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C6 /

Query: 1 GGYSPEM 7
GY+PEM
Sbjct: 216 AGYAPEM 222


>sp|TRM5B_PYRAB|TRNA (guanine(37)-N(1))-methyltransferase Trm5b|Pyrococcus abyssi

Query: 2 GYSPEMDP 9
G+ PE DP
Sbjct: 278 GFGPEGDP 285


>sp|ILVC_METM7|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C7 /

Query: 1 GGYSPEM 7
GY+PEM
Sbjct: 216 AGYAPEM 222


>sp|ILVC_METM5|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C5 /

Query: 1 GGYSPEM 7
GY+PEM
Sbjct: 216 AGYAPEM 222


>sp|COFH2_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina barkeri (strain Fusaro

Query: 1 GGYSPEMD 8
GGY PE D
Sbjct: 108 GGYIPEAD 115


>sp|ENO_METMA|ENOLASE mazei (strain ATCC BAA-159

Query: 1 GGYSPEMDPS 10
GGY+P+M S
Sbjct: 218 GGYAPKMGES 227


>sp|ILVC_METMP|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain DSM

Query: 1 GGYSPEM 7
GY+PEM
Sbjct: 216 AGYAPEM 222


>sp|RL22_METVS|LARGE ribosomal subunit protein uL22|Methanococcus vannielii (strain

Query: 2 GYSPEMDPS 10
GY E DPS
Sbjct: 5 GYKVEADPS 13


>sp|REG1_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH0045|Pyrococcus horikoshii

Query: 2 GYSPEMDPS 10
GYS +DPS
Sbjct: 52 GYSAVVDPS 60


>sp|T2M2_AERPE|PUTATIVE type II restriction enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 2 GYSPEMDPS 10
G PE+DPS
Sbjct: 109 GGEPELDPS 117


>sp|ILVC_HALWD|KETOL-ACID reductoisomerase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GGYSPEM 7
GYSPEM
Sbjct: 240 AGYSPEM 246


>sp|RADB_THESM|DNA repair and recombination protein|Thermococcus sibiricus (strain

Query: 1 GGYSPE 6
GG+SPE
Sbjct: 55 GGFSPE 60


>sp|RADB_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain

Query: 1 GGYSPE 6
GG+SPE
Sbjct: 66 GGFSPE 71


>sp|RADB_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 1 GGYSPE 6
GG+SPE
Sbjct: 60 GGFSPE 65


>sp|RADB_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 1 GGYSPE 6
GG+SPE
Sbjct: 56 GGFSPE 61


>sp|ILVC_NATPD|KETOL-ACID reductoisomerase (NADP(+))|Natronomonas pharaonis (strain ATCC

Query: 1 GGYSPEM 7
GYSPEM
Sbjct: 218 AGYSPEM 224


>sp|RRP4_KORCO|EXOSOME complex component Rrp4|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GGYSPEMDPS 10
GGY E+DP+
Sbjct: 144 GGYLLEVDPA 153


>sp|RADB_THEON|DNA repair and recombination protein|Thermococcus onnurineus (strain

Query: 1 GGYSPE 6
GG+SPE
Sbjct: 55 GGFSPE 60


>sp|ILVC_METJA|KETOL-ACID reductoisomerase (NADP(+))|Methanocaldococcus jannaschii (strain

Query: 1 GGYSPEM 7
GY+PEM
Sbjct: 217 AGYAPEM 223


>sp|RADB_THEGJ|DNA repair and recombination protein|Thermococcus gammatolerans

Query: 1 GGYSPE 6
GG+SPE
Sbjct: 55 GGFSPE 60


>sp|RADB_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis

Query: 1 GGYSPE 6
GG+SPE
Sbjct: 55 GGFSPE 60


>sp|ILVC_METHJ|KETOL-ACID reductoisomerase (NADP(+))|Methanospirillum hungatei JF-1 (strain

Query: 1 GGYSPEM 7
GY+PEM
Sbjct: 216 AGYAPEM 222


>sp|ILVC_METB6|KETOL-ACID reductoisomerase (NADP(+))|Methanoregula boonei (strain DSM 21154

Query: 1 GGYSPEM 7
GY+PEM
Sbjct: 216 AGYAPEM 222


>sp|LRPA1_HALS3|HTH-TYPE transcriptional regulator LrpA1|Halobacterium salinarum (strain

Query: 2 GYSPEMDP 9
GYS ++DP
Sbjct: 51 GYSADVDP 58


>sp|ILVC_METST|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 1 GGYSPEM 7
GY PEM
Sbjct: 216 AGYKPEM 222


>sp|ILVC_METLZ|KETOL-ACID reductoisomerase (NADP(+))|Methanocorpusculum labreanum (strain

Query: 1 GGYSPEM 7
GY+PEM
Sbjct: 216 AGYAPEM 222


>sp|TOP6B_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GGYSPEMDP 9
G PE+DP
Sbjct: 281 AGLDPEIDP 289


>sp|TRPB_THEGJ|TRYPTOPHAN synthase beta chain|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GGYSPEM 7
GGY+P+M
Sbjct: 310 GGYTPKM 316


>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 1 GGYSPEM 7
GGY+P+M
Sbjct: 310 GGYTPKM 316


>sp|TOP6B_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 2 GYSPEMDP 9
G PE+DP
Sbjct: 282 GLDPEIDP 289


>sp|ILVC_METBF|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 1 GGYSPEM 7
GY PEM
Sbjct: 217 AGYQPEM 223


>sp|TOP6B_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GGYSPEMDP 9
G PE+DP
Sbjct: 281 AGLDPEIDP 289


>sp|PCP_THEON|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus onnurineus (strain NA1)

Query: 2 GYSPEMDP 9
GY+PE +P
Sbjct: 94 GYTPEDEP 101


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 1 GGYSPEM 7
GY+PEM
Sbjct: 216 AGYAPEM 222


>sp|ILVC_METPE|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaerula palustris (strain ATCC

Query: 1 GGYSPEM 7
GY+PEM
Sbjct: 216 AGYAPEM 222


>sp|GPMI_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM

Query: 2 GYSPEMD 8
GYSPE++
Sbjct: 17 GYSPEVE 23


>sp|ILVC_METMA|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina mazei (strain ATCC

Query: 1 GGYSPEM 7
GY PEM
Sbjct: 217 AGYQPEM 223


>sp|ILVC_METAC|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina acetivorans (strain ATCC

Query: 1 GGYSPEM 7
GY PEM
Sbjct: 217 AGYQPEM 223


>sp|GLPK_HALMA|GLYCEROL kinase|Haloarcula marismortui (strain ATCC 43049

Query: 3 YSPEMD 8
+SPEMD
Sbjct: 480 FSPEMD 485


>sp|RTCA_IGNH4|RNA 3'-terminal phosphate cyclase|Ignicoccus hospitalis (strain KIN4/I

Query: 3 YSPEMDP 9
Y PE DP
Sbjct: 228 YPPERDP 234


>sp|F16PA_HALSA|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GGYSPEMDP 9
GGY+ +DP
Sbjct: 80 GGYAVALDP 88


>sp|F16PA_HALS3|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Halobacterium salinarum (strain ATCC 29341

Query: 1 GGYSPEMDP 9
GGY+ +DP
Sbjct: 80 GGYAVALDP 88


>sp|SRP54_HYPBU|SIGNAL recognition particle 54 kDa|Hyperthermus butylicus (strain DSM

Query: 1 GGYSPEMDP 9
G Y PE+ P
Sbjct: 86 GEYEPEVKP 94


>sp|ASPG_THEKO|L-ASPARAGINASE kodakarensis (strain ATCC BAA-918

Query: 3 YSPEMDPS 10
+ PE+DP+
Sbjct: 196 FDPELDPN 203


>sp|COFG_METPE|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GGYSPEMDP 9
G Y P M+P
Sbjct: 305 GWYPPSMEP 313


>sp|ILVC_HALMA|KETOL-ACID reductoisomerase (NADP(+))|Haloarcula marismortui (strain ATCC

Query: 1 GGYSPEM 7
GY+PEM
Sbjct: 221 AGYAPEM 227


>sp|MCRG_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 1 GGYSPE 6
GGY+PE
Sbjct: 244 GGYNPE 249


>sp|ILVC_METBU|KETOL-ACID reductoisomerase (NADP(+))|Methanococcoides burtonii (strain DSM

Query: 1 GGYSPEM 7
GY PEM
Sbjct: 217 AGYQPEM 223




4|SequenceR|25|16|MDFLGGGYSP

>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 FLGGGYS 9
FLGGGY+
Sbjct: 189 FLGGGYA 195


>sp|RBL_METBF|RIBULOSE bisphosphate carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DFLGGGYSP 10
D++ GYSP
Sbjct: 4 DYIDAGYSP 12


>sp|RADB_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis

Query: 3 FLGGGYSP 10
LGGG++P
Sbjct: 12 LLGGGFAP 19


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 3 FLGGGYSP 10
FLGGG P
Sbjct: 74 FLGGGLCP 81


>sp|Y1225_METJA|UNCHARACTERIZED protein MJ1225|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MDFLGGG 7
+DF+GGG
Sbjct: 58 VDFMGGG 64


>sp|PFDA_HALMA|PREFOLDIN subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 4 LGGGYS 9
LGGGYS
Sbjct: 85 LGGGYS 90


>sp|RL37A_THEAC|LARGE ribosomal subunit protein eL43|Thermoplasma acidophilum (strain

Query: 3 FLGGGYSP 10
F GG Y+P
Sbjct: 64 FAGGSYTP 71


>sp|KADA_PYRAE|ADENYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 LGGGYSP 10
+GGGY P
Sbjct: 89 IGGGYYP 95


>sp|RL37A_THEVO|LARGE ribosomal subunit protein eL43|Thermoplasma volcanium (strain

Query: 3 FLGGGYSP 10
F GG Y+P
Sbjct: 64 FAGGAYNP 71


>sp|RL37A_PICTO|LARGE ribosomal subunit protein eL43|Picrophilus torridus (strain ATCC

Query: 3 FLGGGYSP 10
F GG Y+P
Sbjct: 64 FAGGSYNP 71


>sp|RL37A_METKA|LARGE ribosomal subunit protein eL43|Methanopyrus kandleri (strain AV19

Query: 2 DFLGGGYSP 10
+F GG Y P
Sbjct: 62 EFTGGAYYP 70


>sp|ARGB_METAR|ACETYLGLUTAMATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 MDFLGGGYSP 10
MD L GY P
Sbjct: 170 MDLLDKGYIP 179


>sp|CBIA_METM5|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C5 /

Query: 3 FLGGGY 8
+LGGGY
Sbjct: 297 YLGGGY 302


>sp|CBIA_METVS|COBYRINATE a,c-diamide synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 FLGGGY 8
+LGGGY
Sbjct: 297 YLGGGY 302


>sp|GCSPA_SULAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfolobus

Query: 3 FLGGGYSP 10
F+GGG P
Sbjct: 74 FIGGGLCP 81


>sp|CBIA_METM7|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C7 /

Query: 3 FLGGGY 8
+LGGGY
Sbjct: 297 YLGGGY 302


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MDFLGGGYSP 10
++FLGG P
Sbjct: 416 VEFLGGSVKP 425


>sp|THIL_METJA|THIAMINE-MONOPHOSPHATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DFLGGGY 8
+F GGGY
Sbjct: 309 EFYGGGY 315


>sp|RBL_METMA|RIBULOSE bisphosphate carboxylase|Methanosarcina mazei (strain ATCC

Query: 2 DFLGGGYSP 10
D++ GYSP
Sbjct: 4 DYIDIGYSP 12


>sp|SUCD_METS5|SUCCINATE-SEMIALDEHYDE dehydrogenase (acetylating)|Metallosphaera sedula (strain ATCC

Query: 3 FLGGGYS 9
FLGGG++
Sbjct: 132 FLGGGFA 138


>sp|PFDA_NATPD|PREFOLDIN subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 4 LGGGYS 9
LGGGY+
Sbjct: 83 LGGGYA 88


>sp|PFDA_HALSA|PREFOLDIN subunit alpha|Halobacterium salinarum (strain ATCC 700922

Query: 4 LGGGYS 9
LGGGY+
Sbjct: 82 LGGGYA 87


>sp|PFDA_HALS3|PREFOLDIN subunit alpha|Halobacterium salinarum (strain ATCC 29341

Query: 4 LGGGYS 9
LGGGY+
Sbjct: 82 LGGGYA 87


>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 FLGGGY 8
++GGGY
Sbjct: 291 YIGGGY 296


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 FLGGGY 8
++GGGY
Sbjct: 283 YIGGGY 288


>sp|RL37A_NATPD|LARGE ribosomal subunit protein eL43|Natronomonas pharaonis (strain

Query: 3 FLGGGYSP 10
F GG Y P
Sbjct: 59 FTGGAYRP 66


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 LGGGYS 9
LGGGY+
Sbjct: 392 LGGGYA 397


>sp|RL37A_HALMA|LARGE ribosomal subunit protein eL43|Haloarcula marismortui (strain

Query: 3 FLGGGYSP 10
F GG Y P
Sbjct: 64 FTGGSYKP 71


>sp|CBIA_METJA|COBYRINATE a,c-diamide synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 FLGGGY 8
++GGGY
Sbjct: 293 YIGGGY 298


>sp|CBIA_METST|COBYRINATE a,c-diamide synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 FLGGGY 8
++GGGY
Sbjct: 295 YIGGGY 300


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 FLGGGY 8
++GGGY
Sbjct: 285 YIGGGY 290


>sp|APGM_PYRIL|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum islandicum (strain DSM 4184

Query: 5 GGGYSP 10
GGGY P
Sbjct: 229 GGGYMP 234




5|SequenceR|30|21|AGGKVMDFLG

>sp|Y802_METJA|UNCHARACTERIZED protein MJ0802|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KVMDFLG 10
KVMDF+G
Sbjct: 131 KVMDFMG 137


>sp|UBIX_AERPE|FLAVIN prenyltransferase UbiX|Aeropyrum pernix (strain ATCC 700893

Query: 1 AGGKVMDFLG 10
A GKV+D LG
Sbjct: 172 AAGKVLDALG 181


>sp|Y2111_ARCFU|UPF0056 membrane protein AF_2111|Archaeoglobus fulgidus (strain ATCC

Query: 2 GGKVMDFLG 10
GGK++D+ G
Sbjct: 64 GGKILDYFG 72


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGKVMDFL 9
GGK+MD+L
Sbjct: 15 GGKMMDWL 22


>sp|XDH2_HALVD|D-XYLOSE 1-dehydrogenase (NADP(+)) 2|Haloferax volcanii (strain ATCC 29605

Query: 1 AGGKVMD 7
AGG VMD
Sbjct: 167 AGGSVMD 173


>sp|Y1127_METJA|UNCHARACTERIZED protein MJ1127|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AGGKVM 6
AGGKVM
Sbjct: 34 AGGKVM 39


>sp|UBIX_METTH|FLAVIN prenyltransferase UbiX|Methanothermobacter thermautotrophicus

Query: 2 GGKVMDFLG 10
GKV+D LG
Sbjct: 169 AGKVLDVLG 177


>sp|Y1350_METJA|UNCHARACTERIZED protein MJ1350|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGKVMDFLG 10
GG+ DFLG
Sbjct: 142 GGRAKDFLG 150


>sp|HIS6_SULAC|IMIDAZOLE glycerol phosphate synthase subunit|Sulfolobus acidocaldarius

Query: 2 GGKVMDFLG 10
GK+ DFLG
Sbjct: 204 AGKIDDFLG 212


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 GGKVMDFLG 10
GG ++D++G
Sbjct: 691 GGLIVDYIG 699


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina

Query: 2 GGKVMDFL 9
GG VMD L
Sbjct: 38 GGNVMDHL 45


>sp|CETZ3_HALVD|TUBULIN-LIKE protein CetZ3|Haloferax volcanii (strain ATCC 29605

Query: 1 AGGKVMDFL 9
AGGKV+D L
Sbjct: 11 AGGKVVDAL 19




6|SequenceR|35|26|SFLRGAGGKV

>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 3 LRGAGGKV 10
+RG GGKV
Sbjct: 450 MRGEGGKV 457


>sp|SYS_THEVO|SERINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 FLRGAGG 8
FL+G+GG
Sbjct: 140 FLKGSGG 146


>sp|NPD_PYRAB|NAD-DEPENDENT protein deacylase|Pyrococcus abyssi (strain GE5 /

Query: 2 FLRGAGGKV 10
FLRG G+V
Sbjct: 229 FLRGRAGEV 237


>sp|G6PD_HALVD|NAD-DEPENDENT glucose-6-phosphate dehydrogenase|Haloferax volcanii (strain ATCC

Query: 2 FLRGAGGKV 10
L GAGG+V
Sbjct: 6 LLTGAGGRV 14


>sp|NPD_PYRFU|NAD-DEPENDENT protein deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FLRGAGGKV 10
FLRG G+V
Sbjct: 229 FLRGKAGEV 237


>sp|Y676_METJA|PUTATIVE hydrogenase expression/formation protein

Query: 3 LRGAGGKV 10
+ GAGGKV
Sbjct: 6 MHGAGGKV 13


>sp|MTM3_METJA|TYPE II methyltransferase M.MjaIII|Methanocaldococcus jannaschii

Query: 2 FLRGAGGK 9
FL+ AGGK
Sbjct: 6 FLKWAGGK 13


>sp|MOAA_METAC|PROBABLE GTP 3',8-cyclase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FLRGAGGKV 10
F+R GGKV
Sbjct: 196 FIRPYGGKV 204


>sp|DHQS_METPE|3-DEHYDROQUINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 SFLRGAGGKV 10
+ +RGAG KV
Sbjct: 140 AMVRGAGAKV 149


>sp|NURA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 1 SFLRGAGGKV 10
SF+ G G KV
Sbjct: 94 SFIHGRGEKV 103


>sp|FEN_METMJ|FLAP endonuclease 1|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 LRGAGGK 9
+RG GGK
Sbjct: 240 IRGVGGK 246


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 2 FLRGAGGKV 10
++RG GG+V
Sbjct: 284 YVRGLGGEV 292


>sp|IDI2_SACI7|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 SFLRGAGG 8
SFL G+GG
Sbjct: 268 SFLVGSGG 275


>sp|IDI2_SACI6|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 SFLRGAGG 8
SFL G+GG
Sbjct: 268 SFLVGSGG 275


>sp|IDI2_SACI4|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 SFLRGAGG 8
SFL G+GG
Sbjct: 268 SFLVGSGG 275


>sp|IDI2_SACI3|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain M.16.27)

Query: 1 SFLRGAGG 8
SFL G+GG
Sbjct: 268 SFLVGSGG 275


>sp|IDI2_SACI2|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 SFLRGAGG 8
SFL G+GG
Sbjct: 268 SFLVGSGG 275


>sp|IDI2_SACI1|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 SFLRGAGG 8
SFL G+GG
Sbjct: 268 SFLVGSGG 275




7|SequenceR|40|31|NDKLNSFLRG

>sp|SYS2_METMP|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DKLNSFLRG 10
D++N FLRG
Sbjct: 354 DRVNEFLRG 362


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 DKLNSFLRG 10
D++N FLRG
Sbjct: 354 DRVNEFLRG 362


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 DKLNSFLRG 10
D++N FLRG
Sbjct: 354 DRVNEFLRG 362


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 DKLNSFLRG 10
D++N FLRG
Sbjct: 354 DRVNEFLRG 362


>sp|AATB_METS5|A-TYPE ATP synthase subunit B|Metallosphaera sedula (strain ATCC 51363

Query: 2 DKLNSFLRG 10
D LNS LRG
Sbjct: 141 DGLNSLLRG 149


>sp|AATB_SULTO|A-TYPE ATP synthase subunit B|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DKLNSFLRG 10
D LNS LRG
Sbjct: 140 DGLNSLLRG 148


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 2 DKLNSFLRG 10
D+LN+ LRG
Sbjct: 391 DRLNAALRG 399


>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 2 DKLNSFLRG 10
D LN+ LRG
Sbjct: 138 DGLNALLRG 146


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 DKLNSFLRG 10
D LN+ LRG
Sbjct: 138 DGLNALLRG 146


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DKLNSFLRG 10
D LN+ LRG
Sbjct: 138 DGLNALLRG 146


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 2 DKLNSFLRG 10
D LN+ LRG
Sbjct: 138 DGLNALLRG 146


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 2 DKLNSFLRG 10
D LN+ LRG
Sbjct: 138 DGLNALLRG 146


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 DKLNSFLRG 10
D LN+ LRG
Sbjct: 138 DGLNALLRG 146


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 DKLNSFLRG 10
D LN+ LRG
Sbjct: 138 DGLNALLRG 146


>sp|SYW_SULAC|TRYPTOPHAN--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DKLNSFL 8
DKLN+FL
Sbjct: 342 DKLNAFL 348


>sp|SYW_SACS2|TRYPTOPHAN--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DKLNSFL 8
DKLN+FL
Sbjct: 341 DKLNNFL 347


>sp|AATB_STAMF|A-TYPE ATP synthase subunit B|Staphylothermus marinus (strain ATCC 43588

Query: 2 DKLNSFLRG 10
D LNS +RG
Sbjct: 142 DGLNSIVRG 150


>sp|Y1020_METJA|UNCHARACTERIZED protein MJ1020|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NDKLNSFLR 9
N K+N+FL+
Sbjct: 27 NKKVNTFLK 35


>sp|GATA_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanothermobacter thermautotrophicus

Query: 1 NDKLNSFL 8
ND +N+FL
Sbjct: 35 NDDINAFL 42


>sp|RRP4_METBU|EXOSOME complex component Rrp4|Methanococcoides burtonii (strain DSM 6242

Query: 2 DKLNSFLRG 10
DK+ FLRG
Sbjct: 207 DKVGMFLRG 215


>sp|REG1_PYRAB|UNCHARACTERIZED HTH-type transcriptional regulator PYRAB00550|Pyrococcus abyssi

Query: 2 DKLNSFLR 9
D LNSFL+
Sbjct: 117 DSLNSFLK 124


>sp|Y414_METJA|UNCHARACTERIZED protein MJ0414|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NDKLNSFLRG 10
NDK+ S+L G
Sbjct: 382 NDKIISYLNG 391


>sp|PROF1_LOKSG|LOKI profilin-1|Lokiarchaeum sp. (strain GC14_75)

Query: 2 DKLNSFL 8
DKLN FL
Sbjct: 45 DKLNEFL 51


>sp|PGP_THEVO|PHOSPHOGLYCOLATE phosphatase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NDKLNSFL 8
N+K NSFL
Sbjct: 83 NEKTNSFL 90




8|SequenceR|45|36|LTDKLNDKLN

>sp|Y426_ARCFU|UNCHARACTERIZED protein AF_0426|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LTDKLNDKLN 10
L +KLN++LN
Sbjct: 70 LEEKLNEQLN 79


>sp|TFS_METTH|TRANSCRIPTION factor S|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LTDKLNDK 8
+TDKL DK
Sbjct: 28 ITDKLKDK 35


>sp|RIFK_METS3|RIBOFLAVIN kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 DKLNDKLN 10
DKL DKLN
Sbjct: 106 DKLRDKLN 113


>sp|UPPP_METM5|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C5 /

Query: 1 LTDKLNDKL 9
L+DKLN L
Sbjct: 121 LSDKLNQNL 129


>sp|RL10_METST|LARGE ribosomal subunit protein uL10|Methanosphaera stadtmanae (strain

Query: 1 LTDKLNDKLN 10
+ D+LN+KLN
Sbjct: 283 IDDELNEKLN 292


>sp|SYC_META3|CYSTEINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LTDKLNDKL 9
L+DK+ DKL
Sbjct: 452 LSDKIRDKL 460




9|SequenceR|50|41|SSTDKLTDKL

>sp|TOP6A_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 2 STDKLTDK 9
STDKLT++
Sbjct: 301 STDKLTEQ 308


>sp|TOP6A_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 STDKLTDK 9
STDKLT++
Sbjct: 305 STDKLTEQ 312


>sp|TOP6A_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 STDKLTDK 9
STDKLT++
Sbjct: 301 STDKLTEQ 308


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 DKLTDK 9
DKLTDK
Sbjct: 62 DKLTDK 67




10|SequenceR|55|46|SQIVRSSTDK

>sp|GYRA_HALWD|DNA gyrase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 3 IVRSSTDK 10
I+R+STD+
Sbjct: 400 IIRNSTDR 407




11|SequenceR|60|51|TYSTVSQIVR

>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 2 YSTVSQIVR 10
YSTVS+IV+
Sbjct: 437 YSTVSRIVK 445


>sp|MFNA_NATPD|PROBABLE L-aspartate decarboxylase|Natronomonas pharaonis (strain ATCC

Query: 1 TYSTVSQIVR 10
TY TVS++ R
Sbjct: 41 TYETVSKLER 50




12|SequenceR|65|56|DLDGKTYSTV

>sp|BPS2_ACIAM|PROTEIN bps2|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 DLDGKTY 7
DLDG+TY
Sbjct: 67 DLDGRTY 73


>sp|CDPAS_PYRAE|CDP-ARCHAEOL synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 DGKTYSTV 10
DGKTY V
Sbjct: 47 DGKTYEGV 54


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 GKTYSTV 10
GK YSTV
Sbjct: 91 GKVYSTV 97


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LDGKTY 7
+DGKTY
Sbjct: 500 IDGKTY 505


>sp|ARGD_METJA|ACETYLORNITHINE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLDGKTY 7
D+DGK Y
Sbjct: 35 DIDGKKY 41


>sp|DHQS_METLZ|3-DEHYDROQUINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 GKTYSTV 10
GKTYS V
Sbjct: 290 GKTYSVV 296


>sp|DNAG_THEGJ|DNA primase DnaG|Thermococcus gammatolerans (strain DSM 15229

Query: 4 GKTYSTV 10
GKTY T+
Sbjct: 93 GKTYGTI 99


>sp|FER_THEAC|ZINC-CONTAINING ferredoxin|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DLDGKTYST 9
D DGK Y T
Sbjct: 45 DADGKPYPT 53


>sp|DNAG_THEKO|DNA primase DnaG|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GKTYSTV 10
GKTY T+
Sbjct: 92 GKTYGTI 98


>sp|SPEE_SULTO|POLYAMINE aminopropyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LDGKTYSTV 10
LDGK ST+
Sbjct: 49 LDGKIQSTI 57


>sp|DNAG_PYRFU|DNA primase DnaG|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GKTYSTV 10
GKTY T+
Sbjct: 94 GKTYGTI 100


>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GKTYSTV 10
GK YSTV
Sbjct: 92 GKVYSTV 98


>sp|DNAG_THEON|DNA primase DnaG|Thermococcus onnurineus (strain NA1)

Query: 4 GKTYSTV 10
GKTY T+
Sbjct: 94 GKTYGTI 100


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GKTYSTV 10
GK YSTV
Sbjct: 92 GKVYSTV 98


>sp|PYRG_PYRAB|CTP synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 GKTYSTV 10
GK YSTV
Sbjct: 92 GKVYSTV 98


>sp|XERA_THEON|TYROSINE recombinase XerA|Thermococcus onnurineus (strain NA1)

Query: 1 DLDGKTYSTV 10
DL+GK+ +T+
Sbjct: 16 DLEGKSPNTI 25




13|SequenceR|70|61|TVYTFDLDGK

>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 TFDLDGK 10
TFDLDGK
Sbjct: 4 TFDLDGK 10


>sp|Y012_METJA|TNPB-LIKE protein MJ0012|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VYTFDLDGK 10
VYT DL+GK
Sbjct: 192 VYTVDLNGK 200


>sp|COMDE_METAC|SULFOPYRUVATE decarboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TVYTFDLDG 9
TV TFD DG
Sbjct: 262 TVITFDGDG 270


>sp|AMZA_PYRAE|ARCHAEMETZINCIN aerophilum (strain ATCC 51768

Query: 1 TVYTFDLDG 9
TVY D DG
Sbjct: 60 TVYVLDCDG 68


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VYTFDLDGK 10
+Y+ DLDGK
Sbjct: 254 IYSTDLDGK 262


>sp|THYX_SULAC|FLAVIN-DEPENDENT thymidylate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TVYTFDLDG 9
+VYTF ++G
Sbjct: 60 SVYTFSIEG 68


>sp|PURA_THEVO|ADENYLOSUCCINATE synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 YTFDLDGK 10
Y+++LDGK
Sbjct: 351 YSYELDGK 358


>sp|PGK_PICTO|PHOSPHOGLYCERATE kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 TVYTFDLDGK 10
T+ FDLDGK
Sbjct: 7 TMDDFDLDGK 16


>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 2 VYTFDLDGK 10
V+ FD DGK
Sbjct: 273 VFVFDTDGK 281


>sp|THYX_SULTO|FLAVIN-DEPENDENT thymidylate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TVYTFDLDG 9
++YTF ++G
Sbjct: 60 SIYTFSIEG 68


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 1 TVYTFDLDG 9
T+Y DLDG
Sbjct: 636 TLYIGDLDG 644


>sp|MTAD1_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VYTFDLDG 9
VYT LDG
Sbjct: 176 VYTVSLDG 183


>sp|RS6E_NATPD|SMALL ribosomal subunit protein eS6|Natronomonas pharaonis (strain ATCC

Query: 1 TVYTFDLDGK 10
T Y+F++DG+
Sbjct: 14 TAYSFEVDGQ 23


>sp|AGLM_HALVD|UDP-GLUCOSE 6-dehydrogenase AglM|Haloferax volcanii (strain ATCC 29605

Query: 5 FDLDGK 10
FDLDGK
Sbjct: 313 FDLDGK 318


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 2 VYTFDLD 8
VYT D+D
Sbjct: 284 VYTIDMD 290


>sp|Y764_THEAC|UPF0173 metal-dependent hydrolase Ta0764|Thermoplasma acidophilum (strain

Query: 3 YTFDLDG 9
YT D+DG
Sbjct: 165 YTMDVDG 171


>sp|TFE_METST|TRANSCRIPTION factor E|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 YTFDLDGK 10
YTFD D K
Sbjct: 8 YTFDYDSK 15


>sp|CSG1_HALHT|CELL surface glycoprotein 1|Haloarcula hispanica (strain ATCC 33960

Query: 1 TVYTFDLDG 9
TV T D+DG
Sbjct: 717 TVQTLDVDG 725


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YTFDLDG 9
Y FD+DG
Sbjct: 44 YLFDVDG 50


>sp|PRIS_METS3|DNA primase small subunit PriS|Methanobrevibacter smithii (strain

Query: 3 YTFDLDGK 10
Y FD+D K
Sbjct: 91 YIFDVDAK 98


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 YTFDLDGK 10
YT D +GK
Sbjct: 850 YTHDFEGK 857


>sp|GLPK_THEGJ|GLYCEROL kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 TVYTFDLDGK 10
T FD DGK
Sbjct: 84 TTIVFDRDGK 93


>sp|MFNF_METJA|(4- jannaschii (strain ATCC 43067

Query: 2 VYTFDLDG 9
VY FD++G
Sbjct: 89 VYVFDVNG 96


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YTFDLDGK 10
YT D +GK
Sbjct: 848 YTHDFEGK 855


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 YTFDLDGK 10
YT D +GK
Sbjct: 859 YTHDFEGK 866


>sp|Y864_THEVO|UPF0173 metal-dependent hydrolase TV0864|Thermoplasma volcanium (strain

Query: 3 YTFDLDG 9
YT D+DG
Sbjct: 164 YTMDVDG 170


>sp|CHED_ARCFU|PROBABLE chemoreceptor glutamine deamidase CheD|Archaeoglobus fulgidus

Query: 1 TVYTFDLDGK 10
TVY F DG+
Sbjct: 135 TVYFFTNDGR 144


>sp|Y1222_METJA|UNCHARACTERIZED protein MJ1222|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VYTFDLDGK 10
+ TFD DG+
Sbjct: 97 IITFDADGQ 105




14|SequenceR|75|66|VIIRSTVYTF

***** No hits found ******


15|SequenceR|80|71|LPFSMVIIRS

***** No hits found ******


16|SequenceR|85|76|IDVNDLPFSM

>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IDVNDLPFSM 10
+ VNDLP SM
Sbjct: 471 VGVNDLPLSM 480


>sp|HCP_METMA|HYDROXYLAMINE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DVNDLPFS 9
D+NDLP S
Sbjct: 469 DINDLPIS 476


>sp|RPO6_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo6|Sulfurisphaera tokodaii (strain DSM

Query: 1 IDVNDLPFS 9
ID N+LPF+
Sbjct: 39 IDTNNLPFN 47


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IDVNDLPFSM 10
+D+N+LP S+
Sbjct: 355 MDINELPLSI 364


>sp|SERC_METMA|PHOSPHOSERINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DVNDLPF 8
D+ND PF
Sbjct: 27 DLNDAPF 33


>sp|NADB_PYRHO|L-ASPARTATE oxidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DVNDLPFS 9
+VND P+S
Sbjct: 371 EVNDAPYS 378


>sp|RLMN_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 2 DVNDLP 7
D+ND+P
Sbjct: 40 DINDIP 45


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DVNDLPF 8
++NDLP+
Sbjct: 334 NINDLPY 340


>sp|H669_METJA|PROBABLE ATP-dependent RNA helicase MJ0669|Methanocaldococcus jannaschii

Query: 1 IDVNDL 6
IDVNDL
Sbjct: 302 IDVNDL 307


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IDVNDLP 7
+D++DLP
Sbjct: 538 VDISDLP 544


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 IDVNDLP 7
+D++DLP
Sbjct: 538 VDISDLP 544


>sp|PDXS_METST|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanosphaera stadtmanae

Query: 1 IDVNDLP 7
ID+N++P
Sbjct: 277 IDINEIP 283


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DVNDLPF 8
++NDLP+
Sbjct: 334 NINDLPY 340


>sp|COXX_HYPBU|PROTOHEME IX farnesyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 IDVNDLPFSM 10
IDVN L FS+
Sbjct: 165 IDVNALLFSL 174


>sp|THSA_SULAC|CHAPERONIN subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IDVNDL 6
IDVNDL
Sbjct: 142 IDVNDL 147


>sp|IPYR_SULAC|INORGANIC pyrophosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DVNDLP 7
D+NDLP
Sbjct: 119 DINDLP 124


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DVNDLPFS 9
DVN+LP +
Sbjct: 468 DVNELPIA 475


>sp|CDC6H_HALMA|ORC1-TYPE DNA replication protein 8|Haloarcula marismortui (strain ATCC

Query: 1 IDVNDLPF 8
+DVN+ PF
Sbjct: 2 VDVNENPF 9


>sp|RECJ1_METJA|EXONUCLEASE RecJ1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VNDLPF 8
+ND+PF
Sbjct: 63 INDIPF 68


>sp|MCH_ARCFU|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VNDLPFS 9
+ND+PF+
Sbjct: 70 INDVPFA 76




17|SequenceR|90|81|QNRFGIDVND

>sp|KCY_PYRFU|CYTIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NRFGIDVND 10
N +GID+ND
Sbjct: 140 NLYGIDIND 148


>sp|KCY_PYRAB|CYTIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 NRFGIDVND 10
N +GID+ND
Sbjct: 140 NLYGIDIND 148


>sp|KCY_PYRHO|CYTIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NRFGIDVND 10
N +GID+ND
Sbjct: 140 NLYGIDIND 148


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QNRFGIDVND 10
+ RFGIDVN+
Sbjct: 1493 KERFGIDVNN 1502


>sp|GCST_THEGJ|PROBABLE aminomethyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 QNRFGIDVND 10
++ FGID+ND
Sbjct: 163 KDLFGIDIND 172


>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 4 FGIDVND 10
FGID+ND
Sbjct: 166 FGIDIND 172


>sp|KCY_THESM|CYTIDYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 2 NRFGIDVND 10
N +GID+ND
Sbjct: 140 NLYGIDIND 148


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 NRFGIDVND 10
NR+GIDV++
Sbjct: 341 NRWGIDVSN 349


>sp|KCY_PYRAE|CYTIDYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 FGIDVND 10
+GID+ND
Sbjct: 139 YGIDIND 145


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 RFGIDVND 10
RFG+D +D
Sbjct: 298 RFGVDFDD 305


>sp|GCST_PYRHO|PROBABLE aminomethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QNRFGIDVND 10
++ FGID+N+
Sbjct: 163 KDLFGIDINE 172


>sp|GCST_PYRAB|PROBABLE aminomethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 QNRFGIDVND 10
++ FGID+N+
Sbjct: 163 RDLFGIDINE 172


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 FGIDVND 10
FGID+N+
Sbjct: 166 FGIDINE 172


>sp|DCDA_METJA|DIAMINOPIMELATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QNRFGIDV 8
+N+FG+DV
Sbjct: 181 KNKFGLDV 188


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 NRFGIDV 8
N+FG+DV
Sbjct: 607 NQFGVDV 613


>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NRFGIDVN 9
NR GID++
Sbjct: 130 NRLGIDIS 137


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 RFGIDVND 10
RFGI V+D
Sbjct: 449 RFGITVHD 456


>sp|UBIX_PYRAB|FLAVIN prenyltransferase UbiX|Pyrococcus abyssi (strain GE5 /

Query: 3 RFGIDVND 10
R+G+D ND
Sbjct: 174 RWGMDYND 181


>sp|IF6_THEKO|TRANSLATION initiation factor 6|Thermococcus kodakarensis (strain ATCC

Query: 2 NRFGIDVN 9
N FGID++
Sbjct: 88 NEFGIDMD 95


>sp|KCY_AERPE|CYTIDYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 4 FGIDVND 10
+GIDV+D
Sbjct: 135 YGIDVSD 141


>sp|KCY_SACI7|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 FGIDVND 10
+GID+ND
Sbjct: 139 YGIDIND 145


>sp|KCY_SACI1|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 FGIDVND 10
+GID+ND
Sbjct: 139 YGIDIND 145


>sp|KCY_SACI6|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 FGIDVND 10
+GID+ND
Sbjct: 139 YGIDIND 145


>sp|KCY_SACI4|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 FGIDVND 10
+GID+ND
Sbjct: 139 YGIDIND 145


>sp|KCY_SACI3|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 FGIDVND 10
+GID+ND
Sbjct: 139 YGIDIND 145


>sp|KCY_SACI2|CYTIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 FGIDVND 10
+GID+ND
Sbjct: 139 YGIDIND 145


>sp|KCY_SACS2|CYTIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 FGIDVND 10
+GID+ND
Sbjct: 139 YGIDIND 145


>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 5 GIDVND 10
G+D+ND
Sbjct: 240 GVDIND 245


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 5 GIDVND 10
G+D+ND
Sbjct: 240 GVDIND 245


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii

Query: 5 GIDVND 10
G+DVND
Sbjct: 76 GLDVND 81


>sp|H669_METJA|PROBABLE ATP-dependent RNA helicase MJ0669|Methanocaldococcus jannaschii

Query: 5 GIDVND 10
GIDVND
Sbjct: 301 GIDVND 306


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 GIDVND 10
G+D+ND
Sbjct: 240 GVDIND 245




18|SequenceR|95|86|RIDDVQNRFG

>sp|G3P1_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 IDDVQNRFG 10
+DDV+N FG
Sbjct: 235 VDDVKNIFG 243


>sp|FLAH_METVO|ARCHAEAL flagellar ATP-binding protein FlaH|Methanococcus voltae

Query: 3 DDVQNRFG 10
DDV RFG
Sbjct: 11 DDVHKRFG 18


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 2 IDDVQNRF 9
IDDV+ RF
Sbjct: 197 IDDVKKRF 204


>sp|Y1654_ARCFU|UNCHARACTERIZED protein AF_1654|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RIDDVQNRFG 10
+I++ QN FG
Sbjct: 149 KINEAQNSFG 158


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 2 IDDVQNRF 9
IDDV+ RF
Sbjct: 194 IDDVKKRF 201


>sp|ASSY_PYRAE|ARGININOSUCCINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RIDDVQNRF 9
RID ++NR
Sbjct: 254 RIDHIENRL 262


>sp|PMDHL_THEKO|PHOSPHOMEVALONATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 RIDDVQN 7
R+DDV+N
Sbjct: 374 RLDDVEN 380


>sp|ASSY_HYPBU|ARGININOSUCCINATE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 RIDDVQNR 8
RID ++NR
Sbjct: 251 RIDHIENR 258


>sp|Y800_METJA|UNCHARACTERIZED protein MJ0800|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IDDVQNRFG 10
ID+V++R G
Sbjct: 44 IDEVEDRLG 52


>sp|PYRB_THEVO|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma volcanium

Query: 2 IDDVQN 7
IDDVQN
Sbjct: 10 IDDVQN 15


>sp|SPSS1_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RIDDVQNRFG 10
RI+DV FG
Sbjct: 143 RIEDVVREFG 152


>sp|COBQ_METST|PROBABLE cobyric acid synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 RIDDVQNRF 9
R DD QN F
Sbjct: 99 RFDDYQNNF 107


>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RIDDVQNRF 9
R+D+V+ RF
Sbjct: 356 RLDEVEMRF 364


>sp|MCRAM_METJA|[METHYL coenzyme M reductase]-L-arginine

Query: 2 IDDVQNRFG 10
+D++ N FG
Sbjct: 244 VDEIHNEFG 252


>sp|PUS10_PICTO|TRNA pseudouridine synthase Pus10|Picrophilus torridus (strain ATCC

Query: 4 DVQNRFG 10
D+Q+RFG
Sbjct: 98 DIQSRFG 104


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 5 VQNRFG 10
+QNRFG
Sbjct: 835 IQNRFG 840


>sp|RLME_NATPD|RIBOSOMAL RNA large subunit methyltransferase|Natronomonas pharaonis (strain

Query: 1 RIDDVQNRFG 10
R+ DV+ RFG
Sbjct: 237 RVTDVKPRFG 246


>sp|TRM56_NATPD|TRNA (cytidine(56)-2'-O)-methyltransferase|Natronomonas pharaonis

Query: 2 IDDVQNRFG 10
I+D+ +RFG
Sbjct: 51 IEDITDRFG 59


>sp|RLME_HALMA|RIBOSOMAL RNA large subunit methyltransferase|Haloarcula marismortui (strain

Query: 1 RIDDVQNRFG 10
RIDDV+ R+
Sbjct: 248 RIDDVKPRYA 257


>sp|TRM56_THEKO|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermococcus kodakarensis

Query: 2 IDDVQNRFG 10
++DV NR+G
Sbjct: 50 VEDVVNRWG 58


>sp|SYH_HALSA|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RIDDVQNRFG 10
R DD+ RFG
Sbjct: 294 RYDDLIERFG 303


>sp|SYH_HALS3|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RIDDVQNRFG 10
R DD+ RFG
Sbjct: 294 RYDDLIERFG 303




19|SequenceR|100|91|SDLFSRIDDV

>sp|IF2P_META3|PROBABLE translation initiation factor IF-2|Methanococcus aeolicus (strain

Query: 1 SDLFSRIDDV 10
+DLFSR+ DV
Sbjct: 181 ADLFSRVKDV 190


>sp|CDC69_HALSA|ORC1-TYPE DNA replication protein 9|Halobacterium salinarum (strain ATCC

Query: 1 SDLFSRIDD 9
DLFSR+DD
Sbjct: 170 EDLFSRVDD 178


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 1 SDLFSRIDDV 10
+DL+SR+ DV
Sbjct: 739 ADLYSRVQDV 748


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 1 SDLFSRIDD 9
+DLFSR+ D
Sbjct: 181 ADLFSRVKD 189


>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 SDLFSRIDD 9
+DLFSR+ D
Sbjct: 181 ADLFSRVKD 189


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 SDLFSRIDD 9
+DLFSR+ D
Sbjct: 181 ADLFSRVKD 189


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 2 DLFSRIDDV 10
DLFS+ D+V
Sbjct: 191 DLFSKFDNV 199


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 SDLFSRIDD 9
+DLFSR+ D
Sbjct: 181 ADLFSRVKD 189


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 SDLFSRIDD 9
+DLFSR+ D
Sbjct: 181 ADLFSRVKD 189


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 LFSRIDDV 10
LFS IDD+
Sbjct: 356 LFSSIDDI 363


>sp|DPM1_PYRFU|DOLICHOL-PHOSPHATE mannosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DLFSRIDD 9
+LFSRID+
Sbjct: 18 ELFSRIDN 25


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 LFSRIDD 9
LFSRI+D
Sbjct: 530 LFSRIED 536


>sp|MPGP_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DLFSRIDDV 10
DL+ R+D+V
Sbjct: 189 DLYKRVDEV 197


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 2 DLFSRID 8
DLFS++D
Sbjct: 1104 DLFSKVD 1110


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SDLFSRIDD 9
S +FS+IDD
Sbjct: 526 SIVFSKIDD 534


>sp|MPTA_PICTO|GTP cyclohydrolase MptA|Picrophilus torridus (strain ATCC 700027

Query: 1 SDLFSRID 8
+DLFSRI+
Sbjct: 82 NDLFSRIN 89


>sp|DADD_METBU|5'-DEOXYADENOSINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SDLFSRID 8
SDL SR+D
Sbjct: 424 SDLVSRVD 431


>sp|TOP6B_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 1 SDLFSRIDDV 10
SDL++ +DDV
Sbjct: 390 SDLYALVDDV 399


>sp|RADA_METLZ|DNA repair and recombination protein|Methanocorpusculum labreanum

Query: 2 DLFSRIDDV 10
DLF +DD+
Sbjct: 246 DLFKLVDDL 254


>sp|AATC_HALSA|A-TYPE ATP synthase subunit C|Halobacterium salinarum (strain ATCC 700922

Query: 1 SDLFSRIDD 9
SDL SRI D
Sbjct: 258 SDLVSRIQD 266


>sp|AATC_HALS3|A-TYPE ATP synthase subunit C|Halobacterium salinarum (strain ATCC 29341

Query: 1 SDLFSRIDD 9
SDL SRI D
Sbjct: 258 SDLVSRIQD 266


>sp|RIBL_METB6|FAD synthase|Methanoregula boonei (strain DSM 21154

Query: 1 SDLFSRIDDV 10
+D+F IDD+
Sbjct: 75 TDMFCPIDDI 84


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 SDLFSRIDDV 10
SDL++ I+DV
Sbjct: 389 SDLWTAIEDV 398




20|SequenceR|105|96|HDLHRSDLFS

>sp|Y078_THEAC|UPF0284 protein Ta0078|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 HRSDLF 9
HRSDLF
Sbjct: 268 HRSDLF 273


>sp|ENGB_METMA|PROBABLE GTP-binding protein EngB|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HDLHRSDLF 9
H++ R DLF
Sbjct: 198 HEMKRDDLF 206


>sp|ENGB_METBF|PROBABLE GTP-binding protein EngB|Methanosarcina barkeri (strain Fusaro /

Query: 1 HDLHRSDLF 9
H++ R DLF
Sbjct: 198 HEMKRDDLF 206


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 1 HDLHR 5
HDLHR
Sbjct: 630 HDLHR 634


>sp|Y153_THEVO|UPF0284 protein TV0153|Thermoplasma volcanium (strain ATCC 51530

Query: 4 HRSDLFS 10
HR++LFS
Sbjct: 266 HRTELFS 272


>sp|FLAB2_NATMM|FLAGELLIN B2|Natrialba magadii (strain ATCC 43099

Query: 2 DLHRSDLF 9
DLH D+F
Sbjct: 215 DLHEDDVF 222


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DLHRSDL 8
DLH++DL
Sbjct: 468 DLHKNDL 474


>sp|PGK_HALLT|PHOSPHOGLYCERATE kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 HDLHRSDLF 9
HDL +DLF
Sbjct: 241 HDLEGTDLF 249


>sp|Y1944_ARCFU|UNCHARACTERIZED protein AF_1944|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DLHRSD 7
DLHRSD
Sbjct: 140 DLHRSD 145


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 HDLHRSDLFS 10
+D+HR+D+ S
Sbjct: 97 NDIHRTDVPS 106


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 HDLHRSDLFS 10
+D+HR+D+ S
Sbjct: 97 NDIHRTDVPS 106




21|SequenceR|110|101|NYVTYHDLHR

>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 2 YVTYHDLHR 10
Y ++HDLHR
Sbjct: 626 YTSHHDLHR 634


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 2 YVTYHDLHR 10
Y +YHD+HR
Sbjct: 630 YSSYHDMHR 638


>sp|AROD_METS3|3-DEHYDROQUINATE dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 VTYHDLHR 10
V+YHD H+
Sbjct: 117 VSYHDFHK 124


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YVTYHDL 8
YVTYHD+
Sbjct: 878 YVTYHDI 884


>sp|RL3_THEKO|LARGE ribosomal subunit protein uL3|Thermococcus kodakarensis (strain

Query: 3 VTYHDLHR 10
V +HDLH+
Sbjct: 99 VWFHDLHK 106


>sp|Y1562_ARCFU|UNCHARACTERIZED protein AF_1562|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NYVTYHDL 8
NYVTY D+
Sbjct: 78 NYVTYGDV 85


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 VTYHDLHR 10
+TY+DL+R
Sbjct: 121 LTYYDLYR 128


>sp|PCP_PYRFU|PYRROLIDONE-CARBOXYLATE peptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NYVTYHDLH 9
NYV Y LH
Sbjct: 143 NYVMYLSLH 151


>sp|MSRB_METTH|PEPTIDE methionine sulfoxide reductase MsrB|Methanothermobacter

Query: 5 YHDLH 9
YHDLH
Sbjct: 53 YHDLH 57


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 1 NYVTYHDL 8
+YV+YH L
Sbjct: 87 DYVSYHKL 94


>sp|AROD_METAR|3-DEHYDROQUINATE dehydratase|Methanocella arvoryzae (strain DSM 22066

Query: 3 VTYHDLHR 10
V+YHD R
Sbjct: 113 VSYHDFDR 120


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YVTYHDLHR 10
+ TY+ LHR
Sbjct: 469 FCTYNTLHR 477


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YVTYHDLHR 10
YV H +HR
Sbjct: 417 YVEKHGMHR 425


>sp|Y2020_ARCFU|UNCHARACTERIZED protein AF_2020|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NYVTYHDL 8
N+V YHD+
Sbjct: 136 NFVFYHDM 143


>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 3 VTYHD 7
VTYHD
Sbjct: 380 VTYHD 384


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 3 VTYHD 7
VTYHD
Sbjct: 377 VTYHD 381


>sp|HDRD_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina thermophila

Query: 3 VTYHD 7
VTYHD
Sbjct: 293 VTYHD 297


>sp|HDRD_METMA|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina mazei (strain

Query: 3 VTYHD 7
VTYHD
Sbjct: 293 VTYHD 297


>sp|HDRD_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina acetivorans

Query: 3 VTYHD 7
VTYHD
Sbjct: 293 VTYHD 297


>sp|PGMI_THEAC|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma acidophilum

Query: 1 NYVTYH 6
+YVTYH
Sbjct: 282 DYVTYH 287


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VTYHD 7
VTYHD
Sbjct: 1048 VTYHD 1052


>sp|ARCH_THEKO|PROTEIN archease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VTYHDL 8
+TYHD+
Sbjct: 119 ITYHDM 124


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 3 VTYHDLHR 10
VT++D+H+
Sbjct: 322 VTFYDIHK 329


>sp|HEM1_THEAC|GLUTAMYL-TRNA reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NYVTYHDLH 9
+Y T +DLH
Sbjct: 202 SYTTINDLH 210


>sp|LIPA_PICTO|LIPOYL synthase|Picrophilus torridus (strain ATCC 700027

Query: 4 TYHDLH 9
T HDLH
Sbjct: 211 TLHDLH 216


>sp|ARCH_PYRHO|PROTEIN archease|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VTYHDL 8
+TYHD+
Sbjct: 119 ITYHDM 124


>sp|ARCH_PYRFU|PROTEIN archease|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VTYHDL 8
+TYHD+
Sbjct: 119 ITYHDM 124




22|SequenceR|115|106|SKPSLNYVTY

>sp|ALBA1_METKA|DNA/RNA-BINDING protein Alba 1|Methanopyrus kandleri (strain AV19 /

Query: 1 SKPSLNYV 8
SKP +NYV
Sbjct: 12 SKPVMNYV 19


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 2 KPSLNYVT 9
+PSL+YVT
Sbjct: 345 EPSLDYVT 352


>sp|DAPAT_METMP|LL-DIAMINOPIMELATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SKPSLNYVT 9
SKP+L Y+T
Sbjct: 115 SKPALAYIT 123


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 2 KPSLNYVT 9
+PSL+YVT
Sbjct: 345 EPSLDYVT 352


>sp|DAPAT_METJA|LL-DIAMINOPIMELATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SKPSLNYVT 9
SKP+L Y+T
Sbjct: 115 SKPALAYIT 123


>sp|ALBA_PICTO|DNA/RNA-BINDING protein Alba|Picrophilus torridus (strain ATCC 700027

Query: 2 KPSLNYV 8
KP++NYV
Sbjct: 12 KPTMNYV 18


>sp|ALBA_THEVO|DNA/RNA-BINDING protein Alba|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KPSLNYV 8
KP++NYV
Sbjct: 12 KPTMNYV 18


>sp|ALBA_THEAC|DNA/RNA-BINDING protein Alba|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KPSLNYV 8
KP++NYV
Sbjct: 12 KPTMNYV 18


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 3 PSLNYVTY 10
PS+NY+ +
Sbjct: 425 PSVNYIIF 432


>sp|ALBA_METTP|DNA/RNA-BINDING protein Alba|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 SKPSLNYV 8
+KP +NYV
Sbjct: 11 NKPVMNYV 18


>sp|ALBA_METTH|DNA/RNA-BINDING protein Alba|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 SKPSLNYV 8
+KP +NYV
Sbjct: 11 NKPVMNYV 18


>sp|ALBA_METAR|DNA/RNA-BINDING protein Alba|Methanocella arvoryzae (strain DSM 22066

Query: 1 SKPSLNYV 8
+KP +NYV
Sbjct: 11 NKPVMNYV 18


>sp|ALBA2_ARCFU|DNA/RNA-BINDING protein Alba 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SKPSLNYV 8
+KP +NYV
Sbjct: 10 NKPVMNYV 17


>sp|ALBA1_ARCFU|DNA/RNA-BINDING protein Alba 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SKPSLNYV 8
+KP +NYV
Sbjct: 10 NKPVMNYV 17


>sp|ALBA_METST|DNA/RNA-BINDING protein Alba|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SKPSLNYV 8
+KP +NYV
Sbjct: 11 NKPVMNYV 18


>sp|ALBA_METMJ|DNA/RNA-BINDING protein Alba|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SKPSLNYV 8
+KP +NYV
Sbjct: 11 NKPVMNYV 18


>sp|ALBA1_AERPE|DNA/RNA-BINDING protein Alba 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 KPSLNYV 8
KP++NYV
Sbjct: 16 KPTINYV 22


>sp|ALBA_METPE|DNA/RNA-BINDING protein Alba|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 SKPSLNYV 8
+KP +NYV
Sbjct: 11 NKPVMNYV 18


>sp|TREH_THEAC|TREHALASE acidophilum (strain ATCC 25905

Query: 2 KPSLNYVT 9
KP+ NY T
Sbjct: 107 KPAFNYAT 114


>sp|Y1562_ARCFU|UNCHARACTERIZED protein AF_1562|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 LNYVTY 10
+NYVTY
Sbjct: 77 INYVTY 82




23|SequenceR|120|111|KATRYSKPSL

>sp|MPTE_METTH|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 3 TRYSKPSL 10
TRYS+P +
Sbjct: 189 TRYSRPDM 196


>sp|IMDH_KORCO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 RYSKPS 9
RYSKPS
Sbjct: 398 RYSKPS 403


>sp|MPTE_METJA|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TRYSKPSL 10
T+YS+P++
Sbjct: 199 TKYSRPNI 206


>sp|ARGC_METPE|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 RYSKPSL 10
RY KPS+
Sbjct: 262 RYQKPSI 268


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 1 KATRYSKP 8
KA RY KP
Sbjct: 379 KAQRYLKP 386


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain

Query: 4 RYSKPSL 10
RY KPS+
Sbjct: 61 RYEKPSI 67


>sp|CAPPA_PYRCJ|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KATRYSKP 8
KAT YS+P
Sbjct: 46 KATPYSQP 53




24|SequenceR|125|116|VRSHFKATRY

>sp|TRPG_SACS2|ANTHRANILATE synthase component 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VRSHFKATRY 10
+ FKATRY
Sbjct: 126 IAKEFKATRY 135


>sp|TRPG_METTM|ANTHRANILATE synthase component 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 VRSHFKATRY 10
V + F+ATRY
Sbjct: 127 VPNPFRATRY 136


>sp|TRPG_METTH|ANTHRANILATE synthase component 2|Methanothermobacter thermautotrophicus (strain

Query: 1 VRSHFKATRY 10
V + F+ATRY
Sbjct: 127 VPNPFRATRY 136


>sp|TRM9_HALVD|TRNA (carboxymethyluridine(34)-5-O)-methyltransferase|Haloferax

Query: 1 VRSHFKATR 9
+ SHF +TR
Sbjct: 17 IASHFASTR 25


>sp|Y1147_METJA|UNCHARACTERIZED protein MJ1147|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SHFKATRY 10
SHFK+T +
Sbjct: 166 SHFKSTTF 173




25|SequenceR|130|121|WSCESVRSHF

>sp|RS19_METBU|SMALL ribosomal subunit protein uS19|Methanococcoides burtonii (strain

Query: 4 ESVRSHF 10
ESVR+HF
Sbjct: 66 ESVRTHF 72


>sp|CSD_AERPE|PROBABLE cysteine desulfurase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WSCESVRSHF 10
+SC VRS F
Sbjct: 4 FSCYEVRSEF 13


>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain Fusaro

Query: 1 WSCESVRSH 9
WS ESV H
Sbjct: 310 WSNESVEYH 318


>sp|PHR_METTH|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 WSCESVRSHF 10
W SVRSH+
Sbjct: 25 WMQASVRSHW 34


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CESVRSHF 10
CES HF
Sbjct: 98 CESYAEHF 105




26|SequenceR|135|126|AQRIPWSCES

>sp|SPEE2_HYPBU|POLYAMINE aminopropyltransferase 2|Hyperthermus butylicus (strain DSM

Query: 1 AQRIPW 6
AQR+PW
Sbjct: 2 AQRLPW 7


>sp|GLMS_PYRAE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrobaculum aerophilum (strain ATCC

Query: 2 QRIPWSCE 9
+ IPWS E
Sbjct: 240 EEIPWSAE 247




27|SequenceR|140|131|NHLSPAQRIP

>sp|Y774_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0774|Methanocaldococcus

Query: 1 NHLSPAQ 7
NHL+PAQ
Sbjct: 330 NHLTPAQ 336


>sp|IDI2_SACSH|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 HLSPAQRI 9
HL+PAQ +
Sbjct: 155 HLNPAQEV 162


>sp|IDI2_SACS2|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 HLSPAQRI 9
HL+PAQ +
Sbjct: 155 HLNPAQEV 162


>sp|IDI2_SACI7|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 HLSPAQRI 9
HL+PAQ +
Sbjct: 155 HLNPAQEV 162


>sp|IDI2_SACI6|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 HLSPAQRI 9
HL+PAQ +
Sbjct: 155 HLNPAQEV 162


>sp|IDI2_SACI4|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 HLSPAQRI 9
HL+PAQ +
Sbjct: 155 HLNPAQEV 162


>sp|IDI2_SACI3|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain M.16.27)

Query: 2 HLSPAQRI 9
HL+PAQ +
Sbjct: 155 HLNPAQEV 162


>sp|IDI2_SACI2|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 HLSPAQRI 9
HL+PAQ +
Sbjct: 155 HLNPAQEV 162


>sp|IDI2_SACI1|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 HLSPAQRI 9
HL+PAQ +
Sbjct: 155 HLNPAQEV 162


>sp|RNZ_METTH|RIBONUCLEASE Z|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 NHLSPAQRIP 10
NH S A RIP
Sbjct: 19 NHTSIALRIP 28


>sp|THIL_ARCFU|THIAMINE-MONOPHOSPHATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NHLSPAQ 7
+HLSPA+
Sbjct: 234 SHLSPAE 240


>sp|IDI2_METS5|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Metallosphaera sedula (strain ATCC 51363

Query: 2 HLSPAQRI 9
HL+PAQ +
Sbjct: 153 HLNPAQEL 160


>sp|Y22A_METJA|UNCHARACTERIZED protein MJ0226.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NHLSPAQ 7
NHL+P Q
Sbjct: 187 NHLNPIQ 193


>sp|BIOW_METMP|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NHLSPAQRI 9
NH+S A+R+
Sbjct: 13 NHVSGAERL 21


>sp|BIOW_METM6|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 NHLSPAQRI 9
NH+S A+R+
Sbjct: 13 NHVSGAERL 21


>sp|BIOW_METM5|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 NHLSPAQRI 9
NH+S A+R+
Sbjct: 13 NHVSGAERL 21




28|SequenceR|145|136|CVAFLNHLSP

>sp|Y486_METJA|UNCHARACTERIZED protein MJ0486|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FLNHLSP 10
FL HLSP
Sbjct: 266 FLEHLSP 272


>sp|PUR1_PYRHO|AMIDOPHOSPHORIBOSYLTRANSFERASE horikoshii (strain ATCC 700860

Query: 2 VAFLNHLS 9
V+FLNH S
Sbjct: 137 VSFLNHYS 144


>sp|LYSJ_SULAC|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfolobus

Query: 2 VAFLNHLSP 10
VAFL H +P
Sbjct: 39 VAFLGHRNP 47


>sp|NADK_NATPD|NAD kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VAFLNHLSP 10
V FLN +SP
Sbjct: 84 VGFLNAVSP 92


>sp|Y774_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0774|Methanocaldococcus

Query: 5 LNHLSP 10
LNHL+P
Sbjct: 329 LNHLTP 334


>sp|PUR1_PYRAB|AMIDOPHOSPHORIBOSYLTRANSFERASE abyssi (strain GE5 /

Query: 2 VAFLNHLS 9
++FLNH S
Sbjct: 137 ISFLNHYS 144


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VAFLNHLSP 10
V +L HL+P
Sbjct: 514 VEYLKHLAP 522


>sp|HFLX_THEPD|GTPASE HflX|Thermofilum pendens (strain DSM 2475

Query: 2 VAFLNHLSP 10
V FLN L P
Sbjct: 75 VVFLNDLKP 83


>sp|PRIL_SULTO|DNA primase large subunit PriL|Sulfurisphaera tokodaii (strain DSM

Query: 1 CVAFLNHLSP 10
CVA N L+P
Sbjct: 288 CVASCNTLNP 297




29|SequenceR|150|141|NYMNRCVAFL

>sp|KADA_METVS|ADENYLATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 YMNRCVA 8
+MNRC A
Sbjct: 153 FMNRCAA 159


>sp|KADA_METVO|ADENYLATE kinase|Methanococcus voltae

Query: 2 YMNRCVA 8
+MNRC A
Sbjct: 153 FMNRCAA 159


>sp|KADA_METJA|ADENYLATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YMNRCVA 8
+MNRC A
Sbjct: 153 FMNRCAA 159


>sp|KADA_METIG|ADENYLATE kinase|Methanotorris igneus (Methanococcus igneus)

Query: 2 YMNRCVA 8
+MNRC A
Sbjct: 153 FMNRCAA 159


>sp|KADA_META3|ADENYLATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 YMNRCVA 8
+MNRC A
Sbjct: 153 FMNRCAA 159


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 NYMNRCVAF 9
N++NR V F
Sbjct: 388 NFLNRAVTF 396


>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 1 NYMNRCV 7
N+MN CV
Sbjct: 108 NFMNYCV 114


>sp|RNP4_PYRAB|RIBONUCLEASE P protein component 4|Pyrococcus abyssi (strain GE5 /

Query: 2 YMNRCVAFL 10
Y RC AFL
Sbjct: 63 YCKRCHAFL 71


>sp|Y317_METJA|UNCHARACTERIZED protein MJ0317|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NYMNRCV 7
NY+ RC+
Sbjct: 170 NYLKRCL 176




30|SequenceR|155|146|NQLLWNYMNR

>sp|ENDA_THEVO|TRNA-SPLICING endonuclease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NQLLWNYMNR 10
N+L+W Y++R
Sbjct: 248 NKLIWYYISR 257


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 QLLWNYMN 9
Q+LW Y+N
Sbjct: 180 QVLWGYLN 187


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QLLWNYMN 9
Q+LW Y+N
Sbjct: 179 QVLWGYLN 186


>sp|ARLY_METKA|ARGININOSUCCINATE lyase|Methanopyrus kandleri (strain AV19 /

Query: 1 NQLLWNYMNR 10
N LLW+ +NR
Sbjct: 325 NGLLWDSVNR 334


>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NQLLWNY 7
NQ+LW Y
Sbjct: 310 NQILWEY 316


>sp|MTXH_METMA|PUTATIVE methyltransferase mtx subunit H|Methanosarcina mazei (strain ATCC

Query: 5 WNYMNR 10
WN++NR
Sbjct: 234 WNWLNR 239


>sp|MTXH_METAC|PUTATIVE methyltransferase mtx subunit H|Methanosarcina acetivorans (strain

Query: 5 WNYMNR 10
WN++NR
Sbjct: 234 WNWLNR 239


>sp|Y2020_ARCFU|UNCHARACTERIZED protein AF_2020|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LWNYMNR 10
LWN +NR
Sbjct: 116 LWNLLNR 122


>sp|TRPG_SACS2|ANTHRANILATE synthase component 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 QLLWNYMNR 10
++L+N++NR
Sbjct: 186 KILYNFLNR 194


>sp|PURL_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus abyssi (strain GE5 /

Query: 1 NQLLWNYM 8
+++ WNYM
Sbjct: 692 SRIYWNYM 699


>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 LWNYMNR 10
LW+Y+N+
Sbjct: 4 LWDYLNK 10


>sp|Y948_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB09480|Pyrococcus abyssi (strain GE5 /

Query: 2 QLLWNY 7
+L+WNY
Sbjct: 227 ELVWNY 232


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 NQLLWNYMNR 10
N +W Y NR
Sbjct: 737 NSAVWRYKNR 746


>sp|Y1236_ARCFU|UNCHARACTERIZED protein AF_1236|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 WNYMNR 10
WN++NR
Sbjct: 124 WNWLNR 129


>sp|BRIX_METTH|PROBABLE Brix domain-containing ribosomal biogenesis|Methanothermobacter

Query: 5 WNYMNR 10
W Y+NR
Sbjct: 26 WRYINR 31


>sp|Y3535_METJA|UNCHARACTERIZED protein MJECL35|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NQLLWNYMN 9
NQ++W N
Sbjct: 125 NQIIWKLQN 133


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QLLWNYMN 9
Q+ W Y+N
Sbjct: 174 QVYWGYLN 181


>sp|BRIX_ARCFU|PROBABLE Brix domain-containing ribosomal biogenesis|Archaeoglobus

Query: 5 WNYMNR 10
W Y+NR
Sbjct: 27 WKYVNR 32


>sp|Y524_METJA|UNCHARACTERIZED protein MJ0524|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LWNYMNR 10
+WNY+++
Sbjct: 12 IWNYLSK 18




31|SequenceR|160|151|CVNKPNQLLW

>sp|AROA_CALMQ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 CVNKPNQLLW 10
CVNK N+L W
Sbjct: 392 CVNKSNRLFW 401


>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CVNKPNQLLW 10
C+ NQ+LW
Sbjct: 305 CIKIGNQILW 314


>sp|MEND_HALWD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VNKPNQLLW 10
V P QLLW
Sbjct: 343 VADPTQLLW 351


>sp|OTC_PYRHO|ORNITHINE carbamoyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VNKPNQLLW 10
++ PN ++W
Sbjct: 284 IDSPNSVVW 292


>sp|OTC_PYRAB|ORNITHINE carbamoyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 VNKPNQLLW 10
++ PN ++W
Sbjct: 284 IDSPNSVVW 292


>sp|OTCA_PYRFU|ORNITHINE carbamoyltransferase, anabolic|Pyrococcus furiosus (strain ATCC

Query: 2 VNKPNQLLW 10
++ PN ++W
Sbjct: 284 IDSPNSVVW 292


>sp|CS2H_ACIS1|CARBON disulfide hydrolase|Acidianus sp. (strain A1-3)

Query: 2 VNKPNQLLW 10
+ KPNQ+++
Sbjct: 182 LRKPNQIIY 190


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CVNKPNQLL 9
C+N NQL+
Sbjct: 471 CINLSNQLV 479




32|SequenceR|165|156|LCHVVCVNKP

>sp|Y625_METJA|UNCHARACTERIZED ATP-binding protein MJ0625|Methanocaldococcus jannaschii (strain

Query: 1 LCHVVCV 7
LCHV+C+
Sbjct: 167 LCHVICL 173


>sp|Y3526_METJA|UNCHARACTERIZED ATP-binding protein MJECL26|Methanocaldococcus jannaschii (strain

Query: 1 LCHVVCV 7
LCHV+C+
Sbjct: 171 LCHVICL 177


>sp|Y1076_METJA|UNCHARACTERIZED ATP-binding protein MJ1076|Methanocaldococcus jannaschii (strain

Query: 1 LCHVVCV 7
LCHV+C+
Sbjct: 167 LCHVICL 173


>sp|Y1006_METJA|UNCHARACTERIZED ATP-binding protein MJ1006|Methanocaldococcus jannaschii (strain

Query: 1 LCHVVCV 7
LCHV+C+
Sbjct: 189 LCHVICL 195


>sp|Y1659_METJA|UNCHARACTERIZED ATP-binding protein MJ1659|Methanocaldococcus jannaschii (strain

Query: 1 LCHVVCVN 8
LCHV+C++
Sbjct: 188 LCHVLCLS 195


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 HVVCVNKP 10
H+VC+++P
Sbjct: 553 HIVCMDRP 560


>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 1 LCHVVCVN 8
LCHV C++
Sbjct: 195 LCHVFCLS 202


>sp|Y632_METJA|UNCHARACTERIZED ATP-binding protein MJ0632|Methanocaldococcus jannaschii (strain

Query: 1 LCHVVCVN 8
LCHV C++
Sbjct: 189 LCHVFCLS 196


>sp|Y439_METJA|UNCHARACTERIZED ATP-binding protein MJ0439|Methanocaldococcus jannaschii (strain

Query: 1 LCHVVCVN 8
LCHV C++
Sbjct: 186 LCHVFCLS 193


>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 1 LCHVVCVN 8
LCHV C++
Sbjct: 189 LCHVFCLS 196


>sp|Y1609_METJA|UNCHARACTERIZED ATP-binding protein MJ1609|Methanocaldococcus jannaschii (strain

Query: 1 LCHVVCVN 8
LCHV C++
Sbjct: 189 LCHVFCLS 196


>sp|Y147_METJA|UNCHARACTERIZED ATP-binding protein MJ0147|Methanocaldococcus jannaschii (strain

Query: 1 LCHVVCVN 8
LCHV C++
Sbjct: 183 LCHVFCLS 190


>sp|Y1301_METJA|UNCHARACTERIZED ATP-binding protein MJ1301|Methanocaldococcus jannaschii (strain

Query: 1 LCHVVCVN 8
LCHV C++
Sbjct: 181 LCHVFCLS 188


>sp|Y1010_METJA|UNCHARACTERIZED ATP-binding protein MJ1010|Methanocaldococcus jannaschii (strain

Query: 1 LCHVVCVN 8
LCHV C++
Sbjct: 192 LCHVFCLS 199


>sp|Y074_METJA|UNCHARACTERIZED ATP-binding protein MJ0074|Methanocaldococcus jannaschii (strain

Query: 1 LCHVVCVN 8
LCHV C++
Sbjct: 174 LCHVFCLS 181


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 HVVCVNKP 10
H VC++KP
Sbjct: 551 HYVCMDKP 558


>sp|METXA_HALVD|HOMOSERINE O-acetyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 3 HVVCVNKP 10
+V+CVN P
Sbjct: 94 YVICVNVP 101


>sp|METXA_HALPT|HOMOSERINE O-acetyltransferase|Haloferax prahovense (strain DSM 18310

Query: 3 HVVCVNKP 10
+V+CVN P
Sbjct: 94 YVICVNVP 101


>sp|METXA_HALGM|HOMOSERINE O-acetyltransferase|Haloferax gibbonsii (strain ATCC 33959

Query: 3 HVVCVNKP 10
+V+CVN P
Sbjct: 94 YVICVNVP 101


>sp|RADA_CENSY|DNA repair and recombination protein|Cenarchaeum symbiosum (strain A)

Query: 1 LCHVVCV 7
CH +CV
Sbjct: 123 FCHTMCV 129


>sp|HPRL_HALMD|HGPRTASE-LIKE protein|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 LCHVVCVNK 9
+C +VCV K
Sbjct: 144 ICDIVCVIK 152


>sp|TRUB_ARCFU|PROBABLE tRNA pseudouridine synthase B|Archaeoglobus fulgidus (strain ATCC

Query: 4 VVCVNKP 10
+VC++KP
Sbjct: 35 LVCIDKP 41


>sp|G1PDH_AERPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Aeropyrum pernix (strain ATCC 700893

Query: 3 HVVCVNKP 10
H+V NKP
Sbjct: 260 HIVARNKP 267


>sp|METXA_HALMA|HOMOSERINE O-acetyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 3 HVVCVNKP 10
+VVC N P
Sbjct: 84 YVVCANVP 91


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 HVVCVNKP 10
+VVC N P
Sbjct: 96 YVVCANVP 103


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 3 HVVCVNKP 10
H +C +KP
Sbjct: 551 HYICKDKP 558


>sp|AROD_PYRAE|3-DEHYDROQUINATE dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LCHVVCVNKP 10
+C VV V KP
Sbjct: 8 ICGVVPVRKP 17


>sp|PMK_SACS2|PHOSPHOMEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LCHVVCVNK 9
+ HV+ VNK
Sbjct: 23 ISHVIAVNK 31


>sp|RSMA_PYRFU|PROBABLE ribosomal RNA small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CHVVCVNK 9
CH++ +NK
Sbjct: 224 CHMLGINK 231


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CHVVCVNK 9
C+V CV K
Sbjct: 80 CYVGCVEK 87


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 2 CHVVCVNKP 10
C+ + +NKP
Sbjct: 407 CYTLGINKP 415




33|SequenceR|170|161|AARGDLCHVV

>sp|TRM1_PYRHO|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus horikoshii

Query: 3 RGDLCHVV 10
RG+LCH V
Sbjct: 191 RGELCHEV 198


>sp|TRM1_PYRFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus furiosus (strain

Query: 3 RGDLCHVV 10
RG+LCH V
Sbjct: 190 RGELCHEV 197


>sp|TRM1_PYRAB|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus abyssi (strain

Query: 3 RGDLCHVV 10
RG+LCH V
Sbjct: 188 RGELCHEV 195


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 3 RGDLCHVV 10
RGDL HV+
Sbjct: 462 RGDLSHVI 469


>sp|TRM1_THEON|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus onnurineus

Query: 3 RGDLCH 8
RG+LCH
Sbjct: 188 RGELCH 193


>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 3 RGDLCH 8
RG+LCH
Sbjct: 189 RGELCH 194


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 AARGDLCHV 9
ARGD C V
Sbjct: 150 GARGDQCEV 158


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 ARGDLCHV 9
ARGD C V
Sbjct: 149 ARGDHCEV 156


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ARGDLCHV 9
ARGD C V
Sbjct: 149 ARGDHCEV 156


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 ARGDLCHV 9
ARGD C V
Sbjct: 149 ARGDHCEV 156


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 ARGDLCHV 9
ARGD C V
Sbjct: 149 ARGDHCEV 156


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ARGDLCHV 9
ARGD C V
Sbjct: 149 ARGDHCEV 156


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 ARGDLCHV 9
ARGD C V
Sbjct: 151 ARGDHCEV 158


>sp|CAS5B_SACS2|CRISPR-ASSOCIATED protein Cas5 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 RGDLCHV 9
RGD+C V
Sbjct: 236 RGDICKV 242


>sp|RL21_METMP|LARGE ribosomal subunit protein eL21|Methanococcus maripaludis (strain

Query: 4 GDLCHVV 10
GDL HVV
Sbjct: 37 GDLVHVV 43


>sp|Y1105_METKA|PUTATIVE nickel insertion protein|Methanopyrus kandleri (strain AV19 /

Query: 4 GDLCHV 9
GDLCH+
Sbjct: 112 GDLCHL 117


>sp|RL14_NITMS|LARGE ribosomal subunit protein uL14|Nitrosopumilus maritimus (strain

Query: 1 AARGDLCHVV 10
A+ GD C+VV
Sbjct: 55 ASVGDFCNVV 64


>sp|APGM_METST|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaera stadtmanae (strain ATCC

Query: 1 AARGDLCHV 9
AA+G LC +
Sbjct: 380 AAKGGLCRI 388


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AARGDLCHVV 10
A RG+L H V
Sbjct: 318 APRGELVHYV 327


>sp|Y1942_ARCFU|UNCHARACTERIZED protein AF_1942|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ARGDLCH 8
A+G+ CH
Sbjct: 109 AKGEFCH 115


>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC 700027

Query: 2 ARGDLCHVV 10
RG +CH V
Sbjct: 93 GRGGVCHQV 101


>sp|Y292_METBF|UPF0179 protein Mbar_A0292|Methanosarcina barkeri (strain Fusaro /

Query: 2 ARGDLCHVV 10
+RGD C +V
Sbjct: 118 SRGDKCKIV 126




34|SequenceR|175|166|VLISSAARGD

>sp|AROC_CALMQ|CHORISMATE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 VLISSAARGD 10
VLI++A GD
Sbjct: 196 VLINAATEGD 205




35|SequenceR|180|171|IFMAGVLISS

***** No hits found ******


36|SequenceR|185|176|YLNCFIFMAG

>sp|PYLB_METBF|3-METHYLORNITHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YLNCFIFMA 9
+LNCFI+ +
Sbjct: 60 FLNCFIYFS 68


>sp|PYLB_METAC|3-METHYLORNITHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YLNCFIFMA 9
+LNCFI+ +
Sbjct: 60 FLNCFIYFS 68


>sp|NADK_ARCFU|NAD kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YLNCFIFM 8
YL CFI +
Sbjct: 170 YLECFILI 177


>sp|Y1059_METJA|UNCHARACTERIZED glycosyltransferase MJ1059|Methanocaldococcus jannaschii (strain

Query: 3 NCFIF 7
NCF+F
Sbjct: 278 NCFVF 282


>sp|Y1357_HALVD|PUTATIVE transcriptional regulator HVO_1357|Haloferax volcanii (strain ATCC

Query: 2 LNCFIFMAG 10
L CFI +AG
Sbjct: 396 LACFISVAG 404




37|SequenceR|190|181|PGPTSYLNCF

>sp|GGR2_METTH|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GPTSYLNCF 10
GP SYLN F
Sbjct: 230 GPLSYLNRF 238


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 4 TSYLNCF 10
TSYL CF
Sbjct: 1325 TSYLRCF 1331


>sp|GGR_METAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PGPTSYLNCF 10
P P YLN F
Sbjct: 235 PRPVDYLNNF 244


>sp|GGR_METBF|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PGPTSYLNCF 10
P P YLN F
Sbjct: 235 PRPVDYLNKF 244


>sp|GGR_METMA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGPTSYLNCF 10
P P YLN F
Sbjct: 235 PRPVDYLNDF 244


>sp|TRUB_THEON|PROBABLE tRNA pseudouridine synthase B|Thermococcus onnurineus (strain

Query: 1 PGPTSY 6
PGPTS+
Sbjct: 55 PGPTSH 60


>sp|TRUB_THEKO|PROBABLE tRNA pseudouridine synthase B|Thermococcus kodakarensis (strain

Query: 1 PGPTSY 6
PGPTS+
Sbjct: 55 PGPTSH 60


>sp|TRUB_THEGJ|PROBABLE tRNA pseudouridine synthase B|Thermococcus gammatolerans (strain

Query: 1 PGPTSY 6
PGPTS+
Sbjct: 55 PGPTSH 60


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 1 PGPTSY 6
PGPTS+
Sbjct: 56 PGPTSH 61


>sp|TRUB_PYRHO|PROBABLE tRNA pseudouridine synthase B|Pyrococcus horikoshii (strain ATCC

Query: 1 PGPTSY 6
PGPTS+
Sbjct: 55 PGPTSH 60


>sp|TRUB_PYRFU|PROBABLE tRNA pseudouridine synthase B|Pyrococcus furiosus (strain ATCC

Query: 1 PGPTSY 6
PGPTS+
Sbjct: 55 PGPTSH 60


>sp|TRUB_PYRAB|PROBABLE tRNA pseudouridine synthase B|Pyrococcus abyssi (strain GE5 /

Query: 1 PGPTSY 6
PGPTS+
Sbjct: 55 PGPTSH 60


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC

Query: 1 PGPTSY 6
PGPTS+
Sbjct: 65 PGPTSH 70


>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 1 PGPTSYLN 8
P PTSY +
Sbjct: 199 PDPTSYFD 206


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PGPTSYL 7
PGP S+L
Sbjct: 388 PGPCSFL 394


>sp|SUHB_AERPE|INOSITOL-1-MONOPHOSPHATASE pernix (strain ATCC 700893

Query: 2 GPTSYLNC 9
G T+YL+C
Sbjct: 88 GSTNYLSC 95


>sp|RIBL_THEKO|FAD synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GPTSYLNC 9
GP + NC
Sbjct: 99 GPDQFFNC 106


>sp|UREG_HALWD|UREASE accessory protein UreG|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PTSYLNC 9
PT++ NC
Sbjct: 180 PTAFTNC 186


>sp|Y1060_METJA|UNCHARACTERIZED protein MJ1060|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGPTSYLNCF 10
P P YLN F
Sbjct: 445 PHPGEYLNDF 454


>sp|YD5A_METJA|UNCHARACTERIZED protein MJ1351.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PTSYLNCF 10
PT Y +C+
Sbjct: 45 PTKYKDCY 52


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 2 GPTSYLN 8
GPT +LN
Sbjct: 173 GPTGWLN 179




38|SequenceR|195|186|LLRIAPGPTS

>sp|FSX1_HALSH|FUSEXIN 1|Haloplanus natans (strain DSM 17983

Query: 3 RIAPGPTS 10
R+APG T+
Sbjct: 412 RVAPGETA 419


>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LRIAPGP 8
LRIAP P
Sbjct: 108 LRIAPNP 114


>sp|MTD_METMA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 5 APGPTS 10
APGPT+
Sbjct: 73 APGPTA 78


>sp|MTD_METAC|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 5 APGPTS 10
APGPT+
Sbjct: 73 APGPTA 78




39|SequenceR|200|191|PRKAYLLRIA

>sp|CEDB_SULAC|DNA import protein CedB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 KAYLLRI 9
KAYLLRI
Sbjct: 410 KAYLLRI 416


>sp|SRP54_METKA|SIGNAL recognition particle 54 kDa|Methanopyrus kandleri (strain AV19 /

Query: 1 PRKAYLLRI 9
P++ YLLRI
Sbjct: 68 PKRDYLLRI 76


>sp|RAD50_SACS2|DNA double-strand break repair Rad50|Saccharolobus solfataricus (strain

Query: 2 RKAYLLRI 9
RKAYL+ I
Sbjct: 814 RKAYLIEI 821


>sp|Y887_METTH|UPF0104 membrane protein MTH_887|Methanothermobacter thermautotrophicus

Query: 1 PRKAYLLR 8
P +AYLLR
Sbjct: 111 PLRAYLLR 118




40|SequenceR|205|196|SLGIGPRKAY

>sp|PYRDB_PYRFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus furiosus (strain

Query: 1 SLGIGPRKAY 10
S+GI PRK Y
Sbjct: 45 SIGIEPRKGY 54


>sp|PYRDB_THEKO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermococcus kodakarensis

Query: 1 SLGIGPRKAY 10
S+GI PRK Y
Sbjct: 48 SIGIEPRKGY 57


>sp|FEN_META3|FLAP endonuclease 1|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GIGPRKA 9
GIGP+KA
Sbjct: 232 GIGPKKA 238


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SLGIGPRKAY 10
SLG+ P+KA+
Sbjct: 484 SLGMKPQKAF 493


>sp|BPSA_THEKO|N(4)-BIS(AMINOPROPYL)SPERMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GIGPRKAY 10
GIGPR Y
Sbjct: 82 GIGPRADY 89


>sp|DPO4_METAC|DNA polymerase IV|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SLGIGPRK 8
S+GIGP K
Sbjct: 151 SIGIGPNK 158


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 LGIGPRKA 9
LGIG RKA
Sbjct: 269 LGIGTRKA 276


>sp|NADE_METKA|NH(3)-DEPENDENT NAD(+) synthetase|Methanopyrus kandleri (strain AV19 /

Query: 3 GIGPRKA 9
G+GPRKA
Sbjct: 230 GLGPRKA 236


>sp|DPO41_METMA|DNA polymerase IV 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SLGIGPRK 8
S+GIGP K
Sbjct: 150 SIGIGPNK 157


>sp|RL3_HALMA|LARGE ribosomal subunit protein uL3|Haloarcula marismortui (strain ATCC

Query: 1 SLGIGPRK 8
SLG GPRK
Sbjct: 11 SLGFGPRK 18


>sp|PYRDB_PYRAB|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus abyssi (strain GE5

Query: 1 SLGIGPRKAY 10
S+G+ PRK Y
Sbjct: 44 SIGMEPRKGY 53


>sp|PGK2_METKA|2-PHOSPHOGLYCERATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 SLGIGPRKAY 10
++G+ P KAY
Sbjct: 49 AIGVEPHKAY 58


>sp|PTH_METBU|PEPTIDYL-TRNA hydrolase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LGIGPRKA 9
LGIGP +A
Sbjct: 95 LGIGPARA 102


>sp|FEN_THEKO|FLAP endonuclease 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GIGPRKA 9
GIGP+KA
Sbjct: 244 GIGPKKA 250


>sp|FEN_PYRAB|FLAP endonuclease 1|Pyrococcus abyssi (strain GE5 /

Query: 3 GIGPRKA 9
GIGP+KA
Sbjct: 244 GIGPKKA 250


>sp|FEN_METKA|FLAP endonuclease 1|Methanopyrus kandleri (strain AV19 /

Query: 3 GIGPRKA 9
GIGP++A
Sbjct: 242 GIGPKRA 248


>sp|FEN_THEON|FLAP endonuclease 1|Thermococcus onnurineus (strain NA1)

Query: 3 GIGPRKA 9
GIGP+KA
Sbjct: 244 GIGPKKA 250


>sp|FEN_THEGJ|FLAP endonuclease 1|Thermococcus gammatolerans (strain DSM 15229

Query: 3 GIGPRKA 9
GIGP+KA
Sbjct: 244 GIGPKKA 250


>sp|FEN_PYRHO|FLAP endonuclease 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GIGPRKA 9
GIGP+KA
Sbjct: 244 GIGPKKA 250


>sp|FEN_STAMF|FLAP endonuclease 1|Staphylothermus marinus (strain ATCC 43588

Query: 3 GIGPRKA 9
GIGP+KA
Sbjct: 248 GIGPKKA 254


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LGIGPRKAY 10
LG+ PR A+
Sbjct: 486 LGLNPRDAF 494


>sp|FEN_THESM|FLAP endonuclease 1|Thermococcus sibiricus (strain DSM 12597

Query: 3 GIGPRKA 9
G+GP+KA
Sbjct: 244 GLGPKKA 250


>sp|FEN_PYRIL|FLAP endonuclease 1|Pyrobaculum islandicum (strain DSM 4184

Query: 3 GIGPRKA 9
G+GP+KA
Sbjct: 247 GVGPQKA 253


>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SLGIGPRKAY 10
LGIGP A+
Sbjct: 454 DLGIGPDAAF 463


>sp|DPO42_METMA|DNA polymerase IV 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SLGIGPRK 8
S+G+GP K
Sbjct: 155 SVGVGPNK 162


>sp|FEN_PYRCJ|FLAP endonuclease 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GIGPRKA 9
G+GP+KA
Sbjct: 247 GVGPQKA 253


>sp|Y309_METBU|UPF0280 protein Mbur_0309|Methanococcoides burtonii (strain DSM 6242

Query: 1 SLGIGPRKA 9
S+GIGP A
Sbjct: 72 SVGIGPMSA 80


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 2 LGIGPRKA 9
LG+G RKA
Sbjct: 265 LGLGTRKA 272


>sp|GVPH_HALMT|GAS vesicle protein H|Haloferax mediterranei (strain ATCC 33500

Query: 1 SLGIGPR 7
S G+GPR
Sbjct: 96 SFGLGPR 102


>sp|GLMS_PYRHO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus horikoshii (strain ATCC

Query: 4 IGPRKA 9
IGPRKA
Sbjct: 8 IGPRKA 13


>sp|PTH_METM7|PEPTIDYL-TRNA hydrolase|Methanococcus maripaludis (strain C7 /

Query: 1 SLGIGPRK 8
++GIGP K
Sbjct: 95 AVGIGPEK 102


>sp|PTH_METBF|PEPTIDYL-TRNA hydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LGIGPRK 8
LGIGP K
Sbjct: 95 LGIGPAK 101


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 2 LGIGPRKA 9
LG+G RKA
Sbjct: 266 LGLGTRKA 273


>sp|GLMS_PYRAB|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus abyssi (strain GE5 /

Query: 4 IGPRKA 9
IGPRKA
Sbjct: 8 IGPRKA 13


>sp|FEN_PYRNV|FLAP endonuclease 1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 GIGPRKA 9
G+GP+KA
Sbjct: 247 GVGPQKA 253


>sp|PTH_METM6|PEPTIDYL-TRNA hydrolase|Methanococcus maripaludis (strain C6 /

Query: 1 SLGIGPRK 8
++GIGP K
Sbjct: 95 AVGIGPEK 102


>sp|PTH_METM5|PEPTIDYL-TRNA hydrolase|Methanococcus maripaludis (strain C5 /

Query: 1 SLGIGPRK 8
++GIGP K
Sbjct: 95 AVGIGPEK 102


>sp|PTH_METAC|PEPTIDYL-TRNA hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LGIGPRK 8
LGIGP K
Sbjct: 95 LGIGPAK 101


>sp|RL32_HALSA|LARGE ribosomal subunit protein eL32|Halobacterium salinarum (strain

Query: 3 GIGPRKA 9
G+GP KA
Sbjct: 16 GVGPSKA 22


>sp|PTH_METVS|PEPTIDYL-TRNA hydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SLGIGPRK 8
++GIGP K
Sbjct: 95 AVGIGPEK 102


>sp|PTH_METMP|PEPTIDYL-TRNA hydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SLGIGPRK 8
++GIGP K
Sbjct: 95 AVGIGPEK 102


>sp|FEN_PYRAE|FLAP endonuclease 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GIGPRKA 9
G+GP+KA
Sbjct: 247 GVGPQKA 253


>sp|Y2739_METHJ|UPF0758 protein Mhun_2739|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GIGPRKA 9
GIGP KA
Sbjct: 73 GIGPTKA 79


>sp|PURA_METBU|ADENYLOSUCCINATE synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SLGIGPRK 8
+LG+GP K
Sbjct: 250 NLGVGPTK 257


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 LGIGPRKAY 10
LGIGP Y
Sbjct: 58 LGIGPNLLY 66


>sp|PTH_METMA|PEPTIDYL-TRNA hydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LGIGPRK 8
LGIGP K
Sbjct: 95 LGIGPAK 101


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SLGIGPRK 8
+LGIGP K
Sbjct: 359 NLGIGPGK 366


>sp|RL3_STAMF|LARGE ribosomal subunit protein uL3|Staphylothermus marinus (strain

Query: 1 SLGIGPRK 8
SLG+ PRK
Sbjct: 13 SLGVRPRK 20


>sp|DPO4_METS5|DNA polymerase IV|Metallosphaera sedula (strain ATCC 51363

Query: 1 SLGIGPRKA 9
++GIGP K
Sbjct: 141 TVGIGPNKV 149


>sp|DNLI_METPE|DNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 LGIGPRKAY 10
LGIGP Y
Sbjct: 58 LGIGPNLLY 66


>sp|Y382_METBU|UPF0758 protein Mbur_0382|Methanococcoides burtonii (strain DSM 6242

Query: 3 GIGPRKA 9
GIGP KA
Sbjct: 77 GIGPAKA 83


>sp|RL3_PYRFU|LARGE ribosomal subunit protein uL3|Pyrococcus furiosus (strain ATCC

Query: 1 SLGIGPRK 8
SLG PRK
Sbjct: 11 SLGFSPRK 18


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC

Query: 1 SLGIGPRK 8
SLG PRK
Sbjct: 13 SLGFSPRK 20


>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LGIGPRKAY 10
LG+GP Y
Sbjct: 58 LGVGPNLLY 66


>sp|RL32_HALMA|LARGE ribosomal subunit protein eL32|Haloarcula marismortui (strain

Query: 3 GIGPRKA 9
G+GP KA
Sbjct: 22 GVGPSKA 28


>sp|PYRDB_PYRHO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus horikoshii (strain

Query: 1 SLGIGPRKAY 10
S+G PRK Y
Sbjct: 48 SIGKEPRKGY 57




41|SequenceR|210|201|RRHSPSLGIG

>sp|ARGC_METVS|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 RHSPSLG 8
RHSP +G
Sbjct: 207 RHSPEIG 213


>sp|ARGC_METMP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 2 RHSPSLG 8
RHSP +G
Sbjct: 208 RHSPEIG 214


>sp|ARGC_METM6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C6 /

Query: 2 RHSPSLG 8
RHSP +G
Sbjct: 208 RHSPEIG 214


>sp|ARGC_METM7|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C7 /

Query: 2 RHSPSLG 8
RHSP +G
Sbjct: 208 RHSPEIG 214


>sp|ARGC_METM5|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C5 /

Query: 2 RHSPSLG 8
RHSP +G
Sbjct: 208 RHSPEIG 214


>sp|WECC_PYRHO|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 HSPSLGIG 10
H+P +G+G
Sbjct: 248 HTPGIGVG 255


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 HSPSLGIG 10
+SPSLG G
Sbjct: 1170 YSPSLGPG 1177


>sp|DNPH1_THEPD|PUTATIVE 2'-deoxynucleoside 5'-phosphate N-hydrolase 1|Thermofilum pendens

Query: 5 PSLGIG 10
PSLG+G
Sbjct: 75 PSLGVG 80


>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 3 HSPSLGI 9
H PS+G+
Sbjct: 146 HKPSIGV 152


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM

Query: 1 RRHSPSLGI 9
RRH SLG+
Sbjct: 81 RRHVKSLGL 89


>sp|SYY_METMJ|TYROSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RRHSPSLG 8
R H PS+G
Sbjct: 182 REHLPSIG 189




42|SequenceR|215|206|MYGLYRRHSP

>sp|AMT2_ARCFU|AMMONIUM transporter Amt2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YGLYRRHSP 10
YGLY SP
Sbjct: 375 YGLYATESP 383


>sp|CARA_SACS2|CARBAMOYL phosphate synthase small chain|Saccharolobus solfataricus (strain

Query: 1 MYGLYRR 7
+YGLY+R
Sbjct: 195 LYGLYKR 201


>sp|Y1037_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 5 YRRHSP 10
YR HSP
Sbjct: 129 YRHHSP 134


>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 MYGLYRRHSP 10
MYG Y SP
Sbjct: 297 MYGEYATQSP 306


>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 MYGLYRRHSP 10
MYG Y SP
Sbjct: 297 MYGEYATQSP 306


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 YRRHSP 10
YRRH P
Sbjct: 416 YRRHYP 421


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 5 YRRHSP 10
YRRH P
Sbjct: 424 YRRHFP 429


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 5 YRRHSP 10
YRRH P
Sbjct: 420 YRRHYP 425


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 MYGLYRRH 8
MY + RRH
Sbjct: 493 MYSILRRH 500


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YGLYRRH 8
YG Y RH
Sbjct: 38 YGFYIRH 44




43|SequenceR|220|211|ALLDCMYGLY

>sp|GVPN_HALMT|GAS vesicle ATPase GvpN|Haloferax mediterranei (strain ATCC 33500

Query: 1 ALLDCMYGLY 10
ALLD + GLY
Sbjct: 235 ALLDRLVGLY 244


>sp|TRUA_METMP|TRNA pseudouridine synthase A|Methanococcus maripaludis (strain DSM

Query: 1 ALLDCMY 7
ALLDC Y
Sbjct: 30 ALLDCGY 36


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 ALLDCMYGLY 10
A+L C GLY
Sbjct: 447 AILQCESGLY 456


>sp|TRUA_METM6|TRNA pseudouridine synthase A|Methanococcus maripaludis (strain C6 /

Query: 1 ALLDCMY 7
ALLDC Y
Sbjct: 30 ALLDCGY 36


>sp|GVPN1_HALSA|GAS vesicle ATPase GvpN1|Halobacterium salinarum (strain ATCC 700922

Query: 1 ALLDCMYGLY 10
ALLD + G+Y
Sbjct: 235 ALLDRLIGIY 244


>sp|HTAXP_HALS3|HEAT repeat-containing taxis protein OE_2401F|Halobacterium salinarum

Query: 2 LLDCMYG 8
L+DC++G
Sbjct: 162 LVDCLHG 168




44|SequenceR|225|216|RYPKDALLDC

>sp|TPIS_METTH|TRIOSEPHOSPHATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PKDALLD 9
P+DALLD
Sbjct: 218 PRDALLD 224


>sp|Y811_SULTO|RUTC family protein STK_08110|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RYPKDALLD 9
R PKDAL++
Sbjct: 109 RLPKDALIE 117


>sp|G3P_PYRAR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 YPKDALLD 9
YP+DA+L+
Sbjct: 233 YPRDAVLE 240


>sp|GVPN1_HALSA|GAS vesicle ATPase GvpN1|Halobacterium salinarum (strain ATCC 700922

Query: 3 PKDALLD 9
P+DALLD
Sbjct: 232 PQDALLD 238


>sp|GVPN_HALMT|GAS vesicle ATPase GvpN|Haloferax mediterranei (strain ATCC 33500

Query: 3 PKDALLD 9
P+DALLD
Sbjct: 232 PQDALLD 238


>sp|TPIS_METS3|TRIOSEPHOSPHATE isomerase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 RYPKDALLD 9
+ PK+ALLD
Sbjct: 209 KNPKEALLD 217


>sp|GVPN2_HALSA|GAS vesicle ATPase GvpN2|Halobacterium salinarum (strain ATCC 700922

Query: 3 PKDALLD 9
P+DALLD
Sbjct: 230 PQDALLD 236


>sp|COBQ_METB6|PROBABLE cobyric acid synthase|Methanoregula boonei (strain DSM 21154

Query: 2 YPKDALLDC 10
YP LLDC
Sbjct: 347 YPGLGLLDC 355


>sp|TPIS_METKA|TRIOSEPHOSPHATE isomerase|Methanopyrus kandleri (strain AV19 /

Query: 3 PKDALLD 9
PK+ALLD
Sbjct: 214 PKEALLD 220


>sp|AMZA_SULAC|ARCHAEMETZINCIN acidocaldarius (strain ATCC 33909

Query: 1 RYPKDALL 8
RYP DA++
Sbjct: 67 RYPYDAVI 74


>sp|RPO11_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus shibatae (strain ATCC

Query: 3 PKDALL 8
PKDALL
Sbjct: 65 PKDALL 70


>sp|RPO11_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus solfataricus (strain

Query: 3 PKDALL 8
PKDALL
Sbjct: 65 PKDALL 70


>sp|RPO11_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 3 PKDALL 8
PKDALL
Sbjct: 65 PKDALL 70


>sp|RPO11_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 3 PKDALL 8
PKDALL
Sbjct: 65 PKDALL 70


>sp|RPO11_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 3 PKDALL 8
PKDALL
Sbjct: 65 PKDALL 70


>sp|RPO11_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 3 PKDALL 8
PKDALL
Sbjct: 65 PKDALL 70


>sp|RPO11_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 3 PKDALL 8
PKDALL
Sbjct: 65 PKDALL 70


>sp|RPO11_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 3 PKDALL 8
PKDALL
Sbjct: 65 PKDALL 70


>sp|HIS3_METTH|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanothermobacter thermautotrophicus (strain

Query: 4 KDALLDC 10
KD L+DC
Sbjct: 80 KDVLVDC 86


>sp|Y854_PYRHO|RUTC family protein PH0854|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RYPKDALLD 9
R PKD L++
Sbjct: 110 RLPKDVLIE 118


>sp|Y1251_PYRAB|RUTC family protein PYRAB12510|Pyrococcus abyssi (strain GE5 /

Query: 1 RYPKDALLD 9
R PKD L++
Sbjct: 111 RLPKDVLIE 119


>sp|RIDA_PYRFU|2-IMINOBUTANOATE/2-IMINOPROPANOATE deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RYPKDALLD 9
R PKD L++
Sbjct: 110 RLPKDVLIE 118


>sp|Y1204_ARCFU|UNCHARACTERIZED protein AF_1204|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YPKDALLDC 10
+P D +L C
Sbjct: 2 FPADVILQC 10


>sp|AMPD_METSM|ANHYDROMEVALONATE phosphate decarboxylase|Methanobrevibacter smithii

Query: 1 RYPKDALL 8
+YPKD ++
Sbjct: 27 KYPKDTVI 34


>sp|GLNB4_METBA|NITROGEN fixation nifHD2 region GlnB-like|Methanosarcina barkeri

Query: 4 KDALLDC 10
KD LL+C
Sbjct: 17 KDVLLEC 23


>sp|METK_METJA|S-ADENOSYLMETHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KDALLDC 10
KD ++DC
Sbjct: 132 KDVIIDC 138




45|SequenceR|230|221|PKFHPRYPKD

>sp|PPS_METJA|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKFHPRY 7
PK HPRY
Sbjct: 10 PKTHPRY 16


>sp|PPS_THEON|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus onnurineus (strain NA1)

Query: 1 PKFHPRY 7
PK HPRY
Sbjct: 5 PKSHPRY 11


>sp|PPS_THEKO|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PKFHPRY 7
PK HPRY
Sbjct: 5 PKSHPRY 11


>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 1 PKFHPRYPK 9
PK+HP + K
Sbjct: 153 PKYHPAFAK 161


>sp|TRPD_METKA|ANTHRANILATE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 PKFHP 5
PKFHP
Sbjct: 151 PKFHP 155


>sp|TRPD_METBU|ANTHRANILATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 PKFHP 5
PKFHP
Sbjct: 152 PKFHP 156


>sp|PPS_METHJ|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PKFHPRY 7
P+ HPRY
Sbjct: 3 PESHPRY 9


>sp|TRPD_PYRIL|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PKFHPRYPK 9
P++HP + K
Sbjct: 151 PRYHPAFAK 159


>sp|TRPD_PYRAR|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PKFHPRYPK 9
P++HP + K
Sbjct: 153 PRYHPAFAK 161


>sp|TRPD_PYRAE|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PKFHPRYPK 9
PK+HP + +
Sbjct: 153 PKYHPAFAR 161


>sp|RNP3_PYRAB|RIBONUCLEASE P protein component 3|Pyrococcus abyssi (strain GE5 /

Query: 2 KFHPRYPKD 10
K+H R+P+D
Sbjct: 173 KWHIRWPRD 181


>sp|SYFB_METPE|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaerula palustris (strain ATCC

Query: 4 HPRYP 8
HPRYP
Sbjct: 189 HPRYP 193


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 KFHPRYPK 9
K+HP+Y K
Sbjct: 450 KYHPKYRK 457


>sp|AATB1_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 KFHPRYPK 9
K+HP+Y K
Sbjct: 450 KYHPKYRK 457


>sp|AATB_METJA|A-TYPE ATP synthase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KFHPRYPK 9
K+HP+Y K
Sbjct: 457 KYHPKYRK 464


>sp|THSA_THEKO|CHAPERONIN subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 HPRYPK 9
HPR PK
Sbjct: 227 HPRMPK 232


>sp|THSA_THEK8|CHAPERONIN subunit alpha|Thermococcus sp. (strain KS-8)

Query: 4 HPRYPK 9
HPR PK
Sbjct: 227 HPRMPK 232


>sp|THSA_THEK1|CHAPERONIN subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 4 HPRYPK 9
HPR PK
Sbjct: 227 HPRMPK 232


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 1 PKFHPRYPKD 10
P HP PKD
Sbjct: 359 PPGHPEIPKD 368


>sp|AATB_HYPBU|A-TYPE ATP synthase subunit B|Hyperthermus butylicus (strain DSM 5456

Query: 2 KFHPRYPK 9
K+HP+Y K
Sbjct: 460 KYHPKYRK 467


>sp|TRPD_METM6|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 PKFHPRYPK 9
PK+HP K
Sbjct: 144 PKYHPTLKK 152


>sp|PURP_METBF|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina barkeri (strain Fusaro

Query: 1 PKFHPRYPK 9
PKF+ +PK
Sbjct: 52 PKFYEAFPK 60


>sp|TRUA_METPE|TRNA pseudouridine synthase A|Methanosphaerula palustris (strain ATCC

Query: 1 PKFHPRY 7
P FHPR+
Sbjct: 97 PSFHPRF 103


>sp|PURP_METAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina acetivorans (strain

Query: 1 PKFHPRYPK 9
PKF+ +PK
Sbjct: 52 PKFYEAFPK 60


>sp|CDPAS_PYRAR|CDP-ARCHAEOL synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PKFHPRYPKD 10
P+ HP +P D
Sbjct: 104 PRGHPAFPLD 113


>sp|TRPD_METVS|ANTHRANILATE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 PKFHPRYPK 9
PK+HP K
Sbjct: 144 PKYHPALKK 152


>sp|TRPD_METM7|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 PKFHPRYPK 9
PK+HP K
Sbjct: 144 PKYHPALKK 152


>sp|AATB_PYRAB|A-TYPE ATP synthase subunit B|Pyrococcus abyssi (strain GE5 /

Query: 2 KFHPRYPK 9
K+HP+Y K
Sbjct: 452 KYHPKYRK 459


>sp|AATB_PYRHO|A-TYPE ATP synthase subunit B|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KFHPRYPK 9
K+HP+Y K
Sbjct: 455 KYHPKYRK 462


>sp|CDPAS_PYRAE|CDP-ARCHAEOL synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PKFHPRYPKD 10
P+ HP +P D
Sbjct: 104 PRGHPAFPLD 113


>sp|AATB_ARCFU|A-TYPE ATP synthase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KFHPRYPK 9
K+HP+Y K
Sbjct: 450 KYHPKYRK 457


>sp|AATB_DESSY|A-TYPE ATP synthase subunit B|Desulfurococcus sp. (strain SY)

Query: 2 KFHPRYPK 9
K+HP+Y K
Sbjct: 453 KYHPKYRK 460


>sp|AATB_THEON|A-TYPE ATP synthase subunit B|Thermococcus onnurineus (strain NA1)

Query: 2 KFHPRYPK 9
K+HP+Y K
Sbjct: 455 KYHPKYRK 462


>sp|PPS_METMA|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PKFHPRY 7
P HPRY
Sbjct: 5 PHDHPRY 11


>sp|AATB_THEKO|A-TYPE ATP synthase subunit B|Thermococcus kodakarensis (strain ATCC

Query: 2 KFHPRYPK 9
K+HP+Y K
Sbjct: 455 KYHPKYRK 462


>sp|AATB_THEGJ|A-TYPE ATP synthase subunit B|Thermococcus gammatolerans (strain DSM 15229

Query: 2 KFHPRYPK 9
K+HP+Y K
Sbjct: 453 KYHPKYRK 460


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 KFHPRY 7
K+HP+Y
Sbjct: 976 KYHPKY 981


>sp|AATB_THESI|A-TYPE ATP synthase subunit B|Thermococcus sp. (strain KI)

Query: 2 KFHPRYPK 9
K+HP+Y K
Sbjct: 453 KYHPKYRK 460


>sp|PURQ_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanothrix thermoacetophila (strain DSM

Query: 1 PKFHPRYP 8
P+ HPR P
Sbjct: 234 PRKHPRIP 241


>sp|AATB_AERPE|A-TYPE ATP synthase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 2 KFHPRY 7
K+HP+Y
Sbjct: 455 KYHPKY 460


>sp|AATB_IGNH4|A-TYPE ATP synthase subunit B|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KFHPRY 7
K+HP+Y
Sbjct: 458 KYHPKY 463


>sp|RS6E_STAMF|SMALL ribosomal subunit protein eS6|Staphylothermus marinus (strain ATCC

Query: 1 PKFHPR 6
P FHPR
Sbjct: 182 PGFHPR 187


>sp|TRUA_METMJ|TRNA pseudouridine synthase A|Methanoculleus marisnigri (strain ATCC

Query: 3 FHPRY 7
FHPRY
Sbjct: 99 FHPRY 103


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 2 KFHPRY 7
K+HP+Y
Sbjct: 451 KYHPKY 456


>sp|AATB_THEPD|A-TYPE ATP synthase subunit B|Thermofilum pendens (strain DSM 2475

Query: 2 KFHPRY 7
K+HP+Y
Sbjct: 453 KYHPKY 458


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 4 HPRYPK 9
H RYPK
Sbjct: 100 HKRYPK 105


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 3 FHPRYPKD 10
F+P+YP +
Sbjct: 477 FNPKYPPN 484


>sp|GPMA_METPE|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 1 PKFHPRY 7
P+F PRY
Sbjct: 132 PRFDPRY 138


>sp|PURP1_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 1|Methanosarcina mazei (strain ATCC

Query: 1 PKFHPRYPK 9
PKF+ +P+
Sbjct: 52 PKFYEAFPR 60


>sp|GPMA_METB6|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanoregula boonei (strain DSM 21154

Query: 1 PKFHPRY 7
P+F PRY
Sbjct: 132 PRFDPRY 138


>sp|AATB_PYRFU|A-TYPE ATP synthase subunit B|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KFHPRY 7
K+HP+Y
Sbjct: 452 KYHPKY 457


>sp|AATB_STAMF|A-TYPE ATP synthase subunit B|Staphylothermus marinus (strain ATCC 43588

Query: 2 KFHPRY 7
K+HP+Y
Sbjct: 458 KYHPKY 463


>sp|DPHB_METHJ|DIPHTHINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PKFHPRYPKD 10
PK+ P+ P D
Sbjct: 140 PKWFPKTPLD 149


>sp|PURP2_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 2|Methanosarcina mazei (strain ATCC

Query: 1 PKFHPRYPK 9
PKF+ +P+
Sbjct: 52 PKFYDAFPR 60


>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 2 KFHPRY 7
K+HP Y
Sbjct: 454 KYHPNY 459


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 KFHPRY 7
K+HP Y
Sbjct: 454 KYHPNY 459


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 2 KFHPRY 7
K+HP Y
Sbjct: 454 KYHPNY 459


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 2 KFHPRY 7
K+HP Y
Sbjct: 454 KYHPNY 459


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 2 KFHPRY 7
K+HP Y
Sbjct: 454 KYHPNY 459


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 KFHPRY 7
K+HP Y
Sbjct: 454 KYHPNY 459


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 KFHPRY 7
K+HP Y
Sbjct: 454 KYHPNY 459


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KFHPRY 7
K+HP Y
Sbjct: 457 KYHPNY 462


>sp|AATB_SULTO|A-TYPE ATP synthase subunit B|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KFHPRY 7
K+HP Y
Sbjct: 456 KYHPNY 461


>sp|RS6E_HYPBU|SMALL ribosomal subunit protein eS6|Hyperthermus butylicus (strain DSM

Query: 1 PKFHPR 6
P FHPR
Sbjct: 180 PGFHPR 185


>sp|RL21_HALMA|LARGE ribosomal subunit protein eL21|Haloarcula marismortui (strain

Query: 2 KFHPRY 7
+FHPR+
Sbjct: 52 RFHPRF 57


>sp|PURP_METBU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcoides burtonii (strain DSM

Query: 1 PKFHPRYPK 9
P+F+ +PK
Sbjct: 52 PRFYDAFPK 60




46|SequenceR|235|226|SKITLPKFHP

>sp|TRPD_METKA|ANTHRANILATE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 6 PKFHP 10
PKFHP
Sbjct: 151 PKFHP 155


>sp|TRPD_METBU|ANTHRANILATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 6 PKFHP 10
PKFHP
Sbjct: 152 PKFHP 156


>sp|RIO2_METJA|RIO-TYPE serine/threonine-protein kinase Rio2|Methanocaldococcus jannaschii

Query: 5 LPKFHP 10
+PK+HP
Sbjct: 225 VPKYHP 230


>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 6 PKFHP 10
PK+HP
Sbjct: 153 PKYHP 157


>sp|TRPD_PYRAE|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 6 PKFHP 10
PK+HP
Sbjct: 153 PKYHP 157


>sp|TRPD_METVS|ANTHRANILATE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 6 PKFHP 10
PK+HP
Sbjct: 144 PKYHP 148


>sp|TRPD_METM6|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 6 PKFHP 10
PK+HP
Sbjct: 144 PKYHP 148


>sp|TRPD_METM7|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 6 PKFHP 10
PK+HP
Sbjct: 144 PKYHP 148


>sp|PPS_THEKO|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 ITLPKFHP 10
+ +PK HP
Sbjct: 2 VNIPKSHP 9


>sp|FKBPL_METJA|LONG-TYPE peptidyl-prolyl cis-trans isomerase|Methanocaldococcus jannaschii

Query: 2 KITLPKFHP 10
KI LP+F P
Sbjct: 180 KIELPEFAP 188


>sp|Y1620_METJA|UNCHARACTERIZED protein MJ1620|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KITLPKFHP 10
KIT+ KF P
Sbjct: 394 KITVYKFRP 402


>sp|DCD_SACS2|DCTP deaminase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 ITLPKFH 9
+TLPKF+
Sbjct: 165 VTLPKFN 171


>sp|NSUN6_PYRHO|TRNA (cytosine(72)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 2 KITLPKF 8
++TLPKF
Sbjct: 161 EVTLPKF 167


>sp|Y1782_THEKO|UNCHARACTERIZED serpin-like protein TK1782|Thermococcus kodakarensis (strain ATCC

Query: 2 KITLPKF 8
K+ LPKF
Sbjct: 313 KVALPKF 319


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 1 SKITLPKFHP 10
SK+ K+HP
Sbjct: 235 SKVHAGKYHP 244




47|SequenceR|240|231|PSVTISKITL

***** No hits found ******


48|SequenceR|245|236|NFFPIPSVTI

>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NFFPIPSV 8
+F+P+PSV
Sbjct: 307 DFYPVPSV 314


>sp|IF2A_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 1 NFFPIPSVTI 10
N+ +P+VTI
Sbjct: 169 NYVEVPTVTI 178


>sp|IF2A_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 NFFPIPSVTI 10
N+ +P+VTI
Sbjct: 169 NYVEVPTVTI 178


>sp|IF2A_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 NFFPIPSVTI 10
N+ +P+VTI
Sbjct: 169 NYVEVPTVTI 178


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 3 FPIPSVT 9
P+PSVT
Sbjct: 414 LPVPSVT 420


>sp|DTDA_METBF|D-AMINOACYL-TRNA deacylase|Methanosarcina barkeri (strain Fusaro /

Query: 4 PIPSVTI 10
PIP +TI
Sbjct: 21 PIPKITI 27


>sp|BIOD_NITMS|ATP-DEPENDENT dethiobiotin synthetase BioD|Nitrosopumilus maritimus (strain

Query: 1 NFFPIPS 7
FFPIP+
Sbjct: 73 QFFPIPA 79




49|SequenceR|250|241|GNRQKNFFPI

>sp|FLPA_METAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina acetivorans (strain

Query: 1 GNRQKNFFPI 10
+R+KN FPI
Sbjct: 113 ASRRKNIFPI 122


>sp|FLPA_METMA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina mazei (strain ATCC

Query: 1 GNRQKNFFPI 10
+R+KN FPI
Sbjct: 113 ASRRKNIFPI 122


>sp|FLPA_METMZ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina mazei

Query: 1 GNRQKNFFPI 10
+R+KN FPI
Sbjct: 113 ASRRKNIFPI 122


>sp|TF2B_METKA|TRANSCRIPTION initiation factor IIB|Methanopyrus kandleri (strain AV19 /

Query: 1 GNRQKNFF 8
G+R++NFF
Sbjct: 112 GSRERNFF 119


>sp|DPHB_METPE|DIPHTHINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 QKNFFPI 10
QKN+FP+
Sbjct: 139 QKNWFPL 145


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GNRQKNFFP 9
GNR + F+P
Sbjct: 307 GNRIEEFYP 315


>sp|Y966_METJA|UNCHARACTERIZED protein MJ0966|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KNFFPI 10
+NFFPI
Sbjct: 95 ENFFPI 100


>sp|RL21_METVS|LARGE ribosomal subunit protein eL21|Methanococcus vannielii (strain

Query: 3 RQKNFFPI 10
RQK FP+
Sbjct: 20 RQKGLFPL 27




50|SequenceR|255|246|CYPRCGNRQK

>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 3 PRCGNRQK 10
P+CG+R K
Sbjct: 636 PKCGSRSK 643


>sp|HMGCS_THESM|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus sibiricus (strain DSM 12597

Query: 2 YPRCGNR 8
YPR GNR
Sbjct: 198 YPRHGNR 204


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 2 YPRCGNR 8
YPR GNR
Sbjct: 198 YPRHGNR 204


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YPRCGNR 8
YPR GNR
Sbjct: 198 YPRHGNR 204


>sp|HMGCS_THEGJ|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 YPRCGNR 8
YPR GNR
Sbjct: 198 YPRHGNR 204


>sp|HMGCS_PYRHO|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YPRCGNR 8
YPR GNR
Sbjct: 198 YPRHGNR 204


>sp|HMGCS_PYRFU|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YPRCGNR 8
YPR GNR
Sbjct: 198 YPRHGNR 204


>sp|HMGCS_PYRAB|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 YPRCGNR 8
YPR GNR
Sbjct: 198 YPRHGNR 204


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PRCGNR 8
PRCG+R
Sbjct: 740 PRCGSR 745


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PRCGNR 8
PRCG+R
Sbjct: 739 PRCGSR 744


>sp|RS27_AERPE|SMALL ribosomal subunit protein eS27|Aeropyrum pernix (strain ATCC

Query: 3 PRCGNRQ 9
P+CGNRQ
Sbjct: 29 PKCGNRQ 35


>sp|HYPA_METS3|HYDROGENASE maturation factor HypA|Methanobrevibacter smithii (strain ATCC

Query: 3 PRCGNRQ 9
P+CGN++
Sbjct: 97 PKCGNKR 103


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 3 PRCGNR 8
P+CG+R
Sbjct: 739 PKCGSR 744


>sp|HYPA_THEON|HYDROGENASE maturation factor HypA|Thermococcus onnurineus (strain NA1)

Query: 3 PRCGNR 8
P+CG+R
Sbjct: 111 PKCGSR 116


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 YPRCGNRQK 10
+PR GN+ K
Sbjct: 262 HPRLGNKYK 270


>sp|TRUB_PYRIL|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum islandicum (strain

Query: 4 RCGNRQ 9
+CGNR+
Sbjct: 2 KCGNRE 7


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CYPRCGNRQ 9
C P CG+ Q
Sbjct: 184 CAPYCGSCQ 192


>sp|TF2B_METMJ|TRANSCRIPTION initiation factor IIB|Methanoculleus marisnigri (strain ATCC

Query: 3 PRCGNRQ 9
P CG+RQ
Sbjct: 42 PECGSRQ 48


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YPRCGN 7
Y RCGN
Sbjct: 427 YCRCGN 432


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YPRCGN 7
Y RCGN
Sbjct: 425 YCRCGN 430


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 YPRCGN 7
Y RCGN
Sbjct: 437 YCRCGN 442


>sp|CDRL_HALSA|TRANSCRIPTIONAL regulator CdrL|Halobacterium salinarum (strain ATCC 700922

Query: 3 PRCGNR 8
PRCG R
Sbjct: 157 PRCGRR 162


>sp|CDRL_HALS3|TRANSCRIPTIONAL regulator CdrL|Halobacterium salinarum (strain ATCC 29341

Query: 3 PRCGNR 8
PRCG R
Sbjct: 157 PRCGRR 162


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PRCGNR 8
P CGN+
Sbjct: 217 PHCGNK 222


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PRCGNR 8
P CGN+
Sbjct: 217 PHCGNK 222


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 3 PRCGNR 8
P CGN+
Sbjct: 217 PHCGNK 222


>sp|DKFP_METJA|FRUCTOSE-BISPHOSPHATE aldolase/6-deoxy-5-ketofructose 1-phosphate

Query: 2 YPRCGN 7
YP+C N
Sbjct: 216 YPKCDN 221


>sp|RF1_METS3|PEPTIDE chain release factor subunit|Methanobrevibacter smithii (strain

Query: 3 PRCGNRQK 10
P CGN ++
Sbjct: 330 PSCGNEEE 337


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain DSM

Query: 3 PRCGNR 8
P+CG+R
Sbjct: 367 PKCGSR 372


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 4 RCGNRQK 10
RCG R K
Sbjct: 504 RCGGRMK 510


>sp|TF2B_METB6|TRANSCRIPTION initiation factor IIB|Methanoregula boonei (strain DSM 21154

Query: 3 PRCGNRQ 9
P CG RQ
Sbjct: 39 PECGGRQ 45


>sp|PURP_METKA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanopyrus kandleri (strain AV19 /

Query: 1 CYPRCGNRQ 9
C P GNR+
Sbjct: 109 CVPMFGNRR 117


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 CYPRCGNRQK 10
CY G R+K
Sbjct: 408 CYASYGEREK 417


>sp|Y1230_METJA|UNCHARACTERIZED protein MJ1230|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PRCGNRQ 9
P+CGN +
Sbjct: 12 PKCGNTE 18


>sp|HYPA_METKA|HYDROGENASE maturation factor HypA|Methanopyrus kandleri (strain AV19 /

Query: 3 PRCGNR 8
P+CG+R
Sbjct: 110 PKCGSR 115


>sp|RS27_SULTO|SMALL ribosomal subunit protein eS27|Sulfurisphaera tokodaii (strain

Query: 3 PRCGNRQ 9
P CGN Q
Sbjct: 22 PNCGNEQ 28


>sp|RS27_SACS2|SMALL ribosomal subunit protein eS27|Saccharolobus solfataricus (strain

Query: 3 PRCGNRQ 9
P CGN Q
Sbjct: 22 PNCGNEQ 28




51|SequenceR|260|251|GILVDCYPRC

>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 1 GILVDCYPR 9
G DCYPR
Sbjct: 128 GYTTDCYPR 136


>sp|ASST_METAC|L-ASPARTATE semialdehyde sulfurtransferase|Methanosarcina acetivorans (strain

Query: 5 DCYPR 9
DCYPR
Sbjct: 130 DCYPR 134


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus

Query: 2 ILVDCYP 8
IL DCYP
Sbjct: 11 ILGDCYP 17


>sp|HTAXP_HALS3|HEAT repeat-containing taxis protein OE_2401F|Halobacterium salinarum

Query: 1 GILVDC 6
GILVDC
Sbjct: 160 GILVDC 165


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ILVDCYPR 9
IL+D YPR
Sbjct: 297 ILMDEYPR 304


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 ILVDCYPR 9
IL+D YPR
Sbjct: 297 ILMDEYPR 304


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ILVDCYP 8
+L++CYP
Sbjct: 337 MLMECYP 343


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 ILVDCYPR 9
+LVD +PR
Sbjct: 105 VLVDVHPR 112


>sp|KAD_METBU|ADENYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GILVDCYPRC 10
G L+D YPR
Sbjct: 80 GYLLDGYPRT 89


>sp|PPAC_METJA|MANGANESE-DEPENDENT inorganic pyrophosphatase|Methanocaldococcus jannaschii (strain

Query: 3 LVDCYP 8
+DCYP
Sbjct: 24 FLDCYP 29


>sp|GVPA_HALVU|GAS vesicle protein A|Halorubrum vacuolatum (Natronobacterium

Query: 1 GILVDCYPR 9
G++VD Y R
Sbjct: 20 GVVVDVYAR 28


>sp|HLY_HALMT|HALOLYSIN mediterranei (strain ATCC 33500

Query: 1 GILVDCY 7
GILVD Y
Sbjct: 499 GILVDSY 505


>sp|Y575_METJA|UNCHARACTERIZED protein MJ0575|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GILVDCYPR 9
G L+D YP+
Sbjct: 122 GSLIDKYPK 130


>sp|HIS3_METB6|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanoregula boonei (strain DSM 21154

Query: 2 ILVDCYPRC 10
ILVDC C
Sbjct: 70 ILVDCDEDC 78




52|SequenceR|265|256|YIKTEGILVD

>sp|AMPPA_METHJ|AMP phosphorylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 YIKTEGILVD 10
Y++T G L+D
Sbjct: 47 YVETTGTLID 56


>sp|RPO11_METVS|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus vannielii (strain ATCC

Query: 2 IKTEGILVD 10
+KTEG+L +
Sbjct: 66 LKTEGVLAE 74


>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YIKTEGILV 9
YIK +G+L+
Sbjct: 74 YIKEDGVLI 82


>sp|TRPD_METBU|ANTHRANILATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 3 KTEGILVD 10
K +GILVD
Sbjct: 69 KVDGILVD 76


>sp|RADA_METS3|DNA repair and recombination protein|Methanobrevibacter smithii (strain

Query: 2 IKTEGIL 8
IKTEGI+
Sbjct: 304 IKTEGIV 310




53|SequenceR|270|261|DTCTSYIKTE

>sp|Y883_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 3 CTSYIKTE 10
CT Y+++E
Sbjct: 90 CTGYLRSE 97


>sp|PUR5_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TCTSYIKTE 10
TC Y+K E
Sbjct: 154 TCLGYLKKE 162


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DTCTSYI 7
+TC SYI
Sbjct: 280 ETCLSYI 286




54|SequenceR|275|266|KMREFDTCTS

>sp|PUR5_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KMREFDT 7
KMR+FDT
Sbjct: 70 KMRKFDT 76


>sp|GGR_METAR|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KMREFDTC 8
KM++ +TC
Sbjct: 173 KMKDIETC 180


>sp|HYD2B_PYRFU|SULFHYDROGENASE 2 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KMREFDTC 8
+MR +D+C
Sbjct: 259 RMRRYDSC 266




55|SequenceR|280|271|QVRYEKMREF

>sp|GATE_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 VRYEKMREF 10
VRYE MR+F
Sbjct: 250 VRYEAMRQF 258


>sp|GATE_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 VRYEKMREF 10
VRYE MR+F
Sbjct: 250 VRYEAMRQF 258


>sp|GATE_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.16.4

Query: 2 VRYEKMREF 10
VRYE MR+F
Sbjct: 250 VRYEAMRQF 258


>sp|GATE_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.14.25

Query: 2 VRYEKMREF 10
VRYE MR+F
Sbjct: 250 VRYEAMRQF 258


>sp|GATE_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 VRYEKMREF 10
VRYE MR+F
Sbjct: 250 VRYEAMRQF 258


>sp|GATE_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 VRYEKMREF 10
VRYE MR+F
Sbjct: 250 VRYEAMRQF 258


>sp|KAE1B_THEAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 QVRYEKMR 8
++RYE+MR
Sbjct: 370 KIRYERMR 377


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YEKMREF 10
YEK++EF
Sbjct: 269 YEKLKEF 275


>sp|SYW_PYRCJ|TRYPTOPHAN--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 QVRYEKMREF 10
Q+ YEK+R+F
Sbjct: 340 QMLYEKIRKF 349


>sp|HTPX_THEGJ|PROTEASE HtpX homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VRYEKMRE 9
VRY MRE
Sbjct: 235 VRYRPMRE 242


>sp|GATE_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus solfataricus (strain ATCC

Query: 2 VRYEKMREF 10
VRYE +R+F
Sbjct: 250 VRYEAIRQF 258


>sp|Y355_PYRFU|VAPC ribonuclease PF0355|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RYEKMREF 10
RYE MR F
Sbjct: 119 RYEPMRRF 126


>sp|RKD4_PYRCJ|ARCADIN-4 calidifontis (strain DSM 21063

Query: 3 RYEKMREF 10
R EK+REF
Sbjct: 518 RIEKLREF 525


>sp|Y049_PYRAE|UNCHARACTERIZED serpin-like protein PAE0049|Pyrobaculum aerophilum (strain ATCC

Query: 1 QVRYEKMRE 9
++ YEK+RE
Sbjct: 238 ELTYEKLRE 246


>sp|IF2P_METAR|PROBABLE translation initiation factor IF-2|Methanocella arvoryzae (strain

Query: 3 RYEKMREF 10
RY+++R+F
Sbjct: 186 RYDRIRDF 193


>sp|RL24_PICTO|LARGE ribosomal subunit protein uL24|Picrophilus torridus (strain ATCC

Query: 3 RYEKMRE 9
RYE++RE
Sbjct: 91 RYERLRE 97


>sp|IF2P_THEPD|PROBABLE translation initiation factor IF-2|Thermofilum pendens (strain DSM

Query: 3 RYEKMREF 10
RY+++R+F
Sbjct: 188 RYDRIRDF 195


>sp|IF2P_PYRNV|PROBABLE translation initiation factor IF-2|Pyrobaculum neutrophilum (strain

Query: 3 RYEKMREF 10
RY+++R+F
Sbjct: 183 RYDRVRDF 190


>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 3 RYEKMREF 10
RY+++R+F
Sbjct: 183 RYDRVRDF 190


>sp|RS3_SACS2|SMALL ribosomal subunit protein uS3|Saccharolobus solfataricus (strain

Query: 3 RYEKMRE 9
RYEK++E
Sbjct: 143 RYEKLKE 149


>sp|RF1_ARCFU|PEPTIDE chain release factor subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 QVRYEKMREF 10
VR+E++RE
Sbjct: 178 SVRFERLREI 187


>sp|SYW_METAC|TRYPTOPHAN--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QVRYEKMREF 10
Q+ EKM+EF
Sbjct: 404 QLAAEKMQEF 413


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QVRYEKMRE 9
Q++YEK+++
Sbjct: 410 QIKYEKLKD 418


>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum (strain

Query: 3 RYEKMREF 10
RY+++R+F
Sbjct: 184 RYDRVRDF 191


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 3 RYEKMREF 10
RY+++R+F
Sbjct: 184 RYDRVRDF 191


>sp|TRMI_PYRAB|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 4 YEKMREF 10
+EK+REF
Sbjct: 204 HEKLREF 210


>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QVRYEKMREF 10
Q+ EKM+EF
Sbjct: 458 QLAAEKMQEF 467




56|SequenceR|285|276|FIKGDQVRYE

>sp|RF1_METS3|PEPTIDE chain release factor subunit|Methanobrevibacter smithii (strain

Query: 1 FIKGDQVRYE 10
F+KGD + YE
Sbjct: 230 FVKGDYLNYE 239


>sp|TRMY_ARCFU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Archaeoglobus fulgidus

Query: 1 FIKGDQVR 8
IKGD+VR
Sbjct: 159 LIKGDEVR 166


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 FIKGDQVRYE 10
FIKGD YE
Sbjct: 26 FIKGDDEVYE 35


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FIKGDQVRYE 10
FI+ +++RYE
Sbjct: 36 FIESERIRYE 45


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 3 KGDQVRY 9
+GDQ RY
Sbjct: 689 EGDQTRY 695


>sp|P152_METTH|PROTEIN MTH_152|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 FIKGDQVRY 9
F+ GD VR+
Sbjct: 176 FVVGDHVRH 184


>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 1 FIKGDQV 7
F+KGD+V
Sbjct: 268 FVKGDEV 274


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus aeolicus

Query: 1 FIKGDQV 7
FI+GD+V
Sbjct: 270 FIRGDEV 276


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 1 FIKGDQV 7
F+KGD+V
Sbjct: 278 FVKGDKV 284


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 1 FIKGDQV 7
F+KGD+V
Sbjct: 278 FVKGDKV 284


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 1 FIKGDQV 7
F+KGD+V
Sbjct: 278 FVKGDKV 284


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 1 FIKGDQV 7
F+KGD+V
Sbjct: 278 FVKGDKV 284


>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 IKGDQVRY 9
IKGD++++
Sbjct: 161 IKGDEIKF 168


>sp|SYFB_METM7|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C7 /

Query: 2 IKGDQVRY 9
IKGD++++
Sbjct: 161 IKGDEIKF 168


>sp|SYFB_METAR|PHENYLALANINE--TRNA ligase beta subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 IKGDQVRYE 10
I+GD+V +E
Sbjct: 38 IQGDEVTFE 46


>sp|SYFB_METM5|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C5 /

Query: 2 IKGDQVRY 9
IKGD++++
Sbjct: 161 IKGDEIKF 168


>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GDQVRYE 10
GDQ+R++
Sbjct: 34 GDQIRFQ 40


>sp|Y1392_METM6|UPF0200 protein MmarC6_1392|Methanococcus maripaludis (strain C6 /

Query: 4 GDQVRYE 10
GD VRYE
Sbjct: 32 GDVVRYE 38


>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 2 IKGDQVRY 9
IKGD++++
Sbjct: 161 IKGDEIKF 168


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IKGDQVRY 9
+KGD VR+
Sbjct: 991 VKGDDVRF 998


>sp|Y1282_METMP|UPF0200 protein MMP1282|Methanococcus maripaludis (strain DSM 14266

Query: 4 GDQVRYE 10
GD VRYE
Sbjct: 32 GDVVRYE 38


>sp|Y1399_METJA|UPF0200 protein MJ1399|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GDQVRYE 10
GD VRYE
Sbjct: 32 GDVVRYE 38


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IKGDQVRYE 10
+KGD+ RY+
Sbjct: 1331 VKGDKRRYK 1339




57|SequenceR|290|281|INLPIFIKGD

>sp|HPRT_FERPA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Ferroglobus placidus (strain DSM 10642

Query: 2 NLPIFIKGD 10
N PI +KGD
Sbjct: 11 NAPIIMKGD 19


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 INLPIFIKGD 10
+NLP++I D
Sbjct: 229 LNLPVYICND 238


>sp|Y383_PYRFU|UNCHARACTERIZED protein PF0383|Pyrococcus furiosus (strain ATCC 43587

Query: 1 INLPIFIKGD 10
+ +PIF+K D
Sbjct: 64 VEVPIFVKVD 73


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 NLPIFIK 8
NLP+++K
Sbjct: 653 NLPVYVK 659


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 NLPIFIK 8
NLP+++K
Sbjct: 653 NLPVYVK 659


>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 4 PIFIKG 9
PIFIKG
Sbjct: 265 PIFIKG 270


>sp|DHYS_THEAC|PROBABLE deoxyhypusine synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NLPIFIKG 9
N+P+F+ G
Sbjct: 183 NIPVFVPG 190


>sp|Y1512_PYRAB|UNCHARACTERIZED protein PYRAB15120|Pyrococcus abyssi (strain GE5 /

Query: 1 INLPIFIKGD 10
+ +PIF+K D
Sbjct: 64 VEVPIFVKVD 73


>sp|CARA_THEVO|CARBAMOYL phosphate synthase small chain|Thermoplasma volcanium (strain ATCC

Query: 4 PIFIKGD 10
P+F+KG+
Sbjct: 158 PVFVKGE 164


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 INLPIFIK 8
+NLP F++
Sbjct: 7 VNLPFFVE 14


>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC

Query: 1 INLPIFIKG 9
IN+P FIK
Sbjct: 60 INIPGFIKA 68


>sp|RIFK_METHJ|RIBOFLAVIN kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 INLPIFIK 8
+N P+F+K
Sbjct: 19 LNTPVFLK 26


>sp|Y644_THEKO|UNCHARACTERIZED protein TK0644|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 INLPIFIKGD 10
+ +P+F+K D
Sbjct: 68 LEVPVFVKVD 77


>sp|Y338_HYPBU|UPF0200 protein Hbut_0338|Hyperthermus butylicus (strain DSM 5456

Query: 1 INLPIFIKGD 10
+ +P+++ GD
Sbjct: 29 MGIPVYVMGD 38


>sp|Y1138_METJA|UNCHARACTERIZED protein MJ1138|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LPIFIKGD 10
+PI IKGD
Sbjct: 120 IPIEIKGD 127


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LPIFIKGD 10
+P+F+K D
Sbjct: 498 VPVFLKAD 505


>sp|SPT5_PYRFU|TRANSCRIPTION elongation factor Spt5|Pyrococcus furiosus (strain ATCC 43587

Query: 1 INLPIFIKGD 10
+ +P+ IKGD
Sbjct: 131 VPIPVTIKGD 140


>sp|Y1021_METJA|UNCHARACTERIZED protein MJ1021|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NLPIFIK 8
N+P+F+K
Sbjct: 76 NIPVFMK 82


>sp|DNAG_PYRAR|DNA primase DnaG|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 NLPIFIKGD 10
N+ +FI GD
Sbjct: 216 NVTVFIDGD 224


>sp|DNAG_PYRAE|DNA primase DnaG|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 NLPIFIKGD 10
N+ +FI GD
Sbjct: 216 NVTVFIDGD 224


>sp|Y2111_ARCFU|UPF0056 membrane protein AF_2111|Archaeoglobus fulgidus (strain ATCC

Query: 2 NLPIFI 7
NLPIFI
Sbjct: 26 NLPIFI 31


>sp|PUS10_METJA|TRNA pseudouridine synthase Pus10|Methanocaldococcus jannaschii (strain

Query: 4 PIFIKG 9
P+FIKG
Sbjct: 206 PLFIKG 211


>sp|FDHD_THEVO|SULFUR carrier protein FdhD|Thermoplasma volcanium (strain ATCC 51530

Query: 1 INLPIFIKG 9
++LP+ +KG
Sbjct: 153 VSLPVIMKG 161




58|SequenceR|295|286|DGQVTINLPI

>sp|DNLI_METAR|DNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GQVTINLPI 10
GQ TI+LP+
Sbjct: 349 GQSTIDLPL 357


>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 DGQVTINL 8
DGQVTI++
Sbjct: 235 DGQVTIDV 242


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.14.25

Query: 1 DGQVTINL 8
DGQVTI++
Sbjct: 235 DGQVTIDV 242


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 DGQVTINL 8
DGQVTI++
Sbjct: 235 DGQVTIDV 242


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 DGQVTINL 8
DGQVTI++
Sbjct: 235 DGQVTIDV 242


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 DGQVTINL 8
DGQVTI++
Sbjct: 235 DGQVTIDV 242


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.16.4

Query: 1 DGQVTINL 8
DGQVTI++
Sbjct: 235 DGQVTIDV 242


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DGQVTINLP 9
+G+V++NLP
Sbjct: 505 EGEVSMNLP 513


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DGQVTINLP 9
+G++T+N+P
Sbjct: 505 EGEITMNMP 513


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 DGQVTINLPI 10
DG+ T+ LP+
Sbjct: 502 DGEGTLKLPL 511


>sp|TRPA_PYRAB|TRYPTOPHAN synthase alpha chain|Pyrococcus abyssi (strain GE5 /

Query: 1 DGQVTINLPI 10
DG + ++LP+
Sbjct: 110 DGMLIVDLPV 119


>sp|PRIS_THEKO|DNA primase small subunit PriS|Thermococcus kodakarensis (strain ATCC

Query: 1 DGQVTINL 8
DG+VT++L
Sbjct: 280 DGRVTVDL 287


>sp|PRIS_PYRHO|DNA primase small subunit PriS|Pyrococcus horikoshii (strain ATCC

Query: 1 DGQVTINL 8
DG+VT++L
Sbjct: 280 DGRVTVDL 287


>sp|PRIS_PYRAB|DNA primase small subunit PriS|Pyrococcus abyssi (strain GE5 /

Query: 1 DGQVTINL 8
DG+VT++L
Sbjct: 280 DGRVTVDL 287


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 DGQVTINLP 9
DG+ T+ LP
Sbjct: 928 DGEFTMTLP 936


>sp|KPRS_PYRAE|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DGQVTINLP 9
DG+V + LP
Sbjct: 31 DGEVLVRLP 39


>sp|MTM6_METJA|TYPE II methyltransferase M.MjaVI|Methanocaldococcus jannaschii

Query: 1 DGQVTINLPI 10
DG++ +N+P+
Sbjct: 77 DGRLCLNIPL 86


>sp|SLAB_METS5|S-LAYER protein B|Metallosphaera sedula (strain ATCC 51363

Query: 1 DGQVTINLP 9
GQ +NLP
Sbjct: 152 SGQAVLNLP 160


>sp|AATB_METBA|A-TYPE ATP synthase subunit B|Methanosarcina barkeri

Query: 4 VTINLP 9
VTINLP
Sbjct: 30 VTINLP 35


>sp|RIFK_CENSY|RIBOFLAVIN kinase|Cenarchaeum symbiosum (strain A)

Query: 2 GQVTINLPI 10
G++TI +P+
Sbjct: 181 GKITIRIPL 189




59|SequenceR|300|291|MSVVVDGQVT

>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 VVVDGQVT 10
V +DGQVT
Sbjct: 232 VTIDGQVT 239


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.16.4

Query: 3 VVVDGQVT 10
V +DGQVT
Sbjct: 232 VTIDGQVT 239


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.14.25

Query: 3 VVVDGQVT 10
V +DGQVT
Sbjct: 232 VTIDGQVT 239


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 VVVDGQVT 10
V +DGQVT
Sbjct: 232 VTIDGQVT 239


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 VVVDGQVT 10
V +DGQVT
Sbjct: 232 VTIDGQVT 239


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 VVVDGQVT 10
V +DGQVT
Sbjct: 232 VTIDGQVT 239


>sp|DADD_METVS|5'-DEOXYADENOSINE deaminase|Methanococcus vannielii (strain ATCC 35089

Query: 2 SVVVDGQVT 10
SVV+DG++T
Sbjct: 387 SVVIDGKLT 395


>sp|MCAL_HALMA|L-MALYL-COA/BETA-METHYLMALYL-COA lyase|Haloarcula marismortui (strain ATCC 43049

Query: 2 SVVVDGQV 9
+VVVDGQ+
Sbjct: 292 AVVVDGQM 299


>sp|GCSH1_SULAC|PROBABLE glycine cleavage system H|Sulfolobus acidocaldarius (strain

Query: 1 MSVVVDGQ 8
MSVV+DG+
Sbjct: 1 MSVVIDGK 8


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii

Query: 3 VVVDGQVT 10
VV+DG++T
Sbjct: 35 VVIDGRIT 42




60|SequenceR|305|296|SRLHYMSVVV

>sp|GFCR_METMA|TRANSCRIPTIONAL regulator GfcR|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SRLHYMSVVV 10
+RLHY+S+ +
Sbjct: 66 TRLHYISLAL 75


>sp|GFCR1_METBF|TRANSCRIPTIONAL regulator GfcR 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 SRLHYMSVVV 10
+RLHY+S+ +
Sbjct: 66 TRLHYISLAL 75


>sp|GFCR1_METAC|TRANSCRIPTIONAL regulator GfcR 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SRLHYMSVVV 10
+RLHY+S+ +
Sbjct: 66 TRLHYISLAL 75




61|SequenceR|310|301|RSGITSRLHY

***** No hits found ******


62|SequenceR|315|306|VKAQLRSGIT

>sp|RL34_THEON|LARGE ribosomal subunit protein eL34|Thermococcus onnurineus (strain

Query: 1 VKAQLRSGIT 10
+KAQ+R+GI+
Sbjct: 80 IKAQIRAGIS 89


>sp|IF5A_THEGJ|TRANSLATION initiation factor 5A|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VKAQLRSGIT 10
VK QL+ GIT
Sbjct: 109 VKDQLKEGIT 118




63|SequenceR|320|311|IQTNTVKAQL

>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 IQTNTVKAQL 10
I TN VKAQL
Sbjct: 212 INTNRVKAQL 221


>sp|RFCL_METST|REPLICATION factor C large subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IQTNTVKAQL 10
+ TN++ AQL
Sbjct: 159 VHTNSINAQL 168




64|SequenceR|325|316|FQLQFIQTNT

>sp|TRM4_METJA|TRNA (cytosine(48)-C(5))-methyltransferase|Methanocaldococcus

Query: 2 QLQFIQTNT 10
++QFI+ NT
Sbjct: 9 KMQFIRVNT 17


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 2 QLQFIQTN 9
+L+FI+TN
Sbjct: 442 ELEFIRTN 449




65|SequenceR|330|321|IFGTHFQLQF

>sp|ENDA_METAC|TRNA-SPLICING endonuclease|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FGTHFQL 8
FGTHF++
Sbjct: 279 FGTHFRV 285


>sp|ENDA_METMA|TRNA-SPLICING endonuclease|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FGTHFQL 8
FGTHF++
Sbjct: 282 FGTHFRV 288


>sp|NUCS_SULTO|ENDONUCLEASE NucS|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FGTHFQLQF 10
FGT F L+F
Sbjct: 167 FGTPFVLEF 175




66|SequenceR|335|326|TTDLPIFGTH

>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein MJ0993|Methanocaldococcus

Query: 2 TDLPIFGT 9
TD P+FGT
Sbjct: 323 TDCPLFGT 330


>sp|PDXT_META3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus aeolicus (strain

Query: 3 DLPIFGT 9
DLPI GT
Sbjct: 68 DLPILGT 74


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 LPIFGTH 10
+PIFG H
Sbjct: 238 VPIFGNH 244


>sp|RNJ_PYRAB|RIBONUCLEASE J|Pyrococcus abyssi (strain GE5 /

Query: 3 DLPIFGT 9
D+PI+GT
Sbjct: 102 DVPIYGT 108


>sp|PMDHL_METJA|PHOSPHOMEVALONATE dehydratase large subunit|Methanocaldococcus jannaschii (strain

Query: 1 TTDLPIFGTH 10
T +LP FG H
Sbjct: 124 TGNLPRFGEH 133


>sp|COBQ_METKA|PROBABLE cobyric acid synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 TDLPIFGTH 10
TD P+ GT+
Sbjct: 429 TDRPVLGTY 437


>sp|PDXT_METVS|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus vannielii

Query: 3 DLPIFGT 9
D+PI GT
Sbjct: 69 DIPILGT 75


>sp|PDXT_SACS2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus solfataricus

Query: 1 TTDLPIFGT 9
T+ LP+ GT
Sbjct: 75 TSGLPVLGT 83


>sp|PDXT_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 TTDLPIFGT 9
T+ LP+ GT
Sbjct: 75 TSGLPVMGT 83


>sp|PDXT_SACI6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 TTDLPIFGT 9
T+ LP+ GT
Sbjct: 75 TSGLPVMGT 83


>sp|PDXT_SACI4|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 TTDLPIFGT 9
T+ LP+ GT
Sbjct: 75 TSGLPVMGT 83


>sp|PDXT_SACI3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 TTDLPIFGT 9
T+ LP+ GT
Sbjct: 75 TSGLPVMGT 83


>sp|PDXT_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 TTDLPIFGT 9
T+ LP+ GT
Sbjct: 75 TSGLPVMGT 83


>sp|PDXT_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 TTDLPIFGT 9
T+ LP+ GT
Sbjct: 75 TSGLPVMGT 83


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 2 TDLPIFGTH 10
T++P+ G H
Sbjct: 251 TEIPLLGDH 259


>sp|IF6_METPE|TRANSLATION initiation factor 6|Methanosphaerula palustris (strain ATCC

Query: 1 TTDLPI 6
TTDLP+
Sbjct: 170 TTDLPV 175




67|SequenceR|340|331|TFKLVTTDLP

>sp|RSMA_PYRHO|PROBABLE ribosomal RNA small subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 TFKLVTTDL 9
TFKL+ TD
Sbjct: 120 TFKLLKTDF 128


>sp|RSMA_ARCFU|PROBABLE ribosomal RNA small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 TFKLVTTDL 9
TFKL+ TD
Sbjct: 110 TFKLLKTDF 118


>sp|PTAS_METTE|PHOSPHATE acetyltransferase|Methanosarcina thermophila

Query: 1 TFKLVTTDLP 10
TF+L+ D+P
Sbjct: 193 TFELLVQDVP 202




68|SequenceR|345|336|DLEPKTFKLV

>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DLEPKTFKL 9
D++P+TF++
Sbjct: 539 DIDPQTFEV 547


>sp|RFCL_METB6|REPLICATION factor C large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 DLEPKTF 7
DL+P+TF
Sbjct: 372 DLDPETF 378


>sp|SOR_ACIAM|SULFUR oxygenase/reductase|Acidianus ambivalens (Desulfurolobus

Query: 3 EPKTFKL 9
EPKTF++
Sbjct: 16 EPKTFEM 22


>sp|DPHB_ARCFU|DIPHTHINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DLEPKTFKLV 10
DLE +F+L+
Sbjct: 60 DLEENSFRLI 69


>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 DLEPKT 6
DLEPKT
Sbjct: 269 DLEPKT 274


>sp|RS2_METST|SMALL ribosomal subunit protein uS2|Methanosphaera stadtmanae (strain

Query: 1 DLEPKTFKL 9
DLEP F+L
Sbjct: 188 DLEPTDFEL 196


>sp|SYR_SULAC|ARGININE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DLEPKTFK 8
DL+P T+K
Sbjct: 203 DLDPDTYK 210


>sp|IF2P_METB6|PROBABLE translation initiation factor IF-2|Methanoregula boonei (strain DSM

Query: 1 DLEPKTFKLV 10
D+E KT+++V
Sbjct: 160 DIETKTYEIV 169




69|SequenceR|350|341|PVDCADLEPK

>sp|AROC_METAC|CHORISMATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PVDCADLE 8
PV CADLE
Sbjct: 180 PVRCADLE 187


>sp|AROC_METBF|CHORISMATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PVDCADLE 8
PV CADLE
Sbjct: 180 PVRCADLE 187


>sp|AROC_METBU|CHORISMATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PVDCADLE 8
PV CADLE
Sbjct: 180 PVRCADLE 187


>sp|MRE11_METTH|DNA double-strand break repair protein|Methanothermobacter

Query: 1 PVDCADLE 8
PVD AD+E
Sbjct: 341 PVDLADME 348


>sp|AROC_THEGJ|CHORISMATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PVDCADLEPK 10
PV+C +EP+
Sbjct: 157 PVECPQVEPE 166


>sp|RIFK_METVS|RIBOFLAVIN kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VDCADLEPK 10
VDCA + PK
Sbjct: 86 VDCAIVSPK 94


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 3 DCADLE 8
DCADLE
Sbjct: 24 DCADLE 29


>sp|METK_META3|S-ADENOSYLMETHIONINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DCADLEPK 10
D AD+EPK
Sbjct: 369 DVADIEPK 376


>sp|AROC_METAR|CHORISMATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PVDCADL 7
PV CADL
Sbjct: 180 PVRCADL 186


>sp|LEUC_METTH|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanothermobacter

Query: 2 VDCADLEPK 10
VD +DLEP+
Sbjct: 262 VDVSDLEPQ 270


>sp|RNH2_PYRHO|RIBONUCLEASE HII|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VDCADLEPK 10
VD AD++PK
Sbjct: 104 VDSADVDPK 112


>sp|Y1336_HALSA|PUTATIVE esterase VNG_1336C|Halobacterium salinarum (strain ATCC 700922

Query: 1 PVDCADLEP 9
P D AD EP
Sbjct: 127 PADTADAEP 135


>sp|PYRK_METKA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanopyrus kandleri

Query: 4 CADLEP 9
CADLEP
Sbjct: 76 CADLEP 81


>sp|RIFK_METM6|RIBOFLAVIN kinase|Methanococcus maripaludis (strain C6 /

Query: 2 VDCADLEPK 10
+DCA + PK
Sbjct: 86 IDCAIVAPK 94


>sp|IF5A_PICTO|TRANSLATION initiation factor 5A|Picrophilus torridus (strain ATCC 700027

Query: 1 PVDCADLE 8
PVD ADLE
Sbjct: 99 PVDPADLE 106


>sp|AROC_METST|CHORISMATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 VDCADLE 8
V CADLE
Sbjct: 182 VRCADLE 188


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 PVDCADLE 8
P+D DLE
Sbjct: 991 PIDAQDLE 998


>sp|SFSA_AERPE|SUGAR fermentation stimulation protein homolog|Aeropyrum pernix (strain

Query: 1 PVDCADLEP 9
PV C L+P
Sbjct: 230 PVQCPPLQP 238


>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 2 VDCADLEP 9
+DCA EP
Sbjct: 302 IDCAAFEP 309


>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 2 VDCADLEP 9
+DCA EP
Sbjct: 302 IDCAAFEP 309


>sp|Y796_METKA|UPF0288 protein MK0796|Methanopyrus kandleri (strain AV19 /

Query: 1 PVDCADLE 8
PVD +DLE
Sbjct: 97 PVDVSDLE 104


>sp|PPAC_METTP|MANGANESE-DEPENDENT inorganic pyrophosphatase|Methanothrix thermoacetophila (strain DSM

Query: 2 VDCADLEPK 10
+D ADL PK
Sbjct: 222 MDLADLAPK 230


>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PVDCADLEPK 10
P DC L+P+
Sbjct: 93 PEDCDGLDPE 102


>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 2 VDCADLEPK 10
+D +DLEP+
Sbjct: 261 LDVSDLEPQ 269


>sp|METE_AERPE|METHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PVDCADLEPK 10
PVD DLE K
Sbjct: 234 PVDQFDLEMK 243




70|SequenceR|355|346|QPYKEPVDCA

>sp|FNO_METTH|F420-DEPENDENT NADP reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 EPVDC 9
EPVDC
Sbjct: 159 EPVDC 163


>sp|Y786_METJA|UNCHARACTERIZED protein MJ0786|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PYKEPVDC 9
PY VDC
Sbjct: 31 PYNTKVDC 38


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 QPYKEP 6
+PYKEP
Sbjct: 107 KPYKEP 112


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PYKEPV 7
PY EPV
Sbjct: 576 PYSEPV 581


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PYKEPV 7
PY+EPV
Sbjct: 340 PYEEPV 345


>sp|NFI_AERPE|ENDONUCLEASE V|Aeropyrum pernix (strain ATCC 700893

Query: 5 EPVDC 9
EPVDC
Sbjct: 65 EPVDC 69


>sp|GLMM_METST|PROBABLE phosphoglucosamine mutase|Methanosphaera stadtmanae (strain ATCC

Query: 1 QPYKEPVDCA 10
+P K VDCA
Sbjct: 172 KPLKVVVDCA 181


>sp|AATE_NATPD|A-TYPE ATP synthase subunit E|Natronomonas pharaonis (strain ATCC 35678

Query: 5 EPVDC 9
EPVDC
Sbjct: 147 EPVDC 151


>sp|Y273_META3|UPF0212 protein Maeo_0273|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 EPVDC 9
EP+DC
Sbjct: 57 EPIDC 61


>sp|DTDA_PYRCJ|D-AMINOACYL-TRNA deacylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 KEPVDCA 10
+EP DCA
Sbjct: 111 EEPFDCA 117


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei (strain

Query: 2 PYKEPVDC 9
PY+EP C
Sbjct: 288 PYREPEFC 295


>sp|Y819_METVS|UPF0212 protein Mevan_0819|Methanococcus vannielii (strain ATCC 35089

Query: 5 EPVDC 9
EP+DC
Sbjct: 57 EPIDC 61


>sp|Y753_METM7|UPF0212 protein MmarC7_0753|Methanococcus maripaludis (strain C7 /

Query: 5 EPVDC 9
EP+DC
Sbjct: 57 EPIDC 61


>sp|Y1509_METMP|UPF0212 protein MMP1509|Methanococcus maripaludis (strain DSM 14266

Query: 5 EPVDC 9
EP+DC
Sbjct: 57 EPIDC 61


>sp|Y1509_METMI|UPF0212 protein in gatA 3'region|Methanococcus maripaludis (Methanococcus

Query: 5 EPVDC 9
EP+DC
Sbjct: 57 EPIDC 61


>sp|Y1165_METM6|UPF0212 protein MmarC6_1165|Methanococcus maripaludis (strain C6 /

Query: 5 EPVDC 9
EP+DC
Sbjct: 57 EPIDC 61


>sp|Y068_METM5|UPF0212 protein MmarC5_0068|Methanococcus maripaludis (strain C5 /

Query: 5 EPVDC 9
EP+DC
Sbjct: 57 EPIDC 61


>sp|SYS_PYRIL|SERINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 QPYKEPVDCA 10
+PY EP+ A
Sbjct: 428 RPYLEPIKAA 437


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 QPYKEPVDCA 10
+PY EP+ A
Sbjct: 429 RPYLEPIKAA 438


>sp|Y663_PYRAB|PROBABLE S-adenosyl-L-methionine-binding protein PYRAB06630|Pyrococcus

Query: 2 PYKEPVD 8
P+KEP D
Sbjct: 18 PFKEPKD 24


>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 QPYKEPVDCA 10
+PY EP+ A
Sbjct: 427 RPYLEPIRAA 436




71|SequenceR|360|351|TVQFLQPYKE

>sp|FRHG_METJA|COENZYME F420 hydrogenase subunit gamma|Methanocaldococcus jannaschii

Query: 2 VQFLQPYKE 10
+++LQPY E
Sbjct: 147 MEYLQPYAE 155


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 2 VQFLQPYKE 10
V+F +PYKE
Sbjct: 390 VRFEKPYKE 398


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 FLQPYKE 10
FL+P+KE
Sbjct: 99 FLEPFKE 105


>sp|PYRF_METJA|OROTIDINE 5'-phosphate decarboxylase|Methanocaldococcus jannaschii (strain

Query: 2 VQFLQP 7
VQFLQP
Sbjct: 120 VQFLQP 125


>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 1 TVQFLQPY 8
T++FL PY
Sbjct: 353 TIRFLPPY 360


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 2 VQFLQPYK 9
VQFLQ Y+
Sbjct: 846 VQFLQTYE 853


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VQFLQPYK 9
VQFLQ Y+
Sbjct: 508 VQFLQTYE 515


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VQFLQPYK 9
VQFLQ Y+
Sbjct: 977 VQFLQTYE 984


>sp|Y1253_SACS2|PUTATIVE esterase SSO1253|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VQFLQPYKE 10
+ FL+P KE
Sbjct: 90 INFLKPMKE 98


>sp|MTM4_METJA|TYPE II methyltransferase M.MjaIV|Methanocaldococcus jannaschii (strain

Query: 2 VQFLQPYKE 10
V F+QPY +
Sbjct: 183 VIFIQPYND 191


>sp|LYSJ_PYRAE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 TVQFLQPY 8
T++FL PY
Sbjct: 352 TLRFLPPY 359




72|SequenceR|365|356|LEVDLTVQFL

>sp|IDI2_PYRHO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EVDLTVQFL 10
E+DLTV+FL
Sbjct: 47 EIDLTVEFL 55


>sp|IDI2_THEKO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EVDLTVQFL 10
E+DL+V+FL
Sbjct: 51 EIDLSVEFL 59


>sp|IDI2_PYRAE|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EVDLTVQFL 10
EVDLT +FL
Sbjct: 43 EVDLTTRFL 51


>sp|IDI2_THEON|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus onnurineus (strain NA1)

Query: 2 EVDLTVQFL 10
E+DL+V+FL
Sbjct: 51 EIDLSVEFL 59


>sp|IDI2_PYRFU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EVDLTVQFL 10
E+DL+V+FL
Sbjct: 48 EIDLSVKFL 56


>sp|IDI2_PYRAB|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus abyssi (strain GE5 /

Query: 2 EVDLTVQFL 10
E+DL+V+FL
Sbjct: 46 EIDLSVKFL 54


>sp|IDI2_METAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EVDLTVQFL 10
E+DLTV FL
Sbjct: 47 ELDLTVDFL 55


>sp|IDI2_PYRIL|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 EVDLTVQFL 10
EVD+T +FL
Sbjct: 43 EVDITTRFL 51


>sp|FAU1_CALMQ|PROBABLE ribonuclease FAU-1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LEVDLTV 7
LEVDLTV
Sbjct: 405 LEVDLTV 411


>sp|APGM_METKA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanopyrus kandleri (strain AV19 /

Query: 2 EVDLTVQF 9
EVDL V+F
Sbjct: 141 EVDLPVEF 148


>sp|IDI2_PYRNV|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 EVDLTVQFL 10
EVD T +FL
Sbjct: 43 EVDTTAKFL 51




73|SequenceR|370|361|KDHPQLEVDL

>sp|IF6_METMJ|TRANSLATION initiation factor 6|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 HPQLEVDL 10
HP++++D+
Sbjct: 112 HPEMQIDV 119


>sp|AATB_THEGJ|A-TYPE ATP synthase subunit B|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KDHPQLEVDL 10
+DHPQL L
Sbjct: 364 EDHPQLSQQL 373


>sp|AATB_THEKO|A-TYPE ATP synthase subunit B|Thermococcus kodakarensis (strain ATCC

Query: 1 KDHPQLEVDL 10
+DHPQL L
Sbjct: 366 EDHPQLSQQL 375


>sp|AATB_THESI|A-TYPE ATP synthase subunit B|Thermococcus sp. (strain KI)

Query: 1 KDHPQLEVDL 10
+DHPQL L
Sbjct: 364 EDHPQLSQQL 373


>sp|AATB_PYRHO|A-TYPE ATP synthase subunit B|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KDHPQLEVDL 10
+DHPQL L
Sbjct: 366 EDHPQLAQQL 375


>sp|AATB_PYRFU|A-TYPE ATP synthase subunit B|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KDHPQLEVDL 10
+DHPQL L
Sbjct: 363 EDHPQLAQQL 372


>sp|AATB_PYRAB|A-TYPE ATP synthase subunit B|Pyrococcus abyssi (strain GE5 /

Query: 1 KDHPQLEVDL 10
+DHPQL L
Sbjct: 363 EDHPQLAQQL 372


>sp|AATB_DESSY|A-TYPE ATP synthase subunit B|Desulfurococcus sp. (strain SY)

Query: 1 KDHPQLEVDL 10
+DHPQL L
Sbjct: 364 EDHPQLAQQL 373


>sp|HIS1_METTH|ATP phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 3 HPQLEV 8
HPQ+EV
Sbjct: 42 HPQIEV 47


>sp|ARGC_META3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DHPQLEV 8
+HPQ+E+
Sbjct: 23 NHPQVEI 29


>sp|RS3_METS3|SMALL ribosomal subunit protein uS3|Methanobrevibacter smithii (strain

Query: 2 DHPQLEV 8
D+PQ+EV
Sbjct: 75 DNPQIEV 81


>sp|AATB_THEON|A-TYPE ATP synthase subunit B|Thermococcus onnurineus (strain NA1)

Query: 2 DHPQLEVDL 10
DHPQL L
Sbjct: 367 DHPQLSQQL 375


>sp|RL22_SACS2|LARGE ribosomal subunit protein uL22|Saccharolobus solfataricus (strain

Query: 3 HPQLEVD 9
+PQL+VD
Sbjct: 6 YPQLDVD 12


>sp|FTSZ2_HALVD|CELL division protein FtsZ 2|Haloferax volcanii (strain ATCC 29605

Query: 2 DHPQLEVD 9
+HP L+VD
Sbjct: 264 NHPLLDVD 271


>sp|RL1_SULAC|LARGE ribosomal subunit protein uL1|Sulfolobus acidocaldarius (strain

Query: 1 KDHPQLEV 8
KD PQ++V
Sbjct: 163 KDQPQVQV 170




74|SequenceR|375|366|TLDIVKDHPQ

>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TLDIVKDHP 9
T+D++K+HP
Sbjct: 652 TMDVIKNHP 660


>sp|HIS5_HALMA|IMIDAZOLE glycerol phosphate synthase subunit|Haloarcula marismortui (strain

Query: 2 LDIVKDHP 9
LD+ +DHP
Sbjct: 133 LDVTRDHP 140


>sp|AMPD_ARCFU|ANHYDROMEVALONATE phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TLDIVKDHP 9
T DIV+D P
Sbjct: 259 TYDIVRDEP 267


>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 1 TLDIVKD 7
TLD+VKD
Sbjct: 386 TLDVVKD 392


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LDIVKDHP 9
L+I+K+HP
Sbjct: 334 LNIIKNHP 341


>sp|ASSY_METST|ARGININOSUCCINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LDIVKDHPQ 10
LD+V DH Q
Sbjct: 319 LDVVNDHMQ 327


>sp|BRIX_PYRHO|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus horikoshii

Query: 2 LDIVKDHP 9
LDI KD P
Sbjct: 171 LDITKDRP 178


>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LDIVKDHP 9
+ I KDHP
Sbjct: 331 IKITKDHP 338


>sp|PDXS_SACS2|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus solfataricus

Query: 3 DIVKDH 8
DI+KDH
Sbjct: 23 DIIKDH 28


>sp|TRKA_ARCFU|TRK system potassium uptake protein|Archaeoglobus fulgidus (strain ATCC

Query: 4 IVKDHP 9
IVK+HP
Sbjct: 106 IVKEHP 111


>sp|AMPD_METSM|ANHYDROMEVALONATE phosphate decarboxylase|Methanobrevibacter smithii

Query: 1 TLDIVKDHP 9
T DI++D P
Sbjct: 243 TYDIIRDQP 251


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 DIVKDHP 9
D+VKD P
Sbjct: 252 DLVKDQP 258


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 DIVKDH 8
DI+KDH
Sbjct: 268 DILKDH 273


>sp|APGM_IGNH4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 IVKDHP 9
I+KDHP
Sbjct: 208 ILKDHP 213


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 VKDHP 9
VKDHP
Sbjct: 637 VKDHP 641


>sp|BRIX_PYRFU|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus furiosus

Query: 2 LDIVKDHP 9
LD+ KD P
Sbjct: 171 LDVTKDRP 178


>sp|Y2387_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 LDIVKDHPQ 10
+ IVKDH +
Sbjct: 450 MQIVKDHAE 458


>sp|PCNA_METHJ|DNA polymerase sliding clamp|Methanospirillum hungatei JF-1 (strain

Query: 1 TLDIVKDHP 9
T+D+ DHP
Sbjct: 214 TIDLGVDHP 222


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 1 TLDIVKDHP 9
T D+V+D P
Sbjct: 249 TYDVVRDEP 257


>sp|DPHB_HALSA|DIPHTHINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LDIVKDHPQ 10
LDI DHP+
Sbjct: 168 LDIKVDHPR 176


>sp|DPHB_HALS3|DIPHTHINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LDIVKDHPQ 10
LDI DHP+
Sbjct: 168 LDIKVDHPR 176


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 5 VKDHP 9
VKDHP
Sbjct: 636 VKDHP 640


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LDIVKDH 8
LDI+K+H
Sbjct: 211 LDILKEH 217


>sp|APGM_METKA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanopyrus kandleri (strain AV19 /

Query: 3 DIVKDHP 9
+++KDHP
Sbjct: 211 EVLKDHP 217


>sp|APGM_METS3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanobrevibacter smithii (strain ATCC

Query: 1 TLDIVKDHP 9
+ +++KDHP
Sbjct: 200 SYEMIKDHP 208




75|SequenceR|380|371|HEWPPTLDIV

>sp|GCSPA_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 HEWPPTLDIV 10
H W P LD++
Sbjct: 4 HPWLPNLDLI 13


>sp|GCSPA_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 HEWPPTLDIV 10
H W P LD++
Sbjct: 4 HPWLPNLDLI 13


>sp|GCSPA_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 HEWPPTLDIV 10
H W P LD++
Sbjct: 4 HPWLPNLDLI 13


>sp|GCSPA_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 HEWPPTLDIV 10
H W P LD++
Sbjct: 4 HPWLPNLDLI 13


>sp|GCSPA_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 HEWPPTLDIV 10
H W P LD++
Sbjct: 4 HPWLPNLDLI 13


>sp|GCSPA_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 HEWPPTLDIV 10
H W P LD++
Sbjct: 4 HPWLPNLDLI 13


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 4 PPTLDIV 10
PPT+D+V
Sbjct: 119 PPTVDVV 125


>sp|GCSPA_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 HEWPPTLDI 9
H W P LD+
Sbjct: 4 HPWLPNLDL 12


>sp|SUA5_PYRAB|THREONYLCARBAMOYL-AMP synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 EWPPTL 7
EWPP L
Sbjct: 188 EWPPVL 193


>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 2 EWPPTLDIV 10
EW P LD++
Sbjct: 271 EWLPNLDML 279


>sp|Y692_METTH|UNCHARACTERIZED protein MTH_692|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 HEWPPTLDIV 10
HE PT DI+
Sbjct: 246 HEGDPTNDII 255


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus vannielii

Query: 1 HEWPPTLDIV 10
++W P DI+
Sbjct: 328 YKWAPEYDII 337


>sp|RTCA_METMA|RNA 3'-terminal phosphate cyclase|Methanosarcina mazei (strain ATCC

Query: 3 WPPTLD 8
W PT+D
Sbjct: 125 WSPTID 130


>sp|RTCA_METBF|RNA 3'-terminal phosphate cyclase|Methanosarcina barkeri (strain Fusaro

Query: 3 WPPTLD 8
W PT+D
Sbjct: 125 WSPTID 130


>sp|RTCA_METAC|RNA 3'-terminal phosphate cyclase|Methanosarcina acetivorans (strain

Query: 3 WPPTLD 8
W PT+D
Sbjct: 125 WSPTID 130


>sp|Y774_ARCFU|UNCHARACTERIZED protein AF_0774|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EWPPTLD 8
EW PTL+
Sbjct: 39 EWIPTLE 45




76|SequenceR|385|376|DKTCYHEWPP

>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 YHEWP 9
YHEWP
Sbjct: 179 YHEWP 183


>sp|RS14Z_METHJ|SMALL ribosomal subunit protein uS14|Methanospirillum hungatei JF-1

Query: 2 KTCYHEWPP 10
+ C+ EW P
Sbjct: 40 RQCFREWAP 48


>sp|ARNS_SULAC|SERINE/THREONINE-PROTEIN kinase ArnS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DKTCYHEWPP 10
D T Y+++PP
Sbjct: 397 DYTSYYKYPP 406


>sp|COBS_SULAC|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DKTCYH 6
+KTCYH
Sbjct: 236 EKTCYH 241


>sp|RRP41_METMA|EXOSOME complex component Rrp41|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DKTCYHEW 8
D +CY EW
Sbjct: 40 DGSCYLEW 47


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 1 DKTCYHEW 8
D TCY W
Sbjct: 347 DNTCYLSW 354


>sp|PRIL_THEVO|DNA primase large subunit PriL|Thermoplasma volcanium (strain ATCC

Query: 1 DKTCYHEW 8
DK C+ +W
Sbjct: 304 DKLCHQDW 311


>sp|MTAP_PYRAB|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 5 YHEWPP 10
YHE+PP
Sbjct: 54 YHEFPP 59


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 YHEWP 9
YH+WP
Sbjct: 190 YHKWP 194


>sp|MTAP_PYRHO|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 YHEWPP 10
YHE+PP
Sbjct: 54 YHEFPP 59


>sp|MTAP_PYRFU|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 YHEWPP 10
YHE+PP
Sbjct: 54 YHEFPP 59


>sp|PRIS_SULAC|DNA primase small subunit PriS|Sulfolobus acidocaldarius (strain ATCC

Query: 4 CYHEW 8
CY+EW
Sbjct: 178 CYNEW 182


>sp|AATA_NITMS|A-TYPE ATP synthase subunit A|Nitrosopumilus maritimus (strain SCM1)

Query: 5 YHEWP 9
YH WP
Sbjct: 190 YHRWP 194


>sp|AATA_DESSY|A-TYPE ATP synthase subunit A|Desulfurococcus sp. (strain SY)

Query: 5 YHEWP 9
YH+WP
Sbjct: 187 YHKWP 191


>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 5 YHEWP 9
YH WP
Sbjct: 190 YHRWP 194


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 5 YHEWP 9
YH WP
Sbjct: 192 YHRWP 196


>sp|HYPA_PYRAB|HYDROGENASE maturation factor HypA|Pyrococcus abyssi (strain GE5 /

Query: 2 KTCYHEW 8
+ C HEW
Sbjct: 74 RNCGHEW 80


>sp|Y963_METJA|UNCHARACTERIZED protein MJ0963|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KTCYHEWP 9
K YHE+P
Sbjct: 344 KALYHEFP 351


>sp|AATA_THESI|A-TYPE ATP synthase subunit A|Thermococcus sp. (strain KI)

Query: 5 YHEWP 9
YH WP
Sbjct: 187 YHRWP 191


>sp|AATA_THEGJ|A-TYPE ATP synthase subunit A|Thermococcus gammatolerans (strain DSM 15229

Query: 5 YHEWP 9
YH WP
Sbjct: 187 YHRWP 191


>sp|AATA_THEON|A-TYPE ATP synthase subunit A|Thermococcus onnurineus (strain NA1)

Query: 5 YHEWP 9
YH WP
Sbjct: 187 YHRWP 191


>sp|PEPQ_PYRHO|XAA-PRO dipeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 HEWP 9
HEWP
Sbjct: 294 HEWP 297


>sp|PEPQ_PYRFU|XAA-PRO dipeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 6 HEWP 9
HEWP
Sbjct: 291 HEWP 294


>sp|AATA_THEKO|A-TYPE ATP synthase subunit A|Thermococcus kodakarensis (strain ATCC

Query: 5 YHEWP 9
YH WP
Sbjct: 187 YHRWP 191


>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 6 HEWP 9
HEWP
Sbjct: 420 HEWP 423


>sp|RL3_METPE|LARGE ribosomal subunit protein uL3|Methanosphaerula palustris (strain

Query: 5 YHEWP 9
YH WP
Sbjct: 27 YHSWP 31


>sp|HYPA_IGNH4|HYDROGENASE maturation factor HypA|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KTCYHEW 8
K C HEW
Sbjct: 76 KRCGHEW 82


>sp|HYPA_THEON|HYDROGENASE maturation factor HypA|Thermococcus onnurineus (strain NA1)

Query: 2 KTCYHEW 8
+ C HEW
Sbjct: 74 RDCGHEW 80


>sp|SYR_METMA|ARGININE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 YHEW 8
YHEW
Sbjct: 316 YHEW 319


>sp|SYR_METBU|ARGININE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 5 YHEW 8
YHEW
Sbjct: 314 YHEW 317


>sp|SYR_METBF|ARGININE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 YHEW 8
YHEW
Sbjct: 316 YHEW 319


>sp|SYR_METAC|ARGININE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 YHEW 8
YHEW
Sbjct: 314 YHEW 317


>sp|RISC_METTM|RIBOFLAVIN synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 DKTCYHE 7
DK C HE
Sbjct: 72 DKVCAHE 78


>sp|RISC_METTH|RIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DKTCYHE 7
DK C HE
Sbjct: 72 DKVCAHE 78


>sp|RISC_METJA|RIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKTCYHE 7
DK C HE
Sbjct: 73 DKVCAHE 79


>sp|TFRA_METTM|FUMARATE reductase (CoM/CoB) subunit A|Methanothermobacter marburgensis

Query: 2 KTCYH 6
+TCYH
Sbjct: 128 RTCYH 132


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 YHEWP 9
YH WP
Sbjct: 194 YHVWP 198


>sp|PRIL_THEAC|DNA primase large subunit PriL|Thermoplasma acidophilum (strain ATCC

Query: 1 DKTCYHEW 8
D C+ EW
Sbjct: 315 DPLCHREW 322


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 YHEWP 9
YH WP
Sbjct: 197 YHRWP 201


>sp|Y1137_METTH|UNCHARACTERIZED protein MTH_1137|Methanothermobacter thermautotrophicus (strain

Query: 4 CYHEWPP 10
CY E PP
Sbjct: 144 CYLEGPP 150


>sp|Y1017_METAC|UPF0251 protein MA_1017|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KTCYHEWPP 10
K C H W P
Sbjct: 106 KECDHMWEP 114


>sp|RL3_METHJ|LARGE ribosomal subunit protein uL3|Methanospirillum hungatei JF-1

Query: 5 YHEWP 9
YH WP
Sbjct: 27 YHAWP 31


>sp|GAD_SACS2|D-GLUCONATE/D-GALACTONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 YHEW 8
YHEW
Sbjct: 74 YHEW 77


>sp|RIO2_METJA|RIO-TYPE serine/threonine-protein kinase Rio2|Methanocaldococcus

Query: 5 YHEWPP 10
+HEW P
Sbjct: 3 HHEWVP 8


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 KTCYHEW 8
KTC HE+
Sbjct: 16 KTCGHEF 22


>sp|TRPE_AERPE|ANTHRANILATE synthase component 1|Aeropyrum pernix (strain ATCC 700893

Query: 6 HEWP 9
HEWP
Sbjct: 117 HEWP 120


>sp|HYPA_METKA|HYDROGENASE maturation factor HypA|Methanopyrus kandleri (strain AV19 /

Query: 4 CYHEWPP 10
C H W P
Sbjct: 76 CGHRWRP 82




77|SequenceR|390|381|ISPNVDKTCY

>sp|PYRB_METBF|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina barkeri

Query: 1 ISPNVDKTCY 10
ISP VD T Y
Sbjct: 273 ISPEVDSTPY 282


>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 1 ISPNVDKTCY 10
ISP +D++ Y
Sbjct: 147 ISPMIDRSAY 156


>sp|PYRB_METTP|ASPARTATE carbamoyltransferase catalytic subunit|Methanothrix

Query: 1 ISPNVDKT 8
ISP+VD+T
Sbjct: 271 ISPSVDET 278


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 ISPNVDKTCY 10
I+P D+ CY
Sbjct: 69 ITPMCDQCCY 78


>sp|COFD_METB6|2-PHOSPHO-L-LACTATE transferase|Methanoregula boonei (strain DSM 21154

Query: 1 ISPNVDKTCY 10
ISP+VD Y
Sbjct: 44 ISPDVDTVMY 53


>sp|MFNF_METVA|(4- vannielii

Query: 1 ISPNVDKTC 9
+S N+DK C
Sbjct: 4 VSQNIDKNC 12


>sp|PYRB_METMA|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina mazei (strain

Query: 1 ISPNVDKT 8
ISP+VD T
Sbjct: 274 ISPDVDDT 281


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 ISPNVDKTCY 10
I+P D+ CY
Sbjct: 69 ITPMCDQCCY 78


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 ISPNVDKTCY 10
I+P D+ CY
Sbjct: 69 ITPMCDQCCY 78


>sp|COFD_METHJ|2-PHOSPHO-L-LACTATE transferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ISPNVDKTCY 10
ISP+VD Y
Sbjct: 44 ISPDVDTVMY 53


>sp|PYRB_METMJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanoculleus marisnigri

Query: 1 ISPNVDKTCY 10
I P VD+T Y
Sbjct: 266 IDPAVDRTPY 275


>sp|COFD_METKA|2-PHOSPHO-L-LACTATE transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 ISPNVDKTCY 10
+SP+VD Y
Sbjct: 45 VSPDVDTVLY 54


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 ISPNVDKTCY 10
++P D+ CY
Sbjct: 69 VTPMCDQCCY 78


>sp|PYRB_THEKO|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus kodakarensis

Query: 1 ISPNVDKT 8
I P VDKT
Sbjct: 274 IHPEVDKT 281


>sp|PYRB_PYRHO|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus horikoshii

Query: 1 ISPNVDKT 8
I P VDKT
Sbjct: 274 IHPEVDKT 281


>sp|PYRB_PYRFU|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus furiosus (strain

Query: 1 ISPNVDKT 8
I P VDKT
Sbjct: 274 IHPEVDKT 281


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 ISPNVDKTCY 10
++P D+ CY
Sbjct: 69 VTPMCDQCCY 78


>sp|Y1027_METJA|UNCHARACTERIZED protein MJ1027|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PNVDKTCY 10
PN+DK Y
Sbjct: 282 PNLDKRIY 289


>sp|RL30_AERPE|LARGE ribosomal subunit protein uL30|Aeropyrum pernix (strain ATCC

Query: 1 ISPNVDKT 8
+ P++DKT
Sbjct: 15 VPPDIDKT 22


>sp|GGR1_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ISPNVDKTCY 10
++ N DKT Y
Sbjct: 223 VTGNTDKTAY 232




78|SequenceR|395|386|HSSFLISPNV

>sp|PYRF_METTH|OROTIDINE 5'-phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 1 HSSFLISPNV 10
SFLISP V
Sbjct: 173 QDSFLISPGV 182


>sp|THIDN_METJA|BIFUNCTIONAL thiamine biosynthesis protein ThiDN|Methanocaldococcus jannaschii

Query: 1 HSSFLISPN 9
+ SFLI+PN
Sbjct: 125 NKSFLITPN 133


>sp|PYRF_METST|OROTIDINE 5'-phosphate decarboxylase|Methanosphaera stadtmanae (strain ATCC

Query: 3 SFLISPNV 10
SF+ISP V
Sbjct: 167 SFIISPGV 174


>sp|PCNA2_THEKO|DNA polymerase sliding clamp 2|Thermococcus kodakarensis (strain ATCC

Query: 3 SFLISPNV 10
SFLI+P V
Sbjct: 241 SFLIAPRV 248




79|SequenceR|400|391|DQHEQHSSFL

>sp|Y554_METJA|UNCHARACTERIZED protein MJ0554|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DQHEQHSSFL 10
++H+ H+SF+
Sbjct: 3 NEHKAHASFM 12


>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii (strain

Query: 1 DQHEQHS 7
D HEQH+
Sbjct: 420 DYHEQHA 426




80|SequenceR|405|396|GLALTDQHEQ

>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 1 GLALTDQHE 9
G+ TD HE
Sbjct: 221 GMTCTDSHE 229


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 1 GLALTDQHE 9
G+ TD HE
Sbjct: 221 GMTCTDSHE 229


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 1 GLALTDQHE 9
G+ TD HE
Sbjct: 221 GMTCTDSHE 229


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 1 GLALTDQHE 9
G+ TD HE
Sbjct: 221 GMTCTDSHE 229


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 1 GLALTDQHE 9
G+ TD HE
Sbjct: 221 GMTCTDSHE 229


>sp|G6PI_HALWD|PROBABLE glucose-6-phosphate isomerase|Haloquadratum walsbyi (strain DSM

Query: 1 GLALTDQHEQ 10
L TDQH Q
Sbjct: 285 ALGATDQHSQ 294


>sp|RS17E_METLZ|SMALL ribosomal subunit protein eS17|Methanocorpusculum labreanum

Query: 1 GLALTDQH 8
G+AL +QH
Sbjct: 12 GIALLEQH 19


>sp|G6PI_NATPD|PROBABLE glucose-6-phosphate isomerase|Natronomonas pharaonis (strain ATCC

Query: 2 LALTDQHEQ 10
L TDQH Q
Sbjct: 284 LGATDQHSQ 292


>sp|G6PI_HALSA|PROBABLE glucose-6-phosphate isomerase|Halobacterium salinarum (strain ATCC

Query: 2 LALTDQHEQ 10
L TDQH Q
Sbjct: 287 LGATDQHSQ 295


>sp|G6PI_HALMA|PROBABLE glucose-6-phosphate isomerase|Haloarcula marismortui (strain ATCC

Query: 2 LALTDQHEQ 10
L TDQH Q
Sbjct: 287 LGATDQHSQ 295


>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 LALTDQHE 9
+A+ DQHE
Sbjct: 83 VAIADQHE 90




81|SequenceR|410|401|IPAQGGLALT

>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 1 IPAQGGLA 8
+PA+GGL+
Sbjct: 633 VPAEGGLS 640


>sp|RS5_METTH|SMALL ribosomal subunit protein uS5|Methanothermobacter

Query: 1 IPAQGGLAL 9
IPA GG+ L
Sbjct: 147 IPAPGGVGL 155




82|SequenceR|415|406|DPPIDIPAQG

>sp|MTMC2_METAC|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PPIDIPAQG 10
PPIDI +G
Sbjct: 35 PPIDIITKG 43


>sp|PORA_METTH|PYRUVATE synthase subunit PorA|Methanothermobacter thermautotrophicus

Query: 3 PIDIPAQ 9
P+DIP+Q
Sbjct: 177 PVDIPSQ 183


>sp|Y1317_ARCFU|UNCHARACTERIZED protein AF_1317|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PPIDIPAQ 9
PPI++P +
Sbjct: 300 PPIELPVK 307


>sp|AGL6_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl6|Haloferax volcanii

Query: 1 DPPIDIPAQG 10
+ P+D P QG
Sbjct: 8 ESPVDAPQQG 17


>sp|PORA_METTM|PYRUVATE synthase subunit PorA|Methanothermobacter marburgensis (strain ATCC

Query: 3 PIDIPAQ 9
P+DIP+Q
Sbjct: 177 PVDIPSQ 183


>sp|RL1_AERPE|LARGE ribosomal subunit protein uL1|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPIDIPAQG 10
PP+++PA G
Sbjct: 209 PPVEVPAIG 217


>sp|Y856_METTH|METALLOPROTEASE MTH_856|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PPIDIPA 8
PP D+PA
Sbjct: 110 PPSDVPA 116


>sp|NCPP_AERPE|PROBABLE inosine/xanthosine triphosphatase|Aeropyrum pernix (strain ATCC

Query: 3 PIDIPAQG 10
PI+ PA G
Sbjct: 76 PIEFPASG 83


>sp|SYR_HALWD|ARGININE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PPIDIPA 8
PP D+PA
Sbjct: 32 PPEDVPA 38


>sp|Y2021_HALSA|PUTATIVE heme-binding protein VNG_2021C|Halobacterium salinarum (strain ATCC

Query: 2 PPIDIPA 8
PP D+PA
Sbjct: 244 PPADLPA 250


>sp|AROE_METTH|SHIKIMATE dehydrogenase (NADP(+))|Methanothermobacter thermautotrophicus

Query: 1 DPPIDI 6
DPP+D+
Sbjct: 266 DPPLDV 271


>sp|FEN_HALMA|FLAP endonuclease 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 PPIDIPAQG 10
P +D PA+G
Sbjct: 147 PIVDAPAEG 155




83|SequenceR|420|411|YHRPNDPPID

>sp|MPTA_NATPD|GTP cyclohydrolase MptA|Natronomonas pharaonis (strain ATCC 35678

Query: 2 HRPNDPPI 9
HRPND PI
Sbjct: 34 HRPNDRPI 41


>sp|XACK_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacK|Haloferax volcanii (strain ATCC

Query: 1 YHRPND 6
YHRPN+
Sbjct: 228 YHRPNN 233


>sp|UVRC_METAC|UVRABC system protein C|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YHRPNDPP 8
Y+ NDPP
Sbjct: 286 YYSENDPP 293


>sp|HEM3_SULTO|PROBABLE porphobilinogen deaminase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PNDPPID 10
P DPP D
Sbjct: 94 PRDPPFD 100


>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 2 HRPNDPP 8
H PN PP
Sbjct: 203 HDPNKPP 209


>sp|HEM3_IGNH4|PROBABLE porphobilinogen deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 PNDPPID 10
P DPP D
Sbjct: 99 PRDPPYD 105


>sp|UVRC_METMA|UVRABC system protein C|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YHRPNDPP 8
Y+ NDPP
Sbjct: 292 YYSENDPP 299


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 HRPNDPP 8
H PND P
Sbjct: 184 HNPNDKP 190


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YHRPNDPP 8
YH P+ PP
Sbjct: 517 YHSPDLPP 524


>sp|HEM3_HYPBU|PROBABLE porphobilinogen deaminase|Hyperthermus butylicus (strain DSM 5456

Query: 4 PNDPPID 10
P DPP D
Sbjct: 97 PRDPPYD 103


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 3 RPNDPP 8
RPND P
Sbjct: 703 RPNDTP 708


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 3 RPNDPP 8
RPND P
Sbjct: 685 RPNDTP 690


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 YHRPNDPPI 9
YHR N P +
Sbjct: 314 YHRENAPGV 322


>sp|KAD_METBF|ADENYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YHRPNDPP 8
YHR +PP
Sbjct: 136 YHRTFNPP 143


>sp|RFCL_METMJ|REPLICATION factor C large subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 RPNDPPID 10
R +DPP D
Sbjct: 431 RDDDPPAD 438


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 3 RPNDPP 8
RPND P
Sbjct: 560 RPNDTP 565


>sp|RNH2_SACS2|RIBONUCLEASE HII|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PNDPPI 9
PN PPI
Sbjct: 182 PNPPPI 187


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 YHRPNDPPID 10
Y P+D P D
Sbjct: 328 YSEPSDAPYD 337


>sp|DLHH_SACS2|PUTATIVE carboxymethylenebutenolidase|Saccharolobus solfataricus (strain

Query: 6 DPPID 10
DPPID
Sbjct: 195 DPPID 199


>sp|SURE_METAC|5'-NUCLEOTIDASE SurE|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YHRPNDPPID 10
YH D PI+
Sbjct: 186 YHAEEDTPIE 195


>sp|Y376_METTP|UPF0282 protein Mthe_0376|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YHRPNDPPI 9
+H PNDP +
Sbjct: 78 HHNPNDPDL 86




84|SequenceR|425|416|FGSQGYHRPN

>sp|RL15_THEKO|LARGE ribosomal subunit protein uL15|Thermococcus kodakarensis (strain

Query: 1 FGSQGYHRP 9
G +G+HRP
Sbjct: 58 LGKRGFHRP 66


>sp|RL15_HYPBU|LARGE ribosomal subunit protein uL15|Hyperthermus butylicus (strain DSM

Query: 1 FGSQGYHRP 9
FG G++RP
Sbjct: 57 FGKHGFNRP 65


>sp|XACK_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacK|Haloferax volcanii (strain ATCC

Query: 6 YHRPN 10
YHRPN
Sbjct: 228 YHRPN 232


>sp|RL15_ARCFU|LARGE ribosomal subunit protein uL15|Archaeoglobus fulgidus (strain

Query: 1 FGSQGYHRP 9
FG G+ RP
Sbjct: 59 FGKHGFTRP 67


>sp|XYLG_SULAC|XYLOSE/ARABINOSE import ATP-binding protein XylG|Sulfolobus acidocaldarius (strain

Query: 5 GYHRPN 10
GYH+P+
Sbjct: 52 GYHKPD 57


>sp|PRIS_THEVO|DNA primase small subunit PriS|Thermoplasma volcanium (strain ATCC

Query: 2 GSQGYH 7
GS+GYH
Sbjct: 146 GSRGYH 151


>sp|FRHA_METJA|COENZYME F420 hydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 2 GSQGYHRPN 10
G +G H PN
Sbjct: 153 GGEGIHPPN 161


>sp|RL15_METKA|LARGE ribosomal subunit protein uL15|Methanopyrus kandleri (strain AV19

Query: 1 FGSQGYHRP 9
FG +G++RP
Sbjct: 57 FGKRGFNRP 65


>sp|TRKA2_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 1 FGSQGYHR 8
FG++G HR
Sbjct: 223 FGNEGPHR 230


>sp|RL15_METST|LARGE ribosomal subunit protein uL15|Methanosphaera stadtmanae (strain

Query: 1 FGSQGYHRP 9
FG G+ RP
Sbjct: 55 FGKYGFKRP 63


>sp|PSB_ACIB4|PROTEASOME subunit beta|Aciduliprofundum boonei (strain DSM 19572

Query: 1 FGSQGYH 7
F S+GYH
Sbjct: 111 FDSKGYH 117


>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 FGSQGYH 7
FG+QGY+
Sbjct: 247 FGAQGYY 253


>sp|ENDA_NATPD|TRNA-SPLICING endonuclease|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FGSQGYHRPN 10
+ S GY RP+
Sbjct: 21 YDSSGYGRPD 30


>sp|Y1428_METJA|TPR repeat-containing protein MJ1428|Methanocaldococcus jannaschii

Query: 6 YHRPN 10
YH+PN
Sbjct: 480 YHKPN 484


>sp|GADH_PICTO|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Picrophilus torridus (strain ATCC 700027

Query: 2 GSQGYH 7
SQGYH
Sbjct: 440 ASQGYH 445


>sp|RL15_METTH|LARGE ribosomal subunit protein uL15|Methanothermobacter

Query: 1 FGSQGYHRP 9
FG G+ RP
Sbjct: 55 FGKYGFKRP 63


>sp|SOR_ACIAM|SULFUR oxygenase/reductase|Acidianus ambivalens (Desulfurolobus

Query: 1 FGSQGYHR 8
FG++G+H+
Sbjct: 212 FGAKGFHQ 219


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GSQGYHRP 9
GS GY RP
Sbjct: 158 GSVGYLRP 165


>sp|RL3_METTH|LARGE ribosomal subunit protein uL3|Methanothermobacter

Query: 2 GSQGYHR 8
G GYHR
Sbjct: 251 GQMGYHR 257


>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GSQGYH 7
SQGYH
Sbjct: 442 ASQGYH 447


>sp|RL3_NANEQ|LARGE ribosomal subunit protein uL3|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 GSQGYHR 8
G GYHR
Sbjct: 242 GQMGYHR 248


>sp|RL3_SULTO|LARGE ribosomal subunit protein uL3|Sulfurisphaera tokodaii (strain DSM

Query: 2 GSQGYHR 8
G GYHR
Sbjct: 260 GQMGYHR 266




85|SequenceR|430|421|CLSAFFGSQG

>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 2 LSAFFGSQ 9
LSA+FGS+
Sbjct: 731 LSAYFGSE 738


>sp|DNLI_METTP|DNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LSAFFGSQG 10
L+AF GS+G
Sbjct: 104 LAAFSGSEG 112


>sp|RADB_METST|DNA repair and recombination protein|Methanosphaera stadtmanae

Query: 1 CLSAFFGSQG 10
C++ F+G G
Sbjct: 31 CITQFYGPPG 40




86|SequenceR|435|426|KQDQWCLSAF

>sp|CBIM1_METPE|PUTATIVE cobalt transport protein CbiM|Methanosphaerula palustris (strain

Query: 4 QWCLSAF 10
QWCL F
Sbjct: 11 QWCLFWF 17


>sp|METXA_METFP|HOMOSERINE O-acetyltransferase|Methanobacterium formicicum (strain DSM 3637

Query: 4 QWCLS 8
QWC+S
Sbjct: 160 QWCVS 164




87|SequenceR|440|431|FSKESKQDQW

>sp|BIOB_NATPD|BIOTIN synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SKESKQDQW 10
SKE + D+W
Sbjct: 121 SKEKRPDEW 129


>sp|Y1032_METJA|UNCHARACTERIZED protein MJ1032|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSKESKQDQW 10
F+K SK+D++
Sbjct: 347 FTKSSKEDKF 356


>sp|PMDHL_THEKO|PHOSPHOMEVALONATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 KESKQDQW 10
+ES QD W
Sbjct: 266 RESFQDDW 273


>sp|NADA_SACS2|QUINOLINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FSKESKQDQW 10
FSKE+K +++
Sbjct: 224 FSKENKNEEF 233


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 FSKESKQDQW 10
F+ ESK ++W
Sbjct: 216 FNSESKIEEW 225


>sp|RPO1C_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrobaculum aerophilum (strain ATCC

Query: 4 ESKQDQW 10
+SK D+W
Sbjct: 230 DSKNDEW 236


>sp|DLHH_SACS2|PUTATIVE carboxymethylenebutenolidase|Saccharolobus solfataricus (strain

Query: 1 FSKESKQDQW 10
++KE+ +D W
Sbjct: 236 YNKEAAEDAW 245




88|SequenceR|445|436|HDEECFSKES

>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EECFSK 8
EECFS+
Sbjct: 491 EECFSR 496


>sp|Y3537_METJA|UNCHARACTERIZED protein MJECL37|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EECFSK 8
EECF K
Sbjct: 9 EECFQK 14




89|SequenceR|450|441|NVLAAHDEEC

>sp|AOCD_METTH|ORNITHINE cyclodeaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 NVLAAHDEEC 10
N LA HD EC
Sbjct: 236 NALATHDIEC 245


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 1 NVLAAHDEE 9
NV+ AH++E
Sbjct: 458 NVITAHEDE 466


>sp|RS12_IGNH4|SMALL ribosomal subunit protein uS12|Ignicoccus hospitalis (strain KIN4/I

Query: 1 NVLAAHDE 8
NV++ HDE
Sbjct: 95 NVISEHDE 102


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 VLAAHDE 8
+LAAHDE
Sbjct: 434 LLAAHDE 440


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 VLAAHDE 8
+LAAHDE
Sbjct: 434 LLAAHDE 440


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VLAAHDEE 9
VLAA DEE
Sbjct: 648 VLAAGDEE 655




90|SequenceR|455|446|QESEQNVLAA

***** No hits found ******


91|SequenceR|460|451|LEDDSQESEQ

***** No hits found ******


92|SequenceR|465|456|SSLTLLEDDS

>sp|Y1005_PYRIL|PROTEIN Pisl_1005|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SSLTLLEDD 9
S LTLL+DD
Sbjct: 111 SPLTLLQDD 119


>sp|Y011_PYRAR|PROTEIN Pars_0011|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SSLTLLEDD 9
S LTLL+DD
Sbjct: 111 SPLTLLDDD 119


>sp|RRP4_METKA|EXOSOME complex component Rrp4|Methanopyrus kandleri (strain AV19 /

Query: 3 LTLLEDDS 10
L+LLEDD+
Sbjct: 136 LSLLEDDA 143




93|SequenceR|470|461|ANGHPSSLTL

>sp|LYSJ_THEKO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 ANGHPSSLTL 10
NG P SLTL
Sbjct: 233 GNGFPVSLTL 242


>sp|CARA_SULTO|CARBAMOYL phosphate synthase small chain|Sulfurisphaera tokodaii (strain

Query: 2 NGHPSSLT 9
NG+P SLT
Sbjct: 43 NGYPESLT 50


>sp|CARA_SULAC|CARBAMOYL phosphate synthase small chain|Sulfolobus acidocaldarius (strain

Query: 2 NGHPSSLT 9
NG+P SLT
Sbjct: 42 NGYPESLT 49


>sp|LYSJ_PYRFU|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 ANGHPSSLTL 10
NG P SLTL
Sbjct: 233 GNGVPVSLTL 242


>sp|LYSJ_PYRAB|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 ANGHPSSLTL 10
NG P SLTL
Sbjct: 233 GNGVPVSLTL 242


>sp|RL4_SULTO|LARGE ribosomal subunit protein uL4|Sulfurisphaera tokodaii (strain DSM

Query: 3 GHPSSLTL 10
GHP LT+
Sbjct: 240 GHPGRLTI 247


>sp|RTCA_SACI4|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 2 NGHPSSLTL 10
NG+PS+ +L
Sbjct: 169 NGNPSAFSL 177


>sp|RTCA_SACI3|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 2 NGHPSSLTL 10
NG+PS+ +L
Sbjct: 169 NGNPSAFSL 177


>sp|RTCA_SACI6|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 2 NGHPSSLTL 10
NG+PS+ +L
Sbjct: 169 NGNPSAFSL 177


>sp|RTCA_SACI7|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 2 NGHPSSLTL 10
NG+PS+ +L
Sbjct: 169 NGNPSAFSL 177


>sp|RTCA_SACI2|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 2 NGHPSSLTL 10
NG+PS+ +L
Sbjct: 169 NGNPSAFSL 177


>sp|RTCA_SACI1|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 2 NGHPSSLTL 10
NG+PS+ +L
Sbjct: 169 NGNPSAFSL 177


>sp|CARA_METS5|CARBAMOYL phosphate synthase small chain|Metallosphaera sedula (strain ATCC

Query: 2 NGHPSSLT 9
NG+P S+T
Sbjct: 42 NGYPESMT 49


>sp|TRUA_PYRAR|TRNA pseudouridine synthase A|Pyrobaculum arsenaticum (strain DSM

Query: 3 GHPSSL 8
GHP+SL
Sbjct: 19 GHPNSL 24


>sp|SAHH_SULTO|ADENOSYLHOMOCYSTEINASE tokodaii (strain DSM 16993

Query: 1 ANGHPSSL 8
A GHPS +
Sbjct: 341 AEGHPSEV 348


>sp|SAHH_SULAC|ADENOSYLHOMOCYSTEINASE acidocaldarius (strain ATCC 33909

Query: 1 ANGHPSSL 8
A GHPS +
Sbjct: 341 AEGHPSEV 348


>sp|SAHH_SACS2|ADENOSYLHOMOCYSTEINASE solfataricus (strain ATCC 35092

Query: 1 ANGHPSSL 8
A GHPS +
Sbjct: 343 AEGHPSEV 350


>sp|SAHH_PYRAE|ADENOSYLHOMOCYSTEINASE aerophilum (strain ATCC 51768

Query: 1 ANGHPSSL 8
A GHPS +
Sbjct: 365 AEGHPSEV 372


>sp|SAHH_AERPE|ADENOSYLHOMOCYSTEINASE pernix (strain ATCC 700893

Query: 1 ANGHPSSL 8
A GHPS +
Sbjct: 345 AEGHPSEV 352


>sp|NADM_HALSA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ANGHPSSL 8
ANGH S L
Sbjct: 169 ANGHDSGL 176


>sp|NADM_HALS3|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ANGHPSSL 8
ANGH S L
Sbjct: 169 ANGHDSGL 176


>sp|TRUA_PYRAE|TRNA pseudouridine synthase A|Pyrobaculum aerophilum (strain ATCC

Query: 3 GHPSSL 8
GHP+SL
Sbjct: 19 GHPNSL 24


>sp|RL24_NANEQ|LARGE ribosomal subunit protein uL24|Nanoarchaeum equitans (strain

Query: 4 HPSSLTL 10
HPS LT+
Sbjct: 103 HPSKLTI 109


>sp|RL4_AERPE|LARGE ribosomal subunit protein uL4|Aeropyrum pernix (strain ATCC 700893

Query: 3 GHPSSLTL 10
GHP LT+
Sbjct: 247 GHPGRLTI 254


>sp|RL4_SULAC|LARGE ribosomal subunit protein uL4|Sulfolobus acidocaldarius (strain

Query: 3 GHPSSLTL 10
GHP LT+
Sbjct: 240 GHPGRLTI 247


>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 2 NGHPSSLT 9
NG+P SLT
Sbjct: 298 NGNPLSLT 305




94|SequenceR|475|466|PKDGNANGHP

>sp|DLD_ARCFU|D-LACTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DGNANGHP 10
DGN + HP
Sbjct: 361 DGNVHQHP 368


>sp|MUTL_METLZ|DNA mismatch repair protein MutL|Methanocorpusculum labreanum (strain

Query: 1 PKDGNANGHP 10
P+D + N HP
Sbjct: 297 PRDVDVNVHP 306


>sp|ARGJ_METMP|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PKDGNANGH 9
PK ANGH
Sbjct: 15 PKGFKANGH 23


>sp|ARGJ_METM7|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 PKDGNANGH 9
PK ANGH
Sbjct: 15 PKGFKANGH 23


>sp|ARGJ_METM6|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 PKDGNANGH 9
PK ANGH
Sbjct: 15 PKGFKANGH 23




95|SequenceR|480|471|KKVGHPKDGN

>sp|Y2147_ARCFU|UNCHARACTERIZED protein AF_2147|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KKVGHPKDGN 10
KK+G+P GN
Sbjct: 59 KKLGYPVSGN 68


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 1 KKVGHPKD 8
+KVGHP D
Sbjct: 142 EKVGHPTD 149


>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKVGHPKDGN 10
K VG+PK GN
Sbjct: 335 KGVGNPKTGN 344


>sp|DIPPS_THEKO|BIFUNCTIONAL IPC transferase and DIPP|Thermococcus kodakarensis (strain ATCC

Query: 1 KKVGHPK 7
KKV HPK
Sbjct: 424 KKVSHPK 430


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 VGHPKDG 9
VG P+DG
Sbjct: 99 VGRPRDG 105


>sp|IDI2_METKA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanopyrus kandleri (strain AV19 /

Query: 4 GHPKDG 9
GHPK G
Sbjct: 66 GHPKTG 71


>sp|TRPD_PYRAR|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 VGHPKDG 9
VG P+DG
Sbjct: 301 VGDPRDG 307


>sp|Y810_METJA|PROTEIN MJ0810|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KVGHPKD 8
KV HPK+
Sbjct: 112 KVNHPKE 118


>sp|DEOC_HALLT|DEOXYRIBOSE-PHOSPHATE aldolase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 GHPKDGN 10
GHP DG+
Sbjct: 209 GHPGDGD 215


>sp|PYRB_METST|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaera stadtmanae

Query: 1 KKVGHPKDG 9
+KV H KDG
Sbjct: 36 QKVCHEKDG 44


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 3 VGHPKDG 9
+G PKDG
Sbjct: 97 LGRPKDG 103


>sp|RIBL_HALSA|FAD synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 KVGHPKD 8
++GHP+D
Sbjct: 68 RIGHPED 74


>sp|RIBL_HALS3|FAD synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 KVGHPKD 8
++GHP+D
Sbjct: 68 RIGHPED 74


>sp|Y912_METJA|UNCHARACTERIZED protein MJ0912|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VGHPKDG 9
VG P+DG
Sbjct: 188 VGQPRDG 194


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 KKVGHPKD 8
+KVGHP +
Sbjct: 148 EKVGHPTN 155


>sp|GLMU_METM7|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C7 /

Query: 2 KVGHPKD 8
KVGHP++
Sbjct: 122 KVGHPEN 128


>sp|PYRB_METTP|ASPARTATE carbamoyltransferase catalytic subunit|Methanothrix

Query: 3 VGHPKDGN 10
+ HPK+G+
Sbjct: 104 IRHPKEGS 111


>sp|RL22_THEPD|LARGE ribosomal subunit protein uL22|Thermofilum pendens (strain DSM

Query: 1 KKVGHPKD 8
KKVGH D
Sbjct: 66 KKVGHRSD 73


>sp|RIBL_METKA|FAD synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 VGHPKD 8
+GHP+D
Sbjct: 74 LGHPRD 79




96|SequenceR|485|476|QKKSPKKVGH

>sp|PRPB_AERPE|2-METHYLISOCITRATE lyase|Aeropyrum pernix (strain ATCC 700893

Query: 5 PKKVGH 10
PKK GH
Sbjct: 124 PKKCGH 129


>sp|SYR_ARCFU|ARGININE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QKKSPKKVG 9
+KKSPK++
Sbjct: 42 RKKSPKEIA 50


>sp|CIMA_METKA|PUTATIVE (R)-citramalate synthase CimA|Methanopyrus kandleri (strain AV19 /

Query: 5 PKKVGH 10
P+KVGH
Sbjct: 316 PEKVGH 321


>sp|RS19_THEPD|SMALL ribosomal subunit protein uS19|Thermofilum pendens (strain DSM 2475

Query: 4 SPKKVGH 10
+P+K+GH
Sbjct: 104 TPEKIGH 110


>sp|HIS7_META3|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QKKSPKKVGH 10
+KK+ K+ GH
Sbjct: 82 EKKNIKRFGH 91




97|SequenceR|490|481|AAPEQQKKSP

>sp|TET_PYRHO|TETRAHEDRAL aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PEQQKKSP 10
PE +KK+P
Sbjct: 127 PEDRKKAP 134


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 EQQKKSP 10
EQ+KK+P
Sbjct: 61 EQEKKNP 67


>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 PEQQKKSP 10
PEQ KSP
Sbjct: 463 PEQVMKSP 470




98|SequenceR|495|486|EPPPPAAPEQ

>sp|IF6_METB6|TRANSLATION initiation factor 6|Methanoregula boonei (strain DSM 21154

Query: 4 PPAAPEQ 10
PP APE+
Sbjct: 27 PPEAPEE 33


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 1 EPPPPAAPE 9
EPP P PE
Sbjct: 86 EPPHPLNPE 94


>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PPPAAPEQ 10
PP APEQ
Sbjct: 273 PPVVAPEQ 280


>sp|RL24_PICTO|LARGE ribosomal subunit protein uL24|Picrophilus torridus (strain ATCC

Query: 3 PPPAAPEQ 10
PPP PE+
Sbjct: 105 PPPEVPEE 112


>sp|HCGF_METTH|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanothermobacter

Query: 1 EPPPPAA 7
EPP P+A
Sbjct: 59 EPPEPSA 65


>sp|GATE_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain DSM

Query: 1 EPPPPAAPE 9
EPP APE
Sbjct: 88 EPPHDVAPE 96


>sp|GATE_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C7 /

Query: 1 EPPPPAAPE 9
EPP APE
Sbjct: 88 EPPHDVAPE 96


>sp|PRIS_NATPD|DNA primase small subunit PriS|Natronomonas pharaonis (strain ATCC

Query: 3 PPPAAPEQ 10
PPPAA E+
Sbjct: 24 PPPAANER 31


>sp|PRIS_HALMA|DNA primase small subunit PriS|Haloarcula marismortui (strain ATCC

Query: 3 PPPAAPEQ 10
PPPAA E+
Sbjct: 24 PPPAANER 31


>sp|DNLI1_THEPD|DNA ligase 1|Thermofilum pendens (strain DSM 2475

Query: 1 EPPPPAAPE 9
EP PPA E
Sbjct: 82 EPQPPAITE 90


>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PPPPAAPE 9
PPPP E
Sbjct: 156 PPPPELDE 163


>sp|DP2S_METTH|DNA polymerase II small subunit|Methanothermobacter thermautotrophicus

Query: 3 PPPAAPEQ 10
P PA PE+
Sbjct: 328 PQPAIPEE 335


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 2 PPPPAAP 8
PPPP P
Sbjct: 262 PPPPVKP 268


>sp|CAS2B_PYRAE|CRISPR-ASSOCIATED endoribonuclease Cas2 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PPPPA 6
PPPPA
Sbjct: 80 PPPPA 84


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 EPPPPAAP 8
E PPP P
Sbjct: 304 EAPPPKLP 311


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 2 PPPPAAPEQ 10
P PP AP++
Sbjct: 132 PTPPDAPKE 140




99|SequenceR|500|491|LLDVDEPPPP

>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 1 LLDVDEPPP 9
+LD+DEP P
Sbjct: 425 VLDIDEPNP 433


>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLDVDEPPPP 10
LL VD+PP P
Sbjct: 498 LLLVDDPPTP 507


>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 VDEPPP 9
VDEPPP
Sbjct: 197 VDEPPP 202


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 1 LLDVDEPPP 9
L+++DE PP
Sbjct: 72 LVEMDEEPP 80


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 LLDVDEPP 8
+L +DEPP
Sbjct: 267 ILGIDEPP 274


>sp|SYT_CENSY|THREONINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 5 DEPPP 9
DEPPP
Sbjct: 192 DEPPP 196


>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 LDVDEPPP 9
LDV+E PP
Sbjct: 897 LDVNETPP 904


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DVDEPPP 9
D+DEP P
Sbjct: 670 DIDEPKP 676


>sp|TRPC_PYRAE|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 6 EPPPP 10
EPPPP
Sbjct: 18 EPPPP 22


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis (strain

Query: 1 LLDVDEPPP 9
LL +DEP P
Sbjct: 817 LLILDEPTP 825


>sp|RAD50_PYRHO|DNA double-strand break repair Rad50|Pyrococcus horikoshii (strain ATCC

Query: 1 LLDVDEPPP 9
LL +DEP P
Sbjct: 815 LLILDEPTP 823


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 1 LLDVDEPPP 9
LL +DEP P
Sbjct: 818 LLILDEPTP 826


>sp|RAD50_PYRAB|DNA double-strand break repair Rad50|Pyrococcus abyssi (strain GE5 /

Query: 1 LLDVDEPPP 9
LL +DEP P
Sbjct: 816 LLILDEPTP 824


>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 1 LLDVDEPPP 9
LL +DEP P
Sbjct: 820 LLILDEPTP 828


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LLDVDEPPP 9
+L +D PPP
Sbjct: 26 ILIIDTPPP 34


>sp|CAS1B_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LLDVDEP 7
LLD DEP
Sbjct: 137 LLDKDEP 143


>sp|GATE_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LLDVDEPPP 9
L++ DE PP
Sbjct: 81 LVEADEEPP 89


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 1 LLDVDEPPPP 10
+++ D+PP P
Sbjct: 49 IINADKPPGP 58


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 1 LLDVDEPPP 9
L++ DE PP
Sbjct: 81 LVEADEEPP 89


>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 4 VDEPPP 9
V+EPPP
Sbjct: 132 VEEPPP 137


>sp|GATE_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 LLDVDEPPP 9
L++ DE PP
Sbjct: 82 LVEADEEPP 90


>sp|GATE_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 LLDVDEPPP 9
L++ DE PP
Sbjct: 82 LVEADEEPP 90


>sp|GATE_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 LLDVDEPPP 9
L++ DE PP
Sbjct: 82 LVEADEEPP 90


>sp|GATE_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 LLDVDEPPP 9
L++ DE PP
Sbjct: 82 LVEADEEPP 90


>sp|GATE_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 LLDVDEPPP 9
L++ DE PP
Sbjct: 82 LVEADEEPP 90


>sp|GATE_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 LLDVDEPPP 9
L++ DE PP
Sbjct: 82 LVEADEEPP 90


>sp|GATE_PYRIL|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum islandicum (strain DSM

Query: 1 LLDVDEPPP 9
L+++DE PP
Sbjct: 80 LVELDEEPP 88


>sp|RNP2_AERPE|RIBONUCLEASE P protein component 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 LLDVDEPPP 9
+L +D PPP
Sbjct: 20 VLSLDGPPP 28


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 1 LLDVDEPPP 9
L+++DE PP
Sbjct: 80 LVELDEEPP 88


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 1 LLDVDEPPP 9
L+++DE PP
Sbjct: 80 LVELDEEPP 88


>sp|GLCDH_METAR|GLUCOSE 1-dehydrogenase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LLDVDEPPP 9
++DVD P P
Sbjct: 16 VIDVDRPRP 24


>sp|DHQS_METAR|3-DEHYDROQUINATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LLDVDEP 7
L+DVD+P
Sbjct: 173 LVDVDDP 179


>sp|GATE_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus solfataricus (strain

Query: 1 LLDVDEPPP 9
L++ DE PP
Sbjct: 82 LVEADEEPP 90


>sp|Y1320_NATPD|PUTATIVE HTH-type transcriptional regulatory protein|Natronomonas pharaonis

Query: 3 DVDEPPPP 10
DVDEP P
Sbjct: 198 DVDEPEAP 205


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 DEPPP 9
DEPPP
Sbjct: 435 DEPPP 439


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC

Query: 1 LLDVDEPPPP 10
++ VD+PP P
Sbjct: 58 MIVVDKPPGP 67


>sp|HIS1_HALSA|ATP phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 LLDVDEP 7
+LDVDEP
Sbjct: 237 VLDVDEP 243


>sp|HIS1_HALS3|ATP phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 LLDVDEP 7
+LDVDEP
Sbjct: 237 VLDVDEP 243


>sp|HEM3_AERPE|PROBABLE porphobilinogen deaminase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LLDVDEPP 8
L D+D+PP
Sbjct: 214 LRDLDKPP 221




100|SequenceR|505|496|SGELGLLDVD

>sp|UPPS_METAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina

Query: 1 SGELGLLDVD 10
SG+L L DVD
Sbjct: 175 SGKLSLEDVD 184


>sp|Y215_NITMS|MEMO1 family protein Nmar_0215|Nitrosopumilus maritimus (strain SCM1)

Query: 4 LGLLDVD 10
LGL+DVD
Sbjct: 101 LGLVDVD 107


>sp|G6PI_METMP|PROBABLE glucose-6-phosphate isomerase|Methanococcus maripaludis (strain

Query: 1 SGELGLLDV 9
+GE G LDV
Sbjct: 47 NGEFGFLDV 55


>sp|PRNK_METJA|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase MJ1315|Methanocaldococcus jannaschii (strain

Query: 3 ELGLLDVD 10
ELGLLD D
Sbjct: 352 ELGLLDRD 359


>sp|TRPB_PYRIL|TRYPTOPHAN synthase beta chain|Pyrobaculum islandicum (strain DSM 4184

Query: 5 GLLDVD 10
GLLDVD
Sbjct: 398 GLLDVD 403


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 ELGLLDVD 10
E+GL DVD
Sbjct: 378 EIGLTDVD 385


>sp|HIS52_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 3 ELGLLDV 9
ELGL+D+
Sbjct: 58 ELGLIDI 64


>sp|HEM1_METB6|GLUTAMYL-TRNA reductase|Methanoregula boonei (strain DSM 21154

Query: 1 SGELGLL 7
SGE+GLL
Sbjct: 179 SGEMGLL 185




101|SequenceR|510|501|SNSMASGELG

***** No hits found ******


102|SequenceR|515|506|APPSFSNSMA

>sp|DTD_METST|D-AMINOACYL-TRNA deacylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PSFSNSM 9
PSFSN+M
Sbjct: 91 PSFSNAM 97


>sp|AGLB2_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 APPSFSNSMA 10
A P F+NS+A
Sbjct: 421 ALPCFANSLA 430


>sp|FLAB2_ARCFU|PROBABLE flagellin 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PPSFSN 7
PPSF+N
Sbjct: 198 PPSFTN 203




103|SequenceR|520|511|NTPPAAPPSF

>sp|Y1096_ARCFU|UNCHARACTERIZED protein AF_1096|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NTPPAAPPS 9
N PAAPPS
Sbjct: 40 NVAPAAPPS 48


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 NTPPAAPPS 9
+ PPA PPS
Sbjct: 370 SNPPAKPPS 378


>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 TPPAAPPSF 10
TPP PSF
Sbjct: 530 TPPTTHPSF 538


>sp|SYFB_HALSA|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 TPPAAPPSF 10
TPP PSF
Sbjct: 513 TPPTTHPSF 521


>sp|SYFB_HALS3|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 TPPAAPPSF 10
TPP PSF
Sbjct: 513 TPPTTHPSF 521


>sp|SURE_METTH|5'-NUCLEOTIDASE SurE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 TPPAAPP 8
TPP +PP
Sbjct: 235 TPPPSPP 241


>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 2 TPPAAPPSF 10
TPP A P++
Sbjct: 434 TPPYAMPTY 442


>sp|SYFB_NATPD|PHENYLALANINE--TRNA ligase beta subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 2 TPPAAPPSF 10
TPP PSF
Sbjct: 517 TPPTDHPSF 525


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 1 NTPPAAPPS 9
+TPPAA S
Sbjct: 809 DTPPAAAAS 817


>sp|Y317_METJA|UNCHARACTERIZED protein MJ0317|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NTPPAAPP 8
N PP PP
Sbjct: 153 NNPPYKPP 160




104|SequenceR|525|516|SLLESNTPPA

>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 SLLESNTPPA 10
SLL S TPPA
Sbjct: 215 SLLGSATPPA 224


>sp|APGM_METS3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanobrevibacter smithii (strain ATCC

Query: 3 LESNTPPA 10
+E+N PPA
Sbjct: 214 IENNEPPA 221


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SLLESNTPPA 10
SLL S +PPA
Sbjct: 215 SLLGSASPPA 224


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SLLESNTPPA 10
SLL S +PPA
Sbjct: 215 SLLGSASPPA 224


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 LLESNTPP 9
L ESN PP
Sbjct: 203 LRESNLPP 210


>sp|DNAG_METMP|DNA primase DnaG|Methanococcus maripaludis (strain DSM 14266

Query: 2 LLESNTP 8
++ESNTP
Sbjct: 278 VIESNTP 284




105|SequenceR|530|521|GGFLDSLLES

>sp|DIPPS_PYRFU|BIFUNCTIONAL IPC transferase and DIPP|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GGFLDSLLE 9
GGF DS+L+
Sbjct: 314 GGFFDSILD 322


>sp|AIPS_METTH|ARCHAETIDYLINOSITOL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 GGFLDSLLE 9
GGFLDS L+
Sbjct: 85 GGFLDSTLD 93


>sp|HIS7_METTH|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GFLDSLLES 10
GFLD +LES
Sbjct: 37 GFLDHMLES 45


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GFLDSLLE 9
GFLD LLE
Sbjct: 419 GFLDLLLE 426


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 2 GFLDSLLE 9
GF+D LLE
Sbjct: 815 GFIDDLLE 822


>sp|DIPPS_THEKO|BIFUNCTIONAL IPC transferase and DIPP|Thermococcus kodakarensis (strain ATCC

Query: 1 GGFLDSLLE 9
GG++DS+L+
Sbjct: 309 GGYVDSILD 317


>sp|DIPPS_ARCFU|BIFUNCTIONAL IPC transferase and DIPP|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGFLDSLLE 9
GG++DS+L+
Sbjct: 374 GGYVDSILD 382


>sp|AIPS_PYRHO|ARCHAETIDYLINOSITOL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GGFLDSLLE 9
GGFLDS ++
Sbjct: 81 GGFLDSTID 89


>sp|Y799_METJA|UNCHARACTERIZED protein MJ0799|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGFLDSLLE 9
GG+L +LLE
Sbjct: 203 GGWLGNLLE 211


>sp|SRP54_META3|SIGNAL recognition particle 54 kDa|Methanococcus aeolicus (strain ATCC

Query: 2 GFLDSLLE 9
G LDSLLE
Sbjct: 297 GDLDSLLE 304


>sp|SRP54_METVS|SIGNAL recognition particle 54 kDa|Methanococcus vannielii (strain ATCC

Query: 2 GFLDSLLE 9
G LDSLLE
Sbjct: 297 GDLDSLLE 304


>sp|AIPS_SACS2|ARCHAETIDYLINOSITOL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GGFLDSLLE 9
G FLDS L+
Sbjct: 84 GSFLDSTLD 92


>sp|SRP54_METM7|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C7 /

Query: 2 GFLDSLLE 9
G LDSLLE
Sbjct: 297 GDLDSLLE 304


>sp|SRP54_METM6|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C6 /

Query: 2 GFLDSLLE 9
G LDSLLE
Sbjct: 297 GDLDSLLE 304




106|SequenceR|535|526|GAAGGGGFLD

>sp|PURP2_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 2|Methanosarcina mazei (strain ATCC

Query: 1 GAAGGGGFL 9
GA GG GF
Sbjct: 158 GAKGGKGFF 166


>sp|PURP1_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 1|Methanosarcina mazei (strain ATCC

Query: 1 GAAGGGGFL 9
GA GG GF
Sbjct: 158 GAKGGKGFF 166


>sp|PURP_METAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina acetivorans (strain ATCC

Query: 1 GAAGGGGFL 9
GA GG GF
Sbjct: 158 GAKGGKGFF 166


>sp|MCR_METS5|MALONYL CoA reductase (NADP)|Metallosphaera sedula (strain ATCC 51363

Query: 1 GAAGGG 6
GAAGGG
Sbjct: 336 GAAGGG 341


>sp|PURP_METBU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcoides burtonii (strain DSM

Query: 1 GAAGGGGFL 9
GA GG GF
Sbjct: 157 GAKGGRGFF 165


>sp|DMRX_METMA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GAAGGGGFLD 10
G G G FLD
Sbjct: 9 GITGAGHFLD 18


>sp|PURP_METBF|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GAAGGGGFL 9
GA GG GF
Sbjct: 158 GAKGGKGFF 166


>sp|PURP_METTP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothrix thermoacetophila (strain

Query: 1 GAAGGGGFL 9
GA GG GF
Sbjct: 158 GAKGGKGFF 166


>sp|GCH3_AERPE|GTP cyclohydrolase III|Aeropyrum pernix (strain ATCC 700893

Query: 2 AAGGGGFL 9
AAG GGF+
Sbjct: 47 AAGYGGFV 54




107|SequenceR|540|531|GAQTPGAAGG

>sp|Y887_METTH|UPF0104 membrane protein MTH_887|Methanothermobacter thermautotrophicus

Query: 4 TPGAAGG 10
TPGAAGG
Sbjct: 103 TPGAAGG 109


>sp|PMK_SACS2|PHOSPHOMEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 AQTPGAAGG 10
A +PGA GG
Sbjct: 277 ALSPGAGGG 285


>sp|MCRG_METBF|METHYL-COENZYME M reductase subunit gamma|Methanosarcina barkeri (strain Fusaro /

Query: 2 AQTPGAAGG 10
A TPGAA G
Sbjct: 72 AATPGAAAG 80


>sp|MVK_METJA|MEVALONATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GAQTPGAAGG 10
GA+ GA GG
Sbjct: 270 GAKLTGAGGG 279


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 1 GAQTPGAAGG 10
GA PG++GG
Sbjct: 146 GAMLPGSSGG 155




108|SequenceR|545|536|EVGSQGAQTP

>sp|RL19E_METVA|LARGE ribosomal subunit protein eL19|Methanococcus vannielii

Query: 3 GSQGAQTP 10
G++GA+TP
Sbjct: 82 GAKGARTP 89


>sp|FTSZ2_METJA|CELL division protein FtsZ 2|Methanocaldococcus jannaschii (strain

Query: 1 EVGSQGAQT 9
E+G QGA+T
Sbjct: 58 EIGIQGAET 66




109|SequenceR|550|541|PHFVDEVGSQ

>sp|AHBD_METBF|ADOMET-DEPENDENT heme synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 HFVDEVGS 9
HF+DEV S
Sbjct: 46 HFIDEVAS 53


>sp|LYSJ_PYRAB|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 PHFVDEVGSQ 10
P +V+EVG+Q
Sbjct: 43 PKWVEEVGNQ 52


>sp|TYW31_THEKO|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 PHFVDEVGS 9
PHF D+V S
Sbjct: 61 PHFGDKVNS 69


>sp|ILVC_METLZ|KETOL-ACID reductoisomerase (NADP(+))|Methanocorpusculum labreanum (strain

Query: 2 HFVDEVGSQ 10
H ++EVGS+
Sbjct: 311 HLIEEVGSE 319


>sp|TYW31_PYRHO|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 PHFVDEVGSQ 10
PHF D+V ++
Sbjct: 60 PHFGDKVNAK 69


>sp|TYW31_PYRFU|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 PHFVDEVGSQ 10
PHF D+V ++
Sbjct: 60 PHFGDKVNAK 69


>sp|OGG1_SULTO|8-OXOGUANINE DNA glycosylase/AP lyase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 HFVDEVGS 9
HF++E+G+
Sbjct: 151 HFLNEIGT 158


>sp|PYRG_AERPE|CTP synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PHFVDEVGSQ 10
PH DE+ S+
Sbjct: 118 PHITDEIKSR 127


>sp|IXTPA_THEAC|DITP/XTP pyrophosphatase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PHFVDEVG 8
P+FVD+ G
Sbjct: 59 PYFVDDSG 66


>sp|SURE_METBU|5'-NUCLEOTIDASE SurE|Methanococcoides burtonii (strain DSM 6242

Query: 1 PHFVDE 6
PHFV+E
Sbjct: 180 PHFVEE 185


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PHFVDEV 7
PHF +EV
Sbjct: 687 PHFTEEV 693


>sp|KU_ARCFU|NON-HOMOLOGOUS end joining protein Ku|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HFVDEVGS 9
H++DEV S
Sbjct: 164 HYIDEVRS 171


>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 VDEVGSQ 10
VDEVGS+
Sbjct: 60 VDEVGSK 66


>sp|GUAAB_SACS2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 3 FVDEVGSQ 10
FV+E+G Q
Sbjct: 7 FVEEIGPQ 14


>sp|T2MW_METWO|TYPE II restriction enzyme MwoI|Methanothermobacter wolfeii

Query: 1 PHFVDEVGS 9
PH+ DE+ S
Sbjct: 295 PHYDDEIVS 303


>sp|NTPTH_PYRCJ|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 FVDEVGS 9
F+DE+G+
Sbjct: 105 FIDEIGA 111


>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VDEVGSQ 10
VDE+GS+
Sbjct: 461 VDEIGSE 467


>sp|PYRG_METTH|CTP synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PHFVDEVGS 9
PH DE+ S
Sbjct: 119 PHITDEIKS 127


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 2 HFVDEVG 8
HF DE G
Sbjct: 335 HFADEYG 341


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 2 HFVDEVG 8
HF DE G
Sbjct: 335 HFADEYG 341


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 PHFVDEVGS 9
PH DE+ S
Sbjct: 115 PHITDEIKS 123


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PHFVDEVGS 9
PH DE+ S
Sbjct: 115 PHVTDEIKS 123


>sp|KHK_HALVD|KETOHEXOKINASE volcanii (strain ATCC 29605

Query: 2 HFVDEVGS 9
H VDE G+
Sbjct: 293 HLVDEAGT 300


>sp|ILVC_METHJ|KETOL-ACID reductoisomerase (NADP(+))|Methanospirillum hungatei JF-1 (strain

Query: 2 HFVDEVGSQ 10
H ++EVG +
Sbjct: 311 HLIEEVGKE 319


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 HFVDEVG 8
H VDE+G
Sbjct: 416 HIVDELG 422


>sp|SYT_PYRAE|THREONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HFVDEVG 8
H VDE+G
Sbjct: 417 HIVDELG 423


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HFVDEVG 8
H VDE+G
Sbjct: 417 HIVDELG 423




110|SequenceR|555|546|SAPGSPHFVD

>sp|HEM1_METTM|GLUTAMYL-TRNA reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 SAPGSPHFV 9
SA GSPH++
Sbjct: 227 SATGSPHYI 235


>sp|HEM1_METTH|GLUTAMYL-TRNA reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SAPGSPHFV 9
SA GSPH++
Sbjct: 230 SATGSPHYI 238


>sp|HEM1_METS3|GLUTAMYL-TRNA reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 SAPGSPHFV 9
SA G+PH++
Sbjct: 232 SATGAPHYI 240


>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 1 SAPGSPHFVD 10
+ PGSP +VD
Sbjct: 228 NTPGSPLYVD 237


>sp|KHSE_PYRIL|HOMOSERINE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SAPGSPHF 8
+A GSPHF
Sbjct: 121 AAAGSPHF 128


>sp|KHSE_PYRCJ|HOMOSERINE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 SAPGSPHF 8
+A GSPHF
Sbjct: 121 AAAGSPHF 128


>sp|KHSE_PYRAE|HOMOSERINE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SAPGSPHF 8
+A GSPHF
Sbjct: 121 AAAGSPHF 128


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 APGSPHFVD 10
+PG+PH +
Sbjct: 759 SPGAPHIAE 767


>sp|Y522_METJA|UNCHARACTERIZED protein MJ0522|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 APGSPHFV 9
APGSP+ +
Sbjct: 191 APGSPYIL 198


>sp|HEM1_METMA|GLUTAMYL-TRNA reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SAPGSPHFV 9
S G+PH++
Sbjct: 239 SGTGAPHYI 247


>sp|HEM1_METBF|GLUTAMYL-TRNA reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SAPGSPHFV 9
S G+PH++
Sbjct: 238 SGTGAPHYI 246


>sp|HEM1_METAC|GLUTAMYL-TRNA reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SAPGSPHFV 9
S G+PH++
Sbjct: 239 SGTGAPHYI 247


>sp|LPLA_AERPE|PUTATIVE lipoate-protein ligase A|Aeropyrum pernix (strain ATCC 700893

Query: 4 GSPHF 8
GSPHF
Sbjct: 8 GSPHF 12


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PGSPHFV 9
PG P+F+
Sbjct: 493 PGHPYFI 499


>sp|PYRC_ARCFU|DIHYDROOROTASE fulgidus (strain ATCC 49558

Query: 2 APGSPHFV 9
A GSP+FV
Sbjct: 180 ARGSPNFV 187


>sp|LEUC_PYRCJ|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum calidifontis (strain DSM

Query: 1 SAPGSPHFVD 10
A G PHF D
Sbjct: 85 KALGLPHFYD 94


>sp|KHSE_AERPE|HOMOSERINE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SAPGSPHF 8
+A G PHF
Sbjct: 134 AAAGQPHF 141


>sp|KDPC_HALSA|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 SAPGSPHFVD 10
S+ GSP +VD
Sbjct: 39 SSAGSPVYVD 48


>sp|KDPC_HALS3|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 SAPGSPHFVD 10
S+ GSP +VD
Sbjct: 39 SSAGSPVYVD 48




111|SequenceR|560|551|PTSQTSAPGS

>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PTSQTSAPGS 10
P S+T+ PGS
Sbjct: 602 PVSETNLPGS 611




112|SequenceR|565|556|TASRRPTSQT

>sp|RL18A_SULAC|LARGE ribosomal subunit protein eL20|Sulfolobus acidocaldarius (strain

Query: 1 TASRRPTSQ 9
+ASR PTSQ
Sbjct: 16 SASRFPTSQ 24




113|SequenceR|570|561|SASTSTASRR

***** No hits found ******


114|SequenceR|575|566|VRLTPSASTS

***** No hits found ******


115|SequenceR|580|571|TAGEGVRLTP

>sp|GLMU_META3|BIFUNCTIONAL protein GlmU|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 AGEGVRLTP 10
AG+G RL P
Sbjct: 8 AGKGTRLMP 16


>sp|GLMU_METM7|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C7 /

Query: 2 AGEGVRLTP 10
AG+G RL P
Sbjct: 8 AGKGTRLYP 16


>sp|GLMU_METM5|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C5 /

Query: 2 AGEGVRLTP 10
AG+G RL P
Sbjct: 8 AGKGTRLHP 16


>sp|GLMU_METMP|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain DSM 14266

Query: 2 AGEGVRLTP 10
AG+G RL P
Sbjct: 8 AGKGTRLHP 16


>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AGEGVRLTP 10
AGE + LTP
Sbjct: 132 AGESIDLTP 140


>sp|RNP3_METTH|RIBONUCLEASE P protein component 3|Methanothermobacter thermautotrophicus

Query: 3 GEGVRLTP 10
EGVRL P
Sbjct: 236 AEGVRLLP 243


>sp|AGLF_HALVD|UTP--GLUCOSE-1-PHOSPHATE uridylyltransferase AglF|Haloferax volcanii (strain ATCC 29605

Query: 2 AGEGVRLTP 10
AG+G RL P
Sbjct: 8 AGKGTRLRP 16


>sp|THIL_METKA|THIAMINE-MONOPHOSPHATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 TAGEGVRLT 9
T GEGVR+
Sbjct: 293 TEGEGVRIV 301


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 1 TAGEGVRLT 9
T G G++LT
Sbjct: 706 TQGRGIKLT 714


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 3 GEGVRLTP 10
GEG R TP
Sbjct: 32 GEGERTTP 39


>sp|ENDA_NATPD|TRNA-SPLICING endonuclease|Natronomonas pharaonis (strain ATCC 35678

Query: 3 GEGVRLTP 10
G GVRL P
Sbjct: 31 GAGVRLAP 38


>sp|TRIN_SULTO|PUTATIVE Tricorn-like protease N-terminal subunit|Sulfurisphaera tokodaii

Query: 1 TAGEGVRLTP 10
T+G+GV + P
Sbjct: 55 TSGQGVAIRP 64




116|SequenceR|585|576|GFPDFTAGEG

>sp|DNAG_PYRNV|DNA primase DnaG|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 FPDFTAGEG 10
PDF GEG
Sbjct: 339 LPDFLTGEG 347


>sp|AATF_HALVD|A-TYPE ATP synthase subunit F|Haloferax volcanii (strain ATCC 29605

Query: 1 GFPDFTAG 8
G PDFT G
Sbjct: 9 GSPDFTTG 16


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 GFPDFTAG 8
G PDF G
Sbjct: 112 GLPDFVVG 119


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 2 FPDFTAGE 9
FP+ TAGE
Sbjct: 1118 FPNTTAGE 1125


>sp|SECY_AERPE|PROTEIN translocase subunit SecY|Aeropyrum pernix (strain ATCC 700893

Query: 1 GFPDFTA 7
GFPD T
Sbjct: 227 GFPDLTG 233


>sp|NPD_SULAC|NAD-DEPENDENT protein deacetylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GFPDFTAGEG 10
G PDF +G
Sbjct: 33 GIPDFRGPQG 42


>sp|NPD_SACS2|NAD-DEPENDENT protein deacetylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GFPDFTAGEG 10
G PDF +G
Sbjct: 29 GIPDFRGPQG 38


>sp|GLNB4_METBA|NITROGEN fixation nifHD2 region GlnB-like|Methanosarcina barkeri

Query: 1 GFPDFT 6
GFP FT
Sbjct: 24 GFPSFT 29


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 GFPDFTAGE 9
GF D AGE
Sbjct: 363 GFEDVRAGE 371


>sp|SPSS_METKA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 PDFTAGEG 10
PDF G G
Sbjct: 208 PDFMVGSG 215


>sp|MOAC_METB6|PROBABLE cyclic pyranopterin monophosphate synthase|Methanoregula boonei

Query: 4 DFTAGEG 10
DFT G+G
Sbjct: 86 DFTEGDG 92


>sp|NPD_CALMQ|NAD-DEPENDENT protein deacetylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GFPDFTAGEG 10
G PDF +G
Sbjct: 36 GIPDFRGPQG 45


>sp|AATF_HALWD|A-TYPE ATP synthase subunit F|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GFPDFTAG 8
G P+FT G
Sbjct: 9 GSPEFTTG 16


>sp|G3P_PYRCJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GFPDFTAGE 9
GFP +TA +
Sbjct: 47 GFPVYTAAD 55


>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 GFPDFTAGEG 10
G+P+ + GEG
Sbjct: 348 GYPESSEGEG 357


>sp|NPD1_PYRAE|NAD-DEPENDENT protein deacetylase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GFPDFTAGEG 10
G PDF +G
Sbjct: 36 GIPDFRGPQG 45


>sp|Y1556_METMJ|UPF0200 protein Memar_1556|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 FPDFT 6
FPDFT
Sbjct: 101 FPDFT 105


>sp|MTAD_HALSA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Halobacterium salinarum (strain ATCC 700922

Query: 2 FPDFTAGEG 10
PDFT +G
Sbjct: 14 HPDFTVSDG 22


>sp|CAPPA_ARCFU|PHOSPHOENOLPYRUVATE carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FPDFTAGEG 10
+ DF AG+G
Sbjct: 144 YRDFVAGKG 152




117|SequenceR|590|581|PKSPAGFPDF

>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus (strain

Query: 3 SPAGFPDF 10
SP FPDF
Sbjct: 124 SPGNFPDF 131


>sp|Y215_METJA|UNCHARACTERIZED protein MJ0215|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PAGFPDF 10
PA FP+F
Sbjct: 27 PASFPNF 33


>sp|PUR2_METAR|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 PAGFPD 9
PAG+PD
Sbjct: 339 PAGYPD 344


>sp|PUR2_METBU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 PAGFPD 9
PAG+PD
Sbjct: 338 PAGYPD 343


>sp|ENO1_METHJ|ENOLASE 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 SPAGFPDF 10
+P G PDF
Sbjct: 167 APVGAPDF 174


>sp|PUR2_METAC|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PAGFPD 9
PAG+PD
Sbjct: 341 PAGYPD 346


>sp|RNH_SULTO|RIBONUCLEASE HI|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PKSPAGFPDF 10
PK+P G F
Sbjct: 12 PKNPGGIATF 21


>sp|SECY_AERPE|PROTEIN translocase subunit SecY|Aeropyrum pernix (strain ATCC 700893

Query: 4 PAGFPDF 10
P GFPD
Sbjct: 225 PNGFPDL 231


>sp|PUR2_METMA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PAGFPD 9
PAG+PD
Sbjct: 341 PAGYPD 346


>sp|TRPC_METS5|INDOLE-3-GLYCEROL phosphate synthase|Metallosphaera sedula (strain ATCC 51363

Query: 2 KSPAGFPD 9
KSP+GF +
Sbjct: 55 KSPSGFSE 62


>sp|NARC_HALMT|PROBABLE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 1 PKSPAGFPDF 10
P +PAG P+
Sbjct: 322 PNNPAGTPEL 331


>sp|ANTRB_HALVD|PUTATIVE ABC transporter anion-binding protein|Haloferax volcanii (strain

Query: 1 PKSPAGFPD 9
P +PA +PD
Sbjct: 253 PVNPAKYPD 261


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PAGFP 8
PAGFP
Sbjct: 34 PAGFP 38




118|SequenceR|595|586|LDQGSPKSPA

>sp|AROD_ARCFU|3-DEHYDROQUINATE dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GSPKSPA 10
GSPK+P
Sbjct: 175 GSPKAPG 181




119|SequenceR|600|591|LFSGLLDQGS

>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 1 LFSGLLDQGS 10
LFSG++ +GS
Sbjct: 313 LFSGIIRKGS 322


>sp|TAL_NITMS|PROBABLE transaldolase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 FSGLLDQG 9
FSG++D+G
Sbjct: 63 FSGMVDEG 70


>sp|ACDE_METBU|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanococcoides

Query: 3 SGLLDQG 9
SGL+DQG
Sbjct: 74 SGLVDQG 80


>sp|GLMM_META3|PHOSPHOGLUCOSAMINE mutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LFSGLLDQGS 10
LF+GLL+ G+
Sbjct: 50 LFAGLLNGGA 59


>sp|AATC_THEVO|A-TYPE ATP synthase subunit C|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LFSGLLDQGS 10
FSGL+D G+
Sbjct: 238 FFSGLVDGGN 247


>sp|COFD_METLZ|2-PHOSPHO-L-LACTATE transferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LFSGLLDQGS 10
LFSGLL+ S
Sbjct: 54 LFSGLLNTDS 63


>sp|MDH_PYRAE|MALATE dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FSGLLDQG 9
FSG+LD G
Sbjct: 141 FSGVLDAG 148


>sp|MDH_PYRCJ|MALATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 FSGLLDQG 9
FSG+LD G
Sbjct: 141 FSGVLDAG 148


>sp|MDH_PYRIL|MALATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 FSGLLDQG 9
FSG+LD G
Sbjct: 141 FSGVLDAG 148


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 1 LFSGLLDQG 9
LFSG + QG
Sbjct: 313 LFSGRIKQG 321


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 1 LFSGLLDQG 9
LFSG + QG
Sbjct: 313 LFSGRIKQG 321


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 1 LFSGLLDQG 9
LFSG + QG
Sbjct: 313 LFSGRIKQG 321


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 1 LFSGLLDQG 9
LFSG + QG
Sbjct: 313 LFSGRIKQG 321


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 1 LFSGLLDQG 9
LFSG + QG
Sbjct: 313 LFSGRIKQG 321


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LFSGLLDQG 9
LFSG + QG
Sbjct: 313 LFSGRIKQG 321


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LFSGLLDQG 9
LFSG + QG
Sbjct: 313 LFSGRIKQG 321


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 1 LFSGLLDQGS 10
+ +G+LD+GS
Sbjct: 288 VLNGVLDEGS 297


>sp|MDH_THETK|MALATE dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 2 FSGLLDQG 9
FSG+LD G
Sbjct: 141 FSGVLDGG 148


>sp|PORC_METTH|PYRUVATE synthase subunit PorC|Methanothermobacter thermautotrophicus

Query: 1 LFSGLLDQG 9
+FSGL D G
Sbjct: 83 VFSGLKDDG 91


>sp|COFD_HALSA|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LFSGLLDQG 9
L +GLLD+G
Sbjct: 131 LRAGLLDEG 139


>sp|COFD_HALS3|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LFSGLLDQG 9
L +GLLD+G
Sbjct: 131 LRAGLLDEG 139




120|SequenceR|605|596|ASSTNLFSGL

>sp|GUAAA_METS3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanobrevibacter

Query: 5 NLFSGL 10
NLFSGL
Sbjct: 110 NLFSGL 115




121|SequenceR|610|601|FPDSSASSTN

>sp|DADD_METS3|5'-DEOXYADENOSINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 PDSSASSTN 10
PDSSA+S+N
Sbjct: 377 PDSSATSSN 385




122|SequenceR|615|606|RTPQLFPDSS

>sp|ARGC_ARCFU|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RTPQLFP 7
RTP LFP
Sbjct: 326 RTPPLFP 332


Query: 2 TPQLFPDS 9
TPQ++P S
Sbjct: 223 TPQVYPGS 230


>sp|RL18_PYRFU|LARGE ribosomal subunit protein uL18|Pyrococcus furiosus (strain ATCC

Query: 2 TPQLFPD 8
+P++FPD
Sbjct: 134 SPEIFPD 140


>sp|MOAC_PYRHO|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrococcus horikoshii

Query: 1 RTPQLFP 7
RTP+L P
Sbjct: 68 RTPELIP 74


>sp|IMDH_THEAC|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 TPQLFPDSS 10
T Q FPD+S
Sbjct: 203 TRQKFPDAS 211




123|SequenceR|620|611|TPSPSRTPQL

>sp|DNAK_NATPD|CHAPERONE protein DnaK|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PSPSRTPQL 10
P+P+ TPQ+
Sbjct: 438 PAPAGTPQI 446


>sp|DNAK_HALMT|CHAPERONE protein DnaK|Haloferax mediterranei (strain ATCC 33500

Query: 2 PSPSRTPQL 10
P+P+ TPQ+
Sbjct: 438 PAPAGTPQI 446


>sp|DNAK_HALWD|CHAPERONE protein DnaK|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PSPSRTPQL 10
P+P+ TPQ+
Sbjct: 438 PAPAGTPQI 446


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 2 PSPSRTPQL 10
P+P+ TPQ+
Sbjct: 437 PAPAGTPQI 445


>sp|DNAK_HALSA|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 700922

Query: 2 PSPSRTPQL 10
P+P+ TPQ+
Sbjct: 437 PAPAGTPQI 445


>sp|DNAK_HALS3|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 29341

Query: 2 PSPSRTPQL 10
P+P+ TPQ+
Sbjct: 437 PAPAGTPQI 445


>sp|DNAK_HALLT|CHAPERONE protein DnaK|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PSPSRTPQL 10
P+P+ TPQ+
Sbjct: 438 PAPAGTPQI 446


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 1 TPSPSRTP 8
TPSP R P
Sbjct: 53 TPSPLRIP 60


>sp|PYCA_METTH|PYRUVATE carboxylase subunit A|Methanothermobacter thermautotrophicus

Query: 2 PSPSRTPQL 10
PSP TP+L
Sbjct: 243 PSPIMTPEL 251


>sp|ASSY_METBF|ARGININOSUCCINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TPSPSRTPQ 9
T SP +TP+
Sbjct: 202 TTSPEKTPE 210


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 2 PSPSRTPQL 10
P PSRT QL
Sbjct: 140 PLPSRTIQL 148


>sp|NADB_HALSA|L-ASPARTATE oxidase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PSPSRTPQL 10
P+PS P+L
Sbjct: 396 PAPSEPPEL 404


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM 14266

Query: 2 PSPSRTPQL 10
P P RTP +
Sbjct: 130 PKPVRTPPI 138


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PSPSRTPQL 10
P P + PQL
Sbjct: 598 PEPQQKPQL 606


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PSPSRTPQL 10
P P RTP +
Sbjct: 130 PKPVRTPPI 138




124|SequenceR|625|616|SSAHVTPSPS

>sp|ADEC_META3|ADENINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 SAHVTPS 8
S+H+TPS
Sbjct: 92 SSHITPS 98


>sp|COBD_META3|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus aeolicus (strain

Query: 3 AHVTPSPS 10
H TPSP+
Sbjct: 242 GHKTPSPN 249


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 2 SAHVTPSP 9
S H+TP P
Sbjct: 735 SKHMTPEP 742




125|SequenceR|630|621|NVAPTSSAHV

>sp|FDHD_METTH|SULFUR carrier protein FdhD|Methanothermobacter thermautotrophicus (strain

Query: 1 NVAPTSSAH 9
N APTSS +
Sbjct: 211 NAAPTSSGY 219


>sp|CIMA_METKA|PUTATIVE (R)-citramalate synthase CimA|Methanopyrus kandleri (strain AV19 /

Query: 2 VAPTSSAHV 10
V PTS HV
Sbjct: 104 VVPTSEVHV 112


>sp|KPRS_HALSA|RIBOSE-PHOSPHATE pyrophosphokinase|Halobacterium salinarum (strain ATCC 700922

Query: 4 PTSSAHV 10
PTS AH+
Sbjct: 56 PTSDAHI 62


>sp|KPRS_HALS3|RIBOSE-PHOSPHATE pyrophosphokinase|Halobacterium salinarum (strain ATCC 29341

Query: 4 PTSSAHV 10
PTS AH+
Sbjct: 56 PTSDAHI 62




126|SequenceR|635|626|VDPQINVAPT

>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VDPQINVA 8
+DP+IN+A
Sbjct: 136 LDPEINIA 143


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 DPQINVAPT 10
DP+ V PT
Sbjct: 407 DPETKVCPT 415


>sp|Y504_ARCFU|UPF0282 protein AF_0504|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VDPQINVAP 9
+DP +++AP
Sbjct: 29 IDPGVSLAP 37


>sp|COME_METMP|SULFOPYRUVATE decarboxylase subunit beta|Methanococcus maripaludis (strain DSM

Query: 3 PQINVAPT 10
P IN+ PT
Sbjct: 166 PNINLVPT 173


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 1 VDPQINVA 8
VDP+ NVA
Sbjct: 247 VDPERNVA 254


>sp|CCA_PYRIL|CCA-ADDING enzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VDPQINVA 8
VDP+ NVA
Sbjct: 230 VDPERNVA 237


>sp|Y2198_SACI3|UPF0282 protein M1627_2198|Saccharolobus islandicus (strain M.16.27)

Query: 1 VDPQINVAP 9
VDP I++AP
Sbjct: 29 VDPAISLAP 37


>sp|Y2116_SACI4|UPF0282 protein M1425_2116|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VDPQINVAP 9
VDP I++AP
Sbjct: 29 VDPAISLAP 37


>sp|Y671_SACI1|UPF0282 protein YN1551_0671|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VDPQINVAP 9
VDP I++AP
Sbjct: 29 VDPAISLAP 37


>sp|Y2281_SACI2|UPF0282 protein LS215_2281|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VDPQINVAP 9
VDP I++AP
Sbjct: 29 VDPAISLAP 37


>sp|Y2245_SACI7|UPF0282 protein YG5714_2245|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VDPQINVAP 9
VDP I++AP
Sbjct: 29 VDPAISLAP 37


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VDPQINVAPT 10
++P INV P+
Sbjct: 344 IEPPINVLPS 353


>sp|Y2122_SACI6|UPF0282 protein M164_2122|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VDPQINVAP 9
VDP I++AP
Sbjct: 29 VDPAISLAP 37


>sp|NNRD_NITMS|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Nitrosopumilus maritimus (strain

Query: 3 PQINVAPT 10
P+INVA T
Sbjct: 63 PKINVAST 70


>sp|Y3251_SACS2|UPF0282 protein SSO3251|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VDPQINVAP 9
VDP +++AP
Sbjct: 29 VDPAVSLAP 37




127|SequenceR|640|631|DWGGSVDPQI

>sp|KTHY_PYRAE|PROBABLE thymidylate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GGSVDPQI 10
GGSVDP +
Sbjct: 50 GGSVDPHV 57


>sp|FTSZ1_ARCFU|CELL division protein FtsZ 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WGGSVDPQI 10
WG +DP++
Sbjct: 324 WGAMIDPEL 332


>sp|EF1A_METM6|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C6 /

Query: 3 GGSVDPQI 10
GG++DPQ+
Sbjct: 31 GGAIDPQL 38


>sp|EF1A_METVS|ELONGATION factor 1-alpha|Methanococcus vannielii (strain ATCC 35089

Query: 3 GGSVDPQI 10
GG++DPQ+
Sbjct: 31 GGAIDPQL 38


>sp|EF1A_METM7|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C7 /

Query: 3 GGSVDPQI 10
GG++DPQ+
Sbjct: 31 GGAIDPQL 38


>sp|EF1A_METM5|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C5 /

Query: 3 GGSVDPQI 10
GG++DPQ+
Sbjct: 31 GGAIDPQL 38


>sp|EF1A_METVA|ELONGATION factor 1-alpha|Methanococcus vannielii

Query: 3 GGSVDPQI 10
GG++DPQ+
Sbjct: 31 GGAIDPQL 38


>sp|EF1A_METMP|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain DSM 14266

Query: 3 GGSVDPQI 10
GG++DPQ+
Sbjct: 31 GGAIDPQL 38


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 GGSVDPQI 10
GGSVDP I
Sbjct: 404 GGSVDPAI 411


>sp|FTSZ2_PYRFU|CELL division protein FtsZ 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WGGSVDPQI 10
WG VDP++
Sbjct: 323 WGAMVDPEM 331


>sp|FTSZ2_METJA|CELL division protein FtsZ 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 WGGSVDPQI 10
WG +DP++
Sbjct: 321 WGARIDPEM 329


>sp|FTSZ1_HALSA|CELL division protein FtsZ 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 WGGSVDPQI 10
WG S+D QI
Sbjct: 333 WGTSIDEQI 341


>sp|FTSZ1_HALS3|CELL division protein FtsZ 1|Halobacterium salinarum (strain ATCC 29341

Query: 2 WGGSVDPQI 10
WG S+D QI
Sbjct: 333 WGTSIDEQI 341


>sp|COXX_AERPE|PROTOHEME IX farnesyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GGSVDPQI 10
GGS+DP++
Sbjct: 43 GGSLDPRM 50


>sp|GCSPA_METS5|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Metallosphaera

Query: 1 DWGGSV 6
DWGGS+
Sbjct: 138 DWGGSL 143


>sp|TRUB_META3|PROBABLE tRNA pseudouridine synthase B|Methanococcus aeolicus (strain ATCC

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 62 GGTLDPKV 69


>sp|Y008_METJA|UNCHARACTERIZED protein MJ0008|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DWGGSVDPQI 10
DWG +P+I
Sbjct: 25 DWGLHYNPKI 34


>sp|TRUB_METM7|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 62 GGTLDPKV 69


>sp|TRUB_METM5|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 62 GGTLDPKV 69


>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 77 GGTLDPKV 84


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 88 GGTLDPKV 95


>sp|SYFA_METHJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 WGGSVDPQ 9
WGG DP+
Sbjct: 299 WGGKWDPE 306


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 79 GGTLDPKV 86


>sp|TRUB_METMP|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 62 GGTLDPKV 69


>sp|TRUB_METM6|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 62 GGTLDPKV 69


>sp|TRUB_NANEQ|PROBABLE tRNA pseudouridine synthase B|Nanoarchaeum equitans (strain

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 89 GGTLDPKV 96


>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 WGGSVDP 8
WGG+V P
Sbjct: 187 WGGNVVP 193


>sp|DPHB_PYRIL|DIPHTHINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 WGGSV 6
WGGSV
Sbjct: 207 WGGSV 211


>sp|CSD_METTH|PROBABLE cysteine desulfurase|Methanothermobacter thermautotrophicus (strain

Query: 1 DWGGSVDP 8
D GG VDP
Sbjct: 137 DEGGVVDP 144


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 WGGSVDP 8
WGG+V P
Sbjct: 187 WGGNVVP 193


>sp|YPV8_METTF|UNCHARACTERIZED protein ORF8|Methanothermobacter thermautotrophicus

Query: 2 WGGSVD--PQI 10
WGG+V+ PQ+
Sbjct: 298 WGGAVEDVPQV 308


>sp|TRUB_THEON|PROBABLE tRNA pseudouridine synthase B|Thermococcus onnurineus (strain

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 78 GGTLDPKV 85


>sp|TRUB_THEGJ|PROBABLE tRNA pseudouridine synthase B|Thermococcus gammatolerans (strain

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 78 GGTLDPKV 85


>sp|TRUB_PYRHO|PROBABLE tRNA pseudouridine synthase B|Pyrococcus horikoshii (strain ATCC

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 78 GGTLDPKV 85


>sp|TRUB_PYRFU|PROBABLE tRNA pseudouridine synthase B|Pyrococcus furiosus (strain ATCC

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 78 GGTLDPKV 85


>sp|TRUB_THEKO|PROBABLE tRNA pseudouridine synthase B|Thermococcus kodakarensis (strain

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 78 GGTLDPKV 85


>sp|TRUB_PYRAB|PROBABLE tRNA pseudouridine synthase B|Pyrococcus abyssi (strain GE5 /

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 78 GGTLDPKV 85


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 68 GGTLDPKV 75


>sp|TRUB_METKA|PROBABLE tRNA pseudouridine synthase B|Methanopyrus kandleri (strain AV19

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 76 GGTLDPKV 83


>sp|GGGPS_KORCO|GERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 WGGSVDP 8
W GSV+P
Sbjct: 138 WVGSVNP 144


>sp|TRUB_HALMA|PROBABLE tRNA pseudouridine synthase B|Haloarcula marismortui (strain ATCC

Query: 3 GGSVDPQI 10
GG++DP++
Sbjct: 68 GGTLDPKV 75


>sp|TRM56_HYPBU|TRNA (cytidine(56)-2'-O)-methyltransferase|Hyperthermus butylicus

Query: 2 WGGSVD 7
WGGS++
Sbjct: 65 WGGSME 70


>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 WGGSVD 7
W GSVD
Sbjct: 256 WDGSVD 261


>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 WGGSVD 7
WGG+VD
Sbjct: 231 WGGAVD 236


>sp|YPZ8_METTF|UNCHARACTERIZED protein ORF8'|Methanothermobacter thermautotrophicus

Query: 2 WGGSVD--PQI 10
WGG+V+ PQ+
Sbjct: 298 WGGAVEDVPQV 308


>sp|FTSZ1_HALVD|CELL division protein FtsZ 1|Haloferax volcanii (strain ATCC 29605

Query: 2 WGGSVDPQI 10
WG SVD ++
Sbjct: 331 WGTSVDDEL 339


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 2 WGGSVDPQ 9
W +VDP+
Sbjct: 446 WASNVDPE 453


>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 2 WGGSVDPQI 10
WGG P++
Sbjct: 298 WGGEWSPEV 306




128|SequenceR|645|636|PKAHWDWGGS

>sp|GCSPA_METS5|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Metallosphaera

Query: 3 AHWDWGGS 10
+H+DWGGS
Sbjct: 135 SHYDWGGS 142


>sp|Y663_METTH|PUTATIVE ammonium transporter MTH_663|Methanothermobacter thermautotrophicus

Query: 1 PKAHWDWGG 9
P AHW WGG
Sbjct: 151 PVAHWVWGG 159


>sp|Y661_METTH|PUTATIVE ammonium transporter MTH_661|Methanothermobacter thermautotrophicus

Query: 1 PKAHWDWGG 9
P AHW WGG
Sbjct: 143 PVAHWVWGG 151


>sp|AMT3_ARCFU|AMMONIUM transporter Amt3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PKAHWDWGG 9
P AHW WGG
Sbjct: 131 PIAHWVWGG 139


>sp|AMT1_ARCFU|AMMONIUM transporter Amt1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PKAHWDWGG 9
P AHW WGG
Sbjct: 131 PFAHWLWGG 139


>sp|SYS_METMA|SERINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PKAHWDWGGS 10
PK HW+ G S
Sbjct: 137 PKPHWEIGES 146


>sp|IDI2_PICTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Picrophilus torridus (strain ATCC 700027

Query: 2 KAHWDWG 8
KA W+WG
Sbjct: 242 KAFWNWG 248


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PKAHWDWG 8
PK HW+ G
Sbjct: 137 PKPHWEIG 144


>sp|SYS_METAC|SERINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PKAHWDWG 8
PK HW+ G
Sbjct: 137 PKPHWEIG 144


>sp|AGLB2_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 AHWDWG 8
A WDWG
Sbjct: 487 AWWDWG 492


>sp|IDI2_ARCFU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 WDWG 8
WDWG
Sbjct: 241 WDWG 244


>sp|IDI2_THEON|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus onnurineus (strain NA1)

Query: 5 WDWG 8
WDWG
Sbjct: 256 WDWG 259


>sp|IDI2_THEKO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 WDWG 8
WDWG
Sbjct: 256 WDWG 259


>sp|IDI2_PYRHO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 WDWG 8
WDWG
Sbjct: 252 WDWG 255


>sp|TRUA_PYRAE|TRNA pseudouridine synthase A|Pyrobaculum aerophilum (strain ATCC

Query: 1 PKAHWDWG 8
PK W WG
Sbjct: 69 PKGAWAWG 76


>sp|MTNA_ARCFU|PUTATIVE methylthioribose-1-phosphate isomerase|Archaeoglobus fulgidus

Query: 1 PKAHWDW 7
PKA +DW
Sbjct: 264 PKATFDW 270


>sp|IDI2_THESM|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus sibiricus (strain DSM 12597

Query: 5 WDWG 8
WDWG
Sbjct: 256 WDWG 259


>sp|IDI2_METTH|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 WDWG 8
WDWG
Sbjct: 233 WDWG 236


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 5 WDWG 8
WDWG
Sbjct: 475 WDWG 478


>sp|IDI2_PYRAB|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus abyssi (strain GE5 /

Query: 5 WDWG 8
WDWG
Sbjct: 251 WDWG 254


>sp|Y417_ARCFU|UNCHARACTERIZED protein AF_0417|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KAHWDWG 8
KA W WG
Sbjct: 123 KAGWGWG 129


>sp|IDI2_PYRFU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 WDWG 8
WDWG
Sbjct: 253 WDWG 256


>sp|ENGB_NATPD|PROBABLE GTP-binding protein EngB|Natronomonas pharaonis (strain ATCC

Query: 4 HWDWGG 9
H+DW G
Sbjct: 49 HYDWAG 54


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 WDWGG 9
W WGG
Sbjct: 203 WPWGG 207


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WDWGGS 10
WDW G+
Sbjct: 2508 WDWIGT 2513


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KAHWDWGG 9
K H DWG
Sbjct: 217 KIHEDWGA 224


>sp|HYD1B_PYRFU|SULFHYDROGENASE 1 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KAHWDWG 8
K H DWG
Sbjct: 205 KYHEDWG 211


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PKAHWD 6
PKA WD
Sbjct: 391 PKAVWD 396


>sp|MPNS_NITMS|METHYLPHOSPHONATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PKAHWDWG 8
PKA W+ G
Sbjct: 140 PKAQWNNG 147


>sp|MTSA_METMA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PKAHWD 6
PKAH+D
Sbjct: 45 PKAHFD 50


>sp|AMT2_ARCFU|AMMONIUM transporter Amt2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AHWDWGG 9
HW WGG
Sbjct: 167 GHWLWGG 173


>sp|MTSA_METBA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina barkeri

Query: 1 PKAHWD 6
PKAH+D
Sbjct: 45 PKAHFD 50


>sp|ILVE_METTH|PUTATIVE branched-chain-amino-acid aminotransferase|Methanothermobacter

Query: 3 AHWDWGG 9
A W+WG
Sbjct: 122 AAWEWGA 128


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 2 KAHWDWGGS 10
K H DWG +
Sbjct: 217 KLHEDWGST 225


>sp|SRP19_ARCFU|SIGNAL recognition particle 19 kDa|Archaeoglobus fulgidus (strain ATCC

Query: 1 PKAHWDWGG 9
PK+ W+ GG
Sbjct: 56 PKSWWEEGG 64


>sp|RL15_METST|LARGE ribosomal subunit protein uL15|Methanosphaera stadtmanae (strain

Query: 2 KAHWDW 7
K HW W
Sbjct: 41 KHHWTW 46


>sp|RL15_METTH|LARGE ribosomal subunit protein uL15|Methanothermobacter

Query: 2 KAHWDW 7
K HW W
Sbjct: 41 KHHWTW 46


>sp|RL4_NANEQ|LARGE ribosomal subunit protein uL4|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PKAHWDW 7
PKA DW
Sbjct: 109 PKAEKDW 115


>sp|RL3_ARCFU|LARGE ribosomal subunit protein uL3|Archaeoglobus fulgidus (strain ATCC

Query: 1 PKAHWD 6
PKAH+D
Sbjct: 311 PKAHFD 316


>sp|SURE2_PYRAE|5'-NUCLEOTIDASE SurE 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KAHWDWG 8
K +W WG
Sbjct: 191 KYYWRWG 197


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 2 KAHWDWGGS 10
K H DWG +
Sbjct: 219 KLHEDWGST 227


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 2 KAHWDWGGS 10
K H DWG +
Sbjct: 219 KLHEDWGST 227


>sp|Y3407_METJA|UNCHARACTERIZED protein MJECS07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HWDW 7
+WDW
Sbjct: 112 YWDW 115


>sp|SURE_CALMQ|5'-NUCLEOTIDASE SurE|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 KAHWDWG 8
K +W WG
Sbjct: 212 KIYWRWG 218




129|SequenceR|650|641|MGFGGPKAHW

>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 MGFGGPKA 8
M FGGP+A
Sbjct: 272 MNFGGPRA 279


>sp|GCSPA_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 MGFGGPKA 8
M FGGP+A
Sbjct: 269 MNFGGPRA 276


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 MGFGGPKA 8
M FGGP+A
Sbjct: 272 MNFGGPRA 279


>sp|GCSPA_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 1 MGFGGPKA 8
M FGGP+A
Sbjct: 271 MNFGGPRA 278


>sp|GCSPA_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 MGFGGPKA 8
M FGGP+A
Sbjct: 269 MNFGGPRA 276


>sp|GCSPA_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 MGFGGPKA 8
M FGGP+A
Sbjct: 271 MNFGGPRA 278


>sp|PUR2_METTH|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 MGFGGPKAH 9
M F GP+AH
Sbjct: 64 MAFIGPEAH 72


>sp|RAD50_METAC|DNA double-strand break repair Rad50|Methanosarcina acetivorans (strain

Query: 1 MGFGGPKA 8
+GFGG KA
Sbjct: 996 LGFGGDKA 1003


>sp|DTDA_SULAC|D-AMINOACYL-TRNA deacylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 MGFGGP 6
+GFGGP
Sbjct: 159 VGFGGP 164


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 1 MGFGGPKA 8
MGFG P A
Sbjct: 430 MGFGFPSA 437


>sp|RL32_ARCFU|LARGE ribosomal subunit protein eL32|Archaeoglobus fulgidus (strain

Query: 1 MGFGGPKA 8
+GFG PKA
Sbjct: 62 VGFGSPKA 69


>sp|COMC_METJA|L-SULFOLACTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FGGPKAH 9
FGGPK +
Sbjct: 221 FGGPKGY 227


>sp|DTDA_SACS2|D-AMINOACYL-TRNA deacylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GFGGP 6
GFGGP
Sbjct: 160 GFGGP 164


>sp|DTDA_SACI7|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 GFGGP 6
GFGGP
Sbjct: 160 GFGGP 164


>sp|DTDA_SACI6|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GFGGP 6
GFGGP
Sbjct: 160 GFGGP 164


>sp|DTDA_SACI4|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GFGGP 6
GFGGP
Sbjct: 160 GFGGP 164


>sp|DTDA_SACI3|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 GFGGP 6
GFGGP
Sbjct: 160 GFGGP 164


>sp|DTDA_SACI2|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GFGGP 6
GFGGP
Sbjct: 160 GFGGP 164


>sp|DTDA_SACI1|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 GFGGP 6
GFGGP
Sbjct: 160 GFGGP 164


>sp|Y1830_SULTO|UPF0273 protein STK_18300|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GFGGP 6
GFGGP
Sbjct: 180 GFGGP 184


>sp|MOBDP_HALVD|PROBABLE molybdenum ABC transporter permease|Haloferax volcanii (strain

Query: 1 MGFGGPKAHW 10
+ FG P A+W
Sbjct: 80 VAFGVPLAYW 89


>sp|Y1359_METJA|UPF0273 protein MJ1359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GFGGP 6
GFGGP
Sbjct: 178 GFGGP 182


>sp|GCSPA_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 MGFGGP 6
M FGGP
Sbjct: 259 MNFGGP 264


>sp|GCSPA_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 MGFGGP 6
M FGGP
Sbjct: 259 MNFGGP 264


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 5 GPKAHW 10
GPKA W
Sbjct: 506 GPKAGW 511


>sp|THII_METS3|PROBABLE tRNA sulfurtransferase|Methanobrevibacter smithii (strain ATCC

Query: 3 FGGPKAH 9
F GPK H
Sbjct: 212 FTGPKVH 218


>sp|Y1861_SACS2|UPF0273 protein SSO1861|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GFGGP 6
GFGGP
Sbjct: 177 GFGGP 181


>sp|Y1505_AERPE|UPF0273 protein APE_1505.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 GFGGP 6
GFGGP
Sbjct: 178 GFGGP 182


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 GPKAHW 10
GPKA W
Sbjct: 506 GPKAGW 511


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 GPKAHW 10
GPKA W
Sbjct: 506 GPKAGW 511


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 GPKAHW 10
GPKA W
Sbjct: 502 GPKAGW 507


>sp|Y3143_PYRAE|UPF0273 protein PAE3143|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GFGGP 6
GFGGP
Sbjct: 179 GFGGP 183


>sp|F16PA_HALWD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GFGGPKAHW 10
GFGG +W
Sbjct: 190 GFGGRVPNW 198


>sp|F16PA_NATPD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GFGGPKAHW 10
GFGG +W
Sbjct: 168 GFGGRVPNW 176


>sp|Y258_PYRAB|UPF0273 protein PYRAB02580|Pyrococcus abyssi (strain GE5 /

Query: 2 GFGGP 6
GFGGP
Sbjct: 178 GFGGP 182


>sp|Y1931_PYRFU|UPF0273 protein PF1931|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GFGGP 6
GFGGP
Sbjct: 178 GFGGP 182


>sp|Y1590_THEKO|UPF0273 protein TK1590|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GFGGP 6
GFGGP
Sbjct: 178 GFGGP 182


>sp|Y284_PYRHO|UPF0273 protein PH0284|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GFGGP 6
GFGGP
Sbjct: 178 GFGGP 182


>sp|Y039_METKA|UPF0273 protein MK0039|Methanopyrus kandleri (strain AV19 /

Query: 2 GFGGP 6
GFGGP
Sbjct: 179 GFGGP 183


>sp|RL3_METTH|LARGE ribosomal subunit protein uL3|Methanothermobacter

Query: 2 GFGGPKAHW 10
GF GP W
Sbjct: 206 GFQGPVKRW 214


>sp|RL3_ARCFU|LARGE ribosomal subunit protein uL3|Archaeoglobus fulgidus (strain ATCC

Query: 2 GFGGPKAHW 10
GF GP W
Sbjct: 202 GFQGPVKRW 210


>sp|SYW_ARCFU|TRYPTOPHAN--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FGGPK 7
FGGPK
Sbjct: 197 FGGPK 201


>sp|RL3_META3|LARGE ribosomal subunit protein uL3|Methanococcus aeolicus (strain ATCC

Query: 2 GFGGPKAHW 10
GF GP W
Sbjct: 204 GFQGPVKRW 212


>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 3 FGGPKAHW 10
GGP +W
Sbjct: 541 LGGPDVYW 548


>sp|RS12_METKA|SMALL ribosomal subunit protein uS12|Methanopyrus kandleri (strain AV19 /

Query: 2 GFGGPKA 8
G GGPK
Sbjct: 107 GIGGPKG 113


>sp|RL3_METVS|LARGE ribosomal subunit protein uL3|Methanococcus vannielii (strain ATCC

Query: 2 GFGGPKAHW 10
GF GP W
Sbjct: 205 GFQGPVKRW 213


>sp|RL3_METVA|LARGE ribosomal subunit protein uL3|Methanococcus vannielii

Query: 2 GFGGPKAHW 10
GF GP W
Sbjct: 205 GFQGPVKRW 213


>sp|CBIM_HALS3|PUTATIVE cobalt transport protein CbiM|Halobacterium salinarum (strain ATCC

Query: 1 MGFGGPKAHW 10
MG GP A W
Sbjct: 115 MGVVGPVAGW 124




130|SequenceR|655|646|ASKSGMGFGG

>sp|CAS6L_PYRHO|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6nc|Pyrococcus

Query: 1 ASKSGMGFG 9
K+G+GFG
Sbjct: 225 GEKTGLGFG 233


>sp|DTDA_PICTO|D-AMINOACYL-TRNA deacylase|Picrophilus torridus (strain ATCC 700027

Query: 3 KSGMGFGG 10
+SG+G GG
Sbjct: 171 RSGIGIGG 178


>sp|DTDA_METBU|D-AMINOACYL-TRNA deacylase|Methanococcoides burtonii (strain DSM 6242

Query: 5 GMGFGG 10
G+GFGG
Sbjct: 202 GIGFGG 207


>sp|GAL1_PYRFU|GALACTOKINASE furiosus (strain ATCC 43587

Query: 1 ASKSGMGFGG 10
A +G GFGG
Sbjct: 300 ARLTGAGFGG 309


>sp|GAL1_THEKO|GALACTOKINASE kodakarensis (strain ATCC BAA-918

Query: 1 ASKSGMGFGG 10
A +G GFGG
Sbjct: 297 ARLTGAGFGG 306


>sp|GAL1_PYRHO|GALACTOKINASE horikoshii (strain ATCC 700860

Query: 1 ASKSGMGFGG 10
A +G GFGG
Sbjct: 298 ARLTGAGFGG 307


>sp|GPMI_NATPD|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ASKSGMGF 8
A KSG+GF
Sbjct: 152 APKSGVGF 159




131|SequenceR|660|651|TPSTAASKSG

>sp|CAS5C_SACS2|CRISPR-ASSOCIATED protein Cas5 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PSTAASKSG 10
PS A +KSG
Sbjct: 19 PSAAKAKSG 27




132|SequenceR|665|656|GHSSGTPSTA

>sp|Y179_ARCFU|UNCHARACTERIZED protein AF_0179|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HSSGTPSTA 10
HSS TP+TA
Sbjct: 142 HSSSTPNTA 150


>sp|BIOW_METVS|6-CARBOXYHEXANOATE--COA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 HSSGTPST 9
H +GTP T
Sbjct: 41 HENGTPDT 48


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 HSSGTPSTA 10
H SGTP A
Sbjct: 88 HQSGTPILA 96


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 HSSGTPSTA 10
H SGTP A
Sbjct: 88 HQSGTPILA 96


>sp|AROC_PYRAR|CHORISMATE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GHSSGTP 7
GH+ GTP
Sbjct: 72 GHTQGTP 78


>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GHSSGTPSTA 10
GH G+P A
Sbjct: 1130 GHFDGSPEAA 1139


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GHSSGTP 7
GH+ GTP
Sbjct: 72 GHTQGTP 78


>sp|COFH_METPE|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanosphaerula palustris (strain ATCC

Query: 1 GHSSGTPSTA 10
HS G P+TA
Sbjct: 209 AHSLGIPTTA 218




133|SequenceR|670|661|QHTPTGHSSG

>sp|RL32_METVS|LARGE ribosomal subunit protein eL32|Methanococcus vannielii (strain

Query: 4 PTGHSSG 10
PTGH SG
Sbjct: 39 PTGHHSG 45


>sp|RL32_METVA|LARGE ribosomal subunit protein eL32|Methanococcus vannielii

Query: 4 PTGHSSG 10
PTGH SG
Sbjct: 39 PTGHHSG 45


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus (strain

Query: 1 QHTPTGH 7
+ TPTGH
Sbjct: 168 EETPTGH 174


>sp|Y206_METJA|UNCHARACTERIZED protein MJ0206|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TPTGH 7
TPTGH
Sbjct: 30 TPTGH 34


>sp|HYD1B_PYRFU|SULFHYDROGENASE 1 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TPTGH 7
TPTGH
Sbjct: 168 TPTGH 172


>sp|NUCS2_HALSA|ENDONUCLEASE NucS 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 HTPTGH 7
H PTGH
Sbjct: 64 HQPTGH 69


>sp|GUAAA_METST|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosphaera

Query: 1 QHTPTG 6
QHTP G
Sbjct: 167 QHTPRG 172


>sp|HTR8_HALS3|TRANSDUCER protein Htr8|Halobacterium salinarum (strain ATCC 29341

Query: 1 QHTPTGHS 8
++TPTG S
Sbjct: 26 EYTPTGES 33


>sp|R1PKT_HALXS|ATP-DEPENDENT ribose-1-phosphate kinase|Halopiger xanaduensis (strain DSM 18323

Query: 2 HTPTG 6
HTPTG
Sbjct: 219 HTPTG 223


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 5 TGHSSG 10
TGHS+G
Sbjct: 1699 TGHSNG 1704


>sp|GVPK1_HALSA|GAS vesicle protein K1|Halobacterium salinarum (strain ATCC 700922

Query: 1 QHTPTGHSS 9
TP+GH S
Sbjct: 97 HETPSGHGS 105




134|SequenceR|675|666|TQPKSQHTPT

>sp|GUAAA_METST|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosphaera

Query: 2 QPKSQHTP 9
P+ QHTP
Sbjct: 163 HPEVQHTP 170


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 TQPKSQHTP 9
T P +QH+P
Sbjct: 336 THPSTQHSP 344




135|SequenceR|680|671|AFPDLTQPKS

>sp|ILVC_PYRFU|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PDLTQPK 9
PDL QPK
Sbjct: 85 PDLVQPK 91


>sp|ILVC_PYRAB|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 3 PDLTQPK 9
PDL QPK
Sbjct: 85 PDLVQPK 91


>sp|ILVC_CALMQ|KETOL-ACID reductoisomerase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 2 FPDLTQPK 9
PD+ QPK
Sbjct: 80 LPDMVQPK 87


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 FPDLTQPKS 10
FP+LT P++
Sbjct: 268 FPELTDPRT 276


>sp|ILVC_PYRNV|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum neutrophilum (strain DSM

Query: 3 PDLTQPK 9
PD+ QPK
Sbjct: 82 PDMEQPK 88


>sp|ILVC_PYRIL|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum islandicum (strain DSM

Query: 3 PDLTQPK 9
PD+ QPK
Sbjct: 82 PDMEQPK 88


>sp|ILVC_PYRAR|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum arsenaticum (strain DSM

Query: 3 PDLTQPK 9
PD+ QPK
Sbjct: 82 PDMEQPK 88


>sp|ILVC_PYRAE|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum aerophilum (strain ATCC

Query: 3 PDLTQPK 9
PD+ QPK
Sbjct: 82 PDMEQPK 88


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 2 FPDLTQPKS 10
FP LT PK+
Sbjct: 270 FPHLTDPKT 278


>sp|GATE_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus vannielii (strain ATCC

Query: 3 PDLTQPK 9
PD+T PK
Sbjct: 191 PDITSPK 197


>sp|GATB_SULTO|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfurisphaera tokodaii (strain DSM

Query: 3 PDLTQPK 9
PD+T+PK
Sbjct: 161 PDMTEPK 167


>sp|GATE_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C7 /

Query: 3 PDLTQPK 9
PD+T PK
Sbjct: 191 PDITSPK 197


>sp|GATE_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C6 /

Query: 3 PDLTQPK 9
PD+T PK
Sbjct: 191 PDITSPK 197


>sp|GATE_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain DSM

Query: 3 PDLTQPK 9
PD+T PK
Sbjct: 191 PDITSPK 197


>sp|GATE_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C5 /

Query: 3 PDLTQPK 9
PD+T PK
Sbjct: 191 PDITSPK 197


>sp|NADE_THEVO|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PDLTQPKS 10
PD T PKS
Sbjct: 56 PDATTPKS 63


>sp|RIFK_METKA|RIBOFLAVIN kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 FPDLTQ 7
FPDLT+
Sbjct: 93 FPDLTE 98


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AFPDLTQ 7
A+PDLT+
Sbjct: 368 AYPDLTE 374


>sp|ENDA_SULAC|TRNA-SPLICING endonuclease|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 DLTQPKS 10
D+T+PKS
Sbjct: 33 DITKPKS 39


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 FPDLTQPKS 10
FP+L PK+
Sbjct: 273 FPELEDPKT 281


>sp|AATA_METMJ|A-TYPE ATP synthase subunit A|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 FPDLTQPKS 10
FP+L PK+
Sbjct: 275 FPELEDPKT 283


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 2 FPDLTQPKS 10
FP+L PK+
Sbjct: 269 FPELEDPKT 277


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 FPDLTQPKS 10
FP+L PK+
Sbjct: 272 FPELEDPKT 280


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 2 FPDLTQPKS 10
FP L PKS
Sbjct: 276 FPVLVDPKS 284


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 2 FPDLTQPKS 10
FP+L PK+
Sbjct: 273 FPELQDPKT 281


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 FPDLTQPKS 10
FP+L PK+
Sbjct: 278 FPELEDPKT 286


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 2 FPDLTQPKS 10
FP+L PK+
Sbjct: 274 FPELEDPKT 282


>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 2 FPDLTQPKS 10
FP+L PK+
Sbjct: 279 FPELDDPKT 287




136|SequenceR|685|676|LTGLDAFPDL

>sp|PUR8_PYRHO|ADENYLOSUCCINATE lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LTGLDAFPD 9
LTGL+ FP+
Sbjct: 342 LTGLEFFPE 350


>sp|PDXS_PICTO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Picrophilus torridus (strain

Query: 1 LTGLDAFPDL 10
L G D FPD+
Sbjct: 213 LFGYDNFPDM 222


>sp|LIVF_ARCFU|PROBABLE branched-chain amino acid transport|Archaeoglobus fulgidus (strain

Query: 3 GLDAFPDL 10
LDAFP+L
Sbjct: 116 ALDAFPEL 123


>sp|PTR2_METJA|HTH-TYPE transcriptional regulator Ptr2|Methanocaldococcus jannaschii

Query: 1 LTGLDAFPD 9
LTG D PD
Sbjct: 66 LTGFDTEPD 74


>sp|ATGT_HALMA|TRNA-GUANINE(15) transglycosylase|Haloarcula marismortui (strain ATCC 43049

Query: 2 TGLDAFP 8
TGLD FP
Sbjct: 186 TGLDVFP 192


>sp|MOAA_SACI7|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LTGLDAF 7
+TG+DAF
Sbjct: 126 ITGVDAF 132


>sp|MOAA_SACI6|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LTGLDAF 7
+TG+DAF
Sbjct: 126 ITGVDAF 132


>sp|MOAA_SACI4|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LTGLDAF 7
+TG+DAF
Sbjct: 126 ITGVDAF 132


>sp|MOAA_SACI3|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.27)

Query: 1 LTGLDAF 7
+TG+DAF
Sbjct: 126 ITGVDAF 132


>sp|MOAA_SACI2|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LTGLDAF 7
+TG+DAF
Sbjct: 126 ITGVDAF 132


>sp|MOAA_SACI1|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LTGLDAF 7
+TG+DAF
Sbjct: 126 ITGVDAF 132


>sp|MOAA_SACS2|PROBABLE GTP 3',8-cyclase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LTGLDAF 7
+TG+DAF
Sbjct: 126 ITGVDAF 132


>sp|FAEHP_METBU|BIFUNCTIONAL enzyme Fae/Hps|Methanococcoides burtonii (strain DSM 6242

Query: 3 GLDAFPDL 10
LD FPD+
Sbjct: 140 ALDGFPDI 147




137|SequenceR|690|681|FSSSGLTGLD

>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei

Query: 1 FSSSGLTGL 9
FS+SG+ GL
Sbjct: 72 FSASGIRGL 80


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 1 FSSSGLTGL 9
FS+SG+ GL
Sbjct: 72 FSASGIRGL 80


>sp|TRM1_METAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina acetivorans

Query: 1 FSSSGLTGL 9
FS+SG+ GL
Sbjct: 72 FSASGIRGL 80


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SSSGLTGL 9
SSSG TG+
Sbjct: 290 SSSGFTGI 297


>sp|LYSZ_PYRFU|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrococcus furiosus

Query: 5 GLTGLD 10
GLTGLD
Sbjct: 97 GLTGLD 102


>sp|CYSC_ARCFU|PROBABLE adenylyl-sulfate kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GLTGLD 10
GLTGLD
Sbjct: 130 GLTGLD 135


>sp|GLYA_METPE|SERINE hydroxymethyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 FSSSGLTGLD 10
S+ GLTGL+
Sbjct: 318 LSNRGLTGLE 327


>sp|VORA_METTH|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter thermautotrophicus

Query: 5 GLTGLD 10
GLTGLD
Sbjct: 431 GLTGLD 436


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 4 SGLTGLD 10
+GLTG+D
Sbjct: 198 AGLTGID 204


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 4 SGLTGLD 10
+GLTG+D
Sbjct: 198 AGLTGID 204


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 4 SGLTGLD 10
+GLTG+D
Sbjct: 198 AGLTGID 204


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 SGLTGLD 10
+GLTG+D
Sbjct: 198 AGLTGID 204


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 SGLTGLD 10
+GLTG+D
Sbjct: 198 AGLTGID 204


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 SGLTGLD 10
+GLTG+D
Sbjct: 198 AGLTGID 204




138|SequenceR|695|686|TPKSAFSSSG

***** No hits found ******


139|SequenceR|700|691|LGTPTTPKSA

>sp|G1PDH_METLZ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocorpusculum labreanum (strain ATCC

Query: 1 LGTPTTPK 8
+G PTTPK
Sbjct: 307 IGAPTTPK 314


>sp|Y1620_METJA|UNCHARACTERIZED protein MJ1620|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGTPTTP 7
LG PTTP
Sbjct: 339 LGRPTTP 345


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 TPTTPKSA 10
TP TP+SA
Sbjct: 490 TPVTPRSA 497


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 TPTTPKSA 10
TP TP+SA
Sbjct: 492 TPVTPRSA 499


>sp|SYP_METMA|PROLINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LGTPTTPKS 9
LG P TP+S
Sbjct: 449 LGIPLTPRS 457


>sp|TF2B2_SACS2|TRANSCRIPTION initiation factor IIB 2|Saccharolobus solfataricus (strain ATCC

Query: 1 LGTPTTPK 8
+G+P+TPK
Sbjct: 55 VGSPSTPK 62


>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PTTPKS 9
PTTPKS
Sbjct: 34 PTTPKS 39


>sp|RUVB_METHJ|HOLLIDAY junction branch migration complex|Methanospirillum hungatei JF-1

Query: 1 LGTPTTPKSA 10
LG P TP+ A
Sbjct: 197 LGIPITPEGA 206


>sp|SEPS_METTP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LGTPTTPK 8
LG P TPK
Sbjct: 445 LGIPRTPK 452


>sp|RL30_PYRAE|LARGE ribosomal subunit protein uL30|Pyrobaculum aerophilum (strain

Query: 2 GTPTTPK 8
G PTTP+
Sbjct: 20 GIPTTPR 26


>sp|G1PDH_METHJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LGTPTTPK 8
+G PTTP+
Sbjct: 306 IGAPTTPR 313


>sp|FLAB2_THEKO|FLAGELLIN B2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LGTPTTPK 8
LG+ TTPK
Sbjct: 334 LGSETTPK 341


>sp|RL30_PYRNV|LARGE ribosomal subunit protein uL30|Pyrobaculum neutrophilum (strain

Query: 2 GTPTTPK 8
G PTTP+
Sbjct: 17 GIPTTPR 23


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 2 GTPTTPK 8
GTPT P+
Sbjct: 89 GTPTLPE 95


>sp|RL30_PYRAR|LARGE ribosomal subunit protein uL30|Pyrobaculum arsenaticum (strain

Query: 2 GTPTTPK 8
G PTTP+
Sbjct: 19 GIPTTPR 25


>sp|SURE_THEPD|5'-NUCLEOTIDASE SurE|Thermofilum pendens (strain DSM 2475

Query: 3 TPTTPKSA 10
P TPKSA
Sbjct: 33 VPETPKSA 40


>sp|G1PDH_METMJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoculleus marisnigri (strain ATCC

Query: 1 LGTPTTPKS 9
+G PTTP +
Sbjct: 307 IGAPTTPAA 315


>sp|RL30_PYRIL|LARGE ribosomal subunit protein uL30|Pyrobaculum islandicum (strain DSM

Query: 2 GTPTTPK 8
G PTTP+
Sbjct: 20 GIPTTPR 26


>sp|TRMY_PYRAB|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus abyssi

Query: 1 LGTPTTPKS 9
LG P PKS
Sbjct: 57 LGPPDPPKS 65




140|SequenceR|705|696|PFGGGLGTPT

>sp|DCDA_METTH|DIAMINOPIMELATE decarboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 FGGGLGTP 9
FGGGLG P
Sbjct: 236 FGGGLGIP 243


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PF-GGGLGTP 9
PF GGLGTP
Sbjct: 213 PFQSGGLGTP 222


>sp|TRPE_METJA|ANTHRANILATE synthase component 1|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PFGGGLG 7
P+GGG+G
Sbjct: 407 PYGGGVG 413


>sp|DCDA_METJA|DIAMINOPIMELATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FGGGLGTP 9
GGGLG P
Sbjct: 251 LGGGLGIP 258


>sp|CAPPA_PYRCJ|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PFGGGLGTP 9
PF GGL P
Sbjct: 231 PFRGGLNNP 239


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PFGGGLGTP 9
PF GGL P
Sbjct: 237 PFRGGLNNP 245


>sp|COXX_HYPBU|PROTOHEME IX farnesyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 3 GGGLGTP 9
GGGLG P
Sbjct: 36 GGGLGKP 42


>sp|COFD_METBU|2-PHOSPHO-L-LACTATE transferase|Methanococcoides burtonii (strain DSM 6242

Query: 2 FGGGLGTP 9
F GG GTP
Sbjct: 4 FSGGTGTP 11


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GGLGTP 9
GGLGTP
Sbjct: 686 GGLGTP 691


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 4 GGLGTP 9
GGLGTP
Sbjct: 555 GGLGTP 560


>sp|MTRH_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanopyrus kandleri (strain AV19 /

Query: 1 PFGGGLGT 8
PFG G GT
Sbjct: 202 PFGSGAGT 209


>sp|PRIS_PYRNV|DNA primase small subunit PriS|Pyrobaculum neutrophilum (strain DSM

Query: 1 PFGGGL 6
PFGGG+
Sbjct: 31 PFGGGM 36


>sp|PRIS_PYRAR|DNA primase small subunit PriS|Pyrobaculum arsenaticum (strain DSM

Query: 1 PFGGGL 6
PFGGG+
Sbjct: 31 PFGGGM 36


>sp|CAPPA_PYRIL|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PFGGGLGTPT 10
PF GG+ P+
Sbjct: 232 PFRGGINNPS 241


>sp|DPCKG_METBF|GTP-DEPENDENT dephospho-CoA kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FGGGLGTPT 10
F G LG+PT
Sbjct: 34 FAGELGSPT 42


>sp|LONB_METTH|ARCHAEAL Lon protease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 GGLGTP 9
GGLGTP
Sbjct: 220 GGLGTP 225


>sp|TRPE2_HALMA|ANTHRANILATE synthase component 1 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 PFGGGLG 7
P+GGG+G
Sbjct: 448 PYGGGVG 454


>sp|HIS4_PYRFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Pyrococcus furiosus (strain ATCC

Query: 2 FGGGLGTPT 10
+ GG+ TPT
Sbjct: 188 YAGGVATPT 196


>sp|COFD_METMA|2-PHOSPHO-L-LACTATE transferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FGGGLGTP 9
F GG GTP
Sbjct: 4 FSGGTGTP 11


>sp|COFD_METBF|2-PHOSPHO-L-LACTATE transferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FGGGLGTP 9
F GG GTP
Sbjct: 4 FSGGTGTP 11


>sp|DCDA_THEAC|DIAMINOPIMELATE decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GGGLGTP 9
GGGLG P
Sbjct: 231 GGGLGIP 237


>sp|PCP_THELN|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus litoralis (strain ATCC 51850

Query: 1 PFGGGLGTPT 10
PFGG PT
Sbjct: 11 PFGGDSKNPT 20


>sp|COFD_METLZ|2-PHOSPHO-L-LACTATE transferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 FGGGLGTP 9
F GG GTP
Sbjct: 5 FSGGTGTP 12


>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 4 GGLGTPT 10
GG+G PT
Sbjct: 55 GGIGEPT 61


>sp|Y718_METJA|UNCHARACTERIZED transporter MJ0718|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FGGGLGT 8
FGGG G+
Sbjct: 250 FGGGYGS 256


>sp|ADH_SULTO|NAD-DEPENDENT alcohol dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GGGLGT 8
GGGLGT
Sbjct: 180 GGGLGT 185


>sp|HEM3_METJA|PROBABLE porphobilinogen deaminase|Methanocaldococcus jannaschii (strain

Query: 2 FGGGLGTP 9
FGGG P
Sbjct: 229 FGGGCSVP 236


>sp|HMGCS_SACS2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PFGGGLGT 8
PFG G G+
Sbjct: 296 PFGSGAGS 303


>sp|HMGCS_SACI7|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PFGGGLGT 8
PFG G G+
Sbjct: 296 PFGSGAGS 303


>sp|HMGCS_SACI2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PFGGGLGT 8
PFG G G+
Sbjct: 296 PFGSGAGS 303


>sp|HMGCS_SACI1|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PFGGGLGT 8
PFG G G+
Sbjct: 296 PFGSGAGS 303


>sp|HMGCS_METS5|HYDROXYMETHYLGLUTARYL-COA synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PFGGGLGT 8
PFG G G+
Sbjct: 294 PFGSGAGS 301


>sp|SYDND_SULTO|ASPARTATE--TRNA(ASP/ASN) ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FGGGLGTP 9
FG +GTP
Sbjct: 296 FGDDIGTP 303


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FGGGLGTP 9
FG +GTP
Sbjct: 296 FGDDIGTP 303


>sp|HIS6_SACS2|IMIDAZOLE glycerol phosphate synthase subunit|Saccharolobus solfataricus

Query: 3 GGGLGTP 9
GGG+ TP
Sbjct: 80 GGGIRTP 86


>sp|HMGCS_SACI6|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PFGGGLGT 8
PFG G G+
Sbjct: 296 PFGSGAGS 303


>sp|HMGCS_SACI4|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PFGGGLGT 8
PFG G G+
Sbjct: 296 PFGSGAGS 303


>sp|HMGCS_SACI3|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PFGGGLGT 8
PFG G G+
Sbjct: 296 PFGSGAGS 303


>sp|HMGCS_SULTO|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PFGGGLGT 8
PFG G G+
Sbjct: 294 PFGSGAGS 301


>sp|CAPPA_THEPD|PHOSPHOENOLPYRUVATE carboxylase|Thermofilum pendens (strain DSM 2475

Query: 1 PFGGGLGTP 9
PF GG+ P
Sbjct: 236 PFRGGVNNP 244


>sp|PYRK_THEKO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermococcus kodakarensis

Query: 3 GGGLGTP 9
GGG+G P
Sbjct: 96 GGGIGIP 102


>sp|HMGCS_SULAC|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PFGGGLGT 8
PFG G G+
Sbjct: 294 PFGSGAGS 301


>sp|PCP_PYRHO|PYRROLIDONE-CARBOXYLATE peptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PFGGGLGTPT 10
PFGG PT
Sbjct: 10 PFGGDDKNPT 19


>sp|PCP_PYRAB|PYRROLIDONE-CARBOXYLATE peptidase|Pyrococcus abyssi (strain GE5 /

Query: 1 PFGGGLGTPT 10
PFGG PT
Sbjct: 10 PFGGDDKNPT 19




141|SequenceR|710|701|PSSLPPFGGG

>sp|METK_METHJ|S-ADENOSYLMETHIONINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 SLPPFGGG 10
S+P FGGG
Sbjct: 72 SMPKFGGG 79


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 1 PSSLPPFGGG 10
PS++ P+GG
Sbjct: 105 PSAVEPYGGA 114


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 SSLPPFGGG 10
S + PFGGG
Sbjct: 246 SRIQPFGGG 254


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 SSLPPFGGG 10
S + PFGGG
Sbjct: 246 SRIQPFGGG 254


>sp|METK_METB6|S-ADENOSYLMETHIONINE synthase|Methanoregula boonei (strain DSM 21154

Query: 3 SLPPFGGG 10
S P FGGG
Sbjct: 72 SCPKFGGG 79


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 1 PSSLPPFGGG 10
PS++ P+GG
Sbjct: 81 PSAVEPYGGA 90


>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PSSLPPFGGG 10
PS++ P+GG
Sbjct: 81 PSAVEPYGGA 90


>sp|METK_METTP|S-ADENOSYLMETHIONINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 SLPPFGGG 10
S P FGGG
Sbjct: 72 SRPAFGGG 79


>sp|METK_METTH|S-ADENOSYLMETHIONINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 SLPPFGGG 10
S P FGGG
Sbjct: 71 SAPQFGGG 78


>sp|METK_METTM|S-ADENOSYLMETHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 SLPPFGGG 10
S P FGGG
Sbjct: 71 SAPQFGGG 78


>sp|METK_METKA|S-ADENOSYLMETHIONINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 SLPPFGGG 10
S P FGGG
Sbjct: 72 SRPEFGGG 79


>sp|METK_METBU|S-ADENOSYLMETHIONINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 SLPPFGGG 10
S P FGGG
Sbjct: 72 SRPEFGGG 79


>sp|METK_METMA|S-ADENOSYLMETHIONINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SLPPFGGG 10
S P FGGG
Sbjct: 72 SSPKFGGG 79


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SLPPFGGG 10
S P FGGG
Sbjct: 72 SSPKFGGG 79


>sp|Y1309_METJA|UNCHARACTERIZED protein MJ1309|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SSLPPFGG 9
S +PPF G
Sbjct: 372 SGIPPFNG 379


>sp|PRIS_PYRNV|DNA primase small subunit PriS|Pyrobaculum neutrophilum (strain DSM

Query: 3 SLPPFGGG 10
+ PFGGG
Sbjct: 28 AFQPFGGG 35


>sp|PRIS_PYRAR|DNA primase small subunit PriS|Pyrobaculum arsenaticum (strain DSM

Query: 3 SLPPFGGG 10
+ PFGGG
Sbjct: 28 AFQPFGGG 35


>sp|METK_NATPD|S-ADENOSYLMETHIONINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SSLPPFGGG 10
++ P FGGG
Sbjct: 72 TAAPAFGGG 80


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PSSLPPFGGG 10
PS++ P+GG
Sbjct: 81 PSAVEPYGGA 90


>sp|SYW_ARCFU|TRYPTOPHAN--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PSSLPPFG 8
PS LP FG
Sbjct: 72 PSGLPHFG 79


>sp|CSD_AERPE|PROBABLE cysteine desulfurase|Aeropyrum pernix (strain ATCC 700893

Query: 5 PPFGGG 10
PP GGG
Sbjct: 243 PPLGGG 248


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SSLPPFGGG 10
+ LPP G G
Sbjct: 709 NQLPPVGAG 717


>sp|SRP54_HALVD|SIGNAL recognition particle 54 kDa|Haloferax volcanii (strain ATCC 29605

Query: 4 LPPFGGG 10
+P FGGG
Sbjct: 350 IPGFGGG 356


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 SLPPFGGG 10
S P FGGG
Sbjct: 72 SSPRFGGG 79


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC

Query: 1 PSSLPPFGGG 10
PS++ PF G
Sbjct: 87 PSAIDPFNGA 96


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 PSSLPPFGGG 10
PS++ PF G
Sbjct: 87 PSAIDPFNGA 96


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PSSLPPFGGG 10
PS++ PF G
Sbjct: 87 PSAIDPFNGA 96


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 PSSLPPFGGG 10
PS++ PF G
Sbjct: 87 PSAIDPFNGA 96


>sp|METK_METST|S-ADENOSYLMETHIONINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 SLPPFGGG 10
S P FGGG
Sbjct: 71 SDPKFGGG 78


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 1 PSSLPPFGGG 10
PS++ P+GG
Sbjct: 81 PSAVEPYGGA 90


>sp|METK_HALSA|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 5 PPFGGG 10
P FGGG
Sbjct: 75 PAFGGG 80


>sp|METK_HALS3|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 5 PPFGGG 10
P FGGG
Sbjct: 75 PAFGGG 80


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PSSLPPFGGG 10
PS++ PF G
Sbjct: 87 PSAIDPFNGA 96


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PSSLPPFGGG 10
PS++ PF G
Sbjct: 87 PSAIDPFNGA 96


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 1 PSSLPPFGGG 10
PS++ PF G
Sbjct: 87 PSAIDPFNGA 96


>sp|METK_ARCFU|S-ADENOSYLMETHIONINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SLPPFGGG 10
S P FGGG
Sbjct: 71 SNPQFGGG 78


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PSSLPPFGGG 10
PS++ PF G
Sbjct: 87 PSAIDPFNGA 96


>sp|METK_METJA|S-ADENOSYLMETHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SLPPFGGG 10
+ P FGGG
Sbjct: 71 AYPKFGGG 78


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PSSLPPFGGG 10
PS++ PF G
Sbjct: 87 PSAIDPFNGA 96


>sp|METK_PYRCJ|S-ADENOSYLMETHIONINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 PPFGGG 10
P FGGG
Sbjct: 71 PKFGGG 76


>sp|SYD_THEVO|ASPARTATE--TRNA(ASP) ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PSSLPPF 7
PSSL PF
Sbjct: 322 PSSLRPF 328


>sp|METK_THEKO|S-ADENOSYLMETHIONINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 SLPPFGGG 10
+ P FGGG
Sbjct: 75 AYPQFGGG 82


>sp|METK_THEGJ|S-ADENOSYLMETHIONINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 SLPPFGGG 10
+ P FGGG
Sbjct: 75 AYPQFGGG 82


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM

Query: 1 PSSLPPFGGG 10
PS++ P+GG
Sbjct: 81 PSAVEPYGGA 90


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 3 SLPPFGGG 10
S+PP GG
Sbjct: 117 SVPPLSGG 124


>sp|DP2S_HALSA|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 5 PPFGG 9
PPFGG
Sbjct: 424 PPFGG 428


>sp|DP2S_HALS3|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 5 PPFGG 9
PPFGG
Sbjct: 424 PPFGG 428


>sp|NREB_ARCFU|DNA repair protein NreB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LPPFGG 9
LPPFG
Sbjct: 136 LPPFGA 141


>sp|METK_METS3|S-ADENOSYLMETHIONINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 SLPPFGGG 10
S P FGGG
Sbjct: 71 SNPVFGGG 78


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 3 SLPPFGGG 10
+LPPF G
Sbjct: 544 TLPPFSNG 551


>sp|PURL_METS5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Metallosphaera sedula (strain ATCC 51363

Query: 1 PSSLPPFGGG 10
PS++ PF G
Sbjct: 87 PSAIDPFNGA 96




142|SequenceR|715|706|PSAKQPSSLP

>sp|MTD_METST|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaera

Query: 1 PSAKQPSS 8
P AK PSS
Sbjct: 70 PGAKSPSS 77




143|SequenceR|720|711|GGMPQPSAKQ

>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GGMPQPSAKQ 10
GG+P P ++
Sbjct: 396 GGLPVPKGRE 405


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 MPQPSAK 9
MP+PS+K
Sbjct: 1 MPEPSSK 7


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 2 GMPQPSA 8
G+PQP A
Sbjct: 681 GIPQPKA 687


>sp|RL1_NANEQ|LARGE ribosomal subunit protein uL1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GGMPQPSAKQ 10
G MP P A Q
Sbjct: 120 GKMPNPKAGQ 129


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GGMPQPS 7
GG+P+P+
Sbjct: 98 GGLPRPN 104


>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GGMPQPS 7
GG+P+P+
Sbjct: 97 GGLPRPN 103


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GGMPQPS 7
GG+P+P+
Sbjct: 98 GGLPRPN 104




144|SequenceR|725|716|GQQWGGGMPQ

>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii

Query: 1 GQQWGGGMP 9
G+ W G+P
Sbjct: 37 GEMWNAGLP 45


>sp|GLME_HALSA|GLUTAMATE mutase epsilon subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 QQWGGGMPQ 10
QW GG P+
Sbjct: 283 HQWMGGFPR 291


>sp|Y1688_HALSA|UNCHARACTERIZED protein VNG_1688C|Halobacterium salinarum (strain ATCC 700922

Query: 2 QQWGGG 7
+QWGGG
Sbjct: 50 RQWGGG 55


>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 3 QWGGGMP 9
Q GGGMP
Sbjct: 407 QPGGGMP 413


>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GQQWGGGM 8
G+ WG G+
Sbjct: 73 GKTWGSGL 80


>sp|T1SH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 2 QQWGGGMP 9
+ WGG +P
Sbjct: 48 EYWGGDIP 55


>sp|Y1485_METJA|UNCHARACTERIZED cation transporter MJ1485|Methanocaldococcus jannaschii (strain

Query: 2 QQWGGGM 8
QQW GG+
Sbjct: 139 QQWIGGV 145


>sp|TRM56_META3|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus aeolicus

Query: 2 QQWGG 6
+QWGG
Sbjct: 52 EQWGG 56


>sp|IDSA_METTH|SHORT chain isoprenyl diphosphate synthase|Methanothermobacter

Query: 1 GQQWGGGMPQ 10
G GGG PQ
Sbjct: 185 GAIMGGGSPQ 194


>sp|AMPPA_METM5|AMP phosphorylase|Methanococcus maripaludis (strain C5 /

Query: 4 WGGGM 8
WGGG+
Sbjct: 235 WGGGV 239


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 QQWGGGMP 9
++W GG P
Sbjct: 238 ERWQGGSP 245


>sp|AMPPA_METM6|AMP phosphorylase|Methanococcus maripaludis (strain C6 /

Query: 4 WGGGM 8
WGGG+
Sbjct: 235 WGGGV 239


>sp|AMPPA_METM7|AMP phosphorylase|Methanococcus maripaludis (strain C7 /

Query: 4 WGGGM 8
WGGG+
Sbjct: 235 WGGGV 239


>sp|HDRE_METMA|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina mazei (strain

Query: 2 QQWGGGM 8
Q+WG G+
Sbjct: 38 QKWGAGV 44


>sp|HDRE_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina acetivorans

Query: 2 QQWGGGM 8
Q+WG G+
Sbjct: 42 QKWGAGV 48


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GQQWGGG 7
++WGGG
Sbjct: 391 AEKWGGG 397


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 4 WGGGM 8
WGGG+
Sbjct: 235 WGGGV 239


>sp|AMPPA_METVS|AMP phosphorylase|Methanococcus vannielii (strain ATCC 35089

Query: 4 WGGGM 8
WGGG+
Sbjct: 235 WGGGV 239




145|SequenceR|730|721|WNYAGGQQWG

>sp|OTC_IGNH4|ORNITHINE carbamoyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 NYAGGQQWG 10
NYAG + WG
Sbjct: 33 NYAGRRYWG 41


>sp|Y948_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB09480|Pyrococcus abyssi (strain GE5 /

Query: 1 WNYAGGQ 7
WNY GG+
Sbjct: 230 WNYFGGK 236


>sp|NREB_ARCFU|DNA repair protein NreB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WNYAGGQQW 9
W+Y G+ W
Sbjct: 255 WSYEWGEAW 263


>sp|AROC_SACS2|CHORISMATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WNYAGG 6
+NYAGG
Sbjct: 278 YNYAGG 283


Query: 1 WNYAGG 6
W+Y GG
Sbjct: 119 WDYRGG 124


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 WNYAGGQQWG 10
W+ + G +WG
Sbjct: 226 WDISRGIKWG 235


>sp|AROC_SACI7|CHORISMATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 WNYAGG 6
+NYAGG
Sbjct: 278 YNYAGG 283


Query: 1 WNYAGG 6
W+Y GG
Sbjct: 119 WDYRGG 124


>sp|AROC_SACI6|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 WNYAGG 6
+NYAGG
Sbjct: 278 YNYAGG 283


Query: 1 WNYAGG 6
W+Y GG
Sbjct: 119 WDYRGG 124


>sp|AROC_SACI4|CHORISMATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 WNYAGG 6
+NYAGG
Sbjct: 278 YNYAGG 283


Query: 1 WNYAGG 6
W+Y GG
Sbjct: 119 WDYRGG 124


>sp|AROC_SACI3|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 WNYAGG 6
+NYAGG
Sbjct: 278 YNYAGG 283


Query: 1 WNYAGG 6
W+Y GG
Sbjct: 119 WDYRGG 124


>sp|AROC_SACI2|CHORISMATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 WNYAGG 6
+NYAGG
Sbjct: 278 YNYAGG 283


Query: 1 WNYAGG 6
W+Y GG
Sbjct: 119 WDYRGG 124


>sp|AROC_SACI1|CHORISMATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 WNYAGG 6
+NYAGG
Sbjct: 278 YNYAGG 283


Query: 1 WNYAGG 6
W+Y GG
Sbjct: 119 WDYRGG 124


>sp|FLAB2_METJA|FLAGELLIN B2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WNYAGGQ 7
WN +GG+
Sbjct: 134 WNLSGGE 140


>sp|Y1200_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB12000|Pyrococcus abyssi (strain GE5 /

Query: 1 WNYAGGQ 7
W+Y GG+
Sbjct: 213 WHYLGGK 219


>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 WNYAGG 6
WN+ GG
Sbjct: 173 WNHPGG 178


>sp|AROC_METS5|CHORISMATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 WNYAGG 6
W+Y GG
Sbjct: 119 WDYRGG 124


>sp|TRUD_THESM|PROBABLE tRNA pseudouridine synthase D|Thermococcus sibiricus (strain DSM

Query: 2 NYAGGQQWG 10
NY G Q++G
Sbjct: 167 NYFGSQRFG 175


>sp|NTPTH_METTH|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 GGQQWG 10
GG +WG
Sbjct: 42 GGSRWG 47


>sp|Y1659_METJA|UNCHARACTERIZED ATP-binding protein MJ1659|Methanocaldococcus jannaschii (strain

Query: 1 WNYAGGQ 7
W+Y GG+
Sbjct: 245 WHYFGGK 251


>sp|AROC_SULAC|CHORISMATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WNYAGG 6
W+Y GG
Sbjct: 119 WDYRGG 124


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 1 WNYAGGQQW 9
++Y GG +W
Sbjct: 771 FDYVGGLEW 779


>sp|AROC_IGNH4|CHORISMATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 WNYAGG 6
W+Y GG
Sbjct: 119 WDYRGG 124


>sp|AROC_SULTO|CHORISMATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WNYAGG 6
W+Y GG
Sbjct: 119 WDYRGG 124




146|SequenceR|735|726|PQPQQWNYAG

>sp|RIO2_METJA|RIO-TYPE serine/threonine-protein kinase Rio2|Methanocaldococcus jannaschii

Query: 1 PQPQQWN 7
P+P +WN
Sbjct: 145 PEPIEWN 151


>sp|GFO6_HALMA|D-XYLOSE 1-dehydrogenase [NADP(+)]|Haloarcula marismortui (strain ATCC 43049

Query: 1 PQPQQWNYAG 10
P P QW G
Sbjct: 187 PDPDQWRLDG 196


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 PQPQQWN 7
P+P++W+
Sbjct: 268 PEPEKWD 274


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 PQPQQWNYA 9
P P WNY+
Sbjct: 662 PMPPFWNYS 670


>sp|RNZ_PYRIL|RIBONUCLEASE Z|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PQPQQWNYAG 10
P PQ W G
Sbjct: 194 PCPQMWKTVG 203


>sp|SURE_METKA|5'-NUCLEOTIDASE SurE|Methanopyrus kandleri (strain AV19 /

Query: 1 PQPQQWN 7
P P +WN
Sbjct: 173 PDPDRWN 179


>sp|COXX1_CENSY|PROTOHEME IX farnesyltransferase 1|Cenarchaeum symbiosum (strain A)

Query: 1 PQPQQWNYA 9
P P W+YA
Sbjct: 37 PGPDLWDYA 45


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 1 PQPQQWNY 8
P P +W+Y
Sbjct: 241 PYPDRWDY 248


>sp|MOBA_NATPD|PROBABLE molybdenum cofactor guanylyltransferase|Natronomonas pharaonis

Query: 1 PQPQQW 6
P+P++W
Sbjct: 126 PRPEEW 131


>sp|SYH_PYRNV|HISTIDINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PQPQQWNY 8
P+P +W Y
Sbjct: 100 PRPVRWYY 107


>sp|SYH_PYRAR|HISTIDINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PQPQQWNY 8
P+P +W Y
Sbjct: 100 PRPVRWYY 107


>sp|SYH_PYRAE|HISTIDINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PQPQQWNY 8
P+P +W Y
Sbjct: 100 PRPVRWYY 107


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 PQPQQWNY 8
P+P +W++
Sbjct: 863 PEPVRWSF 870


>sp|BRIX_PYRHO|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus horikoshii

Query: 2 QPQQWNYAG 10
P+ W Y G
Sbjct: 72 HPEDWGYLG 80


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 QPQQWNY 8
QP+ W+Y
Sbjct: 610 QPEVWDY 616


>sp|XDH1_HALVD|D-XYLOSE 1-dehydrogenase [NADP(+)] 1|Haloferax volcanii (strain ATCC 29605

Query: 1 PQPQQW 6
P P QW
Sbjct: 189 PDPDQW 194


>sp|Y3407_METJA|UNCHARACTERIZED protein MJECS07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QPQQWNY 8
P+ WNY
Sbjct: 49 HPKYWNY 55


>sp|Y1635_METJA|TNPB-LIKE protein MJ1635|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 QQWNYA 9
+ WNYA
Sbjct: 77 ENWNYA 82


>sp|BRIX_PYRFU|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus furiosus

Query: 2 QPQQWNYAG 10
P+ W Y G
Sbjct: 72 HPEDWGYLG 80


>sp|RS15_AERPE|SMALL ribosomal subunit protein uS15|Aeropyrum pernix (strain ATCC

Query: 1 PQPQQW 6
PQP QW
Sbjct: 18 PQPPQW 23


>sp|BRIX_THEKO|PROBABLE Brix domain-containing ribosomal biogenesis|Thermococcus

Query: 3 PQQWNYAG 10
P+ W Y G
Sbjct: 73 PEDWGYIG 80


>sp|BRIX_PYRAB|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus abyssi

Query: 2 QPQQWNYAG 10
P W Y G
Sbjct: 72 HPDDWGYLG 80


>sp|RS15_SULAC|SMALL ribosomal subunit protein uS15|Sulfolobus acidocaldarius (strain

Query: 3 PQQWNY 8
PQ+W+Y
Sbjct: 134 PQEWSY 139


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PQPQQWNYA 9
P P W +A
Sbjct: 350 PNPDYWRFA 358


>sp|Y409_METJA|UNCHARACTERIZED protein MJ0409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QPQQWNYAG 10
+P +W Y G
Sbjct: 484 EPSKWYYEG 492


>sp|RS15_METS5|SMALL ribosomal subunit protein uS15|Metallosphaera sedula (strain ATCC

Query: 3 PQQWNY 8
PQ W Y
Sbjct: 134 PQDWTY 139




147|SequenceR|740|731|SPQPKPQPQQ

>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 2 PQPKPQPQQ 10
P+PKP P Q
Sbjct: 20 PEPKPGPGQ 28


>sp|Y939_SULTO|KELCH domain-containing protein STK_09390|Sulfurisphaera tokodaii (strain

Query: 2 PQPKPQ 7
P PKPQ
Sbjct: 315 PPPKPQ 320


>sp|BGAL_SACS2|BETA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 2 PQPKPQPQ 9
P P P+PQ
Sbjct: 89 PNPLPRPQ 96


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 SPQPKPQPQQ 10
SPQP+P+ Q
Sbjct: 305 SPQPQPESTQ 314


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PKPQPQQ 10
PKP+P Q
Sbjct: 406 PKPEPGQ 412


>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PQPKPQP 8
PQP P P
Sbjct: 118 PQPHPYP 124


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 2 PQPKPQ 7
P+PKP+
Sbjct: 209 PEPKPE 214


>sp|LYSY_PYRCJ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PQPKPQP 8
PQP P P
Sbjct: 116 PQPHPYP 122


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PQPKPQP 8
PQP P P
Sbjct: 115 PQPHPYP 121


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 PQPKPQPQ 9
P P PQP+
Sbjct: 306 PAPAPQPR 313


>sp|LYSY_PYRIL|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PQPKPQP 8
PQP P P
Sbjct: 116 PQPHPYP 122


>sp|LYSY_PYRNV|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PQPKPQP 8
PQP P P
Sbjct: 116 PQPHPYP 122


>sp|AGL3_SULAC|UDP-SULFOQUINOVOSE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PKPQPQQ 10
P PQPQ+
Sbjct: 49 PLPQPQE 55


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 3 QPKPQPQ 9
+P PQPQ
Sbjct: 122 EPFPQPQ 128


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 2 PQPKPQPQ 9
P+P P+P+
Sbjct: 89 PRPLPKPE 96


>sp|IF2G_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 3 QPKPQPQ 9
+P PQPQ
Sbjct: 119 EPCPQPQ 125


>sp|DNAG_THEGJ|DNA primase DnaG|Thermococcus gammatolerans (strain DSM 15229

Query: 3 QPKPQP 8
+PKPQP
Sbjct: 332 EPKPQP 337




148|SequenceR|745|736|SSHPMSPQPK

>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SHPMSPQP 9
S P+SP P
Sbjct: 511 SRPLSPSP 518


>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 3 HPMSPQP 9
HP++P P
Sbjct: 534 HPINPTP 540


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 SSHPMSPQP 9
++HP++P P
Sbjct: 426 NNHPLAPSP 434


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 HPMSPQP 9
HPM P P
Sbjct: 18 HPMQPGP 24


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 SSHPMSPQP 9
++HP+ P P
Sbjct: 422 NNHPLMPSP 430


>sp|PYRG_THEGJ|CTP synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 SHPMSPQP 9
S PM+P P
Sbjct: 510 SRPMNPAP 517


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 2 SHPMSPQP 9
S PM+P P
Sbjct: 510 SRPMNPAP 517


>sp|Y064_ARCFU|UNCHARACTERIZED protein AF_0064|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SHPMSPQPK 10
+HPMSP +
Sbjct: 179 THPMSPHAR 187


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 SSHPMSPQP 9
++HP+ P P
Sbjct: 422 NNHPLMPSP 430


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 SSHPMSPQP 9
++HP+ P P
Sbjct: 422 NNHPLMPSP 430


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 4 PMSPQP 9
P SPQP
Sbjct: 321 PQSPQP 326


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 1 SSHPMSP 7
++HP+SP
Sbjct: 452 NNHPLSP 458




149|SequenceR|750|741|PRNQPSSHPM

>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 NQPSSHP 9
N+P+SHP
Sbjct: 360 NKPASHP 366


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 RNQPSS 7
RNQPSS
Sbjct: 81 RNQPSS 86


>sp|G6PI_HALWD|PROBABLE glucose-6-phosphate isomerase|Haloquadratum walsbyi (strain DSM

Query: 1 PRNQPS 6
PRN+PS
Sbjct: 312 PRNRPS 317


>sp|FUMC_HALSA|FUMARATE hydratase class II|Halobacterium salinarum (strain ATCC 700922

Query: 1 PRNQPSSHPM 10
P NQP S M
Sbjct: 312 PENQPGSSIM 321


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 2 RNQPSSHP 9
RN P HP
Sbjct: 438 RNGPEGHP 445


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 2 RNQPSSHP 9
RN P HP
Sbjct: 438 RNGPEGHP 445




150|SequenceR|755|746|SVNYNPRNQP

>sp|Y1986_AERPE|UNCHARACTERIZED protein APE_1986.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 SVNYNPRN 8
S NY PRN
Sbjct: 39 SENYTPRN 46


>sp|THIE_METAC|THIAMINE-PHOSPHATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 NYNPRNQP 10
N NP+N P
Sbjct: 5 NSNPKNPP 12


>sp|MVP5K_THEAC|MEVALONATE-3-PHOSPHATE 5-kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VNYNPRNQP 10
+NY RN P
Sbjct: 141 INYTHRNSP 149


>sp|AGLR_HALVD|PROBABLE flippase AglR|Haloferax volcanii (strain ATCC 29605

Query: 2 VNYNPRNQP 10
+NY P QP
Sbjct: 430 LNYRPIGQP 438


>sp|TRMY_METMP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 SVNYNPRNQP 10
SVNY N P
Sbjct: 54 SVNYGSPNPP 63


>sp|TRMY_METM6|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 SVNYNPRNQP 10
SVNY N P
Sbjct: 54 SVNYGSPNPP 63


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 2 VNYNP 6
VNYNP
Sbjct: 601 VNYNP 605


>sp|Y739_METJA|UNCHARACTERIZED protein MJ0739|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VNYNP 6
VNYNP
Sbjct: 8 VNYNP 12


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 VNYNPRNQ 9
+ Y+PRN+
Sbjct: 607 IKYSPRNR 614


>sp|UVRC_HALWD|UVRABC system protein C|Haloquadratum walsbyi (strain DSM 16790

Query: 4 YNPRNQP 10
YN RN+P
Sbjct: 154 YNNRNRP 160


>sp|TRMY_METM7|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 SVNYNPRNQP 10
SVNY N P
Sbjct: 54 SVNYGDPNPP 63


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 NYNPRN 8
N+NPRN
Sbjct: 262 NFNPRN 267


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 1 SVNYNP 6
+VNYNP
Sbjct: 774 TVNYNP 779




151|SequenceR|760|751|PMASFSVNYN

***** No hits found ******


152|SequenceR|765|756|ENQGGPMASF

>sp|SYR_METBU|ARGININE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ENQGGPMASF 10
E QGGP +
Sbjct: 440 EKQGGPFIQY 449


>sp|DCD_HALWD|DCTP deaminase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ENQGGPMAS 9
+NQ GP AS
Sbjct: 175 QNQTGPQAS 183


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 QGGPMA 8
QGGP+A
Sbjct: 570 QGGPLA 575


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 3 QGGPMAS 9
+GGP+AS
Sbjct: 576 KGGPLAS 582




153|SequenceR|770|761|SGKGRENQGG

>sp|SELD_METMP|SELENIDE, water dikinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SGKGRENQGG 10
SGKG E GG
Sbjct: 277 SGKGAETAGG 286


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GKGRENQGG 10
GKGRE G
Sbjct: 287 GKGREKGGA 295




154|SequenceR|775|766|GELNSSGKGR

>sp|PUS10_THEAC|TRNA pseudouridine synthase Pus10|Thermoplasma acidophilum (strain ATCC

Query: 2 ELNSSGKG 9
E+N+SGKG
Sbjct: 245 EINTSGKG 252


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 1 GELNSSGK 8
GELNS+ K
Sbjct: 304 GELNSAAK 311


>sp|Y758_ARCFU|UNCHARACTERIZED protein AF_0758|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GELNSSGKGR 10
GEL+ G GR
Sbjct: 202 GELSIGGSGR 211


>sp|SYT_METTH|THREONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GELNSSGK 8
GEL SSG+
Sbjct: 184 GELESSGE 191


>sp|Y1326_METJA|UNCHARACTERIZED GTP-binding protein MJ1326|Methanocaldococcus jannaschii (strain

Query: 5 SSGKGR 10
SSGKGR
Sbjct: 146 SSGKGR 151


>sp|IF2B_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 2 ELNSSGKGR 10
E+ SSG+GR
Sbjct: 157 EVGSSGEGR 165


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 ELNSSGKGR 10
ELN+SG R
Sbjct: 15 ELNNSGANR 23


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 ELNSSGKGR 10
ELN+SG R
Sbjct: 15 ELNNSGANR 23


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 ELNSSGKGR 10
ELN+SG R
Sbjct: 15 ELNNSGANR 23


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 ELNSSGKGR 10
ELN+SG R
Sbjct: 15 ELNNSGANR 23


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 ELNSSGKGR 10
ELN+SG R
Sbjct: 15 ELNNSGANR 23


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 ELNSSGKGR 10
ELN+SG R
Sbjct: 15 ELNNSGANR 23


>sp|DHQS_NITMS|3-DEHYDROQUINATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 LNSSGKGR 10
LNS GK R
Sbjct: 265 LNSKGKAR 272


>sp|IF2B_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 ELNSSGKGR 10
E+ SSG+GR
Sbjct: 157 EVGSSGEGR 165




155|SequenceR|780|771|AAKQKGELNS

>sp|GCSH3_SACS2|PROBABLE glycine cleavage system H|Saccharolobus solfataricus (strain ATCC

Query: 2 AKQKGE 7
AKQKGE
Sbjct: 50 AKQKGE 55


>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AKQKGE 7
AKQKGE
Sbjct: 409 AKQKGE 414


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 3 KQKGELN 9
K+KGE+N
Sbjct: 495 KEKGEIN 501




156|SequenceR|785|776|LDEFDAAKQK

>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 1 LDEFDAAKQK 10
DEFD AK K
Sbjct: 717 FDEFDPAKHK 726


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 LDEFDAAKQK 10
DEFD AK K
Sbjct: 1641 FDEFDPAKHK 1650


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LDEFDAAKQK 10
LD+FD A +K
Sbjct: 290 LDDFDEASRK 299


>sp|DPHB_THEVO|DIPHTHINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LDEFDAAK 8
LDEFDA +
Sbjct: 17 LDEFDALR 24


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 1 LDEFDAAKQK 10
DEFD AK +
Sbjct: 717 FDEFDPAKHR 726


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LDEFDAAKQK 10
DEFD K K
Sbjct: 1614 FDEFDPTKHK 1623


>sp|FOLD_METTP|BIFUNCTIONAL protein FolD|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 EFDAAKQK 10
+FDA K+K
Sbjct: 237 DFDAVKEK 244


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LDEFDAAK 8
LD+FD AK
Sbjct: 711 LDKFDPAK 718




157|SequenceR|790|781|GQGSLLDEFD

>sp|PELO_PYRAR|PROTEIN pelota homolog|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 QGSLLDEF 9
+GSLLDEF
Sbjct: 168 EGSLLDEF 175


>sp|NIKR2_METAC|PUTATIVE nickel-responsive regulator 2|Methanosarcina acetivorans (strain

Query: 3 GSLLDEFD 10
G LLD+FD
Sbjct: 14 GELLDKFD 21


>sp|Y675_METJA|UNCHARACTERIZED protein MJ0675|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GQGSLLDEF 9
G+G +LDEF
Sbjct: 118 GRGIVLDEF 126


>sp|NIKR_ARCFU|PUTATIVE nickel-responsive regulator|Archaeoglobus fulgidus (strain ATCC

Query: 4 SLLDEFD 10
+LLDEFD
Sbjct: 15 NLLDEFD 21


>sp|NIKR3_METMA|PUTATIVE nickel-responsive regulator 3|Methanosarcina mazei (strain ATCC

Query: 3 GSLLDEFD 10
G LLD+FD
Sbjct: 14 GELLDKFD 21


>sp|PCNA2_SULAC|DNA polymerase sliding clamp 2|Sulfolobus acidocaldarius (strain ATCC

Query: 3 GSLLDEFD 10
G LLDEFD
Sbjct: 139 GDLLDEFD 146


>sp|GGGPS_THEVO|GERANYLGERANYLGLYCERYL phosphate synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GQGSLLDEFD 10
G+ +L+D FD
Sbjct: 141 GKANLIDSFD 150


>sp|DPO4_HALSA|DNA polymerase IV|Halobacterium salinarum (strain ATCC 700922

Query: 4 SLLDEFD 10
SLLDEF+
Sbjct: 344 SLLDEFE 350


>sp|DPO4_HALS3|DNA polymerase IV|Halobacterium salinarum (strain ATCC 29341

Query: 4 SLLDEFD 10
SLLDEF+
Sbjct: 344 SLLDEFE 350


>sp|HYPA_METJA|HYDROGENASE maturation factor HypA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GQGSLLDEFD 10
G+ +LDEF+
Sbjct: 85 GEPEILDEFE 94


>sp|CDPAS_THEAC|CDP-ARCHAEOL synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GQGSLLDEF 9
G+G LLD++
Sbjct: 113 GKGGLLDQW 121


>sp|KAE1_IGNH4|TRNA N6-adenosine threonylcarbamoyltransferase|Ignicoccus hospitalis

Query: 1 GQGSLLDEF 9
G G+LLD F
Sbjct: 155 GLGNLLDTF 163


>sp|RLME_META3|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus aeolicus (strain

Query: 2 QGSLLDEF 9
QGSL D++
Sbjct: 163 QGSLFDQY 170




158|SequenceR|795|786|KHANFGQGSL

>sp|FUMC_SACS2|FUMARATE hydratase class II|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 HANFGQGS 9
H NFGQ S
Sbjct: 105 HVNFGQSS 112


>sp|TRPD_PICTO|ANTHRANILATE phosphoribosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 KHANFG 6
KH NFG
Sbjct: 102 KHGNFG 107


>sp|OTC_METJA|ORNITHINE carbamoyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 NFGQGSL 10
N+G+GSL
Sbjct: 197 NYGEGSL 203


>sp|IDH_HALVD|ISOCITRATE dehydrogenase [NADP]|Haloferax volcanii (strain ATCC 29605

Query: 3 ANFGQG 8
ANFG+G
Sbjct: 325 ANFGEG 330


>sp|RL3_SULAC|LARGE ribosomal subunit protein uL3|Sulfolobus acidocaldarius (strain

Query: 3 ANFGQGSL 10
ANF +GSL
Sbjct: 107 ANFEEGSL 114


>sp|ARCC_THEAC|CARBAMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KHANFGQGSL 10
K FG+GS+
Sbjct: 256 KEGQFGEGSM 265


>sp|FUMC_HALSA|FUMARATE hydratase class II|Halobacterium salinarum (strain ATCC 700922

Query: 2 HANFGQGS 9
H N+GQ S
Sbjct: 133 HVNYGQSS 140


>sp|SYDND_SULTO|ASPARTATE--TRNA(ASP/ASN) ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 HANFGQG 8
HA FG G
Sbjct: 394 HAGFGMG 400


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 HANFGQG 8
HA FG G
Sbjct: 394 HAGFGMG 400


>sp|PSB_ACIB4|PROTEASOME subunit beta|Aciduliprofundum boonei (strain DSM 19572

Query: 1 KHANFGQGSL 10
K+A+ G GSL
Sbjct: 131 KYASVGSGSL 140




159|SequenceR|800|791|PGKKDKHANF

>sp|DNLI_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PGKKDKH 7
PGK+ KH
Sbjct: 415 PGKRGKH 421


>sp|IF2G_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 PGKKDKHANF 10
PG KD+ N+
Sbjct: 271 PGVKDERGNW 280


>sp|RNP2_METTH|RIBONUCLEASE P protein component 2|Methanothermobacter thermautotrophicus

Query: 1 PGKKDKH 7
P KKDK+
Sbjct: 118 PSKKDKY 124


>sp|Y427_METJA|UNCHARACTERIZED protein MJ0427|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KDKHANF 10
KD++ANF
Sbjct: 64 KDRYANF 70


>sp|GMHA_THEVO|PROBABLE phosphoheptose isomerase|Thermoplasma volcanium (strain ATCC

Query: 2 GKKDKHA 8
G+KDK+A
Sbjct: 2 GRKDKYA 8




160|SequenceR|805|796|EAITRPGKKD

>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 EAITRPGKKD 10
EAI RPG+ D
Sbjct: 306 EAILRPGRFD 315


>sp|PGK2_METAC|PHOSPHOGLYCERATE kinase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 TRPGKKD 10
+RPGKKD
Sbjct: 67 SRPGKKD 73


>sp|PGK_ARCFU|PHOSPHOGLYCERATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 TRPGKKD 10
+RPGKKD
Sbjct: 62 SRPGKKD 68


>sp|PGK_METJA|PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 TRPGKKD 10
+RPGKKD
Sbjct: 64 SRPGKKD 70


>sp|PGK_METMP|PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 4 TRPGKKD 10
+RPGKKD
Sbjct: 62 SRPGKKD 68


>sp|PGK_METMA|PHOSPHOGLYCERATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 TRPGKKD 10
+RPGKKD
Sbjct: 67 SRPGKKD 73


>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 4 TRPGKKD 10
+RPGKKD
Sbjct: 65 SRPGKKD 71


>sp|PGK_METLZ|PHOSPHOGLYCERATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 TRPGKKD 10
+RPGKKD
Sbjct: 61 SRPGKKD 67


>sp|PGK_METFV|PHOSPHOGLYCERATE kinase|Methanothermus fervidus (strain ATCC 43054

Query: 4 TRPGKKD 10
+RPGK+D
Sbjct: 64 SRPGKRD 70


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 AITRPGKKD 10
AIT PGK++
Sbjct: 698 AITVPGKQE 706


>sp|PGK_PICTO|PHOSPHOGLYCERATE kinase|Picrophilus torridus (strain ATCC 700027

Query: 4 TRPGKKD 10
+RPGK D
Sbjct: 63 SRPGKND 69


>sp|MPTA_METHJ|GTP cyclohydrolase MptA|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 ITRPGKK 9
+TRPGK+
Sbjct: 43 VTRPGKR 49


>sp|PGK_METTH|PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 TRPGKKD 10
+RPGK D
Sbjct: 70 SRPGKND 76


>sp|CBID_SULAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 ITRPGKK 9
ITRPG K
Sbjct: 109 ITRPGLK 115


>sp|SECD_METKA|PROTEIN-EXPORT membrane protein SecD|Methanopyrus kandleri (strain AV19 /

Query: 1 EAITRPGK 8
E IT+PG+
Sbjct: 100 ELITKPGR 107


>sp|IF2P_ARCFU|PROBABLE translation initiation factor IF-2|Archaeoglobus fulgidus (strain

Query: 1 EAITRPGK 8
EA+ +PGK
Sbjct: 463 EALIKPGK 470


>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum (strain

Query: 3 ITRPGK 8
+TRPGK
Sbjct: 466 LTRPGK 471


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 3 ITRPGK 8
+TRPGK
Sbjct: 466 LTRPGK 471




161|SequenceR|810|801|EEKRMEAITR

>sp|COBQ_HALSA|PROBABLE cobyric acid synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 EKRMEAITR 10
+KR+EA+TR
Sbjct: 393 DKRVEAVTR 401


>sp|COBQ_HALS3|PROBABLE cobyric acid synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 EKRMEAITR 10
+KR+EA+TR
Sbjct: 393 DKRVEAVTR 401


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 EEKRMEAI 8
EE+R+EA+
Sbjct: 102 EEQRLEAV 109




162|SequenceR|815|806|MEKAMEEKRM

>sp|SDO1_METTH|RIBOSOME maturation protein SDO1 homolog|Methanothermobacter

Query: 1 MEKAMEEKRM 10
+EKAMEE R+
Sbjct: 126 IEKAMEEARV 135


>sp|SDO1_METJA|RIBOSOME maturation protein SDO1 homolog|Methanocaldococcus jannaschii

Query: 1 MEKAMEEKRM 10
+EKAMEE R+
Sbjct: 130 IEKAMEELRI 139


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 MEKAMEEKRM 10
M+K MEEK +
Sbjct: 247 MQKDMEEKEL 256


>sp|AMPPA_METHJ|AMP phosphorylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 MEKAMEEKR 9
+EKA+EE R
Sbjct: 478 LEKAIEEAR 486


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MEKAMEEKR 9
+EK +EEKR
Sbjct: 609 LEKVIEEKR 617




163|SequenceR|820|811|LKEPDMEKAM

>sp|FEN_ARCFU|FLAP endonuclease 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LKEPDMEKAM 10
+EPD EKA+
Sbjct: 292 FREPDFEKAI 301


>sp|SUCC_PYRIL|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum islandicum (strain

Query: 1 LKEPDMEKAM 10
K PD+EKA+
Sbjct: 218 FKHPDLEKAL 227


>sp|RL3_ARCFU|LARGE ribosomal subunit protein uL3|Archaeoglobus fulgidus (strain ATCC

Query: 2 KEPDMEK 8
KEPD+EK
Sbjct: 117 KEPDVEK 123


>sp|Y1717_ARCFU|UNCHARACTERIZED protein AF_1717|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LKEPDMEKAM 10
L++PD++KA+
Sbjct: 117 LRDPDVQKAI 126


>sp|Y1316_METTH|UPF0215 protein MTH_1316|Methanothermobacter thermautotrophicus (strain

Query: 2 KEPDMEK 8
K PDME+
Sbjct: 116 KHPDMER 122


>sp|SUCC_PYRAE|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum aerophilum (strain

Query: 1 LKEPDMEKAM 10
K P++EKA+
Sbjct: 218 FKHPELEKAL 227


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 EPDMEKA 9
EPD+E+A
Sbjct: 524 EPDLERA 530


>sp|FEN_METMJ|FLAP endonuclease 1|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LKEPDMEKA 9
L+E DME+A
Sbjct: 110 LREGDMEEA 118


>sp|PYRG_THEGJ|CTP synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 KEPDMEK 8
+EPD+EK
Sbjct: 268 REPDLEK 274


>sp|SUCC_PYRAR|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum arsenaticum (strain

Query: 2 KEPDMEKAM 10
K P++EKA+
Sbjct: 219 KHPELEKAL 227


>sp|DNLI_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 EPDMEKAM 10
EPD+E+A+
Sbjct: 190 EPDVERAL 197




164|SequenceR|825|816|WELIKLKEPD

>sp|RL3_SULAC|LARGE ribosomal subunit protein uL3|Sulfolobus acidocaldarius (strain

Query: 1 WELIKLKEP 9
W L+ LKEP
Sbjct: 32 WPLVNLKEP 40


>sp|T1S2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii (strain

Query: 1 WELIKLKE 8
WE++KLKE
Sbjct: 223 WEVVKLKE 230


>sp|LEU1_METMA|PROBABLE 2-isopropylmalate synthase|Methanosarcina mazei (strain ATCC

Query: 2 ELIKLKE 8
ELIKLKE
Sbjct: 396 ELIKLKE 402


>sp|LEU1_METAC|PROBABLE 2-isopropylmalate synthase|Methanosarcina acetivorans (strain ATCC

Query: 2 ELIKLKE 8
ELIKLKE
Sbjct: 396 ELIKLKE 402


>sp|PELO_METM5|PROTEIN pelota homolog|Methanococcus maripaludis (strain C5 /

Query: 1 WELIKLKEPD 10
W+L++LKE +
Sbjct: 117 WDLVRLKEAE 126


>sp|HCGF_METJA|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanocaldococcus jannaschii

Query: 4 IKLKEPD 10
IKL EPD
Sbjct: 66 IKLPEPD 72


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 ELIKLKEPD 10
+LIK EPD
Sbjct: 420 QLIKQHEPD 428


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 WELIKLKEPD 10
W+ +KLKE +
Sbjct: 166 WQFLKLKEKN 175


>sp|PELO_METVS|PROTEIN pelota homolog|Methanococcus vannielii (strain ATCC 35089

Query: 1 WELIKLKEPD 10
W+L +LKE +
Sbjct: 117 WDLTRLKEAE 126


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WELIKLKE 8
WE+I+LK+
Sbjct: 243 WEIIRLKK 250


>sp|NREA_HALVD|DNA repair protein NreA|Haloferax volcanii (strain ATCC 29605

Query: 1 WELIKLKEP 9
+ELI+LK P
Sbjct: 284 FELIELKAP 292


>sp|REG5_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH1055|Pyrococcus horikoshii

Query: 1 WELIKLKEPD 10
WE+IKL + D
Sbjct: 11 WEIIKLLKKD 20


>sp|TAL_NITMS|PROBABLE transaldolase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 WELIKLKEPD 10
WE +K + PD
Sbjct: 210 WEKVKAENPD 219


>sp|PTFA_HALVD|PTS system fructose-specific EIIA component|Haloferax volcanii

Query: 1 WELIKLKEP 9
ELI L+EP
Sbjct: 12 LELISLEEP 20


>sp|CCA_METAC|CCA-ADDING enzyme|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ELIKLKEPD 10
E+ +LK+PD
Sbjct: 437 EICRLKDPD 445


>sp|PROA_METMA|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ELIKLKEP 9
++IKLK+P
Sbjct: 89 DVIKLKDP 96


>sp|Y011_METJA|UNCHARACTERIZED protein MJ0011|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELIKLKEPD 10
ELIK+KE D
Sbjct: 104 ELIKVKEVD 112


>sp|CBIM_METJA|PUTATIVE cobalt transport protein CbiM|Methanocaldococcus jannaschii (strain

Query: 1 WELIKLKEPD 10
W+ IK PD
Sbjct: 199 WDYIKKLRPD 208


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 WELIKLKE 8
W+ +KLKE
Sbjct: 165 WQFLKLKE 172




165|SequenceR|830|821|EKGEIWELIK

>sp|Y1065_METJA|UNCHARACTERIZED protein MJ1065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GEIWELIK 10
GEIWE +K
Sbjct: 148 GEIWEAVK 155


>sp|Y1577_ARCFU|UNCHARACTERIZED protein AF_1577|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KGEIWELI 9
+G+IW LI
Sbjct: 13 RGQIWNLI 20


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 1 EKGEIWELIK 10
++G +WEL++
Sbjct: 325 KEGNLWELVE 334


>sp|ATGT_METM5|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C5 /

Query: 1 EKGEIWELIK 10
++G +WEL++
Sbjct: 325 KEGNLWELVE 334


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EKGEIWELIK 10
++G +WEL++
Sbjct: 325 KEGNLWELVE 334


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 1 EKGEIWELIK 10
++G +WEL++
Sbjct: 325 KEGNLWELVE 334


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 3 GEIWEL 8
GE+WEL
Sbjct: 322 GELWEL 327


>sp|MPTA_META3|GTP cyclohydrolase MptA|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GEIWELIK 10
GE++EL+K
Sbjct: 229 GEVYELLK 236


>sp|ACDD2_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 2 KGEIWELI 9
+G IWE+I
Sbjct: 380 RGPIWEII 387


>sp|ATGT_METVS|TRNA-GUANINE(15) transglycosylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EKGEIWELIK 10
+ G +WEL++
Sbjct: 325 KDGNLWELVE 334


>sp|ACDD_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit delta|Archaeoglobus fulgidus

Query: 2 KGEIWELI 9
+G IWE+I
Sbjct: 395 RGPIWEII 402


>sp|MOAA_THEKO|PROBABLE GTP 3',8-cyclase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GEIWELIK 10
GEIW++++
Sbjct: 163 GEIWDMVE 170


>sp|Y1137_METTH|UNCHARACTERIZED protein MTH_1137|Methanothermobacter thermautotrophicus (strain

Query: 3 GEIWELIK 10
G WE+IK
Sbjct: 13 GTAWEIIK 20


>sp|HIS1_SULAC|ATP phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 KGEIWELI 9
KG+ WE+I
Sbjct: 245 KGDAWEVI 252


>sp|MOAA_AERPE|PROBABLE GTP 3',8-cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 2 KGEIWELIK 10
+GE W L++
Sbjct: 168 EGEFWRLLR 176


>sp|COFD_METTH|2-PHOSPHO-L-LACTATE transferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 KGEIWELIK 10
KGEI +LIK
Sbjct: 271 KGEIEKLIK 279


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EKGEIWELI 9
++GE+W L+
Sbjct: 324 KEGELWRLV 332


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 2 KGEIWELIK 10
+G +WEL++
Sbjct: 318 EGRLWELLE 326


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EKGEIWELI 9
++GE+W L+
Sbjct: 320 KEGELWRLV 328


>sp|MPTA_METM7|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C7 /

Query: 3 GEIWELIK 10
GE++EL+K
Sbjct: 231 GEVYELLK 238


>sp|MPTA_METMP|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain DSM 14266

Query: 3 GEIWELIK 10
GE++EL+K
Sbjct: 231 GEVYELLK 238


>sp|Y290_METJA|UNCHARACTERIZED protein MJ0290|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKGEIWELIK 10
++GEI ELIK
Sbjct: 6 KQGEIKELIK 15


>sp|SPT5_METJA|TRANSCRIPTION elongation factor Spt5|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KGEIWELIK 10
KG++ ELIK
Sbjct: 50 KGDVEELIK 58


>sp|GSA_HYPBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Hyperthermus butylicus (strain DSM 5456

Query: 2 KGEIW 6
KGE+W
Sbjct: 361 KGEVW 365


>sp|ALAXM_PYRHO|ALANYL-TRNA editing protein AlaX-M|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EKGEIWELIK 10
E+G +W ++K
Sbjct: 63 EEGNVWHVVK 72




166|SequenceR|835|826|ARINREKGEI

>sp|RAD50_AERPE|DNA double-strand break repair Rad50|Aeropyrum pernix (strain ATCC

Query: 1 ARINREKGEI 10
+RI+RE GE+
Sbjct: 727 SRIDREMGEL 736


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 INREKGEI 10
+NRE GEI
Sbjct: 144 VNRENGEI 151


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 4 NREKGEI 10
N+EKGEI
Sbjct: 497 NKEKGEI 503


>sp|LEUD_SULAC|3-ISOPROPYLMALATE dehydratase small subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 2 RINREKGEI 10
R+N E GEI
Sbjct: 119 RVNVETGEI 127


>sp|COFG_METTH|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 INREKGEI 10
+NRE GEI
Sbjct: 243 LNRETGEI 250


>sp|Y1337_METJA|UNCHARACTERIZED protein MJ1337|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RINREKGEI 10
+INR+ GEI
Sbjct: 198 KINRKLGEI 206


>sp|SECE_METBU|PROTEIN translocase subunit SecE|Methanococcoides burtonii (strain DSM

Query: 1 ARINREKGEI 10
A+INR G++
Sbjct: 9 AKINRNVGQV 18


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 INREKGEI 10
INR+KG I
Sbjct: 363 INRDKGVI 370


>sp|PMDHS_PYRHO|PHOSPHOMEVALONATE dehydratase small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ARINREKGEI 10
RIN ++GE+
Sbjct: 117 VRINPQEGEV 126




167|SequenceR|840|831|MTSLLARINR

>sp|ARE_SACSO|ARYLESTERASE solfataricus (Sulfolobus solfataricus)

Query: 2 TSLLARINR 10
TSLLAR N+
Sbjct: 165 TSLLARDNK 173




168|SequenceR|845|836|WLVTHMTSLL

>sp|GVPL1_HALSA|GAS vesicle protein L1|Halobacterium salinarum (strain ATCC 700922

Query: 1 WLVTH 5
WLVTH
Sbjct: 81 WLVTH 85


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WLVTHMTSL 9
WL THM L
Sbjct: 715 WLKTHMEFL 723


>sp|GVPL2_HALSA|GAS vesicle protein L2|Halobacterium salinarum (strain ATCC 700922

Query: 1 WLVTH 5
WLVTH
Sbjct: 73 WLVTH 77




169|SequenceR|850|841|KTEGAWLVTH

>sp|RS11_METTP|SMALL ribosomal subunit protein uS11|Methanothrix thermoacetophila

Query: 2 TEGAWLVTH 10
TEG W + H
Sbjct: 2 TEGKWAIAH 10


>sp|G1PDH_METMJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoculleus marisnigri (strain ATCC

Query: 3 EGAWLVT 9
E AWLVT
Sbjct: 232 ESAWLVT 238


>sp|FAU1_STAMF|PROBABLE ribonuclease FAU-1|Staphylothermus marinus (strain ATCC 43588

Query: 3 EGAWLVTH 10
E +W+++H
Sbjct: 381 ENSWIISH 388


>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KTEGAWLVT 9
K+EGA+L T
Sbjct: 34 KSEGAFLYT 42


>sp|GVPL1_HALSA|GAS vesicle protein L1|Halobacterium salinarum (strain ATCC 700922

Query: 6 WLVTH 10
WLVTH
Sbjct: 81 WLVTH 85


>sp|GVPL2_HALSA|GAS vesicle protein L2|Halobacterium salinarum (strain ATCC 700922

Query: 6 WLVTH 10
WLVTH
Sbjct: 73 WLVTH 77


>sp|MRE11_PYRAB|DNA double-strand break repair protein|Pyrococcus abyssi (strain GE5 /

Query: 1 KTEGAWLV 8
KT+ WLV
Sbjct: 125 KTKAGWLV 132


>sp|DHYS_PYRFU|PROBABLE deoxyhypusine synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 AWLVTH 10
AWLV H
Sbjct: 88 AWLVKH 93




170|SequenceR|855|846|GVPKWKTEGA

>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PKWKTEG 9
P+W++EG
Sbjct: 309 PQWESEG 315


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 GVPKWKT 7
G PKWK+
Sbjct: 189 GEPKWKS 195


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PKWKTEG 9
P+W +EG
Sbjct: 310 PQWDSEG 316


>sp|MCH_HALMA|MESACONYL-COA hydratase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GVPKWKTEG 9
G+ W+TEG
Sbjct: 147 GIVTWETEG 155


>sp|RL10_STAMF|LARGE ribosomal subunit protein uL10|Staphylothermus marinus (strain

Query: 2 VPKWKTE 8
+P+WK E
Sbjct: 12 IPQWKIE 18


>sp|MCH_HALHT|MESACONYL-COA hydratase|Haloarcula hispanica (strain ATCC 33960

Query: 1 GVPKWKTEG 9
G+ W+TEG
Sbjct: 147 GIVTWETEG 155


>sp|CIMA_SULAC|(R)-CITRAMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GVPKWKTEG 9
G W+TEG
Sbjct: 481 GEKNWRTEG 489


>sp|RL10_HALMA|LARGE ribosomal subunit protein uL10|Haloarcula marismortui (strain

Query: 2 VPKWKTE 8
+P+WK E
Sbjct: 12 IPEWKQE 18


>sp|RL10_HALVD|LARGE ribosomal subunit protein uL10|Haloferax volcanii (strain ATCC

Query: 2 VPKWKTE 8
+P+WK E
Sbjct: 12 IPQWKRE 18


>sp|KADA_META3|ADENYLATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GVPKW 5
G+PKW
Sbjct: 104 GLPKW 108


>sp|CDVA_SULAC|CELL division protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VPKWKTE 8
+P WKT+
Sbjct: 67 LPDWKTD 73


>sp|SFSA_SULAC|SUGAR fermentation stimulation protein homolog|Sulfolobus acidocaldarius

Query: 3 PKWKTE 8
P WKT+
Sbjct: 174 PNWKTD 179


>sp|RAD50_NANEQ|DNA double-strand break repair Rad50|Nanoarchaeum equitans (strain

Query: 1 GVPKWKTEGA 10
G+PK EGA
Sbjct: 654 GIPKALREGA 663


>sp|GATA_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Halobacterium salinarum (strain ATCC

Query: 1 GVPKWKTEGA 10
GVP+ T+GA
Sbjct: 212 GVPQELTDGA 221


>sp|RS7_PYRAE|SMALL ribosomal subunit protein uS7|Pyrobaculum aerophilum (strain ATCC

Query: 4 KWKTEGA 10
+W TEGA
Sbjct: 171 RWITEGA 177


>sp|CBIX_SACS2|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VPKWKTEG 9
+P+WK G
Sbjct: 13 IPEWKDVG 20


>sp|RS7_PYRIL|SMALL ribosomal subunit protein uS7|Pyrobaculum islandicum (strain DSM

Query: 4 KWKTEGA 10
+W TEGA
Sbjct: 172 RWITEGA 178


>sp|RS7_PYRNV|SMALL ribosomal subunit protein uS7|Pyrobaculum neutrophilum (strain DSM

Query: 4 KWKTEGA 10
+W TEGA
Sbjct: 172 RWITEGA 178


>sp|RL2_IGNH4|LARGE ribosomal subunit protein uL2|Ignicoccus hospitalis (strain

Query: 1 GVPKWKTEG 9
G P+W+ G
Sbjct: 13 GTPQWRNRG 21


>sp|RL10_NATPD|LARGE ribosomal subunit protein uL10|Natronomonas pharaonis (strain

Query: 2 VPKWKTE 8
+P+WK E
Sbjct: 11 IPEWKQE 17


>sp|CBIX_SACI6|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 VPKWKTEG 9
+P+WK G
Sbjct: 13 IPEWKDVG 20


>sp|CBIX_SACI4|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VPKWKTEG 9
+P+WK G
Sbjct: 13 IPEWKDVG 20


>sp|CBIX_SACI3|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.16.27)

Query: 2 VPKWKTEG 9
+P+WK G
Sbjct: 13 IPEWKDVG 20


>sp|CBIX_SACI2|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 VPKWKTEG 9
+P+WK G
Sbjct: 13 IPEWKDVG 20


>sp|CBIX_SACI1|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 VPKWKTEG 9
+P+WK G
Sbjct: 13 IPEWKDVG 20


>sp|HIS8_HALVD|HISTIDINOL-PHOSPHATE aminotransferase|Haloferax volcanii (strain ATCC 29605

Query: 3 PKWKTEG 9
P W++EG
Sbjct: 292 PTWESEG 298


>sp|CBIX_SACI7|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 VPKWKTEG 9
+P+WK G
Sbjct: 13 IPEWKDVG 20


>sp|TRM56_METBU|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcoides burtonii

Query: 2 VPKWKTEG 9
+ KWK EG
Sbjct: 71 IEKWKEEG 78


>sp|MOBA_THESM|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus sibiricus

Query: 2 VPKWKT 7
VPKWK
Sbjct: 118 VPKWKN 123


>sp|CSD_AERPE|PROBABLE cysteine desulfurase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GVPKW 5
GVP+W
Sbjct: 145 GVPRW 149




171|SequenceR|860|851|VLDAMGVPKW

>sp|SYH_THEKO|HISTIDINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VLDAMGVPKW 10
+LDA GV KW
Sbjct: 252 LLDAYGVSKW 261


>sp|FEN_SULAC|FLAP endonuclease 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VLDAMGVP 8
+LDAMG+P
Sbjct: 138 LLDAMGIP 145


>sp|FEN_METTP|FLAP endonuclease 1|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VLDAMGVP 8
+LDAMG+P
Sbjct: 136 LLDAMGIP 143


>sp|PFP_THETK|PYROPHOSPHATE--FRUCTOSE 6-phosphate 1-phosphotransferase|Thermoproteus tenax (strain ATCC

Query: 1 VLDAMGVPK 9
+LDA+G+PK
Sbjct: 115 ILDAVGIPK 123


>sp|FEN_HYPBU|FLAP endonuclease 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 VLDAMGVP 8
+LDAMGVP
Sbjct: 141 LLDAMGVP 148


>sp|FEN_STAMF|FLAP endonuclease 1|Staphylothermus marinus (strain ATCC 43588

Query: 1 VLDAMGVP 8
+LDAMG+P
Sbjct: 142 LLDAMGIP 149


>sp|FEN_CALMQ|FLAP endonuclease 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 VLDAMGVP 8
+LD+MGVP
Sbjct: 142 LLDSMGVP 149


>sp|FEN_AERPE|FLAP endonuclease 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 VLDAMGVP 8
+LDAMG+P
Sbjct: 141 LLDAMGMP 148


>sp|Y1033_PYRAR|UPF0210 protein Pars_1033|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VLDAMGVPK 9
VL+AMG+P+
Sbjct: 284 VLEAMGLPR 292


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 VLDAMGVPK 9
+LD +GVPK
Sbjct: 500 LLDLLGVPK 508


>sp|FEN_IGNH4|FLAP endonuclease 1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VLDAMGVP 8
+L+AMGVP
Sbjct: 142 LLEAMGVP 149


>sp|FEN_NANEQ|FLAP endonuclease 1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VLDAMGVP 8
+L+AMG+P
Sbjct: 139 LLEAMGIP 146


>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 1 VLDAMGVPK 9
+LD +G+P+
Sbjct: 244 ILDELGIPR 252


>sp|Y3581_PYRAE|UPF0210 protein PAE3581|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VLDAMGVPK 9
+L+AMG+P+
Sbjct: 284 ILEAMGLPR 292


>sp|FAU1_HALMA|PROBABLE ribonuclease FAU-1|Haloarcula marismortui (strain ATCC 43049

Query: 3 DAMGVPK 9
DA+GVPK
Sbjct: 360 DALGVPK 366


>sp|SYH_METHJ|HISTIDINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VLDAMGVP 8
+LDA G+P
Sbjct: 237 ILDASGIP 244


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VLDAMGVPKW 10
+LD M P+W
Sbjct: 143 ILDDMYKPRW 152


>sp|FEN_METST|FLAP endonuclease 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VLDAMGVP 8
+LD MG+P
Sbjct: 138 LLDLMGIP 145


>sp|FEN_METMA|FLAP endonuclease 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VLDAMGVP 8
+LD MG+P
Sbjct: 138 LLDIMGIP 145


>sp|FEN_THEAC|FLAP endonuclease 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VLDAMGVP 8
+LD MG+P
Sbjct: 137 LLDYMGIP 144


>sp|DEOC_METTH|DEOXYRIBOSE-PHOSPHATE aldolase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VLDAMGVP 8
V+DA GVP
Sbjct: 121 VVDAAGVP 128


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 VLDAMGVP 8
+LD++G+P
Sbjct: 662 LLDSLGIP 669


>sp|FEN_METKA|FLAP endonuclease 1|Methanopyrus kandleri (strain AV19 /

Query: 1 VLDAMGVP 8
+LD MG+P
Sbjct: 135 LLDLMGIP 142


>sp|THI4_HALVD|THIAMINE thiazole synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 VLDAMGVP 8
VLD +GVP
Sbjct: 89 VLDELGVP 96


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 VLDAMGVPK 9
VLD GVP+
Sbjct: 101 VLDRAGVPR 109


>sp|Y1656_ARCFU|UNCHARACTERIZED protein AF_1656|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VLDAMGVPK 9
++DA G+PK
Sbjct: 76 IVDAPGIPK 84


>sp|THI4_HALSA|THIAMINE thiazole synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VLDAMGVP 8
VLD +GVP
Sbjct: 89 VLDDLGVP 96


>sp|THI4_HALS3|THIAMINE thiazole synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VLDAMGVP 8
VLD +GVP
Sbjct: 89 VLDDLGVP 96


>sp|SYW_PYRAE|TRYPTOPHAN--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VLDAMGVPK 9
+ DA+G PK
Sbjct: 233 IADALGYPK 241


>sp|NADM_IGNH4|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LDAMGVPKW 10
L A+G PKW
Sbjct: 135 LMALGDPKW 143


>sp|IF2G_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 2 LDAMGVPK 9
LDA+GV K
Sbjct: 133 LDALGVEK 140


>sp|RS13_HYPBU|SMALL ribosomal subunit protein uS13|Hyperthermus butylicus (strain DSM

Query: 4 AMGVPKW 10
A+G+P W
Sbjct: 74 AIGIPVW 80


>sp|RS19E_METJA|SMALL ribosomal subunit protein eS19|Methanocaldococcus jannaschii

Query: 5 MGVPKW 10
+GVP+W
Sbjct: 25 IGVPEW 30


>sp|PTH_PYRAE|PEPTIDYL-TRNA hydrolase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VLDAMGVPKW 10
VL AMG KW
Sbjct: 32 VLAAMGDAKW 41


>sp|TRPD_HALSA|ANTHRANILATE phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 VLDAMGV 7
VLDA+GV
Sbjct: 121 VLDALGV 127


>sp|TRPD_HALS3|ANTHRANILATE phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 VLDAMGV 7
VLDA+GV
Sbjct: 121 VLDALGV 127


>sp|UBIX_AERPE|FLAVIN prenyltransferase UbiX|Aeropyrum pernix (strain ATCC 700893

Query: 1 VLDAMGV 7
VLDA+GV
Sbjct: 176 VLDALGV 182




172|SequenceR|865|856|VQEPTVLDAM

>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 1 VQEPTVLDAM 10
+ P+VLDAM
Sbjct: 54 ISPPSVLDAM 63


>sp|THRC_METAC|THREONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QEPTVLDA 9
+EPTV+DA
Sbjct: 384 EEPTVVDA 391


>sp|EF1A_METTP|ELONGATION factor 1-alpha|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 PTVLDAM 10
PTVLDA+
Sbjct: 207 PTVLDAL 213


>sp|CHEY_HALS3|CHEMOTAXIS protein CheY|Halobacterium salinarum (strain ATCC 29341

Query: 2 QEPTVLDAM 10
Q+P+V+DA+
Sbjct: 106 QKPSVMDAI 114


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PTVLDAM 10
PT+LDA+
Sbjct: 172 PTILDAL 178


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EPTVLDAM 10
EPT+ DA+
Sbjct: 247 EPTIYDAI 254


>sp|GYRA_HALL2|DNA gyrase subunit A|Haloferax lucentense (strain DSM 14919

Query: 2 QEPTVL 7
QEPTVL
Sbjct: 165 QEPTVL 170


>sp|EF1A_METMJ|ELONGATION factor 1-alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 PTVLDAM 10
PTVLDA+
Sbjct: 205 PTVLDAL 211


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VQEPTVLDAM 10
+ + TVLDAM
Sbjct: 174 IGDATVLDAM 183


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VQEPTVLDAM 10
+ + TVLDAM
Sbjct: 174 IGDATVLDAM 183


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 VQEPTVLDAM 10
+ + TVLDAM
Sbjct: 174 IGDATVLDAM 183


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VQEPTVLDAM 10
+ + TVLDAM
Sbjct: 174 IGDATVLDAM 183


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VQEPTVLDAM 10
+ + TVLDAM
Sbjct: 174 IGDATVLDAM 183


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VQEPTVLDAM 10
+ + TVLDAM
Sbjct: 174 IGDATVLDAM 183


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VQEPTVLDAM 10
+ + TVLDAM
Sbjct: 174 IGDATVLDAM 183


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VQEPTVLDAM 10
+ + TVLDAM
Sbjct: 174 IGDATVLDAM 183




173|SequenceR|870|861|RYVKKVQEPT

>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RYVKKVQEP 9
RY+KK+ +P
Sbjct: 374 RYIKKIPKP 382


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 VKKVQEPT 10
+KKV+EPT
Sbjct: 587 LKKVEEPT 594


>sp|COFC_METMA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RYVKKVQEP 9
RY+K+ +EP
Sbjct: 79 RYLKEAEEP 87


>sp|KTHY_NATPD|PROBABLE thymidylate kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 YVKKVQEP 9
YVK+V EP
Sbjct: 111 YVKRVHEP 118


>sp|RS3_METS3|SMALL ribosomal subunit protein uS3|Methanobrevibacter smithii (strain

Query: 2 YVKKVQEPT 10
Y+KK EP+
Sbjct: 149 YIKKCGEPS 157


>sp|DNAG_SACS2|DNA primase DnaG|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RYVKKVQE 8
+Y+KKVQE
Sbjct: 271 QYLKKVQE 278


>sp|RPO10_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermoplasma acidophilum (strain

Query: 1 RYVKKVQE 8
RY+K+V E
Sbjct: 20 RYIKRVNE 27


>sp|RS3_METTH|SMALL ribosomal subunit protein uS3|Methanothermobacter

Query: 2 YVKKVQEPT 10
Y+KK EP+
Sbjct: 149 YIKKCGEPS 157




174|SequenceR|875|866|VLVAKRYVKK

>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LVAKRYVKK 10
L AK Y+KK
Sbjct: 409 LTAKEYLKK 417


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VLVAKRYVKK 10
+L A+R++KK
Sbjct: 249 ILAARRFLKK 258


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VAKRYVKK 10
+A+R+VKK
Sbjct: 446 IARRFVKK 453




175|SequenceR|880|871|KDPHVVLVAK

>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 PHVVLVAK 10
PHV LVAK
Sbjct: 396 PHVELVAK 403


>sp|MIG_METTF|THYMINE/URACIL-DNA glycosylase|Methanothermobacter thermautotrophicus

Query: 1 KDPHVVLVAK 10
+DP+V+L+ +
Sbjct: 33 RDPYVILITE 42


>sp|AROA_PYRAB|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 KDPHVV 6
KDPHVV
Sbjct: 387 KDPHVV 392


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KDPHVVLVA 9
KDPH L+A
Sbjct: 305 KDPHAGLIA 313


>sp|EF2_PYRCJ|ELONGATION factor 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KDPHVVLVA 9
KDPH L+A
Sbjct: 305 KDPHAGLIA 313


>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 KDPHVVLVA 9
KDPH L+A
Sbjct: 305 KDPHAGLIA 313


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KDPHVVLVA 9
KDPH L+A
Sbjct: 305 KDPHAGLIA 313


>sp|SYH_THEKO|HISTIDINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PHVVLVAK 10
P+VVLV K
Sbjct: 393 PYVVLVGK 400


>sp|Y3527_METJA|UNCHARACTERIZED protein MJECL27|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KDPHVVLV 8
KDP+ VLV
Sbjct: 129 KDPYTVLV 136


>sp|MRE11_HALVD|DNA double-strand break repair protein|Haloferax volcanii (strain ATCC

Query: 1 KDPHVV 6
+DPHVV
Sbjct: 109 RDPHVV 114


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KDPHVVLVAK 10
+DP +VLV K
Sbjct: 833 RDPDLVLVVK 842


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 DPHVVLVA 9
DPH LVA
Sbjct: 304 DPHAGLVA 311


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 3 PHVVLVAK 10
PH+ LVAK
Sbjct: 397 PHLELVAK 404




176|SequenceR|885|876|PQGTAKDPHV

>sp|SYW_HYPBU|TRYPTOPHAN--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 PQGTAKDPHV 10
P G +DPH+
Sbjct: 214 PVGADQDPHI 223


>sp|SYW_METTH|TRYPTOPHAN--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PQGTAKDPHV 10
P G +DPH+
Sbjct: 208 PVGPDQDPHI 217


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PQGTAKDPHV 10
P G +DPH+
Sbjct: 200 PVGFDQDPHI 209


>sp|NRPR_METMP|GLOBAL nitrogen regulator NrpR|Methanococcus maripaludis (strain DSM 14266

Query: 2 QGTAKDPH 9
+GT+ DPH
Sbjct: 428 EGTSLDPH 435


>sp|AGOG_METKA|N-GLYCOSYLASE/DNA lyase|Methanopyrus kandleri (strain AV19 /

Query: 3 GTAKDPHV 10
GT++DP V
Sbjct: 215 GTSRDPEV 222


>sp|SYW_ARCFU|TRYPTOPHAN--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PQGTAKDPHV 10
P G +DPH+
Sbjct: 206 PVGADQDPHM 215


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PQGTAKDP 8
P+GT DP
Sbjct: 322 PEGTEYDP 329


>sp|ASPD_METBF|L-ASPARTATE dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PQGTAKDPHV 10
P G A PHV
Sbjct: 150 PMGLAGAPHV 159


>sp|SYW_AERPE|TRYPTOPHAN--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PQGTAKDPHV 10
P G +DPH+
Sbjct: 213 PVGADQDPHL 222


>sp|SYW1_HALSA|TRYPTOPHAN--TRNA ligase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 PQGTAKDPHV 10
P G +DPHV
Sbjct: 218 PVGPDQDPHV 227


>sp|SYW_THEAC|TRYPTOPHAN--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PQGTAKDPHV 10
P G +DPH+
Sbjct: 200 PVGFDQDPHL 209


>sp|RL1_NATPD|LARGE ribosomal subunit protein uL1|Natronomonas pharaonis (strain ATCC

Query: 1 PQGTAKDPHV 10
P GT +D H+
Sbjct: 50 PSGTGQDTHI 59


>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PQGTAKDPHV 10
P G +DPH+
Sbjct: 209 PVGPDQDPHL 218


>sp|NPD1_ARCFU|NAD-DEPENDENT protein deacylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PQGTAKDP 8
PQ AKDP
Sbjct: 50 PQAFAKDP 57


>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 PQGTAKDPHV 10
P G +DPH+
Sbjct: 208 PVGVDQDPHL 217


>sp|EF2_PYRWO|ELONGATION factor 2|Pyrococcus woesei

Query: 1 PQGTAKDP 8
P+G KDP
Sbjct: 508 PEGRVKDP 515


>sp|EF2_PYRFU|ELONGATION factor 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PQGTAKDP 8
P+G KDP
Sbjct: 508 PEGRVKDP 515


>sp|SYE_SACS2|GLUTAMATE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 TAKDPH 9
TAK+PH
Sbjct: 273 TAKNPH 278


>sp|SYW_METJA|TRYPTOPHAN--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GTAKDPHV 10
G +DPH+
Sbjct: 215 GIDQDPHI 222




177|SequenceR|890|881|AYQEYPQGTA

>sp|ASSY_NATPD|ARGININOSUCCINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AYQEYPQGTA 10
+YQ YP GTA
Sbjct: 83 SYQGYPLGTA 92


>sp|ASSY_HALSA|ARGININOSUCCINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 YQEYPQGTA 10
YQ YP GTA
Sbjct: 83 YQGYPLGTA 91


>sp|ASSY_HALWD|ARGININOSUCCINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 YQEYPQGTA 10
YQ YP GTA
Sbjct: 81 YQGYPLGTA 89


>sp|ASSY_HALMA|ARGININOSUCCINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 YQEYPQGTA 10
YQ YP GTA
Sbjct: 85 YQGYPLGTA 93


>sp|ECFA_METJA|ENERGY-COUPLING factor transporter ATP-binding protein|Methanocaldococcus

Query: 2 YQEYPQGTA 10
Y YP GTA
Sbjct: 10 YFRYPDGTA 18


>sp|HTPX1_SULAC|PROTEASE HtpX homolog 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AYQEYPQGTA 10
+Y+EYP A
Sbjct: 93 SYEEYPNAFA 102


>sp|CAS3_METJA|PUTATIVE CRISPR-associated nuclease/helicase Cas3|Methanocaldococcus

Query: 2 YQEYPQGT 9
YQ+Y +GT
Sbjct: 67 YQQYKKGT 74


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri

Query: 3 QEYPQGT 9
EYP GT
Sbjct: 3 HEYPDGT 9


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 1 AYQEYPQGT 9
AY EY +GT
Sbjct: 239 AYAEYARGT 247


>sp|PSB_META3|PROTEASOME subunit beta|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 YQEYPQGT 9
Y+EY +GT
Sbjct: 8 YKEYMKGT 15


>sp|ASSY_METHJ|ARGININOSUCCINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 YQEYPQGTA 10
Y+ YP GT+
Sbjct: 84 YEGYPMGTS 92


>sp|PIMT_METHJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 AYQEYP 6
AYQ+YP
Sbjct: 47 AYQDYP 52




178|SequenceR|895|886|MFIMKAYQEY

>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 FIMKAYQEY 10
FI+K Y+EY
Sbjct: 259 FIIKRYEEY 267


>sp|NDK_PYRAE|NUCLEOSIDE diphosphate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 IMKAYQE 9
++KAYQE
Sbjct: 65 LLKAYQE 71


>sp|VHCD_METVO|F420-NON-REDUCING hydrogenase vhc iron-sulfur subunit|Methanococcus voltae

Query: 2 FIMKAYQE 9
FI+KA++E
Sbjct: 51 FILKAFKE 58


>sp|RL10_SULTO|LARGE ribosomal subunit protein uL10|Sulfurisphaera tokodaii (strain DSM

Query: 3 IMKAYQ 8
IMKAYQ
Sbjct: 217 IMKAYQ 222


>sp|PRIS_THEKO|DNA primase small subunit PriS|Thermococcus kodakarensis (strain ATCC

Query: 3 IMKAYQEY 10
+ KAYQE+
Sbjct: 333 VQKAYQEW 340


>sp|RKD4_PYRCJ|ARCADIN-4 calidifontis (strain DSM 21063

Query: 3 IMKAYQEY 10
+ KAY+EY
Sbjct: 340 VKKAYEEY 347




179|SequenceR|900|891|ADNLEMFIMK

>sp|TRPD_METTH|ANTHRANILATE phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 1 ADNLEMFI 8
A+NLE+F+
Sbjct: 277 AENLELFM 284




180|SequenceR|905|896|EFESWADNLE

>sp|THI4_META3|THIAMINE thiazole synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FESWADNLE 10
+E W DNLE
Sbjct: 24 YEMWMDNLE 32


>sp|RL3_METJA|LARGE ribosomal subunit protein uL3|Methanocaldococcus jannaschii (strain

Query: 3 ESWADNLE 10
E WADNL+
Sbjct: 101 EVWADNLD 108


>sp|RL3_METLZ|LARGE ribosomal subunit protein uL3|Methanocorpusculum labreanum (strain

Query: 3 ESWADNLE 10
E WA+NLE
Sbjct: 99 EVWAENLE 106


>sp|PURA_METBU|ADENYLOSUCCINATE synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EFESWADNL 9
E E W+D+L
Sbjct: 372 ELEGWSDDL 380


>sp|RL3_THEAC|LARGE ribosomal subunit protein uL3|Thermoplasma acidophilum (strain ATCC

Query: 2 FESWADNLE 10
FE+WA +L+
Sbjct: 100 FEAWAKDLD 108


>sp|PURA_THEVO|ADENYLOSUCCINATE synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EFESWAD 7
EFE W D
Sbjct: 379 EFEGWGD 385


>sp|MTSA_METBA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina barkeri

Query: 4 SWADNLE 10
+W DNLE
Sbjct: 109 TWPDNLE 115


>sp|Y565_METJA|UNCHARACTERIZED protein MJ0565|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FESWAD 7
FE WAD
Sbjct: 110 FEDWAD 115


>sp|SYH_METLZ|HISTIDINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 FESWADNL 9
FE +ADNL
Sbjct: 263 FEGFADNL 270


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 EFESWADNL 9
EF+ WAD +
Sbjct: 42 EFKEWADKI 50


>sp|R15PI_PYRFU|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EFESWADNLE 10
E E+W N+E
Sbjct: 266 ELETWPKNIE 275


>sp|RL3_PICTO|LARGE ribosomal subunit protein uL3|Picrophilus torridus (strain ATCC

Query: 3 ESWADNLE 10
E WA+N++
Sbjct: 100 EEWAENID 107


>sp|COFH_META3|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus aeolicus (strain ATCC

Query: 1 EFESWADN 8
+F+S+ADN
Sbjct: 2 DFDSYADN 9


>sp|Y1477_METJA|UNCHARACTERIZED protein MJ1477|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EFESWADN 8
EFE WA+N
Sbjct: 194 EFEYWAEN 201


>sp|GVPC1_HALSA|GAS vesicle protein C1|Halobacterium salinarum (strain ATCC 700922

Query: 1 EFESWADNL 9
EFES+AD
Sbjct: 23 EFESYADEF 31


>sp|RL3_THEVO|LARGE ribosomal subunit protein uL3|Thermoplasma volcanium (strain ATCC

Query: 2 FESWADNLE 10
+E W NL+
Sbjct: 100 YEKWTQNLD 108


>sp|METK_METVS|S-ADENOSYLMETHIONINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 ESWADNLE 10
E W DN++
Sbjct: 383 EKWLDNIQ 390


>sp|MTTB_METBU|TRIMETHYLAMINE methyltransferase MttB|Methanococcoides burtonii (strain DSM 6242

Query: 5 WADNLE 10
WADN++
Sbjct: 143 WADNID 148


>sp|RS4E_NANEQ|SMALL ribosomal subunit protein eS4|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 ESWADNL 9
E+W DN+
Sbjct: 219 ETWLDNI 225


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 4 SWADNLE 10
+WADN E
Sbjct: 131 TWADNSE 137


>sp|RL3_METTP|LARGE ribosomal subunit protein uL3|Methanothrix thermoacetophila (strain

Query: 3 ESWADNL 9
E WA+NL
Sbjct: 99 ELWAENL 105


>sp|THI4_METVS|THIAMINE thiazole synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 FESWADNLE 10
FE W D +E
Sbjct: 21 FEMWMDLIE 29


>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 EFESWADNLE 10
E+E W +E
Sbjct: 444 EYEEWVKEME 453


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 4 SWADNLE 10
+WADN E
Sbjct: 131 TWADNSE 137


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 EFESWADNLE 10
E+E W +E
Sbjct: 444 EYEEWTKEME 453


>sp|TRM56_METJA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocaldococcus

Query: 3 ESWADNLE 10
ESW N E
Sbjct: 52 ESWGGNFE 59




181|SequenceR|913|901|YLPKQGQNEFESW

>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 3 PKQGQNEFESW 13
P++ Q EFE W
Sbjct: 605 PREEQAEFEDW 615


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 3 PKQGQNEFESW 13
P++ Q EFE W
Sbjct: 605 PREEQAEFEDW 615


>sp|RS8_THEPD|SMALL ribosomal subunit protein uS8|Thermofilum pendens (strain DSM

Query: 7 QNEFESW 13
+NEFE+W
Sbjct: 82 KNEFEAW 88


>sp|AROE_METAR|SHIKIMATE dehydrogenase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 2 LPKQGQNEFESW 13
L +QG FE W
Sbjct: 240 LARQGAKSFEIW 251


>sp|MOAA_METAC|PROBABLE GTP 3',8-cyclase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YLPKQGQNEFESW 13
Y+P G + E W
Sbjct: 320 YIPATGVTKLEKW 332


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YLPKQGQNEFES 12
YLP + NEF++
Sbjct: 280 YLPAKALNEFKA 291


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LPKQGQNEFESW 13
LPK + FE W
Sbjct: 762 LPKTAKRFFEEW 773


>sp|G3P_HYPBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Hyperthermus butylicus (strain DSM 5456

Query: 1 YLPKQGQNEFES 12
Y+PK+ EF++
Sbjct: 53 YVPKESLEEFQA 64


>sp|Y812_METTH|UPF0305 protein MTH_812|Methanothermobacter thermautotrophicus (strain

Query: 1 YLPKQGQNEF 10
YLP + Q EF
Sbjct: 35 YLPPREQKEF 44


>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KQGQNEFESW 13
K+ +EFE W
Sbjct: 179 KEHADEFEDW 188


>sp|RS8_HALLT|SMALL ribosomal subunit protein uS8|Halorubrum lacusprofundi (strain

Query: 6 GQNEFESW 13
G +EFE W
Sbjct: 82 GADEFEKW 89


>sp|HISX_SULTO|HISTIDINOL dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LPKQGQNEF 10
LPKQ N+F
Sbjct: 6 LPKQRPNDF 14


>sp|RS8_HALWD|SMALL ribosomal subunit protein uS8|Haloquadratum walsbyi (strain DSM

Query: 6 GQNEFESW 13
G +EFE W
Sbjct: 82 GADEFERW 89


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 2 LPKQGQNEFESW 13
+P+ G+N +W
Sbjct: 547 VPRMGKNHLRAW 558


>sp|RS8_NATPD|SMALL ribosomal subunit protein uS8|Natronomonas pharaonis (strain ATCC

Query: 6 GQNEFESW 13
G +EFE W
Sbjct: 82 GADEFEKW 89


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPKQGQNEFESW 13
LPK + FE W
Sbjct: 765 LPKTVERFFEEW 776


>sp|SPEE_PYRIL|POLYAMINE aminopropyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YLPKQGQNEFE 11
YLP+ Q FE
Sbjct: 123 YLPQMHQGVFE 133


>sp|FTSZ2_THEKO|CELL division protein FtsZ 2|Thermococcus kodakarensis (strain ATCC

Query: 3 PKQGQNEFE 11
PK G N FE
Sbjct: 371 PKAGFNSFE 379


>sp|RS8_HALMA|SMALL ribosomal subunit protein uS8|Haloarcula marismortui (strain ATCC

Query: 6 GQNEFESW 13
G +EFE W
Sbjct: 82 GADEFEKW 89


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 YLPKQGQNEF 10
YLP +N+F
Sbjct: 160 YLPATSENDF 169


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LPKQGQNEFESW 13
LPK + FE W
Sbjct: 762 LPKTVKRFFEEW 773


>sp|DNAJ_HALWD|CHAPERONE protein DnaJ|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PKQGQN 8
P+QGQN
Sbjct: 128 PRQGQN 133


>sp|Y1554_METJA|UNCHARACTERIZED protein MJ1554|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LPKQGQNEFESW 13
L K+ QN+FE++
Sbjct: 340 LMKKLQNDFENY 351


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 LPKQGQNEFESW 13
LPK + FE W
Sbjct: 762 LPKTVKRFFEEW 773


>sp|RPO3_PICTO|DNA-DIRECTED RNA polymerase subunit Rpo3|Picrophilus torridus (strain ATCC

Query: 4 KQGQNEFESW 13
K +NE E+W
Sbjct: 177 KINKNELENW 186


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 LPKQGQNEFESW 13
LPK + FE W
Sbjct: 762 LPKTVKRFFEEW 773


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 LPKQGQNEFESW 13
LPK + FE W
Sbjct: 762 LPKTVKRFFEEW 773


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 LPKQGQNEFESW 13
LPK + FE W
Sbjct: 771 LPKTVKRFFEEW 782


>sp|RS6E_SULTO|SMALL ribosomal subunit protein eS6|Sulfurisphaera tokodaii (strain DSM

Query: 4 KQGQNEFES 12
K G NEFE+
Sbjct: 101 KYGANEFEA 109


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LPKQGQNEFESW 13
LPK FE W
Sbjct: 780 LPKTVNRFFEEW 791


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LPKQGQNEFESW 13
+PK Q F W
Sbjct: 762 IPKTAQRFFNEW 773




THE END