AUXI_HUMAN Blast Output
Archaea
1|Sequence|1|10|MKDSENKGAS

>sp|CYSO_AERPE|PROTEIN CysO|Aeropyrum pernix (strain ATCC 700893

Query: 1 MKDSENKG 8
MKDS+N+G
Sbjct: 211 MKDSKNEG 218


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MKDSENKGA 9
+K++ENKG
Sbjct: 459 LKEAENKGV 467


>sp|HIS6_METHJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanospirillum hungatei JF-1

Query: 2 KDSENKGA 9
K++EN+GA
Sbjct: 175 KEAENRGA 182


>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 2 KDSENKGAS 10
KDSENK S
Sbjct: 345 KDSENKVLS 353




2|Sequence|6|15|NKGASSPDME

>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 KGASSPDM 9
KGA SPD+
Sbjct: 388 KGAVSPDL 395


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 2 KGASSPDME 10
+G+SS DME
Sbjct: 277 QGSSSKDME 285


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 NKGASSPDME 10
N+G SPD E
Sbjct: 673 NEGVPSPDEE 682




3|Sequence|11|20|SPDMEPSYGG

>sp|SUCC_DESA1|SUCCINATE--COA ligase [ADP-forming] subunit beta|Desulfurococcus amylolyticus

Query: 2 PDMEPSYG 9
PD++P YG
Sbjct: 220 PDLQPLYG 227


>sp|SYK_METMJ|LYSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SPDMEPSYGG 10
+P ++P YGG
Sbjct: 197 TPTLQPIYGG 206


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PDMEPSYGG 10
PD+EP GG
Sbjct: 194 PDLEPIAGG 202


>sp|SYK_METHJ|LYSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SPDMEPSYGG 10
+P ++P YGG
Sbjct: 197 TPTLQPLYGG 206


>sp|SYK_SULAC|LYSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SPDMEPSYGG 10
+P ++P YGG
Sbjct: 197 TPILQPVYGG 206


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 MEPSYG 9
+EPSYG
Sbjct: 445 IEPSYG 450


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 MEPSYG 9
+EPSYG
Sbjct: 446 IEPSYG 451


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 4 MEPSYG 9
+EPSYG
Sbjct: 445 IEPSYG 450


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 4 MEPSYG 9
+EPSYG
Sbjct: 445 IEPSYG 450


>sp|YA00_METTH|UPF0146 protein MTH_1000|Methanothermobacter thermautotrophicus (strain

Query: 3 DMEPSYGG 10
D++PS+GG
Sbjct: 46 DIKPSHGG 53


>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 MEPSYG 9
+EPSYG
Sbjct: 445 IEPSYG 450


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 4 MEPSYG 9
+EPSYG
Sbjct: 445 IEPSYG 450


>sp|NRPR1_METMA|GLOBAL nitrogen regulator NrpRI|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 MEPSYGG 10
+EP+YGG
Sbjct: 181 VEPAYGG 187


>sp|RPO3_METKA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanopyrus kandleri (strain AV19 /

Query: 2 PDMEPSY 8
PD+EP++
Sbjct: 121 PDVEPAF 127


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 5 EPSYGG 10
+PSYGG
Sbjct: 414 KPSYGG 419


>sp|RS3_METM6|SMALL ribosomal subunit protein uS3|Methanococcus maripaludis (strain

Query: 1 SPDMEPSYGG 10
SPD++P+ G
Sbjct: 86 SPDLDPAIVG 95


>sp|RS3_METM7|SMALL ribosomal subunit protein uS3|Methanococcus maripaludis (strain

Query: 1 SPDMEPSYGG 10
SPD++P+ G
Sbjct: 86 SPDLDPAIVG 95


>sp|HMDY_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 5 EPSYGG 10
EP YGG
Sbjct: 38 EPPYGG 43


>sp|Y1111_HALSA|UNCHARACTERIZED GTP-binding protein VNG_1111G|Halobacterium salinarum (strain ATCC

Query: 4 MEPSYGG 10
+EPSY G
Sbjct: 248 IEPSYAG 254


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 2 PDMEPSYGG 10
PD++ YGG
Sbjct: 101 PDVDIDYGG 109


>sp|RS24_METST|SMALL ribosomal subunit protein eS24|Methanosphaera stadtmanae (strain

Query: 4 MEPSYG 9
M+PSYG
Sbjct: 56 MKPSYG 61


>sp|HMDX_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 5 EPSYGG 10
EP YGG
Sbjct: 27 EPPYGG 32


>sp|TRPB_DESA1|TRYPTOPHAN synthase beta chain|Desulfurococcus amylolyticus (strain DSM

Query: 1 SPDMEPSY 8
+PD+ PSY
Sbjct: 8 TPDILPSY 15


>sp|SYFB_METPE|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaerula palustris (strain ATCC

Query: 1 SPDMEPS 7
SPD+ PS
Sbjct: 263 SPDLSPS 269


>sp|BRIX_METAC|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina

Query: 2 PDMEPSYGG 10
PD+EP G
Sbjct: 90 PDLEPVLAG 98


>sp|Y1039_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 1 SPDMEPSYGG 10
+PD++ S GG
Sbjct: 377 APDLDDSVGG 386


>sp|FLPA_METTP|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanothrix thermoacetophila

Query: 2 PDMEPSYG 9
P EP YG
Sbjct: 21 PSQEPLYG 28




4|Sequence|16|25|PSYGGGLFDM

>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 1 PSYGGGLFDM 10
P+YGG LF++
Sbjct: 414 PAYGGALFEL 423


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 1 PSYGGGLFDM 10
P YGG +F+M
Sbjct: 414 PHYGGAIFEM 423


>sp|SFSA_PYRNV|SUGAR fermentation stimulation protein homolog|Pyrobaculum neutrophilum

Query: 1 PSYGGGLFDM 10
P+YG G FD+
Sbjct: 110 PAYGKGRFDL 119


>sp|SFSA_PYRCJ|SUGAR fermentation stimulation protein homolog|Pyrobaculum calidifontis

Query: 1 PSYGGGLFDM 10
PSYG G FD+
Sbjct: 107 PSYGRGRFDL 116


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 1 PSYGGGLFDM 10
P YGG +F++
Sbjct: 414 PHYGGSIFEL 423


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 1 PSYGGGLFDM 10
P YGG +F++
Sbjct: 414 PHYGGSIFEL 423


>sp|METK_THEVO|S-ADENOSYLMETHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PSYGGGL 7
P YGGGL
Sbjct: 74 PKYGGGL 80


>sp|METK_THEAC|S-ADENOSYLMETHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PSYGGGL 7
P YGGGL
Sbjct: 74 PKYGGGL 80


>sp|AOCD_METJA|ORNITHINE cyclodeaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PSYGGGLFD 9
P GGGLF+
Sbjct: 162 PREGGGLFE 170


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 1 PSYGGGLFD 9
PSYGG L +
Sbjct: 415 PSYGGSLVE 423


>sp|RS3A_PYRIL|SMALL ribosomal subunit protein eS1|Pyrobaculum islandicum (strain DSM

Query: 1 PSYGGGLF 8
PSY GG+F
Sbjct: 33 PSYLGGVF 40


>sp|RS3A_PYRAE|SMALL ribosomal subunit protein eS1|Pyrobaculum aerophilum (strain ATCC

Query: 1 PSYGGGLF 8
PSY GG+F
Sbjct: 33 PSYLGGVF 40


>sp|SFSA_PYRIL|SUGAR fermentation stimulation protein homolog|Pyrobaculum islandicum

Query: 1 PSYGGGLFDM 10
P++G G FD+
Sbjct: 107 PAFGKGRFDL 116


>sp|METK_HALMA|S-ADENOSYLMETHIONINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PSYGGG 6
P+YGGG
Sbjct: 75 PAYGGG 80


>sp|Y1517_METJA|UNCHARACTERIZED protein MJ1517|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GGGLFDM 10
GGG+FD+
Sbjct: 187 GGGVFDL 193


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 1 PSYGGGLFD 9
P YG G+F+
Sbjct: 346 PQYGYGIFE 354


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PSYGGGLFD 9
P +GGG+++
Sbjct: 281 PVHGGGMYE 289


>sp|SFSA_PYRAE|SUGAR fermentation stimulation protein homolog|Pyrobaculum aerophilum

Query: 1 PSYGGGLFDM 10
P++G G FD+
Sbjct: 113 PAFGRGRFDL 122


>sp|SFSA_CALMQ|SUGAR fermentation stimulation protein homolog|Caldivirga maquilingensis

Query: 1 PSYGGGLFDM 10
P + GG FD+
Sbjct: 108 PRFSGGRFDL 117


>sp|SFSA_PYRAR|SUGAR fermentation stimulation protein homolog|Pyrobaculum arsenaticum

Query: 1 PSYGGGLFDM 10
P++G G FD+
Sbjct: 107 PAFGKGRFDL 116


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 1 PSYGGGLF 8
P YGGG
Sbjct: 129 PDYGGGFL 136


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 4 GGGLFD 9
GGG+FD
Sbjct: 226 GGGVFD 231


>sp|GGGPS_HALMA|GERANYLGERANYLGLYCERYL phosphate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 YGGGLFD 9
YGGG+ D
Sbjct: 188 YGGGIHD 194


>sp|RNZ_NANEQ|RIBONUCLEASE Z|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PSYGGGLFDM 10
P Y G LF++
Sbjct: 264 PRYQGSLFEI 273


>sp|DNAK_METTH|CHAPERONE protein DnaK|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 YGGGLFDM 10
+GGG+F++
Sbjct: 190 FGGGVFEV 197


>sp|Y1398_METMP|UNCHARACTERIZED metallohydrolase MMP1398|Methanococcus maripaludis (strain DSM

Query: 2 SYGGGLFD 9
S+G GL+D
Sbjct: 230 SFGKGLYD 237


>sp|CYAS_METB6|CYSTEATE synthase|Methanoregula boonei (strain DSM 21154

Query: 4 GGGLFD 9
GGGLFD
Sbjct: 313 GGGLFD 318


>sp|Y1851_PYRFU|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus furiosus

Query: 2 SYGGGLFDM 10
S+ GG FD+
Sbjct: 25 SFRGGCFDL 33


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 SYGGGLFDM 10
S GG +FD+
Sbjct: 173 SLGGNVFDL 181


>sp|DNAK_NATPD|CHAPERONE protein DnaK|Natronomonas pharaonis (strain ATCC 35678

Query: 4 GGGLFDM 10
GGG FD+
Sbjct: 174 GGGTFDV 180


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 4 GGGLFDM 10
GGG FD+
Sbjct: 173 GGGTFDV 179


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 4 GGGLFDM 10
GGG FD+
Sbjct: 173 GGGTFDV 179


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GGGLFDM 10
GGG FD+
Sbjct: 173 GGGTFDV 179


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GGGLFDM 10
GGG FD+
Sbjct: 173 GGGTFDV 179


>sp|DNAK_HALWD|CHAPERONE protein DnaK|Haloquadratum walsbyi (strain DSM 16790

Query: 4 GGGLFDM 10
GGG FD+
Sbjct: 174 GGGTFDV 180


>sp|DNAK_HALSA|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 700922

Query: 4 GGGLFDM 10
GGG FD+
Sbjct: 173 GGGTFDV 179


>sp|DNAK_HALS3|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 29341

Query: 4 GGGLFDM 10
GGG FD+
Sbjct: 173 GGGTFDV 179


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 4 GGGLFDM 10
GGG FD+
Sbjct: 173 GGGTFDV 179


>sp|DNAK_HALLT|CHAPERONE protein DnaK|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 GGGLFDM 10
GGG FD+
Sbjct: 174 GGGTFDV 180


>sp|DNAK_METBU|CHAPERONE protein DnaK|Methanococcoides burtonii (strain DSM 6242

Query: 4 GGGLFDM 10
GGG FD+
Sbjct: 173 GGGTFDV 179


>sp|DNAK_HALMT|CHAPERONE protein DnaK|Haloferax mediterranei (strain ATCC 33500

Query: 4 GGGLFDM 10
GGG FD+
Sbjct: 174 GGGTFDV 180


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 4 GGGLFDM 10
GGG FD+
Sbjct: 173 GGGTFDV 179


>sp|Y1033_SACS2|KELCH domain-containing protein SSO1033|Saccharolobus solfataricus

Query: 1 PSYGGG 6
P+YGGG
Sbjct: 188 PTYGGG 193


>sp|GGGPS_NATPD|GERANYLGERANYLGLYCERYL phosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 YGGGLFD 9
YGGG+ D
Sbjct: 189 YGGGIRD 195




5|Sequence|21|30|GLFDMVKGGA

>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 3 FDMVKG 8
FDMVKG
Sbjct: 149 FDMVKG 154


>sp|AATB_THEPD|A-TYPE ATP synthase subunit B|Thermofilum pendens (strain DSM 2475

Query: 1 GLFDMVKG 8
GLF MV+G
Sbjct: 138 GLFSMVRG 145


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GLFDMVKGG 9
GLF + KGG
Sbjct: 223 GLFPIAKGG 231


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 1 GLFDMVKGG 9
GLF + KGG
Sbjct: 223 GLFPIAKGG 231


>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GLFDMVKGG 9
GLF + KGG
Sbjct: 223 GLFPIAKGG 231


>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 1 GLFDMVKGG 9
GLF + KGG
Sbjct: 224 GLFPIAKGG 232


>sp|AATA_HALSA|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 700922

Query: 1 GLFDMVKGG 9
GLF + KGG
Sbjct: 221 GLFPIAKGG 229


>sp|AATA_HALS3|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 29341

Query: 1 GLFDMVKGG 9
GLF + KGG
Sbjct: 221 GLFPIAKGG 229


>sp|AATA_HALMA|A-TYPE ATP synthase subunit A|Haloarcula marismortui (strain ATCC 43049

Query: 1 GLFDMVKGG 9
GLF + KGG
Sbjct: 224 GLFPIAKGG 232


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 1 GLFDMVKGG 9
GLF + KGG
Sbjct: 215 GLFPIAKGG 223


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 1 GLFDMVKGG 9
GLF + KGG
Sbjct: 218 GLFPIAKGG 226


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GLFDMVKGG 9
GLF + KGG
Sbjct: 217 GLFPVAKGG 225


>sp|AATA_METMJ|A-TYPE ATP synthase subunit A|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GLFDMVKGG 9
GLF + KGG
Sbjct: 220 GLFPIAKGG 228


>sp|DTDA_METPE|D-AMINOACYL-TRNA deacylase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GLFDMVKGG 9
LF M+KGG
Sbjct: 395 ALFGMLKGG 403


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 1 GLFDMVKGG 9
GLF + KGG
Sbjct: 214 GLFPVAKGG 222


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 GLFDMVKGG 9
GLF + KGG
Sbjct: 214 GLFPVAKGG 222


>sp|Y2181_ARCFU|UNCHARACTERIZED protein AF_2181|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DMVKGGA 10
DMVK GA
Sbjct: 128 DMVKAGA 134


>sp|Y1436_METJA|UNCHARACTERIZED protein MJ1436|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLFDMVK 7
GLF MVK
Sbjct: 82 GLFQMVK 88


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GLFDMVKGG 9
GLF + KGG
Sbjct: 214 GLFPVAKGG 222


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 GLFDMVKGG 9
GLF + KGG
Sbjct: 214 GLFPVAKGG 222


>sp|PCNA_METJA|DNA polymerase sliding clamp|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LFDMVKG 8
L DMVKG
Sbjct: 203 LMDMVKG 209


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LFDMVKGG 9
+F +VKGG
Sbjct: 214 MFPLVKGG 221


>sp|GLYA_METTP|SERINE hydroxymethyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 3 FDMVKGG 9
FD+V GG
Sbjct: 301 FDLVSGG 307


>sp|SAHH_PYRAE|ADENOSYLHOMOCYSTEINASE aerophilum (strain ATCC 51768

Query: 1 GLFDMVKGG 9
GLF ++GG
Sbjct: 159 GLFSRIRGG 167


>sp|IF2P_METBU|PROBABLE translation initiation factor IF-2|Methanococcoides burtonii

Query: 2 LFDMVKGGA 10
L DM++G A
Sbjct: 25 LLDMIRGSA 33


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 1 GLFDMVKGG 9
G+F + KGG
Sbjct: 214 GMFPIAKGG 222


>sp|PYRH_THEKO|URIDYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LFDMVKG 8
LFD++KG
Sbjct: 210 LFDVIKG 216


>sp|RL19E_NATPD|LARGE ribosomal subunit protein eL19|Natronomonas pharaonis (strain ATCC

Query: 2 LFDMVKGG 9
L+DM GG
Sbjct: 123 LYDMASGG 130


>sp|PYRH_PYRHO|URIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LFDMVKG 8
LFD++KG
Sbjct: 210 LFDVIKG 216


>sp|RL18_SULAC|LARGE ribosomal subunit protein uL18|Sulfolobus acidocaldarius (strain

Query: 1 GLFDMVKGG 9
GLF VKGG
Sbjct: 107 GLFVPVKGG 115


>sp|RF1_HALVD|PEPTIDE chain release factor subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 GLFDMVKGG 9
GL+D+V G
Sbjct: 264 GLYDLVDAG 272


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 1 GLFDMVKGG 9
G F + KGG
Sbjct: 214 GFFPLAKGG 222


>sp|PYRH_THEON|URIDYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 2 LFDMVKG 8
LFD++KG
Sbjct: 210 LFDVIKG 216


>sp|CDPAS_METST|CDP-ARCHAEOL synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GLFDMVKGG 9
GLF MV GG
Sbjct: 59 GLFGMVIGG 67




6|Sequence|26|35|VKGGAGRLFS

>sp|TRMY_HALVD|TRNA (pseudouridine(54)-N(1))-methyltransferase|Haloferax volcanii

Query: 1 VKGGAGRL 8
+ GGAGRL
Sbjct: 22 IAGGAGRL 29


>sp|PSA2_HALVD|PROTEASOME subunit alpha 2|Haloferax volcanii (strain ATCC 29605

Query: 1 VKGGAGRLFS 10
V+ G+GRLF+
Sbjct: 142 VENGSGRLFA 151


>sp|NIKR_THEON|PUTATIVE nickel-responsive regulator|Thermococcus onnurineus (strain NA1)

Query: 1 VKGGAGRL 8
VKG AGR+
Sbjct: 103 VKGKAGRI 110


>sp|LYSY_PYRFU|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 VKGGAGR 7
+KGGAG+
Sbjct: 299 IKGGAGQ 305


>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 4 GAGRLFS 10
GAG LFS
Sbjct: 501 GAGHLFS 507


>sp|LYSY_PYRHO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 VKGGAGR 7
+KGGAG+
Sbjct: 299 IKGGAGQ 305




7|Sequence|31|40|GRLFSNLKDN

>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 1 GRLFSNLKDN 10
GRL S L+D+
Sbjct: 150 GRLVSTLRDH 159


>sp|THSB_DESM0|CHAPERONIN subunit beta|Desulfurococcus mucosus (strain ATCC 35584

Query: 1 GRLFSNLKD 9
GR+ SN++D
Sbjct: 331 GRIVSNIED 339


>sp|Y149_METJA|UNCHARACTERIZED protein MJ0149|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GRLFSNLKD 9
GRLF +KD
Sbjct: 46 GRLFKMIKD 54


>sp|GLYA_CENSY|SERINE hydroxymethyltransferase|Cenarchaeum symbiosum (strain A)

Query: 1 GRLFSNLKDN 10
GR+F+ L+D+
Sbjct: 12 GRIFTLLRDH 21


>sp|YNI3_METTL|UNCHARACTERIZED protein in nifH1 5'region|Methanothermococcus

Query: 4 FSNLKDN 10
+SNL+DN
Sbjct: 62 YSNLRDN 68


>sp|Y1615_METJA|CHEF taxis protein family member|Methanocaldococcus jannaschii (strain

Query: 3 LFSNLKD 9
+FSN+KD
Sbjct: 183 IFSNIKD 189


>sp|ARLY_METM6|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C6 /

Query: 1 GRLFSNLKDN 10
GRL SN+K++
Sbjct: 7 GRLGSNVKED 16


>sp|ARLY_METM5|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C5 /

Query: 1 GRLFSNLKDN 10
GRL SN+K++
Sbjct: 7 GRLGSNVKED 16


>sp|ARLY_METMP|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GRLFSNLKDN 10
GRL SN+K++
Sbjct: 7 GRLGSNVKED 16


>sp|ARLY_METM7|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C7 /

Query: 1 GRLFSNLKDN 10
GRL SN+K++
Sbjct: 7 GRLGSNVKED 16




8|Sequence|36|45|NLKDNLKDTL

>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 1 NLKDNLKDTL 10
NLKD LK+T+
Sbjct: 659 NLKDELKNTI 668


Query: 2 LKDNLKDTL 10
LK+NLKD +
Sbjct: 243 LKENLKDII 251


>sp|Y1033_PYRAR|UPF0210 protein Pars_1033|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LKDNLKDTL 10
++ NLKDTL
Sbjct: 35 IRPNLKDTL 43


>sp|ASPD_METBU|L-ASPARTATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 1 NLKDNLKDT 9
NLK+ LK+T
Sbjct: 42 NLKEQLKNT 50


>sp|T1M1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 1 NLKDNLKD 8
NL DNLKD
Sbjct: 182 NLNDNLKD 189


>sp|METK_THEVO|S-ADENOSYLMETHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NLKDNLKD 8
NLKD LKD
Sbjct: 226 NLKDQLKD 233


>sp|Y557_PICTO|PUTATIVE HTH-type transcriptional regulatory protein|Picrophilus torridus

Query: 1 NLKDNLKDTL 10
N+KD++KD
Sbjct: 196 NIKDDIKDVF 205


>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 LKDNLKD 8
L+DN+KD
Sbjct: 377 LEDNMKD 383


>sp|Y1074_METJA|UNCHARACTERIZED protein MJ1074|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NLKDNLKDTL 10
LKD LKD L
Sbjct: 43 ELKDELKDEL 52


>sp|GMS_METOI|GMGT synthase|Methanothermococcus okinawensis (strain DSM 14208

Query: 1 NLKDNLKDTL 10
N KD LKD L
Sbjct: 77 NFKDFLKDPL 86


>sp|DNLI_NANEQ|DNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 LKDNLKDTL 10
LKD K+TL
Sbjct: 33 LKDQYKETL 41




9|Sequence|41|50|LKDTLKDTSS

>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 1 LKDTLKDT 8
L+DTL+DT
Sbjct: 963 LRDTLEDT 970


>sp|PDXS_METS5|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Metallosphaera sedula (strain

Query: 1 LKDTLKDT 8
L+DT+KD+
Sbjct: 21 LRDTVKDS 28


>sp|Y1064_METJA|UNCHARACTERIZED acetyltransferase MJ1064|Methanocaldococcus jannaschii (strain

Query: 1 LKDTLKD 7
LK+TLKD
Sbjct: 7 LKNTLKD 13


>sp|G3PP_PYRHO|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LKDTLKDTS 9
L DTL DTS
Sbjct: 9 LDDTLVDTS 17


>sp|G3PP_PYRFU|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LKDTLKDTS 9
L DTL DTS
Sbjct: 11 LDDTLVDTS 19


>sp|Y809_METJA|ACYLPHOSPHATASE-LIKE protein MJ0809|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKDTLKDTS 9
+KDTLKD
Sbjct: 156 IKDTLKDIK 164




10|Sequence|46|55|KDTSSRVIQS

***** No hits found ******


11|Sequence|51|60|RVIQSVTSYT

***** No hits found ******


12|Sequence|56|65|VTSYTKGDLD

>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC

Query: 1 VTSYTKGDL 9
V Y+KGDL
Sbjct: 81 VVGYSKGDL 89


>sp|PYRB_AERPE|ASPARTATE carbamoyltransferase catalytic subunit|Aeropyrum pernix (strain

Query: 1 VTSYTKGDLD 10
+T +T+GDL+
Sbjct: 14 ITDFTRGDLE 23


>sp|ADH_SULSR|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus sp. (strain RC3)

Query: 1 VTSYTKGDL 9
V Y+KGDL
Sbjct: 81 VVGYSKGDL 89


>sp|ADH_SULTO|NAD-DEPENDENT alcohol dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VTSYTKGDL 9
V Y+KGDL
Sbjct: 81 VVGYSKGDL 89


>sp|PHOU2_METTH|PHOSPHATE-SPECIFIC transport system accessory protein|Methanothermobacter

Query: 1 VTSYTKGD 8
V+SY KGD
Sbjct: 35 VSSYIKGD 42


>sp|Y047_METJA|PROBABLE RNase MJ4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SYTKGDLD 10
SYTK D+D
Sbjct: 180 SYTKDDID 187


>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 SYTKGDL 9
SY KGDL
Sbjct: 134 SYKKGDL 140


>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VTSYTKGDLD 10
+ S+T+G+LD
Sbjct: 57 IMSHTRGELD 66


>sp|RS5_HYPBU|SMALL ribosomal subunit protein uS5|Hyperthermus butylicus (strain DSM

Query: 1 VTSYTKGD 8
V S+TKGD
Sbjct: 176 VWSFTKGD 183


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VTSYTKGDL 9
V+ YT+GD+
Sbjct: 1606 VSLYTQGDI 1614


>sp|HPRT_METHJ|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 VTSYTKGDL 9
VT Y+KG++
Sbjct: 99 VTGYSKGEM 107


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VTSYTKGDLD 10
VT+Y + D+D
Sbjct: 199 VTAYEREDMD 208


>sp|PCNA_METVS|DNA polymerase sliding clamp|Methanococcus vannielii (strain ATCC 35089

Query: 4 YTKGDLD 10
Y+KGDL+
Sbjct: 165 YSKGDLN 171


>sp|IF1A_METMP|TRANSLATION initiation factor 1A|Methanococcus maripaludis (strain DSM 14266

Query: 4 YTKGDLD 10
YTKG +D
Sbjct: 86 YTKGQVD 92


>sp|IF1A_METM7|TRANSLATION initiation factor 1A|Methanococcus maripaludis (strain C7 /

Query: 4 YTKGDLD 10
YTKG +D
Sbjct: 86 YTKGQVD 92


>sp|IF1A_METM6|TRANSLATION initiation factor 1A|Methanococcus maripaludis (strain C6 /

Query: 4 YTKGDLD 10
YTKG +D
Sbjct: 86 YTKGQVD 92


>sp|IF1A_METM5|TRANSLATION initiation factor 1A|Methanococcus maripaludis (strain C5 /

Query: 4 YTKGDLD 10
YTKG +D
Sbjct: 85 YTKGQVD 91


>sp|MPTE_METTH|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 1 VTSYTKGDLD 10
VT Y++ D+D
Sbjct: 188 VTRYSRPDMD 197


>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VTSYTKGDLD 10
+ ++T+G+LD
Sbjct: 57 IMTHTRGELD 66


>sp|PCNA_METM5|DNA polymerase sliding clamp|Methanococcus maripaludis (strain C5 /

Query: 4 YTKGDLD 10
Y+KGDL+
Sbjct: 165 YSKGDLN 171


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 3 SYTKGDLD 10
+Y KGD D
Sbjct: 390 AYEKGDFD 397


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 TSYTKGDL 9
TSY +GD+
Sbjct: 2563 TSYARGDV 2570


>sp|DAPA_METPE|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 SYTKGDLD 10
+YT+GD D
Sbjct: 222 AYTEGDWD 229


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 2 TSYTKGDLD 10
T YT+ DL+
Sbjct: 409 TPYTRADLE 417




13|Sequence|61|70|KGDLDFTYVT

>sp|Y1402_METJA|UNCHARACTERIZED protein MJ1402|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KGDLDFTYVT 10
+GDLD TY T
Sbjct: 75 EGDLDLTYPT 84


>sp|TRPD_PYRFU|ANTHRANILATE phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KGDLDFTYVT 10
+GD+DF VT
Sbjct: 230 RGDIDFYTVT 239


>sp|SPEE_PYRFU|POLYAMINE aminopropyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KGDLDFTYV 9
KGD+DFT +
Sbjct: 238 KGDIDFTKI 246


>sp|SPEE_THEKO|POLYAMINE aminopropyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 KGDLDFTYV 9
KGD+DFT +
Sbjct: 245 KGDVDFTRI 253


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 1 KGDLDFTYVT 10
KGDL Y+T
Sbjct: 384 KGDLKVLYIT 393


>sp|GGR2_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanococcoides burtonii (strain DSM 6242

Query: 1 KGDLDFTY 8
KG++DF Y
Sbjct: 397 KGEIDFKY 404


>sp|THIL_ARCFU|THIAMINE-MONOPHOSPHATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GDLDFTYVT 10
GD+DF+ +T
Sbjct: 120 GDIDFSEIT 128


>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GDLDFTYV 9
G LDF YV
Sbjct: 561 GRLDFVYV 568


>sp|Y604_METJA|PUTATIVE protein adenylyltransferase MJ0604|Methanocaldococcus jannaschii

Query: 2 GDLDFTYV 9
GD+DF YV
Sbjct: 48 GDVDFDYV 55


>sp|TRMJ_METJA|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Methanocaldococcus

Query: 2 GDLDFTYVT 10
GDLDF T
Sbjct: 71 GDLDFVIAT 79


>sp|SPEE_PYRAB|POLYAMINE aminopropyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 KGDLDF 6
KGDLDF
Sbjct: 237 KGDLDF 242


>sp|PYRB_HYPBU|ASPARTATE carbamoyltransferase catalytic subunit|Hyperthermus butylicus

Query: 2 GDLDFTYVT 10
G+LD YVT
Sbjct: 225 GELDVLYVT 233


>sp|PYRB_PYRHO|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus horikoshii

Query: 2 GDLDFTYVT 10
G+LD YVT
Sbjct: 220 GELDVLYVT 228


>sp|PYRB_PYRFU|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus furiosus (strain

Query: 2 GDLDFTYVT 10
G+LD YVT
Sbjct: 220 GELDVLYVT 228


>sp|PYRB_THEPD|ASPARTATE carbamoyltransferase catalytic subunit|Thermofilum pendens (strain

Query: 2 GDLDFTYVT 10
G+LD YVT
Sbjct: 228 GELDVLYVT 236


>sp|AROC_METMA|CHORISMATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GDLDFTYV 9
G DFTY+
Sbjct: 105 GHADFTYI 112


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 1 KGDLDFTY 8
KGD +F Y
Sbjct: 342 KGDYNFVY 349


>sp|PYRB_AERPE|ASPARTATE carbamoyltransferase catalytic subunit|Aeropyrum pernix (strain

Query: 2 GDLDFTYVT 10
G+LD YVT
Sbjct: 220 GELDVLYVT 228


>sp|PYRB_METKA|ASPARTATE carbamoyltransferase catalytic subunit|Methanopyrus kandleri

Query: 3 DLDFTYVT 10
DLD YVT
Sbjct: 221 DLDVLYVT 228


>sp|PYRB_METHJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanospirillum hungatei

Query: 3 DLDFTYVT 10
DLD YVT
Sbjct: 213 DLDVLYVT 220


>sp|ANTRP_HALVD|PROBABLE anion ABC transporter permease|Haloferax volcanii (strain ATCC

Query: 2 GDLDFTYV 9
GDL+ TY+
Sbjct: 5 GDLNLTYL 12


>sp|RRP4_PYRAE|EXOSOME complex component Rrp4|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KGDLDFTYVT 10
KGDL YVT
Sbjct: 62 KGDLVIGYVT 71


>sp|PYRB_METS5|ASPARTATE carbamoyltransferase catalytic subunit|Metallosphaera sedula

Query: 2 GDLDFTYVT 10
G+LD YVT
Sbjct: 210 GELDVLYVT 218


>sp|PYRB_HALLT|ASPARTATE carbamoyltransferase catalytic subunit|Halorubrum lacusprofundi

Query: 2 GDLDFTYVT 10
G+LD YVT
Sbjct: 215 GELDVLYVT 223


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 1 KGDLDFTYVT 10
KGD++ Y T
Sbjct: 714 KGDVEVAYAT 723


>sp|NADK_SACS2|NAD kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DLDFTYV 9
D+DF YV
Sbjct: 33 DIDFDYV 39




14|Sequence|66|75|FTYVTSRIIV

>sp|LYSY_SULTO|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 TYVTSR 7
TYVTSR
Sbjct: 30 TYVTSR 35


>sp|NEP1_ARCFU|RIBOSOMAL RNA small subunit methyltransferase|Archaeoglobus fulgidus (strain

Query: 3 YVTSRII 9
YVTSR++
Sbjct: 201 YVTSRVL 207




15|Sequence|71|80|SRIIVMSFPL

***** No hits found ******


16|Sequence|76|85|MSFPLDNVDI

>sp|MOAC_SACS2|PROBABLE cyclic pyranopterin monophosphate synthase|Saccharolobus

Query: 4 PLDNVDI 10
PL+NVDI
Sbjct: 72 PLENVDI 78


>sp|MFNA_METST|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaera stadtmanae

Query: 1 MSFPLDNVDI 10
+SF +DN+D+
Sbjct: 329 ISFKVDNIDV 338


>sp|DHYS_PYRAE|PROBABLE deoxyhypusine synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 SFPLDNVDI 10
SF LD+VD+
Sbjct: 88 SFDLDDVDL 96


>sp|FEN_PYRNV|FLAP endonuclease 1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 MSFPLDNVDI 10
+SFP+D ++I
Sbjct: 274 VSFPVDPLEI 283


>sp|PYRB_METMJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanoculleus marisnigri

Query: 2 SFPLDNVDI 10
S P+D +D+
Sbjct: 142 SMPVDGIDV 150




17|Sequence|81|90|DNVDIGFRNQ

>sp|KAE1_SACS2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 1 DNVDIGFRN 9
D VDI +RN
Sbjct: 323 DEVDIPWRN 331


>sp|KAE1_SACI7|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 1 DNVDIGFRN 9
D VDI +RN
Sbjct: 323 DEVDIPWRN 331


>sp|KAE1_SACI6|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 1 DNVDIGFRN 9
D VDI +RN
Sbjct: 323 DEVDIPWRN 331


>sp|KAE1_SACI4|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 1 DNVDIGFRN 9
D VDI +RN
Sbjct: 323 DEVDIPWRN 331


>sp|KAE1_SACI3|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 1 DNVDIGFRN 9
D VDI +RN
Sbjct: 323 DEVDIPWRN 331


>sp|KAE1_SACI2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 1 DNVDIGFRN 9
D VDI +RN
Sbjct: 323 DEVDIPWRN 331


>sp|KAE1_SACI1|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 1 DNVDIGFRN 9
D VDI +RN
Sbjct: 323 DEVDIPWRN 331


>sp|NFI_NANEQ|BIFUNCTIONAL methyltransferase-like/endonuclease|Nanoarchaeum equitans (strain

Query: 3 VDIGFRN 9
+DIG++N
Sbjct: 134 IDIGYKN 140


>sp|PUR2_METVS|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DNVDIGFRNQ 10
DN++I F N+
Sbjct: 328 DNINIEFENK 337


>sp|CDC66_HALSA|ORC1-TYPE DNA replication protein 6|Halobacterium salinarum (strain ATCC

Query: 1 DNVDIGFR 8
D V++GFR
Sbjct: 220 DRVEVGFR 227


>sp|HIS3_METM5|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 2 NVDIGFRN 9
N+D+ FRN
Sbjct: 11 NMDLKFRN 18


>sp|WTPC_METJA|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Methanocaldococcus jannaschii

Query: 1 DNVDIGFRNQ 10
DNV + FR Q
Sbjct: 284 DNVGLEFREQ 293


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VDIGFRNQ 10
+D+G++N+
Sbjct: 73 IDLGYKNE 80




18|Sequence|86|95|GFRNQVDDIR

>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 1 GFRNQVDDIR 10
GF + +DDIR
Sbjct: 465 GFNDDLDDIR 474


>sp|DHEB_HALSI|GLUTAMATE dehydrogenase B|Halobacterium salinarum (Halobacterium halobium)

Query: 1 GFRNQVDDIR 10
G+R Q DD+R
Sbjct: 70 GYRAQHDDVR 79


>sp|DHEB_HALSA|GLUTAMATE dehydrogenase B|Halobacterium salinarum (strain ATCC 700922

Query: 1 GFRNQVDDIR 10
G+R Q DD+R
Sbjct: 70 GYRAQHDDVR 79


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GFRNQVDD 8
GFR +VDD
Sbjct: 527 GFRVEVDD 534


>sp|RL3_METST|LARGE ribosomal subunit protein uL3|Methanosphaera stadtmanae (strain

Query: 2 FRNQVDDI 9
RN++DDI
Sbjct: 129 LRNKIDDI 136


>sp|SYR_SACS2|ARGININE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FRNQVDDIR 10
F+N VD++R
Sbjct: 555 FKNAVDNLR 563


>sp|TFE_METAR|TRANSCRIPTION factor E|Methanocella arvoryzae (strain DSM 22066

Query: 1 GFRNQVDDIR 10
RN++DD++
Sbjct: 157 ALRNRIDDLK 166


>sp|AMTAB_ARCFU|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Archaeoglobus

Query: 1 GFRNQVDDI 9
FRN DD+
Sbjct: 277 AFRNSFDDV 285


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GFRNQVDDIR 10
G NQ+ DI+
Sbjct: 152 GLNNQIRDIK 161


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 GFRNQVDDIR 10
G NQ+ DI+
Sbjct: 152 GLNNQIRDIK 161


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GFRNQVDDIR 10
G NQ+ DI+
Sbjct: 152 GLNNQIRDIK 161


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 GFRNQVDDIR 10
G NQ+ DI+
Sbjct: 152 GLNNQIRDIK 161


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 GFRNQVDDIR 10
G NQ+ DI+
Sbjct: 152 GLNNQIRDIK 161




19|Sequence|91|100|VDDIRSFLDS

>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 2 DDIRSFLDS 10
+D R+FLDS
Sbjct: 630 EDARTFLDS 638


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 IRSFLDS 10
IR+FLDS
Sbjct: 54 IRNFLDS 60


>sp|PRIL_ARCFU|DNA primase large subunit PriL|Archaeoglobus fulgidus (strain ATCC

Query: 2 DDIRSFLDS 10
D++R FLD+
Sbjct: 29 DELRKFLDT 37


>sp|ASSY_THEVO|ARGININOSUCCINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 IRSFLDS 10
I+SFLDS
Sbjct: 292 IKSFLDS 298


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VDDIRSFLD 9
V+DIRS L+
Sbjct: 814 VEDIRSILN 822


>sp|HIS4_METHJ|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanospirillum hungatei JF-1

Query: 1 VDDIRSFLD 9
+DD RS+LD
Sbjct: 85 LDDARSWLD 93


>sp|NNRD_CENSY|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Cenarchaeum symbiosum (strain A)

Query: 2 DDIRSFLDS 10
DD+R F+ S
Sbjct: 9 DDVRKFVPS 17


>sp|RNP3_METVS|RIBONUCLEASE P protein component 3|Methanococcus vannielii (strain ATCC 35089

Query: 2 DDIRSFLDS 10
DD+R FL++
Sbjct: 185 DDVRGFLNT 193


>sp|GFPS_METMA|GERANYLFARNESYL diphosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VDDIRSFLD 9
VDDI FL+
Sbjct: 214 VDDILEFLE 222


>sp|PRIS_SULAC|DNA primase small subunit PriS|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VDDIRSFLDS 10
VD++RSF+ S
Sbjct: 57 VDELRSFILS 66


>sp|Y1098_METJA|UNCHARACTERIZED protein MJ1098|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DDIRSFLD 9
+D+R+F+D
Sbjct: 53 EDLRTFID 60


>sp|PUR2_METS3|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DDIRSFLD 9
DD+ +FLD
Sbjct: 127 DDVSAFLD 134


>sp|DNLJ_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VDDIRSF 7
VDDIR F
Sbjct: 111 VDDIRDF 117




20|Sequence|96|105|SFLDSRHLDH

>sp|ARLY_METPE|ARGININOSUCCINATE lyase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 SFLDSRHLDH 10
+FL SR+ DH
Sbjct: 21 AFLSSRNADH 30


>sp|Y873_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 SFLDSRH 7
SFLD++H
Sbjct: 166 SFLDAKH 172


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 SRHLDH 10
SRH DH
Sbjct: 330 SRHFDH 335


>sp|UVRB_METAC|UVRABC system protein B|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 SRHLDH 10
SRH DH
Sbjct: 330 SRHFDH 335


>sp|SYDND_HALSA|ASPARTATE--TRNA(ASP/ASN) ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LDSRHLD 9
LD RHLD
Sbjct: 120 LDERHLD 126




21|Sequence|101|110|RHLDHYTVYN

>sp|Y120_METJA|UNCHARACTERIZED protein MJ0120|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DHYTVYN 10
DH+ +YN
Sbjct: 66 DHFAIYN 72


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 1 RHLDHYT 7
R LDHYT
Sbjct: 348 RLLDHYT 354


>sp|K6PF_PYRHO|ADP-SPECIFIC phosphofructokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HLDHYTVYN 10
HL YT YN
Sbjct: 5 HLSIYTAYN 13


>sp|HPPA_PYRAE|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Pyrobaculum aerophilum (strain

Query: 4 DHYTVYN 10
D+YT YN
Sbjct: 345 DYYTSYN 351


>sp|MDH_THEAC|MALATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RHLDHYTV 8
+H DHY +
Sbjct: 263 KHADHYGI 270


>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LDHYTVYN 10
LD++ VYN
Sbjct: 319 LDNFKVYN 326


>sp|FWDB_METMP|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanococcus

Query: 1 RHLDHYTVY 9
RH+ Y+V+
Sbjct: 161 RHMSRYSVF 169


>sp|Y1546_PYRCJ|UPF0282 protein Pcal_1546|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 HLDHYTV 8
H DH+TV
Sbjct: 75 HRDHFTV 81


>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 4 DHYTVYN 10
+ YTVYN
Sbjct: 239 EKYTVYN 245


>sp|HMDH_PYRAB|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 RHLDHYTV 8
+H+ HY++
Sbjct: 48 KHIGHYSI 55


>sp|Y1003_ARCFU|UNCHARACTERIZED protein AF_1003|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RHLDHYTV 8
++LD+YTV
Sbjct: 54 KNLDYYTV 61


>sp|Y020_PYRFU|UPF0173 protein PF0020|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HLDHY 6
H+DHY
Sbjct: 45 HMDHY 49


>sp|FWDB_METJA|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanocaldococcus

Query: 1 RHLDHYTVY 9
RH+ Y+V+
Sbjct: 162 RHMSRYSVF 170


>sp|Y1629_METJA|UPF0282 protein MJ1629|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HLDHYTVY 9
H DHYT +
Sbjct: 75 HYDHYTPF 82


>sp|Y1374_METJA|UNCHARACTERIZED protein MJ1374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HLDHYT 7
H DHYT
Sbjct: 67 HPDHYT 72


>sp|Y119_PYRAB|UPF0173 protein PYRAB01190|Pyrococcus abyssi (strain GE5 /

Query: 2 HLDHY 6
H+DHY
Sbjct: 45 HMDHY 49




22|Sequence|106|115|YTVYNLSPKS

>sp|DHOM_PYRHO|HOMOSERINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YTVYNLSPK 9
Y VYN SP+
Sbjct: 69 YEVYNFSPQ 77


>sp|ACDG_METKA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanopyrus

Query: 3 VYNLSPKS 10
VYNL PK+
Sbjct: 9 VYNLLPKA 16


>sp|SELB_METJA|SELENOCYSTEINE-SPECIFIC elongation factor|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YNLSPK 9
YNL+PK
Sbjct: 295 YNLAPK 300


>sp|GPT_SULAC|PUTATIVE UDP-N-acetylglucosamine--dolichyl-phosphate

Query: 2 TVYNLSP 8
T YNLSP
Sbjct: 70 TSYNLSP 76


>sp|AROA_NITMS|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 YTVYNLSPK 9
Y YN+SP+
Sbjct: 213 YKRYNISPQ 221


>sp|DTDA_METMP|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YTVYNLSPKS 10
Y+V+N+ KS
Sbjct: 26 YSVFNIEKKS 35




23|Sequence|111|120|LSPKSYRTAK

>sp|Y1633_METJA|UNCHARACTERIZED protein MJ1633|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSPKSYRTAK 10
LSP SY+ A+
Sbjct: 89 LSPNSYKIAR 98


>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 1 LSPKSYRT 8
L+PK YRT
Sbjct: 396 LTPKEYRT 403


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 SPKSYRTAK 10
SPKS +TAK
Sbjct: 185 SPKSNQTAK 193


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LSPKSYRTAK 10
L+PK Y T K
Sbjct: 540 LAPKPYYTGK 549


>sp|Y739_METJA|UNCHARACTERIZED protein MJ0739|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSPKSYRTAK 10
+SPKSY K
Sbjct: 58 VSPKSYEDIK 67




24|Sequence|116|125|YRTAKFHSRV

>sp|RL24_ARCFU|LARGE ribosomal subunit protein uL24|Archaeoglobus fulgidus (strain

Query: 1 YRTAKFHSR 9
Y+TAK H R
Sbjct: 17 YKTAKLHER 25


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 1 YRTAKFH 7
YRTAK H
Sbjct: 17 YRTAKIH 23


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 1 YRTAKFHSR 9
+RTA +H R
Sbjct: 115 FRTADWHER 123


>sp|SYW_THESM|TRYPTOPHAN--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 YRTAKFHSR 9
Y+TA HS+
Sbjct: 233 YKTAALHSK 241


>sp|TF2B2_THEAC|TRANSCRIPTION initiation factor IIB 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YRTAKFHSRV 10
YR K+H R+
Sbjct: 100 YRVRKWHQRI 109


>sp|SYW_PYRFU|TRYPTOPHAN--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YRTAKFHSR 9
Y+TA HS+
Sbjct: 234 YKTAALHSK 242


>sp|SYW_THEKO|TRYPTOPHAN--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YRTAKFHSR 9
Y+TA HS+
Sbjct: 233 YKTAAIHSK 241


>sp|TF2B2_THEVO|TRANSCRIPTION initiation factor IIB 2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YRTAKFHSRV 10
YR K+H R+
Sbjct: 106 YRVRKWHQRI 115


>sp|SYW_THEON|TRYPTOPHAN--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 YRTAKFHSR 9
Y+TA HS+
Sbjct: 233 YKTAAIHSK 241


>sp|SYW_PYRHO|TRYPTOPHAN--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YRTAKFHSR 9
Y+TA HS+
Sbjct: 234 YKTAALHSK 242


>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 YRTAKFHSR 9
Y+TA HS+
Sbjct: 234 YKTAAIHSK 242




25|Sequence|121|130|FHSRVSECSW

>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 2 HSRVSECS 9
HSR+ ECS
Sbjct: 494 HSRILECS 501


Query: 1 FHSRVSECS 9
F +RVS+CS
Sbjct: 402 FSARVSKCS 410


>sp|Y417_METJA|UNCHARACTERIZED protein MJ0417|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HSRVSECS 9
HS VS+CS
Sbjct: 8 HSIVSKCS 15


>sp|CBID_METJA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 HSRVSEC 8
HS+V++C
Sbjct: 271 HSKVADC 277




26|Sequence|126|135|SECSWPIRQA

>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 5 WPIRQA 10
WP+RQA
Sbjct: 187 WPVRQA 192


>sp|COFC_HALUD|2-PHOSPHO-L-LACTATE guanylyltransferase|Halorhabdus utahensis (strain DSM 12940

Query: 2 ECSWPI 7
EC WP+
Sbjct: 56 ECEWPV 61


>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 5 WPIRQA 10
WP+RQA
Sbjct: 197 WPVRQA 202


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 SWPIRQA 10
+WP+R+A
Sbjct: 187 TWPVRKA 193


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 4 SWPIRQA 10
+WP+R+A
Sbjct: 187 TWPVRKA 193


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ECSWPIRQ 9
+C WP R
Sbjct: 682 QCEWPDRH 689


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ECSWPIRQ 9
+C WP R
Sbjct: 682 QCEWPDRH 689


>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 5 WPIRQ 9
WP+RQ
Sbjct: 193 WPVRQ 197


>sp|RS4E_HYPBU|SMALL ribosomal subunit protein eS4|Hyperthermus butylicus (strain DSM

Query: 5 WPIRQ 9
WP+RQ
Sbjct: 19 WPVRQ 23


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 5 WPIRQ 9
WP+RQ
Sbjct: 194 WPVRQ 198


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 WPIRQA 10
WPIR+A
Sbjct: 838 WPIREA 843


>sp|AATA_HALMA|A-TYPE ATP synthase subunit A|Haloarcula marismortui (strain ATCC 43049

Query: 5 WPIRQ 9
WP+RQ
Sbjct: 197 WPVRQ 201




27|Sequence|131|140|PIRQAPSLHN

>sp|Y1787_ARCFU|PUTATIVE HTH-type transcriptional regulatory protein|Archaeoglobus fulgidus

Query: 1 PIRQAP 6
P+RQAP
Sbjct: 221 PVRQAP 226


>sp|TRPA_METJA|TRYPTOPHAN synthase alpha chain|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PIRQAPSLHN 10
PI +A SL+N
Sbjct: 132 PIEEADSLYN 141


>sp|COABC_THEKO|COENZYME A biosynthesis bifunctional protein|Thermococcus kodakarensis

Query: 1 PIRQAPSLHN 10
PI AP++H+
Sbjct: 131 PIMIAPAMHS 140


>sp|TRPF_METAC|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 RQAPSLHN 10
++AP LHN
Sbjct: 123 QEAPKLHN 130




28|Sequence|136|145|PSLHNLFAVC

>sp|DNLI_METPE|DNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PSLHNLFAVC 10
PSL ++A C
Sbjct: 111 PSLAEVYAAC 120


>sp|SDX_THEAC|PROBABLE sulredoxin|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LHNLFAVC 10
LH L AVC
Sbjct: 37 LHGLNAVC 44




29|Sequence|141|150|LFAVCRNMYN

>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FAVCRNMYN 10
FA+ RN YN
Sbjct: 47 FAIRRNTYN 55


>sp|RPO3_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum calidifontis (strain DSM

Query: 4 VCRNMYN 10
VCRN+ N
Sbjct: 181 VCRNLEN 187


>sp|METE_METJA|METHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VCRNMYN 10
VC N+YN
Sbjct: 193 VCGNVYN 199




30|Sequence|146|155|RNMYNWLLQN

>sp|Y1633_ARCFU|UNCHARACTERIZED protein AF_1633|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 YNWLLQN 10
Y+W LQN
Sbjct: 160 YSWFLQN 166


>sp|COPP_THEVO|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP

Query: 1 RNMYNWLLQ 9
RN+YN++++
Sbjct: 56 RNLYNYMVK 64


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RNMYNWL 7
RN++ WL
Sbjct: 301 RNLFKWL 307


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RNMYNWLL 8
R YNW L
Sbjct: 404 REFYNWSL 411


>sp|COAD_METBF|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 5 NWLLQ 9
NWLLQ
Sbjct: 57 NWLLQ 61


>sp|HDRE_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina acetivorans

Query: 3 MYNWLL 8
MY+W+L
Sbjct: 186 MYDWIL 191


>sp|AMT2_METJA|AMMONIUM transporter Amt2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RNMYNWLL 8
+NM +WL+
Sbjct: 70 KNMVDWLI 77


>sp|HIS5_SULTO|IMIDAZOLE glycerol phosphate synthase subunit|Sulfurisphaera tokodaii (strain

Query: 1 RNMYNWL 7
RN Y+W+
Sbjct: 188 RNFYSWV 194


>sp|SYFB_SULTO|PHENYLALANINE--TRNA ligase beta subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NMYNWLLQN 10
N+Y W L N
Sbjct: 5 NIYKWRLLN 13


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 2 NMYNWLL 8
NMY+W L
Sbjct: 150 NMYHWTL 156




31|Sequence|151|160|WLLQNPKNVC

>sp|GUAAB_METAC|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina

Query: 1 WLLQNPKNVC 10
W LQ P+ +C
Sbjct: 173 WALQLPEEIC 182


>sp|Y1633_ARCFU|UNCHARACTERIZED protein AF_1633|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WLLQNP 6
W LQNP
Sbjct: 162 WFLQNP 167


>sp|GUAAB_METMA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina mazei

Query: 1 WLLQNPKNVC 10
W LQ P +C
Sbjct: 173 WALQLPDEIC 182


>sp|BACS2_HALVA|SENSORY rhodopsin-2|Haloarcula vallismortis (Halobacterium vallismortis)

Query: 1 WLLQNPKNV 9
WLL P NV
Sbjct: 76 WLLTTPLNV 84


>sp|BACS2_HALMA|SENSORY rhodopsin II|Haloarcula marismortui (strain ATCC 43049

Query: 1 WLLQNPKNV 9
WLL P NV
Sbjct: 76 WLLTTPLNV 84


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LLQNPKNVC 10
LL NP ++C
Sbjct: 1364 LLVNPNDIC 1372


>sp|SUMT_METJA|UROPORPHYRINOGEN-III C-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LLQNPK 7
LLQNPK
Sbjct: 182 LLQNPK 187


>sp|PNPH_SACS2|PURINE nucleoside phosphorylase|Saccharolobus solfataricus (strain ATCC

Query: 2 LLQNPK 7
LLQNPK
Sbjct: 32 LLQNPK 37


>sp|ISCU2_ARCFU|IRON-SULFUR cluster assembly scaffold protein|Archaeoglobus fulgidus (strain

Query: 3 LQNPKNV 9
QNP+NV
Sbjct: 10 FQNPRNV 16


>sp|ISCU1_ARCFU|IRON-SULFUR cluster assembly scaffold protein|Archaeoglobus fulgidus (strain

Query: 3 LQNPKNV 9
QNP+NV
Sbjct: 10 FQNPRNV 16


>sp|QUEE_METHJ|7-CARBOXY-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LLQNPKNVC 10
LLQ P VC
Sbjct: 90 LLQKPHYVC 98


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WLLQNPK 7
++LQNPK
Sbjct: 1016 YMLQNPK 1022


>sp|GGR_METMP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain DSM 14266

Query: 4 QNPKNVC 10
+NPK +C
Sbjct: 170 KNPKEIC 176


>sp|GGR_METM7|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C7 /

Query: 4 QNPKNVC 10
+NPK +C
Sbjct: 170 KNPKEIC 176


>sp|DTDA_METJA|D-AMINOACYL-TRNA deacylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 NPKNVC 10
NPK VC
Sbjct: 80 NPKEVC 85


>sp|PDAD_PYRHO|PYRUVOYL-DEPENDENT arginine decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WLLQNPKNV 9
WL + PKN+
Sbjct: 52 WLDELPKNI 60


>sp|PDAD_PYRFU|PYRUVOYL-DEPENDENT arginine decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WLLQNPKNV 9
WL + PKN+
Sbjct: 52 WLDELPKNI 60


>sp|PDAD_PYRAB|PYRUVOYL-DEPENDENT arginine decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 WLLQNPKNV 9
WL + PKN+
Sbjct: 52 WLDELPKNI 60


>sp|PHOU_METJA|PHOSPHATE-SPECIFIC transport system accessory protein|Methanocaldococcus jannaschii

Query: 2 LLQNPKNV 9
+++NPKN+
Sbjct: 169 IIENPKNL 176


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 LLQNPKNVC 10
L+ NP ++C
Sbjct: 1386 LIVNPNDIC 1394


>sp|GUAAB_METBF|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina barkeri

Query: 1 WLLQNPKNVC 10
W L+ P +C
Sbjct: 173 WALKLPDEIC 182


>sp|GUAAB_METBU|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcoides

Query: 1 WLLQNPKNVC 10
W L P+ +C
Sbjct: 172 WALDLPEEIC 181


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 WLLQNPKNVC 10
WL +N N C
Sbjct: 503 WLPENHANPC 512




32|Sequence|156|165|PKNVCVVHCL

>sp|ACDB2_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 PKNVCVV 7
P NVCVV
Sbjct: 197 PTNVCVV 203


>sp|ACDB2_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 1 PKNVCVV 7
P NVCVV
Sbjct: 198 PTNVCVV 204


>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 PKNVCVV 7
P NVCVV
Sbjct: 197 PTNVCVV 203


>sp|ACDB1_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 PKNVCVV 7
P NVCVV
Sbjct: 197 PTNVCVV 203


>sp|ACDB1_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 1 PKNVCVV 7
P NVCVV
Sbjct: 197 PTNVCVV 203


>sp|ACDB1_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 PKNVCVV 7
P NVCVV
Sbjct: 197 PTNVCVV 203


>sp|GATE_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfurisphaera tokodaii (strain DSM

Query: 1 PKNVCVVHC 9
P N C+V C
Sbjct: 76 PPNSCLVEC 84


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus fulgidus

Query: 1 PKNVCVV 7
P NVC+V
Sbjct: 220 PTNVCIV 226


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 5 CVVHCL 10
C VHCL
Sbjct: 96 CYVHCL 101


>sp|Y816_METJA|UNCHARACTERIZED protein MJ0816|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VCVVHC 9
+C++HC
Sbjct: 129 ICLIHC 134


>sp|CAH_METJA|PROBABLE carbonic anhydrase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KNVCVVHC 9
++ CVVHC
Sbjct: 48 QDCCVVHC 55


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 1 PKNVCVVHCL 10
PK V +HC+
Sbjct: 387 PKRVAFIHCV 396


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 4 VCVVHCL 10
VC+V CL
Sbjct: 470 VCIVDCL 476


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 1 PKNVCVVHCL 10
PK V +HC+
Sbjct: 386 PKRVAFIHCV 395


>sp|RL1_METKA|LARGE ribosomal subunit protein uL1|Methanopyrus kandleri (strain AV19

Query: 1 PKNVCVV 7
P NVCV+
Sbjct: 59 PVNVCVI 65


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKNVCVVH 8
PKN VVH
Sbjct: 190 PKNCHVVH 197


>sp|DHPSL_METJA|7,8-DIHYDROPTERIN-6-METHYL-4-(BETA-D-RIBOFURANOSYL)-AMINOBENZENE-5'-PHOSPHATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KNVCVVHC 9
K +C HC
Sbjct: 259 KKICTGHC 266


>sp|MCH_METMA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 NVCVVHC 9
N CV++C
Sbjct: 226 NDCVIYC 232


>sp|MCH_METBF|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 3 NVCVVHC 9
N CV++C
Sbjct: 226 NDCVIYC 232


>sp|MCH_METAC|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 NVCVVHC 9
N CV++C
Sbjct: 226 NDCVIYC 232




33|Sequence|161|170|VVHCLDGRAA

>sp|IF1A_METJA|TRANSLATION initiation factor 1A|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VHCLDGR 8
V CLDG+
Sbjct: 37 VRCLDGK 43


>sp|IF1A_METS5|TRANSLATION initiation factor 1A|Metallosphaera sedula (strain ATCC 51363

Query: 1 VVHCLDGR 8
++ CLDG+
Sbjct: 37 IIACLDGK 44


>sp|OTC_METMA|ORNITHINE carbamoyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VVHCLDGR 8
V+HCL R
Sbjct: 258 VMHCLPAR 265


>sp|OTC_METBF|ORNITHINE carbamoyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VVHCLDGR 8
V+HCL R
Sbjct: 258 VMHCLPAR 265


>sp|OTC_METAC|ORNITHINE carbamoyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VVHCLDGR 8
V+HCL R
Sbjct: 258 VMHCLPAR 265


>sp|DHQS_HALMA|3-DEHYDROQUINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 VHCLDGRAA 10
VH DGR A
Sbjct: 348 VHTQDGRTA 356


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VVHCLDG 7
+VH LDG
Sbjct: 560 IVHTLDG 566


>sp|AMPPA_METMJ|AMP phosphorylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VVHCLDGRA 9
++HC D R+
Sbjct: 16 LLHCTDARS 24




34|Sequence|166|175|DGRAASSILV

>sp|DNLI_CENSY|DNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 GRAASSIL 9
GRAASSIL
Sbjct: 91 GRAASSIL 98


>sp|PYRB_AERPE|ASPARTATE carbamoyltransferase catalytic subunit|Aeropyrum pernix (strain

Query: 2 GRAASSILV 10
GRAASS ++
Sbjct: 166 GRAASSFIL 174


>sp|PYRB_HYPBU|ASPARTATE carbamoyltransferase catalytic subunit|Hyperthermus butylicus

Query: 2 GRAASSILV 10
GRAASS ++
Sbjct: 171 GRAASSFIL 179




35|Sequence|171|180|SSILVGAMFI

>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 1 SSILVGAM 8
SSIL+GA+
Sbjct: 175 SSILIGAI 182




36|Sequence|176|185|GAMFIFCNLY

>sp|Y609_METTH|UPF0179 protein MTH_609|Methanothermobacter thermautotrophicus (strain

Query: 1 GAMFIFC 7
G+MF+FC
Sbjct: 13 GSMFLFC 19


>sp|FPOH_METMA|F(420)H(2) dehydrogenase subunit H|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GAMFIFCNLY 10
GA+FI NLY
Sbjct: 110 GAVFIDGNLY 119


>sp|COXX_SACI7|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 FIFCNLY 10
FIF N+Y
Sbjct: 265 FIFSNIY 271


>sp|COXX_SACI6|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 FIFCNLY 10
FIF N+Y
Sbjct: 265 FIFSNIY 271


>sp|COXX_SACI4|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 FIFCNLY 10
FIF N+Y
Sbjct: 265 FIFSNIY 271


>sp|COXX_SACI3|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 4 FIFCNLY 10
FIF N+Y
Sbjct: 265 FIFSNIY 271


>sp|COXX_SACI2|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 FIFCNLY 10
FIF N+Y
Sbjct: 265 FIFSNIY 271


>sp|COXX_SACI1|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 FIFCNLY 10
FIF N+Y
Sbjct: 265 FIFSNIY 271




37|Sequence|181|190|FCNLYSTPGP

>sp|ENO_METM7|ENOLASE maripaludis (strain C7 /

Query: 2 CNLYSTPGP 10
CN Y P P
Sbjct: 139 CNAYVMPAP 147


>sp|ENO_METM5|ENOLASE maripaludis (strain C5 /

Query: 2 CNLYSTPGP 10
CN Y P P
Sbjct: 139 CNAYVMPAP 147


>sp|Y1185_METJA|UNCHARACTERIZED protein MJ1185|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NLYSTPG 9
NLY TPG
Sbjct: 470 NLYWTPG 476


>sp|RL24E_METTP|LARGE ribosomal subunit protein eL24|Methanothrix thermoacetophila

Query: 1 FCNLYSTPG 9
FCN TPG
Sbjct: 8 FCNTRITPG 16


>sp|RL2_HALMA|LARGE ribosomal subunit protein uL2|Haloarcula marismortui (strain ATCC

Query: 2 CNLYSTPG 9
CN+ S+PG
Sbjct: 107 CNVESSPG 114


>sp|RNP4_METHJ|RIBONUCLEASE P protein component 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 CNLYSTPG 9
CN Y PG
Sbjct: 66 CNAYLVPG 73


>sp|CAS1_HYPBU|CRISPR-ASSOCIATED endonuclease Cas1|Hyperthermus butylicus (strain DSM 5456

Query: 3 NLYSTPGP 10
N+Y TP P
Sbjct: 286 NIYKTPYP 293


>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 NLYSTPG 9
N+Y TPG
Sbjct: 82 NIYPTPG 88


>sp|RL14_NITMS|LARGE ribosomal subunit protein uL14|Nitrosopumilus maritimus (strain

Query: 1 FCNLYSTPGP 10
FCN+ GP
Sbjct: 60 FCNVVVKKGP 69


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 FCNLYSTPG 9
+C Y PG
Sbjct: 59 YCTYYDVPG 67


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 FCNLYSTPG 9
+C Y PG
Sbjct: 59 YCTYYDVPG 67


>sp|GSA_SULAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 LYSTPGP 10
LY TP P
Sbjct: 80 LYGTPSP 86


>sp|EF1A_HYPBU|ELONGATION factor 1-alpha|Hyperthermus butylicus (strain DSM 5456

Query: 3 NLYSTPG 9
N+YS PG
Sbjct: 241 NVYSIPG 247


>sp|EF1A_AERPE|ELONGATION factor 1-alpha|Aeropyrum pernix (strain ATCC 700893

Query: 3 NLYSTPG 9
N+YS PG
Sbjct: 239 NVYSIPG 245


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 FCNLYSTPG 9
+C Y PG
Sbjct: 56 YCTYYDPPG 64


>sp|RL2_METAR|LARGE ribosomal subunit protein uL2|Methanocella arvoryzae (strain DSM

Query: 2 CNLYSTPG 9
CN+ S PG
Sbjct: 107 CNIESQPG 114


>sp|Y939_SULTO|KELCH domain-containing protein STK_09390|Sulfurisphaera tokodaii

Query: 3 NLYSTP 8
NLYSTP
Sbjct: 57 NLYSTP 62


>sp|RL2_METTP|LARGE ribosomal subunit protein uL2|Methanothrix thermoacetophila (strain

Query: 2 CNLYSTPG 9
CN+ S PG
Sbjct: 106 CNIESKPG 113




38|Sequence|186|195|STPGPAIRLL

>sp|RL3_PICTO|LARGE ribosomal subunit protein uL3|Picrophilus torridus (strain ATCC

Query: 1 STPGPAIRLL 10
S PGPA RL+
Sbjct: 291 SVPGPAKRLI 300


>sp|RL3_THEVO|LARGE ribosomal subunit protein uL3|Thermoplasma volcanium (strain ATCC

Query: 1 STPGPAIRLL 10
S PGPA RL+
Sbjct: 293 SVPGPAKRLI 302


>sp|RL3_METB6|LARGE ribosomal subunit protein uL3|Methanoregula boonei (strain DSM

Query: 1 STPGPAIRLL 10
S PGPA RL+
Sbjct: 300 SIPGPAKRLI 309


>sp|FLAB2_NATMM|FLAGELLIN B2|Natrialba magadii (strain ATCC 43099

Query: 1 STPGPAIRL 9
S PG A+RL
Sbjct: 251 SEPGEAVRL 259


>sp|RL3_METBU|LARGE ribosomal subunit protein uL3|Methanococcoides burtonii (strain DSM

Query: 1 STPGPAIRLL 10
S PGP+ RL+
Sbjct: 300 SVPGPSKRLI 309


>sp|RL3_METMA|LARGE ribosomal subunit protein uL3|Methanosarcina mazei (strain ATCC

Query: 1 STPGPAIRLL 10
S PGP+ RL+
Sbjct: 300 SVPGPSKRLI 309


>sp|RL3_METHJ|LARGE ribosomal subunit protein uL3|Methanospirillum hungatei JF-1

Query: 1 STPGPAIRLL 10
S PGP+ RL+
Sbjct: 300 SVPGPSKRLV 309


>sp|RL3_METAC|LARGE ribosomal subunit protein uL3|Methanosarcina acetivorans (strain

Query: 1 STPGPAIRLL 10
S PGP+ RL+
Sbjct: 300 SVPGPSKRLI 309


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 3 PGPAIR 8
PGPA+R
Sbjct: 164 PGPALR 169


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 3 PGPAIR 8
PGPA+R
Sbjct: 164 PGPALR 169


>sp|RL3_METBF|LARGE ribosomal subunit protein uL3|Methanosarcina barkeri (strain Fusaro

Query: 1 STPGPAIRLL 10
S PGP+ RL+
Sbjct: 300 SVPGPSKRLI 309


>sp|RL1_NANEQ|LARGE ribosomal subunit protein uL1|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 TPGPAIRLL 10
T GPA+R+L
Sbjct: 205 TMGPAVRVL 213


>sp|UVRC_NATPD|UVRABC system protein C|Natronomonas pharaonis (strain ATCC 35678

Query: 4 GPAIRLL 10
GPA+RLL
Sbjct: 493 GPALRLL 499


>sp|RL3_METH6|LARGE ribosomal subunit protein uL3|Methanothrix harundinacea (strain

Query: 1 STPGPAIRLL 10
S PGP+ RL+
Sbjct: 297 SVPGPSKRLV 306


>sp|RL3_ARCFU|LARGE ribosomal subunit protein uL3|Archaeoglobus fulgidus (strain ATCC

Query: 1 STPGPAIRLL 10
S PGP RL+
Sbjct: 293 SVPGPVKRLI 302


>sp|RL3_METTP|LARGE ribosomal subunit protein uL3|Methanothrix thermoacetophila (strain

Query: 1 STPGPAIRLL 10
S PGP RL+
Sbjct: 296 SVPGPVKRLV 305


>sp|RL1_METB6|LARGE ribosomal subunit protein uL1|Methanoregula boonei (strain DSM

Query: 1 STPGPAIRLL 10
+T GP++RL+
Sbjct: 205 TTMGPSVRLV 214


>sp|RL3_METPE|LARGE ribosomal subunit protein uL3|Methanosphaerula palustris (strain

Query: 1 STPGPAIRLL 10
S PGP RL+
Sbjct: 300 SVPGPVKRLI 309


>sp|RIFK_PYRIL|RIBOFLAVIN kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 GPAIRL 9
GPAIRL
Sbjct: 53 GPAIRL 58


>sp|RL3_METTH|LARGE ribosomal subunit protein uL3|Methanothermobacter

Query: 1 STPGPAIRLL 10
S PGP RL+
Sbjct: 299 SVPGPTKRLV 308


>sp|RL3_NANEQ|LARGE ribosomal subunit protein uL3|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 STPGPAIRLL 10
S PGP RL+
Sbjct: 285 SVPGPRKRLI 294


>sp|RL1_METMJ|LARGE ribosomal subunit protein uL1|Methanoculleus marisnigri (strain

Query: 1 STPGPAIRLL 10
+T GPA+R++
Sbjct: 204 TTMGPAVRVI 213




39|Sequence|191|200|AIRLLYAKRP

>sp|PYRDB_PYRFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus furiosus (strain

Query: 5 LYAKRP 10
+YAKRP
Sbjct: 196 IYAKRP 201


>sp|PYRDB_PYRHO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus horikoshii (strain

Query: 5 LYAKRP 10
+YAKRP
Sbjct: 199 IYAKRP 204


>sp|RSMA_NATPD|PROBABLE ribosomal RNA small subunit|Natronomonas pharaonis (strain ATCC

Query: 1 AIRLLYAKRP 10
A RLL KRP
Sbjct: 124 AFRLLPEKRP 133


>sp|PYRDB_PYRAB|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus abyssi (strain GE5 /

Query: 5 LYAKRP 10
+YAKRP
Sbjct: 195 IYAKRP 200




40|Sequence|196|205|YAKRPGIGLS

>sp|AROD_PYRAE|3-DEHYDROQUINATE dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YAKRPGIGL 9
YAK PG GL
Sbjct: 149 YAKEPGDGL 157


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 AKRPGIGLS 10
A RPG+GL+
Sbjct: 537 AVRPGVGLA 545


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 AKRPGIGLS 10
A RPG+GL+
Sbjct: 537 AVRPGVGLA 545


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 AKRPGIGLS 10
A RPG+GL+
Sbjct: 537 AVRPGVGLA 545


>sp|GMHB_THEAC|PROBABLE D-glycero-D-manno-heptose-1,7-bisphosphate

Query: 3 KRPGIGL 9
++PGIGL
Sbjct: 113 RKPGIGL 119


>sp|RL4_THEAC|LARGE ribosomal subunit protein uL4|Thermoplasma acidophilum (strain

Query: 1 YAKRPGIGLS 10
+ RPG+G+S
Sbjct: 61 HTTRPGLGIS 70


>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 RPGIGLS 10
RPG+G+S
Sbjct: 554 RPGVGIS 560


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 YAKRPGIG 8
+AK PG+G
Sbjct: 75 FAKGPGLG 82


>sp|RS3_METTH|SMALL ribosomal subunit protein uS3|Methanothermobacter

Query: 1 YAKRPGI 7
YA+RPG+
Sbjct: 46 YAERPGM 52


>sp|IF2P_METAC|PROBABLE translation initiation factor IF-2|Methanosarcina acetivorans

Query: 2 AKRPGIG 8
AK PG+G
Sbjct: 236 AKNPGVG 242


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 AKRPGIGLS 10
A +PG+GL+
Sbjct: 537 AVKPGVGLA 545


>sp|RBL_METBF|RIBULOSE bisphosphate carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 3 KRPGIGLS 10
K PG GLS
Sbjct: 125 KGPGFGLS 132


>sp|GATE_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanospirillum hungatei JF-1 (strain

Query: 1 YAKRPGIG 8
YAK+ G+G
Sbjct: 323 YAKKCGVG 330


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 AKRPGIGLS 10
A +PG+GL+
Sbjct: 537 AVKPGVGLA 545


>sp|RS3_METS3|SMALL ribosomal subunit protein uS3|Methanobrevibacter smithii (strain

Query: 1 YAKRPGI 7
YA+RPG+
Sbjct: 46 YAERPGM 52


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YAKRPGIGLS 10
++KR G+G S
Sbjct: 167 WSKRNGVGFS 176


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 YAKRPGI 7
YAK PG+
Sbjct: 175 YAKGPGV 181




41|Sequence|201|210|GIGLSPSHRR

>sp|GYRA_HALL2|DNA gyrase subunit A|Haloferax lucentense (strain DSM 14919

Query: 3 GLSPSHRR 10
GL P HRR
Sbjct: 51 GLKPVHRR 58


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 IGLSPSHRR 10
+G PSH+R
Sbjct: 1303 VGTQPSHKR 1311


>sp|SYFB_METS5|PHENYLALANINE--TRNA ligase beta subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 IGLSPSHRR 10
+G++PS+RR
Sbjct: 477 LGVAPSYRR 485


>sp|GYRA_HALWD|DNA gyrase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 3 GLSPSHRR 10
GL P HRR
Sbjct: 51 GLKPVHRR 58


>sp|SYS_METS5|SERINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 IGLSPSHRR 10
+GLSP+ R+
Sbjct: 276 VGLSPAFRK 284


>sp|HEMH_THEVO|FERROCHELATASE volcanium (strain ATCC 51530

Query: 3 GLSPSHR 9
GLSPS+R
Sbjct: 49 GLSPSNR 55


>sp|TRM14_ARCFU|TRNA (guanine(6)-N2)-methyltransferase|Archaeoglobus fulgidus (strain

Query: 1 GIGLSPS-HRR 10
+GLSP+ HRR
Sbjct: 10 AVGLSPNYHRR 20


>sp|MTRC_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanothermobacter marburgensis

Query: 1 GIGLSPS 7
GIGL+PS
Sbjct: 219 GIGLNPS 225


>sp|LEU3_METTH|3-ISOPROPYLMALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GIGLSPS 7
G+GL+PS
Sbjct: 236 GLGLAPS 242


>sp|LEU3_METJA|3-ISOPROPYLMALATE/3-METHYLMALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GIGLSPS 7
G+GL+PS
Sbjct: 239 GLGLAPS 245


>sp|LEU3_ARCFU|3-ISOPROPYLMALATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GIGLSPS 7
G+GL+PS
Sbjct: 234 GLGLAPS 240


>sp|AKSF_METJA|HOMOISOCITRATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GIGLSPS 7
G+GL+PS
Sbjct: 249 GLGLAPS 255


>sp|RS19_PYRAE|SMALL ribosomal subunit protein uS19|Pyrobaculum aerophilum (strain

Query: 3 GLSPSHRR 10
GL P HR+
Sbjct: 62 GLKPEHRK 69


>sp|RS19_PYRNV|SMALL ribosomal subunit protein uS19|Pyrobaculum neutrophilum (strain

Query: 3 GLSPSHRR 10
GL P HR+
Sbjct: 62 GLKPEHRK 69


>sp|RL2_STAMF|LARGE ribosomal subunit protein uL2|Staphylothermus marinus (strain

Query: 5 SPSHRR 10
SPSHRR
Sbjct: 19 SPSHRR 24


>sp|RS19_PYRCJ|SMALL ribosomal subunit protein uS19|Pyrobaculum calidifontis (strain

Query: 3 GLSPSHRR 10
GL P HR+
Sbjct: 62 GLKPEHRK 69


>sp|RS19_PYRIL|SMALL ribosomal subunit protein uS19|Pyrobaculum islandicum (strain DSM

Query: 3 GLSPSHRR 10
GL P HR+
Sbjct: 64 GLKPEHRK 71


>sp|RS19_PYRAR|SMALL ribosomal subunit protein uS19|Pyrobaculum arsenaticum (strain

Query: 3 GLSPSHRR 10
GL P HR+
Sbjct: 63 GLKPEHRK 70


>sp|COFD_HALMA|2-PHOSPHO-L-LACTATE transferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GIGLSPS 7
G+GL PS
Sbjct: 268 GVGLEPS 274




42|Sequence|206|215|PSHRRYLGYM

>sp|GAL1_PYRHO|GALACTOKINASE horikoshii (strain ATCC 700860

Query: 1 PSHRRYLGYM 10
P HR++ GY+
Sbjct: 230 PLHRKFFGYI 239


>sp|BACS2_HALSA|SENSORY rhodopsin-2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PSHRRY 6
PSHRRY
Sbjct: 29 PSHRRY 34


>sp|GAL1_THEKO|GALACTOKINASE kodakarensis (strain ATCC BAA-918

Query: 4 RRYLGYM 10
RRYLGY+
Sbjct: 232 RRYLGYV 238


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 3 HRRYLG 8
HR+YLG
Sbjct: 728 HRKYLG 733


>sp|AATB_STAMF|A-TYPE ATP synthase subunit B|Staphylothermus marinus (strain ATCC 43588

Query: 1 PSHRRYLGYM 10
PS R Y GYM
Sbjct: 274 PSRRGYPGYM 283


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SHRRYLGY 9
+HR+YL Y
Sbjct: 682 NHRQYLSY 689


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 HRRYLGY 9
H+R LGY
Sbjct: 64 HKRMLGY 70


>sp|AATB_IGNH4|A-TYPE ATP synthase subunit B|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PSHRRYLGYM 10
PS + Y GYM
Sbjct: 274 PSRQGYPGYM 283


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 HRRYLGY 9
H+R LGY
Sbjct: 64 HKRMLGY 70


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 HRRYLGY 9
H+R LGY
Sbjct: 64 HKRMLGY 70


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PSHRRY 6
P+H+RY
Sbjct: 178 PAHKRY 183


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 2 SHRRYLGYM 10
+HR Y+G M
Sbjct: 57 AHRSYVGNM 65


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 2 SHRRYLGYM 10
+HR Y+G M
Sbjct: 57 AHRSYVGNM 65


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 2 SHRRYLGYM 10
+HR Y+G M
Sbjct: 57 AHRSYVGNM 65




43|Sequence|211|220|YLGYMCDLLA

>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 1 YLGYMCDLLA 10
+ GY+C+LLA
Sbjct: 182 FSGYLCELLA 191


>sp|CCA_THEVO|CCA-ADDING enzyme|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YLGYMCDLL 9
+ GY+C+LL
Sbjct: 173 FSGYLCELL 181


>sp|CCA_THEAI|CCA-ADDING enzyme|Thermoplasma acidophilum

Query: 1 YLGYMCDLL 9
+ GY+C+LL
Sbjct: 173 FSGYLCELL 181


>sp|CCA_THEAC|CCA-ADDING enzyme|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YLGYMCDLL 9
+ GY+C+LL
Sbjct: 173 FSGYLCELL 181


>sp|CCA_METM7|CCA-ADDING enzyme|Methanococcus maripaludis (strain C7 /

Query: 1 YLGYMCDLL 9
+ GY+C+LL
Sbjct: 186 FSGYLCELL 194


>sp|CCA_METJA|CCA-ADDING enzyme|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YLGYMCDLL 9
+ GY+C+LL
Sbjct: 185 FSGYLCELL 193


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 1 YLGYMCDLL 9
+ GY+C+LL
Sbjct: 177 FSGYLCELL 185


>sp|CCA_HALSA|CCA-ADDING enzyme|Halobacterium salinarum (strain ATCC 700922

Query: 1 YLGYMCDLL 9
+ GY+C+LL
Sbjct: 178 FSGYLCELL 186


>sp|CCA_HALS3|CCA-ADDING enzyme|Halobacterium salinarum (strain ATCC 29341

Query: 1 YLGYMCDLL 9
+ GY+C+LL
Sbjct: 178 FSGYLCELL 186


>sp|CCA_ARCFU|CCA-ADDING enzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YLGYMCDLL 9
+ GY+C+LL
Sbjct: 170 FSGYLCELL 178


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 1 YLGYMCDLL 9
+ GY+C+LL
Sbjct: 186 FSGYLCELL 194


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 1 YLGYMCDLL 9
+ GY+C+LL
Sbjct: 186 FSGYLCELL 194


>sp|CCA_PICTO|CCA-ADDING enzyme|Picrophilus torridus (strain ATCC 700027

Query: 1 YLGYMCDLL 9
+ GY+C++L
Sbjct: 173 FSGYLCEIL 181


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 2 LGYMCD 7
LGY CD
Sbjct: 705 LGYTCD 710


>sp|RRP4_PYRAE|EXOSOME complex component Rrp4|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LGYMCDLLA 10
+GY+ D+LA
Sbjct: 67 IGYVTDVLA 75




44|Sequence|216|225|CDLLADKPYR

>sp|MFNA_METHJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanospirillum hungatei JF-1

Query: 1 CDLLADKPY 9
C+LL + PY
Sbjct: 244 CNLLVETPY 252


>sp|BASB_HALS3|CHEMOTACTIC signal transduction system substrate-binding|Halobacterium

Query: 2 DLLADKPYR 10
DLLA PY+
Sbjct: 205 DLLASVPYQ 213


>sp|G1PDH_PYRAB|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus abyssi (strain GE5 /

Query: 2 DLLADKP 8
DLL DKP
Sbjct: 254 DLLLDKP 260


>sp|FAU1_PYRAE|PROBABLE ribonuclease FAU-1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DLLADKPY 9
DLL DK Y
Sbjct: 390 DLLVDKTY 397


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DLLADKPY 9
DLL DK Y
Sbjct: 390 DLLVDKAY 397


>sp|Y3100_HALMA|PUTATIVE heme-binding protein rrnAC3100|Haloarcula marismortui (strain ATCC

Query: 2 DLLADKP 8
D+LAD+P
Sbjct: 657 DVLADRP 663


>sp|FAU1_PYRNV|PROBABLE ribonuclease FAU-1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 DLLADKPY 9
DLL DK Y
Sbjct: 389 DLLVDKAY 396


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 CDLLADKP 8
C+L+ D+P
Sbjct: 555 CELIIDEP 562


>sp|Y2021_HALSA|PUTATIVE heme-binding protein VNG_2021C|Halobacterium salinarum (strain ATCC

Query: 2 DLLADKP 8
D+LAD+P
Sbjct: 480 DVLADRP 486


>sp|HIS8_METKA|HISTIDINOL-PHOSPHATE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 CDLLADKPY 9
D LAD PY
Sbjct: 89 IDYLADPPY 97




45|Sequence|221|230|DKPYRPHFKP

>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DKPYRPH 7
DKPY+PH
Sbjct: 368 DKPYKPH 374


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DKPYRPH 7
D+PY+PH
Sbjct: 372 DRPYKPH 378


>sp|RFCL_PYRAR|REPLICATION factor C large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DKPYRPHFKP 10
+ PY P F+P
Sbjct: 155 NNPYDPRFRP 164


>sp|RFCL_PYRNV|REPLICATION factor C large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DKPYRPHFKP 10
+ PY P F+P
Sbjct: 155 NNPYDPKFRP 164


>sp|RFCL_PYRIL|REPLICATION factor C large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DKPYRPHFKP 10
+ PY P F+P
Sbjct: 155 NNPYDPKFRP 164


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DKPYRPHFKP 10
+ PY P F+P
Sbjct: 155 NNPYDPKFRP 164


>sp|MSMJS_METJA|SMALL-CONDUCTANCE mechanosensitive channel MscMJ|Methanocaldococcus jannaschii

Query: 3 PYRPHFK 9
PYR HF+
Sbjct: 286 PYRVHFR 292


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 2 KPYRPHF 8
+PYRP+F
Sbjct: 321 EPYRPYF 327


>sp|DGGGP_SACS2|DIGERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DKPYRP 6
+KPYRP
Sbjct: 68 NKPYRP 73


>sp|DGGGP_KORCO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DKPYRP 6
+KPYRP
Sbjct: 67 NKPYRP 72


>sp|Y1639_METJA|UNCHARACTERIZED protein MJ1639|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YRPHFKP 10
YRP F+P
Sbjct: 29 YRPFFEP 35


>sp|CDC6_METHJ|ORC1-TYPE DNA replication protein|Methanospirillum hungatei JF-1 (strain

Query: 4 YRPHFKP 10
YRPH P
Sbjct: 32 YRPHILP 38


>sp|CAPPA_SULAC|PHOSPHOENOLPYRUVATE carboxylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PYRPHFKP 10
P+R HF P
Sbjct: 259 PFRGHFSP 266


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DKPYRPH 7
D+PY+P+
Sbjct: 372 DRPYKPY 378


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PYRPHFKP 10
P+R HF P
Sbjct: 259 PFRGHFNP 266


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 KPYRPHFKP 10
KP+RP + P
Sbjct: 593 KPFRPLYTP 601


>sp|GYAR_THEPD|GLYOXYLATE reductase|Thermofilum pendens (strain DSM 2475

Query: 1 DKPYRPHF 8
DKP+ P+F
Sbjct: 134 DKPWNPYF 141


>sp|PUR5_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 DKPYRPH 7
D P+ PH
Sbjct: 267 DDPFEPH 273


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DKPYRPH 7
+KPY+P+
Sbjct: 372 EKPYKPY 378


>sp|RL4_METTP|LARGE ribosomal subunit protein uL4|Methanothrix thermoacetophila

Query: 2 KPYRPHF 8
+PY PHF
Sbjct: 44 QPYGPHF 50


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DKPYRPH 7
+K YRPH
Sbjct: 7 EKSYRPH 13


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DKPYRPH 7
+KPY+P+
Sbjct: 372 EKPYKPY 378


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DKPYRPH 7
+KPY+P+
Sbjct: 372 EKPYKPY 378


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 KPYRPHF 8
K YRPH+
Sbjct: 83 KKYRPHY 89


>sp|RS3_STAMF|SMALL ribosomal subunit protein uS3|Staphylothermus marinus (strain ATCC

Query: 5 RPHFKP 10
RPH KP
Sbjct: 187 RPHLKP 192


>sp|FEN_HYPBU|FLAP endonuclease 1|Hyperthermus butylicus (strain DSM 5456

Query: 2 KPYRPHFK 9
K YR HF+
Sbjct: 331 KAYREHFR 338


>sp|GLNA2_HALMT|GAMMA-GLUTAMYLPUTRESCINE synthetase|Haloferax mediterranei (strain ATCC 33500

Query: 2 KPYRPHFKP 10
K Y P F P
Sbjct: 185 KKYHPEFSP 193


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 DKPYR 5
DKPYR
Sbjct: 393 DKPYR 397


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 KPYRPHFKP 10
KP+RP + P
Sbjct: 592 KPFRPLYTP 600


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 KPYRPHFKP 10
KP+RP + P
Sbjct: 596 KPFRPLYTP 604


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DKPYRP 6
DKPY P
Sbjct: 195 DKPYYP 200


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 6 PHFKP 10
PHFKP
Sbjct: 767 PHFKP 771


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 6 PHFKP 10
PHFKP
Sbjct: 767 PHFKP 771




46|Sequence|226|235|PHFKPLTIKS

>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 1 PHFKPLTI 8
PHFKP I
Sbjct: 767 PHFKPYDI 774


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 1 PHFKPLTI 8
PHFKP I
Sbjct: 767 PHFKPYDI 774


>sp|MTAD_THESM|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus sibiricus (strain DSM 12597

Query: 1 PHFKPLT 7
PH +P+T
Sbjct: 367 PHLRPIT 373


>sp|TRM1_METS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanobrevibacter smithii

Query: 2 HFKPLTIKS 10
HF PL IK+
Sbjct: 362 HFNPLGIKT 370


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 2 HFKPLTI 8
HFKP+ I
Sbjct: 759 HFKPVEI 765


>sp|RTCA_PYRCJ|RNA 3'-terminal phosphate cyclase|Pyrobaculum calidifontis (strain

Query: 3 FKPLTIK 9
FKP TIK
Sbjct: 75 FKPKTIK 81


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 2 HFKPL 6
HFKPL
Sbjct: 121 HFKPL 125


>sp|RTCA_PYRIL|RNA 3'-terminal phosphate cyclase|Pyrobaculum islandicum (strain DSM

Query: 2 HFKPLTIK 9
+FKP T+K
Sbjct: 75 YFKPKTLK 82


>sp|ACDE_METTH|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanothermobacter

Query: 1 PHFKPLTI 8
PH K LTI
Sbjct: 136 PHIKTLTI 143


>sp|ARGC_META3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PHFKPLT 7
PH PLT
Sbjct: 231 PHLAPLT 237




47|Sequence|231|240|LTIKSITVSP

>sp|MFNA_THEGJ|PROBABLE L-aspartate decarboxylase|Thermococcus gammatolerans (strain DSM

Query: 3 IKSITVSP 10
+KSIT+ P
Sbjct: 222 VKSITIDP 229


>sp|MFNA_THEKO|L-ASPARTATE decarboxylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IKSITVSP 10
+KSIT+ P
Sbjct: 222 VKSITIDP 229




48|Sequence|236|245|ITVSPIPFFN

>sp|HIS7_SACS2|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 SPIPFFN 10
+PIPFFN
Sbjct: 32 TPIPFFN 38


>sp|HIS7_SACI7|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 SPIPFFN 10
+P+PFFN
Sbjct: 32 TPVPFFN 38


>sp|HIS7_SACI3|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 SPIPFFN 10
+P+PFFN
Sbjct: 32 TPVPFFN 38


>sp|HIS7_SACI2|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 SPIPFFN 10
+P+PFFN
Sbjct: 32 TPVPFFN 38


>sp|HIS7_SACI1|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 SPIPFFN 10
+P+PFFN
Sbjct: 32 TPVPFFN 38


>sp|HIS7_SACI6|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 SPIPFFN 10
+P+PFFN
Sbjct: 32 TPVPFFN 38


>sp|HIS7_SACI4|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 SPIPFFN 10
+P+PFFN
Sbjct: 32 TPVPFFN 38


>sp|KHSE_SULAC|HOMOSERINE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ITVSPIP 7
+TVSPIP
Sbjct: 153 VTVSPIP 159


>sp|DGGGP_ARCFU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ITVSPIPFF 9
+++SPIP F
Sbjct: 224 VSISPIPLF 232


>sp|RS3_STAMF|SMALL ribosomal subunit protein uS3|Staphylothermus marinus (strain

Query: 1 ITVSPIP 7
ITVSP+P
Sbjct: 83 ITVSPVP 89


>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ITVSPIPFF 9
++VSPI FF
Sbjct: 76 VSVSPIQFF 84


>sp|HIS7_METS5|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 4 SPIPFFN 10
+P+PFF+
Sbjct: 32 TPVPFFD 38


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ITVSPIPF 8
+ VSP+PF
Sbjct: 568 VHVSPVPF 575


>sp|RLME_METM7|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 2 TVSPIPFFN 10
TV P+P+ N
Sbjct: 81 TVKPLPYEN 89


>sp|RLME_METM6|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 2 TVSPIPFFN 10
TV P+P+ N
Sbjct: 81 TVKPLPYEN 89


>sp|RLME_METM5|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 2 TVSPIPFFN 10
TV P+P+ N
Sbjct: 81 TVKPLPYEN 89


>sp|Y1571_PYRHO|PUTATIVE transport protein PH1571|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ITVSPIP 7
IT+SPIP
Sbjct: 265 ITISPIP 271


>sp|DGGGP_SACS2|DIGERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 SPIPFF 9
SP+PFF
Sbjct: 217 SPLPFF 222


>sp|KORA_ARCFU|2-OXOGLUTARATE synthase subunit KorA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ITVSPIPFFN 10
IT SP+ FN
Sbjct: 94 ITESPVVIFN 103


>sp|DGGGP_METMA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ITVSPIPFF 9
+ +SP+P+F
Sbjct: 227 VILSPLPYF 235




49|Sequence|241|250|IPFFNKQRNG

>sp|GSA_NITMS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 PFFNKQRNG 10
PFF K+ NG
Sbjct: 29 PFFTKKANG 37


>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PFFNKQRNG 10
PF N +NG
Sbjct: 278 PFVNDAKNG 286


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 4 FNKQRNG 10
FN++RNG
Sbjct: 164 FNEERNG 170


>sp|PORC_THELN|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Thermococcus litoralis

Query: 2 PFFNKQRNG 10
PFF +R G
Sbjct: 36 PFFGVERRG 44


>sp|PORC_THEKO|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Thermococcus kodakarensis

Query: 2 PFFNKQRNG 10
PFF +R G
Sbjct: 36 PFFGVERRG 44


>sp|PORC_PYRHO|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Pyrococcus horikoshii

Query: 2 PFFNKQRNG 10
PFF +R G
Sbjct: 36 PFFGVERRG 44


>sp|PORC_PYRFU|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Pyrococcus furiosus (strain

Query: 2 PFFNKQRNG 10
PFF +R G
Sbjct: 36 PFFGVERRG 44


>sp|PORC_PYRAB|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Pyrococcus abyssi (strain

Query: 2 PFFNKQRNG 10
PFF +R G
Sbjct: 36 PFFGVERRG 44


>sp|PORC_METJA|PYRUVATE synthase subunit PorC|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PFFNKQRNG 10
PFF +R G
Sbjct: 36 PFFGVERRG 44


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IPFFNKQ 7
IP FNK+
Sbjct: 258 IPLFNKE 264


>sp|PORC_METTH|PYRUVATE synthase subunit PorC|Methanothermobacter thermautotrophicus

Query: 2 PFFNKQRNG 10
PFF +R G
Sbjct: 36 PFFGVERRG 44


>sp|Y468_SULAC|PUTATIVE antitoxin Saci_0468|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IPFFNKQRNG 10
I F+NK R G
Sbjct: 32 IEFYNKNRKG 41


>sp|PORC_METTM|PYRUVATE synthase subunit PorC|Methanothermobacter marburgensis (strain

Query: 2 PFFNKQRNG 10
PFF +R G
Sbjct: 36 PFFGVERRG 44


>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 2 PFFNKQRNG 10
PFF K +G
Sbjct: 32 PFFTKSASG 40




50|Sequence|246|255|KQRNGCRPYC

>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 1 KQRNGCRPYC 10
K+RN C+ C
Sbjct: 179 KERNSCKMEC 188


>sp|Y770_METJA|UNCHARACTERIZED protein MJ0770|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RNGCR 7
RNGCR
Sbjct: 67 RNGCR 71


>sp|GSA_NATPD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 RNGCR 7
RNGCR
Sbjct: 371 RNGCR 375


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 3 RNGCRPY 9
R GCR Y
Sbjct: 426 REGCREY 432


>sp|DPOL_PYRGL|DNA polymerase|Pyrococcus glycovorans

Query: 3 RNGCRPY 9
R GCR Y
Sbjct: 426 REGCREY 432


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 3 RNGCRPY 9
R GCR Y
Sbjct: 425 REGCREY 431


>sp|AGOG_PYRAE|N-GLYCOSYLASE/DNA lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RNGCRP 8
R GCRP
Sbjct: 248 RGGCRP 253


>sp|RPIA_METB6|RIBOSE-5-PHOSPHATE isomerase A|Methanoregula boonei (strain DSM 21154

Query: 5 GCRPY 9
GCRP+
Sbjct: 157 GCRPF 161


>sp|RL30_PYRCJ|LARGE ribosomal subunit protein uL30|Pyrobaculum calidifontis (strain DSM

Query: 1 KQRNGCRPYC 10
K R G RP C
Sbjct: 125 KAREGQRPPC 134


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 NGCRPYC 10
NG PYC
Sbjct: 164 NGTCPYC 170


>sp|Y1996_ARCFU|UNCHARACTERIZED protein AF_1996|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RNGCRP 8
+NGC P
Sbjct: 2 KNGCNP 7




51|Sequence|251|260|CRPYCDVLIG

>sp|MTNA_METST|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosphaera stadtmanae

Query: 1 CRPYCDVLIG 10
CR Y DV+ G
Sbjct: 29 CRTYTDVIDG 38


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RPYCDVLIG 10
RPY +L+G
Sbjct: 345 RPYAHILLG 353


>sp|KCY_PYRNV|CYTIDYLATE kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 RPYCDVLI 9
RPY DV I
Sbjct: 89 RPYADVCI 96


>sp|KCY_PYRCJ|CYTIDYLATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 RPYCDVLI 9
RPY DV I
Sbjct: 89 RPYADVCI 96


>sp|KCY_PYRAR|CYTIDYLATE kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RPYCDVLI 9
RPY DV I
Sbjct: 89 RPYADVCI 96


>sp|KCY_PYRAE|CYTIDYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RPYCDVLI 9
RPY DV I
Sbjct: 89 RPYADVCI 96


>sp|AROA_METMA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RPYCDVLI 9
RPY DV I
Sbjct: 192 RPYVDVTI 199


>sp|AROA_METAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 RPYCDVLI 9
RPY DV I
Sbjct: 192 RPYVDVTI 199


>sp|PUR5_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 YCDVLIG 10
YCDV+ G
Sbjct: 31 YCDVITG 37


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 YCDVLIG 10
YCD +IG
Sbjct: 146 YCDFVIG 152


>sp|KCY_PYRIL|CYTIDYLATE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RPYCDVLI 9
RPY D+ I
Sbjct: 89 RPYADICI 96


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CRPYC 5
C PYC
Sbjct: 184 CAPYC 188


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RPYCDVLIG 10
RPY +L+G
Sbjct: 718 RPYAHLLLG 726


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 2 RPYCDVLIG 10
RPY +L+G
Sbjct: 345 RPYAHLLLG 353


>sp|COBD_PYRFU|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus furiosus (strain

Query: 3 PYCDVLIG 10
PY D L+G
Sbjct: 44 PYLDFLVG 51


>sp|DNAG_METBU|DNA primase DnaG|Methanococcoides burtonii (strain DSM 6242

Query: 2 RPYCDVLIG 10
+P+ D LIG
Sbjct: 386 KPHSDALIG 394


>sp|RL1_METJA|LARGE ribosomal subunit protein uL1|Methanocaldococcus jannaschii (strain

Query: 2 RPYCDVLIG 10
+PY VL+G
Sbjct: 157 KPYFQVLVG 165


>sp|IMDH_KORCO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 PYCDVLI 9
PY DVL+
Sbjct: 234 PYVDVLV 240


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 2 RPYCDVLI 9
RPY +VLI
Sbjct: 536 RPYDEVLI 543


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RPYCDVLI 9
RPY +VLI
Sbjct: 539 RPYDEVLI 546


>sp|SYH_HALSA|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 RPYCDV 7
R YCDV
Sbjct: 255 RQYCDV 260


>sp|SYH_HALS3|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 RPYCDV 7
R YCDV
Sbjct: 255 RQYCDV 260


>sp|RRP4_IGNAA|EXOSOME complex component Rrp4|Ignisphaera aggregans (strain DSM 17230

Query: 5 CDVLIG 10
CD+L+G
Sbjct: 192 CDILVG 197


>sp|PDXT_HALSA|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Halobacterium salinarum

Query: 3 PYCDVLI 9
P CDVL+
Sbjct: 44 PECDVLL 50


>sp|PDXT_HALS3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Halobacterium salinarum

Query: 3 PYCDVLI 9
P CDVL+
Sbjct: 44 PECDVLL 50


>sp|PYRB_PYRAB|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus abyssi (strain

Query: 4 YCDVLI 9
YCDV++
Sbjct: 100 YCDVIV 105


>sp|PYRB_METKA|ASPARTATE carbamoyltransferase catalytic subunit|Methanopyrus kandleri

Query: 4 YCDVLI 9
YCDV++
Sbjct: 100 YCDVIV 105


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RPYCDVLIG 10
+P+C +L G
Sbjct: 202 KPFCGILNG 210


>sp|Y2403_ARCFU|UNCHARACTERIZED protein AF_2403|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CRPYCDVLIG 10
C PYC +++
Sbjct: 51 CPPYCPIVVA 60




52|Sequence|256|265|DVLIGETKIY

>sp|PRNK_METJA|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase MJ1315|Methanocaldococcus jannaschii (strain

Query: 1 DVLIGETKIY 10
DV+IG TK++
Sbjct: 225 DVVIGGTKVF 234


>sp|Y727_METTH|UPF0280 protein MTH_727|Methanothermobacter thermautotrophicus (strain

Query: 2 VLIGETKI 9
++IGET+I
Sbjct: 21 IVIGETRI 28


>sp|ILVC_UNCAG|KETOL-ACID reductoisomerase (NAD(+))|Uncultured archaeon GZfos26G2

Query: 1 DVLIGETKI 9
+V+IGET+I
Sbjct: 41 NVVIGETEI 49


>sp|AROE_PYRFU|SHIKIMATE dehydrogenase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 5 GETKIY 10
GETKIY
Sbjct: 4 GETKIY 9


>sp|PURL_METS5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Metallosphaera sedula (strain ATCC 51363

Query: 2 VLIGETK 8
VLIGET+
Sbjct: 546 VLIGETR 552


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 DVLIGET 7
DVLIG+T
Sbjct: 882 DVLIGKT 888


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 1 DVLIGET 7
DVLIG+T
Sbjct: 292 DVLIGKT 298


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 1 DVLIGET 7
DVLIG+T
Sbjct: 292 DVLIGKT 298


>sp|RS17_NANEQ|SMALL ribosomal subunit protein uS17|Nanoarchaeum equitans (strain

Query: 2 VLIGETK 8
VLIGET+
Sbjct: 85 VLIGETR 91


>sp|RPO11_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo11|Archaeoglobus fulgidus (strain ATCC

Query: 3 LIGETKIY 10
LIGE +IY
Sbjct: 49 LIGEPEIY 56




53|Sequence|261|270|ETKIYSTCTD

>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 3 KIYSTCTD 10
K+Y+TC D
Sbjct: 3 KLYNTCMD 10


>sp|NSUN6_PYRHO|TRNA (cytosine(72)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 4 IYSTCT 9
+YSTCT
Sbjct: 323 VYSTCT 328


>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 YSTCTD 10
Y TCTD
Sbjct: 522 YGTCTD 527


>sp|COOS2_METAC|CARBON monoxide dehydrogenase 2|Methanosarcina acetivorans (strain ATCC

Query: 5 YSTCTD 10
Y TCTD
Sbjct: 522 YGTCTD 527


>sp|TRCM_PYRAB|TRNA (cytosine(49)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5

Query: 4 IYSTCT 9
+YSTCT
Sbjct: 235 VYSTCT 240


>sp|DNLI1_METBF|DNA ligase 1|Methanosarcina barkeri (strain Fusaro /

Query: 5 YSTCTD 10
YS CTD
Sbjct: 155 YSVCTD 160


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TKIYSTCT 9
TKIYST T
Sbjct: 322 TKIYSTNT 329


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 YSTCTD 10
YS CTD
Sbjct: 187 YSVCTD 192


>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 YSTCTD 10
YS CTD
Sbjct: 188 YSVCTD 193


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 4 IYSTCT 9
+Y+TCT
Sbjct: 145 VYATCT 150


>sp|COME_METMP|SULFOPYRUVATE decarboxylase subunit beta|Methanococcus maripaludis (strain DSM

Query: 5 YSTCTD 10
+STCTD
Sbjct: 112 HSTCTD 117




54|Sequence|266|275|STCTDFERMK

>sp|Y1007_METMA|UPF0215 protein MM_1007|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TCTDFERMK 10
+C DFE+++
Sbjct: 106 SCPDFEKIR 114


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TCTDFERMK 10
T DFER+K
Sbjct: 449 TKDDFERLK 457




55|Sequence|271|280|FERMKEYRVQ

>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FERMKEYR 8
FE MKEYR
Sbjct: 452 FEHMKEYR 459


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 4 MKEYRVQ 10
MKEYR++
Sbjct: 363 MKEYRIE 369


>sp|KDPQ_HALS3|PROBABLE Kdp system regulatory protein|Halobacterium salinarum (strain ATCC

Query: 2 ERMKEYRVQ 10
ER+ EY VQ
Sbjct: 196 ERLAEYGVQ 204


>sp|COFD_METMA|2-PHOSPHO-L-LACTATE transferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FERMKEYRVQ 10
+ERMKE ++
Sbjct: 74 YERMKELGIE 83


>sp|RL10_HALVD|LARGE ribosomal subunit protein uL10|Haloferax volcanii (strain ATCC

Query: 1 FERMKEY 7
FE +KEY
Sbjct: 78 FEELKEY 84


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 1 FERMKEYRV 9
F R+K YRV
Sbjct: 578 FARLKGYRV 586


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FERMKEYR 8
+ +MKEYR
Sbjct: 20 YTQMKEYR 27


>sp|Y1090_ARCFU|PUTATIVE antitoxin AF_1090|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ERMKEYRVQ 10
ER+++YRV+
Sbjct: 37 ERLRKYRVK 45


>sp|VAPC1_METJA|RIBONUCLEASE VapC1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FERMKEYRVQ 10
FER+KE+ ++
Sbjct: 123 FERLKEFGLK 132


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ERMKEYRVQ 10
E MKEY+V
Sbjct: 697 EAMKEYKVH 705


>sp|CAS1_HYPBU|CRISPR-ASSOCIATED endonuclease Cas1|Hyperthermus butylicus (strain DSM 5456

Query: 3 RMKEYRVQ 10
RM++YRV+
Sbjct: 90 RMEQYRVK 97


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 1 FERMKEYRV 9
F R+K YR+
Sbjct: 579 FARLKGYRI 587


>sp|LEU1_PYRFU|2-ISOPROPYLMALATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RMKEYRV 9
++KEYRV
Sbjct: 443 KLKEYRV 449


>sp|Y491_METJA|UNCHARACTERIZED protein MJ0491|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FERMKE 6
FERMKE
Sbjct: 116 FERMKE 121




56|Sequence|276|285|EYRVQDGKIF

>sp|Y856_METTH|METALLOPROTEASE MTH_856|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 YRVQDGKI 9
+R+QDG+I
Sbjct: 387 FRIQDGEI 394


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 1 EYRVQDGKIF 10
+Y V+DGK++
Sbjct: 830 QYAVKDGKVY 839


>sp|AROC_METS3|CHORISMATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EYRVQDGKIF 10
EY ++D KI+
Sbjct: 264 EYYIEDNKIY 273


>sp|RL10_SULTO|LARGE ribosomal subunit protein uL10|Sulfurisphaera tokodaii (strain DSM

Query: 3 RVQDGKI 9
+VQDGKI
Sbjct: 148 KVQDGKI 154


>sp|RL10_SULAC|LARGE ribosomal subunit protein uL10|Sulfolobus acidocaldarius (strain

Query: 3 RVQDGKI 9
+VQDGKI
Sbjct: 150 KVQDGKI 156


>sp|SIHH_METKA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanopyrus kandleri (strain AV19 /

Query: 1 EYRVQDGK 8
EYR+ DGK
Sbjct: 327 EYRMPDGK 334


>sp|RL10_PYRAE|LARGE ribosomal subunit protein uL10|Pyrobaculum aerophilum (strain ATCC

Query: 3 RVQDGKIF 10
RVQ+GKI+
Sbjct: 155 RVQEGKIW 162


>sp|CARA_METKA|CARBAMOYL phosphate synthase small chain|Methanopyrus kandleri (strain AV19 /

Query: 1 EYRVQDGK 8
EYR DGK
Sbjct: 168 EYRFSDGK 175


>sp|LIVG_ARCFU|PROBABLE branched-chain amino acid transport|Archaeoglobus fulgidus

Query: 2 YRVQDGKIF 10
YR +GK+F
Sbjct: 53 YRADEGKVF 61


>sp|Y2171_ARCFU|UNCHARACTERIZED protein AF_2171|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EYRVQDGKI 9
EYR+ DG +
Sbjct: 132 EYRIDDGNV 140


>sp|NADB_SULTO|L-ASPARTATE oxidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EYRVQDGKI 9
E RV+DGK+
Sbjct: 143 EIRVKDGKV 151


>sp|CS3HD_SACS2|CRISPR-ASSOCIATED endonuclease Cas3-HD|Saccharolobus solfataricus (strain ATCC

Query: 2 YRVQDGKI 9
YRV DGKI
Sbjct: 20 YRVLDGKI 27


>sp|RL10_SACS2|LARGE ribosomal subunit protein uL10|Saccharolobus solfataricus (strain

Query: 1 EYRVQDGKI 9
+ +VQDGK+
Sbjct: 149 QTKVQDGKV 157


>sp|RL10_SACI7|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 EYRVQDGKI 9
+ +VQDGK+
Sbjct: 149 QTKVQDGKV 157


>sp|RL10_SACI6|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 EYRVQDGKI 9
+ +VQDGK+
Sbjct: 149 QTKVQDGKV 157


>sp|RL10_SACI4|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 EYRVQDGKI 9
+ +VQDGK+
Sbjct: 149 QTKVQDGKV 157


>sp|RL10_SACI3|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 EYRVQDGKI 9
+ +VQDGK+
Sbjct: 149 QTKVQDGKV 157


>sp|RL10_SACI2|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 EYRVQDGKI 9
+ +VQDGK+
Sbjct: 149 QTKVQDGKV 157


>sp|RL10_SACI1|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 EYRVQDGKI 9
+ +VQDGK+
Sbjct: 149 QTKVQDGKV 157


>sp|PYRE_STAMF|OROTATE phosphoribosyltransferase|Staphylothermus marinus (strain ATCC

Query: 1 EYRVQDGKI 9
EYR+ GKI
Sbjct: 24 EYRLTSGKI 32


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 EYRVQDGK 8
+YRV DGK
Sbjct: 218 QYRVVDGK 225


>sp|Y642_METMP|UPF0285 protein MMP0642|Methanococcus maripaludis (strain DSM 14266

Query: 4 VQDGKIF 10
++DGKIF
Sbjct: 165 IKDGKIF 171


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 3 RVQDGKIF 10
RV+DGK+
Sbjct: 388 RVKDGKVL 395


>sp|SAHH_AERPE|ADENOSYLHOMOCYSTEINASE pernix (strain ATCC 700893

Query: 1 EYRVQDGK 8
EYR+ DG+
Sbjct: 322 EYRLPDGR 329


>sp|HAS8_HALS8|HALOCIN-S8 S8a

Query: 1 EYRVQDGKIF 10
EY V++ K+F
Sbjct: 211 EYNVREHKVF 220


>sp|RS27A_METST|SMALL ribosomal subunit protein eS31|Methanosphaera stadtmanae (strain

Query: 2 YRVQDGKI 9
Y V+DGKI
Sbjct: 8 YEVKDGKI 15


>sp|AROE_IGNH4|SHIKIMATE dehydrogenase (NADP(+))|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 RVQDGKIF 10
+++DGKI+
Sbjct: 87 KIKDGKIY 94


>sp|Y1370_METJA|UPF0285 protein MJ1370|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VQDGKIF 10
++DGKIF
Sbjct: 164 IKDGKIF 170


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter

Query: 1 EYRVQDGKI 9
+YRV+ GK+
Sbjct: 56 KYRVETGKV 64


>sp|SAHH_PYRAB|ADENOSYLHOMOCYSTEINASE abyssi (strain GE5 /

Query: 1 EYRVQDGK 8
EY+++DG+
Sbjct: 325 EYKLKDGR 332


>sp|Y603_PYRAB|UNCHARACTERIZED protein PYRAB06030|Pyrococcus abyssi (strain GE5 /

Query: 1 EYRVQDGKI 9
++RV++GKI
Sbjct: 15 KFRVEEGKI 23


>sp|HYD2A_PYRFU|SULFHYDROGENASE 2 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YRVQDGKI 9
YR+++GK+
Sbjct: 345 YRIENGKV 352


>sp|SAHH_PYRHO|ADENOSYLHOMOCYSTEINASE horikoshii (strain ATCC 700860

Query: 1 EYRVQDGK 8
EY+++DG+
Sbjct: 324 EYKLKDGR 331


>sp|SAHH_PYRFU|ADENOSYLHOMOCYSTEINASE furiosus (strain ATCC 43587

Query: 1 EYRVQDGK 8
EY+++DG+
Sbjct: 324 EYKLKDGR 331


>sp|RADB_METST|DNA repair and recombination protein|Methanosphaera stadtmanae (strain

Query: 2 YRVQDG 7
YRV+DG
Sbjct: 130 YRVEDG 135


>sp|RS27A_METKA|SMALL ribosomal subunit protein eS31|Methanopyrus kandleri (strain AV19

Query: 2 YRVQDGKI 9
Y V+DGK+
Sbjct: 10 YEVKDGKV 17


>sp|RL10_AERPE|LARGE ribosomal subunit protein uL10|Aeropyrum pernix (strain ATCC 700893

Query: 1 EYRVQDGKIF 10
+Y+V+ GKI+
Sbjct: 152 QYQVRGGKIY 161


>sp|SYH_METTH|HISTIDINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EYRVQDGKI 9
E +QDGK+
Sbjct: 391 EREIQDGKV 399




57|Sequence|281|290|DGKIFIPLNI

>sp|Y2370_ARCFU|UPF0148 protein AF_2370|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGKIFIP 7
DGKIF P
Sbjct: 43 DGKIFCP 49


>sp|SYFB_HALSA|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 DGKIFIPLN 9
DG F+PL+
Sbjct: 169 DGDTFVPLD 177


>sp|SYFB_HALS3|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 DGKIFIPLN 9
DG F+PL+
Sbjct: 169 DGDTFVPLD 177


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DGKIFIPLNI 10
DG F+PLN+
Sbjct: 168 DGINFVPLNL 177


>sp|THIC2_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DGKIFIPLNI 10
+G+I IP NI
Sbjct: 36 NGRIVIPSNI 45


>sp|RS19_HYPBU|SMALL ribosomal subunit protein uS19|Hyperthermus butylicus (strain DSM

Query: 1 DGKIFIPLNI 10
+GK FIP+ I
Sbjct: 97 NGKEFIPVKI 106


>sp|RS19_AERPE|SMALL ribosomal subunit protein uS19|Aeropyrum pernix (strain ATCC 700893

Query: 1 DGKIFIPLNI 10
+GK FIP+ I
Sbjct: 97 NGKEFIPVKI 106


>sp|KHSE_SACI7|HOMOSERINE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 IFIPLNI 10
+F+PLNI
Sbjct: 172 LFVPLNI 178


>sp|KHSE_SACI1|HOMOSERINE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 IFIPLNI 10
+F+PLNI
Sbjct: 172 LFVPLNI 178


>sp|GLNK1_HALMT|NITROGEN regulatory protein GlnK1|Haloferax mediterranei (strain ATCC 33500

Query: 1 DGKIFI 6
DGKIFI
Sbjct: 98 DGKIFI 103


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 1 DGKIFIP 7
DGK+F P
Sbjct: 234 DGKMFTP 240


>sp|GLNK2_HALMT|NITROGEN regulatory protein GlnK2|Haloferax mediterranei (strain ATCC 33500

Query: 1 DGKIFI 6
DGKIFI
Sbjct: 99 DGKIFI 104


>sp|PROB_NATPD|GLUTAMATE 5-kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GKIFIPLN 9
G +F+P+N
Sbjct: 272 GTLFVPIN 279


>sp|HIS6_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 3 KIFIPLNI 10
K+FIPL +
Sbjct: 72 KVFIPLTV 79


>sp|RS19_THEGJ|SMALL ribosomal subunit protein uS19|Thermococcus gammatolerans (strain

Query: 1 DGKIFIPLNI 10
+GK F+P+ I
Sbjct: 86 NGKEFVPIEI 95


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 1 DGKIFIP 7
DG +F+P
Sbjct: 973 DGDVFVP 979


>sp|GLNB2_METTH|NITROGEN regulatory protein P-II 2|Methanothermobacter thermautotrophicus

Query: 1 DGKIFI 6
DGKIFI
Sbjct: 91 DGKIFI 96


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 DGKIFI 6
DGKIFI
Sbjct: 551 DGKIFI 556


>sp|Y795_PYRHO|UPF0148 protein PH0795|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DGKIFIPL 8
DG++F P+
Sbjct: 37 DGRVFCPV 44


>sp|Y1270_PYRAB|UPF0148 protein PYRAB12700|Pyrococcus abyssi (strain GE5 /

Query: 1 DGKIFIPL 8
DG++F P+
Sbjct: 37 DGRVFCPV 44


>sp|HIS6_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 3 KIFIPLNI 10
K+FIP+ +
Sbjct: 73 KVFIPMTV 80


>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GKIFIPLNI 10
GK+ IP N+
Sbjct: 37 GKVVIPKNV 45


>sp|RS19_THESM|SMALL ribosomal subunit protein uS19|Thermococcus sibiricus (strain DSM

Query: 1 DGKIFIPLNI 10
+GK F+P+ I
Sbjct: 86 NGKEFVPVQI 95


>sp|RS19_IGNH4|SMALL ribosomal subunit protein uS19|Ignicoccus hospitalis (strain KIN4/I

Query: 1 DGKIFIPLNI 10
+GK F+P+ I
Sbjct: 92 NGKEFVPVKI 101


>sp|KHSE_SACI6|HOMOSERINE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 IFIPLNI 10
+F+PLN+
Sbjct: 172 LFVPLNV 178


>sp|KHSE_SACI4|HOMOSERINE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 IFIPLNI 10
+F+PLN+
Sbjct: 172 LFVPLNV 178


>sp|KHSE_SACI3|HOMOSERINE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 IFIPLNI 10
+F+PLN+
Sbjct: 172 LFVPLNV 178


>sp|KHSE_SACI2|HOMOSERINE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 IFIPLNI 10
+F+PLN+
Sbjct: 172 LFVPLNV 178


>sp|RS19_THEPD|SMALL ribosomal subunit protein uS19|Thermofilum pendens (strain DSM 2475

Query: 1 DGKIFIPLNI 10
+GK F+P+ I
Sbjct: 94 NGKEFVPVEI 103


>sp|RS19_THEON|SMALL ribosomal subunit protein uS19|Thermococcus onnurineus (strain

Query: 1 DGKIFIPLNI 10
+GK F+P+ I
Sbjct: 86 NGKEFVPVEI 95


>sp|RS19_THEKO|SMALL ribosomal subunit protein uS19|Thermococcus kodakarensis (strain

Query: 1 DGKIFIPLNI 10
+GK F+P+ I
Sbjct: 86 NGKEFVPVEI 95


>sp|RS19_PYRHO|SMALL ribosomal subunit protein uS19|Pyrococcus horikoshii (strain ATCC

Query: 1 DGKIFIPLNI 10
+GK F+P+ I
Sbjct: 85 NGKEFVPVEI 94


>sp|RS19_PYRFU|SMALL ribosomal subunit protein uS19|Pyrococcus furiosus (strain ATCC

Query: 1 DGKIFIPLNI 10
+GK F+P+ I
Sbjct: 85 NGKEFVPVEI 94


>sp|RS19_PYRAB|SMALL ribosomal subunit protein uS19|Pyrococcus abyssi (strain GE5 /

Query: 1 DGKIFIPLNI 10
+GK F+P+ I
Sbjct: 85 NGKEFVPVEI 94


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DGKIFIPLNI 10
DG+ IP N+
Sbjct: 36 DGQAVIPANV 45


>sp|GLNB3_METBA|NITROGEN fixation nifHD2 region GlnB-like|Methanosarcina barkeri

Query: 1 DGKIFI 6
DGKIF+
Sbjct: 84 DGKIFV 89


>sp|GLNB1_METTH|NITROGEN regulatory protein P-II 1|Methanothermobacter thermautotrophicus

Query: 1 DGKIFI 6
DGKIF+
Sbjct: 91 DGKIFV 96


>sp|GLNB1_METMP|NITROGEN fixation nifHD region glnB-like|Methanococcus maripaludis (strain

Query: 1 DGKIFI 6
DGKIF+
Sbjct: 84 DGKIFV 89


>sp|IF5A_METAR|TRANSLATION initiation factor 5A|Methanocella arvoryzae (strain DSM 22066

Query: 1 DGKIFIPL 8
D KI++P+
Sbjct: 61 DAKIYVPI 68


>sp|RS19_STAMF|SMALL ribosomal subunit protein uS19|Staphylothermus marinus (strain ATCC

Query: 1 DGKIFIPLNI 10
+GK FIP+ I
Sbjct: 96 NGKEFIPVRI 105


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 GKIFIPLNI 10
GK+++P N+
Sbjct: 70 GKVYVPSNL 78


>sp|GLNK2_ARCFU|NITROGEN regulatory protein GlnK2|Archaeoglobus fulgidus (strain ATCC

Query: 1 DGKIFI 6
DGKIFI
Sbjct: 88 DGKIFI 93


>sp|GLNB1_METIV|NITROGEN fixation nifHD region GlnB-like|Methanobacterium ivanovii

Query: 1 DGKIFI 6
DGKIFI
Sbjct: 84 DGKIFI 89


>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GKIFIPLNI 10
GKI IP N+
Sbjct: 37 GKIAIPSNL 45


>sp|DNAG_IGNH4|DNA primase DnaG|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GKIFIPLNI 10
G+I++P N+
Sbjct: 63 GEIYVPSNL 71


>sp|GLNB1_METTM|NITROGEN fixation nifHD region GlnB-like|Methanothermobacter marburgensis

Query: 1 DGKIFI 6
DGKIFI
Sbjct: 84 DGKIFI 89


>sp|GLNB4_METBA|NITROGEN fixation nifHD2 region GlnB-like|Methanosarcina barkeri

Query: 1 DGKIFI 6
DGKIF+
Sbjct: 96 DGKIFV 101


>sp|GLKA_THESM|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 DGKIFIPL 8
DG I++P+
Sbjct: 154 DGPIYVPI 161


>sp|RIB7_METJA|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DGKIFIPLN 9
D K+ +PLN
Sbjct: 82 DSKLRVPLN 90


>sp|GLNB1_METTL|NITROGEN fixation nifHD region GlnB-like|Methanothermococcus

Query: 1 DGKIFI 6
DGKIFI
Sbjct: 84 DGKIFI 89




58|Sequence|286|295|IPLNITVQGD

>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IPLNITVQG 9
IP+N TVQG
Sbjct: 162 IPMNATVQG 170


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IPLNITVQG 9
IP+N T+QG
Sbjct: 162 IPMNATIQG 170


>sp|TRUD_METMA|PROBABLE tRNA pseudouridine synthase D|Methanosarcina mazei (strain ATCC

Query: 1 IPLNITVQGD 10
IPLN V+GD
Sbjct: 290 IPLNRAVEGD 299


>sp|RL6_AERPE|LARGE ribosomal subunit protein uL6|Aeropyrum pernix (strain ATCC 700893

Query: 2 PLNITVQGD 10
P+N+ V+GD
Sbjct: 99 PINVKVEGD 107


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 IPLNITVQGD 10
+PL ITV+ D
Sbjct: 853 MPLKITVRAD 862


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 2 PLNITVQG 9
PL +TVQG
Sbjct: 159 PLALTVQG 166


>sp|SPT5_PYRFU|TRANSCRIPTION elongation factor Spt5|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IPLNITVQGD 10
+P+ +T++GD
Sbjct: 131 VPIPVTIKGD 140


>sp|HIS7_METPE|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 LNITVQGD 10
LNIT +GD
Sbjct: 53 LNITAKGD 60


>sp|RL6_HALMA|LARGE ribosomal subunit protein uL6|Haloarcula marismortui (strain ATCC

Query: 3 LNITVQGD 10
L+ITV+GD
Sbjct: 19 LDITVEGD 26


>sp|RL11_METBF|LARGE ribosomal subunit protein uL11|Methanosarcina barkeri (strain

Query: 1 IPLNITVQG 9
+P+ +TV+G
Sbjct: 129 VPMGVTVEG 137


>sp|PYRK_METAC|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina

Query: 1 IPLNITV 7
+PLN+T+
Sbjct: 2 LPLNVTI 8


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IPLNITVQGD 10
I LN+T +GD
Sbjct: 650 IILNMTTEGD 659


>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 2 PLNITVQGD 10
PLN ++GD
Sbjct: 290 PLNRPIEGD 298


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 1 IPLNITVQGD 10
I LN+T +GD
Sbjct: 650 IILNMTTEGD 659


>sp|TRUD_PYRAB|PROBABLE tRNA pseudouridine synthase D|Pyrococcus abyssi (strain GE5 /

Query: 1 IPLNITVQGD 10
+PLN + GD
Sbjct: 272 LPLNEAIPGD 281


>sp|SYE_SULAC|GLUTAMATE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 NITVQGD 10
N+TV GD
Sbjct: 473 NVTVNGD 479


>sp|SPT5_THEKO|TRANSCRIPTION elongation factor Spt5|Thermococcus kodakarensis (strain ATCC

Query: 1 IPLNITVQGD 10
+P+ +TV+G+
Sbjct: 132 VPIPVTVRGE 141


>sp|Y555_METJA|PUTATIVE aminopeptidase MJ0555|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IPLNITVQGD 10
I L++T+ GD
Sbjct: 227 IALDVTIAGD 236


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LNITVQGD 10
LN+T +GD
Sbjct: 652 LNMTTEGD 659




59|Sequence|291|300|TVQGDVVVSM

>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 1 TVQGDVVV 8
T QGD+VV
Sbjct: 273 TDQGDIVV 280


>sp|HIS3_METAR|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanocella arvoryzae (strain DSM 22066

Query: 1 TVQGDVV 7
T++GDVV
Sbjct: 100 TIEGDVV 106


>sp|Y070_ARCFU|UNCHARACTERIZED protein AF_0070|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TVQGDVVVS 9
T+ GD VVS
Sbjct: 31 TLSGDAVVS 39


>sp|OTCC_HALSA|ORNITHINE carbamoyltransferase, catabolic|Halobacterium salinarum (strain

Query: 1 TVQGDVVVSM 10
V GDV VSM
Sbjct: 209 AVYGDVFVSM 218


>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 1 TVQGDVVVS 9
T+ GDVV+S
Sbjct: 43 TIYGDVVIS 51




60|Sequence|296|305|VVVSMYHLRS

>sp|RIFK_METS5|RIBOFLAVIN kinase|Metallosphaera sedula (strain ATCC 51363

Query: 2 VVSMYHLR 9
V+S YHLR
Sbjct: 193 VISPYHLR 200




61|Sequence|301|310|YHLRSTIGSR

>sp|HIS8_THEKO|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HLRSTIGSR 10
H+R TIG R
Sbjct: 310 HIRVTIGRR 318


>sp|HIS8_HALSA|HISTIDINOL-PHOSPHATE aminotransferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 HLRSTIGSR 10
H+R TIG+R
Sbjct: 342 HVRITIGTR 350


>sp|HIS8_HALS3|HISTIDINOL-PHOSPHATE aminotransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 HLRSTIGSR 10
H+R TIG+R
Sbjct: 342 HVRITIGTR 350


>sp|HIS8_THEGJ|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 HLRSTIGSR 10
H+R T+G R
Sbjct: 310 HIRVTVGRR 318


>sp|Y238_METTH|UNCHARACTERIZED protein MTH_238|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 HLRSTIGSR 10
H+R T+G+R
Sbjct: 177 HVRDTLGAR 185


>sp|HIS8_PYRFU|HISTIDINOL-PHOSPHATE aminotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HLRSTIGSR 10
H+R TIG +
Sbjct: 310 HIRVTIGKK 318




62|Sequence|306|315|TIGSRLQAKV

***** No hits found ******


63|Sequence|311|320|LQAKVTNTQI

>sp|COBQ_THEAC|PROBABLE cobyric acid synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LQAKVTNTQ 9
LQAK NT+
Sbjct: 58 LQAKAANTE 66




64|Sequence|316|325|TNTQIFQLQF

>sp|FLAB3_NATMM|FLAGELLIN B3|Natrialba magadii (strain ATCC 43099

Query: 1 TNTQIFQLQF 10
T+TQI LQF
Sbjct: 279 TDTQIDNLQF 288


>sp|MTMC2_METAC|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina acetivorans (strain ATCC

Query: 1 TNTQIFQ 7
TNT+IF+
Sbjct: 2 TNTEIFE 8


>sp|MTRG_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit G|Methanocaldococcus jannaschii

Query: 1 TNTQIFQL 8
TN ++FQL
Sbjct: 34 TNAELFQL 41




65|Sequence|321|330|FQLQFHTGFI

>sp|Y1492_METJA|UNCHARACTERIZED protein MJ1492|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QLQFHTGFI 10
+L+F TGFI
Sbjct: 126 ELRFITGFI 134




66|Sequence|326|335|HTGFIPLDTT

>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 1 HTGFIPLDT 9
H GF+P DT
Sbjct: 615 HGGFVPNDT 623


>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 TGFIPLDTT 10
+GF+P DTT
Sbjct: 606 SGFVPNDTT 614


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 TGFIPLDTT 10
+GF+P DTT
Sbjct: 606 SGFVPNDTT 614


>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 1 HTGFIPL 7
HTGF+P+
Sbjct: 255 HTGFLPV 261


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 3 GFIPLDTT 10
GFIP D+T
Sbjct: 302 GFIPTDST 309


>sp|RIFK_METM5|RIBOFLAVIN kinase|Methanococcus maripaludis (strain C5 /

Query: 2 TGFIPLDTT 10
TGFIP + T
Sbjct: 31 TGFIPFEGT 39


>sp|RS12_PYRIL|SMALL ribosomal subunit protein uS12|Pyrobaculum islandicum (strain DSM

Query: 2 TGFIPLD 8
T F+PLD
Sbjct: 85 TAFVPLD 91


>sp|RS12_PYRAR|SMALL ribosomal subunit protein uS12|Pyrobaculum arsenaticum (strain

Query: 2 TGFIPLD 8
T F+PLD
Sbjct: 85 TAFVPLD 91


>sp|RS12_PYRAE|SMALL ribosomal subunit protein uS12|Pyrobaculum aerophilum (strain

Query: 2 TGFIPLD 8
T F+PLD
Sbjct: 85 TAFVPLD 91


>sp|KTHY_METMP|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GFIPLDTT 10
GFI +DTT
Sbjct: 168 GFIVIDTT 175


>sp|FAU1_HALWD|PROBABLE ribonuclease FAU-1|Haloquadratum walsbyi (strain DSM 16790

Query: 2 TGFIPLDTT 10
TG++P D+T
Sbjct: 144 TGYLPYDST 152


>sp|TOP6A_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HTGFIP 6
H GFIP
Sbjct: 136 HLGFIP 141


>sp|KTHY_METM7|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain C7 /

Query: 3 GFIPLDTT 10
GFI +DTT
Sbjct: 168 GFIIIDTT 175


>sp|KTHY_METM6|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain C6 /

Query: 3 GFIPLDTT 10
GFI +DTT
Sbjct: 168 GFIIIDTT 175


>sp|Y1873_ARCFU|UNCHARACTERIZED protein AF_1873|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HTGFIPLDT 9
+TGF LDT
Sbjct: 141 YTGFSSLDT 149


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM 14266

Query: 1 HTGFIP 6
H GFIP
Sbjct: 246 HCGFIP 251


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HTGFIP 6
H GFIP
Sbjct: 245 HCGFIP 250


>sp|RS15_CALMQ|SMALL ribosomal subunit protein uS15|Caldivirga maquilingensis (strain

Query: 2 TGFIPLDTT 10
TG +PLD T
Sbjct: 132 TGVLPLDFT 140


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 1 HTGFIP 6
H+GF+P
Sbjct: 247 HSGFLP 252


>sp|SECY_HALMA|PROTEIN translocase subunit SecY|Haloarcula marismortui (strain ATCC 43049

Query: 3 GFIPLDT 9
GF+P DT
Sbjct: 136 GFLPADT 142


>sp|SPEE_THEVO|POLYAMINE aminopropyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HTGFIP 6
+TGFIP
Sbjct: 219 YTGFIP 224


>sp|SPEE_THEAC|POLYAMINE aminopropyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HTGFIP 6
+TGFIP
Sbjct: 219 YTGFIP 224


>sp|TPIS_THEAC|TRIOSEPHOSPHATE isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HTGFIPLD 8
+TG +P+D
Sbjct: 68 YTGHVPMD 75




67|Sequence|331|340|PLDTTVLKFT

>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LDTTVLKF 9
+DTT LKF
Sbjct: 1078 IDTTTLKF 1085


>sp|MTTB2_METAC|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina acetivorans (strain ATCC

Query: 1 PLDTTVLK 8
P+DT +LK
Sbjct: 472 PIDTDILK 479




68|Sequence|336|345|VLKFTKPELD

>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 LKFTKPELD 10
LKFT+P +D
Sbjct: 55 LKFTQPSID 63


>sp|IF1A3_METAC|TRANSLATION initiation factor 1A 3|Methanosarcina acetivorans (strain ATCC

Query: 1 VLKFTKPELD 10
+ K+TKP++D
Sbjct: 92 IWKYTKPQVD 101


>sp|THII_METMA|PROBABLE tRNA sulfurtransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 TKPELD 10
TKPELD
Sbjct: 96 TKPELD 101


>sp|Y2548_METHJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanospirillum

Query: 3 KFTKPEL 9
+FTKPE+
Sbjct: 194 QFTKPEM 200


>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 3 KFTKPELD 10
++T PELD
Sbjct: 507 RYTTPELD 514


>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus fulgidus

Query: 2 LKFTKPELD 10
+FTK ELD
Sbjct: 216 FRFTKRELD 224


>sp|SECF_HALVD|PROTEIN-EXPORT membrane protein SecF|Haloferax volcanii (strain ATCC 29605

Query: 1 VLKFTKPELD 10
+++FT PE+D
Sbjct: 1 MVEFTVPEVD 10


>sp|IF1A1_METMA|TRANSLATION initiation factor 1A 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VLKFTKPELD 10
+ K+T+P++D
Sbjct: 92 IWKYTRPQVD 101


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VLKFTKPEL 9
V+K +KPE+
Sbjct: 512 VMKLSKPEV 520


>sp|IF1A1_METAC|TRANSLATION initiation factor 1A 1|Methanosarcina acetivorans (strain ATCC

Query: 1 VLKFTKPELD 10
+ K+T+P++D
Sbjct: 92 IWKYTRPQVD 101


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LKFTKPELD 10
L+ KPELD
Sbjct: 253 LEVEKPELD 261


>sp|THSB_SACSH|CHAPERONIN subunit beta|Saccharolobus shibatae (strain ATCC 51178

Query: 2 LKFTKPELD 10
L+ KPELD
Sbjct: 252 LEVEKPELD 260


>sp|THSB_SULAC|CHAPERONIN subunit beta|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LKFTKPELD 10
L+ KPELD
Sbjct: 253 LEVEKPELD 261


>sp|THSB_SACS2|CHAPERONIN subunit beta|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LKFTKPELD 10
L+ KPELD
Sbjct: 252 LEVEKPELD 260


>sp|DAPB_METJA|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLKFTKPEL 9
VLK TKP++
Sbjct: 67 VLKETKPDV 75


>sp|TRM1_METS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanobrevibacter smithii

Query: 1 VLKFTKPELD 10
+LK + P+LD
Sbjct: 336 ILKISAPKLD 345


>sp|SPT5_AERPE|TRANSCRIPTION elongation factor Spt5|Aeropyrum pernix (strain ATCC 700893

Query: 1 VLKFTKPELD 10
V+K KPE++
Sbjct: 83 VMKLVKPEVE 92




69|Sequence|341|350|KPELDACDVP

>sp|CYAS_METB6|CYSTEATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 KPELDACDVP 10
KPELD D P
Sbjct: 283 KPELDMPDAP 292


>sp|HDRB_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina mazei (strain

Query: 1 KPELDACDVP 10
+ E+DACD+P
Sbjct: 29 RLEIDACDLP 38


>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ELDACDVP 10
E+DA D+P
Sbjct: 292 EVDASDIP 299


>sp|THSB_SULAC|CHAPERONIN subunit beta|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KPELDA 6
KPELDA
Sbjct: 257 KPELDA 262


>sp|KAE1_PYRAR|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum arsenaticum

Query: 4 LDACDVP 10
LDA DVP
Sbjct: 318 LDAVDVP 324


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KPELDA 6
KPELDA
Sbjct: 257 KPELDA 262


>sp|DPO4_SACS2|DNA polymerase IV|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 ELDACDVP 10
ELD DVP
Sbjct: 177 ELDIADVP 184


>sp|RNH2_METLZ|RIBONUCLEASE HII|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 LDACDV 9
LDACDV
Sbjct: 99 LDACDV 104


>sp|THSB_SACS2|CHAPERONIN subunit beta|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KPELDA 6
KPELDA
Sbjct: 256 KPELDA 261


>sp|THSB_SACSH|CHAPERONIN subunit beta|Saccharolobus shibatae (strain ATCC 51178

Query: 1 KPELDA 6
KPELDA
Sbjct: 256 KPELDA 261


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PELDACDVP 10
P ++ C++P
Sbjct: 479 PRMEVCEIP 487


>sp|RNH2_METAR|RIBONUCLEASE HII|Methanocella arvoryzae (strain DSM 22066

Query: 4 LDACDV 9
LDACDV
Sbjct: 110 LDACDV 115


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 1 KPELDACDVP 10
KP L++ D+P
Sbjct: 16 KPHLESYDIP 25


>sp|COMD_METJA|SULFOPYRUVATE decarboxylase subunit alpha|Methanocaldococcus jannaschii (strain

Query: 4 LDACDVP 10
LD C++P
Sbjct: 120 LDVCEIP 126




70|Sequence|346|355|ACDVPEKYPQ

>sp|PCNA_METS3|DNA polymerase sliding clamp|Methanobrevibacter smithii (strain ATCC

Query: 2 CDVPEK 7
CDVPEK
Sbjct: 62 CDVPEK 67


>sp|TYSY_METJA|PUTATIVE thymidylate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 VPEKYP 9
VPEKYP
Sbjct: 53 VPEKYP 58


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 2 CDVPEKYP 9
C+V EK+P
Sbjct: 383 CEVAEKHP 390


>sp|HDRB2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 ACDVPEKYP 9
C VP +YP
Sbjct: 9 GCIVPNRYP 17


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CDVPEK 7
CDVPE+
Sbjct: 227 CDVPEE 232


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 DVPEKYP 9
DVP +YP
Sbjct: 944 DVPARYP 950


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 5 PEKYP 9
PEKYP
Sbjct: 375 PEKYP 379


>sp|DYR2_HALMA|DIHYDROFOLATE reductase 2|Haloarcula marismortui (strain ATCC 43049

Query: 3 DVPEKYPQ 10
D+P +YP+
Sbjct: 22 DIPWQYPE 29


>sp|HDRB_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina mazei (strain

Query: 1 ACDVPEKYP 9
C VP +YP
Sbjct: 9 GCIVPNRYP 17


>sp|Y087_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 3 DVPEKY 8
D+P+KY
Sbjct: 2 DIPQKY 7


>sp|PUR2_METTH|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 VPEKYPQ 10
VPE YP+
Sbjct: 337 VPEGYPE 343


>sp|CSA5_THETK|CRISPR system associated protein Csa5|Thermoproteus tenax (strain ATCC

Query: 5 PEKYPQ 10
PEKYP+
Sbjct: 39 PEKYPE 44


>sp|TYSY_METKA|PUTATIVE thymidylate synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 DVPEKYP 9
D+P+ YP
Sbjct: 59 DIPDDYP 65


>sp|ENDA_METAC|TRNA-SPLICING endonuclease|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DVPEKYPQ 10
++PE YP+
Sbjct: 169 EMPEPYPE 176


>sp|PUR2_METST|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 VPEKYPQ 10
VP+KYP
Sbjct: 338 VPDKYPN 344


>sp|Y3513_METJA|MCM-LIKE protein MJECL13|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CDVPEKY 8
CD PE++
Sbjct: 95 CDYPEEF 101




71|Sequence|351|360|EKYPQLFQVT

>sp|RS17E_STAMF|SMALL ribosomal subunit protein eS17|Staphylothermus marinus (strain

Query: 1 EKYPQLF 7
EKYP LF
Sbjct: 18 EKYPNLF 24


>sp|RS17E_AERPE|SMALL ribosomal subunit protein eS17|Aeropyrum pernix (strain ATCC

Query: 1 EKYPQLF 7
EKYP LF
Sbjct: 18 EKYPDLF 24


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EKYPQLF 7
EKYP++F
Sbjct: 232 EKYPEIF 238


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 2 KYPQLFQ 8
K+PQ+FQ
Sbjct: 210 KHPQIFQ 216


>sp|Y1005_PYRIL|PROTEIN Pisl_1005|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KYPQLFQV 9
KYP+L QV
Sbjct: 122 KYPELIQV 129


>sp|URIC_HALVD|URICASE volcanii (strain ATCC 29605

Query: 1 EKYPQLFQV 9
E+YPQL V
Sbjct: 255 ERYPQLASV 263


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 1 EKYPQLFQV 9
E+ P+LF+V
Sbjct: 391 EQVPELFEV 399


>sp|Y742_METJA|UNCHARACTERIZED protein MJ0742|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKYPQLFQV 9
EKYP L+ +
Sbjct: 16 EKYPDLYDI 24


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KYPQLFQ 8
K+P+LFQ
Sbjct: 203 KHPELFQ 209


>sp|URIC_HALJB|URICASE jeotgali (strain DSM 18796

Query: 1 EKYPQLFQVT 10
E+YPQL V
Sbjct: 253 ERYPQLESVN 262


>sp|RS17E_HALWD|SMALL ribosomal subunit protein eS17|Haloquadratum walsbyi (strain DSM

Query: 1 EKYPQLFQV 9
E+YPQ F
Sbjct: 17 EEYPQAFNT 25


>sp|RS17E_THEVO|SMALL ribosomal subunit protein eS17|Thermoplasma volcanium (strain

Query: 1 EKYPQLF 7
EKYP LF
Sbjct: 18 EKYPSLF 24


>sp|PELO_THEKO|PROTEIN pelota homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EKYPQL 6
EKYP+L
Sbjct: 220 EKYPEL 225




72|Sequence|356|365|LFQVTLDVEL

>sp|CHEB_PYRHO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus

Query: 4 VTLDVEL 10
VTLDVE+
Sbjct: 57 VTLDVEM 63


>sp|CHEB_PYRAB|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus abyssi

Query: 4 VTLDVEL 10
VTLDVE+
Sbjct: 57 VTLDVEM 63


>sp|GCH3_PYRAE|GTP cyclohydrolase III|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LFQVTLDVEL 10
++QV DVEL
Sbjct: 174 IYQVLRDVEL 183




73|Sequence|361|370|LDVELQPHDK

>sp|Y941_METJA|TPR repeat-containing protein MJ0941|Methanocaldococcus jannaschii

Query: 3 VELQPHDK 10
+EL+PHDK
Sbjct: 192 LELKPHDK 199


Query: 3 VELQPH 8
+ELQPH
Sbjct: 295 IELQPH 300


>sp|MDH_THETK|MALATE dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 1 LDVELQPHDK 10
L+VEL P +K
Sbjct: 277 LEVELSPEEK 286


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DVELQPHDK 10
DVEL+P DK
Sbjct: 610 DVELEPLDK 618


>sp|TOP6B_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VELQPHDK 10
VE++PH K
Sbjct: 230 VEMKPHPK 237


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VELQPHDK 10
VE++PH K
Sbjct: 229 VEMKPHPK 236


>sp|AOCD_METJA|ORNITHINE cyclodeaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DVELQPHDK 10
+VELQP +K
Sbjct: 80 EVELQPAEK 88


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 3 VELQPHDK 10
VE++PH K
Sbjct: 229 VEMKPHPK 236


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 3 VELQPHDK 10
VE++PH K
Sbjct: 230 VEMKPHPK 237


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 3 VELQPHDK 10
VE++PH K
Sbjct: 229 VEMKPHPK 236


>sp|TOP6B_THEGJ|TYPE 2 DNA topoisomerase 6|Thermococcus gammatolerans (strain DSM 15229

Query: 3 VELQPHDK 10
VE++PH K
Sbjct: 229 VEMKPHPK 236


>sp|FLPA_SULAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Sulfolobus acidocaldarius (strain

Query: 3 VELQPHDK 10
+EL P+DK
Sbjct: 214 LELDPYDK 221


>sp|MCRD_METFE|METHYL-COENZYME M reductase operon protein|Methanothermus fervidus

Query: 1 LDVELQPH 8
+DVE+ PH
Sbjct: 1 MDVEIFPH 8


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 DVELQPHDK 10
D+EL+P D+
Sbjct: 610 DIELEPLDR 618


>sp|FTSZ1_METJA|CELL division protein FtsZ 1|Methanocaldococcus jannaschii (strain

Query: 2 DVELQPHDK 10
++EL P DK
Sbjct: 19 ELELSPEDK 27


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain

Query: 2 DVELQPHD 9
DVE QP+D
Sbjct: 82 DVEGQPND 89


>sp|FLPA_METKA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanopyrus kandleri (strain

Query: 1 LDVELQPHDK 10
+++E++PH++
Sbjct: 2 VEIEIEPHEE 11


>sp|FLPA_STAMF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Staphylothermus marinus (strain

Query: 3 VELQPHDK 10
V L+P+DK
Sbjct: 215 VHLEPYDK 222




74|Sequence|366|375|QPHDKVIDLT

>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 HDKVIDLT 10
+DK+IDLT
Sbjct: 4 YDKIIDLT 11


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 HDKVIDLT 10
+DK+IDLT
Sbjct: 4 YDKIIDLT 11


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 HDKVIDLT 10
+DK+IDLT
Sbjct: 4 YDKIIDLT 11


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 HDKVIDLT 10
+DK+IDLT
Sbjct: 4 YDKIIDLT 11


>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 HDKVIDLT 10
+DK+IDLT
Sbjct: 4 YDKIIDLT 11


>sp|RL14E_STAMF|LARGE ribosomal subunit protein eL14|Staphylothermus marinus (strain

Query: 1 QPHDKVIDLT 10
+P DKVID++
Sbjct: 55 EPLDKVIDIS 64


>sp|G6PI_HALWD|PROBABLE glucose-6-phosphate isomerase|Haloquadratum walsbyi (strain DSM

Query: 2 PHDKVIDL 9
PH+KVI L
Sbjct: 302 PHNKVITL 309


>sp|MTTB1_METAC|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina acetivorans (strain ATCC

Query: 3 HDKVIDL 9
HDKV+D+
Sbjct: 458 HDKVVDV 464


>sp|IF2P_THEPD|PROBABLE translation initiation factor IF-2|Thermofilum pendens (strain DSM

Query: 1 QPHDKVIDL 9
+ HDKV+D+
Sbjct: 521 KEHDKVLDV 529


>sp|Y089_SULAC|MEMO1 family protein Saci_0089|Sulfolobus acidocaldarius (strain ATCC

Query: 1 QPHDKVID 8
+PHDK I+
Sbjct: 201 EPHDKTIE 208


>sp|RLME_METMJ|RIBOSOMAL RNA large subunit methyltransferase|Methanoculleus marisnigri

Query: 1 QPHDKVIDL 9
+P D V+DL
Sbjct: 38 RPDDNVVDL 46


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 2 PHDKVIDL 9
P DKV++L
Sbjct: 188 PQDKVVEL 195


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 2 PHDKVIDL 9
P DKV++L
Sbjct: 188 PQDKVVEL 195


>sp|CDC69_HALSA|ORC1-TYPE DNA replication protein 9|Halobacterium salinarum (strain ATCC

Query: 2 PHDKVID 8
PHD++ID
Sbjct: 119 PHDELID 125


>sp|NEP1_METTP|RIBOSOMAL RNA small subunit methyltransferase|Methanothrix thermoacetophila

Query: 2 PHDKVIDLT 10
PH+KVI L+
Sbjct: 145 PHEKVILLS 153


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 3 HDKVIDL 9
HD++ID+
Sbjct: 353 HDEIIDI 359


>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QPHDKVIDL 9
QP DKVI L
Sbjct: 106 QPGDKVIVL 114


>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QPHDKVIDL 9
QP DKVI L
Sbjct: 106 QPGDKVIVL 114


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 QPHDKVIDL 9
QP DKVI L
Sbjct: 106 QPGDKVIVL 114


>sp|SOR_ACIAM|SULFUR oxygenase/reductase|Acidianus ambivalens (Desulfurolobus

Query: 1 QPHDKVID 8
Q HD+V+D
Sbjct: 275 QVHDEVLD 282


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PHDKVID 8
PH K++D
Sbjct: 311 PHTKIVD 317




75|Sequence|371|380|VIDLTPPWEH

>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 DLTPPWE 9
DL PPWE
Sbjct: 48 DLRPPWE 54


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 DLTPPWE 9
DL PPWE
Sbjct: 48 DLRPPWE 54


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 DLTPPWE 9
DL PPWE
Sbjct: 48 DLRPPWE 54


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 DLTPPWE 9
DL PPWE
Sbjct: 48 DLRPPWE 54


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 DLTPPWE 9
DL PPWE
Sbjct: 48 DLKPPWE 54


>sp|ASSY_THEVO|ARGININOSUCCINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LTPPWE 9
L PPWE
Sbjct: 199 LVPPWE 204


>sp|TF2B_METKA|TRANSCRIPTION initiation factor IIB|Methanopyrus kandleri (strain AV19 /

Query: 1 VIDLTPPWEH 10
VID P W H
Sbjct: 45 VIDPGPEWRH 54


>sp|ENGB_ARCFU|PROBABLE GTP-binding protein EngB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VIDLTPPWE 9
++ + PPWE
Sbjct: 149 MLGMQPPWE 157


>sp|SFSA_PYRAR|SUGAR fermentation stimulation protein homolog|Pyrobaculum arsenaticum

Query: 2 IDLTPPW 8
+DLTPP+
Sbjct: 226 VDLTPPF 232


>sp|TRPF_SACS2|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IDLTPPW 8
IDL P W
Sbjct: 164 IDLNPAW 170


>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VIDLTPPWEH 10
VID T P EH
Sbjct: 98 VIDDTEPEEH 107


>sp|TRMI_METJA|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 1 VIDLTPPW 8
V+DL PW
Sbjct: 186 VLDLPDPW 193


>sp|Y1408_METJA|UNCHARACTERIZED protein MJ1408|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VIDLTPP 7
VID TPP
Sbjct: 68 VIDKTPP 74


>sp|TF2B_PYRWO|TRANSCRIPTION initiation factor IIB|Pyrococcus woesei

Query: 1 VIDLTPPW 8
+ID+ P W
Sbjct: 37 IIDMGPEW 44


>sp|TF2B_PYRHO|TRANSCRIPTION initiation factor IIB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VIDLTPPW 8
+ID+ P W
Sbjct: 37 IIDMGPEW 44


>sp|TF2B_PYRFU|TRANSCRIPTION initiation factor IIB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VIDLTPPW 8
+ID+ P W
Sbjct: 37 IIDMGPEW 44


>sp|FEN_NANEQ|FLAP endonuclease 1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VIDLTPPW 8
VID P W
Sbjct: 284 VIDFEPKW 291


>sp|QUEC_METPE|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 IDLTPPWEH 10
+DL P+EH
Sbjct: 175 LDLGVPYEH 183


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VIDLTPPWEH 10
V DL P ++H
Sbjct: 297 VTDLAPGYDH 306


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VIDLTPPWEH 10
V DL P ++H
Sbjct: 297 VTDLAPGYDH 306


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 VIDLTPPWEH 10
V DL P ++H
Sbjct: 297 VTDLAPGYDH 306


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 VIDLTPPWEH 10
V DL P ++H
Sbjct: 297 VTDLAPGYDH 306


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 VIDLTPPWEH 10
V DL P ++H
Sbjct: 297 VTDLAPGYDH 306


>sp|PUR7_METMJ|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 LTPPW 8
L+PPW
Sbjct: 233 LSPPW 237


>sp|THIC_SULAC|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VIDLTPPWEH 10
VID+ P++H
Sbjct: 297 VIDVGAPYDH 306


>sp|ENGB_METMA|PROBABLE GTP-binding protein EngB|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IDLTPPWEH 10
+ L PPW++
Sbjct: 163 LGLEPPWQN 171


>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 6 PPWE 9
PPWE
Sbjct: 308 PPWE 311


>sp|HEM3_AERPE|PROBABLE porphobilinogen deaminase|Aeropyrum pernix (strain ATCC 700893

Query: 6 PPWEH 10
PPW H
Sbjct: 220 PPWWH 224


>sp|Y408_ARCFU|UNCHARACTERIZED protein AF_0408|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IDLTPPWE 9
+ LTP W+
Sbjct: 169 LQLTPAWD 176


>sp|ENGB_HALSA|PROBABLE GTP-binding protein EngB|Halobacterium salinarum (strain ATCC

Query: 4 LTPPWEH 10
L PPWE
Sbjct: 161 LYPPWEQ 167


>sp|ENGB_HALS3|PROBABLE GTP-binding protein EngB|Halobacterium salinarum (strain ATCC 29341

Query: 4 LTPPWEH 10
L PPWE
Sbjct: 161 LYPPWEQ 167


>sp|Y178_METBF|UPF0284 protein Mbar_A0178|Methanosarcina barkeri (strain Fusaro /

Query: 1 VIDLTPPWE 9
V+ +TPP++
Sbjct: 63 VLPMTPPYD 71


>sp|MPTE_PYRFU|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DLTPPWE 9
D TP WE
Sbjct: 196 DHTPAWE 202


>sp|Y708_METMA|UPF0284 protein MM_0708|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VIDLTPPWE 9
V+ +TPP++
Sbjct: 63 VLPMTPPYD 71


>sp|Y3887_METAC|UPF0284 protein MA_3887|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VIDLTPPWE 9
V+ +TPP++
Sbjct: 63 VLPMTPPYD 71


>sp|MTNA_SULAC|PUTATIVE methylthioribose-1-phosphate isomerase|Sulfolobus acidocaldarius

Query: 1 VIDLTPP 7
V D+TPP
Sbjct: 334 VFDVTPP 340


>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 IDLTPPWE 9
ID+ P W+
Sbjct: 191 IDMRPDWD 198




76|Sequence|376|385|PPWEHYCTKD

>sp|GPN_PYRAB|GPN-LOOP GTPase PAB0955|Pyrococcus abyssi (strain GE5 /

Query: 3 WEHYCT 8
+EHYCT
Sbjct: 238 YEHYCT 243


>sp|NADA_METB6|QUINOLINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 PWEHYC 7
PWE +C
Sbjct: 167 PWEGFC 172


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 WEHYCT 8
WE +CT
Sbjct: 831 WEQHCT 836


>sp|FNO_ARCFU|F420-DEPENDENT NADP reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PWEH 5
PWEH
Sbjct: 73 PWEH 76


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WEHYC 7
+EHYC
Sbjct: 1710 YEHYC 1714


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WEHY 6
WEHY
Sbjct: 1103 WEHY 1106


>sp|ARCH_PYRHO|PROTEIN archease|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WEHY 6
WEHY
Sbjct: 4 WEHY 7


>sp|NADM_METMJ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PWEH 5
PWEH
Sbjct: 139 PWEH 142


>sp|THYX_AERPE|FLAVIN-DEPENDENT thymidylate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PWEH 5
PWEH
Sbjct: 66 PWEH 69


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 EHYCTKD 10
EH C KD
Sbjct: 541 EHTCCKD 547


>sp|YBP3_ACIAM|UNCHARACTERIZED 17.7 kDa protein in|Acidianus ambivalens (Desulfurolobus

Query: 2 PWEHYCTKD 10
P E Y TKD
Sbjct: 67 PVEKYMTKD 75


>sp|ARCH_PYRFU|PROTEIN archease|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WEHY 6
WEHY
Sbjct: 4 WEHY 7


>sp|ARCH_THEGJ|PROTEIN archease|Thermococcus gammatolerans (strain DSM 15229

Query: 3 WEHY 6
WEHY
Sbjct: 4 WEHY 7


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WEHYCTKD 10
WEH+ D
Sbjct: 874 WEHFALYD 881


>sp|Y1280_METJA|UNCHARACTERIZED protein MJ1280|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HYCTKD 10
HY TKD
Sbjct: 61 HYVTKD 66


>sp|Y280_METSM|UPF0280 protein ORFE|Methanobrevibacter smithii

Query: 4 EHYCTKD 10
EHY TK+
Sbjct: 35 EHYITKN 41


>sp|Y088_METS3|UPF0280 protein Msm_0088|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 EHYCTKD 10
EHY TK+
Sbjct: 36 EHYITKN 42


>sp|ARCH_PYRAB|PROTEIN archease|Pyrococcus abyssi (strain GE5 /

Query: 3 WEHY 6
WEHY
Sbjct: 4 WEHY 7


>sp|TF2B2_SACS2|TRANSCRIPTION initiation factor IIB 2|Saccharolobus solfataricus (strain ATCC

Query: 1 PPWEHYCTKD 10
P W Y KD
Sbjct: 39 PDWRAYNAKD 48


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 3 WEHY 6
WEHY
Sbjct: 440 WEHY 443


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 PPWEHYC 7
P W YC
Sbjct: 388 PKWNPYC 394


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 3 WEHY 6
WEHY
Sbjct: 440 WEHY 443


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 3 WEHY 6
WEHY
Sbjct: 440 WEHY 443


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 3 WEHY 6
WEHY
Sbjct: 441 WEHY 444


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PWEHY 6
PWE Y
Sbjct: 274 PWERY 278




77|Sequence|381|390|YCTKDVNPSI

>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YCTKDVNP 8
YC D NP
Sbjct: 178 YCPHDQNP 185


>sp|Y931_METLZ|UPF0212 protein Mlab_0931|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 YCTKDVNPSI 10
YC K++N ++
Sbjct: 53 YCGKEINTAL 62


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TKDVNPSI 10
TK++NP++
Sbjct: 405 TKEINPNV 412


>sp|SAHH_THEKO|ADENOSYLHOMOCYSTEINASE kodakarensis (strain ATCC BAA-918

Query: 1 YCTKDVN 7
YC KD++
Sbjct: 7 YCVKDIS 13


>sp|SAHH_PYRAB|ADENOSYLHOMOCYSTEINASE abyssi (strain GE5 /

Query: 1 YCTKDVN 7
YC KD++
Sbjct: 8 YCVKDIS 14


>sp|DPH2_METJA|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KDVNPSI 10
KD NPSI
Sbjct: 163 KDFNPSI 169


>sp|PRIL_THEVO|DNA primase large subunit PriL|Thermoplasma volcanium (strain ATCC

Query: 1 YCTKDV 6
YC KDV
Sbjct: 149 YCQKDV 154


>sp|Y164_METJA|UNCHARACTERIZED protein MJ0164|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KDVNPSI 10
KD++PSI
Sbjct: 364 KDIDPSI 370




78|Sequence|386|395|VNPSILFSSH

>sp|HCP_METMA|HYDROXYLAMINE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NPSILFSSH 10
NP IL S H
Sbjct: 228 NPGILISGH 236


>sp|Y1479_METJA|UNCHARACTERIZED aminotransferase MJ1479|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VNPSILFSSH 10
+NPS +S+H
Sbjct: 123 INPSPSYSTH 132


>sp|Y1851_PYRFU|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus furiosus

Query: 1 VNPSILFS 8
VNP LFS
Sbjct: 98 VNPETLFS 105


>sp|KADA_SULAC|ADENYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VNPSILF 7
+NPS++F
Sbjct: 114 INPSVIF 120


>sp|G3P_PICTO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 VNPSILFSSH 10
+ PS+ F SH
Sbjct: 182 IEPSMSFPSH 191


>sp|Y091_METJA|UNCHARACTERIZED membrane protein MJ0091|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NPSILFS 8
NPS++FS
Sbjct: 158 NPSVVFS 164




79|Sequence|391|400|LFSSHQEHQD

>sp|PYRC_METJA|DIHYDROOROTASE jannaschii (strain ATCC 43067

Query: 1 LFSSHQEHQD 10
LF H EH+D
Sbjct: 164 LFCIHAEHKD 173


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LFSSHQEHQ 9
LF+ H EH+
Sbjct: 466 LFTIHAEHE 474




80|Sequence|396|405|QEHQDTLALG

>sp|ARLY_META3|ARGININOSUCCINATE lyase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QEHQDTLALG 10
+EH++TL +G
Sbjct: 149 KEHKETLTIG 158


>sp|NNR_KORCO|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Korarchaeum cryptofilum (strain

Query: 2 EHQDTLALG 10
E QD +ALG
Sbjct: 313 EEQDVVALG 321


>sp|ARLY_METM6|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C6 /

Query: 1 QEHQDTLALG 10
+EH++TL +G
Sbjct: 144 REHKETLTVG 153


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QEHQDTLALG 10
+EH TL+LG
Sbjct: 215 KEHDVTLSLG 224


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 QEHQDTLALG 10
+EH TL+LG
Sbjct: 215 KEHDVTLSLG 224


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 QEHQDTLALG 10
+EH TL+LG
Sbjct: 215 KEHDVTLSLG 224


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 QEHQDTLALG 10
+EH TL+LG
Sbjct: 215 KEHDVTLSLG 224


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 QEHQDTLALG 10
+EH TL+LG
Sbjct: 215 KEHDVTLSLG 224


>sp|ARLY_METM7|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C7 /

Query: 2 EHQDTLALG 10
EH++TL +G
Sbjct: 145 EHKETLTVG 153


>sp|ARLY_METM5|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C5 /

Query: 2 EHQDTLALG 10
EH++TL +G
Sbjct: 145 EHKETLTVG 153


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QEHQDTLALG 10
+EH TL+LG
Sbjct: 215 KEHDVTLSLG 224


>sp|THIC_METKA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 QEHQDTLALG 10
+EH TL+LG
Sbjct: 216 REHDVTLSLG 225


>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 QEHQDTLALG 10
+EH TL+LG
Sbjct: 215 KEHDVTLSLG 224




81|Sequence|401|410|TLALGGQAPI

>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 GGQAPI 10
GGQAPI
Sbjct: 417 GGQAPI 422


>sp|GADH_PICTO|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Picrophilus torridus (strain ATCC 700027

Query: 2 LALGGQAP 9
L LGG+AP
Sbjct: 244 LELGGKAP 251


>sp|DSRA_ARCFU|SULFITE reductase, dissimilatory-type subunit alpha|Archaeoglobus fulgidus

Query: 1 TLALGGQAP 9
T+ +GG+AP
Sbjct: 309 TILIGGKAP 317


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 TLALGGQAP 9
+++LGG AP
Sbjct: 454 SMSLGGNAP 462


>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LALGGQAP 9
L LGG+AP
Sbjct: 246 LELGGKAP 253


>sp|CARA_SACS2|CARBAMOYL phosphate synthase small chain|Saccharolobus solfataricus (strain

Query: 1 TLALGGQ 7
TLALGG+
Sbjct: 265 TLALGGK 271


>sp|BACS_HALSD|SENSORY rhodopsin|Halorubrum sodomense

Query: 3 ALGGQAPI 10
A+GG+AP+
Sbjct: 236 AVGGEAPV 243


>sp|RLME_METTP|RIBOSOMAL RNA large subunit methyltransferase|Methanothrix thermoacetophila

Query: 3 ALGGQAPI 10
ALGGQA +
Sbjct: 97 ALGGQADV 104




82|Sequence|406|415|GQAPIDIPPD

>sp|RPO1N_HALMO|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halococcus morrhuae (Micrococcus

Query: 1 GQAPIDIP 8
G APID+P
Sbjct: 337 GAAPIDVP 344


>sp|RL1_AERPE|LARGE ribosomal subunit protein uL1|Aeropyrum pernix (strain ATCC 700893

Query: 1 GQAPIDIPPD 10
G+AP+ +PP+
Sbjct: 131 GKAPVPVPPN 140


>sp|AATE_METMJ|A-TYPE ATP synthase subunit E|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 APIDIP 8
AP+DIP
Sbjct: 148 APVDIP 153


>sp|HIS8_PYRFU|HISTIDINOL-PHOSPHATE aminotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QAPIDIPP 9
++P D+PP
Sbjct: 27 ESPYDLPP 34


>sp|MUTS2_PYRFU|DNA-BINDING protein MutS2|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PIDIPPD 10
P+++PP+
Sbjct: 266 PVEVPPE 272


>sp|PGK_SULAC|PHOSPHOGLYCERATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 APIDIPPD 10
API+IP D
Sbjct: 276 APIEIPVD 283


>sp|RL30_AERPE|LARGE ribosomal subunit protein uL30|Aeropyrum pernix (strain ATCC

Query: 2 QAPIDIPPD 10
+ +D+PPD
Sbjct: 10 RGTVDVPPD 18


>sp|Y666_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0666|Methanocaldococcus

Query: 2 QAPIDIP 8
+APID+P
Sbjct: 49 KAPIDLP 55


>sp|AMPPA_HYPBU|AMP phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 4 PIDIPP 9
PID+PP
Sbjct: 82 PIDVPP 87


>sp|RL18_METTH|LARGE ribosomal subunit protein uL18|Methanothermobacter

Query: 1 GQAPIDIP 8
G +P+D+P
Sbjct: 171 GLSPVDLP 178


>sp|PGK_METS5|PHOSPHOGLYCERATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 3 APIDIPPD 10
AP++IP D
Sbjct: 270 APVEIPVD 277


>sp|ARGJ_METKA|GLUTAMATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 GQAPIDIPPD 10
G A +D+ PD
Sbjct: 308 GAARVDVDPD 317


>sp|NFI_HALSA|ENDONUCLEASE V|Halobacterium salinarum (strain ATCC 700922

Query: 1 GQAPIDIP 8
G AP+D+P
Sbjct: 99 GNAPLDVP 106


>sp|DNLI_METAR|DNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GQAPIDIP 8
GQ+ ID+P
Sbjct: 349 GQSTIDLP 356


>sp|PGK_SACS2|PHOSPHOGLYCERATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 APIDIPPD 10
API+IP D
Sbjct: 272 APIEIPVD 279


>sp|RL30_STAMF|LARGE ribosomal subunit protein uL30|Staphylothermus marinus (strain

Query: 5 IDIPPD 10
+D+PPD
Sbjct: 14 LDVPPD 19


>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 APIDIPPD 10
API+IP D
Sbjct: 276 APIEIPVD 283


>sp|RIFK_HALSA|RIBOFLAVIN kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GQAPIDIPPD 10
G +D+PPD
Sbjct: 137 GTLNVDLPPD 146


>sp|SYFA_PYRAR|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 QAPIDIPPD 10
+ PI+ PP+
Sbjct: 274 EGPIEAPPE 282


>sp|RL1_HYPBU|LARGE ribosomal subunit protein uL1|Hyperthermus butylicus (strain DSM

Query: 1 GQAPIDIPPD 10
G+ PI +PP+
Sbjct: 130 GKVPIPVPPN 139




83|Sequence|411|420|DIPPDNPRHY

>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 3 PPDNPR 8
PPDNPR
Sbjct: 742 PPDNPR 747


>sp|PPS_METMA|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DIPPDNPRH 9
DIP D+PR+
Sbjct: 3 DIPHDHPRY 11


>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DIPPDN 6
D+PPDN
Sbjct: 318 DLPPDN 323


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 1 DIPPDNPRH 9
++PP PRH
Sbjct: 216 ELPPSRPRH 224


>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DIPPDNP 7
++PPD+P
Sbjct: 185 NVPPDSP 191


>sp|AOCD_METJA|ORNITHINE cyclodeaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IPPDNPR 8
IPP+ PR
Sbjct: 157 IPPEKPR 163


>sp|COFD_HALSA|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DIPPDNPRH 9
DI PD PR+
Sbjct: 86 DIDPDTPRY 94


>sp|COFD_HALS3|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DIPPDNPRH 9
DI PD PR+
Sbjct: 86 DIDPDTPRY 94


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PDNPRH 9
PDNP H
Sbjct: 360 PDNPLH 365


>sp|HPPA_PYRAE|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Pyrobaculum aerophilum (strain

Query: 2 IPPDNPRH 9
IP D+PR+
Sbjct: 207 IPEDDPRN 214


>sp|HPPA2_METMA|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Methanosarcina mazei (strain

Query: 2 IPPDNPRH 9
IP D+PR+
Sbjct: 194 IPEDDPRN 201


>sp|HPPA2_METAC|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Methanosarcina acetivorans

Query: 2 IPPDNPRH 9
IP D+PR+
Sbjct: 194 IPEDDPRN 201


>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 2 IPPDNPRH 9
IP D+PR+
Sbjct: 204 IPEDDPRN 211


>sp|HPPA1_METAC|PUTATIVE K(+)-stimulated pyrophosphate-energized sodium pump|Methanosarcina

Query: 2 IPPDNPRH 9
IP D+PR+
Sbjct: 204 IPEDDPRN 211


>sp|ATGT_NANEQ|TRNA-GUANINE(15) transglycosylase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DIPPDNPRH 9
DIP D P H
Sbjct: 210 DIPRDRPVH 218


>sp|HEM1_HALWD|GLUTAMYL-TRNA reductase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DIPPDNPRH 9
D+P D P H
Sbjct: 438 DLPDDVPNH 446


>sp|CYSC_AERPE|PROBABLE adenylyl-sulfate kinase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PPDNPR 8
PP+NP+
Sbjct: 152 PPENPQ 157


>sp|PHR_METTH|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DIPPDNPRHY 10
D P N RHY
Sbjct: 61 DFPNANSRHY 70


>sp|GYAR_KORCO|GLYOXYLATE reductase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 IPPDNP 7
IPPD+P
Sbjct: 269 IPPDDP 274


>sp|COME_METTH|SULFOPYRUVATE decarboxylase subunit beta|Methanothermobacter thermautotrophicus

Query: 5 DNPRHY 10
D+PRH+
Sbjct: 37 DSPRHF 42


>sp|AOCD_METTH|ORNITHINE cyclodeaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 IPPDNPR 8
+PP+ PR
Sbjct: 157 VPPERPR 163


>sp|AOCD_ARCFU|ORNITHINE cyclodeaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IPPDNPR 8
+PP+ PR
Sbjct: 155 VPPERPR 161


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PPDNPR 8
PPD PR
Sbjct: 134 PPDAPR 139


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 3 PPDNPR 8
PPD PR
Sbjct: 130 PPDAPR 135


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 IPPDNPRHY 10
IPPD R+Y
Sbjct: 352 IPPDYLRYY 360


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PPDNPR 8
PPD PR
Sbjct: 134 PPDAPR 139


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PPDNPR 8
PPD PR
Sbjct: 130 PPDAPR 135


>sp|TBPD_HALSA|TATA-BOX-BINDING protein D|Halobacterium salinarum (strain ATCC 700922

Query: 1 DIPPDNPRH 9
DIPP P H
Sbjct: 92 DIPPSPPVH 100


>sp|PYLD_METAC|PYRROLYSINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PDNPRHY 10
P+NPR +
Sbjct: 191 PENPRRF 197


>sp|RIFK_HALSA|RIBOFLAVIN kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DIPPDNPR 8
D+PPD R
Sbjct: 142 DLPPDGQR 149


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 PPDNPRH 9
PPD+P +
Sbjct: 512 PPDSPEY 518


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 3 PPDNPR 8
PPD PR
Sbjct: 129 PPDAPR 134


>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 2 IPPDNPRHY 10
I PD+P H+
Sbjct: 138 IGPDSPAHH 146


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 1 DIPPDNPRH 9
++PPD +H
Sbjct: 399 EVPPDARKH 407


>sp|ADEC_METB6|ADENINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 5 DNPRHY 10
D+PRH+
Sbjct: 330 DDPRHF 335


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 IPPDNPRHY 10
I PD P+++
Sbjct: 31 IEPDKPKYF 39


>sp|TRPF_HALVD|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Haloferax volcanii (strain ATCC 29605

Query: 1 DIPPDNPR 8
D+P D PR
Sbjct: 31 DVPVDTPR 38




84|Sequence|416|425|NPRHYGQSGF

>sp|RL15_METS3|LARGE ribosomal subunit protein uL15|Methanobrevibacter smithii (strain

Query: 1 NPRHYGQSGF 10
+P HYG+ GF
Sbjct: 51 DPDHYGKHGF 60


>sp|RL15_METVS|LARGE ribosomal subunit protein uL15|Methanococcus vannielii (strain

Query: 1 NPRHYGQSGF 10
NP ++G+ GF
Sbjct: 51 NPEYFGKYGF 60


>sp|RL15_METVA|LARGE ribosomal subunit protein uL15|Methanococcus vannielii

Query: 1 NPRHYGQSGF 10
NP ++G+ GF
Sbjct: 51 NPEYFGKYGF 60


>sp|TSR3_VULDI|16S rRNA aminocarboxypropyltransferase|Vulcanisaeta distributa (strain

Query: 1 NPRHYGQ 7
NP HYG+
Sbjct: 100 NPTHYGK 106


>sp|RL15_METM5|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 1 NPRHYGQSGF 10
NP ++G+ GF
Sbjct: 51 NPDYFGKYGF 60


>sp|RL15_METMP|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 1 NPRHYGQSGF 10
NP ++G+ GF
Sbjct: 51 NPDYFGKYGF 60


>sp|RL15_METM6|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 1 NPRHYGQSGF 10
NP ++G+ GF
Sbjct: 51 NPDYFGKYGF 60


>sp|RL15_METM7|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 1 NPRHYGQSGF 10
NP ++G+ GF
Sbjct: 51 NPDYFGKYGF 60


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PRHYGQS 8
PR YG+S
Sbjct: 12 PREYGES 18


>sp|MDH_METBF|MALATE dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 4 HYGQSG 9
HYGQ G
Sbjct: 256 HYGQEG 261


>sp|SRP54_NATPD|SIGNAL recognition particle 54 kDa|Natronomonas pharaonis (strain ATCC

Query: 1 NPRHYGQS 8
NPR GQS
Sbjct: 389 NPRAIGQS 396


>sp|TOP6B_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 1 NPRHYGQ 7
N RHYG+
Sbjct: 290 NDRHYGR 296


>sp|Y4269_METAC|UPF0215 protein MA_4269|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NPRHYGQ 7
N RHY Q
Sbjct: 64 NSRHYAQ 70


>sp|RL15_PYRHO|LARGE ribosomal subunit protein uL15|Pyrococcus horikoshii (strain ATCC

Query: 2 PRHYGQSGF 10
P H G+ GF
Sbjct: 55 PDHLGKRGF 63


>sp|RL15_PYRAB|LARGE ribosomal subunit protein uL15|Pyrococcus abyssi (strain GE5 /

Query: 2 PRHYGQSGF 10
P H G+ GF
Sbjct: 55 PDHLGKRGF 63


>sp|RL15_THEVO|LARGE ribosomal subunit protein uL15|Thermoplasma volcanium (strain

Query: 1 NPRHYGQSGF 10
+P H+G GF
Sbjct: 47 DPLHFGGKGF 56


>sp|RL15_THEAC|LARGE ribosomal subunit protein uL15|Thermoplasma acidophilum (strain

Query: 1 NPRHYGQSGF 10
+P H+G GF
Sbjct: 47 DPLHFGGKGF 56


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 RHYGQSG 9
RHY +SG
Sbjct: 435 RHYKESG 441


>sp|GPMA_METHJ|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanospirillum hungatei JF-1 (strain

Query: 1 NPRHYG 6
N RHYG
Sbjct: 86 NERHYG 91


>sp|RL15_METKA|LARGE ribosomal subunit protein uL15|Methanopyrus kandleri (strain AV19

Query: 2 PRHYGQSGF 10
P H+G+ GF
Sbjct: 54 PDHFGKRGF 62


>sp|RL15_PYRFU|LARGE ribosomal subunit protein uL15|Pyrococcus furiosus (strain ATCC

Query: 2 PRHYGQSGF 10
P H G+ GF
Sbjct: 55 PDHLGKRGF 63


>sp|TDXH_METMP|PEROXIREDOXIN maripaludis (strain DSM 14266

Query: 2 PRHYGQSG 9
P HY +SG
Sbjct: 23 PEHYIESG 30


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 4 HYGQS 8
HYGQS
Sbjct: 220 HYGQS 224


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 4 HYGQS 8
HYGQS
Sbjct: 220 HYGQS 224


>sp|GPMA_METPE|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 1 NPRHYG 6
N RHYG
Sbjct: 86 NERHYG 91


>sp|RL15_AERPE|LARGE ribosomal subunit protein uL15|Aeropyrum pernix (strain ATCC

Query: 2 PRHYGQSGF 10
P YG+ GF
Sbjct: 54 PTWYGKKGF 62


>sp|GPMA_METB6|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanoregula boonei (strain DSM 21154

Query: 1 NPRHYG 6
N RHYG
Sbjct: 86 NERHYG 91


>sp|Y119_PYRAB|UPF0173 protein PYRAB01190|Pyrococcus abyssi (strain GE5 /

Query: 2 PRHYGQSG 9
P HYG G
Sbjct: 172 PMHYGTYG 179


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 2 PRHYGQSGF 10
PR Y + GF
Sbjct: 175 PRIYAEEGF 183


>sp|Y120_PYRHO|UPF0173 protein PH0120|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PRHYGQSG 9
P HYG G
Sbjct: 172 PMHYGTYG 179




85|Sequence|421|430|GQSGFFASLC

>sp|LEU3_SACS2|3-ISOPROPYLMALATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GFFASLC 10
G FAS+C
Sbjct: 179 GLFASVC 185


>sp|SECY_HALVD|PROTEIN translocase subunit SecY|Haloferax volcanii (strain ATCC 29605

Query: 1 GQSGFFAS 8
G SGFFA+
Sbjct: 210 GTSGFFAT 217




86|Sequence|426|435|FASLCWQDQK

>sp|BIOW_METRM|6-CARBOXYHEXANOATE--COA ligase|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 ASLCWQD 8
A LCW D
Sbjct: 189 AELCWSD 195


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FASLCWQDQK 10
F +L WQD +
Sbjct: 88 FNALGWQDMR 97


>sp|Y745_PYRAE|PROTEIN PAE0745|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 CWQDQK 10
CW D+K
Sbjct: 174 CWLDKK 179


>sp|TRPD_HALLT|ANTHRANILATE phosphoribosyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 1 FASLCWQDQ 9
FA+LC D+
Sbjct: 327 FAALCGDDE 335


>sp|FWDF_METJA|POLYFERREDOXIN protein FwdF|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LCWQDQ 9
LCW D+
Sbjct: 26 LCWNDE 31




87|Sequence|431|440|WQDQKSEKSF

>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WQDQKSEKSF 10
WQ KSE++F
Sbjct: 69 WQTPKSEEAF 78


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WQDQKSEK 8
W+D K+EK
Sbjct: 215 WEDGKTEK 222


>sp|ACYP_PYRFU|ACYLPHOSPHATASE furiosus (strain ATCC 43587

Query: 1 WQDQKSEKSF 10
W++ K EK F
Sbjct: 78 WEEPKGEKGF 87


>sp|ACYP_PYRAB|ACYLPHOSPHATASE abyssi (strain GE5 /

Query: 1 WQDQKSEKSF 10
W++ K EK F
Sbjct: 78 WEEPKGEKGF 87




88|Sequence|436|445|SEKSFCEEDH

>sp|KCY_METHJ|CYTIDYLATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 SFCEED 9
SFCEED
Sbjct: 51 SFCEED 56


>sp|CAS1B_METHJ|PUTATIVE CRISPR-associated endonuclease Cas1 2|Methanospirillum hungatei

Query: 4 SFCEED 9
SFCE D
Sbjct: 58 SFCESD 63


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KSFCEE 8
K FCEE
Sbjct: 324 KEFCEE 329


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 SEKSFCEED 9
S++++CE D
Sbjct: 122 SKQAYCEHD 130




89|Sequence|441|450|CEEDHAALVN

>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 EEDHAAL 8
EEDHA L
Sbjct: 613 EEDHARL 619


>sp|SYS_IGNH4|SERINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 CEEDH 5
C+EDH
Sbjct: 117 CDEDH 121


>sp|IF6_PICTO|TRANSLATION initiation factor 6|Picrophilus torridus (strain ATCC 700027

Query: 4 DHAALVN 10
DHAAL++
Sbjct: 106 DHAALIH 112


>sp|MRE11_HALSA|DNA double-strand break repair protein|Halobacterium salinarum (strain

Query: 2 EEDHAALVN 10
+ DHAALV+
Sbjct: 141 DADHAALVS 149




90|Sequence|446|455|AALVNQESEQ

***** No hits found ******


91|Sequence|451|460|QESEQSDDEL

>sp|RS9_AERPE|SMALL ribosomal subunit protein uS9|Aeropyrum pernix (strain ATCC 700893

Query: 4 EQSDDEL 10
E+SDDEL
Sbjct: 96 EESDDEL 102




92|Sequence|456|465|SDDELLTLSS

>sp|TRIN_SULTO|PUTATIVE Tricorn-like protease N-terminal subunit|Sulfurisphaera tokodaii

Query: 1 SDDELLTLS 9
SDDE+L L+
Sbjct: 115 SDDEILVLT 123


>sp|VHCA_METVO|F420-NON-REDUCING hydrogenase vhc subunit A|Methanococcus voltae

Query: 3 DELLTLS 9
DELLTLS
Sbjct: 182 DELLTLS 188




93|Sequence|461|470|LTLSSPHGNA

>sp|RS8_STAMF|SMALL ribosomal subunit protein uS8|Staphylothermus marinus (strain ATCC

Query: 1 LTLSSPHG 8
L LS+PHG
Sbjct: 105 LILSTPHG 112


>sp|CAS6L_PYRHO|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6nc|Pyrococcus

Query: 3 LSSPHG 8
LSSPHG
Sbjct: 43 LSSPHG 48


>sp|Y4020_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 TLSSPHGNA 10
TLSS +GNA
Sbjct: 5 TLSSSYGNA 13


>sp|MFNA_METS3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanobrevibacter smithii

Query: 1 LTLSSPHGN 9
L++S P+GN
Sbjct: 78 LSISEPYGN 86


>sp|MFNA_HALSA|PROBABLE L-aspartate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 3 LSSPHG 8
LSSPHG
Sbjct: 66 LSSPHG 71


>sp|MFNA_HALS3|PROBABLE L-aspartate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 3 LSSPHG 8
LSSPHG
Sbjct: 66 LSSPHG 71


>sp|PORB_METTH|PYRUVATE synthase subunit PorB|Methanothermobacter thermautotrophicus

Query: 2 TLSSPHG 8
T +SPHG
Sbjct: 144 TTTSPHG 150


>sp|PORB_METTM|PYRUVATE synthase subunit PorB|Methanothermobacter marburgensis (strain ATCC

Query: 2 TLSSPHG 8
T +SPHG
Sbjct: 144 TTTSPHG 150


>sp|RL1_METHJ|LARGE ribosomal subunit protein uL1|Methanospirillum hungatei JF-1

Query: 2 TLSSPHGNA 10
T+ PHGN
Sbjct: 48 TILLPHGNG 56


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TLSSPHG 8
TLSSP+G
Sbjct: 1023 TLSSPNG 1029




94|Sequence|466|475|PHGNANGDKP

>sp|Y635_METJA|UNCHARACTERIZED protein MJ0635|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GNANGDK 9
GNANG+K
Sbjct: 75 GNANGEK 81


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GNANGDKP 10
GNA GD P
Sbjct: 164 GNARGDGP 171


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GNANGDKP 10
GNA GD P
Sbjct: 162 GNARGDGP 169


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 HGNANGD 8
H NA+GD
Sbjct: 285 HANADGD 291


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HGNANGDK 9
HG NGD+
Sbjct: 368 HGMYNGDR 375


>sp|UVRB_METAC|UVRABC system protein B|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HGNANGDK 9
HG NGD+
Sbjct: 368 HGMYNGDR 375


>sp|RS12_METMP|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain

Query: 1 PHGNANGDKP 10
P G A GD P
Sbjct: 111 PSGQAKGDIP 120


>sp|RS12_METM7|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain C7

Query: 1 PHGNANGDKP 10
P G A GD P
Sbjct: 111 PSGQAKGDIP 120


>sp|RS12_METM5|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain C5

Query: 1 PHGNANGDKP 10
P G A GD P
Sbjct: 111 PSGQAKGDIP 120


>sp|T1MH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 1 PHGNAN 6
P+GNAN
Sbjct: 358 PNGNAN 363


>sp|RS12_THEPD|SMALL ribosomal subunit protein uS12|Thermofilum pendens (strain DSM 2475

Query: 1 PHGNANGDKP 10
P G A GD P
Sbjct: 111 PEGRAYGDLP 120


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HGNANGD 8
H NA GD
Sbjct: 285 HANAEGD 291


>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 2 HGNANG 7
HG+ANG
Sbjct: 29 HGSANG 34


>sp|RL10E_SULAC|LARGE ribosomal subunit protein uL16|Sulfolobus acidocaldarius (strain

Query: 3 GNANGD 8
GN NGD
Sbjct: 37 GNVNGD 42


>sp|RS12_METVS|SMALL ribosomal subunit protein uS12|Methanococcus vannielii (strain ATCC

Query: 1 PHGNANGDKP 10
P G A GD P
Sbjct: 111 PSGQAKGDIP 120


>sp|RS12_METKA|SMALL ribosomal subunit protein uS12|Methanopyrus kandleri (strain AV19 /

Query: 1 PHGNANGDKP 10
P G A GD P
Sbjct: 111 PKGRAKGDIP 120


>sp|RS12_META3|SMALL ribosomal subunit protein uS12|Methanococcus aeolicus (strain ATCC

Query: 1 PHGNANGDKP 10
P G A GD P
Sbjct: 111 PSGQAKGDIP 120


>sp|COFG_ARCFU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HGNANGDKP 10
H N+ G KP
Sbjct: 133 HANSPGKKP 141




95|Sequence|471|480|NGDKPHGVKK

>sp|DGGGP_KORCO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GDKPHGVK 9
GD+ HGV+
Sbjct: 181 GDRAHGVR 188


>sp|G1PDH_HYPBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Hyperthermus butylicus (strain DSM 5456

Query: 3 DKPHGVK 9
DKPH V+
Sbjct: 135 DKPHSVR 141


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NGDKPHGVK 9
+GD+P GV+
Sbjct: 294 DGDEPQGVE 302


>sp|G1PDH_CENSY|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Cenarchaeum symbiosum (strain A)

Query: 2 GDKPHGV 8
GDKPH +
Sbjct: 141 GDKPHSI 147


>sp|RFCS_PICTO|REPLICATION factor C small subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 NGDKPH 6
NGD PH
Sbjct: 33 NGDLPH 38


>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NGDKPHGVK 9
+GDKP G++
Sbjct: 487 SGDKPGGIQ 495


>sp|PURP_PYRHO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus horikoshii (strain ATCC

Query: 4 KPHGVK 9
KPHG K
Sbjct: 131 KPHGAK 136


>sp|PURP_PYRFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 KPHGVK 9
KPHG K
Sbjct: 132 KPHGAK 137


>sp|PURP_PYRAB|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 4 KPHGVK 9
KPHG K
Sbjct: 135 KPHGAK 140


>sp|RNH2_METTP|RIBONUCLEASE HII|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 NGDKPHGVKK 10
NGD P V+K
Sbjct: 189 NGDLPSFVRK 198


>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 3 DKPHGVK 9
D+PHG +
Sbjct: 169 DRPHGTR 175


>sp|GLCD1_PICTO|GLUCOSE 1-dehydrogenase 1|Picrophilus torridus (strain ATCC 700027

Query: 1 NGDKPH 6
NG KPH
Sbjct: 294 NGQKPH 299


>sp|GLCD2_SACS2|GLUCOSE 1-dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NGDKPH 6
NG KPH
Sbjct: 309 NGQKPH 314


>sp|END4_THEVO|PROBABLE endonuclease 4|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NGDKPHGVKK 10
NG+K G++K
Sbjct: 121 NGNKDEGIRK 130


>sp|Y086_METJA|UNCHARACTERIZED protein MJ0086|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NGDKPHGVKK 10
N KP G+KK
Sbjct: 291 NFSKPEGLKK 300


>sp|FOLD_HALSA|BIFUNCTIONAL protein FolD|Halobacterium salinarum (strain ATCC 700922

Query: 5 PHGVKK 10
PHGV+K
Sbjct: 141 PHGVQK 146


>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 2 GDKPH 6
GDKPH
Sbjct: 308 GDKPH 312


>sp|GLCD2_CALMQ|GLUCOSE 1-dehydrogenase 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 NGDKPH 6
NG KPH
Sbjct: 307 NGQKPH 312


>sp|GLCDH_SACSO|GLUCOSE 1-dehydrogenase|Saccharolobus solfataricus (Sulfolobus

Query: 1 NGDKPH 6
NG KPH
Sbjct: 307 NGQKPH 312


>sp|GLCD1_SACS2|GLUCOSE 1-dehydrogenase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NGDKPH 6
NG KPH
Sbjct: 307 NGQKPH 312


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 2 GDKPHGVKK 10
G+KP +KK
Sbjct: 1608 GEKPETIKK 1616


>sp|Y018_METJA|UNCHARACTERIZED protein MJ0018|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GDKPHGVKK 10
GDKP VKK
Sbjct: 41 GDKPLEVKK 49


>sp|FOLD_NATPD|BIFUNCTIONAL protein FolD|Natronomonas pharaonis (strain ATCC 35678

Query: 5 PHGVKK 10
PHGV+K
Sbjct: 141 PHGVQK 146




96|Sequence|476|485|HGVKKPSKKQ

>sp|CHEA_HALS3|CHEMOTAXIS protein CheA|Halobacterium salinarum (strain ATCC 29341

Query: 1 HGVKKPSKKQ 10
HG++KP+ ++
Sbjct: 413 HGIEKPAVRE 422


>sp|DGGGP_METM7|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 3 VKKPSKKQ 10
VK PSKK+
Sbjct: 245 VKNPSKKE 252


>sp|VHUB_METVO|POLYFERREDOXIN protein VhuB|Methanococcus voltae

Query: 4 KKPSKKQ 10
KKPSK+Q
Sbjct: 181 KKPSKRQ 187


>sp|COXX1_PICTO|PROTOHEME IX farnesyltransferase 1|Picrophilus torridus (strain ATCC 700027

Query: 3 VKKPSKK 9
+KKP+KK
Sbjct: 262 IKKPTKK 268


>sp|ADHS1_ARCFU|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HGVKKPSK 8
HG+ KP K
Sbjct: 27 HGITKPEK 34


>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 HGVKKP 6
HG+KKP
Sbjct: 304 HGIKKP 309


>sp|HTPX_HALSA|PROTEASE HtpX homolog|Halobacterium salinarum (strain ATCC 700922

Query: 2 GVKKPSKK 9
G+KKP+ K
Sbjct: 81 GIKKPTLK 88


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GVKKPSKK 9
GVKKP K+
Sbjct: 313 GVKKPGKR 320


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VKKPSKK 9
++KPSKK
Sbjct: 427 IQKPSKK 433


>sp|THIC_SULAC|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VKKPSKK 9
VK+PSKK
Sbjct: 45 VKRPSKK 51




97|Sequence|481|490|PSKKQQEPAA

***** No hits found ******


98|Sequence|486|495|QEPAAPPPPE

>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 6 PPPPE 10
PPPPE
Sbjct: 156 PPPPE 160


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 1 QEPAAPPPPE 10
QE A PP PE
Sbjct: 684 QEMAIPPAPE 693


>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 3 PAAPPPPE 10
P PP PE
Sbjct: 127 PGCPPSPE 134


>sp|GATE_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 2 EPAAPPPPE 10
EP P PPE
Sbjct: 453 EPLVPEPPE 461


>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EPAAPPPPE 10
EP PP PE
Sbjct: 264 EPDIPPLPE 272


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 QEPAAPPPPE 10
+E A PP PE
Sbjct: 684 EEMAIPPAPE 693


>sp|COBQ_METPE|PROBABLE cobyric acid synthase|Methanosphaerula palustris (strain ATCC

Query: 1 QEPAAPPPP 9
Q AAP PP
Sbjct: 370 QRTAAPVPP 378


>sp|FRHG_METJA|COENZYME F420 hydrogenase subunit gamma|Methanocaldococcus jannaschii

Query: 3 PAAPPPPE 10
P PP PE
Sbjct: 126 PGCPPSPE 133


>sp|DPCKG_CENSY|GTP-DEPENDENT dephospho-CoA kinase|Cenarchaeum symbiosum (strain A)

Query: 1 QEPAAPPP 8
EPA PPP
Sbjct: 57 HEPAGPPP 64


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 QEPAAPPPPE 10
QE PP PE
Sbjct: 684 QEMPIPPAPE 693




99|Sequence|491|500|PPPPEDVDLL

>sp|ILVC_UNCAG|KETOL-ACID reductoisomerase (NAD(+))|Uncultured archaeon GZfos26G2

Query: 3 PPEDVDLL 10
PPEDVD++
Sbjct: 123 PPEDVDVI 130


>sp|Y640_METJA|UNCHARACTERIZED protein MJ0640|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PPPEDVDLL 10
P PE++DL+
Sbjct: 248 PKPEEIDLI 256


>sp|ILVC_HALMA|KETOL-ACID reductoisomerase (NADP(+))|Haloarcula marismortui (strain ATCC

Query: 3 PPEDVDL 9
PPEDVD+
Sbjct: 123 PPEDVDV 129


>sp|UPPS_HALSA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Halobacterium

Query: 1 PPPPEDVD 8
P PPEDV+
Sbjct: 288 PDPPEDVE 295


>sp|ILVC_METMA|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina mazei (strain ATCC

Query: 3 PPEDVDLL 10
PP+DVD+
Sbjct: 119 PPKDVDVF 126


>sp|ILVC_METBF|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 3 PPEDVDLL 10
PP+DVD+
Sbjct: 119 PPKDVDVF 126


>sp|ILVC_METAC|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina acetivorans (strain ATCC

Query: 3 PPEDVDLL 10
PP+DVD+
Sbjct: 119 PPKDVDVF 126


>sp|HOSA_SULTO|HOMOCITRATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PPPPEDVDLL 10
P PPE+++ L
Sbjct: 378 PKPPENIEAL 387


>sp|ILVC_METHJ|KETOL-ACID reductoisomerase (NADP(+))|Methanospirillum hungatei JF-1 (strain

Query: 3 PPEDVDLL 10
PP DVD++
Sbjct: 118 PPADVDVI 125


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 1 PPPPEDVDL 9
P P EDVDL
Sbjct: 219 PEPSEDVDL 227


>sp|CBIA_THEVO|COBYRINATE a,c-diamide synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PPEDVDLL 10
PPED D L
Sbjct: 282 PPEDTDGL 289


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PPPEDVDL 9
P P+DVDL
Sbjct: 15 PLPDDVDL 22


>sp|HOSA_SACI2|HOMOCITRATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PPPPEDVDLL 10
P PPE ++ L
Sbjct: 379 PRPPEQIEAL 388


>sp|HOSA_SACI7|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PPPPEDVDLL 10
P PPE ++ L
Sbjct: 379 PRPPEQIEAL 388


>sp|HOSA_SACI6|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PPPPEDVDLL 10
P PPE ++ L
Sbjct: 379 PRPPEQIEAL 388


>sp|HOSA_SACI4|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PPPPEDVDLL 10
P PPE ++ L
Sbjct: 379 PRPPEQIEAL 388


>sp|HOSA_SACI3|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PPPPEDVDLL 10
P PPE ++ L
Sbjct: 379 PRPPEQIEAL 388


>sp|HOSA_SACI1|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PPPPEDVDLL 10
P PPE ++ L
Sbjct: 379 PRPPEQIEAL 388


>sp|HOSA_SACS2|HOMOCITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PPPPEDVDLL 10
P PPE ++ L
Sbjct: 379 PRPPEQIEAL 388


>sp|KAE1B_PICTO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 PEDVDLL 10
PED+DL+
Sbjct: 66 PEDLDLI 72


>sp|SURE_PICTO|5'-NUCLEOTIDASE SurE|Picrophilus torridus (strain ATCC 700027

Query: 4 PEDVDLL 10
P+DVD+L
Sbjct: 153 PDDVDIL 159


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 2 PPPEDVDLL 10
P PEDV LL
Sbjct: 599 PLPEDVTLL 607


>sp|Y002_METJA|UNCHARACTERIZED protein MJ0002|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PPPEDVDL 9
P P DVD+
Sbjct: 22 PNPSDVDI 29


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PPPPEDVDL 9
P P EDVD+
Sbjct: 303 PQPHEDVDI 311


>sp|PDXT_SULAC|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Sulfolobus acidocaldarius

Query: 4 PEDVDLL 10
P+DVDL+
Sbjct: 38 PKDVDLI 44


>sp|SURE_METBU|5'-NUCLEOTIDASE SurE|Methanococcoides burtonii (strain DSM 6242

Query: 4 PEDVDLL 10
PE+VDLL
Sbjct: 169 PENVDLL 175


>sp|Y798_METJA|TPR repeat-containing protein MJ0798|Methanocaldococcus jannaschii

Query: 4 PEDVDLL 10
P+D+DL+
Sbjct: 233 PDDIDLI 239


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PPPED 6
PPPED
Sbjct: 106 PPPED 110


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PPPED 6
PPPED
Sbjct: 106 PPPED 110


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PPPED 6
PPPED
Sbjct: 106 PPPED 110


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PPPED 6
PPPED
Sbjct: 106 PPPED 110


>sp|ALAXS_PYRHO|ALANYL-TRNA editing protein AlaX-S|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PPPEDVDLL 10
P PEDV +L
Sbjct: 95 PVPEDVRIL 103


>sp|DAPAT_METS3|LL-DIAMINOPIMELATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 PPEDVDLL 10
P EDVD++
Sbjct: 174 PEEDVDII 181


>sp|ILVC_HALWD|KETOL-ACID reductoisomerase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PPEDVDL 9
PP DVD+
Sbjct: 142 PPADVDV 148


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 2 PPPEDVD 8
P PEDV+
Sbjct: 724 PTPEDVE 730


>sp|Y1065_METJA|UNCHARACTERIZED protein MJ1065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPPPEDVDL 9
P P EDV+L
Sbjct: 175 PTPYEDVNL 183


>sp|RS2_KORCO|SMALL ribosomal subunit protein uS2|Korarchaeum cryptofilum (strain

Query: 2 PPPEDVDLL 10
PP ED DLL
Sbjct: 12 PPVEDKDLL 20


>sp|SYR_NATPD|ARGININE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PPEDVDLL 10
PPEDVD +
Sbjct: 32 PPEDVDAV 39


>sp|SURE_METAC|5'-NUCLEOTIDASE SurE|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PEDVDLL 10
PE+VDLL
Sbjct: 174 PENVDLL 180


>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PPEDVDLL 10
PPEDV+ +
Sbjct: 169 PPEDVEAI 176


>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PPPPEDV 7
PP PED+
Sbjct: 268 PPLPEDM 274


>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPPPEDVD 8
P PP D+D
Sbjct: 203 PTPPRDLD 210


>sp|AROD_HALSA|3-DEHYDROQUINATE dehydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PPPPEDVDLL 10
P PE VDL+
Sbjct: 19 PAAPEHVDLV 28


>sp|AROD_HALS3|3-DEHYDROQUINATE dehydratase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PPPPEDVDLL 10
P PE VDL+
Sbjct: 19 PAAPEHVDLV 28


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 2 PPPEDVD 8
P PEDV+
Sbjct: 776 PTPEDVE 782


>sp|SYR_HALMA|ARGININE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PPEDVDLL 10
PPEDVD +
Sbjct: 32 PPEDVDAV 39


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 PPPPED 6
PP PED
Sbjct: 727 PPKPED 732




100|Sequence|496|505|DVDLLGLEGS

>sp|CPGS_METST|CYCLIC 2,3-diphosphoglycerate synthetase|Methanosphaera stadtmanae (strain

Query: 1 DVDLLGLEGS 10
DV+L+ LEGS
Sbjct: 252 DVNLVALEGS 261


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DVDLLGLEG 9
DVDL+G+ G
Sbjct: 131 DVDLVGITG 139


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVDLLGLE 8
D+DLLG+E
Sbjct: 80 DLDLLGVE 87


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DVDLLGLEG 9
DVDL+G+ G
Sbjct: 131 DVDLVGVTG 139


>sp|RIFK_METBF|RIBOFLAVIN kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DVDLLGLEG 9
D+D+L LEG
Sbjct: 86 DLDILELEG 94


>sp|RS6E_METJA|SMALL ribosomal subunit protein eS6|Methanocaldococcus jannaschii (strain

Query: 3 DLLGLEG 9
+LLGLEG
Sbjct: 119 ELLGLEG 125


>sp|SRP54_PYRCJ|SIGNAL recognition particle 54 kDa|Pyrobaculum calidifontis (strain DSM

Query: 2 VDLLGLEGS 10
V LLG+EGS
Sbjct: 101 VLLLGVEGS 109


>sp|SRP54_PYRAE|SIGNAL recognition particle 54 kDa|Pyrobaculum aerophilum (strain ATCC

Query: 2 VDLLGLEGS 10
V LLG+EGS
Sbjct: 102 VLLLGVEGS 110


>sp|HICDH_PYRHO|ISOCITRATE/HOMOISOCITRATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VDLLGLEGS 10
+D LGL+GS
Sbjct: 275 LDYLGLDGS 283


>sp|SRP54_PYRAR|SIGNAL recognition particle 54 kDa|Pyrobaculum arsenaticum (strain DSM

Query: 2 VDLLGLEGS 10
V LLG+EGS
Sbjct: 102 VLLLGVEGS 110


>sp|SRP54_PYRIL|SIGNAL recognition particle 54 kDa|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VDLLGLEGS 10
V LLG+EGS
Sbjct: 102 VLLLGVEGS 110




101|Sequence|501|510|GLEGSAMSNS

>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 LEGSAMSNS 10
L+G AMS+S
Sbjct: 297 LDGKAMSSS 305


>sp|Y1598_METJA|UPF0284 protein MJ1598|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EGSAMSNS 10
EG AM+NS
Sbjct: 120 EGKAMNNS 127




102|Sequence|506|515|AMSNSFSPPA

>sp|AROE_METST|SHIKIMATE dehydrogenase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 2 MSNSFSPP 9
+ +SFSPP
Sbjct: 16 IEHSFSPP 23


>sp|AROE_METS3|SHIKIMATE dehydrogenase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 2 MSNSFSPP 9
+ +SFSPP
Sbjct: 16 VEHSFSPP 23




103|Sequence|511|520|FSPPAAPPTN

>sp|DNAG_THEAC|DNA primase DnaG|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PPAAPPTN 10
PP PP N
Sbjct: 324 PPEQPPKN 331


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SPPAAPPT 9
+PPA PP+
Sbjct: 371 NPPAKPPS 378


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SPPAAP 7
SPPA+P
Sbjct: 265 SPPASP 270


>sp|Y1096_ARCFU|UNCHARACTERIZED protein AF_1096|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PAAPPT 9
PAAPP+
Sbjct: 43 PAAPPS 48


>sp|Y812_ARCFU|UNCHARACTERIZED protein AF_0812|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FSPPAAPP 8
+ PP PP
Sbjct: 198 YQPPVKPP 205




104|Sequence|516|525|APPTNSELLS

>sp|GLMS_METMP|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanococcus maripaludis (strain

Query: 2 PPTNSELLS 10
PP+ SELL+
Sbjct: 515 PPSKSELLN 523


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 APPTNSEL 8
APP SEL
Sbjct: 277 APPNTSEL 284


>sp|RL11_HYPBU|LARGE ribosomal subunit protein uL11|Hyperthermus butylicus (strain DSM

Query: 2 PPTNSELL 9
PPT +ELL
Sbjct: 70 PPTTTELL 77


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 2 PPTNSELL 9
PP N ELL
Sbjct: 277 PPKNVELL 284


>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein MJ0993|Methanocaldococcus

Query: 1 APPTNSELLS 10
AP T +EL+S
Sbjct: 142 APTTGAELIS 151




105|Sequence|521|530|SELLSDLFGG

>sp|IF6_THEKO|TRANSLATION initiation factor 6|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ELLSDLFG 9
E LSDLFG
Sbjct: 174 EWLSDLFG 181


>sp|SDO1_METJA|RIBOSOME maturation protein SDO1 homolog|Methanocaldococcus jannaschii

Query: 2 ELLSDLFG 9
ELLS +FG
Sbjct: 66 ELLSKIFG 73


>sp|FBPAP_IGNH4|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 ELLSDLFGG 10
+LLSD F G
Sbjct: 97 DLLSDAFSG 105


>sp|GGPS_SULAC|GERANYLGERANYL diphosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 SDLFGG 10
SDLFGG
Sbjct: 54 SDLFGG 59


>sp|CDC62_AERPE|ORC1-TYPE DNA replication protein 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 ELLSDLFG 9
EL+SD++G
Sbjct: 241 ELISDVYG 248


>sp|FBPAP_METTM|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanothermobacter marburgensis (strain ATCC

Query: 2 ELLSDLFGG 10
+LLSD F G
Sbjct: 95 DLLSDTFSG 103


>sp|SAHH_PYRHO|ADENOSYLHOMOCYSTEINASE horikoshii (strain ATCC 700860

Query: 2 ELLSDLFGG 10
ELL +++GG
Sbjct: 142 ELLDEIWGG 150


>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ELLSDLFGG 10
+LLSD F G
Sbjct: 95 DLLSDSFSG 103


>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 2 ELLSDLFGG 10
+LLSD F G
Sbjct: 95 DLLSDSFSG 103




106|Sequence|526|535|DLFGGGGAAG

>sp|TRM1_METS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanobrevibacter smithii

Query: 1 DLFGGGGAAG 10
DLFGG G G
Sbjct: 62 DLFGGSGIRG 71


>sp|Y1614_METAC|MACRO domain-containing protein MA_1614|Methanosarcina acetivorans

Query: 2 LFGGGGAAG 10
L GGGG G
Sbjct: 52 LLGGGGVDG 60


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LFGGGGAAG 10
LFG GG+A
Sbjct: 171 LFGPGGSAA 179


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 DLFGGGG 7
D +GGGG
Sbjct: 152 DYYGGGG 158


>sp|Y1633_METJA|UNCHARACTERIZED protein MJ1633|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FGGGG 7
FGGGG
Sbjct: 428 FGGGG 432


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 5 GGGAAG 10
GGGAAG
Sbjct: 10 GGGAAG 15


>sp|Y177_METMA|MACRO domain-containing protein MM_0177|Methanosarcina mazei (strain

Query: 2 LFGGGGAAG 10
L GGGG G
Sbjct: 44 LLGGGGVDG 52


>sp|AROE_CALMQ|SHIKIMATE dehydrogenase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 2 LFGGGGAA 9
L G GGAA
Sbjct: 120 LIGAGGAA 127


>sp|AROE_NITMS|SHIKIMATE dehydrogenase (NADP(+))|Nitrosopumilus maritimus (strain SCM1)

Query: 2 LFGGGGAA 9
L G GGAA
Sbjct: 124 LLGAGGAA 131


>sp|MTTB_METBU|TRIMETHYLAMINE methyltransferase MttB|Methanococcoides burtonii (strain DSM 6242

Query: 1 DLFGGGGAAG 10
D+FG AAG
Sbjct: 441 DMFGDWAAAG 450




107|Sequence|531|540|GGAAGPTQAG

>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 GAAGPTQA 9
G AGPTQ+
Sbjct: 178 GFAGPTQS 185


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 GAAGPTQA 9
G AGPTQ+
Sbjct: 178 GFAGPTQS 185


>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 2 GAAGPTQA 9
G AGPTQ+
Sbjct: 180 GFAGPTQS 187


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 2 GAAGPTQA 9
G AGPTQ+
Sbjct: 180 GFAGPTQS 187




108|Sequence|536|545|PTQAGQSGVE

>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PTQAGQSGVE 10
P +AG+ G+E
Sbjct: 41 PVKAGEKGIE 50


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 PTQAGQSGV 9
PT GQ+G+
Sbjct: 85 PTMGGQTGL 93


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 PTQAGQSGV 9
PT GQ+G+
Sbjct: 88 PTMGGQTGL 96


>sp|RL24_CENSY|LARGE ribosomal subunit protein uL24|Cenarchaeum symbiosum (strain A)

Query: 1 PTQAGQSGVE 10
P QAG +G E
Sbjct: 146 PEQAGAAGAE 155


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 1 PTQAGQSGV 9
PT GQ+G+
Sbjct: 88 PTMGGQTGL 96


>sp|RL1_METHJ|LARGE ribosomal subunit protein uL1|Methanospirillum hungatei JF-1

Query: 2 TQAGQSGVE 10
TQA +SGVE
Sbjct: 71 TQARESGVE 79




109|Sequence|541|550|QSGVEDVFHP

>sp|NADM_AERPE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 QSGVEDVFHP 10
+SG ED HP
Sbjct: 141 ESGWEDCLHP 150


>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 QSGVEDVFH 9
+SG+EDVF+
Sbjct: 338 ESGLEDVFY 346


>sp|GATC_METS5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Metallosphaera sedula (strain ATCC

Query: 3 GVEDVFHP 10
GVE +FHP
Sbjct: 50 GVEPMFHP 57


>sp|RIBL_PICTO|FAD synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 SGVEDVFHP 10
+GV D+ HP
Sbjct: 6 TGVFDILHP 14


>sp|SP5G_ARCFU|PUTATIVE septation protein SpoVG|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 EDVFHP 10
+DVFHP
Sbjct: 59 QDVFHP 64


>sp|RIBL_ACIB4|FAD synthase|Aciduliprofundum boonei (strain DSM 19572

Query: 2 SGVEDVFHP 10
+GV D+ HP
Sbjct: 7 TGVFDILHP 15


>sp|Y123_PYRFU|UPF0146 protein PF0123|Pyrococcus furiosus (strain ATCC 43587

Query: 4 VEDVFHP 10
V+DVF+P
Sbjct: 62 VDDVFNP 68


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC

Query: 3 GVEDVFHP 10
GVE VF P
Sbjct: 51 GVEKVFDP 58


>sp|KUP_METBF|PROBABLE potassium transport system protein|Methanosarcina barkeri (strain

Query: 3 GVEDVF 8
GVED+F
Sbjct: 559 GVEDIF 564


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 SGVEDVFHP 10
SG+ DV+ P
Sbjct: 614 SGIADVYTP 622


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 3 GVEDVFHP 10
G ED+F P
Sbjct: 165 GREDIFEP 172


>sp|RL3_METAR|LARGE ribosomal subunit protein uL3|Methanocella arvoryzae (strain DSM

Query: 3 GVEDVFHP 10
G++DVF P
Sbjct: 188 GIKDVFAP 195


>sp|SYS_HALSA|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 QSGVEDVFHP 10
+ G EDVF P
Sbjct: 190 EQGYEDVFPP 199


>sp|SYS_HALS3|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 QSGVEDVFHP 10
+ G EDVF P
Sbjct: 190 EQGYEDVFPP 199


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QSGVEDVFHP 10
+ G+E++F P
Sbjct: 20 EEGIEELFPP 29


>sp|RL2_PICTO|LARGE ribosomal subunit protein uL2|Picrophilus torridus (strain ATCC

Query: 2 SGVEDVFHP 10
SGV FHP
Sbjct: 137 SGVNKEFHP 145


>sp|MDH_METMP|MALATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QSGVEDVFH 9
++G+E+V H
Sbjct: 278 KNGIEEVIH 286


>sp|COFD_HALMA|2-PHOSPHO-L-LACTATE transferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 SGVEDVFHP 10
+G +DVF P
Sbjct: 16 AGADDVFSP 24




110|Sequence|546|555|DVFHPSGPAS

>sp|KAE1B_METMJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 DVFHPSGPA 9
D+ HP GPA
Sbjct: 170 DLPHPGGPA 178


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 4 HPSGPAS 10
HP GPA+
Sbjct: 397 HPDGPAA 403


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 4 HPSGPAS 10
HP GPA+
Sbjct: 397 HPDGPAA 403


>sp|SP5G_ARCFU|PUTATIVE septation protein SpoVG|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DVFHP 5
DVFHP
Sbjct: 60 DVFHP 64


>sp|RL32_SACS2|LARGE ribosomal subunit protein eL32|Saccharolobus solfataricus (strain

Query: 3 FHPSG 7
FHPSG
Sbjct: 78 FHPSG 82


>sp|RL32_SACI7|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 3 FHPSG 7
FHPSG
Sbjct: 78 FHPSG 82


>sp|RL32_SACI6|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 3 FHPSG 7
FHPSG
Sbjct: 78 FHPSG 82


>sp|RL32_SACI4|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 3 FHPSG 7
FHPSG
Sbjct: 78 FHPSG 82


>sp|RL32_SACI3|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 3 FHPSG 7
FHPSG
Sbjct: 78 FHPSG 82


>sp|RL32_SACI2|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 3 FHPSG 7
FHPSG
Sbjct: 78 FHPSG 82


>sp|RL32_SACI1|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 3 FHPSG 7
FHPSG
Sbjct: 78 FHPSG 82


>sp|RL10_THEGJ|LARGE ribosomal subunit protein uL10|Thermococcus gammatolerans (strain

Query: 1 DVFHPSGPAS 10
DV P+GP S
Sbjct: 120 DVVIPAGPTS 129


>sp|RL10_THEKO|LARGE ribosomal subunit protein uL10|Thermococcus kodakarensis (strain

Query: 1 DVFHPSGPAS 10
DV P+GP S
Sbjct: 120 DVVIPAGPTS 129


>sp|RL10_PYRFU|LARGE ribosomal subunit protein uL10|Pyrococcus furiosus (strain ATCC

Query: 1 DVFHPSGPAS 10
DV P+GP S
Sbjct: 121 DVVIPAGPTS 130


>sp|RL10_THEON|LARGE ribosomal subunit protein uL10|Thermococcus onnurineus (strain NA1)

Query: 1 DVFHPSGPAS 10
DV P+GP S
Sbjct: 120 DVVIPAGPTS 129


>sp|MRE11_PYRFU|DNA double-strand break repair protein|Pyrococcus furiosus (strain

Query: 1 DVFHPSGPA 9
D+FH S P+
Sbjct: 49 DLFHSSRPS 57


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 FHPSG 7
FHPSG
Sbjct: 432 FHPSG 436


>sp|LYSZ_AERPE|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Aeropyrum pernix

Query: 2 VFHPSGPAS 10
V HPSG S
Sbjct: 60 VLHPSGVRS 68


>sp|RBLL_ARCFU|RIBULOSE bisphosphate carboxylase-like protein|Archaeoglobus fulgidus

Query: 4 HPSGPAS 10
HP GPA+
Sbjct: 394 HPDGPAA 400


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 1 DVFHPSGPA 9
D+F P G A
Sbjct: 121 DIFQPKGVA 129


>sp|DP2S_METTH|DNA polymerase II small subunit|Methanothermobacter thermautotrophicus

Query: 1 DVFHPSGP 8
++FHP P
Sbjct: 206 EIFHPGVP 213


>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 2 VFHPSGPAS 10
V H SGP S
Sbjct: 112 VLHQSGPES 120




111|Sequence|551|560|SGPASTQSTP

***** No hits found ******


112|Sequence|556|565|TQSTPRRSAT

***** No hits found ******


113|Sequence|561|570|RRSATSTSAS

***** No hits found ******


114|Sequence|566|575|STSASPTLRV

***** No hits found ******


115|Sequence|571|580|PTLRVGEGAT

>sp|KAE1_METS5|TRNA N6-adenosine threonylcarbamoyltransferase|Metallosphaera sedula

Query: 1 PTLRVG 6
PTLRVG
Sbjct: 84 PTLRVG 89


>sp|BTUDA_HALSA|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 1 PTLRVGEGA 9
PTL VG+ A
Sbjct: 360 PTLAVGDAA 368


>sp|BTUDA_HALS3|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 1 PTLRVGEGA 9
PTL VG+ A
Sbjct: 360 PTLAVGDAA 368




116|Sequence|576|585|GEGATFDPFG

>sp|GRPE_METTH|PROTEIN GrpE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GEGATFDPF 9
EG FDPF
Sbjct: 122 AEGEKFDPF 130


>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GEGATFDPFG 10
GEG F+PF
Sbjct: 638 GEGRKFEPFA 647


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 1 GEGATFDPFG 10
GEG F+PF
Sbjct: 638 GEGRKFEPFA 647


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 1 GEGATFDPF 9
GEG F+PF
Sbjct: 642 GEGKRFEPF 650


>sp|GRPE_THEAC|PROTEIN GrpE|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GEGATFDPF 9
EG+ FDP+
Sbjct: 126 AEGSKFDPY 134


>sp|CPGS_THEGJ|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus gammatolerans

Query: 1 GEGATFDPF 9
G GATF P+
Sbjct: 241 GSGATFPPY 249


>sp|TSR3_SACS2|16S rRNA aminocarboxypropyltransferase|Saccharolobus solfataricus

Query: 1 GEGATFDPFG 10
G+G DPF
Sbjct: 33 GKGVVLDPFA 42


>sp|GRPE_THEVO|PROTEIN GrpE|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GEGATFDPF 9
EG FDP+
Sbjct: 127 AEGEKFDPY 135


>sp|UVRC_METMA|UVRABC system protein C|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GEGATFDPF 9
GEG F PF
Sbjct: 122 GEGEFFGPF 130


>sp|GAD_SACS2|D-GLUCONATE/D-GALACTONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 6 FDPFG 10
FDPFG
Sbjct: 159 FDPFG 163


>sp|GRPE_METS3|PROTEIN GrpE|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GEGATFDPF 9
+G FDPF
Sbjct: 134 AKGEKFDPF 142


>sp|PRIS_METST|DNA primase small subunit PriS|Methanosphaera stadtmanae (strain ATCC

Query: 5 TFDPF 9
TFDPF
Sbjct: 307 TFDPF 311


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 6 FDPFG 10
FDPFG
Sbjct: 265 FDPFG 269


>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 1 GEGATFDPF 9
G GATF P+
Sbjct: 240 GSGATFPPY 248


>sp|TRUB_THEON|PROBABLE tRNA pseudouridine synthase B|Thermococcus onnurineus (strain

Query: 1 GEGATFDP 8
G G T DP
Sbjct: 76 GHGGTLDP 83


>sp|TRUB_THEKO|PROBABLE tRNA pseudouridine synthase B|Thermococcus kodakarensis (strain

Query: 1 GEGATFDP 8
G G T DP
Sbjct: 76 GHGGTLDP 83


>sp|TRUB_THEGJ|PROBABLE tRNA pseudouridine synthase B|Thermococcus gammatolerans (strain

Query: 1 GEGATFDP 8
G G T DP
Sbjct: 76 GHGGTLDP 83


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 1 GEGATFDP 8
G G T DP
Sbjct: 77 GHGGTLDP 84


>sp|TRUB_PYRHO|PROBABLE tRNA pseudouridine synthase B|Pyrococcus horikoshii (strain ATCC

Query: 1 GEGATFDP 8
G G T DP
Sbjct: 76 GHGGTLDP 83


>sp|TRUB_PYRFU|PROBABLE tRNA pseudouridine synthase B|Pyrococcus furiosus (strain ATCC

Query: 1 GEGATFDP 8
G G T DP
Sbjct: 76 GHGGTLDP 83


>sp|TRUB_PYRAB|PROBABLE tRNA pseudouridine synthase B|Pyrococcus abyssi (strain GE5 /

Query: 1 GEGATFDP 8
G G T DP
Sbjct: 76 GHGGTLDP 83


>sp|TRUB_NANEQ|PROBABLE tRNA pseudouridine synthase B|Nanoarchaeum equitans (strain

Query: 1 GEGATFDP 8
G G T DP
Sbjct: 87 GHGGTLDP 94


>sp|TRUB_METMP|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 1 GEGATFDP 8
G G T DP
Sbjct: 60 GHGGTLDP 67


>sp|TRUB_METM7|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 1 GEGATFDP 8
G G T DP
Sbjct: 60 GHGGTLDP 67


>sp|TRUB_METM6|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 1 GEGATFDP 8
G G T DP
Sbjct: 60 GHGGTLDP 67


>sp|TRUB_METM5|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 1 GEGATFDP 8
G G T DP
Sbjct: 60 GHGGTLDP 67


>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii

Query: 1 GEGATFDP 8
G G T DP
Sbjct: 75 GHGGTLDP 82


>sp|TRUB_META3|PROBABLE tRNA pseudouridine synthase B|Methanococcus aeolicus (strain ATCC

Query: 1 GEGATFDP 8
G G T DP
Sbjct: 60 GHGGTLDP 67


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC

Query: 1 GEGATFDP 8
G G T DP
Sbjct: 86 GHGGTLDP 93


>sp|EPDC_METMP|MINOR structural pilin EpdC|Methanococcus maripaludis (strain DSM 14266

Query: 4 ATFDPFG 10
ATF+P G
Sbjct: 76 ATFEPIG 82


>sp|ARSM_METAC|ARSENITE methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GEGATFDPF 9
G GA FD F
Sbjct: 81 GSGAGFDSF 89


>sp|Y2170_ARCFU|KELCH domain-containing protein AF_2170|Archaeoglobus fulgidus (strain

Query: 1 GEG-ATFDPFG 10
GEG A+FDP G
Sbjct: 197 GEGVASFDPMG 207


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 3 GATFDPFG 10
G T +PFG
Sbjct: 228 GVTVEPFG 235


>sp|IF2G_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 1 GEGATFDPF 9
G G T DP+
Sbjct: 293 GVGTTLDPY 301


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 GATFDPFG 10
G T +PFG
Sbjct: 228 GVTVEPFG 235


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GATFDPFG 10
G T +PFG
Sbjct: 224 GVTVEPFG 231


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GATFDPFG 10
G T +PFG
Sbjct: 228 GVTVEPFG 235


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GEGATFDP 8
GEG DP
Sbjct: 314 GEGVAIDP 321


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 1 GEGATFDP 8
G G T DP
Sbjct: 66 GHGGTLDP 73


>sp|TBP_HALMA|TATA-BOX-BINDING protein|Haloarcula marismortui (strain ATCC 43049

Query: 2 EGATFDP 8
EGA +DP
Sbjct: 33 EGADYDP 39


>sp|TBPE_HALSA|TATA-BOX-BINDING protein E|Halobacterium salinarum (strain ATCC 700922

Query: 2 EGATFDP 8
EGA +DP
Sbjct: 33 EGADYDP 39


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 GATFDPFG 10
G T +PFG
Sbjct: 245 GVTCEPFG 252


>sp|TRUB_METKA|PROBABLE tRNA pseudouridine synthase B|Methanopyrus kandleri (strain AV19

Query: 1 GEGATFDP 8
G G T DP
Sbjct: 74 GHGGTLDP 81


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GEGATFDPFG 10
GE FD +G
Sbjct: 142 GEAIVFDKYG 151


>sp|TBP_NATPD|TATA-BOX-BINDING protein|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EGATFDP 8
EGA +DP
Sbjct: 33 EGADYDP 39


>sp|BACH_HALHM|HALORHODOPSIN halobium (strain mex)

Query: 2 EGATFDPFG 10
EG F P+G
Sbjct: 69 EGGVFTPWG 77


>sp|TBP1_HALVD|TATA-BOX-BINDING protein 1|Haloferax volcanii (strain ATCC 29605

Query: 2 EGATFDP 8
EGA +DP
Sbjct: 33 EGADYDP 39




117|Sequence|581|590|FDPFGAPSKP

>sp|COAD_PYRHO|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DPFGAPSKP 10
DPFG P KP
Sbjct: 148 DPFGNPMKP 156


>sp|TRM1_META3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus aeolicus

Query: 2 DPFGAPS 8
DPFGAPS
Sbjct: 134 DPFGAPS 140


>sp|TRM1_METS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanobrevibacter smithii

Query: 2 DPFGAPS 8
DPFG PS
Sbjct: 133 DPFGTPS 139


>sp|TRM1_SULAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfolobus acidocaldarius

Query: 2 DPFGAPS 8
DPFG+P+
Sbjct: 131 DPFGSPA 137


>sp|TRM1_METJA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocaldococcus

Query: 2 DPFGAPS 8
DPFG+P+
Sbjct: 131 DPFGSPA 137


>sp|TRM1_ARCFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Archaeoglobus fulgidus

Query: 2 DPFGAPS 8
DPFG+P+
Sbjct: 108 DPFGSPA 114


>sp|TRM1_METM5|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 FDPFGAP 7
DPFG+P
Sbjct: 130 LDPFGSP 136


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 2 DPFGAPS 8
DPFG+P+
Sbjct: 129 DPFGSPA 135


>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 1 FDPFGAPS 8
DPFG+P+
Sbjct: 137 LDPFGSPT 144


>sp|TRM1_METMP|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 FDPFGAP 7
DPFG+P
Sbjct: 130 LDPFGSP 136


>sp|TRM1_METMI|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 FDPFGAP 7
DPFG+P
Sbjct: 130 LDPFGSP 136


>sp|TRM1_METM7|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 FDPFGAP 7
DPFG+P
Sbjct: 130 LDPFGSP 136


>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 1 FDPFGAP 7
DPFG+P
Sbjct: 138 LDPFGSP 144


>sp|TRM1_PYRIL|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum islandicum

Query: 2 DPFGAPS 8
DPFG+P+
Sbjct: 127 DPFGSPA 133


>sp|TRM1_METM6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 FDPFGAP 7
DPFG+P
Sbjct: 130 LDPFGSP 136


>sp|TRM1_THEON|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus onnurineus

Query: 1 FDPFGAP 7
DPFG+P
Sbjct: 137 LDPFGSP 143


>sp|COAD_PYRAB|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 DPFGAPSK 9
DPFG P K
Sbjct: 148 DPFGNPIK 155


>sp|TRM1_PYRHO|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus horikoshii

Query: 1 FDPFGAP 7
DPFG+P
Sbjct: 140 LDPFGSP 146


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 1 FDPFGAPSKP 10
F+P AP++P
Sbjct: 191 FNPLSAPTQP 200


>sp|TRM1_PYRCJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum calidifontis

Query: 2 DPFGAPS 8
DPFG+P+
Sbjct: 131 DPFGSPA 137


>sp|TRM1_PYRAB|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus abyssi (strain

Query: 1 FDPFGAP 7
DPFG+P
Sbjct: 137 LDPFGSP 143


>sp|TRM1_HALSA|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 2 DPFGAP 7
DPFG+P
Sbjct: 125 DPFGSP 130


>sp|TRM1_HALS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 2 DPFGAP 7
DPFG+P
Sbjct: 125 DPFGSP 130


>sp|COAD_THEGJ|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DPFGAPSK 9
DPFG P K
Sbjct: 149 DPFGNPLK 156


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 2 DPFGAPS 8
DPFG P+
Sbjct: 130 DPFGTPA 136


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei (strain

Query: 2 DPFGAPS 8
DPFG PS
Sbjct: 138 DPFGTPS 144


>sp|TRM1_PYRNV|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum neutrophilum

Query: 2 DPFGAPS 8
DPFG+P+
Sbjct: 127 DPFGSPA 133


>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 1 FDPFGAPS 8
DPFG+P+
Sbjct: 128 LDPFGSPA 135


>sp|TRM1_PYRFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus furiosus (strain

Query: 1 FDPFGAP 7
DPFG+P
Sbjct: 139 LDPFGSP 145


>sp|TRM1_NATPD|TRNA (guanine(26)-N(2))-dimethyltransferase|Natronomonas pharaonis

Query: 1 FDPFGAP 7
DPFG P
Sbjct: 120 LDPFGTP 126


>sp|TRM1_PYRAE|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum aerophilum

Query: 2 DPFGAPS 8
DPFG+P+
Sbjct: 129 DPFGSPA 135


>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 2 DPFGAPS 8
DPFG+P+
Sbjct: 130 DPFGSPA 136


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 1 FDPFGAP 7
DPFG+P
Sbjct: 137 LDPFGSP 143


>sp|TRM1_SACI6|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 2 DPFGAP 7
DPFG+P
Sbjct: 130 DPFGSP 135


>sp|TRM1_SACI4|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 2 DPFGAP 7
DPFG+P
Sbjct: 130 DPFGSP 135


>sp|TRM1_SACI2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 2 DPFGAP 7
DPFG+P
Sbjct: 130 DPFGSP 135


>sp|TRM1_SACI7|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 2 DPFGAP 7
DPFG+P
Sbjct: 130 DPFGSP 135


>sp|TRM1_SACI1|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 2 DPFGAP 7
DPFG+P
Sbjct: 130 DPFGSP 135


>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 2 DPFGAPS 8
DPFG P+
Sbjct: 127 DPFGTPA 133


>sp|TRM1_METMJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoculleus marisnigri

Query: 1 FDPFGAPS 8
DPFG P+
Sbjct: 123 LDPFGTPA 130


>sp|TRM1_SACI3|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 2 DPFGAP 7
DPFG+P
Sbjct: 130 DPFGSP 135


>sp|TRM1_HALMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloarcula marismortui

Query: 2 DPFGAP 7
DPFG P
Sbjct: 121 DPFGTP 126


>sp|GAD_SACS2|D-GLUCONATE/D-GALACTONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FDPFG 5
FDPFG
Sbjct: 159 FDPFG 163


>sp|TRUA_METTP|TRNA pseudouridine synthase A|Methanothrix thermoacetophila (strain DSM

Query: 3 PFGAPSKP 10
P GAP+ P
Sbjct: 205 PHGAPTAP 212


>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 1 FDPFGAP 7
DPFG P
Sbjct: 133 LDPFGTP 139


>sp|COAD_THEKO|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DPFGAP 7
DPFG P
Sbjct: 149 DPFGRP 154


>sp|COAD_PYRFU|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DPFGAP 7
DPFG P
Sbjct: 149 DPFGNP 154


>sp|TRM1_PYRAR|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum arsenaticum

Query: 2 DPFGAPS 8
DPFG+P+
Sbjct: 129 DPFGSPA 135


>sp|RADA_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 4 FGAPSKP 10
FG P+KP
Sbjct: 270 FGDPTKP 276


>sp|RADA_METBU|DNA repair and recombination protein|Methanococcoides burtonii (strain

Query: 4 FGAPSKP 10
FG P+KP
Sbjct: 268 FGDPTKP 274


>sp|TRM1_THEVO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma volcanium

Query: 2 DPFGAP 7
DP+G+P
Sbjct: 118 DPYGSP 123


>sp|RADA_METMJ|DNA repair and recombination protein|Methanoculleus marisnigri (strain

Query: 4 FGAPSKP 10
FG P+KP
Sbjct: 267 FGDPTKP 273


>sp|RADA_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 4 FGAPSKP 10
FG P+KP
Sbjct: 286 FGDPTKP 292


>sp|RADA_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 4 FGAPSKP 10
FG P+KP
Sbjct: 286 FGDPTKP 292


>sp|Y038_METJA|UNCHARACTERIZED protein MJ0038|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PFGAPSKP 10
P+G P KP
Sbjct: 36 PYGYPDKP 43


>sp|TRM1_THEAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma acidophilum

Query: 2 DPFGAP 7
DP+G+P
Sbjct: 118 DPYGSP 123


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 1 FDPFGAP 7
DPFG P
Sbjct: 123 LDPFGTP 129


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 2 DPFGAPS 8
DPFG P+
Sbjct: 138 DPFGTPA 144


>sp|PCP_THELN|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus litoralis (strain ATCC 51850

Query: 1 FDPFGAPSK 9
F+PFG SK
Sbjct: 9 FEPFGGDSK 17


>sp|Y527_METJA|UNCHARACTERIZED protein MJ0527|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FGAPSKP 10
FG P KP
Sbjct: 27 FGLPEKP 33


>sp|TRM1_METKA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanopyrus kandleri

Query: 2 DPFGAP 7
DPFG P
Sbjct: 128 DPFGPP 133


>sp|TRM1_METAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina acetivorans

Query: 2 DPFGAPS 8
DPFG P+
Sbjct: 138 DPFGTPA 144


>sp|RADA_METLZ|DNA repair and recombination protein|Methanocorpusculum labreanum

Query: 4 FGAPSKP 10
FG P+KP
Sbjct: 272 FGDPTKP 278


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 1 FDPFGAPS 8
DPFG+P+
Sbjct: 123 LDPFGSPA 130


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 1 FDPFGAPS 8
DPFG P+
Sbjct: 123 LDPFGTPA 130


>sp|TRM1_AERPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Aeropyrum pernix (strain

Query: 2 DPFGAPS 8
DP+G+P+
Sbjct: 150 DPYGSPA 156


>sp|MTAP_CENSY|S-METHYL-5'-THIOADENOSINE phosphorylase|Cenarchaeum symbiosum (strain A)

Query: 3 PFGAPS 8
P+GAPS
Sbjct: 13 PYGAPS 18


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 1 FDPFG 5
FDPFG
Sbjct: 265 FDPFG 269


>sp|GVPD2_HALSA|PROTEIN GvpD2|Halobacterium salinarum (strain ATCC 700922

Query: 2 DPFGAP 7
DPFG P
Sbjct: 96 DPFGLP 101


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei (strain

Query: 2 DPFGAPS 8
DPFG P+
Sbjct: 124 DPFGTPA 130


>sp|EF1A_METB6|ELONGATION factor 1-alpha|Methanoregula boonei (strain DSM 21154

Query: 1 FDPFGAPSKP 10
D F PSKP
Sbjct: 211 LDTFKEPSKP 220




118|Sequence|586|595|APSKPSGQDL

>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 1 APSKPSGQDL 10
AP+KPSG++L
Sbjct: 368 APNKPSGREL 377


>sp|CDC61_AERPE|ORC1-TYPE DNA replication protein 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 PSKPSGQDL 10
P +P GQDL
Sbjct: 151 PKRPGGQDL 159


>sp|JAMM1_PYRFU|DESAMPYLASE furiosus (strain ATCC 43587

Query: 2 PSKPSGQDL 10
P PSG+DL
Sbjct: 94 PPIPSGKDL 102


>sp|ARLY_METTP|ARGININOSUCCINATE lyase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PSKPSGQDL 10
P KPS +DL
Sbjct: 390 PGKPSLEDL 398


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 1 APSKPSGQD 9
AP+KPS ++
Sbjct: 368 APNKPSEEE 376


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 APSKPSGQD 9
AP+KPS ++
Sbjct: 368 APNKPSEEE 376


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 APSKPSGQDL 10
AP K +G+D+
Sbjct: 8 APDKDTGEDI 17




119|Sequence|591|600|SGQDLLGSFL

>sp|Y1170_THEAC|PUTATIVE sulfur carrier protein Ta1170/Ta1414|Thermoplasma acidophilum

Query: 1 SGQDLLGSF 9
SGQ+L+G F
Sbjct: 56 SGQELVGVF 64


>sp|TRPG_HALSA|ANTHRANILATE synthase component 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 GQDLLGSFL 10
G D++G+FL
Sbjct: 184 GHDVIGNFL 192


>sp|HEM1_METHJ|GLUTAMYL-TRNA reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 DLLGSFL 10
DLLG+FL
Sbjct: 64 DLLGTFL 70


>sp|CDPAS_STAMF|CDP-ARCHAEOL synthase|Staphylothermus marinus (strain ATCC 43588

Query: 4 DLLGSFL 10
DLLGSF+
Sbjct: 99 DLLGSFI 105




120|Sequence|596|605|LGSFLNTSSA

>sp|AROD_IGNH4|3-DEHYDROQUINATE dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LGSFLNTSS 9
LGSFLN S
Sbjct: 180 LGSFLNYGS 188


>sp|AIPS_AERPE|ARCHAETIDYLINOSITOL phosphate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LGSFLNTS 8
LGSFL++S
Sbjct: 83 LGSFLDSS 90




121|Sequence|601|610|NTSSASSDPF

>sp|TRMY_HALLT|TRNA (pseudouridine(54)-N(1))-methyltransferase|Halorubrum lacusprofundi

Query: 2 TSSASSDP 9
TSSAS+DP
Sbjct: 125 TSSASADP 132




122|Sequence|606|615|SSDPFLQPTR

>sp|Y123_ARCFU|UNCHARACTERIZED protein AF_0123|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DPFLQPTR 10
DPF++P R
Sbjct: 39 DPFVEPDR 46


>sp|RPO3_METMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina mazei (strain ATCC

Query: 1 SSDPFLQP 8
SSDP +QP
Sbjct: 114 SSDPKIQP 121


>sp|RPO3_METAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina acetivorans (strain ATCC

Query: 1 SSDPFLQP 8
SSDP +QP
Sbjct: 114 SSDPKIQP 121


>sp|NIFK_METMP|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 1 SSDPFLQPTR 10
+SDPF P R
Sbjct: 208 TSDPFDSPLR 217


>sp|NIFK_METMI|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 1 SSDPFLQPTR 10
+SDPF P R
Sbjct: 208 TSDPFDSPLR 217


>sp|NIFK_METTH|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 1 SSDPFLQPTR 10
+SDPF P R
Sbjct: 206 TSDPFDSPLR 215


>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 1 SSDPFLQPTR 10
+SDPF P R
Sbjct: 206 TSDPFDSPLR 215


>sp|GLNK1_METMA|NITROGEN regulatory protein GlnK1|Methanosarcina mazei (strain ATCC

Query: 2 SDPFLQPT 9
+D FL+PT
Sbjct: 69 NDEFLEPT 76




123|Sequence|611|620|LQPTRSPSPT

***** No hits found ******


124|Sequence|616|625|SPSPTVHASS

>sp|DPHB_METLZ|DIPHTHINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 SPSPTVHASS 10
SP PTVHA +
Sbjct: 206 SPEPTVHAGN 215


>sp|TRM1_PYRNV|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum neutrophilum

Query: 1 SPSPTVHAS 9
SP+P +HA+
Sbjct: 131 SPAPYIHAA 139


>sp|TRM1_PYRIL|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum islandicum

Query: 1 SPSPTVHAS 9
SP+P +HA+
Sbjct: 131 SPAPFLHAA 139




125|Sequence|621|630|VHASSTPAVN

>sp|Y179_ARCFU|UNCHARACTERIZED protein AF_0179|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VHASSTP 7
VH+SSTP
Sbjct: 141 VHSSSTP 147


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VHASSTPAVN 10
VH + PAVN
Sbjct: 702 VHTQTWPAVN 711


>sp|RS17_METMJ|SMALL ribosomal subunit protein uS17|Methanoculleus marisnigri (strain

Query: 2 HASSTPAVN 10
HA STP +N
Sbjct: 71 HAHSTPCIN 79


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VHASSTPAVN 10
VH + PAVN
Sbjct: 702 VHTRAWPAVN 711


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VHASSTPAV 9
+HA TP V
Sbjct: 230 IHADGTPEV 238


>sp|MTTB_METTE|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina thermophila

Query: 1 VHASSTPAVN 10
VH + TP VN
Sbjct: 166 VHETFTPIVN 175


>sp|RL3_METMJ|LARGE ribosomal subunit protein uL3|Methanoculleus marisnigri (strain

Query: 2 HASSTPAVN 10
H TPA+N
Sbjct: 320 HTVRTPAIN 328




126|Sequence|626|635|TPAVNIQPDV

>sp|IPK_METJA|ISOPENTENYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PAVNIQP 8
PAV+IQP
Sbjct: 107 PAVSIQP 113


>sp|RIBL_METEZ|FAD synthase|Methanohalobium evestigatum (strain ATCC BAA-1072

Query: 2 PAVNIQPDV 10
P NI+PDV
Sbjct: 89 PIKNIKPDV 97


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 TPAVNIQP 8
TP V IQP
Sbjct: 232 TPGVPIQP 239


>sp|FWDC_METTH|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 3 AVNIQPDV 10
A NI+PDV
Sbjct: 18 APNIKPDV 25


>sp|THII_HALSA|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC

Query: 1 TPAVNIQPDV 10
+PAV++ PD+
Sbjct: 79 SPAVSVAPDL 88


>sp|THII_HALS3|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 TPAVNIQPDV 10
+PAV++ PD+
Sbjct: 79 SPAVSVAPDL 88


>sp|FWDC_METTM|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 3 AVNIQPDV 10
A NI+PDV
Sbjct: 18 APNIKPDV 25


>sp|FWDC_METWO|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 3 AVNIQPDV 10
A NI+PDV
Sbjct: 18 APNIKPDV 25


>sp|GSA_PICTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Picrophilus torridus (strain ATCC 700027

Query: 4 VNIQPDV 10
+NI+PD+
Sbjct: 250 INIKPDI 256


>sp|DP2S_HALSA|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 3 AVNIQPDV 10
+VNI PDV
Sbjct: 482 SVNISPDV 489


>sp|DP2S_HALS3|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 3 AVNIQPDV 10
+VNI PDV
Sbjct: 482 SVNISPDV 489


>sp|CIMA_METPE|PUTATIVE (R)-citramalate synthase CimA|Methanosphaerula palustris (strain

Query: 1 TPAVNIQPD 9
TP V++ PD
Sbjct: 22 TPGVSLTPD 30




127|Sequence|631|640|IQPDVSGGWD

>sp|RLME_METVS|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus vannielii (strain

Query: 3 PDVSGGWD 10
P++SG WD
Sbjct: 123 PNISGVWD 130


>sp|RLME_METM7|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 3 PDVSGGWD 10
P++SG WD
Sbjct: 123 PNISGVWD 130


>sp|RLME_METM6|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 3 PDVSGGWD 10
P++SG WD
Sbjct: 123 PNISGVWD 130


>sp|RLME_METM5|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 3 PDVSGGWD 10
P++SG WD
Sbjct: 123 PNISGVWD 130


>sp|RLME_METJA|RIBOSOMAL RNA large subunit methyltransferase|Methanocaldococcus jannaschii

Query: 3 PDVSGGWD 10
P++SG WD
Sbjct: 126 PNISGYWD 133


>sp|RLME_METMP|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 3 PDVSGGWD 10
P++SG WD
Sbjct: 123 PNISGVWD 130


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 1 IQPDVSGGWD 10
I+P +S GW+
Sbjct: 212 IRPPLSDGWE 221


>sp|RLME_CENSY|RIBOSOMAL RNA large subunit methyltransferase|Cenarchaeum symbiosum (strain

Query: 1 IQPDVSGGW 9
+ P VSG W
Sbjct: 112 LSPQVSGNW 120


>sp|ACDE_METBU|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanococcoides

Query: 1 IQPDVSG 7
+QPDV+G
Sbjct: 22 VQPDVAG 28


>sp|KAD_METTP|ADENYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 QPDVSGGW 9
+PDV+GG+
Sbjct: 74 KPDVAGGY 81


>sp|RLME_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 1 IQPDVSGGW 9
+ P VSG W
Sbjct: 113 LSPKVSGNW 121


>sp|IF2A_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 3 PDVSGGW 9
PD++G W
Sbjct: 150 PDINGDW 156


>sp|RLME_METTP|RIBOSOMAL RNA large subunit methyltransferase|Methanothrix thermoacetophila

Query: 3 PDVSGGWD 10
P++SG WD
Sbjct: 111 PNLSGIWD 118


>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 1 IQPDVSGGWD 10
I P+ SGG D
Sbjct: 230 ISPEFSGGKD 239


>sp|RLME_META3|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus aeolicus (strain

Query: 3 PDVSGGWD 10
P++SG W+
Sbjct: 123 PNISGVWE 130


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 1 IQPDVSGGW 9
++P V+G W
Sbjct: 337 VEPRVAGTW 345


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 QPDVSGG 8
PD+SGG
Sbjct: 323 HPDISGG 329


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 QPDVSGG 8
PD+SGG
Sbjct: 323 HPDISGG 329


>sp|XDH2_HALVD|D-XYLOSE 1-dehydrogenase (NADP(+)) 2|Haloferax volcanii (strain ATCC 29605

Query: 1 IQPDVSGG 8
I PD++GG
Sbjct: 162 IDPDLAGG 169


>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 2 QPDVSGGWD 10
+P++SGG++
Sbjct: 308 EPEISGGFE 316


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PDVSGGWD 10
P VSG WD
Sbjct: 103 PYVSGRWD 110


>sp|PUR5_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IQPDVSGGWD 10
I PDV G+D
Sbjct: 136 IMPDVIRGFD 145


>sp|RLME_METBF|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina barkeri (strain

Query: 3 PDVSGGW 9
P++SG W
Sbjct: 112 PNLSGNW 118


>sp|RLME_METBU|RIBOSOMAL RNA large subunit methyltransferase|Methanococcoides burtonii

Query: 3 PDVSGGW 9
P++SG W
Sbjct: 112 PNLSGNW 118


>sp|RLME_METAC|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina acetivorans

Query: 3 PDVSGGW 9
P++SG W
Sbjct: 112 PNLSGNW 118


>sp|RLME_METMA|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina mazei (strain

Query: 3 PDVSGGW 9
P++SG W
Sbjct: 112 PNLSGNW 118


>sp|EF1B_METKA|ELONGATION factor 1-beta|Methanopyrus kandleri (strain AV19 /

Query: 1 IQPDVSGGWD 10
+ PD GG D
Sbjct: 61 VVPDAEGGTD 70


>sp|RS6E_STAMF|SMALL ribosomal subunit protein eS6|Staphylothermus marinus (strain ATCC

Query: 1 IQPDVSGG 8
++PDV GG
Sbjct: 164 MRPDVMGG 171


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 IQPDVSGG 8
+QP V+GG
Sbjct: 5169 VQPAVTGG 5176




128|Sequence|636|645|SGGWDWHAKP

>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 SGGWDWHAKP 10
+GGWD H P
Sbjct: 87 TGGWDCHGLP 96


>sp|FEOB_METJA|FE(2+) transporter FeoB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GWDWHA 8
GWDW A
Sbjct: 566 GWDWRA 571


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GGWDWHAKP 10
GGWD H P
Sbjct: 87 GGWDCHGLP 95


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GGWDWHAKP 10
GGWD H P
Sbjct: 87 GGWDCHGLP 95


>sp|THYX_SULTO|FLAVIN-DEPENDENT thymidylate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GWDWHAK 9
GWD+H K
Sbjct: 28 GWDYHEK 34


>sp|THYX_SACS2|FLAVIN-DEPENDENT thymidylate synthase|Saccharolobus solfataricus (strain ATCC

Query: 3 GWDWHAK 9
GWD+H K
Sbjct: 29 GWDYHEK 35


>sp|THYX_SULAC|FLAVIN-DEPENDENT thymidylate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GWDWHAK 9
GWD+H K
Sbjct: 28 GWDYHEK 34


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 3 GWDWHAK 9
GWDW K
Sbjct: 265 GWDWLEK 271


>sp|CSA1_SACS2|CRISPR-ASSOCIATED exonuclease Csa1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GWDWHAKP 10
GW+W P
Sbjct: 28 GWNWSEPP 35


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 GWDW 6
GWDW
Sbjct: 274 GWDW 277


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 3 GWDW 6
GWDW
Sbjct: 267 GWDW 270


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 3 GWDW 6
GWDW
Sbjct: 268 GWDW 271


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 3 GWDW 6
GWDW
Sbjct: 272 GWDW 275


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 3 GWDW 6
GWDW
Sbjct: 272 GWDW 275


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 3 GWDW 6
GWDW
Sbjct: 272 GWDW 275


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 3 GWDW 6
GWDW
Sbjct: 272 GWDW 275


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 3 GWDW 6
GWDW
Sbjct: 275 GWDW 278


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 3 GWDW 6
GWDW
Sbjct: 269 GWDW 272


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 GWDW 6
GWDW
Sbjct: 272 GWDW 275


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 GWDW 6
GWDW
Sbjct: 272 GWDW 275


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SGGWDWHA 8
+ GWDW A
Sbjct: 504 NAGWDWDA 511


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WDWHAK 9
W+WH K
Sbjct: 314 WEWHEK 319


>sp|CMR3_PYRFU|CRISPR system Cmr subunit Cmr3|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GWDWHAK 9
GWD H K
Sbjct: 268 GWDMHEK 274


>sp|SYS_THEGJ|SERINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 WDWHAK 9
W+WH K
Sbjct: 317 WEWHEK 322


>sp|SYS_THEON|SERINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 4 WDWHAK 9
W+WH K
Sbjct: 317 WEWHEK 322


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 WDWHAK 9
W+WH K
Sbjct: 317 WEWHEK 322


>sp|SYS_THESM|SERINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 4 WDWHAK 9
W+WH K
Sbjct: 317 WEWHEK 322


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GGWDWHAKP 10
GWD H P
Sbjct: 81 AGWDMHGLP 89


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GGWDWHAKP 10
GWD H P
Sbjct: 82 AGWDMHGLP 90


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGWDWHAKP 10
GWD H P
Sbjct: 81 AGWDMHGLP 89


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 3 GWDWHAK 9
GW+W A+
Sbjct: 283 GWEWLAE 289


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GWDW 6
GWDW
Sbjct: 393 GWDW 396


Query: 3 GWDWHAKP 10
GWD H P
Sbjct: 79 GWDCHGLP 86


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GWDWHAKP 10
GWD H P
Sbjct: 79 GWDCHGLP 86


>sp|SYS_THEKO|SERINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 WDWHAK 9
W+WH +
Sbjct: 317 WEWHER 322


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GGWDW 6
G WDW
Sbjct: 441 GSWDW 445


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 WDWHAK 9
W+WH +
Sbjct: 317 WEWHER 322


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GGWDWHAKP 10
GWD H P
Sbjct: 83 AGWDMHGLP 91


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 GWDWHAKP 10
GWD H P
Sbjct: 84 GWDMHGLP 91


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GWDWHAKP 10
GWD H P
Sbjct: 84 GWDMHGLP 91


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 GWDWHAKP 10
GWD H P
Sbjct: 84 GWDMHGLP 91


>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 WDWHAK 9
W+WH +
Sbjct: 317 WEWHER 322


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GWDWHAKP 10
GWD H P
Sbjct: 84 GWDMHGLP 91


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 GGWD---WHAKP 10
G WD WHA+P
Sbjct: 870 GRWDRIGWHAEP 881


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 GWDWHAKP 10
GWD H P
Sbjct: 82 GWDCHGLP 89


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 4 WDWHAKP 10
W++ AKP
Sbjct: 619 WEFRAKP 625


>sp|GLMD_THEKO|GLUCOSAMINE-6-PHOSPHATE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 WDWHAK 9
+DWH K
Sbjct: 250 FDWHEK 255


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 1 SGGWDWHA 8
+GG +WHA
Sbjct: 323 AGGENWHA 330


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GGWDWHAKP 10
GWD H P
Sbjct: 83 AGWDMHGLP 91


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GWDWHAKP 10
GWD H P
Sbjct: 79 GWDMHGLP 86


>sp|PHR_HALSA|DEOXYRIBODIPYRIMIDINE photo-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SGGWDWHA 8
+GGW W A
Sbjct: 387 NGGWQWAA 394


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 4 WDWHAK 9
W+W AK
Sbjct: 335 WEWLAK 340


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 GWDWHAKP 10
GWD H P
Sbjct: 80 GWDCHGLP 87


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 GWDWHAKP 10
GWD H P
Sbjct: 83 GWDCHGLP 90


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GWDWHAKP 10
GWD H P
Sbjct: 79 GWDCHGLP 86


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 GWDWHAKP 10
GWD H P
Sbjct: 85 GWDTHGLP 92


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 GWDWHAKP 10
GWD H P
Sbjct: 85 GWDTHGLP 92


>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GGWDWHAK 9
GW W K
Sbjct: 22 AGWVWEVK 29


>sp|Y1571_ARCFU|UNCHARACTERIZED protein AF_1571|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GWDW 6
GWDW
Sbjct: 154 GWDW 157


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 GWDWHAKP 10
GWD H P
Sbjct: 83 GWDCHGLP 90


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GWDWHAKP 10
GWD H P
Sbjct: 83 GWDCHGLP 90


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GWDWHAKP 10
GWD H P
Sbjct: 83 GWDCHGLP 90


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 3 GWDWH 7
W+WH
Sbjct: 57 AWNWH 61


>sp|Y828_PYRHO|PUTATIVE gamma-glutamylcyclotransferase PH0828|Pyrococcus horikoshii (strain

Query: 4 WDWHAKP 10
W+W +KP
Sbjct: 96 WEWGSKP 102


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GGWDWHAKP 10
GGWD P
Sbjct: 85 GGWDMQGMP 93


>sp|GLCS_SACS2|GLUCOSE-BINDING protein GlcS|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GWDWHAKP 10
G DW+A+P
Sbjct: 410 GTDWYAQP 417


>sp|FAU1_PYRCJ|PROBABLE ribonuclease FAU-1|Pyrobaculum calidifontis (strain DSM 21063

Query: 6 WHAKP 10
WH KP
Sbjct: 298 WHIKP 302


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 GWDWHAKP 10
GWD H P
Sbjct: 84 GWDCHGLP 91


>sp|MTRH_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina barkeri (strain Fusaro

Query: 1 SGGWDWHAK 9
+ WDW K
Sbjct: 232 ASAWDWLRK 240


>sp|MTRH_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina acetivorans (strain

Query: 1 SGGWDWHAK 9
+ WDW K
Sbjct: 232 ASAWDWLRK 240




129|Sequence|641|650|WHAKPGGFGM

>sp|FLPA_METJA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanocaldococcus jannaschii

Query: 1 WHAKPGGFGM 10
W K GG+GM
Sbjct: 166 WFLKKGGYGM 175


>sp|FLPA_META3|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus aeolicus (strain

Query: 1 WHAKPGGFGM 10
W K GG+GM
Sbjct: 167 WFLKEGGYGM 176


>sp|FLPA_METVO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus voltae

Query: 1 WHAKPGGFGM 10
W K GG+GM
Sbjct: 164 WFLKKGGYGM 173


>sp|SUDHB_PYRFU|SULFIDE dehydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HAKPGGFGM 10
HAKPG F M
Sbjct: 27 HAKPGQFVM 35


>sp|HYD2A_PYRFU|SULFHYDROGENASE 2 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 4 KPGGFG 9
KPGGFG
Sbjct: 160 KPGGFG 165


>sp|NPPNK_METMP|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanococcus maripaludis (strain DSM

Query: 1 WHAKPGGFGM 10
W KP FG+
Sbjct: 283 WRIKPTNFGI 292


>sp|Y476_PYRFU|PROTEIN PF0476|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HAKPGGFG 9
H+ P GFG
Sbjct: 212 HSSPKGFG 219


>sp|Y439_PYRHO|PROTEIN PH0439|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HAKPGGFG 9
H+ P GFG
Sbjct: 215 HSSPKGFG 222


>sp|Y1593_PYRAB|PROTEIN PYRAB15930|Pyrococcus abyssi (strain GE5 /

Query: 2 HAKPGGFG 9
H+ P GFG
Sbjct: 212 HSSPKGFG 219


>sp|Y1472_THEKO|PROTEIN TK1472|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HAKPGGFG 9
H+ P GFG
Sbjct: 212 HSSPKGFG 219


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 5 PGGFGM 10
PGGFG+
Sbjct: 346 PGGFGI 351


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 PGGFGM 10
PGGFG+
Sbjct: 347 PGGFGV 352


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 3 AKPGGFG 9
A PGGFG
Sbjct: 232 AIPGGFG 238


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 3 AKPGGFG 9
A PGGFG
Sbjct: 238 AVPGGFG 244


>sp|RL5_NANEQ|LARGE ribosomal subunit protein uL5|Nanoarchaeum equitans (strain

Query: 1 WHAKPG 6
WH +PG
Sbjct: 53 WHIRPG 58


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 3 AKPGGFG 9
A PGGFG
Sbjct: 228 AIPGGFG 234


>sp|COXX_THEPD|PROTOHEME IX farnesyltransferase|Thermofilum pendens (strain DSM 2475

Query: 1 WHAKPGGFG 9
W A GGFG
Sbjct: 151 WAAATGGFG 159


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 AKPGGF 8
+KPGGF
Sbjct: 345 SKPGGF 350


>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 PGGFG 9
PGGFG
Sbjct: 345 PGGFG 349


>sp|PYRG_THEKO|CTP synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 PGGFG 9
PGGFG
Sbjct: 349 PGGFG 353


>sp|PYRG_THEGJ|CTP synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 5 PGGFG 9
PGGFG
Sbjct: 349 PGGFG 353


>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 PGGFG 9
PGGFG
Sbjct: 345 PGGFG 349


>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 PGGFG 9
PGGFG
Sbjct: 349 PGGFG 353


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 PGGFG 9
PGGFG
Sbjct: 349 PGGFG 353


>sp|PYRG_PYRAB|CTP synthase|Pyrococcus abyssi (strain GE5 /

Query: 5 PGGFG 9
PGGFG
Sbjct: 349 PGGFG 353


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 5 PGGFG 9
PGGFG
Sbjct: 341 PGGFG 345


>sp|PYRG_NATPD|CTP synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 PGGFG 9
PGGFG
Sbjct: 361 PGGFG 365


>sp|PYRG_METMP|CTP synthase|Methanococcus maripaludis (strain DSM 14266

Query: 5 PGGFG 9
PGGFG
Sbjct: 355 PGGFG 359


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 PGGFG 9
PGGFG
Sbjct: 347 PGGFG 351


>sp|PYRG_METJA|CTP synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PGGFG 9
PGGFG
Sbjct: 358 PGGFG 362


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 5 PGGFG 9
PGGFG
Sbjct: 350 PGGFG 354


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 5 PGGFG 9
PGGFG
Sbjct: 347 PGGFG 351


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 PGGFG 9
PGGFG
Sbjct: 362 PGGFG 366


>sp|PYRG_HALMA|CTP synthase|Haloarcula marismortui (strain ATCC 43049

Query: 5 PGGFG 9
PGGFG
Sbjct: 362 PGGFG 366


>sp|PYRG_HALHT|CTP synthase|Haloarcula hispanica (strain ATCC 33960

Query: 5 PGGFG 9
PGGFG
Sbjct: 362 PGGFG 366


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PGGFG 9
PGGFG
Sbjct: 347 PGGFG 351


>sp|ENO_THEVO|ENOLASE volcanium (strain ATCC 51530

Query: 5 PGGFG 9
PGGFG
Sbjct: 29 PGGFG 33


>sp|DTDA_STAMF|D-AMINOACYL-TRNA deacylase|Staphylothermus marinus (strain ATCC 43588

Query: 5 PGGFGM 10
P GFGM
Sbjct: 13 PAGFGM 18


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 5 PGGFG 9
PGGFG
Sbjct: 349 PGGFG 353


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 3 AKPGGFG 9
A PGGFG
Sbjct: 225 AIPGGFG 231


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 PGGFG 9
PGGFG
Sbjct: 355 PGGFG 359


>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 AKPGGFGM 10
AK GGF M
Sbjct: 352 AKTGGFSM 359


>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 WHAKPGG 7
W+AK GG
Sbjct: 271 WNAKTGG 277


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 5 PGGFG 9
PGGFG
Sbjct: 353 PGGFG 357


>sp|IF2G_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 2 HAKPGG 7
H KPGG
Sbjct: 261 HEKPGG 266


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 PGGFG 9
PGGFG
Sbjct: 226 PGGFG 230


>sp|FAU1_PYRCJ|PROBABLE ribonuclease FAU-1|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 WHAKPGG 7
WH KP G
Sbjct: 298 WHIKPWG 304


>sp|TRMI_PYRAB|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 4 KPGGF 8
KPGGF
Sbjct: 185 KPGGF 189


>sp|FLPA_THESM|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus sibiricus (strain DSM

Query: 2 HAKPGGFGM 10
+ K GG+GM
Sbjct: 166 YLKSGGYGM 174


>sp|FLPA_THEKO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus kodakarensis (strain

Query: 2 HAKPGGFGM 10
+ K GG+GM
Sbjct: 166 YLKSGGYGM 174


>sp|IF5A_METTP|TRANSLATION initiation factor 5A|Methanothrix thermoacetophila (strain DSM

Query: 2 HAKPGGFG 9
H+KPG G
Sbjct: 30 HSKPGKHG 37


>sp|IF5A_METM5|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain C5 /

Query: 2 HAKPGGFG 9
H+KPG G
Sbjct: 32 HSKPGKHG 39


>sp|IF5A_METAR|TRANSLATION initiation factor 5A|Methanocella arvoryzae (strain DSM 22066

Query: 2 HAKPGGFG 9
H+KPG G
Sbjct: 30 HSKPGKHG 37


>sp|FLPA_PYRAB|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 HAKPGGFGM 10
+ K GG+GM
Sbjct: 167 YLKKGGYGM 175


>sp|FLPA_THEGJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus gammatolerans (strain

Query: 4 KPGGFGM 10
K GG+GM
Sbjct: 168 KSGGYGM 174


>sp|SYE_PYRFU|GLUTAMATE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 KPGGF 8
KPGGF
Sbjct: 467 KPGGF 471


>sp|IF5A_METMP|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain DSM 14266

Query: 2 HAKPGGFG 9
H+KPG G
Sbjct: 32 HSKPGKHG 39


>sp|FLPA_THEON|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus onnurineus (strain

Query: 4 KPGGFGM 10
K GG+GM
Sbjct: 168 KSGGYGM 174


>sp|SYW1_HALSA|TRYPTOPHAN--TRNA ligase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 WHAKPGG 7
WH + GG
Sbjct: 103 WHQQQGG 109


>sp|AROK_HALSA|SHIKIMATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 WHAKPG 6
WH PG
Sbjct: 264 WHENPG 269


>sp|AROK_HALS3|SHIKIMATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 WHAKPG 6
WH PG
Sbjct: 264 WHENPG 269


>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 5 PGGFG 9
PGGFG
Sbjct: 233 PGGFG 237


>sp|GCS2_HALMA|GLUTAMATE--CYSTEINE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 HAKPGGFGM 10
HA+ GFG+
Sbjct: 88 HAEANGFGI 96


>sp|IF5A_METM7|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain C7 /

Query: 2 HAKPGGFG 9
H+KPG G
Sbjct: 32 HSKPGKHG 39


>sp|IF5A_METM6|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain C6 /

Query: 2 HAKPGGFG 9
H+KPG G
Sbjct: 32 HSKPGKHG 39


>sp|HTPX1_METAC|PROTEASE HtpX homolog 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WHAKPGGFG 9
W A GGFG
Sbjct: 163 WAAIFGGFG 171


>sp|RS11_PYRAE|SMALL ribosomal subunit protein uS11|Pyrobaculum aerophilum (strain

Query: 5 PGGFGM 10
PGG+GM
Sbjct: 82 PGGYGM 87


>sp|RS11_PYRCJ|SMALL ribosomal subunit protein uS11|Pyrobaculum calidifontis (strain

Query: 5 PGGFGM 10
PGG+GM
Sbjct: 90 PGGYGM 95


>sp|RS11_PYRIL|SMALL ribosomal subunit protein uS11|Pyrobaculum islandicum (strain DSM

Query: 5 PGGFGM 10
PGG+GM
Sbjct: 88 PGGYGM 93


>sp|IF5A_METVS|TRANSLATION initiation factor 5A|Methanococcus vannielii (strain ATCC 35089

Query: 2 HAKPGGFG 9
H+KPG G
Sbjct: 32 HSKPGKHG 39


>sp|RS11_PYRAR|SMALL ribosomal subunit protein uS11|Pyrobaculum arsenaticum (strain

Query: 5 PGGFGM 10
PGG+GM
Sbjct: 87 PGGYGM 92




130|Sequence|646|655|GGFGMGSKSA

>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GGFGMGSK 8
GGFG+G++
Sbjct: 404 GGFGLGAE 411


>sp|SYD_PYRHO|ASPARTATE--TRNA(ASP) ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GGFGMGSK 8
GGFG+G++
Sbjct: 404 GGFGLGAE 411


>sp|SYD_PYRFU|ASPARTATE--TRNA(ASP) ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GGFGMGSK 8
GGFG+G++
Sbjct: 404 GGFGLGAE 411


>sp|SYD_PYRAB|ASPARTATE--TRNA(ASP) ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 GGFGMGSK 8
GGFG+G++
Sbjct: 404 GGFGLGAE 411


>sp|PRIS_METMA|DNA primase small subunit PriS|Methanosarcina mazei (strain ATCC

Query: 1 GGFGMGSKS 9
G FG GSKS
Sbjct: 192 GDFGTGSKS 200


>sp|PRIS_METAC|DNA primase small subunit PriS|Methanosarcina acetivorans (strain ATCC

Query: 1 GGFGMGSKS 9
G FG GSK+
Sbjct: 192 GDFGTGSKT 200


>sp|RL30E_ARCFU|LARGE ribosomal subunit protein eL30|Archaeoglobus fulgidus (strain

Query: 1 GGFGMGSKS 9
GG+ +GSKS
Sbjct: 15 GGYRLGSKS 23


>sp|PRIS_METBF|DNA primase small subunit PriS|Methanosarcina barkeri (strain Fusaro /

Query: 1 GGFGMGSKS 9
G FG GSK+
Sbjct: 192 GEFGTGSKT 200


>sp|RL10E_ARCFU|LARGE ribosomal subunit protein uL16|Archaeoglobus fulgidus (strain

Query: 3 FGMGSKSA 10
F MG+KSA
Sbjct: 33 FDMGNKSA 40




131|Sequence|651|660|GSKSAATSPT

>sp|HIS1_ARCFU|ATP phosphoribosyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GSKSAATSP 9
G+K ATSP
Sbjct: 241 GAKRIATSP 249




132|Sequence|656|665|ATSPTGSSHG

>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 2 TSPTGS 7
TSPTGS
Sbjct: 52 TSPTGS 57


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TSPTGS 7
TSPTGS
Sbjct: 45 TSPTGS 50


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 2 TSPTGS 7
TSPTGS
Sbjct: 52 TSPTGS 57


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 ATSPTGSSH 9
+ P GSSH
Sbjct: 1047 SAEPAGSSH 1055


>sp|Y1278_METJA|UNCHARACTERIZED protein MJ1278|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SPTGSSH 9
SPT SSH
Sbjct: 44 SPTESSH 50




133|Sequence|661|670|GSSHGTPTHQ

>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 SHGTPT 8
SHGTPT
Sbjct: 260 SHGTPT 265


>sp|GSA_METS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GSSHGTPT 8
GS++GTPT
Sbjct: 78 GSAYGTPT 85


>sp|RF1_HALVD|PEPTIDE chain release factor subunit|Haloferax volcanii (strain ATCC 29605

Query: 4 HGTPTHQ 10
H TPTH+
Sbjct: 348 HDTPTHE 354


>sp|RF1_HALLT|PEPTIDE chain release factor subunit|Halorubrum lacusprofundi (strain ATCC

Query: 2 SSHGTPTHQ 10
S H TP+H+
Sbjct: 347 SRHSTPSHE 355


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSSHGTPTHQ 10
GS++G PT +
Sbjct: 83 GSAYGCPTEK 92


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 4 HGTPTHQ 10
HG P H+
Sbjct: 273 HGDPNHE 279


>sp|KORB_ARCFU|2-OXOGLUTARATE synthase subunit KorB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GTPTHQ 10
G PTHQ
Sbjct: 200 GCPTHQ 205


>sp|CAS1_HALVD|CRISPR-ASSOCIATED endonuclease Cas1|Haloferax volcanii (strain ATCC 29605

Query: 2 SSHGTPTH 9
+ HG P H
Sbjct: 58 NKHGVPVH 65


>sp|GLMS_HALSA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Halobacterium salinarum (strain

Query: 2 SSHGTPTHQ 10
S+HG PT +
Sbjct: 72 STHGEPTRE 80




134|Sequence|666|675|TPTHQSKPQT

>sp|PGK_THESM|PHOSPHOGLYCERATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 3 THQSKP 8
THQSKP
Sbjct: 56 THQSKP 61


>sp|PGK_THEON|PHOSPHOGLYCERATE kinase|Thermococcus onnurineus (strain NA1)

Query: 3 THQSKP 8
THQSKP
Sbjct: 56 THQSKP 61


>sp|PGK_THEKO|PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 THQSKP 8
THQS+P
Sbjct: 56 THQSRP 61


>sp|PYLC_METMA|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TPTHQSKP 8
TPT Q KP
Sbjct: 124 TPTPQDKP 131


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PTHQSKPQ 9
P H S+PQ
Sbjct: 442 PFHPSRPQ 449


>sp|PGK_PYRWO|PHOSPHOGLYCERATE kinase|Pyrococcus woesei

Query: 3 THQSKP 8
THQ KP
Sbjct: 56 THQGKP 61


>sp|PGK_PYRHO|PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 THQSKP 8
THQ KP
Sbjct: 56 THQGKP 61


>sp|PGK_PYRFU|PHOSPHOGLYCERATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 THQSKP 8
THQ KP
Sbjct: 56 THQGKP 61


>sp|PGK_PYRAB|PHOSPHOGLYCERATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 THQSKP 8
THQ KP
Sbjct: 56 THQGKP 61


>sp|TSR3_VULDI|16S rRNA aminocarboxypropyltransferase|Vulcanisaeta distributa (strain

Query: 2 PTHQSKP 8
PTH KP
Sbjct: 101 PTHYGKP 107


>sp|DNAG_THEGJ|DNA primase DnaG|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PTHQSKPQ 9
P H+ KPQ
Sbjct: 329 PKHEPKPQ 336




135|Sequence|671|680|SKPQTLDPFA

>sp|DACZ_METJA|DIADENYLATE cyclase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SKPQTLDPFA 10
SKP L+PFA
Sbjct: 198 SKPLILNPFA 207


>sp|HEM1_PICTO|GLUTAMYL-TRNA reductase|Picrophilus torridus (strain ATCC 700027

Query: 1 SKPQTLDP 8
SKP+ +DP
Sbjct: 255 SKPENIDP 262


>sp|Y1393_METJA|UNCHARACTERIZED protein MJ1393|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SKPQTLDPF 9
S P LDPF
Sbjct: 345 SNPVILDPF 353


>sp|SYFA_METM5|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C5 /

Query: 2 KPQTLDPFA 10
+P+ L+PF
Sbjct: 449 RPEVLEPFG 457


>sp|Y2000_PYRAB|UNCHARACTERIZED protein Orf2|Pyrococcus abyssi (strain GE5 /

Query: 3 PQTLDPF 9
PQT+D F
Sbjct: 78 PQTIDEF 84


>sp|SYFA_METM7|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C7 /

Query: 2 KPQTLDPFA 10
+P+ L+PF
Sbjct: 449 RPEVLEPFG 457


>sp|SYFA_METMP|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 KPQTLDPFA 10
+P+ L+PF
Sbjct: 449 RPEVLEPFG 457


>sp|SYFA_METVS|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus vannielii (strain ATCC 35089

Query: 2 KPQTLDPFA 10
+P+ L+PF
Sbjct: 449 RPEVLEPFG 457


>sp|UDGA_SACS2|TYPE-4 uracil-DNA glycosylase|Saccharolobus solfataricus (strain ATCC

Query: 1 SKPQTLDPF 9
SKP TLD F
Sbjct: 191 SKPITLDNF 199


>sp|ACDG_METTH|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanothermobacter

Query: 2 KPQTLDP 8
KPQ +DP
Sbjct: 329 KPQAVDP 335


>sp|FLAD_METVO|PUTATIVE flagella-related protein D|Methanococcus voltae

Query: 3 PQTLDP 8
PQTL+P
Sbjct: 131 PQTLEP 136




136|Sequence|676|685|LDPFADLGTL

>sp|RS13_THEPD|SMALL ribosomal subunit protein uS13|Thermofilum pendens (strain DSM

Query: 1 LDPFADLGTL 10
LDP+ LGTL
Sbjct: 46 LDPYRLLGTL 55


>sp|OFOA_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Saccharolobus solfataricus (Sulfolobus

Query: 1 LDPFADLGT 9
+ PFA LGT
Sbjct: 454 ISPFAPLGT 462


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 2 DPFADLG 8
+PFADLG
Sbjct: 124 EPFADLG 130


>sp|Y1940_AERPE|UNCHARACTERIZED protein APE_1940.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 DPFADLGTL 10
+P A LGTL
Sbjct: 168 EPLAPLGTL 176


>sp|HMD_METJA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDPFADLGT 9
LDP A LGT
Sbjct: 309 LDPAALLGT 317


>sp|IF6_HALLT|TRANSLATION initiation factor 6|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LDPFADLGTL 10
LD ADLGT+
Sbjct: 172 LDVRADLGTI 181




137|Sequence|681|690|DLGTLGSSSF

>sp|PIMT_META3|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GTLGSSSF 10
GTLGSS F
Sbjct: 136 GTLGSSEF 143


>sp|IDI2_PYRAR|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DLGTLGSSSF 10
D+G LG +SF
Sbjct: 214 DVGGLGGTSF 223


>sp|RTCB_METTH|TRNA-SPLICING ligase RtcB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 GTLGSSSF 10
GT+G+SS+
Sbjct: 380 GTMGTSSY 387


>sp|IDI2_PICTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Picrophilus torridus (strain ATCC 700027

Query: 1 DLGTLGSSSF 10
D+G LG +SF
Sbjct: 212 DVGGLGGTSF 221


>sp|SYDND_METMA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DLGTLGSSS 9
DLGTLG +
Sbjct: 310 DLGTLGEHT 318


>sp|SYDND_METAC|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DLGTLGSSS 9
DLGTLG +
Sbjct: 310 DLGTLGEHT 318


>sp|RNP2_THEON|RIBONUCLEASE P protein component 2|Thermococcus onnurineus (strain NA1)

Query: 2 LGTLGSS 8
LGTLGS+
Sbjct: 46 LGTLGSA 52


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LGTLGSSS 9
LGTLGS +
Sbjct: 197 LGTLGSGN 204


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 2 LGTLGSSS 9
LGTLGS +
Sbjct: 692 LGTLGSGN 699


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LGTLGSSS 9
LGTLGS +
Sbjct: 197 LGTLGSGN 204


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 2 LGTLGSSS 9
LGTLGS +
Sbjct: 197 LGTLGSGN 204




138|Sequence|686|695|GSSSFASKPT

>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GSSSFASK 8
G +SFASK
Sbjct: 209 GGASFASK 216


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GSSSFASK 8
G +SFASK
Sbjct: 209 GGASFASK 216


>sp|GLMD_THEKO|GLUCOSAMINE-6-PHOSPHATE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GSSSFASKP 9
GSS F S+P
Sbjct: 43 GSSHFLSQP 51


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GSSSFASK 8
G S+FASK
Sbjct: 203 GGSAFASK 210


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GSSSFASK 8
G S+FASK
Sbjct: 203 GGSAFASK 210


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GSSSFASK 8
G S+FASK
Sbjct: 203 GGSAFASK 210




139|Sequence|691|700|ASKPTTPTGL

>sp|DNAG_SULTO|DNA primase DnaG|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SKPTTP 7
SKPTTP
Sbjct: 294 SKPTTP 299


>sp|Y020_SULAC|UPF0284 protein Saci_0020|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SKPTTPTGL 10
S P TPTG+
Sbjct: 65 SVPVTPTGI 73




140|Sequence|696|705|TPTGLGGGFP

>sp|Y1914_METTH|UPF0425 pyridoxal phosphate-dependent protein

Query: 3 TGLGGGFP 10
TGL GGFP
Sbjct: 35 TGLSGGFP 42


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 LGGGFP 10
LGGGFP
Sbjct: 268 LGGGFP 273


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 5 LGGGFP 10
LGGGFP
Sbjct: 270 LGGGFP 275


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 5 LGGGFP 10
LGGGFP
Sbjct: 270 LGGGFP 275


>sp|KADA_METMJ|ADENYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 TPTGLGGGFP 10
TPTG G P
Sbjct: 97 TPTGFLAGLP 106


>sp|Y1261_METTH|UPF0104 membrane protein MTH_1261|Methanothermobacter thermautotrophicus

Query: 1 TPTGLGGGFP 10
TP+ GGG P
Sbjct: 88 TPSARGGGEP 97


>sp|GSA_METM5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C5 /

Query: 5 LGGGFP 10
LGGGFP
Sbjct: 270 LGGGFP 275


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 5 LGGGFP 10
LGGGFP
Sbjct: 270 LGGGFP 275


>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 4 GLGGGFP 10
+GGGFP
Sbjct: 238 AIGGGFP 244


>sp|NEP1_PYRHO|RIBOSOMAL RNA small subunit methyltransferase|Pyrococcus horikoshii (strain

Query: 2 PTGLGGGFP 10
PT + GGFP
Sbjct: 178 PTVIVGGFP 186


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 LGGGFP 10
+GGGFP
Sbjct: 299 IGGGFP 304


>sp|CBIA_PICTO|COBYRINATE a,c-diamide synthase|Picrophilus torridus (strain ATCC 700027

Query: 5 LGGGFP 10
+GGGFP
Sbjct: 293 IGGGFP 298


>sp|Y916_METST|UPF0425 pyridoxal phosphate-dependent protein Msp_0916|Methanosphaera

Query: 3 TGLGGGF 9
TGL GGF
Sbjct: 34 TGLAGGF 40


>sp|GSA_METVS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus vannielii (strain ATCC 35089

Query: 5 LGGGFP 10
LGGGFP
Sbjct: 270 LGGGFP 275


>sp|CBIA_METVS|COBYRINATE a,c-diamide synthase|Methanococcus vannielii (strain ATCC 35089

Query: 5 LGGGFP 10
LGGG+P
Sbjct: 298 LGGGYP 303


>sp|CBIA_METM7|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C7 /

Query: 5 LGGGFP 10
LGGG+P
Sbjct: 298 LGGGYP 303


>sp|CBIA_METM5|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C5 /

Query: 5 LGGGFP 10
LGGG+P
Sbjct: 298 LGGGYP 303


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 LGGGFP 10
+GGGFP
Sbjct: 273 MGGGFP 278


>sp|LYSJ_SULAC|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfolobus

Query: 4 GLGGGFP 10
+GGGFP
Sbjct: 237 AIGGGFP 243


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 4 GLGGGFP 10
+GGGFP
Sbjct: 237 AIGGGFP 243


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GLGGGF 9
GLGGGF
Sbjct: 47 GLGGGF 52


>sp|GSA_SACI7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 LGGGFP 10
+GGGFP
Sbjct: 270 IGGGFP 275


>sp|GSA_SACI6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 LGGGFP 10
+GGGFP
Sbjct: 270 IGGGFP 275


>sp|GSA_SACI4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 LGGGFP 10
+GGGFP
Sbjct: 270 IGGGFP 275


>sp|GSA_SACI3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.27)

Query: 5 LGGGFP 10
+GGGFP
Sbjct: 270 IGGGFP 275


>sp|GSA_SACI2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 LGGGFP 10
+GGGFP
Sbjct: 270 IGGGFP 275


>sp|GSA_SACI1|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 LGGGFP 10
+GGGFP
Sbjct: 270 IGGGFP 275


>sp|AROK_ARCFU|SHIKIMATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PTGLGGGF 9
PTG+G F
Sbjct: 17 PTGIGSAF 24


>sp|GSA_SACS2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 LGGGFP 10
+GGGFP
Sbjct: 262 IGGGFP 267


>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 2 PTGLGGGFP 10
PT GGFP
Sbjct: 15 PTEAPGGFP 23


>sp|ARGD_METKA|ACETYLORNITHINE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 4 GLGGGFP 10
GLGGG P
Sbjct: 246 GLGGGVP 252


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GLGGGFP 10
+GGGFP
Sbjct: 260 AIGGGFP 266


>sp|PUR2_METJA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TGLGGG 8
TGLGGG
Sbjct: 183 TGLGGG 188


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 2 PTGLGGGF 9
PTGLG F
Sbjct: 307 PTGLGKTF 314


>sp|ARGD_METMA|ACETYLORNITHINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GLGGGFP 10
+GGGFP
Sbjct: 260 AIGGGFP 266


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PTGLGGGF 9
PT + GGF
Sbjct: 1008 PTKISGGF 1015


>sp|CBIA_THEAC|COBYRINATE a,c-diamide synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 LGGGFP 10
LGGG+P
Sbjct: 291 LGGGYP 296


>sp|CSM5_METJA|CRISPR system Cms protein Csm5|Methanocaldococcus jannaschii (strain ATCC

Query: 4 GLGGGF 9
G GGGF
Sbjct: 338 GFGGGF 343


>sp|Y002_METMP|UPF0425 pyridoxal phosphate-dependent protein MMP0002|Methanococcus

Query: 3 TGLGGGF 9
TGL GGF
Sbjct: 33 TGLCGGF 39


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 LGGGFP 10
+GGG+P
Sbjct: 286 IGGGYP 291


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 LGGGFP 10
+GGG+P
Sbjct: 284 IGGGYP 289


>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 LGGGFP 10
+GGG+P
Sbjct: 292 IGGGYP 297


>sp|CBIA_METJA|COBYRINATE a,c-diamide synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 5 LGGGFP 10
+GGG+P
Sbjct: 294 IGGGYP 299


>sp|RNH2_METS3|RIBONUCLEASE HII|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 GLGGGFP 10
G+G G+P
Sbjct: 166 GIGSGYP 172


>sp|Y2265_METBU|PUTATIVE nickel insertion protein|Methanococcoides burtonii (strain DSM 6242

Query: 1 TPTGLGGG 8
TP +GGG
Sbjct: 145 TPVNVGGG 152


>sp|GSA_METS5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Metallosphaera sedula (strain ATCC 51363

Query: 5 LGGGFP 10
+GGGFP
Sbjct: 261 IGGGFP 266


>sp|GSA_CALMQ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Caldivirga maquilingensis (strain ATCC 700844

Query: 5 LGGGFP 10
+GGGFP
Sbjct: 267 IGGGFP 272


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 LGGGFP 10
+GGGFP
Sbjct: 264 VGGGFP 269


>sp|CBIA_METST|COBYRINATE a,c-diamide synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 LGGGFP 10
+GGG+P
Sbjct: 296 IGGGYP 301


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TPTGLG 6
TPTG+G
Sbjct: 417 TPTGIG 422


>sp|LYSJ_THEKO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 4 GLGGGFP 10
G+G GFP
Sbjct: 231 GIGNGFP 237


>sp|RNZ_SULAC|RIBONUCLEASE Z|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 GLGGGFP 10
G+GGG P
Sbjct: 8 GVGGGAP 14


>sp|IDI2_SULTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 TGLGGGFP 10
TG+ GG P
Sbjct: 65 TGMTGGLP 72


>sp|GSA_METTP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 LGGGFP 10
+GGGFP
Sbjct: 274 IGGGFP 279


>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 LGGGFP 10
+GGGFP
Sbjct: 275 IGGGFP 280


>sp|Y441_METJA|PROBABLE membrane transporter protein MJ0441|Methanocaldococcus jannaschii

Query: 4 GLGGGF 9
G+GGGF
Sbjct: 31 GIGGGF 36


>sp|GSA_HYPBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Hyperthermus butylicus (strain DSM 5456

Query: 5 LGGGFP 10
+GGGFP
Sbjct: 267 VGGGFP 272


>sp|CBIA_THEVO|COBYRINATE a,c-diamide synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 LGGGFP 10
+GGG+P
Sbjct: 291 IGGGYP 296


>sp|DTDA_STAMF|D-AMINOACYL-TRNA deacylase|Staphylothermus marinus (strain ATCC 43588

Query: 3 TGLGGG 8
TG+GGG
Sbjct: 194 TGVGGG 199


>sp|GSA_NATPD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 LGGGFP 10
+GGGFP
Sbjct: 266 IGGGFP 271


>sp|CSG_METMA|MAJOR S-layer protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TPTGLGGG 8
T TGL GG
Sbjct: 352 TVTGLNGG 359


>sp|APE1_AERPE|HOMING endonuclease I-ApeI|Aeropyrum pernix (strain ATCC 700893

Query: 4 GLGGGFP 10
G+GGG P
Sbjct: 209 GIGGGAP 215




141|Sequence|701|710|GGGFPPLSSP

>sp|CBIA_PICTO|COBYRINATE a,c-diamide synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 GGGFPPL 7
GGGFP L
Sbjct: 294 GGGFPEL 300


>sp|COAD_METKA|PHOSPHOPANTETHEINE adenylyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 GFPPLS 8
GFPPLS
Sbjct: 120 GFPPLS 125


>sp|T1M1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 2 GGFPPLSS 9
GG+PP S
Sbjct: 382 GGYPPKQS 389


>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 1 GGGFPPLSSP 10
GG FP + P
Sbjct: 123 GGAFPTMPYP 132


>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 1 GGGFP 5
GGGFP
Sbjct: 240 GGGFP 244


>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 2 GGFPPLSS 9
GGF PL S
Sbjct: 611 GGFDPLKS 618


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGGFP 5
GGGFP
Sbjct: 300 GGGFP 304


>sp|RNH2_NATPD|RIBONUCLEASE HII|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GGFPP 6
GGFPP
Sbjct: 184 GGFPP 188


>sp|LYSJ_SULAC|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfolobus

Query: 1 GGGFP 5
GGGFP
Sbjct: 239 GGGFP 243


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 1 GGGFP 5
GGGFP
Sbjct: 239 GGGFP 243


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 3 GFPPLSSP 10
G PP+ SP
Sbjct: 388 GCPPIKSP 395


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GGGFPPLSSP 10
GG PP P
Sbjct: 405 GGAVPPRGKP 414


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GGGFPPLSSP 10
GG PP +P
Sbjct: 401 GGAVPPPGTP 410


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 2 GGFPPLSSP 10
G F PLS+P
Sbjct: 189 GAFNPLSAP 197


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GGGFP 5
GGGFP
Sbjct: 262 GGGFP 266


>sp|ARGD_METMA|ACETYLORNITHINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GGGFP 5
GGGFP
Sbjct: 262 GGGFP 266


>sp|RADB_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis

Query: 1 GGGFPP 6
GGGF P
Sbjct: 14 GGGFAP 19


>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GGGFPPLSSP 10
GG P LS P
Sbjct: 347 GGSQPSLSGP 356


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 GGGFPPLSS 9
GGGF P+++
Sbjct: 4387 GGGFEPIAN 4395


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GGGFPPLSS 9
GGG PP S+
Sbjct: 370 GGGNPPGSN 378




142|Sequence|706|715|PLSSPQKASP

***** No hits found ******


143|Sequence|711|720|QKASPQPMGG

>sp|RNFD_METAC|ION-TRANSLOCATING oxidoreductase complex subunit D|Methanosarcina acetivorans (strain

Query: 2 KASPQPMGG 10
K P+PMGG
Sbjct: 276 KTLPKPMGG 284


>sp|Y1495_METJA|UNCHARACTERIZED protein MJ1495|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PQPMGG 10
PQPMG
Sbjct: 266 PQPMGA 271




144|Sequence|716|725|QPMGGGWQQG

>sp|ADEC_METTP|ADENINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 MGGGW 7
MGGGW
Sbjct: 479 MGGGW 483


>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QPMGGGW 7
P GGGW
Sbjct: 327 HPAGGGW 333


>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QPMGGGW 7
P GGGW
Sbjct: 327 HPAGGGW 333


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 QPMGGGW 7
P GGGW
Sbjct: 327 HPAGGGW 333


>sp|RNP3_HALLT|RIBONUCLEASE P protein component 3|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 QPMGGG 6
+PMGGG
Sbjct: 114 RPMGGG 119


>sp|CYAS_METAC|CYSTEATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PMGGGWQQG 10
PM WQ+G
Sbjct: 271 PMYNAWQEG 279


>sp|PRIS_PYRNV|DNA primase small subunit PriS|Pyrobaculum neutrophilum (strain DSM

Query: 1 QPMGGG 6
QP GGG
Sbjct: 30 QPFGGG 35


>sp|PRIS_PYRAR|DNA primase small subunit PriS|Pyrobaculum arsenaticum (strain DSM

Query: 1 QPMGGG 6
QP GGG
Sbjct: 30 QPFGGG 35


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 QPMGGG 6
QP GGG
Sbjct: 249 QPFGGG 254


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 QPMGGG 6
QP GGG
Sbjct: 249 QPFGGG 254


>sp|Y797_METJA|UNCHARACTERIZED ABC transporter permease MJ0797|Methanocaldococcus jannaschii

Query: 3 MGGGWQQG 10
+GGG +QG
Sbjct: 37 LGGGLKQG 44


>sp|COBQ_THEAC|PROBABLE cobyric acid synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 MGGGWQQG 10
M G W++G
Sbjct: 370 MSGTWEEG 377


>sp|AROE_METAR|SHIKIMATE dehydrogenase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 2 PMGGGWQ 8
P+G GW+
Sbjct: 188 PIGMGWE 194


>sp|G1PDH_METMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GGGWQQ 9
GG WQ+
Sbjct: 289 GGNWQE 294


>sp|G1PDH_METBF|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina barkeri (strain Fusaro /

Query: 4 GGGWQQ 9
GG WQ+
Sbjct: 289 GGNWQE 294


>sp|G1PDH_METAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina acetivorans (strain ATCC

Query: 4 GGGWQQ 9
GG WQ+
Sbjct: 289 GGNWQE 294




145|Sequence|721|730|GWQQGGAYNW

>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 GWQQGGAY 8
GW +GGA+
Sbjct: 976 GWGEGGAH 983


>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GWQQGGAYN 9
GW++ YN
Sbjct: 629 GWEETAIYN 637


>sp|PYRDB_SACS2|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Saccharolobus solfataricus

Query: 5 GGAYNW 10
GG Y+W
Sbjct: 229 GGVYDW 234


>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 5 GGAYNW 10
GGA++W
Sbjct: 353 GGAFSW 358


>sp|TF2B2_HALVD|TRANSCRIPTION initiation factor IIB 2|Haloferax volcanii (strain ATCC 29605

Query: 1 GWQQGGAY 8
GWQ AY
Sbjct: 105 GWQNKDAY 112


>sp|Y1589_METJA|UNCHARACTERIZED protein MJ1589|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GWQQGGAY 8
GW GG Y
Sbjct: 102 GWYVGGIY 109


>sp|TF2B2_HALSA|TRANSCRIPTION initiation factor IIB 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 GWQQGGAY 8
GWQ AY
Sbjct: 100 GWQDKDAY 107


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 2 WQQGGAY 8
W++GG Y
Sbjct: 530 WREGGVY 536


>sp|TF2B4_HALSA|TRANSCRIPTION initiation factor IIB 4|Halobacterium salinarum (strain ATCC 700922

Query: 1 GWQQGGAY 8
GWQ AY
Sbjct: 100 GWQDKDAY 107


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 2 WQQGGAYNW 10
W G Y W
Sbjct: 593 WDNGHIYTW 601


>sp|Y066_METJA|UNCHARACTERIZED protein MJ0066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GWQQGGAYNW 10
GW + G + W
Sbjct: 466 GWIKKGLWRW 475


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 2 WQQGGAYNW 10
W+ GG +W
Sbjct: 106 WKNGGIPDW 114




146|Sequence|726|735|GAYNWQQPQP

>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 YNWQQPQP 10
Y+W QP P
Sbjct: 115 YHWPQPHP 122


>sp|LYSY_PYRCJ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 YNWQQPQP 10
Y W QP P
Sbjct: 113 YKWPQPHP 120


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 YNWQQPQP 10
Y W+ P P
Sbjct: 113 YGWEHPHP 120


>sp|LYSY_CENSY|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 YNWQQPQP 10
Y W+ P P
Sbjct: 113 YGWEHPHP 120


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 YNWQQPQP 10
Y W QP P
Sbjct: 112 YKWPQPHP 119


>sp|LYSY_PYRIL|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 YNWQQPQP 10
Y W QP P
Sbjct: 113 YKWPQPHP 120


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 2 AYNWQQPQ 9
A+NW +PQ
Sbjct: 57 AWNWHEPQ 64


>sp|LYSY_PYRNV|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 YNWQQPQP 10
Y W QP P
Sbjct: 113 YKWPQPHP 120


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 1 GAYNWQQPQP 10
G NW P+P
Sbjct: 345 GPKNWHLPRP 354


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 1 GAYNWQQPQP 10
G NW P+P
Sbjct: 345 GPKNWHLPRP 354


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 NWQQPQP 10
NW P+P
Sbjct: 527 NWSPPEP 533


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 2 AYNWQQPQ 9
A+NW +P+
Sbjct: 55 AWNWHEPE 62


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 3 YNWQQPQP 10
Y W P+P
Sbjct: 411 YVWADPEP 418


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 AYNWQQP 8
A+ W+QP
Sbjct: 334 AFGWEQP 340


>sp|Y505_METJA|UNCHARACTERIZED protein MJ0505|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YNWQQPQP 10
Y W P+P
Sbjct: 192 YTWYLPKP 199


>sp|LYSY_SACS2|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 YNWQQPQP 10
YN++ P P
Sbjct: 117 YNYEHPYP 124


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 3 YNWQQPQP 10
Y W P+P
Sbjct: 411 YVWADPEP 418


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 GAYNWQ 6
GAY+W+
Sbjct: 58 GAYSWE 63


>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 1 GAYNWQQP 8
GA++W+ P
Sbjct: 354 GAFSWRVP 361


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 5 WQQPQP 10
WQ P+P
Sbjct: 519 WQPPKP 524


>sp|RS27A_METJA|SMALL ribosomal subunit protein eS31|Methanocaldococcus jannaschii

Query: 1 GAYNWQQPQ 9
G W+QPQ
Sbjct: 49 GYMEWKQPQ 57




147|Sequence|731|740|QQPQPKPQPS

>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QQPQPKPQPS 10
+ P P P+P+
Sbjct: 152 KNPTPAPEPA 161


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 QQPQPKPQ 8
++P+PKP+
Sbjct: 207 REPEPKPE 214


>sp|KTHY_METKA|PROBABLE thymidylate kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 QQPQPKP 7
Q+P PKP
Sbjct: 106 QRPVPKP 112


>sp|Y939_SULTO|KELCH domain-containing protein STK_09390|Sulfurisphaera tokodaii (strain

Query: 3 PQPKPQ 8
P PKPQ
Sbjct: 315 PPPKPQ 320


>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 PQPKPQP 9
PQP P P
Sbjct: 118 PQPHPYP 124


>sp|LYSY_PYRCJ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 PQPKPQP 9
PQP P P
Sbjct: 116 PQPHPYP 122


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 PQPKPQP 9
PQP P P
Sbjct: 115 PQPHPYP 121


>sp|LYSY_PYRIL|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 PQPKPQP 9
PQP P P
Sbjct: 116 PQPHPYP 122


>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 3 PQPKPQP 9
P+PKP P
Sbjct: 20 PEPKPGP 26


>sp|LYSY_PYRNV|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 PQPKPQP 9
PQP P P
Sbjct: 116 PQPHPYP 122


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 PQPKPQP 9
P P PQP
Sbjct: 306 PAPAPQP 312


>sp|DNAG_THEGJ|DNA primase DnaG|Thermococcus gammatolerans (strain DSM 15229

Query: 4 QPKPQP 9
+PKPQP
Sbjct: 332 EPKPQP 337




148|Sequence|736|745|KPQPSMPHSS

>sp|RIBL_FERPA|FAD synthase|Ferroglobus placidus (strain DSM 10642

Query: 1 KPQPSMP 7
KP+P MP
Sbjct: 44 KPKPIMP 50


>sp|KAE1_CALMQ|TRNA N6-adenosine threonylcarbamoyltransferase|Caldivirga maquilingensis

Query: 2 PQPSMPH 8
P P +PH
Sbjct: 170 PNPGVPH 176




149|Sequence|741|750|MPHSSPQNRP

>sp|HEM12_PYRAR|GLUTAMYL-TRNA reductase 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PHSSPQN 8
PH PQN
Sbjct: 392 PHGEPQN 398


>sp|MFNA_METMA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina mazei (strain

Query: 1 MPHSSPQN 8
MPH+SP++
Sbjct: 373 MPHNSPED 380


>sp|Y162_ARCFU|UNCHARACTERIZED protein AF_0162|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PHSSPQ 7
PH+SPQ
Sbjct: 109 PHTSPQ 114


>sp|Y920_THESM|UPF0200 protein TSIB_0920|Thermococcus sibiricus (strain DSM 12597

Query: 3 HSSPQNR 9
HSSPQ R
Sbjct: 113 HSSPQKR 119


>sp|SPEH_SACS2|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus solfataricus (strain ATCC

Query: 2 PHSSPQN 8
PH+SP N
Sbjct: 93 PHTSPLN 99


>sp|Y400_METKA|UPF0200 protein MK0400|Methanopyrus kandleri (strain AV19 /

Query: 3 HSSPQNR 9
H+SPQ R
Sbjct: 108 HASPQTR 114


>sp|DPS_HALSA|DNA protection during starvation protein|Halobacterium salinarum

Query: 1 MPHSSPQ 7
+PH+SP+
Sbjct: 91 VPHASPE 97




150|Sequence|746|755|PQNRPNYNVS

>sp|CFBE_METBF|COENZYME F(430) synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 4 RPNYNVS 10
RP YNVS
Sbjct: 363 RPGYNVS 369


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 2 QNRPNYNV 9
+NRP+YN+
Sbjct: 82 KNRPHYNI 89


>sp|IDI2_SULTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PQNRPNYNV 9
P+ PNY++
Sbjct: 165 PEGEPNYSI 173


>sp|MOAA_PYRAE|PROBABLE GTP 3',8-cyclase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 QNRPNYNVS 10
NRP YN++
Sbjct: 227 HNRPLYNIA 235


>sp|RL5_METBU|LARGE ribosomal subunit protein uL5|Methanococcoides burtonii (strain DSM

Query: 3 NRPNYNVS 10
NRP Y VS
Sbjct: 129 NRPGYRVS 136


>sp|FAU1_SACS2|PROBABLE ribonuclease FAU-1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PQNRPNYNV 9
P NR YNV
Sbjct: 165 PLNRKGYNV 173


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 QNRPNYNVS 10
+N P++NVS
Sbjct: 451 ENAPDWNVS 459


>sp|CBSB_SULAC|CYTOCHROME b558/566 subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 PNYNVS 10
PNYN+S
Sbjct: 94 PNYNMS 99


>sp|FAU1_SACI2|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PQNRPNYNV 9
P NR YNV
Sbjct: 165 PLNRKGYNV 173


>sp|FAU1_SACI6|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PQNRPNYNV 9
P NR YNV
Sbjct: 165 PLNRKGYNV 173


>sp|FAU1_SACI4|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PQNRPNYNV 9
P NR YNV
Sbjct: 165 PLNRKGYNV 173


>sp|FAU1_SACI3|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.27)

Query: 1 PQNRPNYNV 9
P NR YNV
Sbjct: 165 PLNRKGYNV 173


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 1 PQNRPNYN 8
PQ PN N
Sbjct: 281 PQREPNMN 288


>sp|FAU1_SACI7|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PQNRPNYNV 9
P NR YNV
Sbjct: 165 PLNRKGYNV 173


>sp|GLMM_PYRFU|PROBABLE phosphoglucosamine mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QNRPNYN 8
N PNYN
Sbjct: 97 HNPPNYN 103


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PQNRPNYN 8
PQ PN N
Sbjct: 282 PQREPNMN 289


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 RPNYNVS 10
RP+YN+S
Sbjct: 86 RPHYNIS 92




151|Sequence|751|760|NYNVSFSAMP

>sp|RPO2N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanococcus vannielii (strain ATCC

Query: 3 NVSFSAMP 10
NVSF MP
Sbjct: 209 NVSFPGMP 216


>sp|NADM_METMP|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NYNVSFSAMP 10
NY++++ A+P
Sbjct: 62 NYDINYYAIP 71


>sp|NADM_METM7|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 NYNVSFSAMP 10
NY++++ A+P
Sbjct: 62 NYDINYYAIP 71


>sp|NADM_METM5|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 NYNVSFSAMP 10
NY++++ A+P
Sbjct: 62 NYDINYYAIP 71


>sp|NADM_METM6|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 NYNVSFSAMP 10
NY++++ A+P
Sbjct: 62 NYDINYYAIP 71


>sp|HEM1_METS5|GLUTAMYL-TRNA reductase|Metallosphaera sedula (strain ATCC 51363

Query: 1 NYNVSFSAM 9
NY++ FSA+
Sbjct: 239 NYDIIFSAI 247


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YNVSFSAMP 10
YN +FS +P
Sbjct: 763 YNFTFSGVP 771


>sp|AROA_SACS2|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 NYNVSFSA 8
NY +SFS+
Sbjct: 124 NYGISFSS 131


>sp|MV3K_PICTO|MEVALONATE-3-KINASE torridus (strain ATCC 700027

Query: 1 NYNVSFSAMP 10
NYNV A P
Sbjct: 3 NYNVKTRAFP 12


>sp|AROA_SACI3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 NYNVSFSA 8
NY +SFS+
Sbjct: 124 NYGISFSS 131


>sp|AROA_SACI6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NYNVSFSA 8
NY +SFS+
Sbjct: 124 NYGISFSS 131


>sp|AROA_SACI4|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 1 NYNVSFSA 8
NY +SFS+
Sbjct: 124 NYGISFSS 131


>sp|AROA_SACI7|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain

Query: 1 NYNVSFSA 8
NY +SFS+
Sbjct: 124 NYGISFSS 131


>sp|AROA_SACI2|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 NYNVSFSA 8
NY +SFS+
Sbjct: 124 NYGISFSS 131


>sp|AROA_SACI1|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain

Query: 1 NYNVSFSA 8
NY +SFS+
Sbjct: 124 NYGISFSS 131




152|Sequence|756|765|FSAMPGGQNE

>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 FSAMPGGQNE 10
F MPGG++E
Sbjct: 599 FREMPGGEDE 608


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 FSAMPGGQNE 10
F MPGG++E
Sbjct: 596 FREMPGGEDE 605


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FSAMPGGQNE 10
F MPGG++E
Sbjct: 596 FREMPGGEDE 605


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 1 FSAMPGGQNE 10
+ MPG +NE
Sbjct: 521 YRKMPGNKNE 530


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 1 FSAMPGGQNE 10
F + GG+NE
Sbjct: 973 FRGLEGGENE 982


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 1 FSAMPGGQNE 10
F + GG+NE
Sbjct: 573 FKTLEGGENE 582


>sp|CAS7_THETK|CRISPR-ASSOCIATED protein Cas7/Cst2/DevR|Thermoproteus tenax (strain ATCC 35583

Query: 3 AMPGGQ 8
A+PGGQ
Sbjct: 320 ALPGGQ 325




153|Sequence|761|770|GGQNERGKGS

>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 1 GGQNERGKG 9
GG+ ERGKG
Sbjct: 91 GGKVERGKG 99


>sp|MPTA_METTP|GTP cyclohydrolase MptA|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 QNERGKGS 10
N+RG+GS
Sbjct: 196 HNQRGRGS 203


>sp|RTCA_SULTO|RNA 3'-terminal phosphate cyclase|Sulfurisphaera tokodaii (strain DSM

Query: 3 QNERGKGS 10
+NER KGS
Sbjct: 227 ENERSKGS 234


>sp|Y1223_METJA|UNCHARACTERIZED protein MJ1223|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGQNERGK 8
GG NE+ K
Sbjct: 82 GGDNEKAK 89


>sp|PUR7_THESM|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermococcus sibiricus (strain DSM 12597

Query: 2 GQNERGK 8
G+NERG+
Sbjct: 179 GKNERGE 185


>sp|PGP_PYRFU|PHOSPHOGLYCOLATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 QNERGKG 9
QNE GKG
Sbjct: 210 QNEYGKG 216




154|Sequence|766|775|RGKGSSNLEG

>sp|PYRB_METTP|ASPARTATE carbamoyltransferase catalytic subunit|Methanothrix

Query: 1 RGKGSSNLEG 10
RGKGS LEG
Sbjct: 33 RGKGSDILEG 42


>sp|RPO3_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo3|Aeropyrum pernix (strain ATCC 700893

Query: 2 GKGSSNLEG 10
GKGS LEG
Sbjct: 208 GKGSLVLEG 216




155|Sequence|771|780|SNLEGKQKAA

>sp|APGM1_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SNLEGKQKAA 10
+NLE K KAA
Sbjct: 275 TNLEAKVKAA 284




156|Sequence|776|785|KQKAADFEDL

>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KQKAADFEDL 10
K A DF+DL
Sbjct: 421 KSVAGDFQDL 430


>sp|RL10_METST|LARGE ribosomal subunit protein uL10|Methanosphaera stadtmanae (strain

Query: 1 KQKAADFEDL 10
K+K A+ EDL
Sbjct: 9 KEKVAELEDL 18


>sp|Y1136_SULTO|PUTATIVE ABC transporter ATP-binding protein|Sulfurisphaera tokodaii (strain

Query: 3 KAADFEDL 10
K DFEDL
Sbjct: 229 KEVDFEDL 236




157|Sequence|781|790|DFEDLLSGQG

>sp|RL10_STAMF|LARGE ribosomal subunit protein uL10|Staphylothermus marinus (strain

Query: 2 FEDLLSGQ 9
FE+LL+GQ
Sbjct: 81 FEELLTGQ 88


>sp|THTR_HALVD|PUTATIVE thiosulfate sulfurtransferase|Haloferax volcanii (strain ATCC

Query: 1 DFEDLLSGQG 10
DFEDLL G
Sbjct: 73 DFEDLLGSHG 82


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 2 FEDLLSGQ 9
F+DL SGQ
Sbjct: 683 FDDLASGQ 690


>sp|HIS4_METTH|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanothermobacter

Query: 1 DFEDLLSG 8
DFE LLSG
Sbjct: 169 DFEGLLSG 176


>sp|Y2020_ARCFU|UNCHARACTERIZED protein AF_2020|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DFEDLLS 7
DFE+LLS
Sbjct: 105 DFEELLS 111


>sp|AGLJ_HALVD|GLYCOSYLTRANSFERASE AglJ|Haloferax volcanii (strain ATCC 29605

Query: 1 DFEDLLSG 8
DF D+LSG
Sbjct: 145 DFRDILSG 152


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 2 FEDLLSGQ 9
F+DL SGQ
Sbjct: 683 FDDLASGQ 690


>sp|HISX_METAC|HISTIDINOL dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DFEDLLSGQG 10
+FE+ LSG G
Sbjct: 70 EFEEALSGVG 79


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 2 FEDLLSGQ 9
F+DL SGQ
Sbjct: 683 FDDLASGQ 690


>sp|MOAA_METMA|PROBABLE GTP 3',8-cyclase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DFEDLLS 7
DFED+L+
Sbjct: 96 DFEDILA 102


>sp|BRIX_METAC|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina

Query: 1 DFEDLLSGQG 10
D E +L+GQG
Sbjct: 91 DLEPVLAGQG 100


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DFEDLL 6
DFEDLL
Sbjct: 699 DFEDLL 704


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 2 FEDLLSGQ 9
F+DL SGQ
Sbjct: 672 FDDLASGQ 679


>sp|RL11_METAC|LARGE ribosomal subunit protein uL11|Methanosarcina acetivorans (strain

Query: 2 FEDLLSGQG 10
F+DLL+G+
Sbjct: 152 FDDLLAGEA 160


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 2 FEDLLSGQG 10
F DLL G G
Sbjct: 1113 FRDLLHGPG 1121


>sp|AATE_SULAC|A-TYPE ATP synthase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 1 DFEDLLS 7
DFE+LLS
Sbjct: 3 DFEELLS 9


>sp|CETZ_PYRAB|TUBULIN-LIKE protein CetZ|Pyrococcus abyssi (strain GE5 /

Query: 1 DFEDLLSGQ 9
DF+D+ SG+
Sbjct: 353 DFDDVYSGE 361


>sp|RL11_METBF|LARGE ribosomal subunit protein uL11|Methanosarcina barkeri (strain

Query: 2 FEDLLSGQ 9
F+DLL+G+
Sbjct: 152 FDDLLAGE 159


>sp|RL4_HALMA|LARGE ribosomal subunit protein uL4|Haloarcula marismortui (strain ATCC

Query: 1 DFEDLLSGQ 9
DFEDL+ Q
Sbjct: 143 DFEDLVKTQ 151


>sp|SRP54_HALMA|SIGNAL recognition particle 54 kDa|Haloarcula marismortui (strain ATCC

Query: 1 DFEDLLSGQ 9
D ED+L GQ
Sbjct: 317 DPEDMLEGQ 325


>sp|DCDA_METTH|DIAMINOPIMELATE decarboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 FEDLLSGQ 9
F DLL GQ
Sbjct: 412 FSDLLRGQ 419




158|Sequence|786|795|LSGQGFNAHK

>sp|MTIP_METAC|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanosarcina acetivorans

Query: 1 LSGQGFNAHK 10
L G GFN+HK
Sbjct: 13 LGGVGFNSHK 22


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LSGQGFNAHK 10
+SGQGF +K
Sbjct: 158 ISGQGFTVYK 167


>sp|SYS_METMA|SERINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LSGQGFNAHK 10
+SGQGF +K
Sbjct: 158 ISGQGFAVYK 167


>sp|HJE_SACS2|CROSSOVER junction endodeoxyribonuclease Hje|Saccharolobus solfataricus

Query: 1 LSGQGFNA 8
L G+GFNA
Sbjct: 17 LRGEGFNA 24


>sp|HJE_SACI5|CROSSOVER junction endodeoxyribonuclease Hje|Saccharolobus islandicus

Query: 1 LSGQGFNA 8
L G+GFNA
Sbjct: 17 LRGEGFNA 24


>sp|SYS_METAC|SERINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LSGQGFNAHK 10
++GQGF +K
Sbjct: 158 IAGQGFTVYK 167


>sp|CARA_THEVO|CARBAMOYL phosphate synthase small chain|Thermoplasma volcanium (strain

Query: 1 LSGQGFNAHK 10
LSGQG+ ++K
Sbjct: 13 LSGQGYGSYK 22


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSGQGFNAH 9
LSG F AH
Sbjct: 437 LSGTSFGAH 445


>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain ATCC

Query: 1 LSGQGFNAH 9
SG+GF+ H
Sbjct: 183 FSGRGFHIH 191


>sp|KORA_METJA|2-OXOGLUTARATE synthase subunit KorA|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GQGFNAH 9
G+G+N H
Sbjct: 215 GEGYNVH 221


>sp|HMDH_METTH|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 GFNAH 9
GFNAH
Sbjct: 282 GFNAH 286


>sp|HMDH_PYRAB|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus abyssi (strain GE5 /

Query: 5 GFNAH 9
GFNAH
Sbjct: 288 GFNAH 292


>sp|HMDH_METJA|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GFNAH 9
GFNAH
Sbjct: 291 GFNAH 295


>sp|TPIS_METMJ|TRIOSEPHOSPHATE isomerase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 GQGFNAHK 10
G G NAH+
Sbjct: 16 GMGSNAHR 23


>sp|HMDH_PYRHO|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 GFNAH 9
GFNAH
Sbjct: 293 GFNAH 297


>sp|MCRB_METVA|METHYL-COENZYME M reductase subunit beta|Methanococcus vannielii

Query: 3 GQGFNAHK 10
G GFN +K
Sbjct: 288 GSGFNMYK 295




159|Sequence|791|800|FNAHKDKKGP

>sp|XYLF_SULAC|XYLOSE/ARABINOSE-BINDING protein XylF|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FNAHKDKKG 9
FN+H D KG
Sbjct: 269 FNSHPDVKG 277


>sp|MTIP_METAC|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanosarcina acetivorans

Query: 1 FNAHKD 6
FN+HKD
Sbjct: 18 FNSHKD 23


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 1 FNAHKDKKG 9
FNA KD +G
Sbjct: 480 FNAAKDSQG 488


>sp|CBIA_PICTO|COBYRINATE a,c-diamide synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 NAHKDKKGP 10
NA+K ++GP
Sbjct: 398 NAYKTERGP 406


>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 1 FNAHKDK 7
+N HKDK
Sbjct: 385 YNTHKDK 391


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 1 FNAHKDKKG 9
FNA KD +G
Sbjct: 480 FNAAKDSQG 488


>sp|ARGJ_METM7|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 NAHKDKK 8
N HKD+K
Sbjct: 21 NGHKDRK 27


>sp|ARGJ_METMP|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 NAHKDKK 8
N HKD+K
Sbjct: 21 NGHKDRK 27


>sp|ARGJ_METVS|GLUTAMATE N-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 NAHKDKK 8
N HKD+K
Sbjct: 21 NGHKDRK 27


>sp|ARGJ_METM5|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 NAHKDKK 8
N HKD+K
Sbjct: 21 NGHKDRK 27


>sp|ARGJ_METM6|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 NAHKDKK 8
N HKD+K
Sbjct: 21 NGHKDRK 27


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FNAHKDK 7
FN HK+K
Sbjct: 387 FNTHKEK 393


>sp|RL3_PYRAB|LARGE ribosomal subunit protein uL3|Pyrococcus abyssi (strain GE5 /

Query: 3 AHKDKKG 9
AHKD KG
Sbjct: 240 AHKDSKG 246


>sp|RL3_PYRHO|LARGE ribosomal subunit protein uL3|Pyrococcus horikoshii (strain ATCC

Query: 3 AHKDKKG 9
AHKD KG
Sbjct: 241 AHKDSKG 247


>sp|RL3_PYRFU|LARGE ribosomal subunit protein uL3|Pyrococcus furiosus (strain ATCC

Query: 3 AHKDKKG 9
AHKD KG
Sbjct: 243 AHKDSKG 249


>sp|CCA_THEAI|CCA-ADDING enzyme|Thermoplasma acidophilum

Query: 2 NAHKDKKG 9
N H D+KG
Sbjct: 140 NGHLDEKG 147




160|Sequence|796|805|DKKGPRTIAE

>sp|GATB_METTH|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanothermobacter thermautotrophicus

Query: 1 DKKGPRTIA 9
+KKGPR IA
Sbjct: 373 NKKGPREIA 381


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 1 DKKGPRTIAE 10
D+K PR +AE
Sbjct: 512 DRKHPRVVAE 521


>sp|SYR_METM7|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 KKGPRTIAE 10
KK P+ IAE
Sbjct: 51 KKAPKVIAE 59


>sp|SYR_METMP|ARGININE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KKGPRTIAE 10
KK P+ IAE
Sbjct: 51 KKAPKMIAE 59


>sp|SYR_METVS|ARGININE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KKGPRTIAE 10
KK P+ IAE
Sbjct: 51 KKAPKIIAE 59


>sp|SYR_METM6|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 KKGPRTIAE 10
KK P+ IAE
Sbjct: 51 KKAPKMIAE 59


>sp|SYR_METM5|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 KKGPRTIAE 10
KK P+ IAE
Sbjct: 51 KKAPKMIAE 59


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KKGPRTIAE 10
KK P+ IAE
Sbjct: 51 KKNPKIIAE 59


>sp|GFCR1_METAC|TRANSCRIPTIONAL regulator GfcR 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DKKGPRTIA 9
DKKG TIA
Sbjct: 182 DKKGADTIA 190


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 GPRTIA 9
GPRT+A
Sbjct: 240 GPRTVA 245


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DKKGPRTIAE 10
D P+TIAE
Sbjct: 255 DNVNPKTIAE 264


>sp|SRP19_METBU|SIGNAL recognition particle 19 kDa|Methanococcoides burtonii (strain DSM

Query: 1 DKKGPRTIAE 10
DKK PRT E
Sbjct: 56 DKKYPRTWWE 65


>sp|GFCR_METMA|TRANSCRIPTIONAL regulator GfcR|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DKKGPRTIA 9
DKKG TIA
Sbjct: 182 DKKGADTIA 190


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 DKKGPRTIA 9
+KKG +TIA
Sbjct: 457 NKKGKKTIA 465


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 DKKGPRTIA 9
+KKG +TIA
Sbjct: 457 NKKGKKTIA 465


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 DKKGPRTIA 9
+KKG +TIA
Sbjct: 457 NKKGKKTIA 465


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DKKGPRTIA 9
+KKG +TIA
Sbjct: 457 NKKGKKTIA 465




161|Sequence|801|810|RTIAEMRKEE

>sp|YPV6_METTF|UNCHARACTERIZED protein ORF6|Methanothermobacter thermautotrophicus

Query: 1 RTIAEMRKE 9
R IAEMRKE
Sbjct: 2 RQIAEMRKE 10


>sp|YPZ6_METTF|UNCHARACTERIZED protein ORF6'|Methanothermobacter thermautotrophicus

Query: 1 RTIAEMRKE 9
R IAEMRKE
Sbjct: 2 RQIAEMRKE 10


>sp|MTRB_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanococcus vannielii (strain

Query: 3 IAEMRKE 9
IAEMRK+
Sbjct: 21 IAEMRKD 27


>sp|MTRB_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanococcus maripaludis (strain

Query: 3 IAEMRKE 9
IAEMRK+
Sbjct: 21 IAEMRKD 27


>sp|MTRB_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanococcus maripaludis (strain

Query: 3 IAEMRKE 9
IAEMRK+
Sbjct: 21 IAEMRKD 27


>sp|IF2P_THEAC|PROBABLE translation initiation factor IF-2|Thermoplasma acidophilum (strain

Query: 2 TIAEMRKEE 10
TI E+RKEE
Sbjct: 242 TIIEVRKEE 250


>sp|MTRB_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanococcus maripaludis (strain

Query: 3 IAEMRKE 9
IAEMRK+
Sbjct: 21 IAEMRKD 27


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 1 RTIAEMRKE 9
RT++E++KE
Sbjct: 338 RTLSELKKE 346


>sp|KADA_META3|ADENYLATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 RTIAEMRKEE 10
R IAEM KE+
Sbjct: 76 RKIAEMVKEQ 85


>sp|RS19_METAR|SMALL ribosomal subunit protein uS19|Methanocella arvoryzae (strain DSM

Query: 2 TIAEMRK 8
TIAEM+K
Sbjct: 25 TIAEMKK 31


>sp|PANB_PYRFU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RTIAEMRKE 9
R I+E RKE
Sbjct: 241 RAISEFRKE 249


>sp|PYRB_METS5|ASPARTATE carbamoyltransferase catalytic subunit|Metallosphaera sedula

Query: 1 RTIAEMRKE 9
RT+ MRKE
Sbjct: 243 RTVERMRKE 251




162|Sequence|806|815|MRKEEMAKEM

>sp|PURA_THEAC|ADENYLOSUCCINATE synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RKEEMAKEM 10
++EEMAKE+
Sbjct: 187 KREEMAKEI 195


>sp|PURA_THEGJ|ADENYLOSUCCINATE synthetase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 MRKEEMAKEM 10
MRK ++AKE+
Sbjct: 140 MRKAKLAKEV 149


>sp|GGGPS_SULTO|GERANYLGERANYLGLYCERYL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MRKEEMAKEM 10
+R EE+AKE+
Sbjct: 202 IRNEEIAKEL 211


>sp|EF1A_PYRAR|ELONGATION factor 1-alpha|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 EEMAKEM 10
EEMAK+M
Sbjct: 53 EEMAKKM 59


>sp|EF1A_PYRCJ|ELONGATION factor 1-alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 EEMAKEM 10
EEMAK+M
Sbjct: 53 EEMAKKM 59


>sp|EF1A_PYRIL|ELONGATION factor 1-alpha|Pyrobaculum islandicum (strain DSM 4184

Query: 4 EEMAKEM 10
EEMAK+M
Sbjct: 53 EEMAKKM 59




163|Sequence|811|820|MAKEMDPEKL

>sp|Y735_METS5|UPF0284 protein Msed_0735|Metallosphaera sedula (strain ATCC 51363

Query: 3 KEMDPEKL 10
KE+ PEKL
Sbjct: 244 KELSPEKL 251


>sp|RL18_PYRFU|LARGE ribosomal subunit protein uL18|Pyrococcus furiosus (strain ATCC

Query: 1 MAKEMDPEKL 10
+ K +DPEKL
Sbjct: 172 LVKGLDPEKL 181


>sp|PYRI_METAR|ASPARTATE carbamoyltransferase regulatory chain|Methanocella arvoryzae

Query: 3 KEMDPEKL 10
+E+DPE+L
Sbjct: 65 RELDPEEL 72


>sp|SECF_PYRFU|PROTEIN-EXPORT membrane protein SecF|Pyrococcus furiosus (strain ATCC 43587

Query: 4 EMDPEKL 10
EMDP+K+
Sbjct: 17 EMDPKKM 23


>sp|HDRB2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 MAKEMDPEKL 10
+ KE+ PEKL
Sbjct: 127 LYKELGPEKL 136


>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MAKEMDPEKL 10
M ++DPEKL
Sbjct: 707 MRYQVDPEKL 716


>sp|RL18_PYRHO|LARGE ribosomal subunit protein uL18|Pyrococcus horikoshii (strain ATCC

Query: 1 MAKEMDPEKL 10
+ K +DPEKL
Sbjct: 172 LEKGLDPEKL 181


>sp|RL18_PYRAB|LARGE ribosomal subunit protein uL18|Pyrococcus abyssi (strain GE5 /

Query: 1 MAKEMDPEKL 10
+ K +DPEKL
Sbjct: 172 LEKGLDPEKL 181


>sp|ARGB_METMJ|ACETYLGLUTAMATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 MAKEMDPEKL 10
+A++MDP+++
Sbjct: 127 IARKMDPQRV 136


>sp|RPO1C_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus celer

Query: 4 EMDPEKL 10
E+DPE+L
Sbjct: 162 EIDPERL 168


>sp|RPO1C_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus kodakarensis (strain ATCC

Query: 4 EMDPEKL 10
E+DPE+L
Sbjct: 162 EIDPERL 168


>sp|RPO1C_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus furiosus (strain ATCC 43587

Query: 4 EMDPEKL 10
E+DPE+L
Sbjct: 164 EIDPERL 170


>sp|RPO1C_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus gammatolerans (strain DSM

Query: 4 EMDPEKL 10
E+DPE+L
Sbjct: 162 EIDPERL 168


>sp|RPO1C_THEON|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus onnurineus (strain NA1)

Query: 4 EMDPEKL 10
E+DPE+L
Sbjct: 162 EIDPERL 168


>sp|RPO1C_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus abyssi (strain GE5 /

Query: 4 EMDPEKL 10
E+DPE+L
Sbjct: 164 EIDPERL 170


>sp|PYRH_METMA|URIDYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MAKEMDPEKL 10
+AK +DP++
Sbjct: 12 LAKNLDPDRF 21


>sp|PIMT_STAMF|PROTEIN-L-ISOASPARTATE O-methyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 MAKEMDPE 8
M +E+DPE
Sbjct: 71 MTEELDPE 78


>sp|PYRH_METBF|URIDYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 MAKEMDPEKL 10
+AK +DP++
Sbjct: 12 LAKNLDPDRF 21


>sp|TSR3_THEAC|16S rRNA aminocarboxypropyltransferase|Thermoplasma acidophilum (strain

Query: 3 KEMDPEKL 10
+E DPEK+
Sbjct: 148 READPEKI 155


>sp|RPO1C_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus horikoshii (strain ATCC

Query: 4 EMDPEKL 10
E+DPE+L
Sbjct: 164 EVDPERL 170


>sp|FTSZ2_METJA|CELL division protein FtsZ 2|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MAKEMDPE 8
+ KE+DPE
Sbjct: 309 ITKELDPE 316


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 MAKEMDPE 8
+AKE++PE
Sbjct: 327 LAKEVEPE 334


>sp|PURP_METBU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcoides burtonii (strain DSM

Query: 1 MAKEMDPEKL 10
M K +DPEK+
Sbjct: 138 MPKIVDPEKI 147


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 MAKEMDPEKL 10
++KE DPE L
Sbjct: 279 ISKEYDPEIL 288




164|Sequence|816|825|DPEKLKILEW

>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DPEKLKIL 8
DPE+LKIL
Sbjct: 400 DPERLKIL 407


>sp|GLNA_HALSA|GLUTAMINE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DPEKLKILEW 10
DPE +L W
Sbjct: 82 DPETFAVLPW 91


>sp|COFH1_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina acetivorans (strain

Query: 2 PEKLKILEW 10
P KLK EW
Sbjct: 184 PSKLKTAEW 192


>sp|RIBA_PICTO|GTP cyclohydrolase-2|Picrophilus torridus (strain ATCC 700027

Query: 1 DPEKLKILE 9
+PEKLK LE
Sbjct: 149 NPEKLKYLE 157


>sp|DAPF_META3|DIAMINOPIMELATE epimerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DPEKLKILEW 10
+P+++KI+ W
Sbjct: 220 NPQEIKIITW 229


>sp|RL22_PYRHO|LARGE ribosomal subunit protein uL22|Pyrococcus horikoshii (strain ATCC

Query: 1 DPEKLKIL 8
DP+KLKI+
Sbjct: 108 DPDKLKII 115


>sp|RL22_PYRFU|LARGE ribosomal subunit protein uL22|Pyrococcus furiosus (strain ATCC

Query: 1 DPEKLKIL 8
DP+KLKI+
Sbjct: 108 DPDKLKII 115


>sp|Y1037_META3|UPF0179 protein Maeo_1037|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PEKLKILE 9
PEK KI+E
Sbjct: 116 PEKYKIME 123


>sp|COFH_METM7|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C7 /

Query: 2 PEKLKILEW 10
P KLK EW
Sbjct: 186 PTKLKTSEW 194


>sp|COFH1_METMP|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanococcus maripaludis (strain DSM

Query: 2 PEKLKILEW 10
P KLK EW
Sbjct: 186 PTKLKTSEW 194


>sp|DCUP_THEAC|UROPORPHYRINOGEN decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DPEKLKIL 8
DPEKLK L
Sbjct: 317 DPEKLKRL 324


>sp|COFH_METM6|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C6 /

Query: 2 PEKLKILEW 10
P KLK EW
Sbjct: 186 PTKLKTSEW 194


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DPEKLKILEW 10
DPE + +L+W
Sbjct: 784 DPESVHMLDW 793


>sp|COFH_METM5|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C5 /

Query: 2 PEKLKILEW 10
P KLK EW
Sbjct: 186 PTKLKTSEW 194


>sp|COBS_PICTO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 DPEKLKIL 8
DPEK KI+
Sbjct: 85 DPEKKKII 92


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 2 PEKLKILEW 10
PEK K+++W
Sbjct: 184 PEKTKLIDW 192


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DPEKLKILEW 10
DP +IL W
Sbjct: 77 DPSTFRILPW 86


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 2 PEKLKILEW 10
PEK K+++W
Sbjct: 184 PEKTKLIDW 192


>sp|COFH1_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina barkeri (strain Fusaro

Query: 2 PEKLKILEW 10
P KL+ EW
Sbjct: 184 PSKLRTAEW 192


>sp|DEOC_THEAC|DEOXYRIBOSE-PHOSPHATE aldolase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DPEKLKI 7
DPEKL+I
Sbjct: 223 DPEKLRI 229


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DPEKLKILEW 10
DPEK + L W
Sbjct: 1334 DPEKAQRLSW 1343


>sp|RL22_PYRAB|LARGE ribosomal subunit protein uL22|Pyrococcus abyssi (strain GE5 /

Query: 1 DPEKLKIL 8
DP+KL+I+
Sbjct: 108 DPDKLRII 115


>sp|COFH_ARCFU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 PEKLKILEW 10
P KLK EW
Sbjct: 173 PRKLKTAEW 181


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 DPEKLK 6
DPEK+K
Sbjct: 28 DPEKMK 33


>sp|HIS82_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EKLKILEW 10
EKLK +EW
Sbjct: 271 EKLKEIEW 278


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 2 PEKLKILE 9
PE+L++LE
Sbjct: 166 PERLQVLE 173


>sp|HIS5_ARCFU|IMIDAZOLE glycerol phosphate synthase subunit|Archaeoglobus fulgidus

Query: 1 DPEKLK 6
DPEK+K
Sbjct: 31 DPEKIK 36


>sp|GLYA_THEAC|SERINE hydroxymethyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 DPEKLK 6
DPEK+K
Sbjct: 392 DPEKIK 397


>sp|SYR_METHJ|ARGININE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PEKLKILEW 10
PEK + +W
Sbjct: 422 PEKSTVFDW 430


>sp|SYR_METB6|ARGININE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 PEKLKILEW 10
PEK + +W
Sbjct: 425 PEKSTVFDW 433


>sp|ASPD_METKA|L-ASPARTATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 PEKLKILE 9
PEKLK +E
Sbjct: 41 PEKLKRIE 48


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 PEKLKILEW 10
PEK + +W
Sbjct: 425 PEKSTVFDW 433


>sp|COFH_METKA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanopyrus kandleri (strain AV19 /

Query: 2 PEKLKILEW 10
P+KL+ EW
Sbjct: 194 PDKLEADEW 202


>sp|SYR_METBU|ARGININE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 PEKLKILEW 10
PEK + +W
Sbjct: 425 PEKSTVFDW 433


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DPEKLKILE 9
D E+LKI+E
Sbjct: 289 DEERLKIME 297




165|Sequence|821|830|KILEWIEGKE

>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 3 LEWIEGKE 10
WIEGKE
Sbjct: 242 FNWIEGKE 249


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ILEWIEG 8
IL+WIEG
Sbjct: 255 ILQWIEG 261


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KILEWIEGKE 10
+I EWIEG E
Sbjct: 198 EIREWIEGSE 207


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KILEWIEGK 9
+ILE+I GK
Sbjct: 455 RILEYIRGK 463


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ILEWIEGK 9
+LE+IEGK
Sbjct: 441 LLEYIEGK 448


>sp|CCA_PYRHO|CCA-ADDING enzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 WIEGKE 10
WIEGKE
Sbjct: 380 WIEGKE 385


>sp|CCA_PYRAB|CCA-ADDING enzyme|Pyrococcus abyssi (strain GE5 /

Query: 5 WIEGKE 10
WIEGKE
Sbjct: 379 WIEGKE 384


>sp|VHCD_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Archaeoglobus profundus (strain

Query: 3 LEWIEGKE 10
LEWI G E
Sbjct: 105 LEWISGSE 112


>sp|RL18_PYRIL|LARGE ribosomal subunit protein uL18|Pyrobaculum islandicum (strain DSM

Query: 1 KILEWIEGK 9
KI+E+ EGK
Sbjct: 190 KIIEYYEGK 198


>sp|PYRB_METVS|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus vannielii

Query: 1 KILEWIEGK 9
++LE+I+GK
Sbjct: 194 EVLEYIDGK 202


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 KILEWIEGK 9
++LE+I+GK
Sbjct: 453 RLLEYIKGK 461


>sp|MTNA_AERPE|PUTATIVE methylthioribose-1-phosphate isomerase|Aeropyrum pernix (strain

Query: 5 WIEGKE 10
W+EGK+
Sbjct: 199 WMEGKD 204


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 EWIEGK 9
EWIEG+
Sbjct: 224 EWIEGE 229


>sp|PGMI_PYRAE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Pyrobaculum aerophilum

Query: 5 WIEGKE 10
WIEG E
Sbjct: 221 WIEGSE 226


>sp|PGMI_PYRCJ|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Pyrobaculum calidifontis

Query: 5 WIEGKE 10
WIEG E
Sbjct: 218 WIEGSE 223


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 EWIEGK 9
EW+EG+
Sbjct: 242 EWVEGE 247


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 EWIEG 8
EWIEG
Sbjct: 225 EWIEG 229


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 3 LEWIEGKE 10
WIEG E
Sbjct: 242 FNWIEGPE 249


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 3 LEWIEGKE 10
WIEG E
Sbjct: 242 FNWIEGPE 249


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 EWIEGK 9
EWIEG+
Sbjct: 225 EWIEGE 230




166|Sequence|826|835|IEGKERNIRA

>sp|NADA_HALMA|QUINOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IEGKERNI 8
+EG+ERN+
Sbjct: 346 VEGRERNV 353


>sp|NADA_HALSA|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IEGKERNI 8
+EG+ERN+
Sbjct: 346 VEGRERNV 353


>sp|NADA_HALS3|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 IEGKERNI 8
+EG+ERN+
Sbjct: 346 VEGRERNV 353


>sp|RS3_NANEQ|SMALL ribosomal subunit protein uS3|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 GKERNIRA 10
G ERNIRA
Sbjct: 101 GIERNIRA 108


>sp|Y1032_METJA|UNCHARACTERIZED protein MJ1032|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IEGKERNIRA 10
I G+E NI+A
Sbjct: 30 ILGREENIKA 39


>sp|ARGC_METBF|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IEGKERNI 8
+EGK RNI
Sbjct: 215 LEGKLRNI 222


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 1 IEGKERN 7
++GKERN
Sbjct: 893 VDGKERN 899


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 1 IEGKERNI 8
+EGKER++
Sbjct: 485 LEGKERDV 492




167|Sequence|831|840|RNIRALLSTM

***** No hits found ******


168|Sequence|836|845|LLSTMHTVLW

>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLSTMHTVLW 10
L MH VLW
Sbjct: 603 FLPYMHEVLW 612


>sp|TRUA_METPE|TRNA pseudouridine synthase A|Methanosphaerula palustris (strain ATCC

Query: 4 TMHTVLW 10
T HT LW
Sbjct: 169 TAHTYLW 175


>sp|TRMY_ARCFU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Archaeoglobus fulgidus

Query: 2 LSTMHTVL 9
L+TMHT L
Sbjct: 19 LATMHTPL 26


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LSTMHTVLW 10
+ T HTV W
Sbjct: 287 IDTPHTVAW 295


>sp|SODF_AERPE|SUPEROXIDE dismutase [Mn/Fe]|Aeropyrum pernix (strain ATCC 700893

Query: 5 MHTVLW 10
MHT+ W
Sbjct: 78 MHTIFW 83




169|Sequence|841|850|HTVLWAGETK

>sp|DAPB_METBU|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcoides burtonii (strain DSM 6242

Query: 1 HTVLWAGE 8
HTVL+AG+
Sbjct: 213 HTVLFAGD 220


>sp|GGGPS_METTH|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 2 TVLWAGETK 10
TV W G+TK
Sbjct: 135 TVGWVGDTK 143


>sp|GGGPS_METTM|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 2 TVLWAGETK 10
TV W G+TK
Sbjct: 135 TVGWVGDTK 143


>sp|NADE_THEAC|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 LWAGET 9
LWAG+T
Sbjct: 183 LWAGQT 188


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 4 LWAGET 9
+WAGET
Sbjct: 888 VWAGET 893


>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 HTVLWAGETK 10
H +LW ET+
Sbjct: 167 HRILWPIETR 176


>sp|NADE_METMA|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LWAGET 9
LWAG+T
Sbjct: 189 LWAGQT 194


>sp|TRUD_SACS2|PROBABLE tRNA pseudouridine synthase D|Saccharolobus solfataricus (strain

Query: 5 WAGETK 10
W GETK
Sbjct: 47 WKGETK 52


>sp|DAPB_METJA|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HTVLWAGE 8
HTV++AG+
Sbjct: 219 HTVIFAGD 226


>sp|DAPB_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 HTVLWAGE 8
HTV++AG+
Sbjct: 220 HTVIFAGD 227


>sp|CAPPA_SACS2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HTVLWAGETK 10
H V+W E K
Sbjct: 46 HEVMWDAEGK 55


>sp|CAPPA_SACI7|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 HTVLWAGETK 10
H V+W E K
Sbjct: 46 HEVMWDAEGK 55


>sp|CAPPA_SACI6|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 HTVLWAGETK 10
H V+W E K
Sbjct: 46 HEVMWDAEGK 55


>sp|CAPPA_SACI4|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 HTVLWAGETK 10
H V+W E K
Sbjct: 46 HEVMWDAEGK 55


>sp|CAPPA_SACI3|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 HTVLWAGETK 10
H V+W E K
Sbjct: 46 HEVMWDAEGK 55


>sp|CAPPA_SACI2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 HTVLWAGETK 10
H V+W E K
Sbjct: 46 HEVMWDAEGK 55


>sp|CAPPA_SACI1|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 HTVLWAGETK 10
H V+W E K
Sbjct: 46 HEVMWDAEGK 55


>sp|CAPPA_METS5|PHOSPHOENOLPYRUVATE carboxylase|Metallosphaera sedula (strain ATCC 51363

Query: 1 HTVLWAGETK 10
H V+W E K
Sbjct: 46 HEVMWDAEGK 55


>sp|THI4_HALMA|THIAMINE thiazole synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HTVLWAGETK 10
H +W GE++
Sbjct: 230 HDSMWVGESE 239


>sp|LEU1_PYRAE|PROBABLE 2-isopropylmalate synthase|Pyrobaculum aerophilum (strain ATCC

Query: 1 HTVLWA 6
H+V+WA
Sbjct: 327 HSVIWA 332




170|Sequence|846|855|AGETKWKPVG

>sp|IF2G_HALMA|TRANSLATION initiation factor 2 subunit|Haloarcula marismortui (strain ATCC

Query: 1 AGETKWKPV 9
G+T+W+PV
Sbjct: 261 GGKTEWQPV 269


>sp|IF2G_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 2 GETKWKPV 9
G+T+W+PV
Sbjct: 263 GKTEWRPV 270


>sp|IF2G_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 2 GETKWKPV 9
G+T+W+PV
Sbjct: 263 GKTEWRPV 270


>sp|Y1286_METJA|UNCHARACTERIZED protein MJ1286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KWKPV 9
KWKPV
Sbjct: 330 KWKPV 334


>sp|RPO3_METKA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanopyrus kandleri (strain AV19 /

Query: 5 KWKPV 9
KWKPV
Sbjct: 157 KWKPV 161


>sp|SYS_DESA1|SERINE--TRNA ligase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 6 WKPVG 10
WKPVG
Sbjct: 158 WKPVG 162


>sp|IF2G_HALLT|TRANSLATION initiation factor 2 subunit|Halorubrum lacusprofundi (strain ATCC

Query: 2 GETKWKPV 9
G+T+W+P+
Sbjct: 262 GQTEWRPL 269


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 6 WKPVG 10
WKPVG
Sbjct: 159 WKPVG 163


>sp|CBIT_METMA|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 AGETKWKP 8
AGET +KP
Sbjct: 164 AGETMFKP 171


>sp|SYS_SULTO|SERINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 6 WKPVG 10
WKPVG
Sbjct: 156 WKPVG 160


>sp|SYS_SULAC|SERINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 6 WKPVG 10
WKPVG
Sbjct: 156 WKPVG 160


>sp|SYS_SACS2|SERINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 KWKPVG 10
KWKP G
Sbjct: 155 KWKPKG 160


>sp|SYS_SACI6|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 KWKPVG 10
KWKP G
Sbjct: 155 KWKPKG 160


>sp|SYS_SACI3|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 5 KWKPVG 10
KWKP G
Sbjct: 155 KWKPKG 160


>sp|SYS_SACI2|SERINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 KWKPVG 10
KWKP G
Sbjct: 155 KWKPKG 160


>sp|SYS_SACI1|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 KWKPVG 10
KWKP G
Sbjct: 155 KWKPKG 160


>sp|SYS_SACI7|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 KWKPVG 10
KWKP G
Sbjct: 155 KWKPKG 160


>sp|SYS_SACI4|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 KWKPVG 10
KWKP G
Sbjct: 155 KWKPKG 160


>sp|CBIT_METAC|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 AGETKWKP 8
AGET +KP
Sbjct: 164 AGETMFKP 171


>sp|Y725_METJA|UNCHARACTERIZED protein MJ0725|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AGETKWKPVG 10
G+ WKPV
Sbjct: 39 VGDKNWKPVA 48


>sp|IF2G_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 GETKWKPV 9
G T+W+PV
Sbjct: 264 GRTEWEPV 271


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 GETKWKPV 9
G TKW P+
Sbjct: 294 GSTKWIPI 301


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 1 AGETKWKPVG 10
AG +WKP G
Sbjct: 343 AGAYQWKPKG 352


>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 1 AGETKWKPVG 10
AG +WKP G
Sbjct: 338 AGAYQWKPKG 347


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 ETKWKPV 9
E+ W+PV
Sbjct: 196 ESSWRPV 202


>sp|GATA_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Natronomonas pharaonis (strain ATCC

Query: 1 AGETKWKPVG 10
AGET PVG
Sbjct: 393 AGETADGPVG 402


>sp|Y331_METJA|UNCHARACTERIZED protein MJ0331|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ETKWKPVG 10
E KWKP+
Sbjct: 38 ELKWKPLS 45


>sp|SYS_STAMF|SERINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 6 WKPVG 10
WKPVG
Sbjct: 158 WKPVG 162


>sp|SYT_METMP|THREONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 AGETKWKPVG 10
AG +W P G
Sbjct: 218 AGHFRWYPKG 227


>sp|SYFB_THEPD|PHENYLALANINE--TRNA ligase beta subunit|Thermofilum pendens (strain DSM 2475

Query: 3 ETKWKPVG 10
ET+ KP+G
Sbjct: 155 ETRMKPLG 162


>sp|GPI_THEKO|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GETKWKPVG 10
GE +W P+G
Sbjct: 115 GEAEWIPMG 123


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 AGETKWKPVG 10
AG +W P G
Sbjct: 218 AGHFRWYPKG 227


>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 3 ETKWKPV 9
E+ W+PV
Sbjct: 199 ESSWRPV 205


>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 4 TKWKPV 9
T+WKPV
Sbjct: 656 TEWKPV 661


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 2 GETKWKPV 9
G T+W P+
Sbjct: 282 GSTRWIPI 289


>sp|SYT_META3|THREONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AGETKWKPVG 10
AG +W P G
Sbjct: 226 AGHFRWYPKG 235




171|Sequence|851|860|WKPVGMADLV

>sp|SYS_SULAC|SERINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WKPVGMADLV 10
WKPVG AD++
Sbjct: 156 WKPVGHADML 165


>sp|SYS_SULTO|SERINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WKPVGMADLV 10
WKPVG AD++
Sbjct: 156 WKPVGHADML 165


>sp|SYS_DESA1|SERINE--TRNA ligase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 WKPVGMADLV 10
WKPVG AD++
Sbjct: 158 WKPVGHADML 167


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 WKPVGMADLV 10
WKPVG AD++
Sbjct: 159 WKPVGHADML 168


>sp|SYS_STAMF|SERINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 WKPVGMADLV 10
WKPVG AD++
Sbjct: 158 WKPVGHADML 167


>sp|DHQS_METTP|3-DEHYDROQUINATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 KPVGMADLV 10
KPVGM D V
Sbjct: 195 KPVGMGDRV 203


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WKPVGMADLV 10
W+P G AD++
Sbjct: 159 WRPRGHADMM 168


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 WKPVGMADLV 10
++PV +AD+V
Sbjct: 14 YRPVSLADIV 23


>sp|GLYA_NATPD|SERINE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PVGMADLV 10
PVG+AD V
Sbjct: 215 PVGVADFV 222


>sp|GLYA_HALWD|SERINE hydroxymethyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PVGMADLV 10
PVG+AD V
Sbjct: 215 PVGVADFV 222


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 3 PVGMADLV 10
PVG+AD V
Sbjct: 215 PVGVADFV 222


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 3 PVGMADLV 10
PVG+AD V
Sbjct: 215 PVGVADFV 222


>sp|GLYA_HALMA|SERINE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PVGMADLV 10
PVG+AD V
Sbjct: 215 PVGVADFV 222


>sp|GLYA_HALLT|SERINE hydroxymethyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 3 PVGMADLV 10
PVG+AD V
Sbjct: 215 PVGVADFV 222


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WKPVGMADLV 10
WK +G DLV
Sbjct: 542 WKEIGPVDLV 551


>sp|SYS_IGNH4|SERINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KPVGMADLV 10
KPVG AD++
Sbjct: 160 KPVGHADML 168


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WKPVGMADLV 10
WK +G DLV
Sbjct: 482 WKELGPVDLV 491


>sp|MRE11_METTH|DNA double-strand break repair protein|Methanothermobacter

Query: 1 WKPVGMADL 9
+KPV +AD+
Sbjct: 339 FKPVDLADM 347


>sp|RS4E_SACS2|SMALL ribosomal subunit protein eS4|Saccharolobus solfataricus (strain

Query: 3 PVGMADLV 10
PVG+ D+V
Sbjct: 78 PVGLMDIV 85


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 WKPVGMADLV 10
WK +G DLV
Sbjct: 545 WKELGPVDLV 554


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 WKPVGMADLV 10
WK +G DLV
Sbjct: 545 WKELGPVDLV 554


>sp|ECFA_METMJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanoculleus marisnigri

Query: 3 PVGMADLV 10
P G+ADLV
Sbjct: 170 PQGVADLV 177


>sp|RS4E_SACI7|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 3 PVGMADLV 10
PVG+ D+V
Sbjct: 78 PVGLMDIV 85


>sp|RS4E_SACI6|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 3 PVGMADLV 10
PVG+ D+V
Sbjct: 78 PVGLMDIV 85


>sp|RS4E_SACI4|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 3 PVGMADLV 10
PVG+ D+V
Sbjct: 78 PVGLMDIV 85


>sp|RS4E_SACI3|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 3 PVGMADLV 10
PVG+ D+V
Sbjct: 78 PVGLMDIV 85


>sp|RS4E_SACI2|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 3 PVGMADLV 10
PVG+ D+V
Sbjct: 78 PVGLMDIV 85


>sp|RS4E_SACI1|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 3 PVGMADLV 10
PVG+ D+V
Sbjct: 78 PVGLMDIV 85


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 1 WKPVGMA 7
W P GMA
Sbjct: 113 WNPDGMA 119


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 1 WKPVGMA 7
W P GMA
Sbjct: 103 WNPDGMA 109


>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 WKPVGMA 7
W P GMA
Sbjct: 103 WNPDGMA 109


>sp|SYS_THESM|SERINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 WKPVGMADLV 10
WKP ADL+
Sbjct: 157 WKPELHADLL 166


>sp|GLMM_THEON|PROBABLE phosphoglucosamine mutase|Thermococcus onnurineus (strain NA1)

Query: 1 WKPVGMA 7
W+P GMA
Sbjct: 108 WQPNGMA 114


>sp|RPIA_KORCO|RIBOSE-5-PHOSPHATE isomerase A|Korarchaeum cryptofilum (strain OPF8)

Query: 4 VGMADLV 10
VG+ADLV
Sbjct: 204 VGLADLV 210


>sp|DHQS_METB6|3-DEHYDROQUINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 3 PVGMADLV 10
PVGM D V
Sbjct: 161 PVGMGDRV 168


>sp|DHQS_METMJ|3-DEHYDROQUINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PVGMADLV 10
PVGM D V
Sbjct: 161 PVGMGDRV 168


>sp|HISX_PYRAE|HISTIDINOL dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KPVGMADLV 10
KP+G+A+ V
Sbjct: 334 KPIGIAEAV 342


>sp|SYP_CALMQ|PROLINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 WKPVGMA 7
W+P G+A
Sbjct: 42 WRPYGVA 48


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 WKPVGMADL 9
WK +GM L
Sbjct: 498 WKQLGMESL 506




172|Sequence|856|865|MADLVTPEQV

>sp|PRIL_SULTO|DNA primase large subunit PriL|Sulfurisphaera tokodaii (strain DSM

Query: 1 MADLVTPEQV 10
++D+V PEQ+
Sbjct: 198 VSDVVIPEQI 207


>sp|FEN_METS3|FLAP endonuclease 1|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 MADLVTPEQV 10
+ D++ PEQ+
Sbjct: 5 LKDIIQPEQI 14


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 MADLVTPEQV 10
+ ++VTPE+V
Sbjct: 596 LGNVVTPEEV 605


>sp|IF2G_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 DLVTPEQ 9
DLVTPE+
Sbjct: 148 DLVTPEE 154


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 MADLVTPEQV 10
+AD+ TPE++
Sbjct: 616 IADVYTPEEM 625


>sp|PGP_ARCFU|PHOSPHOGLYCOLATE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ADLVTP 7
ADLVTP
Sbjct: 200 ADLVTP 205


>sp|HIS8_HALMA|HISTIDINOL-PHOSPHATE aminotransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 MADL--VTPEQV 10
+AD+ VTPEQV
Sbjct: 74 LADMWDVTPEQV 85


>sp|APGM1_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ADLVTPE 8
AD++TPE
Sbjct: 261 ADVITPE 267




173|Sequence|861|870|TPEQVKKVYR

>sp|DNAJ_METTE|CHAPERONE protein DnaJ|Methanosarcina thermophila

Query: 1 TPEQVKKVYR 10
TPE +KK YR
Sbjct: 18 TPEDIKKSYR 27


>sp|SUCC_PYRCJ|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum calidifontis (strain

Query: 1 TPEQVKKVY 9
TPE++K+VY
Sbjct: 132 TPEKIKRVY 140


>sp|SUCC_PYRIL|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum islandicum (strain

Query: 1 TPEQVKKVY 9
+PE++KKVY
Sbjct: 132 SPEKIKKVY 140


>sp|TRPB_PYRIL|TRYPTOPHAN synthase beta chain|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PEQVKKVYR 10
PE+V++VYR
Sbjct: 54 PEEVREVYR 62


>sp|RL22_PYRAR|LARGE ribosomal subunit protein uL22|Pyrobaculum arsenaticum (strain

Query: 1 TPEQVKKVY 9
TPEQ+ K Y
Sbjct: 27 TPEQIAKAY 35


>sp|RL22_PYRCJ|LARGE ribosomal subunit protein uL22|Pyrobaculum calidifontis (strain

Query: 1 TPEQVKKVY 9
TPEQ+ K Y
Sbjct: 26 TPEQIAKAY 34


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 2 PEQVKKVY 9
PE+VKK Y
Sbjct: 532 PEEVKKSY 539


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TPEQVKKVYR 10
TPE VKKV+
Sbjct: 723 TPEFVKKVFN 732


>sp|SUCC_PYRAE|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum aerophilum (strain

Query: 1 TPEQVKKVY 9
+PE++K+VY
Sbjct: 132 SPEKIKRVY 140


>sp|TRPB_PYRAE|TRYPTOPHAN synthase beta chain|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PEQVKKVYR 10
PE+V++ YR
Sbjct: 54 PEEVREAYR 62


>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PEQVKKVYR 10
PE V+++YR
Sbjct: 70 PEDVREIYR 78


>sp|DNAG_SULTO|DNA primase DnaG|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TPEQVKKV 8
TPEQ+K++
Sbjct: 298 TPEQIKEI 305


>sp|Y1266_METJA|UNCHARACTERIZED protein MJ1266|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TPEQVKKVYR 10
TPE+ K V+R
Sbjct: 147 TPEEKKYVFR 156


>sp|HTPX2_SULTO|PROTEASE HtpX homolog 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TPEQVKKV 8
TPE+VK V
Sbjct: 136 TPEEVKAV 143


>sp|SUCC_PYRAR|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum arsenaticum (strain

Query: 2 PEQVKKVY 9
PE++K+VY
Sbjct: 133 PEKIKRVY 140


Query: 1 TPEQVKKV 8
TPE+V+K+
Sbjct: 27 TPEEVRKI 34


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 3 EQVKKVYR 10
E+VKK+YR
Sbjct: 200 ERVKKLYR 207


>sp|DHE4_SACSH|NADP-SPECIFIC glutamate dehydrogenase|Saccharolobus shibatae (strain ATCC 51178

Query: 3 EQVKKVYR 10
+QVKK+Y+
Sbjct: 16 QQVKKLYK 23


>sp|LEU1_PYRFU|2-ISOPROPYLMALATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TPEQVKKV 8
TPE+VKK+
Sbjct: 114 TPEEVKKM 121


>sp|PYRF_METTE|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina thermophila

Query: 2 PEQVKKVYR 10
PE+V+K+ R
Sbjct: 145 PERVRKIRR 153


>sp|SDO1_AERPE|RIBOSOME maturation protein SDO1 homolog|Aeropyrum pernix (strain ATCC

Query: 1 TPEQVKKVY 9
+PE+VKK +
Sbjct: 59 SPEEVKKAF 67


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 TPEQVKKV 8
TPE++KK+
Sbjct: 652 TPEELKKI 659


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EQVKKVYR 10
E+VKK+YR
Sbjct: 196 ERVKKLYR 203


>sp|DHQS_NITMS|3-DEHYDROQUINATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 TPEQVKKVY 9
TPE+V+K++
Sbjct: 132 TPEEVRKMF 140


>sp|RPIA_THEKO|RIBOSE-5-PHOSPHATE isomerase A|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TPEQVKKVYR 10
TPE VK++ R
Sbjct: 220 TPEGVKRMER 229


>sp|PSA_METKA|PROTEASOME subunit alpha|Methanopyrus kandleri (strain AV19 /

Query: 2 PEQVKKVYR 10
PE ++KVY+
Sbjct: 63 PESIEKVYQ 71


>sp|YI48_METSM|INSERTION element ISM1 uncharacterized 48.3|Methanobrevibacter smithii

Query: 2 PEQVKKVYR 10
PE++KK+Y+
Sbjct: 369 PEKIKKIYK 377


>sp|PSB_METKA|PROTEASOME subunit beta|Methanopyrus kandleri (strain AV19 /

Query: 3 EQVKKVYR 10
+QVKK++R
Sbjct: 39 KQVKKIFR 46


>sp|THSB_AERPE|THERMOSOME subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 1 TPEQVKKVY 9
+PEQ+K +Y
Sbjct: 268 SPEQIKALY 276


>sp|TRPB2_PYRFU|TRYPTOPHAN synthase beta chain 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PEQVKKVY 9
PE+V+K+Y
Sbjct: 64 PEEVRKMY 71


>sp|TRPB_PYRAR|TRYPTOPHAN synthase beta chain|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PEQVKKVYR 10
PE+V+ YR
Sbjct: 54 PEEVRDAYR 62


>sp|WECC_METM7|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 2 PEQVKKVY 9
PE KK+Y
Sbjct: 133 PETTKKIY 140


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 3 EQVKKVYR 10
++VKK+YR
Sbjct: 22 DEVKKIYR 29


>sp|ARGC_METS3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 TPEQVKKVY 9
TP++++K Y
Sbjct: 248 TPDELRKFY 256


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 PEQVKKVY 9
PE KK+Y
Sbjct: 133 PETTKKIY 140


>sp|RSMA_PYRAB|PROBABLE ribosomal RNA small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 TPEQVKKV 8
TPE+VK++
Sbjct: 251 TPEEVKEI 258


>sp|YD5A_METJA|UNCHARACTERIZED protein MJ1351.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PEQVKKVYR 10
P++V K YR
Sbjct: 151 PDEVAKFYR 159


>sp|DHE2_SACS2|GLUTAMATE dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 EQVKKVYR 10
+QVKK+Y+
Sbjct: 13 QQVKKLYK 20


>sp|CIMA_ARCFU|PUTATIVE (R)-citramalate synthase CimA|Archaeoglobus fulgidus (strain ATCC

Query: 1 TPEQVKKV 8
TPEQ+K++
Sbjct: 336 TPEQMKEI 343


>sp|THIC_SULAC|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PEQVKKVY 9
PEQ KVY
Sbjct: 390 PEQAYKVY 397


>sp|DNAJ_HALLT|CHAPERONE protein DnaJ|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 TPEQVKKVYR 10
+ E++KK YR
Sbjct: 16 SEEEIKKAYR 25


>sp|TIAS_PYRNV|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrobaculum neutrophilum

Query: 2 PEQVKKVYR 10
PE+ K +YR
Sbjct: 105 PERAKTLYR 113


>sp|Y1355_METJA|UNCHARACTERIZED protein MJ1355|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TPEQVKK 7
TPE++KK
Sbjct: 533 TPEEIKK 539


>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EQVKKVYR 10
EQ+KKV R
Sbjct: 296 EQIKKVLR 303


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EQVKKVYR 10
E+V+K+YR
Sbjct: 201 ERVRKLYR 208


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC

Query: 2 PEQVKKVYR 10
PE+V VYR
Sbjct: 77 PEEVLDVYR 85


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 TPEQVKKV 8
+PE+V+KV
Sbjct: 12 SPEEVRKV 19




174|Sequence|866|875|KKVYRKAVLV

>sp|NFI_THEAC|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma acidophilum (strain

Query: 1 KKVYRKAVLV 10
KK+YRKA L+
Sbjct: 197 KKLYRKADLL 206


>sp|RL34_METMP|LARGE ribosomal subunit protein eL34|Methanococcus maripaludis (strain

Query: 1 KKVYRKA 7
KKVYRKA
Sbjct: 12 KKVYRKA 18


>sp|RL34_METM7|LARGE ribosomal subunit protein eL34|Methanococcus maripaludis (strain

Query: 1 KKVYRKA 7
KKVYRKA
Sbjct: 12 KKVYRKA 18


>sp|RL34_METM5|LARGE ribosomal subunit protein eL34|Methanococcus maripaludis (strain

Query: 1 KKVYRKA 7
KKVYRKA
Sbjct: 12 KKVYRKA 18




175|Sequence|871|880|KAVLVVHPDK

>sp|TRPD_AERPE|ANTHRANILATE phosphoribosyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 AVLVVHPD 9
AVLVVH D
Sbjct: 221 AVLVVHGD 228


>sp|LYSY_IGNH4|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 VLVVHPD 9
VL VHPD
Sbjct: 21 VLAVHPD 27


>sp|MPTE_PYRFU|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KAVLVVH 7
KAV+VVH
Sbjct: 115 KAVMVVH 121


>sp|PURQ_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Haloquadratum walsbyi (strain DSM 16790

Query: 2 AVLVVHPDK 10
AVL+ HP++
Sbjct: 200 AVLMPHPER 208


>sp|PURQ_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Natronomonas pharaonis (strain ATCC 35678

Query: 2 AVLVVHPDK 10
AVL+ HP++
Sbjct: 197 AVLMPHPER 205


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 LVVHPD 9
+VVHPD
Sbjct: 227 VVVHPD 232


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 LVVHPD 9
++VHPD
Sbjct: 215 IIVHPD 220


>sp|NASA_HALMT|ASSIMILATORY nitrate reductase|Haloferax mediterranei (strain ATCC 33500

Query: 2 AVLVVHPD 9
AV VHPD
Sbjct: 687 AVRFVHPD 694


>sp|RL21_NANEQ|LARGE ribosomal subunit protein eL21|Nanoarchaeum equitans (strain

Query: 1 KAVLVVHP 8
K +L+VHP
Sbjct: 84 KKLLIVHP 91




176|Sequence|876|885|VHPDKATGQP

>sp|Y352_METJA|UNCHARACTERIZED protein MJ0352|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HPDKATGQ 9
+PDK TG+
Sbjct: 126 YPDKKTGK 133


>sp|RL13_METHJ|LARGE ribosomal subunit protein uL13|Methanospirillum hungatei JF-1

Query: 3 PDKATGQP 10
PD+ +GQP
Sbjct: 102 PDELSGQP 109


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VHPDKATG 8
V PD ATG
Sbjct: 313 VDPDNATG 320


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VHPDKATG 8
V PD ATG
Sbjct: 313 VDPDNATG 320


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 VHPDKATG 8
V PD ATG
Sbjct: 313 VDPDNATG 320


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 VHPDKATG 8
V PD ATG
Sbjct: 313 VDPDNATG 320


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 VHPDKATG 8
V PD ATG
Sbjct: 318 VDPDNATG 325


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VHPDKATG 8
V PD ATG
Sbjct: 313 VDPDNATG 320


>sp|ASSY_HYPBU|ARGININOSUCCINATE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 VHPDKATGQP 10
V P+KA QP
Sbjct: 202 VAPEKAPDQP 211


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 VHPDKATGQ 9
+HPD+A +
Sbjct: 851 IHPDEANNR 859


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 1 VHPDKATGQ 9
+HP K TG+
Sbjct: 694 LHPSKDTGK 702


>sp|R15PI_HALTV|RIBOSE 1,5-bisphosphate isomerase|Haloterrigena turkmenica (strain ATCC

Query: 1 VHPDKATG 8
+HPD TG
Sbjct: 239 LHPDTMTG 246




177|Sequence|881|890|ATGQPYEQYA

>sp|CDC61_AERPE|ORC1-TYPE DNA replication protein 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 ATGQPYEQY 9
+TG+ YE+Y
Sbjct: 318 STGEIYERY 326


>sp|DHQS_METAR|3-DEHYDROQUINATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 3 GQPYEQYA 10
G+ YEQ+A
Sbjct: 105 GKEYEQFA 112


>sp|COBQ_HALMA|PROBABLE cobyric acid synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ATGQPYEQYA 10
A G PYE+ A
Sbjct: 466 ADGDPYERAA 475


>sp|TRM56_METB6|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanoregula boonei (strain

Query: 2 TGQPYEQYA 10
TGQP+ + A
Sbjct: 130 TGQPHSEIA 138


>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ATGQPY 6
ATG+PY
Sbjct: 110 ATGKPY 115




178|Sequence|886|895|YEQYAKMIFM

>sp|FAU1_PYRAR|PROBABLE ribonuclease FAU-1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YEQYAKM 7
YE+YA+M
Sbjct: 410 YEKYAEM 416


>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 YEQYAKMIF 9
YE+YAK ++
Sbjct: 467 YEEYAKPLY 475




179|Sequence|891|900|KMIFMELNDA

>sp|HIS1_METS5|ATP phosphoribosyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KMIFMELND 9
KMIFM ++D
Sbjct: 214 KMIFMNVDD 222


>sp|HIS1_SULAC|ATP phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 KMIFMELNDA 10
KMIFM + D+
Sbjct: 214 KMIFMNVPDS 223


>sp|ACDE_METKA|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanopyrus

Query: 1 KMIFMELNDA 10
KM+F ND+
Sbjct: 24 KMVFRRANDS 33


>sp|HIS1_SULTO|ATP phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KMIFMELND 9
KMIFM + D
Sbjct: 214 KMIFMNVPD 222


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KMIFMELNDA 10
K IFM+ N+A
Sbjct: 653 KSIFMDRNEA 662


>sp|HIS1_SACS2|ATP phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 KMIFMELND 9
KMIFM + D
Sbjct: 219 KMIFMNVPD 227




180|Sequence|896|905|ELNDAWSEFE

>sp|NADM_SACS2|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LNDAWSEF 9
LND WSE
Sbjct: 139 LNDNWSEL 146


>sp|RL18E_PICTO|LARGE ribosomal subunit protein eL18|Picrophilus torridus (strain ATCC

Query: 1 ELNDAWSEF 9
+LNDA SEF
Sbjct: 94 KLNDAGSEF 102


>sp|Y920_THESM|UPF0200 protein TSIB_0920|Thermococcus sibiricus (strain DSM 12597

Query: 5 AWSEFE 10
+WSEFE
Sbjct: 134 SWSEFE 139


>sp|RS9_HALSA|SMALL ribosomal subunit protein uS9|Halobacterium salinarum (strain ATCC

Query: 1 ELNDAWSEFE 10
EL DA+ EF+
Sbjct: 93 ELRDAFREFD 102


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 ELNDAWSEFE 10
++N +W+EF+
Sbjct: 373 DINFSWTEFQ 382


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ELNDAWSEFE 10
EL+ +W EF+
Sbjct: 363 ELDFSWKEFQ 372


>sp|RL11_THEKO|LARGE ribosomal subunit protein uL11|Thermococcus kodakarensis (strain

Query: 1 ELNDAWSEFE 10
E+N A EFE
Sbjct: 37 EINKATKEFE 46


>sp|RL11_THEGJ|LARGE ribosomal subunit protein uL11|Thermococcus gammatolerans (strain

Query: 1 ELNDAWSEFE 10
E+N A EFE
Sbjct: 37 EINKATKEFE 46


>sp|AGLB2_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ELNDAW 6
E+N+AW
Sbjct: 463 EMNEAW 468


>sp|Y611_METJA|PUTATIVE zinc metalloprotease MJ0611|Methanocaldococcus jannaschii (strain

Query: 5 AWSEF 9
AWSEF
Sbjct: 62 AWSEF 66


>sp|PRIS_METTH|DNA primase small subunit PriS|Methanothermobacter thermautotrophicus

Query: 2 LNDAWSEF 9
L D W EF
Sbjct: 242 LEDRWGEF 249


>sp|RS9_HALMA|SMALL ribosomal subunit protein uS9|Haloarcula marismortui (strain ATCC

Query: 1 ELNDAWSEFE 10
EL DA+ EF+
Sbjct: 93 ELRDAFMEFD 102


>sp|RL11_SULTO|LARGE ribosomal subunit protein uL11|Sulfurisphaera tokodaii (strain

Query: 1 ELNDAWSEFE 10
++NDA S+F+
Sbjct: 38 KINDATSQFK 47


>sp|SYP_METJA|PROLINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NDAWSEFE 10
N AW +FE
Sbjct: 384 NRAWEKFE 391


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 1 ELNDAWS 7
+LNDAW
Sbjct: 173 DLNDAWG 179




181|Sequence|901|913|WSEFENQGQKPLY

>sp|ILVC_SULAC|KETOL-ACID reductoisomerase (NADP(+))|Sulfolobus acidocaldarius (strain ATCC

Query: 1 WSEFENQGQKPL 12
W + EN G KPL
Sbjct: 54 WKQAENDGFKPL 65


>sp|MVK_THEON|MEVALONATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 WSEFENQG 8
W+EF N+G
Sbjct: 37 WAEFNNKG 44


>sp|OFOA_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Saccharolobus solfataricus (Sulfolobus

Query: 3 EFENQGQKPL 12
E EN+G KP+
Sbjct: 537 ELENEGIKPM 546


>sp|Y202_METJA|UNCHARACTERIZED protein MJ0202|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SEFENQGQKPLY 13
+E+E++ KP+Y
Sbjct: 267 TEYEDKIDKPIY 278


>sp|TRMY_THEON|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 4 FENQGQKP 11
FE QG KP
Sbjct: 68 FEGQGMKP 75


>sp|FKBPL_METTH|LONG-TYPE peptidyl-prolyl cis-trans isomerase|Methanothermobacter

Query: 3 EFENQGQKP 11
EF+ QG KP
Sbjct: 97 EFKRQGIKP 105


>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WSEFEN 6
WS FEN
Sbjct: 517 WSSFEN 522


>sp|FKBPL_METJA|LONG-TYPE peptidyl-prolyl cis-trans isomerase|Methanocaldococcus jannaschii

Query: 2 SEFENQGQKPL 12
SEF +G KP+
Sbjct: 94 SEFTKRGIKPI 104


>sp|GFCR_METTH|TRANSCRIPTIONAL regulator GfcR|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 FENQGQKPL 12
+NQG KP+
Sbjct: 165 LKNQGAKPI 173


>sp|MOAA_METS5|PROBABLE GTP 3',8-cyclase|Metallosphaera sedula (strain ATCC 51363

Query: 3 EFENQGQKPL 12
E +NQG KP+
Sbjct: 142 EAKNQGFKPI 151


>sp|THIC2_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 ENQGQKPLY 13
+NQ + PLY
Sbjct: 196 QNQEENPLY 204


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 ENQGQKPLY 13
++ GQ PLY
Sbjct: 300 QSNGQDPLY 308


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 5 ENQGQKPLY 13
++ GQ PLY
Sbjct: 297 QSNGQDPLY 305


>sp|PSTS_METJA|PHOSPHATE-BINDING protein PstS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WSEFENQGQKPL 12
W +F + G +PL
Sbjct: 115 WKKFLSTGDQPL 126


>sp|Y3021_SACS2|UNCHARACTERIZED protein SSO3021|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WSEFENQGQK 10
W E EN G K
Sbjct: 80 WGEMENYGFK 89


>sp|GCK_SULTO|GLYCERATE 2-kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SEFENQGQKPLY 13
+ F N G KP Y
Sbjct: 279 TSFSNLGLKPPY 290


>sp|THIL_NITMS|THIAMINE-MONOPHOSPHATE kinase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 SEFENQGQKPLY 13
S+F +G KP Y
Sbjct: 66 SDFAAKGVKPQY 77


>sp|Y686_ARCFU|UNCHARACTERIZED protein AF_0686|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SEFENQGQKPLY 13
S+F +GQK +Y
Sbjct: 63 SDFGEKGQKVVY 74


>sp|SYT_THEGJ|THREONINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 SEFENQGQKPLY 13
++ + QG+KP++
Sbjct: 494 AKLQAQGKKPMF 505


>sp|ILVC_HALMA|KETOL-ACID reductoisomerase (NADP(+))|Haloarcula marismortui (strain ATCC

Query: 5 ENQGQKPLY 13
ENQ +P Y
Sbjct: 295 ENQANRPAY 303


>sp|Y1446_ARCFU|UNCHARACTERIZED protein AF_1446|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SEFENQGQKPL 12
SEFE G+K L
Sbjct: 218 SEFEVLGEKAL 228


>sp|ILVC_METBF|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina barkeri (strain Fusaro

Query: 1 WSEFENQGQK 10
W++ EN G K
Sbjct: 54 WAKAENDGLK 63


>sp|SYT_PYRAB|THREONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 SEFENQGQKPLY 13
++ N+G+KP++
Sbjct: 493 AKLMNEGKKPMF 504


>sp|RL5_METKA|LARGE ribosomal subunit protein uL5|Methanopyrus kandleri (strain AV19

Query: 5 ENQGQKPLY 13
E GQKP+Y
Sbjct: 51 ELTGQKPVY 59






THE END