1|SequenceR|10|1|SRPAAAASRM
***** No hits found ******
2|SequenceR|15|6|TAVAPSRPAA
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 AVAPSRPA 9
AVAP +PA
Sbjct: 1598 AVAPGKPA 1605
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 VAPSRPAA 10
++PS PAA
Sbjct: 525 LSPSEPAA 532
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 3 VAPSRPAA 10
++PS PAA
Sbjct: 525 LSPSEPAA 532
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 TAVAPS 6
TAVAPS
Sbjct: 173 TAVAPS 178
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 TAVAPS 6
TAVAPS
Sbjct: 42 TAVAPS 47
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 3 VAPSRPAA 10
++PS PAA
Sbjct: 525 LSPSEPAA 532
>sp|VE2_HPV38|REGULATORY protein E2|Human papillomavirus 38
Query: 1 TAVAPSRP 8
T+V+P RP
Sbjct: 222 TSVSPERP 229
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 TAVAPS 6
TAVAPS
Sbjct: 273 TAVAPS 278
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 4 APSRPAA 10
AP RPAA
Sbjct: 650 APKRPAA 656
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 4 APSRPAA 10
AP RPAA
Sbjct: 650 APKRPAA 656
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 4 APSRPAA 10
AP RPAA
Sbjct: 650 APKRPAA 656
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 4 APSRPAA 10
AP RPAA
Sbjct: 650 APKRPAA 656
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TAVAPSRPAA 10
TA+AP PAA
Sbjct: 7 TALAPVGPAA 16
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TAVAPSRPAA 10
TA+AP PAA
Sbjct: 7 TALAPVGPAA 16
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 TAVAPS 6
TAVAPS
Sbjct: 273 TAVAPS 278
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 TAVAPS 6
TAVAPS
Sbjct: 273 TAVAPS 278
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 TAVAPS 6
TAVAPS
Sbjct: 273 TAVAPS 278
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 TAVAPSR 7
TA+AP+R
Sbjct: 57 TAIAPTR 63
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 TAVAPSR 7
TA+AP+R
Sbjct: 57 TAIAPTR 63
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 TAVAPSR 7
TA+AP+R
Sbjct: 57 TAIAPTR 63
>sp|US9_VZVO|ENVELOPE protein US9|Varicella-zoster virus (strain Oka vaccine)
Query: 1 TAVAPSRPA 9
TA+ PSR A
Sbjct: 32 TAIQPSRSA 40
>sp|US9_VZVD|ENVELOPE protein US9|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 TAVAPSRPA 9
TA+ PSR A
Sbjct: 32 TAIQPSRSA 40
>sp|E1A_ADE41|EARLY E1A protein|Human adenovirus F serotype 41
Query: 1 TAVAPSRP 8
TA AP RP
Sbjct: 205 TATAPVRP 212
>sp|VP12_CTFVL|UNCHARACTERIZED protein VP12|Colorado tick fever virus (strain
Query: 1 TAVAPSRPAA 10
T VAPS P+A
Sbjct: 165 TRVAPSAPSA 174
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 AVAPSRP 8
AVAP RP
Sbjct: 893 AVAPRRP 899
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 AVAPSRP 8
AVAP RP
Sbjct: 893 AVAPRRP 899
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 AVAPSRP 8
AVAP RP
Sbjct: 893 AVAPRRP 899
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 AVAPSRP 8
AVAP RP
Sbjct: 893 AVAPRRP 899
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 AVAPSRP 8
AVAP RP
Sbjct: 893 AVAPRRP 899
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 AVAPSRP 8
AVAP RP
Sbjct: 893 AVAPRRP 899
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 AVAPSRP 8
AVAP RP
Sbjct: 893 AVAPRRP 899
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 AVAPSRP 8
AVAP RP
Sbjct: 893 AVAPRRP 899
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 AVAPSRP 8
AVAP RP
Sbjct: 893 AVAPRRP 899
>sp|IR08_HCMVA|UNCHARACTERIZED protein IRL8|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 VAPSRPA 9
V+P RPA
Sbjct: 29 VSPERPA 35
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 TAVAPS 6
TA+APS
Sbjct: 273 TAIAPS 278
3|SequenceR|20|11|FRRSETAVAP
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 1 FRRSETAV 8
RRSETA+
Sbjct: 106 LRRSETAM 113
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 FRRSETA 7
FRR+ET
Sbjct: 113 FRRAETG 119
4|SequenceR|25|16|WRAAAFRRSE
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 1 WRAAAFRRSE 10
W +AF RS+
Sbjct: 148 WIGSAFNRSD 157
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 1 WRAAAFRRSE 10
W +AF RS+
Sbjct: 148 WIGSAFNRSD 157
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 1 WRAAAFRRSE 10
W +AF RS+
Sbjct: 148 WIGSAFNRSD 157
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 1 WRAAAFRRSE 10
W +AF RS+
Sbjct: 148 WIGSAFNRSD 157
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 1 WRAAAFRRS 9
WR FR S
Sbjct: 388 WRTNVFRTS 396
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 1 WRAAAFRRS 9
WR FR S
Sbjct: 388 WRTNVFRTS 396
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 1 WRAAAFRRS 9
W+A AF R+
Sbjct: 23 WKAGAFERA 31
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WRAAAFRRS 9
WR+ +RS
Sbjct: 314 WRSMTLKRS 322
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 1 WRAAAFR 7
WR A FR
Sbjct: 303 WRRAVFR 309
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 WRAAAFRR 8
W AAA+ +
Sbjct: 2687 WNAAAYMK 2694
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 WRAAAFRR 8
W AAA+ +
Sbjct: 2687 WNAAAYMK 2694
5|SequenceR|30|21|SRWGPWRAAA
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 SRWGPWRAAA 10
S+WGP+ + A
Sbjct: 1179 SKWGPFMSPA 1188
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 2 RWGPWR 7
RW PWR
Sbjct: 1429 RWIPWR 1434
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 SRWGPWRAAA 10
S+WGP + A
Sbjct: 1193 SKWGPHMSPA 1202
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 SRWGPWRAAA 10
S+WGP + A
Sbjct: 1189 SKWGPHMSPA 1198
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 SRWGPWRAAA 10
S+WGP + A
Sbjct: 1190 SKWGPTMSPA 1199
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 SRWGPWRAAA 10
S+WGP + A
Sbjct: 1189 SKWGPTMSPA 1198
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 1 SRWGPWRAAA 10
R GPWR A
Sbjct: 801 ERLGPWRPEA 810
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 SRWGP 5
S+WGP
Sbjct: 1184 SKWGP 1188
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 SRWGP 5
S+WGP
Sbjct: 1195 SKWGP 1199
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 SRWGP 5
S+WGP
Sbjct: 1192 SKWGP 1196
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 SRWGPWRAAA 10
S + PW AAA
Sbjct: 969 SLFPPWTAAA 978
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 5 PWRAAA 10
PW AAA
Sbjct: 970 PWSAAA 975
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 5 PWRAAA 10
PW AAA
Sbjct: 970 PWSAAA 975
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 5 PWRAAA 10
PW AAA
Sbjct: 974 PWSAAA 979
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 WGPWRAA 9
W PW+A
Sbjct: 474 WPPWQAG 480
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 WGPWRAA 9
W PW+A
Sbjct: 484 WPPWQAG 490
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 WGPWRAA 9
W PW+A
Sbjct: 484 WPPWQAG 490
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 SRWGPWR 7
++W PWR
Sbjct: 1430 AQWIPWR 1436
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 SRWGPWR 7
++W PWR
Sbjct: 1430 AQWIPWR 1436
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 SRWGPWR 7
++W PWR
Sbjct: 1430 AQWIPWR 1436
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 3 WGPWR 7
W PW+
Sbjct: 970 WNPWK 974
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 WGPWR 7
W PW+
Sbjct: 970 WNPWK 974
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 WGPWR 7
W PW+
Sbjct: 970 WNPWK 974
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 WGPWR 7
W PW+
Sbjct: 968 WNPWK 972
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 WGPWR 7
W PWR
Sbjct: 1409 WIPWR 1413
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 WGPWR 7
W PWR
Sbjct: 1409 WIPWR 1413
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 3 WGPWRAAA 10
WGPW A
Sbjct: 136 WGPWATCA 143
>sp|E316_ADE03|EARLY E3 16 kDa glycoprotein|Human adenovirus B serotype 3
Query: 2 RWGPW 6
+WGP+
Sbjct: 142 KWGPY 146
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 SRWGPWR 7
+ GPWR
Sbjct: 1040 QKLGPWR 1046
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 SRWGPWR 7
+ GPWR
Sbjct: 1040 QKLGPWR 1046
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 SRWGPWR 7
+ GPWR
Sbjct: 1040 QKLGPWR 1046
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 RWGPWR 7
RW P+R
Sbjct: 29 RWRPFR 34
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 1 SRWGPWR 7
S+W WR
Sbjct: 417 SQWIKWR 423
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 1 SRWGPWR 7
++WG WR
Sbjct: 122 AQWGLWR 128
6|SequenceR|35|26|APRQLSRWGP
>sp|US25_HCMVA|UNCHARACTERIZED protein US25|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PRQLSRW 8
PR+LS+W
Sbjct: 119 PRELSKW 125
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 PRQLSRWG 9
PRQL WG
Sbjct: 437 PRQLFFWG 444
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 PRQLSRWG 9
PRQL WG
Sbjct: 437 PRQLFFWG 444
>sp|X_HBVG3|PROTEIN X|Hepatitis B virus genotype G
Query: 2 PRQLSRW 8
PRQL +W
Sbjct: 90 PRQLYKW 96
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 2 PRQLSRWG 9
PR+++ WG
Sbjct: 93 PRRVNIWG 100
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 PRQLSRW 8
PR RW
Sbjct: 375 PRSFPRW 381
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 PRQLSRWG 9
PR+++ WG
Sbjct: 93 PRRVNIWG 100
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 PRQLSRW 8
PR L+ W
Sbjct: 400 PRSLASW 406
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 PRQLSRW 8
PR L+ W
Sbjct: 400 PRSLASW 406
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 2 PRQLSRW 8
PR L+ W
Sbjct: 400 PRSLASW 406
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 PRQLSRW 8
PR L+ W
Sbjct: 400 PRSLASW 406
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 2 PRQLSRW 8
PR L+ W
Sbjct: 400 PRSLASW 406
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 PRQLSRW 8
PR L+ W
Sbjct: 400 PRSLASW 406
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 PRQLSRW 8
PR L+ W
Sbjct: 400 PRSLASW 406
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 2 PRQLSRW 8
PR L+ W
Sbjct: 400 PRSLASW 406
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 PRQLSRW 8
PR L+ W
Sbjct: 400 PRSLASW 406
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 PRQLSRWG 9
PR + WG
Sbjct: 2641 PRDVHTWG 2648
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 PRQLSRWG 9
PR + WG
Sbjct: 2641 PRDVHTWG 2648
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 2 PRQLSRWG 9
PR+L WG
Sbjct: 125 PRRLRLWG 132
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 2 PRQLSRWG 9
PR+L WG
Sbjct: 125 PRRLRLWG 132
>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain GD1)
Query: 1 APRQLSRW 8
PR L RW
Sbjct: 236 GPRSLFRW 243
>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 APRQLSRW 8
PR L RW
Sbjct: 236 GPRSLFRW 243
>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 APRQLSRW 8
PR L RW
Sbjct: 236 GPRSLFRW 243
7|SequenceR|40|31|RGSRRAPRQL
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 GSRRAPRQL 10
GSRR+PRQL
Sbjct: 1916 GSRRSPRQL 1924
>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain
Query: 1 RGSRRAPR 8
RG++RAPR
Sbjct: 24 RGTKRAPR 31
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 RGSRRAPR 8
RG R APR
Sbjct: 1028 RGGRTAPR 1035
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RGSRRAPR 8
RG R APR
Sbjct: 1028 RGGRTAPR 1035
>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GSRRAPRQ 9
G+RR PR+
Sbjct: 268 GNRRRPRK 275
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 2 GSRRAPRQL 10
G RRAPR+L
Sbjct: 74 GGRRAPRRL 82
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 3 SRRAPRQ 9
SR+ PRQ
Sbjct: 245 SRKRPRQ 251
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 RRAPRQL 10
+RAPR+L
Sbjct: 887 KRAPRRL 893
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 1 RGSRRAPR 8
R SRR PR
Sbjct: 521 RQSRRIPR 528
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RGSRRAPRQL 10
RG+ R PR++
Sbjct: 375 RGNFRGPRRI 384
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 2 GSRRAPRQL 10
G RR+PR+L
Sbjct: 67 GRRRSPREL 75
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 1 RGSRRAPR 8
RG+R APR
Sbjct: 348 RGTRVAPR 355
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 1 RGSRRAPR 8
RG+R APR
Sbjct: 348 RGTRVAPR 355
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 1 RGSRRAPRQL 10
RG+R+AP L
Sbjct: 209 RGTRQAPPPL 218
>sp|VE8E2_HPV39|PROTEIN E8^E2C|Human papillomavirus 39
Query: 3 SRRAPRQ 9
SR+ PRQ
Sbjct: 50 SRKRPRQ 56
8|SequenceR|45|36|AGGGGRGSRR
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 2 GGGGRGS 8
GGGGR S
Sbjct: 75 GGGGRPS 81
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 2 GGGGRGS 8
GGGGR S
Sbjct: 75 GGGGRPS 81
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 1 AGGGGRGSR 9
A GG GSR
Sbjct: 2 AASGGEGSR 10
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 2 GGGGRG 7
GGGG+G
Sbjct: 156 GGGGQG 161
>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29
Query: 3 GGGRGS 8
GGGRG+
Sbjct: 369 GGGRGA 374
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GGGGRGSR 9
GGG G+R
Sbjct: 466 GGGSEGTR 473
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 2 GGGGR 6
GGGGR
Sbjct: 75 GGGGR 79
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 2 GGGGR 6
GGGGR
Sbjct: 75 GGGGR 79
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 2 GGGGRG 7
GGGG G
Sbjct: 159 GGGGHG 164
>sp|K42_HHV8P|PROTEIN K4.2|Human herpesvirus 8 type P
Query: 2 GGGGRG 7
GGGGRG
Sbjct: 118 GGGGRG 123
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 2 GGGGRGSRR 10
GG GR S++
Sbjct: 341 GGIGRASKK 349
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 GGGGRGSRR 10
GG GR S++
Sbjct: 341 GGIGRASKK 349
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 2 GGGGRGSRR 10
GG GR S++
Sbjct: 341 GGIGRASKK 349
>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22
Query: 4 GGRGSRR 10
GGR +RR
Sbjct: 276 GGRATRR 282
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 GGGGRGSR 9
GG GSR
Sbjct: 236 GGANEGSR 243
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GGGGRGSR 9
GG GSR
Sbjct: 229 GGANEGSR 236
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GGGGRGSR 9
GG GSR
Sbjct: 229 GGANEGSR 236
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 2 GGGGRGSR 9
GG GSR
Sbjct: 236 GGANEGSR 243
>sp|VE7_HPV24|PROTEIN E7|Human papillomavirus 24
Query: 3 GGGRGSR 9
GGG G+R
Sbjct: 50 GGGCGTR 56
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 GGGGRGS 8
GGG RG+
Sbjct: 2488 GGGRRGT 2494
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 GGGGRGS 8
GGG RG+
Sbjct: 2489 GGGRRGT 2495
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 GGGGRGS 8
GGG RG+
Sbjct: 2489 GGGRRGT 2495
9|SequenceR|50|41|YPGPAAGGGG
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 2 PGPAAGGG 9
PGPAA GG
Sbjct: 142 PGPAAQGG 149
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 1 YPGPAAGG 8
YPGP GG
Sbjct: 112 YPGPLGGG 119
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 YPGPAAGG 8
YPGP GG
Sbjct: 112 YPGPFGGG 119
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 YPGPAAGG 8
YPGP GG
Sbjct: 112 YPGPFGGG 119
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 YPGPAAGG 8
YPGP GG
Sbjct: 112 YPGPFGGG 119
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 2 PGPAAGG 8
PGP+ GG
Sbjct: 70 PGPSGGG 76
>sp|BARF1_EBVG|SECRETED protein BARF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PGPAAGGGG 10
P P A GG
Sbjct: 166 PAPTAANGG 174
>sp|BARF1_EBVB9|SECRETED protein BARF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PGPAAGGGG 10
P P A GG
Sbjct: 166 PAPTAANGG 174
>sp|BARF1_EBVA8|SECRETED protein BARF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PGPAAGGGG 10
P P A GG
Sbjct: 166 PAPTAANGG 174
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 YPGPAAGGG 9
+ GP GGG
Sbjct: 848 FLGPMEGGG 856
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 YPGPAAGGG 9
+ GP GGG
Sbjct: 847 FLGPMEGGG 855
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 PGPAAGG 8
P P AGG
Sbjct: 5 PSPRAGG 11
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 YPGPAAGGG 9
+ GP GGG
Sbjct: 846 FLGPMEGGG 854
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 YPGPAAGGG 9
+ GP GGG
Sbjct: 846 FLGPMEGGG 854
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 YPGPAAGGG 9
+ GP GGG
Sbjct: 846 FLGPMEGGG 854
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 PGPAAGGGG 10
P PAAG GG
Sbjct: 593 PRPAAGRGG 601
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 3 GPAAGGG 9
GP GGG
Sbjct: 850 GPLEGGG 856
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 3 GPAAGGG 9
GP GGG
Sbjct: 850 GPLEGGG 856
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 3 GPAAGGG 9
GP GGG
Sbjct: 849 GPLEGGG 855
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 1 YPGPAAGG 8
Y GP AG
Sbjct: 228 YNGPCAGA 235
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 2 PGPAAGGGG 10
PGP+ G G
Sbjct: 380 PGPSDSGAG 388
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 YPGPAAGGGG 10
YPG + GG
Sbjct: 526 YPGISQSSGG 535
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 YPGPAAGGGG 10
YPG + GG
Sbjct: 526 YPGISQSSGG 535
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 2 PGPAAGG 8
P P+ GG
Sbjct: 4 PNPSVGG 10
>sp|BILF1_EBVB9|G-PROTEIN coupled receptor BILF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 YPGP 4
YPGP
Sbjct: 267 YPGP 270
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 PGPAAGGGG 10
PG AGG
Sbjct: 1420 PGRVAGGAA 1428
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 PGPAAGGGG 10
PG AGG
Sbjct: 1419 PGRVAGGAA 1427
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 PGPAAGGGG 10
PG AGG
Sbjct: 1419 PGRVAGGAA 1427
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GPAAGGGG 10
GP GG G
Sbjct: 247 GPRPGGAG 254
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 2 PGPAAGGGG 10
PGPA+ G G
Sbjct: 682 PGPASVGSG 690
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 PGPAAGGGG 10
PG GG G
Sbjct: 5 PGTEDGGAG 13
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PAAGGG 9
PAAG G
Sbjct: 4 PAAGSG 9
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PAAGGG 9
PAAG G
Sbjct: 4 PAAGSG 9
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 2 PGPAAGGGG 10
P P A GG
Sbjct: 29 PPPTASGGA 37
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GPAAGGGG 10
GP GG G
Sbjct: 247 GPRPGGAG 254
>sp|SPIKE_ADE1H|FIBER protein|Human adenovirus D serotype 15/H9
Query: 1 YPGPAAG 7
YP P AG
Sbjct: 289 YPKPTAG 295
>sp|SPIKE_ADE09|FIBER protein|Human adenovirus D serotype 9
Query: 1 YPGPAAG 7
YP P AG
Sbjct: 289 YPKPTAG 295
>sp|PHOSP_MUMPZ|PHOSPHOPROTEIN virus genotype N (strain
Query: 2 PGPAAGGGG 10
P P AG GG
Sbjct: 82 PPPEAGNGG 90
10|SequenceR|55|46|PAASPYPGPA
>sp|B17_VARV|PROTEIN B17|Variola virus
Query: 1 PAASPYPG 8
P +PYPG
Sbjct: 178 PIEAPYPG 185
>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PAASPYPG 8
P +PYPG
Sbjct: 178 PIEAPYPG 185
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PAASPYPGP 9
P +SP+P P
Sbjct: 632 PFSSPWPEP 640
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 AASPYP 7
AASP+P
Sbjct: 714 AASPFP 719
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 PYPGPA 10
PYP P+
Sbjct: 5195 PYPNPS 5200
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 4 SPYPGP 9
SP PGP
Sbjct: 168 SPVPGP 173
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 PYPGPA 10
PYP P+
Sbjct: 4868 PYPDPS 4873
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 PYPGPA 10
PYP P+
Sbjct: 5233 PYPDPS 5238
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 PYPGPA 10
PYP P+
Sbjct: 5253 PYPDPS 5258
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 PYPGPA 10
PYP P+
Sbjct: 5283 PYPDPS 5288
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 PYPGPA 10
PYP P+
Sbjct: 4893 PYPDPS 4898
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 PYPGPA 10
PYP P+
Sbjct: 5222 PYPDPS 5227
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 PYPGPA 10
PYP P+
Sbjct: 5199 PYPDPS 5204
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 4 SPYPG 8
+PYPG
Sbjct: 238 APYPG 242
>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PAASPYPGP 9
P+A+P PGP
Sbjct: 11 PSATPVPGP 19
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 3 ASPYPGPA 10
SPY PA
Sbjct: 88 GSPYESPA 95
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 PYPGPA 10
PYP P+
Sbjct: 5208 PYPDPS 5213
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 PAASPYP 7
PA SP P
Sbjct: 26 PATSPMP 32
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 1 PAASPYPGPA 10
P ASP P P
Sbjct: 175 PCASPVPQPG 184
>sp|BILF1_EBVB9|G-PROTEIN coupled receptor BILF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 ASPYPGP 9
A YPGP
Sbjct: 264 ARYYPGP 270
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 5 PYPGP 9
P+PGP
Sbjct: 428 PFPGP 432
>sp|UL79_HHV8P|PROTEIN UL79 homolog|Human herpesvirus 8 type P
Query: 6 YPGP 9
YPGP
Sbjct: 212 YPGP 215
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 5 PYPGP 9
P+PGP
Sbjct: 428 PFPGP 432
>sp|GQ2_HHV6U|GLYCOPROTEIN Q2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PAASPYPGP 9
P +SP+P P
Sbjct: 190 PFSSPWPEP 198
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 PAASPYP 7
P ASPYP
Sbjct: 979 PGASPYP 985
>sp|US9_HHV2H|ENVELOPE protein US9|Human herpesvirus 2 (strain HG52)
Query: 1 PAASPYPGPA 10
PAASP P A
Sbjct: 21 PAASPVPAEA 30
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 5 PYPGP 9
P+PGP
Sbjct: 428 PFPGP 432
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 5 PYPGP 9
P+PGP
Sbjct: 428 PFPGP 432
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 AASPYPGPA 10
AA PY GP
Sbjct: 1438 AAGPYNGPT 1446
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 5 PYPGP 9
P+PGP
Sbjct: 428 PFPGP 432
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 5 PYPGP 9
P+PGP
Sbjct: 428 PFPGP 432
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 1 PAASPYPGPA 10
P + YP PA
Sbjct: 751 PTSENYPAPA 760
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 ASPYPGP 9
A P PGP
Sbjct: 215 AHPIPGP 221
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 1 PAASPYP 7
PAA PYP
Sbjct: 399 PAACPYP 405
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 1 PAASPYPGPA 10
P SP+PG A
Sbjct: 464 PDGSPWPGSA 473
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 PAASPYPGPA 10
P SP+PG A
Sbjct: 464 PDGSPWPGSA 473
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 5 PYPGP 9
P+PGP
Sbjct: 428 PFPGP 432
>sp|EBNA2_EBVA8|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PAASPYPGPA 10
P SP PGP+
Sbjct: 364 PENSPTPGPS 373
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 AASPYPGP 9
A P PGP
Sbjct: 217 AQHPIPGP 224
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 AASPYPGP 9
A P PGP
Sbjct: 216 AQHPIPGP 223
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PAASPYPGPA 10
PA PGP+
Sbjct: 571 PAVVAAPGPS 580
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PYPGP 9
PYP P
Sbjct: 320 PYPNP 324
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PYPGP 9
PYP P
Sbjct: 320 PYPNP 324
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PYPGP 9
PYP P
Sbjct: 320 PYPNP 324
>sp|VP2_POVWU|MINOR capsid protein VP2|WU polyomavirus (WUPyV)
Query: 1 PAASPYPGPA 10
P +PYPG A
Sbjct: 136 PLHAPYPGMA 145
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PAASPYPGPA 10
PA PGP+
Sbjct: 571 PAVVAAPGPS 580
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 PAASPYPGP 9
P A PY GP
Sbjct: 852 PRAVPYYGP 860
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 PAASPYPGP 9
P A PY GP
Sbjct: 851 PRAVPYYGP 859
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 PAASPYPGP 9
P A PY GP
Sbjct: 851 PRAVPYYGP 859
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 PAASPYPGP 9
P A PY GP
Sbjct: 852 PRAVPYYGP 860
11|SequenceR|60|51|PGPPPPAASP
>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P
Query: 2 GPPPPAASP 10
G PPP A P
Sbjct: 269 GTPPPEACP 277
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GPPPPAASP 10
G PPP P
Sbjct: 266 GTPPPKDCP 274
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GPPPPAASP 10
G PPP P
Sbjct: 266 GTPPPKDCP 274
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GPPPPAASP 10
G PPP P
Sbjct: 266 GTPPPKDCP 274
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 3 PPPPAAS 9
PPPP+AS
Sbjct: 418 PPPPSAS 424
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 3 PPPPAAS 9
PPPP+AS
Sbjct: 512 PPPPSAS 518
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 3 PPPPAASP 10
PPP A+P
Sbjct: 137 PPPEEAAP 144
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 1 PGPPP 5
P PPP
Sbjct: 49 PSPPP 53
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PGPPP 5
P PPP
Sbjct: 49 PSPPP 53
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 PPPPA 7
PPPPA
Sbjct: 1464 PPPPA 1468
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 PPPPA 7
PPPPA
Sbjct: 1444 PPPPA 1448
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 PGPPPPAASP 10
P P P AA P
Sbjct: 344 PRPAPGAAGP 353
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 PPPPA 7
PPPPA
Sbjct: 1454 PPPPA 1458
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 GPPPPAAS 9
PPPP +
Sbjct: 2863 APPPPPGT 2870
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 PPPPA 7
PPPPA
Sbjct: 1445 PPPPA 1449
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 PPPPAAS 9
PPPPA +
Sbjct: 1417 PPPPAIT 1423
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 GPPPPA 7
PPPPA
Sbjct: 1423 APPPPA 1428
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 PPPPA 7
PPPPA
Sbjct: 1448 PPPPA 1452
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 PPPPAAS 9
PPPPA +
Sbjct: 1420 PPPPAIT 1426
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 PPPPA 7
PPPPA
Sbjct: 1456 PPPPA 1460
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 PPPPA 7
PPPPA
Sbjct: 1443 PPPPA 1447
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 3 PPPPAAS 9
PPPP+AS
Sbjct: 417 PPPPSAS 423
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 PPPPA 7
PPPPA
Sbjct: 1455 PPPPA 1459
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 PPPPA 7
PPPPA
Sbjct: 1445 PPPPA 1449
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 PPPPA 7
PPPPA
Sbjct: 1454 PPPPA 1458
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 PPPPA 7
PPPPA
Sbjct: 1457 PPPPA 1461
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 PPPPA 7
PPPPA
Sbjct: 1446 PPPPA 1450
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 PPPPA 7
PPPPA
Sbjct: 1446 PPPPA 1450
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 GPPPPAA 8
GP PP++
Sbjct: 825 GPGPPSS 831
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GPPPPAA 8
GP PP++
Sbjct: 825 GPGPPSS 831
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GPPPPAA 8
GP PP++
Sbjct: 824 GPGPPSS 830
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 GPPP 5
GPPP
Sbjct: 26 GPPP 29
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 GPPP 5
GPPP
Sbjct: 26 GPPP 29
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 2 GPPP 5
GPPP
Sbjct: 26 GPPP 29
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PGPPP 5
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 PPPPA 7
PPPPA
Sbjct: 1431 PPPPA 1435
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PGPPP 5
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PGPPP 5
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PGPPP 5
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 PGPPP 5
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PGPPP 5
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PGPPP 5
P PPP
Sbjct: 1483 PSPPP 1487
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GPPPPAAS 9
PPPP S
Sbjct: 13 APPPPRPS 20
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GPPPPAAS 9
PPPP S
Sbjct: 13 APPPPRPS 20
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 GPPP 5
GPPP
Sbjct: 32 GPPP 35
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 4 PPPAAS 9
PPPAAS
Sbjct: 629 PPPAAS 634
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PGPPP 5
P PPP
Sbjct: 1073 PSPPP 1077
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PPPPAA 8
P PPAA
Sbjct: 440 PVPPAA 445
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PPPPAA 8
P PPAA
Sbjct: 440 PVPPAA 445
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 PGPPPPAAS 9
PGP PP+A+
Sbjct: 673 PGPSPPSAT 681
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 1 PGPPPPAA 8
P PPP A+
Sbjct: 27 PSPPPTAS 34
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 PGPPPPAAS 9
PGP PP+A+
Sbjct: 670 PGPSPPSAT 678
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPPPA 7
PPPP+
Sbjct: 110 PPPPS 114
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPPPA 7
PPPP+
Sbjct: 110 PPPPS 114
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 PGPPPPAASP 10
PG PPP+ P
Sbjct: 274 PGAPPPSQQP 283
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 PGPPPPAASP 10
PG PPP+ P
Sbjct: 274 PGAPPPSQQP 283
>sp|US20_HCMVT|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 PPPPAA 8
PP PAA
Sbjct: 27 PPSPAA 32
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 PPPP 6
PPPP
Sbjct: 1462 PPPP 1465
>sp|US20_HCMVA|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPPPAA 8
PP PAA
Sbjct: 27 PPSPAA 32
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 PGPPPPAASP 10
PG PPP+ P
Sbjct: 274 PGAPPPSQQP 283
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 PPPP 6
PPPP
Sbjct: 1446 PPPP 1449
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 PPAASP 10
PP++SP
Sbjct: 368 PPSSSP 373
12|SequenceR|65|56|SPPPGPGPPP
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 SPPPGPGPP 9
+PPP P P
Sbjct: 1223 TPPPKPETP 1231
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 5 GPGPP 9
GPGPP
Sbjct: 825 GPGPP 829
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 GPGPP 9
GPGPP
Sbjct: 825 GPGPP 829
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 GPGPP 9
GPGPP
Sbjct: 824 GPGPP 828
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PPGPGPPP 10
PPGP P P
Sbjct: 296 PPGPDPGP 303
Query: 2 PPPGPGP 8
P P PGP
Sbjct: 297 PGPDPGP 303
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PPGPGPPP 10
PPGP P P
Sbjct: 296 PPGPDPGP 303
Query: 2 PPPGPGP 8
P P PGP
Sbjct: 297 PGPDPGP 303
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 4 PGPGPPP 10
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 SPPPGPGP 8
+P PGP P
Sbjct: 223 APNPGPRP 230
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 4 PGPGPPP 10
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 SPPPGPGP 8
+P PGP P
Sbjct: 223 APNPGPRP 230
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 4 PGPGPPP 10
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 SPPPGPGP 8
+P PGP P
Sbjct: 223 APNPGPRP 230
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 4 PGPGPPP 10
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 SPPPGPGP 8
+P PGP P
Sbjct: 223 APNPGPRP 230
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 4 PGPGPPP 10
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 SPPPGPGP 8
+P PGP P
Sbjct: 223 APNPGPRP 230
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 4 PGPGPPP 10
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 SPPPGPGP 8
+P PGP P
Sbjct: 223 APNPGPRP 230
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 4 PGPGPPP 10
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 SPPPGPGP 8
+P PGP P
Sbjct: 223 APNPGPRP 230
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 4 PGPGPPP 10
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 SPPPGPGP 8
+P PGP P
Sbjct: 223 APNPGPRP 230
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 4 PGPGPPP 10
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 2 PPPGPGP 8
P PGP P
Sbjct: 224 PNPGPRP 230
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 4 PGPGPPP 10
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 2 PPPGPGP 8
P PGP P
Sbjct: 224 PNPGPRP 230
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 PPGPGPPP 10
PPG G PP
Sbjct: 469 PPGAGVPP 476
Query: 2 PPPGPGP 8
PP GP P
Sbjct: 720 PPGGPVP 726
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 SPPPGPG 7
+PPP PG
Sbjct: 2863 APPPPPG 2869
>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 2 PPPGPGPP 9
PP G PP
Sbjct: 65 PPGGKAPP 72
Query: 3 PPGPGPPP 10
PPG PP
Sbjct: 65 PPGGKAPP 72
>sp|HBZ_HTL1A|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 3 PPGPGPPP 10
PPG PP
Sbjct: 65 PPGEKAPP 72
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PPGPGPPP 10
PP PG P
Sbjct: 363 PPNPGGDP 370
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 2 PPPGPGPP 9
PPPG PP
Sbjct: 182 PPPGSCPP 189
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 SPPPGPGPP 9
+PPPG PP
Sbjct: 181 NPPPGSCPP 189
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 PPPGPG 7
P PGPG
Sbjct: 3070 PRPGPG 3075
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PGPGPPP 10
P P PPP
Sbjct: 292 PTPAPPP 298
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PPPGPG 7
PPPG G
Sbjct: 607 PPPGAG 612
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PPPGPG 7
PPPG G
Sbjct: 607 PPPGAG 612
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PPPGPG 7
PPPG G
Sbjct: 607 PPPGAG 612
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 PPGPGPP 9
PPG PP
Sbjct: 466 PPGANPP 472
Query: 2 PPPGPGP 8
PP GP P
Sbjct: 716 PPGGPIP 722
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 2 PPPGPGPPP 10
P PG PP
Sbjct: 346 PAPGAAGPP 354
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 2 PPPGPGP 8
PPP P P
Sbjct: 50 PPPVPSP 56
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 2 PPPGPGP 8
PPP P P
Sbjct: 50 PPPVPSP 56
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 PPGPGPP 9
PPG PP
Sbjct: 476 PPGAKPP 482
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 PPGPGPP 9
PPG PP
Sbjct: 477 PPGADPP 483
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 2 PPPGPGPPP 10
P PG PP
Sbjct: 346 PVPGAAGPP 354
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 PPGPGPP 9
P GPG P
Sbjct: 5 PGGPGKP 11
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 PPGPGPP 9
PPG PP
Sbjct: 477 PPGADPP 483
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 PPGPGPP 9
PPG PP
Sbjct: 466 PPGADPP 472
Query: 2 PPPGPGP 8
PP GP P
Sbjct: 716 PPGGPVP 722
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 PPGPGPP 9
PPG G P
Sbjct: 466 PPGAGAP 472
Query: 2 PPPGPGP 8
PP GP P
Sbjct: 716 PPGGPVP 722
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 PPGPGPP 9
PPG PP
Sbjct: 475 PPGAKPP 481
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 PPGPGPP 9
PPG PP
Sbjct: 476 PPGAQPP 482
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 SPPPGPGPP 9
+ PPG G P
Sbjct: 1813 ATPPGRGDP 1821
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PPPG 5
PPPG
Sbjct: 205 PPPG 208
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 PPPG 5
PPPG
Sbjct: 6065 PPPG 6068
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 PPPG 5
PPPG
Sbjct: 6042 PPPG 6045
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 PPPG 5
PPPG
Sbjct: 6048 PPPG 6051
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 4 PGPGPPP 10
P PG PP
Sbjct: 387 PAPGSPP 393
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 SPPPGPGPP 9
+ PPG G P
Sbjct: 1813 ATPPGRGDP 1821
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 4 PGPGPPP 10
P P PPP
Sbjct: 292 PTPEPPP 298
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 PPGPGPP 9
PPG PP
Sbjct: 476 PPGAQPP 482
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 PPGPGPP 9
PPG G P
Sbjct: 466 PPGAGAP 472
Query: 2 PPPGPGP 8
PP GP P
Sbjct: 716 PPGGPVP 722
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 PPGPGPP 9
PPG G P
Sbjct: 467 PPGAGAP 473
Query: 2 PPPGPGP 8
PP GP P
Sbjct: 717 PPGGPIP 723
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 SPPPG 5
SPPPG
Sbjct: 2136 SPPPG 2140
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 PPGPGPP 9
PPG G P
Sbjct: 466 PPGAGAP 472
Query: 2 PPPGPGP 8
PP GP P
Sbjct: 714 PPGGPVP 720
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 SPPPGP 6
SP PGP
Sbjct: 168 SPVPGP 173
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 PPGPGPP 9
PPG G P
Sbjct: 466 PPGAGVP 472
Query: 2 PPPGPGP 8
PP GP P
Sbjct: 716 PPGGPIP 722
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 4 PGPGPPP 10
P P PPP
Sbjct: 1763 PAPIPPP 1769
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PGPGPPP 10
PG PPP
Sbjct: 420 PGDSPPP 426
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PGPGPPP 10
PG PPP
Sbjct: 420 PGDSPPP 426
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PPPGPGPP 9
PP P PP
Sbjct: 935 PPDAPMPP 942
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 SPPPG 5
SPPPG
Sbjct: 2136 SPPPG 2140
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PPPGPGPP 9
PP P PP
Sbjct: 935 PPDAPMPP 942
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PGPGPPP 10
P PGP P
Sbjct: 214 PSPGPMP 220
Query: 2 PPPGPGP 8
P PGP P
Sbjct: 214 PSPGPMP 220
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 4 PGPGPPP 10
P P PPP
Sbjct: 1766 PAPIPPP 1772
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPPGPGPP 9
PP P PP
Sbjct: 935 PPDAPVPP 942
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 PPGPGPP 9
PPG G P
Sbjct: 545 PPGAGEP 551
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PPGPG 7
PP PG
Sbjct: 321 PPAPG 325
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 6 PGPP 9
PGPP
Sbjct: 15 PGPP 18
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 SPPPGP 6
+PP GP
Sbjct: 693 NPPEGP 698
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 SPPPGP 6
+PP GP
Sbjct: 693 NPPEGP 698
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PGPGPPP 10
P PGP P
Sbjct: 214 PSPGPMP 220
Query: 2 PPPGPGP 8
P PGP P
Sbjct: 214 PSPGPMP 220
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 PPPGPGP 8
PP GP P
Sbjct: 717 PPGGPFP 723
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 1 SPPPGPG 7
+PP PG
Sbjct: 202 TPPESPG 208
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 PPGPGPP 9
PPG G P
Sbjct: 466 PPGAGVP 472
Query: 2 PPPGPGP 8
PP GP P
Sbjct: 717 PPGGPIP 723
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 2 PPPG 5
PPPG
Sbjct: 14 PPPG 17
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PPPG 5
PPPG
Sbjct: 14 PPPG 17
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 4 PGPGPPP 10
PGPG P
Sbjct: 266 PGPGETP 272
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 PPGPGPP 9
PPG G P
Sbjct: 468 PPGAGVP 474
Query: 2 PPPGPGP 8
PP GP P
Sbjct: 715 PPGGPVP 721
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 2 PPPG 5
PPPG
Sbjct: 14 PPPG 17
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 2 PPPG 5
PPPG
Sbjct: 14 PPPG 17
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 2 PPPG 5
PPPG
Sbjct: 14 PPPG 17
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PPPG 5
PPPG
Sbjct: 14 PPPG 17
>sp|PHOSP_RABVC|PHOSPHOPROTEIN virus (strain CVS-11) (RABV)
Query: 5 GPGPP 9
PGPP
Sbjct: 178 APGPP 182
>sp|PHOSP_RABVA|PHOSPHOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 5 GPGPP 9
PGPP
Sbjct: 178 APGPP 182
>sp|PHOSP_RABVR|PHOSPHOPROTEIN virus (strain China/MRV) (RABV)
Query: 5 GPGPP 9
PGPP
Sbjct: 178 APGPP 182
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 PPPGPGPPP 10
P P PPP
Sbjct: 785 PAPFYSPPP 793
>sp|BLRF2_EBVB9|TEGUMENT protein BLRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PPPGPGPPP 10
P PG G P
Sbjct: 126 PSPGEGTRP 134
>sp|BLRF2_EBVA8|TEGUMENT protein BLRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PPPGPGPPP 10
P PG G P
Sbjct: 126 PSPGEGTRP 134
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 PPPGPGP 8
PP GP P
Sbjct: 717 PPGGPIP 723
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 SPPPGPG 7
+P P PG
Sbjct: 2885 APEPAPG 2891
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 1 SPPPGPGPPP 10
SP P GPPP
Sbjct: 44 SPDPADGPPP 53
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 SPPPGPGPPP 10
S P GPG P
Sbjct: 260 SEPSGPGAPA 269
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 2 PPPGPGPP 9
PPP P P
Sbjct: 438 PPPTPTDP 445
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 1 SPPPGPGPPP 10
S P GPG P
Sbjct: 260 SEPSGPGAPA 269
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SPPPGPGP 8
SPP P P
Sbjct: 402 SPPESPVP 409
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 PPGPGPP 9
PPG G P
Sbjct: 465 PPGIGKP 471
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 PPPGPGP 8
PP GP P
Sbjct: 717 PPGGPIP 723
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 SPPPGPGPPP 10
S P GPG P
Sbjct: 260 SEPSGPGAPA 269
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 1 SPPPGPGPPP 10
S P GPG P
Sbjct: 260 SEPSGPGAPA 269
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 1 SPPPGPGPPP 10
S P GPG P
Sbjct: 260 SEPSGPGAPA 269
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 PPPGPG 7
PPPGP
Sbjct: 158 PPPGPA 163
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 1 SPPPGPGPPP 10
S P GPG P
Sbjct: 260 SEPSGPGAPA 269
>sp|MATRX_MEASY|MATRIX protein|Measles virus (strain Yamagata-1) (MeV)
Query: 1 SPPPGPG 7
SPPPG G
Sbjct: 25 SPPPGAG 31
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 SPPPGPGP 8
SPP P P
Sbjct: 402 SPPESPVP 409
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 1 SPPPGPGPPP 10
S P GPG P
Sbjct: 260 SEPSGPGAPA 269
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 PPGPGPP 9
PPG G P
Sbjct: 523 PPGAGKP 529
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 PPGPGPP 9
PPG G P
Sbjct: 523 PPGAGKP 529
13|SequenceR|70|61|PSSQRSPPPG
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PSSQRSPPPG 10
P R+P PG
Sbjct: 352 PRPSRTPSPG 361
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PSSQRSPPPG 10
P R+P PG
Sbjct: 352 PRPSRTPSPG 361
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PSSQRSPPPG 10
P R+P PG
Sbjct: 352 PRPSRTPSPG 361
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 4 QRSPPPG 10
+R PPPG
Sbjct: 11 KRDPPPG 17
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 4 QRSPPPG 10
+R PPPG
Sbjct: 11 KRDPPPG 17
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 4 QRSPPPG 10
+R PPPG
Sbjct: 11 KRDPPPG 17
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 4 QRSPPPG 10
+R PPPG
Sbjct: 11 KRDPPPG 17
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 4 QRSPPPG 10
+R PPPG
Sbjct: 11 KRDPPPG 17
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 QRSPPPG 10
+R PPPG
Sbjct: 11 KRDPPPG 17
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 QRSPPPG 10
QRS PPG
Sbjct: 1583 QRSDPPG 1589
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 2 SSQRSPPPG 10
++QR+P PG
Sbjct: 541 AAQRNPNPG 549
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 SSQRSPPPG 10
++QR+P PG
Sbjct: 541 AAQRNPNPG 549
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 2 SSQRSPPPG 10
+S RSPP G
Sbjct: 292 TSTRSPPKG 300
>sp|NCAP_HENDH|NUCLEOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 SSQRSPP 8
SS+R+PP
Sbjct: 496 SSERNPP 502
>sp|VE8E2_HPV63|PROTEIN E8^E2C|Human papillomavirus type 63
Query: 2 SSQRSPPPG 10
+S RSPP G
Sbjct: 101 TSTRSPPKG 109
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 RSPPPG 10
R PPPG
Sbjct: 605 RDPPPG 610
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 RSPPPG 10
R PPPG
Sbjct: 605 RDPPPG 610
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 RSPPPG 10
R PPPG
Sbjct: 605 RDPPPG 610
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 PSSQRSPPP 9
PS+ R PPP
Sbjct: 462 PSAARLPPP 470
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 PSSQRSPPP 9
PS+ R PPP
Sbjct: 457 PSAARLPPP 465
14|SequenceR|75|66|DSASPPSSQR
>sp|VE6_HPV20|PROTEIN E6|Human papillomavirus 20
Query: 3 ASPPSSQ 9
A+PPSS+
Sbjct: 2 ATPPSSE 8
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 5 PPSSQR 10
PP SQR
Sbjct: 251 PPCSQR 256
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 5 PPSSQR 10
PP SQR
Sbjct: 267 PPCSQR 272
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 5 PPSSQR 10
PP SQR
Sbjct: 270 PPCSQR 275
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 5 PPSSQR 10
PP SQR
Sbjct: 267 PPCSQR 272
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 DSASPPSS 8
DSA PP+S
Sbjct: 2990 DSAPPPAS 2997
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 5 PPSSQR 10
PP SQR
Sbjct: 274 PPCSQR 279
15|SequenceR|80|71|NSGFCDSASP
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 3 GFCDSASP 10
G CD+A+P
Sbjct: 1154 GLCDAANP 1161
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 4 FCDSA 8
FCDSA
Sbjct: 568 FCDSA 572
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 GFCDSA 8
G CDSA
Sbjct: 591 GMCDSA 596
>sp|PG108_VAR67|ENVELOPE protein H3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 SGFCDS 7
SGFC++
Sbjct: 84 SGFCNT 89
>sp|PG108_VACCC|ENVELOPE protein H3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SGFCDS 7
SGFC++
Sbjct: 83 SGFCNT 88
>sp|PG108_MONPV|ENVELOPE protein OPG108|Monkeypox virus (MPXV)
Query: 2 SGFCDS 7
SGFC++
Sbjct: 83 SGFCNT 88
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 NSGFCDSAS 9
+GFCD S
Sbjct: 62 ETGFCDFVS 70
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 NSGFCDSAS 9
+GFCD S
Sbjct: 62 ETGFCDFVS 70
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 NSGFCDSAS 9
+GFCD S
Sbjct: 62 ETGFCDFVS 70
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 GFCDSASP 10
G+C +A+P
Sbjct: 357 GYCITATP 364
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 SGFCD 6
SG+CD
Sbjct: 465 SGYCD 469
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 NSGFCDSASP 10
NS FC A P
Sbjct: 470 NSDFCPCADP 479
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 NSGFCDSASP 10
NS FC A P
Sbjct: 470 NSDFCPCADP 479
>sp|VE6_HPV31|PROTEIN E6|Human papillomavirus 31
Query: 1 NSGFCD 6
N G CD
Sbjct: 93 NKGICD 98
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 GFCD 6
GFCD
Sbjct: 4341 GFCD 4344
16|SequenceR|85|76|GGGNGNSGFC
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 GGNGNSGFC 10
GGNG GFC
Sbjct: 1711 GGNGRQGFC 1719
Query: 2 GGNGNSGF 9
GGNG GF
Sbjct: 989 GGNGLVGF 996
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 GGNGNSGFC 10
GGNG GFC
Sbjct: 1711 GGNGRQGFC 1719
Query: 2 GGNGNSGF 9
GGNG GF
Sbjct: 989 GGNGLVGF 996
>sp|VP40_EBOZM|MATRIX protein VP40|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 GGNGNSGF 9
GGN N+GF
Sbjct: 29 GGNSNTGF 36
>sp|VP40_EBOZ5|MATRIX protein VP40|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 GGNGNSGF 9
GGN N+GF
Sbjct: 29 GGNSNTGF 36
>sp|VP40_EBOG4|MATRIX protein VP40|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 GGNGNSGF 9
GGN N+GF
Sbjct: 29 GGNSNTGF 36
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1712 GGNGHQGF 1719
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1711 GGNGHQGF 1718
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1713 GGNGHQGF 1720
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1711 GGNGHQGF 1718
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1721 GGNGHQGF 1728
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1709 GGNGHQGF 1716
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1714 GGNGHQGF 1721
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1702 GGNGHQGF 1709
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1702 GGNGHQGF 1709
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1701 GGNGHQGF 1708
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1701 GGNGHQGF 1708
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1705 GGNGHQGF 1712
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1700 GGNGHQGF 1707
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1719 GGNGHQGF 1726
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1703 GGNGHQGF 1710
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1703 GGNGHQGF 1710
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1703 GGNGHQGF 1710
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1725 GGNGSHGF 1732
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1725 GGNGSHGF 1732
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1726 GGNGSHGF 1733
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1726 GGNGSHGF 1733
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1728 GGNGSHGF 1735
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1728 GGNGSHGF 1735
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1733 GGNGSHGF 1740
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 1725 GGNGSHGF 1732
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 GGNGNSGF 9
GGNG GF
Sbjct: 1699 GGNGRQGF 1706
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 GGNGNSGF 9
GGNG GF
Sbjct: 1684 GGNGRDGF 1691
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 GGNGNSGF 9
GGNG GF
Sbjct: 1670 GGNGRDGF 1677
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 GGNGNSGF 9
GGNG GF
Sbjct: 1677 GGNGRDGF 1684
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 GGNGNSGF 9
GGNG GF
Sbjct: 1677 GGNGRDGF 1684
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 GGNGNSGF 9
GGNG GF
Sbjct: 1673 GGNGRDGF 1680
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 GGNGNSGF 9
GGNG GF
Sbjct: 1698 GGNGRRGF 1705
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 GNGNSGFC 10
NG +GFC
Sbjct: 2426 ANGGTGFC 2433
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 GNGNSGFC 10
NG +GFC
Sbjct: 2464 ANGGTGFC 2471
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 GNGNSGFC 10
NG +GFC
Sbjct: 2484 ANGGTGFC 2491
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 GNGNSGFC 10
NG +GFC
Sbjct: 2514 ANGGTGFC 2521
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 GNGNSGFC 10
NG +GFC
Sbjct: 2426 ANGGTGFC 2433
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 GNGNSGFC 10
NG +GFC
Sbjct: 2464 ANGGTGFC 2471
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 GNGNSGFC 10
NG +GFC
Sbjct: 2484 ANGGTGFC 2491
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 GNGNSGFC 10
NG +GFC
Sbjct: 2514 ANGGTGFC 2521
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 GGNGNSGF 9
GGNG GF
Sbjct: 1717 GGNGAQGF 1724
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 GNGNSGFC 10
NG GFC
Sbjct: 2438 ANGGKGFC 2445
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GNGNSGFC 10
NG GFC
Sbjct: 2438 ANGGKGFC 2445
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 GNGNSGFC 10
NG GFC
Sbjct: 2415 ANGGRGFC 2422
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GNGNSGFC 10
NG GFC
Sbjct: 2415 ANGGRGFC 2422
>sp|POLG_ECHO9|GENOME polyprotein|Echo 9 virus (EV-9) (Coxsackievirus
Query: 2 GGNGNSGF 9
GGNG+ GF
Sbjct: 185 GGNGHHGF 192
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 1 GGGNGNSGFC 10
GGG G FC
Sbjct: 132 GGGCGAVAFC 141
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 1 GGGNGNS 7
GGG+GNS
Sbjct: 192 GGGSGNS 198
>sp|PG144_VARV|VIRION membrane protein OPG144 precursor|Variola virus
Query: 2 GGNGNS 7
GGNGN+
Sbjct: 109 GGNGNT 114
>sp|PG144_VAR67|VIRION membrane protein OPG144 precursor|Variola virus (isolate
Query: 2 GGNGNS 7
GGNGN+
Sbjct: 109 GGNGNT 114
>sp|PG144_VACCC|VIRION membrane protein OPG144 precursor|Vaccinia virus (strain
Query: 2 GGNGNS 7
GGNGN+
Sbjct: 109 GGNGNT 114
>sp|PG144_MONPV|VIRION membrane protein OPG144 precursor|Monkeypox virus (MPXV)
Query: 2 GGNGNS 7
GGNGN+
Sbjct: 110 GGNGNT 115
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 GGNGNSGF 9
GGNG GF
Sbjct: 989 GGNGLVGF 996
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 GGNGNSGF 9
GGNG GF
Sbjct: 989 GGNGLVGF 996
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 4 NGNSGFC 10
NGN G C
Sbjct: 359 NGNVGHC 365
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 4 NGNSGFC 10
NGN G C
Sbjct: 359 NGNVGHC 365
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GGNGNSG 8
GGN N+G
Sbjct: 458 GGNNNNG 464
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GGNGNSG 8
GGN N+G
Sbjct: 463 GGNNNNG 469
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GGNGNSG 8
GGN N+G
Sbjct: 458 GGNNNNG 464
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 GGNGNSG 8
GG G+SG
Sbjct: 205 GGKGDSG 211
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GGNGNSG 8
GG G+SG
Sbjct: 206 GGKGDSG 212
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 GGNGNSG 8
GG G+SG
Sbjct: 205 GGKGDSG 211
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GGNGNSG 8
GG G+SG
Sbjct: 207 GGKGDSG 213
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GGGNGNSGFC 10
G G G G+C
Sbjct: 782 GPGEGPGGWC 791
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GGGNGNSGFC 10
G G G G+C
Sbjct: 782 GPGEGPGGWC 791
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GGGNGNSGFC 10
G G G G+C
Sbjct: 782 GPGEGPGGWC 791
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 GNGNSGFC 10
NG S FC
Sbjct: 2187 ANGGSKFC 2194
Query: 5 GNSGFC 10
GN+G C
Sbjct: 2607 GNAGVC 2612
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GGNGNSG 8
GG G+SG
Sbjct: 207 GGKGDSG 213
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 GNGNSGFC 10
NG S FC
Sbjct: 2187 ANGGSKFC 2194
Query: 5 GNSGFC 10
GN+G C
Sbjct: 2607 GNAGVC 2612
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 GGNGNSG 8
GG G+SG
Sbjct: 210 GGRGDSG 216
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 2 GGNGNSG 8
GG G+SG
Sbjct: 210 GGRGDSG 216
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GGNGNSG 8
GG G+SG
Sbjct: 207 GGKGDSG 213
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 GGNGNSG 8
GG G+SG
Sbjct: 210 GGRGDSG 216
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 2 GGNGNS 7
GG GNS
Sbjct: 607 GGKGNS 612
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GGNGNS 7
GG GNS
Sbjct: 619 GGKGNS 624
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 2 GGNGNS 7
GG GNS
Sbjct: 607 GGKGNS 612
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 5 GNSGFC 10
GNS FC
Sbjct: 131 GNSTFC 136
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 3 GNGNSGFC 10
G+G FC
Sbjct: 191 GHGTESFC 198
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 GNGNSGFC 10
G+G FC
Sbjct: 191 GHGTESFC 198
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 GNGNSGFC 10
G G S FC
Sbjct: 147 GQGGSLFC 154
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 GNGNSGFC 10
G G S FC
Sbjct: 78 GQGGSLFC 85
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GGGNGNSGF 9
GGGN N G+
Sbjct: 736 GGGN-NEGY 743
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 1 GGGNGN 6
GGNGN
Sbjct: 191 AGGNGN 196
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 4 NGNSGFC 10
NG G+C
Sbjct: 140 NGECGWC 146
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 2 GGNGNS 7
G NGNS
Sbjct: 584 GDNGNS 589
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GGGNGNSGFC 10
G G G G C
Sbjct: 1682 GKGEGLPGMC 1691
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GGGNGNSGFC 10
G G G G C
Sbjct: 1682 GKGEGLPGMC 1691
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GGGNGNSGFC 10
G G G G C
Sbjct: 1682 GKGEGLPGMC 1691
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GGGNGNSGFC 10
G G G G C
Sbjct: 1682 GKGEGLPGMC 1691
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GGGNGNSGFC 10
G G G G C
Sbjct: 1682 GKGEGLPGMC 1691
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GGGNGNSGFC 10
G G G G C
Sbjct: 1516 GKGEGLPGMC 1525
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GGGNGNSGFC 10
G G G G C
Sbjct: 1682 GKGEGLPGMC 1691
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GGGNGNSGFC 10
G G G G C
Sbjct: 1682 GKGEGLPGMC 1691
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GGGNGNSGFC 10
G G G G C
Sbjct: 1680 GKGEGLPGMC 1689
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GGGNGNSGFC 10
G G G G C
Sbjct: 1682 GKGEGLPGMC 1691
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 GNSGFC 10
GN+G C
Sbjct: 2581 GNTGVC 2586
17|SequenceR|90|81|GPRFAGGGNG
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 GPRFAGGGN 9
PR AGGG+
Sbjct: 773 APRLAGGGS 781
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 GPRFAG 6
GPRF G
Sbjct: 858 GPRFGG 863
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GPRFAGG 7
GP+FAG
Sbjct: 447 GPKFAGA 453
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PRFAGGG 8
PR GGG
Sbjct: 408 PRVTGGG 414
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PRFAGGG 8
PR GGG
Sbjct: 418 PRVTGGG 424
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PRFAGGG 8
PR GGG
Sbjct: 418 PRVTGGG 424
>sp|GP42_EBVG|GLYCOPROTEIN 42|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PRFAGGG 8
PR GGG
Sbjct: 29 PRVRGGG 35
>sp|GP42_EBVB9|GLYCOPROTEIN 42|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PRFAGGG 8
PR GGG
Sbjct: 29 PRVRGGG 35
>sp|GP42_EBVA8|GLYCOPROTEIN 42|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PRFAGGG 8
PR GGG
Sbjct: 29 PRVRGGG 35
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 PRFAGGG 8
P FAGG
Sbjct: 1281 PAFAGGA 1287
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PRFAGGGNG 10
PR AGG G
Sbjct: 687 PRRAGGPYG 695
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PRFAGGGNG 10
PR AGG G
Sbjct: 687 PRRAGGPYG 695
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 RFAGGGNG 10
++AGGG
Sbjct: 1326 KYAGGGQA 1333
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 RFAGGGNG 10
++AGGG
Sbjct: 1326 KYAGGGQA 1333
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 RFAGGGNG 10
++AGGG
Sbjct: 1326 KYAGGGQA 1333
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 RFAGGGNG 10
++AGGG
Sbjct: 1326 KYAGGGQA 1333
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 RFAGGGNG 10
++AGGG
Sbjct: 1326 KYAGGGQA 1333
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GPRFAGG 7
GP AGG
Sbjct: 1374 GPLIAGG 1380
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GPRFAGG 7
GP AGG
Sbjct: 1374 GPMVAGG 1380
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GPRFAGG 7
GP AGG
Sbjct: 1374 GPMVAGG 1380
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GPRFAGG 7
GP AGG
Sbjct: 1374 GPMVAGG 1380
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GPRFAGG 7
GP AGG
Sbjct: 1374 GPMVAGG 1380
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GPRFAGG 7
GP AGG
Sbjct: 1374 GPMVAGG 1380
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GPRFAGG 7
GP AGG
Sbjct: 1375 GPLIAGG 1381
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GPRFAGG 7
GP AGG
Sbjct: 1375 GPLIAGG 1381
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 3 RFAGGGN 9
RF GGN
Sbjct: 575 RFTWGGN 581
18|SequenceR|95|86|LLRRSGPRFA
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LLRRSGPRFA 10
LLRR PR A
Sbjct: 25 LLRRCDPRVA 34
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 LLRRSGPRF 9
LLR+S P+F
Sbjct: 183 LLRKSPPQF 191
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LLRRSGPRF 9
LLR+S P+F
Sbjct: 183 LLRKSPPQF 191
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 RSGPRF 9
RSGPR+
Sbjct: 2773 RSGPRY 2778
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 4 RSGPRF 9
R+GPRF
Sbjct: 474 RAGPRF 479
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 LLRRSGPRFA 10
LL R GPR
Sbjct: 36 LLPRKGPRLG 45
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 RSGPRF 9
R+GPR+
Sbjct: 2769 RNGPRY 2774
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 4 RSGPRF 9
R+GP+F
Sbjct: 474 RTGPKF 479
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 3 RRSGPRFA 10
RR+G RF+
Sbjct: 290 RRTGVRFS 297
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 LLRRSGPR 8
L RRS PR
Sbjct: 2897 LARRSRPR 2904
19|SequenceR|100|91|PGGLGLLRRS
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 PGGLGLL 7
PGGLG+L
Sbjct: 1861 PGGLGIL 1867
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 PGGLGLL 7
PGGLG+L
Sbjct: 1858 PGGLGIL 1864
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 GGLGLLRRS 10
G LGL +RS
Sbjct: 491 GSLGLRKRS 499
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 GGLGLLRRS 10
G LGL +RS
Sbjct: 491 GSLGLRKRS 499
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 GGLGLLRRS 10
G LGL +RS
Sbjct: 491 GSLGLRKRS 499
>sp|PRO_ADE04|PROTEASE adenovirus E serotype 4
Query: 5 GLLRRS 10
GLLRRS
Sbjct: 92 GLLRRS 97
>sp|PRO_ADE03|PROTEASE adenovirus B serotype 3
Query: 5 GLLRRS 10
GLLRRS
Sbjct: 96 GLLRRS 101
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 1 PGGLGLLR 8
PGG LLR
Sbjct: 576 PGGGDLLR 583
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 2 GGLGLLRRS 10
GG+ L+R+S
Sbjct: 120 GGVTLVRKS 128
20|SequenceR|105|96|VFPRPPGGLG
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VFPRPPG 7
++PRPPG
Sbjct: 161 LYPRPPG 167
>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VFPRPPG 7
++PRPPG
Sbjct: 161 LYPRPPG 167
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 PPGGLG 10
PPGGLG
Sbjct: 466 PPGGLG 471
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 PRPPGG 8
PRPPG
Sbjct: 247 PRPPGA 252
>sp|PHOSP_RABVS|PHOSPHOPROTEIN virus (strain SAD B19)
Query: 2 FPRPPG 7
FP PPG
Sbjct: 133 FPNPPG 138
>sp|PHOSP_RABVI|PHOSPHOPROTEIN virus (strain India) (RABV)
Query: 2 FPRPPG 7
FP PPG
Sbjct: 133 FPNPPG 138
>sp|PHOSP_RABVH|PHOSPHOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 FPRPPG 7
FP PPG
Sbjct: 133 FPNPPG 138
>sp|PHOSP_RABVP|PHOSPHOPROTEIN virus (strain Pasteur vaccins
Query: 2 FPRPPG 7
FP PPG
Sbjct: 133 FPNPPG 138
>sp|PHOSP_RABVM|PHOSPHOPROTEIN virus (strain PM) (RABV)
Query: 2 FPRPPG 7
FP PPG
Sbjct: 133 FPNPPG 138
>sp|PHOSP_RABVE|PHOSPHOPROTEIN virus (strain ERA) (RABV)
Query: 2 FPRPPG 7
FP PPG
Sbjct: 133 FPNPPG 138
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 RPPGGL 9
RPPGGL
Sbjct: 441 RPPGGL 446
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 1 VFPRPPG 7
+FP PPG
Sbjct: 962 MFPLPPG 968
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 2 FPRPPGGLG 10
FP P GG G
Sbjct: 472 FPDPDGGHG 480
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 FPRPP 6
FP+PP
Sbjct: 1771 FPQPP 1775
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 FPRPP 6
FP+PP
Sbjct: 1771 FPQPP 1775
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 FPRPP 6
FP+PP
Sbjct: 1771 FPQPP 1775
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 PRPPGGLG 10
PRPP GL
Sbjct: 13 PRPPRGLA 20
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 PRPPGGLG 10
PRPP GL
Sbjct: 13 PRPPRGLA 20
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 PRPPGGLG 10
PRPP GL
Sbjct: 13 PRPPRGLA 20
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 VFPRPP 6
+FP PP
Sbjct: 545 LFPSPP 550
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 PRPPGGLG 10
PRPP GL
Sbjct: 13 PRPPRGLA 20
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 6 PGGLG 10
PGGLG
Sbjct: 283 PGGLG 287
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VFPRPP 6
+FPR P
Sbjct: 548 IFPRKP 553
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 FPRPPG 7
F RPPG
Sbjct: 1330 FKRPPG 1335
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 PRPPGGLG 10
PRPP GL
Sbjct: 13 PRPPRGLA 20
>sp|PHOSP_RABVR|PHOSPHOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 FPRPP 6
FP PP
Sbjct: 133 FPNPP 137
>sp|PHOSP_RABVC|PHOSPHOPROTEIN virus (strain CVS-11) (RABV)
Query: 2 FPRPP 6
FP PP
Sbjct: 133 FPNPP 137
>sp|PHOSP_RABVA|PHOSPHOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 2 FPRPP 6
FP PP
Sbjct: 133 FPNPP 137
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 FPRPPGGL 9
FPR PG L
Sbjct: 99 FPRDPGQL 106
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 FPRPPGGL 9
FPR PG L
Sbjct: 99 FPRDPGQL 106
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 FPRPPGGL 9
FPR PG L
Sbjct: 99 FPRDPGQL 106
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 PRPPGGLG 10
PRPP GL
Sbjct: 13 PRPPRGLA 20
>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PRPPGG 8
P PPGG
Sbjct: 52 PVPPGG 57
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 PRPPGGLG 10
PRPP GL
Sbjct: 13 PRPPRGLA 20
>sp|EV45_HHV23|ENVELOPE protein UL45|Human herpesvirus 2 (strain 333)
Query: 2 FPRPPGGL 9
+PR PGG
Sbjct: 151 YPRSPGGF 158
>sp|EV45_HHV2H|ENVELOPE protein UL45|Human herpesvirus 2 (strain HG52)
Query: 2 FPRPPGGL 9
+PR PGG
Sbjct: 151 YPRSPGGF 158
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 2 FPRPPGGL 9
FPR PG L
Sbjct: 99 FPRDPGQL 106
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 PRPPGGL 9
P PP G+
Sbjct: 2893 PEPPAGV 2899
>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 PRPPGG 8
P PPGG
Sbjct: 52 PVPPGG 57
>sp|UL144_HCMVM|MEMBRANE glycoprotein UL144|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 PPGGLG 10
PP GLG
Sbjct: 36 PPCGLG 41
>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PRPPGG 8
P PPGG
Sbjct: 52 PVPPGG 57
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 FPRPPGG 8
+P+PPG
Sbjct: 1111 WPKPPGA 1117
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 PRPPGGL 9
P PP G+
Sbjct: 2895 PEPPSGV 2901
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 PRPPGG 8
P PP G
Sbjct: 2893 PEPPAG 2898
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 PRPPGG 8
P PP G
Sbjct: 2893 PEPPAG 2898
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 PRPPGG 8
P PP G
Sbjct: 2893 PEPPAG 2898
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 PRPPGG 8
P PP G
Sbjct: 2873 PEPPAG 2878
>sp|E3B14_ADE12|EARLY E3B 12.7 kDa protein|Human adenovirus A serotype 12
Query: 1 VFPRPP 6
VFP PP
Sbjct: 89 VFPEPP 94
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 PRPPGGLG 10
PRPP GL
Sbjct: 13 PRPPRGLA 20
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 PRPPGGLG 10
PRPP GL
Sbjct: 13 PRPPRGLA 20
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 5 PPGGL 9
PPGG+
Sbjct: 294 PPGGI 298
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 5 PPGGL 9
PPGG+
Sbjct: 294 PPGGI 298
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 5 PPGGL 9
PPGG+
Sbjct: 294 PPGGI 298
>sp|EV45_HHV11|ENVELOPE protein UL45|Human herpesvirus 1 (strain 17)
Query: 2 FPRPPGGL 9
+PR PGG
Sbjct: 151 YPRSPGGF 158
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 326 PRPKDGTG 333
>sp|EV45_HHV1M|ENVELOPE protein UL45|Human herpesvirus 1 (strain MP)
Query: 2 FPRPPGGL 9
+PR PGG
Sbjct: 151 YPRSPGGF 158
>sp|EV45_HHV1K|ENVELOPE protein UL45|Human herpesvirus 1 (strain KOS)
Query: 2 FPRPPGGL 9
+PR PGG
Sbjct: 151 YPRSPGGF 158
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 5 PPGGL 9
PPGG+
Sbjct: 294 PPGGI 298
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 PRPPGGLG 10
PRPP GL
Sbjct: 13 PRPPRGLA 20
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 326 PRPKDGTG 333
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 PRPPGG 8
P PP G
Sbjct: 2886 PEPPAG 2891
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 311 PRPEDGTG 318
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 1 VFPRPPG 7
FP PPG
Sbjct: 377 AFPEPPG 383
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 326 PRPNDGTG 333
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 326 PRPNDGTG 333
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 311 PRPNDGTG 318
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 326 PRPNDGTG 333
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 306 PRPNDGTG 313
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 306 PRPNDGTG 313
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 326 PRPNDGTG 333
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 326 PRPNDGTG 333
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 326 PRPNDGTG 333
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 326 PRPNDGTG 333
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VFPRPPGGL 9
+ P+PP G+
Sbjct: 314 ISPQPPSGV 322
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VFPRPPGG 8
V+ RP GG
Sbjct: 534 VYTRPQGG 541
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 306 PRPNDGTG 313
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 326 PRPNDGAG 333
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 307 PRPNDGTG 314
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 307 PRPNDGTG 314
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 306 PRPNDGTG 313
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 298 PRPNDGTG 305
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 306 PRPNDGTG 313
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 306 PRPNDGTG 313
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 306 PRPNDGTG 313
>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 VFPRPPGGLG 10
++ RPP G G
Sbjct: 48 LYARPPEGHG 57
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 3 PRPPGGLG 10
PRP G G
Sbjct: 306 PRPNDGTG 313
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 PRPPG 7
PRPPG
Sbjct: 2614 PRPPG 2618
>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 VFPRPPGGLG 10
++ RPP G G
Sbjct: 48 LYARPPEGHG 57
>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 VFPRPPGGLG 10
++ RPP G G
Sbjct: 48 LYARPPEGHG 57
21|SequenceR|110|101|PLLLVVFPRP
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 2 LLLVVFP 8
L+LVVFP
Sbjct: 422 LMLVVFP 428
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 PLLLVVFPRP 10
PL++ F RP
Sbjct: 642 PLIVKFFERP 651
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 LLLVVFP 8
L+L+VFP
Sbjct: 422 LMLIVFP 428
22|SequenceR|115|106|GPSALPLLLV
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 GPSALP 6
GPS LP
Sbjct: 128 GPSTLP 133
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 GPSALPLL 8
GP A PLL
Sbjct: 63 GPPASPLL 70
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 430 PAAMPHLLV 438
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 430 PAAMPHLLV 438
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 440 PAAMPHLLV 448
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 430 PAAMPHLLV 438
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 440 PAAMPHLLV 448
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 440 PAAMPHLLV 448
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 440 PAAMPHLLV 448
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 430 PAAMPHLLV 438
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 430 PAAMPHLLV 438
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 430 PAAMPHLLV 438
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 430 PAAMPHLLV 438
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 436 PAAMPHLLV 444
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 440 PAAMPHLLV 448
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 440 PAAMPHLLV 448
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 PSALPLLLV 10
P+A+P LLV
Sbjct: 441 PAAMPHLLV 449
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 PSALPLLLV 10
P+A+P LL+
Sbjct: 443 PAAMPHLLI 451
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 PSALPLLLV 10
P+A+P LL+
Sbjct: 443 PAAMPHLLI 451
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 PSALPLLLV 10
P+A+P LL+
Sbjct: 443 PAAMPHLLI 451
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 PSALPLLLV 10
P+A+P LL+
Sbjct: 443 PAAMPHLLI 451
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 PSALPLLLV 10
P+A+P LL+
Sbjct: 436 PAAMPHLLI 444
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 PSALPLLLV 10
P+A+P LL+
Sbjct: 443 PAAMPHLLI 451
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 PSALPLLLV 10
P+A+P LL+
Sbjct: 436 PAAMPHLLI 444
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 PSALPLLLV 10
P+A+P LL+
Sbjct: 443 PAAMPHLLI 451
23|SequenceR|120|111|AAPPAGPSAL
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 PPAGPSA 9
PP GPSA
Sbjct: 695 PPEGPSA 701
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 PPAGPSA 9
PP GPSA
Sbjct: 695 PPEGPSA 701
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 PPAGPSA 9
PP GPS+
Sbjct: 694 PPEGPSS 700
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 PPAGPSA 9
PP GPS+
Sbjct: 694 PPEGPSS 700
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 PPAGPSA 9
PP GPS+
Sbjct: 694 PPEGPSS 700
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 PPAGPSA 9
PP GPS+
Sbjct: 694 PPEGPSS 700
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 PPAGPSAL 10
PP G SAL
Sbjct: 15 PPGGASAL 22
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 APPAGPSA 9
APP GPSA
Sbjct: 56 APPEGPSA 63
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 APPAGPSA 9
APP GPSA
Sbjct: 56 APPEGPSA 63
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 AAPPAGPSAL 10
PPAG SAL
Sbjct: 522 VTPPAGTSAL 531
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 PPAGPSAL 10
PPAGP A+
Sbjct: 564 PPAGPGAI 571
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 3 PPAGPSA 9
PPA P A
Sbjct: 212 PPASPDA 218
>sp|X_HBVB8|PROTEIN X|Hepatitis B virus genotype B1
Query: 1 AAPPAGPSAL 10
A PPA PSA+
Sbjct: 36 ALPPASPSAV 45
>sp|X_HBVB1|PROTEIN X|Hepatitis B virus genotype B1
Query: 1 AAPPAGPSAL 10
A PPA PSA+
Sbjct: 36 ALPPASPSAV 45
>sp|NP03_VZVO|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Oka
Query: 3 PPAGPSAL 10
PP+ P+AL
Sbjct: 6 PPSVPTAL 13
>sp|NP03_VZVD|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 PPAGPSAL 10
PP+ P+AL
Sbjct: 6 PPSVPTAL 13
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 AAPPAG 6
AAPP+G
Sbjct: 125 AAPPSG 130
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 PPAGPSAL 10
PPAG SAL
Sbjct: 523 PPAGTSAL 530
Query: 1 AAPPAGPSA 9
APP GP A
Sbjct: 55 GAPPEGPPA 63
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 PPAGP 7
PP GP
Sbjct: 716 PPGGP 720
>sp|X_HBVF1|PROTEIN X|Hepatitis B virus genotype F2
Query: 1 AAPPAGPSAL 10
A PP+ PSA+
Sbjct: 36 AVPPSSPSAV 45
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 4 PAGPSAL 10
P+GP AL
Sbjct: 829 PSGPKAL 835
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 PPAGP 7
PP GP
Sbjct: 716 PPGGP 720
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 APPAGPSA 9
APP GP A
Sbjct: 56 APPEGPPA 63
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 PPAGP 7
PP GP
Sbjct: 717 PPGGP 721
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 PPAGP 7
PP GP
Sbjct: 716 PPGGP 720
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 PPAGP 7
PP GP
Sbjct: 717 PPGGP 721
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 PPAGP 7
PP GP
Sbjct: 717 PPGGP 721
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 AAPPAGPSAL 10
A+PPA P+AL
Sbjct: 2306 ASPPAPPNAL 2315
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 PPAGP 7
PP GP
Sbjct: 717 PPGGP 721
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 PPAGP 7
PP GP
Sbjct: 715 PPGGP 719
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 PPAGP 7
PP GP
Sbjct: 716 PPGGP 720
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 PPAGP 7
PP GP
Sbjct: 720 PPGGP 724
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 PPAGP 7
PP GP
Sbjct: 717 PPGGP 721
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 PPAGP 7
PP GP
Sbjct: 715 PPGGP 719
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 PPAGP 7
PP GP
Sbjct: 716 PPGGP 720
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 PPAGP 7
PP GP
Sbjct: 714 PPGGP 718
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 PPAGP 7
PP GP
Sbjct: 715 PPGGP 719
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 PPAGP 7
PP GP
Sbjct: 715 PPGGP 719
24|SequenceR|125|116|SARTPAAPPA
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 3 RTPAAPP 9
RTP PP
Sbjct: 269 RTPGGPP 275
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 RTPAAPP 9
++P+APP
Sbjct: 1704 KSPSAPP 1710
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 4 TPAAPP 9
TP+APP
Sbjct: 21 TPSAPP 26
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SARTPAAPPA 10
S PAAPP+
Sbjct: 120 STSRPAAPPS 129
>sp|GL_HHV1K|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain KOS)
Query: 1 SARTPAAPP 9
S RTP PP
Sbjct: 173 SGRTPVLPP 181
>sp|GL_HHV11|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain 17)
Query: 1 SARTPAAPP 9
S RTP PP
Sbjct: 173 SGRTPVLPP 181
>sp|PHOSP_ABLVH|PHOSPHOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 1 SARTPAAPPA 10
+A+T + PPA
Sbjct: 174 AAKTASGPPA 183
>sp|B2_HHV6Z|PROTEIN B2|Human herpesvirus 6B (strain Z29)
Query: 1 SARTPAAPPA 10
S R+PA PP+
Sbjct: 13 SKRSPARPPS 22
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 TPAAPPA 10
TP+APPA
Sbjct: 472 TPSAPPA 478
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 TPAAPPA 10
TP+APPA
Sbjct: 472 TPSAPPA 478
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 4 TPAAPP 9
TPAAPP
Sbjct: 29 TPAAPP 34
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 4 TPAAPP 9
TPAAPP
Sbjct: 29 TPAAPP 34
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SARTPAAPPA 10
S PAAPP+
Sbjct: 120 STSRPAAPPS 129
>sp|NEF_HV193|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 RTPAAPPA 10
RTP PPA
Sbjct: 22 RTPPTPPA 29
>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)
Query: 4 TPAAPP 9
TPAAPP
Sbjct: 31 TPAAPP 36
>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)
Query: 4 TPAAPP 9
TPAAPP
Sbjct: 31 TPAAPP 36
>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 TPAAPP 9
TPAAPP
Sbjct: 542 TPAAPP 547
>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 TPAAPP 9
TPAAPP
Sbjct: 542 TPAAPP 547
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 1 SARTPAAPPA 10
SA+ P +PPA
Sbjct: 250 SAQAPTSPPA 259
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 5 PAAPPA 10
PAAPPA
Sbjct: 1679 PAAPPA 1684
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SARTPAAPPA 10
S P APP+
Sbjct: 120 STSRPTAPPS 129
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 3 RTPAAPP 9
RT APP
Sbjct: 235 RTGTAPP 241
>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 RTPAAPPA 10
+TP APPA
Sbjct: 18 QTPPAPPA 25
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 2 ARTPAAPP 9
R P APP
Sbjct: 694 VRVPVAPP 701
Query: 3 RTPAAPPA 10
+TPA PP
Sbjct: 141 KTPALPPV 148
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SARTPAAPPA 10
S P APP+
Sbjct: 120 STSRPTAPPS 129
25|SequenceR|130|121|RAGLPSARTP
>sp|NEF_HV1AN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 RAGLPSARTP 10
R G+PS+ TP
Sbjct: 46 RGGIPSSHTP 55
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 GLPSARTP 10
GLPS TP
Sbjct: 1706 GLPSIHTP 1713
>sp|U23_HHV6Z|PROTEIN U23|Human herpesvirus 6B (strain Z29)
Query: 3 GLPSARTP 10
GLP+ TP
Sbjct: 204 GLPTKSTP 211
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 GLPSARTP 10
GLP+ TP
Sbjct: 1710 GLPTIHTP 1717
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 GLPSARTP 10
GLP+ TP
Sbjct: 1710 GLPTIHTP 1717
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 AGLPSARTP 10
AGLP TP
Sbjct: 1735 AGLPVINTP 1743
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 GLPSARTP 10
GLP+ TP
Sbjct: 331 GLPTMNTP 338
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 GLPSARTP 10
GLP+ TP
Sbjct: 331 GLPTMNTP 338
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 GLPSARTP 10
GLP+ TP
Sbjct: 331 GLPTMNTP 338
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 GLPSARTP 10
GLP+ TP
Sbjct: 331 GLPTMNTP 338
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 GLPSARTP 10
GLP+ TP
Sbjct: 331 GLPTMNTP 338
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 GLPSARTP 10
GLP+ TP
Sbjct: 333 GLPTMNTP 340
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 GLPSARTP 10
GLP+ TP
Sbjct: 331 GLPTMNTP 338
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 GLPSARTP 10
GLP+ TP
Sbjct: 333 GLPTMNTP 340
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 GLPSARTP 10
GLP+ TP
Sbjct: 342 GLPTMNTP 349
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 1 RAGLPSART 9
+AGL +ART
Sbjct: 481 QAGLQTART 489
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 AGLPSARTP 10
GLP R P
Sbjct: 198 GGLPGIRPP 206
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 3 GLPSARTP 10
LPSA TP
Sbjct: 170 ALPSATTP 177
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 GLPSARTP 10
GLP TP
Sbjct: 1706 GLPQINTP 1713
>sp|NEF_HV1MV|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 RAGLPSARTP 10
R G+ S+ TP
Sbjct: 45 RGGISSSHTP 54
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 3 GLPSARTP 10
G+PS +TP
Sbjct: 79 GVPSTQTP 86
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 3 GLPSARTP 10
G+PS +TP
Sbjct: 79 GVPSTQTP 86
26|SequenceR|135|126|RPPSARAGLP
>sp|VP30_EBOSU|TRANSCRIPTIONAL activator VP30|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 PPSARAGLP 10
PPS GLP
Sbjct: 266 PPSVNEGLP 274
>sp|M1_I68A5|MATRIX protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 2 PPSARAGL 9
PPS+ AGL
Sbjct: 222 PPSSSAGL 229
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RPPSARAGLP 10
R PS GLP
Sbjct: 658 RTPSPSWGLP 667
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 2 PPSARAG 8
PPSAR+G
Sbjct: 454 PPSARSG 460
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 3 PSARAGL 9
PS +AGL
Sbjct: 284 PSGKAGL 290
>sp|VP2_SVSAP|MINOR capsid protein VP2|Sapporo virus (isolate
Query: 2 PPSARAGLP 10
PP+A++G P
Sbjct: 139 PPTAKSGRP 147
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PPSARAG 8
PPS R G
Sbjct: 127 PPSGRGG 133
27|SequenceR|140|131|LSVGSRPPSA
>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16
Query: 1 LSVGSRPPSA 10
+ +G+RPP+A
Sbjct: 73 IPLGTRPPTA 82
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 LSVGSRP 7
LSV SRP
Sbjct: 1265 LSVSSRP 1271
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 5 SRPPSA 10
S+PPSA
Sbjct: 488 SKPPSA 493
>sp|VP2_SVM10|MINOR capsid protein VP2|Sapporo virus (isolate
Query: 1 LSVGSRPPS 9
L +G RPPS
Sbjct: 155 LKLGPRPPS 163
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 5 SRPPSA 10
SRPPSA
Sbjct: 1003 SRPPSA 1008
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 5 SRPPSA 10
SRPPSA
Sbjct: 1003 SRPPSA 1008
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 VGSRPPSA 10
VG+ PP+A
Sbjct: 885 VGAEPPAA 892
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 2 SVGSRP 7
+VGSRP
Sbjct: 232 NVGSRP 237
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 2 SVGSRP 7
+VGSRP
Sbjct: 232 NVGSRP 237
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 2 SVGSRP 7
+VGSRP
Sbjct: 232 NVGSRP 237
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 2 SVGSRP 7
+VGSRP
Sbjct: 232 NVGSRP 237
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 2 SVGSRP 7
+VGSRP
Sbjct: 233 NVGSRP 238
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 2 SVGSRP 7
+VGSRP
Sbjct: 232 NVGSRP 237
>sp|VP6_ROTJ1|INTERMEDIATE capsid protein VP6|Rotavirus X (strain
Query: 1 LSVGSRPPS 9
LS+G++PP+
Sbjct: 229 LSLGNQPPN 237
>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62
Query: 1 LSVGSRPPS 9
+ +G RPPS
Sbjct: 71 IPIGGRPPS 79
>sp|VP6_ROTB2|INTERMEDIATE capsid protein VP6|Rotavirus X (isolate
Query: 1 LSVGSRPPS 9
LS+G++PP+
Sbjct: 229 LSLGNQPPN 237
>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61
Query: 3 VGSRPPS 9
+G+RPP+
Sbjct: 71 IGTRPPT 77
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 5 SRPPSA 10
SRPP+A
Sbjct: 642 SRPPNA 647
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 5 SRPPSA 10
SRPP+A
Sbjct: 642 SRPPNA 647
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 LSVGSRPPS 9
LS+ S+PP
Sbjct: 134 LSIKSKPPK 142
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 VGSRPPS 9
VGS PPS
Sbjct: 2409 VGSAPPS 2415
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 5 SRPPSA 10
SRPPSA
Sbjct: 751 SRPPSA 756
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 VGSRPP 8
+G RPP
Sbjct: 2402 IGERPP 2407
>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 LSVGSRPP 8
LS+ S+PP
Sbjct: 134 LSIKSKPP 141
>sp|VL2_HPV32|MINOR capsid protein L2|Human papillomavirus type 32
Query: 3 VGSRPP 8
+G+RPP
Sbjct: 74 IGTRPP 79
28|SequenceR|145|136|PAPRALSVGS
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PAPRALSVGS 10
P P+ LS+G+
Sbjct: 78 PNPQELSLGN 87
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 2 APRALSVG 9
APR+LS+G
Sbjct: 219 APRSLSLG 226
>sp|UL136_HCMVM|PROTEIN UL136|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PAPRALS 7
PAP ALS
Sbjct: 166 PAPPALS 172
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 1 PAPRALSVG 9
P PR SVG
Sbjct: 250 PLPRNQSVG 258
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 3 PRALSVGS 10
PR +SVGS
Sbjct: 372 PRRVSVGS 379
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 3 PRALSVGS 10
PR +SVGS
Sbjct: 372 PRRVSVGS 379
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 1 PAPRALSVG 9
P PR SVG
Sbjct: 250 PLPRNQSVG 258
>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PAPRALSVGS 10
PAP A VG+
Sbjct: 20 PAPAADGVGA 29
29|SequenceR|150|141|PRPCGPAPRA
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PRPCGPAPRA 10
PRPCG P A
Sbjct: 491 PRPCGIVPAA 500
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PRPCGPAP 8
P PCG P
Sbjct: 146 PPPCGTVP 153
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PRPCGPAP 8
P PCG P
Sbjct: 140 PPPCGTVP 147
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 RPCGPAPRA 10
RPCGP A
Sbjct: 419 RPCGPQSAA 427
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 RPCGPAPRA 10
RPCGP A
Sbjct: 419 RPCGPQSAA 427
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 RPCGPAPRA 10
RPCGP A
Sbjct: 420 RPCGPQSAA 428
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PRPCGPAP 8
PRPCG P
Sbjct: 491 PRPCGVVP 498
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 3 PCGPAPR 9
PC P PR
Sbjct: 236 PCTPPPR 242
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PRPCGPAP 8
PRPCG P
Sbjct: 493 PRPCGIVP 500
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 PRPCGPAP 8
PRPCG P
Sbjct: 492 PRPCGIVP 499
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 PRPCGPAP 8
PRPCG P
Sbjct: 493 PRPCGIVP 500
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PRPCGPAP 8
PRPCG P
Sbjct: 491 PRPCGIVP 498
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PRPCGPAP 8
PRPCG P
Sbjct: 492 PRPCGVVP 499
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 PRPCGPAP 8
PRPCG P
Sbjct: 493 PRPCGIVP 500
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 PRPCGPAP 8
PRPCG P
Sbjct: 491 PRPCGIVP 498
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PRPCGPAP 8
PRPCG P
Sbjct: 491 PRPCGIVP 498
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PRPCGPAP 8
PRPCG P
Sbjct: 491 PRPCGIVP 498
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PRPCGPAP 8
PRPCG P
Sbjct: 491 PRPCGIVP 498
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 PRPCGPAP 8
PRPCG P
Sbjct: 492 PRPCGIVP 499
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PRPCGPAP 8
PRPCG P
Sbjct: 492 PRPCGIVP 499
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PCGPAP 8
PC P+P
Sbjct: 439 PCTPSP 444
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PCGPAP 8
PCGP P
Sbjct: 446 PCGPNP 451
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 1 PRPCGPAP 8
PRPCG P
Sbjct: 492 PRPCGTIP 499
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 1 PRPCGPAP 8
PRPCG P
Sbjct: 492 PRPCGTIP 499
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 2 RPCGPAPR 9
RP GP+PR
Sbjct: 45 RPSGPSPR 52
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 2 RPCGPAP 8
+PC PAP
Sbjct: 176 KPCDPAP 182
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 PRPCGPAPRA 10
PRP GPA A
Sbjct: 2602 PRPIGPAATA 2611
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 3 PCGP 6
PCGP
Sbjct: 271 PCGP 274
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 PCGP 6
PCGP
Sbjct: 271 PCGP 274
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 PCGP 6
PCGP
Sbjct: 271 PCGP 274
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PRPCGPAP 8
P+PCG P
Sbjct: 493 PKPCGIVP 500
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PRPCGPAP 8
P+PCG P
Sbjct: 491 PKPCGIVP 498
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 PRPCGPAP 8
P+PCG P
Sbjct: 493 PKPCGVVP 500
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PRPCGPAP 8
P+PCG P
Sbjct: 491 PKPCGIVP 498
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPCGPAP 8
P P GP P
Sbjct: 219 PAPVGPLP 226
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 PRPCGPAP 8
P+PCG P
Sbjct: 493 PKPCGIVP 500
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 PRPCGPAP 8
P+PCG P
Sbjct: 491 PKPCGIVP 498
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 PRPCG 5
PRPCG
Sbjct: 492 PRPCG 496
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 PRPCGPAP 8
PRP PAP
Sbjct: 488 PRPLDPAP 495
>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)
Query: 3 PCGPA 7
PCGP
Sbjct: 152 PCGPG 156
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 PRPCGPAPR 9
PR G APR
Sbjct: 365 PRTFGSAPR 373
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 PRPCGPAPRA 10
P P GPA RA
Sbjct: 773 PIPAGPADRA 782
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 PRPCGPAPR 9
PR G APR
Sbjct: 363 PRTFGSAPR 371
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 PCGPAPRA 10
P GP P A
Sbjct: 717 PGGPIPHA 724
>sp|UL81_HCMVA|UNCHARACTERIZED protein UL81|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CGPAPR 9
CGP PR
Sbjct: 31 CGPCPR 36
>sp|VE8E2_HPV54|PROTEIN E8^E2C|Human papillomavirus type 54
Query: 3 PCGPAPR 9
PC P PR
Sbjct: 44 PCTPPPR 50
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 1 PRPCGPAP 8
PR GPAP
Sbjct: 561 PRVWGPAP 568
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 2 RPCGPAP 8
PCGP P
Sbjct: 195 NPCGPEP 201
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PRPCGPAP 8
PR CG P
Sbjct: 491 PRQCGIVP 498
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 2 RPCGPAP 8
PCGP P
Sbjct: 195 NPCGPEP 201
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 RPCGPAP 8
PCGP P
Sbjct: 195 NPCGPEP 201
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 2 RPCGPAP 8
PCGP P
Sbjct: 195 NPCGPEP 201
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 2 RPCGPAP 8
PCGP P
Sbjct: 195 NPCGPEP 201
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 2 RPCGPAP 8
PCGP P
Sbjct: 195 NPCGPEP 201
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 2 RPCGPAP 8
PCGP P
Sbjct: 195 NPCGPEP 201
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 2 RPCGPAP 8
PCGP P
Sbjct: 195 NPCGPEP 201
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 2 RPCGPAP 8
PCGP P
Sbjct: 195 NPCGPEP 201
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 1 PRPCGPAP 8
PR GPAP
Sbjct: 560 PRGWGPAP 567
30|SequenceR|155|146|VPECAPRPCG
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 2 PECAPRPC 9
P+ AP PC
Sbjct: 126 PKTAPNPC 133
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 2 PECAPRPC 9
P+ AP PC
Sbjct: 126 PKGAPNPC 133
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 5 APRPCG 10
APRPCG
Sbjct: 491 APRPCG 496
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 APRPCG 10
APRPCG
Sbjct: 490 APRPCG 495
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 APRPCG 10
APRPCG
Sbjct: 490 APRPCG 495
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 APRPCG 10
APRPCG
Sbjct: 490 APRPCG 495
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 APRPCG 10
APRPCG
Sbjct: 490 APRPCG 495
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 APRPCG 10
APRPCG
Sbjct: 490 APRPCG 495
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 5 APRPCG 10
APRPCG
Sbjct: 490 APRPCG 495
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 5 APRPCG 10
APRPCG
Sbjct: 491 APRPCG 496
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 5 APRPCG 10
APRPCG
Sbjct: 491 APRPCG 496
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 VPECAPRP 8
VPE A RP
Sbjct: 226 VPEIATRP 233
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 VPECAPRP 8
VPE A RP
Sbjct: 226 VPEIATRP 233
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 1 VPECAPRP 8
VPE A RP
Sbjct: 226 VPEIATRP 233
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 PECAPRP 8
P C P+P
Sbjct: 684 PPCIPKP 690
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 5 APRPCG 10
APRPCG
Sbjct: 491 APRPCG 496
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 5 APRPCG 10
APRPCG
Sbjct: 491 APRPCG 496
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VPECAPRPC 9
VP C P C
Sbjct: 1218 VPRCEPVVC 1226
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 1 VPECAPRP 8
+PE A RP
Sbjct: 224 IPEIAARP 231
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 ECAPRPCG 10
+CAPRP G
Sbjct: 2611 QCAPRPPG 2618
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 VPECAPRP 8
+PE A RP
Sbjct: 224 IPEIATRP 231
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 1 VPECAPRP 8
+PE A RP
Sbjct: 226 IPEIATRP 233
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 1 VPECAPRP 8
VP PRP
Sbjct: 223 VPNPGPRP 230
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 1 VPECAPRP 8
VP PRP
Sbjct: 223 VPNPGPRP 230
>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 ECAPRPC 9
+ PRPC
Sbjct: 290 QTVPRPC 296
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 APRPCG 10
AP+PCG
Sbjct: 490 APKPCG 495
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 6 PRPCG 10
PRPCG
Sbjct: 493 PRPCG 497
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 6 PRPCG 10
PRPCG
Sbjct: 493 PRPCG 497
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ECAPR 7
EC+PR
Sbjct: 464 ECSPR 468
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ECAPR 7
EC+PR
Sbjct: 233 ECSPR 237
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ECAPR 7
EC+PR
Sbjct: 464 ECSPR 468
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 6 PRPCG 10
PRPCG
Sbjct: 493 PRPCG 497
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ECAPR 7
EC+PR
Sbjct: 464 ECSPR 468
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ECAPR 7
EC+PR
Sbjct: 464 ECSPR 468
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 ECAPR 7
EC+PR
Sbjct: 464 ECSPR 468
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ECAPR 7
EC+PR
Sbjct: 464 ECSPR 468
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ECAPR 7
EC+PR
Sbjct: 464 ECSPR 468
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 ECAPR 7
EC+PR
Sbjct: 462 ECSPR 466
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 ECAPR 7
EC+PR
Sbjct: 462 ECSPR 466
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 6 PRPCG 10
PRPCG
Sbjct: 491 PRPCG 495
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 6 PRPCG 10
PRPCG
Sbjct: 492 PRPCG 496
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 ECAPRPC 9
+ PRPC
Sbjct: 290 QTVPRPC 296
>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 ECAPRPC 9
+ PRPC
Sbjct: 290 QTVPRPC 296
>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 ECAPRPC 9
+ PRPC
Sbjct: 290 QTVPRPC 296
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 6 PRPCG 10
PRPCG
Sbjct: 492 PRPCG 496
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 ECAPR 7
EC+PR
Sbjct: 462 ECSPR 466
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 ECAPR 7
EC+PR
Sbjct: 462 ECSPR 466
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 ECAPR 7
EC+PR
Sbjct: 462 ECSPR 466
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 ECAPRPC 9
+ APRPC
Sbjct: 127 DYAPRPC 133
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 3 ECAPRPC 9
+ APRPC
Sbjct: 127 DYAPRPC 133
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ECAPR 7
EC+PR
Sbjct: 364 ECSPR 368
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ECAPR 7
EC+PR
Sbjct: 184 ECSPR 188
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ECAPR 7
EC+PR
Sbjct: 464 ECSPR 468
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 CAPRPCG 10
C P P G
Sbjct: 447 CGPNPAG 453
>sp|VEGFH_ORFN2|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ2) (OV
Query: 3 ECAPRP 8
EC PRP
Sbjct: 35 ECKPRP 40
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 5 APRPC 9
APRPC
Sbjct: 491 APRPC 495
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 5 APRPC 9
APRPC
Sbjct: 490 APRPC 494
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 5 APRPC 9
APRPC
Sbjct: 491 APRPC 495
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 5 APRPC 9
APRPC
Sbjct: 491 APRPC 495
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 4 CAPRPCG 10
C+P CG
Sbjct: 1392 CSPLVCG 1398
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 CAPRPCG 10
C+P CG
Sbjct: 1392 CSPLVCG 1398
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 CAPRPCG 10
C+P CG
Sbjct: 1392 CSPLVCG 1398
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 3 ECAPRPCG 10
+ APRP G
Sbjct: 2599 QYAPRPIG 2606
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 CAPRPCG 10
C+P CG
Sbjct: 1392 CSPLVCG 1398
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 ECAPRPCG 10
+C P CG
Sbjct: 1386 KCCPLVCG 1393
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 ECAPRPCG 10
+C P CG
Sbjct: 1412 KCCPLVCG 1419
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 APRPCG 10
APR CG
Sbjct: 490 APRQCG 495
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 ECAPRPCG 10
+C P CG
Sbjct: 1379 KCCPLVCG 1386
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 ECAPRPCG 10
+C P CG
Sbjct: 1404 KCCPLVCG 1411
>sp|X_HBVA2|PROTEIN X|Hepatitis B virus genotype A2
Query: 4 CAPRPCG 10
CAP PC
Sbjct: 143 CAPAPCN 149
>sp|X_HBVE3|PROTEIN X|Hepatitis B virus genotype E
Query: 4 CAPRPCG 10
CAP PC
Sbjct: 143 CAPAPCN 149
>sp|X_HBVE1|PROTEIN X|Hepatitis B virus genotype E
Query: 4 CAPRPCG 10
CAP PC
Sbjct: 143 CAPAPCN 149
>sp|X_HBVD7|PROTEIN X|Hepatitis B virus genotype D
Query: 4 CAPRPCG 10
CAP PC
Sbjct: 143 CAPAPCN 149
>sp|X_HBVD2|PROTEIN X|Hepatitis B virus genotype D
Query: 4 CAPRPCG 10
CAP PC
Sbjct: 143 CAPAPCN 149
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 CAPRPCG 10
C+P CG
Sbjct: 1392 CSPLVCG 1398
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 ECAPRP 8
+CAP+P
Sbjct: 2073 QCAPKP 2078
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 ECAPRPCG 10
+C P CG
Sbjct: 1379 KCCPLVCG 1386
31|SequenceR|160|151|TLPGYVPECA
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 TLPGYVPEC 9
TLP + PEC
Sbjct: 394 TLPVWTPEC 402
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 3 PGYVPE 8
PGY PE
Sbjct: 2096 PGYFPE 2101
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 3 PGYVPE 8
PGY PE
Sbjct: 2104 PGYFPE 2109
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 3 PGYVPE 8
PGY PE
Sbjct: 2095 PGYFPE 2100
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 TLPGYVPECA 10
TLP VPE +
Sbjct: 654 TLPDIVPEAS 663
>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain JI)
Query: 2 LPGYVPE 8
LP Y+PE
Sbjct: 241 LPCYIPE 247
>sp|DUT_HHV6G|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 2 LPGYVPE 8
LP Y+PE
Sbjct: 235 LPCYIPE 241
>sp|DUT_HHV6U|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 2 LPGYVPE 8
LP Y+PE
Sbjct: 235 LPCYIPE 241
>sp|DUT_HHV6Z|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6B (strain
Query: 2 LPGYVPE 8
LP Y+PE
Sbjct: 235 LPCYIPE 241
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 4 GYVPEC 9
GY+P C
Sbjct: 900 GYIPTC 905
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 3 PGYVPEC 9
PG+ P C
Sbjct: 297 PGFTPVC 303
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 TLPGYVP 7
++P YVP
Sbjct: 822 SIPAYVP 828
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 TLPGYVP 7
++P YVP
Sbjct: 815 SIPAYVP 821
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 5 YVPECA 10
Y P+CA
Sbjct: 888 YAPDCA 893
>sp|Y190_ADE07|UNCHARACTERIZED 19.0 kDa early protein|Human adenovirus B serotype 7
Query: 2 LPGYVPECA 10
LP +P CA
Sbjct: 82 LPSLIPRCA 90
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LPGYVPEC 9
L GY P C
Sbjct: 270 LAGYTPVC 277
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LPGYVPECA 10
LP Y+ EC
Sbjct: 205 LPPYLYECG 213
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 GYVPECA 10
G++P+C+
Sbjct: 243 GFMPKCS 249
>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)
Query: 2 LPGYVPECA 10
LP Y+ EC
Sbjct: 205 LPPYLYECG 213
>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant
Query: 2 LPGYVPECA 10
LP Y+ EC
Sbjct: 205 LPPYLYECG 213
>sp|3BHS_VAR67|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Variola
Query: 4 GYVPECA 10
GY P C+
Sbjct: 131 GYSPSCS 137
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LPGYVPEC 9
L GY P C
Sbjct: 140 LGGYCPTC 147
>sp|ICP47_HHV11|ICP47 protein|Human herpesvirus 1 (strain 17)
Query: 3 PGYVPECA 10
PG +PE A
Sbjct: 55 PGLLPEIA 62
32|SequenceR|165|156|PKLSMTLPGY
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PKLSMTLPG 9
P+LS+TLPG
Sbjct: 438 PRLSVTLPG 446
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PKLSMTLPG 9
P+LS+TLPG
Sbjct: 438 PRLSVTLPG 446
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PKLSMTLPG 9
P+LS+TLPG
Sbjct: 438 PRLSVTLPG 446
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 PKLSMTLPGY 10
P L++T PG+
Sbjct: 197 PNLALTQPGH 206
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 KLSMTLPGY 10
KL +TL GY
Sbjct: 5998 KLDLTLDGY 6006
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 KLSMTLPGY 10
KL +TL GY
Sbjct: 6018 KLDLTLDGY 6026
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 KLSMTLPGY 10
KL +TL GY
Sbjct: 6048 KLDLTLDGY 6056
>sp|CEP1_HHV7J|CYTOPLASMIC envelopment protein 1|Human herpesvirus 7 (strain JI)
Query: 2 KLSMTLP 8
K+S+TLP
Sbjct: 144 KISVTLP 150
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PKLSMTLPG 9
PK++ +PG
Sbjct: 165 PKIATLIPG 173
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 PKLSMTLPG 9
PK++ +PG
Sbjct: 165 PKIATLIPG 173
>sp|NCAP_CVHNL|NUCLEOPROTEIN coronavirus NL63 (HCoV-NL63)
Query: 1 PKLSMTLP 8
PK S+ LP
Sbjct: 125 PKFSIALP 132
>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45
Query: 1 PKLSMTLPG 9
PK S+T+P
Sbjct: 371 PKYSLTMPS 379
33|SequenceR|170|161|QQQQQPKLSM
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 QQQQQPKL 8
+QQQ P L
Sbjct: 380 EQQQPPSL 387
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QQQQQPKL 8
+QQQ P L
Sbjct: 380 EQQQPPSL 387
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QQQQQPKL 8
+QQQ P L
Sbjct: 380 EQQQPPSL 387
>sp|VP30_EBOZM|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 QQQQQPKLSM 10
QQ++ PK+++
Sbjct: 135 QQEEGPKITL 144
>sp|VP30_EBOZ5|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 QQQQQPKLSM 10
QQ++ PK+++
Sbjct: 135 QQEEGPKITL 144
34|SequenceR|175|166|QQQQQQQQQQ
***** No hits found ******
35|SequenceR|180|171|QQQQQQQQQQ
***** No hits found ******
36|SequenceR|185|176|QQQQQQQQQQ
***** No hits found ******
37|SequenceR|190|181|PPQQQQQQQQ
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 2 PQQQQQQ 8
PQ Q+QQ
Sbjct: 126 PQNQEQQ 132
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 1 PPQQQQQQ 8
PP ++QQ
Sbjct: 198 PPNSKEQQ 205
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 2 PQQQQQQQQ 10
PQQ + +QQ
Sbjct: 802 PQQLEHEQQ 810
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 PQQQQQQQQ 10
PQQ + +QQ
Sbjct: 802 PQQLEHEQQ 810
38|SequenceR|195|186|NAAAPPPQQQ
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 AAPPPQQQ 10
A PPP+QQ
Sbjct: 68 AGPPPKQQ 75
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 286 AAAPPEQSR 294
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I01A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 286 AAAPPEQSR 294
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPKQSR 630
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 4 APPPQQ 9
+PPP+Q
Sbjct: 50 SPPPRQ 55
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 APPPQQ 9
+PPP+Q
Sbjct: 50 SPPPRQ 55
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 621 AAAPPEQSR 629
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 616 AAAPPEQSR 624
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 615 AAAPPEQSR 623
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 2 AAAPPPQQQ 10
AAAPP Q +
Sbjct: 622 AAAPPEQSR 630
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 AAAPPPQ 8
AAAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 AAPPPQQQ 10
APPP QQ
Sbjct: 275 GAPPPSQQ 282
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 AAPPPQQQ 10
APPP QQ
Sbjct: 275 GAPPPSQQ 282
>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United
Query: 4 APPPQ 8
APPP+
Sbjct: 52 APPPE 56
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 AAPPPQQQ 10
APPP QQ
Sbjct: 275 GAPPPSQQ 282
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 2 AAAPPPQQ 9
AAAPPP++
Sbjct: 433 AAAPPPKE 440
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 3 AAPPPQQQ 10
AAPP Q +
Sbjct: 615 AAPPEQSR 622
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 AAPPPQQQ 10
AAPP Q +
Sbjct: 623 AAPPEQSR 630
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 2 AAAPPPQQ 9
A PPP++
Sbjct: 134 AVLPPPEE 141
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 3 AAPPPQ 8
AAPPPQ
Sbjct: 355 AAPPPQ 360
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 2 AAAPPPQQ 9
+AAPP Q+
Sbjct: 253 SAAPPEQR 260
39|SequenceR|200|191|GPKRVNAAAP
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GPKRVNAAAP 10
GP+RV A P
Sbjct: 1913 GPERVILAGP 1922
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GPKRVNAAAP 10
GP+RV A P
Sbjct: 1911 GPERVILAGP 1920
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GPKRVNAAAP 10
GP+RV A P
Sbjct: 1912 GPERVILAGP 1921
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GPKRVNAAAP 10
GP+RV A P
Sbjct: 1911 GPERVILAGP 1920
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GPKRVNAAAP 10
GP+RV A P
Sbjct: 1911 GPERVILAGP 1920
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GPKRVNAAAP 10
GP+RV A P
Sbjct: 1913 GPERVILAGP 1922
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GPKRVNAAAP 10
GP+RV A P
Sbjct: 1911 GPERVILAGP 1920
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GPKRVNAAAP 10
GP+RV A P
Sbjct: 1911 GPERVILAGP 1920
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GPKRVNAAAP 10
GP+RV A P
Sbjct: 1911 GPERVILAGP 1920
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GPKRVNAAAP 10
GP+RV A P
Sbjct: 1911 GPERVILAGP 1920
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GPKRVNAAAP 10
GP+RV A P
Sbjct: 1911 GPERVILAGP 1920
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GPKRVNAAAP 10
GP+RV A P
Sbjct: 1911 GPERVILAGP 1920
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GPKRVNAAAP 10
GP+RV A P
Sbjct: 1911 GPERVILAGP 1920
>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)
Query: 3 KRVNAA 8
KRVNAA
Sbjct: 256 KRVNAA 261
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 KRVNAA 8
KRVNAA
Sbjct: 256 KRVNAA 261
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 2 PKRVNAAAP 10
P+R++ AP
Sbjct: 407 PRRLSTTAP 415
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 2 PKRVNAAAP 10
P+R++ AP
Sbjct: 407 PRRLSTTAP 415
40|SequenceR|205|196|LLGSGGPKRV
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 LLGSGGPKRV 10
L+G GGP+ +
Sbjct: 3531 LMGIGGPRTI 3540
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 LLGSGGPKRV 10
L+G GGP+ +
Sbjct: 3531 LMGIGGPRTI 3540
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 2 LGSGGPKR 9
LGSG P++
Sbjct: 36 LGSGAPRK 43
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 LLGSGGPKRV 10
+LGS P+RV
Sbjct: 262 MLGSNTPQRV 271
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 LLGSGGP 7
+LG+GGP
Sbjct: 486 VLGAGGP 492
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 LLGSGGP 7
+LG+GGP
Sbjct: 486 VLGAGGP 492
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 LLGSGGPK 8
+LG+G PK
Sbjct: 1172 ILGTGTPK 1179
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 5 GGPKRV 10
GGP+RV
Sbjct: 1280 GGPRRV 1285
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 5 GGPKRV 10
GGP+RV
Sbjct: 1280 GGPRRV 1285
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 5 GGPKRV 10
GGP+RV
Sbjct: 1280 GGPRRV 1285
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 5 GGPKRV 10
GGP+RV
Sbjct: 1280 GGPRRV 1285
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 5 GGPKRV 10
GGP+RV
Sbjct: 1280 GGPRRV 1285
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 5 GGPKRV 10
GGP+RV
Sbjct: 1280 GGPRRV 1285
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 5 GGPKRV 10
GGP+RV
Sbjct: 1280 GGPRRV 1285
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 5 GGPKRV 10
GGP+RV
Sbjct: 1280 GGPRRV 1285
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 5 GGPKRV 10
GGP+RV
Sbjct: 1280 GGPRRV 1285
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 LLGSGGP 7
+LG+GGP
Sbjct: 486 VLGAGGP 492
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 LLGSGGP 7
+LG+GGP
Sbjct: 486 VLGAGGP 492
>sp|B8_HHV6Z|PROTEIN B8|Human herpesvirus 6B (strain Z29)
Query: 2 LGSGGPKRV 10
LGS PKRV
Sbjct: 26 LGSFLPKRV 34
Query: 2 LGSGGPKRV 10
LGS PKRV
Sbjct: 61 LGSFLPKRV 69
Query: 2 LGSGGPKRV 10
LGS PKRV
Sbjct: 96 LGSFLPKRV 104
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 2 LGSGGP 7
LGSG P
Sbjct: 501 LGSGAP 506
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GSGGPKR 9
G GGP R
Sbjct: 1192 GGGGPDR 1198
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 GSGGPKR 9
G GGP R
Sbjct: 1193 GGGGPDR 1199
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 GSGGPKRV 10
G G P+RV
Sbjct: 11 GGGPPRRV 18
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 GSGGPKRV 10
G G P+RV
Sbjct: 11 GGGPPRRV 18
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 GSGGPKRV 10
G G P+RV
Sbjct: 11 GGGPPRRV 18
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 GSGGPKRV 10
G G P+RV
Sbjct: 11 GGGPPRRV 18
41|SequenceR|210|201|AAPSALLGSG
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 PSALLGS 9
PSA++GS
Sbjct: 2611 PSAIMGS 2617
42|SequenceR|215|206|SPSPAAAPSA
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 PSPAAAP 8
PSPA+AP
Sbjct: 19 PSPASAP 25
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 PSPAAAP 8
PSPA+AP
Sbjct: 19 PSPASAP 25
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PSPAAAPSA 10
PSPAAA A
Sbjct: 1482 PSPAAAQKA 1490
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PSPAAAPSA 10
PSPAAA A
Sbjct: 1482 PSPAAAQKA 1490
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 SPSPAAAP 8
+PSP A P
Sbjct: 223 TPSPGARP 230
>sp|MATRX_RABVP|MATRIX protein|Rabies virus (strain Pasteur vaccins
Query: 2 PSPAAAP 8
PSP +AP
Sbjct: 19 PSPVSAP 25
>sp|MATRX_RABVE|MATRIX protein|Rabies virus (strain ERA) (RABV)
Query: 2 PSPAAAP 8
PSP +AP
Sbjct: 19 PSPVSAP 25
>sp|MATRX_RABVD|MATRIX protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 PSPAAAP 8
PSP +AP
Sbjct: 19 PSPVSAP 25
>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)
Query: 2 PSPAAAP 8
PSP +AP
Sbjct: 19 PSPVSAP 25
>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 PSPAAAP 8
PSP +AP
Sbjct: 19 PSPVSAP 25
>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)
Query: 3 SPAAAP 8
SPA+AP
Sbjct: 20 SPASAP 25
>sp|MATRX_RABVR|MATRIX protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 PSPAAAP 8
PSP +AP
Sbjct: 19 PSPVSAP 25
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 SPSPAAAPS 9
SPSP PS
Sbjct: 95 SPSPDGTPS 103
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 SPSPAAAPS 9
SPSP PS
Sbjct: 95 SPSPDGTPS 103
>sp|X_HBVA9|PROTEIN X|Hepatitis B virus genotype A3
Query: 1 SPSPAAAPS 9
SPSP+A P+
Sbjct: 39 SPSPSAVPT 47
>sp|X_HBVD3|PROTEIN X|Hepatitis B virus genotype D
Query: 1 SPSPAAAPS 9
SPSP+A P+
Sbjct: 39 SPSPSAVPT 47
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SPSPAAAP 8
+P P AAP
Sbjct: 439 TPVPPAAP 446
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SPSPAAAP 8
+P P AAP
Sbjct: 439 TPVPPAAP 446
>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SPSPAAAPSA 10
SPSP++AP A
Sbjct: 253 SPSPSSAPHA 262
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PAAAPS 9
PAAAPS
Sbjct: 141 PAAAPS 146
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 1 SPSPAAAPSA 10
+PSP A P+A
Sbjct: 129 APSPTAGPAA 138
>sp|X_HBVE4|PROTEIN X|Hepatitis B virus genotype E
Query: 1 SPSPAAAPS 9
SPSP+A P+
Sbjct: 39 SPSPSAVPA 47
>sp|X_HBVE3|PROTEIN X|Hepatitis B virus genotype E
Query: 1 SPSPAAAPSA 10
SPSP+A P+
Sbjct: 39 SPSPSAVPAV 48
>sp|X_HBVA4|PROTEIN X|Hepatitis B virus genotype A2
Query: 1 SPSPAAAPS 9
SPSP+A P+
Sbjct: 39 SPSPSAVPA 47
>sp|X_HBVA3|PROTEIN X|Hepatitis B virus genotype A2
Query: 1 SPSPAAAPS 9
SPSP+A P+
Sbjct: 39 SPSPSAVPA 47
>sp|X_HBVE2|PROTEIN X|Hepatitis B virus genotype E
Query: 1 SPSPAAAPS 9
SPSP+A P+
Sbjct: 39 SPSPSAVPA 47
>sp|X_HBVE1|PROTEIN X|Hepatitis B virus genotype E
Query: 1 SPSPAAAPS 9
SPSP+A P+
Sbjct: 39 SPSPSAVPA 47
>sp|X_HBVC0|PROTEIN X|Hepatitis B virus genotype C
Query: 1 SPSPAAAPS 9
SPSP+A P+
Sbjct: 39 SPSPSAVPA 47
>sp|X_HBVA2|PROTEIN X|Hepatitis B virus genotype A2
Query: 1 SPSPAAAPS 9
SPSP+A P+
Sbjct: 39 SPSPSAVPA 47
>sp|X_HBVA7|PROTEIN X|Hepatitis B virus genotype A2
Query: 1 SPSPAAAPS 9
SPSP+A P+
Sbjct: 39 SPSPSAVPA 47
43|SequenceR|220|211|SVSSSSPSPA
>sp|NSP4_ROTGA|NON-STRUCTURAL glycoprotein 4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 SVSSSSP 7
++SSSSP
Sbjct: 34 TISSSSP 40
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VSSSSPSP 9
+ SSPSP
Sbjct: 2637 IGESSPSP 2644
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VSSSSPSP 9
+ SSPSP
Sbjct: 2637 IGESSPSP 2644
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VSSSSPSP 9
+ SSPSP
Sbjct: 2637 IGESSPSP 2644
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VSSSSPSP 9
+ SSPSP
Sbjct: 2637 IGESSPSP 2644
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 VSSSSPSP 9
+ SSPSP
Sbjct: 2638 IGESSPSP 2645
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VSSSSPSP 9
+ SSPSP
Sbjct: 2637 IGESSPSP 2644
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 VSSSSPSPA 10
+ SSPSP
Sbjct: 2668 IGESSPSPG 2676
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 2 VSSSSPSPA 10
V +S+P PA
Sbjct: 137 VPASAPGPA 145
44|SequenceR|225|216|TASSSSVSSS
***** No hits found ******
45|SequenceR|230|221|VSSPATASSS
>sp|VE5_HPV18|PROBABLE protein E5|Human papillomavirus type 18
Query: 1 VSSPATASS 9
++SPATA +
Sbjct: 43 ITSPATAFT 51
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 PATASSS 10
PAT SSS
Sbjct: 559 PATVSSS 565
46|SequenceR|235|226|STAAVVSSPA
>sp|PG137_VARV|PROTEIN OPG137|Variola virus
Query: 3 AAVVSSP 9
AAVVSSP
Sbjct: 51 AAVVSSP 57
>sp|PG137_VAR67|PROTEIN OPG137|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 AAVVSSP 9
AAVVSSP
Sbjct: 51 AAVVSSP 57
>sp|PG137_MONPV|PROTEIN OPG137|Monkeypox virus (MPXV)
Query: 3 AAVVSSP 9
AAVVSSP
Sbjct: 51 AAVVSSP 57
>sp|PG137_VACCC|PROTEIN OPG137|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 AAVVSSP 9
AAVVSSP
Sbjct: 51 AAVVSSP 57
>sp|PG137_VACCA|PROTEIN OPG137|Vaccinia virus (strain Ankara) (VACV)
Query: 3 AAVVSSP 9
AAVVSSP
Sbjct: 51 AAVVSSP 57
>sp|VP2_POVJC|MINOR capsid protein VP2|JC polyomavirus (JCPyV) (JCV)
Query: 1 STAAVVSSPA 10
+T A+V+SPA
Sbjct: 200 TTWAIVNSPA 209
47|SequenceR|240|231|PRGGGSTAAV
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RGGGST 7
RGGGST
Sbjct: 302 RGGGST 307
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RGGGST 7
RGGGST
Sbjct: 302 RGGGST 307
>sp|UL76_HCMVM|PROTEIN UL76|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PRGGGSTAAV 10
PRGGG +V
Sbjct: 144 PRGGGQVWSV 153
>sp|UL76_HCMVA|PROTEIN UL76|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PRGGGSTAAV 10
PRGGG +V
Sbjct: 144 PRGGGQVWSV 153
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 PRGGGSTAAV 10
P G G T+A+
Sbjct: 53 PMGSGKTSAL 62
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRGGGST 7
PR GG T
Sbjct: 496 PRAGGDT 502
>sp|UL92_EBVB9|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain B95-8)
Query: 1 PRGGGST 7
PRG G T
Sbjct: 10 PRGEGGT 16
>sp|UL92_EBVA8|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain AG876)
Query: 1 PRGGGST 7
PRG G T
Sbjct: 10 PRGEGGT 16
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka
Query: 1 PRGGGSTAAV 10
P G G T A+
Sbjct: 68 PMGSGKTTAL 77
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 PRGGGSTAAV 10
P G G T A+
Sbjct: 68 PMGSGKTTAL 77
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 4 GGSTAAV 10
GG TAAV
Sbjct: 1663 GGMTAAV 1669
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 PRGGGST 7
P GGG T
Sbjct: 114 PYGGGMT 120
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 1 PRGGGST 7
P GGG T
Sbjct: 115 PLGGGMT 121
48|SequenceR|245|236|GRGLGPRGGG
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 GLGPRG 8
GLGPRG
Sbjct: 434 GLGPRG 439
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 5 GPRGGG 10
GP GGG
Sbjct: 113 GPYGGG 118
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 5 GPRGGG 10
GPRG G
Sbjct: 28 GPRGAG 33
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 5 GPRGGG 10
GP GGG
Sbjct: 115 GPYGGG 120
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 5 GPRGGG 10
GP GGG
Sbjct: 114 GPLGGG 119
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 GLGPRG 8
G+GPRG
Sbjct: 434 GMGPRG 439
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 5 GPRGGG 10
GP GGG
Sbjct: 71 GPSGGG 76
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 RGLGPRG 8
+G GPRG
Sbjct: 538 QGYGPRG 544
>sp|P30II_HTL1A|ACCESSORY protein p30II|Human T-cell leukemia virus 1
Query: 1 GRGLGPRGGG 10
R + PRGG
Sbjct: 77 SRCVSPRGGA 86
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 3 GLGPRGGG 10
G GP G G
Sbjct: 932 GSGPNGDG 939
>sp|P30II_HTL1C|ACCESSORY protein p30II|Human T-cell leukemia virus 1
Query: 1 GRGLGPRGGG 10
R + PRGG
Sbjct: 77 SRCVSPRGGA 86
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 3 GLGPRG 8
G+GP G
Sbjct: 383 GIGPNG 388
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 1 GRGLGPRGG 9
GR +G GG
Sbjct: 172 GRNVGGNGG 180
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 GRGLGPRGG 9
GRG RGG
Sbjct: 710 GRGSFRRGG 718
49|SequenceR|250|241|KNSNRGRGLG
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 2 NSNRGR 7
NSN+GR
Sbjct: 282 NSNKGR 287
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 2 NSNRGR 7
NSN+GR
Sbjct: 282 NSNKGR 287
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 KNSNRGRG 8
KN N+G G
Sbjct: 125 KNGNKGAG 132
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 KNSNRGRG 8
KN N+G G
Sbjct: 125 KNGNKGAG 132
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 KNSNRGRG 8
KN N+G G
Sbjct: 125 KNGNKGAG 132
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 KNSNRGRG 8
KN N+G G
Sbjct: 125 KNGNKGAG 132
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 NSNRGRG 8
N N GRG
Sbjct: 343 NGNDGRG 349
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 NSNRGRG 8
N N GRG
Sbjct: 343 NGNDGRG 349
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 5 RGRGLG 10
RGRG G
Sbjct: 403 RGRGAG 408
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 2 NSNRGRGLG 10
N+N G+GL
Sbjct: 346 NANTGKGLA 354
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 SNRGRGL 9
SN GRG+
Sbjct: 72 SNMGRGV 78
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain
Query: 3 SNRGRGL 9
SN GRG+
Sbjct: 72 SNMGRGV 78
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 5 RGRGLG 10
RGRG G
Sbjct: 403 RGRGAG 408
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 5 RGRGLG 10
RGRG G
Sbjct: 403 RGRGAG 408
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 5 RGRGLG 10
RGRG G
Sbjct: 403 RGRGAG 408
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 5 RGRGLG 10
RGRG G
Sbjct: 403 RGRGAG 408
50|SequenceR|255|246|SQPLGKNSNR
>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)
Query: 2 QPLGKNSN 9
QPL KNSN
Sbjct: 158 QPLLKNSN 165
>sp|US30_HCMVA|UNCHARACTERIZED protein HHRF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SQPLGKNSN 9
S PLGKN+
Sbjct: 197 STPLGKNAE 205
>sp|US30_HCMVM|UNCHARACTERIZED protein US30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SQPLGKNSN 9
S PLGKN+
Sbjct: 197 STPLGKNAE 205
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 PLGKNSN 9
PL +NSN
Sbjct: 2737 PLSRNSN 2743
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 PLGKNSN 9
PL +NSN
Sbjct: 2737 PLSRNSN 2743
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 PLGKNSN 9
PL +NSN
Sbjct: 2739 PLSRNSN 2745
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 PLGKNSN 9
PL +NSN
Sbjct: 2737 PLSRNSN 2743
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 PLGKNSN 9
PL +NSN
Sbjct: 2737 PLSRNSN 2743
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 SQPLGKNS 8
S P+GKN+
Sbjct: 647 STPIGKNT 654
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 PLGKNSN 9
PL +NSN
Sbjct: 2730 PLSRNSN 2736
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 PLGKNSN 9
PL +NSN
Sbjct: 2739 PLSRNSN 2745
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 SQPLGKNSN 9
S PL +N+N
Sbjct: 633 STPLAENTN 641
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 SQPLGKNSN 9
S PL +N+N
Sbjct: 633 STPLAENTN 641
>sp|UNG_EBVB9|URACIL-DNA glycosylase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PLGKNSNR 10
PL +NS R
Sbjct: 216 PLAQNSTR 223
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 2 QPLGKN 7
QP+G+N
Sbjct: 81 QPIGEN 86
51|SequenceR|260|251|DFSITSQPLG
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 FSITSQP 8
FSITSQP
Sbjct: 250 FSITSQP 256
>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)
Query: 2 FSITSQP 8
FSITSQP
Sbjct: 250 FSITSQP 256
>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 FSITSQP 8
FSITSQP
Sbjct: 250 FSITSQP 256
>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann
Query: 2 FSITSQP 8
FSITSQP
Sbjct: 250 FSITSQP 256
>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)
Query: 2 FSITSQP 8
FSITS+P
Sbjct: 250 FSITSKP 256
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 2 FSITSQP 8
F +TSQP
Sbjct: 518 FDLTSQP 524
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 2 FSITSQP 8
F +TSQP
Sbjct: 518 FDLTSQP 524
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 2 FSITSQPLG 10
++IT+QPL
Sbjct: 13 WTITTQPLA 21
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 1 DFSITSQPLG 10
DF++TS LG
Sbjct: 333 DFTLTSPYLG 342
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 4 ITSQPLG 10
ITSQPL
Sbjct: 421 ITSQPLA 427
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 4 ITSQPLG 10
ITSQPL
Sbjct: 421 ITSQPLA 427
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 FSITSQ 7
FSITSQ
Sbjct: 96 FSITSQ 101
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 DFSITSQPLG 10
DF++TS LG
Sbjct: 324 DFTLTSPYLG 333
>sp|VME1_CVH22|MEMBRANE protein|Human coronavirus 229E (HCoV-229E)
Query: 1 DFSITSQPL 9
DFS S P+
Sbjct: 204 DFSAVSSPM 212
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 DFSITSQPLG 10
DF++TS LG
Sbjct: 333 DFTLTSPYLG 342
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 DFSITSQPLG 10
DF++TS LG
Sbjct: 333 DFTLTSPYLG 342
>sp|AP3A_SARS|ORF3A protein|Severe acute respiratory syndrome coronavirus
Query: 3 SITSQPL 9
SIT+QP+
Sbjct: 12 SITAQPV 18
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 DFSITS 6
DFS+TS
Sbjct: 676 DFSLTS 681
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 DFSITS 6
DFS+TS
Sbjct: 676 DFSLTS 681
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 DFSITS 6
DFS+TS
Sbjct: 676 DFSLTS 681
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 2 FSITSQPL 9
F +TS PL
Sbjct: 45 FPLTSSPL 52
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 DFSITSQPLG 10
D S+T +P G
Sbjct: 617 DGSLTDEPYG 626
52|SequenceR|265|256|NAYIGDFSIT
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 NAYIGDFSI 9
+AY GD +I
Sbjct: 2010 SAYTGDLTI 2018
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 3 YIGDFS 8
Y+GDF+
Sbjct: 415 YVGDFT 420
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 NAYIGDFSI 9
+AY+GD I
Sbjct: 2010 SAYVGDLLI 2018
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 NAYIGDFSI 9
+AY+GD I
Sbjct: 2010 SAYVGDLLI 2018
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 YIGDFSIT 10
+IG FSI+
Sbjct: 1518 FIGPFSIS 1525
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 YIGDFSIT 10
+IG FSI+
Sbjct: 1518 FIGPFSIS 1525
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 1 NAYIGDFSIT 10
N YI D S+T
Sbjct: 444 NEYISDESLT 453
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 YIGDFS 8
Y+GDF+
Sbjct: 6668 YLGDFA 6673
53|SequenceR|270|261|HVMRMNAYIG
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 1 HVMRMNAYIG 10
HVM + A++G
Sbjct: 452 HVMYLGAFLG 461
>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain
Query: 1 HVMRMNAYIG 10
H+M A++G
Sbjct: 315 HIMTKGAFLG 324
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 1 HVMRMNAYI 9
HV +N+Y+
Sbjct: 66 HVCHINSYL 74
54|SequenceR|275|266|VSTLIHVMRM
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 2 STLIHVMRM 10
S +IH MRM
Sbjct: 375 SRIIHSMRM 383
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 3 TLIHVMR 9
+LIHV+R
Sbjct: 443 SLIHVLR 449
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 2 STLIHVMRM 10
S ++H MRM
Sbjct: 375 SRIVHSMRM 383
>sp|PG035_MONPV|PROTEIN OPG035|Monkeypox virus (MPXV)
Query: 1 VSTLIHVMRM 10
V TLI MRM
Sbjct: 39 VCTLIKNMRM 48
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 VSTLIHVMR 9
VST+ H++R
Sbjct: 1918 VSTIEHILR 1926
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 1 VSTLIHV 7
+STL+HV
Sbjct: 288 LSTLLHV 294
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 1 VSTLIHV 7
+STL+HV
Sbjct: 287 LSTLLHV 293
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 1 VSTLIHV 7
+STL+HV
Sbjct: 291 LSTLLHV 297
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 1 VSTLIHV 7
+STL+HV
Sbjct: 301 LSTLLHV 307
>sp|PG035_VAR67|PROTEIN OPG035|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VSTLIHVMRM 10
V TLI MRM
Sbjct: 39 VCTLIKNMRM 48
>sp|PG035_VACCC|PROTEIN OPG035|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VSTLIHVMRM 10
V TLI MRM
Sbjct: 39 VCTLIKNMRM 48
55|SequenceR|280|271|CKSGVVSTLI
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 CKSGVV 6
CK GVV
Sbjct: 382 CKQGVV 387
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 CKSGVV 6
CK GVV
Sbjct: 382 CKQGVV 387
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 1 CKSGVVSTLI 10
C+ V++TL+
Sbjct: 695 CRELVINTLV 704
56|SequenceR|285|276|KVQVECKSGV
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 4 VECKSG 9
+ECKSG
Sbjct: 350 IECKSG 355
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 4 VECKSG 9
+ECKSG
Sbjct: 350 IECKSG 355
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 4 VECKSG 9
+ECK+G
Sbjct: 370 IECKAG 375
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 4 VECKSG 9
+ECK+G
Sbjct: 370 IECKAG 375
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 4 VECKSG 9
+ECK+G
Sbjct: 369 IECKAG 374
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 4 VECKSG 9
+ECK+G
Sbjct: 369 IECKAG 374
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 4 VECKSG 9
+ECK+G
Sbjct: 369 IECKAG 374
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 4 VECKSG 9
+ECK+G
Sbjct: 369 IECKAG 374
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 KVQVECKS 8
+VQV+C +
Sbjct: 248 RVQVQCNA 255
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 KVQVECKS 8
+VQV+C +
Sbjct: 248 RVQVQCNA 255
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 KVQVECKS 8
+VQV+C +
Sbjct: 248 RVQVQCNA 255
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 KVQVECKS 8
+VQV+C +
Sbjct: 248 RVQVQCNA 255
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 KVQVECKS 8
+VQV+C +
Sbjct: 248 RVQVQCNA 255
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 KVQVECKS 8
+VQV+C +
Sbjct: 246 RVQVQCNA 253
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 6 CKSGV 10
CKSGV
Sbjct: 385 CKSGV 389
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 QVECKSGV 10
+ +CK+GV
Sbjct: 924 RCQCKTGV 931
>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 VQVECKSG 9
VQV CK G
Sbjct: 232 VQVICKIG 239
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 VQVECKSG 9
VQV CK G
Sbjct: 232 VQVICKIG 239
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 VQVECKSGV 10
+ ++C SGV
Sbjct: 1525 ISLDCGSGV 1533
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 VQVECKSG 9
VQV CK G
Sbjct: 232 VQVICKIG 239
>sp|VP35_EBOZ5|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 VQVECKSG 9
VQV CK G
Sbjct: 243 VQVICKLG 250
57|SequenceR|290|281|YIGGNKVQVE
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YIGGNKVQVE 10
YIG NKV V+
Sbjct: 196 YIGSNKVNVD 205
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 1 YIGGNKVQVE 10
YI GN +VE
Sbjct: 199 YISGNGAEVE 208
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 1 YIGGNKVQVE 10
YI GN +VE
Sbjct: 198 YISGNGAEVE 207
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 1 YIGGNKVQV 9
Y GG +VQV
Sbjct: 99 YAGGFEVQV 107
>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YIGGNKVQVE 10
YI GN +E
Sbjct: 179 YISGNPYPIE 188
58|SequenceR|295|286|KFVGEYIGGN
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 2 FVGEYIGGN 10
F GE IG N
Sbjct: 213 FAGETIGDN 221
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 4 GEYIGGN 10
+YIGGN
Sbjct: 158 AKYIGGN 164
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 KFVGEYIGG 9
K+VG IGG
Sbjct: 1081 KYVGLAIGG 1089
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 KFVGEYIGG 9
K+VG IGG
Sbjct: 1081 KYVGLAIGG 1089
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 KFVGEYIGG 9
K+VG IGG
Sbjct: 1081 KYVGLAIGG 1089
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 KFVGEYIGGN 10
KF+G +G N
Sbjct: 627 KFMGGVVGSN 636
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 3 VGEYIG 8
VGE+IG
Sbjct: 74 VGEFIG 79
>sp|REV_HV1YB|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 1 KFVGEYIGG 9
+ +G Y+GG
Sbjct: 59 RILGAYLGG 67
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 FVGEYIGGN 10
F G Y GG+
Sbjct: 2971 FTGGYSGGD 2979
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 FVGEYIGGN 10
F G Y GG+
Sbjct: 2971 FTGGYSGGD 2979
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 FVGEYI 7
FVGE++
Sbjct: 486 FVGEFV 491
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 2 FVGEYI 7
FVGE++
Sbjct: 486 FVGEFV 491
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KFVGEYI 7
+FVGE++
Sbjct: 884 QFVGEHV 890
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KFVGEYI 7
+FVGE++
Sbjct: 884 QFVGEHV 890
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 KFVGEYIGGN 10
K +G +I GN
Sbjct: 1691 KILGMHIAGN 1700
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 KFVGEYIGGN 10
K +G +I GN
Sbjct: 1682 KILGMHIAGN 1691
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 KFVGEYIGGN 10
K +G +I GN
Sbjct: 1683 KILGMHIAGN 1692
>sp|VP1_POVBA|MAJOR capsid protein VP1|BK polyomavirus (strain AS) (BKPyV)
Query: 1 KFVGEYIGG 9
++ G Y GG
Sbjct: 220 RYFGTYTGG 228
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 KFVGEYIG 8
+F G Y+G
Sbjct: 446 RFYGPYLG 453
>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KFVGEYIG 8
+F G Y+G
Sbjct: 446 RFYGPYLG 453
>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KFVGEYIG 8
+F G Y+G
Sbjct: 445 RFYGPYLG 452
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 VGEYIG 8
+GEY+G
Sbjct: 1885 LGEYLG 1890
59|SequenceR|300|291|KPSYTKFVGE
>sp|VPX_HV2G1|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 PSYTKF 7
PSYTK+
Sbjct: 64 PSYTKY 69
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 PSYTKFVGE 10
PSYT +GE
Sbjct: 464 PSYTLKLGE 472
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 PSYTKFVGE 10
PSYT +GE
Sbjct: 460 PSYTLKLGE 468
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 PSYTKFVGE 10
PSYT +GE
Sbjct: 464 PSYTLKLGE 472
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 PSYTKFVGE 10
P+YT +GE
Sbjct: 459 PTYTANLGE 467
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 3 SYTKFVG 9
+YT FVG
Sbjct: 89 TYTNFVG 95
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 3 SYTKFVG 9
+YT FVG
Sbjct: 89 TYTNFVG 95
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 3 SYTKFVG 9
+YT FVG
Sbjct: 89 TYTNFVG 95
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 3 SYTKFVG 9
+YT FVG
Sbjct: 89 TYTNFVG 95
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 3 SYTKFVG 9
+YT FVG
Sbjct: 89 TYTNFVG 95
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 3 SYTKFVG 9
+YT FVG
Sbjct: 89 TYTNFVG 95
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 3 SYTKFVG 9
+YT FVG
Sbjct: 89 TYTNFVG 95
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 3 SYTKFVG 9
+YT FVG
Sbjct: 89 TYTNFVG 95
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 3 SYTKFVG 9
+YT FVG
Sbjct: 89 TYTNFVG 95
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 3 SYTKFVG 9
+YT FVG
Sbjct: 89 TYTNFVG 95
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 3 SYTKFVG 9
+YT FVG
Sbjct: 89 TYTNFVG 95
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 PSYTKFVGE 10
PS+T +GE
Sbjct: 459 PSFTANLGE 467
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 3 SYTKFVG 9
+YT FVG
Sbjct: 89 TYTNFVG 95
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 3 SYTKFVG 9
+YT FVG
Sbjct: 89 TYTNFVG 95
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 3 SYTKFVG 9
+YT FVG
Sbjct: 89 TYTNFVG 95
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 3 SYTKFVG 9
+YT FVG
Sbjct: 89 NYTNFVG 95
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 PSYTKFVGE 10
PS+T +GE
Sbjct: 462 PSFTANMGE 470
>sp|TR14_HCMVA|PROTEIN TRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KPSYTKF 7
KP YTK
Sbjct: 168 KPHYTKL 174
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 KPSYTKFVGE 10
+P KFVG+
Sbjct: 512 RPVSAKFVGD 521
60|SequenceR|305|296|LVLDCKPSYT
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 1 LVLDCKPS 8
+L CKPS
Sbjct: 264 FILGCKPS 271
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 LVLDCKPSYT 10
LV+ C+ S+T
Sbjct: 125 LVVSCRRSFT 134
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LVLDCKPSYT 10
LV+ C+ S+T
Sbjct: 92 LVVSCRRSFT 101
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 LVLDCKPSYT 10
LV+ C+ S+T
Sbjct: 92 LVVSCRRSFT 101
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 LVLDCKPSYT 10
LV+ C+ S+T
Sbjct: 107 LVVSCRRSFT 116
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 LVLDCKPSYT 10
LVL C P Y+
Sbjct: 1998 LVLVCFPVYS 2007
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 LVLDCKPSYT 10
LVL C P Y+
Sbjct: 1998 LVLVCFPVYS 2007
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 VLDCKP 7
V+DC P
Sbjct: 740 VIDCAP 745
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 VLDCKP 7
V+DC P
Sbjct: 740 VIDCAP 745
>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 5 CKPSY 9
CKP+Y
Sbjct: 303 CKPNY 307
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 1 LVLDCKP 7
+L CKP
Sbjct: 171 FILGCKP 177
61|SequenceR|310|301|EHAADLVLDC
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 EHAADLVLDC 10
+H DL+ DC
Sbjct: 4463 KHCYDLLRDC 4472
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 HAADLVLDC 10
H DL+L C
Sbjct: 883 HKDDLILTC 891
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HAADLVLDC 10
H A LV++C
Sbjct: 102 HCAKLVVEC 110
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HAADLVLDC 10
H A LV++C
Sbjct: 102 HCAKLVVEC 110
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 ADLVLD 9
ADLVLD
Sbjct: 3528 ADLVLD 3533
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 ADLVLD 9
ADLVLD
Sbjct: 3548 ADLVLD 3553
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 ADLVLD 9
ADLVLD
Sbjct: 3528 ADLVLD 3533
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 ADLVLD 9
ADLVLD
Sbjct: 3578 ADLVLD 3583
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 ADLVLD 9
ADLVLD
Sbjct: 3548 ADLVLD 3553
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 ADLVLD 9
ADLVLD
Sbjct: 3578 ADLVLD 3583
>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23
Query: 2 HAADLVLD 9
++ADL+LD
Sbjct: 418 NSADLLLD 425
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 HAADLVLD 9
H ADLV D
Sbjct: 448 HIADLVGD 455
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 1 EHAADLVLD 9
+HA L++D
Sbjct: 362 KHATQLIID 370
62|SequenceR|315|306|SETSKEHAAD
***** No hits found ******
63|SequenceR|320|311|KPGSSSETSK
>sp|BNL2A_EBVG|PROTEIN BNLF2a|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PGSSSET 8
PGSS+ET
Sbjct: 20 PGSSTET 26
>sp|BNL2A_EBVB9|PROTEIN BNLF2a|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PGSSSET 8
PGSS+ET
Sbjct: 20 PGSSTET 26
>sp|BNL2A_EBVA8|PROTEIN BNLF2a|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PGSSSET 8
PGSS+ET
Sbjct: 20 PGSSTET 26
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 PGSSSET 8
PGSSS T
Sbjct: 1203 PGSSSVT 1209
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 PGSSSET 8
PGSSS T
Sbjct: 1202 PGSSSVT 1208
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 PGSSSET 8
PGSSS T
Sbjct: 1202 PGSSSVT 1208
64|SequenceR|325|316|MIEERKPGSS
>sp|EAR_EBVG|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 MIEERKPGS 9
+IE+ PGS
Sbjct: 153 LIEDNIPGS 161
>sp|EAR_EBVB9|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 MIEERKPGS 9
+IE+ PGS
Sbjct: 153 LIEDNIPGS 161
>sp|EAR_EBVA8|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 MIEERKPGS 9
+IE+ PGS
Sbjct: 153 LIEDNIPGS 161
65|SequenceR|330|321|FLISEMIEER
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 1 FLISEMIEE 9
FLISEM+ +
Sbjct: 401 FLISEMLSK 409
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LISEMIEE 9
L+S++IEE
Sbjct: 1114 LVSQIIEE 1121
>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 FLISEMIEER 10
++ E+I+ER
Sbjct: 290 LIVEELIKER 299
>sp|PG034_VACCC|PROTEIN OPG034|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LISEMIEE 9
L+SE++EE
Sbjct: 61 LVSEIVEE 68
>sp|PG034_MONPV|PROTEIN OPG034|Monkeypox virus (MPXV)
Query: 2 LISEMIEE 9
L+SE++EE
Sbjct: 49 LVSEIVEE 56
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 FLISEMIEE 9
F++ EMI++
Sbjct: 359 FIVDEMIQD 367
>sp|PG034_VAR67|PROTEIN OPG034|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LISEMIEE 9
L+SE++EE
Sbjct: 49 LVSEIVEE 56
66|SequenceR|335|326|FDSCKFLISE
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 FDSCKFLISE 10
FDSCK L E
Sbjct: 1202 FDSCKLLKEE 1211
>sp|VP24_EBOZM|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 DSCKFLISE 10
D C FL+S+
Sbjct: 25 DLCNFLVSQ 33
>sp|VP24_EBOZ5|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 DSCKFLISE 10
D C FL+S+
Sbjct: 25 DLCNFLVSQ 33
>sp|VP24_EBOG4|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 DSCKFLISE 10
D C FL+S+
Sbjct: 25 DLCNFLVSQ 33
>sp|VP24_EBORR|MEMBRANE-ASSOCIATED protein VP24|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 DSCKFLISE 10
D C FLI++
Sbjct: 25 DLCNFLITQ 33
>sp|VP24_EBORE|MEMBRANE-ASSOCIATED protein VP24|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 DSCKFLISE 10
D C FLI++
Sbjct: 25 DLCNFLITQ 33
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 SCKFLISE 10
SC+FL S+
Sbjct: 342 SCQFLTSD 349
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 SCKFLISE 10
SC+FL S+
Sbjct: 342 SCQFLTSD 349
>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FDSCKFLIS 9
FD+C + I+
Sbjct: 153 FDNCNYTIN 161
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 CKFLIS 9
CKFLI+
Sbjct: 4197 CKFLIA 4202
>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)
Query: 3 SCKFL 7
SCKFL
Sbjct: 104 SCKFL 108
>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain AD169)
Query: 3 SCKFL 7
SCKFL
Sbjct: 103 SCKFL 107
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 CKFLIS 9
CKFLI+
Sbjct: 4197 CKFLIA 4202
>sp|VP24_EBOSU|MEMBRANE-ASSOCIATED protein VP24|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 DSCKFLIS 9
D C FL++
Sbjct: 25 DLCNFLVT 32
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 2 DSCKFLI 8
D+C FL+
Sbjct: 122 DACDFLV 128
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 FDSCKFL 7
FD CK L
Sbjct: 1063 FDGCKDL 1069
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Dumas)
Query: 1 FDSCKFL 7
FD CK L
Sbjct: 1063 FDGCKDL 1069
67|SequenceR|340|331|FQVVVFDSCK
>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)
Query: 1 FQVVVFDSC 9
F+VV++D C
Sbjct: 68 FRVVIYDQC 76
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 6 FDSCK 10
FDSC+
Sbjct: 1176 FDSCR 1180
>sp|GI_VZVO|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Oka vaccine)
Query: 2 QVVVFDSC 9
QV+ +D C
Sbjct: 88 QVIRYDGC 95
>sp|GI_VZVD|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 QVVVFDSC 9
QV+ +D C
Sbjct: 88 QVIRYDGC 95
68|SequenceR|345|336|SDMDKFQVVV
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 SDMDKFQVVV 10
SDM+ FQ +V
Sbjct: 1445 SDMELFQTLV 1454
>sp|G7_VARV|ASSEMBLY protein G7|Variola virus
Query: 1 SDMDKFQVV 9
SDM KF ++
Sbjct: 322 SDMQKFTIL 330
>sp|G7_VAR67|ASSEMBLY protein G7|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SDMDKFQVV 9
SDM KF ++
Sbjct: 322 SDMQKFTIL 330
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 SDMDKF 6
SD+DKF
Sbjct: 46 SDIDKF 51
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 SDMDKF 6
SD+DKF
Sbjct: 46 SDIDKF 51
>sp|G7_VACCA|ASSEMBLY protein G7|Vaccinia virus (strain Ankara) (VACV)
Query: 1 SDMDKFQVV 9
SDM KF ++
Sbjct: 322 SDMQKFTIL 330
>sp|G7_VACCC|ASSEMBLY protein G7|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SDMDKFQVV 9
SDM KF ++
Sbjct: 322 SDMQKFTIL 330
>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 SDMDKFQVV 9
+D+D F++V
Sbjct: 210 TDVDTFEIV 218
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 DMDKFQVV 9
DMD FQ +
Sbjct: 1446 DMDLFQTL 1453
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 DMDKFQVVV 10
DM+ FQ +V
Sbjct: 1446 DMELFQTLV 1454
69|SequenceR|350|341|RKAYSSDMDK
>sp|UL120_HCMVA|UNCHARACTERIZED protein UL120|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 YSSDMD 9
YS+DMD
Sbjct: 85 YSNDMD 90
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 RKAYSSDMDK 10
++ +SSD+D+
Sbjct: 482 KEKFSSDLDQ 491
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 AYSSDMDK 10
AY DMD+
Sbjct: 207 AYDMDMDE 214
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 AYSSDMDK 10
AY DMD+
Sbjct: 207 AYDMDMDE 214
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 4 YSSDMDK 10
Y+SD+DK
Sbjct: 401 YTSDVDK 407
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 RKAYSSDMDK 10
RK+Y S+ K
Sbjct: 1885 RKSYDSEYQK 1894
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 RKAYSSD 7
RK YS+D
Sbjct: 1518 RKGYSTD 1524
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 4 YSSDMDK 10
Y+SD+DK
Sbjct: 401 YTSDVDK 407
70|SequenceR|355|346|DTFADRKAYS
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 TFADRKAYS 10
TFAD K Y+
Sbjct: 312 TFADNKIYN 320
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 TFADRKAYS 10
TFAD K Y+
Sbjct: 312 TFADNKIYN 320
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 TFADRKAYS 10
TFAD K Y+
Sbjct: 312 TFADNKIYN 320
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 FADRKAYS 10
FADR YS
Sbjct: 6024 FADRDGYS 6031
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 DTFADRKAYS 10
D F DR+A S
Sbjct: 361 DVFLDRRASS 370
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 DTFADRKAYS 10
D F DR+A S
Sbjct: 346 DVFLDRRASS 355
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 FADRKAYS 10
F D KAYS
Sbjct: 1037 FKDDKAYS 1044
>sp|VP40_EBOZM|MATRIX protein VP40|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 ADRKAYS 10
AD+K YS
Sbjct: 101 ADQKTYS 107
>sp|VP40_EBOZ5|MATRIX protein VP40|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 ADRKAYS 10
AD+K YS
Sbjct: 101 ADQKTYS 107
>sp|VP40_EBOSU|MATRIX protein VP40|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 ADRKAYS 10
AD+K YS
Sbjct: 101 ADQKTYS 107
>sp|VP40_EBOG4|MATRIX protein VP40|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 4 ADRKAYS 10
AD+K YS
Sbjct: 101 ADQKTYS 107
71|SequenceR|360|351|ASIASDTFAD
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 SIASDTFA 9
S ASDT+A
Sbjct: 6143 STASDTYA 6150
72|SequenceR|365|356|EGNVKASIAS
>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 GNVKAS 7
GN+KAS
Sbjct: 146 GNIKAS 151
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 2 GNVKAS 7
GN+KAS
Sbjct: 592 GNIKAS 597
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GNVKAS 7
GN+KAS
Sbjct: 593 GNIKAS 598
>sp|NSP2_ROTH3|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 1 EGNVKASIAS 10
+ N+K+ IAS
Sbjct: 246 KNNIKSGIAS 255
73|SequenceR|370|361|DKEKHEGNVK
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 1 DKEKHEGNV 9
DKE H GN+
Sbjct: 620 DKENHGGNI 628
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 1 DKEKHEG 7
DKE+H G
Sbjct: 81 DKEQHPG 87
>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 1 DKEKHEG 7
DKE+H G
Sbjct: 81 DKEQHPG 87
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DKEKHEGNVK 10
+ EK+ GNVK
Sbjct: 1181 EHEKYHGNVK 1190
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 5 HEGNV 9
HEGNV
Sbjct: 115 HEGNV 119
>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)
Query: 5 HEGNV 9
HEGNV
Sbjct: 115 HEGNV 119
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 5 HEGNV 9
HEGNV
Sbjct: 859 HEGNV 863
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DKEKHEGNVK 10
+ EK+ GNVK
Sbjct: 1180 EHEKYHGNVK 1189
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 4 KHEGNVK 10
+H GN+K
Sbjct: 40 QHRGNIK 46
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 4 KHEGNV 9
KHEG V
Sbjct: 124 KHEGKV 129
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 KHEGNV 9
KHEG V
Sbjct: 117 KHEGKV 122
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 4 KHEGNV 9
KHEG V
Sbjct: 115 KHEGKV 120
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 4 KHEGNV 9
KHEG V
Sbjct: 118 KHEGKV 123
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 4 KHEGNV 9
KHEG V
Sbjct: 118 KHEGKV 123
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 KHEGNV 9
KHEG V
Sbjct: 118 KHEGKV 123
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 4 KHEGNV 9
KHEG V
Sbjct: 124 KHEGKV 129
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 4 KHEGNV 9
KHEG V
Sbjct: 118 KHEGKV 123
>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35
Query: 2 KEKHEGN 8
K+KH+G+
Sbjct: 174 KDKHKGD 180
>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11
Query: 2 KEKHEGN 8
K+KH+G+
Sbjct: 174 KDKHKGD 180
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 DKEKHEGNVK 10
DKE + N+K
Sbjct: 2043 DKESIDANIK 2052
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 DKEKHEGNVK 10
DKE + N+K
Sbjct: 2043 DKESIDANIK 2052
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 DKEKHEGNVK 10
DKE + N+K
Sbjct: 2043 DKESIDANIK 2052
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 KHEGNV 9
KHEG +
Sbjct: 117 KHEGKI 122
74|SequenceR|375|366|DWPELDKEKH
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 PELDKEKH 10
P+LD+E H
Sbjct: 419 PQLDREGH 426
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 3 PELDKEKH 10
P+LD+E H
Sbjct: 419 PQLDREGH 426
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 2 WPELDKEK 9
WP DKE+
Sbjct: 177 WPRTDKEE 184
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 2 WPELDK 7
WP LD+
Sbjct: 66 WPSLDR 71
>sp|VHR2_YLDV|PROBABLE host range protein 2|Yaba-like disease virus (YLDV)
Query: 1 DWPELDKEK 9
DW E+DK K
Sbjct: 52 DWSEVDKVK 60
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PELDKEK 9
PELD+E+
Sbjct: 519 PELDREQ 525
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PELDKEK 9
PELD+E+
Sbjct: 518 PELDREQ 524
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 PELDKE 8
PE+DKE
Sbjct: 513 PEVDKE 518
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 WPELD 6
WP+LD
Sbjct: 2286 WPDLD 2290
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 WPELD 6
WP+LD
Sbjct: 2285 WPDLD 2289
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 WPELD 6
WP+LD
Sbjct: 2286 WPDLD 2290
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 WPELD 6
WP+LD
Sbjct: 2285 WPDLD 2289
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 WPELD 6
WP+LD
Sbjct: 2286 WPDLD 2290
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 WPELD 6
WP+LD
Sbjct: 2285 WPDLD 2289
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 WPELD 6
WP+LD
Sbjct: 2285 WPDLD 2289
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 WPELD 6
WP+LD
Sbjct: 2285 WPDLD 2289
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 WPELD 6
WP+LD
Sbjct: 2285 WPDLD 2289
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 DWPELDKEKH 10
D P D +KH
Sbjct: 34 DTPNYDVQKH 43
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 1 DWPELDKEKH 10
D P D +KH
Sbjct: 34 DTPNYDVQKH 43
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 DWPELDKEKH 10
D P D +KH
Sbjct: 34 DTPNYDVQKH 43
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 1 DWPELDKEKH 10
D P D +KH
Sbjct: 34 DTPNYDVQKH 43
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PELDKEK 9
PELD+E+
Sbjct: 519 PELDREQ 525
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 PELDKEK 9
P LD+EK
Sbjct: 1924 PRLDQEK 1930
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 PELDKEK 9
P LD+EK
Sbjct: 1916 PRLDQEK 1922
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 PELDKEK 9
P LD+EK
Sbjct: 1924 PRLDQEK 1930
>sp|PG027_MONPV|INTERFERON antagonist OPG027|Monkeypox virus (MPXV)
Query: 1 DWPELDKEK 9
DW E+D+ K
Sbjct: 51 DWSEIDEVK 59
>sp|PG027_VARV|INTERFERON antagonist OPG027|Variola virus
Query: 1 DWPELDKEK 9
DW E+D+ K
Sbjct: 51 DWSEIDEVK 59
>sp|PG027_VAR67|INTERFERON antagonist OPG027|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 DWPELDKEK 9
DW E+D+ K
Sbjct: 51 DWSEIDEVK 59
>sp|PG027_MONPZ|INTERFERON antagonist OPG027|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 DWPELDKEK 9
DW E+D+ K
Sbjct: 51 DWSEIDEVK 59
>sp|PG027_VACCC|INTERFERON antagonist OPG027|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DWPELDKEK 9
DW E+D+ K
Sbjct: 51 DWSEIDEVK 59
>sp|PG027_VACCA|INTERFERON antagonist OPG027|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DWPELDKEK 9
DW E+D+ K
Sbjct: 51 DWSEIDEVK 59
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PELDKEK 9
PELD+E+
Sbjct: 518 PELDREQ 524
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 DWPELDKEK 9
DW + D+E+
Sbjct: 718 DWEQPDREE 726
>sp|VHR2_YMTV5|PROBABLE host range protein 2|Yaba monkey tumor virus (strain
Query: 1 DWPELDKEK 9
DW E+D K
Sbjct: 52 DWSEIDSVK 60
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 WPELDKEK 9
W EL K+K
Sbjct: 2873 WKELGKKK 2880
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 WPELDKEK 9
W EL K+K
Sbjct: 2870 WKELGKKK 2877
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 WPELDKEK 9
W EL K+K
Sbjct: 2873 WKELGKKK 2880
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 WPELDKEK 9
W EL K+K
Sbjct: 2873 WKELGKKK 2880
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 DWPELDKEK 9
DW + D+E+
Sbjct: 718 DWEQPDREE 726
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 WPELDKEK 9
W EL K+K
Sbjct: 2873 WKELGKKK 2880
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 PELDKEK 9
PE++KE+
Sbjct: 2642 PEVEKER 2648
75|SequenceR|380|371|TLEGADWPEL
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 LEGADWPEL 10
L+G DW EL
Sbjct: 1336 LDGFDWLEL 1344
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 5 ADWPEL 10
ADWP++
Sbjct: 678 ADWPDM 683
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 5 ADWPEL 10
ADWP++
Sbjct: 678 ADWPDM 683
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 5 ADWPEL 10
ADWP++
Sbjct: 678 ADWPDM 683
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 5 ADWPEL 10
ADWP++
Sbjct: 678 ADWPDM 683
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 5 ADWPEL 10
ADWP++
Sbjct: 678 ADWPDM 683
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 EGADWPEL 10
+GAD+P L
Sbjct: 266 DGADYPPL 273
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 EGADWPEL 10
+GAD+P L
Sbjct: 266 DGADYPPL 273
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 EGADWPEL 10
+GAD+P L
Sbjct: 266 DGADYPPL 273
>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)
Query: 4 GADWPEL 10
G DWP L
Sbjct: 289 GKDWPAL 295
>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 TLEGADWPEL 10
T+ G DWP +
Sbjct: 277 TIWGRDWPAI 286
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 5 ADWPE 9
A+WPE
Sbjct: 105 AEWPE 109
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 5 ADWPE 9
A+WPE
Sbjct: 105 AEWPE 109
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 1 TLEGADWP 8
T EG+D+P
Sbjct: 165 TKEGSDYP 172
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 3 EGADWPEL 10
+ WPEL
Sbjct: 243 QNTSWPEL 250
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 EGADWPEL 10
+ WPEL
Sbjct: 243 QNTSWPEL 250
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 3 EGADW 7
EG DW
Sbjct: 417 EGGDW 421
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 DWPEL 10
DWPE+
Sbjct: 70 DWPEV 74
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 DWPEL 10
DWPE+
Sbjct: 70 DWPEV 74
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 3 EGADW 7
EG DW
Sbjct: 416 EGGDW 420
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 EGADWP 8
+GA WP
Sbjct: 6063 KGAAWP 6068
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 EGADWPEL 10
+GADW +
Sbjct: 1445 DGADWADF 1452
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 ADWPEL 10
A WPEL
Sbjct: 509 AYWPEL 514
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 TLEGADWPE 9
TLE W E
Sbjct: 134 TLESVQWQE 142
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 TLEGADWPE 9
TLE W E
Sbjct: 134 TLESVQWQE 142
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 1 TLEGADWP 8
T+EG D P
Sbjct: 30 TVEGVDCP 37
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 3 EGADWPEL 10
EG W E+
Sbjct: 425 EGGSWKEI 432
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 3 EGADWPEL 10
+GADW +
Sbjct: 1442 DGADWADF 1449
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 1 TLEGADW 7
TL+G +W
Sbjct: 338 TLQGHEW 344
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 3 EGADW 7
EG DW
Sbjct: 432 EGGDW 436
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 1 TLEGADW 7
TL+G +W
Sbjct: 346 TLQGFEW 352
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 3 EGADW 7
EG DW
Sbjct: 429 EGGDW 433
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 3 EGADW 7
EG DW
Sbjct: 442 EGGDW 446
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 3 EGADW 7
EG DW
Sbjct: 428 EGGDW 432
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TLEGADW 7
TL+G +W
Sbjct: 346 TLQGFEW 352
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 2 LEGADW 7
LEG+ W
Sbjct: 11 LEGSSW 16
76|SequenceR|385|376|LEENATLEGA
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 2 EENATLE 8
EEN T+E
Sbjct: 13 EENGTVE 19
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 2 EENATLE 8
EEN T+E
Sbjct: 13 EENGTVE 19
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 LEENATLEG 9
+EEN + EG
Sbjct: 1665 VEENQSTEG 1673
>sp|GM_VZVO|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Oka vaccine)
Query: 4 NATLEGA 10
NATL+G
Sbjct: 80 NATLDGG 86
>sp|GM_VZVD|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 NATLEGA 10
NATL+G
Sbjct: 80 NATLDGG 86
>sp|NEF_HV192|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 LEENATLEG 9
LEE LEG
Sbjct: 91 LEEKGGLEG 99
77|SequenceR|390|381|NELAELEENA
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 1 NELAELEEN 9
+ELAE+E++
Sbjct: 327 HELAEMEDS 335
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 NELAELEEN 9
+ELAE+E++
Sbjct: 327 HELAEMEDS 335
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 1 NELAELEE 8
+ELAE+E+
Sbjct: 326 HELAEMED 333
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 1 NELAELEE 8
NE+ EL+E
Sbjct: 430 NEILELDE 437
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 1 NELAELEE 8
NE+ EL+E
Sbjct: 435 NEILELDE 442
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 1 NELAELEE 8
NE+ EL+E
Sbjct: 428 NEILELDE 435
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 1 NELAELEE 8
NE+ EL+E
Sbjct: 430 NEILELDE 437
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 1 NELAELEE 8
NE+ EL+E
Sbjct: 435 NEILELDE 442
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 1 NELAELEE 8
NE+ EL+E
Sbjct: 435 NEILELDE 442
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 1 NELAELEE 8
NE+ EL+E
Sbjct: 427 NEILELDE 434
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 1 NELAELEE 8
NE+ EL+E
Sbjct: 437 NEILELDE 444
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 1 NELAELEE 8
NE+ EL+E
Sbjct: 426 NEILELDE 433
>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)
Query: 1 NELAELEENA 10
N L E+ ENA
Sbjct: 181 NNLKEIIENA 190
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 1 NELAELEE 8
NE+ EL+E
Sbjct: 437 NEILELDE 444
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 NELAELEENA 10
N L E+ ENA
Sbjct: 179 NNLKEIIENA 188
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 NELAELEE 8
NE+ EL+E
Sbjct: 427 NEILELDE 434
78|SequenceR|395|386|GNSVDNELAE
>sp|US08_HCMVM|MEMBRANE glycoprotein US8|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GNSVDN 6
GNSVDN
Sbjct: 163 GNSVDN 168
>sp|US08_HCMVA|UNIQUE short US8 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GNSVDN 6
GNSVDN
Sbjct: 163 GNSVDN 168
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 NSVDNELAE 10
N+VDNE+ +
Sbjct: 4089 NNVDNEIVK 4097
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 NSVDNELAE 10
N+VDNE+ +
Sbjct: 4089 NNVDNEIVK 4097
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 SVDNELAE 10
S+D E+AE
Sbjct: 586 SIDKEMAE 593
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 SVDNELAE 10
S+D E+AE
Sbjct: 586 SIDKEMAE 593
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 SVDNELAE 10
S+D E+AE
Sbjct: 586 SIDKEMAE 593
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 SVDNELAE 10
S+D E+AE
Sbjct: 586 SIDKEMAE 593
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 SVDNELAE 10
S+D E+AE
Sbjct: 586 SIDREMAE 593
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 2 NSVDNELA 9
+S+DNEL+
Sbjct: 100 HSIDNELS 107
>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)
Query: 1 GNSVDNELAE 10
GN D+ +AE
Sbjct: 293 GNESDDAIAE 302
79|SequenceR|400|391|DNPDWGNSVD
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 DNPDW 5
D+PDW
Sbjct: 1345 DSPDW 1349
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 1 DNPDW 5
D PDW
Sbjct: 372 DRPDW 376
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 1 DNPDW 5
D PDW
Sbjct: 369 DRPDW 373
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 NPDWGNSVD 10
NP WG+ D
Sbjct: 1563 NPTWGSVRD 1571
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 NPDWGNSVD 10
NP WG+ D
Sbjct: 1563 NPTWGSVRD 1571
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DNPDWGNSVD 10
DN D+G VD
Sbjct: 167 DNDDYGLYVD 176
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DNPDWGNSVD 10
DN D+G VD
Sbjct: 167 DNDDYGLYVD 176
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 DNPDWG 6
+ PDWG
Sbjct: 313 ERPDWG 318
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 NPDWGN 7
NPDW +
Sbjct: 1849 NPDWSS 1854
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 NPDWGN 7
NPDW +
Sbjct: 1849 NPDWSS 1854
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 NPDWGN 7
NPDW +
Sbjct: 1849 NPDWSS 1854
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 2 NPDWGNS 8
NP W N+
Sbjct: 232 NPHWNNA 238
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 NPDWGN 7
NPDW +
Sbjct: 1849 NPDWSS 1854
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 DNPDWGNSVD 10
DN DW NSV+
Sbjct: 509 DNQDW-NSVE 517
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 2 NPDWGNS 8
NP W N+
Sbjct: 232 NPHWNNA 238
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 2 NPDWGNS 8
NP W N+
Sbjct: 232 NPHWNNA 238
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 NPDWGNS 8
NP W N+
Sbjct: 512 NPHWNNA 518
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 NPDWGNS 8
NP W N+
Sbjct: 512 NPHWNNA 518
>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 NPDWGN 7
+P WGN
Sbjct: 216 DPYWGN 221
>sp|NS1_INCGL|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Great
Query: 2 NPDWGN 7
+P WGN
Sbjct: 216 DPYWGN 221
>sp|HBSAG_HBVB3|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 1 DNPDW 5
DNPDW
Sbjct: 39 DNPDW 43
>sp|NSP5_ROTHB|NON-STRUCTURAL protein 5|Rotavirus A (strain
Query: 2 NPDWGNSVD 10
NPD G S+D
Sbjct: 84 NPDAGVSMD 92
>sp|NS1_INCTA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 NPDWGN 7
+P WGN
Sbjct: 216 DPYWGN 221
>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)
Query: 2 NPDWGN 7
+P WGN
Sbjct: 216 DPYWGN 221
>sp|NS1_INCJH|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 NPDWGN 7
+P WGN
Sbjct: 216 DPYWGN 221
>sp|NS1_INCCA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/California/1978)
Query: 2 NPDWGN 7
+P WGN
Sbjct: 221 DPYWGN 226
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 NPDWGNSV 9
NP W +V
Sbjct: 5474 NPSWSKAV 5481
>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 NPDWGN 7
+P WGN
Sbjct: 221 DPYWGN 226
>sp|US08_HCMVM|MEMBRANE glycoprotein US8|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 WGNSVD 10
+GNSVD
Sbjct: 162 YGNSVD 167
>sp|US08_HCMVA|UNIQUE short US8 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 WGNSVD 10
+GNSVD
Sbjct: 162 YGNSVD 167
>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)
Query: 2 NPDWGN 7
+P WGN
Sbjct: 221 DPYWGN 226
>sp|NS1_INCAA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Ann
Query: 2 NPDWGN 7
+P WGN
Sbjct: 221 DPYWGN 226
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 2 NPDWGN 7
NP WG+
Sbjct: 214 NPPWGD 219
>sp|HBSAG_HBVB2|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 1 DNPDW 5
DNPDW
Sbjct: 28 DNPDW 32
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 PDWGN 7
PDW N
Sbjct: 614 PDWNN 618
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 2 NPDWGN 7
NP W N
Sbjct: 232 NPHWNN 237
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 2 NPDWGN 7
NP WG+
Sbjct: 214 NPPWGD 219
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 PDWGN 7
PDW N
Sbjct: 610 PDWNN 614
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 PDWGN 7
PDW N
Sbjct: 607 PDWNN 611
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 NPDWGN 7
+PDW N
Sbjct: 606 SPDWNN 611
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 PDWGN 7
PDW N
Sbjct: 617 PDWNN 621
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 3 PDWG 6
PDWG
Sbjct: 485 PDWG 488
>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 DNPDWGNSV 9
+ PDWG +
Sbjct: 313 ERPDWGYTT 321
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 PDWGN 7
PDW N
Sbjct: 610 PDWNN 614
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 PDWGN 7
PDW N
Sbjct: 606 PDWNN 610
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 NPDWGN 7
+PDW N
Sbjct: 614 SPDWKN 619
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 2 NPDWGN 7
NP WG+
Sbjct: 215 NPPWGD 220
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 5 WGNSVD 10
WG +VD
Sbjct: 432 WGENVD 437
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 NPDWGNSV 9
NP W +V
Sbjct: 5813 NPAWSKAV 5820
>sp|NCAP_DUGBV|NUCLEOPROTEIN virus
Query: 2 NPDWGN 7
NP WG+
Sbjct: 214 NPPWGD 219
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 DNPDWG 6
DN WG
Sbjct: 2446 DNTKWG 2451
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 DNPDWG 6
D+P WG
Sbjct: 1586 DDPVWG 1591
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 DNPDWG 6
DN WG
Sbjct: 2358 DNTKWG 2363
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 PDWGN 7
PDW N
Sbjct: 616 PDWDN 620
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 1 DNPDWG 6
DN WG
Sbjct: 128 DNATWG 133
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 1 DNPDWG 6
DN WG
Sbjct: 128 DNATWG 133
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 DNPDWG 6
DN WG
Sbjct: 128 DNATWG 133
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 DNPDWG 6
DN WG
Sbjct: 128 DNATWG 133
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 PDWGN 7
PDW N
Sbjct: 619 PDWEN 623
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 DWGN 7
DWGN
Sbjct: 132 DWGN 135
80|SequenceR|405|396|NYRFMDNPDW
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 YRFMDNPD 9
Y F++NPD
Sbjct: 4532 YDFVENPD 4539
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 YRFMDNPD 9
Y F++NPD
Sbjct: 4555 YDFVENPD 4562
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 YRFMDNPD 9
Y F++NPD
Sbjct: 4532 YDFVENPD 4539
>sp|PG027_VARV|INTERFERON antagonist OPG027|Variola virus
Query: 2 YRFMDNPDW 10
+RF+ PDW
Sbjct: 44 FRFIIRPDW 52
>sp|PG027_VAR67|INTERFERON antagonist OPG027|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 YRFMDNPDW 10
+RF+ PDW
Sbjct: 44 FRFIIRPDW 52
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RFMDNPDW 10
RF+ PDW
Sbjct: 387 RFIVRPDW 394
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RFMDNPDW 10
RF+ PDW
Sbjct: 387 RFIVRPDW 394
>sp|HBSAG_HBVB3|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 6 DNPDW 10
DNPDW
Sbjct: 39 DNPDW 43
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 YRFMDNPD 9
Y F++NPD
Sbjct: 4570 YDFVENPD 4577
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 YRFMDNPD 9
Y F++NPD
Sbjct: 4590 YDFVENPD 4597
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 YRFMDNPD 9
Y F++NPD
Sbjct: 4620 YDFVENPD 4627
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 NYRFMDNPDW 10
NY F NP++
Sbjct: 835 NYLFKSNPNY 844
>sp|PG027_VACCC|INTERFERON antagonist OPG027|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YRFMDNPDW 10
+RF+ PDW
Sbjct: 44 FRFIIRPDW 52
>sp|PG027_VACCA|INTERFERON antagonist OPG027|Vaccinia virus (strain Ankara) (VACV)
Query: 2 YRFMDNPDW 10
+RF+ PDW
Sbjct: 44 FRFIIRPDW 52
>sp|HBSAG_HBVB2|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 6 DNPDW 10
DNPDW
Sbjct: 28 DNPDW 32
>sp|UL138_HCMVM|PROTEIN UL138|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YRFMDNPD 9
YRF + PD
Sbjct: 80 YRFSERPD 87
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 NYRFMDNPDW 10
NY F NP++
Sbjct: 835 NYLFKANPNY 844
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 NYRFMDNPDW 10
NY F NP++
Sbjct: 835 NYLFKANPNY 844
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YRFMDNPDW 10
Y++ DN D+
Sbjct: 163 YQYADNDDY 171
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 YRFMDNPDW 10
Y++ DN D+
Sbjct: 163 YQYADNDDY 171
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 YRFMDNPDW 10
++ DN DW
Sbjct: 505 WKHKDNQDW 513
>sp|PG027_MONPV|INTERFERON antagonist OPG027|Monkeypox virus (MPXV)
Query: 3 RFMDNPDW 10
RF+ PDW
Sbjct: 45 RFIIRPDW 52
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 RFMDNP 8
RF DNP
Sbjct: 1756 RFKDNP 1761
>sp|PG027_MONPZ|INTERFERON antagonist OPG027|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 3 RFMDNPDW 10
RF+ PDW
Sbjct: 45 RFVIRPDW 52
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 1 NYRFMDNPD 9
NY+ DNP+
Sbjct: 898 NYKSADNPN 906
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 NYRFMDNPD 9
NY+ DNP+
Sbjct: 898 NYKSADNPN 906
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 1 NYRFMDNPD 9
NY+ DNP+
Sbjct: 899 NYKSADNPN 907
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NYRFMDNPD 9
NY+ DNP+
Sbjct: 899 NYKSADNPN 907
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 NYRFMDNPD 9
NY+ DNP+
Sbjct: 899 NYKSADNPN 907
>sp|E4OR1_ADE09|E4-ORF1 adenovirus D serotype 9
Query: 2 YRFMDNP 8
Y F+D+P
Sbjct: 6 YAFIDSP 12
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 YRFMDN 7
YR MDN
Sbjct: 673 YRVMDN 678
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 NYRFMDN 7
NY F DN
Sbjct: 1677 NYNFSDN 1683
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 NYRFMDN 7
NY F DN
Sbjct: 1677 NYNFSDN 1683
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 YRFMDN 7
YR MDN
Sbjct: 673 YRVMDN 678
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 YRFMDNPDW 10
+ F D+ DW
Sbjct: 798 FVFRDSDDW 806
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 YRFMDNPDW 10
+ F D+ DW
Sbjct: 798 FVFRDSDDW 806
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 2 YRFMDN 7
YR MDN
Sbjct: 672 YRVMDN 677
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 YRFMDNPDW 10
+ F D+ DW
Sbjct: 798 FVFRDSDDW 806
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 4 FMDNP 8
F+DNP
Sbjct: 241 FLDNP 245
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 NYRFMDNPDW 10
+YR DN W
Sbjct: 1070 HYRLGDNQIW 1079
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 FMDNPDW 10
F D+ DW
Sbjct: 800 FRDSDDW 806
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 FMDNPDW 10
F D+ DW
Sbjct: 800 FRDSDDW 806
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 4 FMDNPDW 10
F D+ DW
Sbjct: 800 FRDSDDW 806
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 FMDNPDW 10
F D+ DW
Sbjct: 800 FRDSDDW 806
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 FMDNPDW 10
F D+ DW
Sbjct: 800 FRDSDDW 806
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 FMDNPDW 10
F D+ DW
Sbjct: 800 FRDSDDW 806
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 FMDNPDW 10
F D+ DW
Sbjct: 800 FRDSDDW 806
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 YRFMDNPDW 10
+ F D+ DW
Sbjct: 790 FVFKDSDDW 798
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 NYRFMDNPD 9
N++ DNP+
Sbjct: 903 NFKSPDNPN 911
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 2 YRFMDNPDW 10
Y F + P+W
Sbjct: 288 YAFGEYPEW 296
81|SequenceR|410|401|GYNEENYRFM
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 2 YNEENYRFM 10
+NE NYR++
Sbjct: 527 HNEVNYRYL 535
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 2 YNEENYRFM 10
+NE NYR++
Sbjct: 526 HNEVNYRYL 534
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 2 YNEENYRFM 10
+NE NYR++
Sbjct: 525 HNEVNYRYL 533
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 2 YNEENYRFM 10
+NE NYR++
Sbjct: 526 HNEVNYRYL 534
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 1 GYNEENYRFM 10
G +EE+ RF+
Sbjct: 985 GVDEEDVRFL 994
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 GYNEENYRFM 10
G +EE+ RF+
Sbjct: 958 GVDEEDVRFL 967
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 GYNEENYRFM 10
G +EE+ RF+
Sbjct: 963 GVDEEDVRFL 972
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 YNEENYRFM 10
+NEE Y F+
Sbjct: 4453 FNEEFYNFL 4461
Query: 2 YNEENY---RFM 10
YN +NY RF+
Sbjct: 5486 YNSQNYVASRFL 5497
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 4 EENYRFM 10
EE YRF+
Sbjct: 528 EERYRFL 534
>sp|UL04_HCMVA|EARLY glycoprotein GP48|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 YNEENYRF 9
YNE++YR+
Sbjct: 97 YNEQHYRY 104
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YNEENYRFM 10
Y EE YR +
Sbjct: 627 YTEEIYRLL 635
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 1 GYNEENYRFM 10
G N +NY M
Sbjct: 466 GVNTQNYNVM 475
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 YNEENY 7
YN+EN+
Sbjct: 656 YNKENF 661
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 NEENYRFM 10
+EEN RF+
Sbjct: 1848 DEENPRFL 1855
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 NEENYRFM 10
+EEN RF+
Sbjct: 1848 DEENPRFL 1855
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 NEENYRFM 10
+EEN RF+
Sbjct: 1848 DEENPRFL 1855
>sp|VE6_HPV32|PROTEIN E6|Human papillomavirus type 32
Query: 2 YNEENYRFM 10
YN ++RF+
Sbjct: 121 YNGRHFRFI 129
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 2 YNEENY 7
YN ENY
Sbjct: 339 YNWENY 344
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 YNEENY 7
YN +NY
Sbjct: 5511 YNSQNY 5516
>sp|TAT_HV196|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 YNEENYR 8
YN EN++
Sbjct: 60 YNSENHQ 66
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 GYNEENYRF 9
GY E YRF
Sbjct: 506 GYIPEFYRF 514
>sp|VU84_HHV6Z|PROTEIN U84|Human herpesvirus 6B (strain Z29)
Query: 2 YNEENYR 8
+N+E YR
Sbjct: 79 FNKEKYR 85
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 1 GYNEENYR 8
G+N ++YR
Sbjct: 369 GFNYKSYR 376
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 YNEENY 7
YN +NY
Sbjct: 5849 YNSQNY 5854
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 YNEENY 7
YN +NY
Sbjct: 5869 YNSQNY 5874
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 YNEENY 7
YN +NY
Sbjct: 5899 YNSQNY 5904
82|SequenceR|415|406|YTSVVGYNEE
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 TSVVGYNE 9
TSVV +NE
Sbjct: 3475 TSVVSFNE 3482
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 TSVVGYNE 9
TSVV +NE
Sbjct: 3475 TSVVSFNE 3482
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 2 TSVVGYNE 9
TSV GY E
Sbjct: 36 TSVSGYTE 43
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 2 TSVVGYNE 9
TSV GY E
Sbjct: 36 TSVSGYTE 43
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 2 TSVVGYNE 9
TSV GY E
Sbjct: 36 TSVSGYTE 43
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 2 TSVVGYNE 9
TSV GY E
Sbjct: 36 TSVSGYTE 43
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 YTSVVGY 7
YT+ VGY
Sbjct: 90 YTNFVGY 96
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 1 YTSVVGY 7
YT+ VGY
Sbjct: 90 YTNFVGY 96
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 1 YTSVVGY 7
YT+ VGY
Sbjct: 90 YTNFVGY 96
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 1 YTSVVGY 7
YT+ VGY
Sbjct: 90 YTNFVGY 96
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 1 YTSVVGY 7
YT+ VGY
Sbjct: 90 YTNFVGY 96
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 1 YTSVVGY 7
YT+ VGY
Sbjct: 90 YTNFVGY 96
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 1 YTSVVGY 7
YT+ VGY
Sbjct: 90 YTNFVGY 96
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 YTSVVGY 7
YT+ VGY
Sbjct: 90 YTNFVGY 96
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 YTSVVGY 7
YT+ VGY
Sbjct: 90 YTNFVGY 96
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 1 YTSVVGY 7
YT+ VGY
Sbjct: 90 YTNFVGY 96
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 YTSVVGY 7
YT+ VGY
Sbjct: 90 YTNFVGY 96
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 1 YTSVVGY 7
YT+ VGY
Sbjct: 90 YTNFVGY 96
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 YTSVVGY 7
YT+ VGY
Sbjct: 90 YTNFVGY 96
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 YTSVVGY 7
YT+ VGY
Sbjct: 90 YTNFVGY 96
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 1 YTSVVGY 7
YT+ VGY
Sbjct: 90 YTNFVGY 96
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 SVVGYN 8
SV+GYN
Sbjct: 504 SVLGYN 509
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 SVVGYN 8
SV+GYN
Sbjct: 504 SVLGYN 509
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 SVVGYN 8
SV+GYN
Sbjct: 504 SVLGYN 509
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 SVVGYN 8
SV+GYN
Sbjct: 504 SVLGYN 509
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 SVVGYN 8
SV+GYN
Sbjct: 504 SVLGYN 509
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 TSVVGY 7
TSV+GY
Sbjct: 1505 TSVIGY 1510
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 5 VGYNEE 10
VGY+EE
Sbjct: 1987 VGYSEE 1992
>sp|MATRX_HRSV|MATRIX protein|Human respiratory syncytial virus
Query: 1 YTSVVGYN 8
YT+ V YN
Sbjct: 14 YTAAVQYN 21
>sp|MATRX_HRSVA|MATRIX protein|Human respiratory syncytial virus A
Query: 1 YTSVVGYN 8
YT+ V YN
Sbjct: 14 YTAAVQYN 21
>sp|MATRX_HRSS2|MATRIX protein|Human respiratory syncytial virus A
Query: 1 YTSVVGYN 8
YT+ V YN
Sbjct: 14 YTAAVQYN 21
83|SequenceR|420|411|SLSSDYTSVV
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 SSDYTSVV 10
SSDYT +V
Sbjct: 291 SSDYTMLV 298
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 SSDYTSVV 10
SSDYT +V
Sbjct: 291 SSDYTMLV 298
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 SSDYTSVV 10
SSDYT +V
Sbjct: 291 SSDYTMLV 298
>sp|UL144_HCMVO|MEMBRANE glycoprotein UL144|Human cytomegalovirus (strain Toledo) (HHV-5)
Query: 4 SDYTSV 9
+DYTSV
Sbjct: 49 TDYTSV 54
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 SDYTSVV 10
DYTSVV
Sbjct: 3058 GDYTSVV 3064
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 SDYTSVV 10
DYTSVV
Sbjct: 3058 GDYTSVV 3064
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 SDYTSVV 10
DYTSVV
Sbjct: 3116 GDYTSVV 3122
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 SDYTSVV 10
DYTSVV
Sbjct: 3096 GDYTSVV 3102
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 SDYTSVV 10
DYTSVV
Sbjct: 3116 GDYTSVV 3122
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 SDYTSVV 10
DYTSVV
Sbjct: 3096 GDYTSVV 3102
84|SequenceR|425|416|PVTYSSLSSD
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 3 TYSSLSSD 10
TYS L+SD
Sbjct: 359 TYSCLTSD 366
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 4 YSSLSSD 10
YS+LS+D
Sbjct: 744 YSALSND 750
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 4 YSSLSSD 10
YS+LS+D
Sbjct: 744 YSALSND 750
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 4 YSSLSSD 10
YS+LS+D
Sbjct: 744 YSALSND 750
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 4 YSSLSSD 10
YS+LS+D
Sbjct: 744 YSALSND 750
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 PVTYSS 6
PVTY+S
Sbjct: 1321 PVTYTS 1326
85|SequenceR|430|421|NDRELPVTYS
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 NDRELPVTYS 10
+DR+ PV++S
Sbjct: 484 DDRQGPVSFS 493
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 2 DRELPVTY 9
DR +P+ Y
Sbjct: 618 DRHIPIVY 625
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 DRELPVT 8
D+ELP+T
Sbjct: 477 DKELPLT 483
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 1 NDRELPVTY 9
ND E PV+Y
Sbjct: 128 NDTENPVSY 136
>sp|PHOSP_VSNJM|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 2 DRELPVTYS 10
D ++PVT+S
Sbjct: 93 DDDIPVTFS 101
>sp|PHOSP_VSNJO|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 2 DRELPVTYS 10
D ++PVT+S
Sbjct: 93 DDDIPVTFS 101
>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 3 RELPVTY 9
REL VTY
Sbjct: 111 RELVVTY 117
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 1 NDRELPVTY 9
+DR++P +Y
Sbjct: 282 SDRQMPGSY 290
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 1 NDRELPVT 8
N+R P+T
Sbjct: 292 NERRFPIT 299
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 1 NDRELPVTY 9
N R P+T+
Sbjct: 47 NSRHTPITF 55
>sp|VE4_HPV39|PROTEIN E4|Human papillomavirus 39
Query: 2 DRELPVT 8
+RE+PVT
Sbjct: 3 NREVPVT 9
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 NDRELPVTY 9
ND LP+ +
Sbjct: 1882 NDHSLPIEF 1890
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 NDRELPVTY 9
ND LP+ +
Sbjct: 1882 NDHSLPIEF 1890
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 NDRELPVTY 9
ND LP+ +
Sbjct: 1882 NDHSLPIEF 1890
86|SequenceR|435|426|LFEESNDREL
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 2 FEESNDREL 10
F E NDR+L
Sbjct: 786 FHEHNDRDL 794
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 1 LFEESNDREL 10
LFEE ND ++
Sbjct: 38 LFEEGNDTDI 47
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FEESNDREL 10
F E NDR+L
Sbjct: 1109 FHEDNDRDL 1117
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 FEESNDRE 9
F+E +DRE
Sbjct: 42 FQEGSDRE 49
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 1 LFEESNDREL 10
+FEE DR+
Sbjct: 312 VFEEPPDRDF 321
>sp|UL24_HHV2H|PROTEIN UL24|Human herpesvirus 2 (strain HG52)
Query: 1 LFEESNDREL 10
+FE +ND+ L
Sbjct: 93 VFEFANDKTL 102
>sp|UL24_HHV11|PROTEIN UL24|Human herpesvirus 1 (strain 17)
Query: 1 LFEESNDREL 10
+FE +ND+ L
Sbjct: 82 VFEFANDKTL 91
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 1 LFEESNDREL 10
+FEE DR+
Sbjct: 312 VFEEPPDRDF 321
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 2 FEESNDRE 9
F+ES D E
Sbjct: 616 FQESEDEE 623
87|SequenceR|440|431|RAERKLFEES
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 ERKLFEES 10
ER+LFEES
Sbjct: 218 ERRLFEES 225
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 ERKLFEES 10
ER+LFEES
Sbjct: 218 ERRLFEES 225
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 1 RAERKLFEE 9
RA R+LFE+
Sbjct: 123 RARRRLFEQ 131
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 2 AERKLFEE 9
++R+LFEE
Sbjct: 123 SKRRLFEE 130
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 1 RAERKLFE 8
+A+R+LFE
Sbjct: 122 KAKRRLFE 129
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 1 RAERKLFEES 10
+++R+LFE+S
Sbjct: 115 QSKRRLFEDS 124
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 RAERKLFEE 9
+++R+LFEE
Sbjct: 104 KSKRRLFEE 112
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 2 AERKLFE 8
A+R+LFE
Sbjct: 122 AKRRLFE 128
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 1 RAERKLFEE 9
+++R+LFE+
Sbjct: 105 KSKRRLFEQ 113
88|SequenceR|445|436|ALQNARAERK
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 4 NARAERK 10
NAR ERK
Sbjct: 96 NARKERK 102
89|SequenceR|450|441|SEIEEALQNA
>sp|E1A_ADE04|EARLY E1A protein|Human adenovirus E serotype 4
Query: 2 EIEEALQNA 10
E E+A+QNA
Sbjct: 126 EDEQAIQNA 134
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 3 IEEALQNA 10
IE+AL+N+
Sbjct: 633 IEDALRNS 640
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 2 EIEEALQNA 10
EI+EAL N+
Sbjct: 623 EIQEALLNS 631
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 2 EIEEALQNA 10
EI+EAL N+
Sbjct: 623 EIQEALLNS 631
90|SequenceR|455|446|KYQASSEIEE
>sp|VP7_ROTH6|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 KYQASSEIE 9
KY A+SE++
Sbjct: 143 KYNANSELD 151
>sp|VP7_ROTHB|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 KYQASSEIE 9
KY A+SE++
Sbjct: 143 KYNANSELD 151
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 YQASSEIEE 10
Y+A E+EE
Sbjct: 1706 YEAFDEMEE 1714
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 YQASSEIEE 10
Y+A E+EE
Sbjct: 1706 YEAFDEMEE 1714
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 YQASSEIEE 10
Y+A E+EE
Sbjct: 1706 YEAFDEMEE 1714
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 YQASSEIEE 10
Y+A E+EE
Sbjct: 1706 YEAFDEMEE 1714
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 YQASSEIEE 10
Y+A E+EE
Sbjct: 1706 YEAFDEMEE 1714
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 YQASSEIEE 10
Y+A E+EE
Sbjct: 1706 YEAFDEMEE 1714
91|SequenceR|460|451|LAVRAKYQAS
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 2 AVRAKYQAS 10
A RA+Y+AS
Sbjct: 500 AARARYEAS 508
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 2 AVRAKYQAS 10
A RA+Y+AS
Sbjct: 500 AARARYEAS 508
92|SequenceR|465|456|RDDNELAVRA
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 NELAVR 9
NELA+R
Sbjct: 517 NELAIR 522
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 NELAVR 9
NELA+R
Sbjct: 517 NELAIR 522
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 NELAVR 9
NELA+R
Sbjct: 517 NELAIR 522
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 NELAVR 9
NELA+R
Sbjct: 517 NELAIR 522
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 NELAVR 9
NELA+R
Sbjct: 517 NELAIR 522
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 NELAVR 9
NELA+R
Sbjct: 517 NELAIR 522
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 NELAVR 9
NELA+R
Sbjct: 517 NELAIR 522
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 DDNELA 7
DDN+LA
Sbjct: 2239 DDNKLA 2244
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 DDNELA 7
DDN+LA
Sbjct: 2239 DDNKLA 2244
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 DDNELA 7
DDN+LA
Sbjct: 2239 DDNKLA 2244
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 DDNELA 7
DDN+LA
Sbjct: 2239 DDNKLA 2244
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 DDNELA 7
DDN+LA
Sbjct: 2239 DDNKLA 2244
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 DDNELA 7
DDN+LA
Sbjct: 2239 DDNKLA 2244
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 DDNELA 7
DDN+LA
Sbjct: 2239 DDNKLA 2244
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 RDDNEL 6
RDDN+L
Sbjct: 59 RDDNDL 64
93|SequenceR|470|461|KEEESRDDNE
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 EESRDDN 9
EE RDDN
Sbjct: 2379 EEKRDDN 2385
>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KEEESRDD 8
+EEE++DD
Sbjct: 240 REEEAKDD 247
>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KEEESRDD 8
+EEE++DD
Sbjct: 240 REEEAKDD 247
>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)
Query: 1 KEEESRDDNE 10
KE++SR+DN+
Sbjct: 358 KEKDSREDND 367
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 KEEESRDD 8
K+EES+D+
Sbjct: 1492 KKEESKDE 1499
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 KEEESRDD 8
K+EES+D+
Sbjct: 1484 KKEESKDE 1491
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 KEEESRDD 8
K+EES+D+
Sbjct: 1483 KKEESKDE 1490
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 KEEESRDDN 9
K SRDDN
Sbjct: 2937 KASWSRDDN 2945
94|SequenceR|475|466|QVATYKEEES
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 3 ATYKEEES 10
ATYKEE++
Sbjct: 48 ATYKEEKA 55
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 3 ATYKEEES 10
ATYKEE++
Sbjct: 48 ATYKEEKA 55
95|SequenceR|480|471|ESSNRQVATY
***** No hits found ******
96|SequenceR|485|476|SHGERESSNR
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 HGERESSNR 10
HGE SNR
Sbjct: 104 HGEHSESNR 112
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 HGERESSNR 10
HGE SNR
Sbjct: 105 HGEHSESNR 113
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 SHGERESSNR 10
SHGE + NR
Sbjct: 216 SHGESQLENR 225
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 2 HGERESSN 9
HGE SSN
Sbjct: 190 HGEIPSSN 197
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 HGERESSN 9
HGE SSN
Sbjct: 190 HGEIPSSN 197
>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SHGERESSN 9
SHG+ ++SN
Sbjct: 144 SHGDIKASN 152
>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 SHGERESSN 9
SHG+ ++SN
Sbjct: 144 SHGDIKASN 152
>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)
Query: 1 SHGERESSN 9
SHG+ ++SN
Sbjct: 144 SHGDIKASN 152
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 SHGERESSNR 10
+HGE SN+
Sbjct: 221 THGESTLSNK 230
>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SHGERESSN 9
SHG ++SN
Sbjct: 144 SHGNIKASN 152
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 HGERESSNR 10
HGE NR
Sbjct: 217 HGESHLENR 225
97|SequenceR|490|481|ERTNISHGER
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 1 ERTNISHGE 9
E +NI+HG+
Sbjct: 130 ENSNIAHGD 138
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 1 ERTNISHGE 9
E +NI+HG+
Sbjct: 158 ENSNIAHGD 166
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 1 ERTNISHG 8
E +NI+HG
Sbjct: 158 ENSNIAHG 165
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 1 ERTNISHGE 9
E +NI+H E
Sbjct: 130 ENSNIAHAE 138
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 ERTNISHGER 10
+RTN+S +R
Sbjct: 228 DRTNLSFQQR 237
>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United
Query: 5 ISHGER 10
ISHG+R
Sbjct: 216 ISHGKR 221
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 ERTNISH 7
+ TNISH
Sbjct: 323 QYTNISH 329
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ERTNISH 7
+ TNISH
Sbjct: 323 QYTNISH 329
98|SequenceR|495|486|PIYKNERTNI
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 1 PIYKNER 7
P+Y+N R
Sbjct: 433 PVYRNSR 439
>sp|VPAP_HHV7J|DNA polymerase processivity factor|Human herpesvirus 7 (strain JI)
Query: 1 PIYKNERTN 9
P+ KN+R+N
Sbjct: 176 PVTKNKRSN 184
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 PIYKNE 6
P+Y+NE
Sbjct: 84 PLYRNE 89
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 1 PIYKNER 7
P+Y+N R
Sbjct: 453 PVYRNSR 459
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 1 PIYKNER 7
P+Y+N R
Sbjct: 453 PVYRNSR 459
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 1 PIYKNER 7
P+Y+N R
Sbjct: 399 PVYRNSR 405
>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41
Query: 1 PIYKNER 7
P+Y+N R
Sbjct: 400 PVYRNSR 406
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 1 PIYKNER 7
P+Y+N R
Sbjct: 439 PVYRNSR 445
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PIYKNERTN 9
PIY R+N
Sbjct: 1971 PIYSTTRSN 1979
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 1 PIYKNERTNI 10
P+++ E TNI
Sbjct: 296 PVFEEEVTNI 305
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PIYKNERTN 9
P+Y R+N
Sbjct: 1968 PVYSTTRSN 1976
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 2 IYKNER 7
+Y+NER
Sbjct: 317 VYRNER 322
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 1 PIYKNERTNI 10
P+++ E TNI
Sbjct: 296 PVFEEEVTNI 305
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 1 PIYKNERTNI 10
P+++ E TNI
Sbjct: 296 PVFEEEVTNI 305
>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2
Query: 2 IYKNER 7
+Y+NER
Sbjct: 317 VYRNER 322
>sp|E1A_ADE40|EARLY E1A protein|Human adenovirus F serotype 40
Query: 1 PIYKNERTN 9
P Y NE N
Sbjct: 123 PTYVNENEN 131
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 4 KNERTNI 10
KN R+NI
Sbjct: 1438 KNRRSNI 1444
99|SequenceR|500|491|NRQGPPIYKN
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 QGPPIYK 9
QGPPIY+
Sbjct: 1437 QGPPIYR 1443
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 QGPPIYK 9
QGPPIY+
Sbjct: 1431 QGPPIYR 1437
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 QGPPIYK 9
QGPPIY+
Sbjct: 1445 QGPPIYR 1451
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 QGPPIYK 9
QGPPIY+
Sbjct: 1427 QGPPIYR 1433
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 QGPPIYK 9
QGPPIY+
Sbjct: 1439 QGPPIYR 1445
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 QGPPIYK 9
QGPPIY+
Sbjct: 1429 QGPPIYR 1435
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 QGPPIYK 9
QGPPIY+
Sbjct: 1426 QGPPIYR 1432
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 QGPPIYK 9
QGPP+Y+
Sbjct: 1427 QGPPVYR 1433
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 QGPPIYK 9
QGPP+Y+
Sbjct: 1447 QGPPVYR 1453
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 QGPPIYK 9
QGPP+Y+
Sbjct: 1435 QGPPVYR 1441
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 QGPPIYK 9
QGPP+Y+
Sbjct: 1438 QGPPVYR 1444
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 QGPPIYK 9
QGPP+Y+
Sbjct: 1428 QGPPVYR 1434
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 QGPPIYK 9
QGPP+Y+
Sbjct: 1428 QGPPVYR 1434
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 QGPPIYK 9
QGPP+Y+
Sbjct: 1429 QGPPVYR 1435
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 QGPPIYK 9
QGPP+Y+
Sbjct: 1429 QGPPVYR 1435
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 QGPPIYK 9
QGPP+Y+
Sbjct: 1440 QGPPLYR 1446
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 GPPIYKN 10
GPP+Y +
Sbjct: 446 GPPVYTD 452
>sp|ADP_ADE02|ADENOVIRUS death protein|Human adenovirus C serotype 2
Query: 2 RQGPPIYK 9
R PPIY+
Sbjct: 66 RARPPIYR 73
>sp|E311_ADE06|EARLY E3A 11.6 kDa glycoprotein|Human adenovirus C serotype 6
Query: 2 RQGPPIYK 9
R PPIY+
Sbjct: 66 RARPPIYR 73
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 RQGPPIY 8
RQG P+Y
Sbjct: 331 RQGLPVY 337
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 3 QGPPIYK 9
+GP IYK
Sbjct: 63 KGPDIYK 69
>sp|TRX2_HHV6Z|TRIPLEX capsid protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 NRQGPPIYKN 10
NR IYKN
Sbjct: 287 NRMATCIYKN 296
>sp|TRX2_HHV6U|TRIPLEX capsid protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 NRQGPPIYKN 10
NR IYKN
Sbjct: 287 NRMATCIYKN 296
>sp|E311_ADE05|EARLY E3A 10.5 kDa glycoprotein|Human adenovirus C serotype 5
Query: 2 RQGPPIY 8
R PPIY
Sbjct: 59 RARPPIY 65
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 NRQGPPIY 8
+RQG P Y
Sbjct: 522 DRQGVPTY 529
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 4 GPPIYK 9
GP IYK
Sbjct: 64 GPDIYK 69
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 2 RQGPPIYK 9
R G PIY+
Sbjct: 91 RTGGPIYR 98
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 4 GPPIYK 9
GPP Y+
Sbjct: 273 GPPCYQ 278
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 1 NRQGPPIY 8
+RQG P Y
Sbjct: 522 DRQGVPTY 529
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 4 GPPIYK 9
GPP Y+
Sbjct: 273 GPPCYQ 278
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 RQGPPIYK 9
+QG IYK
Sbjct: 2607 KQGTQIYK 2614
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 RQGPPIYK 9
+QG IYK
Sbjct: 2607 KQGTQIYK 2614
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 4 GPPIYKN 10
GP IYK+
Sbjct: 2117 GPEIYKD 2123
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 RQGPPIYK 9
+ G PIYK
Sbjct: 91 KTGGPIYK 98
100|SequenceR|505|496|SIVERNRQGP
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 2 IVERNRQG 9
IV RNR+G
Sbjct: 189 IVNRNREG 196
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 2 IVERNRQG 9
IV RNR+G
Sbjct: 189 IVNRNREG 196
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 699 SIVNRVRQG 707
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 715 SIVNRVRQG 723
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 704 SIVNRVRQG 712
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 691 SIVNRVRQG 699
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 689 SIVNRVRQG 697
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 709 SIVNRVRQG 717
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 712 SIVNRVRQG 720
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 699 SIVNRVRQG 707
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 702 SIVNRVRQG 710
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SI+ R RQG
Sbjct: 697 SIINRVRQG 705
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 692 SIVNRVRQG 700
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 695 SIVNRVRQG 703
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 703 SIVNRVRQG 711
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 690 SIVNRVRQG 698
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 694 SIVNRVRQG 702
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 701 SIVNRVRQG 709
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 698 SIVNRVRQG 706
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 703 SIVNRVRQG 711
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 703 SIVNRVRQG 711
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 714 SIVNRVRQG 722
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 708 SIVNRVRQG 716
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 703 SIVNRVRQG 711
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 700 SIVNRVRQG 708
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 694 SIVNRVRQG 702
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 706 SIVNRVRQG 714
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 702 SIVNRVRQG 710
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SIV R RQG
Sbjct: 696 SIVNRVRQG 704
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 SIVERNRQGP 10
+IVER Q P
Sbjct: 117 NIVEREVQAP 126
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 SIVERNRQGP 10
+ +ER + GP
Sbjct: 53 TTIERQQHGP 62
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 1 SIVERNRQG 9
S+VE RQG
Sbjct: 255 SLVEPRRQG 263
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
S+V R RQG
Sbjct: 693 SVVNRVRQG 701
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 SIVERNRQGP 10
+ +ER + GP
Sbjct: 71 TTIERQQHGP 80
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
S+V R RQG
Sbjct: 689 SVVNRVRQG 697
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
SI+ R RQG
Sbjct: 703 SIINRVRQG 711
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 VERNRQGP 10
V+R R+GP
Sbjct: 1337 VQRPRKGP 1344
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 VERNRQGP 10
V+R R+GP
Sbjct: 1337 VQRPRKGP 1344
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 VERNRQGP 10
V+R R+GP
Sbjct: 1337 VQRPRKGP 1344
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 VERNRQGP 10
V+R R+GP
Sbjct: 1337 VQRPRKGP 1344
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 VERNRQGP 10
V+R R+GP
Sbjct: 1337 VQRPRKGP 1344
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 VERNRQGP 10
V+R R+GP
Sbjct: 1337 VQRPRKGP 1344
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 VERNRQGP 10
V+R R+GP
Sbjct: 1337 VQRPRKGP 1344
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 VERNRQGP 10
V+R R+GP
Sbjct: 1337 VQRPRKGP 1344
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 SIVERNRQG 9
+I ERN QG
Sbjct: 66 TIPERNEQG 74
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 SIVERNRQG 9
+I ERN QG
Sbjct: 66 TIPERNEQG 74
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 SIVERNRQG 9
+I ERN QG
Sbjct: 66 TIPERNEQG 74
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 SIVERNRQG 9
+I ERN QG
Sbjct: 66 TIPERNEQG 74
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 SIVERNRQ 8
S+V R+RQ
Sbjct: 201 SVVHRDRQ 208
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 1 SIVERNRQ 8
S+V R+RQ
Sbjct: 201 SVVHRDRQ 208
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
S+V R RQG
Sbjct: 690 SVVNRVRQG 698
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
S+V R RQG
Sbjct: 703 SVVNRVRQG 711
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
S+V R RQG
Sbjct: 703 SVVNRVRQG 711
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIVERNRQG 9
S+V R RQG
Sbjct: 698 SVVNRVRQG 706
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 IVERNRQG 9
IVER R+G
Sbjct: 1932 IVERLREG 1939
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 IVERNRQG 9
IVER R+G
Sbjct: 1932 IVERLREG 1939
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I82A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Camel/Mongolia/1982
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 6 IPERNEQG 13
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 66 IPERNEQG 73
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 60 IPERNEQG 67
>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 61 IPERNEQG 68
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 59 IPERNEQG 66
>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 IVERNRQG 9
I ERN QG
Sbjct: 67 IPERNEQG 74
101|SequenceR|510|501|RGSGWSIVER
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 GSGWSIVE 9
GSGWS+ E
Sbjct: 3268 GSGWSLTE 3275
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 RGSGWSIV 8
R GWSIV
Sbjct: 684 RQKGWSIV 691
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 RGSGWSIV 8
R GWSIV
Sbjct: 684 RQKGWSIV 691
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 GSGWSIVE 9
GSGWS+ E
Sbjct: 3266 GSGWSLRE 3273
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 GSGWSIVE 9
GSGWS+ E
Sbjct: 3268 GSGWSLRE 3275
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 1 RGSGWSIVE 9
R GW IVE
Sbjct: 17 RAGGWFIVE 25
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3232 QGAGWSLKE 3240
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3232 QGAGWSLRE 3240
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3232 QGAGWSLRE 3240
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3232 QGAGWSLRE 3240
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3230 QGAGWSLRE 3238
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3230 QGAGWSLRE 3238
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3232 QGAGWSLRE 3240
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3230 QGAGWSLRE 3238
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3233 QGAGWSLRE 3241
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 GSGWSIVE 9
G+GWSI E
Sbjct: 3265 GAGWSIRE 3272
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3230 QGAGWSLKE 3238
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3233 QGAGWSLRE 3241
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3233 QGAGWSLKE 3241
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 GSGWSIVE 9
G+GWSI E
Sbjct: 3265 GAGWSIRE 3272
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 GSGWSIVE 9
G+GWSI E
Sbjct: 3261 GAGWSIRE 3268
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3233 QGAGWSLRE 3241
>sp|PG163_VACCC|PROTEIN OPG163|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GSGWSIVE 9
G+GW I++
Sbjct: 160 GNGWIIID 167
>sp|PG163_MONPV|PROTEIN OPG163|Monkeypox virus (MPXV)
Query: 2 GSGWSIVE 9
G+GW I++
Sbjct: 160 GNGWIIID 167
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3233 QGAGWSLRE 3241
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3233 QGAGWSLRE 3241
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3234 QGAGWSLRE 3242
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 1 RGSGWSIVE 9
R GW +VE
Sbjct: 18 RAGGWFLVE 26
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3234 QGAGWSLRE 3242
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 3 SGWSIVE 9
SGW +VE
Sbjct: 15 SGWFVVE 21
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 1 RGSGWSIVE 9
R GW +VE
Sbjct: 18 RAGGWFLVE 26
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 3 SGWSIVE 9
SGW +VE
Sbjct: 13 SGWFLVE 19
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3230 QGAGWSLRE 3238
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3233 QGAGWSLRE 3241
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 3 SGWSIVE 9
SGW +VE
Sbjct: 15 SGWFLVE 21
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RGSGWSIVE 9
+G+GWS+ E
Sbjct: 3230 QGAGWSLRE 3238
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 RGSGWSI 7
+GS WSI
Sbjct: 1734 QGSQWSI 1740
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 3 SGWSIVE 9
SGW +VE
Sbjct: 15 SGWFLVE 21
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 RGSGWSI 7
+GS WSI
Sbjct: 1733 QGSHWSI 1739
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 1 RGSGWSIVER 10
RG+ W + +R
Sbjct: 354 RGTHWCVFDR 363
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 1 RGSGWS 6
RG GW+
Sbjct: 212 RGGGWA 217
>sp|VB10_VACCA|KELCH repeat protein B10|Vaccinia virus (strain Ankara) (VACV)
Query: 5 WSIVE 9
WSI+E
Sbjct: 57 WSIIE 61
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 2 GSGWSIV 8
G GWS +
Sbjct: 314 GDGWSYI 320
>sp|VB10_VACCT|KELCH repeat protein B10|Vaccinia virus (strain Tian Tan)
Query: 5 WSIVE 9
WSI+E
Sbjct: 57 WSIIE 61
>sp|VB10_VACCC|KELCH repeat protein B10|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 WSIVE 9
WSI+E
Sbjct: 57 WSIIE 61
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 GSGWSIVE 9
G+GW++ E
Sbjct: 3272 GAGWNVKE 3279
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 2 GSGWS 6
G GWS
Sbjct: 99 GQGWS 103
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 GSGWSI 7
GSGW++
Sbjct: 3277 GSGWNV 3282
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 GSGWSIVE 9
G GWS+ E
Sbjct: 3255 GCGWSVRE 3262
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 GSGWSIVE 9
G GWS+ E
Sbjct: 3255 GCGWSVRE 3262
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 GSGWSIVE 9
G GWS+ E
Sbjct: 3257 GCGWSVRE 3264
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 GSGWSIVE 9
G GWS+ E
Sbjct: 3255 GCGWSVRE 3262
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 GSGWSIVE 9
G GWS+ E
Sbjct: 3257 GCGWSVRE 3264
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 GSGWSIVE 9
G GWS+ E
Sbjct: 3255 GCGWSVRE 3262
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 GSGWSIVE 9
G GWS+ E
Sbjct: 3255 GCGWSVRE 3262
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 GSGWSIVE 9
G GWS+ E
Sbjct: 3255 GCGWSVRE 3262
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 GSGWSIVE 9
G GWS+ E
Sbjct: 3256 GCGWSVRE 3263
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RGSGW 5
RG GW
Sbjct: 43 RGGGW 47
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RGSGW 5
RG GW
Sbjct: 43 RGGGW 47
>sp|VCP_VACCC|COMPLEMENT control protein C3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GSGWSI 7
G+GW++
Sbjct: 72 GTGWTL 77
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 GSGWSI 7
GSGW++
Sbjct: 3277 GSGWNV 3282
102|SequenceR|515|506|RPSNQRGSGW
>sp|VME1_CVHOC|MEMBRANE protein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 PSNQRGSG 9
PS Q+GSG
Sbjct: 213 PSTQKGSG 220
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 PSNQRGSG 9
PSN+RG G
Sbjct: 2503 PSNKRGGG 2510
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 5 QRGSGW 10
QRGS W
Sbjct: 416 QRGSSW 421
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 1 RPSNQRGSGW 10
+P N G GW
Sbjct: 398 KPDNGGGGGW 407
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 373 SNEQGSGY 380
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 369 SNEQGSGY 376
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 373 SNEQGSGY 380
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 369 SNEQGSGY 376
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 373 SNEQGSGY 380
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 373 SNEQGSGY 380
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 372 SNEQGSGY 379
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 373 SNEQGSGY 380
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 373 SNEQGSGY 380
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 373 SNEQGSGY 380
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 371 SNEQGSGY 378
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 373 SNEQGSGY 380
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RPSNQRGSGW 10
+P N R GW
Sbjct: 2618 KPMNVRSLGW 2627
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 373 SNEQGSGY 380
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 373 SNEQGSGY 380
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 362 SNEQGSGY 369
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 5 QRGSGW 10
QRGS W
Sbjct: 2032 QRGSYW 2037
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 362 SNEQGSGY 369
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 365 SNEQGSGY 372
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 5 QRGSGW 10
QRGS W
Sbjct: 2032 QRGSYW 2037
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 362 SNEQGSGY 369
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 SNQRGSGW 10
SN++GSG+
Sbjct: 362 SNEQGSGY 369
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 1 RPSNQRGSG 9
RP ++ GSG
Sbjct: 138 RPEDEGGSG 146
>sp|VPR_HV1MV|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 2 PSNQRGSG 9
PSN RG G
Sbjct: 85 PSNTRGRG 92
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 RPSNQRGSG 9
RP ++ GSG
Sbjct: 140 RPDDEGGSG 148
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 RPSNQRGSG 9
RP ++ GSG
Sbjct: 138 RPDDEGGSG 146
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 RPSNQRGSG 9
RP ++ GSG
Sbjct: 140 RPDDEGGSG 148
>sp|REX_HTL32|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 1 RPSNQRGS 8
RP NQR S
Sbjct: 11 RPKNQRPS 18
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 2 PSNQRGSG 9
PS+Q G G
Sbjct: 137 PSSQDGGG 144
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 RPSNQRG 7
RPS +RG
Sbjct: 98 RPSKKRG 104
>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)
Query: 1 RPSNQRGSG 9
RP +RGSG
Sbjct: 501 RPRKRRGSG 509
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 RPSNQRGSGW 10
RP++++ W
Sbjct: 1082 RPASKQSDSW 1091
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 1 RPSNQRGSGW 10
RP+ + G GW
Sbjct: 60 RPAARPGFGW 69
103|SequenceR|520|511|GPQGMRPSNQ
>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 PQGMRPSN 9
PQ RP N
Sbjct: 158 PQAYRPPN 165
>sp|HBEAG_HBVC1|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 PQGMRPSN 9
PQ RP N
Sbjct: 158 PQAYRPPN 165
>sp|CAPSD_HBVC1|CAPSID protein|Hepatitis B virus genotype C
Query: 2 PQGMRPSN 9
PQ RP N
Sbjct: 129 PQAYRPPN 136
>sp|CAPSD_HBVD7|CAPSID protein|Hepatitis B virus genotype D
Query: 2 PQGMRPSN 9
PQ RP N
Sbjct: 129 PQAYRPPN 136
>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PQGMRPSN 9
P+G RP N
Sbjct: 104 PEGNRPRN 111
>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 PQGMRPSN 9
P+G RP N
Sbjct: 104 PEGNRPRN 111
>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 PQGMRPS 8
PQ RPS
Sbjct: 147 PQNQRPS 153
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 PQGMRP 7
PQG RP
Sbjct: 314 PQGRRP 319
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 GPQGMRPSN 9
GP+G +P N
Sbjct: 436 GPRGKKPRN 444
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|CAP6_ADE02|PRE-PROTEIN VI|Human adenovirus C serotype 2
Query: 1 GPQGMRP 7
GP+ MRP
Sbjct: 217 GPRSMRP 223
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 PQGMRPSNQ 10
P G +P N+
Sbjct: 775 PYGQQPQNR 783
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 PQGMRPS 8
P+G RPS
Sbjct: 100 PRGSRPS 106
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 GPQGMRPSN 9
GP G +P N
Sbjct: 436 GPWGKKPRN 444
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 GPQGMRPSN 9
GP G +P N
Sbjct: 436 GPWGKKPRN 444
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 GPQGMRPSN 9
GP G +P N
Sbjct: 435 GPWGKKPRN 443
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 GPQGMRPSN 9
GP G +P N
Sbjct: 436 GPWGKKPRN 444
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 GPQGMRPSN 9
GP G +P N
Sbjct: 437 GPWGKKPRN 445
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 GPQGMRPSN 9
GP+G +P N
Sbjct: 436 GPRGKQPRN 444
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 GPQGMRPSN 9
GP G +P N
Sbjct: 436 GPWGKKPRN 444
104|SequenceR|525|516|PMSGSGPQGM
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 1 PMSGSGPQG 9
P+SGSG QG
Sbjct: 317 PLSGSGMQG 325
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PMSGSGPQG 9
P +GSGP G
Sbjct: 4 PAAGSGPDG 12
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PMSGSGPQG 9
P +GSGP G
Sbjct: 4 PAAGSGPDG 12
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 1 PMSGSGPQGM 10
P S GP GM
Sbjct: 66 PESRPGPSGM 75
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 1 PMSGSGPQGM 10
P S GP GM
Sbjct: 65 PESRPGPSGM 74
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 4 GSGPQG 9
GSGP G
Sbjct: 932 GSGPNG 937
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 5 SGPQGM 10
SGPQG+
Sbjct: 118 SGPQGL 123
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GSGPQG 9
G GP+G
Sbjct: 418 GDGPEG 423
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GSGPQG 9
G GP+G
Sbjct: 418 GDGPEG 423
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PMSGSGPQGM 10
PM G PQ +
Sbjct: 669 PMPGESPQAV 678
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PMSGSGPQGM 10
PM G PQ +
Sbjct: 670 PMPGESPQAV 679
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 PMSGSGPQGM 10
PMSG QG+
Sbjct: 53 PMSGGRKQGI 62
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PMSGSGPQGM 10
PM G PQ +
Sbjct: 666 PMPGESPQAV 675
105|SequenceR|530|521|STSRSPMSGS
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 TSRSPMSG 9
T R PM G
Sbjct: 498 TRRGPMQG 505
106|SequenceR|535|526|FDSTHSTSRS
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 FDSTHSTS 8
FD++HSTS
Sbjct: 1903 FDASHSTS 1910
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 FDSTHSTS 8
FDSTHS +
Sbjct: 2071 FDSTHSVA 2078
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 1 FDSTHSTS 8
FDSTHS +
Sbjct: 2071 FDSTHSVA 2078
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 FDSTHSTS 8
FDSTHS +
Sbjct: 2069 FDSTHSVA 2076
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 FDSTHSTS 8
FDSTHS +
Sbjct: 2071 FDSTHSVA 2078
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 FDSTHSTS 8
FDSTHS +
Sbjct: 2072 FDSTHSVA 2079
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 FDSTHSTS 8
FD++HST+
Sbjct: 2073 FDASHSTA 2080
>sp|A28_YMTV5|ENVELOPE protein A28 homolog|Yaba monkey tumor virus (strain
Query: 1 FDSTHST 7
F+STHST
Sbjct: 36 FNSTHST 42
>sp|GI_HHV11|ENVELOPE glycoprotein I|Human herpesvirus 1 (strain 17)
Query: 2 DSTHSTS 8
DSTHS +
Sbjct: 112 DSTHSPA 118
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 DSTHSTSR 9
D+T+ TSR
Sbjct: 183 DTTNGTSR 190
107|SequenceR|540|531|GSNPNFDSTH
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 5 NFDSTH 10
NFDSTH
Sbjct: 2068 NFDSTH 2073
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 5 NFDSTH 10
NFDSTH
Sbjct: 2070 NFDSTH 2075
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 5 NFDSTH 10
NFDSTH
Sbjct: 2070 NFDSTH 2075
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 5 NFDSTH 10
NFDSTH
Sbjct: 2071 NFDSTH 2076
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 5 NFDSTH 10
NFDSTH
Sbjct: 2070 NFDSTH 2075
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SNPNFD 7
SNPN D
Sbjct: 115 SNPNVD 120
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 2 SNPNFD 7
SNPN D
Sbjct: 115 SNPNID 120
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 SNPNFDS 8
S+PN+D+
Sbjct: 3297 SDPNYDA 3303
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 SNPNFDS 8
S+PN+D+
Sbjct: 3297 SDPNYDA 3303
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 SNPNFDST 9
++PN DST
Sbjct: 331 TSPNVDST 338
>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GSNPNFDS 8
GSNP F++
Sbjct: 473 GSNPKFEN 480
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 2 SNPNF 6
SNPNF
Sbjct: 63 SNPNF 67
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 GSNPNF 6
G+NPN+
Sbjct: 408 GTNPNW 413
Query: 1 GSNPNF 6
GSN NF
Sbjct: 2039 GSNDNF 2044
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 2 SNPNF 6
SNPNF
Sbjct: 62 SNPNF 66
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 2 SNPNF 6
SNPNF
Sbjct: 62 SNPNF 66
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 SNPNFDSTH 10
++ NFD TH
Sbjct: 326 TSANFDGTH 334
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SNPNFDSTH 10
++ NFD TH
Sbjct: 326 TSANFDGTH 334
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 2 SNPNFDSTH 10
++ NFD TH
Sbjct: 326 TSANFDGTH 334
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 SNPNF 6
SNPNF
Sbjct: 62 SNPNF 66
>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GSNPNFDS 8
GSNP F++
Sbjct: 473 GSNPKFEN 480
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 2 SNPNFDSTH 10
++ NFD TH
Sbjct: 326 TSANFDGTH 334
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 SNPNFDSTH 10
++ NFD TH
Sbjct: 326 TSANFDGTH 334
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 2 SNPNFDSTH 10
++ NFD TH
Sbjct: 326 TSANFDGTH 334
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 3 NPNFDS 8
NPN+D+
Sbjct: 299 NPNYDT 304
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 4 PNFDSTH 10
PN DS H
Sbjct: 418 PNTDSAH 424
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 1 GSNPNFDST 9
GS P DST
Sbjct: 45 GSTPGEDST 53
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 GSNPNFDST 9
GS P DST
Sbjct: 45 GSTPGEDST 53
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 3 NPNFDSTH 10
N N D+TH
Sbjct: 325 NSNEDATH 332
108|SequenceR|545|536|VRQDSGSNPN
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 QDSGSNPN 10
QDS NPN
Sbjct: 332 QDSPMNPN 339
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 4 DSGSNP 9
DSG+NP
Sbjct: 56 DSGTNP 61
>sp|NSP4_ROTHO|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 4 DSGSNP 9
DSG NP
Sbjct: 160 DSGKNP 165
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 QDSGSNPN 10
QDS NPN
Sbjct: 332 QDSPINPN 339
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 QDSGSNPN 10
QDS NPN
Sbjct: 332 QDSPINPN 339
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 4 DSGSNP 9
DSG+NP
Sbjct: 56 DSGTNP 61
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 4 DSGSNP 9
DSG+NP
Sbjct: 56 DSGTNP 61
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 3 QDSGSNPN 10
D G NPN
Sbjct: 326 HDKGINPN 333
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 3 QDSGSNPN 10
D G NPN
Sbjct: 326 HDKGINPN 333
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 3 QDSGSNPN 10
D G NPN
Sbjct: 326 HDKGINPN 333
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 QDSGSNPN 10
QD G PN
Sbjct: 875 QDKGQKPN 882
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 QDSGSNPN 10
QD G PN
Sbjct: 876 QDKGQKPN 883
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 QDSGSNPN 10
QD G PN
Sbjct: 876 QDKGQKPN 883
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VRQDSGSNP 9
+R+DSG+ P
Sbjct: 379 LRRDSGALP 387
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 VRQDSGSN 8
+RQD GS+
Sbjct: 1198 LRQDPGSS 1205
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 VRQDSGSN 8
+RQD GS+
Sbjct: 1199 LRQDPGSS 1206
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 VRQDSGSN 8
+RQD GS+
Sbjct: 1198 LRQDPGSS 1205
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 RQDSGSN 8
RQ+ GSN
Sbjct: 2239 RQEMGSN 2245
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 RQDSGSN 8
RQ+ GSN
Sbjct: 2239 RQEMGSN 2245
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 6 GSNPN 10
GSNPN
Sbjct: 31 GSNPN 35
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 RQDSGSN 8
RQ+ GSN
Sbjct: 2240 RQEMGSN 2246
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 RQDSGSN 8
RQ+ GSN
Sbjct: 2240 RQEMGSN 2246
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VRQDSGSNPN 10
+R +GS PN
Sbjct: 235 LRHPAGSGPN 244
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VRQDSGSNPN 10
+R +GS PN
Sbjct: 235 LRHPAGSGPN 244
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 RQDSGSN 8
RQ+ GSN
Sbjct: 2242 RQEMGSN 2248
109|SequenceR|550|541|VGGNVVRQDS
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 GNVVRQD 9
GNV RQD
Sbjct: 4174 GNVSRQD 4180
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 2 GGNVVRQ 8
GGN VRQ
Sbjct: 588 GGNPVRQ 594
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 2 GGNVVRQ 8
GGN VRQ
Sbjct: 588 GGNPVRQ 594
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 2 GGNVVRQ 8
GGN VRQ
Sbjct: 588 GGNPVRQ 594
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 2 GGNVVRQ 8
GGN VRQ
Sbjct: 588 GGNPVRQ 594
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 VGGNVVRQ 8
V GNVV+Q
Sbjct: 2146 VTGNVVKQ 2153
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 VGGNVVRQ 8
V GNVV+Q
Sbjct: 2146 VTGNVVKQ 2153
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 1 VGGNVVRQ 8
+GGN+V Q
Sbjct: 292 LGGNLVHQ 299
110|SequenceR|555|546|PSPWPVGGNV
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 PSPWPVGG 8
P PWP G
Sbjct: 243 PKPWPKEG 250
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 SPWPVGGN 9
+P P+GGN
Sbjct: 1261 TPIPLGGN 1268
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 1 PSPWPVGG 8
P PWP G
Sbjct: 204 PLPWPRGA 211
>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 1 PSPWPVG 7
P+ WP G
Sbjct: 292 PTAWPAG 298
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSPWPVG 7
PSP PVG
Sbjct: 1483 PSPPPVG 1489
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 1 PSPWPVG 7
P+ WP G
Sbjct: 292 PTAWPAG 298
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSPWPVG 7
PSP PVG
Sbjct: 1483 PSPPPVG 1489
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSPWPVG 7
PSP PVG
Sbjct: 1483 PSPPPVG 1489
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSPWPVG 7
PSP PVG
Sbjct: 1483 PSPPPVG 1489
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSPWPVG 7
PSP PVG
Sbjct: 1073 PSPPPVG 1079
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PSPWPVGG 8
P PWP G
Sbjct: 204 PLPWPRGA 211
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 1 PSPWPVGGN 9
P P PVG +
Sbjct: 627 PPPSPVGAD 635
>sp|PG130_VARV|39KDA core protein OPG130|Variola virus
Query: 2 SPWPVGGNV 10
+P P GG V
Sbjct: 189 TPTPTGGTV 197
>sp|PG130_VAR67|39KDA core protein OPG130|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 SPWPVGGNV 10
+P P GG V
Sbjct: 189 TPTPTGGTV 197
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 2 SPWPVGGN 9
SP P G N
Sbjct: 539 SPKPTGNN 546
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSPWPVG 7
PSP P+G
Sbjct: 1483 PSPPPMG 1489
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSPWPVG 7
PSP P+G
Sbjct: 1483 PSPPPMG 1489
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 PSPWPVG 7
PSP P+G
Sbjct: 1483 PSPPPMG 1489
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PSPWP 5
P PWP
Sbjct: 2725 PRPWP 2729
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PSPWPVG 7
P+P PVG
Sbjct: 255 PNPVPVG 261
>sp|NCAP_CVHOC|NUCLEOPROTEIN coronavirus OC43 (HCoV-OC43)
Query: 2 SPWPVGGNV 10
S P GGNV
Sbjct: 51 SQQPSGGNV 59
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 PSPWP 5
P PWP
Sbjct: 2698 PRPWP 2702
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 2 SPWPVGG 8
PW VGG
Sbjct: 344 QPWNVGG 350
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 PSPWP 5
P PWP
Sbjct: 2703 PRPWP 2707
>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)
Query: 2 SPWPVGGNV 10
+P P GG V
Sbjct: 199 TPTPTGGTV 207
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 SPWPVG 7
S WPVG
Sbjct: 242 STWPVG 247
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 SPWPVG 7
S WPVG
Sbjct: 242 STWPVG 247
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 SPWPVG 7
S WPVG
Sbjct: 242 STWPVG 247
111|SequenceR|560|551|SPSPCPSPWP
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 5 CPSPWP 10
C SPWP
Sbjct: 88 CSSPWP 93
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain
Query: 5 CPSPWP 10
C SPWP
Sbjct: 88 CSSPWP 93
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 2 PSPCPSP 8
P PCP P
Sbjct: 767 PKPCPEP 773
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 2 PSPCPSP 8
P PCP P
Sbjct: 768 PKPCPEP 774
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 2 PSPCPSP 8
P PCP P
Sbjct: 767 PKPCPEP 773
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 2 PSPCPSP 8
P PCP P
Sbjct: 768 PKPCPEP 774
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 1 SPSPCPSPW 9
+ PCP P+
Sbjct: 576 ASDPCPDPF 584
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 4 PCPSP 8
PCP P
Sbjct: 461 PCPKP 465
>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 5 CPSPWP 10
CP+ WP
Sbjct: 291 CPTAWP 296
>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 2 PSPCP 6
P PCP
Sbjct: 14 PVPCP 18
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 5 CPSPWP 10
CP+ WP
Sbjct: 291 CPTAWP 296
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 2 PSPCPSP 8
P P PSP
Sbjct: 50 PPPVPSP 56
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 2 PSPCPSP 8
P P PSP
Sbjct: 50 PPPVPSP 56
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SPSPCPS 7
SP+PC +
Sbjct: 34 SPTPCST 40
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 SPSPCPSP 8
SPSP P+P
Sbjct: 416 SPSPTPNP 423
Query: 1 SPSPCPSPWP 10
+PS PSP P
Sbjct: 227 APSKIPSPLP 236
>sp|HBZ_HTL1L|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 2 PSPCP 6
P PCP
Sbjct: 14 PVPCP 18
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 SPSPCPSPWP 10
SP P PWP
Sbjct: 2698 SPGTSPRPWP 2707
>sp|UL91_HCMVM|PROTEIN UL91|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PCPSPWP 10
PCPSP P
Sbjct: 84 PCPSPVP 90
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SPSPCPSPWP 10
SP P PWP
Sbjct: 2720 SPGTSPRPWP 2729
>sp|UL91_HCMVA|PROTEIN UL91|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PCPSPWP 10
PCPSP P
Sbjct: 84 PCPSPVP 90
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 SPSPCPSPWP 10
SP P PWP
Sbjct: 2693 SPGSSPRPWP 2702
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 4 PCPSPW 9
PC SPW
Sbjct: 746 PCQSPW 751
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 4 PCPSP 8
PCP P
Sbjct: 457 PCPLP 461
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 4 PCPSPW 9
PC SPW
Sbjct: 746 PCQSPW 751
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 4 PCPSPW 9
PC SPW
Sbjct: 746 PCQSPW 751
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PCPSPWP 10
PC WP
Sbjct: 103 PCVDRWP 109
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PCPSPWP 10
PC WP
Sbjct: 103 PCVDRWP 109
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 4 PCPSPWP 10
PC P P
Sbjct: 2075 PCTEPTP 2081
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 4 PCPSP 8
PCP P
Sbjct: 453 PCPLP 457
>sp|PG130_VARV|39KDA core protein OPG130|Variola virus
Query: 2 PSPCPSPWP 10
P+P P+P P
Sbjct: 84 PTPAPTPKP 92
>sp|PG130_VAR67|39KDA core protein OPG130|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 PSPCPSPWP 10
P+P P+P P
Sbjct: 84 PTPAPTPKP 92
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 3 SPCPSPWP 10
PCPSP P
Sbjct: 174 EPCPSPAP 181
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 SPCPSPW 9
SPC PW
Sbjct: 351 SPCALPW 357
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 SPCPSPW 9
SPC PW
Sbjct: 353 SPCALPW 359
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 SPCPSPW 9
SPC PW
Sbjct: 351 SPCALPW 357
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 SPCPSPW 9
SPC PW
Sbjct: 353 SPCALPW 359
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 2 PSPCP 6
P PCP
Sbjct: 111 PRPCP 115
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 4 PCPSP 8
PCP P
Sbjct: 448 PCPLP 452
>sp|VIE3_HCMVT|30 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 2 PSPCPSPW 9
PSP PS W
Sbjct: 268 PSPLPSSW 275
>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P
Query: 1 SPSPCPSPW 9
SP+PC W
Sbjct: 251 SPTPCDVSW 259
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PSPCPSP 8
PSP P P
Sbjct: 214 PSPGPMP 220
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 SPCPSPW 9
+P PSPW
Sbjct: 489 TPSPSPW 495
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 SPSPC 5
SP PC
Sbjct: 1513 SPKPC 1517
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 SPSPC 5
SP PC
Sbjct: 1513 SPKPC 1517
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PSPCPSP 8
PSP P P
Sbjct: 214 PSPGPMP 220
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SPSPCPSPWP 10
+PS +PWP
Sbjct: 589 APSHAQTPWP 598
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 SPSPC 5
SP PC
Sbjct: 1513 SPKPC 1517
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 SPCPSP 8
+PCPSP
Sbjct: 2077 TPCPSP 2082
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 2 PSPCPSP 8
P+P P+P
Sbjct: 320 PTPSPAP 326
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 SPSPC 5
SP PC
Sbjct: 1513 SPKPC 1517
112|SequenceR|565|556|SPPRSSPSPC
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PRSSPSP 9
PR +PSP
Sbjct: 656 PRRTPSP 662
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 2 PPRSSPSPC 10
PPR +PC
Sbjct: 310 PPRLRSTPC 318
>sp|REV_HV2KR|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 3 PRSSPSPC 10
PRS+P PC
Sbjct: 120 PRSAPGPC 127
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 1 SPPRSSPSP 9
SPP+ P P
Sbjct: 447 SPPKEKPDP 455
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 2 PPRSSPSPC 10
PPR +PC
Sbjct: 307 PPRLRSTPC 315
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 3 PRSSPSP 9
PR +PSP
Sbjct: 1118 PRETPSP 1124
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 3 PRSSPSP 9
PR +PSP
Sbjct: 1118 PRETPSP 1124
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 SPPRSSPSP 9
+PP SSP P
Sbjct: 443 TPPGSSPGP 451
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 2 PPRSSPSPC 10
PP+ +PC
Sbjct: 308 PPKIRSAPC 316
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 2 PPRSSPSPC 10
PP+ PC
Sbjct: 308 PPKIRSGPC 316
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PPRSSPSP 9
PP SSP P
Sbjct: 631 PPFSSPWP 638
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 PRSSPSPC 10
PRSS PC
Sbjct: 206 PRSSVGPC 213
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 3 PRSSPSPC 10
PRSS PC
Sbjct: 206 PRSSVGPC 213
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 PRSSPSPC 10
PRSS PC
Sbjct: 206 PRSSVGPC 213
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 PRSSPSPC 10
PRSS PC
Sbjct: 206 PRSSVGPC 213
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 PRSSPSPC 10
PRSS PC
Sbjct: 206 PRSSVGPC 213
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 PRSSPSPC 10
PRSS PC
Sbjct: 206 PRSSVGPC 213
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 1 SPPRSSPSP 9
+PP+ P P
Sbjct: 448 NPPKEKPDP 456
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 SPPRSSP 7
+PPR+SP
Sbjct: 443 TPPRNSP 449
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 SPPRSSP 7
+PPR+SP
Sbjct: 443 TPPRNSP 449
>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P
Query: 1 SPPRSSPSP 9
S PRS PSP
Sbjct: 244 SQPRSVPSP 252
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 SPPRSSP 7
SP RS+P
Sbjct: 117 SPKRSAP 123
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 SPPRSSP 7
SP RS+P
Sbjct: 117 SPKRSAP 123
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 SPPRSSP 7
SP RS+P
Sbjct: 117 SPKRSAP 123
>sp|VP2_LORDV|MINOR capsid protein VP2|Lordsdale virus (strain GII/Human/United
Query: 1 SPPRSSPS 8
+P RSSPS
Sbjct: 150 APARSSPS 157
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 1 SPPRSSPS 8
SPP +PS
Sbjct: 719 SPPEVTPS 726
>sp|VE4_HPV18|PROTEIN E4|Human papillomavirus type 18
Query: 1 SPPRSSPSPC 10
+PP P+PC
Sbjct: 23 TPPHRIPAPC 32
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 3 PRSSP 7
PRSSP
Sbjct: 92 PRSSP 96
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 PRSSPSPC 10
PRS S C
Sbjct: 208 PRSQESKC 215
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 PRSSPSPC 10
PRS S C
Sbjct: 208 PRSQESKC 215
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 PRSSPSPC 10
PRS S C
Sbjct: 208 PRSQESKC 215
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 PPRSSPSPC 10
P RSS PC
Sbjct: 200 PSRSSVGPC 208
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SPPRSSPS 8
SPP +PS
Sbjct: 585 SPPEVTPS 592
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 3 PRSSPSPC 10
PRS S C
Sbjct: 208 PRSQESKC 215
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 PRSSPSPC 10
PRS S C
Sbjct: 208 PRSQESKC 215
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 PRSSPSPC 10
PRS S C
Sbjct: 208 PRSQESKC 215
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 PRSSPSPC 10
PRS S C
Sbjct: 208 PRSQESKC 215
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 PRSSPSPC 10
PRS S C
Sbjct: 208 PRSQESKC 215
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 PRSSPSPC 10
PRS S C
Sbjct: 208 PRSQESKC 215
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 PRSSPSPC 10
PRS S C
Sbjct: 208 PRSQESKC 215
>sp|GQ2_HHV6U|GLYCOPROTEIN Q2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PPRSSPSP 9
PP SSP P
Sbjct: 189 PPFSSPWP 196
113|SequenceR|570|561|GSQYRSPPRS
>sp|VME1_MERS1|MEMBRANE protein|Middle East respiratory syndrome-related coronavirus
Query: 4 YRSPP 8
YRSPP
Sbjct: 203 YRSPP 207
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 1 GSQYRSPPRS 10
GS++RS PRS
Sbjct: 299 GSRHRSLPRS 308
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 SQYRSPPRS 10
S R PPR+
Sbjct: 6567 SMIRGPPRA 6575
>sp|B17_VARV|PROTEIN B17|Variola virus
Query: 2 SQYRSPP 8
S YR PP
Sbjct: 231 SMYRIPP 237
>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 SQYRSPP 8
S YR PP
Sbjct: 231 SMYRIPP 237
>sp|B17_VACCC|PROTEIN B17|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SQYRSPP 8
S YR PP
Sbjct: 231 SMYRIPP 237
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 2 SQYRSPPR 9
SQ+ +PP+
Sbjct: 122 SQHSTPPK 129
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 SQYRSPPR 9
SQ+ +PP+
Sbjct: 122 SQHSTPPK 129
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GSQYRSPP 8
G QY PP
Sbjct: 504 GWQYTDPP 511
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GSQYRSPP 8
G QY PP
Sbjct: 504 GWQYTDPP 511
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GSQYRSPP 8
G QY PP
Sbjct: 504 GWQYTDPP 511
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 4 YRSPP 8
YRSPP
Sbjct: 48 YRSPP 52
>sp|VE2_HPV15|REGULATORY protein E2|Human papillomavirus 15
Query: 2 SQYRSPPRS 10
S+ R+PPR+
Sbjct: 157 SRKRTPPRT 165
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 4 YRSPP 8
YRSPP
Sbjct: 45 YRSPP 49
>sp|TAT_HV1YB|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 SQYRSPPRS 10
SQ R PP+S
Sbjct: 53 SQRRRPPKS 61
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 GSQYRS 6
GS+YRS
Sbjct: 1315 GSRYRS 1320
114|SequenceR|575|566|PLSNPGSQYR
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 SNPGSQYR 10
S PG Q+R
Sbjct: 5707 SPPGEQFR 5714
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PLSNPGSQYR 10
PL+N + YR
Sbjct: 180 PLNNGSTDYR 189
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 SNPGSQYR 10
SNP QY+
Sbjct: 32 SNPNDQYK 39
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PLSNPGSQYR 10
P +PG YR
Sbjct: 297 PGPDPGPSYR 306
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PLSNPGSQYR 10
P +PG YR
Sbjct: 297 PGPDPGPSYR 306
115|SequenceR|580|571|TAARPPLSNP
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 1 TAARPPLSNP 10
++ RPPLS+P
Sbjct: 142 SSQRPPLSSP 151
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 AARPP 6
AARPP
Sbjct: 6045 AARPP 6049
>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)
Query: 1 TAARPPLSNP 10
T RP L NP
Sbjct: 205 TVFRPQLINP 214
>sp|GLYC_HRSV8|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 1 TAARPPLSNP 10
TA+ P SNP
Sbjct: 282 TASEPSTSNP 291
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 RPPLSN 9
RPPL N
Sbjct: 543 RPPLGN 548
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 RPPLSN 9
RPPL N
Sbjct: 543 RPPLGN 548
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 RPPLSN 9
RPPL N
Sbjct: 543 RPPLGN 548
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 4 RPPLSN 9
RPPL N
Sbjct: 543 RPPLGN 548
116|SequenceR|585|576|PPRTPTAARP
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 PPRTPTAAR 9
PP+TP AR
Sbjct: 529 PPQTPPTAR 537
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 2 PRTPTAARP 10
P TPT+A P
Sbjct: 69 PATPTSANP 77
>sp|NS1_I96A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 PPRTPTAAR 9
PP TPT R
Sbjct: 212 PPLTPTQKR 220
>sp|NS1_I96A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 PPRTPTAAR 9
PP TPT R
Sbjct: 212 PPFTPTQKR 220
>sp|NS1_I00A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/New
Query: 1 PPRTPTAAR 9
PP TPT R
Sbjct: 212 PPFTPTQKR 220
>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)
Query: 2 PRTPTA 7
PRTP A
Sbjct: 106 PRTPLA 111
>sp|LRP2_HHV1F|LATENCY-RELATED protein 2|Human herpesvirus 1 (strain F)
Query: 2 PRTPTAARP 10
PRTPT A P
Sbjct: 22 PRTPTPAHP 30
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 PPRTPTAA 8
PP TP A
Sbjct: 530 PPNTPNTA 537
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PRTPTA 7
PR PTA
Sbjct: 550 PRKPTA 555
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 PPRTPTA 7
PP TP A
Sbjct: 14 PPSTPVA 20
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 1 PPRTPTA 7
PP TP A
Sbjct: 14 PPSTPVA 20
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 PPRTPTAAR 9
PP P+A R
Sbjct: 695 PPEGPSAYR 703
Query: 2 PRTPTAA 8
PR P+AA
Sbjct: 1208 PRCPSAA 1214
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 1 PPRTPTA 7
PP TP A
Sbjct: 14 PPSTPVA 20
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 PPRTPTAAR 9
PP P+A R
Sbjct: 695 PPEGPSAYR 703
Query: 2 PRTPTAA 8
PR P+AA
Sbjct: 1208 PRCPSAA 1214
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 PPRTPTAA 8
PP TP A
Sbjct: 532 PPSTPQTA 539
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 1 PPRTPTA 7
PP TP A
Sbjct: 14 PPSTPVA 20
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 PPRTPT 6
PP TPT
Sbjct: 533 PPDTPT 538
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 PPRTPTAA 8
PP TP A
Sbjct: 532 PPNTPQTA 539
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 1 PPRTP 5
PPRTP
Sbjct: 363 PPRTP 367
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 TPTAARP 10
TPT A+P
Sbjct: 155 TPTRAKP 161
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 1 PPRTPTA 7
PP TP A
Sbjct: 14 PPSTPVA 20
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 PPRTPTA 7
PP TP A
Sbjct: 43 PPSTPVA 49
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 1 PPRTPTA 7
PP TP A
Sbjct: 14 PPSTPVA 20
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 PPRTPTAARP 10
PP P+A RP
Sbjct: 141 PPGAPSAHRP 150
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 PPRTPTA 7
PP TP A
Sbjct: 14 PPSTPVA 20
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 1 PPRTPTAARP 10
PP P+A RP
Sbjct: 141 PPGAPSAHRP 150
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 1 PPRTPTA 7
PP TP A
Sbjct: 14 PPSTPVA 20
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 1 PPRTPTAARP 10
PP P+A RP
Sbjct: 141 PPGAPSAHRP 150
117|SequenceR|590|581|SPPRSPPRTP
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SPPRSPPR 8
SPP+ PPR
Sbjct: 235 SPPKLPPR 242
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SPPRSPPR 8
SPP+ PPR
Sbjct: 235 SPPKLPPR 242
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PRSPPRTP 10
PR PP P
Sbjct: 726 PRGPPDRP 733
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 1 SPPRSPP 7
SPP +PP
Sbjct: 230 SPPINPP 236
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 1 SPPRSPPRTP 10
+PPR PPR P
Sbjct: 508 APPRLPPRNP 517
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 3 PRSPPRTP 10
P+SP TP
Sbjct: 115 PKSPGETP 122
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 1 SPPRSPPRTP 10
P SPPRTP
Sbjct: 102 DPAASPPRTP 111
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 PPRSPPR 8
PP+SPPR
Sbjct: 471 PPKSPPR 477
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 1 SPPRSPP 7
SPP PP
Sbjct: 385 SPPPLPP 391
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 PPRSPPR 8
PP+SPPR
Sbjct: 471 PPKSPPR 477
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 PPRSPPR 8
PP+SPPR
Sbjct: 471 PPKSPPR 477
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 PPRSPPR 8
PP+SPPR
Sbjct: 471 PPKSPPR 477
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 PPRSPPR 8
PP+SPPR
Sbjct: 471 PPKSPPR 477
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 PPRSPPR 8
PP+SPPR
Sbjct: 471 PPKSPPR 477
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 PPRSPPR 8
PP+SPPR
Sbjct: 471 PPKSPPR 477
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 RSPPRTP 10
R P RTP
Sbjct: 654 RGPRRTP 660
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SPPRSPPRTP 10
SPP+S TP
Sbjct: 482 SPPQSGRSTP 491
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 2 PPRSPP 7
PP +PP
Sbjct: 66 PPTAPP 71
>sp|GLYC_HRSV3|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 1 SPPRSPPRTP 10
S P SPP TP
Sbjct: 287 SQPSSPPNTP 296
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPRSPPRTP 10
+PP +P TP
Sbjct: 661 APPTNPYNTP 670
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPRSPPRTP 10
+PP +P TP
Sbjct: 659 APPTNPYNTP 668
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPRSPPRTP 10
+PP +P TP
Sbjct: 661 APPTNPYNTP 670
>sp|GLYC_HRSVA|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 1 SPPRSPPRTP 10
S P SPP TP
Sbjct: 287 SQPSSPPNTP 296
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPRSPPRTP 10
+PP +P TP
Sbjct: 660 APPTNPYNTP 669
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPRSPPRTP 10
+PP +P TP
Sbjct: 662 APPTNPYNTP 671
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPRSPPRTP 10
+PP +P TP
Sbjct: 662 APPTNPYNTP 671
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPRSPPRTP 10
+PP +P TP
Sbjct: 661 APPTNPYNTP 670
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPRSPPRTP 10
+PP +P TP
Sbjct: 661 APPTNPYNTP 670
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPRSPPRTP 10
+PP +P TP
Sbjct: 661 APPTNPYNTP 670
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 5 SPPRTP 10
SPPRTP
Sbjct: 147 SPPRTP 152
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPRSPPRTP 10
+PP +P TP
Sbjct: 660 APPTNPYNTP 669
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 1 SPPRSPPR 8
SPP SPPR
Sbjct: 219 SPPVSPPR 226
>sp|VE6_HPV26|PROTEIN E6|Human papillomavirus type 26
Query: 3 PRSPPRT 9
PR PRT
Sbjct: 5 PRERPRT 11
>sp|UL130_HCMVA|UNCHARACTERIZED protein UL130|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SPPRSP 6
SPPRSP
Sbjct: 63 SPPRSP 68
>sp|UL130_HCMVM|ENVELOPE glycoprotein UL130|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SPPRSP 6
SPPRSP
Sbjct: 63 SPPRSP 68
>sp|VE2_HPV15|REGULATORY protein E2|Human papillomavirus 15
Query: 1 SPPRSPPRT 9
S R+PPRT
Sbjct: 157 SRKRTPPRT 165
118|SequenceR|595|586|PRSPRSPPRS
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 PRSPRSPP 8
PR+PR+ P
Sbjct: 819 PRAPRTMP 826
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SPRSPP 8
+PR PP
Sbjct: 725 TPRGPP 730
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 RSPRSPP 8
+SP +PP
Sbjct: 1704 KSPSAPP 1710
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SPRSPPR 9
SPR P R
Sbjct: 713 SPREPDR 719
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 PRSPRSPP 8
PR+PR+ P
Sbjct: 822 PRAPRALP 829
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 PRSPRSPP 8
PR+PR+ P
Sbjct: 822 PRAPRALP 829
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SPRSPPR 9
SPR P R
Sbjct: 699 SPRGPDR 705
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 PRSPRSPP 8
PR PR+ P
Sbjct: 821 PRPPRAVP 828
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 2 RSPRSPP 8
+ PR PP
Sbjct: 245 KRPRGPP 251
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 PRSPRSPP 8
PR PR+ P
Sbjct: 853 PRPPRAVP 860
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SPRSPPR 9
SPR P R
Sbjct: 718 SPRGPDR 724
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 PRSPRSPP 8
PR PR+ P
Sbjct: 848 PRPPRAVP 855
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 PRSPRSPP 8
PR PR+ P
Sbjct: 821 PRPPRAVP 828
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 PRSPRSPP 8
PR PR+ P
Sbjct: 848 PRPPRAVP 855
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 PRSPRSPP 8
PR PR+ P
Sbjct: 849 PRPPRAVP 856
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 PRSPRSPP 8
PR PR+ P
Sbjct: 849 PRPPRAVP 856
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 PRSPRSPPR 9
PR P SPP+
Sbjct: 27 PRGPDSPPK 35
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 PRSPRSPP 8
PR+PR PP
Sbjct: 259 PRTPRPPP 266
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 RSPRSPPR 9
R+PR+P R
Sbjct: 361 RTPRTPAR 368
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RSPRSP 7
R PRSP
Sbjct: 243 RQPRSP 248
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 RSPRSPPR 9
R+PR+P R
Sbjct: 361 RTPRTPAR 368
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 RSPRSPPR 9
R+PR+P R
Sbjct: 361 RTPRTPAR 368
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 RSPRSPPR 9
R+PR+P R
Sbjct: 361 RTPRTPAR 368
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RSPRSP 7
R PRSP
Sbjct: 243 RQPRSP 248
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 RSPRSPPR 9
R+PR+P R
Sbjct: 361 RTPRTPAR 368
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 RSPRSPPR 9
R+PR+P R
Sbjct: 361 RTPRTPAR 368
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 RSPRSPPR 9
R+PR+P R
Sbjct: 361 RTPRTPAR 368
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 2 RSPRSPPR 9
R+PR+P R
Sbjct: 361 RTPRTPAR 368
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 2 RSPRSPPR 9
R+PR+P R
Sbjct: 350 RTPRTPAR 357
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 RSPRSPPR 9
R+PR+P R
Sbjct: 361 RTPRTPAR 368
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 RSPRSPPR 9
R+PR+P R
Sbjct: 361 RTPRTPAR 368
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 RSPRSPPR 9
R+PR+P R
Sbjct: 361 RTPRTPAR 368
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 RSPRSPPR 9
R+PR+P R
Sbjct: 361 RTPRTPAR 368
119|SequenceR|600|591|SPHSPPRSPR
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 PHSPPRSPR 10
PH P + PR
Sbjct: 1439 PHKPGKQPR 1447
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PHSPPRSPR 10
P+SPP+S R
Sbjct: 480 PYSPPQSGR 488
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 2 PHSPPRSPR 10
P+SPP+S R
Sbjct: 480 PYSPPQSDR 488
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 3 HSPPRSPR 10
H+PPR R
Sbjct: 243 HAPPRKRR 250
>sp|PKG3_ADE12|PACKAGING protein 3|Human adenovirus A serotype 12
Query: 2 PHSPPRSPR 10
HSP R PR
Sbjct: 50 AHSPERHPR 58
>sp|GLYC_HRSV3|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 PHSPPRSPR 10
P SPP +PR
Sbjct: 289 PSSPPNTPR 297
>sp|GLYC_HRSV2|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 PHSPPRSPR 10
P SPP +PR
Sbjct: 289 PSSPPNTPR 297
>sp|GLYC_HRSVA|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 PHSPPRSPR 10
P SPP +PR
Sbjct: 289 PSSPPNTPR 297
>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 PPRSPR 10
PPRSPR
Sbjct: 446 PPRSPR 451
>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PPRSPR 10
PPRSPR
Sbjct: 446 PPRSPR 451
>sp|REX_HTLV2|PROTEIN Rex|Human T-cell leukemia virus 2
Query: 1 SPHSPPRSPR 10
SP SPPR P+
Sbjct: 95 SPPSPPREPQ 104
>sp|KBZIP_HHV8P|E3 SUMO-protein ligase K-bZIP|Human herpesvirus 8 type P
Query: 3 HSPPRSP 9
H+PPR P
Sbjct: 110 HTPPRGP 116
>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)
Query: 1 SPHSPPRSP 9
SPH PP +P
Sbjct: 371 SPHRPPAAP 379
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 1 SPHSPPRSPR 10
P SPP+ PR
Sbjct: 18 DPDSPPKRPR 27
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 SPHSPPRSPR 10
P SPP+ PR
Sbjct: 29 GPDSPPKRPR 38
>sp|UL130_HCMVA|UNCHARACTERIZED protein UL130|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 SPPRSP 9
SPPRSP
Sbjct: 63 SPPRSP 68
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 SPHSPPRSPR 10
SPH +PR
Sbjct: 947 SPHETIANPR 956
>sp|UL130_HCMVM|ENVELOPE glycoprotein UL130|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 SPPRSP 9
SPPRSP
Sbjct: 63 SPPRSP 68
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PPRSPR 10
PP SPR
Sbjct: 99 PPYSPR 104
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PPRSPR 10
PP SPR
Sbjct: 99 PPYSPR 104
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 SPHSPPRSP 9
+P SPP SP
Sbjct: 667 APASPPNSP 675
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 SPPRSP 9
SPP SP
Sbjct: 402 SPPESP 407
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 SPHSPP 6
+PH PP
Sbjct: 702 NPHGPP 707
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 SPHSPP 6
+PH PP
Sbjct: 702 NPHGPP 707
120|SequenceR|605|596|PSGHASPHSP
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PSGHASPHSP 10
P+G A+P P
Sbjct: 436 PTGKAAPQLP 445
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PSGHASPHSP 10
P G S H P
Sbjct: 703 PKGIGSSHGP 712
>sp|TRM2_HHV2H|TRIPARTITE terminase subunit 2|Human herpesvirus 2 (strain HG52)
Query: 1 PSGHASPHS 9
P G A+PH+
Sbjct: 88 PDGPAAPHT 96
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 1 PSGHASPHSP 10
P A+PH P
Sbjct: 626 PPLQANPHPP 635
>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 4 HASPH 8
H SPH
Sbjct: 76 HCSPH 80
>sp|CAP8_ADE41|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 41
Query: 3 GHASPHSP 10
G +SP+SP
Sbjct: 119 GRSSPYSP 126
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 PSGHASPHS 9
PSG P+S
Sbjct: 931 PSGEECPNS 939
>sp|US03_HCMVT|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 GHASPHS 9
GH PH+
Sbjct: 102 GHPVPHT 108
121|SequenceR|610|601|TSVPAPSGHA
>sp|GD_CHV1|ENVELOPE glycoprotein D|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 4 PAPSGH 9
PAPSGH
Sbjct: 335 PAPSGH 340
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 2 SVPAPSGH 9
+VP PSG+
Sbjct: 443 TVPCPSGN 450
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 1 TSVPAPSGH 9
TSVP P H
Sbjct: 292 TSVPTPGSH 300
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 2 SVPAPSGHA 10
S+P P+G A
Sbjct: 575 SIPLPNGTA 583
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SVPAPSGHA 10
S+P P+G A
Sbjct: 575 SIPLPNGTA 583
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TSVPAPSG 8
T +PAP G
Sbjct: 730 TRLPAPRG 737
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 4 PAPSGH 9
PAP+GH
Sbjct: 460 PAPTGH 465
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TSVPAPSG 8
T +PAP G
Sbjct: 728 THLPAPRG 735
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 SVPAPSG 8
SVP PSG
Sbjct: 786 SVPVPSG 792
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 SVPAPSG 8
SVP PSG
Sbjct: 786 SVPVPSG 792
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 SVPAPSG 8
SVP PSG
Sbjct: 786 SVPVPSG 792
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 4 PAPSGH 9
P P+GH
Sbjct: 133 PPPNGH 138
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SVPAPSGH 9
S P P+GH
Sbjct: 466 SEPLPTGH 473
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TSVPAPSG 8
T +PAP G
Sbjct: 726 TLLPAPRG 733
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TSVPAPSG 8
T +PAP G
Sbjct: 716 TLLPAPRG 723
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TSVPAPSG 8
T +PAP G
Sbjct: 716 TLLPAPRG 723
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PAPSGHA 10
P P GHA
Sbjct: 580 PLPRGHA 586
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 SVPAPSGH 9
+VP P GH
Sbjct: 1702 TVPDPVGH 1709
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 SVPAPSGH 9
+VP P GH
Sbjct: 1702 TVPDPVGH 1709
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 4 PAPSGH 9
P P+GH
Sbjct: 468 PLPTGH 473
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 3 VPAPSGH 9
+ APSGH
Sbjct: 457 LDAPSGH 463
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 2 SVPAPSG 8
S+P PSG
Sbjct: 122 SIPTPSG 128
>sp|C_MEASA|PROTEIN C|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 SVPAPSGH 9
S P+PS H
Sbjct: 12 SRPSPSAH 19
>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58
Query: 2 SVPAPSG 8
S+P PSG
Sbjct: 122 SIPTPSG 128
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 2 SVPAPSGHA 10
S+P+ GHA
Sbjct: 228 SLPSLKGHA 236
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 VPAPSGH 9
VP SGH
Sbjct: 595 VPVDSGH 601
>sp|C_MEASE|PROTEIN C|Measles virus (strain Edmonston) (MeV)
Query: 2 SVPAPSGH 9
S P+PS H
Sbjct: 12 SRPSPSAH 19
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 APSGHA 10
PSGHA
Sbjct: 1171 CPSGHA 1176
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 APSGHA 10
PSGHA
Sbjct: 1171 CPSGHA 1176
122|SequenceR|615|606|MRKPMTSVPA
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate
Query: 4 PMTSVPA 10
P TS PA
Sbjct: 3 PFTSAPA 9
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 1 MRKPMTSVP 9
++KP S+P
Sbjct: 368 IKKPYRSIP 376
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 MRKPMTSVP 9
++KP S+P
Sbjct: 368 IKKPYRSIP 376
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 1 MRKPMTSVP 9
++KP S+P
Sbjct: 368 IKKPYRSIP 376
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 MRKPMTSVP 9
++KP S+P
Sbjct: 368 IKKPYRSIP 376
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 1 MRKPMTSVP 9
++KP S+P
Sbjct: 368 IKKPYRSIP 376
>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)
Query: 1 MRKPMTSVP 9
++KP S+P
Sbjct: 368 IKKPYRSIP 376
>sp|TRX2_HHV6Z|TRIPLEX capsid protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 MRKPMT 6
+RKPMT
Sbjct: 79 LRKPMT 84
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 MRKPMTSVP 9
+RKP TS P
Sbjct: 781 VRKPATSPP 789
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 RKPMTSVPA 10
R P+TS PA
Sbjct: 2778 RPPLTSGPA 2786
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 2 RKPMTSVPA 10
++P T VPA
Sbjct: 401 KRPKTGVPA 409
123|SequenceR|620|611|PGESSMRKPM
>sp|US06_HCMVT|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 1 PGESSMRKP 9
PGE S R P
Sbjct: 18 PGERSSRDP 26
>sp|US06_HCMVM|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 1 PGESSMRKP 9
PGE S R P
Sbjct: 18 PGERSSRDP 26
>sp|US06_HCMVA|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 PGESSMRKP 9
PGE S R P
Sbjct: 18 PGERSSRDP 26
>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus
Query: 1 PGESSMRKPM 10
PG ++ KP+
Sbjct: 331 PGSCNIHKPI 340
>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate
Query: 1 PGESSMRKPM 10
PG ++ KP+
Sbjct: 331 PGSCNIHKPI 340
>sp|CORE5_ADE12|CORE-CAPSID bridging protein|Human adenovirus A serotype 12
Query: 1 PGESSMRKPM 10
PGE ++ +P+
Sbjct: 87 PGERTIMRPL 96
124|SequenceR|625|616|PSMRPPGESS
>sp|J1S_HCMVA|UNCHARACTERIZED protein J1S|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PSMRPPGESS 10
P RPPG SS
Sbjct: 121 PCCRPPGTSS 130
>sp|J1L_HCMVA|UNCHARACTERIZED protein J1L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PSMRPPGESS 10
P RPPG SS
Sbjct: 238 PCCRPPGTSS 247
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 PSMRPPGE 8
P MR PGE
Sbjct: 364 PEMRIPGE 371
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 PSMRPPGE 8
P MR PGE
Sbjct: 364 PEMRIPGE 371
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 PSMRPPGE 8
PSM PGE
Sbjct: 362 PSMNIPGE 369
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 PSMRPPGE 8
P +R PGE
Sbjct: 362 PELRIPGE 369
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 3 MRPPGESS 10
RPPG+++
Sbjct: 36 FRPPGDNT 43
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 3 MRPPGE 8
+RPPG+
Sbjct: 1942 LRPPGQ 1947
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 PSMRPPGE 8
P M PGE
Sbjct: 362 PEMHIPGE 369
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 PSMRPPGE 8
PSM PP E
Sbjct: 722 PSMPPPAE 729
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 1 PSMRPPGE 8
P+ RPP E
Sbjct: 131 PTSRPPAE 138
125|SequenceR|630|621|HRQAKPSMRP
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 HRQAKPSMRP 10
H +KP RP
Sbjct: 338 HWGSKPESRP 347
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 HRQAKPSMRP 10
H +KP RP
Sbjct: 338 HWGSKPESRP 347
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HRQAKPSMRP 10
H +KP RP
Sbjct: 338 HWGSKPESRP 347
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HRQAKPSMRP 10
H +KP RP
Sbjct: 338 HWGSKPESRP 347
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 1 HRQAKPSMRP 10
H +KP RP
Sbjct: 338 HWGSKPESRP 347
126|SequenceR|635|626|RHNRPHRQAK
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 NRPHRQA 9
+RPHR+A
Sbjct: 2159 SRPHREA 2165
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 RHNRPHR 7
R RPHR
Sbjct: 1736 RAGRPHR 1742
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 RHNRPHR 7
R RPHR
Sbjct: 1756 RAGRPHR 1762
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 RHNRPHR 7
R RPHR
Sbjct: 1786 RAGRPHR 1792
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 RHNRPHR 7
R RPHR
Sbjct: 1736 RAGRPHR 1742
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 RHNRPHR 7
R RPHR
Sbjct: 1756 RAGRPHR 1762
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 RHNRPHR 7
R RPHR
Sbjct: 1786 RAGRPHR 1792
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 HNRPHRQAK 10
HN PHR +
Sbjct: 1500 HNLPHRSLR 1508
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 HNRPHRQAK 10
HN PHR +
Sbjct: 1500 HNLPHRSLR 1508
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 HNRPHR 7
HN PHR
Sbjct: 1498 HNLPHR 1503
Query: 1 RHNRPH 6
RHNR H
Sbjct: 1338 RHNRAH 1343
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 HNRPHR 7
HN PHR
Sbjct: 1498 HNLPHR 1503
Query: 1 RHNRPH 6
RHNR H
Sbjct: 1338 RHNRAH 1343
>sp|YVBC_VACCC|UNCHARACTERIZED 10.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 HNRPH 6
+NRPH
Sbjct: 19 YNRPH 23
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 4 RPHRQAK 10
RPHR +
Sbjct: 1195 RPHRSVR 1201
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 HNRPHR 7
HN P+R
Sbjct: 2822 HNNPYR 2827
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 1 RHNRPHR 7
R +RPHR
Sbjct: 927 RVHRPHR 933
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 NRPHRQAK 10
N PH Q K
Sbjct: 3330 NNPHMQDK 3337
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 NRPHRQAK 10
N PH Q K
Sbjct: 3330 NNPHMQDK 3337
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 NRPHRQAK 10
N PH Q K
Sbjct: 3330 NNPHMQDK 3337
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 NRPHRQAK 10
N PH Q K
Sbjct: 3330 NNPHMQDK 3337
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 NRPHRQAK 10
N PH Q K
Sbjct: 3330 NNPHMQDK 3337
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 NRPHRQAK 10
N PH Q K
Sbjct: 3330 NNPHMQDK 3337
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 HNRPH 6
H RPH
Sbjct: 1560 HRRPH 1564
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 1 RHNRPHRQAK 10
RH PH Q +
Sbjct: 116 RHAIPHGQCE 125
>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 NRPHRQ 8
+RPHR+
Sbjct: 175 HRPHRR 180
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RHNRPHRQA 9
RH + HR A
Sbjct: 146 RHAKIHRSA 154
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RHNRPHRQA 9
RH + HR A
Sbjct: 146 RHAKIHRSA 154
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 HNRPHRQA 9
HN HR +
Sbjct: 450 HNHSHRSS 457
127|SequenceR|640|631|RGASVRHNRP
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate
Query: 3 ASVRHNRP 10
A +RHN+P
Sbjct: 33 AQLRHNQP 40
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 ASVRHNRP 10
A +RHN+P
Sbjct: 33 AQLRHNQP 40
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 5 VRHNRP 10
+ HNRP
Sbjct: 1201 INHNRP 1206
>sp|UL38_HCMVA|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RGASVRHN 8
RGA +RH+
Sbjct: 51 RGARLRHD 58
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 SVRHNRP 10
S+RH RP
Sbjct: 1310 SLRHGRP 1316
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 SVRHNRP 10
S+RH RP
Sbjct: 1310 SLRHGRP 1316
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 SVRHNRP 10
S+RH RP
Sbjct: 1310 SLRHGRP 1316
>sp|UL38_HCMVM|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RGASVRHN 8
RGA +RH+
Sbjct: 51 RGARLRHD 58
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 RGASVR 6
RGASVR
Sbjct: 1071 RGASVR 1076
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 RGASVR 6
RGASVR
Sbjct: 1071 RGASVR 1076
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 RGASVR 6
RGASVR
Sbjct: 1071 RGASVR 1076
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 RGASVR 6
RGASVR
Sbjct: 1071 RGASVR 1076
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 RGASVR 6
RGASVR
Sbjct: 1071 RGASVR 1076
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 RGASVR 6
RGASVR
Sbjct: 1071 RGASVR 1076
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 RGASVR 6
RGASVR
Sbjct: 1071 RGASVR 1076
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 RGASVR 6
RGASVR
Sbjct: 1071 RGASVR 1076
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 3 ASVRHN 8
ASV+HN
Sbjct: 321 ASVKHN 326
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RGASVRHN 8
RGA + HN
Sbjct: 1527 RGAVLTHN 1534
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RGASVRHN 8
RGA + HN
Sbjct: 1527 RGAVLTHN 1534
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RGASVRHN 8
RGA + HN
Sbjct: 1527 RGAVLTHN 1534
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RGASVRHN 8
RGA + HN
Sbjct: 1527 RGAVLTHN 1534
>sp|Y115_ADE07|UNCHARACTERIZED 11.5 kDa early protein|Human adenovirus B serotype 7
Query: 1 RGASVRHNRP 10
RG+ V+ +RP
Sbjct: 64 RGSLVQQSRP 73
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 3 ASVRHN 8
ASV+HN
Sbjct: 325 ASVKHN 330
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 2 GASVRHNRP 10
GA+ H+RP
Sbjct: 69 GAASHHHRP 77
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 GASVRHNRP 10
GA+ H+RP
Sbjct: 69 GAASHHHRP 77
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 3 ASVRHN 8
ASV+HN
Sbjct: 336 ASVKHN 341
>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)
Query: 1 RGASVRHNR 9
RGA+ H+R
Sbjct: 244 RGAAASHSR 252
128|SequenceR|645|636|SSISGRGASV
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SISGRGAS 9
S+SG GAS
Sbjct: 693 SVSGTGAS 700
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 GRGASV 10
GRGAS+
Sbjct: 340 GRGASI 345
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SISGRGAS 9
S+SG GAS
Sbjct: 694 SVSGTGAS 701
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 SSISGR 6
SSISGR
Sbjct: 1784 SSISGR 1789
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 5 GRGASV 10
GRGAS+
Sbjct: 340 GRGASI 345
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 SSISGRGASV 10
+SIS RG ++
Sbjct: 627 TSISSRGITI 636
129|SequenceR|650|641|VFELGSSISG
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 LGSSISG 10
LG+SISG
Sbjct: 1074 LGTSISG 1080
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 LGSSISG 10
LG+SISG
Sbjct: 1074 LGTSISG 1080
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 LGSSISG 10
LG+SISG
Sbjct: 1074 LGTSISG 1080
>sp|OX2V_HHV6Z|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6B (strain
Query: 1 VFELGSSIS 9
V+E+GS+++
Sbjct: 31 VYEIGSTVT 39
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 1 VFELGSSISG 10
+FE+ +++SG
Sbjct: 637 LFEMKTTVSG 646
>sp|PG159_VARV|PROTEIN OPG159|Variola virus
Query: 1 VFELGSSI 8
+++LGSSI
Sbjct: 92 IYKLGSSI 99
>sp|PG159_VAR67|PROTEIN OPG159|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VFELGSSI 8
+++LGSSI
Sbjct: 92 IYKLGSSI 99
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 3 ELGSSISG 10
E GSSI G
Sbjct: 287 EFGSSILG 294
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 ELGSSISG 10
E GSSI G
Sbjct: 287 EFGSSILG 294
>sp|PG159_VACCC|PROTEIN OPG159|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VFELGSSI 8
+++LGSSI
Sbjct: 92 IYKLGSSI 99
>sp|PG159_MONPV|PROTEIN OPG159|Monkeypox virus (MPXV)
Query: 1 VFELGSSI 8
+++LGSSI
Sbjct: 92 IYKLGSSI 99
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 FELGSSISG 10
F G+S+SG
Sbjct: 2989 FSRGNSLSG 2997
130|SequenceR|655|646|PPNHSVFELG
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 2 PNHSVFE 8
PNHS FE
Sbjct: 286 PNHSTFE 292
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 2 PNHSVFE 8
PNHS FE
Sbjct: 286 PNHSTFE 292
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 2 PNHSVFE 8
PNHS FE
Sbjct: 286 PNHSTFE 292
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 2 PNHSVFE 8
PNHS FE
Sbjct: 286 PNHSTFE 292
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 3 NHSVFELG 10
NH+V +LG
Sbjct: 18 NHTVLKLG 25
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 NHSVFELG 10
NH+V +LG
Sbjct: 18 NHTVLKLG 25
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 3 NHSVFELG 10
NH+V +LG
Sbjct: 18 NHTVLKLG 25
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 NHSVFELG 10
NH+V +LG
Sbjct: 18 NHAVLKLG 25
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 3 NHSVFELG 10
NH+V +LG
Sbjct: 18 NHAVLKLG 25
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 NHSVFELG 10
NH+V +LG
Sbjct: 18 NHAVLKLG 25
>sp|DUT_HHV6Z|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6B (strain
Query: 1 PPNHSVFEL 9
PP +VF L
Sbjct: 250 PPESAVFHL 258
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 HSVFELG 10
H VFE+G
Sbjct: 252 HRVFEVG 258
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 NHSVFE 8
NHSVF+
Sbjct: 374 NHSVFQ 379
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 4 HSVFELG 10
HS+ ELG
Sbjct: 4 HSLLELG 10
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 4 HSVFELG 10
HS+ ELG
Sbjct: 4 HSLLELG 10
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 4 HSVFELG 10
HS+ ELG
Sbjct: 4 HSLLELG 10
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 4 HSVFELG 10
HS+ ELG
Sbjct: 4 HSLLELG 10
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 NHSVFELG 10
NH V +LG
Sbjct: 18 NHVVLKLG 25
>sp|TR14_HCMVA|PROTEIN TRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PNHSVFELG 10
P H + ELG
Sbjct: 40 PTHKMCELG 48
>sp|VL2_HPV44|MINOR capsid protein L2|Human papillomavirus 44
Query: 1 PPNHSVFEL 9
PP+H+ FE+
Sbjct: 123 PPSHAGFEI 131
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 PPNHSVF 7
P NH V+
Sbjct: 1980 PANHEVY 1986
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 PPNHSVF 7
P NH V+
Sbjct: 1980 PANHEVY 1986
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PPNHSVF 7
PP H V+
Sbjct: 847 PPKHGVY 853
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 3 NHSVFEL 9
NHS+F++
Sbjct: 623 NHSIFKV 629
131|SequenceR|660|651|TAAESPPNHS
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 TAAESPP 7
TAA+SPP
Sbjct: 313 TAAQSPP 319
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 ESPPNH 9
E+PP+H
Sbjct: 1237 EAPPDH 1242
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 4 ESPPNH 9
E+PP+H
Sbjct: 1237 EAPPDH 1242
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 4 ESPPNH 9
E+PP+H
Sbjct: 1237 EAPPDH 1242
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 4 ESPPNH 9
E+PP+H
Sbjct: 1237 EAPPDH 1242
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 4 ESPPNH 9
E+PP+H
Sbjct: 1237 EAPPDH 1242
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 4 ESPPNH 9
E+PP+H
Sbjct: 1237 EAPPDH 1242
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 4 ESPPNH 9
E+PP+H
Sbjct: 1237 EAPPDH 1242
>sp|YVBA_VACCC|UNCHARACTERIZED 11.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 PPNH 9
PPNH
Sbjct: 49 PPNH 52
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 1 TAAESPP 7
T AESPP
Sbjct: 412 TRAESPP 418
132|SequenceR|665|656|RAVPPTAAES
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 AVPPTAA 8
A+PPTA
Sbjct: 58 AIPPTAG 64
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 AVPPTAA 8
A+PPTA
Sbjct: 58 AIPPTAG 64
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 AVPPTAA 8
A+PPTA
Sbjct: 58 AIPPTAG 64
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 AVPPTAA 8
A+PPTA
Sbjct: 58 AIPPTAG 64
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 AVPPTAA 8
A+PPTA
Sbjct: 58 AIPPTAG 64
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 AVPPTAA 8
A+PPTA
Sbjct: 58 AIPPTAG 64
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 AVPPTAA 8
A+PPTA
Sbjct: 58 AIPPTAG 64
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 AVPPTAA 8
A+PPTA
Sbjct: 58 AIPPTAG 64
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 AVPPTAA 8
A+PPTA
Sbjct: 58 AIPPTAG 64
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 AVPPTAA 8
A+PPTA
Sbjct: 58 AIPPTAG 64
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 1 RAVPPTAA 8
RA PPT A
Sbjct: 240 RAAPPTQA 247
>sp|DUT_HHV2H|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 2 (strain
Query: 1 RAVPPTAAE 9
RA PPT E
Sbjct: 132 RATPPTLTE 140
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 1 RAVPPTAAES 10
R PP+AAE+
Sbjct: 189 RRAPPSAAEA 198
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 AVPPTAA 8
++PPTA
Sbjct: 57 SIPPTAG 63
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 AVPPTAA 8
++PPTA
Sbjct: 57 SIPPTAG 63
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 AVPPTAA 8
++PPTA
Sbjct: 57 SIPPTAG 63
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 AVPPTAA 8
++PPTA
Sbjct: 57 SIPPTAG 63
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 AVPPTAA 8
++PPTA
Sbjct: 57 SIPPTAG 63
133|SequenceR|670|661|GSPSTRAVPP
>sp|M2_I59A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 GSPSTRAVP 9
G PST VP
Sbjct: 61 GGPSTEGVP 69
>sp|M2_I34A1|MATRIX protein 2|Influenza A virus (strain A/Puerto
Query: 1 GSPSTRAVP 9
G PST VP
Sbjct: 61 GGPSTEGVP 69
>sp|M2_I000X|MATRIX protein 2|Influenza A virus (strain A/X-31
Query: 1 GSPSTRAVP 9
G PST VP
Sbjct: 61 GGPSTEGVP 69
>sp|M2_I06A0|MATRIX protein 2|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 GSPSTRAVP 9
G PST VP
Sbjct: 61 GGPSTEGVP 69
>sp|M2_I02A5|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 PSTRAVP 9
PST+ VP
Sbjct: 63 PSTKGVP 69
>sp|M2_I97A1|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I97A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I96A2|MATRIX protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I96A0|MATRIX protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I89A2|MATRIX protein 2|Influenza A virus (strain A/Beijing/353/1989
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I88A7|MATRIX protein 2|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I88A5|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I88A3|MATRIX protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I85A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I83A8|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I83A1|MATRIX protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I82A9|MATRIX protein 2|Influenza A virus (strain A/Philippines/2/1982
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I82A7|MATRIX protein 2|Influenza A virus (strain A/Swine/Hong
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I81A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I80AA|MATRIX protein 2|Influenza A virus (strain A/India/6263/1980
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I80A4|MATRIX protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I80A2|MATRIX protein 2|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I79A0|MATRIX protein 2|Influenza A virus (strain A/Bangkok/1/1979
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I78A8|MATRIX protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I78A7|MATRIX protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I78A3|MATRIX protein 2|Influenza A virus (strain A/Mallard/New
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I77AB|MATRIX protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I77AA|MATRIX protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I77A9|MATRIX protein 2|Influenza A virus (strain A/Equine/New
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I75A0|MATRIX protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I73A5|MATRIX protein 2|Influenza A virus (strain A/Port
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I72A8|MATRIX protein 2|Influenza A virus (strain A/Udorn/1972
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I72A4|MATRIX protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I72A3|MATRIX protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I72A2|MATRIX protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I71A1|MATRIX protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I70A0|MATRIX protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I68A6|MATRIX protein 2|Influenza A virus (strain A/Northern
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I68A5|MATRIX protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I68A4|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I68A0|MATRIX protein 2|Influenza A virus (strain A/Aichi/2/1968
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I67A2|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I67A0|MATRIX protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I60A0|MATRIX protein 2|Influenza A virus (strain A/Ann
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I57A5|MATRIX protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I57A1|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I57A0|MATRIX protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I54A2|MATRIX protein 2|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I51A0|MATRIX protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I50A0|MATRIX protein 2|Influenza A virus (strain A/Fort
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I45A0|MATRIX protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I43A0|MATRIX protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I40A0|MATRIX protein 2|Influenza A virus (strain A/Hickox/1940
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I37A0|MATRIX protein 2|Influenza A virus (strain A/Swine/29/1937
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I36A0|MATRIX protein 2|Influenza A virus (strain A/Henry/1936
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I33A0|MATRIX protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I18A0|MATRIX protein 2|Influenza A virus (strain A/Brevig
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I02A6|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I02A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I02A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I01A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 PSTRAVP 9
PST VP
Sbjct: 66 PSTEGVP 72
>sp|M2_I01A1|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I01A0|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I000F|MATRIX protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I69A0|MATRIX protein 2|Influenza A virus (strain A/England/878/1969
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I85A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I76A6|MATRIX protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I77AC|MATRIX protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I00A0|MATRIX protein 2|Influenza A virus (strain A/Duck/Hong
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 GSPSTR 6
G+PSTR
Sbjct: 2071 GTPSTR 2076
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 GSPSTR 6
G+PSTR
Sbjct: 2071 GTPSTR 2076
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 GSPSTR 6
G+PSTR
Sbjct: 2071 GTPSTR 2076
>sp|M2_I61A1|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I01A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I07A0|MATRIX protein 2|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 PSTRAVP 9
PST VP
Sbjct: 60 PSTEGVP 66
>sp|M2_I96A3|MATRIX protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 GSPSTRAVPP 10
G P RA PP
Sbjct: 428 GHPEPRAFPP 437
>sp|M2_I77A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|M2_I00A1|MATRIX protein 2|Influenza A virus (strain A/New
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 GSPSTRAVPP 10
G P RA PP
Sbjct: 428 GHPDPRAFPP 437
>sp|M2_I30A0|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 2 SPSTRAVP 9
+PS R VP
Sbjct: 5 NPSERGVP 12
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 2 SPSTRAVP 9
+PS R VP
Sbjct: 5 NPSERGVP 12
>sp|M2_I35A3|MATRIX protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 3 PSTRAVP 9
PST VP
Sbjct: 63 PSTEGVP 69
>sp|TEG3_HHV2H|TEGUMENT protein UL14|Human herpesvirus 2 (strain HG52)
Query: 1 GSPSTRAVPP 10
G P +A PP
Sbjct: 179 GRPDAQAAPP 188
134|SequenceR|675|666|SSWTGGSPST
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SSWTGGSPST 10
S+W+ SP T
Sbjct: 1327 SNWSNPSPKT 1336
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SSWTGGSPST 10
S+W+ SP T
Sbjct: 1327 SNWSNPSPKT 1336
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 5 GGSPST 10
GG+PST
Sbjct: 2070 GGTPST 2075
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 5 GGSPST 10
GG+PST
Sbjct: 2070 GGTPST 2075
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 5 GGSPST 10
GG+PST
Sbjct: 2070 GGTPST 2075
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SSWTGGSP 8
S W GG P
Sbjct: 517 SVWRGGEP 524
>sp|PG108_VAR67|ENVELOPE protein H3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 WTGGS 7
WTGG+
Sbjct: 68 WTGGN 72
>sp|PG108_VACCC|ENVELOPE protein H3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 WTGGS 7
WTGG+
Sbjct: 67 WTGGN 71
>sp|PG108_MONPV|ENVELOPE protein OPG108|Monkeypox virus (MPXV)
Query: 3 WTGGS 7
WTGG+
Sbjct: 67 WTGGN 71
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SSWTGGSP 8
S W GG P
Sbjct: 517 SVWRGGEP 524
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 WTGGSPS 9
W GG+P+
Sbjct: 131 WCGGAPA 137
>sp|LMP1_EBVR|LATENT membrane protein 1|Epstein-Barr virus (strain Raji) (HHV-4)
Query: 1 SSWTGGS 7
S+WTGG+
Sbjct: 45 SNWTGGA 51
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 SSWTGGSPS 9
++W GG+ S
Sbjct: 7068 TTWNGGAYS 7076
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 SSWTGGSPS 9
++W GG+ S
Sbjct: 7088 TTWNGGAYS 7096
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 SSWTGGSPS 9
++W GG+ S
Sbjct: 7118 TTWNGGAYS 7126
>sp|NSS_RVFVZ|NON-STRUCTURAL protein S|Rift valley fever virus (strain
Query: 2 SWTGGSPS 9
SW G PS
Sbjct: 112 SWPLGEPS 119
>sp|SPIKE_ADE07|FIBER protein|Human adenovirus B serotype 7
Query: 3 WTGGSPST 10
WTG +P+T
Sbjct: 153 WTGVNPTT 160
>sp|LMP1_EBVB9|LATENT membrane protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SSWTGGS 7
S WTGG+
Sbjct: 45 SDWTGGA 51
>sp|LMP1_EBVG|LATENT membrane protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SSWTGGS 7
S+WTGG+
Sbjct: 45 SNWTGGA 51
>sp|VP22_VZVO|TEGUMENT protein VP22|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SSWTGGSPS 9
SSW G +PS
Sbjct: 167 SSWCGPTPS 175
>sp|VP22_VZVD|TEGUMENT protein VP22|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SSWTGGSPS 9
SSW G +PS
Sbjct: 167 SSWCGPTPS 175
>sp|LMP1_EBVC|LATENT membrane protein 1|Epstein-Barr virus (strain Cao) (HHV-4)
Query: 1 SSWTGGS 7
S WTGG+
Sbjct: 45 SDWTGGA 51
>sp|LMP1_EBVA8|LATENT membrane protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SSWTGGS 7
S WTGG+
Sbjct: 45 SDWTGGA 51
135|SequenceR|680|671|VGSVVSSWTG
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 VGSVVSSWT 9
VGS VS+WT
Sbjct: 584 VGSSVSAWT 592
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 SVVSSWT 9
SV+S+WT
Sbjct: 585 SVISNWT 591
>sp|NSP3_ROTH3|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 1 VGSVVSS 7
+GSVVSS
Sbjct: 238 IGSVVSS 244
>sp|NSP3_ROTHS|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])
Query: 1 VGSVVSS 7
+GSV+SS
Sbjct: 238 IGSVISS 244
>sp|NSP3_ROTHL|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 1 VGSVVSS 7
+GSV+SS
Sbjct: 238 IGSVISS 244
>sp|NSP3_ROTHD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 VGSVVSS 7
+GSV+SS
Sbjct: 238 IGSVISS 244
>sp|NSP3_ROTH6|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 1 VGSVVSS 7
+GSV+SS
Sbjct: 238 IGSVISS 244
>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 SVVSSWTG 10
++VS W G
Sbjct: 184 TIVSHWMG 191
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 2 GSVVSSW 8
G V+SSW
Sbjct: 507 GKVISSW 513
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 GSVVSSW 8
GSV+S W
Sbjct: 318 GSVLSCW 324
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 GSVVSSW 8
G V+SSW
Sbjct: 507 GKVISSW 513
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 2 GSVVSSW 8
G V+SSW
Sbjct: 507 GKVISSW 513
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 GSVVSSW 8
GSV+S W
Sbjct: 318 GSVLSCW 324
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 GSVVSSW 8
GSV+S W
Sbjct: 318 GSVLSCW 324
>sp|C_PI1HD|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 2 GSVVSSWT 9
GS+VSS T
Sbjct: 46 GSIVSSTT 53
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 5 VSSWT 9
+SSWT
Sbjct: 1512 ISSWT 1516
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GSVVSSW 8
GSV S W
Sbjct: 318 GSVFSCW 324
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 GSVVSSW 8
GSV S W
Sbjct: 320 GSVFSCW 326
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 GSVVSSW 8
GSV S W
Sbjct: 318 GSVFSCW 324
136|SequenceR|685|676|PSLRPVGSVV
>sp|VE2_HPV1|REGULATORY protein E2|Human papillomavirus type 1 (Human
Query: 1 PSLRPVGSV 9
PS R VGS+
Sbjct: 288 PSARDVGSI 296
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 PSLRPV 6
P+LRPV
Sbjct: 1529 PTLRPV 1534
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PSLRPVGSVV 10
PS PVG+ V
Sbjct: 214 PSFMPVGAKV 223
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PSLRPVGSVV 10
PS PVG+ V
Sbjct: 214 PSFMPVGAKV 223
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PSLRPVGSVV 10
PS PVG+ V
Sbjct: 214 PSFMPVGAKV 223
>sp|CAP6_ADE41|PRE-PROTEIN VI|Human adenovirus F serotype 41
Query: 1 PSLRPVGSVV 10
P RP+GS+
Sbjct: 180 PMTRPIGSMA 189
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 3 LRPVGS 8
L+PVGS
Sbjct: 787 LKPVGS 792
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 3 LRPVGS 8
L+PVGS
Sbjct: 787 LKPVGS 792
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 3 LRPVGS 8
L+PVGS
Sbjct: 787 LKPVGS 792
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 3 LRPVGS 8
L+PVGS
Sbjct: 786 LKPVGS 791
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 2 SLRPVGSVV 10
+LRPVG+
Sbjct: 330 ALRPVGAAA 338
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 4 RPVGSVV 10
RP+G+V+
Sbjct: 141 RPLGTVI 147
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 2 SLRPVGSVV 10
+LRPVG+
Sbjct: 330 ALRPVGAAA 338
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 4 RPVGSVV 10
RP+G+V+
Sbjct: 141 RPLGTVI 147
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 2 SLRPVGSVV 10
+LRPVG+
Sbjct: 333 ALRPVGAAA 341
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 LRPVGSVV 10
L P GS+V
Sbjct: 484 LNPTGSIV 491
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 SLRPVGSV 9
LRP+GS+
Sbjct: 122 DLRPLGSL 129
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 LRPVGSVV 10
L P GS+V
Sbjct: 484 LNPTGSIV 491
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 LRPVGSVV 10
L P GS+V
Sbjct: 484 LNPTGSIV 491
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 SLRPVGSV 9
LRP+GS+
Sbjct: 122 DLRPLGSL 129
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 LRPVGSVV 10
L P GS+V
Sbjct: 484 LNPTGSIV 491
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 LRPVGSVV 10
L P GS+V
Sbjct: 484 LNPTGSIV 491
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 LRPVGSVV 10
L P GS+V
Sbjct: 484 LNPTGSIV 491
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 LRPVGSVV 10
L P GS+V
Sbjct: 484 LNPTGSIV 491
>sp|VL2_HPV54|MINOR capsid protein L2|Human papillomavirus type 54
Query: 1 PSLRPVGSV 9
P +RP G+V
Sbjct: 85 PPVRPAGAV 93
137|SequenceR|690|681|PRHTKPSLRP
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 PRHTKP 6
PRH KP
Sbjct: 1576 PRHAKP 1581
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 PRHTKP 6
PRH KP
Sbjct: 1584 PRHAKP 1589
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 PRHTKPSLRP 10
P+H K +RP
Sbjct: 810 PKHVKAYVRP 819
Query: 1 PRHTKP 6
PRH KP
Sbjct: 1576 PRHAKP 1581
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 PRHTKP 6
PRH KP
Sbjct: 1577 PRHAKP 1582
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 PRHTKP 6
PRH KP
Sbjct: 1577 PRHAKP 1582
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 PRHTKP 6
PRH KP
Sbjct: 1596 PRHAKP 1601
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 PRHTKP 6
PRH KP
Sbjct: 1575 PRHAKP 1580
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 PRHTKP 6
PRH KP
Sbjct: 1586 PRHAKP 1591
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 PRHTKP 6
PRH KP
Sbjct: 1578 PRHAKP 1583
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 PRHTKP 6
PRH KP
Sbjct: 1580 PRHAKP 1585
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 PRHTKP 6
PRH KP
Sbjct: 1578 PRHAKP 1583
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 PRHTKP 6
PRH KP
Sbjct: 1578 PRHAKP 1583
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 PRHTKP 6
PRH KP
Sbjct: 1588 PRHAKP 1593
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 PRHTKP 6
PRH KP
Sbjct: 1589 PRHAKP 1594
>sp|VP2_POVBA|MINOR capsid protein VP2|BK polyomavirus (strain AS) (BKPyV)
Query: 1 PRHTKPSL 8
PRH PSL
Sbjct: 150 PRHWGPSL 157
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 PRHTKP 6
PRH KP
Sbjct: 1587 PRHAKP 1592
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 PRHTKP 6
PRH KP
Sbjct: 1594 PRHAKP 1599
>sp|POLG_ECHO9|GENOME polyprotein|Echo 9 virus (EV-9) (Coxsackievirus
Query: 1 PRHTKP 6
PRH KP
Sbjct: 60 PRHAKP 65
>sp|VP2_POVBK|MINOR capsid protein VP2|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 PRHTKPSL 8
PRH PSL
Sbjct: 150 PRHWGPSL 157
>sp|VP2_POVJC|MINOR capsid protein VP2|JC polyomavirus (JCPyV) (JCV)
Query: 1 PRHTKPSL 8
PRH PSL
Sbjct: 150 PRHWGPSL 157
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 PRHTKPSLRP 10
P+H +L+P
Sbjct: 3037 PKHVFKTLKP 3046
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 PRHTKPSLRP 10
P+H +L+P
Sbjct: 3037 PKHVFKTLKP 3046
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 PRHTKPSL 8
P H PSL
Sbjct: 6782 PGHAMPSL 6789
>sp|VU84_HHV6Z|PROTEIN U84|Human herpesvirus 6B (strain Z29)
Query: 1 PRHTKPSLR 9
P+HT P ++
Sbjct: 70 PQHTSPDIK 78
>sp|PHOSP_VSIVC|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 3 HTKPS 7
HTKPS
Sbjct: 48 HTKPS 52
>sp|PHOSP_VSIVA|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 3 HTKPS 7
HTKPS
Sbjct: 48 HTKPS 52
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 4 TKPSLRP 10
T P LRP
Sbjct: 2302 TPPDLRP 2308
>sp|PHOSP_VSIVN|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 3 HTKPS 7
HTKPS
Sbjct: 48 HTKPS 52
>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169)
Query: 2 RHTKPSLRP 10
++TKP RP
Sbjct: 31 KNTKPQCRP 39
>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 RHTKPSLRP 10
++TKP RP
Sbjct: 32 KNTKPQCRP 40
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 3 HTKPSLR 9
HT P LR
Sbjct: 231 HTLPELR 237
138|SequenceR|695|686|QRPSRPRHTK
>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4
Query: 3 PSRPRHTK 10
P RP HTK
Sbjct: 51 PGRPCHTK 58
>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QRPSRPRHTK 10
+RP +PR+T+
Sbjct: 271 RRPRKPRYTR 280
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 QRPSRPR 7
+RP RPR
Sbjct: 2077 KRPLRPR 2083
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 RPSRPRHT 9
+PS P+HT
Sbjct: 591 KPSGPQHT 598
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 RPSRPRH 8
RP R RH
Sbjct: 538 RPRRVRH 544
>sp|NEC2_HHV11|NUCLEAR egress protein 2|Human herpesvirus 1 (strain 17)
Query: 1 QRPSRPRH 8
Q PSRP H
Sbjct: 230 QGPSRPWH 237
>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PSRPRH 8
P+RP+H
Sbjct: 253 PARPQH 258
>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PSRPRH 8
P+RP+H
Sbjct: 253 PARPQH 258
>sp|KBZIP_HHV8P|E3 SUMO-protein ligase K-bZIP|Human herpesvirus 8 type P
Query: 1 QRPSRPRHT 9
QRP++P H
Sbjct: 189 QRPAQPTHV 197
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 RPSRPRHT 9
RP+ P HT
Sbjct: 706 RPAAPYHT 713
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 RPSRPRHT 9
RP+ P HT
Sbjct: 706 RPAAPYHT 713
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 5 RPRHT 9
RP+HT
Sbjct: 1107 RPKHT 1111
>sp|VE4_HPV58|PROTEIN E4|Human papillomavirus 58
Query: 1 QRPSRPRHTK 10
QRP RP TK
Sbjct: 17 QRPPRPPTTK 26
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 QRPSRPR 7
RP+RP+
Sbjct: 2277 HRPNRPK 2283
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 5 RPRHT 9
RPRHT
Sbjct: 327 RPRHT 331
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 5 RPRHT 9
RPRHT
Sbjct: 327 RPRHT 331
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 5 RPRHT 9
RPRHT
Sbjct: 327 RPRHT 331
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PSRPRH 8
PSRP+H
Sbjct: 867 PSRPQH 872
139|SequenceR|700|691|NGISNQRPSR
>sp|NEP_INCMI|NUCLEAR export protein|Influenza C virus (strain C/Mississippi/1980)
Query: 3 ISNQRPS 9
+SNQ PS
Sbjct: 104 VSNQEPS 110
>sp|NEP_INCAA|NUCLEAR export protein|Influenza C virus (strain C/Ann
Query: 3 ISNQRPS 9
+SNQ PS
Sbjct: 109 VSNQEPS 115
>sp|NEP_INCTA|NUCLEAR export protein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 3 ISNQRPS 9
+SNQ PS
Sbjct: 104 VSNQEPS 110
>sp|NEP_INCJH|NUCLEAR export protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 ISNQRPS 9
+SNQ PS
Sbjct: 104 VSNQEPS 110
>sp|NEP_INCYA|NUCLEAR export protein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 3 ISNQRPS 9
+SNQ PS
Sbjct: 104 VSNQEPS 110
>sp|NEP_INCY6|NUCLEAR export protein|Influenza C virus (strain C/Yamagata/1964)
Query: 3 ISNQRPS 9
+SNQ PS
Sbjct: 109 VSNQEPS 115
>sp|NEP_INCJJ|NUCLEAR export protein|Influenza C virus (strain C/JJ/1950)
Query: 3 ISNQRPS 9
+SNQ PS
Sbjct: 109 VSNQEPS 115
>sp|NEP_INCCA|NUCLEAR export protein|Influenza C virus (strain C/California/1978)
Query: 3 ISNQRPS 9
+SNQ PS
Sbjct: 109 VSNQEPS 115
>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 5 NQRPS 9
NQRPS
Sbjct: 149 NQRPS 153
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 NGISNQ 6
NG SNQ
Sbjct: 55 NGFSNQ 60
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 NGISNQ 6
NG SNQ
Sbjct: 55 NGFSNQ 60
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 NGISNQ 6
NG SNQ
Sbjct: 55 NGFSNQ 60
140|SequenceR|705|696|PGSPTNGISN
>sp|PG095_VACCC|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain
Query: 1 PGSPTN 6
PGSPTN
Sbjct: 140 PGSPTN 145
>sp|PG095_VACCA|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain Ankara)
Query: 1 PGSPTN 6
PGSPTN
Sbjct: 140 PGSPTN 145
>sp|PG095_VARV|ENTRY-FUSION complex associated protein OPG095|Variola virus
Query: 1 PGSPTN 6
PGSPTN
Sbjct: 140 PGSPTN 145
>sp|PG095_VAR67|ENTRY-FUSION complex associated protein OPG095|Variola virus (isolate
Query: 1 PGSPTN 6
PGSPTN
Sbjct: 140 PGSPTN 145
>sp|PG095_MONPV|ENTRY-FUSION complex associated protein OPG095|Monkeypox virus (MPXV)
Query: 1 PGSPTN 6
PGSPTN
Sbjct: 140 PGSPTN 145
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 3 SPTNGISN 10
S TNGISN
Sbjct: 263 SGTNGISN 270
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 SPTNGISN 10
S TNGISN
Sbjct: 263 SGTNGISN 270
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 3 SPTNGISN 10
S TNGISN
Sbjct: 263 SGTNGISN 270
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PGSPTN 6
PGSPT+
Sbjct: 49 PGSPTD 54
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PGSPTN 6
PGSPT+
Sbjct: 49 PGSPTD 54
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 PGSPTN 6
PG PTN
Sbjct: 2559 PGVPTN 2564
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 PGSPTN 6
PG PTN
Sbjct: 2559 PGVPTN 2564
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 2 GSPTNGISN 10
GSP + ISN
Sbjct: 91 GSPLSDISN 99
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 1 PGSPTNGISN 10
PGSPT S+
Sbjct: 318 PGSPTTTTSD 327
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 2 GSPTNGISN 10
GSP ISN
Sbjct: 91 GSPLGDISN 99
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GSPTNGISN 10
GSP++GI++
Sbjct: 454 GSPSSGITD 462
>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P
Query: 2 GSPTNG 7
G PTNG
Sbjct: 202 GFPTNG 207
>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain
Query: 1 PGSPTNGISN 10
PG P N S+
Sbjct: 470 PGQPNNQTSD 479
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GSPTNGI 8
G+PTN +
Sbjct: 411 GTPTNNV 417
141|SequenceR|710|701|PSALVPGSPT
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 4 LVPGSPT 10
++PGSP+
Sbjct: 78 IIPGSPS 84
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 4 LVPGSPT 10
++PGSP+
Sbjct: 78 IIPGSPS 84
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 SALVPGSPT 10
S L+PG P+
Sbjct: 1767 STLIPGPPS 1775
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 4 LVPGSPT 10
++PGSP+
Sbjct: 78 VIPGSPS 84
>sp|PG095_MONPV|ENTRY-FUSION complex associated protein OPG095|Monkeypox virus (MPXV)
Query: 6 PGSPT 10
PGSPT
Sbjct: 140 PGSPT 144
>sp|PG095_VARV|ENTRY-FUSION complex associated protein OPG095|Variola virus
Query: 6 PGSPT 10
PGSPT
Sbjct: 140 PGSPT 144
>sp|PG095_VAR67|ENTRY-FUSION complex associated protein OPG095|Variola virus (isolate
Query: 6 PGSPT 10
PGSPT
Sbjct: 140 PGSPT 144
>sp|PG095_VACCC|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain
Query: 6 PGSPT 10
PGSPT
Sbjct: 140 PGSPT 144
>sp|PG095_VACCA|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain Ankara)
Query: 6 PGSPT 10
PGSPT
Sbjct: 140 PGSPT 144
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 LVPGSPT 10
+VPG PT
Sbjct: 2557 VVPGVPT 2563
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 LVPGSPT 10
+VPG PT
Sbjct: 2557 VVPGVPT 2563
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 4 LVPGSPT 10
L+P SPT
Sbjct: 92 LIPKSPT 98
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 4 LVPGSPT 10
+VP SPT
Sbjct: 179 IVPTSPT 185
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 PGSPT 10
PGSPT
Sbjct: 49 PGSPT 53
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 PGSPT 10
PGSPT
Sbjct: 49 PGSPT 53
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 4 LVPGSPT 10
++P SPT
Sbjct: 78 IIPNSPT 84
>sp|UL26_HCMVA|TEGUMENT protein UL26|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PSALVP 6
PSAL+P
Sbjct: 217 PSALLP 222
>sp|UL26_HCMVM|TEGUMENT protein UL26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PSALVP 6
PSAL+P
Sbjct: 217 PSALLP 222
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 3 ALVPGSP 9
A+VPG P
Sbjct: 131 AIVPGDP 137
142|SequenceR|715|706|IIGAQPSALV
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 IIGAQPSAL 9
IIGA+P L
Sbjct: 659 IIGAEPGQL 667
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IIGAQPSA 8
++GA+P A
Sbjct: 884 VVGAEPPA 891
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 IIGAQPSALV 10
+ QP+ALV
Sbjct: 1221 VFNIQPAALV 1230
>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 GAQPSA 8
GAQPS+
Sbjct: 165 GAQPSS 170
>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 GAQPSA 8
GAQPS+
Sbjct: 165 GAQPSS 170
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 IGAQPS 7
+GAQPS
Sbjct: 975 LGAQPS 980
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 GAQPSA 8
GAQPS+
Sbjct: 165 GAQPSS 170
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 GAQPSA 8
GAQPS+
Sbjct: 165 GAQPSS 170
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 IGAQPS 7
+GAQPS
Sbjct: 975 LGAQPS 980
143|SequenceR|720|711|VAETPIIGAQ
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 4 TPIIGAQ 10
TP+IG+Q
Sbjct: 859 TPVIGSQ 865
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 4 TPIIGAQ 10
TP+IG+Q
Sbjct: 859 TPVIGSQ 865
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 TPIIGAQ 10
TP+IG+Q
Sbjct: 859 TPVIGSQ 865
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 4 TPIIGAQ 10
TP+IG+Q
Sbjct: 859 TPVIGSQ 865
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 4 TPIIGAQ 10
TP+IG+Q
Sbjct: 859 TPVIGSQ 865
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 4 TPIIGAQ 10
TP+IG+Q
Sbjct: 859 TPVIGSQ 865
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 4 TPIIGAQ 10
TP+IG+Q
Sbjct: 859 TPVIGSQ 865
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 4 TPIIGAQ 10
TP+IG+Q
Sbjct: 859 TPVIGSQ 865
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 4 TPIIGAQ 10
TP+IG+Q
Sbjct: 859 TPVIGSQ 865
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 AETPII 7
AETPI+
Sbjct: 1067 AETPIL 1072
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 AETPII 7
AETPI+
Sbjct: 1067 AETPIL 1072
>sp|NS3_CVHNL|NON-STRUCTURAL protein 3|Human coronavirus NL63 (HCoV-NL63)
Query: 2 AETPIIG 8
AE P++G
Sbjct: 204 AEEPVVG 210
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VAETPIIGAQ 10
+ + PIIGA+
Sbjct: 1016 LEKEPIIGAE 1025
144|SequenceR|725|716|PIPMAVAETP
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 PIPMAVAETP 10
P PM +TP
Sbjct: 546 PFPMKSDDTP 555
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 PIPMAVAETP 10
P PM TP
Sbjct: 548 PFPMKADNTP 557
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 PIPMAVAETP 10
P PM TP
Sbjct: 547 PFPMKADNTP 556
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 1 PIPMAVAETP 10
P PM TP
Sbjct: 546 PFPMKADNTP 555
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 PIPMAVAETP 10
P PM TP
Sbjct: 545 PFPMKADNTP 554
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 PIPMAVAETP 10
P PM TP
Sbjct: 546 PFPMKADNTP 555
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 PIPMAVAETP 10
P PM TP
Sbjct: 547 PFPMKADNTP 556
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 PIPMAVAETP 10
P PM TP
Sbjct: 548 PFPMKADNTP 557
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 PIPMAVAETP 10
P PM +TP
Sbjct: 549 PFPMKDDDTP 558
>sp|VE2_HPV49|REGULATORY protein E2|Human papillomavirus type 49
Query: 3 PMAVAET 9
PMAV+ET
Sbjct: 61 PMAVSET 67
145|SequenceR|730|721|TPSAAPIPMA
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 1 TPSAAPIPMA 10
TPSAA +P+A
Sbjct: 332 TPSAAYMPLA 341
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 TPSAAPIPMA 10
TP+ P+P+A
Sbjct: 581 TPTVCPVPLA 590
>sp|X_HBVC9|PROTEIN X|Hepatitis B virus genotype C
Query: 1 TPSAAPIP 8
+PSA+P+P
Sbjct: 39 SPSASPVP 46
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PSAAPIPMA 10
PS PIP A
Sbjct: 2893 PSGLPIPQA 2901
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 TPSAAPIPMA 10
TP AP PM+
Sbjct: 696 TPPRAPTPMS 705
>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TPSAAPIP 8
TPS +P+P
Sbjct: 65 TPSRSPVP 72
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 PSAAPIPMA 10
PS PIP A
Sbjct: 2866 PSGFPIPQA 2874
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 PSAAPIPMA 10
PS PIP A
Sbjct: 2871 PSGFPIPQA 2879
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 TPSAAPIPMA 10
TP AP PM+
Sbjct: 696 TPPRAPTPMS 705
146|SequenceR|735|726|APSAPTPSAA
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 PSAPTPSAA 10
P A TP AA
Sbjct: 396 PEADTPKAA 404
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 2 PSAPTPSA 9
P APTPSA
Sbjct: 158 PRAPTPSA 165
Query: 2 PSAPTPSA 9
PSAP+P+A
Sbjct: 163 PSAPSPNA 170
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 1 APSAPTPSA 9
APS PTPS
Sbjct: 120 APSIPTPSG 128
>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58
Query: 1 APSAPTPSA 9
APS PTPS
Sbjct: 120 APSIPTPSG 128
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 2 PSAPTP 7
PSAP P
Sbjct: 145 PSAPGP 150
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 1 APSAPTP 7
APS+P P
Sbjct: 245 APSSPPP 251
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 4 APTPS 8
APTPS
Sbjct: 630 APTPS 634
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 4 APTPS 8
APTPS
Sbjct: 630 APTPS 634
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 4 APTPS 8
APTPS
Sbjct: 630 APTPS 634
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 4 APTPS 8
APTPS
Sbjct: 630 APTPS 634
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 4 APTPS 8
APTPS
Sbjct: 630 APTPS 634
>sp|C_PI3H4|PROTEIN C|Human parainfluenza 3 virus (strain
Query: 3 SAPTP 7
SAPTP
Sbjct: 33 SAPTP 37
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 APSAPTP 7
APS P P
Sbjct: 290 APSKPIP 296
>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48
Query: 3 SAPTPS 8
SAPTPS
Sbjct: 283 SAPTPS 288
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 APTPSAA 10
APTPSAA
Sbjct: 2807 APTPSAA 2813
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 4 APTPSAA 10
APTPSAA
Sbjct: 2780 APTPSAA 2786
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 4 APTPSAA 10
APTPSAA
Sbjct: 2785 APTPSAA 2791
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 PSAPTPSAA 10
P APTP A
Sbjct: 274 PHAPTPEAG 282
>sp|C_MEASY|PROTEIN C|Measles virus (strain Yamagata-1) (MeV)
Query: 1 APSAPTPSA 9
PS P+PSA
Sbjct: 10 GPSRPSPSA 18
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 PSAPTPS 8
P AP PS
Sbjct: 720 PGAPIPS 726
>sp|C_MEASI|PROTEIN C|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 APSAPTPSA 9
PS P+PSA
Sbjct: 10 GPSRPSPSA 18
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 PSAPTPSA 9
PSAPT +A
Sbjct: 456 PSAPTYTA 463
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 SAPTPSAA 10
+APT SAA
Sbjct: 2823 TAPTGSAA 2830
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 SAPTPSAA 10
+APT SAA
Sbjct: 2823 TAPTGSAA 2830
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 SAPTPSAA 10
+APT SAA
Sbjct: 2823 TAPTGSAA 2830
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 SAPTPSAA 10
+APT SAA
Sbjct: 2823 TAPTGSAA 2830
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 SAPTPSAA 10
+APT SAA
Sbjct: 2823 TAPTGSAA 2830
147|SequenceR|740|731|VARNSAPSAP
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 ARNSAPSAP 10
R++AP+AP
Sbjct: 837 GRSAAPNAP 845
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 4 NSAPSAP 10
+S PSAP
Sbjct: 142 SSTPSAP 148
>sp|SF33K_ADE02|PROTEIN 33K|Human adenovirus C serotype 2
Query: 1 VARNSAPSAP 10
+A SAP AP
Sbjct: 76 IATTSAPQAP 85
>sp|PKG2_ADE02|PACKAGING protein 2|Human adenovirus C serotype 2
Query: 1 VARNSAPSAP 10
+A SAP AP
Sbjct: 76 IATTSAPQAP 85
>sp|TAT_HV2D2|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 5 SAPSAP 10
+APSAP
Sbjct: 90 TAPSAP 95
148|SequenceR|745|736|ESSPTVARNS
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 ESSPTVARN 9
ESSPT +RN
Sbjct: 413 ESSPTFSRN 421
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 ESSPTVARN 9
ESSPT +RN
Sbjct: 413 ESSPTFSRN 421
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 2 SSPTVARN 9
S PTVAR
Sbjct: 6 SEPTVARQ 13
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 2 SSPTVAR 8
S PTVAR
Sbjct: 6 SEPTVAR 12
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 2 SSPTVAR 8
S PTVAR
Sbjct: 6 SEPTVAR 12
>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)
Query: 2 SSPTVAR 8
S PTVAR
Sbjct: 356 SCPTVAR 362
149|SequenceR|750|741|RSDKAESSPT
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RSDKAESSPT 10
RSDKAE+ T
Sbjct: 439 RSDKAEAQST 448
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RSDKAESSPT 10
RSDKAE+ T
Sbjct: 439 RSDKAEAQST 448
150|SequenceR|755|746|RQDQLRSDKA
***** No hits found ******
151|SequenceR|760|751|APSNQRQDQL
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 APSNQRQDQL 10
APS Q+QL
Sbjct: 1165 APSQSDQEQL 1174
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 APSNQRQDQL 10
APS Q+QL
Sbjct: 1173 APSQSDQEQL 1182
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 APSNQRQDQL 10
APS Q+QL
Sbjct: 1167 APSQSDQEQL 1176
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 APSNQRQDQL 10
APS Q+QL
Sbjct: 1185 APSQSDQEQL 1194
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 APSNQRQDQL 10
APS Q+QL
Sbjct: 1165 APSQSDQEQL 1174
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 APSNQRQDQL 10
APS Q+QL
Sbjct: 1167 APSQSDQEQL 1176
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 APSNQRQDQL 10
APS Q+QL
Sbjct: 1169 APSQSDQEQL 1178
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 APSNQRQDQL 10
APS Q+QL
Sbjct: 1175 APSQSDQEQL 1184
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 APSNQRQDQL 10
APS Q+QL
Sbjct: 1176 APSQSDQEQL 1185
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 APSNQRQDQL 10
APS Q+QL
Sbjct: 1167 APSQSDQEQL 1176
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 APSNQRQDQL 10
APS Q+QL
Sbjct: 1177 APSQSDQEQL 1186
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 APSNQRQDQL 10
APS Q+QL
Sbjct: 1178 APSQSDQEQL 1187
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 APSNQRQDQL 10
APS Q+QL
Sbjct: 1166 APSQSDQEQL 1175
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 APSNQRQDQL 10
APS Q+QL
Sbjct: 1183 APSQSDQEQL 1192
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 APSNQRQDQL 10
APS Q+QL
Sbjct: 1164 APSQSDQEQL 1173
>sp|ICP47_HHV2H|ICP47 protein|Human herpesvirus 2 (strain HG52)
Query: 1 APSNQRQDQL 10
A SN+RQD++
Sbjct: 74 ARSNERQDRV 83
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 APSNQRQDQL 10
APS Q+QL
Sbjct: 1175 APSQGDQEQL 1184
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 APSNQRQDQL 10
APS Q+QL
Sbjct: 1166 APSQGDQEQL 1175
>sp|EBNA2_EBVG|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PSNQRQDQL 10
PSN Q+QL
Sbjct: 32 PSNPYQEQL 40
>sp|EBNA2_EBVB9|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PSNQRQDQL 10
PSN Q+QL
Sbjct: 32 PSNPYQEQL 40
152|SequenceR|765|756|NEKNGAPSNQ
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 2 EKNGAPSN 9
E+NG P N
Sbjct: 149 ERNGEPEN 156
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 EKNGAP 7
EKNG P
Sbjct: 330 EKNGCP 335
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EKNGAP 7
EKNG P
Sbjct: 330 EKNGCP 335
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 EKNGAP 7
EKNG P
Sbjct: 330 EKNGCP 335
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 2 EKNGAPSN 9
EK+G P N
Sbjct: 151 EKHGVPEN 158
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 2 EKNGAPSN 9
EK+G P N
Sbjct: 151 EKHGVPEN 158
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 3 KNGAPS 8
+NGAPS
Sbjct: 410 RNGAPS 415
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 2 EKNGAPSN 9
EK+G P N
Sbjct: 149 EKHGDPEN 156
>sp|YVDD_VACCC|UNCHARACTERIZED 7.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 EKNGAPSNQ 10
EK+G P Q
Sbjct: 13 EKHGLPMTQ 21
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 2 EKNGAPS 8
E+NG PS
Sbjct: 642 EENGNPS 648
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 2 EKNGAPS 8
E+NG PS
Sbjct: 640 EENGEPS 646
153|SequenceR|770|761|ENPKINEKNG
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 ENPKINEKNG 10
++PK NEKN
Sbjct: 933 QDPKRNEKNA 942
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 NPKINEKN 9
NPK +KN
Sbjct: 4 NPKPQKKN 11
>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)
Query: 1 ENPKINEKNG 10
E K+NEK+
Sbjct: 13 ETTKLNEKDA 22
154|SequenceR|775|766|FSPSTENPKI
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 3 PSTENPKI 10
PSTENP +
Sbjct: 122 PSTENPTV 129
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 FSPSTENPK 9
F PSTE K
Sbjct: 474 FQPSTEQLK 482
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 2 SPSTENP 8
SP T+NP
Sbjct: 265 SPQTDNP 271
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 3 PSTENPKI 10
PST+ PK+
Sbjct: 226 PSTDLPKV 233
155|SequenceR|780|771|NEAKSFSPST
>sp|SPIKE_ADE1A|FIBER protein|Human adenovirus B serotype 11
Query: 3 AKSFSPST 10
AKSF PST
Sbjct: 232 AKSFMPST 239
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 NEAKSFSPST 10
N+ K FSP T
Sbjct: 9 NKLKEFSPGT 18
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
EA+ FSP
Sbjct: 443 EAREFSP 449
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 160 EEKAFSP 166
>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11
Query: 3 AKSFSPST 10
AK F PST
Sbjct: 232 AKGFMPST 239
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
EA+ FSP
Sbjct: 445 EARKFSP 451
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 160 EEKAFSP 166
>sp|SPIKE_ADE07|FIBER protein|Human adenovirus B serotype 7
Query: 3 AKSFSPST 10
AK F PST
Sbjct: 250 AKGFMPST 257
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 162 EEKAFSP 168
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 160 EEKAFSP 166
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 160 EEKAFSP 166
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 156 EEKAFSP 162
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 160 EEKAFSP 166
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 156 EEKAFSP 162
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 158 EEKAFSP 164
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 160 EEKAFSP 166
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 160 EEKAFSP 166
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 160 EEKAFSP 166
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 159 EEKAFSP 165
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 156 EEKAFSP 162
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 162 EEKAFSP 168
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 161 EEKAFSP 167
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 156 EEKAFSP 162
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 160 EEKAFSP 166
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 166 EEKAFSP 172
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 160 EEKAFSP 166
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 162 EEKAFSP 168
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 160 EEKAFSP 166
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 160 EEKAFSP 166
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 156 EEKAFSP 162
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 157 EEKAFSP 163
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 160 EEKAFSP 166
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 160 EEKAFSP 166
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 163 EEKAFSP 169
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 160 EEKAFSP 166
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 158 EEKAFSP 164
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 160 EEKAFSP 166
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAKSFSP 8
E K+FSP
Sbjct: 160 EEKAFSP 166
156|SequenceR|785|776|PSIGKNEAKS
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 PSIGKNEAKS 10
PS+GK+ K+
Sbjct: 83 PSVGKDPKKT 92
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 PSIGKNEAKS 10
PS+GK+ K+
Sbjct: 83 PSVGKDPKKT 92
>sp|NSP5_ROTAD|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/United
Query: 2 SIGKNE 7
SIG+NE
Sbjct: 33 SIGRNE 38
>sp|NSP5_ROTAM|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/United
Query: 2 SIGKNE 7
SIG+NE
Sbjct: 33 SIGRNE 38
>sp|NSP5_ROTHW|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/United
Query: 2 SIGKNE 7
SIG+NE
Sbjct: 33 SIGRNE 38
>sp|NSP5_ROTHK|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 2 SIGKNE 7
SIG+NE
Sbjct: 33 SIGRNE 38
>sp|NSP5_ROT41|NON-STRUCTURAL protein 5|Rotavirus A (isolate
Query: 2 SIGKNE 7
SIG+NE
Sbjct: 33 SIGRNE 38
>sp|VE2_HPV38|REGULATORY protein E2|Human papillomavirus 38
Query: 1 PSIGKNEAKS 10
PS+ +EAK+
Sbjct: 60 PSLASSEAKA 69
157|SequenceR|790|781|HESVVPSIGK
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 ESVVPSIG 9
E+VVPSIG
Sbjct: 291 ETVVPSIG 298
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 HESVVPSIG 9
H++VVP +G
Sbjct: 56 HQTVVPGVG 64
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 1 HESVVPSIG 9
H++VVP +G
Sbjct: 56 HQTVVPGVG 64
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 HESVVPSIG 9
H++V+P IG
Sbjct: 64 HQAVIPGIG 72
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 1 HESVVPSIG 9
H+S VPS G
Sbjct: 219 HQSFVPSPG 227
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HESVVPSIGK 10
H++ +P +GK
Sbjct: 29 HDACIPVVGK 38
>sp|PHOSP_ISFV|PHOSPHOPROTEIN virus (ISFV)
Query: 2 ESVVPSIGK 10
E+++PSIG+
Sbjct: 158 ENMIPSIGR 166
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 HESVVPS 7
HE VVP+
Sbjct: 43 HEDVVPT 49
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 1 HESVVPSIG 9
++V+P+IG
Sbjct: 226 QQTVIPNIG 234
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 1 HESVVPSIG 9
++V+P+IG
Sbjct: 210 QQTVIPNIG 218
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 HESVVPSIG 9
++V+P+IG
Sbjct: 226 QQTVIPNIG 234
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SVVPSIG 9
SV+P+IG
Sbjct: 1424 SVIPTIG 1430
>sp|VIF_HV2D2|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 HESVVPSI 8
HE VPS+
Sbjct: 141 HEGQVPSL 148
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 HESVVPSI 8
H+S VPS+
Sbjct: 141 HKSKVPSL 148
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 1 HESVVPSIG 9
++++P+IG
Sbjct: 226 QQTIIPNIG 234
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 HESVVPSIG 9
++++P+IG
Sbjct: 210 QQTIIPNIG 218
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 HESVVPSIG 9
++++P+IG
Sbjct: 226 QQTIIPNIG 234
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 1 HESVVPSIG 9
++++P+IG
Sbjct: 210 QQTIIPNIG 218
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 HESVVPSIG 9
++++P+IG
Sbjct: 226 QQTIIPNIG 234
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 HESVVPSIG 9
++++P+IG
Sbjct: 210 QQTIIPNIG 218
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 1 HESVVPSIG 9
++++P+IG
Sbjct: 226 QQTIIPNIG 234
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 1 HESVVPSIG 9
++++P+IG
Sbjct: 226 QQTIIPNIG 234
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 1 HESVVPSIG 9
++++P+IG
Sbjct: 226 QQTIIPNIG 234
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 1 HESVVPSIG 9
++++P+IG
Sbjct: 226 QQTIIPNIG 234
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 1 HESVVPSIG 9
++++P+IG
Sbjct: 226 QQTIIPNIG 234
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 1 HESVVPSIG 9
++++P+IG
Sbjct: 226 QQTIIPNIG 234
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 HESVVPSIG 9
++++P+IG
Sbjct: 226 QQTIIPNIG 234
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 1 HESVVPSIG 9
++++P+IG
Sbjct: 226 QQTIIPNIG 234
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 1 HESVVPSIG 9
++++P+IG
Sbjct: 226 QQTIIPNIG 234
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 ESVVPSIG 9
ES++PS G
Sbjct: 205 ESIIPSNG 212
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 HESVVPSI 8
H S VPS+
Sbjct: 141 HRSQVPSL 148
>sp|VIF_HV2UC|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 HESVVPSI 8
HE VPS+
Sbjct: 141 HEGQVPSL 148
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 3 SVVPSIGK 10
SV+ SIGK
Sbjct: 109 SVIISIGK 116
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 SVVPSIGK 10
SV+ SIGK
Sbjct: 109 SVIISIGK 116
>sp|VE4_HPV6C|PROBABLE protein E4|Human papillomavirus type 6c
Query: 4 VVPSIGK 10
VVP IGK
Sbjct: 2 VVPIIGK 8
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 HESVVPSI 8
H S VPS+
Sbjct: 141 HRSQVPSL 148
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 1 HESVVPSIG 9
++++P+IG
Sbjct: 210 QQTIIPNIG 218
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 1 HESVVPSIG 9
++++P+IG
Sbjct: 210 QQTIIPNIG 218
158|SequenceR|795|786|DIQKRHESVV
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 1 DIQKRHESVV 10
DIQ+RH V+
Sbjct: 221 DIQQRHVLVI 230
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 2 IQKRHE 7
IQKRH+
Sbjct: 29 IQKRHQ 34
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 2 IQKRHE 7
IQKRH+
Sbjct: 29 IQKRHQ 34
>sp|C_PI1HB|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 1 DIQKRHESV 9
D QKR+E V
Sbjct: 169 DFQKRYEEV 177
>sp|C_PI1HC|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 1 DIQKRHESV 9
D QKR+E V
Sbjct: 169 DFQKRYEEV 177
>sp|C_PI1HE|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 1 DIQKRHESV 9
D QKR+E V
Sbjct: 169 DFQKRYEEV 177
>sp|C_PI1HD|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 1 DIQKRHESV 9
D QKR+E V
Sbjct: 169 DFQKRYEEV 177
159|SequenceR|800|791|FKKLDDIQKR
>sp|PG132_VACCC|VIRION morphogenesis protein OPG132|Vaccinia virus (strain Copenhagen)
Query: 1 FKKLDDIQKR 10
+ KLDD++K
Sbjct: 89 YNKLDDVEKE 98
>sp|PG132_MONPV|VIRION morphogenesis protein OPG132|Monkeypox virus (MPXV)
Query: 1 FKKLDDIQKR 10
+ KLDD++K
Sbjct: 89 YNKLDDVEKE 98
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 FKKLDDIQKR 10
F+KL DI+ R
Sbjct: 1355 FRKLPDIRLR 1364
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 FKKLDDIQKR 10
F+KL DI+ R
Sbjct: 1355 FRKLPDIRLR 1364
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 FKKLDDIQKR 10
F+KL DI+ R
Sbjct: 1356 FRKLPDIRLR 1365
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 FKKLDDIQKR 10
F+KL DI+ R
Sbjct: 1355 FQKLPDIRLR 1364
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 FKKLDDIQKR 10
F+KL DI+ R
Sbjct: 1355 FQKLPDIRLR 1364
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 1 FKKLDDIQ 8
F KLDD +
Sbjct: 122 FNKLDDTE 129
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 FKKLDDIQKR 10
F+KL DI+ R
Sbjct: 1355 FQKLPDIRLR 1364
>sp|U79_HHV7J|PROTEIN U79|Human herpesvirus 7 (strain JI)
Query: 2 KKLDDIQKR 10
K++DD +KR
Sbjct: 187 KRMDDTEKR 195
Query: 2 KKLDDIQKR 10
K++DD +KR
Sbjct: 210 KRVDDTEKR 218
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 KKLDDIQ 8
KKLDDI+
Sbjct: 462 KKLDDIE 468
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 1 FKKLDDIQ 8
F KLDD +
Sbjct: 130 FNKLDDTE 137
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 KKLDDIQ 8
KKLDDI+
Sbjct: 462 KKLDDIE 468
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 1 FKKLDDIQ 8
F KLDD +
Sbjct: 121 FNKLDDTE 128
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 KKLDDIQ 8
KKLDDI+
Sbjct: 462 KKLDDIE 468
>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)
Query: 1 FKKLDD 6
F+KLDD
Sbjct: 29 FEKLDD 34
>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 FKKLDDI 7
FK+ DDI
Sbjct: 118 FKEYDDI 124
>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 1 FKKLDDI 7
FK+ DDI
Sbjct: 118 FKEYDDI 124
>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FKKLDD 6
F+KLDD
Sbjct: 29 FEKLDD 34
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 FKKLDDIQKR 10
F KLD +KR
Sbjct: 1237 FLKLDQHRKR 1246
160|SequenceR|805|796|RFDNKFKKLD
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 4 NKFKKLD 10
N+FKKLD
Sbjct: 2057 NEFKKLD 2063
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 FDNKFKK 8
FD+KF+K
Sbjct: 2402 FDSKFEK 2408
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 1 RFDNKF 6
R+DNKF
Sbjct: 10 RYDNKF 15
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RFDNKF 6
R+DNKF
Sbjct: 10 RYDNKF 15
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 1 RFDNKFKK 8
+F+N+F K
Sbjct: 43 KFNNRFNK 50
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 FDNKFK 7
FD KFK
Sbjct: 425 FDGKFK 430
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 FDNKFKKL 9
F KFKK+
Sbjct: 3545 FQGKFKKI 3552
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 FDNKFKKL 9
F KFKK+
Sbjct: 3545 FQGKFKKI 3552
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 DNKFKKL 9
DN+ KKL
Sbjct: 910 DNRLKKL 916
>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)
Query: 3 DNKFKKLD 10
DNK+ K+D
Sbjct: 8 DNKYPKVD 15
>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DNKFKKLD 10
DNK+ K+D
Sbjct: 8 DNKYPKVD 15
>sp|PG115_VACCA|CORE protein OPG115|Vaccinia virus (strain Ankara) (VACV)
Query: 3 DNKFKKLD 10
DNK+ K+D
Sbjct: 8 DNKYPKVD 15
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 5 KFKKLD 10
+FKKLD
Sbjct: 2058 EFKKLD 2063
>sp|PG115_MONPV|CORE protein OPG115|Monkeypox virus (MPXV)
Query: 3 DNKFKKLD 10
DNK+ K+D
Sbjct: 8 DNKYPKVD 15
>sp|D3_VARV|CORE protein D3|Variola virus
Query: 3 DNKFKKLD 10
DNK+ K+D
Sbjct: 8 DNKYPKVD 15
>sp|D3_VAR67|CORE protein D3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 DNKFKKLD 10
DNK+ K+D
Sbjct: 8 DNKYPKVD 15
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 FDNKFKK 8
+D+KF+K
Sbjct: 2402 YDSKFEK 2408
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 FDNKFKK 8
+D+KF+K
Sbjct: 2402 YDSKFEK 2408
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 FDNKFKK 8
+D+KF+K
Sbjct: 2402 YDSKFEK 2408
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 FDNKFKK 8
+D+KF+K
Sbjct: 2402 YDSKFEK 2408
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 2 FDNKFK 7
F NKFK
Sbjct: 139 FTNKFK 144
161|SequenceR|810|801|SSPQLRFDNK
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SSPQLRFD 8
S+P+LRF+
Sbjct: 551 SNPRLRFE 558
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 SSPQLRFD 8
SSP+ +FD
Sbjct: 459 SSPEAQFD 466
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 SSPQLRFDN 9
SSP L+F +
Sbjct: 752 SSPSLKFTD 760
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 SSPQLRFDN 9
SSP L+F +
Sbjct: 752 SSPSLKFTD 760
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SPQLRFDN 9
SP L FD+
Sbjct: 294 SPSLEFDD 301
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 2 SPQLRFDN 9
SP L FD+
Sbjct: 294 SPSLEFDD 301
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 3 PQLRFDN 9
P L FDN
Sbjct: 165 PDLNFDN 171
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 3 PQLRFDN 9
P L FDN
Sbjct: 165 PDLNFDN 171
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 3 PQLRFDN 9
P L FDN
Sbjct: 165 PDLNFDN 171
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 3 PQLRFDN 9
P L FDN
Sbjct: 165 PDLNFDN 171
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 SSPQLRFDN 9
S P+LR+ N
Sbjct: 218 SGPKLRYFN 226
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 PQLRFDNK 10
PQL+ D K
Sbjct: 388 PQLKADTK 395
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PQLRFDNK 10
P+LR+D +
Sbjct: 236 PKLRYDKQ 243
162|SequenceR|815|806|MSESTSSPQL
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 4 STSSPQ 9
STSSPQ
Sbjct: 1154 STSSPQ 1159
163|SequenceR|820|811|NLLQDMSEST
>sp|PHOSP_PI4HA|PHOSPHOPROTEIN parainfluenza 4a virus (strain
Query: 3 LQDMSEST 10
LQD+ EST
Sbjct: 176 LQDIEEST 183
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 NLLQDMSES 9
NL+ D+SES
Sbjct: 359 NLMVDISES 367
>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)
Query: 2 LLQDMSES 9
+LQ+MSE+
Sbjct: 522 ILQEMSET 529
>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus
Query: 2 LLQDMSES 9
+LQ+MSE+
Sbjct: 522 ILQEMSET 529
>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate
Query: 2 LLQDMSES 9
+LQ+MSE+
Sbjct: 522 ILQEMSET 529
>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 LLQDMSES 9
+LQ+MSE+
Sbjct: 522 ILQEMSET 529
>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LLQDMSES 9
+LQ+MSE+
Sbjct: 522 ILQEMSET 529
>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)
Query: 2 LLQDMSES 9
+LQ+MSE+
Sbjct: 522 ILQEMSET 529
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LLQDMSEST 10
L+D+SES+
Sbjct: 496 FLRDLSESS 504
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LLQDMSEST 10
L+D+SES+
Sbjct: 496 FLRDLSESS 504
164|SequenceR|825|816|GERNKNLLQD
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 2 ERNKNLLQ 9
+RN+NL+Q
Sbjct: 483 DRNQNLMQ 490
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 GERNKNLL 8
GE+N NL+
Sbjct: 431 GEKNYNLI 438
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 GERNKNLLQ 9
GE KN L+
Sbjct: 2032 GEEKKNFLE 2040
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 GERNKNLLQ 9
GE KN L+
Sbjct: 2032 GEEKKNFLE 2040
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 GERNKNLLQ 9
GE KN L+
Sbjct: 2032 GEEKKNFLE 2040
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 GERNKNLLQ 9
GE KN L+
Sbjct: 2032 GEEKKNFLE 2040
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 GERNKNLLQ 9
GE KN L+
Sbjct: 2033 GEERKNFLE 2041
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 GERNKNLLQ 9
GE KN L+
Sbjct: 2029 GEERKNFLE 2037
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 GERNKNLLQ 9
GE KN L+
Sbjct: 2033 GEERKNFLE 2041
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 4 NKNLLQD 10
N NLL+D
Sbjct: 428 NANLLED 434
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 GERNKNL 7
G+RN NL
Sbjct: 423 GKRNANL 429
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 NKNLLQD 10
NKNL+ D
Sbjct: 150 NKNLIND 156
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GERNKN 6
GERNK+
Sbjct: 185 GERNKS 190
165|SequenceR|830|821|DRSKEGERNK
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 EGERNK 10
EGERNK
Sbjct: 184 EGERNK 189
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 SKEGERNK 10
+KEGER K
Sbjct: 2059 TKEGERKK 2066
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 SKEGERNK 10
+KEGER K
Sbjct: 2059 TKEGERKK 2066
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 SKEGERNK 10
+KEGER K
Sbjct: 2058 TKEGERKK 2065
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 SKEGERNK 10
+KEGER K
Sbjct: 2057 TKEGERKK 2064
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 SKEGERNK 10
+KEGER K
Sbjct: 2058 TKEGERKK 2065
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 SKEGERNK 10
+KEGER K
Sbjct: 2058 TKEGERKK 2065
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 SKEGERNK 10
+KEGER K
Sbjct: 2058 TKEGERKK 2065
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 SKEGERNK 10
+KEGER K
Sbjct: 2058 TKEGERKK 2065
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 SKEGERNK 10
+KEGER K
Sbjct: 2058 TKEGERKK 2065
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 SKEGERNK 10
+KEGER K
Sbjct: 1648 TKEGERKK 1655
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 SKEGERNK 10
+KEGER K
Sbjct: 2058 TKEGERKK 2065
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 SKEGERNK 10
+KEGER K
Sbjct: 2058 TKEGERKK 2065
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 SKEGERNK 10
+KEGE+ K
Sbjct: 2057 TKEGEKKK 2064
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 SKEGERNK 10
+KEGE+ K
Sbjct: 2057 TKEGEKKK 2064
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 SKEGERNK 10
+KEGE+ K
Sbjct: 2057 TKEGEKKK 2064
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 SKEGERNK 10
+KEGE+ K
Sbjct: 2057 TKEGEKKK 2064
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 4 KEGERN 9
KEGER+
Sbjct: 2032 KEGERD 2037
166|SequenceR|835|826|KDKILDRSKE
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 DKILDRSKE 10
DK+L RSKE
Sbjct: 1260 DKLLIRSKE 1268
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 KDKILDRSKE 10
K+K+L ++KE
Sbjct: 1133 KNKVLPQAKE 1142
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 1 KDKILDRSKE 10
KD+++D SK+
Sbjct: 206 KDELIDASKQ 215
167|SequenceR|840|831|ASPEIKDKIL
>sp|PAP1_VARV|POLY(A) polymerase catalytic subunit|Variola virus
Query: 1 ASPEIKDKIL 10
++ EIKD+IL
Sbjct: 70 SASEIKDRIL 79
>sp|PAP1_VAR67|POLY(A) polymerase catalytic subunit|Variola virus (isolate
Query: 1 ASPEIKDKIL 10
++ EIKD+IL
Sbjct: 70 SASEIKDRIL 79
>sp|PG077_VACCT|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Tian Tan)
Query: 2 SPEIKDKIL 10
SP++KD I+
Sbjct: 199 SPQVKDNII 207
>sp|PG077_VACCP|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 SPEIKDKIL 10
SP++KD I+
Sbjct: 199 SPQVKDNII 207
>sp|PG077_VACCC|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SPEIKDKIL 10
SP++KD I+
Sbjct: 199 SPQVKDNII 207
>sp|PG077_MONPZ|TELOMERE-BINDING protein OPG077|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 2 SPEIKDKIL 10
SP++KD I+
Sbjct: 199 SPQVKDNII 207
>sp|PG077_MONPV|TELOMERE-BINDING protein OPG077|Monkeypox virus (MPXV)
Query: 2 SPEIKDKIL 10
SP++KD I+
Sbjct: 199 SPQVKDNII 207
>sp|PG077_VAR67|TELOMERE-BINDING protein OPG077|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 SPEIKDKIL 10
SP++KD I+
Sbjct: 199 SPQVKDNII 207
>sp|PG077_VACCA|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Ankara) (VACV)
Query: 2 SPEIKDKIL 10
SP++KD I+
Sbjct: 199 SPQVKDNII 207
>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)
Query: 1 ASPEIKDKIL 10
++ EIKD+IL
Sbjct: 70 SASEIKDRIL 79
>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 1 ASPEIKDKIL 10
++ EIKD+IL
Sbjct: 70 SASEIKDRIL 79
>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara)
Query: 1 ASPEIKDKIL 10
++ EIKD+IL
Sbjct: 70 SASEIKDRIL 79
>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 1 ASPEIKDKIL 10
++ EIKD+IL
Sbjct: 70 SASEIKDRIL 79
>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)
Query: 1 ASPEIKDKIL 10
++ EIKD+IL
Sbjct: 70 SASEIKDRIL 79
>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)
Query: 1 ASPEIKDKIL 10
++ EIKD+IL
Sbjct: 70 SASEIKDRIL 79
>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 1 ASPEIKDKIL 10
++ EIKD+IL
Sbjct: 70 SASEIKDRIL 79
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 PEIKDKI 9
PE KDK+
Sbjct: 1163 PEAKDKV 1169
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 PEIKDKI 9
PE KDK+
Sbjct: 1170 PEAKDKV 1176
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 3 PEIKDKI 9
P IKD+I
Sbjct: 1066 PSIKDRI 1072
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 3 PEIKDKI 9
P IKD+I
Sbjct: 1066 PSIKDRI 1072
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 3 PEIKDKI 9
P IKD+I
Sbjct: 1066 PSIKDRI 1072
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 3 PEIKDKI 9
P IKD+I
Sbjct: 1066 PSIKDRI 1072
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 3 PEIKDKI 9
P IKD+I
Sbjct: 1071 PSIKDRI 1077
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 3 PEIKDKI 9
P IKD+I
Sbjct: 1071 PSIKDRI 1077
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SPEIKDKIL 10
+PEI+D I
Sbjct: 1650 NPEIEDDIF 1658
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SPEIKDKIL 10
+PEI+D I
Sbjct: 1650 NPEIEDDIF 1658
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SPEIKDKIL 10
+PEI+D I
Sbjct: 1650 NPEIEDDIF 1658
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SPEIKDKIL 10
+PEI+D I
Sbjct: 1650 NPEIEDDIF 1658
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SPEIKDKIL 10
+PEI+D I
Sbjct: 1650 NPEIEDDIF 1658
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 SPEIKDKIL 10
+PEI+D I
Sbjct: 1650 NPEIEDDIF 1658
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SPEIKDKIL 10
+PEI+D I
Sbjct: 1650 NPEIEDDIF 1658
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 SPEIKDK 8
SPE+ DK
Sbjct: 2057 SPELSDK 2063
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SPEIKDKIL 10
+PEI+D I
Sbjct: 1240 NPEIEDDIF 1248
>sp|VIF_HV1YF|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 PEIKDKIL 10
PE+ DK++
Sbjct: 100 PEMADKLI 107
>sp|VIF_HV1YB|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 PEIKDKIL 10
PE+ DK++
Sbjct: 100 PEMADKLI 107
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 2 SPEIKD 7
SPE KD
Sbjct: 453 SPEFKD 458
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 PEIKDK 8
PE+K+K
Sbjct: 1147 PEVKEK 1152
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 PEIKDK 8
PE+K+K
Sbjct: 1146 PEVKEK 1151
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 PEIKDK 8
PE+K+K
Sbjct: 1137 PEVKEK 1142
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 PEIKDK 8
PE+K+K
Sbjct: 1137 PEVKEK 1142
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 PEIKDK 8
PE+K+K
Sbjct: 1138 PEVKEK 1143
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 PEIKDK 8
PE+K+K
Sbjct: 1136 PEVKEK 1141
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 PEIKDK 8
PE+K+K
Sbjct: 1136 PEVKEK 1141
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 PEIKDK 8
PE+K+K
Sbjct: 1135 PEVKEK 1140
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 PEIKDK 8
PE+K+K
Sbjct: 1156 PEVKEK 1161
>sp|NEP_INCJJ|NUCLEAR export protein|Influenza C virus (strain C/JJ/1950)
Query: 5 IKDKIL 10
IKDKIL
Sbjct: 60 IKDKIL 65
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 PEIKDK 8
PE+K+K
Sbjct: 1146 PEVKEK 1151
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 PEIKDK 8
PE+K+K
Sbjct: 1140 PEVKEK 1145
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 PEIKDK 8
PE+K+K
Sbjct: 1149 PEVKEK 1154
168|SequenceR|845|836|IFSDKASPEI
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 IFSDKASPEI 10
+F+D +SP +
Sbjct: 1209 VFTDNSSPPV 1218
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IFSDKASP 8
+F+D +SP
Sbjct: 1209 VFTDNSSP 1216
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IFSDKASP 8
+F+D +SP
Sbjct: 1209 VFTDNSSP 1216
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 IFSDKASP 8
+F+D +SP
Sbjct: 1209 VFTDNSSP 1216
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 IFSDKASP 8
+F+D +SP
Sbjct: 1209 VFTDNSSP 1216
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IFSDKASP 8
+F+D +SP
Sbjct: 1209 VFTDNSSP 1216
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 IFSDKASP 8
+F+D +SP
Sbjct: 1209 VFTDNSSP 1216
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 IFSDKASP 8
+F+D +SP
Sbjct: 1214 VFTDNSSP 1221
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IFSDKASP 8
+F+D +SP
Sbjct: 1209 VFTDNSSP 1216
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IFSDKASP 8
+F+D +SP
Sbjct: 1209 VFTDNSSP 1216
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IFSDKASP 8
+F+D +SP
Sbjct: 1209 VFTDNSSP 1216
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IFSDKASP 8
+F+D +SP
Sbjct: 1209 VFTDNSSP 1216
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IFSDKASP 8
+F+D +SP
Sbjct: 1209 VFTDNSSP 1216
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IFSDKASPEI 10
I +DK PEI
Sbjct: 455 ILADKYIPEI 464
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 FSDKASP 8
FSD SP
Sbjct: 1211 FSDNTSP 1217
>sp|B8_HHV6Z|PROTEIN B8|Human herpesvirus 6B (strain Z29)
Query: 1 IFSDKASPE 9
+FSDKA +
Sbjct: 153 VFSDKAKDQ 161
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 IFSDKASP 8
IFS ASP
Sbjct: 4 IFSRSASP 11
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 FSDKASPEI 10
+ DK PEI
Sbjct: 29 YLDKVEPEI 37
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 IFSDKASP 8
IFS ASP
Sbjct: 4 IFSRSASP 11
>sp|MATRX_NIPAV|MATRIX protein|Nipah virus
Query: 2 FSDKASPEI 10
+ DK PEI
Sbjct: 29 YLDKVEPEI 37
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 IFSDKASP 8
+FSD SP
Sbjct: 1699 VFSDVKSP 1706
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 IFSDKASP 8
IFS ASP
Sbjct: 4 IFSRSASP 11
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 IFSDKASP 8
IFS ASP
Sbjct: 4 IFSRSASP 11
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 IFSDKASP 8
IFS ASP
Sbjct: 4 IFSRSASP 11
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 IFSDKASP 8
IFS ASP
Sbjct: 4 IFSRSASP 11
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 1 IFSDKASPEI 10
+F DK P I
Sbjct: 190 VFRDKLFPSI 199
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 IFSDKASP 8
IFS ASP
Sbjct: 4 IFSRSASP 11
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 1 IFSDKASPEI 10
+F DK P I
Sbjct: 190 VFRDKLFPSI 199
169|SequenceR|850|841|SSSNEIFSDK
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 SSSNEIFSDK 10
+ NE+FS+K
Sbjct: 2088 AGRNEVFSNK 2097
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 SSSNEIFSDK 10
+ NE+FS+K
Sbjct: 2088 AGRNEVFSNK 2097
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 EIFSDK 10
E+FSDK
Sbjct: 54 EVFSDK 59
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 SSSNEIFSDK 10
+ NE+FS+K
Sbjct: 2088 AGRNEVFSNK 2097
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 EIFSDK 10
E+FSDK
Sbjct: 54 EVFSDK 59
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 EIFSDK 10
E+FSDK
Sbjct: 54 EVFSDK 59
170|SequenceR|855|846|GSTCNSSSNE
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 1 GSTCNSSS 8
G+TCN SS
Sbjct: 279 GTTCNGSS 286
>sp|M2_I69A0|MATRIX protein 2|Influenza A virus (strain A/England/878/1969
Query: 1 GSTCNSSSN 9
G CN SSN
Sbjct: 16 GCRCNDSSN 24
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 1 GSTCNSSS 8
G+TCN SS
Sbjct: 185 GTTCNGSS 192
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 STCNSSS 8
S+CNSSS
Sbjct: 295 SSCNSSS 301
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 CNSSSNE 10
CNS+ NE
Sbjct: 690 CNSTKNE 696
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 4 CNSSSNE 10
CNS+ NE
Sbjct: 691 CNSTKNE 697
171|SequenceR|860|851|NPKSSGSTCN
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 PKSSGSTCN 10
PKS TCN
Sbjct: 3343 PKSIDKTCN 3351
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 NPKSSGSTCN 10
NP+S+ + CN
Sbjct: 1980 NPESAVAACN 1989
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 NPKSSGSTCN 10
NP+S+ + CN
Sbjct: 1980 NPESAVAACN 1989
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 KSSGSTC 9
KSS STC
Sbjct: 32 KSSNSTC 38
>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 KSSGSTC 9
KSS STC
Sbjct: 32 KSSNSTC 38
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 NPKSSGSTCN 10
NP G CN
Sbjct: 1384 NPLKGGLNCN 1393
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 NPKSSGSTCN 10
NP G CN
Sbjct: 1384 NPLKGGLNCN 1393
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 NPKSSGSTCN 10
NP+++ + CN
Sbjct: 2019 NPETAVAVCN 2028
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 NPKSSGSTCN 10
NP+++ + CN
Sbjct: 2020 NPETAVAVCN 2029
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 NPKSSGSTCN 10
NP+++ + CN
Sbjct: 2019 NPETAVAVCN 2028
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 NPKSSGSTCN 10
NP G CN
Sbjct: 1382 NPLKGGLNCN 1391
>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 NPKSSGSTC 9
NPK + S+C
Sbjct: 56 NPKENKSSC 64
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 PKSSGSTCN 10
P+S S CN
Sbjct: 208 PRSQESKCN 216
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 NPKSSGSTCN 10
NP G CN
Sbjct: 1382 NPLRGGLNCN 1391
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 PKSSGSTCN 10
P+S S CN
Sbjct: 208 PRSQESKCN 216
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 2 PKSSGSTCN 10
P+S S CN
Sbjct: 208 PRSQESKCN 216
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 PKSSGSTCN 10
P+S S CN
Sbjct: 208 PRSQESKCN 216
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 PKSSGSTCN 10
P+S S CN
Sbjct: 208 PRSQESKCN 216
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 PKSSGSTCN 10
P+S S CN
Sbjct: 208 PRSQESKCN 216
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 PKSSGSTCN 10
P+S S CN
Sbjct: 208 PRSQESKCN 216
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 PKSSGSTCN 10
P+S S CN
Sbjct: 208 PRSQESKCN 216
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 PKSSGSTCN 10
P+S S CN
Sbjct: 208 PRSQESKCN 216
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 PKSSGSTCN 10
P+S S CN
Sbjct: 208 PRSQESKCN 216
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 PKSSGSTCN 10
P+S S CN
Sbjct: 208 PRSQESKCN 216
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 NPKSSGSTC 9
N KS G TC
Sbjct: 684 NMKSEGVTC 692
172|SequenceR|865|856|SISPSNPKSS
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 ISPSNPK 8
I+PSNP+
Sbjct: 548 IAPSNPR 554
>sp|NEC2_HHV2H|NUCLEAR egress protein 2|Human herpesvirus 2 (strain HG52)
Query: 3 SPSNPKS 9
SPSNP S
Sbjct: 42 SPSNPPS 48
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 SISPSNP 7
SI+PS+P
Sbjct: 453 SITPSSP 459
>sp|GLYC_HRSV3|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 ISPSNP 7
ISPSNP
Sbjct: 99 ISPSNP 104
>sp|GLYC_HRSV2|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 ISPSNP 7
ISPSNP
Sbjct: 99 ISPSNP 104
>sp|GLYC_HRSVA|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 ISPSNP 7
ISPSNP
Sbjct: 99 ISPSNP 104
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 3 SPSNPK 8
+PSNP+
Sbjct: 1193 TPSNPR 1198
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 1 SISPSNP 7
SI+P NP
Sbjct: 493 SITPCNP 499
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ISPSNPKSS 10
I P NP S+
Sbjct: 637 IGPENPYST 645
173|SequenceR|870|861|SLISPSISPS
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 2 LISPSISPS 10
++ PS SPS
Sbjct: 337 VVYPSFSPS 345
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 1 SLISPSISPS 10
S I+PS++PS
Sbjct: 496 STIAPSVTPS 505
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 SLISPSISPS 10
S I+PS++PS
Sbjct: 486 STIAPSVTPS 495
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 SLISPSISPS 10
S I+PS++PS
Sbjct: 491 STIAPSVTPS 500
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 3 ISPSISP 9
ISP +SP
Sbjct: 90 ISPYVSP 96
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 3 ISPSISP 9
ISP +SP
Sbjct: 91 ISPYVSP 97
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SLISPSISPS 10
SLI P I PS
Sbjct: 571 SLIWPGIEPS 580
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 3 ISPSISP 9
+SPSISP
Sbjct: 420 VSPSISP 426
>sp|FUS_MUMPM|FUSION glycoprotein F0|Mumps virus genotype B (strain
Query: 2 LISPSISP 9
LI+P++SP
Sbjct: 211 LINPALSP 218
>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain
Query: 2 LISPSISP 9
LI+P++SP
Sbjct: 211 LINPALSP 218
>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)
Query: 2 LISPSISP 9
LI+P++SP
Sbjct: 211 LINPALSP 218
>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)
Query: 2 LISPSISP 9
LI+P++SP
Sbjct: 211 LINPALSP 218
>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)
Query: 2 LISPSISP 9
LI+P++SP
Sbjct: 211 LINPALSP 218
>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)
Query: 2 LISPSISP 9
LI+P++SP
Sbjct: 211 LINPALSP 218
>sp|VE2_HPV23|REGULATORY protein E2|Human papillomavirus 23
Query: 1 SLISPSISPS 10
SL SP SPS
Sbjct: 220 SLSSPQRSPS 229
174|SequenceR|875|866|KHETNSLISP
>sp|VCYCL_HHV8P|VIRAL cyclin homolog|Human herpesvirus 8 type P
Query: 2 HETNSLIS 9
HE N+LI+
Sbjct: 174 HEVNTLIT 181
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 3 ETNSLIS 9
ETN+LIS
Sbjct: 244 ETNTLIS 250
>sp|NSP5_ROTJ1|NON-STRUCTURAL protein 5|Rotavirus X (strain
Query: 3 ETNSLIS 9
ET+SLIS
Sbjct: 38 ETDSLIS 44
>sp|NSP5_ROTB2|NON-STRUCTURAL protein 5|Rotavirus X (isolate
Query: 3 ETNSLIS 9
ET+SLIS
Sbjct: 38 ETDSLIS 44
175|SequenceR|880|871|VEPGRKHETN
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 PGRKHETN 10
PGR HET+
Sbjct: 1593 PGRAHETH 1600
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 PGRKHETN 10
PGR HE +
Sbjct: 1593 PGRAHEVH 1600
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 PGRKHETN 10
PGR HE +
Sbjct: 1593 PGRAHEVH 1600
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 PGRKHETN 10
PGR HE +
Sbjct: 1593 PGRAHEVH 1600
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 PGRKHETN 10
PGR HE +
Sbjct: 1593 PGRAHEVH 1600
>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain
Query: 3 PGRKHETN 10
P R+ ETN
Sbjct: 5 PSRRSETN 12
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 EPGRKHETN 10
EP R H+T+
Sbjct: 461 EPSRGHDTS 469
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 PGRKHETN 10
PGR ET+
Sbjct: 1595 PGRPQETH 1602
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 PGRKHETN 10
PGR ET+
Sbjct: 1595 PGRPQETH 1602
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GRKHET 9
GRKHE+
Sbjct: 450 GRKHES 455
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GRKHET 9
GRKHE+
Sbjct: 450 GRKHES 455
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 GRKHET 9
GRKHE+
Sbjct: 450 GRKHES 455
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 PGRKHETN 10
PG+ HE +
Sbjct: 1593 PGKAHEVH 1600
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 PGRKHETN 10
PG+ HE +
Sbjct: 1593 PGKAHEVH 1600
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 PGRKHE 8
PGR HE
Sbjct: 77 PGRVHE 82
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 PGRKHE 8
PGR HE
Sbjct: 77 PGRVHE 82
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 3 PGRKH 7
PG+KH
Sbjct: 209 PGKKH 213
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 3 PGRKH 7
PG+KH
Sbjct: 209 PGKKH 213
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 3 PGRKH 7
PG+KH
Sbjct: 209 PGKKH 213
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 3 PGRKH 7
PG+KH
Sbjct: 209 PGKKH 213
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 VEPGRKHETN 10
++ +KHETN
Sbjct: 1088 LKEAQKHETN 1097
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 VEPGRKH 7
V PG KH
Sbjct: 2114 VTPGTKH 2120
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 3 PGRKH 7
PGR+H
Sbjct: 531 PGRRH 535
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 3 PGRKHE 8
PGR HE
Sbjct: 77 PGRVHE 82
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 3 PGRKHE 8
PGR HE
Sbjct: 77 PGRVHE 82
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 VEPGRKH 7
V PG KH
Sbjct: 2122 VTPGTKH 2128
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 VEPGRKH 7
V PG KH
Sbjct: 2159 VTPGTKH 2165
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 VEPGRKH 7
V PG KH
Sbjct: 2198 VTPGTKH 2204
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 VEPGRKH 7
V PG KH
Sbjct: 2165 VTPGTKH 2171
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 VEPGRKH 7
V PG KH
Sbjct: 2198 VTPGTKH 2204
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 VEPGRKH 7
V PG KH
Sbjct: 2155 VTPGTKH 2161
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 VEPGRKH 7
V PG KH
Sbjct: 2199 VTPGTKH 2205
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 VEPGRKH 7
V PG KH
Sbjct: 2182 VTPGTKH 2188
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 VEPGRKH 7
V PG KH
Sbjct: 2162 VTPGTKH 2168
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 VEPGRKH 7
V PG KH
Sbjct: 2159 VTPGTKH 2165
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 VEPGRKH 7
V PG KH
Sbjct: 2159 VTPGTKH 2165
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 VEPGRKH 7
V PG KH
Sbjct: 2198 VTPGTKH 2204
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 VEPGRKH 7
V PG KH
Sbjct: 2181 VTPGTKH 2187
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 VEPGRKH 7
V PG KH
Sbjct: 2096 VTPGTKH 2102
176|SequenceR|885|876|VGQSTVEPGR
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 4 STVEPGR 10
STV PGR
Sbjct: 95 STVAPGR 101
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 GQSTVEPG 9
GQ+ EPG
Sbjct: 362 GQNVKEPG 369
>sp|TRX2_VZVD|TRIPLEX capsid protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GQSTVEPG 9
G STV PG
Sbjct: 301 GPSTVHPG 308
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 VGQSTVEPG 9
+G+ EPG
Sbjct: 946 IGEGPCEPG 954
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 VGQSTVEPG 9
+G+ EPG
Sbjct: 953 IGEGPCEPG 961
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 VGQSTVEPG 9
+G+ EPG
Sbjct: 949 IGEGPCEPG 957
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 VGQSTVEPG 9
+G+ EPG
Sbjct: 953 IGEGPCEPG 961
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 VGQSTVE 7
+GQ TVE
Sbjct: 351 IGQKTVE 357
177|SequenceR|890|881|PSSTQVGQST
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 STQVGQST 10
STQ+ QST
Sbjct: 648 STQISQST 655
178|SequenceR|895|886|EQKCAPSSTQ
>sp|ORF2_TTVB1|UNCHARACTERIZED ORF2 protein|Torque teno mini virus 1
Query: 1 EQKCAPSSTQ 10
EQ C PS+T+
Sbjct: 49 EQLCLPSTTE 58
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 4 CAPSSTQ 10
C+P+ST+
Sbjct: 212 CSPASTE 218
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 4 CAPSSTQ 10
C+P+ST+
Sbjct: 212 CSPASTE 218
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 4 CAPSST 9
CAPSST
Sbjct: 444 CAPSST 449
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 2 QKCAPSSTQ 10
Q+C PS T+
Sbjct: 64 QECVPSITE 72
>sp|ORF9C_SARS2|PUTATIVE ORF9c protein|Severe acute respiratory syndrome coronavirus
Query: 1 EQKCAPSSTQ 10
EQ C +STQ
Sbjct: 11 EQHCQKASTQ 20
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 4 CAPSSTQ 10
CAP S Q
Sbjct: 163 CAPKSVQ 169
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 EQKCAPS 7
Q CAPS
Sbjct: 223 NQTCAPS 229
>sp|Y14_SARS|UNCHARACTERIZED protein 14|Severe acute respiratory syndrome coronavirus
Query: 1 EQKCAPSSTQ 10
EQ C +STQ
Sbjct: 11 EQHCQKASTQ 20
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 EQKCAPS 7
Q CAPS
Sbjct: 223 NQTCAPS 229
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 EQKCAPS 7
Q CAPS
Sbjct: 223 NQTCAPS 229
179|SequenceR|900|891|EKDDKEQKCA
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 EKDDKEQKCA 10
E DKEQ CA
Sbjct: 792 EIKDKEQYCA 801
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 EKDDKEQKCA 10
E DKEQ CA
Sbjct: 792 EIKDKEQYCA 801
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 KDDKEQKC 9
K KEQKC
Sbjct: 6108 KIGKEQKC 6115
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 KDDKEQKC 9
+DDK ++C
Sbjct: 997 RDDKLKRC 1004
>sp|NCAP_HENDH|NUCLEOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 KDDKEQKCA 10
KDD+E K A
Sbjct: 513 KDDQEPKPA 521
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 4 DKEQKCA 10
DKE CA
Sbjct: 246 DKESACA 252
180|SequenceR|905|896|ADKKEEKDDK
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 KEEKDDK 10
KEE+DD+
Sbjct: 2261 KEEEDDR 2267
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 KKEEKDD 9
K EE+DD
Sbjct: 1432 KDEERDD 1438
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 KKEEKDD 9
K EE+DD
Sbjct: 1432 KDEERDD 1438
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 KKEEKDD 9
K EE+DD
Sbjct: 1431 KDEERDD 1437
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 2 DKKEEKDD 9
DKK+++DD
Sbjct: 65 DKKQDQDD 72
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DKKEEK 7
DKKE+K
Sbjct: 163 DKKEQK 168
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 2 DKKEEKDDK 10
D+ +EKDD+
Sbjct: 18 DRMQEKDDE 26
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DKKEEK 7
DKKE+K
Sbjct: 156 DKKEKK 161
181|SequenceR|910|901|RVQEAADKKE
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QEAADK 8
QEAADK
Sbjct: 117 QEAADK 122
182|SequenceR|915|906|NLTSKRVQEA
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 1 NLTSKRVQEA 10
NL++K +Q+A
Sbjct: 256 NLSAKNLQQA 265
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 1 NLTSKRVQEA 10
NL++K +Q+A
Sbjct: 251 NLSAKNLQQA 260
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 3 TSKRVQEA 10
TSK+VQ A
Sbjct: 1078 TSKKVQMA 1085
>sp|VPAP_HHV6Z|DNA polymerase processivity factor|Human herpesvirus 6B (strain Z29)
Query: 1 NLTSKRVQEA 10
NL++K +Q+A
Sbjct: 231 NLSAKNLQQA 240
183|SequenceR|920|911|EKANPNLTSK
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 EKANPNLTS 9
EKANP+L++
Sbjct: 283 EKANPSLST 291
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 NPNLTSK 10
NPN+T K
Sbjct: 3309 NPNMTDK 3315
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 NPNLTSK 10
NPN+T K
Sbjct: 3309 NPNMTDK 3315
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 NPNLTSK 10
NPN+T K
Sbjct: 3309 NPNMTDK 3315
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 NPNLTSK 10
NPN+T K
Sbjct: 3309 NPNMTDK 3315
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 EKANPNLTS 9
E+ANP+L++
Sbjct: 283 EEANPSLST 291
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 EKANPNLTS 9
EK NP+L++
Sbjct: 283 EKTNPSLST 291
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 EKANPNLTS 9
E+ANP+L++
Sbjct: 283 EEANPSLST 291
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 EKANPNLTS 9
EK NP+L++
Sbjct: 283 EKTNPSLST 291
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 1 EKANPNLTS 9
+KANP+L++
Sbjct: 283 KKANPSLST 291
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 EKANPNLT 8
E NPNLT
Sbjct: 1821 ETNNPNLT 1828
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 EKANPNL 7
EK+ PNL
Sbjct: 1662 EKSRPNL 1668
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 EKANPNL 7
EK+ PNL
Sbjct: 1662 EKSRPNL 1668
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 EKANPNL 7
EK+ PNL
Sbjct: 1662 EKSRPNL 1668
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 EKANPNL 7
EK+ PNL
Sbjct: 1662 EKSRPNL 1668
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 EKANPNL 7
EK+ PNL
Sbjct: 1662 EKSRPNL 1668
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 EKANPNL 7
EK+ PNL
Sbjct: 1662 EKSRPNL 1668
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 EKANPNL 7
EK+ PNL
Sbjct: 1662 EKSRPNL 1668
Query: 4 NPNLTSK 10
NP LTS+
Sbjct: 1419 NPELTSE 1425
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 KANPN 6
KANPN
Sbjct: 839 KANPN 843
184|SequenceR|925|916|SRPNFEKANP
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 4 NFEKANP 10
NF+K NP
Sbjct: 257 NFQKVNP 263
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PNFEKANP 10
PN+E+ NP
Sbjct: 292 PNYEQQNP 299
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 3 PNFEKANP 10
PN+E+ NP
Sbjct: 292 PNYEQQNP 299
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 3 PNFEKANP 10
PN+E+ NP
Sbjct: 195 PNYEQYNP 202
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 3 PNFEKANP 10
PN E+ NP
Sbjct: 340 PNNERGNP 347
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 3 PNFEKANP 10
PN E+ NP
Sbjct: 340 PNNERGNP 347
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 3 PNFEKANP 10
PN E+ NP
Sbjct: 340 PNNERGNP 347
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 3 PNFEKANP 10
PN E+ NP
Sbjct: 340 PNNERGNP 347
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 3 PNFEKANP 10
PN E+ NP
Sbjct: 340 PNNERGNP 347
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 3 PNFEKANP 10
PN E+ NP
Sbjct: 340 PNNERGNP 347
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SRPNFEKAN 9
S+P F KAN
Sbjct: 420 SQPGFGKAN 428
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 3 PNFEKANP 10
PN E+ NP
Sbjct: 340 PNNERGNP 347
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 PNFEKA 8
PNF KA
Sbjct: 340 PNFSKA 345
>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)
Query: 3 PNFEKA 8
PNF KA
Sbjct: 340 PNFSKA 345
>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)
Query: 2 RPNFEKA 8
RP+ EKA
Sbjct: 219 RPHLEKA 225
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 3 PNFEKA 8
PNF KA
Sbjct: 340 PNFSKA 345
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 3 PNFEKA 8
PNF KA
Sbjct: 340 PNFSKA 345
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PNFEKA 8
PNF KA
Sbjct: 340 PNFSKA 345
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PNFEKA 8
PNF KA
Sbjct: 340 PNFSKA 345
>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann
Query: 2 RPNFEKA 8
RP+ EKA
Sbjct: 219 RPHLEKA 225
>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 RPNFEKA 8
RP+ EKA
Sbjct: 219 RPHLEKA 225
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 RPNFEKA 8
RP+ EKA
Sbjct: 219 RPHLEKA 225
>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)
Query: 2 RPNFEKA 8
RP+ EKA
Sbjct: 219 RPHLEKA 225
185|SequenceR|930|921|KPQSFSRPNF
>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)
Query: 2 PQSFSRPNF 10
P SFS PNF
Sbjct: 194 PMSFSFPNF 202
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 1 KPQSFSRPNF 10
+PQ +S PN+
Sbjct: 398 EPQQWSLPNY 407
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 KPQSFSRPNF 10
+PQ SRP F
Sbjct: 116 RPQGGSRPEF 125
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 KPQSFSRPNF 10
+PQ SRP F
Sbjct: 116 RPQGGSRPEF 125
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 KPQSFSRPNF 10
+PQ SRP F
Sbjct: 116 RPQGGSRPEF 125
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PQSFSRPN 9
PQ S PN
Sbjct: 77 PQEMSLPN 84
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PQSFSRPN 9
PQ F RP+
Sbjct: 250 PQPFMRPH 257
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PQSFSRPN 9
PQ F RP+
Sbjct: 260 PQPFMRPH 267
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PQSFSRPN 9
PQ F RP+
Sbjct: 260 PQPFMRPH 267
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 1 KPQSFSRPN 9
+PQ +RP+
Sbjct: 207 RPQPLARPH 215
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 4 SFSRPNF 10
SFS P F
Sbjct: 701 SFSEPTF 707
>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 QSFSRPNF 10
++FS+PN
Sbjct: 201 ETFSKPNL 208
>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 QSFSRPNF 10
++FS+PN
Sbjct: 201 ETFSKPNL 208
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 PQSFSRPNF 10
P SF+ P F
Sbjct: 951 PVSFTGPTF 959
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 QSFSRPNF 10
++FS+PN
Sbjct: 201 ETFSKPNL 208
>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 QSFSRPNF 10
++FS+PN
Sbjct: 201 ETFSKPNL 208
>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 QSFSRPNF 10
++FS+PN
Sbjct: 201 ETFSKPNL 208
186|SequenceR|935|926|PTTSPKPQSF
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 PTTSPKPQSF 10
P TSP P+ F
Sbjct: 26 PATSPMPKGF 35
>sp|VP7_ROTHV|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 PTTSPKPQ 8
PTTSP+ +
Sbjct: 275 PTTSPQTE 282
>sp|VP7_ROTHT|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 PTTSPKPQ 8
PTTSP+ +
Sbjct: 275 PTTSPQTE 282
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TTSPKPQS 9
TT P PQS
Sbjct: 1795 TTDPFPQS 1802
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TTSPKPQS 9
TT P PQS
Sbjct: 1795 TTDPFPQS 1802
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 PTTSPKPQS 9
P TSP P++
Sbjct: 784 PATSPPPRT 792
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 TTSPKPQS 9
TT+P P++
Sbjct: 120 TTTPNPRT 127
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 PTTSPKPQS 9
P T P P S
Sbjct: 23 PYTGPPPMS 31
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 1 PTTSPKPQS 9
P T P P S
Sbjct: 23 PYTGPPPMS 31
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 PTTSPKPQS 9
P T P P S
Sbjct: 23 PYTGPPPMS 31
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|VP24_EBOSU|MEMBRANE-ASSOCIATED protein VP24|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 PTTSPKPQSF 10
P +PKP S
Sbjct: 229 PVATPKPSSI 238
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PTTSPKPQS 9
P TSP P +
Sbjct: 25 PPTSPAPST 33
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 TTSPKPQ 8
+T+PKPQ
Sbjct: 2 STNPKPQ 8
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 PTTSPKPQS 9
P TSP P +
Sbjct: 25 PPTSPAPST 33
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PKPQSF 10
P PQ F
Sbjct: 747 PSPQGF 752
187|SequenceR|940|931|PRPSTPTTSP
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 1 PRPSTPTTSP 10
P+P TP+ P
Sbjct: 17 PKPGTPSAPP 26
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 PRPSTPTTS 9
P+P TP S
Sbjct: 1226 PKPETPQIS 1234
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PRPSTPTT 8
PRP TP T
Sbjct: 23 PRPETPVT 30
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PRPSTPTT 8
PRP TP T
Sbjct: 23 PRPETPVT 30
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 RPSTPT 7
RPS PT
Sbjct: 31 RPSPPT 36
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 RPSTPT 7
RPS PT
Sbjct: 31 RPSPPT 36
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 RPSTPT 7
RPS PT
Sbjct: 31 RPSPPT 36
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 RPSTPT 7
RPS PT
Sbjct: 31 RPSPPT 36
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 2 RPSTPT 7
RPS PT
Sbjct: 31 RPSPPT 36
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 2 RPSTPT 7
RPS PT
Sbjct: 31 RPSPPT 36
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 RPSTPT 7
RPS PT
Sbjct: 31 RPSPPT 36
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 RPSTPT 7
RPS PT
Sbjct: 31 RPSPPT 36
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRPSTPTTS 9
PRP TP S
Sbjct: 444 PRPGTPGDS 452
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PRPSTPTT 8
PRP TP T
Sbjct: 23 PRPETPVT 30
>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 RPSTPTT 8
RPS P T
Sbjct: 151 RPSAPDT 157
>sp|VP7_ROTHV|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 STPTTSP 10
+ PTTSP
Sbjct: 273 ADPTTSP 279
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 1 PRPSTPTTS 9
PRP +PT +
Sbjct: 622 PRPPSPTPA 630
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 1 PRPSTPTT 8
PRP TP T
Sbjct: 23 PRPETPVT 30
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 1 PRPSTPTT 8
PRP TP T
Sbjct: 23 PRPETPVT 30
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 1 PRPSTPTT 8
PRP TP T
Sbjct: 23 PRPETPVT 30
>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 STPTTSP 10
S PTT+P
Sbjct: 273 SDPTTTP 279
>sp|VP7_ROTHT|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 4 STPTTSP 10
+ PTTSP
Sbjct: 273 ADPTTSP 279
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PRPSTPTTS 9
PR S+ TTS
Sbjct: 125 PRTSSSTTS 133
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 RPSTPTTS 9
RPSTP+ S
Sbjct: 1783 RPSTPSAS 1790
>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 4 STPTTSP 10
S PTT+P
Sbjct: 273 SDPTTTP 279
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 2 RPSTPTTS 9
RP TPT +
Sbjct: 724 RPPTPTVA 731
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 RPSTPTTS 9
RP+T TT+
Sbjct: 1156 RPATGTTA 1163
>sp|CEP3_HCMVM|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PRPSTPTT 8
PRP TP T
Sbjct: 159 PRPDTPRT 166
>sp|CEP3_HCMVA|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PRPSTPTT 8
PRP TP T
Sbjct: 159 PRPDTPRT 166
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 1 PRPSTP 6
PR STP
Sbjct: 539 PRSSTP 544
188|SequenceR|945|936|SPQAQPRPST
>sp|US9_VZVO|ENVELOPE protein US9|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SPQAQPRPST 10
+P+AQP +T
Sbjct: 21 TPRAQPNNTT 30
>sp|US9_VZVD|ENVELOPE protein US9|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SPQAQPRPST 10
+P+AQP +T
Sbjct: 21 TPRAQPNNTT 30
>sp|PG052_MONPV|PROTEIN OPG053|Monkeypox virus (MPXV)
Query: 3 QAQPRPST 10
Q QPRP T
Sbjct: 16 QEQPRPRT 23
>sp|PG052_VACCP|PROTEIN OPG052|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 QAQPRPST 10
Q QPRP T
Sbjct: 17 QEQPRPRT 24
>sp|PG052_VACCC|PROTEIN OPG052|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 QAQPRPST 10
Q QPRP T
Sbjct: 17 QEQPRPRT 24
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 4 AQPRPST 10
AQPRP T
Sbjct: 328 AQPRPPT 334
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 4 AQPRPST 10
AQPRP T
Sbjct: 328 AQPRPPT 334
189|SequenceR|950|941|GVMSPSPQAQ
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 GVMSPSP 7
GVM P+P
Sbjct: 811 GVMHPTP 817
>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VMSPSPQ 8
VMSPSP+
Sbjct: 259 VMSPSPE 265
>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VMSPSPQ 8
VMSPSP+
Sbjct: 259 VMSPSPE 265
>sp|HBSAG_HBVA6|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 1 GVMSPSPQAQ 10
GV+ SPQAQ
Sbjct: 62 GVLGWSPQAQ 71
>sp|HBSAG_HBVA4|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 1 GVMSPSPQAQ 10
GV+ SPQAQ
Sbjct: 73 GVLGWSPQAQ 82
>sp|HBSAG_HBVA5|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 1 GVMSPSPQAQ 10
GV+ SPQAQ
Sbjct: 73 GVLGWSPQAQ 82
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 MSPSPQAQ 10
M+PSP+ Q
Sbjct: 417 MAPSPETQ 424
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 3 MSPSPQAQ 10
M+PSP+ Q
Sbjct: 417 MAPSPETQ 424
>sp|HBSAG_HBVA9|LARGE envelope protein|Hepatitis B virus genotype A3
Query: 1 GVMSPSPQAQ 10
GV+ SPQAQ
Sbjct: 73 GVLGWSPQAQ 82
>sp|HBSAG_HBVA8|LARGE envelope protein|Hepatitis B virus genotype A3
Query: 1 GVMSPSPQAQ 10
GV+ SPQAQ
Sbjct: 73 GVLGWSPQAQ 82
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GVMSPSPQ 8
G ++PSPQ
Sbjct: 2917 GALAPSPQ 2924
>sp|NCAP_CVHOC|NUCLEOPROTEIN coronavirus OC43 (HCoV-OC43)
Query: 3 MSPSPQAQ 10
MSP PQ Q
Sbjct: 389 MSPKPQRQ 396
>sp|HBSAG_HBVA7|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 1 GVMSPSPQAQ 10
G++ SPQAQ
Sbjct: 73 GILGWSPQAQ 82
>sp|HBSAG_HBVA3|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 1 GVMSPSPQAQ 10
G++ SPQAQ
Sbjct: 73 GILGWSPQAQ 82
>sp|HBSAG_HBVA2|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 1 GVMSPSPQAQ 10
G++ SPQAQ
Sbjct: 62 GILGWSPQAQ 71
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 SPSPQAQ 10
+PSP+AQ
Sbjct: 418 APSPEAQ 424
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 4 SPSPQAQ 10
SP PQAQ
Sbjct: 249 SPDPQAQ 255
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GVMSPSPQAQ 10
GV+SP Q +
Sbjct: 137 GVLSPDQQKK 146
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GVMSPSPQAQ 10
GV+SP Q +
Sbjct: 137 GVLSPDQQKK 146
>sp|X_HBVE4|PROTEIN X|Hepatitis B virus genotype E
Query: 1 GVMSPSPQA 9
G+ SPSP A
Sbjct: 36 GLSSPSPSA 44
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 1 GVMSPSPQAQ 10
G +SP PQ +
Sbjct: 385 GSLSPKPQRK 394
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 1 GVMSPSPQAQ 10
G +SP PQ +
Sbjct: 385 GSLSPKPQRK 394
190|SequenceR|955|946|TPQQHGVMSP
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 TPQQHGVM 8
TPQ HG +
Sbjct: 89 TPQGHGTL 96
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 1 TPQQHG 6
+P+QHG
Sbjct: 116 SPEQHG 121
191|SequenceR|960|951|QTYVPTPQQH
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QTYVPTPQQ 9
QT++P+P++
Sbjct: 708 QTHIPSPRE 716
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QTYVPTPQ 8
QT++PTP+
Sbjct: 709 QTHLPTPR 716
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QTYVPTPQ 8
QT++PTP+
Sbjct: 718 QTHLPTPR 725
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QTYVPTPQ 8
QT++PTP+
Sbjct: 723 QTHLPTPR 730
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QTYVPTPQ 8
QT++PTP+
Sbjct: 718 QTHLPTPR 725
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QTYVPTP 7
QT++PTP
Sbjct: 718 QTHLPTP 724
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 QTYVPTPQQ 9
Q ++PTP++
Sbjct: 79 QDWIPTPEE 87
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QTYVPTPQ 8
QT++P P+
Sbjct: 713 QTHLPNPR 720
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QTYVPTPQ 8
QT++P P+
Sbjct: 727 QTHLPAPR 734
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QTYVPTPQ 8
QT++P P+
Sbjct: 718 QTHLPIPR 725
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QTYVPTPQ 8
QT++P P+
Sbjct: 718 QTHLPIPR 725
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 TYVPTPQQH 10
+Y PTP+ H
Sbjct: 358 SYEPTPRIH 366
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 YVPTPQQH 10
YVP P+Q
Sbjct: 244 YVPQPKQR 251
>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 QTYVPTPQQ 9
Q ++PTP++
Sbjct: 79 QDWIPTPEE 87
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 1 QTYVPTPQ 8
+TY P PQ
Sbjct: 78 KTYQPEPQ 85
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 1 QTYVPTPQ 8
+TY P PQ
Sbjct: 177 KTYQPEPQ 184
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 QTYVPTPQ 8
TY PTP
Sbjct: 290 STYFPTPS 297
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 TYVPTPQQH 10
TY PTP Q
Sbjct: 1133 TYGPTPPQR 1141
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 3 YVPTPQQ 9
+VPTP+
Sbjct: 417 FVPTPEN 423
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 1 QTYVPTPQ 8
+TY P PQ
Sbjct: 184 KTYQPEPQ 191
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 YVPTPQQH 10
Y PTP+ H
Sbjct: 359 YEPTPRIH 366
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 1 QTYVPTPQ 8
+TY+ TP+
Sbjct: 319 ETYLDTPR 326
192|SequenceR|965|956|AFCVPQTYVP
>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)
Query: 3 CVPQTY 8
C+P+TY
Sbjct: 153 CIPKTY 158
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen
Query: 3 CVPQTY 8
C+P+TY
Sbjct: 153 CIPKTY 158
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 3 CVPQTY 8
C+P+TY
Sbjct: 155 CIPKTY 160
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 2 FCVPQTYV 9
F VP++Y+
Sbjct: 374 FVVPESYI 381
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 2 FCVPQT 7
+C+P+T
Sbjct: 541 YCIPET 546
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 2 FCVPQT 7
+C+P+T
Sbjct: 541 YCIPET 546
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 2 FCVPQT 7
+C+P+T
Sbjct: 541 YCIPET 546
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 VPQTYVP 10
VP+ Y P
Sbjct: 1679 VPEAYTP 1685
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 VPQTYVP 10
VP+ Y P
Sbjct: 1679 VPEAYTP 1685
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 VPQTYVP 10
VP+ Y P
Sbjct: 1679 VPEAYTP 1685
>sp|US03_HCMVT|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 AFCVPQ 6
A CVPQ
Sbjct: 127 AACVPQ 132
>sp|US03_HCMVM|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AFCVPQ 6
A CVPQ
Sbjct: 127 AACVPQ 132
>sp|US03_HCMVA|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AFCVPQ 6
A CVPQ
Sbjct: 127 AACVPQ 132
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 2 FCVPQT 7
FC PQT
Sbjct: 255 FCSPQT 260
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 3 CVPQTYV 9
CVPQ ++
Sbjct: 31 CVPQAFL 37
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 1 AFCVPQT 7
A+C P+T
Sbjct: 772 AYCTPET 778
193|SequenceR|970|961|YMMNPAFCVP
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 YMMNPAFCV 9
Y+ NP FCV
Sbjct: 17 YITNPTFCV 25
>sp|NCAP_RVFVZ|NUCLEOPROTEIN valley fever virus (strain
Query: 1 YMMNPAF 7
+MM+P+F
Sbjct: 143 HMMHPSF 149
>sp|NCAP_RVFV|NUCLEOPROTEIN valley fever virus (RVFV)
Query: 1 YMMNPAF 7
+MM+P+F
Sbjct: 143 HMMHPSF 149
>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)
Query: 1 YMMNPAFCVP 10
++MN C P
Sbjct: 291 FLMNAYLCFP 300
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 MMNPAFC 8
+M+P FC
Sbjct: 410 LMHPDFC 416
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 4 NPAFC-VP 10
+PAFC VP
Sbjct: 166 HPAFCDVP 173
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 MMNPAFC 8
+M+P FC
Sbjct: 436 LMHPDFC 442
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 2 MMNPAFC 8
+M+P FC
Sbjct: 406 LMHPDFC 412
194|SequenceR|975|966|SVPVPYMMNP
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 3 PVPYMMN 9
P PYM+N
Sbjct: 309 PAPYMVN 315
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 3 PVPYMMN 9
P+PYM++
Sbjct: 238 PIPYMIS 244
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PVPYMMN 9
P+PYM++
Sbjct: 238 PIPYMIS 244
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PVPYMMN 9
P+PYM++
Sbjct: 238 PIPYMIS 244
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 5 PYMMNP 10
PY +NP
Sbjct: 576 PYCLNP 581
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 PVPYMMNP 10
PVP NP
Sbjct: 1677 PVPEAYNP 1684
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 VPVPYMMNP 10
VP Y+ NP
Sbjct: 371 VPASYINNP 379
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 VPVPYMMNP 10
VP Y+ NP
Sbjct: 371 VPASYINNP 379
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 5 PYMMNP 10
PY +NP
Sbjct: 581 PYCLNP 586
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 5 PYMMNP 10
PY +NP
Sbjct: 581 PYCLNP 586
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 5 PYMMNP 10
PY +NP
Sbjct: 581 PYCLNP 586
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 5 PYMMNP 10
PY +NP
Sbjct: 581 PYCLNP 586
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 SVPVPYMMN 9
S+P PY M+
Sbjct: 37 SLPQPYDMD 45
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 PVPYMMN 9
P+PYM++
Sbjct: 238 PMPYMIS 244
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 PVPYMMN 9
P+PYM++
Sbjct: 238 PMPYMIS 244
>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 4 VPYMMNP 10
VP++ NP
Sbjct: 181 VPFIRNP 187
>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 VPYMMNP 10
VP++ NP
Sbjct: 181 VPFIRNP 187
195|SequenceR|980|971|PQVGPSVPVP
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 1 PQVGPSVP 8
PQVGP P
Sbjct: 337 PQVGPRQP 344
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 VGPSVPVP 10
GPSVPVP
Sbjct: 2065 TGPSVPVP 2072
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 PQVGPSVPV 9
P V PS+PV
Sbjct: 266 PGVAPSIPV 274
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 PQVGPSVPV 9
P V PS+PV
Sbjct: 266 PGVAPSIPV 274
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 PQVGPSVPV 9
P V PS+PV
Sbjct: 266 PGVAPSIPV 274
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 1 PQVGPS 6
PQVGPS
Sbjct: 183 PQVGPS 188
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 VGPSVPVP 10
GPSVP+P
Sbjct: 2068 TGPSVPIP 2075
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 VGPSVPVP 10
GPSVP+P
Sbjct: 2069 TGPSVPIP 2076
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 PQVGPSVPVP 10
PQ+ +VP P
Sbjct: 1981 PQINSAVPSP 1990
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 VGPSVPVP 10
GPS+P+P
Sbjct: 2071 TGPSIPIP 2078
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 PQVGPSV-PV 9
P++GP V PV
Sbjct: 422 PEIGPDVAPV 431
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 1 PQVGPSV-PV 9
P++GP V PV
Sbjct: 422 PEIGPDVAPV 431
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 1 PQVGPSV-PV 9
P++GP V PV
Sbjct: 422 PEIGPDVAPV 431
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 PQVGPSV-PV 9
P++GP V PV
Sbjct: 422 PEIGPDVAPV 431
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 PQVGPSV 7
P++GP V
Sbjct: 422 PEIGPDV 428
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 PQVGPSVPVP 10
PQV +VP P
Sbjct: 2050 PQVRSAVPSP 2059
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 PSVPVP 10
P++P+P
Sbjct: 485 PNIPIP 490
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 VGPSVPVP 10
GPS PVP
Sbjct: 2075 TGPSTPVP 2082
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 PSVPVP 10
P++P+P
Sbjct: 485 PNIPIP 490
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 VGPSVPVP 10
GPSVP P
Sbjct: 2068 TGPSVPAP 2075
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 VGPSVPVP 10
GPSVP P
Sbjct: 2068 TGPSVPAP 2075
>sp|M1_DHVI1|MATRIX protein 1|Dhori virus (strain Indian/1313/61) (Dho)
Query: 1 PQVGPSV 7
P++GP V
Sbjct: 17 PRIGPHV 23
>sp|UL66_HCMVA|UNCHARACTERIZED protein UL66|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PQVGPSVP 8
P GPSVP
Sbjct: 16 PFSGPSVP 23
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 PQVGPSVPVP 10
PQ+ +VP P
Sbjct: 2007 PQIRSAVPSP 2016
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 PQVGPSVPVP 10
PQ+ +VP P
Sbjct: 2037 PQIRSAVPSP 2046
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 PQVGPSVPVP 10
PQ+ +VP P
Sbjct: 2037 PQIRSAVPSP 2046
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 PQVGPSVPVP 10
PQV +VP P
Sbjct: 719 PQVRSAVPSP 728
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 QVGPSVPVP 10
++GP+ PVP
Sbjct: 1156 RLGPAQPVP 1164
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 VGPSVPVP 10
GP VP+P
Sbjct: 2067 TGPGVPIP 2074
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 QVGPSVPV 9
QVGP V V
Sbjct: 372 QVGPDVDV 379
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 QVGPSVPV 9
QVGP V V
Sbjct: 372 QVGPDVDV 379
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 5 PSVPVP 10
PSVPVP
Sbjct: 2074 PSVPVP 2079
196|SequenceR|985|976|PIPYLPQVGP
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 IPYLPQ 7
IPYLP+
Sbjct: 3348 IPYLPK 3353
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 1 PIPYLP 6
P+P+LP
Sbjct: 77 PLPFLP 82
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 1 PIPYLP 6
P+P+LP
Sbjct: 77 PLPFLP 82
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PIPYLP 6
P+P+LP
Sbjct: 77 PLPFLP 82
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 IPYLPQ 7
IPYLP+
Sbjct: 3350 IPYLPK 3355
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 IPYLPQ 7
IPYLP+
Sbjct: 3349 IPYLPK 3354
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 IPYLPQ 7
IPYLP+
Sbjct: 3350 IPYLPK 3355
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 IPYLPQ 7
IPYLP+
Sbjct: 3339 IPYLPK 3344
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PIPYLP 6
P+P+LP
Sbjct: 397 PLPWLP 402
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PIPYLP 6
P+P+LP
Sbjct: 266 PLPWLP 271
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 PIPYLP 6
P+P+LP
Sbjct: 217 PLPWLP 222
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PIPYLP 6
P+P+LP
Sbjct: 497 PLPWLP 502
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 PIPYLP 6
P+P+LP
Sbjct: 217 PLPWLP 222
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PIPYLP 6
P+P+LP
Sbjct: 497 PLPWLP 502
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2676 PYMPSV 2681
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PIPYLP 6
P+P+LP
Sbjct: 497 PLPWLP 502
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2673 PYMPSV 2678
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PIPYLP 6
P+P+LP
Sbjct: 497 PLPWLP 502
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2676 PYMPSV 2681
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PIPYLP 6
P+P+LP
Sbjct: 497 PLPWLP 502
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2676 PYMPSV 2681
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 PIPYLP 6
P+P+LP
Sbjct: 497 PLPWLP 502
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2676 PYMPSV 2681
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PIPYLP 6
P+P+LP
Sbjct: 497 PLPWLP 502
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2676 PYMPSV 2681
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PIPYLP 6
P+P+LP
Sbjct: 497 PLPWLP 502
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2676 PYMPSV 2681
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 IPYLPQ 7
+PYLP+
Sbjct: 3348 VPYLPK 3353
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 IPYLPQ 7
+PYLP+
Sbjct: 3346 VPYLPK 3351
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 IPYLPQ 7
+PYLP+
Sbjct: 3348 VPYLPK 3353
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 IPYLPQ 7
+PYLP+
Sbjct: 3348 VPYLPK 3353
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 IPYLPQ 7
+PYLP+
Sbjct: 3348 VPYLPK 3353
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 PYLPQV 8
PY+P+V
Sbjct: 2694 PYMPEV 2699
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 1 PIPYLPQVGP 10
P P+L + GP
Sbjct: 243 PCPFLKKSGP 252
>sp|PG055_VACCP|PROTEIN OPG055|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 IPYLPQVG 9
+ +LPQ+G
Sbjct: 180 VQFLPQIG 187
>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 IPYLPQVG 9
+ +LPQ+G
Sbjct: 184 VQFLPQIG 191
>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)
Query: 2 IPYLPQVG 9
+ +LPQ+G
Sbjct: 184 VQFLPQIG 191
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PIPYLP 6
P+P+LP
Sbjct: 217 PLPWLP 222
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 5 LPQVGP 10
LP++GP
Sbjct: 421 LPEIGP 426
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 5 LPQVGP 10
LP++GP
Sbjct: 421 LPEIGP 426
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 5 LPQVGP 10
LP++GP
Sbjct: 421 LPEIGP 426
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 5 LPQVGP 10
LP++GP
Sbjct: 421 LPEIGP 426
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 5 LPQVGP 10
LP++GP
Sbjct: 421 LPEIGP 426
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 PYLPQV 8
PY+P+V
Sbjct: 2711 PYMPKV 2716
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 PYLPQV 8
PY+P+V
Sbjct: 2714 PYMPKV 2719
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 PYLPQV 8
PY+P+V
Sbjct: 2713 PYMPKV 2718
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 PYLPQV 8
PY+P+V
Sbjct: 2714 PYMPKV 2719
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 PYLPQV 8
PY+P+V
Sbjct: 2713 PYMPKV 2718
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 PYLPQV 8
PY+P+V
Sbjct: 2713 PYMPKV 2718
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 PYLPQV 8
PY+P+V
Sbjct: 2715 PYMPKV 2720
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 PYLPQV 8
PY+P+V
Sbjct: 2713 PYMPKV 2718
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 IPYLPQV 8
+PY+P V
Sbjct: 245 LPYIPDV 251
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 2 IPYLP 6
+PYLP
Sbjct: 300 VPYLP 304
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 PYLPQV 8
PY+P+V
Sbjct: 2715 PYMPRV 2720
>sp|ORF0_VZVO|MEMBRANE protein 0|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PIPYLP 6
PIPYLP
Sbjct: 29 PIPYLP 34
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 3 PYLPQVG 9
P++P VG
Sbjct: 172 PHIPSVG 178
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 3 PYLPQVG 9
P++P VG
Sbjct: 172 PHIPSVG 178
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2676 PYMPSV 2681
>sp|ORF0_VZVD|MEMBRANE protein 0|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PIPYLP 6
PIPYLP
Sbjct: 29 PIPYLP 34
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2677 PYMPSV 2682
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2677 PYMPSV 2682
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2692 PYMPDV 2697
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2693 PYMPDV 2698
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2692 PYMPDV 2697
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2692 PYMPDV 2697
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2692 PYMPDV 2697
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2692 PYMPDV 2697
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2693 PYMPDV 2698
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 PYLPQV 8
PY+P V
Sbjct: 2693 PYMPDV 2698
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 4 YLPQVGP 10
+LP++GP
Sbjct: 269 FLPRLGP 275
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PIPYLP 6
P+PY+P
Sbjct: 275 PMPYVP 280
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PIPYLP 6
P+PY+P
Sbjct: 275 PMPYVP 280
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PIPYLP 6
P+PY+P
Sbjct: 275 PMPYVP 280
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 PIPYLP 6
P+PY+P
Sbjct: 275 PMPYVP 280
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 PIPYLP 6
P+PY+P
Sbjct: 275 PMPYVP 280
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PIPYLP 6
P+PY+P
Sbjct: 275 PMPYVP 280
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 2 IPYLPQVGP 10
+P LP+ GP
Sbjct: 123 LPELPEAGP 131
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 2 IPYLPQVGP 10
+PY ++GP
Sbjct: 831 LPYFAKIGP 839
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 PIPYLP 6
P+PY+P
Sbjct: 275 PMPYVP 280
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 PIPYLP 6
P+PY+P
Sbjct: 275 PMPYVP 280
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PIPYLPQVG 9
P+P PQ G
Sbjct: 527 PVPQQPQAG 535
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 YLPQVGP 10
YLP GP
Sbjct: 274 YLPTTGP 280
197|SequenceR|990|981|PMPTMPIPYL
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 PTMPIPY 9
PTMP+ Y
Sbjct: 526 PTMPVDY 532
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 PTMPIPY 9
PTMP+ Y
Sbjct: 519 PTMPVDY 525
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 3 PTMPIPY 9
PTMP+ Y
Sbjct: 519 PTMPVDY 525
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 3 PTMPIPY 9
PTMP+ Y
Sbjct: 519 PTMPVDY 525
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 PTMPIPY 9
PTMP+ Y
Sbjct: 518 PTMPVDY 524
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 PTMPIPY 9
PTMP+ Y
Sbjct: 518 PTMPVDY 524
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 PTMPIPY 9
PTMP+ Y
Sbjct: 518 PTMPVDY 524
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 PTMPIPY 9
PTMP+ Y
Sbjct: 529 PTMPVDY 535
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 PTMPIPY 9
PTMP+ Y
Sbjct: 529 PTMPVDY 535
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 3 PTMPIPY 9
PTMP+ Y
Sbjct: 529 PTMPVDY 535
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 PTMPIPY 9
PTMP+ Y
Sbjct: 531 PTMPVDY 537
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 PTMPIPY 9
PTMP+ Y
Sbjct: 529 PTMPVDY 535
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 PTMPIPY 9
PTMP+ Y
Sbjct: 529 PTMPVDY 535
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 PTMPIPY 9
PTMP+ Y
Sbjct: 535 PTMPVDY 541
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PMPTMPIP 8
P PTMP P
Sbjct: 588 PKPTMPHP 595
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PMPTMPIP 8
P PTMP P
Sbjct: 588 PKPTMPHP 595
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 MPTMPIPY 9
+PT P PY
Sbjct: 75 VPTDPTPY 82
>sp|PG034_VACCC|PROTEIN OPG034|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 TMPIPY 9
T+PIPY
Sbjct: 172 TLPIPY 177
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PMPTMPIP 8
PMP +P P
Sbjct: 275 PMPYVPYP 282
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 PMPTMPI 7
P+P +PI
Sbjct: 736 PLPEVPI 742
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 MPTMPIP 8
+PT P+P
Sbjct: 1892 VPTQPLP 1898
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 PMPTMPIP 8
PMP +P P
Sbjct: 275 PMPYVPYP 282
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PMPTMPIP 8
PMP +P P
Sbjct: 275 PMPYVPYP 282
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 MPTMPIP 8
+PT P+P
Sbjct: 1892 VPTQPLP 1898
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PMPTMPIP 8
PMP +P P
Sbjct: 275 PMPYVPYP 282
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PMPTMPIP 8
PMP +P P
Sbjct: 275 PMPYVPYP 282
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 PMPTMPIP 8
PMP +P P
Sbjct: 275 PMPYVPYP 282
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 1 PMPTMP 6
P+PT+P
Sbjct: 600 PVPTIP 605
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 1 PMPTMP 6
P+PT+P
Sbjct: 607 PVPTIP 612
>sp|NS1_I82A8|NON-STRUCTURAL protein 1|Influenza A virus (strain
Query: 1 PMPTMP 6
P+P+MP
Sbjct: 162 PIPSMP 167
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 1 PMPTMP 6
P+PT+P
Sbjct: 600 PVPTIP 605
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 PMPTMP 6
P+PT+P
Sbjct: 607 PVPTIP 612
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 1 PMPTMP 6
P+PT+P
Sbjct: 594 PVPTIP 599
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 PMPTMP 6
P+PT+P
Sbjct: 594 PVPTIP 599
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 PMPTMP 6
P+PT+P
Sbjct: 594 PVPTIP 599
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 1 PMPTMP 6
P+PT+P
Sbjct: 594 PVPTIP 599
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 1 PMPTMP 6
P+PT+P
Sbjct: 594 PVPTIP 599
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 1 PMPTMP 6
P+PT+P
Sbjct: 594 PVPTIP 599
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 PMPTMPIPYL 10
P+P P P L
Sbjct: 398 PLPMTPEPTL 407
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 1 PMPTMP 6
P+PT+P
Sbjct: 594 PVPTIP 599
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 1 PMPTMP 6
P+PT+P
Sbjct: 606 PVPTIP 611
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 PMPTMPIP 8
PMP +P P
Sbjct: 275 PMPYVPYP 282
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 PMPTMPIP 8
PMP +P P
Sbjct: 275 PMPYVPYP 282
>sp|REV_HV1ZH|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 PTMPIPYL 10
PT P+P+L
Sbjct: 41 PTEPVPFL 48
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 1 PMPTMP 6
P+PT+P
Sbjct: 593 PVPTIP 598
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 1 PMPTMP 6
P+PT+P
Sbjct: 593 PVPTIP 598
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 PMPTMP 6
P+PT+P
Sbjct: 593 PVPTIP 598
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 1 PMPTMP 6
P+PT+P
Sbjct: 593 PVPTIP 598
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 3 PTMPIPY 9
PT P+P+
Sbjct: 2096 PTPPVPF 2102
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 3 PTMPIPY 9
PT P+P+
Sbjct: 2097 PTPPVPF 2103
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 3 PTMPIPY 9
PT P+P+
Sbjct: 2096 PTPPVPF 2102
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 1 PMPTMPIP 8
P+P P P
Sbjct: 24 PIPVCPTP 31
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 1 PMPTMPIP 8
P+P P P
Sbjct: 24 PIPVCPTP 31
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 PTMPIP 8
PT PIP
Sbjct: 1753 PTKPIP 1758
>sp|PG034_MONPV|PROTEIN OPG034|Monkeypox virus (MPXV)
Query: 4 TMPIPY 9
T+PIPY
Sbjct: 162 TLPIPY 167
>sp|PG034_VAR67|PROTEIN OPG034|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 TMPIPY 9
T+PIPY
Sbjct: 162 TLPIPY 167
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 PTMPIPYL 10
P M IP+L
Sbjct: 746 PRMSIPFL 753
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 3 PTMPIPY 9
PT+P PY
Sbjct: 605 PTLPSPY 611
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 PTMPIPYL 10
P M IPY+
Sbjct: 768 PRMSIPYV 775
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PMPTMPIP 8
PMP PIP
Sbjct: 625 PMPLRPIP 632
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 PTMPI 7
PTMP+
Sbjct: 57 PTMPV 61
198|SequenceR|995|986|KAQNVPMPTM
>sp|PAP1_YMTV5|POLY(A) polymerase catalytic subunit|Yaba monkey tumor virus (strain
Query: 1 KAQNVPMPT 9
K N+PMP+
Sbjct: 317 KVTNMPMPS 325
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 1 KAQNVPMP 8
+AQ++P+P
Sbjct: 570 RAQHLPLP 577
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 QNVPMP 8
Q++PMP
Sbjct: 6807 QSIPMP 6812
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 1 KAQNVPMP 8
+AQ+ P+P
Sbjct: 133 RAQDTPVP 140
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 AQNVPMP 8
++N+P+P
Sbjct: 436 SENIPLP 442
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 KAQNVP 6
K+QN+P
Sbjct: 237 KSQNIP 242
>sp|BTRF1_EBVA8|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 AQNVPMPTM 10
+NVP+P +
Sbjct: 41 GENVPIPAL 49
>sp|BTRF1_EBVG|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 AQNVPMPTM 10
+NVP+P +
Sbjct: 41 GENVPIPAL 49
>sp|BTRF1_EBVB9|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 AQNVPMPTM 10
+NVP+P +
Sbjct: 41 GENVPIPAL 49
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 4 NVPMPT 9
N+P PT
Sbjct: 1017 NIPSPT 1022
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 KAQNVPMPT 9
KAQN P T
Sbjct: 1810 KAQNTPTLT 1818
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 KAQNVPMPT 9
KAQN P T
Sbjct: 1810 KAQNTPTLT 1818
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 KAQNVPMPT 9
KAQN P T
Sbjct: 1810 KAQNTPTLT 1818
199|SequenceR|1000|991|VARYTKAQNV
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 VARYTKAQNV 10
+AR+ + QNV
Sbjct: 428 IARFLRYQNV 437
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 VARYTKAQN 9
VARYT N
Sbjct: 1307 VARYTTISN 1315
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 VARYTKAQN 9
VARYT N
Sbjct: 1307 VARYTTISN 1315
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 VARYTKAQN 9
VARYT N
Sbjct: 1307 VARYTTISN 1315
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 RYTKAQ 8
RYTKAQ
Sbjct: 244 RYTKAQ 249
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 RYTKAQN 9
+Y+KA+N
Sbjct: 388 KYSKAEN 394
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 VARYTKAQNV 10
+ +Y KA+NV
Sbjct: 822 LCQYEKAKNV 831
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 VARYTKAQNV 10
+ +Y KA+NV
Sbjct: 822 LCQYEKAKNV 831
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 VARYTKAQNV 10
+ +Y KA+NV
Sbjct: 823 LCQYKKAKNV 832
200|SequenceR|1005|996|QPMNPVARYT
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 1 QPMNPVARY 9
QPM PV +Y
Sbjct: 274 QPMQPVIQY 282
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 QPMNPVA 7
+P+NPV+
Sbjct: 1180 EPVNPVS 1186
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 QPMNPVA 7
+P+NPV+
Sbjct: 1180 EPVNPVS 1186
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 5 PVARYT 10
PV RYT
Sbjct: 455 PVMRYT 460
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 2 PMNPVARY 9
P NP RY
Sbjct: 653 PDNPSGRY 660
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 4 NPVARY 9
NPV RY
Sbjct: 569 NPVERY 574
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 2 PMNPV 6
PMNPV
Sbjct: 306 PMNPV 310
201|SequenceR|1010|1001|QDQRQQPMNP
>sp|VE6_HPV18|PROTEIN E6|Human papillomavirus type 18
Query: 5 QQPMNP 10
Q+P+NP
Sbjct: 109 QKPLNP 114
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 2 DQRQQPM 8
DQ QQP+
Sbjct: 75 DQSQQPI 81
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 1 QDQRQQPMN 9
+D R+QP N
Sbjct: 111 EDVRKQPYN 119
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 1 QDQRQQPMN 9
+D R+QP N
Sbjct: 111 EDVRKQPYN 119
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 1 QDQRQQPMN 9
+D R+QP N
Sbjct: 111 EDVRKQPYN 119
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 1 QDQRQQPMN 9
+D R+QP N
Sbjct: 111 EDVRKQPYN 119
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 QQPMNP 10
+QP+NP
Sbjct: 736 RQPLNP 741
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 QQPMNP 10
+QP+NP
Sbjct: 736 RQPLNP 741
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 1 QDQRQQPMN 9
+D R+QP N
Sbjct: 111 EDVRKQPYN 119
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 1 QDQRQQPMN 9
+D R+QP N
Sbjct: 110 EDVRKQPYN 118
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 3 QRQQPMNP 10
Q+Q P+NP
Sbjct: 165 QKQYPINP 172
>sp|VE6_HPV45|PROTEIN E6|Human papillomavirus 45
Query: 5 QQPMNP 10
Q+P+NP
Sbjct: 109 QKPLNP 114
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 DQRQQPM 8
DQR QP+
Sbjct: 1057 DQRAQPL 1063
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 DQRQQPM 8
DQR QP+
Sbjct: 1056 DQRAQPL 1062
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 DQRQQPM 8
DQR QP+
Sbjct: 1056 DQRAQPL 1062
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QDQRQQPMN 9
QDQ Q+P++
Sbjct: 524 QDQVQKPLS 532
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 3 QRQQPMNP 10
Q+Q P+NP
Sbjct: 165 QKQYPINP 172
>sp|GQ2_HHV6U|GLYCOPROTEIN Q2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QDQRQQPMN 9
QDQ Q+P++
Sbjct: 82 QDQVQKPLS 90
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 1 QDQRQQPMN 9
QDQ Q+P++
Sbjct: 524 QDQVQKPLS 532
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 QRQQPMNP 10
Q+Q P+NP
Sbjct: 165 QKQYPINP 172
202|SequenceR|1015|1006|ASQHHQDQRQ
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SQHHQDQ 8
SQ+HQDQ
Sbjct: 573 SQYHQDQ 579
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SQHHQDQ 8
SQ+HQDQ
Sbjct: 573 SQYHQDQ 579
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 1 ASQHHQDQ 8
A HH DQ
Sbjct: 358 ADDHHGDQ 365
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 ASQHHQDQ 8
A HH DQ
Sbjct: 352 ADDHHGDQ 359
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 ASQHHQDQ 8
A HH DQ
Sbjct: 352 ADDHHGDQ 359
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 1 ASQHHQDQ 8
A HH DQ
Sbjct: 352 ADDHHGDQ 359
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 1 ASQHHQDQ 8
A HH DQ
Sbjct: 352 ADDHHGDQ 359
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 1 ASQHHQDQ 8
A HH DQ
Sbjct: 352 ADDHHGDQ 359
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 1 ASQHHQDQ 8
A HH DQ
Sbjct: 358 ADDHHGDQ 365
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 1 ASQHHQDQ 8
A HH DQ
Sbjct: 351 ADDHHGDQ 358
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 1 ASQHHQDQ 8
A HH DQ
Sbjct: 351 ADDHHGDQ 358
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 1 ASQHHQDQ 8
A HH DQ
Sbjct: 351 ADDHHGDQ 358
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 ASQHHQDQ 8
A HH DQ
Sbjct: 365 ADDHHGDQ 372
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 ASQHHQDQ 8
A HH DQ
Sbjct: 351 ADDHHGDQ 358
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 1 ASQHHQDQ 8
A HH DQ
Sbjct: 352 ADDHHGDQ 359
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 1 ASQHHQDQ 8
A HH DQ
Sbjct: 352 ADDHHGDQ 359
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 1 ASQHHQDQ 8
A HH DQ
Sbjct: 364 ADDHHGDQ 371
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 1 ASQHHQDQ 8
A HH DQ
Sbjct: 365 ADDHHGDQ 372
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 1 ASQHHQDQRQ 10
A QH QDQ Q
Sbjct: 10 ALQHQQDQPQ 19
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 1 ASQHHQDQRQ 10
A QH QDQ Q
Sbjct: 10 ALQHQQDQPQ 19
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 HHQDQR 9
HHQD +
Sbjct: 357 HHQDSK 362
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 SQHHQD 7
S+HH+D
Sbjct: 1007 SRHHRD 1012
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 ASQHHQDQRQ 10
+ +H Q+QR+
Sbjct: 1050 SKKHQQEQRR 1059
>sp|US03_HCMVM|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 QHHQDQR 9
Q+H D+R
Sbjct: 86 QYHHDER 92
203|SequenceR|1020|1011|APHMMASQHH
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 PHMMASQHH 10
PH + ++HH
Sbjct: 1144 PHSLVAEHH 1152
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 PHMMASQHH 10
PH + ++HH
Sbjct: 1144 PHSLVAEHH 1152
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 PHMMASQHH 10
PH + ++HH
Sbjct: 1144 PHSLVAEHH 1152
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 APHMMASQH 9
PH SQH
Sbjct: 5200 GPHEFCSQH 5208
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 APHMMASQH 9
PH SQH
Sbjct: 5177 GPHEFCSQH 5185
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 APHMMASQH 9
PH SQH
Sbjct: 5186 GPHEFCSQH 5194
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 APHMMASQH 9
PH SQH
Sbjct: 5173 GPHEFCSQH 5181
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 APHMMASQH 9
PH SQH
Sbjct: 4846 GPHEFCSQH 4854
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 APHMMASQH 9
PH SQH
Sbjct: 5211 GPHEFCSQH 5219
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 APHMMASQH 9
PH SQH
Sbjct: 5231 GPHEFCSQH 5239
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 APHMMASQH 9
PH SQH
Sbjct: 5261 GPHEFCSQH 5269
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 APHMMASQH 9
PH SQH
Sbjct: 4871 GPHEFCSQH 4879
>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)
Query: 2 PHMMASQHH 10
PH ++ HH
Sbjct: 399 PHRLSQSHH 407
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 PHMMASQH 9
PH + +QH
Sbjct: 1142 PHALVTQH 1149
>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain AD169)
Query: 2 PHMMASQHH 10
PH ++ HH
Sbjct: 399 PHRLSQSHH 407
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain
Query: 4 MMASQH 9
MMA+QH
Sbjct: 1 MMATQH 6
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 MMASQH 9
MMA+QH
Sbjct: 1 MMATQH 6
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 PHMMASQHH 10
PH + +++H
Sbjct: 1144 PHTLVTEYH 1152
204|SequenceR|1025|1016|PGAASAPHMM
>sp|IR09_HCMVA|UNCHARACTERIZED protein IRL9|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PGAASAPHM 9
PG A++PHM
Sbjct: 65 PGGATSPHM 73
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 4 ASAPHM 9
ASAPH+
Sbjct: 1058 ASAPHL 1063
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 ASAPHM 9
ASAPH+
Sbjct: 1060 ASAPHL 1065
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 4 ASAPHM 9
ASAPH+
Sbjct: 1063 ASAPHL 1068
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 4 ASAPHM 9
ASAPH+
Sbjct: 1056 ASAPHL 1061
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 4 ASAPHM 9
ASAPH+
Sbjct: 1057 ASAPHL 1062
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 4 ASAPHM 9
ASAPH+
Sbjct: 1056 ASAPHL 1061
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 4 ASAPHM 9
ASAPH+
Sbjct: 1056 ASAPHL 1061
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 3 AASAPHM 9
AAS PH+
Sbjct: 1060 AASPPHL 1066
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 AASAPHM 9
AAS PH+
Sbjct: 1060 AASPPHL 1066
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 1 PGAASAP 7
PG SAP
Sbjct: 19 PGTPSAP 25
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 PGAASAP 7
PGA SAP
Sbjct: 17 PGATSAP 23
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1352 PGSVTVPH 1359
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1352 PGSVTVPH 1359
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1352 PGSVTTPH 1359
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1352 PGSVTVPH 1359
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1357 PGSVTVPH 1364
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1352 PGSVTVPH 1359
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1356 PGSVTTPH 1363
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1352 PGSVTVPH 1359
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1356 PGSVTTPH 1363
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1356 PGSVTVPH 1363
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1352 PGSVTVPH 1359
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1350 PGSVTVPH 1357
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1352 PGSVTVPH 1359
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1356 PGSVTTPH 1363
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 PGAASAPHMM 10
PGA S+P +M
Sbjct: 284 PGADSSPPVM 293
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 PGAASAPHMM 10
PGA S+P +M
Sbjct: 284 PGADSSPPVM 293
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1352 PGSVTVPH 1359
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1353 PGSVTVPH 1360
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1353 PGSVTTPH 1360
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1354 PGSVTVPH 1361
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1356 PGSVTVPH 1363
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1353 PGSVTTPH 1360
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1356 PGSVTTPH 1363
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 PGAASAPH 8
PG A PH
Sbjct: 71 PGGAWTPH 78
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PGAASAPH 8
PG + PH
Sbjct: 1356 PGTVTTPH 1363
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PGAASAPH 8
PG + PH
Sbjct: 1356 PGTVTTPH 1363
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1357 PGSITVPH 1364
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1360 PGSITVPH 1367
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1352 PGSITVPH 1359
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1352 PGSITVPH 1359
>sp|CXCL1_HCMVM|CHEMOKINE vCXCL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PGAASAPH 8
PG +PH
Sbjct: 73 PGVCLSPH 80
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1358 PGSITVPH 1365
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1358 PGSITVPH 1365
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 PGAASAPH 8
PG+ + PH
Sbjct: 1357 PGSITVPH 1364
205|SequenceR|1030|1021|TAAIPPGAAS
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 AAIPPGAAS 10
AAIPP A S
Sbjct: 1906 AAIPPAAYS 1914
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 AAIPPGAAS 10
AAIPP A S
Sbjct: 1907 AAIPPAAYS 1915
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 2 AAIPPGAAS 10
AAIPP A S
Sbjct: 1906 AAIPPAAYS 1914
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 AAIPPGAAS 10
AAIPP A S
Sbjct: 1906 AAIPPAAYS 1914
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 AAIPPGAAS 10
AAIPP A S
Sbjct: 1906 AAIPPAAYS 1914
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 AAIPPGAAS 10
AAIPP A S
Sbjct: 1906 AAIPPAAYS 1914
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 AAIPPGAAS 10
AAIPP A S
Sbjct: 1906 AAIPPAAYS 1914
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 AAIPPGAAS 10
AAIPP A S
Sbjct: 1907 AAIPPAAYS 1915
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 AAIPPGAAS 10
AAIPP A S
Sbjct: 1907 AAIPPAAYS 1915
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 AAIPPGAA 9
A++PPG+A
Sbjct: 1950 ASLPPGSA 1957
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 3 AIPPGAAS 10
A+ PGAAS
Sbjct: 2186 AVAPGAAS 2193
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 3 AIPPGAAS 10
A+ PGAAS
Sbjct: 2185 AVAPGAAS 2192
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 3 AIPPGAAS 10
A+ PGAAS
Sbjct: 2185 AVAPGAAS 2192
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 2 AAIPPG 7
+A+PPG
Sbjct: 394 SAVPPG 399
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 4 IPPGAA 9
+PPGAA
Sbjct: 548 VPPGAA 553
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 AAIPPG 7
+A+PPG
Sbjct: 394 SALPPG 399
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 PPGAAS 10
PPGAAS
Sbjct: 1822 PPGAAS 1827
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 3 AIPPGAAS 10
++PPGA S
Sbjct: 33 SVPPGARS 40
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 AIPPGAAS 10
AIPPG+ +
Sbjct: 1350 AIPPGSVT 1357
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 AIPPGAA 9
A PPG A
Sbjct: 1590 AFPPGKA 1596
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 AIPPGAA 9
A PPG A
Sbjct: 1590 AFPPGKA 1596
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 AIPPGAA 9
A PPG A
Sbjct: 1590 AFPPGRA 1596
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 AIPPG 7
A+PPG
Sbjct: 1569 AVPPG 1573
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 AIPPGAA 9
A PPG A
Sbjct: 1590 AFPPGRA 1596
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 AIPPGAA 9
A PPG A
Sbjct: 1590 AFPPGRA 1596
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 AIPPGAA 9
A PPG A
Sbjct: 1590 AFPPGRA 1596
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 AIPPGAA 9
A PPG A
Sbjct: 1590 AFPPGRA 1596
206|SequenceR|1035|1026|SYAPPTAAIP
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YAPPTAA 8
YAPPTA
Sbjct: 428 YAPPTAG 434
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 SYAPPTAAIP 10
SYAPP A P
Sbjct: 464 SYAPPGAGAP 473
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 YAPPTAAI 9
Y PPTA++
Sbjct: 3233 YQPPTASV 3240
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 YAPPTAAI 9
Y PPTA++
Sbjct: 3271 YQPPTASV 3278
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 YAPPTAAI 9
Y PPTA++
Sbjct: 3291 YQPPTASV 3298
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 YAPPTAAI 9
Y PPTA++
Sbjct: 3321 YQPPTASV 3328
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 YAPPTAAI 9
Y PPTA++
Sbjct: 3233 YQPPTASV 3240
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 YAPPTAAI 9
Y PPTA++
Sbjct: 3271 YQPPTASV 3278
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 YAPPTAAI 9
Y PPTA++
Sbjct: 3291 YQPPTASV 3298
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 YAPPTAAI 9
Y PPTA++
Sbjct: 3321 YQPPTASV 3328
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 YAPPTAAIP 10
YAPP A++P
Sbjct: 823 YAPPGASVP 831
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 YAPPTAAIP 10
YAPP A++P
Sbjct: 820 YAPPGASVP 828
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 SYAPPTAAIP 10
SY PP + P
Sbjct: 493 SYTPPKSTEP 502
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 4 PPTAAIP 10
PPTAAIP
Sbjct: 78 PPTAAIP 84
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 SYAPPTAAIP 10
+YAPP A P
Sbjct: 464 AYAPPGANAP 473
Query: 3 APPTAAIP 10
APP +IP
Sbjct: 746 APPRMSIP 753
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 SYAPPTAAIP 10
+Y+PP A++P
Sbjct: 464 AYSPPGASVP 473
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 SYAPPTAAIP 10
+Y+PP A++P
Sbjct: 465 AYSPPGASVP 474
Query: 2 YAPPTAAIP 10
Y PP ++P
Sbjct: 717 YVPPGGSVP 725
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 SYAPPTAAIP 10
SYAPP A P
Sbjct: 473 SYAPPGAKAP 482
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 SYAPPTAAIP 10
SYAPP A P
Sbjct: 473 SYAPPGAEAP 482
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 SYAPPTAAIP 10
++APP A IP
Sbjct: 885 AFAPPGATIP 894
Query: 1 SYAPPTAAIP 10
+Y PP A IP
Sbjct: 569 AYYPPNAYIP 578
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 SYAPPTAAIP 10
+ +PPT IP
Sbjct: 1309 TLSPPTVTIP 1318
>sp|ORF28_HHV8P|PROTEIN ORF28|Human herpesvirus 8 type P
Query: 1 SYAPPTAAI 9
S+APPT I
Sbjct: 81 SHAPPTVGI 89
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 YAPPT 6
Y+PPT
Sbjct: 2927 YSPPT 2931
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 YAPPT 6
Y+PPT
Sbjct: 2927 YSPPT 2931
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 SYAPPTAAIP 10
SY PP A P
Sbjct: 542 SYTPPGAGEP 551
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 YAPPTAA 8
Y PPT +
Sbjct: 2953 YTPPTVS 2959
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 YAPPTAA 8
Y PPT +
Sbjct: 2953 YTPPTVS 2959
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 APPTAAIP 10
APP +IP
Sbjct: 745 APPRMSIP 752
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 APPTAAIP 10
APP +IP
Sbjct: 746 APPRMSIP 753
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 SYAPPTA 7
SYAPP A
Sbjct: 474 SYAPPGA 480
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 APPTAAIP 10
APP +IP
Sbjct: 744 APPRMSIP 751
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 SYAPPTA 7
SYAPP A
Sbjct: 474 SYAPPGA 480
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 SYAPPTAAIP 10
SY PP A P
Sbjct: 464 SYTPPGAGEP 473
207|SequenceR|1040|1031|AVYQTSYAPP
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 2 VYQTSYAPP 10
VY S+APP
Sbjct: 238 VYNDSHAPP 246
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 YQTSYAPP 10
YQT++ PP
Sbjct: 524 YQTAFVPP 531
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 VYQTSYAPP 10
VYQ Y PP
Sbjct: 733 VYQIMYVPP 741
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 VYQTSYAPP 10
VYQ Y PP
Sbjct: 733 VYQIMYVPP 741
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 3 YQTSYAP 9
YQ S+AP
Sbjct: 218 YQQSFAP 224
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 3 YQTSYAP 9
YQ S+AP
Sbjct: 218 YQQSFAP 224
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 3 YQTSYAP 9
YQ S+AP
Sbjct: 218 YQQSFAP 224
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 3 YQTSYAP 9
YQ S+AP
Sbjct: 218 YQQSFAP 224
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 3 YQTSYAP 9
YQ S+AP
Sbjct: 218 YQQSFAP 224
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 3 YQTSYAP 9
YQ S+AP
Sbjct: 218 YQQSFAP 224
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 3 YQTSYAP 9
YQ S+AP
Sbjct: 218 YQQSFAP 224
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 3 YQTSYAP 9
YQ S+AP
Sbjct: 218 YQRSFAP 224
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 VYQTSYAPP 10
VYQ Y PP
Sbjct: 730 VYQIMYIPP 738
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 VYQTSYAPP 10
VYQ Y PP
Sbjct: 732 VYQIMYIPP 740
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 VYQTSYAPP 10
VYQ Y PP
Sbjct: 732 VYQIMYIPP 740
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 VYQTSYAPP 10
VYQ Y PP
Sbjct: 730 VYQIMYIPP 738
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 VYQTSYAPP 10
VYQ Y PP
Sbjct: 736 VYQLMYIPP 744
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 3 YQTSYAP 9
Y TSY P
Sbjct: 147 YNTSYLP 153
>sp|VIL6_HHV8P|VIRAL interleukin-6 homolog|Human herpesvirus 8 type P
Query: 4 QTSYAPP 10
+T Y+PP
Sbjct: 145 KTHYSPP 151
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 3 YQTSYAPP 10
YQT PP
Sbjct: 15 YQTHRLPP 22
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 4 QTSYAP 9
QT+YAP
Sbjct: 42 QTNYAP 47
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 QTSYAP 9
QT+YAP
Sbjct: 42 QTNYAP 47
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 2 VYQTSYAPP 10
+YQT Y P
Sbjct: 562 LYQTRYGTP 570
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 QTSYAP 9
QT+YAP
Sbjct: 42 QTNYAP 47
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 QTSYAP 9
QT+YAP
Sbjct: 42 QTNYAP 47
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 2 VYQTSYAPP 10
VY+T+ PP
Sbjct: 641 VYKTTAVPP 649
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 VYQTSYAPP 10
VY+T+ PP
Sbjct: 642 VYKTTAVPP 650
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 VYQTSYAP 9
+Y+TS+ P
Sbjct: 1950 IYKTSWLP 1957
208|SequenceR|1045|1036|QQPSYAVYQT
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 PSYAVYQT 10
P+Y+VY++
Sbjct: 2864 PTYSVYKS 2871
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 PSYAVYQT 10
P+Y+VY++
Sbjct: 2834 PTYSVYKS 2841
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 PSYAVYQT 10
P+Y+VY++
Sbjct: 2814 PTYSVYKS 2821
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 PSYAVYQT 10
P+Y+VY++
Sbjct: 2864 PTYSVYKS 2871
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 QQPSYAVYQT 10
++PS+A+ +T
Sbjct: 433 EEPSFAIMRT 442
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 PSYAVYQT 10
PSYA Y T
Sbjct: 3929 PSYAAYAT 3936
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 PSYAVYQT 10
PSYA Y T
Sbjct: 3929 PSYAAYAT 3936
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 PSYAVYQT 10
P+Y+VY++
Sbjct: 2814 PTYSVYKS 2821
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 PSYAVYQT 10
P+Y+VY++
Sbjct: 2834 PTYSVYKS 2841
>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain
Query: 1 QQPSYAVYQ 9
+ PSY +YQ
Sbjct: 388 KSPSYPIYQ 396
>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)
Query: 1 QQPSYAVYQ 9
+ PSY +YQ
Sbjct: 388 KSPSYPIYQ 396
>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)
Query: 1 QQPSYAVYQ 9
+ PSY +YQ
Sbjct: 388 KSPSYPIYQ 396
>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)
Query: 1 QQPSYAVYQ 9
+ PSY +YQ
Sbjct: 388 KSPSYPIYQ 396
>sp|FUS_MUMPM|FUSION glycoprotein F0|Mumps virus genotype B (strain
Query: 1 QQPSYAVYQ 9
+ PSY +YQ
Sbjct: 388 KSPSYPIYQ 396
>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)
Query: 1 QQPSYAVYQ 9
+ PSY +YQ
Sbjct: 388 KSPSYPIYQ 396
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 QQPSYAVYQ 9
Q P AVYQ
Sbjct: 917 QMPHLAVYQ 925
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 QQPSYAVYQ 9
Q P AVYQ
Sbjct: 917 QMPHLAVYQ 925
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 QQPSYAVYQ 9
Q P AVYQ
Sbjct: 917 QMPHLAVYQ 925
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 2 QPSYAVYQ 9
QP+Y +Y+
Sbjct: 769 QPNYNIYK 776
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 PSYAVYQT 10
PS+ Y+T
Sbjct: 3639 PSFVAYET 3646
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 PSYAVYQT 10
PS+ Y+T
Sbjct: 3639 PSFVAYET 3646
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 3 PSYAVYQT 10
P YAVY T
Sbjct: 188 PIYAVYGT 195
>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 3 PSYAVYQT 10
P YAVY T
Sbjct: 188 PIYAVYGT 195
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 QPSYAVYQT 10
QP VY+T
Sbjct: 376 QPKVIVYET 384
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 QPSYAVYQT 10
QP VY+T
Sbjct: 376 QPKVIVYET 384
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 QPSYAVYQT 10
QP VY+T
Sbjct: 376 QPKVIVYET 384
209|SequenceR|1050|1041|PQNPFQQPSY
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 PQNPFQQPSY 10
P NPF+ P Y
Sbjct: 378 PYNPFEDPDY 387
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 2 QNPFQQPSY 10
Q PF+QP+Y
Sbjct: 62 QAPFRQPTY 70
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 PQNPF 5
PQNPF
Sbjct: 626 PQNPF 630
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 PQNPF 5
PQNPF
Sbjct: 626 PQNPF 630
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 PQNPF 5
PQNPF
Sbjct: 626 PQNPF 630
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 PQNPF 5
PQNPF
Sbjct: 626 PQNPF 630
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 3 NPFQQPSY 10
NP + P+Y
Sbjct: 379 NPLEDPNY 386
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QNPFQQPS 9
QNPF +PS
Sbjct: 341 QNPFCEPS 348
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PQNPFQQPSY 10
P NP+ P++
Sbjct: 663 PTNPYNTPTF 672
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PQNPFQQPSY 10
P NP+ P++
Sbjct: 661 PTNPYNSPTF 670
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PQNPFQQPSY 10
P NP+ P++
Sbjct: 663 PTNPYNTPTF 672
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PQNPFQQPSY 10
P NP+ P++
Sbjct: 663 PTNPYNTPTF 672
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PQNPFQQPSY 10
P NP+ P++
Sbjct: 661 PTNPYNTPTF 670
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PQNPFQQPSY 10
P NP+ P++
Sbjct: 662 PTNPYNTPTF 671
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PQNPFQQPSY 10
P NP+ P++
Sbjct: 664 PTNPYNTPTF 673
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PQNPFQQPSY 10
P NP+ P++
Sbjct: 663 PTNPYNTPTF 672
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 2 QNPFQQPS 9
QNP++ PS
Sbjct: 296 QNPYRHPS 303
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PQNPFQQPSY 10
P NP+ P++
Sbjct: 664 PTNPYNTPTF 673
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PQNPFQQPSY 10
P NP+ P++
Sbjct: 663 PTNPYNTPTF 672
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 NPFQQP 8
NPF QP
Sbjct: 1769 NPFPQP 1774
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 NPFQQP 8
NPF QP
Sbjct: 1769 NPFPQP 1774
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PQNPFQQPSY 10
P NP+ P++
Sbjct: 662 PTNPYNTPTF 671
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 NPFQQP 8
NPF QP
Sbjct: 1769 NPFPQP 1774
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 PQNPFQ 6
PQ PFQ
Sbjct: 451 PQTPFQ 456
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 PQNPF 5
P+NPF
Sbjct: 628 PKNPF 632
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 PQNPF 5
P+NPF
Sbjct: 628 PKNPF 632
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 1 PQNPF 5
P+NPF
Sbjct: 628 PKNPF 632
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 PQNPFQ 6
PQ PFQ
Sbjct: 451 PQTPFQ 456
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PQNPFQQPSY 10
P NP+ P++
Sbjct: 663 PTNPYNTPTF 672
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 PQNPFQQPS 9
PQ P+++ S
Sbjct: 1706 PQKPYRKQS 1714
>sp|VE8E2_HPV29|PROTEIN E8^E2C|Human papillomavirus 29
Query: 2 QNPFQQPS 9
QNP++ PS
Sbjct: 96 QNPYRHPS 103
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 PQNPFQQPSY 10
P PF P Y
Sbjct: 1810 PSKPFGCPVY 1819
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 PQNPFQQPSY 10
P PF P Y
Sbjct: 1810 PSKPFGCPVY 1819
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 NPFQQPS 9
NPF QP+
Sbjct: 604 NPFAQPA 610
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 NPFQQPS 9
NPF QP+
Sbjct: 604 NPFAQPA 610
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 NPFQQPS 9
NPF QP+
Sbjct: 604 NPFAQPA 610
>sp|VL2_HPV67|MINOR capsid protein L2|Human papillomavirus 67
Query: 1 PQNPFQQPS 9
P PF QPS
Sbjct: 364 PDTPFPQPS 372
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 3 NPFQQPS 9
NPFQ PS
Sbjct: 71 NPFQPPS 77
>sp|GD_CHV1|ENVELOPE glycoprotein D|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 2 QNPFQQPS 9
+NPFQ PS
Sbjct: 69 ENPFQTPS 76
>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)
Query: 2 QNPFQQPS 9
++PFQ PS
Sbjct: 70 EDPFQPPS 77
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 PQNPFQ 6
PQ PFQ
Sbjct: 468 PQTPFQ 473
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 PQNPFQ 6
PQ PFQ
Sbjct: 464 PQTPFQ 469
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 PQNPFQ 6
PQ PFQ
Sbjct: 459 PQTPFQ 464
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 PQNPFQ 6
PQ PFQ
Sbjct: 462 PQTPFQ 467
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 PQNPFQ 6
PQ PFQ
Sbjct: 452 PQTPFQ 457
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 PQNPFQ 6
PQ PFQ
Sbjct: 462 PQTPFQ 467
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 1 PQNPFQ 6
PQ PFQ
Sbjct: 452 PQTPFQ 457
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 PQNPFQ 6
PQ PFQ
Sbjct: 462 PQTPFQ 467
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 PQNPFQ 6
PQ PFQ
Sbjct: 462 PQTPFQ 467
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 PQNPFQ 6
PQ PFQ
Sbjct: 452 PQTPFQ 457
210|SequenceR|1055|1046|VHQVLPQNPF
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 VHQVLPQNP 9
+HQV+ Q P
Sbjct: 978 LHQVMTQQP 986
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 VHQVLPQNP 9
+HQV+ Q P
Sbjct: 978 LHQVMTQQP 986
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 VHQVLPQNP 9
+HQV+ Q P
Sbjct: 978 LHQVMTQQP 986
>sp|X_HBVC5|PROTEIN X|Hepatitis B virus genotype C
Query: 2 HQVLPQ 7
HQVLP+
Sbjct: 86 HQVLPK 91
>sp|X_HBVC3|PROTEIN X|Hepatitis B virus genotype C
Query: 2 HQVLPQ 7
HQVLP+
Sbjct: 86 HQVLPK 91
>sp|X_HBVA8|PROTEIN X|Hepatitis B virus genotype A3
Query: 2 HQVLPQ 7
HQ+LP+
Sbjct: 86 HQILPK 91
>sp|X_HBVA6|PROTEIN X|Hepatitis B virus genotype A1
Query: 2 HQVLPQ 7
HQ+LP+
Sbjct: 86 HQILPK 91
>sp|X_HBVE2|PROTEIN X|Hepatitis B virus genotype E
Query: 2 HQVLPQ 7
HQ+LP+
Sbjct: 86 HQILPK 91
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 4 VLPQNPF 10
+LPQ PF
Sbjct: 249 LLPQEPF 255
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 VLPQNP 9
V+P+NP
Sbjct: 405 VIPENP 410
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 VLPQNP 9
V+P+NP
Sbjct: 405 VIPENP 410
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 VLPQNP 9
V+P+NP
Sbjct: 405 VIPENP 410
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 VLPQNP 9
V+P+NP
Sbjct: 405 VIPENP 410
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 VLPQNP 9
V+P+NP
Sbjct: 405 VIPENP 410
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 VLPQNP 9
V+P+NP
Sbjct: 405 VIPENP 410
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 HQVLPQNPF 10
HQV NPF
Sbjct: 502 HQVPLPNPF 510
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 HQVLPQNPF 10
HQV NPF
Sbjct: 502 HQVPLPNPF 510
>sp|X_HBVD4|PROTEIN X|Hepatitis B virus genotype D
Query: 2 HQVLPQ 7
HQ+LP+
Sbjct: 86 HQILPK 91
>sp|X_HBVC7|PROTEIN X|Hepatitis B virus genotype C
Query: 2 HQVLPQ 7
HQVLP+
Sbjct: 86 HQVLPK 91
>sp|X_HBVC8|PROTEIN X|Hepatitis B virus genotype C
Query: 2 HQVLPQ 7
HQVLP+
Sbjct: 86 HQVLPK 91
>sp|X_HBVC2|PROTEIN X|Hepatitis B virus genotype C
Query: 2 HQVLPQ 7
HQVLP+
Sbjct: 86 HQVLPK 91
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 3 QVLPQNP 9
+++PQNP
Sbjct: 869 KLVPQNP 875
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 HQVLPQNP 9
H VL QNP
Sbjct: 569 HSVLTQNP 576
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 HQVLPQNP 9
H VL QNP
Sbjct: 569 HSVLTQNP 576
>sp|X_HBVC1|PROTEIN X|Hepatitis B virus genotype C
Query: 2 HQVLPQ 7
HQVLP+
Sbjct: 86 HQVLPK 91
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 HQVLPQNP 9
H VL QNP
Sbjct: 569 HSVLTQNP 576
>sp|X_HBVE4|PROTEIN X|Hepatitis B virus genotype E
Query: 2 HQVLPQ 7
HQ+LP+
Sbjct: 86 HQILPK 91
>sp|X_HBVE1|PROTEIN X|Hepatitis B virus genotype E
Query: 2 HQVLPQ 7
HQ+LP+
Sbjct: 86 HQILPK 91
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 1 VHQVLPQN 8
V+Q++P N
Sbjct: 275 VYQIIPAN 282
>sp|X_HBVD3|PROTEIN X|Hepatitis B virus genotype D
Query: 2 HQVLPQ 7
HQ+LP+
Sbjct: 86 HQILPK 91
>sp|X_HBVA9|PROTEIN X|Hepatitis B virus genotype A3
Query: 2 HQVLPQ 7
HQ+LP+
Sbjct: 86 HQILPK 91
>sp|X_HBVE3|PROTEIN X|Hepatitis B virus genotype E
Query: 2 HQVLPQ 7
HQ+LP+
Sbjct: 86 HQILPK 91
>sp|X_HBVD6|PROTEIN X|Hepatitis B virus genotype D
Query: 2 HQVLPQ 7
HQ+LP+
Sbjct: 86 HQILPK 91
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 VHQVLPQNP 9
VH + QNP
Sbjct: 122 VHHIQGQNP 130
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 1 VHQVLPQNPF 10
+H+ L Q PF
Sbjct: 56 LHEALRQAPF 65
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VHQVLPQNPF 10
VH+++P F
Sbjct: 171 VHKIIPNKTF 180
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VHQVLPQNPF 10
VH+++P F
Sbjct: 171 VHKIIPNKTF 180
>sp|X_HBVCJ|PROTEIN X|Hepatitis B virus genotype C
Query: 2 HQVLPQ 7
HQVLP+
Sbjct: 86 HQVLPK 91
>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 VHQVLPQNP 9
+ Q LP NP
Sbjct: 73 IMQTLPANP 81
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 1 VHQVLPQN 8
VH +LP +
Sbjct: 540 VHNILPHD 547
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 1 VHQVLPQ 7
+H VLPQ
Sbjct: 640 LHTVLPQ 646
>sp|X_HBVA4|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 HQVLPQ 7
HQ+LP+
Sbjct: 86 HQILPK 91
>sp|X_HBVA3|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 HQVLPQ 7
HQ+LP+
Sbjct: 86 HQILPK 91
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 VHQVLPQN 8
VH +LP +
Sbjct: 540 VHNILPHD 547
>sp|X_HBVA2|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 HQVLPQ 7
HQ+LP+
Sbjct: 86 HQILPK 91
>sp|LMP1_EBVG|LATENT membrane protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 HQVLPQNP 9
H LP NP
Sbjct: 293 HDPLPHNP 300
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 4 VLPQNP 9
VLP NP
Sbjct: 575 VLPDNP 580
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 VHQVLPQNP 9
+H + QNP
Sbjct: 122 IHHIQGQNP 130
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HQVLPQNP 9
+QV PQ+P
Sbjct: 93 YQVNPQHP 100
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HQVLPQNP 9
+QV PQ+P
Sbjct: 93 YQVNPQHP 100
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 VHQVLPQNP 9
+H + QNP
Sbjct: 122 IHHIQGQNP 130
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 VHQVLPQNP 9
+H + QNP
Sbjct: 122 IHHIQGQNP 130
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 VHQVLPQNP 9
+H + QNP
Sbjct: 122 IHHIQGQNP 130
>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 VHQVLPQNP 9
+ Q LP NP
Sbjct: 73 ILQTLPANP 81
>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 VHQVLPQNP 9
+ Q LP NP
Sbjct: 73 ILQTLPANP 81
>sp|LMP1_EBVA8|LATENT membrane protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 HQVLPQNP 9
H LP NP
Sbjct: 298 HDPLPHNP 305
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 LPQNPF 10
LP+NP+
Sbjct: 168 LPKNPY 173
211|SequenceR|1060|1051|SQYHPVHQVL
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 SQYHPVH 7
S YHP H
Sbjct: 5914 SGYHPAH 5920
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 SQYHPVHQVL 10
+Q PVHQ L
Sbjct: 134 AQGQPVHQAL 143
Query: 4 HPVH 7
HPVH
Sbjct: 212 HPVH 215
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 SQYHPVHQVL 10
+Q PVHQ L
Sbjct: 134 AQGQPVHQAL 143
Query: 4 HPVH 7
HPVH
Sbjct: 212 HPVH 215
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 4 HPVHQ 8
HP+HQ
Sbjct: 303 HPIHQ 307
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 QYHPVHQVL 10
Q PVHQ L
Sbjct: 139 QGQPVHQAL 147
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 QYHPVHQVL 10
Q PVHQ L
Sbjct: 139 QGQPVHQAL 147
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 4 HPVHQ 8
HP+HQ
Sbjct: 303 HPIHQ 307
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 4 HPVHQ 8
HP+HQ
Sbjct: 303 HPIHQ 307
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 4 HPVHQ 8
HP+HQ
Sbjct: 303 HPIHQ 307
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 QYHPVHQVL 10
Q PVHQ L
Sbjct: 139 QGQPVHQAL 147
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 4 HPVHQ 8
HP+HQ
Sbjct: 303 HPIHQ 307
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 QYHPVHQVL 10
Q PVHQ L
Sbjct: 139 QGQPVHQAL 147
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 YHPVH 7
YHP H
Sbjct: 5954 YHPAH 5958
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 YHPVH 7
YHP H
Sbjct: 5974 YHPAH 5978
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 YHPVH 7
YHP H
Sbjct: 6004 YHPAH 6008
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 4 HPVHQVL 10
HPVHQ L
Sbjct: 299 HPVHQSL 305
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 4 HPVHQVL 10
HP+H+V+
Sbjct: 301 HPLHEVV 307
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 YHPVH 7
YHP H
Sbjct: 1631 YHPTH 1635
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 YHPVH 7
YHP H
Sbjct: 1631 YHPTH 1635
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 YHPVH 7
YHP H
Sbjct: 1631 YHPTH 1635
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SQYHPVHQV 9
S+Y+P H V
Sbjct: 377 SKYYPPHSV 385
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 PVHQVL 10
P HQVL
Sbjct: 1710 PTHQVL 1715
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 PVHQVL 10
P HQVL
Sbjct: 1718 PTHQVL 1723
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 PVHQVL 10
P HQVL
Sbjct: 1718 PTHQVL 1723
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 YHPVHQV 9
YHP++ +
Sbjct: 421 YHPINDI 427
>sp|TRX1_HCMVM|TRIPLEX capsid protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 YHPVHQVL 10
YH HQ L
Sbjct: 39 YHADHQAL 46
>sp|TRX1_HCMVA|TRIPLEX capsid protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 YHPVHQVL 10
YH HQ L
Sbjct: 39 YHADHQAL 46
>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QYHPVHQ 8
+YHP H+
Sbjct: 407 RYHPEHE 413
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 4 HPVHQ 8
HP+H+
Sbjct: 2146 HPIHE 2150
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 218 HPVH 221
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 214 HPVH 217
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 219 HPVH 222
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 214 HPVH 217
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 HPVHQV 9
H VHQV
Sbjct: 1707 HQVHQV 1712
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 213 HPVH 216
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 222 HPVH 225
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 217 HPVH 220
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 222 HPVH 225
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 217 HPVH 220
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 214 HPVH 217
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 212 HPVH 215
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 218 HPVH 221
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 212 HPVH 215
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 212 HPVH 215
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 214 HPVH 217
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 218 HPVH 221
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 212 HPVH 215
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 212 HPVH 215
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 SQYHPVH 7
S+Y+P H
Sbjct: 933 SEYYPKH 939
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 SQYHPVH 7
S+Y+P H
Sbjct: 940 SEYYPKH 946
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 213 HPVH 216
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 218 HPVH 221
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 216 HPVH 219
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 SQYHPVH 7
S+Y+P H
Sbjct: 940 SEYYPKH 946
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 SQYHPVH 7
S+Y+P H
Sbjct: 936 SEYYPKH 942
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HPVH 7
HPVH
Sbjct: 212 HPVH 215
212|SequenceR|1065|1056|VHPHQSQYHP
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VHPHQSQYH 9
VHP Q H
Sbjct: 353 VHPETRQAH 361
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 VHPHQSQYHP 10
++ H+S+ HP
Sbjct: 870 LYMHESKQHP 879
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 HPHQ 5
HPHQ
Sbjct: 292 HPHQ 295
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 2 HPHQ 5
HPHQ
Sbjct: 292 HPHQ 295
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 2 HPHQ 5
HPHQ
Sbjct: 292 HPHQ 295
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 HPHQ 5
HPHQ
Sbjct: 292 HPHQ 295
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 VHPHQSQYHP 10
+HP+ QY+P
Sbjct: 193 MHPNYEQYNP 202
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VHPHQSQYH 9
VHP Q H
Sbjct: 353 VHPDTRQAH 361
>sp|J1S_HCMVA|UNCHARACTERIZED protein J1S|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VHPHQSQYHP 10
VH S++HP
Sbjct: 168 VHTRNSKFHP 177
>sp|VP30_MABVM|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 PHQSQYHP 10
PH + YHP
Sbjct: 29 PHYTNYHP 36
>sp|J1L_HCMVA|UNCHARACTERIZED protein J1L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VHPHQSQYHP 10
VH S++HP
Sbjct: 285 VHTRNSKFHP 294
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 HPHQSQYH 9
H H+ YH
Sbjct: 1027 HNHRPGYH 1034
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 HPHQSQYH 9
H H+ YH
Sbjct: 1027 HNHRPGYH 1034
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 HPHQSQYH 9
H H+ YH
Sbjct: 1027 HNHRPGYH 1034
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 HPHQSQYH 9
H H+ YH
Sbjct: 1027 HNHRPGYH 1034
213|SequenceR|1070|1061|IVPSYVHPHQ
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 IVPSYVHPHQ 10
+VPS +HP Q
Sbjct: 165 VVPSIIHPQQ 174
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 VPSYVHPHQ 10
VP+Y+HP +
Sbjct: 1649 VPAYIHPRK 1657
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 VPSYVHPHQ 10
VP+Y+HP +
Sbjct: 1649 VPAYIHPRK 1657
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 VPSYVHPHQ 10
VP+Y+HP +
Sbjct: 1649 VPAYIHPRK 1657
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 VPSYVHPHQ 10
VP Y+HP +
Sbjct: 1649 VPEYIHPRK 1657
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 IVPSYVH 7
IVPSY+H
Sbjct: 642 IVPSYLH 648
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 VPSYVH 7
+PSYVH
Sbjct: 160 MPSYVH 165
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 VPSYVH 7
+PSYVH
Sbjct: 160 MPSYVH 165
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 VPSYVH 7
+PSYVH
Sbjct: 160 MPSYVH 165
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 VPSYVH 7
+PSYVH
Sbjct: 160 MPSYVH 165
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 VPSYVH 7
+PSYVH
Sbjct: 160 MPSYVH 165
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 VPSYVH 7
+PSYVH
Sbjct: 160 MPSYVH 165
>sp|PG038_VACCC|EARLY protein OPG038|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IVPSYVHP 8
I P Y+HP
Sbjct: 170 INPHYLHP 177
>sp|PG038_VARV|EARLY protein OPG038|Variola virus
Query: 1 IVPSYVHP 8
I P Y+HP
Sbjct: 170 INPHYLHP 177
>sp|PG038_VAR67|EARLY protein OPG038|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 IVPSYVHP 8
I P Y+HP
Sbjct: 170 INPHYLHP 177
>sp|PG038_MONPV|EARLY protein OPG038|Monkeypox virus (MPXV)
Query: 1 IVPSYVHP 8
I P Y+HP
Sbjct: 170 INPHYLHP 177
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 VPSYVHPH 9
VP +HPH
Sbjct: 2278 VPDDIHPH 2285
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 PSYVHP 8
P YVHP
Sbjct: 149 PFYVHP 154
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 PSYVHP 8
P YVHP
Sbjct: 149 PFYVHP 154
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 PSYVHP 8
P YVHP
Sbjct: 149 PFYVHP 154
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 IVPSYVHPHQ 10
+V +YV P Q
Sbjct: 1911 VVSTYVPPEQ 1920
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 PSYVHP 8
P YVHP
Sbjct: 149 PFYVHP 154
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 PSYVHP 8
P YVHP
Sbjct: 149 PFYVHP 154
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 PSYVHP 8
P YVHP
Sbjct: 149 PFYVHP 154
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 PSYVHP 8
P YVHP
Sbjct: 149 PFYVHP 154
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 PSYVHP 8
P YVHP
Sbjct: 149 PFYVHP 154
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 PSYVHP 8
P YVHP
Sbjct: 149 PFYVHP 154
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 IVPSYVHPH 9
VP +HPH
Sbjct: 2281 FVPDDIHPH 2289
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 VPSYVHPH 9
+ +VHPH
Sbjct: 1614 ISDHVHPH 1621
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 VPSYVHPH 9
+ +VHPH
Sbjct: 1614 ISDHVHPH 1621
>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60
Query: 5 YVHPH 9
Y+HPH
Sbjct: 508 YLHPH 512
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 5 YVHPHQ 10
Y+H HQ
Sbjct: 1296 YMHKHQ 1301
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IVPSYVHP 8
I+PS HP
Sbjct: 445 ILPSVCHP 452
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 IVPSYVHP 8
I+PS HP
Sbjct: 445 ILPSVCHP 452
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 IVPSYVHPHQ 10
+VP VHP +
Sbjct: 1640 VVPPAVHPRK 1649
>sp|SCP_HHV2H|SMALL capsomere-interacting protein|Human herpesvirus 2 (strain HG52)
Query: 4 SYVHPH 9
SY HPH
Sbjct: 39 SYPHPH 44
>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)
Query: 2 VPSYVHPHQ 10
+ +YVH H+
Sbjct: 284 INAYVHGHK 292
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 IVPSYVHP 8
++PS HP
Sbjct: 445 LLPSLCHP 452
>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)
Query: 3 PSYVHPH 9
PS HPH
Sbjct: 183 PSLGHPH 189
214|SequenceR|1075|1066|RANGQIVPSY
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 1 RANGQIVPS 9
R N QI+PS
Sbjct: 473 RGNPQILPS 481
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 3 NGQIVPSY 10
N Q+VP+Y
Sbjct: 59 NHQVVPAY 66
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 2 ANGQIVPSY 10
ANG +VP +
Sbjct: 97 ANGDLVPHF 105
>sp|MATRX_NIPAV|MATRIX protein|Nipah virus
Query: 3 NGQIVPSY 10
NG ++P Y
Sbjct: 40 NGSMIPKY 47
>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 NGQIVPSY 10
NGQI+ +Y
Sbjct: 266 NGQIINTY 273
>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 3 NGQIVPSY 10
NGQI+ +Y
Sbjct: 266 NGQIINTY 273
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 NGQIVPSY 10
NGQI+ +Y
Sbjct: 266 NGQIINTY 273
>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 NGQIVPSY 10
NGQI+ +Y
Sbjct: 266 NGQIINTY 273
>sp|VP6_ROTHS|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 NGQIVPSY 10
NGQI+ +Y
Sbjct: 266 NGQIINTY 273
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 NGQIVPSY 10
NGQI+ +Y
Sbjct: 266 NGQIINTY 273
>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 NGQIVPSY 10
NGQI+ +Y
Sbjct: 266 NGQIINTY 273
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 NGQIVPSY 10
NGQI+ +Y
Sbjct: 266 NGQIINTY 273
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 3 NGQIVPSY 10
NGQI+ +Y
Sbjct: 266 NGQIINTY 273
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 NGQIVPSY 10
NGQI+ +Y
Sbjct: 266 NGQIINTY 273
>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 3 NGQIVPSY 10
NGQI+ +Y
Sbjct: 266 NGQIINTY 273
>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 3 NGQIVPSY 10
NGQI+ +Y
Sbjct: 266 NGQIINTY 273
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 3 NGQIVPSY 10
NGQI+ +Y
Sbjct: 266 NGQIINTY 273
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 NGQIVPSY 10
NGQI+ +Y
Sbjct: 266 NGQIINTY 273
>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 NGQIVPSY 10
NGQI+ +Y
Sbjct: 266 NGQIINTY 273
>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 NGQIVPSY 10
NGQI+ +Y
Sbjct: 266 NGQIINTY 273
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 ANGQIVPS 9
A+GQ +PS
Sbjct: 627 ASGQAIPS 634
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 NGQIVPSY 10
NG I P Y
Sbjct: 1985 NGMIAPLY 1992
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 RANGQIVP 8
+ NG++VP
Sbjct: 706 KPNGELVP 713
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 RANGQIVP 8
+ NG++VP
Sbjct: 706 KPNGELVP 713
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 ANGQIVPSY 10
A GQ++P Y
Sbjct: 875 AVGQLLPFY 883
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 ANGQIVPSY 10
A GQ++P Y
Sbjct: 875 AVGQLLPFY 883
215|SequenceR|1080|1071|PPAMMRANGQ
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 1 PPAMMRANGQ 10
PP R NG
Sbjct: 239 PPRKRRRNGH 248
216|SequenceR|1085|1076|PQAHTPPAMM
>sp|MATRX_HMPVC|MATRIX protein|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 QAHTPPAMM 10
QA+TPPA++
Sbjct: 40 QANTPPAVL 48
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 2 QAHTPPA 8
Q HTPPA
Sbjct: 429 QKHTPPA 435
>sp|HBEAG_HBVC1|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 PQAHTPP 7
PQA+ PP
Sbjct: 158 PQAYRPP 164
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 1 PQAHTPPA 8
P A PPA
Sbjct: 400 PMAEYPPA 407
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 PQAHTPPA 8
P A PPA
Sbjct: 400 PMAEYPPA 407
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 1 PQAHTPPA 8
P A PPA
Sbjct: 400 PMAEYPPA 407
>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P
Query: 1 PQAHTPPAM 9
PQ PP++
Sbjct: 104 PQCQVPPSL 112
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 PQAHTPPA 8
P+A TP A
Sbjct: 396 PEADTPKA 403
>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 PQAHTPP 7
PQA+ PP
Sbjct: 158 PQAYRPP 164
>sp|CAPSD_HBVC1|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PQAHTPP 7
PQA+ PP
Sbjct: 129 PQAYRPP 135
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 PQAHTP 6
P+A+TP
Sbjct: 1680 PEAYTP 1685
>sp|CAPSD_HBVD7|CAPSID protein|Hepatitis B virus genotype D
Query: 1 PQAHTPP 7
PQA+ PP
Sbjct: 129 PQAYRPP 135
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 PQAHTP 6
P+A+TP
Sbjct: 1680 PEAYTP 1685
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 PQAHTP 6
P+A+TP
Sbjct: 1680 PEAYTP 1685
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 PQAHTPP 7
P AH PP
Sbjct: 78 PAAHRPP 84
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PQAHTPP 7
PQ H PP
Sbjct: 740 PQKHKPP 746
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PQAHTPP 7
PQ H PP
Sbjct: 741 PQKHKPP 747
217|SequenceR|1090|1081|SSVLGPQAHT
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 4 LGPQAHT 10
LGP+AH+
Sbjct: 286 LGPRAHS 292
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 VLGPQAHT 10
V GP AHT
Sbjct: 1041 VRGPWAHT 1048
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 SVLGPQAHT 10
+V+GP A T
Sbjct: 1355 NVVGPDART 1363
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 SVLGPQAHT 10
+V+GP A T
Sbjct: 1355 NVVGPDART 1363
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 SSVLGPQAHT 10
++++ PQ HT
Sbjct: 290 ATIISPQHHT 299
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 SVLGPQAHT 10
+VL P HT
Sbjct: 2205 AVLAPNIHT 2213
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 SVLGPQAHT 10
+VL P HT
Sbjct: 874 AVLAPNIHT 882
218|SequenceR|1095|1086|YQTASSSVLG
>sp|UL24_HHV6Z|PROTEIN UL24 homolog|Human herpesvirus 6B (strain Z29)
Query: 1 YQTASSSVL 9
YQ AS SVL
Sbjct: 209 YQKASKSVL 217
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 YQTASSSVLG 10
Y T S+++LG
Sbjct: 1319 YSTDSTTILG 1328
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 2 QTASSSVL 9
QT+SSS L
Sbjct: 292 QTSSSSAL 299
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YQTASSSVLG 10
Y T S S++G
Sbjct: 317 YTTRSRSIIG 326
219|SequenceR|1100|1091|QEHAGYQTAS
>sp|NS8B_SARS|ORF8B protein|Severe acute respiratory syndrome coronavirus
Query: 3 HAGYQTAS 10
H G+QTA+
Sbjct: 64 HEGHQTAA 71
>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 HAGYQTAS 10
HAGY T +
Sbjct: 109 HAGYYTCN 116
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 QEHAGYQTAS 10
+ H+G +TAS
Sbjct: 435 ETHSGRKTAS 444
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 QEHAGYQTAS 10
+ H+G +TAS
Sbjct: 435 ETHSGRKTAS 444
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 QEHAGYQTAS 10
+ H+G +TAS
Sbjct: 435 ETHSGRKTAS 444
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QEHAGYQTAS 10
H G+QT S
Sbjct: 162 HRHLGWQTLS 171
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QEHAGYQTAS 10
H G+QT S
Sbjct: 162 HRHLGWQTLS 171
220|SequenceR|1105|1096|YMAHTQEHAG
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 MAHTQEHAG 10
M HT EH G
Sbjct: 2122 MLHTSEHGG 2130
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 MAHTQEHAG 10
M HT EH G
Sbjct: 2122 MLHTSEHGG 2130
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 MAHTQEHAG 10
M HT EH G
Sbjct: 2122 MLHTSEHGG 2130
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 MAHTQEHAG 10
M HT EH G
Sbjct: 2122 MLHTSEHGG 2130
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 YMAHTQEHA 9
Y HT+E+A
Sbjct: 483 YAKHTREYA 491
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 YMAHTQEHA 9
Y HT+E+A
Sbjct: 483 YAKHTREYA 491
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 YMAHTQEHA 9
Y HT+E+A
Sbjct: 483 YAKHTREYA 491
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 YMAHTQEHA 9
Y HT+E+A
Sbjct: 483 YAKHTREYA 491
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 YMAHTQEHA 9
Y HT+E+A
Sbjct: 483 YAKHTREYA 491
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 YMAHTQEHA 9
Y HT+E+A
Sbjct: 483 YAKHTREYA 491
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 YMAHTQEHA 9
Y HT+E+A
Sbjct: 483 YAKHTREYA 491
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 YMAHTQEHA 9
Y HT+E+A
Sbjct: 483 YAKHTREYA 491
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 YMAHTQEHA 9
Y HT+E+A
Sbjct: 483 YAKHTREYA 491
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 YMAHTQEHA 9
Y HT+E+A
Sbjct: 483 YAKHTREYA 491
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 YMAHTQEHA 9
Y HT+E+A
Sbjct: 483 YAKHTREYA 491
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 YMAHTQEHA 9
Y HT+E+A
Sbjct: 483 YAKHTREYA 491
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 YMAHTQEHA 9
Y HT+E+A
Sbjct: 483 YAKHTREYA 491
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 1 YMAHTQEHA 9
Y HT+E+A
Sbjct: 483 YAKHTREYA 491
>sp|VL2_HPV70|MINOR capsid protein L2|Human papillomavirus type 70
Query: 2 MAHTQEHAG 10
M HT H G
Sbjct: 359 MLHTTSHTG 367
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 4 HTQEHA 9
HT EHA
Sbjct: 337 HTPEHA 342
>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 4 HTQEHA 9
HT EHA
Sbjct: 337 HTPEHA 342
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 3 AHTQEHAG 10
++TQ+H G
Sbjct: 178 SNTQQHTG 185
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 YMAHTQEHA 9
YM++ Q HA
Sbjct: 1341 YMSNKQTHA 1349
221|SequenceR|1110|1101|LKPCAYMAHT
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 4 CAYMAH 9
CAY+AH
Sbjct: 641 CAYIAH 646
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 LKPCAYMA 8
L PC Y+A
Sbjct: 1713 LNPCDYVA 1720
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 3 PCAYMAHT 10
PC +MA +
Sbjct: 243 PCKFMAES 250
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 3 PCAYMAHT 10
PC Y+A T
Sbjct: 793 PCLYVAAT 800
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 3 PCAYMAHT 10
PC Y+A T
Sbjct: 793 PCLYVAAT 800
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 LKPCAYMAHT 10
+ CAY+A T
Sbjct: 623 FRRCAYIAKT 632
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LKPCAYMAHT 10
+ CAY+A T
Sbjct: 623 FRRCAYIAKT 632
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 PCAYM 7
PC YM
Sbjct: 6345 PCVYM 6349
>sp|GM_HHV6Z|ENVELOPE glycoprotein M|Human herpesvirus 6B (strain Z29)
Query: 3 PCAY 6
PCAY
Sbjct: 43 PCAY 46
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 1 LKPCAYM 7
+KPC ++
Sbjct: 241 IKPCPFL 247
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 LKPCAYM 7
++ CAYM
Sbjct: 359 VRECAYM 365
>sp|GM_HHV6U|ENVELOPE glycoprotein M|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PCAY 6
PCAY
Sbjct: 43 PCAY 46
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 3 PCAY 6
PCAY
Sbjct: 421 PCAY 424
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 2 KPCAYMA 8
K CAY++
Sbjct: 656 KKCAYLS 662
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 2 KPCAYMA 8
K CAY++
Sbjct: 656 KKCAYLS 662
>sp|ORF3_TTVG1|UNCHARACTERIZED ORF3 protein|Torque teno midi virus 1
Query: 2 KPCAYMAHT 10
KPC Y T
Sbjct: 11 KPCRYNCET 19
222|SequenceR|1115|1106|EKNYPLKPCA
>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P
Query: 1 EKNYPLKPC 9
E +YP PC
Sbjct: 73 EMHYPFSPC 81
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 1 EKNYPLKPC 9
+K P+KPC
Sbjct: 115 KKTTPMKPC 123
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 1 EKNYPLKPC 9
+K P+KPC
Sbjct: 225 KKTTPMKPC 233
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 1 EKNYPLKPC 9
+K P+KPC
Sbjct: 236 KKTTPMKPC 244
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 NYPLKPCA 10
+YP KPC
Sbjct: 490 HYPPKPCG 497
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 NYPLKPCA 10
+YP KPC
Sbjct: 488 HYPPKPCG 495
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 NYPLKPCA 10
+YP KPC
Sbjct: 488 HYPPKPCG 495
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 3 NYPLKPCA 10
+YP KPC
Sbjct: 490 HYPPKPCG 497
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 3 NYPLKPCA 10
+YP KPC
Sbjct: 488 HYPPKPCG 495
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 NYPLKPCA 10
+YP KPC
Sbjct: 490 HYPPKPCG 497
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 KNYPLKP 8
K YP KP
Sbjct: 137 KEYPFKP 143
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 3 NYPLKPCA 10
+YP KPC
Sbjct: 490 HYPPKPCG 497
>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1
Query: 1 EKNYPLKPC 9
+K P+KPC
Sbjct: 118 KKTTPMKPC 126
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 4 YPLKPCA 10
+PLKP A
Sbjct: 1727 FPLKPTA 1733
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 4 YPLKPCA 10
+PLKP A
Sbjct: 1726 FPLKPTA 1732
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 NYPLKP 8
NYP KP
Sbjct: 1649 NYPTKP 1654
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 NYPLKPCA 10
+YP +PC
Sbjct: 490 HYPPRPCG 497
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 2 KNYPLKPC 9
KN+P K C
Sbjct: 424 KNFPKKNC 431
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 NYPLKPCA 10
+YP +PC
Sbjct: 490 HYPPRPCG 497
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 EKNYP 5
EKNYP
Sbjct: 2159 EKNYP 2163
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 EKNYP 5
EKNYP
Sbjct: 2159 EKNYP 2163
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 EKNYP 5
EKNYP
Sbjct: 2159 EKNYP 2163
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 EKNYP 5
EKNYP
Sbjct: 2159 EKNYP 2163
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 EKNYP 5
EKNYP
Sbjct: 2159 EKNYP 2163
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 NYPLKPCA 10
+YP +PC
Sbjct: 488 HYPPRPCG 495
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 NYPLKPC 9
+YP +PC
Sbjct: 488 HYPPRPC 494
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 NYPLKPCA 10
+YP +PC
Sbjct: 490 HYPPRPCG 497
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 NYPLKPC 9
+YP +PC
Sbjct: 490 HYPPRPC 496
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 NYPLKPC 9
+YP +PC
Sbjct: 488 HYPPRPC 494
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 NYPLKPCA 10
+YP +PC
Sbjct: 489 HYPPRPCG 496
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 NYPLKPCA 10
+YP +PC
Sbjct: 489 HYPPRPCG 496
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 KNYPLKP 8
KN PL+P
Sbjct: 89 KNVPLEP 95
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 KNYPLKP 8
KN PL+P
Sbjct: 89 KNAPLEP 95
>sp|PHOSP_HRSV1|PHOSPHOPROTEIN respiratory syncytial virus B
Query: 1 EKNYPLKP 8
+ NYP KP
Sbjct: 76 KANYPRKP 83
>sp|PHOSP_HRSVB|PHOSPHOPROTEIN respiratory syncytial virus B
Query: 1 EKNYPLKP 8
+ NYP KP
Sbjct: 76 KANYPRKP 83
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 KNYPLKP 8
KNY KP
Sbjct: 1604 KNYQTKP 1610
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 5 PLKPC 9
PL+PC
Sbjct: 716 PLEPC 720
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 1 EKNYPLKP 8
E N P KP
Sbjct: 86 EDNVPAKP 93
>sp|VE6_HPV44|PROTEIN E6|Human papillomavirus 44
Query: 3 NYPLKPCA 10
N+P CA
Sbjct: 58 NFPFAACA 65
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 NYPLKP 8
N+P KP
Sbjct: 1687 NFPTKP 1692
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 EKNYPLKPC 9
+KN+ +K C
Sbjct: 544 QKNFTMKLC 552
223|SequenceR|1120|1111|FSPSTEKNYP
>sp|NS6_SARS|ORF6 protein|Severe acute respiratory syndrome coronavirus
Query: 1 FSPSTEKNY 9
F P T+KNY
Sbjct: 41 FKPLTKKNY 49
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 FSPSTEKNY 9
F+P++EK Y
Sbjct: 486 FAPTSEKRY 494
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 FSPSTEKNY 9
F+P+ EK Y
Sbjct: 494 FAPTKEKRY 502
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 FSPSTEKNY 9
+ PST KN+
Sbjct: 820 YHPSTPKNF 828
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 FSPSTEKNY 9
F+P+ EK Y
Sbjct: 486 FAPTAEKRY 494
>sp|PG089_MONPV|PUTATIVE nuclease OPG089|Monkeypox virus (MPXV)
Query: 1 FSPSTEKNY 9
F PS E NY
Sbjct: 221 FVPSAEDNY 229
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 FSPSTEKNY 9
F+P+ EK Y
Sbjct: 484 FAPTKEKRY 492
>sp|PG089_VARV|PUTATIVE nuclease OPG089|Variola virus
Query: 1 FSPSTEKNY 9
F PS E NY
Sbjct: 221 FVPSAEDNY 229
>sp|PG089_VAR67|PUTATIVE nuclease OPG089|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 FSPSTEKNY 9
F PS E NY
Sbjct: 221 FVPSAEDNY 229
>sp|PG089_VACCC|PUTATIVE nuclease OPG089|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FSPSTEKNY 9
F PS E NY
Sbjct: 221 FVPSAEDNY 229
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 1 FSPSTEK 7
F+PSTEK
Sbjct: 92 FNPSTEK 98
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 FSPSTEKNY 9
SPS EK++
Sbjct: 463 LSPSAEKSF 471
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 FSPSTEKNYP 10
F+PS ++YP
Sbjct: 2066 FNPSKLRSYP 2075
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 FSPSTEKNYP 10
F+PS ++YP
Sbjct: 2066 FNPSKLRSYP 2075
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 FSPSTEKNYP 10
F+PS ++YP
Sbjct: 2067 FNPSKLRSYP 2076
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 2 SPSTEKNYP 10
SPSTEK P
Sbjct: 443 SPSTEKEDP 451
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 FSPSTEKNYP 10
F+PS ++YP
Sbjct: 2027 FNPSKLRSYP 2036
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 FSPSTEKNYP 10
+ P TE +YP
Sbjct: 1603 YIPETEDDYP 1612
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 FSPSTEKNYP 10
+ P TE +YP
Sbjct: 1603 YIPETEDDYP 1612
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 FSPSTEKNYP 10
F+PS ++YP
Sbjct: 2027 FNPSKLRSYP 2036
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 FSPSTEKNYP 10
FSPS +++P
Sbjct: 1964 FSPSRLRSFP 1973
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 FSPSTEKNY 9
F+P+++K Y
Sbjct: 495 FAPTSQKRY 503
>sp|PHOSP_HRSVB|PHOSPHOPROTEIN respiratory syncytial virus B
Query: 2 SPSTEKNYP 10
+P T+ NYP
Sbjct: 72 TPETKANYP 80
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 FSPSTEKNY 9
F+P+ EK Y
Sbjct: 485 FAPTREKRY 493
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 1 FSPSTEKN 8
+PSTEK+
Sbjct: 467 LTPSTEKS 474
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FSPSTEKN 8
F P EKN
Sbjct: 1983 FGPEREKN 1990
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 FSPSTEK 7
F PSTE+
Sbjct: 474 FQPSTEQ 480
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 FSPSTEKNY 9
+PST K Y
Sbjct: 835 LTPSTNKEY 843
224|SequenceR|1125|1116|SIAFYFSPST
>sp|US11_HCMVM|MEMBRANE glycoprotein US11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 IAFYFSP 8
+ FYFSP
Sbjct: 125 VLFYFSP 131
>sp|US11_HCMVT|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 2 IAFYFSP 8
+ FYFSP
Sbjct: 125 VLFYFSP 131
>sp|US11_HCMVA|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 IAFYFSP 8
+ FYFSP
Sbjct: 125 VLFYFSP 131
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 SIAFYFSPST 10
+I FY SP T
Sbjct: 158 TIKFYRSPDT 167
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 IAFYFSPS 9
+ FY SP+
Sbjct: 116 VVFYLSPT 123
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 1 SIAFYFSPST 10
SIA ++SP+T
Sbjct: 316 SIASFWSPTT 325
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 2 IAFYFSPS 9
+ FY SP+
Sbjct: 116 VIFYLSPT 123
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 IAFYFS 7
+AFYFS
Sbjct: 749 LAFYFS 754
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 IAFYFS 7
+AFYFS
Sbjct: 746 LAFYFS 751
225|SequenceR|1130|1121|ALSGTSIAFY
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 ALSGTSIAF 9
AL+GTSI F
Sbjct: 987 ALAGTSIGF 995
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 ALSGTSIAF 9
AL+GTSI F
Sbjct: 987 ALAGTSIGF 995
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 ALSGTSIAF 9
AL+GTS+ F
Sbjct: 987 ALAGTSVGF 995
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 ALSGTSIAFY 10
A+ TS+ FY
Sbjct: 1512 AMPKTSLCFY 1521
226|SequenceR|1135|1126|HAYQQALSGT
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 HAYQQA 6
HAYQQA
Sbjct: 710 HAYQQA 715
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 HAYQQA 6
HAYQQA
Sbjct: 709 HAYQQA 714
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 HAYQQA 6
HAYQQA
Sbjct: 709 HAYQQA 714
>sp|VE7_HPV5B|PROTEIN E7|Human papillomavirus type 5b
Query: 2 AYQQALSG 9
A+QQ L+G
Sbjct: 78 AFQQLLTG 85
>sp|VE7_HPV36|PROTEIN E7|Human papillomavirus 36
Query: 2 AYQQALSG 9
A+QQ L+G
Sbjct: 77 AFQQLLTG 84
>sp|VE7_HPV05|PROTEIN E7|Human papillomavirus 5
Query: 2 AYQQALSG 9
A+QQ L+G
Sbjct: 78 AFQQLLTG 85
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 HAYQQALSG 9
HA+ LSG
Sbjct: 409 HAFSSLLSG 417
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 1 HAYQQALSG 9
HA+ LSG
Sbjct: 409 HAFSSLLSG 417
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 HAYQQALSG 9
HA+ LSG
Sbjct: 409 HAFSSLLSG 417
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HAYQQALSG 9
HA+ LSG
Sbjct: 409 HAFSSLLSG 417
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HAYQQALSG 9
HA+ LSG
Sbjct: 401 HAFSSLLSG 409
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 1 HAYQQALSG 9
HA+ LSG
Sbjct: 409 HAFSSLLSG 417
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 HAYQQALSG 9
HA+ LSG
Sbjct: 409 HAFSSLLSG 417
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 HAYQQALSG 9
HA+ LSG
Sbjct: 409 HAFSSLLSG 417
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 HAYQQALSG 9
HA+ LSG
Sbjct: 409 HAFSSLLSG 417
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 HAYQQAL 7
HA QQAL
Sbjct: 875 HAIQQAL 881
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 3 YQQALSGT 10
Y+Q SGT
Sbjct: 443 YEQGWSGT 450
227|SequenceR|1140|1131|LTANPHAYQQ
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 1 LTANPHAYQQ 10
L A PH Y++
Sbjct: 299 LGAEPHPYEE 308
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 2 TANPHAYQQ 10
T NP++Y+Q
Sbjct: 130 TENPNSYRQ 138
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 2 TANPH 6
TANPH
Sbjct: 516 TANPH 520
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 LTANPHAYQQ 10
L A PH Y++
Sbjct: 633 LGAEPHPYEE 642
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 2 TANPHA 7
T NPH+
Sbjct: 308 TGNPHS 313
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 TANPHA 7
T NPH+
Sbjct: 308 TGNPHS 313
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TANPHA 7
T NPH+
Sbjct: 308 TGNPHS 313
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 2 TANPHA 7
T NPH+
Sbjct: 308 TGNPHS 313
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 PHAYQQ 10
PH YQ+
Sbjct: 220 PHRYQR 225
>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PHAYQQ 10
PH YQ+
Sbjct: 220 PHRYQR 225
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 4 NPHAY 8
+PHAY
Sbjct: 168 SPHAY 172
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 NPHAY 8
+PHAY
Sbjct: 168 SPHAY 172
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 4 NPHAY 8
+PHAY
Sbjct: 168 SPHAY 172
>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)
Query: 4 NPHAY 8
+PHAY
Sbjct: 170 SPHAY 174
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 LTANPHAYQ 9
+ +N H+YQ
Sbjct: 2049 VASNGHSYQ 2057
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 LTANPHAYQ 9
+ ANP YQ
Sbjct: 129 IRANPVTYQ 137
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 4 NPHAYQQ 10
+P AYQQ
Sbjct: 229 SPQAYQQ 235
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 4 NPHAYQQ 10
+P AYQQ
Sbjct: 228 SPQAYQQ 234
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 4 NPHAYQQ 10
+P AYQQ
Sbjct: 229 SPQAYQQ 235
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 4 NPHAYQQ 10
+P AYQQ
Sbjct: 229 SPQAYQQ 235
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 4 NPHAYQQ 10
+P AYQQ
Sbjct: 229 SPQAYQQ 235
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 4 NPHAYQQ 10
+P AYQQ
Sbjct: 229 SPQAYQQ 235
>sp|VL2_HPV42|MINOR capsid protein L2|Human papillomavirus 42
Query: 2 TANPHAYQQ 10
T PH+Y++
Sbjct: 190 TITPHSYEE 198
228|SequenceR|1145|1136|PTHPHLTANP
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 1 PTHPHLTANP 10
PTHPH+ A P
Sbjct: 400 PTHPHVGAPP 409
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 1 PTHPHLTANP 10
PTHPH+ A P
Sbjct: 402 PTHPHVGAPP 411
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PTHPHLTA 8
P+HP LTA
Sbjct: 45 PSHPLLTA 52
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PTHPHLTA 8
P+HP LTA
Sbjct: 45 PSHPLLTA 52
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PTHPHLTA 8
P+HP LTA
Sbjct: 45 PSHPLLTA 52
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 2 THPHLTAN 9
T PH+T+N
Sbjct: 933 TEPHITSN 940
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 THPHLTAN 9
T PH+T+N
Sbjct: 933 TEPHITSN 940
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 4 PHLTANP 10
PHL ANP
Sbjct: 418 PHLAANP 424
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PHLTANP 10
PHL ANP
Sbjct: 418 PHLAANP 424
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 THPHLTAN 9
T PH+T N
Sbjct: 934 TEPHITTN 941
>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)
Query: 1 PTHPHLT 7
P HP+L+
Sbjct: 22 PNHPYLS 28
>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PTHPHLT 7
P HP+L+
Sbjct: 22 PNHPYLS 28
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 PTHPH 5
PTHPH
Sbjct: 1349 PTHPH 1353
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 PTHPH 5
PTHPH
Sbjct: 1350 PTHPH 1354
>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 THPHLTANP 10
+HPH TA P
Sbjct: 243 SHPHATARP 251
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 1 PTHPHLT 7
P HP+L+
Sbjct: 22 PNHPYLS 28
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 PTHPH 5
PTHPH
Sbjct: 1349 PTHPH 1353
>sp|TRX2_HHV7M|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain MUK)
Query: 1 PTHPHLTAN 9
P+H HL N
Sbjct: 31 PSHRHLIGN 39
>sp|TRX2_HHV7J|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain JI)
Query: 1 PTHPHLTAN 9
P+H HL N
Sbjct: 31 PSHRHLIGN 39
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 THPHLTAN 9
T PH+T N
Sbjct: 932 TEPHITTN 939
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 PTHPH 5
PT+PH
Sbjct: 1116 PTYPH 1120
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 PTHPH 5
PT+PH
Sbjct: 1116 PTYPH 1120
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 PTHPH 5
PT+PH
Sbjct: 1116 PTYPH 1120
>sp|VP24_EBOZ5|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 PHLTANP 10
PHL NP
Sbjct: 77 PHLFQNP 83
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 1 PTHPHL 6
PTH HL
Sbjct: 456 PTHRHL 461
>sp|VP24_EBOZM|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 PHLTANP 10
PHL NP
Sbjct: 77 PHLFQNP 83
>sp|VP24_EBOG4|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 4 PHLTANP 10
PHL NP
Sbjct: 77 PHLFQNP 83
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 4 PHLTAN 9
PH T+N
Sbjct: 662 PHFTSN 667
>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)
Query: 1 PTHPHLTANP 10
PTH HL +P
Sbjct: 151 PTHTHLRQDP 160
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain
Query: 3 HPHLT 7
HPH+T
Sbjct: 39 HPHVT 43
>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)
Query: 2 THPHLTAN 9
T PH++A+
Sbjct: 124 TEPHISAS 131
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 3 HPHL 6
HPHL
Sbjct: 216 HPHL 219
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 3 HPHL 6
HPHL
Sbjct: 216 HPHL 219
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 THPHLTANP 10
T+P LTA P
Sbjct: 1672 TNPKLTAFP 1680
>sp|VP24_EBORR|MEMBRANE-ASSOCIATED protein VP24|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 PHLTANP 10
PHL NP
Sbjct: 77 PHLFQNP 83
>sp|VP24_EBORE|MEMBRANE-ASSOCIATED protein VP24|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 PHLTANP 10
PHL NP
Sbjct: 77 PHLFQNP 83
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 2 THPHLT 7
THPH +
Sbjct: 428 THPHYS 433
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 2 THPHLT 7
THPH +
Sbjct: 428 THPHYS 433
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 2 THPHLT 7
THPH +
Sbjct: 428 THPHYS 433
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 2 THPHLT 7
THPH +
Sbjct: 428 THPHYS 433
>sp|GP_PUUMU|ENVELOPE glycoprotein|Puumala virus (strain Udmurtia/894CG/91)
Query: 2 THPHLTAN 9
T PH++A+
Sbjct: 27 TEPHISAS 34
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 THPHLT 7
THPH +
Sbjct: 428 THPHYS 433
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 THPHLT 7
THPH +
Sbjct: 420 THPHYS 425
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 2 THPHLT 7
THPH +
Sbjct: 428 THPHYS 433
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 2 THPHLT 7
THPH +
Sbjct: 428 THPHYS 433
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 THPHLT 7
THPH +
Sbjct: 428 THPHYS 433
>sp|VEGFH_ORFN2|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ2) (OV
Query: 2 THPHLTA 8
THP LT+
Sbjct: 48 THPELTS 54
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PTHPH 5
PT PH
Sbjct: 900 PTEPH 904
>sp|LRP1_HHV1F|LATENCY-RELATED protein 1|Human herpesvirus 1 (strain F)
Query: 1 PTHPHLTANP 10
PTHPH A P
Sbjct: 29 PTHPHSHAPP 38
Query: 1 PTHPHLTANP 10
PTHPH A P
Sbjct: 61 PTHPHSHAPP 70
Query: 1 PTHPHLTANP 10
P+HPH A P
Sbjct: 45 PSHPHSRAPP 54
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 3 HPHLTAN 9
HPHL+ +
Sbjct: 613 HPHLSPD 619
>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)
Query: 1 PTHPHLTANP 10
PTH HL +P
Sbjct: 142 PTHTHLRHDP 151
229|SequenceR|1150|1141|SPQPHPTHPH
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 PQPHPTHPH 10
PQ HP H H
Sbjct: 406 PQDHPFHEH 414
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PQPHPTHPH 10
P P PT PH
Sbjct: 586 PTPKPTMPH 594
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PQPHPTHPH 10
P P PT PH
Sbjct: 586 PTPKPTMPH 594
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SPQPHPT 7
SPQ HPT
Sbjct: 481 SPQKHPT 487
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SPQPHPT 7
SPQ HPT
Sbjct: 481 SPQKHPT 487
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SPQPHPTHP 9
SP P PT P
Sbjct: 635 SPWPEPTFP 643
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 6 PTHPH 10
PT+PH
Sbjct: 1116 PTYPH 1120
Query: 5 HPTH 8
HPTH
Sbjct: 1632 HPTH 1635
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 6 PTHPH 10
PT+PH
Sbjct: 1116 PTYPH 1120
Query: 5 HPTH 8
HPTH
Sbjct: 1632 HPTH 1635
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 6 PTHPH 10
PT+PH
Sbjct: 1116 PTYPH 1120
Query: 5 HPTH 8
HPTH
Sbjct: 1632 HPTH 1635
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 1 SPQPHPTHP 9
S QP T+P
Sbjct: 518 SSQPFATYP 526
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 PQPH 5
PQPH
Sbjct: 2799 PQPH 2802
>sp|GQ2_HHV6U|GLYCOPROTEIN Q2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SPQPHPTHP 9
SP P PT P
Sbjct: 193 SPWPEPTFP 201
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 3 QPHPTHPH 10
+PH H H
Sbjct: 1346 EPHKVHVH 1353
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 3 QPHPTHPH 10
+PHP PH
Sbjct: 299 KPHPNMPH 306
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 SPQPHPTHPH 10
SP P+PT H
Sbjct: 418 SPTPNPTTQH 427
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PQPHPTHP 9
P+P PTHP
Sbjct: 443 PEPPPTHP 450
>sp|LRP1_HHV1F|LATENCY-RELATED protein 1|Human herpesvirus 1 (strain F)
Query: 4 PHPTHPH 10
P PTHPH
Sbjct: 27 PTPTHPH 33
Query: 4 PHPTHPH 10
P PTHPH
Sbjct: 59 PTPTHPH 65
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 6 PTHPH 10
PTHPH
Sbjct: 1350 PTHPH 1354
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 6 PTHPH 10
PTHPH
Sbjct: 1349 PTHPH 1353
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 6 PTHPH 10
PTHPH
Sbjct: 1349 PTHPH 1353
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 5 HPTHPH 10
PTHPH
Sbjct: 401 EPTHPH 406
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 5 HPTHPH 10
PTHPH
Sbjct: 399 EPTHPH 404
230|SequenceR|1155|1146|GTPTASPQPH
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GTPTASPQPH 10
G P A+P+ H
Sbjct: 310 GRPNAAPETH 319
>sp|VP7_ROTHV|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 3 PTASPQ 8
PT SPQ
Sbjct: 275 PTTSPQ 280
>sp|VP7_ROTHT|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 3 PTASPQ 8
PT SPQ
Sbjct: 275 PTTSPQ 280
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 PTASPQPH 10
PT PQ H
Sbjct: 5539 PTLVPQEH 5546
Query: 3 PTASPQ 8
P ASPQ
Sbjct: 305 PVASPQ 310
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 PTASPQPH 10
PT PQ H
Sbjct: 5562 PTLVPQEH 5569
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 PTASPQ 8
P ASPQ
Sbjct: 305 PVASPQ 310
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 2 TPTASPQPH 10
PTA PQ H
Sbjct: 276 VPTAFPQDH 284
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 TPTASPQPH 10
PTA PQ H
Sbjct: 276 VPTAFPQDH 284
>sp|VP24_EBOSU|MEMBRANE-ASSOCIATED protein VP24|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 PTASPQP 9
P A+P+P
Sbjct: 229 PVATPKP 235
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 1 GTPTASPQPH 10
G+P SP H
Sbjct: 88 GSPYVSPLGH 97
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 TPTASPQPH 10
+P ASP PH
Sbjct: 473 SPPASPTPH 481
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 2 TPTASPQP 9
TP +PQP
Sbjct: 329 TPAVTPQP 336
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 TPTASPQP 9
TP +PQP
Sbjct: 329 TPAVTPQP 336
>sp|E3B14_ADE05|EARLY E3B 14.6 kDa protein|Human adenovirus C serotype 5
Query: 2 TPTASPQPH 10
+PT+ PQ H
Sbjct: 19 SPTSKPQRH 27
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 2 TPTASPQPH 10
TPT++P P+
Sbjct: 61 TPTSTPNPN 69
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 2 TPTASPQPH 10
TPT++P P+
Sbjct: 61 TPTSTPNPN 69
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GTPTASPQP 9
G+P SP P
Sbjct: 418 GSPGDSPPP 426
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GTPTASPQP 9
G+P SP P
Sbjct: 418 GSPGDSPPP 426
231|SequenceR|1160|1151|QSQQQGTPTA
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 QSQQQGTPT 9
++Q+QG PT
Sbjct: 328 EAQRQGLPT 336
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 QSQQQGTPT 9
+++ +GTPT
Sbjct: 18 EAEPRGTPT 26
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 QSQQQGTPT 9
+++ +GTPT
Sbjct: 18 EAEPRGTPT 26
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 QSQQQGTPT 9
+++ +GTPT
Sbjct: 18 EAEPRGTPT 26
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 QSQQQGTPT 9
+++ +GTPT
Sbjct: 18 EAEPRGTPT 26
>sp|TAT_HV1JR|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 SQQQGTPTA 10
SQQ+G PT
Sbjct: 75 SQQRGDPTG 83
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QSQQQGTP 8
+S+Q GTP
Sbjct: 214 RSEQNGTP 221
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 QSQQQGTPT 9
+ + +GTPT
Sbjct: 18 EDEPRGTPT 26
232|SequenceR|1165|1156|HSGGHQSQQQ
>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51
Query: 1 HSGGHQSQQQ 10
++GGHQS Q
Sbjct: 271 NTGGHQSATQ 280
>sp|VE8E2_HPV51|PROTEIN E8^E2C|Human papillomavirus 51
Query: 1 HSGGHQSQQQ 10
++GGHQS Q
Sbjct: 85 NTGGHQSATQ 94
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 3 GGHQSQ 8
GGH+SQ
Sbjct: 979 GGHESQ 984
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HSGGHQSQQ 9
H GGH QQ
Sbjct: 542 HVGGHIVQQ 550
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 2 SGGHQSQQQ 10
SGG+ SQQ+
Sbjct: 392 SGGNTSQQK 400
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 SGGHQSQQ 9
SGGH+++Q
Sbjct: 445 SGGHEARQ 452
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 SGGHQSQQ 9
SGGH+++Q
Sbjct: 443 SGGHEARQ 450
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HSGGHQSQQ 9
H GGH QQ
Sbjct: 542 HVGGHIVQQ 550
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 1 HSGGH 5
H+GGH
Sbjct: 282 HAGGH 286
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 1 HSGGH 5
H+GGH
Sbjct: 282 HAGGH 286
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 1 HSGGH 5
H+GGH
Sbjct: 282 HAGGH 286
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 1 HSGGH 5
H+GGH
Sbjct: 282 HAGGH 286
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 1 HSGGH 5
H+GGH
Sbjct: 282 HAGGH 286
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HSGGHQSQQQ 10
H+G +Q QQQ
Sbjct: 555 HAGSNQQQQQ 564
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HSGGHQSQQQ 10
H+G +Q QQQ
Sbjct: 555 HAGSNQQQQQ 564
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 2 SGGHQSQQQ 10
SGG+ SQQ+
Sbjct: 392 SGGNTSQQR 400
233|SequenceR|1170|1161|PSPAPHSGGH
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 1 PSPAPHSGGH 10
P P PH H
Sbjct: 461 PCPKPHRLNH 470
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 1 PSPAPHSG 8
PSPAP G
Sbjct: 177 PSPAPQQG 184
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 3 PAPHSGGH 10
P+P+ GH
Sbjct: 608 PSPYGNGH 615
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 PSPAPHS 7
P+PAP +
Sbjct: 758 PTPAPRT 764
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 4 APHSGG 9
APHSGG
Sbjct: 725 APHSGG 730
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 PSPAPHS 7
P+PAP +
Sbjct: 758 PTPAPRT 764
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 1 PSPAPHS 7
P PAPHS
Sbjct: 97 PQPAPHS 103
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 1 PSPAPHS 7
P PAPHS
Sbjct: 97 PQPAPHS 103
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 PSPAPHS 7
P+PAP +
Sbjct: 759 PTPAPRT 765
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 1 PSPAPH 6
P P PH
Sbjct: 457 PCPLPH 462
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 1 PSPAPH 6
P P PH
Sbjct: 453 PCPLPH 458
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 SPAPHSGGH 10
SPAP GG
Sbjct: 2369 SPAPSCGGE 2377
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 1 PSPAPH 6
P P PH
Sbjct: 448 PCPLPH 453
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 PSPAPHS 7
P+PAP +
Sbjct: 758 PTPAPRT 764
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 PSPAPHS 7
P+PAP +
Sbjct: 758 PTPAPRT 764
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 PSPAPHS 7
P+PAP +
Sbjct: 759 PTPAPRT 765
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 PSPAPHSGGH 10
P P GGH
Sbjct: 190 PKPIVTHGGH 199
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 1 PSPAPHSGG 9
P A H GG
Sbjct: 150 PGDAQHEGG 158
>sp|VE4_HPV2A|PROTEIN E4|Human papillomavirus type 2a
Query: 1 PSPAPHSGGH 10
P PAP + H
Sbjct: 7 PRPAPRTTNH 16
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 PSPAPHSG 8
P+PAP +
Sbjct: 1771 PTPAPRTA 1778
>sp|NS1_I82A8|NON-STRUCTURAL protein 1|Influenza A virus (strain
Query: 2 SPAPHSGGH 10
SP P GH
Sbjct: 161 SPIPSMPGH 169
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 PSPAPHSGG 9
PSPA GG
Sbjct: 1122 PSPADPPGG 1130
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 PSPAPHSGG 9
PSPA GG
Sbjct: 1122 PSPADPPGG 1130
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 APHSGG 9
A HSGG
Sbjct: 358 AKHSGG 363
>sp|GQ2_HHV6Z|GLYCOPROTEIN Q2|Human herpesvirus 6B (strain Z29)
Query: 3 PAPHSGGH 10
P+P+ GH
Sbjct: 174 PSPYGNGH 181
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 4 APHSGGH 10
APH GG
Sbjct: 2576 APHKGGR 2582
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 PSPAPHS 7
PSP P+S
Sbjct: 417 PSPTPNS 423
>sp|NP04_VZVO|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PSPAPH 6
P+P PH
Sbjct: 200 PTPTPH 205
>sp|NP04_VZVD|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PSPAPH 6
P+P PH
Sbjct: 200 PTPTPH 205
234|SequenceR|1175|1166|QHHQVPSPAP
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 QHHQVPSPAP 10
QHHQVP P P
Sbjct: 500 QHHQVPLPNP 509
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 QHHQVPSPAP 10
QHHQVP P P
Sbjct: 500 QHHQVPLPNP 509
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 QVPSPAP 10
Q+PSPAP
Sbjct: 280 QLPSPAP 286
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 QHHQVPSPAP 10
Q H +P P P
Sbjct: 501 QRHHIPMPNP 510
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 QHHQVPSPAP 10
Q H +P P P
Sbjct: 211 QQHPIPGPLP 220
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 VPSPAP 10
VPSP P
Sbjct: 1482 VPSPPP 1487
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 VPSPAP 10
VPSP P
Sbjct: 1482 VPSPPP 1487
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 VPSPAP 10
VPSP P
Sbjct: 1482 VPSPPP 1487
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 5 VPSPAP 10
VPSP P
Sbjct: 1482 VPSPPP 1487
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 VPSPAP 10
VPSP P
Sbjct: 1482 VPSPPP 1487
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 VPSPAP 10
VPSP P
Sbjct: 1482 VPSPPP 1487
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 VPSPAP 10
VPSP P
Sbjct: 1482 VPSPPP 1487
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 3 HQVPSPAP 10
HQ P P P
Sbjct: 354 HQKPPPLP 361
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 VPSPAP 10
VPSP P
Sbjct: 1072 VPSPPP 1077
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 1 QHHQVPSPAP 10
Q VP+P P
Sbjct: 219 QQSFVPNPGP 228
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 1 QHHQVPSPAP 10
Q VP+P P
Sbjct: 219 QQSFVPNPGP 228
>sp|VE4_HPV31|PROTEIN E4|Human papillomavirus 31
Query: 3 HQVPSPAP 10
H++P PAP
Sbjct: 27 HRIPKPAP 34
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 1 QHHQVPSPA 9
Q H++P P+
Sbjct: 16 QTHRLPPPS 24
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 1 QHHQVPSPAP 10
Q PSPAP
Sbjct: 317 QDRPTPSPAP 326
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 1 QHHQVPSPAP 10
+H VP P P
Sbjct: 529 EHRDVPGPRP 538
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 1 QHHQVPSPAP 10
+H VP P P
Sbjct: 529 EHRDVPGPRP 538
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 QHHQVPSPAP 10
Q H P P P
Sbjct: 211 QQHPSPGPMP 220
>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P
Query: 1 QHHQVPSPAP 10
Q VPSP P
Sbjct: 245 QPRSVPSPTP 254
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 HQVPSPAP 10
H++P P P
Sbjct: 317 HKIPYPNP 324
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 HQVPSPAP 10
H++P P P
Sbjct: 317 HKIPYPNP 324
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 HQVPSPAP 10
H++P P P
Sbjct: 317 HKIPYPNP 324
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 QHHQVPSPAP 10
Q H P P P
Sbjct: 211 QQHPSPGPMP 220
>sp|PG130_VARV|39KDA core protein OPG130|Variola virus
Query: 4 QVPSPAP 10
QVP+PAP
Sbjct: 82 QVPTPAP 88
>sp|PG130_VAR67|39KDA core protein OPG130|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 QVPSPAP 10
QVP+PAP
Sbjct: 82 QVPTPAP 88
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 2 HHQVPSPA 9
H+Q+ +PA
Sbjct: 212 HNQITNPA 219
>sp|VE4_HPV18|PROTEIN E4|Human papillomavirus type 18
Query: 3 HQVPSPAP 10
H++P+P P
Sbjct: 26 HRIPAPCP 33
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 2 HHQVPS 7
HH VP+
Sbjct: 17 HHAVPN 22
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 HHQVPS 7
HH VP+
Sbjct: 17 HHAVPN 22
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 2 HHQVPS 7
HH VP+
Sbjct: 17 HHAVPN 22
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 HHQVPS 7
HH VP+
Sbjct: 17 HHAVPN 22
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 2 HHQVPS 7
HH VP+
Sbjct: 34 HHAVPN 39
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 HHQVPS 7
HH VP+
Sbjct: 17 HHAVPN 22
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 2 HHQVPS 7
HH VP+
Sbjct: 33 HHAVPN 38
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 2 HHQVPSPA 9
H+Q+ +PA
Sbjct: 208 HNQITNPA 215
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 2 HHQVPSPA 9
H+Q+ +PA
Sbjct: 212 HNQITNPA 219
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 2 HHQVPSPA 9
H+Q+ +PA
Sbjct: 212 HNQITNPA 219
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 1 QHHQ---VPSPAP 10
QH Q PSPAP
Sbjct: 445 QHEQDRPTPSPAP 457
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 1 QHHQ---VPSPAP 10
QH Q PSPAP
Sbjct: 444 QHEQDRPTPSPAP 456
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 QHHQ---VPSPAP 10
QH Q PSPAP
Sbjct: 446 QHEQDRPTPSPAP 458
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 QHHQ---VPSPAP 10
QH Q PSPAP
Sbjct: 446 QHEQDRPTPSPAP 458
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 QHHQ---VPSPAP 10
QH Q PSPAP
Sbjct: 446 QHEQDRPTPSPAP 458
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 QHHQ---VPSPAP 10
QH Q PSPAP
Sbjct: 446 QHEQDRPTPSPAP 458
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 QHHQ---VPSPAP 10
QH Q PSPAP
Sbjct: 446 QHEQDRPTPSPAP 458
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 QHHQ---VPSPAP 10
QH Q PSPAP
Sbjct: 446 QHEQDRPTPSPAP 458
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 QHHQ---VPSPAP 10
QH Q PSPAP
Sbjct: 446 QHEQDRPTPSPAP 458
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 2 HHQVPSPA 9
HH PSPA
Sbjct: 305 HHISPSPA 312
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 QHHQVPSPAP 10
Q H +P P P
Sbjct: 211 QQHPIPGPLP 220
>sp|VE5_HPV5B|PROBABLE protein E5|Human papillomavirus type 5b
Query: 2 HHQVP 6
HHQVP
Sbjct: 64 HHQVP 68
235|SequenceR|1180|1171|QAAQHQHHQV
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 4 QHQHHQV 10
+HQHHQV
Sbjct: 498 RHQHHQV 504
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 4 QHQHHQV 10
+HQHHQV
Sbjct: 498 RHQHHQV 504
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 QAAQHQHHQV 10
+ A HQ HQV
Sbjct: 1703 EDAPHQVHQV 1712
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 AQHQHHQV 10
A+H HH +
Sbjct: 112 ARHAHHTL 119
236|SequenceR|1185|1176|ALHLAQAAQH
***** No hits found ******
237|SequenceR|1190|1181|QQQPSALHLA
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 1 QQQPSALH 8
QQQP+A++
Sbjct: 423 QQQPAAVY 430
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 1 QQQPSALH 8
QQQP+A++
Sbjct: 423 QQQPAAVY 430
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 1 QQQPSALH 8
QQQP+A++
Sbjct: 423 QQQPAAVY 430
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 1 QQQPSALH 8
QQQP+A++
Sbjct: 423 QQQPAAVY 430
238|SequenceR|1195|1186|HYIASQQQPS
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 1 HYIASQQQP 9
YI +Q QP
Sbjct: 212 QYITAQDQP 220
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 1 HYIASQQQP 9
YI +Q QP
Sbjct: 212 QYITAQDQP 220
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 1 HYIASQQQP 9
YI +Q QP
Sbjct: 212 QYITAQDQP 220
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 YIASQQQPS 10
Y+AS ++PS
Sbjct: 1507 YVASGERPS 1515
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 HYIASQQQPS 10
H++ Q+QP+
Sbjct: 741 HHLYIQRQPA 750
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 1 HYIASQQQ 8
HY ASQ++
Sbjct: 21 HYEASQKR 28
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 1 HYIASQQQ 8
HY ASQ++
Sbjct: 21 HYEASQKR 28
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 YIASQQQPS 10
Y++S ++PS
Sbjct: 1505 YVSSGERPS 1513
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 YIASQQQPS 10
Y++S ++PS
Sbjct: 1505 YVSSGERPS 1513
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 YIASQQQPS 10
Y++S ++PS
Sbjct: 1502 YVSSGERPS 1510
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 YIASQQQPS 10
Y++S ++PS
Sbjct: 1502 YVSSGERPS 1510
239|SequenceR|1200|1191|PALGAHYIAS
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 PALGAHYIAS 10
PALGA+Y +S
Sbjct: 992 PALGANYFSS 1001
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 PALGAHYIAS 10
PALGA+Y +S
Sbjct: 992 PALGANYFSS 1001
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 PALGAHYIA 9
PALG H A
Sbjct: 282 PALGLHEFA 290
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 1 PALGAHYIA 9
PALG H A
Sbjct: 282 PALGLHEFA 290
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 1 PALGAHYIA 9
PALG H A
Sbjct: 282 PALGLHEFA 290
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 1 PALGAHYIA 9
PALG H A
Sbjct: 282 PALGLHEFA 290
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 1 PALGAHYIA 9
PALG H A
Sbjct: 282 PALGLHEFA 290
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 1 PALGAHYIA 9
PALG H A
Sbjct: 282 PALGLHEFA 290
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 1 PALGAHYIA 9
PALG H A
Sbjct: 282 PALGLHEFA 290
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 1 PALGAHYIA 9
PALG H A
Sbjct: 282 PALGLHEFA 290
>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 PALGAHYIA 9
PALG H A
Sbjct: 282 PALGLHEFA 290
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 1 PALGAHYIA 9
PALG H A
Sbjct: 282 PALGLHEFA 290
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 1 PALGAHY 7
PALG H+
Sbjct: 162 PALGEHW 168
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 1 PALGAHY 7
PA+G H+
Sbjct: 164 PAIGEHW 170
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 1 PALGAHY 7
PA+G H+
Sbjct: 164 PAIGEHW 170
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 1 PALGAHY 7
PA+G H+
Sbjct: 197 PAMGEHW 203
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 1 PALGAH 6
PALG H
Sbjct: 282 PALGLH 287
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 1 PALGAHY 7
PA+G H+
Sbjct: 163 PAMGEHW 169
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 1 PALGAHYI 8
P G HYI
Sbjct: 470 PPEGQHYI 477
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 PALGAHY 7
PA+G H+
Sbjct: 163 PAIGEHW 169
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 1 PALGAHY 7
PA+G H+
Sbjct: 161 PAIGEHW 167
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 1 PALGAHY 7
PA+G H+
Sbjct: 170 PAIGEHW 176
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 1 PALGAHY 7
PA+G H+
Sbjct: 162 PAIGEHW 168
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 1 PALGAHY 7
PA+G H+
Sbjct: 162 PAIGEHW 168
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 1 PALGAHY 7
PA+G H+
Sbjct: 163 PAIGEHW 169
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 PALGAHY 7
PA+G H+
Sbjct: 190 PAIGEHW 196
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 1 PALGAHY 7
PA+G H+
Sbjct: 162 PAIGEHW 168
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 6 HYIAS 10
HYIAS
Sbjct: 132 HYIAS 136
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 PALGAHY 7
PA+G H+
Sbjct: 224 PAIGEHW 230
240|SequenceR|1205|1196|MSPPTPALGA
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 MSPPTPALG 9
M+PP+PA G
Sbjct: 580 MAPPSPARG 588
>sp|US13_HCMVM|MEMBRANE protein US13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 MSPPTPAL 8
M PP P+L
Sbjct: 1 MDPPLPSL 8
>sp|US13_HCMVA|UNCHARACTERIZED protein HVLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 MSPPTPAL 8
M PP P+L
Sbjct: 1 MDPPLPSL 8
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 2 SPPTP 6
SPPTP
Sbjct: 305 SPPTP 309
>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 2 SPPTP 6
SPPTP
Sbjct: 305 SPPTP 309
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 1 MSPPTPALGA 10
++ PTPA+ A
Sbjct: 103 LTTPTPAINA 112
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 1 MSPPTPALGA 10
+ PPTP + +
Sbjct: 723 VKPPTPTVAS 732
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 3 PPTPALGA 10
PPTP + +
Sbjct: 725 PPTPTVAS 732
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 4 PTPALG 9
P PALG
Sbjct: 1269 PDPALG 1274
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 SPPTPALG 9
SPP PA+
Sbjct: 1430 SPPPPAIA 1437
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SPPTP 6
+PPTP
Sbjct: 513 APPTP 517
>sp|VP6_ROTHG|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United
Query: 1 MSPPTPAL 8
M P +PAL
Sbjct: 109 MQPQSPAL 116
>sp|VP6_ROTHF|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate
Query: 1 MSPPTPAL 8
M P +PAL
Sbjct: 109 MQPQSPAL 116
>sp|VP6_ROTHC|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United
Query: 1 MSPPTPAL 8
M P +PAL
Sbjct: 109 MQPQSPAL 116
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SPPTP 6
+PPTP
Sbjct: 513 APPTP 517
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 2 SPPTPALGA 10
+P PA+GA
Sbjct: 12 APTAPAIGA 20
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 SPPTPALG 9
+PP PA+
Sbjct: 1463 TPPPPAIA 1470
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 SPPTPALG 9
+PP PA+
Sbjct: 1453 TPPPPAIA 1460
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 SPPTPALG 9
+PP PA+
Sbjct: 1443 TPPPPAIA 1450
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 SPPTPALG 9
+PP PA+
Sbjct: 1423 APPPPAIA 1430
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 SPPTPALG 9
+PP PA+
Sbjct: 1444 TPPPPAIA 1451
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 SPPTPALG 9
+PP PA+
Sbjct: 1447 TPPPPAIA 1454
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 SPPTPALG 9
+PP PA+
Sbjct: 1442 TPPPPAIA 1449
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 SPPTPALG 9
+PP PA+
Sbjct: 1455 TPPPPAIA 1462
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 SPPTPALG 9
+PP PA+
Sbjct: 1456 TPPPPAIA 1463
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 SPPTPAL 8
+PP PA+
Sbjct: 1416 NPPPPAI 1422
241|SequenceR|1210|1201|NSAPTMSPPT
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 APTMSP 8
PTMSP
Sbjct: 1193 GPTMSP 1198
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 APTMSP 8
PTMSP
Sbjct: 1192 GPTMSP 1197
>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SAPTMSPP 9
S P SPP
Sbjct: 127 SVPNFSPP 134
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 PTMSPPT 10
PTM P T
Sbjct: 355 PTMGPAT 361
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 NSAPTMSPPT 10
S P M+PPT
Sbjct: 182 ESYPNMTPPT 191
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 NSAPTMSPPT 10
S P M+PPT
Sbjct: 182 ESYPNMTPPT 191
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 4 PTMSPPT 10
PTM P T
Sbjct: 355 PTMGPAT 361
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 4 PTMSPPT 10
PTM P T
Sbjct: 355 PTMGPAT 361
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 4 PTMSPPT 10
PTM P T
Sbjct: 355 PTMGPAT 361
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 NSAPTMSPP 9
N PT++PP
Sbjct: 599 NRTPTVAPP 607
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PTMSPPT 10
PTM+PP+
Sbjct: 578 PTMAPPS 584
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 NSAPTMSPP 9
N PT++PP
Sbjct: 599 NRTPTVAPP 607
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 NSAPTMSPP 9
N PT++PP
Sbjct: 599 NRTPTVAPP 607
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 NSAPTMSPPT 10
NS+P +P T
Sbjct: 252 NSSPVYAPST 261
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 4 PTMSPPT 10
PTM P T
Sbjct: 355 PTMGPAT 361
>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 NSAPTMSPPT 10
N +PT PPT
Sbjct: 222 NHSPTSCPPT 231
>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 NSAPTMSPPT 10
N +PT PPT
Sbjct: 233 NHSPTSCPPT 242
>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 NSAPTMSPPT 10
N +PT PPT
Sbjct: 222 NHSPTSCPPT 231
>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 NSAPTMSPPT 10
N +PT PPT
Sbjct: 222 NHSPTSCPPT 231
>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 NSAPTMSPPT 10
N +PT PPT
Sbjct: 222 NHSPTSCPPT 231
>sp|HBSAG_HBVD1|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 NSAPTMSPPT 10
N +PT PPT
Sbjct: 222 NHSPTSCPPT 231
>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)
Query: 3 APTMSPPT 10
AP +PPT
Sbjct: 317 APLTTPPT 324
>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 NSAPTMSPPT 10
N +PT PPT
Sbjct: 222 NHSPTSCPPT 231
>sp|HBSAG_HBVC7|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 NSAPTMSPPT 10
N +PT PPT
Sbjct: 233 NHSPTSCPPT 242
>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)
Query: 3 APTMSPPT 10
AP +PPT
Sbjct: 317 APLTTPPT 324
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 3 APTMSPPT 10
AP PPT
Sbjct: 311 APDRCPPT 318
>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 NSAPTMSPPT 10
N +PT PPT
Sbjct: 222 NHSPTSCPPT 231
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 2 SAPTMSPP 9
+ PT+SPP
Sbjct: 79 TVPTVSPP 86
>sp|HBSAG_HBVCJ|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 NSAPTMSPPT 10
N +PT PPT
Sbjct: 233 NHSPTSCPPT 242
242|SequenceR|1215|1206|QPSQTNSAPT
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 PSQTNSAPT 10
P QT + PT
Sbjct: 4140 PDQTCNTPT 4148
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 PSQTNSAPT 10
P QT + PT
Sbjct: 4140 PDQTCNTPT 4148
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 QPSQTNSAPT 10
QP++T S PT
Sbjct: 404 QPAKTTSQPT 413
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 2 PSQTNSAPT 10
PS+ N +PT
Sbjct: 473 PSKNNESPT 481
>sp|VP30_EBORR|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 PSQTNSAPT 10
P+Q NS P+
Sbjct: 266 PAQDNSTPS 274
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 2 PSQTNSAP 9
P +TN+AP
Sbjct: 22 PPETNTAP 29
>sp|VP30_EBORE|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 PSQTNSAPT 10
P+Q NS P+
Sbjct: 266 PAQDNSTPS 274
243|SequenceR|1220|1211|APFSNQPSQT
>sp|Y206_ADE07|UNCHARACTERIZED 20.6 kDa early protein|Human adenovirus B serotype 7
Query: 2 PFSNQPSQ 9
P+S +PSQ
Sbjct: 12 PWSQRPSQ 19
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 APFSNQ 6
APFSNQ
Sbjct: 682 APFSNQ 687
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PFSNQP 7
P SNQP
Sbjct: 316 PLSNQP 321
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PFSNQPSQ 9
P SN+PS+
Sbjct: 131 PPSNRPSE 138
>sp|PG130_VACCC|39KDA core protein OPG130|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PFSNQPSQT 10
P S QPSQT
Sbjct: 157 PPSTQPSQT 165
>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)
Query: 2 PFSNQPSQT 10
P S QPSQT
Sbjct: 157 PPSTQPSQT 165
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 APFSNQ 6
APFSN+
Sbjct: 682 APFSNE 687
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 1 APFSNQPSQT 10
APF N P+ T
Sbjct: 257 APFVNSPALT 266
>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 2 PFSNQPS 8
P SN PS
Sbjct: 183 PLSNSPS 189
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 1 APFSNQPSQ 9
P SN P Q
Sbjct: 431 GPISNNPDQ 439
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 1 APFSNQPSQ 9
P SN P Q
Sbjct: 431 GPISNNPDQ 439
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 2 PFSNQPS 8
P SN PS
Sbjct: 183 PLSNSPS 189
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 APFSNQ 6
APFSN+
Sbjct: 682 APFSNK 687
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 PFSNQPS 8
PF +QPS
Sbjct: 198 PFCSQPS 204
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 2 PFSNQ 6
PFSNQ
Sbjct: 683 PFSNQ 687
244|SequenceR|1225|1216|VTQQAAPFSN
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 VTQQAAPFS 9
+TQ+AAP
Sbjct: 997 ITQEAAPLD 1005
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 1 VTQQAAP 7
+TQQAAP
Sbjct: 291 LTQQAAP 297
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QQAAPF 8
QQA PF
Sbjct: 218 QQAGPF 223
245|SequenceR|1230|1221|PHITFVTQQA
>sp|K81_HHV8P|PROTEIN K8.1|Human herpesvirus 8 type P
Query: 2 HITFVTQ 8
H+TF+TQ
Sbjct: 118 HVTFMTQ 124
>sp|PG160_VARV|DNA packaging protein OPG160|Variola virus
Query: 2 HITFVTQQ 9
HI FV+ Q
Sbjct: 68 HINFVSSQ 75
>sp|PG160_VAR67|DNA packaging protein OPG160|Variola virus (isolate
Query: 2 HITFVTQQ 9
HI FV+ Q
Sbjct: 68 HINFVSSQ 75
>sp|PG160_VACCC|DNA packaging protein OPG160|Vaccinia virus (strain Copenhagen)
Query: 2 HITFVTQQ 9
HI FV+ Q
Sbjct: 68 HINFVSSQ 75
>sp|PG160_MONPV|DNA packaging protein OPG160|Monkeypox virus (MPXV)
Query: 2 HITFVTQQ 9
HI FV+ Q
Sbjct: 98 HINFVSSQ 105
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TFVTQQA 10
TF+TQ+A
Sbjct: 2108 TFMTQKA 2114
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TFVTQQA 10
TF+TQ+A
Sbjct: 2105 TFMTQKA 2111
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TFVTQQA 10
TF+TQ+A
Sbjct: 2108 TFMTQKA 2114
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TFVTQQA 10
TF+TQ+A
Sbjct: 2108 TFMTQKA 2114
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TFVTQQA 10
TF+TQ+A
Sbjct: 2108 TFMTQKA 2114
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TFVTQQA 10
TF+TQ+A
Sbjct: 2108 TFMTQKA 2114
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 1 PHITFV 6
PH+T++
Sbjct: 572 PHVTYI 577
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 5 FVTQQA 10
F+TQQA
Sbjct: 560 FITQQA 565
246|SequenceR|1235|1226|PQVHSPHITF
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 HSPHITF 10
H PH++F
Sbjct: 5070 HKPHLSF 5076
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 PQVHSPHI 8
P+VH P +
Sbjct: 165 PEVHEPRV 172
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 PQVHSPHI 8
P+VH P +
Sbjct: 165 PEVHEPRV 172
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 1 PQVHSPHI 8
P++H HI
Sbjct: 50 PEIHKRHI 57
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 3 VHSPHITF 10
V PH+TF
Sbjct: 714 VKVPHLTF 721
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 3 VHSPHITF 10
V PH+TF
Sbjct: 714 VKVPHLTF 721
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 PQVHSPHITF 10
P+ +SP +TF
Sbjct: 620 PKYNSPELTF 629
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 3 VHSPHITF 10
V PH+TF
Sbjct: 714 VKVPHLTF 721
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 3 VHSPHITF 10
V PH+TF
Sbjct: 714 VKVPHLTF 721
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 3 VHSPHITF 10
V PH+TF
Sbjct: 714 VKVPHLTF 721
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 3 VHSPHITF 10
V PH+TF
Sbjct: 714 VKVPHLTF 721
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 3 VHSPHITF 10
V PH+TF
Sbjct: 714 VKVPHLTF 721
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 PQVHSPHITF 10
P+ +SP +TF
Sbjct: 620 PKYNSPELTF 629
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 PQVHSPHITF 10
P+ +SP +TF
Sbjct: 620 PKYNSPELTF 629
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 1 PQVHSPHITF 10
P+ +SP +TF
Sbjct: 620 PKYNSPELTF 629
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin)
Query: 4 HSPHITF 10
H PH TF
Sbjct: 17 HGPHTTF 23
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 HSPHITF 10
H PH TF
Sbjct: 17 HGPHTTF 23
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VHSPH 7
+H+PH
Sbjct: 515 IHTPH 519
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 2 QVHSPHI 8
QVH HI
Sbjct: 253 QVHENHI 259
>sp|VE2_HPV31|REGULATORY protein E2|Human papillomavirus 31
Query: 3 VHSPHITF 10
VH HIT+
Sbjct: 160 VHEGHITY 167
>sp|VP22_VZVO|TEGUMENT protein VP22|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PQVHSPH 7
P+VH P+
Sbjct: 73 PRVHQPN 79
>sp|VP22_VZVD|TEGUMENT protein VP22|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PQVHSPH 7
P+VH P+
Sbjct: 73 PRVHQPN 79
>sp|X_HBVE3|PROTEIN X|Hepatitis B virus genotype E
Query: 1 PQVHSPHITF 10
P VH H++
Sbjct: 46 PAVHGAHLSL 55
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 2 QVHSPH 7
+VH PH
Sbjct: 943 RVHQPH 948
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PQVHSP 6
P+VH P
Sbjct: 103 PRVHGP 108
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PQVHSP 6
P+VH P
Sbjct: 103 PRVHGP 108
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 2 QVHSPH 7
+VH PH
Sbjct: 912 RVHQPH 917
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 2 QVHSPH 7
+VH PH
Sbjct: 915 RVHQPH 920
>sp|VFUS_VACC6|14 kDa fusion protein|Vaccinia virus (strain WR 65-16)
Query: 1 PQVHSPHI 8
P++H+P +
Sbjct: 46 PRIHAPEL 53
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 2 QVHSPH 7
+VH PH
Sbjct: 918 RVHQPH 923
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 2 QVHSPH 7
+VH PH
Sbjct: 919 RVHQPH 924
247|SequenceR|1240|1231|PNTYAPQVHS
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 NTYAPQVH 9
N Y+P+VH
Sbjct: 351 NYYSPRVH 358
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 NTYAPQVH 9
N Y P+VH
Sbjct: 351 NYYNPRVH 358
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 PNTYAPQV 8
PN Y P +
Sbjct: 132 PNDYTPDI 139
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 NTYAPQVH 9
N Y P++H
Sbjct: 351 NYYNPRIH 358
>sp|TEG3_HHV11|TEGUMENT protein UL14|Human herpesvirus 1 (strain 17)
Query: 3 TYAPQVHS 10
T AP+VH+
Sbjct: 154 TSAPKVHA 161
>sp|GN_HHV6U|ENVELOPE glycoprotein N|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 YAPQVHS 10
Y+P+ HS
Sbjct: 32 YSPECHS 38
>sp|SCP_HHV2H|SMALL capsomere-interacting protein|Human herpesvirus 2 (strain HG52)
Query: 2 NTYAPQ 7
NT+APQ
Sbjct: 71 NTFAPQ 76
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 YAPQVHS 10
Y P+VH+
Sbjct: 62 YDPEVHN 68
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 1 PNTYAPQ 7
P TY PQ
Sbjct: 542 PRTYQPQ 548
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 PNTYAPQ 7
P TY PQ
Sbjct: 541 PRTYQPQ 547
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 1 PNTYAPQVH 9
P ++AP VH
Sbjct: 587 PPSHAPSVH 595
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 1 PNTYAPQ 7
P TY PQ
Sbjct: 529 PRTYQPQ 535
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 TYAPQVH 9
T++P++H
Sbjct: 292 TFSPRIH 298
>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PNTYAPQVHS 10
P YA Q+H+
Sbjct: 269 PRNYAVQLHA 278
248|SequenceR|1245|1236|HAMHPPNTYA
>sp|PG038_MONPV|EARLY protein OPG038|Monkeypox virus (MPXV)
Query: 1 HAMHPPNTY 9
H +HP N Y
Sbjct: 173 HYLHPKNKY 181
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 3 MHPPNTYA 10
+HP NTYA
Sbjct: 262 LHPNNTYA 269
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 3 MHPPNTYA 10
+HP NTYA
Sbjct: 262 LHPNNTYA 269
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 3 MHPPNTYA 10
+HP NTYA
Sbjct: 264 LHPNNTYA 271
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 3 MHPPNTYA 10
+HP NTYA
Sbjct: 264 LHPNNTYA 271
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 3 MHPPNTYA 10
+HP NTYA
Sbjct: 264 LHPNNTYA 271
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 3 MHPPN 7
+HPPN
Sbjct: 364 VHPPN 368
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HAMHPPN 7
H M PP+
Sbjct: 195 HVMQPPH 201
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 1 HAMHPPN 7
H M PP+
Sbjct: 195 HVMQPPH 201
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 HAMHPPN 7
H M PP+
Sbjct: 195 HVMQPPH 201
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 HAMHPPN 7
H M PP+
Sbjct: 195 HVMQPPH 201
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 4 HPPNT 8
HPPN+
Sbjct: 197 HPPNS 201
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HAMHPPNTY 9
HAM P T+
Sbjct: 4 HAMEEPKTF 12
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 4 HPPNTYA 10
H PN YA
Sbjct: 53 HIPNIYA 59
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 HAMHPPNTYA 10
A +PP T+A
Sbjct: 305 QAAYPPGTFA 314
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HAMHPPNTYA 10
A +PP T+A
Sbjct: 305 QAAYPPGTFA 314
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 HAMHPPNTYA 10
A +PP T+A
Sbjct: 305 QAAYPPGTFA 314
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 4 HPPN 7
HPPN
Sbjct: 197 HPPN 200
>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus
Query: 5 PPNTYA 10
PPN YA
Sbjct: 94 PPNEYA 99
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus
Query: 5 PPNTYA 10
PPN YA
Sbjct: 94 PPNEYA 99
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 4 HPPN 7
HPPN
Sbjct: 197 HPPN 200
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 1 HAMHPPNTY 9
+ +H P TY
Sbjct: 400 YCVHSPTTY 408
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 4 HPPN 7
HPPN
Sbjct: 197 HPPN 200
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 4 HPPNT 8
HPP T
Sbjct: 198 HPPTT 202
>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus
Query: 5 PPNTYA 10
PP TYA
Sbjct: 48 PPGTYA 53
>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate
Query: 5 PPNTYA 10
PP TYA
Sbjct: 48 PPGTYA 53
>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /
Query: 5 PPNTYA 10
PP TYA
Sbjct: 48 PPGTYA 53
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 4 HPPNT 8
HPP T
Sbjct: 198 HPPTT 202
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 4 HPPNT 8
HPP T
Sbjct: 198 HPPTT 202
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 HAMHPPNTY 9
A +PPN Y
Sbjct: 568 RAYYPPNAY 576
>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)
Query: 5 PPNTYA 10
PP TYA
Sbjct: 48 PPGTYA 53
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 4 HPPN 7
HPPN
Sbjct: 69 HPPN 72
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 4 HPPN 7
HPPN
Sbjct: 69 HPPN 72
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 4 HPPN 7
HPPN
Sbjct: 69 HPPN 72
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 4 HPPN 7
HPPN
Sbjct: 69 HPPN 72
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 4 HPPN 7
HPPN
Sbjct: 69 HPPN 72
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 4 HPPNTYA 10
HP TYA
Sbjct: 589 HPETTYA 595
>sp|NCAP_RVFVZ|NUCLEOPROTEIN valley fever virus (strain
Query: 1 HAMHP 5
H MHP
Sbjct: 143 HMMHP 147
>sp|NCAP_RVFV|NUCLEOPROTEIN valley fever virus (RVFV)
Query: 1 HAMHP 5
H MHP
Sbjct: 143 HMMHP 147
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 HAMHPPNTY 9
H+M P TY
Sbjct: 153 HSMVAPATY 161
249|SequenceR|1250|1241|HAQPVHAMHP
>sp|NCAP_RVFVZ|NUCLEOPROTEIN valley fever virus (strain
Query: 2 AQPVHAMHP 10
A P H MHP
Sbjct: 139 AYPRHMMHP 147
>sp|NCAP_RVFV|NUCLEOPROTEIN valley fever virus (RVFV)
Query: 2 AQPVHAMHP 10
A P H MHP
Sbjct: 139 AYPRHMMHP 147
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 3 QPVHAMHP 10
QP+ +HP
Sbjct: 359 QPIKVVHP 366
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 304 SMPFHNIHP 312
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 304 SMPFHNIHP 312
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 304 SMPFHNIHP 312
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 304 SMPFHNIHP 312
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 304 SMPFHNIHP 312
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 304 SMPFHNIHP 312
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 304 SMPFHNIHP 312
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 300 SMPFHNIHP 308
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 296 SMPFHNIHP 304
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 304 SMPFHNIHP 312
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 304 SMPFHNIHP 312
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 304 SMPFHNIHP 312
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 304 SMPFHNIHP 312
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 302 SMPFHNIHP 310
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 293 SMPFHNIHP 301
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 293 SMPFHNIHP 301
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 293 SMPFHNIHP 301
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 293 SMPFHNIHP 301
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 AQPVHAMHP 10
+ P H +HP
Sbjct: 304 SMPFHNIHP 312
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 4 PVHAMHP 10
P H +HP
Sbjct: 304 PFHNIHP 310
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 4 PVHAMHP 10
P H +HP
Sbjct: 304 PFHNVHP 310
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 4 PVHAMHP 10
P H +HP
Sbjct: 304 PFHNVHP 310
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 4 PVHAMHP 10
P H +HP
Sbjct: 304 PFHNVHP 310
>sp|HEMA_I60A0|HEMAGGLUTININ A virus (strain A/Ann
Query: 4 PVHAMHP 10
P H +HP
Sbjct: 304 PFHNVHP 310
>sp|SCP_HHV6Z|SMALL capsomere-interacting protein|Human herpesvirus 6B (strain Z29)
Query: 3 QPVHAMHP 10
QP A HP
Sbjct: 40 QPTMANHP 47
>sp|SCP_HHV6H|SMALL capsomere-interacting protein|Human herpesvirus 6B (HHV-6 variant
Query: 3 QPVHAMHP 10
QP A HP
Sbjct: 40 QPTMANHP 47
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 1 HAQPVH 6
HAQ VH
Sbjct: 71 HAQEVH 76
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 5 VHAMHP 10
+HAM+P
Sbjct: 390 IHAMNP 395
>sp|DR8_HHV6U|UNCHARACTERIZED protein DR8|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HAQPVHAM 8
HAQP H +
Sbjct: 89 HAQPTHVV 96
250|SequenceR|1255|1246|MGSQVHAQPV
>sp|CAP9_ADE41|HEXON-INTERLACING protein IX|Human adenovirus F serotype 41
Query: 1 MGSQVHAQPV 10
MGS V +PV
Sbjct: 36 MGSNVDGRPV 45
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 3 SQVHAQPV 10
SQ+H PV
Sbjct: 1737 SQIHKSPV 1744
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 3 SQVHAQPV 10
SQ+H PV
Sbjct: 1728 SQIHKSPV 1735
>sp|CAP9_ADE07|HEXON-INTERLACING protein IX|Human adenovirus B serotype 7
Query: 1 MGSQVHAQPV 10
MGS V +PV
Sbjct: 31 MGSTVDGRPV 40
>sp|CAP9_ADE03|HEXON-INTERLACING protein IX|Human adenovirus B serotype 3
Query: 1 MGSQVHAQPV 10
MGS V +PV
Sbjct: 31 MGSTVDGRPV 40
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 SQVHAQP 9
++VHA+P
Sbjct: 199 AEVHAEP 205
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 SQVHAQP 9
++VHA+P
Sbjct: 199 AEVHAEP 205
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 SQVHAQP 9
++VHA+P
Sbjct: 199 AEVHAEP 205
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 SQVHAQP 9
++VHA+P
Sbjct: 199 AEVHAEP 205
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 SQVHAQP 9
++VHA+P
Sbjct: 199 AEVHAEP 205
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 SQVHAQP 9
++VHA+P
Sbjct: 199 AEVHAEP 205
>sp|TAT_HV1MP|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 GSQVHAQPV 10
GS++H PV
Sbjct: 61 GSKIHQDPV 69
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 3 SQVHAQPV 10
+Q+H PV
Sbjct: 1729 TQIHKSPV 1736
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 5 VHAQPV 10
+HAQP+
Sbjct: 197 LHAQPI 202
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 4 QVHAQP 9
Q+H QP
Sbjct: 170 QIHTQP 175
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 1 MGSQVHA 7
MGS VH+
Sbjct: 447 MGSAVHS 453
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 MGSQVHA 7
MGS VH+
Sbjct: 447 MGSAVHS 453
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 1 MGSQVHA 7
MGS VH+
Sbjct: 447 MGSAVHS 453
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 MGSQVHA 7
MGS VH+
Sbjct: 447 MGSAVHS 453
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 5 VHAQPV 10
+HAQP+
Sbjct: 197 LHAQPI 202
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 MGSQVH 6
MG Q+H
Sbjct: 1194 MGGQIH 1199
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 MGSQVH 6
MG Q+H
Sbjct: 1194 MGGQIH 1199
>sp|CAP9_ADE05|HEXON-INTERLACING protein IX|Human adenovirus C serotype 5
Query: 1 MGSQVHAQPV 10
MGS + +PV
Sbjct: 30 MGSSIDGRPV 39
>sp|CAP9_ADE02|HEXON-INTERLACING protein IX|Human adenovirus C serotype 2
Query: 1 MGSQVHAQPV 10
MGS + +PV
Sbjct: 30 MGSSIDGRPV 39
251|SequenceR|1260|1251|PHSPVMGSQV
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 HSPVMGSQ 9
HSP +G Q
Sbjct: 1738 HSPAVGDQ 1745
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 HSPVMGSQ 9
HSP +G Q
Sbjct: 1738 HSPAVGDQ 1745
>sp|PG087_VARV|LATE transcription elongation factor OPG087|Variola virus
Query: 2 HSPVMGSQV 10
H P+ GS++
Sbjct: 139 HVPIAGSKL 147
>sp|PG087_VAR67|LATE transcription elongation factor OPG087|Variola virus (isolate
Query: 2 HSPVMGSQV 10
H P+ GS++
Sbjct: 139 HVPIAGSKL 147
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 2 HSPVMGS 8
HSP++ S
Sbjct: 112 HSPIISS 118
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 2 HSPVMGS 8
HSP++ S
Sbjct: 112 HSPIISS 118
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 HSPVMGS 8
HSP++ S
Sbjct: 112 HSPIISS 118
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 HSPVMGS 8
HSP++ S
Sbjct: 112 HSPIISS 118
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 2 HSPVMGS 8
HSP++ S
Sbjct: 112 HSPIISS 118
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 3 SPVMGSQV 10
+PV+GSQ
Sbjct: 859 TPVIGSQA 866
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 3 SPVMGSQV 10
+PV+GSQ
Sbjct: 859 TPVIGSQA 866
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 3 SPVMGSQV 10
+PV+GSQ
Sbjct: 859 TPVIGSQA 866
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 3 SPVMGSQV 10
+PV+GSQ
Sbjct: 859 TPVIGSQA 866
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 SPVMGSQV 10
+PV+GSQ
Sbjct: 859 TPVIGSQA 866
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 3 SPVMGSQV 10
+PV+GSQ
Sbjct: 859 TPVIGSQA 866
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 3 SPVMGSQV 10
+PV+GSQ
Sbjct: 859 TPVIGSQA 866
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 3 SPVMGSQV 10
+PV+GSQ
Sbjct: 859 TPVIGSQA 866
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 3 SPVMGSQV 10
+PV+GSQ
Sbjct: 859 TPVIGSQA 866
252|SequenceR|1265|1256|PAHATPHSPV
>sp|HBEAG_HBVD5|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 PAHATPH 7
P H TPH
Sbjct: 74 PEHCTPH 80
>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 1 PAHATPH 7
P H +PH
Sbjct: 74 PEHCSPH 80
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 1 PAHATPHSPV 10
P A PH P+
Sbjct: 627 PLQANPHPPL 636
>sp|CAPSD_HBVA9|CAPSID protein|Hepatitis B virus genotype A3
Query: 1 PAHATPH 7
P H +PH
Sbjct: 45 PEHCSPH 51
>sp|CAPSD_HBVD5|CAPSID protein|Hepatitis B virus genotype D
Query: 1 PAHATPH 7
P H TPH
Sbjct: 45 PEHCTPH 51
>sp|NSP6_ROTHD|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 3 HATPHSP 9
H T HSP
Sbjct: 47 HRTIHSP 53
>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1)
Query: 1 PAHATPHSP 9
PAHA P P
Sbjct: 66 PAHAVPAQP 74
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 AHATPHSP 9
+ TPH P
Sbjct: 1786 SSVTPHEP 1793
>sp|NSP6_ROTH6|NON-STRUCTURAL protein 6|Rotavirus A (strain
Query: 3 HATPHSP 9
H T HSP
Sbjct: 47 HQTIHSP 53
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 AHATPHSP 9
+ TPH P
Sbjct: 1786 SSVTPHEP 1793
>sp|NSP6_ROTHB|NON-STRUCTURAL protein 6|Rotavirus A (strain
Query: 3 HATPHSP 9
H T HSP
Sbjct: 47 HRTIHSP 53
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 AHATPHSP 9
+ TPH P
Sbjct: 1786 SSVTPHEP 1793
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PAHATPHS 8
P H TP S
Sbjct: 20 PVHPTPAS 27
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PAHATPHS 8
P H TP S
Sbjct: 20 PVHPTPAS 27
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PAHATPHS 8
P H TP S
Sbjct: 20 PVHPTPAS 27
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 3 HATPHSPV 10
H+TPH+ V
Sbjct: 483 HSTPHTLV 490
>sp|HBEAG_HBVF6|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 1 PAHATPHSPV 10
PA+ P++P+
Sbjct: 159 PAYRPPNAPI 168
>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 PAHATPH 7
P H +PH
Sbjct: 74 PEHCSPH 80
Query: 1 PAHATPHSPV 10
PA+ P++P+
Sbjct: 159 PAYRPPNAPI 168
>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H
Query: 1 PAHATPHSPV 10
PA+ P++P+
Sbjct: 159 PAYRPPNAPI 168
>sp|HBEAG_HBVF1|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 1 PAHATPHSPV 10
PA+ P++P+
Sbjct: 159 PAYRPPNAPI 168
>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 1 PAHATPH 7
P H +PH
Sbjct: 74 PEHCSPH 80
253|SequenceR|1270|1261|TMLMMPAHAT
>sp|RDRP_I82A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 48 VMMPAHG 54
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 LMMPAHAT 10
L +PAHA+
Sbjct: 418 LYLPAHAS 425
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 TMLMMPAHAT 10
TML+ P H T
Sbjct: 609 TMLLYPDHPT 618
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 LMMPAHA 9
+MMPAH
Sbjct: 644 VMMPAHG 650
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 TMLMMPAHAT 10
T+L+ P H T
Sbjct: 608 TLLLYPDHPT 617
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 TMLMMPAHAT 10
T+L+ P H T
Sbjct: 608 TLLLYPDHPT 617
254|SequenceR|1275|1266|GPPQTTMLMM
>sp|V_PI4HB|NON-STRUCTURAL protein V|Human parainfluenza 4b virus (strain
Query: 3 PQTTMLMM 10
PQT ML+M
Sbjct: 96 PQTGMLLM 103
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PPQTTMLM 9
PP+TT+L+
Sbjct: 388 PPRTTLLL 395
Query: 2 PPQTT 6
PPQTT
Sbjct: 169 PPQTT 173
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PPQTTMLM 9
PP+TT+L+
Sbjct: 388 PPRTTLLL 395
Query: 2 PPQTT 6
PPQTT
Sbjct: 169 PPQTT 173
>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain
Query: 3 PQTTMLMM 10
PQT ML+M
Sbjct: 96 PQTGMLLM 103
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPQTTMLM 9
PP+TT+L+
Sbjct: 389 PPRTTLLL 396
Query: 2 PPQTT 6
PPQTT
Sbjct: 170 PPQTT 174
255|SequenceR|1280|1271|AAQPGGPPQT
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 4 PGGPP 8
PGGPP
Sbjct: 271 PGGPP 275
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 4 PGGPP 8
PGGPP
Sbjct: 271 PGGPP 275
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 AAQPGGPP 8
A QPGG P
Sbjct: 1156 AKQPGGKP 1163
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 AAQPGGPP 8
A QPGG P
Sbjct: 1156 AKQPGGKP 1163
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 2 AQPGGPPQT 10
A PG PP +
Sbjct: 754 ADPGSPPHS 762
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 AAQPGGPPQ 9
+ PGGP Q
Sbjct: 1164 SGHPGGPSQ 1172
Query: 3 QPGGP 7
+PGGP
Sbjct: 4 KPGGP 8
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 AAQPGGPPQ 9
+ PGGP Q
Sbjct: 1164 SGHPGGPSQ 1172
Query: 3 QPGGP 7
+PGGP
Sbjct: 4 KPGGP 8
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 AAQPGGPPQ 9
+ PGGP Q
Sbjct: 1164 SGHPGGPSQ 1172
Query: 3 QPGGP 7
+PGGP
Sbjct: 4 KPGGP 8
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 PGGPPQT 10
PG PPQ+
Sbjct: 123 PGFPPQS 129
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 1 AAQPGG 6
AAQPGG
Sbjct: 135 AAQPGG 140
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 PGGPPQT 10
PG PPQ+
Sbjct: 123 PGFPPQS 129
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 PGGPPQT 10
PG PPQ+
Sbjct: 123 PGFPPQS 129
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 1 AAQPGG 6
AAQPGG
Sbjct: 136 AAQPGG 141
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 1 AAQPGG 6
AAQPGG
Sbjct: 136 AAQPGG 141
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 1 AAQPGG 6
AAQPGG
Sbjct: 135 AAQPGG 140
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 PGGPPQT 10
PG PPQ+
Sbjct: 123 PGFPPQS 129
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 PGGPPQT 10
PG PPQ+
Sbjct: 123 PGFPPQS 129
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 1 AAQPGG 6
AAQPGG
Sbjct: 136 AAQPGG 141
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 4 PGGPPQT 10
PG PPQ+
Sbjct: 123 PGFPPQS 129
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 1 AAQPGG 6
AAQPGG
Sbjct: 135 AAQPGG 140
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 PGGPPQT 10
PG PPQ+
Sbjct: 123 PGFPPQS 129
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 1 AAQPGG 6
AAQPGG
Sbjct: 136 AAQPGG 141
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 1 AAQPGG 6
AAQPGG
Sbjct: 135 AAQPGG 140
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 1 AAQPGG 6
AAQPGG
Sbjct: 136 AAQPGG 141
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 1 AAQPGG 6
AAQPGG
Sbjct: 135 AAQPGG 140
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 1 AAQPGG 6
AAQPGG
Sbjct: 136 AAQPGG 141
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 1 AAQPGG 6
AAQPGG
Sbjct: 136 AAQPGG 141
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 1 AAQPGGPPQT 10
+A+PG P+T
Sbjct: 239 SARPGKRPRT 248
>sp|VE6_HPV24|PROTEIN E6|Human papillomavirus 24
Query: 2 AQPGGP 7
AQPG P
Sbjct: 2 AQPGKP 7
>sp|NS1_I07A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 QPGGPPQT 10
+ GGPP T
Sbjct: 208 ETGGPPFT 215
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 4 PGGPPQT 10
PG PPQ+
Sbjct: 123 PGFPPQS 129
>sp|UL133_HCMVM|PROTEIN UL133|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 AQPGGPPQ 9
A PGGPP
Sbjct: 211 AMPGGPPD 218
>sp|NS1_I76A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 3 QPGGPPQT 10
+ GGPP T
Sbjct: 208 EDGGPPLT 215
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 1 AAQPGGPPQT 10
+A G PPQT
Sbjct: 533 SAIAGQPPQT 542
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 2 AQPGGPPQT 10
AQ GG P+T
Sbjct: 517 AQEGGEPKT 525
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 AAQPGGPP 8
+ QPG PP
Sbjct: 746 SQQPGEPP 753
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 4 PGGPP 8
P GPP
Sbjct: 271 PNGPP 275
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 4 PGGPP 8
P GPP
Sbjct: 271 PNGPP 275
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 4 PGGPP 8
P GPP
Sbjct: 271 PNGPP 275
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 4 PGGPP 8
P GPP
Sbjct: 271 PNGPP 275
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 4 PGGPP 8
P GPP
Sbjct: 271 PNGPP 275
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 4 PGGPP 8
P GPP
Sbjct: 271 PNGPP 275
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 4 PGGPP 8
P GPP
Sbjct: 271 PNGPP 275
>sp|NS1_I00A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/New
Query: 3 QPGGPPQT 10
+ GGPP T
Sbjct: 208 ETGGPPFT 215
>sp|LMP1_EBVR|LATENT membrane protein 1|Epstein-Barr virus (strain Raji) (HHV-4)
Query: 1 AAQPGGPPQ 9
A GGPPQ
Sbjct: 314 AGNDGGPPQ 322
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 AAQPGGPP 8
+ QPG PP
Sbjct: 746 SQQPGQPP 753
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 QPGGPPQT 10
Q GG P T
Sbjct: 2068 QAGGTPST 2075
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 QPGGPPQT 10
Q GG P T
Sbjct: 2068 QAGGTPST 2075
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 QPGGPPQT 10
Q GG P T
Sbjct: 2068 QAGGTPST 2075
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 AAQPGGPPQT 10
A +P GPP +
Sbjct: 790 ACEPSGPPTS 799
>sp|LMP1_EBVB9|LATENT membrane protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 AAQPGGPPQ 9
A GGPPQ
Sbjct: 314 AGNDGGPPQ 322
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 AAQPGGPPQT 10
+ +PGGP ++
Sbjct: 2 SKKPGGPGKS 11
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 AAQPGGPPQT 10
+ +PGGP ++
Sbjct: 2 SKKPGGPGKS 11
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 4 PGGPP 8
P GPP
Sbjct: 629 PNGPP 633
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PGGPPQ 9
PGG P+
Sbjct: 366 PGGDPE 371
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 AAQPGGP 7
AA+PG P
Sbjct: 1596 AAEPGKP 1602
Query: 1 AAQPGGP 7
+ +PGGP
Sbjct: 2 SKKPGGP 8
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 AAQPGGPPQ 9
+A PG PPQ
Sbjct: 2766 SAPPGDPPQ 2774
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 AAQPGGP 7
+ +PGGP
Sbjct: 2 SKKPGGP 8
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 AAQPGGPPQ 9
+A PG PPQ
Sbjct: 2766 SAPPGDPPQ 2774
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 AQPGGPPQ 9
A+PGGP +
Sbjct: 234 ARPGGPEE 241
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 AAQPGGPPQ 9
+A PG PPQ
Sbjct: 2767 SAPPGDPPQ 2775
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 AAQPGGP 7
+ +PGGP
Sbjct: 2 SKKPGGP 8
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 AAQPGGPPQ 9
+A PG PPQ
Sbjct: 2766 SAPPGDPPQ 2774
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 AAQPGGPPQ 9
+A PG PPQ
Sbjct: 2767 SAPPGDPPQ 2775
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 AAQPGGPPQ 9
+A PG PPQ
Sbjct: 2775 SAPPGDPPQ 2783
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 AAQPGGPPQ 9
+A PG PPQ
Sbjct: 2767 SAPPGDPPQ 2775
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 4 PGGPPQT 10
PG PP T
Sbjct: 52 PGEPPST 58
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 AAQPGGPPQ 9
+A PG PPQ
Sbjct: 2766 SAPPGDPPQ 2774
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 AAQPGGPPQ 9
+A PG PPQ
Sbjct: 2767 SAPPGDPPQ 2775
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 AAQPGGPPQ 9
+A PG PPQ
Sbjct: 2767 SAPPGDPPQ 2775
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 AAQPGGP 7
A +PGGP
Sbjct: 790 ACEPGGP 796
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 AAQPGGP 7
A +PGGP
Sbjct: 790 ACEPGGP 796
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 3 QPGGPPQ 9
QP PPQ
Sbjct: 67 QPAKPPQ 73
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 QPGGP 7
+PGGP
Sbjct: 4 KPGGP 8
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 QPGGP 7
+PGGP
Sbjct: 4 KPGGP 8
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 QPGGP 7
+PGGP
Sbjct: 4 KPGGP 8
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 QPGGP 7
+PGGP
Sbjct: 4 KPGGP 8
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 AAQPGGP 7
+ +PGGP
Sbjct: 2 SKKPGGP 8
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 QPGGP 7
+PGGP
Sbjct: 4 KPGGP 8
256|SequenceR|1285|1276|ASQALAAQPG
***** No hits found ******
257|SequenceR|1290|1281|PIPQLASQAL
>sp|VE2_HPV38|REGULATORY protein E2|Human papillomavirus 38
Query: 1 PIPQLAS 7
P+P LAS
Sbjct: 58 PVPSLAS 64
258|SequenceR|1295|1286|ATTSVPIPQL
>sp|VE6_HPV57|PROTEIN E6|Human papillomavirus 57
Query: 3 TSVPIPQL 10
T +PIPQL
Sbjct: 91 TGIPIPQL 98
>sp|VE6_HPV2A|PROTEIN E6|Human papillomavirus type 2a
Query: 3 TSVPIPQL 10
T +PIPQL
Sbjct: 91 TGIPIPQL 98
>sp|VE6_HPV27|PROTEIN E6|Human papillomavirus 27
Query: 3 TSVPIPQL 10
T +PIPQL
Sbjct: 97 TGIPIPQL 104
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 2 TTSVPIPQL 10
TTS+PI +L
Sbjct: 178 TTSLPIARL 186
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 2 TTSVPIPQL 10
TTS+PI +L
Sbjct: 178 TTSLPIARL 186
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 2 TTSVPIPQL 10
TTS+PI +L
Sbjct: 178 TTSLPIARL 186
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 2 TTSVPIPQL 10
TTS+PI +L
Sbjct: 178 TTSLPIARL 186
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 2 TTSVPIPQL 10
TTS+PI +L
Sbjct: 178 TTSLPIARL 186
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 2 TTSVPIPQL 10
TTS+PI +L
Sbjct: 178 TTSLPIARL 186
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 2 TTSVPIPQL 10
TTS+PI +L
Sbjct: 178 TTSLPIARL 186
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 2 TTSVPIPQL 10
TTS+PI +L
Sbjct: 178 TTSLPIARL 186
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 2 TTSVPIPQL 10
TTS+PI +L
Sbjct: 178 TTSLPIARL 186
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 2 TTSVPIPQL 10
TTS+PI +L
Sbjct: 178 TTSLPIARL 186
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 2 TTSVPIPQL 10
TTS+PI +L
Sbjct: 178 TTSLPIARL 186
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 2 TTSVPIPQL 10
TTS+PI +L
Sbjct: 178 TTSLPIARL 186
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 2 TTSVPIPQL 10
TTS+PI +L
Sbjct: 178 TTSLPIARL 186
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 2 TTSVPIPQL 10
TTS+PI +L
Sbjct: 178 TTSLPIARL 186
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 2 TTSVPIPQL 10
TTS+PI +L
Sbjct: 178 TTSLPITRL 186
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 4 SVPIPQ 9
++PIPQ
Sbjct: 576 AIPIPQ 581
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 1 ATTSVPIPQL 10
+ VPIP+L
Sbjct: 621 SAAGVPIPEL 630
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 2 TTSVPIP 8
TTS PIP
Sbjct: 212 TTSTPIP 218
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 SVPIPQ 9
SVPIP+
Sbjct: 2071 SVPIPE 2076
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 SVPIPQ 9
SVPIP+
Sbjct: 2072 SVPIPE 2077
259|SequenceR|1300|1291|MYPFHATTSV
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 YPFHATTS 9
+P+H+T S
Sbjct: 3 FPYHSTVS 10
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 YPFHATTS 9
+P+H+T S
Sbjct: 3 FPYHSTVS 10
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 2 YPFHATTSV 10
YPF ATT++
Sbjct: 290 YPFDATTNL 298
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 3 PFHATTSV 10
P H TTS+
Sbjct: 227 PLHTTTSI 234
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 YPFHATTS 9
YPF+A S
Sbjct: 609 YPFYANAS 616
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 YPFHATTS 9
YPF+A S
Sbjct: 609 YPFYANAS 616
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 YPFHATTS 9
YPF+A S
Sbjct: 609 YPFYANAS 616
>sp|VE8E2_HPV42|PROTEIN E8^E2C|Human papillomavirus 42
Query: 3 PFHATTSV 10
P H TTS+
Sbjct: 34 PLHTTTSI 41
>sp|ARBH_HHV8P|APOPTOSIS regulator Bcl-2 homolog|Human herpesvirus 8 type P
Query: 4 FHATTSV 10
FH+TT +
Sbjct: 60 FHSTTGI 66
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 3 PFHATTSV 10
PFH T ++
Sbjct: 291 PFHTTMTL 298
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 3 PFHATTSV 10
PFH T ++
Sbjct: 291 PFHTTMTL 298
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 3 PFHATTSV 10
PFH T ++
Sbjct: 291 PFHTTMTL 298
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 MYPFH 5
M+PFH
Sbjct: 450 MHPFH 454
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 MYPFH 5
M+PFH
Sbjct: 450 MHPFH 454
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 3 PFHATTSV 10
PFH T ++
Sbjct: 292 PFHTTMTL 299
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 3 PFHATTSV 10
PFH T ++
Sbjct: 291 PFHTTMTL 298
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 3 PFHATTSV 10
PFH T ++
Sbjct: 291 PFHTTMTL 298
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 3 PFHATTSV 10
PFH T ++
Sbjct: 292 PFHTTMTL 299
260|SequenceR|1305|1296|VSPHTMYPFH
>sp|MCES_YMTV5|MRNA-CAPPING enzyme small subunit|Yaba monkey tumor virus (strain
Query: 4 HTMYPFH 10
HT++PF+
Sbjct: 13 HTLFPFY 19
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 VSPHTMY 7
V+PHTM+
Sbjct: 78 VNPHTMF 84
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 1 VSPHTMY 7
+ PHT Y
Sbjct: 249 IQPHTQY 255
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 1 VSPHTMY 7
+ PHT Y
Sbjct: 249 IQPHTQY 255
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 1 VSPHTMY 7
+ PHT Y
Sbjct: 249 IQPHTQY 255
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PHTMYPF 9
PH +PF
Sbjct: 352 PHENFPF 358
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PHTMYPF 9
PH +PF
Sbjct: 352 PHENFPF 358
>sp|PG038_VACCC|EARLY protein OPG038|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VSPHTMYP 8
++PH ++P
Sbjct: 170 INPHYLHP 177
>sp|PG038_VARV|EARLY protein OPG038|Variola virus
Query: 1 VSPHTMYP 8
++PH ++P
Sbjct: 170 INPHYLHP 177
>sp|PG038_VAR67|EARLY protein OPG038|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VSPHTMYP 8
++PH ++P
Sbjct: 170 INPHYLHP 177
>sp|DUT_HHV6Z|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6B (strain
Query: 2 SPHTMYPFH 10
+P T YP H
Sbjct: 108 NPVTFYPRH 116
>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)
Query: 5 TMYPFH 10
T+YP H
Sbjct: 198 TIYPMH 203
>sp|PG038_MONPV|EARLY protein OPG038|Monkeypox virus (MPXV)
Query: 1 VSPHTMYP 8
++PH ++P
Sbjct: 170 INPHYLHP 177
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 PHTMYPFH 10
PH + P H
Sbjct: 1158 PHALVPEH 1165
>sp|DUT_HHV6U|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 2 SPHTMYPFH 10
+P T YP H
Sbjct: 108 NPVTFYPRH 116
>sp|DUT_HHV6G|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 2 SPHTMYPFH 10
+P T YP H
Sbjct: 108 NPVTFYPRH 116
261|SequenceR|1313|1301|LQQQHHAQVSPHT
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 4 QHHAQVSPHT 13
QH A +S HT
Sbjct: 339 QHEAAISHHT 348
>sp|UL147_HCMVT|PUTATIVE viral CXC chemokine 2|Human cytomegalovirus (strain Towne)
Query: 1 LQQQHHAQVSPHT 13
L++ HH ++PHT
Sbjct: 3 LRRLHHPILNPHT 15
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 2 QQQHHAQV 9
QQ HHA V
Sbjct: 159 QQSHHAAV 166
>sp|U24_HHV6Z|U24 protein|Human herpesvirus 6B (strain Z29)
Query: 6 HAQVSPH 12
+ QVSPH
Sbjct: 21 YGQVSPH 27
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 QQQHHAQV 9
QQ HHA V
Sbjct: 159 QQSHHAAV 166
>sp|IR03_HCMVA|UNCHARACTERIZED protein IRL3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LQQQHHAQVSP 11
L ++ HA+V P
Sbjct: 18 LARRRHAEVGP 28
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 6 HAQVSPH 12
+AQ+ PH
Sbjct: 2190 YAQIQPH 2196
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 6 HAQVSPH 12
+AQ+ PH
Sbjct: 2187 YAQIQPH 2193
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 6 HAQVSPH 12
+AQ+ PH
Sbjct: 2190 YAQIQPH 2196
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 6 HAQVSPH 12
+AQ+ PH
Sbjct: 2190 YAQIQPH 2196
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 6 HAQVSPH 12
+AQ+ PH
Sbjct: 2190 YAQIQPH 2196
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 6 HAQVSPH 12
+AQ+ PH
Sbjct: 2190 YAQIQPH 2196
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 6 HAQVSPH 12
+AQ+ PH
Sbjct: 2190 YAQIQPH 2196
>sp|GJ_HHV11|ENVELOPE glycoprotein J|Human herpesvirus 1 (strain 17)
Query: 6 HAQVSPH 12
HA VSPH
Sbjct: 37 HAPVSPH 43
>sp|U24_HHV6U|U24 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 7 AQVSPH 12
QVSPH
Sbjct: 22 GQVSPH 27
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 QQQHHAQVSPH 12
+QQ Q+S H
Sbjct: 1691 EQQGQIQISKH 1701
>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)
Query: 6 HAQVSPH 12
HA++ PH
Sbjct: 564 HAEMLPH 570
THE END