1|Sequence|1|10|MRSAAAAPRS
***** No hits found ******
2|Sequence|6|15|AAPRSPAVAT
>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)
Query: 1 AAPRSP 6
AAPR+P
Sbjct: 104 AAPRTP 109
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 4 RSPAVA 9
RSPAVA
Sbjct: 294 RSPAVA 299
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 4 RSPAVA 9
RSPAVA
Sbjct: 295 RSPAVA 300
>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)
Query: 1 AAPRSPAVA 9
A PR PAVA
Sbjct: 96 ACPRRPAVA 104
>sp|GI_HHV23|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain 333)
Query: 1 AAPRSPAVA 9
A PR PAVA
Sbjct: 96 ACPRRPAVA 104
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PRSPAV 8
PRSP+V
Sbjct: 445 PRSPSV 450
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PRSPAV 8
PRSP+V
Sbjct: 445 PRSPSV 450
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PRSPAV 8
PRSP+V
Sbjct: 445 PRSPSV 450
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PRSPAV 8
PRSP+V
Sbjct: 445 PRSPSV 450
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PRSPAV 8
PRSP+V
Sbjct: 445 PRSPSV 450
>sp|GI_HHV11|ENVELOPE glycoprotein I|Human herpesvirus 1 (strain 17)
Query: 1 AAPRSPAVA 9
A PR PAVA
Sbjct: 96 ACPRRPAVA 104
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AAPRSPAVAT 10
+AP SPA AT
Sbjct: 235 SAPTSPAAAT 244
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 3 PRSPAV 8
P+SPAV
Sbjct: 240 PKSPAV 245
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 2 APRSPA 7
APRSP
Sbjct: 329 APRSPG 334
>sp|VP6_ROTGA|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 APRSPAVA 9
AP+ PA++
Sbjct: 310 APKQPAIS 317
>sp|VP6_ROTGI|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Rat/United
Query: 2 APRSPAVA 9
+PR PA++
Sbjct: 310 SPRQPAIS 317
3|Sequence|11|20|PAVATESRRF
***** No hits found ******
4|Sequence|16|25|ESRRFAAARW
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 ESRRFAAARW 10
E+R F ARW
Sbjct: 1898 EARLFFPARW 1907
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 ESRRFAAAR 9
+SR FAA R
Sbjct: 157 QSRYFAAVR 165
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 ESRRFAAAR 9
+SR FAA R
Sbjct: 156 QSRYFAAVR 164
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 1 ESRRFAAARW 10
+SR+F A W
Sbjct: 491 DSRKFENAVW 500
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 ESRRFAAARW 10
ESRR + W
Sbjct: 161 ESRRMIISSW 170
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ESRRFAAARW 10
ESRR + W
Sbjct: 161 ESRRMIISSW 170
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 ESRRFAAAR 9
+SR FAA R
Sbjct: 126 QSRYFAAVR 134
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 1 ESRRFAAARW 10
E+R + A W
Sbjct: 50 ETRTYGVAHW 59
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 3 RRFAAARW 10
RRF + W
Sbjct: 354 RRFVKSNW 361
5|Sequence|21|30|AAARWPGWRS
>sp|VP30_MABVR|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 AARWPGW 8
AA W GW
Sbjct: 231 AALWQGW 237
>sp|VP30_MABVP|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 AARWPGW 8
AA W GW
Sbjct: 231 AALWQGW 237
>sp|VP30_MABVO|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 AARWPGW 8
AA W GW
Sbjct: 231 AALWQGW 237
>sp|VP30_MABVM|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 AARWPGW 8
AA W GW
Sbjct: 231 AALWQGW 237
>sp|VP30_MABVA|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 AARWPGW 8
AA W GW
Sbjct: 231 AALWQGW 237
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 AARWPG 7
A +WPG
Sbjct: 296 ARKWPG 301
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 AARWPG 7
A +WPG
Sbjct: 296 ARKWPG 301
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 4 RWPGW 8
+WP W
Sbjct: 1294 KWPWW 1298
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 4 RWPGW 8
+WP W
Sbjct: 1113 KWPWW 1117
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 5 WPGWR 9
W GWR
Sbjct: 645 WTGWR 649
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 5 WPGWR 9
W GWR
Sbjct: 645 WTGWR 649
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 ARWPGWRS 10
+RW W S
Sbjct: 1083 SRWKSWFS 1090
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 5 WPGWR 9
W GWR
Sbjct: 645 WTGWR 649
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 5 WPGWR 9
W GWR
Sbjct: 645 WTGWR 649
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 5 WPGWR 9
W GWR
Sbjct: 645 WTGWR 649
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 5 WPGWR 9
W GWR
Sbjct: 645 WTGWR 649
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 5 WPGWR 9
W GWR
Sbjct: 645 WTGWR 649
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 5 WPGWR 9
W GWR
Sbjct: 646 WTGWR 650
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 5 WPGWR 9
W GWR
Sbjct: 646 WTGWR 650
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 5 WPGWR 9
W GWR
Sbjct: 646 WTGWR 650
>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United
Query: 6 PGWRS 10
PGW++
Sbjct: 264 PGWKT 268
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 AARWP 6
AARWP
Sbjct: 1251 AARWP 1255
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 1 AAARWPGWR 9
AAA+W WR
Sbjct: 120 AAAQWGLWR 128
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 AARWP 6
AARWP
Sbjct: 1253 AARWP 1257
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 RWPGWRS 10
RW W S
Sbjct: 1084 RWKSWFS 1090
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 RWPGWRS 10
RW W S
Sbjct: 1084 RWKSWFS 1090
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 RWPGWRS 10
RW W S
Sbjct: 1084 RWKSWFS 1090
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 RWPGWRS 10
RW W S
Sbjct: 1084 RWKSWFS 1090
>sp|VFUS_VACC6|14 kDa fusion protein|Vaccinia virus (strain WR 65-16)
Query: 3 ARWPGW 8
ARWP W
Sbjct: 58 ARWPLW 63
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 AAARWPGWRS 10
A WP W++
Sbjct: 470 AVFTWPPWQA 479
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AAARWPGWRS 10
A WP W++
Sbjct: 480 AVFTWPPWQA 489
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AAARWPGWRS 10
A WP W++
Sbjct: 480 AVFTWPPWQA 489
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 AAARWPGWR 9
++A+W WR
Sbjct: 1428 SSAQWIPWR 1436
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 AAARWPGWR 9
++A+W WR
Sbjct: 1428 SSAQWIPWR 1436
6|Sequence|26|35|PGWRSLQRPA
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 WRSLQR 8
WR+LQR
Sbjct: 830 WRALQR 835
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 PGWRSLQR 8
PG++++QR
Sbjct: 628 PGFQNIQR 635
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 PGWRSLQR 8
PG++++QR
Sbjct: 628 PGFQNIQR 635
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 PGWRSLQRP 9
PG+RS+ P
Sbjct: 414 PGYRSISGP 422
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 1 PGWRSLQRP 9
PG+RS+ P
Sbjct: 414 PGYRSISGP 422
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 WRSLQRP 9
WR+ RP
Sbjct: 10 WRNRDRP 16
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 3 WRSLQRP 9
WR+ RP
Sbjct: 10 WRNRDRP 16
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 WRSLQRPA 10
W S Q PA
Sbjct: 1453 WDSTQHPA 1460
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 3 WRSLQRPA 10
W S Q PA
Sbjct: 1452 WDSTQNPA 1459
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 3 WRSLQRPA 10
W S Q PA
Sbjct: 1452 WDSTQNPA 1459
7|Sequence|31|40|LQRPARRSGR
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 RPARRSGR 10
R ARR GR
Sbjct: 2565 RKARREGR 2572
>sp|UL140_HCMVM|PROTEIN UL140|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QRPARRS 8
+RP+RRS
Sbjct: 79 RRPSRRS 85
>sp|VE7_HPV51|PROTEIN E7|Human papillomavirus 51
Query: 2 QRPARRSGR 10
Q P RR+G+
Sbjct: 44 QLPERRAGQ 52
8|Sequence|36|45|RRSGRGGGGA
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 5 RGGGGA 10
+GGGGA
Sbjct: 157 KGGGGA 162
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 2 RSGRGGGG 9
+S RG GG
Sbjct: 724 KSRRGAGG 731
9|Sequence|41|50|GGGGAAPGPY
>sp|CEP1_EBVG|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GGAAPGPY 10
G A PGP+
Sbjct: 174 GAATPGPW 181
>sp|CEP1_EBVB9|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GGAAPGPY 10
G A PGP+
Sbjct: 174 GAATPGPW 181
>sp|CEP1_EBVA8|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 GGAAPGPY 10
G A PGP+
Sbjct: 174 GAATPGPW 181
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GGGGAAPG 8
GGGG PG
Sbjct: 206 GGGGPRPG 213
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 GGGGAAPGPY 10
G GG GPY
Sbjct: 281 GSGGFTYGPY 290
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 2 GGGAAPGP 9
G GAAP P
Sbjct: 19 GAGAAPIP 26
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 2 GGGAAPGP 9
G GAAP P
Sbjct: 19 GAGAAPIP 26
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 GGGGAAPGP 9
GG AAPGP
Sbjct: 2105 GGDAAAPGP 2113
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 GGGGAAPGP 9
GGG + P P
Sbjct: 36 GGGASPPSP 44
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 AAPGP 9
AAPGP
Sbjct: 575 AAPGP 579
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 AAPGP 9
AAPGP
Sbjct: 575 AAPGP 579
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 GGGGAAPGPY 10
G G + GPY
Sbjct: 283 GSGAFSHGPY 292
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 1 GGGGAAPGPY 10
G G + GPY
Sbjct: 282 GSGAFSHGPY 291
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 GGGGAAPGPY 10
G G + GPY
Sbjct: 283 GSGAFSHGPY 292
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GGGGAA 6
GGGGA+
Sbjct: 177 GGGGAS 182
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GGGGAA 6
GGGGA+
Sbjct: 177 GGGGAS 182
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 GGGGAAPG 8
GGG PG
Sbjct: 23 GGGAIIPG 30
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 1 GGGGAAPG 8
GGG PG
Sbjct: 23 GGGAIIPG 30
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 GGGAAPGP 9
GGA P P
Sbjct: 613 AGGAVPWP 620
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 GGGGAAPGP 9
G GGAA P
Sbjct: 431 GAGGAADAP 439
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 GGGGAAPGP 9
G GGAA P
Sbjct: 431 GAGGAADAP 439
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 3 GGAAPGPY 10
GG+ P P+
Sbjct: 466 GGSCPKPH 473
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 3 GGAAPGPY 10
GG+ P P+
Sbjct: 466 GGSCPKPH 473
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 GGGGAAPG 8
GGG PG
Sbjct: 23 GGGAIIPG 30
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 GGGAAP 7
GGG+AP
Sbjct: 2520 GGGSAP 2525
>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22
Query: 2 GGGAAP 7
GGG AP
Sbjct: 320 GGGVAP 325
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 1 GGGGAAP 7
GGG AP
Sbjct: 335 AGGGVAP 341
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 4 GAAPGPY 10
GA P PY
Sbjct: 634 GAVPHPY 640
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 GGGGAAPGPY 10
G G GPY
Sbjct: 280 GSGAFTYGPY 289
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 3 GGAAPGP 9
GGA+ GP
Sbjct: 146 GGASTGP 152
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 2 GGGAAPGP 9
G A PGP
Sbjct: 463 GEAATPGP 470
>sp|VE2_HPV23|REGULATORY protein E2|Human papillomavirus 23
Query: 2 GGGAAP 7
GGG AP
Sbjct: 315 GGGVAP 320
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 3 GGAAPGP 9
GGA+ GP
Sbjct: 316 GGASTGP 322
10|Sequence|46|55|APGPYPSAAP
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PGPYPSAA 9
P PYPS++
Sbjct: 803 PSPYPSSS 810
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PGPYPSAA 9
P PYPS++
Sbjct: 803 PSPYPSSS 810
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 1 APGPYPS 7
APG YP+
Sbjct: 324 APGNYPA 330
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 APGPYPS 7
APG YP+
Sbjct: 325 APGNYPA 331
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 APGPYPS 7
APG YP+
Sbjct: 325 APGNYPA 331
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 1 APGPYPS 7
APG YP+
Sbjct: 325 APGNYPA 331
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 APGPYPSAAP 10
A P P AAP
Sbjct: 437 ATTPVPPAAP 446
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 APGPYPSAAP 10
A P P AAP
Sbjct: 437 ATTPVPPAAP 446
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 3 GPYPS 7
GPYP+
Sbjct: 289 GPYPN 293
>sp|NCAP_NIPAV|NUCLEOPROTEIN virus
Query: 1 APGPYP 6
APG YP
Sbjct: 323 APGGYP 328
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 3 GPYP 6
GPYP
Sbjct: 289 GPYP 292
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 PYPSAA 9
PYP+A+
Sbjct: 1919 PYPNAS 1924
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 PYPSAA 9
PYP+A+
Sbjct: 1919 PYPNAS 1924
>sp|NCAP_HENDH|NUCLEOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 APGPYP 6
APG YP
Sbjct: 323 APGGYP 328
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 PGPYPSAAP 10
P P P+A P
Sbjct: 232 PSPLPTARP 240
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 PGPYPSAAP 10
PG PS+ P
Sbjct: 38 PGDNPSSEP 46
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 3 GPYP 6
GPYP
Sbjct: 290 GPYP 293
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 APGPYPSA 8
+PGP P+
Sbjct: 215 SPGPMPAG 222
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2
Query: 1 APGPYPSAA 9
AP P P+A+
Sbjct: 26 APSPSPTAS 34
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 3 GPYP 6
GPYP
Sbjct: 290 GPYP 293
>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)
Query: 2 PGPYPSAAP 10
PGP P A P
Sbjct: 435 PGPVPDAEP 443
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 APGPYPSA 8
+PGP P+
Sbjct: 215 SPGPMPAG 222
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 1 APGPYPSAA 9
AP P PSAA
Sbjct: 657 APDPQPSAA 665
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 APGPYP 6
APGP P
Sbjct: 658 APGPAP 663
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 4 PYPSAAP 10
P+P A+P
Sbjct: 585 PFPFASP 591
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 PGPYPSAAP 10
P P P+A P
Sbjct: 232 PPPLPTARP 240
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 PGPYPSAAP 10
PG PSAAP
Sbjct: 634 PGGAPSAAP 642
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 PGPYPSAAP 10
PG PSAAP
Sbjct: 634 PGGAPSAAP 642
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 APGPYP 6
APGP P
Sbjct: 659 APGPAP 664
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 4 PYPSAAP 10
P+P A+P
Sbjct: 585 PFPFASP 591
>sp|PHOSP_VSNJM|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 2 PGPYPSA 8
PGP P +
Sbjct: 194 PGPAPKS 200
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 1 APGPYPS 7
AP PY S
Sbjct: 166 APSPYNS 172
11|Sequence|51|60|PSAAPPPPGP
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 AAPPPPG 9
A PPPPG
Sbjct: 2863 APPPPPG 2869
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 AAPPPPG 9
AA PPPG
Sbjct: 6045 AARPPPG 6051
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 APPPPGP 10
APPPP P
Sbjct: 13 APPPPRP 19
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 APPPPGP 10
APPPP P
Sbjct: 13 APPPPRP 19
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 AAPPPPG 9
+A PPPG
Sbjct: 6062 SAKPPPG 6068
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 APPPPG 9
A PPPG
Sbjct: 6040 AKPPPG 6045
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 3 AAPPPPGP 10
A PPP P
Sbjct: 1221 AVTPPPKP 1228
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 SAAPPPP 8
+AAPP P
Sbjct: 622 AAAPPEP 628
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 2 SAAPPPP 8
SA PPPP
Sbjct: 16 SAQPPPP 22
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 APPPPG 9
APP PG
Sbjct: 443 APPIPG 448
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 4 APPPPG 9
APPPP
Sbjct: 1423 APPPPA 1428
>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)
Query: 1 PSAAPPPP 8
P A PP P
Sbjct: 312 PDADPPIP 319
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PSAAPPPP 8
P A PP P
Sbjct: 312 PDADPPIP 319
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 3 AAPPPPGP 10
AAP PP P
Sbjct: 2095 AAPTPPVP 2102
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 3 AAPPPPGP 10
AAP PP P
Sbjct: 2094 AAPTPPVP 2101
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 3 AAPPPPGP 10
AAP PP P
Sbjct: 2094 AAPTPPVP 2101
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 PSAAPPPP 8
P+ APP P
Sbjct: 602 PTVAPPAP 609
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 PSAAPPPP 8
P+ APP P
Sbjct: 602 PTVAPPAP 609
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 2 SAAPPPPG 9
SAAP PG
Sbjct: 28 SAAPSSPG 35
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 2 SAAPPPPG 9
SAAP PG
Sbjct: 29 SAAPSSPG 36
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 PSAAPPPP 8
P+ APP P
Sbjct: 602 PTVAPPAP 609
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 PSAAPPPP 8
P+ APP P
Sbjct: 602 PTVAPPAP 609
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 6 PPPG 9
PPPG
Sbjct: 205 PPPG 208
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 6 PPPGP 10
PPPGP
Sbjct: 40 PPPGP 44
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 2 SAAPPPPG 9
SAAP PG
Sbjct: 29 SAAPSSPG 36
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 SAAPPPPGP 10
++APP P P
Sbjct: 1815 ASAPPVPKP 1823
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 1 PSAAPPPP 8
P+ APP P
Sbjct: 602 PTVAPPAP 609
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 2 SAAPPPPG 9
SAAP PG
Sbjct: 29 SAAPTSPG 36
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 3 AAPPPPG 9
A PPP G
Sbjct: 131 AQPPPNG 137
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 3 AAPPPPGP 10
AAPP PGP
Sbjct: 350 AAPPHPGP 357
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 6 PPPG 9
PPPG
Sbjct: 14 PPPG 17
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 AAPPPPGP 10
A P P GP
Sbjct: 149 AIPTPKGP 156
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PSAAPPPPG 9
P+ P PPG
Sbjct: 216 PAMGPLPPG 224
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 6 PPPG 9
PPPG
Sbjct: 14 PPPG 17
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 6 PPPG 9
PPPG
Sbjct: 14 PPPG 17
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 PPPG 9
PPPG
Sbjct: 14 PPPG 17
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 6 PPPG 9
PPPG
Sbjct: 14 PPPG 17
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 1 PSAAPPP 7
P AA PP
Sbjct: 348 PGAAGPP 354
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 AAPPPPG 9
A P PPG
Sbjct: 216 AGPAPPG 222
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 6 PPPG 9
PPPG
Sbjct: 14 PPPG 17
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 AAPPPPG 9
A PPPG
Sbjct: 604 ARDPPPG 610
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 AAPPPPG 9
A PPPG
Sbjct: 604 ARDPPPG 610
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 AAPPPPG 9
A PPPG
Sbjct: 604 ARDPPPG 610
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 5 PPPPG 9
PPPP
Sbjct: 1464 PPPPA 1468
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 5 PPPPG 9
PPPP
Sbjct: 1444 PPPPA 1448
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 1 PSAAPPP 7
P+A PPP
Sbjct: 431 PTALPPP 437
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 5 PPPPG 9
PPPP
Sbjct: 1454 PPPPA 1458
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 1 PSAAPPP 7
P+A PPP
Sbjct: 431 PTALPPP 437
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 5 PPPPG 9
PPPP
Sbjct: 1445 PPPPA 1449
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 1 PSAAPPP 7
P+A PPP
Sbjct: 431 PTALPPP 437
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 1 PSAAPPP 7
P+A PPP
Sbjct: 431 PTALPPP 437
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 1 PSAAPPP 7
P+A PPP
Sbjct: 431 PTALPPP 437
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 4 APPPPG 9
+PPPP
Sbjct: 1430 SPPPPA 1435
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 5 PPPPG 9
PPPP
Sbjct: 1417 PPPPA 1421
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 5 PPPPG 9
PPPP
Sbjct: 1448 PPPPA 1452
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 5 PPPPG 9
PPPP
Sbjct: 1420 PPPPA 1424
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 5 PPPPG 9
PPPP
Sbjct: 1456 PPPPA 1460
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 5 PPPPG 9
PPPP
Sbjct: 1443 PPPPA 1447
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 1 PSAAPPP 7
PSA PP
Sbjct: 338 PSAIQPP 344
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 5 PPPPG 9
PPPP
Sbjct: 1455 PPPPA 1459
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 5 PPPPG 9
PPPP
Sbjct: 1445 PPPPA 1449
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 5 PPPP 8
PPPP
Sbjct: 1462 PPPP 1465
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 PSAAPPP 7
P AA PP
Sbjct: 348 PGAAGPP 354
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 5 PPPPG 9
PPPP
Sbjct: 1454 PPPPA 1458
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 5 PPPPG 9
PPPP
Sbjct: 1457 PPPPA 1461
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 5 PPPP 8
PPPP
Sbjct: 123 PPPP 126
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 5 PPPPG 9
PPPP
Sbjct: 1446 PPPPA 1450
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 AAPPPPG 9
A P PPG
Sbjct: 220 AGPIPPG 226
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 2 SAAPPPPGP 10
+A P PP P
Sbjct: 619 AALPRPPSP 627
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 5 PPPPG 9
PPPP
Sbjct: 1446 PPPPA 1450
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 5 PPPP 8
PPPP
Sbjct: 1446 PPPP 1449
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 AAPPPPG 9
A P PPG
Sbjct: 216 AGPIPPG 222
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 SAAPPPPGP 10
SA P PPGP
Sbjct: 2725 SALPLPPGP 2733
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 AAPPPPG 9
A P PPG
Sbjct: 226 AGPIPPG 232
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 AAPPPPG 9
A P PPG
Sbjct: 220 AGPIPPG 226
12|Sequence|56|65|PPPGPGPPPS
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 2 PPGPGPPPS 10
PPGP P PS
Sbjct: 296 PPGPDPGPS 304
Query: 1 PPPGPGP 7
P P PGP
Sbjct: 297 PGPDPGP 303
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 GPGPPPS 10
GPGPP S
Sbjct: 825 GPGPPSS 831
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GPGPPPS 10
GPGPP S
Sbjct: 825 GPGPPSS 831
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GPGPPPS 10
GPGPP S
Sbjct: 824 GPGPPSS 830
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PPGPGPPPS 10
PPGP P PS
Sbjct: 296 PPGPDPGPS 304
Query: 1 PPPGPGP 7
P P PGP
Sbjct: 297 PGPDPGP 303
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 3 PGPGPPP 9
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 PPPGPGP 7
P PGP P
Sbjct: 224 PNPGPRP 230
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 3 PGPGPPP 9
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 PPPGPGP 7
P PGP P
Sbjct: 224 PNPGPRP 230
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 3 PGPGPPP 9
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 PPPGPGP 7
P PGP P
Sbjct: 224 PNPGPRP 230
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 3 PGPGPPP 9
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 PPPGPGP 7
P PGP P
Sbjct: 224 PNPGPRP 230
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 3 PGPGPPP 9
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 PPPGPGP 7
P PGP P
Sbjct: 224 PNPGPRP 230
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 3 PGPGPPP 9
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 PPPGPGP 7
P PGP P
Sbjct: 224 PNPGPRP 230
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 3 PGPGPPP 9
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 PPPGPGP 7
P PGP P
Sbjct: 224 PNPGPRP 230
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 3 PGPGPPP 9
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 PPPGPGP 7
P PGP P
Sbjct: 224 PNPGPRP 230
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 3 PGPGPPP 9
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 PPPGPGP 7
P PGP P
Sbjct: 224 PNPGPRP 230
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 3 PGPGPPP 9
P PGP P
Sbjct: 224 PNPGPRP 230
Query: 1 PPPGPGP 7
P PGP P
Sbjct: 224 PNPGPRP 230
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 PPGPGPPP 9
PPG G PP
Sbjct: 469 PPGAGVPP 476
Query: 1 PPPGPGP 7
PP GP P
Sbjct: 720 PPGGPVP 726
>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 1 PPPGPGPP 8
PP G PP
Sbjct: 65 PPGGKAPP 72
Query: 2 PPGPGPPP 9
PPG PP
Sbjct: 65 PPGGKAPP 72
>sp|HBZ_HTL1A|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 2 PPGPGPPP 9
PPG PP
Sbjct: 65 PPGEKAPP 72
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 PPPGPG 6
PPP PG
Sbjct: 2864 PPPPPG 2869
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PPGPGPPP 9
PP PG P
Sbjct: 363 PPNPGGDP 370
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 3 PGPGPPP 9
P GPPP
Sbjct: 23 PYTGPPP 29
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 3 PGPGPPP 9
P GPPP
Sbjct: 23 PYTGPPP 29
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 3 PGPGPPP 9
P GPPP
Sbjct: 23 PYTGPPP 29
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 PPPGPGPP 8
PPPG PP
Sbjct: 182 PPPGSCPP 189
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 PPGPGPPPS 10
PPG PP S
Sbjct: 466 PPGADPPKS 474
Query: 1 PPPGPGP 7
PP GP P
Sbjct: 716 PPGGPVP 722
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 PPGPGPPPS 10
PPG PP S
Sbjct: 476 PPGAQPPTS 484
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 PPPGPG 6
P PGPG
Sbjct: 3070 PRPGPG 3075
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 PPGPGPPPS 10
PPG G P S
Sbjct: 466 PPGAGAPDS 474
Query: 1 PPPGPGP 7
PP GP P
Sbjct: 716 PPGGPVP 722
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 PPGPGPPPS 10
PPG PP S
Sbjct: 476 PPGAQPPTS 484
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 PPPGPGPP 8
PPPG PP
Sbjct: 182 PPPGSCPP 189
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 1 PPPGPGPPP 9
P P PPP
Sbjct: 45 PRLQPSPPP 53
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PPPGPGPPP 9
P P PPP
Sbjct: 45 PRLQPSPPP 53
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 PPGPGPPPS 10
PPG G P S
Sbjct: 466 PPGAGAPKS 474
Query: 1 PPPGPGP 7
PP GP P
Sbjct: 714 PPGGPVP 720
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 PPGPGPPPS 10
PPG G P S
Sbjct: 466 PPGAGAPDS 474
Query: 1 PPPGPGP 7
PP GP P
Sbjct: 716 PPGGPVP 722
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PGPGPPP 9
P P PPP
Sbjct: 292 PTPAPPP 298
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PPPGPG 6
PPPG G
Sbjct: 607 PPPGAG 612
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PPPGPG 6
PPPG G
Sbjct: 607 PPPGAG 612
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PPPGPG 6
PPPG G
Sbjct: 607 PPPGAG 612
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 PPGPGPPPS 10
PPG PP +
Sbjct: 466 PPGANPPKT 474
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 3 PGPGPPPS 10
PGPG PS
Sbjct: 266 PGPGETPS 273
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 PPPGPGPPP 9
P PG PP
Sbjct: 346 PAPGAAGPP 354
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 1 PPPGPGP 7
PPP P P
Sbjct: 50 PPPVPSP 56
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 1 PPPGPGP 7
PPP P P
Sbjct: 50 PPPVPSP 56
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 PPGPGPP 8
PPG PP
Sbjct: 476 PPGAKPP 482
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 PPGPGPP 8
PPG PP
Sbjct: 477 PPGADPP 483
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 1 PPPGPGPPP 9
P PG PP
Sbjct: 346 PVPGAAGPP 354
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 PPGPGPPPS 10
PPG PP +
Sbjct: 475 PPGAKPPTT 483
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 PPGPGPP 8
P GPG P
Sbjct: 5 PGGPGKP 11
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 PPGPGPP 8
PPG PP
Sbjct: 477 PPGADPP 483
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 PPGPGPP 8
PPG G P
Sbjct: 1815 PPGRGDP 1821
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 3 PGPGPPP 9
P PG PP
Sbjct: 387 PAPGSPP 393
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 3 PGPGPPP 9
P P PPP
Sbjct: 292 PTPEPPP 298
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 PPGPGPPPS 10
PPG G P +
Sbjct: 467 PPGAGAPKT 475
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 PPGPGPP 8
PPG G P
Sbjct: 1815 PPGRGDP 1821
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PGPGPPPS 10
P PGP P+
Sbjct: 214 PSPGPMPA 221
Query: 1 PPPGPGP 7
P PGP P
Sbjct: 214 PSPGPMP 220
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 PGPPP 9
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 PGPPP 9
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 PGPPP 9
P PPP
Sbjct: 1483 PSPPP 1487
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PGPGPPPS 10
PGPGPP S
Sbjct: 32 PGPGPPSS 39
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 PPGPGPPPS 10
PPG G P S
Sbjct: 466 PPGAGVPGS 474
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 PGPPP 9
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 5 PGPPP 9
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 PGPPP 9
P PPP
Sbjct: 1483 PSPPP 1487
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PGPGPPPS 10
PGPGPP S
Sbjct: 32 PGPGPPSS 39
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PPPGPGPPPS 10
PP P PP +
Sbjct: 935 PPDAPMPPAT 944
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 PGPPP 9
P PPP
Sbjct: 1483 PSPPP 1487
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPPGPGPPPS 10
PP P PP +
Sbjct: 935 PPDAPMPPAT 944
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 6 GPPP 9
GPPP
Sbjct: 32 GPPP 35
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 PPGPGPPPS 10
PPG G P S
Sbjct: 523 PPGAGKPTS 531
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 PPGPGPPPS 10
PPG G P S
Sbjct: 523 PPGAGKPTS 531
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PGPGPPPS 10
P PGP P+
Sbjct: 214 PSPGPMPA 221
Query: 1 PPPGPGP 7
P PGP P
Sbjct: 214 PSPGPMP 220
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 2 PPGPGPPPS 10
PPG G P S
Sbjct: 523 PPGAGKPTS 531
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPPGPGPPPS 10
PP P PP +
Sbjct: 935 PPDAPVPPAT 944
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 PPGPGPP 8
PPG G P
Sbjct: 466 PPGAGVP 472
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 PGPGPPP 9
P P PPP
Sbjct: 1763 PAPIPPP 1769
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 PPGPGPPPS 10
PPG G P S
Sbjct: 521 PPGAGKPTS 529
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PGPGPPP 9
PG PPP
Sbjct: 420 PGDSPPP 426
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PGPGPPP 9
PG PPP
Sbjct: 420 PGDSPPP 426
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 PPGPGPPPS 10
PPG G P S
Sbjct: 523 PPGAGKPTS 531
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 PGPGPPP 9
P P PPP
Sbjct: 1766 PAPIPPP 1772
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 PPGPGPPPS 10
PPG G P +
Sbjct: 545 PPGAGEPKT 553
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 PPGPGPPPS 10
PPG G P S
Sbjct: 465 PPGIGKPRS 473
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 PGPPP 9
P PPP
Sbjct: 1073 PSPPP 1077
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PPGPG 6
PP PG
Sbjct: 321 PPAPG 325
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 5 PGPP 8
PGPP
Sbjct: 15 PGPP 18
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 6 GPPPS 10
GPPPS
Sbjct: 598 GPPPS 602
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 PPPGPGP 7
PP GP P
Sbjct: 717 PPGGPFP 723
>sp|CEP1_HHV11|CYTOPLASMIC envelopment protein 1|Human herpesvirus 1 (strain 17)
Query: 5 PGPPP 9
PGPPP
Sbjct: 245 PGPPP 249
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 4 GPGPPP 9
G GPPP
Sbjct: 33 GRGPPP 38
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain
Query: 4 GPGPPP 9
G GPPP
Sbjct: 33 GRGPPP 38
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 PPGPGPP 8
PPG G P
Sbjct: 468 PPGAGVP 474
Query: 1 PPPGPGP 7
PP GP P
Sbjct: 715 PPGGPVP 721
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 2 PPGPGPPPS 10
P GPGP S
Sbjct: 200 PRGPGPAKS 208
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPPGPGPPPS 10
PP P P S
Sbjct: 25 PPTSPAPSTS 34
>sp|PHOSP_RABVC|PHOSPHOPROTEIN virus (strain CVS-11) (RABV)
Query: 4 GPGPP 8
PGPP
Sbjct: 178 APGPP 182
>sp|PHOSP_RABVA|PHOSPHOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 4 GPGPP 8
PGPP
Sbjct: 178 APGPP 182
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 4 GPGPPP 9
G GPPP
Sbjct: 33 GRGPPP 38
>sp|PHOSP_RABVR|PHOSPHOPROTEIN virus (strain China/MRV) (RABV)
Query: 4 GPGPP 8
PGPP
Sbjct: 178 APGPP 182
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 PPPGPGPPP 9
P P PPP
Sbjct: 785 PAPFYSPPP 793
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 PPPGPGPPPS 10
PP P P S
Sbjct: 25 PPTSPAPSTS 34
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 4 GPGPPPS 10
P PPP+
Sbjct: 26 APSPPPT 32
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 PPPGPGPPPS 10
PP GPP S
Sbjct: 58 PPTSGGPPAS 67
>sp|BLRF2_EBVB9|TEGUMENT protein BLRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PPPGPGPPP 9
P PG G P
Sbjct: 126 PSPGEGTRP 134
>sp|BLRF2_EBVA8|TEGUMENT protein BLRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PPPGPGPPP 9
P PG G P
Sbjct: 126 PSPGEGTRP 134
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 PPPGPGPPPS 10
PPG G P S
Sbjct: 466 TPPGAGEPQS 475
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 2 PPGPGPPPS 10
PP G PP+
Sbjct: 510 PPTAGQPPA 518
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PPGPGPPPS 10
PP G PP+
Sbjct: 510 PPTAGQPPA 518
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 PPGPGPPPS 10
PPG P P+
Sbjct: 444 PPGSSPGPT 452
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 PPPGPGPPPS 10
PPG G P S
Sbjct: 470 TPPGVGKPKS 479
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 PPPGPG 6
PPPGP
Sbjct: 158 PPPGPA 163
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 2 PPGPGPPPS 10
PPG G P S
Sbjct: 523 PPGAGKPTS 531
13|Sequence|61|70|GPPPSRQSSP
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PPPSRQSSP 10
PPPSRQ+ P
Sbjct: 613 PPPSRQTKP 621
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPPSRQSSP 10
PPPSRQ+ P
Sbjct: 612 PPPSRQTKP 620
>sp|DNBI_ADE07|PROBABLE DNA-binding protein|Human adenovirus B serotype 7
Query: 4 PSRQSSP 10
PSR++SP
Sbjct: 99 PSREASP 105
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 2 PPPSRQ 7
PPP RQ
Sbjct: 249 PPPKRQ 254
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 1 GPPPSRQSSP 10
PPPSR+ P
Sbjct: 121 APPPSREHVP 130
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 GPPPSRQSSP 10
G PP+R S P
Sbjct: 766 GAPPARISVP 775
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 GPPPSRQSSP 10
G PP+R S P
Sbjct: 766 GAPPARISVP 775
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GPPPSRQS 8
PPP R S
Sbjct: 13 APPPPRPS 20
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GPPPSRQS 8
PPP R S
Sbjct: 13 APPPPRPS 20
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 3 PPSRQSSP 10
PP+RQ+ P
Sbjct: 2531 PPARQADP 2538
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 3 PPSRQSSP 10
PP+R SSP
Sbjct: 160 PPTRDSSP 167
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PPPSRQSSP 10
PP S +S+P
Sbjct: 483 PPQSGRSTP 491
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 2 PPPSRQSSP 10
PP S +S+P
Sbjct: 483 PPQSDRSTP 491
14|Sequence|66|75|RQSSPPSASD
>sp|TAT_HV192|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 RQSSPPSASD 10
R+S+PPS+ D
Sbjct: 55 RRSAPPSSED 64
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 SSPPSASD 10
++PP A+D
Sbjct: 1790 ATPPGATD 1797
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 SSPPSASD 10
++PP A+D
Sbjct: 1790 ATPPGATD 1797
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 SSPPSASD 10
++PP A+D
Sbjct: 1790 ATPPGATD 1797
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 2 QSSPPSASD 10
+ SPPSAS+
Sbjct: 412 EDSPPSASN 420
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 QSSPPSASD 10
+ SPPSAS+
Sbjct: 412 EDSPPSASN 420
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 QSSPPSASD 10
+ SPPSAS+
Sbjct: 412 EDSPPSASN 420
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 QSSPPSAS 9
Q +PPSAS
Sbjct: 1824 QVAPPSAS 1831
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 RQSSPPSAS 9
+ PPSAS
Sbjct: 486 KSHKPPSAS 494
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 QSSPPSA 8
+S PPSA
Sbjct: 487 KSKPPSA 493
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 4 SPPSASD 10
+PP+A+D
Sbjct: 717 NPPAATD 723
15|Sequence|71|80|PSASDCFGSN
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 3 ASDCFGSN 10
A++CFG +
Sbjct: 734 AANCFGQH 741
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 ASDCFGSN 10
A++CFG +
Sbjct: 734 AANCFGQH 741
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 ASDCFGSN 10
A++CFG +
Sbjct: 726 AANCFGQH 733
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 3 ASDCFGSN 10
A++CFG +
Sbjct: 734 AANCFGQH 741
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 ASDCFGSN 10
A++CFG +
Sbjct: 734 AANCFGQH 741
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 3 ASDCFGSN 10
A++CFG +
Sbjct: 734 AANCFGQH 741
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 3 ASDCFGSN 10
A++CFG +
Sbjct: 734 AANCFGQH 741
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 3 ASDCFGSN 10
A++CFG +
Sbjct: 734 AANCFGQH 741
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 3 ASDCFGSN 10
A++CFG +
Sbjct: 734 AANCFGQH 741
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 PSASDCFGSN 10
PS +C SN
Sbjct: 931 PSGEECPNSN 940
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 PSASDCFG 8
PS CFG
Sbjct: 244 PSTRRCFG 251
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 PSASDCFG 8
PS CFG
Sbjct: 251 PSTRRCFG 258
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 SASDCF 7
+A+DCF
Sbjct: 384 AANDCF 389
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 2 SASDCF 7
+A+DCF
Sbjct: 384 AANDCF 389
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 SASDCF 7
+A+DCF
Sbjct: 384 AANDCF 389
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 SASDCF 7
+A+DCF
Sbjct: 384 AANDCF 389
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 SASDCF 7
+A+DCF
Sbjct: 373 AANDCF 378
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 SASDCF 7
+A+DCF
Sbjct: 390 AANDCF 395
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 SASDCF 7
+A+DCF
Sbjct: 373 AANDCF 378
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 SASDCF 7
+A+DCF
Sbjct: 386 AANDCF 391
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 SASDCF 7
+A+DCF
Sbjct: 373 AANDCF 378
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 2 SASDCF 7
+A+DCF
Sbjct: 374 AANDCF 379
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 SASDCF 7
+A+DCF
Sbjct: 374 AANDCF 379
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 SASDCF 7
+A+DCF
Sbjct: 381 AANDCF 386
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 SASDCF 7
+A+DCF
Sbjct: 384 AANDCF 389
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 2 SASDCF 7
+A+DCF
Sbjct: 374 AANDCF 379
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 PSASDCFGS 9
PS CF S
Sbjct: 1419 PSVFKCFAS 1427
16|Sequence|76|85|CFGSNGNGGG
>sp|UL120_HCMVM|MEMBRANE protein UL120|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CFGSNGNGGG 10
C+GSNG G
Sbjct: 119 CWGSNGTFGA 128
>sp|UL120_HCMVA|UNCHARACTERIZED protein UL120|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CFGSNGNGGG 10
C+GSNG G
Sbjct: 118 CWGSNGTFGA 127
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 CFGSNGN 7
C G NGN
Sbjct: 285 CLGQNGN 291
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 CFGSNGN 7
C G NGN
Sbjct: 285 CLGQNGN 291
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 1 CFGSNGNGGG 10
C G++G+G G
Sbjct: 4 CEGTDGDGSG 13
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 4 SNGNGGG 10
+NGNG G
Sbjct: 443 ANGNGSG 449
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 CFGSNGNGGG 10
CFG +G G
Sbjct: 249 CFGVEPSGSG 258
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 CFGSNGNGGG 10
CFG +G G
Sbjct: 256 CFGVEPSGSG 265
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 CFGSNGNGGG 10
CFG +G G
Sbjct: 256 CFGVEPSGSG 265
>sp|RP18_VACCA|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CFGSNGNG 8
CF NGN
Sbjct: 123 CFFRNGNA 130
>sp|RP18_MONPV|DNA-DIRECTED RNA polymerase 18 kDa|Monkeypox virus (MPXV)
Query: 1 CFGSNGNG 8
CF NGN
Sbjct: 123 CFFRNGNA 130
>sp|RP18_VACCC|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CFGSNGNG 8
CF NGN
Sbjct: 123 CFFRNGNA 130
>sp|RP18_VARV|DNA-DIRECTED RNA polymerase 18 kDa|Variola virus
Query: 1 CFGSNGNG 8
CF NGN
Sbjct: 123 CFFRNGNA 130
>sp|RP18_VAR67|DNA-DIRECTED RNA polymerase 18 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 CFGSNGNG 8
CF NGN
Sbjct: 123 CFFRNGNA 130
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 CFGSNGNGGG 10
C G++G G G
Sbjct: 3 CEGTDGEGLG 12
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 5 NGNGGG 10
NG GGG
Sbjct: 401 NGGGGG 406
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 3 GSNGNGGG 10
G+NG G G
Sbjct: 6 GTNGVGAG 13
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 1 CFGSNGNG 8
CF NG G
Sbjct: 387 CFPLNGQG 394
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 2 FGSNGNG 8
FG+ GNG
Sbjct: 811 FGNFGNG 817
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 4 SNGNGG 9
S GNGG
Sbjct: 266 SRGNGG 271
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GSNGNGG 9
GSN GG
Sbjct: 416 GSNNTGG 422
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 CFGSNGNGGG 10
CF + N GG
Sbjct: 775 CFRTLDNSGG 784
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GSNGNGG 9
GSN GG
Sbjct: 398 GSNNTGG 404
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GSNGNGG 9
GSN GG
Sbjct: 411 GSNNTGG 417
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 3 GSNGNGG 9
GS+ NGG
Sbjct: 142 GSSQNGG 148
17|Sequence|81|90|GNGGGAFRPG
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 NGGGAFRPG 10
NGG F+PG
Sbjct: 4708 NGGFYFKPG 4716
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 NGGGAFRPG 10
NGG F+PG
Sbjct: 4733 NGGFYFKPG 4741
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGGGAFRPG 10
NG FRPG
Sbjct: 463 NGSEIFRPG 471
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGGGAFRPG 10
NG FRPG
Sbjct: 463 NGSEIFRPG 471
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGGGAFRPG 10
NG FRPG
Sbjct: 468 NGSEIFRPG 476
>sp|P30II_HTL1A|ACCESSORY protein p30II|Human T-cell leukemia virus 1
Query: 4 GGAFRPG 10
GGAF PG
Sbjct: 84 GGAFSPG 90
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GGGAFRPG 10
GGG RPG
Sbjct: 206 GGGGPRPG 213
>sp|P30II_HTL1C|ACCESSORY protein p30II|Human T-cell leukemia virus 1
Query: 4 GGAFRPG 10
GGAF PG
Sbjct: 84 GGAFPPG 90
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 2 NGGGAFRP 9
N GG +RP
Sbjct: 427 NDGGNWRP 434
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 2 NGGGAFRP 9
N GG +RP
Sbjct: 427 NDGGNWRP 434
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 2 NGGGAFR 8
+GG AFR
Sbjct: 460 DGGSAFR 466
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 1 GNGGGAFRPG 10
G G GA RP
Sbjct: 140 GEGDGAPRPA 149
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GNGGGAF 7
NGGG F
Sbjct: 236 ANGGGRF 242
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 NGGGAFRP 9
+GG FRP
Sbjct: 3666 SGGVQFRP 3673
>sp|HBSAG_HBVC8|LARGE envelope protein|Hepatitis B virus genotype C
Query: 3 GGGAFRPG 10
G GAF PG
Sbjct: 48 GAGAFGPG 55
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 4 GGAFRPG 10
GG RPG
Sbjct: 75 GGGGRPG 81
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 2 NGGGAFRPG 10
+GGG F G
Sbjct: 105 DGGGVFTRG 113
>sp|NS1_I96A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 NGGGAFRP 9
NGG F P
Sbjct: 209 NGGPPFTP 216
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 381 GNGCGLFGKG 390
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 381 GNGCGLFGKG 390
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 381 GNGCGLFGKG 390
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 381 GNGCGLFGKG 390
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 381 GNGCGLFGKG 390
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|HBSAG_HBVC0|LARGE envelope protein|Hepatitis B virus genotype C
Query: 3 GGGAFRPG 10
G GAF PG
Sbjct: 59 GAGAFGPG 66
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 374 GNGCGLFGKG 383
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 102 GNGCGLFGKG 111
>sp|HBSAG_HBVC2|LARGE envelope protein|Hepatitis B virus genotype C
Query: 3 GGGAFRPG 10
G GAF PG
Sbjct: 59 GAGAFGPG 66
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 151 GNGCGLFGKG 160
>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C
Query: 3 GGGAFRPG 10
G GAF PG
Sbjct: 59 GAGAFGPG 66
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 282 GNGCGLFGKG 291
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 4 GGAFRPG 10
GG F PG
Sbjct: 146 GGTFGPG 152
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 392 GNGCGLFGKG 401
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 392 GNGCGLFGKG 401
>sp|HBSAG_HBVC3|LARGE envelope protein|Hepatitis B virus genotype C
Query: 3 GGGAFRPG 10
G GAF PG
Sbjct: 59 GAGAFGPG 66
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 392 GNGCGLFGKG 401
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 394 GNGCGLFGKG 403
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 387 GNGCGLFGKG 396
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 324 GNGCGLFGKG 333
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 396 GNGCGLFGKG 405
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 387 GNGCGLFGKG 396
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 4 GGAFRPG 10
GG RPG
Sbjct: 75 GGGGRPG 81
>sp|HBSAG_HBVB2|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 3 GGGAFRPG 10
G GAF PG
Sbjct: 48 GVGAFGPG 55
>sp|HBSAG_HBVB1|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 3 GGGAFRPG 10
G GAF PG
Sbjct: 48 GVGAFGPG 55
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 387 GNGCGLFGKG 396
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 389 GNGCGLFGKG 398
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 387 GNGCGLFGKG 396
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 392 GNGCGLFGKG 401
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 387 GNGCGLFGKG 396
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 387 GNGCGLFGKG 396
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 387 GNGCGLFGKG 396
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 390 GNGCGLFGKG 399
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 387 GNGCGLFGKG 396
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 396 GNGCGLFGKG 405
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 396 GNGCGLFGKG 405
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 382 GNGCGLFGKG 391
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 GGAFRPG 10
GG RPG
Sbjct: 385 GGVQRPG 391
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GNGGGA 6
GN GGA
Sbjct: 280 GNDGGA 285
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 GNGGGA 6
GN GGA
Sbjct: 280 GNDGGA 285
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 GNGGGA 6
GN GGA
Sbjct: 280 GNDGGA 285
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 387 GNGCGLFGKG 396
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 387 GNGCGLFGKG 396
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 395 GNGCGLFGKG 404
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 392 GNGCGLFGKG 401
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 392 GNGCGLFGKG 401
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 387 GNGCGLFGKG 396
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 396 GNGCGLFGKG 405
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 102 GNGCGLFGKG 111
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 GNGGGAFRPG 10
GNG G F G
Sbjct: 388 GNGCGLFGKG 397
>sp|HBSAG_HBVB3|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 3 GGGAFRPG 10
G GAF PG
Sbjct: 59 GVGAFGPG 66
18|Sequence|86|95|AFRPGSRRLL
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 PGSRRLL 10
PG RRLL
Sbjct: 1228 PGLRRLL 1234
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 GSRRLL 10
GSRRLL
Sbjct: 514 GSRRLL 519
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 PGSRRLL 10
PG+RR++
Sbjct: 2857 PGTRRVM 2863
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AFRPGSRRLL 10
AF+PG+ L
Sbjct: 441 AFKPGAEMFL 450
>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain
Query: 4 PGSRR 8
PGSRR
Sbjct: 95 PGSRR 99
>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)
Query: 4 PGSRR 8
PGSRR
Sbjct: 95 PGSRR 99
>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)
Query: 4 PGSRR 8
PGSRR
Sbjct: 95 PGSRR 99
>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)
Query: 4 PGSRR 8
PGSRR
Sbjct: 95 PGSRR 99
>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)
Query: 4 PGSRR 8
PGSRR
Sbjct: 95 PGSRR 99
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 1 AFRPGSRRLL 10
F PG+ RL+
Sbjct: 106 GFEPGTYRLI 115
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 1 AFRPGSRRLL 10
F PG+ RL+
Sbjct: 106 GFEPGTYRLI 115
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 1 AFRPGSRRLL 10
F PG+ RL+
Sbjct: 106 GFEPGTYRLI 115
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 1 AFRPGSRRLL 10
F PG+ RL+
Sbjct: 106 GFEPGTYRLI 115
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 2 FRPGSRR 8
F PGSR+
Sbjct: 403 FSPGSRQ 409
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 1 AFRPGSRRLL 10
F PG+ RL+
Sbjct: 106 GFEPGTYRLI 115
>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)
Query: 1 AFRPGSR 7
A RPG+R
Sbjct: 99 ALRPGNR 105
19|Sequence|91|100|SRRLLGLGGP
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 SRRLLGLGGP 10
S +L+G+GGP
Sbjct: 3528 SFKLMGIGGP 3537
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 SRRLLGLGGP 10
S +L+G+GGP
Sbjct: 3528 SFKLMGIGGP 3537
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 65 SSRLLAVGNP 74
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 38 SSRLLAVGNP 47
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 38 SSRLLAVGNP 47
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 38 SSRLLAVGNP 47
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 SRRLLGLGG 9
S +LLG+GG
Sbjct: 3503 SFKLLGIGG 3511
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 SRRLLGLGG 9
S +LLG+GG
Sbjct: 3503 SFKLLGIGG 3511
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 1 SRRLLGLGGP 10
S RLL LG P
Sbjct: 39 SSRLLTLGHP 48
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 1 SRRLLGLGGP 10
S RLL LG P
Sbjct: 38 SSRLLTLGHP 47
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 46 SSRLLAVGHP 55
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 74 SSRLLAVGHP 83
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 1 SRRLLG 6
SRRLLG
Sbjct: 255 SRRLLG 260
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 1 SRRLLG 6
SRRLLG
Sbjct: 254 SRRLLG 259
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 RLLGLGG 9
+LLG+GG
Sbjct: 3820 KLLGIGG 3826
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 RLLGLGG 9
+LLG+GG
Sbjct: 3820 KLLGIGG 3826
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 RLLGLGG 9
+LLG+GG
Sbjct: 3858 KLLGIGG 3864
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 RLLGLGG 9
+LLG+GG
Sbjct: 3878 KLLGIGG 3884
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 RLLGLGG 9
+LLG+GG
Sbjct: 3908 KLLGIGG 3914
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 RLLGLGG 9
+LLG+GG
Sbjct: 3820 KLLGIGG 3826
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 RLLGLGG 9
+LLG+GG
Sbjct: 3820 KLLGIGG 3826
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 RLLGLGG 9
+LLG+GG
Sbjct: 3858 KLLGIGG 3864
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 RLLGLGG 9
+LLG+GG
Sbjct: 3878 KLLGIGG 3884
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 RLLGLGG 9
+LLG+GG
Sbjct: 3908 KLLGIGG 3914
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 68 SSRLLAVGHP 77
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 66 SSRLLAVGHP 75
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 65 SSRLLTVGNP 74
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 39 SSRLLAVGHP 48
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 39 SSRLLAVGHP 48
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 37 SSRLLAVGHP 46
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 63 STRLLAVGHP 72
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 39 SSRLLAVGHP 48
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 100 SSRLLTVGNP 109
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 38 SSRLLAVGHP 47
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 39 SSRLLAVGHP 48
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 RLLGLGG 9
+LLG+GG
Sbjct: 3843 KLLGVGG 3849
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 RLLGLGG 9
+LLG+GG
Sbjct: 3843 KLLGVGG 3849
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 38 SSRLLAVGHP 47
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 38 SSRLLAVGHP 47
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 1 SRRLLGLGGP 10
S RL+ LG P
Sbjct: 39 SSRLITLGHP 48
>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P
Query: 1 SRRLLGLGGP 10
S+R LG G P
Sbjct: 17 SKRQLGRGEP 26
>sp|IORF_CVHN1|PROTEIN I|Human coronavirus HKU1 (isolate N1)
Query: 1 SRRLLGL 7
SR+LLGL
Sbjct: 15 SRKLLGL 21
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 1 SRRLLGLGGP 10
S RL+ LG P
Sbjct: 39 SSRLITLGHP 48
>sp|IORF_CVHN5|PROTEIN I|Human coronavirus HKU1 (isolate N5)
Query: 1 SRRLLGL 7
SR+LLGL
Sbjct: 15 SRKLLGL 21
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 38 STRLLTIGHP 47
>sp|IORF_CVHN2|PROTEIN I|Human coronavirus HKU1 (isolate N2)
Query: 1 SRRLLGL 7
SR+LLGL
Sbjct: 15 SRKLLGL 21
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 5 LGLGGP 10
LGLGGP
Sbjct: 299 LGLGGP 304
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 5 LGLGGP 10
LGLGGP
Sbjct: 299 LGLGGP 304
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 RLLGLGG 9
+L+G+GG
Sbjct: 3829 KLIGIGG 3835
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 RLLGLGG 9
+L+G+GG
Sbjct: 3829 KLIGIGG 3835
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 1 SRRLLGLGG 9
+RR L LGG
Sbjct: 254 NRRFLPLGG 262
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 1 SRRLLGLGGP 10
S RLL +G P
Sbjct: 38 SARLLTIGHP 47
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 LLGLGGP 10
+LG GGP
Sbjct: 486 VLGAGGP 492
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 1 SRRLLGLGG 9
+RR L LGG
Sbjct: 254 NRRFLPLGG 262
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 LLGLGGP 10
+LG GGP
Sbjct: 486 VLGAGGP 492
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 4 LLGLGGP 10
+LG GGP
Sbjct: 486 VLGAGGP 492
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 4 LLGLGGP 10
+LG GGP
Sbjct: 486 VLGAGGP 492
20|Sequence|96|105|GLGGPPRPFV
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 1 GLGGPPRP 8
GLGGPPRP
Sbjct: 689 GLGGPPRP 696
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 1 GLGGPPRP 8
GLGGPPRP
Sbjct: 686 GLGGPPRP 693
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 1 GLGGPPRP 8
GLGGPPRP
Sbjct: 686 GLGGPPRP 693
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 PPRPFV 10
PP PFV
Sbjct: 1720 PPMPFV 1725
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 PPRPFV 10
PP PFV
Sbjct: 1719 PPMPFV 1724
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GGPPRP 8
GGP RP
Sbjct: 723 GGPDRP 728
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GGPPRP 8
GGP RP
Sbjct: 725 GGPDRP 730
>sp|UL67_HCMVA|UNCHARACTERIZED protein UL67|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GGPPRPF 9
GGP RP
Sbjct: 30 GGPRRPL 36
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 3 GGPPRPFV 10
GGP PFV
Sbjct: 411 GGPVNPFV 418
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 3 GGPPRPFV 10
GGP PFV
Sbjct: 411 GGPVNPFV 418
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 3 GGPPRPFV 10
GGP PFV
Sbjct: 411 GGPVNPFV 418
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 3 GGPPRPFV 10
GGP PFV
Sbjct: 411 GGPVNPFV 418
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 3 GGPPRPFV 10
GGP PFV
Sbjct: 411 GGPVNPFV 418
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 GGPPRP 8
G PPRP
Sbjct: 397 GDPPRP 402
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 GLGGPP 6
GLG PP
Sbjct: 797 GLGDPP 802
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GGPPRP 8
G PPRP
Sbjct: 397 GDPPRP 402
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GLGGPPRPF 9
+G PP PF
Sbjct: 372 AMGPPPIPF 380
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 GLGGPPRP 8
G GG PRP
Sbjct: 580 GAGGIPRP 587
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 LGGPPRPF 9
+ GP +PF
Sbjct: 1807 MQGPSKPF 1814
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 LGGPPRPF 9
+ GP +PF
Sbjct: 1807 MQGPSKPF 1814
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GGPPRP 8
G PPRP
Sbjct: 2770 GDPPRP 2775
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 2 LGGPPRP 8
L GP RP
Sbjct: 120 LDGPSRP 126
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 GGPPRP 8
G PPRP
Sbjct: 2793 GDPPRP 2798
>sp|REV_HV1YF|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 2 LGGPPRP 8
LGGPP P
Sbjct: 64 LGGPPEP 70
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 5 PPRPFV 10
PP P++
Sbjct: 531 PPHPYI 536
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 GGPPRPFV 10
G PP+P V
Sbjct: 1264 GKPPKPSV 1271
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 GLGGPPRPFV 10
G GP +P+V
Sbjct: 1254 GERGPTKPWV 1263
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 GLGGPPRPFV 10
G GP +P+V
Sbjct: 1254 GERGPTKPWV 1263
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 GLGGPPRPFV 10
G GP +P+V
Sbjct: 1254 GERGPTKPWV 1263
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 1 GLGGPPRP 8
G GG P P
Sbjct: 506 GTGGEPNP 513
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 GLGGP 5
G+GGP
Sbjct: 3533 GIGGP 3537
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 GLGGP 5
G+GGP
Sbjct: 3533 GIGGP 3537
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 GLGGPPRPF 9
+G PP PF
Sbjct: 372 AMGPPPIPF 380
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 GLGGP 5
G+GGP
Sbjct: 1009 GIGGP 1013
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 4 GPPRPFV 10
GPPR F
Sbjct: 309 GPPRTFT 315
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 4 GPPRPFV 10
GPPR F
Sbjct: 309 GPPRTFT 315
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GGPPRP 8
G PP+P
Sbjct: 2770 GDPPKP 2775
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 4 GPPRPFV 10
GPPR F
Sbjct: 308 GPPRTFT 314
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 LGGPPR 7
L GPPR
Sbjct: 908 LEGPPR 913
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 GLGGPPRP 8
LGGPP P
Sbjct: 146 ALGGPPPP 153
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 GGPPRP 8
G PPRP
Sbjct: 2793 GDPPRP 2798
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 GGPPRP 8
G PP+P
Sbjct: 2793 GDPPKP 2798
21|Sequence|101|110|PRPFVVLLLP
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 2 RPFVVLLLP 10
RPF V LLP
Sbjct: 172 RPFGVSLLP 180
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 RPFVVLLLP 10
RPF V LLP
Sbjct: 172 RPFGVSLLP 180
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 RPFVVLLL 9
+PFV+L++
Sbjct: 2055 QPFVILVI 2062
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 RPFVVLLL 9
+PFV+L++
Sbjct: 2055 QPFVILVI 2062
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 RPFVVLLLP 10
R FV+ LLP
Sbjct: 129 RAFVIQLLP 137
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 PFVVLLLP 10
PF+V LP
Sbjct: 96 PFLVKFLP 103
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PRPFVV 6
P PFVV
Sbjct: 1721 PMPFVV 1726
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PRPFVV 6
P PFVV
Sbjct: 1720 PMPFVV 1725
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 1 PRPFVVL 7
P P+VVL
Sbjct: 760 PLPYVVL 766
22|Sequence|106|115|VLLLPLASPG
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 VLLLPLASPG 10
+LL P SPG
Sbjct: 631 ILLTPQGSPG 640
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 4 LPLASPG 10
P ASPG
Sbjct: 586 FPFASPG 592
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 4 LPLASPG 10
P ASPG
Sbjct: 586 FPFASPG 592
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 4 LPLASPG 10
P ASPG
Sbjct: 586 FPFASPG 592
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 LLLPLASPG 10
LLLP SP
Sbjct: 513 LLLPWTSPA 521
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 3 LLPLASPG 10
LLP +PG
Sbjct: 593 LLPAVNPG 600
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 3 LLPLASPG 10
LLP +PG
Sbjct: 597 LLPAVNPG 604
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 4 LPLASPG 10
LPL SPG
Sbjct: 468 LPLGSPG 474
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 VLLLPLA 7
VLLLPLA
Sbjct: 1571 VLLLPLA 1577
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 VLLLPLA 7
VLLLPLA
Sbjct: 1571 VLLLPLA 1577
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 VLLLPLA 7
VLLLPLA
Sbjct: 1571 VLLLPLA 1577
23|Sequence|111|120|LASPGAPPAA
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 1 LASPGAPP 8
LA PG+PP
Sbjct: 753 LADPGSPP 760
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 LASPGAPP 8
L +PG PP
Sbjct: 268 LRTPGGPP 275
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 LASPGAPP 8
+ SP APP
Sbjct: 1703 VKSPSAPP 1710
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 2 ASPGAP 7
SPGAP
Sbjct: 340 GSPGAP 345
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 ASPGAP 7
SPGAP
Sbjct: 341 GSPGAP 346
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 2 ASPGAPPAA 10
ASPG PAA
Sbjct: 9 ASPGGKPAA 17
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 2 ASPGAP 7
SPGAP
Sbjct: 340 GSPGAP 345
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 4 PGAPP 8
PG PP
Sbjct: 271 PGGPP 275
>sp|UXP_ADE05|U exon protein|Human adenovirus C serotype 5
Query: 2 ASPGAPPAA 10
ASPGAP A
Sbjct: 121 ASPGAPKKA 129
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 2 ASPGAP 7
SPGAP
Sbjct: 342 GSPGAP 347
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 2 ASPGAP 7
SPGAP
Sbjct: 342 GSPGAP 347
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 3 SPGAPPA 9
SPG PP+
Sbjct: 51 SPGEPPS 57
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 1 LASPGAP 7
ASPG P
Sbjct: 588 FASPGEP 594
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 ASPGAPPA 9
A+P APPA
Sbjct: 471 ATPSAPPA 478
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 ASPGAPPA 9
A+P APPA
Sbjct: 471 ATPSAPPA 478
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 1 LASPGAP 7
ASPG P
Sbjct: 588 FASPGEP 594
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 1 LASPGAP 7
ASPG P
Sbjct: 588 FASPGEP 594
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 LASPGAPPA 9
+ PG PP
Sbjct: 259 IVDPGCPPG 267
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 LASPGAPPA 9
+ PG PP
Sbjct: 259 IVDPGCPPG 267
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 LASPGAPPA 9
+ PG PP
Sbjct: 259 IVDPGCPPG 267
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 4 PGAPPA 9
P APPA
Sbjct: 1679 PAAPPA 1684
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 SPGAPPA 9
+PG PPA
Sbjct: 1279 TPGIPPA 1285
>sp|VP22_HHV11|TEGUMENT protein VP22|Human herpesvirus 1 (strain 17)
Query: 1 LASPGAPP 8
+ASP +PP
Sbjct: 30 MASPDSPP 37
24|Sequence|116|125|APPAAPTRAS
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 2 PPAAPTRAS 10
PPAAPT+ S
Sbjct: 359 PPAAPTKDS 367
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 3 PAAPTRA 9
PAAPTRA
Sbjct: 408 PAAPTRA 414
>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P
Query: 1 APPAAPTRAS 10
APPA PT AS
Sbjct: 467 APPAEPTPAS 476
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PAAPTRAS 10
PAAP RAS
Sbjct: 661 PAAPLRAS 668
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 APPAAPTRAS 10
PP +PT ++
Sbjct: 47 GPPGSPTDSA 56
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 APPAAPTRAS 10
PP +PT ++
Sbjct: 47 GPPGSPTDSA 56
>sp|PHOSP_ABLVB|PHOSPHOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 PPAAPT 7
PP+APT
Sbjct: 157 PPSAPT 162
>sp|YL11_ADE41|UNCHARACTERIZED 16.5 kDa protein in|Human adenovirus F serotype 41
Query: 3 PAAPTRAS 10
PA+P RAS
Sbjct: 3 PASPIRAS 10
>sp|SF33K_ADE02|PROTEIN 33K|Human adenovirus C serotype 2
Query: 1 APPAAPTR 8
APPA P R
Sbjct: 84 APPALPVR 91
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 PPAAPTRAS 10
P AP+RAS
Sbjct: 1800 PSLAPSRAS 1808
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 PAAPTRAS 10
PA PTRA
Sbjct: 796 PATPTRAD 803
>sp|PKG2_ADE02|PACKAGING protein 2|Human adenovirus C serotype 2
Query: 1 APPAAPTR 8
APPA P R
Sbjct: 84 APPALPVR 91
25|Sequence|121|130|PTRASPLGAR
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 1 PTRASPLGA 9
PT ++P+GA
Sbjct: 225 PTTSTPVGA 233
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 PTRASP 6
PTRA+P
Sbjct: 1082 PTRANP 1087
>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53
Query: 1 PTRASPLG 8
PT ++P+G
Sbjct: 222 PTTSTPVG 229
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 PTRASP 6
PTRA P
Sbjct: 156 PTRAKP 161
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 3 RASPLGAR 10
R PLG R
Sbjct: 110 RGQPLGVR 117
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 1 PTRASPLGAR 10
P +PLGAR
Sbjct: 264 PLITTPLGAR 273
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 RASPLGA 9
R+SP+GA
Sbjct: 663 RSSPIGA 669
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 RASPLGA 9
R+SP+GA
Sbjct: 663 RSSPIGA 669
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 RASPLGA 9
R+SP+GA
Sbjct: 661 RSSPIGA 667
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 1 PTRASPL 7
PTR++PL
Sbjct: 25 PTRSAPL 31
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 RASPLGA 9
R+SP+GA
Sbjct: 663 RSSPIGA 669
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 3 RASPLGA 9
R+SP+GA
Sbjct: 663 RSSPIGA 669
>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 PTRASPLGA 9
PT ASPL +
Sbjct: 144 PTTASPLSS 152
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 PTRASP 6
PT ASP
Sbjct: 1603 PTHASP 1608
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 PTRASP 6
PT ASP
Sbjct: 1603 PTHASP 1608
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 PTRASP 6
PT ASP
Sbjct: 1600 PTHASP 1605
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 PTRASP 6
PT ASP
Sbjct: 1600 PTHASP 1605
26|Sequence|126|135|PLGARASPPR
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 PLGARASPPR 10
P+G R P R
Sbjct: 497 PMGTRNVPAR 506
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 1 PLGARASPPR 10
P+G R P R
Sbjct: 489 PMGTRNVPAR 498
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 1 PLGARASPPR 10
P+G R P R
Sbjct: 497 PMGTRNVPAR 506
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PLGARASPP 9
PLG + PP
Sbjct: 45 PLGVKLDPP 53
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PLGARASPP 9
PLG + PP
Sbjct: 45 PLGVKLDPP 53
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PLGARASPP 9
P G + SPP
Sbjct: 741 PQGWKGSPP 749
>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40
Query: 3 GARASPPR 10
G+RA PP+
Sbjct: 77 GSRAVPPK 84
>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7
Query: 3 GARASPPR 10
G+RA PP+
Sbjct: 77 GSRAIPPK 84
27|Sequence|131|140|ASPPRSGVSL
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 4 PRSGVS 9
PRSGVS
Sbjct: 760 PRSGVS 765
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SPPRSGVS 9
SPP+SG S
Sbjct: 482 SPPQSGRS 489
>sp|DUT_MONPV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Monkeypox virus (MPXV)
Query: 4 PRSGVSL 10
PRSG+SL
Sbjct: 72 PRSGLSL 78
>sp|DUT_VARV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus
Query: 4 PRSGVSL 10
PRSG+SL
Sbjct: 68 PRSGLSL 74
>sp|DUT_VAR67|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus (isolate
Query: 4 PRSGVSL 10
PRSG+SL
Sbjct: 68 PRSGLSL 74
>sp|DUT_VACCP|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain L-IVP)
Query: 4 PRSGVSL 10
PRSG+SL
Sbjct: 68 PRSGLSL 74
>sp|DUT_VACCC|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 4 PRSGVSL 10
PRSG+SL
Sbjct: 68 PRSGLSL 74
>sp|DUT_VACCA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 4 PRSGVSL 10
PRSG+SL
Sbjct: 68 PRSGLSL 74
>sp|DUT_CWPXG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Cowpox virus (strain GRI-90 /
Query: 4 PRSGVSL 10
PRSG+SL
Sbjct: 68 PRSGLSL 74
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 2 SPPRSGVS 9
S PRSG+S
Sbjct: 304 SLPRSGIS 311
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 ASPPRSGVS 9
A+PP S VS
Sbjct: 668 ATPPNSPVS 676
>sp|YHR1_HCMVA|UNCHARACTERIZED protein HHRF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ASPPRSGVSL 10
ASPPR+ SL
Sbjct: 109 ASPPRARPSL 118
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 1 ASPPRSGVS 9
A PP+ G+S
Sbjct: 351 AGPPQVGLS 359
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 PRSGVSL 10
PRSGV +
Sbjct: 479 PRSGVDM 485
>sp|VNB_INBLE|GLYCOPROTEIN NB|Influenza B virus (strain B/Lee/1940)
Query: 2 SPPRSGVSL 10
S PR+GV +
Sbjct: 76 STPRAGVDI 84
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 ASPPRSGVS 9
A PP+ G+S
Sbjct: 351 AGPPQVGLS 359
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 PPRSGVS 9
PPRSG +
Sbjct: 415 PPRSGAA 421
>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPRSGVS 9
PPRSG +
Sbjct: 415 PPRSGAA 421
>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPRSGVS 9
PPRSG +
Sbjct: 414 PPRSGAA 420
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 ASPPRSGVS 9
ASPP S S
Sbjct: 669 ASPPNSPAS 677
>sp|VNB_INBVI|GLYCOPROTEIN NB|Influenza B virus (strain B/Victoria/3/1985)
Query: 2 SPPRSGVSL 10
S PR+GV +
Sbjct: 75 SSPRTGVDI 83
>sp|VNB_INBMF|GLYCOPROTEIN NB|Influenza B virus (strain B/Memphis/3/1989)
Query: 2 SPPRSGVSL 10
S PR+GV +
Sbjct: 75 SSPRTGVDI 83
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 SPPRSGV 8
SPP +GV
Sbjct: 465 SPPGAGV 471
>sp|VNB_INBME|GLYCOPROTEIN NB|Influenza B virus (strain B/Memphis/6/1986)
Query: 2 SPPRSGVSL 10
S PR+GV +
Sbjct: 75 SSPRTGVDI 83
>sp|VNB_INBLN|GLYCOPROTEIN NB|Influenza B virus (strain B/Leningrad/179/1986)
Query: 2 SPPRSGVSL 10
S PR+GV +
Sbjct: 75 SSPRTGVDI 83
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 2 SPPRSGV 8
SPP SG+
Sbjct: 758 SPPHSGM 764
>sp|VNB_INBBE|GLYCOPROTEIN NB|Influenza B virus (strain B/Beijing/1/1987)
Query: 2 SPPRSGVSL 10
S PR+GV +
Sbjct: 75 SSPRTGVDI 83
>sp|VNB_INBSI|GLYCOPROTEIN NB|Influenza B virus (strain B/Singapore/222/1979)
Query: 2 SPPRSGVSL 10
S PR+GV +
Sbjct: 76 SSPRTGVDI 84
>sp|VNB_INBUS|GLYCOPROTEIN NB|Influenza B virus (strain B/USSR/100/1983)
Query: 2 SPPRSGVSL 10
S PR+GV +
Sbjct: 76 SSPRTGVDI 84
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASPPRSGVSL 10
A P RSG L
Sbjct: 1095 AQPDRSGSEL 1104
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 SPPRSGV 8
SPP +GV
Sbjct: 467 SPPGAGV 473
28|Sequence|136|145|SGVSLARPAP
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GVSLARPAP 10
GV+L RP+P
Sbjct: 526 GVALGRPSP 534
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GVSLARPAP 10
GV+L RP+P
Sbjct: 526 GVALGRPSP 534
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GVSLARPAP 10
GV+L RP+P
Sbjct: 526 GVALGRPSP 534
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 SGVSLARPAP 10
+ + LARP+P
Sbjct: 1032 TALKLARPSP 1041
>sp|ORF4_HEVPA|PROTEIN ORF4|Hepatitis E virus genotype 1
Query: 1 SGVSLARPAP 10
+G+SL RP P
Sbjct: 88 AGLSLMRPRP 97
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 SGVSLARPAP 10
SG+S +P P
Sbjct: 839 SGMSTLKPLP 848
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 SGVSLARPAP 10
SG+S+ P P
Sbjct: 2370 SGLSITSPVP 2379
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 LARPAP 10
LARP P
Sbjct: 1776 LARPVP 1781
29|Sequence|141|150|ARPAPGCPRP
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 RPAPGCPRP 10
+P GCP+P
Sbjct: 1351 QPCTGCPKP 1359
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 2 RPAPGCPRP 10
RPAPG P
Sbjct: 345 RPAPGAAGP 353
Query: 2 RPAPGCPRP 10
+PA PRP
Sbjct: 338 KPAVNSPRP 346
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 1 ARPAPGCPRP 10
A P P CP P
Sbjct: 22 AAPIPVCPTP 31
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 1 ARPAPGCPRP 10
A P P CP P
Sbjct: 22 AAPIPVCPTP 31
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 ARPAPGCPR 9
AR +PGC R
Sbjct: 3248 ARVSPGCGR 3256
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 6 GCPRP 10
GCP+P
Sbjct: 476 GCPKP 480
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 5 PGCPRP 10
PG PRP
Sbjct: 744 PGAPRP 749
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 1 ARPAPGCPRP 10
A P G PRP
Sbjct: 75 ANPDVGTPRP 84
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 5 PGCPRP 10
PG PRP
Sbjct: 738 PGAPRP 743
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 1 ARPAPGCPRP 10
+RP PG P
Sbjct: 344 SRPVPGAAGP 353
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 RPAPGC 7
RP PGC
Sbjct: 107 RPMPGC 112
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 ARPAPG 6
ARP PG
Sbjct: 6046 ARPPPG 6051
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 RPAPG 6
RPAPG
Sbjct: 3089 RPAPG 3093
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 4 APGCPRP 10
AP C RP
Sbjct: 241 APPCKRP 247
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 RPAPG 6
RPAPG
Sbjct: 3089 RPAPG 3093
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 RPAPG 6
RPAPG
Sbjct: 3089 RPAPG 3093
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 RPAPG 6
RPAPG
Sbjct: 3089 RPAPG 3093
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 RPAPG 6
RPAPG
Sbjct: 3090 RPAPG 3094
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 RPAPG 6
RPAPG
Sbjct: 3090 RPAPG 3094
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 RPAPG 6
RPAPG
Sbjct: 3089 RPAPG 3093
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 RPAPG 6
RPAPG
Sbjct: 3090 RPAPG 3094
>sp|GN_HHV8P|ENVELOPE glycoprotein N|Human herpesvirus 8 type P
Query: 1 ARPAPG 6
ARP+PG
Sbjct: 44 ARPSPG 49
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 2 RPAPGCP 8
RPAPG P
Sbjct: 386 RPAPGSP 392
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 RPAPGC 7
+PAP C
Sbjct: 300 KPAPRC 305
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 3 PAPGCP 8
P P CP
Sbjct: 146 PRPACP 151
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 6 GCPRP 10
GCP+P
Sbjct: 855 GCPKP 859
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 5 PGCPRP 10
PG P+P
Sbjct: 723 PGAPKP 728
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 5 PGCPRP 10
PG P+P
Sbjct: 723 PGAPKP 728
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 5 PGCPRP 10
PG P+P
Sbjct: 723 PGAPKP 728
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 5 PGCPRP 10
PG P+P
Sbjct: 723 PGAPKP 728
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 PAPGCPRP 10
PAPG P P
Sbjct: 425 PAPGHPEP 432
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 2 RPAPGCPRP 10
R PG P P
Sbjct: 389 RQRPGTPMP 397
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ARPAPGCPRP 10
A A GCPR
Sbjct: 398 AYRATGCPRE 407
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ARPAPGCPRP 10
A A GCPR
Sbjct: 398 AYRATGCPRE 407
>sp|Y206_ADE07|UNCHARACTERIZED 20.6 kDa early protein|Human adenovirus B serotype 7
Query: 2 RPAPGCPR 9
RP+ GC R
Sbjct: 16 RPSQGCFR 23
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 5 PGCPRP 10
PG P+P
Sbjct: 723 PGAPKP 728
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RPAPGC 7
RPA GC
Sbjct: 131 RPASGC 136
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RPAPGC 7
RPA GC
Sbjct: 131 RPASGC 136
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 5 PGCP 8
PGCP
Sbjct: 262 PGCP 265
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 5 PGCP 8
PGCP
Sbjct: 262 PGCP 265
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 5 PGCP 8
PGCP
Sbjct: 262 PGCP 265
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 RPAPGCPRP 10
RPAP P P
Sbjct: 580 RPAPWTPNP 588
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RPAPGCPRP 10
RPAP P P
Sbjct: 580 RPAPWTPNP 588
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 3 PAPGCP 8
P+PG P
Sbjct: 1108 PSPGVP 1113
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 5 PGCP 8
PGCP
Sbjct: 592 PGCP 595
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 5 PGCP 8
PGCP
Sbjct: 592 PGCP 595
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 ARPAPGCPRP 10
A PAP PRP
Sbjct: 550 ATPAPLAPRP 559
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 ARPAPGCPRP 10
A PAP PRP
Sbjct: 550 ATPAPLAPRP 559
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 5 PGCP 8
PGCP
Sbjct: 592 PGCP 595
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 RPAPGCPRP 10
RPAP P P
Sbjct: 561 RPAPWTPNP 569
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 3 PAPGCPRP 10
PAPG P P
Sbjct: 425 PAPGHPDP 432
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 5 PGCP 8
PGCP
Sbjct: 590 PGCP 593
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 2 RPAPGCPRP 10
+P PG RP
Sbjct: 477 KPRPGLKRP 485
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 5 PGCP 8
PGCP
Sbjct: 592 PGCP 595
30|Sequence|146|155|GCPRPACEPV
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 1 GCPRPAC 7
G PRPAC
Sbjct: 144 GAPRPAC 150
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 PRPACEPV 10
P+P C+P+
Sbjct: 232 PQPLCQPI 239
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 GCPRPA 6
GCP+PA
Sbjct: 1355 GCPKPA 1360
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 197 ACPKTSFEPI 206
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 PACEPV 10
P CEPV
Sbjct: 1219 PRCEPV 1224
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 3 PRPACEP 9
P+P C P
Sbjct: 232 PQPLCNP 238
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ EP+
Sbjct: 196 ACPKTTFEPI 205
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 205 ACPKVSFEPI 214
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 206 ACPKVSFEPI 215
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 205 ACPKVSFEPI 214
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 200 ACPKVSFEPI 209
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 201 ACPKVSFEPI 210
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 207 ACPKVSFEPI 216
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 205 ACPKVSFEPI 214
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 202 ACPKVSFEPI 211
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 217 ACPKVSFEPI 226
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 204 ACPKVSFEPI 213
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 202 ACPKVSFEPI 211
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 204 ACPKVSFEPI 213
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 211 ACPKVSFEPI 220
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 202 ACPKVSFEPI 211
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 204 ACPKVSFEPI 213
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 204 ACPKVSFEPI 213
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 205 ACPKVSFEPI 214
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 215 ACPKVSFEPI 224
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 209 ACPKVSFEPI 218
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 204 ACPKVSFEPI 213
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 204 ACPKVSFEPI 213
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 200 ACPKVSFEPI 209
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 207 ACPKVSFEPI 216
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 212 ACPKVSFEPI 221
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 197 ACPKVSFEPI 206
>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PRPAC 7
P+PAC
Sbjct: 527 PKPAC 531
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CPRPACEPV 10
CP+ + EP+
Sbjct: 206 CPKVSFEPI 214
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 209 ACPKISFEPI 218
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 199 ACPKISFEPI 208
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 209 ACPKISFEPI 218
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 216 ACPKISFEPI 225
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 CPRP 5
CPRP
Sbjct: 246 CPRP 249
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ EP+
Sbjct: 216 ACPKVTFEPI 225
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ EP+
Sbjct: 204 ACPKVTFEPI 213
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 GCPRPACEP 9
CPRPA P
Sbjct: 1442 ACPRPAEGP 1450
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CPRPACEPV 10
CP+ EP+
Sbjct: 207 CPKVTFEPI 215
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 CPRP 5
CPRP
Sbjct: 820 CPRP 823
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 CPRP 5
CPRP
Sbjct: 852 CPRP 855
Query: 2 CPRPA 6
CP+PA
Sbjct: 1404 CPQPA 1408
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 CPRP 5
CPRP
Sbjct: 847 CPRP 850
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 CPRP 5
CPRP
Sbjct: 847 CPRP 850
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 CPRP 5
CPRP
Sbjct: 849 CPRP 852
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 CPRP 5
CPRP
Sbjct: 849 CPRP 852
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 CPRP 5
CPRP
Sbjct: 815 CPRP 818
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 CPRP 5
CPRP
Sbjct: 813 CPRP 816
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 CPRP 5
CPRP
Sbjct: 820 CPRP 823
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 CPRP 5
CPRP
Sbjct: 848 CPRP 851
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 CPRP 5
CPRP
Sbjct: 848 CPRP 851
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 CPRP 5
CPRP
Sbjct: 846 CPRP 849
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 199 ACPKVSFEPI 208
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 CPRP 5
CPRP
Sbjct: 888 CPRP 891
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 5 PACEPV 10
P C+PV
Sbjct: 56 PICDPV 61
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 CPRP 5
CPRP
Sbjct: 826 CPRP 829
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GCPRPAC 7
G P+P C
Sbjct: 2912 GSPQPYC 2918
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GCPRPAC 7
G P+P C
Sbjct: 2912 GSPQPYC 2918
>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)
Query: 2 CPRPACEPV 10
CP C+P+
Sbjct: 125 CPNAECQPL 133
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + +P+
Sbjct: 201 ACPKVSLDPI 210
>sp|PG190_VACCT|PROTEIN OPG190|Vaccinia virus (strain Tian Tan)
Query: 2 CPRPACEPV 10
CP C+P+
Sbjct: 125 CPNAECQPL 133
>sp|PG190_VACCC|PROTEIN OPG190|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CPRPACEPV 10
CP C+P+
Sbjct: 125 CPNAECQPL 133
>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)
Query: 2 CPRPACEPV 10
CP C+P+
Sbjct: 125 CPNAECQPL 133
>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)
Query: 2 CPRPACEPV 10
CP C+P+
Sbjct: 125 CPNAECQPL 133
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 CPRP 5
CPRP
Sbjct: 873 CPRP 876
>sp|PG190_VACCL|PROTEIN OPG190|Vaccinia virus (strain Lister) (VACV)
Query: 2 CPRPACEPV 10
CP C+P+
Sbjct: 125 CPNAECQPL 133
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 CPRP 5
CPRP
Sbjct: 873 CPRP 876
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 2 CPRP 5
CPRP
Sbjct: 873 CPRP 876
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 CPRP 5
CPRP
Sbjct: 871 CPRP 874
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + EP+
Sbjct: 201 ACPKVSFEPI 210
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 CPRP 5
CPRP
Sbjct: 873 CPRP 876
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 GCPRPAC 7
GC P C
Sbjct: 2152 GCENPDC 2158
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 GCPRPAC 7
GC P C
Sbjct: 2152 GCENPDC 2158
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + +P+
Sbjct: 200 ACPKVSFQPI 209
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + +P+
Sbjct: 198 ACPKVSFQPI 207
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + +P+
Sbjct: 206 ACPKVSFQPI 215
>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PRPACE 8
PRP CE
Sbjct: 547 PRPVCE 552
>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PRPACE 8
PRP CE
Sbjct: 547 PRPVCE 552
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + +P+
Sbjct: 195 ACPKVSWDPI 204
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + +P+
Sbjct: 206 ACPKVSWDPI 215
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + +P+
Sbjct: 204 ACPKVSFDPI 213
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + +P+
Sbjct: 205 ACPKVSFDPI 214
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GCPRPACEPV 10
CP+ + +P+
Sbjct: 202 ACPKVSFDPI 211
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 PRPACEP 9
P P C P
Sbjct: 1681 PSPRCSP 1687
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 PRPACEP 9
P P C P
Sbjct: 1682 PSPRCSP 1688
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 GCPRPACEP 9
CPRP P
Sbjct: 1442 ACPRPVGGP 1450
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 GCPRPACEP 9
CPRP P
Sbjct: 1442 ACPRPVGGP 1450
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 5 PACEP 9
P CEP
Sbjct: 153 PVCEP 157
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 2 CPRP 5
CPRP
Sbjct: 873 CPRP 876
>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)
Query: 2 CPRPACEPV 10
PR A EPV
Sbjct: 452 APRSAGEPV 460
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 CPRPACEP 9
C PAC P
Sbjct: 284 CSEPACAP 291
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 CPRPACEP 9
C PAC P
Sbjct: 284 CSEPACAP 291
>sp|CORE5_ADE02|CORE-CAPSID bridging protein|Human adenovirus C serotype 2
Query: 1 GCPRPACEPV 10
G P P+ +PV
Sbjct: 135 GNPTPSLKPV 144
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 1 GCPRPACEP 9
G RP+C P
Sbjct: 109 GARRPSCSP 117
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 1 GCPRPACEP 9
G RP+C P
Sbjct: 109 GARRPSCSP 117
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 4 RPACEP 9
RPAC P
Sbjct: 1703 RPACVP 1708
>sp|CORE5_ADE05|CORE-CAPSID bridging protein|Human adenovirus C serotype 5
Query: 1 GCPRPACEPV 10
G P P+ +PV
Sbjct: 134 GNPTPSLKPV 143
31|Sequence|151|160|ACEPVYGPLT
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 EPVYGP 8
EP++GP
Sbjct: 1549 EPIHGP 1554
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 EPVYGP 8
EP++GP
Sbjct: 1549 EPIHGP 1554
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 EPVYGP 8
EP++GP
Sbjct: 1549 EPIHGP 1554
>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34
Query: 2 CEPVYGPL 9
C+P GPL
Sbjct: 237 CDPDEGPL 244
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 1 ACEPVY 6
AC+PVY
Sbjct: 158 ACDPVY 163
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 CEPVYGPL 9
C+ VY PL
Sbjct: 6220 CDYVYNPL 6227
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 CEPVYGPL 9
C+ VY PL
Sbjct: 6170 CDYVYNPL 6177
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 CEPVYGPL 9
C+ VY PL
Sbjct: 6190 CDYVYNPL 6197
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 EPVYGP 8
+PV+GP
Sbjct: 1587 DPVWGP 1592
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 VYGPLT 10
+YGPLT
Sbjct: 130 IYGPLT 135
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 CEPVYGPLT 10
CE GPLT
Sbjct: 92 CEQFVGPLT 100
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 4 PVYGPL 9
P+YGPL
Sbjct: 16 PLYGPL 21
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 3 EPVYGPL 9
EP Y PL
Sbjct: 106 EPHYSPL 112
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 3 EPVYGPL 9
EP Y PL
Sbjct: 106 EPHYSPL 112
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 3 EPVYGP 8
+P YGP
Sbjct: 12 DPKYGP 17
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 3 EPVYGPL 9
EP Y PL
Sbjct: 106 EPHYSPL 112
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 3 EPVYGPL 9
EP Y PL
Sbjct: 106 EPHYSPL 112
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 3 EPVYGPL 9
EP Y PL
Sbjct: 106 EPHYSPL 112
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 2 CEPVYGP 8
CE +GP
Sbjct: 650 CEVAFGP 656
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 5 VYGPLT 10
+YGPLT
Sbjct: 130 LYGPLT 135
>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 EPVYGP 8
EP+Y P
Sbjct: 52 EPIYQP 57
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 349 ACQGVGGP 356
>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)
Query: 3 EPVYGP 8
EP+Y P
Sbjct: 52 EPIYQP 57
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 3 EPVYG 7
EPVYG
Sbjct: 166 EPVYG 170
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 4 PVYGPL 9
P YGPL
Sbjct: 145 PKYGPL 150
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CEPVYG 7
CE +YG
Sbjct: 175 CEAIYG 180
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 4 PVYGPL 9
P YGPL
Sbjct: 145 PKYGPL 150
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 349 ACQGVGGP 356
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 349 ACQGVGGP 356
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CEPVYG 7
CE +YG
Sbjct: 175 CEAIYG 180
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 355 ACQGVGGP 362
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 345 ACQGVGGP 352
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 3 EPVYGPLT 10
EPV GP T
Sbjct: 34 EPVAGPTT 41
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ACEPVYG 7
ACE VY
Sbjct: 397 ACEDVYN 403
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 EPVYG 7
EPVYG
Sbjct: 166 EPVYG 170
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 349 ACQGVGGP 356
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 350 ACQGVGGP 357
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 351 ACQGVGGP 358
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 349 ACQGVGGP 356
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 347 ACQGVGGP 354
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 345 ACQGVGGP 352
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 351 ACQGVGGP 358
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 345 ACQGVGGP 352
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ACEPVY 6
ACE VY
Sbjct: 397 ACEDVY 402
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 348 ACQGVGGP 355
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 351 ACQGVGGP 358
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 348 ACQGVGGP 355
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 4 PVYGPLT 10
PVY P T
Sbjct: 255 PVYAPST 261
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CEPVYGPL 9
C+ +Y PL
Sbjct: 6132 CDYLYNPL 6139
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ACEPVYGPLT 10
ACE + P+T
Sbjct: 1171 ACELILTPVT 1180
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ACEPVYGPLT 10
ACE + P+T
Sbjct: 1171 ACELILTPVT 1180
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 351 ACQGVGGP 358
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 355 ACQGVGGP 362
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACEPVYGP 8
AC+ V GP
Sbjct: 348 ACQGVGGP 355
32|Sequence|156|165|YGPLTMSLKP
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 YGPLTMSLKP 10
YG LT+ +P
Sbjct: 457 YGELTLDCEP 466
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 YGPLTMSLKP 10
YG LT+ +P
Sbjct: 457 YGELTLDCEP 466
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 YGPLTMSLKP 10
YG LT+ +P
Sbjct: 457 YGELTLDCEP 466
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 YGPLTMSLKP 10
YG LT+ +P
Sbjct: 457 YGELTLDCEP 466
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 YGPLTMSLKP 10
YG +TM P
Sbjct: 458 YGTITMECSP 467
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 YGPLTMSLKP 10
YG +TM P
Sbjct: 227 YGTVTMECSP 236
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 YGPLTMSLKP 10
YG LT+ P
Sbjct: 458 YGALTLDCSP 467
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 YGPLTMSLKP 10
YG +TM P
Sbjct: 178 YGTVTMQCSP 187
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 YGPLTMSLKP 10
YG +TM P
Sbjct: 458 YGTVTMECSP 467
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 YGPLTMSLKP 10
YG LT+ P
Sbjct: 458 YGALTLDCSP 467
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 YGPLTMSLKP 10
YG LT+ P
Sbjct: 458 YGALTLDCSP 467
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 YGPLTMSLKP 10
YG +TM P
Sbjct: 458 YGTVTMECSP 467
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 YGPLTMSLKP 10
YG +TM P
Sbjct: 458 YGTVTMECSP 467
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 YGPLTMSLKP 10
YG +TM P
Sbjct: 458 YGTVTMECSP 467
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 YGPLTMSLKP 10
YG +TM P
Sbjct: 358 YGTVTMECSP 367
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 YGPLTMSLKP 10
YG +TM P
Sbjct: 458 YGTVTMECSP 467
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 YGPLTMSLKP 10
YG LT+ P
Sbjct: 458 YGALTLDCSP 467
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 YGPLTMSLKP 10
YG +TM P
Sbjct: 178 YGTVTMDCSP 187
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 YGPLTMSLKP 10
YG LT+ P
Sbjct: 458 YGALTLDCSP 467
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 YGPLTMSLKP 10
YG +TM P
Sbjct: 458 YGTVTMECSP 467
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 YGPLTMSLKP 10
YG +TM P
Sbjct: 458 YGTVTMECSP 467
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 YGPLTMSLKP 10
YG +TM P
Sbjct: 178 YGTVTMECSP 187
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 YGPLTMSLK 9
Y PLT+ ++
Sbjct: 830 YSPLTLQMQ 838
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 1 YGPLTMSLKP 10
YG L++ L P
Sbjct: 410 YGVLSVDLSP 419
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 YGPLTMSLK 9
Y PLT+ ++
Sbjct: 839 YSPLTLQMQ 847
33|Sequence|161|170|MSLKPQQQQQ
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 1 MSLKPQQQQQ 10
MSL PQQ+ +
Sbjct: 95 MSLSPQQKSK 104
>sp|US06_HCMVT|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 1 MSLKPQQQ 8
+SL P+QQ
Sbjct: 30 LSLSPRQQ 37
>sp|US06_HCMVA|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 MSLKPQQQ 8
+SL P+QQ
Sbjct: 30 LSLSPRQQ 37
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 3 LKPQQQQQ 10
++PQ Q+Q
Sbjct: 124 IRPQNQEQ 131
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 1 MSLKPQQQQ 9
MSL PQ Q+
Sbjct: 531 MSLPPQDQK 539
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 3 LKPQQQQQ 10
++PQ Q+Q
Sbjct: 124 VRPQNQEQ 131
>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)
Query: 3 LKPQQQQQ 10
LKP +QQ
Sbjct: 26 LKPSDRQQ 33
34|Sequence|166|175|QQQQQQQQQQ
***** No hits found ******
35|Sequence|171|180|QQQQQQQQQQ
***** No hits found ******
36|Sequence|176|185|QQQQQQQQQQ
***** No hits found ******
37|Sequence|181|190|QQQQQQQQPP
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 5 QQQQPP 10
+QQQPP
Sbjct: 380 EQQQPP 385
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 QQQQPP 10
+QQQPP
Sbjct: 380 EQQQPP 385
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 QQQQPP 10
+QQQPP
Sbjct: 380 EQQQPP 385
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 QQQQQQQPP 10
QQ+Q PP
Sbjct: 423 QQKQMDYPP 431
38|Sequence|186|195|QQQPPPAAAN
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 1 QQQPPPAAA 9
Q+PPP A
Sbjct: 354 HQKPPPLPA 362
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 QQQPP 5
QQQPP
Sbjct: 381 QQQPP 385
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QQQPP 5
QQQPP
Sbjct: 381 QQQPP 385
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QQQPP 5
QQQPP
Sbjct: 381 QQQPP 385
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 QQQPPPAAA 9
QQQP P+AA
Sbjct: 559 QQQPTPSAA 567
>sp|HBSAG_HBVA4|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 4 PPPAAAN 10
PPPA+AN
Sbjct: 92 PPPASAN 98
>sp|HBSAG_HBVA8|LARGE envelope protein|Hepatitis B virus genotype A3
Query: 4 PPPAAAN 10
PPPA+AN
Sbjct: 92 PPPASAN 98
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 3 QPPPA 7
QPPPA
Sbjct: 224 QPPPA 228
>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 PPPAAAN 10
PPPAA N
Sbjct: 81 PPPAATN 87
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 QQPPPAA 8
Q PPP A
Sbjct: 1429 QSPPPPA 1435
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 3 QPPPAAA 9
QPPPA A
Sbjct: 134 QPPPAVA 140
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 3 QPPPAAA 9
QPPPA A
Sbjct: 134 QPPPAVA 140
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 QQPPPAAA 9
Q+P PA+A
Sbjct: 17 QKPSPASA 24
>sp|BARF1_EBVG|SECRETED protein BARF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 QPPPAAAN 10
+P P AAN
Sbjct: 165 EPAPTAAN 172
>sp|BARF1_EBVB9|SECRETED protein BARF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 QPPPAAAN 10
+P P AAN
Sbjct: 165 EPAPTAAN 172
>sp|BARF1_EBVA8|SECRETED protein BARF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 QPPPAAAN 10
+P P AAN
Sbjct: 165 EPAPTAAN 172
>sp|HBSAG_HBVC7|LARGE envelope protein|Hepatitis B virus genotype C
Query: 4 PPPAAAN 10
PPPA++N
Sbjct: 92 PPPASSN 98
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QQQPPPAA 8
Q+QPPP A
Sbjct: 768 QEQPPPQA 775
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 QQPPPAAA 9
Q+P PA+A
Sbjct: 17 QKPSPASA 24
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 2 QQPPP 6
QQPPP
Sbjct: 148 QQPPP 152
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 QQPPPAAAN 10
Q PPPA+ +
Sbjct: 249 QSPPPASTD 257
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 QQPPPAAAN 10
Q PPPA+ +
Sbjct: 249 QSPPPASTD 257
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 QQPPPAAAN 10
Q PPPA+ +
Sbjct: 249 QSPPPASTD 257
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 QQQPPPAAAN 10
Q PPP +AN
Sbjct: 3099 QFGPPPVSAN 3108
>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E
Query: 3 QPPPAAAN 10
PPPA+ N
Sbjct: 90 DPPPASTN 97
>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 PPPAAAN 10
PPPA+ N
Sbjct: 81 PPPASTN 87
>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 3 QPPPAAAN 10
PPPA+ N
Sbjct: 91 DPPPASTN 98
>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E
Query: 3 QPPPAAAN 10
PPPA+ N
Sbjct: 90 DPPPASTN 97
>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 3 QPPPAAAN 10
PPPA+ N
Sbjct: 91 DPPPASTN 98
>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E
Query: 3 QPPPAAAN 10
PPPA+ N
Sbjct: 90 DPPPASTN 97
>sp|HBSAG_HBVF4|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 3 QPPPAAAN 10
PPPA+ N
Sbjct: 91 DPPPASTN 98
>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 PPPAAAN 10
PPPA+ N
Sbjct: 81 PPPASTN 87
>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 PPPAAAN 10
PPPA+ N
Sbjct: 81 PPPASTN 87
>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 PPPAAAN 10
PPPA+ N
Sbjct: 81 PPPASTN 87
>sp|HBSAG_HBVF3|LARGE envelope protein|Hepatitis B virus genotype F1
Query: 3 QPPPAAAN 10
PPPA+ N
Sbjct: 91 DPPPASTN 98
>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 PPPAAAN 10
PPPA+ N
Sbjct: 81 PPPASTN 87
>sp|HBSAG_HBVD1|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 PPPAAAN 10
PPPA+ N
Sbjct: 81 PPPASTN 87
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 QQPPPAAAN 10
+ PPP A +
Sbjct: 605 RDPPPGAGS 613
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 QQPPPAAAN 10
+ PPP A +
Sbjct: 605 RDPPPGAGS 613
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 QQPPPAAAN 10
+ PPP A +
Sbjct: 605 RDPPPGAGS 613
>sp|HBSAG_HBVB6|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 4 PPPAAAN 10
PPPA+ N
Sbjct: 92 PPPASTN 98
>sp|HBSAG_HBVH3|LARGE envelope protein|Hepatitis B virus genotype H
Query: 3 QPPPAAAN 10
PPPA+ N
Sbjct: 91 DPPPASTN 98
>sp|HBSAG_HBVH2|LARGE envelope protein|Hepatitis B virus genotype H
Query: 3 QPPPAAAN 10
PPPA+ N
Sbjct: 91 DPPPASTN 98
>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C
Query: 4 PPPAAAN 10
PPPA+ N
Sbjct: 92 PPPASTN 98
>sp|HBSAG_HBVB8|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 4 PPPAAAN 10
PPPA+ N
Sbjct: 92 PPPASTN 98
>sp|HBSAG_HBVB5|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 4 PPPAAAN 10
PPPA+ N
Sbjct: 92 PPPASTN 98
39|Sequence|191|200|PAAANVRKPG
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 5 NVRKPG 10
NVR+PG
Sbjct: 364 NVREPG 369
>sp|SCP_HHV8P|SMALL capsomere-interacting protein|Human herpesvirus 8 type P
Query: 1 PAAANVRKP 9
PA A+ RKP
Sbjct: 156 PAVADARKP 164
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 4 ANVRKPG 10
AN+++PG
Sbjct: 363 ANIKEPG 369
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 ANVRKPG 10
AN+R PG
Sbjct: 48 ANLRNPG 54
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 ANVRKPG 10
AN+R PG
Sbjct: 48 ANLRNPG 54
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 ANVRKPG 10
AN+R PG
Sbjct: 48 ANLRNPG 54
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 AAANVRKPG 10
++ NV++PG
Sbjct: 361 SSPNVKEPG 369
>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)
Query: 2 AAANVRKP 9
AANVR P
Sbjct: 194 CAANVRDP 201
>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)
Query: 2 AAANVRKP 9
AANVR P
Sbjct: 203 CAANVRDP 210
40|Sequence|196|205|VRKPGGSGLL
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 KPGGSGL 9
+PGG+GL
Sbjct: 249 RPGGAGL 255
Query: 1 VRKPGGSG 8
+R P GSG
Sbjct: 235 LRHPAGSG 242
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 KPGGSGL 9
+PGG+GL
Sbjct: 249 RPGGAGL 255
Query: 1 VRKPGGSG 8
+R P GSG
Sbjct: 235 LRHPAGSG 242
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 RKPGGSG 8
+KPGG G
Sbjct: 3 KKPGGPG 9
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 RKPGGSG 8
+KPGG G
Sbjct: 3 KKPGGPG 9
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 RKPGGSG 8
+KPGG G
Sbjct: 3 KKPGGPG 9
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 RKPGGSG 8
+KPGG G
Sbjct: 3 KKPGGPG 9
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 RKPGGSG 8
+KPGG G
Sbjct: 3 KKPGGPG 9
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 RKPGGSG 8
+KPGG G
Sbjct: 3 KKPGGPG 9
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 RKPGGSG 8
+KPGG G
Sbjct: 3 KKPGGPG 9
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka
Query: 1 VRKPGGSG 8
VR P GSG
Sbjct: 65 VRAPMGSG 72
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 VRKPGGSG 8
VR P GSG
Sbjct: 65 VRAPMGSG 72
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 RKPGGSG 8
+KPGG G
Sbjct: 3 KKPGGPG 9
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 RKPGGSG 8
+KPGG G
Sbjct: 3 KKPGGPG 9
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 RKPGGSG 8
+KPGG G
Sbjct: 3 KKPGGPG 9
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 RKPGGSG 8
+KPGG G
Sbjct: 3 KKPGGPG 9
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 RKPGGSG 8
+KPGG G
Sbjct: 3 KKPGGPG 9
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 RKPGGSG 8
+KPGG G
Sbjct: 3 KKPGGPG 9
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PGGSGLL 10
PG SGLL
Sbjct: 210 PGTSGLL 216
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PGGSGLL 10
PG SGLL
Sbjct: 210 PGTSGLL 216
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 4 PGGSG 8
PGGSG
Sbjct: 52 PGGSG 56
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 VRKPGGSG 8
VR P GSG
Sbjct: 97 VRAPMGSG 104
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 VRKPGGSG 8
VR P GSG
Sbjct: 79 VRAPMGSG 86
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 VRKPGGSG 8
+R P GSG
Sbjct: 50 IRAPMGSG 57
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 3 KPGGSGLL 10
KPG GLL
Sbjct: 371 KPGLQGLL 378
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 KPGGSGLL 10
KPG GLL
Sbjct: 371 KPGLQGLL 378
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 KPGGSGL 9
+P GSGL
Sbjct: 164 RPPGSGL 170
>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 KPGGSGL 9
+P GSGL
Sbjct: 164 RPPGSGL 170
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 2 RKPGGSG 8
R PGG G
Sbjct: 475 RGPGGQG 481
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 2 RKPGGSG 8
R PGG G
Sbjct: 475 RGPGGQG 481
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 KPGGSGL 9
+PG SG+
Sbjct: 301 RPGSSGI 307
>sp|NEC2_HHV7J|NUCLEAR egress protein 2|Human herpesvirus 7 (strain JI)
Query: 3 KPGGSGLL 10
KP SG+L
Sbjct: 121 KPSSSGVL 128
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 5 GGSGLL 10
GGSG+L
Sbjct: 849 GGSGVL 854
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 4 PGGSGLL 10
PGG G+L
Sbjct: 1861 PGGLGIL 1867
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 4 PGGSGLL 10
PGG G+L
Sbjct: 1858 PGGLGIL 1864
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 5 GGSGLL 10
GGSGL+
Sbjct: 989 GGSGLV 994
41|Sequence|201|210|GSGLLASPAA
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 GSGLLASP 8
G GLLA P
Sbjct: 177 GPGLLAMP 184
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 GSGLLASP 8
G GLLA P
Sbjct: 177 GPGLLAMP 184
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 GSGLLASP 8
G GLLA P
Sbjct: 177 GPGLLAMP 184
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 GSGLLASP 8
G GLLA P
Sbjct: 177 GPGLLAMP 184
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 GSGLLASP 8
G GLLA P
Sbjct: 177 GPGLLAMP 184
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 GSGLLASP 8
G GLLA P
Sbjct: 177 GPGLLAMP 184
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 SGLLASPAA 10
+GLLA P+A
Sbjct: 202 TGLLARPSA 210
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 GSGLLASPAA 10
G+G+ ASP +
Sbjct: 340 GTGMPASPGS 349
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 GSGLLASPA 9
G GL+ +PA
Sbjct: 2071 GYGLIMTPA 2079
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GSGLLASPAA 10
G G LA+P A
Sbjct: 489 GDGGLAAPRA 498
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 GSGLLASPA 9
G GL+ +PA
Sbjct: 2083 GYGLIMTPA 2091
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 GSGLLASPA 9
G GL+ +PA
Sbjct: 2082 GYGLIMTPA 2090
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 GSGLLASPA 9
G GL+ +PA
Sbjct: 2081 GYGLIMTPA 2089
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 GSGLLASPA 9
G GL+ +PA
Sbjct: 2072 GYGLIMTPA 2080
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 GSGLLASPA 9
G GL+ +PA
Sbjct: 2073 GYGLIMTPA 2081
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 GSGLLASPA 9
GS LASPA
Sbjct: 381 GSYYLASPA 389
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 GSGLLASPA 9
GS LASPA
Sbjct: 381 GSYYLASPA 389
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 GSGLLASPA 9
GS LASPA
Sbjct: 381 GSYYLASPA 389
42|Sequence|206|215|ASPAAAPSPS
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 3 PAAAPSPS 10
PA+AP P+
Sbjct: 138 PASAPGPA 145
>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)
Query: 1 ASPAAAP 7
+SPA+AP
Sbjct: 19 SSPASAP 25
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 2 SPAAAPSPS 10
+P AP+PS
Sbjct: 25 APKGAPNPS 33
>sp|VP24_EBOSU|MEMBRANE-ASSOCIATED protein VP24|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 PAAAPSPS 10
P A P PS
Sbjct: 229 PVATPKPS 236
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 SPAAAP 7
SPA+AP
Sbjct: 20 SPASAP 25
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PAAAPS 8
PAAAPS
Sbjct: 141 PAAAPS 146
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 2 SPAAAPSPS 10
SPA PSPS
Sbjct: 644 SPADIPSPS 652
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 SPAAAP 7
SPA+AP
Sbjct: 20 SPASAP 25
43|Sequence|211|220|APSPSSSSVS
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 1 APSPSSSSVS 10
APSPS S VS
Sbjct: 292 APSPSGSMVS 301
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 APSPSSSSVS 10
+P+PS+SSV+
Sbjct: 28 SPAPSTSSVA 37
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 APSPSSSSVS 10
+P+PS+SSV+
Sbjct: 28 SPAPSTSSVA 37
>sp|X_HBVC5|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PSPSSSSV 9
PSPSSS+V
Sbjct: 38 PSPSSSAV 45
>sp|X_HBVC3|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PSPSSSSV 9
PSPSSS+V
Sbjct: 38 PSPSSSAV 45
>sp|X_HBVC7|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PSPSSSSV 9
PSPSSS+V
Sbjct: 38 PSPSSSAV 45
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 APSPSSSSVS 10
APSPS S VS
Sbjct: 292 APSPSGSMVS 301
>sp|X_HBVC8|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PSPSSSSV 9
PSPSSS+V
Sbjct: 38 PSPSSSAV 45
>sp|X_HBVC2|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PSPSSSSV 9
PSPSSS+V
Sbjct: 38 PSPSSSAV 45
>sp|X_HBVC1|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PSPSSSSV 9
PSPSSS+V
Sbjct: 38 PSPSSSAV 45
>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C
Query: 2 PSPSSSSV 9
PSPSSS+V
Sbjct: 38 PSPSSSAV 45
>sp|X_HBVCJ|PROTEIN X|Hepatitis B virus genotype C
Query: 2 PSPSSSSV 9
PSPSSS+V
Sbjct: 38 PSPSSSAV 45
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 2 PSPSSSSVS 10
P+P +SSVS
Sbjct: 206 PTPQASSVS 214
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 1 APSPSSSSVS 10
+PSPS S VS
Sbjct: 290 SPSPSGSMVS 299
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 APSPSSSSVS 10
AP+PS++S++
Sbjct: 2807 APTPSAASLT 2816
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 APSPSSSSVS 10
AP+PS++S++
Sbjct: 2785 APTPSAASLT 2794
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 APSPSSSSVS 10
AP+PS++S++
Sbjct: 2780 APTPSAASLT 2789
44|Sequence|216|225|SSSVSSSSAT
***** No hits found ******
45|Sequence|221|230|SSSATAPSSV
***** No hits found ******
46|Sequence|226|235|APSSVVAATS
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 APSSVVAA 8
APS VVAA
Sbjct: 1720 APSRVVAA 1727
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 PSSVVAATS 10
P SV+ ATS
Sbjct: 3720 PLSVIPATS 3728
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1697 APTRVVAA 1704
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1697 APTRVVAA 1704
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1697 APTRVVAA 1704
>sp|NSP3_ROTWI|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United
Query: 3 SSVVAATS 10
++VVAATS
Sbjct: 21 AAVVAATS 28
>sp|NSP3_ROTHW|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 3 SSVVAATS 10
++VVAATS
Sbjct: 21 AAVVAATS 28
>sp|NSP3_ROTHT|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 3 SSVVAATS 10
++VVAATS
Sbjct: 21 AAVVAATS 28
>sp|NSP3_ROTHS|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])
Query: 3 SSVVAATS 10
++VVAATS
Sbjct: 21 AAVVAATS 28
>sp|NSP3_ROTHP|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 3 SSVVAATS 10
++VVAATS
Sbjct: 18 AAVVAATS 25
>sp|NSP3_ROTHL|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 3 SSVVAATS 10
++VVAATS
Sbjct: 21 AAVVAATS 28
>sp|NSP3_ROTHK|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 3 SSVVAATS 10
++VVAATS
Sbjct: 21 AAVVAATS 28
>sp|NSP3_ROTHD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 3 SSVVAATS 10
++VVAATS
Sbjct: 21 AAVVAATS 28
>sp|NSP3_ROTH7|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United
Query: 3 SSVVAATS 10
++VVAATS
Sbjct: 18 AAVVAATS 25
>sp|NSP3_ROTH6|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 3 SSVVAATS 10
++VVAATS
Sbjct: 21 AAVVAATS 28
>sp|NSP3_ROTH3|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 3 SSVVAATS 10
++VVAATS
Sbjct: 21 AAVVAATS 28
>sp|NSP3_ROTAM|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 3 SSVVAATS 10
++VVAATS
Sbjct: 18 AAVVAATS 25
>sp|NSP3_ROTAD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 3 SSVVAATS 10
++VVAATS
Sbjct: 18 AAVVAATS 25
>sp|NSP3_ROT41|NON-STRUCTURAL protein 3|Rotavirus A (isolate
Query: 3 SSVVAATS 10
++VVAATS
Sbjct: 21 AAVVAATS 28
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1697 APTRVVAA 1704
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1697 APTRVVAA 1704
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 APSSVVAATS 10
+P S++AAT+
Sbjct: 167 SPESLLAATA 176
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1697 APTRVVAA 1704
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1697 APTRVVAA 1704
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1696 APTRVVAA 1703
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1696 APTRVVAA 1703
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1696 APTRVVAA 1703
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1696 APTRVVAA 1703
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1696 APTRVVAA 1703
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1696 APTRVVAA 1703
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 1 APSSVVAATS 10
+P S++AAT+
Sbjct: 167 SPESLLAATA 176
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 PSSVVAATS 10
P SV+ ATS
Sbjct: 3720 PLSVIPATS 3728
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1696 APTRVVAA 1703
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1696 APTRVVAA 1703
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1696 APTRVVAA 1703
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1696 APTRVVAA 1703
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1287 APTRVVAA 1294
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 PSSVVAATS 10
P SV+ ATS
Sbjct: 3745 PLSVIPATS 3753
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 PSSVVAATS 10
P SV+ ATS
Sbjct: 3745 PLSVIPATS 3753
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1721 APTRVVAA 1728
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1721 APTRVVAA 1728
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1725 APTRVVAA 1732
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1725 APTRVVAA 1732
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1728 APTRVVAA 1735
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1728 APTRVVAA 1735
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 APSSVVAA 8
AP+ VVAA
Sbjct: 1726 APTRVVAA 1733
47|Sequence|231|240|VAATSGGGRP
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 VAATSGGGRP 10
+ ++GGGRP
Sbjct: 112 ILQSNGGGRP 121
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 SGGGRP 10
SGGG+P
Sbjct: 372 SGGGKP 377
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 SGGGRP 10
SGGG+P
Sbjct: 372 SGGGKP 377
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 SGGGRP 10
SGGG+P
Sbjct: 372 SGGGKP 377
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 6 GGGRP 10
GGGRP
Sbjct: 76 GGGRP 80
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 6 GGGRP 10
GGGRP
Sbjct: 76 GGGRP 80
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 6 GGGRP 10
GGGRP
Sbjct: 76 GGGRP 80
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 6 GGGRP 10
GGGRP
Sbjct: 76 GGGRP 80
48|Sequence|236|245|GGGRPGLGRG
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 1 GGGRPGL 7
GGGRPG+
Sbjct: 76 GGGRPGV 82
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 1 GGGRPGL 7
GGGRPG+
Sbjct: 76 GGGRPGV 82
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GGGRPG 6
GGG+PG
Sbjct: 373 GGGKPG 378
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GGGRPG 6
GGG+PG
Sbjct: 373 GGGKPG 378
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GGGRPG 6
GGG+PG
Sbjct: 373 GGGKPG 378
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 4 RPGLGR 9
RPGLG+
Sbjct: 459 RPGLGK 464
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 GRPGLGRG 10
G PG G+G
Sbjct: 1254 GSPGTGKG 1261
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 GGGRPG 6
G GRPG
Sbjct: 1001 GAGRPG 1006
Query: 1 GGGRPG 6
G G+PG
Sbjct: 205 GAGKPG 210
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 GGGRPG 6
G GRPG
Sbjct: 1001 GAGRPG 1006
Query: 1 GGGRPG 6
G G+PG
Sbjct: 205 GAGKPG 210
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 GGGRPG 6
G GRPG
Sbjct: 1001 GAGRPG 1006
Query: 1 GGGRPG 6
G G+PG
Sbjct: 205 GAGKPG 210
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 GGGRPG 6
G GRPG
Sbjct: 1002 GAGRPG 1007
Query: 1 GGGRPG 6
G G+PG
Sbjct: 206 GAGKPG 211
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 GGGRPG 6
G GRPG
Sbjct: 1002 GAGRPG 1007
Query: 1 GGGRPG 6
G G+PG
Sbjct: 206 GAGKPG 211
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 GGGRPG 6
G GRPG
Sbjct: 1002 GAGRPG 1007
Query: 1 GGGRPG 6
G G+PG
Sbjct: 206 GAGKPG 211
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 1 GGGRPGL 7
GGGRP +
Sbjct: 76 GGGRPSV 82
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 GRPGLGR 9
G+PG+G+
Sbjct: 1130 GKPGVGK 1136
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 1 GGGRPGL 7
GGGRP +
Sbjct: 76 GGGRPSV 82
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 GGGRPG 6
GGGRP
Sbjct: 117 GGGRPA 122
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 GGRPGLGRG 10
G RPG RG
Sbjct: 35 GNRPGPSRG 43
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 GGRPGLGRG 10
G RPG RG
Sbjct: 35 GNRPGPSRG 43
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 GGRPGLGRG 10
G RPG RG
Sbjct: 35 GNRPGPSRG 43
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 GGRPGLGRG 10
G RPG RG
Sbjct: 35 GNRPGPSRG 43
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 GGRPGLGRG 10
G RPG RG
Sbjct: 35 GNRPGPSRG 43
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 GGRPGLGRG 10
G RPG RG
Sbjct: 35 GNRPGPSRG 43
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 GGRPGLGRG 10
G RPG RG
Sbjct: 35 GNRPGPSRG 43
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 GGRPGLGRG 10
G RPG RG
Sbjct: 35 GNRPGPSRG 43
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 GGRPGLGRG 10
G RPG RG
Sbjct: 35 GNRPGPSRG 43
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GGGRPGLG 8
GGGR G G
Sbjct: 2488 GGGRRGTG 2495
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GGGRPGLG 8
GGGR G G
Sbjct: 2489 GGGRRGTG 2496
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GGGRPGLG 8
GGGR G G
Sbjct: 2489 GGGRRGTG 2496
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 GRPGLGR 9
G+PG+G+
Sbjct: 495 GKPGIGK 501
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 3 GRPGLGRG 10
G PGLG G
Sbjct: 266 GNPGLGAG 273
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 2 GGRPGLGRG 10
G RPG RG
Sbjct: 35 GNRPGPSRG 43
>sp|NS1_I02A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 2 GGRPGL 7
GGRP L
Sbjct: 209 GGRPSL 214
>sp|NS1_I02A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 GGRPGL 7
GGRP L
Sbjct: 209 GGRPSL 214
>sp|NS1_I02A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 GGRPGL 7
GGRP L
Sbjct: 209 GGRPSL 214
>sp|NS1_I02A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Guinea
Query: 2 GGRPGL 7
GGRP L
Sbjct: 209 GGRPSL 214
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 4 RPGLGRG 10
+P LGRG
Sbjct: 409 QPSLGRG 415
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 1 GGGRPGLGRG 10
GG PG RG
Sbjct: 89 GGRGPGSARG 98
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 5 PGLGRG 10
PGLG G
Sbjct: 148 PGLGAG 153
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 GGGRPG 6
G G+PG
Sbjct: 212 GAGKPG 217
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 GGGRPG 6
G G+PG
Sbjct: 215 GAGKPG 220
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 GGGRPG 6
G G+PG
Sbjct: 215 GAGKPG 220
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 GRPGLGR 9
G PG+G+
Sbjct: 1235 GSPGVGK 1241
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 GGGRPG 6
G G+PG
Sbjct: 212 GAGKPG 217
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 GGGRPG 6
G G+PG
Sbjct: 206 GAGKPG 211
>sp|TAT_HV2CA|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 5 PGLGR 9
PGLGR
Sbjct: 129 PGLGR 133
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 GGGRPG 6
G G+PG
Sbjct: 213 GAGKPG 218
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 GGGRPG 6
G G+PG
Sbjct: 198 GSGKPG 203
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 2 GGRPG 6
GG+PG
Sbjct: 114 GGKPG 118
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 GGGRPGL 7
GGG P L
Sbjct: 986 GGGDPNL 992
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 GGGRPGL 7
GGG P L
Sbjct: 986 GGGDPNL 992
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 GGGRPGL 7
GGG P L
Sbjct: 986 GGGDPNL 992
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 GGGRPG 6
G G+PG
Sbjct: 213 GAGKPG 218
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 GGGRPGLG 8
GGG GLG
Sbjct: 3031 GGGVEGLG 3038
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 GGGRPGLG 8
GGG GLG
Sbjct: 3034 GGGVEGLG 3041
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 GGGRPGLG 8
GGG GLG
Sbjct: 3034 GGGVEGLG 3041
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 3 GRPGLG 8
GRPGLG
Sbjct: 46 GRPGLG 51
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 2 GGRPG 6
GG+PG
Sbjct: 114 GGKPG 118
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 GGGRPGLG 8
GGG GLG
Sbjct: 3035 GGGVEGLG 3042
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 GGGRPGLG 8
GGG GLG
Sbjct: 3025 GGGVEGLG 3032
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 GGGRPGLG 8
GGG GLG
Sbjct: 3025 GGGVEGLG 3032
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 GGGRPGLG 8
GGG GLG
Sbjct: 3021 GGGVEGLG 3028
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 GGGRPGLG 8
GGG GLG
Sbjct: 3013 GGGVEGLG 3020
49|Sequence|241|250|GLGRGRNSNK
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LGRGRNSNK 10
LG GRN++K
Sbjct: 1084 LGNGRNASK 1092
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LGRGRNSNK 10
LG GRN++K
Sbjct: 1087 LGNGRNASK 1095
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LGRGRNSNK 10
LG GRN++K
Sbjct: 1088 LGNGRNASK 1096
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 GLGRGRNSNK 10
GLG+ + +NK
Sbjct: 254 GLGKFKRTNK 263
>sp|VP30_EBORR|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 RGRNSN 9
RGR+SN
Sbjct: 7 RGRSSN 12
>sp|VP30_EBORE|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 RGRNSN 9
RGR+SN
Sbjct: 7 RGRSSN 12
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 GRNSNK 10
GRN NK
Sbjct: 1937 GRNQNK 1942
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 GRNSNK 10
GRN NK
Sbjct: 1938 GRNQNK 1943
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 GRNSNK 10
GRN NK
Sbjct: 1938 GRNQNK 1943
>sp|VP40_EBOZM|MATRIX protein VP40|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 LGRGRNSN 9
+ RG NSN
Sbjct: 26 IARGGNSN 33
>sp|VP40_EBOZ5|MATRIX protein VP40|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 LGRGRNSN 9
+ RG NSN
Sbjct: 26 IARGGNSN 33
>sp|VP40_EBOG4|MATRIX protein VP40|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 LGRGRNSN 9
+ RG NSN
Sbjct: 26 IARGGNSN 33
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 4 RGRNSNK 10
RGR NK
Sbjct: 24 RGRKQNK 30
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 RGRNSNK 10
RGR NK
Sbjct: 98 RGRKQNK 104
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 RGRNSNK 10
RGR NK
Sbjct: 98 RGRKQNK 104
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 RGRNSNK 10
RGR NK
Sbjct: 98 RGRKQNK 104
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LGRGR 6
LGRGR
Sbjct: 14 LGRGR 18
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LGRGR 6
LGRGR
Sbjct: 14 LGRGR 18
50|Sequence|246|255|RNSNKGLPQS
>sp|K1_HHV8P|PROTEIN K1|Human herpesvirus 8 type P
Query: 1 RNSNKGLPQ 9
R+SNK +PQ
Sbjct: 248 RDSNKTVPQ 256
>sp|M2_I02A5|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 SNKGLPQS 10
S KG+P+S
Sbjct: 64 STKGVPES 71
>sp|M2_I54A1|MATRIX protein 2|Influenza A virus (strain A/Swine/May/1954
Query: 3 SNKGLPQS 10
S +GLP+S
Sbjct: 64 STEGLPES 71
>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)
Query: 2 NSNKGLPQS 10
N N G+P S
Sbjct: 103 NMNTGVPSS 111
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 RNSNKGLP 8
RN++ GLP
Sbjct: 1939 RNTSPGLP 1946
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 RNSNKGLP 8
RN++ GLP
Sbjct: 1937 RNTSPGLP 1944
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 4 NKGLPQS 10
++GLPQS
Sbjct: 242 DEGLPQS 248
51|Sequence|251|260|GLPQSTISFD
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 3 PQSTISFD 10
PQS ++FD
Sbjct: 271 PQSMVTFD 278
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 GLPQSTISFD 10
G+P+ ++ FD
Sbjct: 1577 GIPKLSLKFD 1586
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 GLPQSTISFD 10
G P+ST FD
Sbjct: 652 GDPESTDRFD 661
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 GLPQSTI 7
GLP STI
Sbjct: 111 GLPDSTI 117
52|Sequence|256|265|TISFDGIYAN
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 ISFDGIYAN 10
I+FDG++ N
Sbjct: 129 INFDGLFQN 137
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 ISFDGIYAN 10
I+FDG++ N
Sbjct: 129 INFDGLFLN 137
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 3 SFDGIY 8
SFDG+Y
Sbjct: 343 SFDGLY 348
>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30
Query: 3 SFDGIY 8
SFDG+Y
Sbjct: 343 SFDGLY 348
>sp|VL2_HPV56|MINOR capsid protein L2|Human papillomavirus 56
Query: 3 SFDGIY 8
SFDG+Y
Sbjct: 343 SFDGLY 348
>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)
Query: 2 ISFDGIYAN 10
I+FDG++ N
Sbjct: 130 INFDGLFLN 138
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 TISFDGIYAN 10
TIS +YAN
Sbjct: 1019 TISSSDVYAN 1028
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 TISFDGIYA 9
T+SFD I A
Sbjct: 629 TLSFDDISA 637
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 TISFDGIYA 9
T+SFD I A
Sbjct: 629 TLSFDDISA 637
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 3 SFDGIYA 9
SFD +Y+
Sbjct: 78 SFDNVYS 84
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 3 SFDGIY 8
+FDG+Y
Sbjct: 343 TFDGLY 348
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 SFDGIYAN 10
+++G++AN
Sbjct: 640 AYEGLFAN 647
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 TISFDGIYAN 10
T+S +YAN
Sbjct: 1019 TVSSSDLYAN 1028
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 TISFDGIYAN 10
T+S +YAN
Sbjct: 1020 TVSSSDLYAN 1029
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 TISFDGIYAN 10
T+S +YAN
Sbjct: 1019 TVSSSDLYAN 1028
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 TISFDGIYAN 10
T+S +YAN
Sbjct: 1019 TVSSSDLYAN 1028
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 TISFDGIYAN 10
T+S +YAN
Sbjct: 1020 TVSSSDLYAN 1029
53|Sequence|261|270|GIYANMRMVH
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 ANMRMVH 10
ANMR++H
Sbjct: 6838 ANMRVIH 6844
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 YANMRMVH 10
Y N R++H
Sbjct: 191 YTNYRLIH 198
>sp|NCAP_BUNYW|NUCLEOPROTEIN virus (BUNV)
Query: 3 YANMRMVH 10
YAN + VH
Sbjct: 23 YANFKRVH 30
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 IYANMR 7
IYAN+R
Sbjct: 46 IYANLR 51
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 IYANMR 7
IYAN+R
Sbjct: 46 IYANLR 51
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 IYANMR 7
IYAN+R
Sbjct: 46 IYANLR 51
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 NMRMVH 10
NMR++H
Sbjct: 6862 NMRVIH 6867
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 NMRMVH 10
NMR++H
Sbjct: 6839 NMRVIH 6844
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 3 YANMRMVH 10
+ NM+++H
Sbjct: 1588 FRNMKLIH 1595
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 GIYANM 6
GIYAN+
Sbjct: 269 GIYANI 274
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GIYANM 6
GIYAN+
Sbjct: 269 GIYANI 274
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 1 GIYANM 6
GIYAN+
Sbjct: 269 GIYANI 274
>sp|ORF3_MERS1|NON-STRUCTURAL protein ORF3|Middle East respiratory syndrome-related coronavirus
Query: 1 GIYANMRM 8
G+Y N R+
Sbjct: 53 GLYTNFRI 60
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 IYANMRMVH 10
+Y N++ VH
Sbjct: 183 LYENIQCVH 191
54|Sequence|266|275|MRMVHILTSV
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 MRMVHILTSV 10
+R+ HILTS+
Sbjct: 1942 VRVTHILTSL 1951
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 VHILTSV 10
VHILT+V
Sbjct: 209 VHILTAV 215
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 MRMVHILT 8
MRM+H+ T
Sbjct: 1307 MRMLHLDT 1314
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 5 HILTSV 10
HILTS+
Sbjct: 78 HILTSI 83
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 5 HILTSV 10
HILTS+
Sbjct: 78 HILTSI 83
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 5 HILTSV 10
HILTS+
Sbjct: 78 HILTSI 83
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 5 HILTSV 10
HILTS+
Sbjct: 78 HILTSI 83
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RMVHILTSV 10
R++H TSV
Sbjct: 192 RLIHCNTSV 200
55|Sequence|271|280|ILTSVVGSKC
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 2 LTSVVGSKC 10
+TS +GSKC
Sbjct: 224 ITSAMGSKC 232
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 2 LTSVVGSKC 10
+TS +GSKC
Sbjct: 224 ITSAMGSKC 232
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 2 LTSVVGSKC 10
+TS +GSKC
Sbjct: 224 ITSAMGSKC 232
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 2 LTSVVGSKC 10
+TS +GSKC
Sbjct: 224 ITSAMGSKC 232
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 LTSVVGSK 9
+TSVVG+K
Sbjct: 1519 ITSVVGTK 1526
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 LTSVVGSK 9
+TSVVG+K
Sbjct: 1489 ITSVVGTK 1496
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 LTSVVGSK 9
+TSVVG+K
Sbjct: 1469 ITSVVGTK 1476
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 LTSVVGSK 9
+TSVVG+K
Sbjct: 1469 ITSVVGTK 1476
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 LTSVVGSK 9
+TSVVG+K
Sbjct: 1489 ITSVVGTK 1496
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 LTSVVGSK 9
+TSVVG+K
Sbjct: 1519 ITSVVGTK 1526
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 2 LTSVVGS 8
LTS+VGS
Sbjct: 145 LTSMVGS 151
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 2 LTSVVGS 8
LTS+VGS
Sbjct: 143 LTSMVGS 149
>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)
Query: 2 LTSVVGSKC 10
L VVG +C
Sbjct: 320 LQEVVGGRC 328
56|Sequence|276|285|VGSKCEVQVK
>sp|VP7_ROTHX|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 VGSKCEVQV 9
+GS C V+V
Sbjct: 187 MGSSCTVKV 195
>sp|VP7_ROTHW|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 VGSKCEVQV 9
+GS C V+V
Sbjct: 187 MGSSCTVKV 195
>sp|VP7_ROTHV|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 VGSKCEVQV 9
+GS C V+V
Sbjct: 187 MGSSCTVKV 195
>sp|VP7_ROTHT|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 VGSKCEVQV 9
+GS C V+V
Sbjct: 187 MGSSCTVKV 195
>sp|VP7_ROTHM|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 VGSKCEVQV 9
+GS C V+V
Sbjct: 187 MGSSCTVKV 195
>sp|VP7_ROTHK|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 VGSKCEVQV 9
+GS C V+V
Sbjct: 187 MGSSCTVKV 195
>sp|VP7_ROTHJ|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 VGSKCEVQV 9
+GS C V+V
Sbjct: 187 MGSSCTVKV 195
>sp|VP7_ROTH4|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 VGSKCEVQV 9
+GS C V+V
Sbjct: 187 MGSSCTVKV 195
>sp|VP7_ROTAD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 VGSKCEVQV 9
+GS C V+V
Sbjct: 187 MGSSCTVKV 195
>sp|VP7_ROTYO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 VGSKCEVQV 9
+GS C ++V
Sbjct: 187 MGSSCTIKV 195
>sp|VP7_ROTHP|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 VGSKCEVQV 9
+GS C ++V
Sbjct: 187 MGSSCTIKV 195
>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 VGSKCEVQV 9
+GS C ++V
Sbjct: 187 MGSSCTIKV 195
>sp|VP7_ROTH3|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 VGSKCEVQV 9
+GS C ++V
Sbjct: 187 MGSSCTIKV 195
>sp|VP7_ROTAM|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 VGSKCEVQV 9
+GS C ++V
Sbjct: 187 MGSSCTIKV 195
>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 VGSKCEVQV 9
+GS C ++V
Sbjct: 187 MGSSCTIKV 195
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 SKCEVQV 9
+KC VQ+
Sbjct: 154 NKCHVQI 160
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VGSKCEV 7
+GS CE+
Sbjct: 141 LGSHCEI 147
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VGSKCEV 7
+GS CE+
Sbjct: 141 LGSHCEI 147
57|Sequence|281|290|EVQVKNGGIY
>sp|SPIKE_ADE03|FIBER protein|Human adenovirus B serotype 3
Query: 2 VQVKNGGI 9
+ VKNGGI
Sbjct: 159 ILVKNGGI 166
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 EVQVKNGGIY 10
EV NGG Y
Sbjct: 4703 EVVYSNGGFY 4712
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 EVQVKNGGIY 10
EV NGG Y
Sbjct: 4728 EVVYSNGGFY 4737
>sp|HEX8_ADE03|HEXON-ASSOCIATED protein|Human adenovirus B serotype 3
Query: 1 EVQVKNGGI 9
EVQ+ N G+
Sbjct: 6 EVQMTNAGV 14
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 4 VKNGGIY 10
VKN G Y
Sbjct: 263 VKNAGAY 269
58|Sequence|286|295|NGGIYEGVFK
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 3 GIYEGVFK 10
GIY+ V+K
Sbjct: 767 GIYQAVYK 774
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 2 GGIYEGV 8
GG+YE V
Sbjct: 684 GGLYEAV 690
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 GGIYEGV 8
GG+YE V
Sbjct: 684 GGLYEAV 690
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 GGIYEGV 8
GG+YE V
Sbjct: 684 GGLYEAV 690
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 2 GGIYEGV 8
GG+YE V
Sbjct: 684 GGLYEAV 690
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 2 GGIYEGV 8
GG+YE V
Sbjct: 684 GGLYEAV 690
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 GGIYEGV 8
GG+YE V
Sbjct: 677 GGLYEAV 683
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 2 GGIYEGV 8
GGIY G+
Sbjct: 9 GGIYSGL 15
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 677 GGLYEAI 683
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 680 GGLYEAI 686
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 661 GGLYEAI 667
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYEAI 690
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 GGIYEGVF 9
G YEG+F
Sbjct: 638 GTAYEGLF 645
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 1 NGGIYEGVF 9
+GG + GVF
Sbjct: 502 DGGAFWGVF 510
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 GGIYEGVF 9
G YEG+F
Sbjct: 637 GTAYEGMF 644
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYESI 690
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYESI 690
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYESI 690
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYESI 690
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 GGIYEGV 8
GG+YE +
Sbjct: 684 GGLYESI 690
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 NGGIYEG 7
NG +Y+G
Sbjct: 1914 NGAMYKG 1920
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 NGGIYEG 7
NG +Y+G
Sbjct: 1914 NGAMYKG 1920
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 GGIYEG 7
GG+Y G
Sbjct: 1211 GGVYAG 1216
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 GGIYEG 7
GG+Y G
Sbjct: 1211 GGVYAG 1216
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 3 GIYEGVF 9
G Y GVF
Sbjct: 272 GFYVGVF 278
59|Sequence|291|300|EGVFKTYSPK
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 EGVFKTYSP 9
EGV++ Y+P
Sbjct: 1511 EGVYRIYAP 1519
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 EGVFKTYS 8
EG FK YS
Sbjct: 278 EGTFKRYS 285
>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22
Query: 1 EGVFKTY 7
EG FKTY
Sbjct: 162 EGTFKTY 168
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 EGVFKTYSP 9
+GV++ +SP
Sbjct: 1511 DGVYRIFSP 1519
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 EGVFKTYSP 9
+GV++ +SP
Sbjct: 1511 DGVYRIFSP 1519
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 EGVFKTYSP 9
+GV++ +SP
Sbjct: 1511 DGVYRIFSP 1519
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 EGVFKTYSP 9
+GV++ +SP
Sbjct: 1511 DGVYRIFSP 1519
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 EGVFKTYSP 9
+GV++ +SP
Sbjct: 1511 DGVYRIFSP 1519
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 GVFKTYSP 9
GV++ Y+P
Sbjct: 1512 GVYRIYTP 1519
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 3 VFKTYSPK 10
VF+T +PK
Sbjct: 560 VFRTSTPK 567
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 5 KTYSP 9
KTYSP
Sbjct: 1234 KTYSP 1238
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 KTYSP 9
KTYSP
Sbjct: 1234 KTYSP 1238
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 2 GVFKTYSPK 10
GVF T SP+
Sbjct: 201 GVFFTDSPE 209
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 2 GVFKTYSPK 10
GVF T SP+
Sbjct: 201 GVFFTDSPE 209
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 2 GVFKTYSPK 10
GVF T SP+
Sbjct: 201 GVFFTDSPE 209
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 GVFKTYSPK 10
GVF T SP+
Sbjct: 201 GVFFTDSPE 209
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GVFKTYSPK 10
GVF T SP+
Sbjct: 201 GVFFTDSPE 209
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EGVFKT 6
EGVFK+
Sbjct: 3117 EGVFKS 3122
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 GVFKTYSPK 10
GVF T SP+
Sbjct: 201 GVFFTDSPE 209
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EGVFKT 6
EGVFK+
Sbjct: 3117 EGVFKS 3122
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EGVFKT 6
EGVFK+
Sbjct: 3117 EGVFKS 3122
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EGVFKT 6
EGVFK+
Sbjct: 3117 EGVFKS 3122
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 GVFKTYSP 9
G+F +SP
Sbjct: 677 GIFPPFSP 684
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 GVFKTYSP 9
G+F +SP
Sbjct: 677 GIFPPFSP 684
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 3 VFKTY 7
VFKTY
Sbjct: 1828 VFKTY 1832
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 3 VFKTY 7
VFKTY
Sbjct: 1827 VFKTY 1831
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 3 VFKTY 7
VFKTY
Sbjct: 1827 VFKTY 1831
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 3 VFKTY 7
VFKTY
Sbjct: 1827 VFKTY 1831
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 3 VFKTY 7
VFKTY
Sbjct: 1827 VFKTY 1831
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 3 VFKTY 7
VFKTY
Sbjct: 1827 VFKTY 1831
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 3 VFKTY 7
VFKTY
Sbjct: 1827 VFKTY 1831
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 3 VFKTY 7
VFKTY
Sbjct: 1827 VFKTY 1831
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 EGVFKT 6
+GVFKT
Sbjct: 420 DGVFKT 425
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 3 VFKTY 7
VFKTY
Sbjct: 1827 VFKTY 1831
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 3 VFKTY 7
VFKTY
Sbjct: 1827 VFKTY 1831
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 EGVFKTYS 8
+G FK YS
Sbjct: 198 DGYFKIYS 205
60|Sequence|296|305|TYSPKCDLVL
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 YSPKCDLVL 10
+SP+CDL+L
Sbjct: 231 HSPRCDLLL 239
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 YSPKCDLVL 10
+SP+CDL+L
Sbjct: 231 HSPRCDLLL 239
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 3 SPKCDLVL 10
+P+CDL+L
Sbjct: 81 NPECDLLL 88
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 3 SPKCDLVL 10
+P+CDL+L
Sbjct: 81 NPECDLLL 88
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 3 SPKCDLVL 10
+P+CDL+L
Sbjct: 81 NPECDLLL 88
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 3 SPKCDLVL 10
+P+CDL+L
Sbjct: 81 NPECDLLL 88
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 3 SPKCDLVL 10
+P+CDL+L
Sbjct: 81 NPECDLLL 88
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 2 YSPKCDL 8
Y P+CDL
Sbjct: 284 YGPECDL 290
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 2 YSPKCDL 8
Y P+CD+
Sbjct: 280 YGPECDV 286
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 TYSPKCDLV 9
T P+CD+V
Sbjct: 96 TLFPRCDIV 104
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 TYSPKCDL 8
TY +CDL
Sbjct: 648 TYGERCDL 655
>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 SPKCD 7
SP+CD
Sbjct: 130 SPRCD 134
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 SPKCD 7
SP+CD
Sbjct: 130 SPRCD 134
>sp|VIF_HV1MA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 SPKCD 7
SP+CD
Sbjct: 130 SPRCD 134
>sp|VIF_HV1ET|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 SPKCD 7
SP+CD
Sbjct: 130 SPRCD 134
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 4 PKCDLVL 10
P+CD+++
Sbjct: 99 PRCDIIV 105
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 4 PKCDLVL 10
P+CD+++
Sbjct: 99 PRCDIIV 105
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 324 NPDCKLVL 331
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 329 NPDCKLVL 336
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 328 NPDCKLVL 335
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 329 NPDCKLVL 336
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 327 NPDCKLVL 334
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 329 NPDCKLVL 336
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 330 NPDCKLVL 337
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 324 NPDCKLVL 331
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 324 NPDCKLVL 331
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 329 NPDCKLVL 336
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 329 NPDCKLVL 336
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 329 NPDCKLVL 336
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 328 NPDCKLVL 335
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 327 NPDCKLVL 334
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 329 NPDCKLVL 336
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 329 NPDCKLVL 336
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 329 NPDCKLVL 336
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 4 PKCDLV 9
P+CD++
Sbjct: 99 PRCDII 104
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 329 NPDCKLVL 336
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 329 NPDCKLVL 336
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 4 PKCDL 8
PKCD+
Sbjct: 384 PKCDM 388
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 330 NPDCKLVL 337
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 329 NPDCKLVL 336
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 324 NPDCKLVL 331
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 4 PKCDL 8
PKCD+
Sbjct: 384 PKCDM 388
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 4 PKCDL 8
PKCD+
Sbjct: 384 PKCDM 388
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 4 PKCDL 8
PKCD+
Sbjct: 384 PKCDM 388
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 324 NPDCKLVL 331
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 SPKCDLVL 10
+P C LVL
Sbjct: 324 NPDCKLVL 331
>sp|NEC2_HHV6Z|NUCLEAR egress protein 2|Human herpesvirus 6B (strain Z29)
Query: 4 PKCDLVL 10
P CD++L
Sbjct: 43 PLCDIIL 49
>sp|NEC2_HHV6U|NUCLEAR egress protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PKCDLVL 10
P CD++L
Sbjct: 43 PLCDIIL 49
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 2 YSPKCDLV 9
Y+PK DL+
Sbjct: 194 YAPKRDLL 201
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 TYSPKCDLV 9
TY+ C LV
Sbjct: 730 TYNSDCPLV 738
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PKCDLVL 10
P C+LVL
Sbjct: 496 PVCNLVL 502
61|Sequence|301|310|CDLVLDAAHE
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CDLVLDA 7
CD++LDA
Sbjct: 246 CDILLDA 252
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 1 CDLVLD 6
CD+VLD
Sbjct: 221 CDIVLD 226
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 1 CDLVLD 6
CD+VLD
Sbjct: 221 CDIVLD 226
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 1 CDLVLD 6
CD+VLD
Sbjct: 223 CDIVLD 228
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 1 CDLVLD 6
CD+VLD
Sbjct: 223 CDIVLD 228
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 1 CDLVLD 6
CD+VLD
Sbjct: 223 CDIVLD 228
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 DLVLDAA 8
DL+LDAA
Sbjct: 308 DLLLDAA 314
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CDLVLDAAH 9
C LVL AH
Sbjct: 262 CHLVLTHAH 270
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CDLVLDAAH 9
C LVL AH
Sbjct: 262 CHLVLTHAH 270
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 CDLVLDAAHE 10
CD L AHE
Sbjct: 332 CDGQLSTAHE 341
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 CDLVLDAAHE 10
CD L AHE
Sbjct: 332 CDGQLSTAHE 341
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 DLVLDAAHE 10
DL+LDA+ E
Sbjct: 408 DLLLDASVE 416
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DLVLDAAHE 10
DL+LDA+ E
Sbjct: 408 DLLLDASVE 416
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 DLVLDAAHE 10
DL+LDA+ E
Sbjct: 408 DLLLDASVE 416
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CDLVLD 6
C+LVLD
Sbjct: 498 CNLVLD 503
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 DLVLDA 7
DLVLDA
Sbjct: 3529 DLVLDA 3534
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 DLVLDA 7
DLVLDA
Sbjct: 3549 DLVLDA 3554
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 DLVLDA 7
DLVLDA
Sbjct: 3529 DLVLDA 3534
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 DLVLDA 7
DLVLDA
Sbjct: 3579 DLVLDA 3584
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 DLVLDA 7
DLVLDA
Sbjct: 3549 DLVLDA 3554
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 DLVLDA 7
DLVLDA
Sbjct: 3579 DLVLDA 3584
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 DLVLDAAHE 10
D V+D HE
Sbjct: 55 DPVMDVIHE 63
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 DLVLDAAHE 10
D V+D HE
Sbjct: 55 DPVMDVIHE 63
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 3 LVLDAAHE 10
L++D HE
Sbjct: 293 LIIDEVHE 300
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 LVLDAAHE 10
L++D HE
Sbjct: 293 LIIDEVHE 300
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 3 LVLDAAHE 10
L++D HE
Sbjct: 293 LIIDEVHE 300
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LVLDAAHE 10
L++D HE
Sbjct: 293 LIIDEVHE 300
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 3 LVLDAAHE 10
L++D HE
Sbjct: 293 LIIDEVHE 300
62|Sequence|306|315|DAAHEKSTES
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 AHEKSTES 10
A+EK TES
Sbjct: 198 ANEKMTES 205
63|Sequence|311|320|KSTESSSGPK
>sp|PRO_ADE03|PROTEASE adenovirus B serotype 3
Query: 1 KSTESSSGPK 10
KST+S GP+
Sbjct: 114 KSTQSVQGPR 123
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 STESSSG 8
STESS+G
Sbjct: 112 STESSTG 118
>sp|PRO_ADE41|PROTEASE adenovirus F serotype 41
Query: 1 KSTESSSGP 9
KST++ GP
Sbjct: 109 KSTQTVQGP 117
>sp|PRO_ADE40|PROTEASE adenovirus F serotype 40
Query: 1 KSTESSSGP 9
KST++ GP
Sbjct: 109 KSTQTVQGP 117
>sp|PRO_ADE12|PROTEASE adenovirus A serotype 12
Query: 1 KSTESSSGP 9
KST++ GP
Sbjct: 109 KSTQTVQGP 117
64|Sequence|316|325|SSGPKREEIM
>sp|NEF_HV1MA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 4 PKREEIM 10
PKR+EI+
Sbjct: 107 PKRQEIL 113
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 GPKREEIM 10
GPK EI+
Sbjct: 2054 GPKEHEIL 2061
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 SGPKREEI 9
SGP R+E+
Sbjct: 1455 SGPIRDEL 1462
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 SGPKREEI 9
SGP R+E+
Sbjct: 1455 SGPIRDEL 1462
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 SGPKREEI 9
SGP R+E+
Sbjct: 1455 SGPIRDEL 1462
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 SGPKREEI 9
SGP R+E+
Sbjct: 1455 SGPIRDEL 1462
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 SGPKREEI 9
SGP R+E+
Sbjct: 1455 SGPIRDEL 1462
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 GPKREEI 9
GP REE+
Sbjct: 1446 GPIREEL 1452
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 GPKREEI 9
GP REE+
Sbjct: 1446 GPIREEL 1452
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 SSGPKREE 8
SSGPK +
Sbjct: 589 SSGPKHTQ 596
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 2 SGPKREE 8
SGP +EE
Sbjct: 250 SGPSKEE 256
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 SSGPKREE 8
SSGPK +
Sbjct: 589 SSGPKHTQ 596
65|Sequence|321|330|REEIMESILF
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 REEIMESILF 10
+E+ M+S+LF
Sbjct: 1453 KEQFMQSVLF 1462
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 2 EEIMESI 8
EE+ME+I
Sbjct: 371 EELMETI 377
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 EEIMESI 8
EE+ME+I
Sbjct: 379 EELMETI 385
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 2 EEIMESI 8
EE+ME+I
Sbjct: 379 EELMETI 385
66|Sequence|326|335|ESILFKCSDF
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 4 LFKCSDF 10
LFKC D
Sbjct: 198 LFKCKDL 204
>sp|US25_HCMVA|UNCHARACTERIZED protein US25|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 KCSDF 10
KCSDF
Sbjct: 34 KCSDF 38
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 4 LFKCSDF 10
LFKC D
Sbjct: 197 LFKCKDL 203
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 1 ESILFKCSDF 10
ESIL + +DF
Sbjct: 423 ESILLELADF 432
>sp|UL92_HHV8P|PROTEIN ORF31|Human herpesvirus 8 type P
Query: 2 SILFKCS 8
S+LFKC+
Sbjct: 163 SMLFKCT 169
>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27
Query: 1 ESILFKCSDF 10
E+I+F+ DF
Sbjct: 260 ETIIFQHPDF 269
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 LFKCSD 9
+FKC+D
Sbjct: 225 IFKCND 230
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 ESILFKCSD 9
ES+L +C D
Sbjct: 356 ESVLKRCRD 364
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 ESILFKCSD 9
ES+L +C D
Sbjct: 356 ESVLKRCRD 364
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 ILFKCSD 9
+LF CSD
Sbjct: 1137 MLFLCSD 1143
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 FKCSDF 10
KCSDF
Sbjct: 1641 LKCSDF 1646
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 FKCSDF 10
KCSDF
Sbjct: 1661 LKCSDF 1666
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 FKCSDF 10
KCSDF
Sbjct: 1691 LKCSDF 1696
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 5 FKCSDF 10
KCSDF
Sbjct: 1661 LKCSDF 1666
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 5 FKCSDF 10
KCSDF
Sbjct: 1641 LKCSDF 1646
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 5 FKCSDF 10
KCSDF
Sbjct: 1691 LKCSDF 1696
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 ESILFKCSDF 10
++ILF+ DF
Sbjct: 2134 QTILFQQEDF 2143
>sp|M2_I35A3|MATRIX protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 ESILFKC 7
+ +LFKC
Sbjct: 44 DRLLFKC 50
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 1 ESILFKCSD 9
ES+ KC D
Sbjct: 427 ESLATKCPD 435
67|Sequence|331|340|KCSDFVVVQF
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 CSDFVVVQF 10
C FV+VQ+
Sbjct: 341 CQRFVIVQY 349
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CSDFVVVQF 10
C FV+VQ+
Sbjct: 341 CQRFVIVQY 349
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 2 CSDFVVVQF 10
CSD+VV F
Sbjct: 243 CSDWVVCVF 251
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CSDFVVVQF 10
CS F+V +F
Sbjct: 70 CSSFIVPEF 78
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 2 CSDFVVVQF 10
CS F+V +F
Sbjct: 70 CSSFIVPEF 78
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 2 CSDFVVVQF 10
CS F+V +F
Sbjct: 70 CSSFIVPEF 78
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 2 CSDFVVVQF 10
CS F+V +F
Sbjct: 70 CSSFIVPEF 78
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 2 CSDFVVVQF 10
CS F+V +F
Sbjct: 70 CSSFIVPEF 78
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 2 CSDFVVVQ 9
CSDF+ ++
Sbjct: 13 CSDFIYLE 20
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 KCSDF 5
KCSDF
Sbjct: 1642 KCSDF 1646
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 KCSDF 5
KCSDF
Sbjct: 1662 KCSDF 1666
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 KCSDF 5
KCSDF
Sbjct: 1692 KCSDF 1696
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 KCSDF 5
KCSDF
Sbjct: 1642 KCSDF 1646
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 KCSDF 5
KCSDF
Sbjct: 1662 KCSDF 1666
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 KCSDF 5
KCSDF
Sbjct: 1692 KCSDF 1696
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 2 CSDFVVVQF 10
CSD+V F
Sbjct: 227 CSDWVTAIF 235
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 CSDFVVVQF 10
C D +QF
Sbjct: 1918 CQDLAALQF 1926
68|Sequence|336|345|VVVQFKDMDS
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 VVVQFKDMD 9
VVVQ KD D
Sbjct: 6717 VVVQLKDSD 6725
>sp|ICP22_VZVO|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 VVQFKDMDS 10
V++F+D D+
Sbjct: 175 VIEFRDSDA 183
>sp|ICP22_VZVD|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 VVQFKDMDS 10
V++F+D D+
Sbjct: 175 VIEFRDSDA 183
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VVVQFKD 7
++VQFK+
Sbjct: 285 IIVQFKN 291
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VVQFKDMDS 10
V FKD+D+
Sbjct: 560 VKMFKDVDA 568
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VVQFKDMDS 10
V FKD+D+
Sbjct: 560 VKMFKDVDA 568
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VVQFKDMDS 10
V FKD+D+
Sbjct: 560 VKMFKDVDA 568
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VQFKDMDS 10
VQF ++DS
Sbjct: 2094 VQFDNLDS 2101
69|Sequence|341|350|KDMDSSYAKR
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 KDMDSSYAK 9
KD+D SYAK
Sbjct: 380 KDIDVSYAK 388
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 KDMDSSYAK 9
KD+D SYAK
Sbjct: 380 KDIDVSYAK 388
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 KDMDSSYAK 9
KD+D SYAK
Sbjct: 380 KDIDVSYAK 388
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 KDMDSSYAK 9
KD+D SYAK
Sbjct: 380 KDIDVSYAK 388
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 KDMDSSYAK 9
KD+D SYAK
Sbjct: 380 KDIDVSYAK 388
>sp|PG157_VARV|PROTEIN OPG157|Variola virus
Query: 1 KDMDSSYA 8
KD+D+ YA
Sbjct: 20 KDIDAQYA 27
>sp|PG157_VAR67|PROTEIN OPG157|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 KDMDSSYA 8
KD+D+ YA
Sbjct: 20 KDIDAQYA 27
>sp|PG157_VACCC|PROTEIN OPG157|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KDMDSSYA 8
KD+D+ YA
Sbjct: 20 KDIDAQYA 27
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 KDMDSSYAK 9
K+M++ YAK
Sbjct: 372 KNMENYYAK 380
70|Sequence|346|355|SYAKRDAFTD
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 YAKRDAFTD 10
Y RDA+TD
Sbjct: 508 YVTRDAYTD 516
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 1 SYAKRDAF 8
SY +R+AF
Sbjct: 355 SYGQREAF 362
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 KRDAFTD 10
K+DAF D
Sbjct: 949 KQDAFCD 955
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 KRDAFTD 10
K+DAF D
Sbjct: 949 KQDAFCD 955
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 KRDAFTD 10
K+DAF D
Sbjct: 949 KQDAFCD 955
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 SYAKRDAFTD 10
SY + FTD
Sbjct: 311 SYVCKQGFTD 320
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 SYAKRDAFTD 10
SY + FTD
Sbjct: 383 SYVCKQGFTD 392
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 SYAKRDAFTD 10
SY + FTD
Sbjct: 383 SYVCKQGFTD 392
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 SYAKRDAFTD 10
SY + FTD
Sbjct: 383 SYVCKQGFTD 392
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 SYAKRDAFTD 10
SY + FTD
Sbjct: 383 SYVCKQGFTD 392
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 SYAKRDAFTD 10
SY + FTD
Sbjct: 383 SYVCKQGFTD 392
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 SYAKRDAFTD 10
SY + FTD
Sbjct: 383 SYVCKQGFTD 392
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 SYAKRDAFTD 10
SY + FTD
Sbjct: 383 SYVCKQGFTD 392
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 SYAKRDAFTD 10
SY + FTD
Sbjct: 383 SYVCKQGFTD 392
71|Sequence|351|360|DAFTDSAISA
>sp|VIF_HV1V9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F+DSAI
Sbjct: 113 DCFSDSAI 120
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F+DSAI
Sbjct: 113 DCFSDSAI 120
>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F+DSAI
Sbjct: 113 DCFSDSAI 120
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F+DSAI
Sbjct: 113 DCFSDSAI 120
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F+DSAI
Sbjct: 113 DCFSDSAI 120
>sp|VIF_HV1MN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F+DSAI
Sbjct: 113 DCFSDSAI 120
>sp|VIF_HV1M2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F+DSAI
Sbjct: 114 DCFSDSAI 121
>sp|VIF_HV1LW|TRUNCATED virion infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F+DSAI
Sbjct: 113 DCFSDSAI 120
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F+DSAI
Sbjct: 113 DCFSDSAI 120
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F+DSAI
Sbjct: 113 DCFSDSAI 120
>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F+DSAI
Sbjct: 113 DCFSDSAI 120
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F+DSAI
Sbjct: 113 DCFSDSAI 120
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F+DSAI
Sbjct: 113 DCFSDSAI 120
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F+DSAI
Sbjct: 113 DCFSDSAI 120
>sp|VIF_HV192|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F DSAI
Sbjct: 113 DCFADSAI 120
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 DAFTDSAIS 9
DAF+DS I+
Sbjct: 31 DAFSDSYIA 39
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F++SAI
Sbjct: 113 DCFSESAI 120
>sp|VIF_HV1VI|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F++SAI
Sbjct: 113 DCFSESAI 120
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F++SAI
Sbjct: 113 DCFSESAI 120
>sp|VIF_HV1SC|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F++SAI
Sbjct: 30 DCFSESAI 37
>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F++SAI
Sbjct: 113 DCFSESAI 120
>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F++SAI
Sbjct: 113 DCFSESAI 120
>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F++SAI
Sbjct: 113 DCFSESAI 120
>sp|VIF_HV1MP|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F++SAI
Sbjct: 114 DCFSESAI 121
>sp|VIF_HV1MA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F++SAI
Sbjct: 113 DCFSESAI 120
>sp|VIF_HV1JR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F++SAI
Sbjct: 113 DCFSESAI 120
>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F++SAI
Sbjct: 113 DCFSESAI 120
>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F++SAI
Sbjct: 113 DCFSESAI 120
>sp|VIF_HV19N|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F++SAI
Sbjct: 113 DCFSESAI 120
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F++SAI
Sbjct: 113 DCFSESAI 120
>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F++SAI
Sbjct: 113 DCFSESAI 120
>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D F++SAI
Sbjct: 113 DCFSESAI 120
>sp|VIF_HV1YF|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DAFTDSAI 8
D FT SAI
Sbjct: 113 DCFTASAI 120
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 DAFTDSAIS 9
D F D AIS
Sbjct: 2027 DKFVDYAIS 2035
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 DAFTDSA 7
++FTDSA
Sbjct: 1390 NSFTDSA 1396
72|Sequence|356|365|SAISAKVNGE
***** No hits found ******
73|Sequence|361|370|KVNGEHKEKD
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 KVNGEHKE 8
K+NG+H++
Sbjct: 1297 KLNGQHEK 1304
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 2 VNGEH 6
VNGEH
Sbjct: 249 VNGEH 253
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 2 VNGEH 6
VNGEH
Sbjct: 249 VNGEH 253
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 VNGEH 6
VNGEH
Sbjct: 963 VNGEH 967
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 VNGEH 6
VNGEH
Sbjct: 964 VNGEH 968
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 VNGEH 6
VNGEH
Sbjct: 964 VNGEH 968
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 VNGEH 6
VNGEH
Sbjct: 963 VNGEH 967
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 3 NGEHKEK 9
+GEHK K
Sbjct: 730 SGEHKNK 736
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 VNGEHKE 8
++GEHK+
Sbjct: 3077 MDGEHKQ 3083
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 KVNGEH 6
+VNG+H
Sbjct: 783 RVNGDH 788
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 KVNGEH 6
+VNG+H
Sbjct: 783 RVNGDH 788
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 KVNGEH 6
+VNG+H
Sbjct: 783 RVNGDH 788
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 KVNGEHKE 8
++ GEHK+
Sbjct: 3080 QMEGEHKQ 3087
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 GEHKEK 9
GEH+E+
Sbjct: 385 GEHEER 390
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 GEHKEK 9
GEH+E+
Sbjct: 454 GEHEER 459
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 NGEHKE 8
NG+H+E
Sbjct: 496 NGQHEE 501
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 KVNGEH 6
K+NG H
Sbjct: 1165 KINGHH 1170
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 KVNGEH 6
K+NG H
Sbjct: 1165 KINGHH 1170
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 KVNGEH 6
K+NG H
Sbjct: 1165 KINGHH 1170
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 KVNGEH 6
K+NG H
Sbjct: 1165 KINGHH 1170
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 VNGEHKEKD 10
++GEH E +
Sbjct: 103 LHGEHSESN 111
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 VNGEHKEKD 10
++GEH E +
Sbjct: 104 LHGEHSESN 112
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 5 EHKEK 9
EHKEK
Sbjct: 1164 EHKEK 1168
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 VNGEHKE 8
+ GEHK+
Sbjct: 3069 MEGEHKQ 3075
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 VNGEHKE 8
+ GEHK+
Sbjct: 3069 MEGEHKQ 3075
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 VNGEHKE 8
+ GEHK+
Sbjct: 3069 MEGEHKQ 3075
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 VNGEHKE 8
+ GEHK+
Sbjct: 3069 MEGEHKQ 3075
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 VNGEHKE 8
+ GEHK+
Sbjct: 3069 MEGEHKQ 3075
74|Sequence|366|375|HKEKDLEPWD
>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)
Query: 1 HKEKDLEPW 9
HK+ D PW
Sbjct: 372 HKDPDAGPW 380
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 4 KDLEPW 9
KDLEP+
Sbjct: 633 KDLEPF 638
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 KEKDLEP 8
+E DLEP
Sbjct: 2262 EESDLEP 2268
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 4 KDLEPW 9
KDLEP+
Sbjct: 633 KDLEPF 638
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 1 HKEKDLEPW 9
H+E+ L P+
Sbjct: 356 HRERRLSPF 364
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 1 HKEKDLEPW 9
H+E+ L P+
Sbjct: 356 HRERRLSPF 364
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 4 KDLEPW 9
KD+E W
Sbjct: 958 KDVEAW 963
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 HKEKDLEPW 9
HK K ++ W
Sbjct: 817 HKAKHIKAW 825
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 3 EKDLEPW 9
++DLE W
Sbjct: 388 KRDLEKW 394
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 5 DLEPWD 10
DL+P+D
Sbjct: 160 DLDPYD 165
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 HKEKDLEP 8
+KE+D EP
Sbjct: 764 NKEEDTEP 771
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 KEKDLEPW 9
KE + EPW
Sbjct: 259 KELENEPW 266
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 5 DLEPWD 10
DL+P+D
Sbjct: 160 DLDPYD 165
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 KEKDLEPW 9
KE + EPW
Sbjct: 258 KELENEPW 265
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 KEKDLE 7
KEKD+E
Sbjct: 1240 KEKDIE 1245
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 5 DLEPWD 10
DL+P+D
Sbjct: 160 DLDPYD 165
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 5 DLEPWD 10
DL+P+D
Sbjct: 160 DLDPYD 165
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 5 DLEPWD 10
DL+P+D
Sbjct: 160 DLDPYD 165
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 HKEKDLEPW 9
HK K ++ W
Sbjct: 804 HKAKHVKAW 812
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 5 DLEPWD 10
DL+P+D
Sbjct: 160 DLDPYD 165
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 KEKDLE 7
KEKD+E
Sbjct: 1248 KEKDIE 1253
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 4 KDLEPWD 10
KDL WD
Sbjct: 447 KDLRFWD 453
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 5 DLEPWD 10
DL+P+D
Sbjct: 160 DLDPYD 165
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HKEKDLEP 8
HK K +EP
Sbjct: 1125 HKGKRIEP 1132
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HKEKDLEP 8
HK K +EP
Sbjct: 1535 HKGKRIEP 1542
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HKEKDLEP 8
HK K +EP
Sbjct: 1535 HKGKRIEP 1542
75|Sequence|371|380|LEPWDAGELT
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 1 LEPWDAGEL 9
+EPW+ EL
Sbjct: 143 MEPWEDWEL 151
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 PWDAGELT 10
PW GE+T
Sbjct: 1056 PWSEGEIT 1063
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 1 LEPWDAGE 8
LEPW+ E
Sbjct: 147 LEPWEDME 154
>sp|NSP4_ROTHO|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 1 LEPWDAGE 8
L+ WD+G+
Sbjct: 156 LDEWDSGK 163
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 1 LEPWDAG 7
++PW+ G
Sbjct: 343 MQPWNVG 349
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 LEPW 4
LEPW
Sbjct: 301 LEPW 304
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 1 LEPW 4
LEPW
Sbjct: 301 LEPW 304
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 1 LEPW 4
LEPW
Sbjct: 301 LEPW 304
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LEPW 4
LEPW
Sbjct: 301 LEPW 304
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LEPW 4
LEPW
Sbjct: 301 LEPW 304
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PWDAGE 8
PW GE
Sbjct: 182 PWTVGE 187
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 PWDAGEL 9
PWD G +
Sbjct: 1058 PWDEGRV 1064
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 PWDAGEL 9
PWD G +
Sbjct: 1058 PWDEGRV 1064
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 PWDAGEL 9
PWD G +
Sbjct: 1054 PWDEGRV 1060
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 5 DAGELT 10
DAGE+T
Sbjct: 264 DAGEVT 269
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 5 DAGELT 10
DAGE+T
Sbjct: 284 DAGEIT 289
76|Sequence|376|385|AGELTANEEL
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 AGELTANEEL 10
+GEL + E+L
Sbjct: 1870 SGELPSTEDL 1879
77|Sequence|381|390|ANEELEALEN
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 NEELEALE 9
N ELEALE
Sbjct: 760 NGELEALE 767
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 NEELEALE 9
N ELEALE
Sbjct: 760 NGELEALE 767
>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 NEELEALEN 10
N +EALEN
Sbjct: 90 NAAIEALEN 98
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 2 NEELEALE 9
+ ELEALE
Sbjct: 46 DSELEALE 53
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 2 NEELEALE 9
+ ELEALE
Sbjct: 46 DSELEALE 53
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 NEELEALEN 10
N +EALEN
Sbjct: 90 NAAIEALEN 98
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 3 EELEALEN 10
EELEA++N
Sbjct: 373 EELEAIKN 380
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 1 ANEELEALEN 10
+NE +EA+E+
Sbjct: 367 SNENMEAMES 376
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 NEELEALEN 10
+ E+EAL+N
Sbjct: 1034 SREVEALKN 1042
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 NEELEALEN 10
+ E+EAL+N
Sbjct: 1034 SREVEALKN 1042
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 NEELEALEN 10
+ E+EAL+N
Sbjct: 1034 SREVEALKN 1042
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 4 ELEALEN 10
+LEA+EN
Sbjct: 412 DLEAIEN 418
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 EELEAL 8
EELEAL
Sbjct: 1835 EELEAL 1840
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 EELEAL 8
EELEAL
Sbjct: 1835 EELEAL 1840
78|Sequence|386|395|EALENDVSNG
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 LENDVSNG 10
+END++NG
Sbjct: 5204 VENDITNG 5211
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 LENDVSNG 10
+END++NG
Sbjct: 5224 VENDITNG 5231
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 LENDVSNG 10
+END++NG
Sbjct: 5254 VENDITNG 5261
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 EALENDVSN 9
EA+E VSN
Sbjct: 1024 EAMEQGVSN 1032
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 EALENDVSN 9
EA+E VSN
Sbjct: 1024 EAMEQGVSN 1032
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 LENDVSNG 10
L+N VSNG
Sbjct: 678 LDNAVSNG 685
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 LENDVSN 9
LEN VSN
Sbjct: 1167 LENQVSN 1173
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 LENDVSNG 10
L+N VSNG
Sbjct: 678 LDNAVSNG 685
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 LENDVSNG 10
L+N VSNG
Sbjct: 678 LDNAVSNG 685
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 LENDVSNG 10
+E+D++NG
Sbjct: 5166 VEHDINNG 5173
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 EALENDVSN 9
EA+E +SN
Sbjct: 1023 EAMEQGISN 1031
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 LENDVSN 9
LEN +SN
Sbjct: 1167 LENQISN 1173
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 LENDVSN 9
LEN +SN
Sbjct: 1167 LENQISN 1173
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 LENDVSN 9
LEN +SN
Sbjct: 1167 LENQISN 1173
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 5 NDVSNG 10
ND SNG
Sbjct: 205 NDCSNG 210
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 3 LENDVSN 9
+EN++SN
Sbjct: 45 IENEISN 51
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LENDVSN 9
+EN++SN
Sbjct: 45 IENEISN 51
79|Sequence|391|400|DVSNGWDPND
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VSNGWDPN 9
V +GWDP+
Sbjct: 528 VRSGWDPS 535
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VSNGWDPN 9
V +GWDP+
Sbjct: 534 VRSGWDPS 541
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 SNGWDPN 9
SN W PN
Sbjct: 172 SNKWQPN 178
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 SNGWD 7
SNGWD
Sbjct: 3167 SNGWD 3171
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 SNGWD 7
SNGWD
Sbjct: 3171 SNGWD 3175
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 SNGWD 7
SNGWD
Sbjct: 3171 SNGWD 3175
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DVSNGWDPND 10
D+S G PND
Sbjct: 137 DISIGLTPND 146
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 1 DVSNGWDPND 10
D+S G PND
Sbjct: 137 DISIGLTPND 146
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 1 DVSNGWDPND 10
D+S G PND
Sbjct: 137 DISIGLTPND 146
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DVSNGWDPND 10
D+S G PND
Sbjct: 137 DISIGLTPND 146
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DVSNGWDPND 10
D+S G PND
Sbjct: 137 DISIGLTPND 146
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 1 DVSNGWDPND 10
D+S G PND
Sbjct: 137 DISIGLTPND 146
>sp|BDL35_EBVB9|LATE gene expression regulator BDLF3.5|Epstein-Barr virus (strain
Query: 6 WDPND 10
WDP D
Sbjct: 28 WDPTD 32
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 DVSNGW 6
D+S GW
Sbjct: 380 DISTGW 385
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 DVSNGW 6
D+S GW
Sbjct: 380 DISTGW 385
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 5 GWDP 8
GWDP
Sbjct: 125 GWDP 128
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 DVSNGWDPND 10
DVS+ DP+D
Sbjct: 263 DVSDYPDPSD 272
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 DVSNGWDPND 10
DVS+ DP+D
Sbjct: 263 DVSDYPDPSD 272
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 6 WDPND 10
WDP D
Sbjct: 2820 WDPAD 2824
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 6 WDPND 10
WD ND
Sbjct: 99 WDTND 103
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 WDPND 10
WD ND
Sbjct: 99 WDTND 103
>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12
Query: 5 GWDP 8
GWDP
Sbjct: 208 GWDP 211
>sp|GPX_MCV1|GLUTATHIONE peroxidase|Molluscum contagiosum virus subtype 1
Query: 4 NGWDPN 9
NG++PN
Sbjct: 118 NGFEPN 123
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 2 VSNGW 6
V+NGW
Sbjct: 47 VANGW 51
>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain
Query: 5 GWDPND 10
GW P+D
Sbjct: 18 GWIPSD 23
>sp|NCAP_BUNSH|NUCLEOPROTEIN snowshoe hare
Query: 3 SNGWDPN 9
+NG+DP+
Sbjct: 14 ANGFDPD 20
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 WDPND 10
WD ND
Sbjct: 515 WDAND 519
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 WDPND 10
WD ND
Sbjct: 515 WDAND 519
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 SNGWDP 8
+NGW P
Sbjct: 190 ANGWAP 195
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 6 WDPND 10
WD ND
Sbjct: 505 WDAND 509
>sp|U79_HHV7J|PROTEIN U79|Human herpesvirus 7 (strain JI)
Query: 2 VSNGW 6
+SNGW
Sbjct: 51 LSNGW 55
>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate
Query: 5 GWDPND 10
GW P+D
Sbjct: 18 GWIPSD 23
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DVSNGWD 7
D+S+ WD
Sbjct: 193 DLSSEWD 199
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DVSNGWD 7
D+S+ WD
Sbjct: 193 DLSSEWD 199
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 DVSNGWD 7
D+S+ WD
Sbjct: 193 DLSSEWD 199
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 SNGWDPN 9
S+G DPN
Sbjct: 1272 SHGIDPN 1278
80|Sequence|396|405|WDPNDMFRYN
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 WDPNDMFR 8
WD ND++R
Sbjct: 505 WDANDIYR 512
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WDPNDMFR 8
WD ND++R
Sbjct: 515 WDANDIYR 522
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WDPNDMFR 8
WD ND++R
Sbjct: 515 WDANDIYR 522
>sp|E3GL_ADE05|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 5
Query: 1 WDPNDMFRYN 10
W P D YN
Sbjct: 70 WQPGDTTEYN 79
>sp|SCP_EBVB9|SMALL capsomere-interacting protein|Epstein-Barr virus (strain B95-8)
Query: 3 PNDMFR 8
PND+FR
Sbjct: 36 PNDVFR 41
>sp|E3GL_ADE06|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 6
Query: 1 WDPNDMFRYN 10
W P D YN
Sbjct: 69 WQPGDTNDYN 78
>sp|E3GL_ADE02|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 2
Query: 1 WDPNDMFRYN 10
W P D YN
Sbjct: 69 WQPGDTNDYN 78
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 DPNDMFRY 9
DP+ ++RY
Sbjct: 89 DPDRLYRY 96
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DPNDMFRY 9
DP+ +F+Y
Sbjct: 89 DPDRLFKY 96
Query: 2 DPNDMFR 8
DP D+F+
Sbjct: 1000 DPTDVFQ 1006
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 2 DPNDMFRY 9
DP D+F Y
Sbjct: 212 DPQDLFMY 219
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 WDPNDMFRY 9
WD ND ++
Sbjct: 2444 WDGNDTVKF 2452
>sp|UL91_HHV7J|PROTEIN U62|Human herpesvirus 7 (strain JI)
Query: 4 NDMFRYN 10
ND+ +YN
Sbjct: 61 NDLLKYN 67
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 WDPNDMF 7
WD ND++
Sbjct: 279 WDKNDVY 285
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 WDPNDMF 7
WD ND++
Sbjct: 279 WDKNDVY 285
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 1 WDPNDMF 7
WD ND++
Sbjct: 279 WDKNDVY 285
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 1 WDPNDMF 7
WD ND++
Sbjct: 279 WDKNDVY 285
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 1 WDPNDMF 7
WD ND++
Sbjct: 279 WDKNDVY 285
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 WDPNDMF 7
WD ND++
Sbjct: 279 WDKNDVY 285
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 WDPNDMFRY 9
+DP DM Y
Sbjct: 508 FDPYDMIMY 516
>sp|M1_I97A1|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I97A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I96A3|MATRIX protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I96A2|MATRIX protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I96A0|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I89A2|MATRIX protein 1|Influenza A virus (strain A/Beijing/353/1989
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I88A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/8/1988
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I85A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I85A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I83A8|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I83A1|MATRIX protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I82A9|MATRIX protein 1|Influenza A virus (strain A/Philippines/2/1982
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I82A7|MATRIX protein 1|Influenza A virus (strain A/Swine/Hong
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I80AA|MATRIX protein 1|Influenza A virus (strain A/India/6263/1980
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I80A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I80A2|MATRIX protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I79A0|MATRIX protein 1|Influenza A virus (strain A/Bangkok/1/1979
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I78A8|MATRIX protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I78A7|MATRIX protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I77AB|MATRIX protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I77AA|MATRIX protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I77A9|MATRIX protein 1|Influenza A virus (strain A/Equine/New
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I76A6|MATRIX protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I75A0|MATRIX protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I73A5|MATRIX protein 1|Influenza A virus (strain A/Port
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I72A8|MATRIX protein 1|Influenza A virus (strain A/Udorn/1972
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I72A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I72A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I72A2|MATRIX protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I71A1|MATRIX protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I70A0|MATRIX protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I69A0|MATRIX protein 1|Influenza A virus (strain A/England/878/1969
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I68A6|MATRIX protein 1|Influenza A virus (strain A/Northern
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I68A5|MATRIX protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I68A4|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I68A0|MATRIX protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I67A0|MATRIX protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I60A0|MATRIX protein 1|Influenza A virus (strain A/Ann
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I59A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I57A5|MATRIX protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I57A3|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I57A2|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I57A1|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I57A0|MATRIX protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I54A2|MATRIX protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I51A0|MATRIX protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I50A0|MATRIX protein 1|Influenza A virus (strain A/Fort
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I45A0|MATRIX protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I43A0|MATRIX protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I40A0|MATRIX protein 1|Influenza A virus (strain A/Hickox/1940
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I18A0|MATRIX protein 1|Influenza A virus (strain A/Brevig
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I07A0|MATRIX protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 86 DPNNMDR 92
>sp|M1_I05A1|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I03A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I03A0|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I02A7|MATRIX protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 87 DPNNMDR 93
>sp|M1_I02A6|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I02A5|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I02A4|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I02A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I02A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I02A1|MATRIX protein 1|Influenza A virus (strain A/Guinea
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 82 DPNNMDR 88
>sp|M1_I02A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I01A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I01A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I01A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I01A0|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I00A1|MATRIX protein 1|Influenza A virus (strain A/New
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|M1_I00A0|MATRIX protein 1|Influenza A virus (strain A/Duck/Hong
Query: 2 DPNDMFR 8
DPN+M R
Sbjct: 89 DPNNMDR 95
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 4 NDMFRY 9
ND+F+Y
Sbjct: 856 NDLFKY 861
>sp|PG081_VARV|PROTEIN OPG081|Variola virus
Query: 2 DPNDMF 7
+PND+F
Sbjct: 33 NPNDIF 38
>sp|PG081_VAR67|PROTEIN OPG081|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 DPNDMF 7
+PND+F
Sbjct: 33 NPNDIF 38
>sp|PG081_VACCC|PROTEIN OPG081|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DPNDMF 7
+PND+F
Sbjct: 33 NPNDIF 38
>sp|PG081_MONPV|PROTEIN OPG081|Monkeypox virus (MPXV)
Query: 2 DPNDMF 7
+PND+F
Sbjct: 33 NPNDIF 38
>sp|VPU_HV1JR|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 WDPNDM 6
WD ND+
Sbjct: 76 WDINDL 81
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DPNDMFR 8
DP D+F+
Sbjct: 1000 DPTDVFQ 1006
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DPNDMFR 8
DP D+F+
Sbjct: 1000 DPTDVFQ 1006
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DPNDMFR 8
DP D+F+
Sbjct: 1000 DPTDVFQ 1006
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 5 DMFRYN 10
D+FRY+
Sbjct: 431 DLFRYS 436
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 WDPND 5
WD ND
Sbjct: 99 WDTND 103
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 1 WDPND 5
WD ND
Sbjct: 99 WDTND 103
>sp|PG163_MONPV|PROTEIN OPG163|Monkeypox virus (MPXV)
Query: 2 DPNDMFRYN 10
D ND+ R+N
Sbjct: 69 DSNDLARFN 77
>sp|PG163_VACCC|PROTEIN OPG163|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DPNDMFRYN 10
D ND+ R+N
Sbjct: 69 DSNDLARFN 77
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 2 DPNDMFRY 9
+P D+F Y
Sbjct: 203 NPQDLFMY 210
>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 DPNDMFRY 9
+P D+F Y
Sbjct: 204 NPQDLFMY 211
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DPNDMFR 8
+P DMF+
Sbjct: 735 NPQDMFK 741
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 2 DPNDMFRYN 10
DPND ++
Sbjct: 247 DPNDTVNFS 255
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 2 DPNDMFRYN 10
DPND ++
Sbjct: 247 DPNDTVNFS 255
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 2 DPNDMFRYN 10
DPND ++
Sbjct: 247 DPNDTVNFS 255
81|Sequence|401|410|MFRYNEENYG
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 4 YNEENYG 10
YN ENYG
Sbjct: 339 YNWENYG 345
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 5 NEENYG 10
NEEN+G
Sbjct: 199 NEENFG 204
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 NEENYG 10
NE+NYG
Sbjct: 285 NEDNYG 290
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 MFRYNEENY 9
+FRYN Y
Sbjct: 482 IFRYNTNTY 490
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 MFRYNEENY 9
+FRYN Y
Sbjct: 482 IFRYNTNTY 490
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 5 NEENYG 10
NE+NYG
Sbjct: 286 NEDNYG 291
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 5 NEENYG 10
NE+NYG
Sbjct: 286 NEDNYG 291
>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)
Query: 2 FRYNEENYG 10
F YN +YG
Sbjct: 172 FVYNGSDYG 180
>sp|GI_HHV23|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain 333)
Query: 2 FRYNEENYG 10
F YN +YG
Sbjct: 172 FVYNGSDYG 180
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 MFRYNEENY 9
+FRYN Y
Sbjct: 472 IFRYNTNTY 480
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 MFRYNEENY 9
+FRYN + +
Sbjct: 1461 LFRYNSKRF 1469
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 4 YNEENY 9
YN+EN+
Sbjct: 656 YNKENF 661
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 YNEENY 9
YN +NY
Sbjct: 5511 YNSQNY 5516
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 YNEENY 9
YN +NY
Sbjct: 5486 YNSQNY 5491
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 MFRYNEENY 9
+FRYN + +
Sbjct: 1486 IFRYNSKRF 1494
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 MFRYNEENY 9
+FRYN + +
Sbjct: 1486 IFRYNSKRF 1494
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 YNEENY 9
YN +NY
Sbjct: 5849 YNSQNY 5854
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 YNEENY 9
YN +NY
Sbjct: 5869 YNSQNY 5874
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 YNEENY 9
YN +NY
Sbjct: 5899 YNSQNY 5904
82|Sequence|406|415|EENYGVVSTY
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 EENYGVVSTY 10
EEN VVST+
Sbjct: 651 EENEAVVSTH 660
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 EENYGVVSTY 10
EEN VVST+
Sbjct: 651 EENEAVVSTH 660
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 1 EENYGVVSTY 10
EEN VVST+
Sbjct: 651 EENEAVVSTH 660
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 ENYGVVSTY 10
+N GVV+TY
Sbjct: 6183 KNLGVVATY 6191
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 ENYGVVSTY 10
+N GVV+TY
Sbjct: 6158 KNLGVVATY 6166
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 NYGVVSTY 10
NY VS+Y
Sbjct: 1995 NYPTVSSY 2002
83|Sequence|411|420|VVSTYDSSLS
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 STYDSSLS 10
S+YD SLS
Sbjct: 2026 SSYDGSLS 2033
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1976 SGYDASLS 1983
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1966 SGYDASLS 1973
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1955 SGYDASLS 1962
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1969 SGYDASLS 1976
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1966 SGYDASLS 1973
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1957 SGYDASLS 1964
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1957 SGYDASLS 1964
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1958 SGYDASLS 1965
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1958 SGYDASLS 1965
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1974 SGYDASLS 1981
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1958 SGYDASLS 1965
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1956 SGYDASLS 1963
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 VVSTYDSS 8
V++TYD+S
Sbjct: 525 VLATYDTS 532
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 VVSTYDSS 8
V++TYD+S
Sbjct: 525 VLATYDTS 532
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1967 SGYDASLS 1974
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1956 SGYDASLS 1963
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 1 VVSTYDSS 8
V++TYD+S
Sbjct: 525 VLATYDTS 532
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 1 VVSTYDSS 8
V++TYD+S
Sbjct: 525 VLATYDTS 532
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1966 SGYDASLS 1973
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 1 VVSTYDSS 8
V++TYD+S
Sbjct: 525 VLATYDTS 532
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 VVSTYDSS 8
V++TYD+S
Sbjct: 525 VLATYDTS 532
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1966 SGYDASLS 1973
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1964 SGYDASLS 1971
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1966 SGYDASLS 1973
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1968 SGYDASLS 1975
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1960 SGYDASLS 1967
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1966 SGYDASLS 1973
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 STYDSSLS 10
S YD+SLS
Sbjct: 1966 SGYDASLS 1973
84|Sequence|416|425|DSSLSSYTVP
>sp|UL24_HHV11|PROTEIN UL24|Human herpesvirus 1 (strain 17)
Query: 3 SLSSYTVP 10
SLS+YTVP
Sbjct: 183 SLSTYTVP 190
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 3 SLSSYTVP 10
S SSYTVP
Sbjct: 443 STSSYTVP 450
>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14
Query: 3 SLSSYTVP 10
S SSYTVP
Sbjct: 442 STSSYTVP 449
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 3 SLSSYTVP 10
LSS+T+P
Sbjct: 19 ELSSFTIP 26
>sp|UL24_HHV2H|PROTEIN UL24|Human herpesvirus 2 (strain HG52)
Query: 3 SLSSYTVP 10
SLS+Y VP
Sbjct: 194 SLSTYAVP 201
>sp|TRM2_VZVD|TRIPARTITE terminase subunit 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 DSSLSSYTVP 10
DS S+Y VP
Sbjct: 116 DSEKSAYVVP 125
>sp|TAT_HV2D1|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 1 DSSLSSYTVP 10
+SSL SY P
Sbjct: 9 ESSLESYNEP 18
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 3 SLSSYTVP 10
S +SYTVP
Sbjct: 443 STTSYTVP 450
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 3 SLSSYTVP 10
S +SYTVP
Sbjct: 447 STTSYTVP 454
>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19
Query: 3 SLSSYTVP 10
S S+YTVP
Sbjct: 443 STSTYTVP 450
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 3 SLSSYTVP 10
S +SYTVP
Sbjct: 443 STTSYTVP 450
>sp|VL2_HPV47|MINOR capsid protein L2|Human papillomavirus 47
Query: 3 SLSSYTVP 10
S +SYTVP
Sbjct: 443 STTSYTVP 450
>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25
Query: 3 SLSSYTVP 10
S S+YTVP
Sbjct: 443 STSTYTVP 450
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 3 SLSSYTVP 10
S S+YTVP
Sbjct: 441 STSTYTVP 448
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 3 SLSSYTVP 10
S +SYTVP
Sbjct: 443 STTSYTVP 450
>sp|TAT_HV2G1|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 1 DSSLSSYTVP 10
+SSL SY P
Sbjct: 9 ESSLESYNEP 18
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 3 SLSSYTVP 10
S +SYTVP
Sbjct: 443 STNSYTVP 450
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 3 SLSSYTVP 10
S +SYTVP
Sbjct: 443 STNSYTVP 450
85|Sequence|421|430|SYTVPLERDN
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 YTVPLERDN 10
+++PLER N
Sbjct: 374 FSIPLERYN 382
>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 SYTVPLE 7
S+TVPLE
Sbjct: 4 SWTVPLE 10
>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 SYTVPLE 7
S+TVPLE
Sbjct: 4 SWTVPLE 10
>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 SYTVPLE 7
S+TVPLE
Sbjct: 4 SWTVPLE 10
>sp|UL24_HHV11|PROTEIN UL24|Human herpesvirus 1 (strain 17)
Query: 1 SYTVPLE 7
+YTVP+E
Sbjct: 186 TYTVPIE 192
>sp|HBSAG_HBVG3|LARGE envelope protein|Hepatitis B virus genotype G
Query: 1 SYTVPLE 7
S+TVPLE
Sbjct: 4 SWTVPLE 10
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 3 TVPLERDN 10
T+P ER+N
Sbjct: 184 TIPQEREN 191
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 TVPLERDN 10
T+P ER+N
Sbjct: 468 TIPQEREN 475
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 3 TVPLERDN 10
T+P ER+N
Sbjct: 468 TIPQEREN 475
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 2 YTVPLE 7
YT+P+E
Sbjct: 689 YTIPME 694
>sp|PG176_VACCC|PROTEIN OPG176|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YTVPLERD 9
YTV +RD
Sbjct: 37 YTVEFDRD 44
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 1 SYTVPLERD 9
S+T+P++ D
Sbjct: 22 SFTIPVKSD 30
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 4 VPLERDN 10
VP+++DN
Sbjct: 177 VPIDKDN 183
>sp|PG176_VAR67|PROTEIN OPG176|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 YTVPLERD 9
YTV +RD
Sbjct: 37 YTVEFDRD 44
>sp|PG176_MONPV|PROTEIN OPG176|Monkeypox virus (MPXV)
Query: 2 YTVPLERD 9
YTV +RD
Sbjct: 37 YTVEFDRD 44
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 SYTVPLER 8
+YT+P+E+
Sbjct: 504 AYTLPVEK 511
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 VPLERDN 10
VP E DN
Sbjct: 227 VPCENDN 233
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 VPLERDN 10
VP E DN
Sbjct: 227 VPCENDN 233
>sp|GI_VZVO|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SYTVPLERDN 10
S +P++ DN
Sbjct: 38 SILIPMQNDN 47
>sp|GI_VZVD|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SYTVPLERDN 10
S +P++ DN
Sbjct: 38 SILIPMQNDN 47
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPLERDN 10
VP++ DN
Sbjct: 180 VPIDNDN 186
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 4 VPLERDN 10
VP E DN
Sbjct: 227 VPCENDN 233
86|Sequence|426|435|LERDNSEEFL
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 4 DNSEEF 9
DN+EEF
Sbjct: 491 DNAEEF 496
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 4 DNSEEF 9
DN+EEF
Sbjct: 491 DNAEEF 496
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 4 DNSEEF 9
DN+EEF
Sbjct: 491 DNAEEF 496
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 4 DNSEEF 9
DN+EEF
Sbjct: 491 DNAEEF 496
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 4 DNSEEF 9
DN+EEF
Sbjct: 491 DNAEEF 496
>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P
Query: 1 LERDNSE 7
ERDNS+
Sbjct: 290 FERDNSD 296
87|Sequence|431|440|SEEFLKREAR
***** No hits found ******
88|Sequence|436|445|KREARANQLA
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 KREARANQLA 10
KRE+ NQ+A
Sbjct: 1370 KRESVVNQIA 1379
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 KREARANQLA 10
KRE+ NQ+A
Sbjct: 1370 KRESVVNQIA 1379
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 3 EARANQL 9
EAR NQ+
Sbjct: 572 EARTNQM 578
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 3 EARANQL 9
EAR NQ+
Sbjct: 572 EARTNQM 578
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 EARANQL 9
EAR NQ+
Sbjct: 572 EARTNQI 578
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 REARANQLA 10
REA +QLA
Sbjct: 3209 REAACSQLA 3217
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 REARANQLA 10
REA +QLA
Sbjct: 3247 REAACSQLA 3255
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 REARANQLA 10
REA +QLA
Sbjct: 3267 REAACSQLA 3275
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 REARANQLA 10
REA +QLA
Sbjct: 3297 REAACSQLA 3305
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 REARANQLA 10
REA +QLA
Sbjct: 3209 REAACSQLA 3217
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 REARANQLA 10
REA +QLA
Sbjct: 3247 REAACSQLA 3255
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 REARANQLA 10
REA +QLA
Sbjct: 3267 REAACSQLA 3275
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 REARANQLA 10
REA +QLA
Sbjct: 3297 REAACSQLA 3305
89|Sequence|441|450|ANQLAEEIES
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 NQLAEEIE 9
N+LAEE E
Sbjct: 1498 NKLAEEEE 1505
90|Sequence|446|455|EEIESSAQYK
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 EIESSAQYK 10
EIES YK
Sbjct: 1360 EIESMESYK 1368
91|Sequence|451|460|SAQYKARVAL
***** No hits found ******
92|Sequence|456|465|ARVALENDDR
***** No hits found ******
93|Sequence|461|470|ENDDRSEEEK
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ENDDRSEE 8
END R+EE
Sbjct: 2649 ENDIRTEE 2656
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 NDDRSEEEK 10
+D RSEE+K
Sbjct: 780 DDPRSEEDK 788
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 NDDRSEEEK 10
+D RSEE+K
Sbjct: 780 DDPRSEEDK 788
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 1 ENDDRSEEE 9
EN D SEE+
Sbjct: 157 ENSDSSEED 165
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 2 NDDRSEE 8
NDDRS +
Sbjct: 328 NDDRSSK 334
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 3 DDRSEEEK 10
DDR ++EK
Sbjct: 84 DDRDKQEK 91
>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967
Query: 2 NDDRS 6
NDDRS
Sbjct: 328 NDDRS 332
94|Sequence|466|475|SEEEKYTAVQ
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 EEEKYTAV 9
EE+KYT +
Sbjct: 1061 EEQKYTPL 1068
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 1 SEEEKYTA 8
SEEE+Y A
Sbjct: 137 SEEEEYVA 144
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 EEKYTAVQ 10
EKY AVQ
Sbjct: 352 HEKYEAVQ 359
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 EEKYTAVQ 10
EKY AVQ
Sbjct: 352 HEKYEAVQ 359
95|Sequence|471|480|YTAVQRNSSE
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 YTAVQRNSSE 10
Y+A+ R SSE
Sbjct: 124 YSALPRESSE 133
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 YTAVQRN 7
+TA+QRN
Sbjct: 844 WTALQRN 850
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 YTAVQRN 7
+TA+QRN
Sbjct: 844 WTALQRN 850
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 YTAVQRNSSE 10
YT QRN S+
Sbjct: 657 YTGKQRNLSD 666
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 YTAVQRNSSE 10
YT QRN S+
Sbjct: 657 YTGKQRNLSD 666
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 YTAVQRNSSE 10
YT QRN S+
Sbjct: 657 YTGKQRNLSD 666
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 YTAVQRN 7
+TA+QRN
Sbjct: 844 WTALQRN 850
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 YTAVQRN 7
+TA+QRN
Sbjct: 844 WTALQRN 850
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 YTAVQRN 7
+TA+QRN
Sbjct: 844 WTALQRN 850
96|Sequence|476|485|RNSSEREGHS
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 NSSEREGH 9
++S+REGH
Sbjct: 1747 SASKREGH 1754
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 NSSEREGH 9
++S+REGH
Sbjct: 1747 SASKREGH 1754
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 4 SEREGH 9
++REGH
Sbjct: 1119 ADREGH 1124
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SSEREGH 9
S E+EGH
Sbjct: 923 SQEQEGH 929
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SSEREGH 9
S E+EGH
Sbjct: 921 SQEQEGH 927
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SSEREGH 9
S E+EGH
Sbjct: 922 SQEQEGH 928
97|Sequence|481|490|REGHSINTRE
>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967
Query: 4 HSINTRE 10
HSI TRE
Sbjct: 36 HSIQTRE 42
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 4 HSINTRE 10
HSI TRE
Sbjct: 36 HSIQTRE 42
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 REGHSI 6
REGH I
Sbjct: 1751 REGHQI 1756
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 REGHSI 6
REGH I
Sbjct: 1751 REGHQI 1756
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 1 REGHSINT 8
R+G S NT
Sbjct: 474 RQGQSANT 481
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 1 REGHSINT 8
R+G S NT
Sbjct: 459 RQGQSANT 466
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 4 HSINTRE 10
HSINT +
Sbjct: 515 HSINTNQ 521
98|Sequence|486|495|INTRENKYIP
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 1 INTRENKYIP 10
++ R+N Y+P
Sbjct: 132 VDARDNSYMP 141
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 NTRENKYIP 10
N EN YIP
Sbjct: 2138 NNLENSYIP 2146
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 INTRENKYIP 10
+ TR+ K++P
Sbjct: 217 LTTRQEKWLP 226
>sp|PG062_VACCP|TRUNCATED phosphoprotein OPG062|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 INTRENKYI 9
INT+E +Y+
Sbjct: 14 INTKEARYL 22
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 ENKYIP 10
ENK++P
Sbjct: 5429 ENKFVP 5434
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 ENKYIP 10
ENK++P
Sbjct: 5454 ENKFVP 5459
>sp|PG062_VARV|PHOSPHOPROTEIN OPG062|Variola virus
Query: 1 INTRENKYI 9
INT+E +Y+
Sbjct: 14 INTKEGRYL 22
>sp|PG062_VAR67|PHOSPHOPROTEIN OPG062|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 INTRENKYI 9
INT+E +Y+
Sbjct: 14 INTKEGRYL 22
>sp|PG062_VACCT|PHOSPHOPROTEIN OPG062|Vaccinia virus (strain Tian Tan)
Query: 1 INTRENKYI 9
INT+E +Y+
Sbjct: 14 INTKEGRYL 22
>sp|PG062_VACCC|PHOSPHOPROTEIN OPG062|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 INTRENKYI 9
INT+E +Y+
Sbjct: 14 INTKEGRYL 22
>sp|PG062_MONPV|PHOSPHOPROTEIN OPG062|Monkeypox virus (MPXV)
Query: 1 INTRENKYI 9
INT+E +Y+
Sbjct: 14 INTKEGRYL 22
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 NTRENKYIP 10
N R KY+P
Sbjct: 3529 NVRMLKYVP 3537
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 1 INTREN 6
INTR+N
Sbjct: 520 INTRDN 525
99|Sequence|491|500|NKYIPPGQRN
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 4 IPPGQR 9
+PPG+R
Sbjct: 1602 VPPGER 1607
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 4 IPPGQR 9
+PPG+R
Sbjct: 1602 VPPGER 1607
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 4 IPPGQR 9
+PPG+R
Sbjct: 1598 VPPGER 1603
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 KYIPPGQRN 10
KY+PP +RN
Sbjct: 3534 KYVPP-KRN 3541
>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)
Query: 1 NKYIPPGQRN 10
N PP +RN
Sbjct: 366 NDTTPPSERN 375
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 KYIPPGQR 9
+Y+ PG+R
Sbjct: 1500 RYVSPGER 1507
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 YIPPGQRN 10
Y+PPG N
Sbjct: 719 YVPPGAPN 726
Query: 3 YIPPGQR 9
Y PPG R
Sbjct: 462 YTPPGAR 468
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 KYIPPGQR 9
+Y+ PG+R
Sbjct: 1500 RYVSPGER 1507
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 KYIPPGQR 9
+Y+ PG+R
Sbjct: 1505 RYVSPGER 1512
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 YIPPG 7
YIPPG
Sbjct: 715 YIPPG 719
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 1659 NMYIPVGQ 1666
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 YIPPG 7
YIPPG
Sbjct: 715 YIPPG 719
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 1669 NMYIPVGQ 1676
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 KYIPPGQR 9
+Y+ PG+R
Sbjct: 1500 RYVTPGER 1507
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 1657 NMYIPVGQ 1664
Query: 3 YIPPG 7
Y+PPG
Sbjct: 714 YVPPG 718
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 YIPPG 7
YIPPG
Sbjct: 714 YIPPG 718
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 1659 NMYIPVGQ 1666
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 YIPPG 7
YIPPG
Sbjct: 735 YIPPG 739
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 KYIPPGQR 9
+Y+ PG+R
Sbjct: 1506 RYVTPGER 1513
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 1653 NMYIPVGQ 1660
Query: 3 YIPPG 7
Y+PPG
Sbjct: 718 YVPPG 722
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 1662 NMYIPVGQ 1669
Query: 3 YIPPG 7
Y+PPG
Sbjct: 717 YVPPG 721
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 1667 NMYIPVGQ 1674
Query: 3 YIPPG 7
Y+PPG
Sbjct: 714 YVPPG 718
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 YIPPG 7
YIPPG
Sbjct: 715 YIPPG 719
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 1661 NMYIPVGQ 1668
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 1660 NMYIPVGQ 1667
Query: 3 YIPPG 7
Y+PPG
Sbjct: 715 YVPPG 719
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 1650 NMYIPVGQ 1657
Query: 3 YIPPG 7
Y+PPG
Sbjct: 715 YVPPG 719
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 1650 NMYIPVGQ 1657
Query: 3 YIPPG 7
Y+PPG
Sbjct: 712 YVPPG 716
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 1649 NMYIPVGQ 1656
Query: 3 YIPPG 7
Y+PPG
Sbjct: 714 YVPPG 718
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 1665 NMYIPVGQ 1672
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 1651 NMYIPVGQ 1658
Query: 3 YIPPG 7
Y+PPG
Sbjct: 713 YVPPG 717
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 1651 NMYIPVGQ 1658
Query: 3 YIPPG 7
Y+PPG
Sbjct: 713 YVPPG 717
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 YIPPG 7
YIPPG
Sbjct: 741 YIPPG 745
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 1651 NMYIPVGQ 1658
Query: 3 YIPPG 7
Y+PPG
Sbjct: 713 YVPPG 717
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 YIPPG 7
YIPPG
Sbjct: 735 YIPPG 739
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 YIPPG 7
YIPPG
Sbjct: 735 YIPPG 739
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 YIPPG 7
YIPPG
Sbjct: 737 YIPPG 741
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 YIPPG 7
YIPPG
Sbjct: 737 YIPPG 741
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 1648 NMYIPVGQ 1655
Query: 3 YIPPG 7
Y+PPG
Sbjct: 713 YVPPG 717
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 YIPPGQRN 10
Y PP +RN
Sbjct: 432 YAPPIERN 439
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 YIPPG 7
Y+PPG
Sbjct: 714 YVPPG 718
Query: 1 NKYIPPGQ 8
N YIP G+
Sbjct: 1649 NMYIPVGR 1656
>sp|PG089_MONPV|PUTATIVE nuclease OPG089|Monkeypox virus (MPXV)
Query: 3 YIPPGQ 8
YIPP Q
Sbjct: 308 YIPPCQ 313
>sp|DUT_VARV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus
Query: 4 IPPGQR 9
IPPG+R
Sbjct: 42 IPPGER 47
>sp|DUT_VAR67|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus (isolate
Query: 4 IPPGQR 9
IPPG+R
Sbjct: 42 IPPGER 47
>sp|PG089_VARV|PUTATIVE nuclease OPG089|Variola virus
Query: 3 YIPPGQ 8
YIPP Q
Sbjct: 308 YIPPCQ 313
>sp|PG089_VAR67|PUTATIVE nuclease OPG089|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 YIPPGQ 8
YIPP Q
Sbjct: 308 YIPPCQ 313
>sp|DUT_MONPV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Monkeypox virus (MPXV)
Query: 4 IPPGQR 9
IPPG+R
Sbjct: 46 IPPGER 51
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 6 PGQRN 10
PGQRN
Sbjct: 293 PGQRN 297
>sp|DUT_CWPXG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Cowpox virus (strain GRI-90 /
Query: 4 IPPGQR 9
IPPG+R
Sbjct: 42 IPPGER 47
>sp|DUT_VACCP|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain L-IVP)
Query: 4 IPPGQR 9
IPPG+R
Sbjct: 42 IPPGER 47
>sp|DUT_VACCC|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 4 IPPGQR 9
IPPG+R
Sbjct: 42 IPPGER 47
>sp|DUT_VACCA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 4 IPPGQR 9
IPPG+R
Sbjct: 42 IPPGER 47
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 YIPPGQR 9
Y PPG R
Sbjct: 462 YTPPGTR 468
Query: 3 YIPPGQRN 10
Y+PPG N
Sbjct: 719 YVPPGAPN 726
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 YIPPG 7
Y+PPG
Sbjct: 723 YVPPG 727
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 YIPPG 7
Y+PPG
Sbjct: 720 YVPPG 724
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 YIPPG 7
Y+PPG
Sbjct: 717 YVPPG 721
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 YIPPG 7
Y+PPG
Sbjct: 720 YVPPG 724
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 YIPPG 7
Y+PPG
Sbjct: 738 YVPPG 742
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 YIPPG 7
Y+PPG
Sbjct: 738 YVPPG 742
>sp|POLG_ECHO9|GENOME polyprotein|Echo 9 virus (EV-9) (Coxsackievirus
Query: 1 NKYIPPGQ 8
N YIP GQ
Sbjct: 133 NMYIPVGQ 140
>sp|ORF2_VZVO|MEMBRANE protein 2|Varicella-zoster virus (strain Oka vaccine)
Query: 2 KYIPPGQR 9
KY PG+R
Sbjct: 72 KYSKPGER 79
>sp|ORF2_VZVD|MEMBRANE protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 KYIPPGQR 9
KY PG+R
Sbjct: 72 KYSKPGER 79
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 YIPPG 7
Y+PPG
Sbjct: 712 YVPPG 716
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 4 IPPGQR 9
+PPG+R
Sbjct: 551 LPPGER 556
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 3 YIPPG 7
YIPPG
Sbjct: 382 YIPPG 386
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 NKYIPP 6
++YIPP
Sbjct: 542 SRYIPP 547
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 3 YIPPG 7
YIPPG
Sbjct: 385 YIPPG 389
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 NKYIPPGQRN 10
N Y+PP N
Sbjct: 1932 NVYLPPMSTN 1941
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 NKYIPPGQRN 10
N Y+PP N
Sbjct: 1932 NVYLPPMSTN 1941
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 3 YIPPG 7
YIPPG
Sbjct: 381 YIPPG 385
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 NKYIPPGQ 8
++YIPP +
Sbjct: 472 SQYIPPSR 479
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 NKYIPPGQ 8
++YIPP +
Sbjct: 472 SQYIPPSR 479
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 NKYIPPGQ 8
++YIPP +
Sbjct: 472 SQYIPPSR 479
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 3 YIPPG 7
Y+PPG
Sbjct: 717 YVPPG 721
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 5 PPGQR 9
PPG+R
Sbjct: 430 PPGER 434
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 YIPPG 7
Y+PPG
Sbjct: 712 YVPPG 716
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 YIPPG 7
Y+PPG
Sbjct: 717 YVPPG 721
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 KYIPPG 7
KY PPG
Sbjct: 441 KYWPPG 446
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 KYIPPG 7
KY PPG
Sbjct: 441 KYWPPG 446
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 NKYIPPGQ 8
N+++P G+
Sbjct: 1578 NRFVPVGE 1585
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 NKYIPPGQ 8
N+++P G+
Sbjct: 1578 NRFVPVGE 1585
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 YIPPGQRN 10
Y+P +RN
Sbjct: 1049 YVPSQERN 1056
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 NKYIPP 6
N Y+PP
Sbjct: 1932 NVYLPP 1937
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 NKYIPP 6
N Y+PP
Sbjct: 434 NVYLPP 439
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 NKYIPP 6
N Y+PP
Sbjct: 429 NVYLPP 434
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 NKYIPP 6
N Y+PP
Sbjct: 426 NVYLPP 431
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 NKYIPP 6
N Y+PP
Sbjct: 429 NVYLPP 434
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 KYIPPGQRN 10
KY+P G N
Sbjct: 642 KYVPQGVDN 650
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 NKYIPP 6
N Y+PP
Sbjct: 432 NVYLPP 437
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 NKYIPP 6
N Y+PP
Sbjct: 432 NVYLPP 437
100|Sequence|496|505|PGQRNREVIS
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 PGQRNREVIS 10
PGQ NRE ++
Sbjct: 165 PGQDNRENVA 174
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 PGQRNREVIS 10
PG NRE IS
Sbjct: 140 PGTDNRECIS 149
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 PGQRNREVI 9
PG++ REV+
Sbjct: 218 PGEQGREVV 226
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 1 PGQRNREVIS 10
PG NRE +S
Sbjct: 166 PGSDNRECLS 175
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 1 PGQRNREVIS 10
PG NRE +S
Sbjct: 169 PGTDNRECLS 178
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 1 PGQRNREVIS 10
PG NRE +S
Sbjct: 140 PGADNRECLS 149
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 GQRNREVIS 10
G+R R+VIS
Sbjct: 2669 GERTRKVIS 2677
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 1 PGQRNREVIS 10
PG NRE +S
Sbjct: 138 PGTDNRENVS 147
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 PGQRNREVI 9
P QRN V+
Sbjct: 173 PSQRNEGVV 181
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 1 PGQRNREVIS 10
PG NRE +S
Sbjct: 138 PGTDNRENVS 147
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 PGQRNREV 8
PG+ REV
Sbjct: 218 PGETGREV 225
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 PGQRNREV 8
PG+ REV
Sbjct: 218 PGEAGREV 225
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 PGQRNREVIS 10
PGQ +RE ++
Sbjct: 137 PGQDSRENVA 146
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 1 PGQRNREVIS 10
PGQ +RE ++
Sbjct: 137 PGQDSRENVA 146
>sp|NCAP_BUNYW|NUCLEOPROTEIN virus (BUNV)
Query: 1 PGQRNREV 8
PG RN V
Sbjct: 78 PGNRNNPV 85
101|Sequence|501|510|REVISWGSGR
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 REVISWGSGR 10
R+V+SW S R
Sbjct: 3391 RQVLSWMSKR 3400
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 ISWGSG 9
+SWGSG
Sbjct: 48 VSWGSG 53
>sp|IR04_HCMVA|UNCHARACTERIZED protein IRL4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 SWGSGR 10
SWG+GR
Sbjct: 45 SWGTGR 50
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 REVISWGSGR 10
REV+ W S +
Sbjct: 1438 REVVKWFSDK 1447
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 REVISWGSGR 10
REV+ W S +
Sbjct: 1439 REVVDWFSDK 1448
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 REVISWGSGR 10
R+V+SW R
Sbjct: 3479 RQVLSWLGKR 3488
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 5 SWGSG 9
+WGSG
Sbjct: 49 TWGSG 53
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 6 WGSGR 10
WG GR
Sbjct: 332 WGKGR 336
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 4 ISWGSG 9
++WGSG
Sbjct: 134 LAWGSG 139
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 6 WGSGR 10
WG GR
Sbjct: 319 WGKGR 323
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 6 WGSGR 10
WG GR
Sbjct: 331 WGKGR 335
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 6 WGSGR 10
WG GR
Sbjct: 332 WGKGR 336
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 6 WGSGR 10
WG GR
Sbjct: 319 WGKGR 323
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 6 WGSGR 10
WG GR
Sbjct: 319 WGKGR 323
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 6 WGSGR 10
WG GR
Sbjct: 319 WGKGR 323
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 6 WGSGR 10
WG GR
Sbjct: 319 WGKGR 323
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 6 WGSGR 10
WG GR
Sbjct: 319 WGKGR 323
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 6 WGSGR 10
WG GR
Sbjct: 319 WGKGR 323
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 6 WGSGR 10
WG GR
Sbjct: 325 WGKGR 329
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 VISWGSGR 10
++SW SG+
Sbjct: 5134 LLSWESGK 5141
>sp|VE6_HPV41|PROTEIN E6|Human papillomavirus type 41
Query: 4 ISWGSG 9
+SWG G
Sbjct: 64 LSWGEG 69
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 6 WGSGR 10
WG GR
Sbjct: 325 WGKGR 329
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 4 ISWGSG 9
+ WGSG
Sbjct: 724 VEWGSG 729
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 EVISWGSG 9
E++ +GSG
Sbjct: 1292 EIVRYGSG 1299
>sp|V_PI4HB|NON-STRUCTURAL protein V|Human parainfluenza 4b virus (strain
Query: 4 ISWGSGR 10
ISW +GR
Sbjct: 184 ISWVNGR 190
>sp|V_PI4HA|NON-STRUCTURAL protein V|Human parainfluenza 4a virus (strain
Query: 4 ISWGSGR 10
ISW +GR
Sbjct: 184 ISWVNGR 190
102|Sequence|506|515|WGSGRQNSPR
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 2 GSGRQNSPR 10
G GR+ SPR
Sbjct: 195 GKGRKLSPR 203
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 4 GRQNSP 9
GR+NSP
Sbjct: 484 GRRNSP 489
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 WGSGRQN 7
WG GR++
Sbjct: 332 WGKGRES 338
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 1 WGSGRQN 7
WG GR++
Sbjct: 332 WGKGRES 338
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 WGSGRQN 7
WG GR++
Sbjct: 319 WGKGRES 325
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 1 WGSGRQNS 8
WGSG Q++
Sbjct: 726 WGSGEQST 733
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 1 WGSGRQN 7
WG GR++
Sbjct: 325 WGKGRES 331
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 1 WGSGRQN 7
WG GR++
Sbjct: 325 WGKGRES 331
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 WGSGRQN 7
WG GR++
Sbjct: 319 WGKGRES 325
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 1 WGSGRQN 7
WG GR++
Sbjct: 319 WGKGRKS 325
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 1 WGSGRQN 7
WG GR++
Sbjct: 331 WGKGRKS 337
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 1 WGSGRQN 7
WG GR++
Sbjct: 319 WGKGRKS 325
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 1 WGSGRQN 7
WG GR++
Sbjct: 319 WGKGRKS 325
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 1 WGSGRQN 7
WG GR++
Sbjct: 319 WGKGRKS 325
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 1 WGSGRQN 7
WG GR++
Sbjct: 319 WGKGRKS 325
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 GSGRQNSP 9
GSGR SP
Sbjct: 678 GSGRTFSP 685
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 1 WGSGRQNSPR 10
WG R PR
Sbjct: 405 WGGRRARPPR 414
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 1 WGSGRQ--NSP 9
WG G+Q N+P
Sbjct: 165 WGKGKQCTNTP 175
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 1 WGSGRQ--NSP 9
WG G+Q N+P
Sbjct: 165 WGKGKQCTNTP 175
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 WGSGRQNSP 9
WG G N P
Sbjct: 369 WGDGGLNDP 377
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 WGSGRQNSP 9
WG G N P
Sbjct: 369 WGDGGLNDP 377
>sp|IR04_HCMVA|UNCHARACTERIZED protein IRL4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WGSGRQ 6
WG+GR+
Sbjct: 46 WGTGRR 51
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 1 WGSGRQ 6
WG G+Q
Sbjct: 166 WGKGKQ 171
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 WGSGRQNSPR 10
WGS + PR
Sbjct: 2233 WGSNQDFHPR 2242
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 WGSGRQNSPR 10
WGS + PR
Sbjct: 2229 WGSNQDFHPR 2238
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 1 WGSGRQ 6
WG G+Q
Sbjct: 166 WGQGKQ 171
103|Sequence|511|520|QNSPRMGQPG
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 QNSPRMGQPG 10
Q+SP + +PG
Sbjct: 360 QSSPNVKEPG 369
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 QNSPRM 6
QN PRM
Sbjct: 2593 QNDPRM 2598
Query: 2 NSPRMGQPG 10
NSP + PG
Sbjct: 627 NSPIISHPG 635
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 QNSPRM 6
QN PRM
Sbjct: 2593 QNDPRM 2598
Query: 2 NSPRMGQPG 10
NSP + PG
Sbjct: 627 NSPIISHPG 635
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 4 PRMGQP 9
PR+G P
Sbjct: 395 PRLGSP 400
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 NSPRMGQPG 10
N+P G PG
Sbjct: 336 NNPITGSPG 344
>sp|VPR_HV2UC|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 5 RMGQPG 10
R+GQPG
Sbjct: 85 RIGQPG 90
>sp|VPR_HV2EH|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 5 RMGQPG 10
R+GQPG
Sbjct: 85 RIGQPG 90
104|Sequence|516|525|MGQPGSGSMP
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 GQPGSG 7
GQPGSG
Sbjct: 1354 GQPGSG 1359
Query: 2 GQPGSG 7
G PGSG
Sbjct: 719 GVPGSG 724
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 GQPGSG 7
GQPGSG
Sbjct: 1356 GQPGSG 1361
Query: 2 GQPGSG 7
G PGSG
Sbjct: 721 GVPGSG 726
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 GQPGSG 7
GQPGSG
Sbjct: 1354 GQPGSG 1359
Query: 2 GQPGSG 7
G PGSG
Sbjct: 719 GVPGSG 724
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 GQPGSG 7
GQPG+G
Sbjct: 1354 GQPGAG 1359
Query: 2 GQPGSG 7
G PGSG
Sbjct: 719 GVPGSG 724
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 GQPGSG 7
GQPG+G
Sbjct: 1354 GQPGAG 1359
Query: 2 GQPGSG 7
G PGSG
Sbjct: 719 GVPGSG 724
>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus
Query: 3 QPGSGSMP 10
+P SG MP
Sbjct: 88 KPSSGHMP 95
>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 QPGSGSMP 10
+P SG MP
Sbjct: 88 KPSSGHMP 95
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 QPGSGSMP 10
+PG+GS P
Sbjct: 374 KPGAGSDP 381
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GQPGSGSMP 10
G+PG G P
Sbjct: 292 GKPGCGGAP 300
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GQPGSGSMP 10
G+PG G P
Sbjct: 292 GKPGCGGAP 300
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 GQPGSG 7
GQPG G
Sbjct: 1356 GQPGGG 1361
Query: 2 GQPGSG 7
G PGSG
Sbjct: 721 GVPGSG 726
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 GQPGSG 7
GQPG G
Sbjct: 1356 GQPGGG 1361
Query: 2 GQPGSG 7
G PGSG
Sbjct: 721 GVPGSG 726
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 GQPGSG 7
GQPG G
Sbjct: 1356 GQPGGG 1361
Query: 2 GQPGSG 7
G PGSG
Sbjct: 721 GVPGSG 726
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 MGQPGSG 7
+G PGSG
Sbjct: 725 IGTPGSG 731
Query: 1 MGQPGSG 7
+G+PG G
Sbjct: 1373 LGRPGEG 1379
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 MGQPGSG 7
+G PGSG
Sbjct: 725 IGTPGSG 731
Query: 1 MGQPGSG 7
+G+PG G
Sbjct: 1373 LGRPGEG 1379
>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate
Query: 2 GQPGSG 7
G PGSG
Sbjct: 166 GPPGSG 171
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 GQPGSG 7
G PGSG
Sbjct: 5253 GPPGSG 5258
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 GQPGSG 7
G PGSG
Sbjct: 5278 GPPGSG 5283
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 5 GSGSMP 10
GSGS+P
Sbjct: 88 GSGSLP 93
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 MGQPGSGSMP 10
+ QPG+G+ P
Sbjct: 67 VSQPGAGTRP 76
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 GQPGSG 7
G+PG G
Sbjct: 1185 GEPGQG 1190
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 5 GSGSMP 10
GSGS+P
Sbjct: 84 GSGSLP 89
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 5 GSGSMP 10
GSGS+P
Sbjct: 84 GSGSLP 89
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 MGQPGSGSMP 10
+ QPG+G+ P
Sbjct: 67 VSQPGAGARP 76
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 GQPGSG 7
G+PG G
Sbjct: 1193 GEPGQG 1198
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 GQPGSG 7
G+PG G
Sbjct: 1184 GEPGQG 1189
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 GQPGSG 7
G PGSG
Sbjct: 722 GVPGSG 727
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 GQPGSG 7
G PGSG
Sbjct: 1228 GTPGSG 1233
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 GQPGSG 7
G PGSG
Sbjct: 719 GVPGSG 724
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 GQPGSG 7
G PGSG
Sbjct: 719 GVPGSG 724
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 GQPGSG 7
G PGSG
Sbjct: 1229 GTPGSG 1234
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 GQPGSG 7
G PGSG
Sbjct: 723 GVPGSG 728
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 GQPGSGSM 9
G+PGSG +
Sbjct: 7 GRPGSGRV 14
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 5 GSGSMP 10
GSGS P
Sbjct: 455 GSGSFP 460
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 GQPGSG 7
G PGSG
Sbjct: 721 GVPGSG 726
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 GQPGSG 7
G PGSG
Sbjct: 721 GVPGSG 726
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 5 GSGSMP 10
GSGS P
Sbjct: 456 GSGSFP 461
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 GQPGSG 7
G PGSG
Sbjct: 720 GVPGSG 725
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 GQPGSG 7
G PGSG
Sbjct: 720 GVPGSG 725
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 GQPGSG 7
G PGSG
Sbjct: 721 GVPGSG 726
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 GQPGSG 7
G PGSG
Sbjct: 721 GVPGSG 726
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 GQPGSG 7
G PGSG
Sbjct: 721 GVPGSG 726
105|Sequence|521|530|SGSMPSRSTS
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 GSMPSRSTS 10
G MP+ STS
Sbjct: 144 GDMPTASTS 152
106|Sequence|526|535|SRSTSHTSDF
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 RSTSHTSD 9
R T+HT+D
Sbjct: 948 RGTAHTND 955
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 2 RSTSHTSDF 10
R SH SDF
Sbjct: 427 RLVSHGSDF 435
>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RSTSHTSDF 10
R SH SDF
Sbjct: 427 RLVSHGSDF 435
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 RSTSHTSDF 10
+STSH D
Sbjct: 98 KSTSHPQDL 106
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 2 RSTSHTSDF 10
RSTS S+F
Sbjct: 452 RSTSQISNF 460
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 SRSTSHTSDF 10
+R+T HT F
Sbjct: 381 ARNTDHTKSF 390
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 2 RSTSHTSDF 10
R+T TS+F
Sbjct: 65 RATPETSEF 73
>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SRSTSHTS 8
SRSTSH+
Sbjct: 525 SRSTSHSP 532
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 2 RSTSHTSDF 10
R+T TS+F
Sbjct: 65 RATPETSEF 73
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 2 RSTSHTSDF 10
R+T TS+F
Sbjct: 65 RATPETSEF 73
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 2 RSTSHTSDF 10
R+T TS+F
Sbjct: 65 RATPETSEF 73
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 SRSTSHTS 8
SRSTSH+
Sbjct: 526 SRSTSHSP 533
>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SRSTSHTS 8
SRSTSH+
Sbjct: 526 SRSTSHSP 533
>sp|ORF23_TTVV4|PROBABLE protein VP2|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 SRSTSHTSD 9
SRST TSD
Sbjct: 161 SRSTDGTSD 169
107|Sequence|531|540|HTSDFNPNSG
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 5 FNPNSG 10
FNPNSG
Sbjct: 452 FNPNSG 457
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 DFNPNS 9
DFNPN+
Sbjct: 1129 DFNPNT 1134
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 TSDFNPNSG 10
T+DFN N G
Sbjct: 773 TADFNRNDG 781
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 HTSDFNPNS 9
H+S NPN+
Sbjct: 815 HSSSANPNA 823
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 TSDFNPNSG 10
T+DFN N G
Sbjct: 773 TADFNRNDG 781
>sp|YVAD_VACCC|UNCHARACTERIZED 9.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TSDFNPNSG 10
TS ++PNSG
Sbjct: 46 TSSYDPNSG 54
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TSDFNPNSG 10
T F PNSG
Sbjct: 349 TISFKPNSG 357
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 FNPNSG 10
FNP+SG
Sbjct: 356 FNPSSG 361
>sp|MATRX_NIPAV|MATRIX protein|Nipah virus
Query: 3 SDFNPNS 9
SDF+P+S
Sbjct: 17 SDFSPSS 23
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TSDFNPNSG 10
T +F P+SG
Sbjct: 353 TIEFKPSSG 361
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 5 FNPNSG 10
FNPN+G
Sbjct: 452 FNPNNG 457
>sp|ST_POVJC|SMALL t antigen|JC polyomavirus (JCPyV) (JCV)
Query: 4 DFNPNS 9
DF PNS
Sbjct: 85 DFPPNS 90
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 SDFNPNS 9
SDF+P S
Sbjct: 17 SDFSPTS 23
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HTSDFNPNS 9
H SDF+ +S
Sbjct: 1736 HASDFDVDS 1744
>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 DFNPN 8
DFNPN
Sbjct: 33 DFNPN 37
>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 DFNPN 8
DFNPN
Sbjct: 33 DFNPN 37
>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 DFNPN 8
DFNPN
Sbjct: 33 DFNPN 37
>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 DFNPN 8
DFNPN
Sbjct: 33 DFNPN 37
>sp|VGLG_HMPVC|MAJOR surface glycoprotein G|Human metapneumovirus (strain CAN97-83)
Query: 4 DFNPNS 9
D NPNS
Sbjct: 86 DINPNS 91
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HTSDFNPNS 9
H SDF+ +S
Sbjct: 1744 HASDFDVDS 1752
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HTSDFNPNS 9
H SDF+ +S
Sbjct: 1744 HASDFDVDS 1752
>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 DFNPN 8
DFNPN
Sbjct: 33 DFNPN 37
>sp|HBSAG_HBVD1|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 DFNPN 8
DFNPN
Sbjct: 33 DFNPN 37
>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C
Query: 4 DFNPN 8
DFNPN
Sbjct: 44 DFNPN 48
>sp|HBSAG_HBVC7|LARGE envelope protein|Hepatitis B virus genotype C
Query: 4 DFNPN 8
DFNPN
Sbjct: 44 DFNPN 48
>sp|HBSAG_HBVC0|LARGE envelope protein|Hepatitis B virus genotype C
Query: 4 DFNPN 8
DFNPN
Sbjct: 44 DFNPN 48
>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 DFNPN 8
DFNPN
Sbjct: 33 DFNPN 37
>sp|HBSAG_HBVC4|LARGE envelope protein|Hepatitis B virus genotype C
Query: 4 DFNPN 8
DFNPN
Sbjct: 44 DFNPN 48
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 4 DFNPNSG 10
DF P SG
Sbjct: 307 DFKPQSG 313
>sp|HBSAG_HBVCJ|LARGE envelope protein|Hepatitis B virus genotype C
Query: 4 DFNPN 8
DFNPN
Sbjct: 44 DFNPN 48
>sp|HBSAG_HBVC8|LARGE envelope protein|Hepatitis B virus genotype C
Query: 4 DFNPN 8
DFNPN
Sbjct: 33 DFNPN 37
>sp|HBSAG_HBVC5|LARGE envelope protein|Hepatitis B virus genotype C
Query: 4 DFNPN 8
DFNPN
Sbjct: 44 DFNPN 48
>sp|HBSAG_HBVC3|LARGE envelope protein|Hepatitis B virus genotype C
Query: 4 DFNPN 8
DFNPN
Sbjct: 44 DFNPN 48
>sp|HBSAG_HBVC2|LARGE envelope protein|Hepatitis B virus genotype C
Query: 4 DFNPN 8
DFNPN
Sbjct: 44 DFNPN 48
>sp|HBSAG_HBVC1|LARGE envelope protein|Hepatitis B virus genotype C
Query: 4 DFNPN 8
DFNPN
Sbjct: 44 DFNPN 48
>sp|HBSAG_HBVA1|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 4 DFNPN 8
DFNPN
Sbjct: 44 DFNPN 48
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 TSDFNPN 8
TS+FN N
Sbjct: 857 TSNFNEN 863
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 TSDFNPN 8
T D++PN
Sbjct: 1617 TGDYSPN 1623
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 TSDFNPN 8
T D++PN
Sbjct: 1617 TGDYSPN 1623
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 1 HTSDFNPN 8
+T+DF P+
Sbjct: 492 YTTDFQPS 499
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 TSDFNPN 8
T D++PN
Sbjct: 1617 TGDYSPN 1623
>sp|RP19_VACCC|DNA-DIRECTED RNA polymerase 19 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TSDFNPNS 9
TSD +P S
Sbjct: 33 TSDIDPKS 40
>sp|RP19_VACCA|DNA-DIRECTED RNA polymerase 19 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 TSDFNPNS 9
TSD +P S
Sbjct: 33 TSDIDPKS 40
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 TSDFNPN 8
T D++PN
Sbjct: 1617 TGDYSPN 1623
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 TSDFNPN 8
T D++PN
Sbjct: 1617 TGDYSPN 1623
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 TSDFNPN 8
T D++PN
Sbjct: 1617 TGDYSPN 1623
>sp|RP19_MONPV|DNA-DIRECTED RNA polymerase 19 kDa|Monkeypox virus (MPXV)
Query: 2 TSDFNPNS 9
TSD +P S
Sbjct: 30 TSDIDPKS 37
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 SDFNPNS 9
SDF P S
Sbjct: 6283 SDFTPRS 6289
>sp|RP19_VAR67|DNA-DIRECTED RNA polymerase 19 kDa|Variola virus (isolate
Query: 2 TSDFNPNS 9
TSD +P S
Sbjct: 33 TSDIDPKS 40
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 TSDFNPN 8
TS+FN N
Sbjct: 857 TSNFNEN 863
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 1 HTSDFNPN 8
+T+DF P+
Sbjct: 490 YTADFQPS 497
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 TSDFNPNSG 10
T F PN+G
Sbjct: 294 TQSFAPNTG 302
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 TSDFNPNSG 10
T F PN+G
Sbjct: 294 TQSFAPNTG 302
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 6 NPNSG 10
NPNSG
Sbjct: 453 NPNSG 457
108|Sequence|536|545|NPNSGSDQRV
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PNSGSDQRV 10
PNSG D V
Sbjct: 354 PNSGGDMEV 362
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 NPNSGSDQRV 10
NP+SG D +
Sbjct: 357 NPSSGGDPEI 366
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 1 NPNSGSDQR 9
+P SG+D R
Sbjct: 367 DPGSGTDAR 375
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 5 GSDQRV 10
GSDQR+
Sbjct: 960 GSDQRI 965
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 GSDQRV 10
GSDQR+
Sbjct: 960 GSDQRI 965
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 GSDQRV 10
GSDQR+
Sbjct: 961 GSDQRI 966
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 5 GSDQRV 10
GSDQR+
Sbjct: 961 GSDQRI 966
>sp|DYR_HHV8P|PUTATIVE Dihydrofolate reductase|Human herpesvirus 8 type P
Query: 1 NPNSGSDQRV 10
NP G +RV
Sbjct: 160 NPKPGEQERV 169
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 1 NPNSGSDQR 9
N N+G+D R
Sbjct: 560 NTNAGTDSR 568
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 1 NPNSGSDQR 9
N N+G+D R
Sbjct: 567 NINAGTDSR 575
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 NPNSGS 6
NP SGS
Sbjct: 1134 NPKSGS 1139
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 NPNSGS 6
NP SGS
Sbjct: 1134 NPKSGS 1139
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NPNSGSDQRV 10
N ++GSD+R+
Sbjct: 199 NLDNGSDRRL 208
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NPNSGSDQRV 10
N ++GSD+R+
Sbjct: 199 NLDNGSDRRL 208
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 NPNSGSDQR 9
N N+G D R
Sbjct: 560 NTNAGKDSR 568
109|Sequence|541|550|SDQRVVNGGV
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 DQRVVN 7
DQR+VN
Sbjct: 234 DQRLVN 239
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 SDQRVVN 7
SD+R+VN
Sbjct: 373 SDRRMVN 379
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 SDQRVVN 7
SD+R+VN
Sbjct: 373 SDRRMVN 379
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 SDQRVVN 7
SD+R+VN
Sbjct: 373 SDRRMVN 379
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 SDQRVVN 7
SD+R+VN
Sbjct: 373 SDRRMVN 379
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 SDQRVVN 7
SD+R+VN
Sbjct: 373 SDRRMVN 379
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 SDQRVVN 7
SD+R+VN
Sbjct: 373 SDRRMVN 379
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 SDQRVVN 7
SD+R+VN
Sbjct: 373 SDRRMVN 379
>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 1 SDQRVVNG 8
SD++ VNG
Sbjct: 206 SDEQPVNG 213
110|Sequence|546|555|VNGGVPWPSP
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 5 VPWPSP 10
+PWP+P
Sbjct: 895 IPWPNP 900
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 GGVPWP 8
G VPWP
Sbjct: 615 GAVPWP 620
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 PWPSP 10
PWP P
Sbjct: 636 PWPEP 640
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 NGGVPWPSP 10
+GG P P P
Sbjct: 947 DGGFPLPPP 955
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 2 NGGVPWPSP 10
+GG P P P
Sbjct: 947 DGGFPLPPP 955
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 VNGGVPWPSP 10
VNGG+P +P
Sbjct: 2075 VNGGMPSGAP 2084
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 6 PWPSP 10
PWP P
Sbjct: 485 PWPLP 489
>sp|US30_HCMVA|UNCHARACTERIZED protein HHRF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VNGGVPW 7
VNGG+ W
Sbjct: 144 VNGGIRW 150
>sp|US30_HCMVM|UNCHARACTERIZED protein US30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VNGGVPW 7
VNGG+ W
Sbjct: 144 VNGGIRW 150
>sp|GQ2_HHV6U|GLYCOPROTEIN Q2|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 PWPSP 10
PWP P
Sbjct: 194 PWPEP 198
>sp|UL109_HCMVA|UNCHARACTERIZED protein UL109|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 PWPSP 10
PWP P
Sbjct: 61 PWPRP 65
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 4 GVPWP 8
VPWP
Sbjct: 616 AVPWP 620
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 GVPWPSP 10
G+P+P+P
Sbjct: 729 GLPYPTP 735
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 GGVPWPSP 10
GG+ W SP
Sbjct: 747 GGMSWISP 754
Query: 3 GGVPWPSP 10
GGV W +P
Sbjct: 1504 GGVFWDTP 1511
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 1 VNGGVPWPSP 10
+N GVP P P
Sbjct: 114 INSGVPDPLP 123
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 GGVPWPSP 10
GGV W +P
Sbjct: 1506 GGVLWDTP 1513
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 GGVPWPSP 10
GGV W +P
Sbjct: 1506 GGVLWDTP 1513
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 GGVPWPSP 10
GGV W +P
Sbjct: 1502 GGVLWDTP 1509
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 VPWPSP 10
+P+P+P
Sbjct: 319 IPYPNP 324
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 VPWPSP 10
+P+P+P
Sbjct: 319 IPYPNP 324
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 VPWPSP 10
+P+P+P
Sbjct: 319 IPYPNP 324
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GVPWP 8
G+PWP
Sbjct: 1107 GIPWP 1111
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 VNGGVP 6
VNGG+P
Sbjct: 2015 VNGGMP 2020
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 4 GVPWP 8
G+PWP
Sbjct: 1080 GIPWP 1084
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VNGGVPW 7
VNG PW
Sbjct: 621 VNGNSPW 627
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 1 VNGGVPW 7
VNG PW
Sbjct: 620 VNGNSPW 626
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 GGVPWPSP 10
GGV W +P
Sbjct: 1505 GGVFWDTP 1512
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 4 GVPWP 8
G+PWP
Sbjct: 1085 GIPWP 1089
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 GGVPWPSP 10
GGV W +P
Sbjct: 1505 GGVFWDTP 1512
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 GGVPWPSP 10
GGV W +P
Sbjct: 1505 GGVFWDTP 1512
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 NGGVPWPSP 10
GGV W +P
Sbjct: 1432 RGGVFWDTP 1440
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 GGVPWPSP 10
GGV W +P
Sbjct: 1505 GGVFWDTP 1512
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 VPWPSP 10
V WP+P
Sbjct: 686 VGWPAP 691
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 4 GVPWPSP 10
G P PSP
Sbjct: 273 GQPHPSP 279
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 4 GVPWPSP 10
G P PSP
Sbjct: 273 GQPHPSP 279
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 GGVPWPSP 10
GGV W +P
Sbjct: 1504 GGVFWDTP 1511
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VNGGVPWP 8
+NG +P P
Sbjct: 594 INGNIPVP 601
>sp|MC132_MCV1|PROTEIN MC132|Molluscum contagiosum virus subtype 1
Query: 6 PWPSP 10
PWP P
Sbjct: 170 PWPRP 174
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 2 NGGVPWP 8
NGG P P
Sbjct: 385 NGGKPTP 391
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 4 GVPWPS 9
GVPW S
Sbjct: 591 GVPWRS 596
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 4 GVPWPS 9
GVPW S
Sbjct: 591 GVPWRS 596
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 3 GGVPWPS 9
GVPW +
Sbjct: 1064 AGVPWTA 1070
>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 GVPWPSP 10
GVP P P
Sbjct: 156 GVPPPQP 162
>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 GVPWPSP 10
GVP P P
Sbjct: 156 GVPPPQP 162
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 GVPWPSP 10
GVP P P
Sbjct: 156 GVPPPQP 162
>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 GVPWPSP 10
GVP P P
Sbjct: 156 GVPPPQP 162
>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 GVPWPSP 10
GVP P P
Sbjct: 156 GVPPPQP 162
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 VPWPSP 10
+PWP+P
Sbjct: 419 LPWPTP 424
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 VPWPSP 10
+PWP+P
Sbjct: 419 LPWPTP 424
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 VPWPSP 10
+PWP+P
Sbjct: 419 LPWPTP 424
>sp|LHDAG_HDVS2|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 4 GVPWPSP 10
G PW SP
Sbjct: 193 GFPWVSP 199
111|Sequence|551|560|PWPSPCPSPS
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 3 PSPCPSP 9
P PCP P
Sbjct: 767 PKPCPEP 773
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 3 PSPCPSP 9
P PCP P
Sbjct: 768 PKPCPEP 774
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 3 PSPCPSP 9
P PCP P
Sbjct: 767 PKPCPEP 773
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 3 PSPCPSP 9
P PCP P
Sbjct: 768 PKPCPEP 774
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 5 PCPSP 9
PCP P
Sbjct: 461 PCPKP 465
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 5 PCPSP 9
PCP P
Sbjct: 579 PCPDP 583
>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 6 CPSPS 10
CPSPS
Sbjct: 60 CPSPS 64
>sp|U21_HHV6Z|U21 glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 2 WPSPCPS 8
+PS CP+
Sbjct: 19 YPSTCPA 25
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 WPSPCPSP 9
W +P P P
Sbjct: 1509 WDTPSPKP 1516
Query: 1 PWPSPC 6
P P PC
Sbjct: 1512 PSPKPC 1517
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 WPSPCPSP 9
W +P P P
Sbjct: 1509 WDTPSPKP 1516
Query: 1 PWPSPC 6
P P PC
Sbjct: 1512 PSPKPC 1517
>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 3 PSPCP 7
P PCP
Sbjct: 14 PVPCP 18
>sp|SPIKE_ADE15|FIBER protein|Human adenovirus D serotype 15
Query: 2 WPSPCPSPS 10
W +P PSP+
Sbjct: 183 WTTPDPSPN 191
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 WPSPCPSP 9
W +P P P
Sbjct: 1509 WDTPSPKP 1516
Query: 1 PWPSPC 6
P P PC
Sbjct: 1512 PSPKPC 1517
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 WPSPCPSP 9
W +P P P
Sbjct: 1509 WDTPSPKP 1516
Query: 1 PWPSPC 6
P P PC
Sbjct: 1512 PSPKPC 1517
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 2 WPSPCPSPS 10
W +P PSP+
Sbjct: 402 WTTPAPSPN 410
>sp|TOP1_VAR67|DNA topoisomerase 1|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 SPCPSP 9
SP PSP
Sbjct: 243 SPLPSP 248
>sp|TOP1_VACCC|DNA topoisomerase 1B|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 SPCPSP 9
SP PSP
Sbjct: 243 SPLPSP 248
>sp|TOP1_VACCA|DNA topoisomerase 1B|Vaccinia virus (strain Ankara) (VACV)
Query: 4 SPCPSP 9
SP PSP
Sbjct: 243 SPLPSP 248
>sp|TOP1_MONPV|DNA topoisomerase I|Monkeypox virus (MPXV)
Query: 4 SPCPSP 9
SP PSP
Sbjct: 243 SPLPSP 248
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 3 PSPCPSP 9
P P PSP
Sbjct: 50 PPPVPSP 56
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 3 PSPCPSP 9
P P PSP
Sbjct: 50 PPPVPSP 56
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 WPSPC 6
WPS C
Sbjct: 78 WPSQC 82
>sp|HBZ_HTL1L|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 3 PSPCP 7
P PCP
Sbjct: 14 PVPCP 18
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 3 PSPCPSPS 10
P+P P+PS
Sbjct: 320 PTPSPAPS 327
Query: 1 PWPSPCPS 8
P PSP PS
Sbjct: 320 PTPSPAPS 327
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 PWPSPCPS 8
PW SP S
Sbjct: 517 PWTSPASS 524
>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2
Query: 2 WPSPCPSPS 10
W +P PSP+
Sbjct: 402 WTTPDPSPN 410
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 5 PCPSP 9
PCP P
Sbjct: 457 PCPLP 461
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 WPSPC 6
WPS C
Sbjct: 78 WPSQC 82
>sp|VIE3_HCMVT|30 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 2 WPSPCPS 8
WPSP PS
Sbjct: 267 WPSPLPS 273
Query: 2 WPSPCP 7
W +PCP
Sbjct: 275 WSTPCP 280
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PWPSPCPSP 9
P PS PSP
Sbjct: 352 PRPSRTPSP 360
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PWPSPCPSP 9
P PS PSP
Sbjct: 352 PRPSRTPSP 360
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PWPSPCPSP 9
P PS PSP
Sbjct: 352 PRPSRTPSP 360
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 WPSPC 6
WPS C
Sbjct: 77 WPSQC 81
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 5 PCPSP 9
PCP P
Sbjct: 453 PCPLP 457
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 6 CPSPS 10
CP PS
Sbjct: 76 CPDPS 80
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 3 PSPCP 7
P PCP
Sbjct: 111 PRPCP 115
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 5 PCPSP 9
PCP P
Sbjct: 448 PCPLP 452
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 WPSPCPSPS 10
+P P P P+
Sbjct: 750 FPLPAPKPA 758
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 PSPCPSPS 10
PSP P+P+
Sbjct: 417 PSPTPNPT 424
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 PWPSPCP 7
PW CP
Sbjct: 464 PWGHSCP 470
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 PWPSPCP 7
PW CP
Sbjct: 464 PWGHSCP 470
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 PWPSPCP 7
PW CP
Sbjct: 464 PWGHSCP 470
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PSPCPSPS 10
PSP P P+
Sbjct: 214 PSPGPMPA 221
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 2 WPSPCP 7
W +PCP
Sbjct: 611 WQAPCP 616
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 PWPSPCPSPS 10
PWP P PS
Sbjct: 468 PWPGSAPLPS 477
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 1 PWPSPCPSPS 10
PWP P PS
Sbjct: 468 PWPGSAPLPS 477
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 PWPSPCP 7
PW CP
Sbjct: 464 PWGHSCP 470
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PSPCPSPS 10
P P P PS
Sbjct: 297 PGPDPGPS 304
Query: 1 PWPSPCPS 8
P P P PS
Sbjct: 297 PGPDPGPS 304
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 PWPSPCP 7
PW CP
Sbjct: 464 PWGHSCP 470
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 PWPSPCPS 8
PW SP +
Sbjct: 516 PWTSPAST 523
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PSPCPSPS 10
PSP P P+
Sbjct: 214 PSPGPMPA 221
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PSPCPSPS 10
P P P PS
Sbjct: 297 PGPDPGPS 304
Query: 1 PWPSPCPS 8
P P P PS
Sbjct: 297 PGPDPGPS 304
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 PWPSP 5
PW SP
Sbjct: 512 PWTSP 516
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 WPSPCPSPS 10
+P+P SPS
Sbjct: 2004 YPAPVYSPS 2012
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 WPSPCPSPS 10
+P+P SPS
Sbjct: 2004 YPAPVYSPS 2012
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 SPCPSPS 10
+PCPSP+
Sbjct: 2077 TPCPSPN 2083
>sp|PG130_VARV|39KDA core protein OPG130|Variola virus
Query: 1 PWPSPCPSP 9
P P+P P P
Sbjct: 84 PTPAPTPKP 92
>sp|PG130_VAR67|39KDA core protein OPG130|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 PWPSPCPSP 9
P P+P P P
Sbjct: 84 PTPAPTPKP 92
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 WPSPCPSPS 10
+P+P SPS
Sbjct: 2005 YPAPIYSPS 2013
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 3 PSPCPSPS 10
P+P P+PS
Sbjct: 451 PTPSPAPS 458
Query: 1 PWPSPCPS 8
P PSP PS
Sbjct: 451 PTPSPAPS 458
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 4 SPCPSPS 10
PCPSP+
Sbjct: 174 EPCPSPA 180
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 3 PSPCPSPS 10
P+P P+PS
Sbjct: 450 PTPSPAPS 457
112|Sequence|556|565|CPSPSSRPPS
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 2 PSPSSRP 8
PSP +RP
Sbjct: 224 PSPGTRP 230
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 2 PSPSSRP 8
PSP +RP
Sbjct: 224 PSPGARP 230
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 2 PSPSSRP 8
PSP +RP
Sbjct: 224 PSPGARP 230
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 PSPSSRP 8
PSP +RP
Sbjct: 224 PSPGARP 230
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PSPSSRPP 9
PSP PP
Sbjct: 234 PSPPKLPP 241
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PSPSSRPP 9
PSP PP
Sbjct: 234 PSPPKLPP 241
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 2 PSPSSRPPS 10
P PS PPS
Sbjct: 468 PGPSVDPPS 476
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 4 PSSRPP 9
P+SRPP
Sbjct: 46 PASRPP 51
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 4 PSSRPP 9
P+SRPP
Sbjct: 46 PASRPP 51
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 PSPSSRPPS 10
P PS++PPS
Sbjct: 116 PGPSAQPPS 124
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 PSPSSRPPS 10
P PS++PPS
Sbjct: 116 PGPSAQPPS 124
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 PSPSSRPPS 10
P PS++PPS
Sbjct: 116 PGPSAQPPS 124
>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 PSPSSRPPS 10
P PS++PPS
Sbjct: 116 PGPSAQPPS 124
>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 PSPSSRPPS 10
P PS++PPS
Sbjct: 116 PGPSAQPPS 124
>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 PSPSSRPPS 10
P PS++PPS
Sbjct: 116 PGPSAQPPS 124
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 3 SPSSRPP 9
+PSS PP
Sbjct: 245 APSSPPP 251
>sp|NSS_TOSV|NON-STRUCTURAL protein NS-S|Toscana virus (Tos)
Query: 2 PSPSSRPP 9
PSP PP
Sbjct: 308 PSPPHYPP 315
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 SPSSRPP 9
SP++RPP
Sbjct: 422 SPTTRPP 428
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 SPSSRPP 9
SP+SR P
Sbjct: 456 SPTSREP 462
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 SPSSRPP 9
SP+SR P
Sbjct: 456 SPTSREP 462
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PSPSSRPP 9
PSP PP
Sbjct: 625 PSPWQEPP 632
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 4 PSSRPPS 10
P+SRPP+
Sbjct: 131 PTSRPPA 137
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 4 PSSRPP 9
PSS PP
Sbjct: 579 PSSLPP 584
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 2 PSPSSRPP 9
P+P S PP
Sbjct: 180 PNPGSCPP 187
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PSSRP 8
PSSRP
Sbjct: 463 PSSRP 467
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 PSPSSRPPS 10
PSP+S PP
Sbjct: 19 PSPASAPPD 27
113|Sequence|561|570|SRPPSRYQSG
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 4 PSRYQSG 10
PSRYQ+G
Sbjct: 945 PSRYQAG 951
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 PPSRYQS 9
PP RYQ+
Sbjct: 1110 PPLRYQT 1116
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 PPSRYQ 8
PP+RY+
Sbjct: 34 PPTRYK 39
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 PPSRYQS 9
PP RYQ+
Sbjct: 1110 PPLRYQT 1116
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 4 PSRYQSG 10
PSR+Q+G
Sbjct: 946 PSRFQAG 952
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 PPSRYQS 9
PP R+QS
Sbjct: 510 PPVRFQS 516
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 PPSRYQS 9
PP R+QS
Sbjct: 510 PPVRFQS 516
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 PPSRYQS 9
PP R+QS
Sbjct: 510 PPVRFQS 516
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 PPSRYQS 9
PP R+QS
Sbjct: 510 PPVRFQS 516
Query: 4 PSRYQS 9
PSRY S
Sbjct: 1853 PSRYSS 1858
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 PPSRYQS 9
PP R+QS
Sbjct: 510 PPVRFQS 516
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 SRPPSRYQSG 10
SRP R QSG
Sbjct: 219 SRPWVRGQSG 228
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 SRPPSRYQSG 10
SRP R QSG
Sbjct: 219 SRPWVRGQSG 228
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 RPPSRYQSG 10
RP +YQ G
Sbjct: 1503 RPSGKYQMG 1511
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 RPPSRYQSG 10
RP +YQ G
Sbjct: 1503 RPSGKYQMG 1511
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 RPPSRYQSG 10
RP +YQ G
Sbjct: 1503 RPSGKYQMG 1511
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 4 PSRYQS 9
P+RYQS
Sbjct: 969 PARYQS 974
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 4 PSRYQS 9
P+RYQS
Sbjct: 971 PARYQS 976
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 4 PSRYQS 9
P+RYQS
Sbjct: 971 PARYQS 976
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 4 PSRYQS 9
P+RYQS
Sbjct: 969 PARYQS 974
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 4 PSRYQS 9
P+RYQS
Sbjct: 969 PARYQS 974
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 PSRYQS 9
P+RYQS
Sbjct: 953 PARYQS 958
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 4 PSRYQS 9
P+RYQS
Sbjct: 968 PARYQS 973
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 PSRYQS 9
P+RYQS
Sbjct: 953 PARYQS 958
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 4 PSRYQS 9
P+RYQS
Sbjct: 968 PARYQS 973
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 4 PSRYQS 9
P+RYQS
Sbjct: 953 PARYQS 958
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 PSRYQS 9
P+RYQS
Sbjct: 953 PARYQS 958
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 PSRYQS 9
P+RYQS
Sbjct: 953 PARYQS 958
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 4 PSRYQS 9
P RYQS
Sbjct: 941 PKRYQS 946
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 4 PSRYQS 9
P RYQS
Sbjct: 941 PKRYQS 946
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 6 RYQSG 10
RYQSG
Sbjct: 1530 RYQSG 1534
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 2 RPPSRYQS 9
RPP+ +QS
Sbjct: 207 RPPALFQS 214
>sp|Y115_ADE07|UNCHARACTERIZED 11.5 kDa early protein|Human adenovirus B serotype 7
Query: 1 SRPPSRYQ 8
SRPP R Q
Sbjct: 71 SRPPFREQ 78
114|Sequence|566|575|RYQSGPNSLP
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 RYQSGPNSL 9
RY+S P L
Sbjct: 818 RYRSAPKRL 826
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 RYQSGPNSL 9
RY+S P L
Sbjct: 890 RYRSAPKRL 898
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 RYQSGPNSL 9
RY+S P L
Sbjct: 890 RYRSAPKRL 898
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 RYQSGPNSL 9
RY+S P L
Sbjct: 890 RYRSAPKRL 898
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 RYQSGPNSL 9
RY+S P L
Sbjct: 890 RYRSAPKRL 898
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 2 YQSGPN 7
YQSGP+
Sbjct: 189 YQSGPD 194
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 RYQSGPNSL 9
RY+S P L
Sbjct: 890 RYRSAPKRL 898
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 2 YQSGPN 7
YQSGP+
Sbjct: 181 YQSGPD 186
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 2 YQSGPN 7
YQSGP+
Sbjct: 181 YQSGPD 186
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 RYQSGPNSL 9
RY+S P L
Sbjct: 890 RYRSAPKRL 898
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 RYQSGPNSL 9
RY+S P L
Sbjct: 890 RYRSAPKRL 898
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 RYQSGPNSL 9
RY+S P L
Sbjct: 890 RYRSAPKRL 898
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RYQSGPNSLP 10
R+Q GP+S+P
Sbjct: 610 RFQ-GPDSMP 618
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RYQSGPNSLP 10
R+Q GP+S+P
Sbjct: 611 RFQ-GPDSMP 619
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 4 SGPNSLP 10
SGP+S P
Sbjct: 152 SGPSSFP 158
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 RYQSGPNSLP 10
RY + P LP
Sbjct: 2787 RYSAPPGDLP 2796
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RYQSGPNSLP 10
RY + P LP
Sbjct: 2764 RYSAPPGDLP 2773
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 RYQSGPNSLP 10
RY + P LP
Sbjct: 2787 RYSAPPGDLP 2796
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 1 RYQSGPN 7
RY++GP+
Sbjct: 429 RYEAGPS 435
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 4 SGPNSLP 10
SGP S P
Sbjct: 152 SGPTSFP 158
115|Sequence|571|580|PNSLPPRAAT
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 NSLPPR 7
NS+PPR
Sbjct: 212 NSMPPR 217
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 NSLPPRAA 9
N+LPPRA+
Sbjct: 1362 NTLPPRAS 1369
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PNSLPP 6
PN LPP
Sbjct: 202 PNLLPP 207
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 PNSLPP 6
PN LPP
Sbjct: 1679 PNCLPP 1684
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PNSLPPRAAT 10
PN LPP A T
Sbjct: 721 PNLLPPVAYT 730
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PNSLPPRAAT 10
PN LPP A T
Sbjct: 721 PNLLPPVAYT 730
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PNSLPPRAAT 10
PN LPP A T
Sbjct: 721 PNLLPPVAYT 730
>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)
Query: 1 PNSLPP 6
PN LPP
Sbjct: 202 PNLLPP 207
>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant
Query: 1 PNSLPP 6
PN LPP
Sbjct: 202 PNLLPP 207
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 5 PPRAAT 10
PP AAT
Sbjct: 521 PPHAAT 526
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 2 NSLPPRAA 9
NSL P+AA
Sbjct: 21 NSLAPKAA 28
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 1 PNSLPP 6
P+SLPP
Sbjct: 579 PSSLPP 584
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 5 PPRAAT 10
PP AAT
Sbjct: 521 PPHAAT 526
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 5 PPRAAT 10
PP AAT
Sbjct: 521 PPHAAT 526
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 5 PPRAAT 10
PP AAT
Sbjct: 521 PPHAAT 526
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 5 PPRAAT 10
PP AAT
Sbjct: 521 PPHAAT 526
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 PPRAAT 10
PP AAT
Sbjct: 521 PPHAAT 526
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 PPRAAT 10
PP AAT
Sbjct: 521 PPHAAT 526
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 5 PPRAAT 10
PP AAT
Sbjct: 521 PPHAAT 526
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 5 PPRAAT 10
PP AAT
Sbjct: 521 PPHAAT 526
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 5 PPRAAT 10
PP AAT
Sbjct: 521 PPHAAT 526
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 SLPPRAAT 10
S+P RAAT
Sbjct: 726 SIPSRAAT 733
>sp|NEC2_HHV11|NUCLEAR egress protein 2|Human herpesvirus 1 (strain 17)
Query: 1 PNSLPPRAA 9
P+SLP R A
Sbjct: 43 PSSLPSRCA 51
116|Sequence|576|585|PRAATPTRPP
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PRAATPTRPP 10
PR ATP+ PP
Sbjct: 468 PRGATPSAPP 477
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PRAATPTRPP 10
PR ATP+ PP
Sbjct: 468 PRGATPSAPP 477
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 1 PRAATPTRPP 10
P+ TP+ PP
Sbjct: 17 PKPGTPSAPP 26
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 PRAATPTRPP 10
PR AT T PP
Sbjct: 29 PRGATQTAPP 38
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 PRAATPTRPP 10
PR AT T PP
Sbjct: 29 PRGATQTAPP 38
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 ATPTRPP 10
+TP PP
Sbjct: 1965 STPVEPP 1971
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 ATPTRPP 10
+TP PP
Sbjct: 1965 STPVEPP 1971
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRAATPTRPP 10
P + PT PP
Sbjct: 119 PNTSRPTAPP 128
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 PRAATPTRPP 10
P+A P RPP
Sbjct: 317 PQAGHPNRPP 326
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 5 TPTRPP 10
TPT PP
Sbjct: 253 TPTTPP 258
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PRAATPTRPP 10
PR P RPP
Sbjct: 26 PRQVAPFRPP 35
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 PRAATPTRPP 10
P A+TP +PP
Sbjct: 1381 PEASTPPKPP 1390
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 1 PRAATPTRP 9
PR +TP +P
Sbjct: 236 PRESTPVKP 244
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 PRAATPTRPP 10
PR P RPP
Sbjct: 26 PRQVAPFRPP 35
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PRAATPTRPP 10
P+ TPT PP
Sbjct: 449 PQGLTPTAPP 458
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRAATPTRPP 10
P + PT PP
Sbjct: 119 PSTSRPTAPP 128
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PRAATPTRPP 10
PRA TP PP
Sbjct: 698 PRAPTPMSPP 707
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PRAATPTRPP 10
PRA TP PP
Sbjct: 698 PRAPTPMSPP 707
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PRAATPTRPP 10
P+ TPT PP
Sbjct: 451 PQGLTPTAPP 460
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PRAATPTRPP 10
P+ TPT PP
Sbjct: 451 PQGLTPTAPP 460
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRAATPTRPP 10
P + PT PP
Sbjct: 119 PSTSRPTAPP 128
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PRAATPTRPP 10
P+ TPT PP
Sbjct: 451 PQGLTPTAPP 460
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRAATPTRPP 10
P + PT PP
Sbjct: 119 PNTSRPTAPP 128
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRAATPTRPP 10
P + PT PP
Sbjct: 116 PATSRPTAPP 125
>sp|LRP1_HHV1F|LATENCY-RELATED protein 1|Human herpesvirus 1 (strain F)
Query: 1 PRAATPTRP 9
PRA TPT P
Sbjct: 56 PRAPTPTHP 64
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRAATPTRPP 10
P + PT PP
Sbjct: 119 PNISRPTAPP 128
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRAATPTRPP 10
P + PT PP
Sbjct: 119 PDTSRPTAPP 128
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 PRAATPTRP 9
P TPT P
Sbjct: 58 PSTVTPTTP 66
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRAATPTRPP 10
P + PT PP
Sbjct: 119 PNISRPTAPP 128
117|Sequence|581|590|PTRPPSRPPS
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 RPPSRPPS 10
RPPS PS
Sbjct: 130 RPPSNRPS 137
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PTRPPSRP 8
P PP RP
Sbjct: 726 PRGPPDRP 733
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PTRPPSRP 8
P+RP SRP
Sbjct: 460 PSRPSSRP 467
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PTRPPSRP 8
P R P RP
Sbjct: 728 PARGPDRP 735
>sp|UL116_HCMVM|UNCHARACTERIZED protein UL116|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TRPPSRPPS 10
TR P+RPP+
Sbjct: 153 TRAPTRPPA 161
Query: 1 PTRPPSR 7
PTRPP++
Sbjct: 156 PTRPPAQ 162
>sp|UL116_HCMVA|UNCHARACTERIZED protein UL116|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TRPPSRPPS 10
TR P+RPP+
Sbjct: 155 TRAPTRPPA 163
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRTPGGPP 275
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 PTRPPSRPP 9
P R P+ PP
Sbjct: 267 PIRLPNGPP 275
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 1 PTRPPSRPP 9
P R P+ PP
Sbjct: 267 PLRLPNGPP 275
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 PTRPPSRPP 9
P R P+ PP
Sbjct: 267 PLRLPNGPP 275
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 1 PTRPPSRPP 9
P R P+ PP
Sbjct: 267 PLRLPNGPP 275
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 1 PTRPPSRPP 9
P R P+ PP
Sbjct: 267 PLRLPNGPP 275
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 1 PTRPPSRPP 9
P R P+ PP
Sbjct: 267 PLRLPNGPP 275
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PTRPPSRPPS 10
P+R PSR S
Sbjct: 1842 PSRAPSRSAS 1851
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PIRLPDGPP 275
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 4 PPSRPP 9
PP+ PP
Sbjct: 66 PPTAPP 71
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|TEG3_HHV2H|TEGUMENT protein UL14|Human herpesvirus 2 (strain HG52)
Query: 1 PTRPPSRP 8
P+RP SRP
Sbjct: 164 PSRPGSRP 171
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPGGPP 275
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPEGPP 275
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 244 PLRLPDGPP 252
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 260 PLRLPDGPP 268
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 263 PLRLPDGPP 271
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 260 PLRLPDGPP 268
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PTRPPSRPPS 10
P+R PSR S
Sbjct: 1834 PSRAPSRSVS 1843
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 1 PTRPPSRPP 9
P R PS PP
Sbjct: 20 PERAPSLPP 28
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 2 TRPPSRPPS 10
T PSRPPS
Sbjct: 52 TIHPSRPPS 60
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 PTRPPSRPP 9
P R P PP
Sbjct: 267 PLRLPDGPP 275
118|Sequence|586|595|SRPPSRPSRP
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPSRPSR 9
PP RPSR
Sbjct: 15 PPPRPSR 21
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPSRPSR 9
PP RPSR
Sbjct: 15 PPPRPSR 21
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SRPPSRPSR 9
SRP SRP+R
Sbjct: 461 SRPSSRPAR 469
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SRPPSRPSR 9
S P RPSR
Sbjct: 348 SEPRPRPSR 356
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SRPPSRPSR 9
S P RPSR
Sbjct: 348 SEPRPRPSR 356
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SRPPSRPSR 9
S P RPSR
Sbjct: 348 SEPRPRPSR 356
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RPPSRPSR 9
R P RP R
Sbjct: 725 REPDRPER 732
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SRPPSRP 7
S+P SRP
Sbjct: 341 SKPESRP 347
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SRPPSRP 7
S+P SRP
Sbjct: 341 SKPESRP 347
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 1 SRPPSRP 7
S+P SRP
Sbjct: 341 SKPESRP 347
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 1 SRPPSRP 7
S+P SRP
Sbjct: 341 SKPESRP 347
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 1 SRPPSRPSRP 10
+RP RPSRP
Sbjct: 66 ARPAVRPSRP 75
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 1 SRPPSRPSRP 10
+RP RPSRP
Sbjct: 66 ARPAVRPSRP 75
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 SRPPSRP 7
S+P SRP
Sbjct: 341 SKPESRP 347
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 PPSRPSRP 10
PPS+ SRP
Sbjct: 1777 PPSQDSRP 1784
>sp|ICP34_HHV1F|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain F)
Query: 1 SRPPSRPSR 9
S PPSRP R
Sbjct: 119 SHPPSRPFR 127
>sp|ICP34_HHV11|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain 17)
Query: 1 SRPPSRPSR 9
S PPSRP R
Sbjct: 119 SHPPSRPFR 127
>sp|ICP34_HHV1D|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain CVG-2)
Query: 1 SRPPSRPSR 9
S PPSRP R
Sbjct: 120 SHPPSRPFR 128
>sp|ICP34_HHV1N|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain MGH-10)
Query: 1 SRPPSRPSR 9
S PPSRP R
Sbjct: 113 SHPPSRPFR 121
>sp|Y126_ADE07|UNCHARACTERIZED 12.6 kDa early protein|Human adenovirus B serotype 7
Query: 2 RPPSRPSRP 10
R PSRP RP
Sbjct: 34 RVPSRPCRP 42
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SRPPSRPSRP 10
+R +RPSRP
Sbjct: 31 TRGRTRPSRP 40
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SRPPSRPSRP 10
+R +RPSRP
Sbjct: 31 TRGRTRPSRP 40
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 1 SRPPSRPS 8
SRP +PS
Sbjct: 326 SRPGDKPS 333
119|Sequence|591|600|RPSRPPSHPS
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RPSRPPS 7
RPSR PS
Sbjct: 353 RPSRTPS 359
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RPSRPPS 7
RPSR PS
Sbjct: 353 RPSRTPS 359
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RPSRPPS 7
RPSR PS
Sbjct: 353 RPSRTPS 359
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PPSHP 9
PPSHP
Sbjct: 44 PPSHP 48
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PPSHP 9
PPSHP
Sbjct: 44 PPSHP 48
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PPSHP 9
PPSHP
Sbjct: 44 PPSHP 48
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PSRPPSHPS 10
PSRP S P+
Sbjct: 460 PSRPSSRPA 468
Query: 1 RPSRPPS 7
RP+ PPS
Sbjct: 123 RPAAPPS 129
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 PSRPPSHPS 10
P PPS+P+
Sbjct: 549 PKFPPSYPN 557
>sp|NS1_I02A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 1 RPSRPPSH 8
RPS PP
Sbjct: 211 RPSLPPKQ 218
>sp|NS1_I61A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 RPSRPPSH 8
RPS PP
Sbjct: 211 RPSLPPEQ 218
>sp|NS1_I02A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 RPSRPPSH 8
RPS PP
Sbjct: 211 RPSLPPKQ 218
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NS1_I30A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 RPSRPPSH 8
RPS PP
Sbjct: 211 RPSLPPKQ 218
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NS1_I67A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 RPSRPPSH 8
RPS PP
Sbjct: 211 RPSLPPEQ 218
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 1 RPSRPPSH 8
+P R PSH
Sbjct: 395 QPVRLPSH 402
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NS1_I02A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 RPSRPPSH 8
RPS PP
Sbjct: 211 RPSLPPKQ 218
>sp|NS1_I02A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Guinea
Query: 1 RPSRPPSH 8
RPS PP
Sbjct: 211 RPSLPPKQ 218
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RPSRPPS 7
RP+ PPS
Sbjct: 123 RPTAPPS 129
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 5 PPSHPS 10
PPSHPS
Sbjct: 378 PPSHPS 383
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 1 RPSRPPSHPS 10
RP P+H S
Sbjct: 317 RPKENPAHKS 326
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RPSRPPS 7
RP+ PPS
Sbjct: 120 RPTAPPS 126
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RPSRPPS 7
RP+ PPS
Sbjct: 123 RPTAPPS 129
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RPSRPPS 7
RP+ PPS
Sbjct: 123 RPTAPPS 129
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RPSRPPS 7
RP+ PPS
Sbjct: 123 RPTAPPS 129
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RPSRPPS 7
RP+ PPS
Sbjct: 123 RPTAPPS 129
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RPSRPPSHP 9
RPSRP + P
Sbjct: 36 RPSRPATVP 44
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RPSRPPSHP 9
RPSRP + P
Sbjct: 36 RPSRPATVP 44
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RPSRPPS 7
RP+ PPS
Sbjct: 123 RPTAPPS 129
>sp|NS1_I77A9|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/New
Query: 1 RPSRPPSH 8
RPS PP
Sbjct: 211 RPSFPPKQ 218
>sp|NS1_I73A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 RPSRPPSH 8
RPS PP
Sbjct: 211 RPSFPPKQ 218
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 1 RPSRPPSHPS 10
RP+ P+H S
Sbjct: 317 RPNENPAHKS 326
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 1 RPSRPPSHPS 10
R S PP +PS
Sbjct: 648 RISSPPDNPS 657
>sp|UL24_HHV2H|PROTEIN UL24|Human herpesvirus 2 (strain HG52)
Query: 1 RPSRPPS 7
RP RPPS
Sbjct: 218 RPQRPPS 224
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RPSRPPS 7
RP+ PPS
Sbjct: 123 RPTAPPS 129
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 RPSRPPSHPS 10
RP P+H S
Sbjct: 317 RPKENPAHKS 326
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 1 RPSRPPSHPS 10
RP+ P H S
Sbjct: 317 RPNENPVHKS 326
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RPSRPPSHP 9
+PS PPS P
Sbjct: 2788 KPSYPPSAP 2796
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 RPSRPPSHP 9
+PS PPS P
Sbjct: 2766 KPSYPPSAP 2774
>sp|TEG3_HHV2H|TEGUMENT protein UL14|Human herpesvirus 2 (strain HG52)
Query: 2 PSRPPSHPS 10
PSRP S P+
Sbjct: 164 PSRPGSRPT 172
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 RPSRPPSH 8
RP PSH
Sbjct: 1117 RPRETPSH 1124
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 RPSRPPSH 8
RP PSH
Sbjct: 1117 RPRETPSH 1124
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 2 PSRPPS 7
PSRPPS
Sbjct: 55 PSRPPS 60
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 RPSRPPSHP 9
+PS PPS P
Sbjct: 2761 KPSYPPSAP 2769
120|Sequence|596|605|PSHPSAHGSP
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 5 SAHGSP 10
SAHGSP
Sbjct: 971 SAHGSP 976
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 5 SAHGSP 10
SAHGSP
Sbjct: 971 SAHGSP 976
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 5 SAHGSP 10
SAHGSP
Sbjct: 971 SAHGSP 976
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 5 SAHGSP 10
SAHGSP
Sbjct: 971 SAHGSP 976
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 SAHGSP 10
SAHGSP
Sbjct: 971 SAHGSP 976
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 5 SAHGSP 10
SAHGSP
Sbjct: 971 SAHGSP 976
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 5 SAHGSP 10
SAHGSP
Sbjct: 971 SAHGSP 976
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 SAHGSP 10
SAHGSP
Sbjct: 971 SAHGSP 976
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 5 SAHGSP 10
SAHGSP
Sbjct: 971 SAHGSP 976
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 SHPSAHGS 9
S P++HGS
Sbjct: 432 SEPTSHGS 439
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 5 SAHGSP 10
SAHGSP
Sbjct: 971 SAHGSP 976
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 SHPSAH 7
SHP AH
Sbjct: 1660 SHPEAH 1665
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 PSHPSAH 7
PSH S H
Sbjct: 421 PSHASKH 427
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 PSHPSAHGSP 10
PS SA GSP
Sbjct: 13 PSELSAWGSP 22
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 5 SAHGSP 10
SAHG P
Sbjct: 963 SAHGDP 968
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PSHPSA 6
P+HPSA
Sbjct: 457 PAHPSA 462
>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)
Query: 3 HPSAHG 8
HP+AH
Sbjct: 357 HPTAHA 362
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PSHPSAH 7
P HP+A+
Sbjct: 312 PDHPTAN 318
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PSHPSAH 7
P HP+A+
Sbjct: 312 PDHPTAN 318
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 1 PSHPSAHGSP 10
PS PS G+P
Sbjct: 259 PSEPSGPGAP 268
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 PSHPSAHG 8
P H ++HG
Sbjct: 1087 PIHVTSHG 1094
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 PSHPSAHG 8
P H ++HG
Sbjct: 1087 PIHVTSHG 1094
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 1 PSHPSAHGSP 10
PS PS G+P
Sbjct: 259 PSEPSGPGAP 268
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 PSHPSAHGSP 10
PS PS G+P
Sbjct: 259 PSEPSGPGAP 268
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 1 PSHPSAHGSP 10
PS PS G+P
Sbjct: 259 PSEPSGPGAP 268
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 PSHPSAHGSP 10
PS PS G+P
Sbjct: 259 PSEPSGPGAP 268
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 1 PSHPSAHGSP 10
PS PS G+P
Sbjct: 259 PSEPSGPGAP 268
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 1 PSHPSAHGSP 10
PS PS G+P
Sbjct: 259 PSEPSGPGAP 268
121|Sequence|601|610|AHGSPAPVST
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 HGSPAPVST 10
+G+PAP++T
Sbjct: 218 NGTPAPLNT 226
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 3 GSPAPVST 10
GSPAP+ T
Sbjct: 532 GSPAPMET 539
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 2 HGSPAP 7
HGSP P
Sbjct: 335 HGSPPP 340
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 2 HGSPAP 7
HGSP P
Sbjct: 335 HGSPPP 340
>sp|PHOSP_PI2HT|PHOSPHOPROTEIN parainfluenza 2 virus (strain
Query: 1 AHGSPAPVS 9
AH PAP S
Sbjct: 210 AHADPAPAS 218
>sp|PHOSP_PI2H|PHOSPHOPROTEIN parainfluenza 2 virus (HPIV-2)
Query: 1 AHGSPAPVS 9
AH PAP S
Sbjct: 210 AHADPAPAS 218
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 4 SPAPVST 10
SPAP+S+
Sbjct: 196 SPAPISS 202
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 3 GSPAPVS 9
+PAPVS
Sbjct: 1648 ANPAPVS 1654
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 3 GSPAPVS 9
+PAPVS
Sbjct: 1648 ANPAPVS 1654
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PAPVST 10
PAP+ST
Sbjct: 146 PAPIST 151
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PAPVST 10
PAP+ST
Sbjct: 146 PAPIST 151
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PAPVST 10
PAP+ST
Sbjct: 146 PAPIST 151
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 AHGSP 5
AHGSP
Sbjct: 972 AHGSP 976
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 AHGSP 5
AHGSP
Sbjct: 972 AHGSP 976
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 AHGSP 5
AHGSP
Sbjct: 972 AHGSP 976
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 3 GSPAPVS 9
+PAPVS
Sbjct: 1648 ANPAPVS 1654
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 3 GSPAPVS 9
+PAPVS
Sbjct: 1648 ANPAPVS 1654
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 AHGSP 5
AHGSP
Sbjct: 972 AHGSP 976
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 AHGSP 5
AHGSP
Sbjct: 972 AHGSP 976
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 3 GSPAPVS 9
+PAPVS
Sbjct: 1648 ANPAPVS 1654
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 AHGSP 5
AHGSP
Sbjct: 972 AHGSP 976
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 3 GSPAPVS 9
+PAPVS
Sbjct: 1648 ANPAPVS 1654
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 3 GSPAPVS 9
+PAPVS
Sbjct: 1648 ANPAPVS 1654
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 4 SPAPVS 9
+PAPVS
Sbjct: 1649 NPAPVS 1654
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 AHGSP 5
AHGSP
Sbjct: 972 AHGSP 976
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 AHGSP 5
AHGSP
Sbjct: 972 AHGSP 976
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 AHGSP 5
AHGSP
Sbjct: 972 AHGSP 976
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 3 GSPAPVS 9
+PAPVS
Sbjct: 1648 ANPAPVS 1654
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 AHGSP 5
AHGSP
Sbjct: 972 AHGSP 976
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 4 SPAPVS 9
+PAPVS
Sbjct: 1650 NPAPVS 1655
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 1 AHGSPAPVS 9
A+ PAPV+
Sbjct: 21 AYTGPAPVA 29
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 AHGSPAPVST 10
++G P PV T
Sbjct: 702 SYGFPTPVFT 711
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 GSPAPVST 10
GSP PV +
Sbjct: 450 GSPVPVGS 457
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 1 AHGSPAPV 8
A G+PAPV
Sbjct: 411 ASGAPAPV 418
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 5 PAPVST 10
PAPVST
Sbjct: 482 PAPVST 487
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 5 PAPVST 10
PAPVST
Sbjct: 487 PAPVST 492
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 GSPAPVST 10
G+P+P+++
Sbjct: 1949 GNPSPITS 1956
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 GSPAPVST 10
G+P+P+++
Sbjct: 1949 GNPSPITS 1956
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 GSPAPVST 10
G+P+P+++
Sbjct: 1949 GNPSPITS 1956
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 GSPAPVST 10
G+P+P+++
Sbjct: 1949 GNPSPITS 1956
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 3 GSPAPVST 10
GSP PV +
Sbjct: 449 GSPIPVGS 456
122|Sequence|606|615|APVSTMPKRM
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 PVSTMPKRM 10
P+ST PK++
Sbjct: 1937 PMSTNPKKV 1945
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 PVSTMPKRM 10
P+ST PK++
Sbjct: 1937 PMSTNPKKV 1945
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 PVSTMPKRM 10
P+ST PK++
Sbjct: 1937 PMSTDPKKV 1945
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 APVSTMP 7
APV T+P
Sbjct: 606 APVPTIP 612
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 APVSTMP 7
APV T+P
Sbjct: 593 APVPTIP 599
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 APVSTMP 7
APV T+P
Sbjct: 593 APVPTIP 599
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 1 APVSTMP 7
APV T+P
Sbjct: 593 APVPTIP 599
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 1 APVSTMP 7
APV T+P
Sbjct: 593 APVPTIP 599
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 1 APVSTMP 7
APV T+P
Sbjct: 593 APVPTIP 599
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 1 APVSTMP 7
APV T+P
Sbjct: 599 APVPTIP 605
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 1 APVSTMP 7
APV T+P
Sbjct: 593 APVPTIP 599
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 1 APVSTMP 7
APV T+P
Sbjct: 599 APVPTIP 605
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 1 APVSTMP 7
APV T+P
Sbjct: 593 APVPTIP 599
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 1 APVSTMP 7
APV T+P
Sbjct: 606 APVPTIP 612
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 1 APVSTMP 7
APV T+P
Sbjct: 605 APVPTIP 611
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 1 APVSTMP 7
APV T+P
Sbjct: 592 APVPTIP 598
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 1 APVSTMP 7
APV T+P
Sbjct: 592 APVPTIP 598
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 APVSTMPKRM 10
+P S +P+R+
Sbjct: 1956 SPASLLPRRL 1965
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 APVSTMP 7
APV T+P
Sbjct: 592 APVPTIP 598
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 1 APVSTMP 7
APV T+P
Sbjct: 592 APVPTIP 598
>sp|VP22_HHV11|TEGUMENT protein VP22|Human herpesvirus 1 (strain 17)
Query: 1 APVSTMPKR 9
AP ST P R
Sbjct: 156 APASTAPTR 164
>sp|NSS_BUNL7|NON-STRUCTURAL protein NS-S|Bunyavirus La Crosse (isolate Aedes
Query: 4 STMPKR 9
STMP+R
Sbjct: 37 STMPQR 42
>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P
Query: 1 APVSTMPKR 9
APV +PK
Sbjct: 92 APVKNLPKE 100
123|Sequence|611|620|MPKRMSSEGP
>sp|NSP3_ROTJ1|NON-STRUCTURAL protein 3|Rotavirus X (strain
Query: 1 MPKRMS 6
+PKRMS
Sbjct: 55 LPKRMS 60
>sp|NSP3_ROTB2|NON-STRUCTURAL protein 3|Rotavirus X (isolate
Query: 1 MPKRMS 6
+PKRMS
Sbjct: 55 LPKRMS 60
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PKRMSSEGP 10
P R SEGP
Sbjct: 311 PARSQSEGP 319
>sp|NCAP_UUKS|NUCLEOPROTEIN virus (strain S23) (UUKV)
Query: 3 KRMSSEG 9
KR+S EG
Sbjct: 82 KRLSEEG 88
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 PKRMSSEGP 10
P+RMSS P
Sbjct: 454 PERMSSCKP 462
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 3 KRMSSEG 9
KR++SEG
Sbjct: 859 KRVASEG 865
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 3 KRMSSEG 9
KR++SEG
Sbjct: 859 KRVASEG 865
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 PKRMSSEGP 10
P+RMSS P
Sbjct: 453 PERMSSCRP 461
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 MPKRMSSEG 9
+PK SS+G
Sbjct: 359 LPKDWSSQG 367
124|Sequence|616|625|SSEGPPRMSP
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 4 GPPRMSP 10
GPPR P
Sbjct: 13 GPPRRVP 19
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SSEGPPR 7
S+EGP R
Sbjct: 320 STEGPQR 326
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 4 GPPRMS 9
PPRMS
Sbjct: 745 APPRMS 750
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 4 GPPRMS 9
PPRMS
Sbjct: 743 APPRMS 748
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 5 PPRMSP 10
PP M+P
Sbjct: 297 PPNMTP 302
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 4 GPPRMS 9
PPRMS
Sbjct: 746 APPRMS 751
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 4 GPPRMS 9
PPRMS
Sbjct: 766 APPRMS 771
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 5 PPRMSP 10
PP M+P
Sbjct: 297 PPNMTP 302
>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 5 PPRMSP 10
PP M+P
Sbjct: 297 PPNMTP 302
>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 5 PPRMSP 10
PP M+P
Sbjct: 297 PPNMTP 302
>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 5 PPRMSP 10
PP M+P
Sbjct: 297 PPNMTP 302
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 5 PPRMSP 10
PP M+P
Sbjct: 297 PPNMTP 302
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 5 PPRMSP 10
PP M+P
Sbjct: 297 PPNMTP 302
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 5 PPRMSP 10
PP M+P
Sbjct: 297 PPNMTP 302
>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 5 PPRMSP 10
PP M+P
Sbjct: 297 PPNMTP 302
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 2 SEGPPRMSP 10
S+GPP P
Sbjct: 299 SDGPPTGYP 307
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 4 GPPRM 8
GPPRM
Sbjct: 108 GPPRM 112
>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 5 PPRMSP 10
PP M+P
Sbjct: 297 PPNMTP 302
>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 5 PPRMSP 10
PP M+P
Sbjct: 297 PPNMTP 302
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 2 SEGPPRMSP 10
S+GPP P
Sbjct: 299 SDGPPTGYP 307
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SEGPPRMSP 10
S+GPP P
Sbjct: 299 SDGPPTGYP 307
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 2 SEGPPRMSP 10
S+GPP P
Sbjct: 299 SDGPPTGYP 307
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 4 GPPRM 8
GPPRM
Sbjct: 83 GPPRM 87
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 SEGPPRMSP 10
S+GPP P
Sbjct: 299 SDGPPTGYP 307
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 2 SEGPPRMSP 10
S+GPP P
Sbjct: 299 SDGPPTGYP 307
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 5 PPRMSP 10
PP M+P
Sbjct: 297 PPNMTP 302
>sp|VP6_ROTHS|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 5 PPRMSP 10
PP M+P
Sbjct: 297 PPNMTP 302
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 5 PPRMSP 10
PP M+P
Sbjct: 297 PPNMTP 302
>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 5 PPRMSP 10
PP M+P
Sbjct: 297 PPNMTP 302
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 4 GPPRMS 9
PPRMS
Sbjct: 749 APPRMS 754
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 4 GPPRMS 9
PPRMS
Sbjct: 746 APPRMS 751
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 4 GPPRMS 9
PPRMS
Sbjct: 746 APPRMS 751
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 5 PPRMSP 10
PP +SP
Sbjct: 273 PPNLSP 278
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 4 GPPRMS 9
PPRMS
Sbjct: 745 APPRMS 750
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 4 GPPRMS 9
PPRMS
Sbjct: 745 APPRMS 750
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 4 GPPRMS 9
PPRMS
Sbjct: 744 APPRMS 749
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 4 GPPRMS 9
PPRMS
Sbjct: 746 APPRMS 751
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 4 GPPRMS 9
PPRMS
Sbjct: 744 APPRMS 749
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 4 GPPRMS 9
PPRMS
Sbjct: 744 APPRMS 749
125|Sequence|621|630|PRMSPKAQRH
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 3 MSPKAQR 9
++PKAQR
Sbjct: 163 LTPKAQR 169
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 MSPKAQR 9
++PKAQR
Sbjct: 163 LTPKAQR 169
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 3 MSPKAQR 9
++PKAQR
Sbjct: 163 LTPKAQR 169
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 3 MSPKAQR 9
++PKAQR
Sbjct: 163 LTPKAQR 169
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 3 MSPKAQR 9
++PKAQR
Sbjct: 163 LTPKAQR 169
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 MSPKAQR 9
++PKAQR
Sbjct: 163 LTPKAQR 169
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 2 RMSPKAQR 9
R SPKAQR
Sbjct: 251 RSSPKAQR 258
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 MSPKAQRH 10
+ PK Q+H
Sbjct: 1721 VKPKIQKH 1728
126|Sequence|626|635|KAQRHPRNHR
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 4 RHPRN 8
RHPRN
Sbjct: 286 RHPRN 290
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 4 RHPRN 8
RHPRN
Sbjct: 286 RHPRN 290
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 QRHPRNH 9
QRH R+H
Sbjct: 498 QRHQRHH 504
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 3 QRHPRNHR 10
Q HP HR
Sbjct: 1659 QSHPEAHR 1666
>sp|Y172_ADE02|UNCHARACTERIZED protein D-172|Human adenovirus C serotype 2
Query: 1 KAQRHPRNHR 10
K H RNHR
Sbjct: 45 KGVNHTRNHR 54
>sp|PG112_VAR67|LATE protein OPG112|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 QRHPRN 8
+RHP N
Sbjct: 33 KRHPNN 38
>sp|PG112_VACCC|LATE protein OPG112|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 QRHPRN 8
+RHP N
Sbjct: 33 KRHPNN 38
>sp|PG112_VACCA|LATE protein OPG112|Vaccinia virus (strain Ankara) (VACV)
Query: 3 QRHPRN 8
+RHP N
Sbjct: 33 KRHPNN 38
>sp|H7_VARV|LATE protein H7|Variola virus
Query: 3 QRHPRN 8
+RHP N
Sbjct: 33 KRHPNN 38
>sp|H7_VACCT|LATE protein H7|Vaccinia virus (strain Tian Tan)
Query: 3 QRHPRN 8
+RHP N
Sbjct: 33 KRHPNN 38
127|Sequence|631|640|PRNHRVSAGR
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 PRNHRVSA 8
P HRVSA
Sbjct: 209 PHKHRVSA 216
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 PRNHRVSA 8
P HRVSA
Sbjct: 209 PHKHRVSA 216
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 PRNHRVSA 8
P HRVSA
Sbjct: 209 PHKHRVSA 216
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 PRNHRVSA 8
P HRVSA
Sbjct: 201 PHRHRVSA 208
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 PRNHRVSA 8
P HRVSA
Sbjct: 202 PHRHRVSA 209
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 PRNHRVSA 8
P HRVSA
Sbjct: 202 PHRHRVSA 209
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 1 PRNHRVSA 8
P HRVSA
Sbjct: 217 PFRHRVSA 224
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 PRNHRVSAG 9
P+NH +AG
Sbjct: 452 PQNHSETAG 460
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 1 PRNHRVSAG 9
P+NH +AG
Sbjct: 452 PQNHSETAG 460
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 PRNHRVSAG 9
P+NH +AG
Sbjct: 452 PQNHSETAG 460
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 PRNHRVSAG 9
P+NH +AG
Sbjct: 452 PQNHSETAG 460
>sp|TAT_HV1U4|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 PRNHRVSAGR 10
P++ RVSAG+
Sbjct: 75 PQSQRVSAGQ 84
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 RNHRVSAGR 10
R HRVS G+
Sbjct: 490 RRHRVSNGQ 498
128|Sequence|636|645|VSAGRGSISS
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 SAGRGSIS 9
SAGRG ++
Sbjct: 240 SAGRGDVA 247
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 SAGRGSIS 9
SAGRG ++
Sbjct: 240 SAGRGDVA 247
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VSAGRGSISS 10
VSAG G + S
Sbjct: 1124 VSAGSGEVDS 1133
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VSAGRGSISS 10
VSAG G + S
Sbjct: 1125 VSAGSGEVDS 1134
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VSAGRGSISS 10
VSAG G + S
Sbjct: 1125 VSAGSGEVDS 1134
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 VSAGRGS 7
VSAG+GS
Sbjct: 1124 VSAGQGS 1130
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 VSAGRGSISS 10
+++GR +SS
Sbjct: 456 INSGRAGVSS 465
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 VSAGRG 6
VSAGRG
Sbjct: 1136 VSAGRG 1141
129|Sequence|641|650|GSISSGLEFV
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate
Query: 1 GSISSGLEFV 10
G+IS+G+ +V
Sbjct: 83 GTISNGISYV 92
>sp|VL2_HPV52|MINOR capsid protein L2|Human papillomavirus 52
Query: 3 ISSGLEFV 10
I+SG++FV
Sbjct: 389 INSGIDFV 396
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 SISSGLEF 9
++++GLEF
Sbjct: 2683 AVAAGLEF 2690
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 SISSGLEF 9
++++GLEF
Sbjct: 2703 AVAAGLEF 2710
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 SISSGLEF 9
++++GLEF
Sbjct: 2733 AVAAGLEF 2740
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GSISSGLE 8
GS++ GLE
Sbjct: 262 GSLADGLE 269
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GSISSGLE 8
GS++ GLE
Sbjct: 262 GSLADGLE 269
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 SISSGLEF 9
++++GLEF
Sbjct: 2703 AVAAGLEF 2710
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 SISSGLEF 9
++++GLEF
Sbjct: 2733 AVAAGLEF 2740
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 SISSGLEF 9
++++GLEF
Sbjct: 2683 AVAAGLEF 2690
>sp|L_LYCVW|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain WE)
Query: 2 SISSGLE 8
SIS GLE
Sbjct: 355 SISKGLE 361
130|Sequence|646|655|GLEFVSHNPP
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 5 VSHNPP 10
VSHNPP
Sbjct: 1687 VSHNPP 1692
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 GLEFVSHNP 9
LEF HNP
Sbjct: 1715 ALEFFKHNP 1723
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 5 VSHNPP 10
VSHNPP
Sbjct: 1687 VSHNPP 1692
Query: 4 FVSHNP 9
+V HNP
Sbjct: 474 YVDHNP 479
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 5 VSHNPP 10
VSHNPP
Sbjct: 1687 VSHNPP 1692
Query: 4 FVSHNP 9
+V HNP
Sbjct: 474 YVDHNP 479
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 GLEFVSHNP 9
GLEF+S +P
Sbjct: 2073 GLEFLSDDP 2081
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 GLEFVSHNP 9
GLEF+S +P
Sbjct: 2073 GLEFLSDDP 2081
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 2 LEFVSH 7
LEFVSH
Sbjct: 152 LEFVSH 157
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 2 LEFVSH 7
LEFVSH
Sbjct: 152 LEFVSH 157
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 2 LEFVSH 7
LEFVSH
Sbjct: 152 LEFVSH 157
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 GLEFVSH 7
GL+FV H
Sbjct: 131 GLQFVEH 137
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 EFVSHNPP 10
EF+ ++PP
Sbjct: 483 EFLRYDPP 490
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 EFVSHNPP 10
EF+ ++PP
Sbjct: 483 EFLRYDPP 490
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 EFVSHNPP 10
EF+ ++PP
Sbjct: 483 EFLRYDPP 490
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 1 GLEFVSHNPP 10
GLEF S N P
Sbjct: 343 GLEFGSPNAP 352
>sp|E1BS_ADE40|E1B protein, small T-antigen|Human adenovirus F serotype 40
Query: 3 EFVSHNP 9
+ +SHNP
Sbjct: 53 DLLSHNP 59
>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LEFVSHNP 9
LE+ H+P
Sbjct: 90 LEYAKHHP 97
>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain
Query: 2 LEFVSHNP 9
LE+ H+P
Sbjct: 88 LEYAKHHP 95
>sp|ORF3_HEVPA|PROTEIN ORF3|Hepatitis E virus genotype 1
Query: 1 GLEFVSHNPP 10
GL+ V NPP
Sbjct: 76 GLDLVFANPP 85
>sp|ORF3_HEVCH|PROTEIN ORF3|Hepatitis E virus genotype 1
Query: 1 GLEFVSHNPP 10
GL+ V NPP
Sbjct: 76 GLDLVFANPP 85
>sp|ORF3_HEVBU|PROTEIN ORF3|Hepatitis E virus genotype 1
Query: 1 GLEFVSHNPP 10
GL+ V NPP
Sbjct: 76 GLDLVFANPP 85
>sp|ICP22_VZVO|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 5 VSHNPP 10
VSH PP
Sbjct: 128 VSHRPP 133
>sp|ICP22_VZVD|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Dumas)
Query: 5 VSHNPP 10
VSH PP
Sbjct: 128 VSHRPP 133
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 6 SHNPP 10
SH+PP
Sbjct: 723 SHDPP 727
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 1 GLEFVSHNPP 10
GL+ V ++PP
Sbjct: 298 GLDGVGYSPP 307
131|Sequence|651|660|SHNPPSEAAT
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 SHNPPSEA 8
S+NPPS+
Sbjct: 1940 SYNPPSDG 1947
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 SHNPPSE 7
SHNPP +
Sbjct: 1688 SHNPPEK 1694
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 SHNPPSE 7
SHNPP +
Sbjct: 1688 SHNPPEK 1694
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 SHNPPSE 7
SHNPP +
Sbjct: 1688 SHNPPEK 1694
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 HNPPSEAAT 10
HNPP +T
Sbjct: 1356 HNPPIRTST 1364
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 SHNPPSEA 8
SH PPS +
Sbjct: 487 SHKPPSAS 494
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HNPPSE 7
HN PSE
Sbjct: 87 HNVPSE 92
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HNPPSE 7
HN PSE
Sbjct: 87 HNVPSE 92
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 SHNPP 5
+HNPP
Sbjct: 251 THNPP 255
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 3 NPPSEAAT 10
NP S+AAT
Sbjct: 38 NPDSDAAT 45
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 4 PPSEAA 9
PP EAA
Sbjct: 138 PPEEAA 143
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 HNPPSEAAT 10
+NP S AAT
Sbjct: 466 NNPASTAAT 474
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 HNPPSEAAT 10
+NP S AAT
Sbjct: 466 NNPASTAAT 474
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 2 HNPPSEA 8
H PP EA
Sbjct: 271 HEPPDEA 277
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 SHNPPSE 7
SH+PP +
Sbjct: 723 SHDPPDD 729
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 HNPPSE 7
H PPS+
Sbjct: 1110 HGPPSK 1115
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 SHNPP 5
+HNPP
Sbjct: 251 THNPP 255
132|Sequence|656|665|SEAATPPVAR
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 5 TPPVAR 10
TPPVAR
Sbjct: 16 TPPVAR 21
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 5 TPPVAR 10
TPPVAR
Sbjct: 16 TPPVAR 21
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 5 TPPVAR 10
TPPVAR
Sbjct: 16 TPPVAR 21
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 5 TPPVAR 10
TPPVAR
Sbjct: 16 TPPVAR 21
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 5 TPPVAR 10
TPPVAR
Sbjct: 16 TPPVAR 21
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 5 TPPVAR 10
TPPVAR
Sbjct: 16 TPPVAR 21
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 SEAATPP 7
SEA+TPP
Sbjct: 1585 SEASTPP 1591
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 SEAATPP 7
SEA+TPP
Sbjct: 1585 SEASTPP 1591
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 SEAATPP 7
SEA+TPP
Sbjct: 1585 SEASTPP 1591
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 SEAATPP 7
SEA+TPP
Sbjct: 1585 SEASTPP 1591
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 5 TPPVAR 10
TPP AR
Sbjct: 532 TPPTAR 537
>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)
Query: 3 AATPPVA 9
AATPPV
Sbjct: 239 AATPPVV 245
>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)
Query: 3 AATPPVA 9
AATPPV
Sbjct: 239 AATPPVV 245
>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)
Query: 3 AATPPVA 9
AATPPV
Sbjct: 239 AATPPVV 245
>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)
Query: 3 AATPPV 8
AATPPV
Sbjct: 231 AATPPV 236
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 SEAATPP 7
SEA++PP
Sbjct: 1578 SEASSPP 1584
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 SEAATPP 7
SEA++PP
Sbjct: 1578 SEASSPP 1584
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 SEAATPP 7
SEA++PP
Sbjct: 1578 SEASSPP 1584
133|Sequence|661|670|PPVARTSPSG
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 1 PPVARTSPSG 10
PP R+SP+
Sbjct: 320 PPKLRSSPAA 329
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 ARTSPSG 10
ART+P G
Sbjct: 76 ARTAPHG 82
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 ARTSPSG 10
ART+P G
Sbjct: 76 ARTAPHG 82
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 2 PVARTSPSG 10
PV TSP+G
Sbjct: 11 PVVTTSPAG 19
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate
Query: 3 VARTSPSG 10
VAR SP G
Sbjct: 21 VARVSPFG 28
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 VARTSPSG 10
VAR SP G
Sbjct: 21 VARVSPFG 28
134|Sequence|666|675|TSPSGGTWSS
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 TSPSGGTWS 9
T+P GG W+
Sbjct: 68 TAPPGGAWT 76
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 GGTWSS 10
GGTWSS
Sbjct: 309 GGTWSS 314
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 SPSGGTWS 9
SP+G +W+
Sbjct: 1651 SPAGSSWN 1658
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 SPSGGTWS 9
SP+G +W+
Sbjct: 1651 SPAGSSWN 1658
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 SPSGGTWS 9
SP+G +W+
Sbjct: 1651 SPAGSSWN 1658
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 1 TSPSGGTWS 9
+ P GG+WS
Sbjct: 100 SEPGGGSWS 108
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 SPSGGTWS 9
+PS G WS
Sbjct: 1253 NPSEGAWS 1260
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TSPSGG 6
TSPSGG
Sbjct: 353 TSPSGG 358
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 3 PSGGTWSS 10
PSGG + S
Sbjct: 784 PSGGVFQS 791
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 3 PSGGTWSS 10
PSGG + S
Sbjct: 784 PSGGVFQS 791
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TSPSGG 6
TSPSGG
Sbjct: 355 TSPSGG 360
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 2 SPSGGTWS 9
SPSGG ++
Sbjct: 650 SPSGGEYT 657
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 4 SGGTW 8
SGGTW
Sbjct: 247 SGGTW 251
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 5 GGTWS 9
GGTWS
Sbjct: 71 GGTWS 75
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 TSPSGGTW 8
T+P G+W
Sbjct: 1969 TAPCAGSW 1976
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 4 SGGTW 8
SGGTW
Sbjct: 243 SGGTW 247
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 2 SPSGGTW 8
SPS TW
Sbjct: 238 SPSASTW 244
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 4 SGGTW 8
SGGTW
Sbjct: 308 SGGTW 312
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 4 SGGTW 8
SGGTW
Sbjct: 302 SGGTW 306
135|Sequence|671|680|GTWSSVVSGV
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 GTWSSVVSGV 10
GTWSS ++GV
Sbjct: 310 GTWSSYIAGV 319
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 GTWSSVVS 8
GTW SV+S
Sbjct: 425 GTWYSVIS 432
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 GTWSSVVS 8
GTW SV+S
Sbjct: 425 GTWYSVIS 432
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 GTWSSVVS 8
GTW SV+S
Sbjct: 424 GTWYSVIS 431
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 GTWSSVVS 8
GTW SV+S
Sbjct: 424 GTWYSVIS 431
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 GTWSSVV 7
G WSS+V
Sbjct: 393 GQWSSIV 399
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 1 GTWSSVVSGV 10
G WSS+V V
Sbjct: 391 GHWSSIVKFV 400
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 1 GTWSSVV 7
G WSS+V
Sbjct: 392 GHWSSIV 398
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 1 GTWSSVVSG 9
G+W+ VSG
Sbjct: 145 GSWACAVSG 153
>sp|TEG7_HHV6Z|TEGUMENT protein UL51 homolog|Human herpesvirus 6B (strain Z29)
Query: 3 WSSVVSG 9
WSSV G
Sbjct: 214 WSSVTEG 220
>sp|CAP6_ADE41|PRE-PROTEIN VI|Human adenovirus F serotype 41
Query: 2 TWSSVVSGV 10
+WSS+ SG+
Sbjct: 36 SWSSLWSGI 44
>sp|CAP6_ADE40|PRE-PROTEIN VI|Human adenovirus F serotype 40
Query: 2 TWSSVVSGV 10
+WSS+ SG+
Sbjct: 36 SWSSLWSGI 44
>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GTWSSVVSG 9
G WS V+G
Sbjct: 3 GKWSKRVTG 11
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 GTWSSVVSG 9
GT+ SVV+G
Sbjct: 493 GTYGSVVAG 501
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 WSSVVSG 9
WS VV+G
Sbjct: 1689 WSVVVNG 1695
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 WSSVVSG 9
WS VV+G
Sbjct: 1709 WSVVVNG 1715
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 WSSVVSG 9
WS VV+G
Sbjct: 1739 WSVVVNG 1745
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 TWSSVVS 8
TWSS+ +
Sbjct: 587 TWSSITN 593
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 TWSSVVS 8
TWSS+ +
Sbjct: 587 TWSSITN 593
>sp|NEF_HV1S1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GTWSSVVSG 9
G WS +SG
Sbjct: 3 GKWSKRMSG 11
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 WSSVVSG 9
WS VV+G
Sbjct: 1709 WSVVVNG 1715
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 WSSVVSG 9
WS VV+G
Sbjct: 1739 WSVVVNG 1745
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 WSSVVSG 9
WS VV+G
Sbjct: 1689 WSVVVNG 1695
>sp|VE2_HPV56|REGULATORY protein E2|Human papillomavirus 56
Query: 3 WSSVVSGV 10
W V SGV
Sbjct: 88 WQKVCSGV 95
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 GTWSSV 6
G WSS+
Sbjct: 568 GAWSSI 573
136|Sequence|676|685|VVSGVPRLSP
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 VSGVPR 7
+SGVPR
Sbjct: 601 ISGVPR 606
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 3 SGVPRL 8
SG+PRL
Sbjct: 392 SGIPRL 397
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 1 VVSGVPRLSP 10
VV+G P L+P
Sbjct: 84 VVTGGPGLNP 93
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 1 VVSGVPRL 8
++SG PR+
Sbjct: 128 ILSGAPRM 135
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I01A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 SGVPRLSP 10
+G P+L+P
Sbjct: 61 TGAPQLNP 68
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 VSGVPRLS 9
VSG+P LS
Sbjct: 89 VSGLPELS 96
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 VSGVPR 7
VSGVP+
Sbjct: 593 VSGVPK 598
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 VSGVPR 7
VSGVP+
Sbjct: 593 VSGVPK 598
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 VSGVPR 7
VSGVP+
Sbjct: 593 VSGVPK 598
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 VVSGVPRLSP 10
++SG RL+P
Sbjct: 1561 IMSGEGRLTP 1570
137|Sequence|681|690|PRLSPKTHRP
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 RLSPKTHRP 10
R+SP+T+RP
Sbjct: 1651 RVSPRTYRP 1659
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 RLSPKTHRP 10
R+SP+T+RP
Sbjct: 1651 RVSPRTYRP 1659
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 RLSPKTHRP 10
R+SP+T+RP
Sbjct: 1651 RVSPRTYRP 1659
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 PRLSPKTHRP 10
P L+P +H+P
Sbjct: 527 PELTPGSHQP 536
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 1 PRLSPKTHRP 10
P L+P +H+P
Sbjct: 527 PELTPGSHQP 536
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 1 PRLSPKTHR 9
PR++ +THR
Sbjct: 142 PRIAAQTHR 150
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 PRLSPKTHRP 10
P +SP HRP
Sbjct: 2300 PVISPPAHRP 2309
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 RLSPKTHRP 10
R+SP+ +RP
Sbjct: 1651 RVSPREYRP 1659
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 1 PRLSPKTHRP 10
P +P THRP
Sbjct: 128 PHGAPATHRP 137
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 PRLSPKTHRP 10
P +P THRP
Sbjct: 128 PHGAPATHRP 137
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 PRLSPKTHRP 10
P +P THRP
Sbjct: 128 PHGAPATHRP 137
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 2 RLSPKTH 8
RL+P TH
Sbjct: 228 RLAPATH 234
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PRLSPKTHR 9
PR+ +THR
Sbjct: 142 PRIVAQTHR 150
>sp|VIF_HV2UC|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 LSPKTHRP 10
L+P+TH P
Sbjct: 199 LAPRTHFP 206
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 PRLSPKT 7
PR+ PKT
Sbjct: 47 PRVHPKT 53
>sp|VIF_HV1LW|TRUNCATED virion infectivity factor|Human immunodeficiency virus type 1
Query: 1 PRLSPKTHRP 10
PR+S + H P
Sbjct: 49 PRISSEVHIP 58
>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 PRLSPKTHRP 10
PR+S + H P
Sbjct: 49 PRISSEVHIP 58
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 LSPKTHR 9
+ PKTHR
Sbjct: 1878 IMPKTHR 1884
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 PKTHRP 10
PKT RP
Sbjct: 18 PKTSRP 23
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PKTHRP 10
PKT RP
Sbjct: 18 PKTSRP 23
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 PRLSPKTHR 9
PRL TH+
Sbjct: 821 PRLCEYTHK 829
>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 PRLSPKTHRP 10
PR+S + H P
Sbjct: 49 PRISSEVHIP 58
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 PRLSPKTHRP 10
PR+S + H P
Sbjct: 49 PRISSEVHIP 58
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 PRLSPKTHRP 10
PR+S + H P
Sbjct: 49 PRISSEVHIP 58
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 PRLSPKTHRP 10
PR+S + H P
Sbjct: 49 PRISSEVHIP 58
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 PRLSPKTHRP 10
PR+S + H P
Sbjct: 49 PRISSEVHIP 58
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 PRLSPKTHRP 10
PR+S + H P
Sbjct: 49 PRISSEVHIP 58
>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 PRLSPKTHRP 10
PR+S + H P
Sbjct: 49 PRISSEVHIP 58
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 PRLSPKTHRP 10
PR+S + H P
Sbjct: 49 PRISSEVHIP 58
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 PRLSPKTHRP 10
PR+S + H P
Sbjct: 49 PRISSEVHIP 58
138|Sequence|686|695|KTHRPRSPRQ
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 HRPRSPR 9
HRPR P+
Sbjct: 2276 HRPRRPK 2282
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 THRPRSPR 9
TH P SPR
Sbjct: 145 THVPLSPR 152
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 THRPRSPR 9
TH P SPR
Sbjct: 145 THVPLSPR 152
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 THRPRSPR 9
TH P SPR
Sbjct: 145 THVPLSPR 152
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 THRPRSPR 9
TH P SPR
Sbjct: 145 THVPLSPR 152
>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)
Query: 2 THRPRSPR 9
TH RSPR
Sbjct: 245 THHQRSPR 252
>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 RPRSPR 9
RPR PR
Sbjct: 272 RPRKPR 277
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 THRPRSPR 9
TH P SPR
Sbjct: 145 THIPLSPR 152
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 1 KTHRPRSPRQ 10
+ HRP+S +
Sbjct: 482 RVHRPKSTQH 491
>sp|PG052_VAR67|PROTEIN OPG052|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 HRPRSP 8
HRPR+P
Sbjct: 20 HRPRTP 25
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 KTHRPRSPR 9
K PR+PR
Sbjct: 815 KAWAPRAPR 823
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 1 KTHRPRSPRQ 10
++H PR+P +
Sbjct: 594 ESHAPRAPSE 603
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 THRPRSPR 9
TH P SPR
Sbjct: 145 THIPLSPR 152
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 THRPRSPR 9
H+P SPR
Sbjct: 143 VHQPISPR 150
>sp|CAP8_ADE02|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 2
Query: 3 HRPRSPRQ 10
HR RSP Q
Sbjct: 114 HRVRSPGQ 121
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 THRPRSPRQ 10
T RPR P Q
Sbjct: 283 TDRPRPPHQ 291
>sp|CAP8_ADE05|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 5
Query: 3 HRPRSPRQ 10
HR RSP Q
Sbjct: 114 HRVRSPGQ 121
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 HRPRSPR 9
H+P SPR
Sbjct: 144 HQPISPR 150
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 THRPRSPR 9
+H P SPR
Sbjct: 145 SHVPLSPR 152
>sp|CEP3_HCMVM|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 PRSPRQ 10
PR+PRQ
Sbjct: 164 PRTPRQ 169
>sp|CEP3_HCMVA|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PRSPRQ 10
PR+PRQ
Sbjct: 164 PRTPRQ 169
139|Sequence|691|700|RSPRQNSIGN
>sp|TRX1_HHV7J|TRIPLEX capsid protein 1|Human herpesvirus 7 (strain JI)
Query: 3 PRQNSI 8
PRQN+I
Sbjct: 174 PRQNAI 179
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 4 RQNSIGN 10
RQ+S+GN
Sbjct: 1434 RQDSMGN 1440
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 3 PRQNSI 8
P+QNSI
Sbjct: 180 PKQNSI 185
>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)
Query: 1 RSPRQNSIGN 10
R+P QN++ N
Sbjct: 3 RNPDQNTLPN 12
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 RQNSIGN 10
RQ+S+GN
Sbjct: 1434 RQDSMGN 1440
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 RQNSIGN 10
RQ+S+GN
Sbjct: 1434 RQDSMGN 1440
>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 1 RSPRQNSIGN 10
R+P QN++ N
Sbjct: 3 RNPDQNTLPN 12
>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 1 RSPRQNSIGN 10
R+P QN++ N
Sbjct: 3 RNPDQNTLPN 12
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PRQNSI 8
P+QNSI
Sbjct: 180 PKQNSI 185
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 RSPRQNSIGN 10
+SPR N GN
Sbjct: 1121 QSPRINFCGN 1130
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 RSPRQNSIGN 10
+SPR N GN
Sbjct: 1117 QSPRINFCGN 1126
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 RSPRQNSIGN 10
+SPR N GN
Sbjct: 1117 QSPRINFCGN 1126
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 4 RQNSIGN 10
RQN IG+
Sbjct: 510 RQNQIGS 516
>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 1 RSPRQNSIGN 10
R+P QN+ N
Sbjct: 3 RNPDQNTFPN 12
>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)
Query: 1 RSPRQNSIGN 10
R+P QN+ N
Sbjct: 3 RNPDQNTFPN 12
>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara)
Query: 1 RSPRQNSIGN 10
R+P QN+ N
Sbjct: 3 RNPDQNTFPN 12
>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)
Query: 1 RSPRQNSIGN 10
R+P QN+ N
Sbjct: 3 RNPDQNTFPN 12
140|Sequence|696|705|NSIGNTPSGP
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NSIGNTPSGP 10
N IG+TP P
Sbjct: 490 NRIGDTPETP 499
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NSIGNTPSGP 10
N IG+TP P
Sbjct: 490 NRIGDTPETP 499
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 NSIGNTPSGP 10
NSI NTP P
Sbjct: 195 NSIMNTPVYP 204
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 5 NTPSGP 10
+TP+GP
Sbjct: 3898 DTPTGP 3903
Query: 5 NTPSGP 10
N P+GP
Sbjct: 3516 NAPNGP 3521
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 NTPSGP 10
+TP+GP
Sbjct: 3898 DTPTGP 3903
Query: 5 NTPSGP 10
N P+GP
Sbjct: 3516 NAPNGP 3521
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 NSIGNTPSGP 10
+++G+ PSGP
Sbjct: 992 HNLGSQPSGP 1001
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 IGNTPSGP 10
+ +TP GP
Sbjct: 4193 VTDTPKGP 4200
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NSIGN---TPSGP 10
N+IG+ TPS P
Sbjct: 520 NNIGSLTRTPSSP 532
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NSIGN---TPSGP 10
N+IG+ TPS P
Sbjct: 520 NNIGSLTRTPSSP 532
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 IGNTPSGP 10
+ +TP GP
Sbjct: 4193 VTDTPKGP 4200
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 IGNTPSGP 10
+ +TP GP
Sbjct: 4216 VTDTPKGP 4223
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 IGNTPSGP 10
+ +TP GP
Sbjct: 4216 VTDTPKGP 4223
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 IGNTPSG 9
IGN P G
Sbjct: 558 IGNLPDG 564
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 IGNTPSG 9
IGN P G
Sbjct: 558 IGNLPDG 564
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 4 GNTPSG 9
GNTP G
Sbjct: 661 GNTPHG 666
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 1 NSIGNTPSGP 10
+ + +TPS P
Sbjct: 139 SQLSSTPSAP 148
141|Sequence|701|710|TPSGPVLASP
>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P
Query: 1 TPSGPVL 7
TPSGPV
Sbjct: 126 TPSGPVF 132
>sp|UL136_HCMVM|PROTEIN UL136|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PSGPVLASP 10
P+ P L+SP
Sbjct: 166 PAPPALSSP 174
>sp|M1_I78A3|MATRIX protein 1|Influenza A virus (strain A/Mallard/New
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)
Query: 1 TPSGPVL 7
PSGPVL
Sbjct: 288 APSGPVL 294
>sp|M1_I68A0|MATRIX protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I82A7|MATRIX protein 1|Influenza A virus (strain A/Swine/Hong
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I68A6|MATRIX protein 1|Influenza A virus (strain A/Northern
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I57A5|MATRIX protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I50A0|MATRIX protein 1|Influenza A virus (strain A/Fort
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I02A4|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I02A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I02A1|MATRIX protein 1|Influenza A virus (strain A/Guinea
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 9 PSGPLKA 15
>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PSGPVLASP 10
P GP+L SP
Sbjct: 216 PQGPMLPSP 224
>sp|M1_I89A2|MATRIX protein 1|Influenza A virus (strain A/Beijing/353/1989
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I83A8|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I78A8|MATRIX protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I76A6|MATRIX protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I75A0|MATRIX protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I73A5|MATRIX protein 1|Influenza A virus (strain A/Port
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I72A8|MATRIX protein 1|Influenza A virus (strain A/Udorn/1972
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I72A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I72A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I72A2|MATRIX protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I71A1|MATRIX protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I70A0|MATRIX protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I57A0|MATRIX protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I33A0|MATRIX protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I80A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I69A0|MATRIX protein 1|Influenza A virus (strain A/England/878/1969
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I68A4|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I51A0|MATRIX protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I35A3|MATRIX protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|U24A_HHV6Z|UNCHARACTERIZED protein U24A|Human herpesvirus 6B (strain Z29)
Query: 1 TPSGPVLASP 10
+P G +L+SP
Sbjct: 44 SPFGEILSSP 53
>sp|M1_I88A5|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I88A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/8/1988
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I85A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I83A1|MATRIX protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I80A2|MATRIX protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I78A7|MATRIX protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I77AB|MATRIX protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I77A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I67A0|MATRIX protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I61A1|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I54A2|MATRIX protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I54A1|MATRIX protein 1|Influenza A virus (strain A/Swine/May/1954
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I45A0|MATRIX protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I43A0|MATRIX protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I40A0|MATRIX protein 1|Influenza A virus (strain A/Hickox/1940
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I18A0|MATRIX protein 1|Influenza A virus (strain A/Brevig
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I79A0|MATRIX protein 1|Influenza A virus (strain A/Bangkok/1/1979
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I77AC|MATRIX protein 1|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I77AA|MATRIX protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I57A3|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I57A2|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I96A3|MATRIX protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I96A2|MATRIX protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I88A7|MATRIX protein 1|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I82A9|MATRIX protein 1|Influenza A virus (strain A/Philippines/2/1982
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I81A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I80AA|MATRIX protein 1|Influenza A virus (strain A/India/6263/1980
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I77A9|MATRIX protein 1|Influenza A virus (strain A/Equine/New
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I67A2|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I59A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I37A0|MATRIX protein 1|Influenza A virus (strain A/Swine/29/1937
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I07A0|MATRIX protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 13 PSGPLKA 19
>sp|M1_I00A1|MATRIX protein 1|Influenza A virus (strain A/New
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I01A0|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I96A0|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|M1_I02A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 PSGPVLA 8
PSGP+ A
Sbjct: 16 PSGPLKA 22
>sp|VL2_HPV22|MINOR capsid protein L2|Human papillomavirus 22
Query: 1 TPSGP-VLASP 10
TPSGP ++ SP
Sbjct: 491 TPSGPAIIQSP 501
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 TPSGPV 6
TP+GPV
Sbjct: 470 TPTGPV 475
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 TPSGPV 6
TP+GPV
Sbjct: 470 TPTGPV 475
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 TPSGPV 6
TP+GPV
Sbjct: 470 TPTGPV 475
142|Sequence|706|715|VLASPQAGII
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 LASPQAGII 10
L PQAGI+
Sbjct: 1023 LQRPQAGIV 1031
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 LASPQAGII 10
L PQAGI+
Sbjct: 1020 LQRPQAGIV 1028
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 LASPQAGII 10
L PQAGI+
Sbjct: 1021 LQRPQAGIV 1029
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 VLASPQAGII 10
VLA P+AG +
Sbjct: 1025 VLACPRAGFV 1034
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 VLASPQAGII 10
VLA P+AG +
Sbjct: 1025 VLACPRAGFV 1034
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 VLASPQAGII 10
VLA P+AG +
Sbjct: 1025 VLACPRAGFV 1034
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 VLASPQAGII 10
VLA P+AG +
Sbjct: 1025 VLACPRAGFV 1034
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 VLASPQAGII 10
VLA P+AG +
Sbjct: 1025 VLACPRAGFV 1034
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 ASPQAGII 10
ASP++GI+
Sbjct: 1801 ASPKSGIL 1808
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 3 ASPQAGII 10
ASP++GI+
Sbjct: 1798 ASPKSGIL 1805
>sp|VNB_INBHK|GLYCOPROTEIN NB|Influenza B virus (strain B/Hong
Query: 2 LASPQAGI 9
++SP+AG+
Sbjct: 75 ISSPRAGV 82
143|Sequence|711|720|QAGIIPTEAV
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 QAGIIPT 7
QAG++P+
Sbjct: 1278 QAGVVPS 1284
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 AGIIPTEAV 10
AGIIPT V
Sbjct: 27 AGIIPTGNV 35
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 QAGIIPTEAV 10
+ G++P EAV
Sbjct: 587 KVGLVPREAV 596
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 QAGIIPTEAV 10
+ G++P EAV
Sbjct: 586 KVGLVPREAV 595
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 1 QAGIIPTE 8
Q G+IPT
Sbjct: 27 QIGVIPTN 34
>sp|VE2_HPV35|REGULATORY protein E2|Human papillomavirus 35
Query: 4 IIPTEAV 10
++PT+A+
Sbjct: 59 VVPTQAI 65
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 3 GIIPTEAV 10
G +P+EA+
Sbjct: 414 GAVPSEAI 421
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 AGIIPTEA 9
AG++PT A
Sbjct: 325 AGLLPTTA 332
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 AGIIPTEA 9
AG++PT A
Sbjct: 325 AGLLPTTA 332
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 AGIIPTEA 9
AG++PT A
Sbjct: 325 AGLLPTTA 332
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QAGIIPTEAV 10
Q GI+P V
Sbjct: 493 QCGIVPASQV 502
>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)
Query: 2 AGIIPTE 8
AG+IPT
Sbjct: 346 AGMIPTR 352
>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)
Query: 2 AGIIPTE 8
AG+IPT
Sbjct: 346 AGMIPTR 352
144|Sequence|716|725|PTEAVAMPIP
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 1 PTEAVAMPIP 10
PT AV P P
Sbjct: 509 PTSAVTTPTP 518
Query: 1 PTEAVAMPIP 10
PT AV P P
Sbjct: 544 PTSAVTTPTP 553
Query: 1 PTEAVAMPIP 10
PT AV P P
Sbjct: 579 PTSAVTTPTP 588
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PTEAVAMPIP 10
PT AV P P
Sbjct: 509 PTSAVTTPTP 518
Query: 1 PTEAVAMPIP 10
PT AV P P
Sbjct: 544 PTSAVTTPTP 553
Query: 1 PTEAVAMPIP 10
PT AV P P
Sbjct: 579 PTSAVTTPTP 588
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PTEAVAMPIP 10
PT AV P P
Sbjct: 523 PTSAVTTPTP 532
Query: 1 PTEAVAMPIP 10
PT AV P P
Sbjct: 544 PTSAVTTPTP 553
Query: 1 PTEAVAMPIP 10
PT AV P P
Sbjct: 558 PTSAVTTPTP 567
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PTEAVAMPIP 10
PT AV P P
Sbjct: 558 PTSAVTTPTP 567
Query: 1 PTEAVAMPIP 10
PT AV P P
Sbjct: 579 PTSAVTTPTP 588
Query: 1 PTEAVAMPIP 10
PT AV P P
Sbjct: 600 PTSAVTTPTP 609
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 PTEAVAMPIP 10
PTEA+ P P
Sbjct: 143 PTEALGGPPP 152
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 PTEAVAMPI 9
T A+AMP+
Sbjct: 1291 STSAIAMPM 1299
145|Sequence|721|730|AMPIPAASPT
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 AMPIPAASPT 10
A+ +P+ SPT
Sbjct: 220 ALTVPSGSPT 229
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 2 MPIPAASP 9
+ +PAA+P
Sbjct: 136 LEVPAATP 143
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PIPAASP 9
P+P A+P
Sbjct: 440 PVPPAAP 446
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PIPAASP 9
P+P A+P
Sbjct: 440 PVPPAAP 446
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 3 PIPAASP 9
P P ASP
Sbjct: 585 PFPFASP 591
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 3 PIPAASP 9
P P ASP
Sbjct: 585 PFPFASP 591
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 3 PIPAASP 9
P P ASP
Sbjct: 585 PFPFASP 591
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 3 PIPAASPT 10
P P+ SPT
Sbjct: 22 PTPSQSPT 29
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 AMPIPAASPT 10
A +PA+SPT
Sbjct: 439 AAEVPASSPT 448
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PIPAAS 8
PIPAAS
Sbjct: 2957 PIPAAS 2962
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PIPAAS 8
PIPAAS
Sbjct: 2957 PIPAAS 2962
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PIPAAS 8
PIPAAS
Sbjct: 2957 PIPAAS 2962
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PIPAAS 8
PIPAAS
Sbjct: 2957 PIPAAS 2962
146|Sequence|726|735|AASPTPASPA
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 ASPTPASPA 10
+ PTP SPA
Sbjct: 1948 SGPTPISPA 1956
>sp|NEC2_HHV6Z|NUCLEAR egress protein 2|Human herpesvirus 6B (strain Z29)
Query: 3 SPTPAS 8
+PTPAS
Sbjct: 267 TPTPAS 272
>sp|NEC2_HHV6U|NUCLEAR egress protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 SPTPAS 8
+PTPAS
Sbjct: 267 TPTPAS 272
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 ASPTPASPA 10
A P P +PA
Sbjct: 1918 AGPIPVTPA 1926
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 ASPTPASPA 10
A P P +PA
Sbjct: 1918 AGPIPVTPA 1926
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 ASPTPASPA 10
A P P +PA
Sbjct: 1918 AGPIPVTPA 1926
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 ASPTPASPA 10
A P P +PA
Sbjct: 1918 AGPIPVTPA 1926
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 ASPTPASPA 10
A P P +PA
Sbjct: 1918 AGPIPVTPA 1926
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 2 ASPTPASPA 10
ASPT +PA
Sbjct: 433 ASPTHMAPA 441
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 AASPTPAS 8
+A+P PAS
Sbjct: 1648 SANPAPAS 1655
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 2 ASPTPASPA 10
ASPT SPA
Sbjct: 425 ASPTHMSPA 433
>sp|DUT_MONPV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Monkeypox virus (MPXV)
Query: 1 AASPTPASPA 10
A SPT SP
Sbjct: 23 AKSPTRQSPG 32
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 4 PTPASPA 10
PTPA PA
Sbjct: 773 PTPAEPA 779
>sp|PB1F2_I18A0|PROTEIN PB1-F2|Influenza A virus (strain A/Brevig
Query: 3 SPTPAS 8
SPTP S
Sbjct: 66 SPTPVS 71
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 ASPTPASPA 10
ASPT +PA
Sbjct: 433 ASPTHMAPA 441
>sp|DUT_VACCP|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain L-IVP)
Query: 1 AASPTPASPA 10
A SPT SP
Sbjct: 19 AKSPTRQSPG 28
>sp|DUT_VACCC|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 1 AASPTPASPA 10
A SPT SP
Sbjct: 19 AKSPTRQSPG 28
>sp|DUT_VACCA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 1 AASPTPASPA 10
A SPT SP
Sbjct: 19 AKSPTRQSPG 28
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 AASPTPASP 9
A+PTP P
Sbjct: 2094 GAAPTPPVP 2102
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 AASPTPASP 9
A+PTP P
Sbjct: 2093 GAAPTPPVP 2101
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 AASPTPASP 9
A+PTP P
Sbjct: 2093 GAAPTPPVP 2101
>sp|DUT_CWPXG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Cowpox virus (strain GRI-90 /
Query: 1 AASPTPASPA 10
A SPT SP
Sbjct: 19 AKSPTRQSPG 28
147|Sequence|731|740|PASPASNRAV
>sp|PG062_VARV|PHOSPHOPROTEIN OPG062|Variola virus
Query: 1 PASPASNR 8
P+SPAS R
Sbjct: 51 PSSPASER 58
>sp|PG062_VAR67|PHOSPHOPROTEIN OPG062|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PASPASNR 8
P+SPAS R
Sbjct: 51 PSSPASER 58
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 4 PASNRAV 10
PASNR V
Sbjct: 787 PASNREV 793
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 4 PASNRAV 10
PASNR V
Sbjct: 760 PASNREV 766
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 4 PASNRAV 10
PASNR V
Sbjct: 765 PASNREV 771
>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong
Query: 3 SPASNRAV 10
SPASN+ +
Sbjct: 44 SPASNQVM 51
>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968
Query: 3 SPASNRAV 10
SPASN+ +
Sbjct: 44 SPASNQVM 51
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 1 PASPASNRAV 10
P + +SNRAV
Sbjct: 193 PLALSSNRAV 202
>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern
Query: 3 SPASNRAV 10
SPASN+ +
Sbjct: 44 SPASNQVM 51
148|Sequence|736|745|SNRAVTPSSE
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 2 NRAVTPSSE 10
NR ++PSS+
Sbjct: 216 NRLISPSSK 224
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 2 NRAVTPSSE 10
NR ++PSS+
Sbjct: 216 NRLISPSSK 224
>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 AVTPSS 9
AVTPSS
Sbjct: 34 AVTPSS 39
149|Sequence|741|750|TPSSEAKDSR
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 TPSSEAKDS 9
TPS E +DS
Sbjct: 2358 TPSIEGQDS 2366
150|Sequence|746|755|AKDSRLQDQR
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 4 SRLQDQR 10
SRL+D+R
Sbjct: 526 SRLEDRR 532
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 AKDSRLQD 8
AKD+ LQD
Sbjct: 466 AKDNTLQD 473
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 KDSRLQD 8
KD+RL+D
Sbjct: 1302 KDTRLRD 1308
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 KDSRLQD 8
KD+RL+D
Sbjct: 1303 KDTRLKD 1309
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 5 RLQDQR 10
R+QDQR
Sbjct: 287 RVQDQR 292
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 5 RLQDQR 10
R+QDQR
Sbjct: 287 RVQDQR 292
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 AKDSRLQDQR 10
+ D R+QD R
Sbjct: 13 SNDERMQDYR 22
151|Sequence|751|760|LQDQRQNSPA
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 QDQRQN 7
QDQ QN
Sbjct: 95 QDQNQN 100
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 QDQRQN 7
QDQ QN
Sbjct: 95 QDQNQN 100
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 DQRQNSPA 10
DQR +PA
Sbjct: 181 DQRSTTPA 188
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 QDQRQN 7
QDQ QN
Sbjct: 95 QDQNQN 100
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 2 QDQRQNSP 9
QD +NSP
Sbjct: 126 QDDTENSP 133
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 LQDQRQNSP 9
LQD + N P
Sbjct: 214 LQDTKSNVP 222
152|Sequence|756|765|QNSPAGNKEN
>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 NSPAGNKE 9
N PAG+K+
Sbjct: 134 NYPAGHKQ 141
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 NSPAGNKEN 10
N+P G K+N
Sbjct: 289 NAPNGKKKN 297
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 3 SPAGN 7
SPAGN
Sbjct: 210 SPAGN 214
>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 SPAGN 7
SPAGN
Sbjct: 210 SPAGN 214
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 QNSPAGN 7
QN P GN
Sbjct: 971 QNPPKGN 977
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 QNSPAGNKEN 10
+N P G KEN
Sbjct: 255 ENIPGGLKEN 264
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 QNSPAGNKEN 10
+N P G KEN
Sbjct: 255 ENIPGGLKEN 264
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 QNSPAGNKEN 10
+N P G KEN
Sbjct: 255 ENIPGGLKEN 264
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 1 QNSPAGNKEN 10
+N P G KEN
Sbjct: 263 ENIPGGLKEN 272
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 QNSPAGN 7
QN P GN
Sbjct: 971 QNPPKGN 977
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 QNSPAGN 7
QN P GN
Sbjct: 971 QNPPKGN 977
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 QNSPAGN 7
QN P GN
Sbjct: 971 QNPPKGN 977
>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P
Query: 1 QNSPAG 6
QN PAG
Sbjct: 203 QNGPAG 208
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 1 QNSPAGN 7
QN+PA N
Sbjct: 98 QNTPAAN 104
153|Sequence|761|770|GNKENIKPNE
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 4 ENIKPNE 10
ENI+PN+
Sbjct: 41 ENIRPNK 47
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 KENIKPNE 10
+ NIKP E
Sbjct: 1921 RTNIKPEE 1928
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 KENIKPNE 10
+ NIKP E
Sbjct: 1921 RTNIKPEE 1928
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 KENIKPNE 10
+ NIKP E
Sbjct: 1921 RTNIKPEE 1928
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 KENIKPNE 10
+ NIKP E
Sbjct: 1922 RTNIKPEE 1929
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 KENIKPNE 10
+ NIKP E
Sbjct: 1921 RTNIKPEE 1928
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 KENIKPNE 10
+ NIKP E
Sbjct: 1921 RTNIKPEE 1928
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 KENIKPNE 10
+ NIKP E
Sbjct: 1921 RTNIKPEE 1928
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 KENIKPNE 10
+ NIKP E
Sbjct: 1921 RTNIKPEE 1928
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 KENIKPNE 10
+ NIKP E
Sbjct: 1923 RTNIKPEE 1930
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 KENIKPNE 10
+ NIKP E
Sbjct: 1923 RTNIKPEE 1930
>sp|PG108_VACCC|ENVELOPE protein H3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 ENIKPN 9
EN+KPN
Sbjct: 250 ENMKPN 255
>sp|PG108_VAR67|ENVELOPE protein H3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 ENIKPN 9
EN+KPN
Sbjct: 251 ENMKPN 256
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 KENIKP 8
K NIKP
Sbjct: 6512 KRNIKP 6517
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 KENIKP 8
K NIKP
Sbjct: 6489 KRNIKP 6494
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 3 KENIKPNE 10
K+N+ P E
Sbjct: 418 KQNVTPRE 425
154|Sequence|766|775|IKPNETSPSF
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 NETSPSF 10
NETSPS+
Sbjct: 132 NETSPSY 138
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 KPNETSPSF 10
KP ETS SF
Sbjct: 2017 KPVETSNSF 2025
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 KPNETSPSF 10
KP ETS SF
Sbjct: 2017 KPVETSNSF 2025
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 KPNETSPS 9
KP ETSP+
Sbjct: 392 KPEETSPA 399
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 KPNETSPS 9
KP ETSP+
Sbjct: 392 KPEETSPA 399
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 KPNETSPSF 10
KPN TS +
Sbjct: 5318 KPNNTSAQY 5326
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 IKPNETS 7
+KPN TS
Sbjct: 3470 VKPNRTS 3476
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 IKPNETS 7
+KPN TS
Sbjct: 3470 VKPNRTS 3476
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 KPNETSPSF 10
KP +TS SF
Sbjct: 1994 KPVDTSNSF 2002
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 KPNETSPSF 10
KP +TS SF
Sbjct: 1994 KPVDTSNSF 2002
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 PNETSPSF 10
PN ++PSF
Sbjct: 72 PNWSTPSF 79
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 IKPNETSPS 9
+ P+E +PS
Sbjct: 584 LNPSEATPS 592
>sp|PHOSP_PI3H4|PHOSPHOPROTEIN parainfluenza 3 virus (strain
Query: 1 IKPNETS 7
IKP ETS
Sbjct: 66 IKPTETS 72
155|Sequence|771|780|TSPSFSKAEN
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 SPSFSKAEN 10
SP+FSK N
Sbjct: 2220 SPNFSKLIN 2228
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 SPSFSKAEN 10
SP+FSK N
Sbjct: 2220 SPNFSKLIN 2228
156|Sequence|776|785|SKAENKGISP
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 KAENKGISP 10
+AE G+SP
Sbjct: 270 RAEKGGLSP 278
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 ENKGISP 10
ENK ISP
Sbjct: 292 ENKKISP 298
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 ENKGISP 10
ENK ISP
Sbjct: 292 ENKKISP 298
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 4 ENKGISP 10
ENK ISP
Sbjct: 292 ENKKISP 298
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 5 NKGISP 10
NKGI+P
Sbjct: 1359 NKGIAP 1364
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 5 NKGISP 10
NKGI+P
Sbjct: 1359 NKGIAP 1364
>sp|SPI2_VARV|SERINE proteinase inhibitor 2|Variola virus
Query: 1 SKAENKGISP 10
+K EN ISP
Sbjct: 11 TKGENVFISP 20
>sp|SPI2_VAR67|SERINE proteinase inhibitor 2|Variola virus (isolate
Query: 1 SKAENKGISP 10
+K EN ISP
Sbjct: 11 TKGENVFISP 20
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 3 AENKGISP 10
A+NK ++P
Sbjct: 320 AQNKNVTP 327
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 AENKGISP 10
A N+G++P
Sbjct: 1358 AANRGVAP 1365
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 SKAENKGIS 9
SKAE G+S
Sbjct: 545 SKAEIDGVS 553
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 KAENKGISP 10
K +KGI+P
Sbjct: 324 KPHDKGINP 332
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 KAENKGISP 10
K +KGI+P
Sbjct: 324 KPHDKGINP 332
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 KAENKGISP 10
K +KGI+P
Sbjct: 324 KPHDKGINP 332
157|Sequence|781|790|KGISPVVSEH
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GISPVVSEH 10
GI PVVS H
Sbjct: 250 GIRPVVSTH 258
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 2 GISPVVSEH 10
G+SP+V+E+
Sbjct: 228 GVSPMVAEN 236
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GISPVVS 8
GI PVVS
Sbjct: 241 GIKPVVS 247
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GISPVVS 8
GI PVVS
Sbjct: 246 GIKPVVS 252
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GISPVVS 8
GI PVVS
Sbjct: 251 GIKPVVS 257
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GISPVVS 8
GI PVVS
Sbjct: 244 GIKPVVS 250
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GISPVVS 8
GI PVVS
Sbjct: 255 GIKPVVS 261
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 2 GISPVVS 8
GI PVVS
Sbjct: 245 GIKPVVS 251
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GISPVVS 8
GI PVVS
Sbjct: 255 GIKPVVS 261
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GISPVVS 8
GI PVVS
Sbjct: 251 GIKPVVS 257
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GISPVVS 8
GI PVVS
Sbjct: 250 GIKPVVS 256
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GISPVVS 8
GI PVVS
Sbjct: 262 GIKPVVS 268
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GISPVVS 8
GI PVVS
Sbjct: 247 GIKPVVS 253
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GISPVVS 8
GI PVVS
Sbjct: 248 GIKPVVS 254
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GISPVVS 8
GI PVVS
Sbjct: 258 GIKPVVS 264
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GISPVVS 8
GI PVVS
Sbjct: 252 GIKPVVS 258
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GISPVVS 8
GI PVVS
Sbjct: 252 GIKPVVS 258
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 4 SPVVSEH 10
SPV++EH
Sbjct: 205 SPVIAEH 211
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|W_NIPAV|PROTEIN W|Nipah virus
Query: 4 SPVVSEH 10
SPV++EH
Sbjct: 205 SPVIAEH 211
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 129 KGIKPYYPEH 138
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 4 SPVVSEH 10
SPV++EH
Sbjct: 205 SPVIAEH 211
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 KGISPVVSEH 10
KGI P EH
Sbjct: 127 KGIKPYYPEH 136
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 5 PVVSEH 10
P VSEH
Sbjct: 132 PTVSEH 137
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 5 PVVSEH 10
P VSEH
Sbjct: 132 PTVSEH 137
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GISPVVS 8
GI PV+S
Sbjct: 243 GIKPVIS 249
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GISPVVS 8
GI PV+S
Sbjct: 242 GIKPVIS 248
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 5 PVVSEH 10
P VSEH
Sbjct: 132 PTVSEH 137
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 5 PVVSEH 10
P VSEH
Sbjct: 132 PTVSEH 137
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 5 PVVSEH 10
P VSEH
Sbjct: 132 PTVSEH 137
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 KGISPV 6
+GISPV
Sbjct: 165 RGISPV 170
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 KGISPVVSEH 10
KG +++EH
Sbjct: 492 KGFHEIITEH 501
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 1 KGISPVV 7
KGI P++
Sbjct: 429 KGIPPII 435
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 1 KGISPVV 7
KGI P++
Sbjct: 429 KGIPPII 435
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 GISPVVSEH 10
GI P S H
Sbjct: 274 GIGPAYSTH 282
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 2 GISPVVSEH 10
G P + EH
Sbjct: 159 GCKPAIGEH 167
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 GISPVVSEH 10
G+SP V+++
Sbjct: 708 GLSPAVTKY 716
158|Sequence|786|795|VVSEHRKQID
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VSEHRKQID 10
++EHRK+I+
Sbjct: 781 LTEHRKRIE 789
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VSEHRKQID 10
++EHRK+++
Sbjct: 783 LAEHRKRVE 791
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 1 VVSEHRKQID 10
+ ++HR+Q D
Sbjct: 98 ITNQHRQQSD 107
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VVSEHRKQI 9
V+S+ +KQ+
Sbjct: 167 VISDKKKQV 175
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 VVSEHRKQID 10
+VSEH K D
Sbjct: 373 LVSEHGKGSD 382
159|Sequence|791|800|RKQIDDLKKF
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 RKQIDDLKK 9
R++ DDLKK
Sbjct: 802 RQKADDLKK 810
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 RKQIDDLKKF 10
R+Q+D +K+F
Sbjct: 5486 RRQLDVVKRF 5495
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 KQIDDLKKF 10
KQ+DD+ ++
Sbjct: 23 KQVDDILRY 31
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 KQIDDLKKF 10
KQ+DD+ ++
Sbjct: 23 KQVDDILRY 31
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RKQIDDLKKF 10
+KQI +++KF
Sbjct: 1361 QKQISNIQKF 1370
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 KQIDDLKK 9
+QID +KK
Sbjct: 622 EQIDQIKK 629
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 KQIDDLKK 9
+QID +KK
Sbjct: 622 EQIDQIKK 629
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 KQIDDLKK 9
+QID +KK
Sbjct: 622 EQIDQIKK 629
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 KQIDDLKK 9
+QID +KK
Sbjct: 622 EQIDQIKK 629
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RKQIDDLKKF 10
+KQI ++KF
Sbjct: 1362 QKQISQIQKF 1371
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 5 DDLKKF 10
DDLKK+
Sbjct: 2064 DDLKKY 2069
160|Sequence|796|805|DLKKFKNDFR
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 DLKKFKNDFR 10
DL KF D+R
Sbjct: 59 DLSKFIRDYR 68
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 1 DLKKFKND 8
DLK+FK D
Sbjct: 420 DLKQFKQD 427
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 DLKKFKND 8
DLK+FK D
Sbjct: 419 DLKQFKQD 426
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 DLKKFKNDFR 10
D++K+K+D++
Sbjct: 813 DVEKWKSDYK 822
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 DLKKFKNDF 9
D+K+F N F
Sbjct: 108 DVKQFANGF 116
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate
Query: 2 LKKFKNDF 9
+KKFK D
Sbjct: 81 IKKFKKDL 88
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 LKKFKNDF 9
+KKFK D
Sbjct: 81 IKKFKKDL 88
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 LKKFKNDF 9
+KKFK D
Sbjct: 81 IKKFKKDL 88
>sp|BZLF1_EBVA8|LYTIC switch protein BZLF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 DLKKFKN 7
D+K++KN
Sbjct: 176 DIKRYKN 182
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 LKKFKNDFR 10
+KKF N F+
Sbjct: 1173 VKKFLNQFK 1181
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 2 LKKFKNDF 9
+K+FKN +
Sbjct: 523 MKQFKNSY 530
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 3 KKFKNDF 9
K F+NDF
Sbjct: 1469 KVFENDF 1475
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LKKFKND 8
+K+FKN+
Sbjct: 3378 MKRFKNE 3384
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LKKFKND 8
+K+FKN+
Sbjct: 3377 MKRFKNE 3383
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LKKFKND 8
+K+FKN+
Sbjct: 3378 MKRFKNE 3384
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 2 LKKFKNDF 9
LKKFKN+
Sbjct: 738 LKKFKNEL 745
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 2 LKKFKNDF 9
LKKFKN+
Sbjct: 738 LKKFKNEL 745
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 2 LKKFKNDF 9
LKKFKN+
Sbjct: 738 LKKFKNEL 745
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DLKKFKNDF 9
DL+ +NDF
Sbjct: 98 DLEHCQNDF 106
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DLKKFKNDF 9
DL+ +NDF
Sbjct: 99 DLEHCQNDF 107
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DLKKFKNDF 9
DL+ +NDF
Sbjct: 99 DLEHCQNDF 107
161|Sequence|801|810|KNDFRLQPSS
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 1 KNDFRLQP 8
+NDFR+QP
Sbjct: 465 QNDFRVQP 472
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 1 KNDFRLQP 8
+NDFR QP
Sbjct: 465 QNDFRAQP 472
>sp|YVAR_VACCC|UNCHARACTERIZED 8.5 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KNDFRLQ 7
KN+FR+Q
Sbjct: 5 KNNFRIQ 11
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 1 KNDFRLQP 8
+ DFR QP
Sbjct: 465 QTDFRAQP 472
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 1 KNDFRLQP 8
+ DFR QP
Sbjct: 465 QTDFRAQP 472
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 1 KNDFRLQP 8
+ DFR QP
Sbjct: 465 QTDFRAQP 472
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 NDFRLQPS 9
++FR+QP+
Sbjct: 316 SNFRVQPT 323
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 1 KNDFRLQPSS 10
+ D +LQP S
Sbjct: 2 EEDLKLQPDS 11
162|Sequence|806|815|LQPSSTSESM
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 LQPSSTSESM 10
LQP+ +E+M
Sbjct: 169 LQPADVAEAM 178
163|Sequence|811|820|TSESMDQLLN
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 SESMDQLLN 10
SES D+L+N
Sbjct: 195 SESEDRLIN 203
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 ESMDQL 8
ESMDQ+
Sbjct: 1568 ESMDQI 1573
>sp|V_PI2HT|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (strain
Query: 1 TSESMDQLLN 10
T+E +D+L++
Sbjct: 8 TTEQVDELIH 17
>sp|V_PI2H|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (HPIV-2)
Query: 1 TSESMDQLLN 10
T+E +D+L++
Sbjct: 8 TTEQVDELIH 17
164|Sequence|816|825|DQLLNKNREG
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 3 LLNKNREG 10
++N+NREG
Sbjct: 189 IVNRNREG 196
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 3 LLNKNREG 10
++N+NREG
Sbjct: 189 IVNRNREG 196
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 LNKNREG 10
LN+N+EG
Sbjct: 229 LNENQEG 235
>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain
Query: 3 LLNKNREG 10
L N N+EG
Sbjct: 426 LFNTNKEG 433
165|Sequence|821|830|KNREGEKSRD
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 KNREGEKSRD 10
K R+G ++RD
Sbjct: 869 KRRDGARTRD 878
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KNREGEKSRD 10
K R+G ++RD
Sbjct: 869 KRRDGARTRD 878
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KNREGEKSRD 10
K R+G ++RD
Sbjct: 869 KRRDGARTRD 878
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 KNREGEKSRD 10
+NR G+K R+
Sbjct: 399 ENRTGQKQRN 408
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 3 REGEKSR 9
REG +SR
Sbjct: 709 REGRRSR 715
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 3 REGEKSR 9
REG +SR
Sbjct: 712 REGRRSR 718
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 4 EGEKSR 9
EGE+SR
Sbjct: 2668 EGERSR 2673
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 4 EGEKSR 9
EGE+SR
Sbjct: 2670 EGERSR 2675
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 4 EGEKSR 9
EGE+SR
Sbjct: 2670 EGERSR 2675
166|Sequence|826|835|EKSRDLIKDK
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 EKSRDLIK 8
EK+R+L+K
Sbjct: 2549 EKARELLK 2556
>sp|UL92_HHV7J|PROTEIN U63|Human herpesvirus 7 (strain JI)
Query: 4 RDLIKD 9
RD+IKD
Sbjct: 126 RDIIKD 131
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 3 SRDLIKD 9
+RDLI+D
Sbjct: 168 ARDLIED 174
>sp|NEF_HV2SB|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 5 DLIKDK 10
DLIKDK
Sbjct: 121 DLIKDK 126
167|Sequence|831|840|LIKDKIEPSA
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 KDKIEPSA 10
K K+EPSA
Sbjct: 1767 KTKLEPSA 1774
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 KDKIEPSA 10
K K+EPSA
Sbjct: 1770 KTKLEPSA 1777
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 KDKIEPSA 10
K K+EPSA
Sbjct: 1770 KTKLEPSA 1777
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 KDKIEPSA 10
K K+EPSA
Sbjct: 1768 KTKLEPSA 1775
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 KDKIEPSA 10
K K+EPSA
Sbjct: 1767 KTKLEPSA 1774
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 KDKIEPSA 10
K K+EPSA
Sbjct: 1768 KTKLEPSA 1775
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 KDKIEPSA 10
K K+EPSA
Sbjct: 1767 KTKLEPSA 1774
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 LIKDKIEPSA 10
L+K+++ PSA
Sbjct: 87 LVKNQVSPSA 96
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 1 LIKDKIEPSA 10
L+K+++ PSA
Sbjct: 87 LVKNQVSPSA 96
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 1 LIKDKIEPSA 10
L+K+++ PSA
Sbjct: 87 LVKNQVSPSA 96
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 IKDKIEP 8
+KDKI P
Sbjct: 10 LKDKINP 16
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 IKDKIEP 8
+KDKI P
Sbjct: 10 LKDKINP 16
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 IKDKIEP 8
+KDKI P
Sbjct: 10 LKDKINP 16
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 IKDKIEPS 9
++DKI PS
Sbjct: 770 VRDKICPS 777
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 IKDKIEPS 9
++DKI PS
Sbjct: 770 VRDKICPS 777
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 IKDKIEPS 9
++DKI PS
Sbjct: 770 VRDKICPS 777
>sp|NSP3_ROTHL|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 1 LIKDKIE 7
L+KDKIE
Sbjct: 142 LMKDKIE 148
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 LIKDKIEPSA 10
+KD++ P+A
Sbjct: 2122 FLKDELRPTA 2131
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 LIKDKIEPSA 10
+KD++ P+A
Sbjct: 2055 FLKDELRPTA 2064
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 LIKDKIEP 8
L+K+ IEP
Sbjct: 1117 LLKNAIEP 1124
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 LIKDKIEP 8
L+K+ IEP
Sbjct: 1117 LLKNAIEP 1124
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 LIKDKIEPSA 10
+KD++ P+A
Sbjct: 2051 FLKDELRPTA 2060
>sp|NSP3_ROTHP|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 LIKDKIE 7
L+KDKIE
Sbjct: 139 LMKDKIE 145
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 KDKIEPS 9
K K+EPS
Sbjct: 1754 KTKLEPS 1760
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 KDKIEPS 9
K K+EPS
Sbjct: 1744 KTKLEPS 1750
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 KDKIEPS 9
K K+EPS
Sbjct: 1744 KTKLEPS 1750
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 KDKIEPS 9
K K+EPS
Sbjct: 1743 KTKLEPS 1749
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 KDKIEPS 9
K K+EPS
Sbjct: 1745 KTKLEPS 1751
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 KDKIEPS 9
K K+EPS
Sbjct: 1753 KTKLEPS 1759
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 KDKIEPS 9
K K+EPS
Sbjct: 1755 KTKLEPS 1761
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 KDKIEPS 9
K K+EPS
Sbjct: 1745 KTKLEPS 1751
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 KDKIEPS 9
K K+EPS
Sbjct: 1742 KTKLEPS 1748
>sp|NSP3_ROTWI|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United
Query: 1 LIKDKIE 7
L+KDKIE
Sbjct: 142 LMKDKIE 148
>sp|NSP3_ROTAM|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 LIKDKIE 7
L+KDKIE
Sbjct: 139 LMKDKIE 145
>sp|NSP3_ROTAD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 LIKDKIE 7
L+KDKIE
Sbjct: 139 LMKDKIE 145
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 KDKIEPS 9
K K+EPS
Sbjct: 1763 KTKLEPS 1769
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 KDKIEPS 9
K K+EPS
Sbjct: 1745 KTKLEPS 1751
>sp|NSP3_ROTHW|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 LIKDKIE 7
L+KDKIE
Sbjct: 142 LMKDKIE 148
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 2 IKDKIEPS 9
++DKI PS
Sbjct: 215 VRDKIIPS 222
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 KDKIEPS 9
K K+EPS
Sbjct: 1753 KTKLEPS 1759
>sp|NSP3_ROTHT|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 LIKDKIE 7
L+KDKIE
Sbjct: 142 LMKDKIE 148
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 IKDKIEPSA 10
+K+KI P+A
Sbjct: 1143 LKEKIVPAA 1151
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 KDKIEPS 9
K K+EPS
Sbjct: 1756 KTKLEPS 1762
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 KDKIEPS 9
K K+EPS
Sbjct: 1761 KTKLEPS 1767
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 KDKIEPS 9
K K+EPS
Sbjct: 1775 KTKLEPS 1781
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 KDKIEPS 9
K K+EPS
Sbjct: 1755 KTKLEPS 1761
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 IKDKIEPSA 10
+K+KI P+A
Sbjct: 1143 LKEKIIPAA 1151
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 IKDKIEPSA 10
+K+KI P+A
Sbjct: 1143 LKEKIIPAA 1151
168|Sequence|836|845|IEPSAKDSFI
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 IEPSAKDSFI 10
+EP DSFI
Sbjct: 662 VEPPFGDSFI 671
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 IEPSAKDSFI 10
+EP DSFI
Sbjct: 661 VEPPFGDSFI 670
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 EPSAKDSF 9
+PS++DSF
Sbjct: 720 KPSSQDSF 727
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 IEPSAKDSFI 10
IEP DS+I
Sbjct: 667 IEPPFGDSYI 676
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 IEPSAKDSFI 10
+EP DS+I
Sbjct: 667 VEPPYGDSYI 676
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 IEPSAKDSFI 10
+EP DS+I
Sbjct: 663 VEPPFGDSYI 672
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 1 IEPSAKDSFI 10
+ PS DS+I
Sbjct: 501 VSPSLVDSYI 510
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 PSAKDSFI 10
PS DSF+
Sbjct: 443 PSTFDSFV 450
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 1 IEPSAKDSFI 10
+ PS DS+I
Sbjct: 494 VSPSLVDSYI 503
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 PSAKDSFI 10
PS DSF+
Sbjct: 443 PSTFDSFV 450
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 PSAKDSFI 10
PS DSF+
Sbjct: 442 PSTFDSFV 449
169|Sequence|841|850|KDSFIENSSS
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 1 KDSFIENSSS 10
KD +ENSS+
Sbjct: 123 KDEDVENSSA 132
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 DSFIENSSS 10
DS+ +NSS+
Sbjct: 3594 DSYFDNSST 3602
>sp|PG082_MONPV|TELOMERE-BINDING protein OPG082|Monkeypox virus (MPXV)
Query: 1 KDSFIENSS 9
KD+F++NS+
Sbjct: 315 KDNFLKNST 323
>sp|PG082_VARV|TELOMERE-BINDING protein OPG082|Variola virus
Query: 1 KDSFIENSS 9
KD+F++NS+
Sbjct: 315 KDNFLKNST 323
>sp|PG082_VAR67|TELOMERE-BINDING protein OPG082|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 KDSFIENSS 9
KD+F++NS+
Sbjct: 315 KDNFLKNST 323
>sp|PG082_VACCC|TELOMERE-BINDING protein OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KDSFIENSS 9
KD+F++NS+
Sbjct: 315 KDNFLKNST 323
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 DSFIENSSS 10
DS+ +NSS+
Sbjct: 3594 DSYFDNSST 3602
>sp|PG055_VARV|PROTEIN OPG055|Variola virus
Query: 1 KDSFIENSS 9
K+S+IEN++
Sbjct: 44 KNSYIENTN 52
>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 KDSFIENSS 9
K+S+IEN++
Sbjct: 44 KNSYIENTN 52
>sp|PG055_VACCP|PROTEIN OPG055|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 KDSFIENSS 9
K+S+IEN++
Sbjct: 44 KNSYIENTN 52
>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KDSFIENSS 9
K+S+IEN++
Sbjct: 44 KNSYIENTN 52
>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)
Query: 1 KDSFIENSS 9
K+S+IEN++
Sbjct: 44 KNSYIENTN 52
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 DSFIENSS 9
D F+ NSS
Sbjct: 1505 DCFVSNSS 1512
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 DSFIENSS 9
D F+ NSS
Sbjct: 1525 DCFVSNSS 1532
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KDSFIENS 8
KD+FIE +
Sbjct: 584 KDTFIERT 591
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KDSFIENS 8
KD+FIE +
Sbjct: 584 KDTFIERT 591
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 DSFIENSS 9
D F+ NSS
Sbjct: 1555 DCFVSNSS 1562
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 DSFIENSS 9
DS+ EN S
Sbjct: 3619 DSYFENDS 3626
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 DSFIENSS 9
D F+ NSS
Sbjct: 1505 DCFVSNSS 1512
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 DSFIENSS 9
D F+ NSS
Sbjct: 1525 DCFVSNSS 1532
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 DSFIENSS 9
D F+ NSS
Sbjct: 1555 DCFVSNSS 1562
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 DSFIENSS 9
DS+ EN S
Sbjct: 3619 DSYFENDS 3626
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 KDSFIENSS 9
KD +ENSS
Sbjct: 123 KDEDVENSS 131
170|Sequence|846|855|ENSSSNCTSG
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 ENSSSNCTSG 10
E+SSS+ T G
Sbjct: 2655 ESSSSSVTEG 2664
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 ENSSSNCTSG 10
E+SSS+ T G
Sbjct: 2655 ESSSSSVTEG 2664
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 ENSSSNCTSG 10
E+SSS+ T G
Sbjct: 2655 ESSSSSVTEG 2664
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 ENSSSNCTSG 10
E+SSS+ T G
Sbjct: 2655 ESSSSSVTEG 2664
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 ENSSSNCTSG 10
E+SSS+ T G
Sbjct: 2655 ESSSSSVTEG 2664
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 ENSSSNCTSG 10
E+SSS+ T G
Sbjct: 2655 ESSSSSVTEG 2664
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 6 NCTSG 10
NCTSG
Sbjct: 911 NCTSG 915
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 6 NCTSG 10
NCTSG
Sbjct: 912 NCTSG 916
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 1 ENSSSNCTSG 10
ENS NC G
Sbjct: 348 ENSLINCQQG 357
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ENSSSNC 7
EN+SS C
Sbjct: 232 ENNSSRC 238
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 NSSSNC 7
NSSS+C
Sbjct: 265 NSSSHC 270
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ENSSSNC 7
EN+SS C
Sbjct: 232 ENNSSRC 238
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 1 ENSSSNCTS 9
+NS+SN +S
Sbjct: 266 DNSASNSSS 274
>sp|W_NIPAV|PROTEIN W|Nipah virus
Query: 1 ENSSSNCTSG 10
ENS NC G
Sbjct: 348 ENSLINCQQG 357
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 NSSSNC 7
NSSS+C
Sbjct: 270 NSSSSC 275
171|Sequence|851|860|NCTSGSSKPN
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 TSGSSKP 9
T+GSSKP
Sbjct: 878 TTGSSKP 884
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 TSGSSKP 9
T+GSSKP
Sbjct: 878 TTGSSKP 884
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 TSGSSKPN 10
T+G +KPN
Sbjct: 880 TTGQTKPN 887
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 1 NCTSGSSKP 9
NC GSS P
Sbjct: 283 NCGGGSSTP 291
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 TSGSSKPN 10
T+GS+KP+
Sbjct: 879 TTGSTKPD 886
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 TSGSSKPN 10
T+GS+KP+
Sbjct: 879 TTGSTKPD 886
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 TSGSSKP 9
T+GS+KP
Sbjct: 878 TTGSTKP 884
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 TSGSSKP 9
T+GS+KP
Sbjct: 878 TTGSTKP 884
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 TSGSSKP 9
T+GS+KP
Sbjct: 878 TTGSTKP 884
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 NCTSGSSKPN 10
NC + +S+P
Sbjct: 55 NCVASTSQPE 64
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 TSGSSKPN 10
T+G++KP+
Sbjct: 876 TTGTTKPH 883
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 2 CTSGSSKPN 10
C SGS++ N
Sbjct: 93 CGSGSTQNN 101
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 CTSGSSKP 9
CTS +KP
Sbjct: 421 CTSEYAKP 428
172|Sequence|856|865|SSKPNSPSIS
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 PNSPSIS 10
PN+PSI+
Sbjct: 465 PNAPSIT 471
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 PNSPSIS 10
PN+PSI+
Sbjct: 465 PNAPSIT 471
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 PNSPSIS 10
PN+PSI+
Sbjct: 465 PNAPSIT 471
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 4 PNSPSIS 10
PN+PSI+
Sbjct: 393 PNAPSIT 399
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 PNSPSIS 10
PN+PSI+
Sbjct: 465 PNAPSIT 471
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 PNSPSIS 10
PNSP+I+
Sbjct: 464 PNSPAIT 470
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 PNSPSIS 10
PN+PSI+
Sbjct: 465 PNAPSIT 471
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 PNSPSIS 10
PN+PSI+
Sbjct: 465 PNAPSIT 471
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 PNSPSIS 10
PN+PSI+
Sbjct: 465 PNAPSIT 471
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 PNSPSIS 10
PN+PSI+
Sbjct: 465 PNAPSIT 471
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SSKPNSPSI 9
SS+P SP +
Sbjct: 928 SSEPTSPRV 936
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 PNSPSIS 10
PN+P+I+
Sbjct: 463 PNAPAIT 469
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 SSKPNSPSIS 10
+S PNSP+ S
Sbjct: 669 ASPPNSPASS 678
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SSKPNSP 7
SS+P SP
Sbjct: 928 SSEPTSP 934
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 1 SSKPNSP 7
SS+PN+P
Sbjct: 115 SSQPNNP 121
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 3 KPNSPSI 9
+PN PS+
Sbjct: 774 EPNGPSV 780
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 SSKPNSPS 8
+S PNSPS
Sbjct: 127 TSLPNSPS 134
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 3 KPNSPSI 9
+PN PS+
Sbjct: 774 EPNGPSV 780
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 3 KPNSPSIS 10
KP +P IS
Sbjct: 1227 KPETPQIS 1234
173|Sequence|861|870|SPSISPSILS
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 2 PSISPSILS 10
PS SPS+ +
Sbjct: 340 PSFSPSLFN 348
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 SPSISPSILS 10
SP +PS+LS
Sbjct: 97 SPDGTPSVLS 106
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 SPSISPSILS 10
SP +PS+LS
Sbjct: 97 SPDGTPSVLS 106
>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SPSISPSIL 9
+PSI PS++
Sbjct: 506 NPSILPSLI 514
>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)
Query: 1 SPSISPSIL 9
+PSI PS++
Sbjct: 506 NPSILPSLI 514
>sp|PG068_VARV|PROTEIN OPG068|Variola virus
Query: 1 SPSISPSILS 10
+PS+ PS+++
Sbjct: 506 NPSVLPSLIN 515
>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SPSISPSILS 10
+PS+ PS+++
Sbjct: 506 NPSVLPSLIN 515
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 SPSISPSILS 10
S ++SP +LS
Sbjct: 2004 SGAVSPCVLS 2013
174|Sequence|866|875|PSILSNTEHK
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PSILSNTE 8
P ILSN+E
Sbjct: 42 PQILSNSE 49
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 PSILSNTE 8
P ILSN+E
Sbjct: 42 PQILSNSE 49
>sp|RP30_VACCC|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PSILSNTEHK 10
PSI +N E+K
Sbjct: 92 PSIATNLEYK 101
>sp|RP30_VACCA|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PSILSNTEHK 10
PSI +N E+K
Sbjct: 92 PSIATNLEYK 101
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 LSNTEHK 10
LSN EHK
Sbjct: 1111 LSNFEHK 1117
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 LSNTEHK 10
LSN EHK
Sbjct: 1111 LSNFEHK 1117
>sp|U15_HHV6Z|PROTEIN U15|Human herpesvirus 6B (strain Z29)
Query: 2 SILSNTE 8
+ILSNTE
Sbjct: 26 NILSNTE 32
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 PSILSN 6
PSILSN
Sbjct: 642 PSILSN 647
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 1 PSILSN 6
PSILSN
Sbjct: 639 PSILSN 644
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PSILSNTEHK 10
PS LSN E +
Sbjct: 500 PSFLSNCEKQ 509
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 1 PSILSNTEHK 10
PS LSN E +
Sbjct: 500 PSFLSNCEKQ 509
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 1 PSILSNTEHK 10
PS LSN E +
Sbjct: 500 PSFLSNCEKQ 509
>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)
Query: 1 PSILSNTEHK 10
PS+++ T+HK
Sbjct: 407 PSMIAITKHK 416
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PSILSNTEHK 10
PSI+SN + +
Sbjct: 1357 PSIISNEKQE 1366
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 PSILSNTEHK 10
PSI+SN + +
Sbjct: 1357 PSIISNEKQE 1366
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 PSILSNTEH 9
P+I NT+H
Sbjct: 1021 PTISINTKH 1029
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 1 PSILSNTEH 9
PSI +T H
Sbjct: 184 PSIFCSTNH 192
175|Sequence|871|880|NTEHKRGPEV
>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)
Query: 1 NTEHKRGPEV 10
+T H+R P V
Sbjct: 244 STHHQRSPRV 253
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 NTEHKRGPE 9
+++H GPE
Sbjct: 2371 SSQHDSGPE 2379
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 TEH--KRGPEV 10
+EH KRGP V
Sbjct: 1081 SEHCGKRGPSV 1091
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 5 KRGPEV 10
KRGP V
Sbjct: 1015 KRGPSV 1020
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 HKRGPE 9
H RGP+
Sbjct: 711 HPRGPD 716
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 5 KRGPEV 10
KRGP++
Sbjct: 1693 KRGPDI 1698
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 5 KRGPEV 10
KRGP V
Sbjct: 1087 KRGPSV 1092
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 5 KRGPEV 10
KRGP V
Sbjct: 1087 KRGPSV 1092
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 5 KRGPEV 10
KRGP V
Sbjct: 1087 KRGPSV 1092
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 5 KRGPEV 10
KRGP V
Sbjct: 1087 KRGPSV 1092
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 5 KRGPEV 10
KRGP V
Sbjct: 1087 KRGPSV 1092
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 5 KRGPEV 10
KRGP V
Sbjct: 1087 KRGPSV 1092
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 EHKRGP 8
+H++GP
Sbjct: 2767 DHRKGP 2772
176|Sequence|876|885|RGPEVTSQGV
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 RGPEVTSQG 9
RGPE +QG
Sbjct: 473 RGPEPGAQG 481
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 RGPEVTSQGV 10
R P+V S+G+
Sbjct: 2987 RFPDVISEGI 2996
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 RGPEVTSQGV 10
R P+V S+G+
Sbjct: 3007 RFPDVISEGI 3016
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 RGPEVTSQGV 10
R P+V S+G+
Sbjct: 3037 RFPDVISEGI 3046
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 RGPEVTSQGV 10
R P+V S+G+
Sbjct: 2987 RFPDVISEGI 2996
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 RGPEVTSQGV 10
R P+V S+G+
Sbjct: 3007 RFPDVISEGI 3016
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 RGPEVTSQGV 10
R P+V S+G+
Sbjct: 3037 RFPDVISEGI 3046
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 PEVTSQG 9
PEV +QG
Sbjct: 2675 PEVIAQG 2681
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 PEVTSQG 9
PEV +QG
Sbjct: 2675 PEVIAQG 2681
>sp|GLYC_HRSV3|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 1 RGPEVTSQ 8
R PE+TSQ
Sbjct: 254 RNPELTSQ 261
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 PEVTSQG 9
PE+TS+G
Sbjct: 1420 PELTSEG 1426
>sp|GLYC_HRSV2|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 1 RGPEVTSQ 8
R PE+TSQ
Sbjct: 254 RNPELTSQ 261
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 2 GPEVTSQGV 10
GP T QG+
Sbjct: 410 GPAKTYQGI 418
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GPEVTSQGV 10
GP TSQ V
Sbjct: 1287 GPNFTSQEV 1295
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GPEVTSQGV 10
GP TSQ V
Sbjct: 1288 GPNFTSQEV 1296
>sp|VEGFH_ORFN2|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ2) (OV
Query: 3 PEVTSQ 8
PE+TSQ
Sbjct: 50 PELTSQ 55
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 3 PEVTSQGV 10
PEVTS+ V
Sbjct: 13 PEVTSRYV 20
177|Sequence|881|890|TSQGVQTSSP
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 4 GVQTSSP 10
GVQT SP
Sbjct: 1141 GVQTGSP 1147
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 3 QGVQTSSP 10
QG+Q S+P
Sbjct: 1054 QGLQASAP 1061
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 TSQGVQTSSP 10
+S G+Q S+P
Sbjct: 1051 SSTGLQASAP 1060
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 TSQGVQTSSP 10
+S G+Q S+P
Sbjct: 1050 SSTGLQASAP 1059
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 TSQGVQTSSP 10
+S G+Q S+P
Sbjct: 1050 SSTGLQASAP 1059
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 1 TSQGVQTSS 9
T+QGVQ S
Sbjct: 155 TNQGVQVGS 163
>sp|HBSAG_HBVH1|LARGE envelope protein|Hepatitis B virus genotype H
Query: 2 SQGVQTSSP 10
+QG+ T+SP
Sbjct: 81 AQGILTTSP 89
>sp|HBSAG_HBVH3|LARGE envelope protein|Hepatitis B virus genotype H
Query: 2 SQGVQTSSP 10
+QG+ T+SP
Sbjct: 81 AQGILTTSP 89
>sp|HBSAG_HBVH2|LARGE envelope protein|Hepatitis B virus genotype H
Query: 2 SQGVQTSSP 10
+QG+ T+SP
Sbjct: 81 AQGILTTSP 89
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 TSQGVQTS 8
T+QGV+ S
Sbjct: 958 TAQGVENS 965
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 5 VQTSSP 10
+QTSSP
Sbjct: 805 IQTSSP 810
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 5 VQTSSP 10
+QTSSP
Sbjct: 803 IQTSSP 808
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 5 VQTSSP 10
+QTSSP
Sbjct: 803 IQTSSP 808
178|Sequence|886|895|QTSSPACKQE
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 QTSSPACKQ 9
Q S+P CKQ
Sbjct: 323 QNSNPDCKQ 331
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 QTSSPACKQ 9
Q S+P CKQ
Sbjct: 323 QNSNPDCKQ 331
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 QTSSPACKQE 10
QT+ P C+++
Sbjct: 34 QTAPPPCRRQ 43
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 QTSSPACKQE 10
QT+ P C+++
Sbjct: 34 QTAPPPCRRQ 43
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 5 PACKQE 10
PAC+QE
Sbjct: 242 PACEQE 247
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 QTSSPACKQ 9
+T+SP C++
Sbjct: 455 RTNSPTCRK 463
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 TSSPACKQ 9
TS P C Q
Sbjct: 667 TSQPVCWQ 674
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 QTSSPACK 8
Q S+P CK
Sbjct: 320 QNSNPDCK 327
>sp|PG062_VACCT|PHOSPHOPROTEIN OPG062|Vaccinia virus (strain Tian Tan)
Query: 3 SSPACKQE 10
SSPAC++
Sbjct: 52 SSPACERR 59
>sp|PG062_VACCC|PHOSPHOPROTEIN OPG062|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 SSPACKQE 10
SSPAC++
Sbjct: 52 SSPACERR 59
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 QTSSPACK 8
Q S+P CK
Sbjct: 320 QNSNPDCK 327
179|Sequence|891|900|ACKQEKDDKE
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 KQEKDDKE 10
K+E+DD+E
Sbjct: 2261 KEEEDDRE 2268
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 CKQEKDDK 9
CKQ + DK
Sbjct: 547 CKQPRSDK 554
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 CKQEKDDKE 10
CK ++DD E
Sbjct: 1236 CKFDEDDSE 1244
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 KQEKDDKE 10
+QEK++KE
Sbjct: 642 QQEKNEKE 649
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 KQEKDDKE 10
+QEK++KE
Sbjct: 654 QQEKNEKE 661
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 KQEKDDKE 10
+QEK++KE
Sbjct: 649 QQEKNEKE 656
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 KQEKDDKE 10
+QEK++KE
Sbjct: 648 QQEKNEKE 655
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 KQEKDDKE 10
+QEK++KE
Sbjct: 649 QQEKNEKE 656
>sp|UL56_HHV2H|PROTEIN UL56|Human herpesvirus 2 (strain HG52)
Query: 1 ACKQEKDD 8
AC+ + DD
Sbjct: 10 ACRDDGDD 17
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 3 KQEKDD 8
KQE+DD
Sbjct: 270 KQEEDD 275
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 KQEKDDKE 10
KQE+ DKE
Sbjct: 476 KQEQKDKE 483
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 4 QEKDDKE 10
QEKDD++
Sbjct: 21 QEKDDEK 27
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 KQEKDDKE 10
KQEK DKE
Sbjct: 476 KQEKIDKE 483
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 2 CKQEKDDK 9
CK+ + DK
Sbjct: 549 CKKPRSDK 556
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 2 CKQEKDDK 9
CK+ + DK
Sbjct: 546 CKKPRSDK 553
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 KQEKDDKE 10
KQE+ DKE
Sbjct: 473 KQEQKDKE 480
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 KQEKDDKE 10
KQE+ DKE
Sbjct: 480 KQEQKDKE 487
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 KQEKDDKE 10
KQE+ DKE
Sbjct: 475 KQEQKDKE 482
180|Sequence|896|905|KDDKEEKKDA
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 DKEEKKDA 10
DK+EKK A
Sbjct: 156 DKKEKKQA 163
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 3 DKEEKKDA 10
DK+EKK++
Sbjct: 87 DKQEKKES 94
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 2 DDKEEKKD 9
DDK +K+D
Sbjct: 87 DDKSDKRD 94
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 2 DDKEEKKD 9
DDK +K+D
Sbjct: 87 DDKSDKRD 94
>sp|BARF1_EBVG|SECRETED protein BARF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 KDDKEE 6
K+DKEE
Sbjct: 204 KNDKEE 209
>sp|BARF1_EBVB9|SECRETED protein BARF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 KDDKEE 6
K+DKEE
Sbjct: 204 KNDKEE 209
>sp|BARF1_EBVA8|SECRETED protein BARF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 KDDKEE 6
K+DKEE
Sbjct: 204 KNDKEE 209
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 DKEEKKDA 10
DK+E+K A
Sbjct: 163 DKKEQKQA 170
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 KDDKEEKKD 9
+D+K++ KD
Sbjct: 173 RDEKKQYKD 181
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 KDDKEEKKD 9
K+ KEE KD
Sbjct: 187 KEKKEELKD 195
181|Sequence|901|910|EKKDAAEQVR
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 EKKDAAEQVR 10
E KDAA QVR
Sbjct: 132 EGKDAATQVR 141
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 EKKDAAEQVR 10
E KDAA QVR
Sbjct: 132 EGKDAATQVR 141
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 EKKDAAEQVR 10
E KDAA QVR
Sbjct: 132 EGKDAATQVR 141
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 EKKDAAEQVR 10
E KDAA QVR
Sbjct: 132 EGKDAATQVR 141
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 1 EKKDAAEQVR 10
E +DAA QVR
Sbjct: 132 EGRDAATQVR 141
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 EKKDAAEQVR 10
E +DAA QVR
Sbjct: 132 EGRDAATQVR 141
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 EKKDAAEQVR 10
E +DAA QVR
Sbjct: 132 EGRDAATQVR 141
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 EKKDAAEQVR 10
E +DAA QVR
Sbjct: 132 EGRDAATQVR 141
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 KDAAEQVR 10
+DAA QVR
Sbjct: 132 RDAASQVR 139
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin)
Query: 1 EKKDAAEQVR 10
E +DA QVR
Sbjct: 73 ETEDAVTQVR 82
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169)
Query: 1 EKKDAAEQVR 10
E +DA QVR
Sbjct: 73 ETEDAVTQVR 82
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 4 DAAEQVR 10
DAAEQ++
Sbjct: 199 DAAEQIK 205
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 KKDAAEQVR 10
KK+ +EQ+R
Sbjct: 294 KKNLSEQLR 302
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 KKDAAEQVR 10
KK+ +EQ+R
Sbjct: 294 KKNLSEQLR 302
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 KKDAAEQVR 10
KK+ +EQ+R
Sbjct: 294 KKNLSEQLR 302
182|Sequence|906|915|AEQVRKSTLN
***** No hits found ******
183|Sequence|911|920|KSTLNPNAKE
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 2 STLNPNAK 9
+TLNPN++
Sbjct: 348 TTLNPNSQ 355
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 STLNPNA 8
STL PNA
Sbjct: 2630 STLQPNA 2636
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 STLNPNA 8
STL PNA
Sbjct: 2630 STLQPNA 2636
>sp|GLYC_HRSV1|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 2 STLNPN 7
STLNPN
Sbjct: 287 STLNPN 292
>sp|UL147_HCMVM|PUTATIVE viral CXC chemokine 2|Human cytomegalovirus (strain Merlin)
Query: 4 LNPNAK 9
LNPNA+
Sbjct: 94 LNPNAQ 99
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 STLNPNA 8
STLN NA
Sbjct: 444 STLNTNA 450
>sp|UL147_HCMVT|PUTATIVE viral CXC chemokine 2|Human cytomegalovirus (strain Towne)
Query: 4 LNPNAK 9
LNPNA+
Sbjct: 94 LNPNAQ 99
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 STLNPNA 8
STLN NA
Sbjct: 444 STLNTNA 450
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 6 PNAKE 10
PNAKE
Sbjct: 1337 PNAKE 1341
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 KSTLNPNAKE 10
+ST+NP A +
Sbjct: 1237 RSTVNPWASQ 1246
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 KSTLNPNAKE 10
+ST+NP A +
Sbjct: 1237 RSTVNPWASQ 1246
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 KSTLNPNAKE 10
+ST+NP A +
Sbjct: 1237 RSTVNPWASQ 1246
184|Sequence|916|925|PNAKEFNPRS
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 NAKEFNPRS 10
N +EF PRS
Sbjct: 6651 NLQEFKPRS 6659
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 1 PNAKEFNPR 9
P KE NPR
Sbjct: 371 PTRKEINPR 379
>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)
Query: 1 PNAKEFNP 8
P+A EFNP
Sbjct: 356 PSALEFNP 363
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PNAKEFNPR 9
PN+K NP+
Sbjct: 831 PNSKSPNPQ 839
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PNAKEFNPR 9
PN+K NP+
Sbjct: 831 PNSKSPNPQ 839
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 4 KEFNPRS 10
K+FNP S
Sbjct: 216 KQFNPES 222
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 4 KEFNPRS 10
K+FNP S
Sbjct: 216 KQFNPES 222
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 4 KEFNPRS 10
K+FNP S
Sbjct: 216 KQFNPES 222
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 4 KEFNPRS 10
K+FNP S
Sbjct: 216 KQFNPES 222
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 PNAKEFNP 8
PN +++NP
Sbjct: 195 PNYEQYNP 202
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 1 PNAKEFNPRS 10
P+A+ +NP +
Sbjct: 86 PDARIYNPEA 95
185|Sequence|921|930|FNPRSFSQPK
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 NPRSFSQP 9
N RSFS+P
Sbjct: 1358 NRRSFSEP 1365
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 FNP---RSFSQP 9
FNP R+FSQP
Sbjct: 3 FNPPVIRAFSQP 14
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 4 RSFSQP 9
RSFS+P
Sbjct: 1358 RSFSEP 1363
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 RSFSQP 9
RSFS+P
Sbjct: 1358 RSFSEP 1363
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 4 RSFSQP 9
RSFS+P
Sbjct: 1358 RSFSEP 1363
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 4 RSFSQP 9
RSFS+P
Sbjct: 1358 RSFSEP 1363
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 4 RSFSQP 9
RSFS+P
Sbjct: 1358 RSFSEP 1363
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 RSFSQP 9
RSFS+P
Sbjct: 1358 RSFSEP 1363
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 NPRSFSQPK 10
NP F QPK
Sbjct: 720 NPSVFFQPK 728
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 FNPRSFSQP 9
F P S SQP
Sbjct: 432 FAPTSGSQP 440
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 FNPRSFSQPK 10
FNP + S P+
Sbjct: 1230 FNPVTISDPR 1239
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 4 RSFSQP 9
R+FSQP
Sbjct: 9 RAFSQP 14
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 NPRSFSQ 8
NPR F+Q
Sbjct: 276 NPRVFAQ 282
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 2 NPRSFSQPK 10
NPR QP+
Sbjct: 206 NPRYLLQPE 214
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 FNPRSFSQPK 10
+ P+S QP+
Sbjct: 230 YKPQSLCQPE 239
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 3 PRSFSQP 9
P +FSQP
Sbjct: 428 PETFSQP 434
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 4 RSFSQP 9
R+FSQP
Sbjct: 9 RAFSQP 14
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 3 PRSFSQP 9
P +FSQP
Sbjct: 428 PETFSQP 434
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 RSFSQPK 10
R+FS PK
Sbjct: 2004 RAFSSPK 2010
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 RSFSQPK 10
R+FS PK
Sbjct: 1998 RAFSSPK 2004
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 RSFSQPK 10
R+FS PK
Sbjct: 1990 RAFSSPK 1996
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 RSFSQPK 10
R+FS PK
Sbjct: 1998 RAFSSPK 2004
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 FNPRSFS 7
+NP+S+S
Sbjct: 1231 YNPKSYS 1237
>sp|PG082_MONPV|TELOMERE-BINDING protein OPG082|Monkeypox virus (MPXV)
Query: 1 FNPRSFSQPK 10
F+ SF+ PK
Sbjct: 252 FDESSFTTPK 261
186|Sequence|926|935|FSQPKPSTTP
>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SQPKPSTTP 10
S PK STTP
Sbjct: 192 SNPKESTTP 200
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 QPKPSTTP 10
+P+PS TP
Sbjct: 351 RPRPSRTP 358
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 QPKPSTTP 10
+P+PS TP
Sbjct: 351 RPRPSRTP 358
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 QPKPSTTP 10
+P+PS TP
Sbjct: 351 RPRPSRTP 358
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 3 QPKPSTTP 10
QPKPS +P
Sbjct: 229 QPKPSPSP 236
>sp|GL_HHV1K|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain KOS)
Query: 3 QPKPSTTP 10
QPKP TTP
Sbjct: 188 QPKPLTTP 195
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 FSQPKPSTTP 10
F PK + TP
Sbjct: 729 FVNPKEAITP 738
>sp|GL_HHV11|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain 17)
Query: 3 QPKPSTTP 10
QPKP TTP
Sbjct: 188 QPKPLTTP 195
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QPKPST 8
QPKP T
Sbjct: 2852 QPKPGT 2857
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QPKPST 8
QPKP T
Sbjct: 2852 QPKPGT 2857
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QPKPST 8
QPKP T
Sbjct: 2852 QPKPGT 2857
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QPKPST 8
QPKP T
Sbjct: 2852 QPKPGT 2857
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 SQPKPSTT 9
++PKPST+
Sbjct: 121 NEPKPSTS 128
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PKPSTTP 10
PK STTP
Sbjct: 191 PKKSTTP 197
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 3 QPKPSTTP 10
P+PST+P
Sbjct: 451 HPEPSTSP 458
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 1 FSQPKPSTTP 10
S+P+ STTP
Sbjct: 327 LSRPQYSTTP 336
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 SQPKPSTTP 10
+ P+PS TP
Sbjct: 269 AAPEPSPTP 277
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 FSQPKPSTTP 10
FS +PS+TP
Sbjct: 530 FSVDQPSSTP 539
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 FSQPKPST 8
F +PKPS
Sbjct: 1414 FIEPKPSV 1421
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 FSQPKPST 8
F +PKPS
Sbjct: 1415 FIEPKPSV 1422
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 SQPKPSTTP 10
S P PS+TP
Sbjct: 246 SVPSPSSTP 254
187|Sequence|931|940|PSTTPTSPRP
>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)
Query: 1 PSTTPTSPRP 10
P+ +PT+PRP
Sbjct: 223 PTASPTAPRP 232
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 2 STTPTSPRP 10
S+TP++P P
Sbjct: 142 SSTPSAPGP 150
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 STTPTSPR 9
S+ PTSPR
Sbjct: 928 SSEPTSPR 935
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 STTPTSPR 9
S+ PTSPR
Sbjct: 928 SSEPTSPR 935
>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 PSTTPTSPR 9
P+TTP + R
Sbjct: 275 PTTTPQTER 283
>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 PSTTPTSPR 9
P+TTP + R
Sbjct: 275 PTTTPQTER 283
>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 1 PSTTPTSPR 9
P+TTP + R
Sbjct: 275 PTTTPQTER 283
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 3 TTPTSP 8
TTPT+P
Sbjct: 199 TTPTAP 204
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 1 PSTTPTS 7
PST PT+
Sbjct: 492 PSTNPTN 498
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 STTPTSPRP 10
+ PT+P P
Sbjct: 72 ACVPTNPNP 80
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 STTPTSPRP 10
+T PT+PRP
Sbjct: 672 ATQPTTPRP 680
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 STTPTSPRP 10
+ PT+P P
Sbjct: 74 ACVPTNPNP 82
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 4 TPTSPR 9
TP SPR
Sbjct: 456 TPNSPR 461
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 4 TPTSPR 9
TP SPR
Sbjct: 460 TPNSPR 465
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 4 TPTSPR 9
TP SPR
Sbjct: 460 TPNSPR 465
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 STTPTSPRP 10
+T PT PRP
Sbjct: 637 ATQPTMPRP 645
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 TPTSPRP 10
TP +P P
Sbjct: 436 TPVAPNP 442
>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 STTPTSPRP 10
ST P PRP
Sbjct: 99 STQPQEPRP 107
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 4 TPTSPRP 10
TP +P P
Sbjct: 436 TPVAPNP 442
188|Sequence|936|945|TSPRPQAQPS
>sp|OX2V_HHV6Z|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6B (strain
Query: 3 PRPQAQPS 10
PRP+ PS
Sbjct: 22 PRPETSPS 29
>sp|PG079_VARV|PROTEIN OPG079|Variola virus
Query: 1 TSPRPQA 7
TSPRP A
Sbjct: 11 TSPRPTA 17
>sp|PG079_VAR67|PROTEIN OPG079|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 TSPRPQA 7
TSPRP A
Sbjct: 11 TSPRPTA 17
>sp|PG079_VACCC|PROTEIN OPG079|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TSPRPQA 7
TSPRP A
Sbjct: 11 TSPRPTA 17
>sp|PG079_MONPV|PROTEIN OPG079|Monkeypox virus (MPXV)
Query: 1 TSPRPQA 7
TSPRP A
Sbjct: 11 TSPRPTA 17
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 4 RPQAQPS 10
RP+ QPS
Sbjct: 44 RPRLQPS 50
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 RPQAQPS 10
RP+ QPS
Sbjct: 44 RPRLQPS 50
>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PRPQAQPS 10
P+P+ QP+
Sbjct: 44 PKPRLQPN 51
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 TSPRPQAQ 8
+SP PQAQ
Sbjct: 248 SSPDPQAQ 255
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 TSPRPQAQ 8
+PRPQ Q
Sbjct: 160 VNPRPQKQ 167
>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)
Query: 1 TSPRPQAQPS 10
SPRP++ P+
Sbjct: 358 VSPRPRSGPT 367
>sp|GI_HHV23|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain 333)
Query: 1 TSPRPQAQPS 10
SPRP++ P+
Sbjct: 358 VSPRPRSGPT 367
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 TSPRPQAQP 9
T+PRP+ P
Sbjct: 116 TAPRPELGP 124
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 1 TSPRPQAQP 9
T+PRP+ P
Sbjct: 116 TAPRPELGP 124
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 2 SPRPQAQ 8
+PRPQ Q
Sbjct: 161 APRPQKQ 167
189|Sequence|941|950|QAQPSPSMVG
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 AQPSPSMV 9
A+PSP MV
Sbjct: 1037 ARPSPGMV 1044
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 3 QPSPSMV 9
QP+P+MV
Sbjct: 28 QPTPTMV 34
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 3 QPSPSMV 9
QP+P+MV
Sbjct: 28 QPTPTMV 34
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 QAQPSPSM 8
QAQP PS+
Sbjct: 1352 QAQPLPSI 1359
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 PSPSMVG 10
PSP+M G
Sbjct: 1086 PSPNMYG 1092
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 PSPSMVG 10
PSP+M G
Sbjct: 1086 PSPNMYG 1092
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 PSPSMVG 10
PSP+M G
Sbjct: 1086 PSPNMYG 1092
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 PSPSMVG 10
PSP+M G
Sbjct: 1086 PSPNMYG 1092
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 AQPSPSMVG 10
AQPS +VG
Sbjct: 549 AQPSDRVVG 557
190|Sequence|946|955|PSMVGHQQPT
>sp|VU51_HHV7J|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 7 (strain JI)
Query: 1 PSMVGHQQPT 10
PS+ QQPT
Sbjct: 280 PSLRKLQQPT 289
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 4 VGHQQPT 10
VGHQ+P+
Sbjct: 1208 VGHQRPS 1214
>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)
Query: 1 PSMVGH 6
PS++GH
Sbjct: 149 PSLLGH 154
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 VGHQQPT 10
+GHQ+P+
Sbjct: 1210 IGHQRPS 1216
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 VGHQQPT 10
+GHQ+P+
Sbjct: 1210 IGHQRPS 1216
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 2 SMVGHQQP 9
S+VG Q P
Sbjct: 458 SLVGKQSP 465
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 VGHQQPT 10
+GHQ+P+
Sbjct: 1210 IGHQRPS 1216
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 VGHQQPT 10
+GHQ+P+
Sbjct: 1210 IGHQRPS 1216
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 2 SMVGHQQP 9
S+VG Q P
Sbjct: 458 SLVGKQSP 465
>sp|NS1_I82A8|NON-STRUCTURAL protein 1|Influenza A virus (strain
Query: 1 PSMVGH 6
PSM GH
Sbjct: 164 PSMPGH 169
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 VGHQQPT 10
+GHQ+P+
Sbjct: 1210 IGHQRPS 1216
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 GHQQP 9
GH+QP
Sbjct: 496 GHEQP 500
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 5 GHQQP 9
GHQQP
Sbjct: 723 GHQQP 727
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 4 VGHQQPT 10
+ HQ PT
Sbjct: 507 ISHQNPT 513
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 MVGHQ 7
M+GHQ
Sbjct: 204 MIGHQ 208
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 2 SMVGHQQP 9
S V H+QP
Sbjct: 452 STVSHKQP 459
>sp|NCAP_INBAA|NUCLEOPROTEIN B virus (strain B/Ann
Query: 3 MVGHQQ 8
M+GH Q
Sbjct: 198 MIGHSQ 203
191|Sequence|951|960|HQQPTPVYTQ
>sp|US25_HCMVA|UNCHARACTERIZED protein US25|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HQQPTPVYT 9
H P PVYT
Sbjct: 96 HPAPAPVYT 104
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PTPVYT 9
PTPV+T
Sbjct: 706 PTPVFT 711
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2600 HEEPVPMST 2608
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2600 HEEPVPMST 2608
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2600 HEEPVPMST 2608
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2603 HEEPIPMAT 2611
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2601 HEEPIPMST 2609
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2600 HEEPVPMST 2608
Query: 2 QQPTPVYT 9
Q+PTP T
Sbjct: 3070 QRPTPTGT 3077
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2600 HEEPVPMST 2608
Query: 2 QQPTPVYT 9
Q+PTP T
Sbjct: 3070 QRPTPTGT 3077
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2602 HEEPIPMAT 2610
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2603 HEEPIPMAT 2611
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2601 HEEPIPMST 2609
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2598 HEEPIPMST 2606
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2601 HEEPIPMST 2609
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2601 HEEPIPMST 2609
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2601 HEEPIPMST 2609
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2601 HEEPIPMST 2609
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2597 HEEPIPMAT 2605
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2597 HEEPIPMAT 2605
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2597 HEEPIPMAT 2605
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2597 HEEPIPMAT 2605
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HQQPTPVYT 9
H++P P YT
Sbjct: 266 HEKPLPNYT 274
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HQQPTPVYT 9
H++P P+ T
Sbjct: 2597 HEEPIPMAT 2605
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HQQPTPVYT 9
H++P+P+ T
Sbjct: 475 HKEPSPLIT 483
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HQQPTPVYT 9
H++P+P+ T
Sbjct: 475 HKEPSPLIT 483
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 2 QQPTPVYT 9
Q+P P YT
Sbjct: 914 QRPAPFYT 921
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HQQPTPVYT 9
H++P+P+ T
Sbjct: 475 HKEPSPLIT 483
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 1 HQQPTPV 7
HQ+P P+
Sbjct: 354 HQKPPPL 360
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 4 PTPVYTQ 10
P PV+TQ
Sbjct: 54 PRPVFTQ 60
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 4 PTPVYTQ 10
P PV+TQ
Sbjct: 54 PRPVFTQ 60
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 PTPVYTQ 10
P PV+TQ
Sbjct: 54 PRPVFTQ 60
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 4 PTPVYTQ 10
P PV+TQ
Sbjct: 54 PRPVFTQ 60
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 4 PTPVYTQ 10
P PV+TQ
Sbjct: 54 PRPVFTQ 60
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 4 PTPVYTQ 10
P PV+TQ
Sbjct: 54 PRPVFTQ 60
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 4 PTPVYTQ 10
P PV+TQ
Sbjct: 54 PRPVFTQ 60
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 4 PTPVYTQ 10
P PV+TQ
Sbjct: 54 PRPVFTQ 60
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 4 PTPVYTQ 10
P PV+TQ
Sbjct: 54 PRPVFTQ 60
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 1 HQQPTPVYT 9
+QQ P+YT
Sbjct: 57 NQQVKPLYT 65
>sp|PHOSP_VSNJM|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 3 QPTPVYTQ 10
+PTP Y Q
Sbjct: 47 KPTPSYYQ 54
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HQQPTPVYT 9
H+QP VY+
Sbjct: 497 HEQPEYVYS 505
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HQQPTPVYT 9
+QQ P+YT
Sbjct: 57 NQQVKPLYT 65
>sp|PHOSP_VSNJO|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 3 QPTPVYTQ 10
+PTP Y Q
Sbjct: 47 KPTPSYYQ 54
>sp|UL63_HCMVA|UNCHARACTERIZED protein UL63|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HQQPTPVYTQ 10
H++P +YT
Sbjct: 6 HERPIALYTN 15
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 4 PTPVYT 9
P+PV+T
Sbjct: 843 PSPVFT 848
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 4 PTPVYTQ 10
P P+YTQ
Sbjct: 559 PPPLYTQ 565
192|Sequence|956|965|PVYTQPVCFA
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 TQPVCF 9
+QPVC+
Sbjct: 668 SQPVCW 673
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 5 QPVCF 9
+PVCF
Sbjct: 950 RPVCF 954
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 QPVCF 9
+PVCF
Sbjct: 950 RPVCF 954
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 5 QPVCF 9
+PVCF
Sbjct: 950 RPVCF 954
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 5 QPVCF 9
+PVCF
Sbjct: 950 RPVCF 954
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 5 QPVCF 9
+PVCF
Sbjct: 950 RPVCF 954
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 5 QPVCF 9
+PVCF
Sbjct: 950 RPVCF 954
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 5 QPVCF 9
+PVCF
Sbjct: 950 RPVCF 954
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 5 QPVCF 9
+PVCF
Sbjct: 950 RPVCF 954
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 5 QPVCF 9
+PVCF
Sbjct: 942 RPVCF 946
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 PVYTQPVCF 9
PVY +CF
Sbjct: 913 PVYRVKLCF 921
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 1 PVYTQPVCFA 10
PV+T CF+
Sbjct: 404 PVWTARFCFS 413
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 PVYTQPVCF 9
PVY +CF
Sbjct: 913 PVYRVKLCF 921
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTQPV 7
+YT+PV
Sbjct: 1259 IYTKPV 1264
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 1 PVYTQPVCF 9
PV+T CF
Sbjct: 402 PVWTARFCF 410
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTQPV 7
+YT+PV
Sbjct: 1259 IYTKPV 1264
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTQPV 7
+YT+PV
Sbjct: 1259 IYTKPV 1264
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTQPV 7
+YT+PV
Sbjct: 1259 IYTKPV 1264
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTQPV 7
+YT+PV
Sbjct: 1259 IYTKPV 1264
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTQPV 7
+YT+PV
Sbjct: 1259 IYTKPV 1264
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTQPV 7
+YT+PV
Sbjct: 1259 IYTKPV 1264
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTQPV 7
+YT+PV
Sbjct: 1259 IYTKPV 1264
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTQPV 7
+YT+PV
Sbjct: 1259 IYTKPV 1264
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 1 PVYTQPVCF 9
P Y +P C+
Sbjct: 444 PGYAKPSCY 452
>sp|VL2_HPV54|MINOR capsid protein L2|Human papillomavirus type 54
Query: 1 PVYTQP 6
P+YT+P
Sbjct: 160 PIYTEP 165
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 YTQPVC 8
+T+PVC
Sbjct: 503 HTRPVC 508
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 3 YTQPVC 8
+T+PVC
Sbjct: 503 HTRPVC 508
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 4 TQPVC 8
TQPVC
Sbjct: 40 TQPVC 44
>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P
Query: 1 PVYTQPV 7
PVY PV
Sbjct: 30 PVYPHPV 36
193|Sequence|961|970|PVCFAPNMMY
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 CFAPNMM 9
C APNM+
Sbjct: 1006 CHAPNML 1012
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 1 PVCFAP 6
P CF+P
Sbjct: 620 PFCFSP 625
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 1 PVCFAP 6
P CF+P
Sbjct: 620 PFCFSP 625
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 PVCFAP 6
P CF+P
Sbjct: 620 PFCFSP 625
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 PVCFAP 6
P CF+P
Sbjct: 620 PFCFSP 625
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 PV-CFAPNMM 9
PV CF P+M+
Sbjct: 1677 PVECFEPSML 1686
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 PV-CFAPNMM 9
PV CF P+M+
Sbjct: 1677 PVECFEPSML 1686
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 PV-CFAPNMM 9
PV CF P+M+
Sbjct: 1673 PVECFEPSML 1682
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 PVCFAPNM 8
P C +P+M
Sbjct: 576 PPCLSPDM 583
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 PVCFAPNM 8
P C +P+M
Sbjct: 576 PPCLSPDM 583
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 1 PVCFAPNMMY 10
PV APN+++
Sbjct: 597 PVAHAPNVIH 606
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VCFAPN 7
VC+ PN
Sbjct: 289 VCYRPN 294
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 PVCFAPNMMY 10
PV APN+++
Sbjct: 597 PVAHAPNVIH 606
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 PVCFAPNMMY 10
PV APN+++
Sbjct: 597 PVAHAPNVIH 606
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 FAPNMM 9
APNMM
Sbjct: 802 LAPNMM 807
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 VCFAPNMM 9
VCF P M
Sbjct: 401 VCFLPGGM 408
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 VCFAPNMM 9
VCF P M
Sbjct: 401 VCFLPGGM 408
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 2 VCFAPNMM 9
VCF P M
Sbjct: 401 VCFLPGGM 408
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 3 CFAPNMM 9
CF NMM
Sbjct: 218 CFLLNMM 224
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 3 CFAPNMM 9
CF NMM
Sbjct: 218 CFLLNMM 224
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 PVCFAPN 7
P+C PN
Sbjct: 721 PLCKVPN 727
>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PVCFAPNM 8
P+C AP +
Sbjct: 21 PICPAPGV 28
>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)
Query: 3 CFAPN 7
CF PN
Sbjct: 354 CFLPN 358
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 3 CFAPN 7
CF PN
Sbjct: 354 CFLPN 358
>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 CFAPN 7
CF PN
Sbjct: 354 CFLPN 358
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 FAPNMM 9
APNMM
Sbjct: 802 LAPNMM 807
194|Sequence|966|975|PNMMYPVPVS
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 2 NMMYPVPVS 10
NM+YP+P +
Sbjct: 651 NMLYPIPAN 659
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 2 NMMYPVPVS 10
NM+YP+P +
Sbjct: 618 NMLYPIPAN 626
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 2 NMMYPVPVS 10
NM+YP+P +
Sbjct: 667 NMLYPIPAN 675
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 2 NMMYPVPVS 10
NM+YP+P +
Sbjct: 636 NMLYPIPAN 644
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 2 NMMYPVPVS 10
NM+YP+P +
Sbjct: 643 NMLYPIPAN 651
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 2 NMMYPVPVS 10
NM+YP+P +
Sbjct: 639 NMLYPIPAN 647
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 2 NMMYPVPVS 10
NM+YP+P +
Sbjct: 622 NMLYPIPAN 630
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 2 NMMYPVPV 9
NM+YP+P
Sbjct: 642 NMLYPIPA 649
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 2 NMMYPVP 8
NM+YP+P
Sbjct: 624 NMLYPIP 630
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 PNMMYPVP 8
PN +P+P
Sbjct: 746 PNFFFPLP 753
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 PNMMYPVP 8
PN+ +P P
Sbjct: 754 PNLFFPSP 761
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 PNMMYPVPV 9
PN +P+P
Sbjct: 730 PNFFFPLPA 738
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 PNMMYPVPV 9
PN +P+P
Sbjct: 746 PNFFFPLPA 754
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 MMYPVPV 9
+ YPVP+
Sbjct: 1900 ITYPVPI 1906
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 YPVPV 9
YPVPV
Sbjct: 1965 YPVPV 1969
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PNMMYP 6
PN +YP
Sbjct: 481 PNELYP 486
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 MMYPVP 8
M+YP P
Sbjct: 63 MVYPAP 68
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 MMYPVP 8
M+YP P
Sbjct: 63 MVYPAP 68
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 5 YPVPV 9
YPVP+
Sbjct: 1961 YPVPI 1965
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 2 NMMYPVP 8
M YPVP
Sbjct: 937 TMFYPVP 943
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 YPVPVS 10
YPVPV+
Sbjct: 975 YPVPVN 980
>sp|TEG3_VZVO|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 NMMYPVPVS 10
N M P P+S
Sbjct: 179 NQMQPQPIS 187
>sp|TEG3_VZVD|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 NMMYPVPVS 10
N M P P+S
Sbjct: 179 NQMQPQPIS 187
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 4 MYPVPV 9
MYP+P+
Sbjct: 407 MYPIPL 412
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 YPVPV 9
YPVP+
Sbjct: 1968 YPVPI 1972
195|Sequence|971|980|PVPVSPGVQP
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 3 PVSPGVQ 9
PV PG+Q
Sbjct: 369 PVKPGLQ 375
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PVSPGVQ 9
PV PG+Q
Sbjct: 369 PVKPGLQ 375
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 2 VPVSPGVQ 9
VPV PG Q
Sbjct: 281 VPVDPGSQ 288
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PVPVSPG 7
P+PV+P
Sbjct: 1920 PIPVTPA 1926
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PVPVSPG 7
P+PV+P
Sbjct: 1920 PIPVTPA 1926
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 4 VSPGVQP 10
V PGV+P
Sbjct: 396 VPPGVKP 402
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PVPVSPG 7
P+PV+P
Sbjct: 1920 PIPVTPA 1926
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PVPVSPG 7
P+PV+P
Sbjct: 1920 PIPVTPA 1926
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PVPVSPG 7
P+PV+P
Sbjct: 1920 PIPVTPA 1926
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 PVSPGVQP 10
PV PG P
Sbjct: 931 PVKPGSGP 938
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PVPVSPGVQ 9
PV +SPG++
Sbjct: 39 PVEMSPGIE 47
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 PVSPG 7
PVSPG
Sbjct: 2005 PVSPG 2009
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 PVSPG 7
PVSPG
Sbjct: 2005 PVSPG 2009
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 PVSPG 7
PVSPG
Sbjct: 2005 PVSPG 2009
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 PVSPG 7
PVSPG
Sbjct: 2005 PVSPG 2009
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 PVSPG 7
PVSPG
Sbjct: 2005 PVSPG 2009
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 PVSPG 7
PVSPG
Sbjct: 2005 PVSPG 2009
>sp|UL79_HHV8P|PROTEIN UL79 homolog|Human herpesvirus 8 type P
Query: 3 PVSPGVQ 9
P+SPG++
Sbjct: 11 PLSPGLR 17
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 PVSPG 7
PVSPG
Sbjct: 2005 PVSPG 2009
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 PVSPG 7
PVSPG
Sbjct: 2005 PVSPG 2009
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 PVPVSPG 7
P P+SP
Sbjct: 1950 PTPISPA 1956
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 PVSPG 7
PVSPG
Sbjct: 2005 PVSPG 2009
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 PVPVSP 6
PVP SP
Sbjct: 1328 PVPTSP 1333
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 PVPVSP 6
PVP SP
Sbjct: 1349 PVPTSP 1354
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 2 VPVSPGVQP 10
+PVSP + P
Sbjct: 418 IPVSPSISP 426
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 PVPVSP 6
PVP SP
Sbjct: 1329 PVPTSP 1334
>sp|NS1_I82A8|NON-STRUCTURAL protein 1|Influenza A virus (strain
Query: 1 PVPVSPG 7
P+P PG
Sbjct: 162 PIPSMPG 168
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VPVSPGV 8
VPV+P V
Sbjct: 662 VPVTPNV 668
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VPVSPGV 8
VPV+P V
Sbjct: 662 VPVTPNV 668
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 PVPVSP 6
PVP SP
Sbjct: 1330 PVPTSP 1335
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PVPVSP 6
PVPV+P
Sbjct: 976 PVPVNP 981
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 1 PVPVSP 6
P PVSP
Sbjct: 370 PAPVSP 375
196|Sequence|976|985|PGVQPLYPIP
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 1 PGVQPLYPIP 10
PG PLY IP
Sbjct: 18 PGKFPLYTIP 27
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 4 QPLYPIP 10
QP+ PIP
Sbjct: 181 QPMTPIP 187
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 1 PGVQPLYPI 9
PG +PLYPI
Sbjct: 591 PG-EPLYPI 598
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 1 PGVQPLYPI 9
PG +PLYPI
Sbjct: 591 PG-EPLYPI 598
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 1 PGVQPLYPI 9
PG +PLYPI
Sbjct: 591 PG-EPLYPI 598
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 PGVQPLYPIP 10
P QP PIP
Sbjct: 1749 PSNQPTKPIP 1758
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 PGVQPLY 7
PG PLY
Sbjct: 561 PGSGPLY 567
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 PGVQPLYPIP 10
P ++P PIP
Sbjct: 1773 PPLEPEAPIP 1782
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 VQPLYPI 9
+ PL+P+
Sbjct: 272 IDPLFPV 278
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 3 VQPLYP 8
V+PL+P
Sbjct: 1020 VEPLFP 1025
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 3 VQPLYP 8
V+PL+P
Sbjct: 1020 VEPLFP 1025
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 3 VQPLYP 8
V+PL+P
Sbjct: 1020 VEPLFP 1025
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 3 VQPLYP 8
V+PL+P
Sbjct: 1020 VEPLFP 1025
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 3 VQPLYP 8
V+PL+P
Sbjct: 1020 VEPLFP 1025
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 3 VQPLYP 8
V+PL+P
Sbjct: 1020 VEPLFP 1025
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 3 VQPLYP 8
V+PL+P
Sbjct: 1020 VEPLFP 1025
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 3 VQPLYP 8
V+PL+P
Sbjct: 1020 VEPLFP 1025
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 3 VQPLYP 8
V+PL+P
Sbjct: 1020 VEPLFP 1025
197|Sequence|981|990|LYPIPMTPMP
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 LYPIPMTPMP 10
L P+PMTP P
Sbjct: 396 LSPLPMTPEP 405
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 5 PMTPMP 10
PMTP+P
Sbjct: 182 PMTPIP 187
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 LYPIPMTPM 9
++P+P TP+
Sbjct: 735 MFPLPETPL 743
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 3 PIPMTPMP 10
PIP+ P P
Sbjct: 24 PIPVCPTP 31
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 3 PIPMTPMP 10
PIP+ P P
Sbjct: 24 PIPVCPTP 31
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PIPMTP 8
PIP+TP
Sbjct: 1920 PIPVTP 1925
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PIPMTP 8
PIP+TP
Sbjct: 1920 PIPVTP 1925
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PIPMTP 8
PIP+TP
Sbjct: 1920 PIPVTP 1925
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PIPMTP 8
PIP+TP
Sbjct: 1920 PIPVTP 1925
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PIPMTP 8
PIP+TP
Sbjct: 1920 PIPVTP 1925
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 2 YPIPMTP 8
+P PM P
Sbjct: 545 HPFPMKP 551
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YPIPMTPMP 10
+P P+ P+P
Sbjct: 218 HPAPVGPLP 226
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 YPIPMTPM 9
YP+ +TP+
Sbjct: 1226 YPLVVTPL 1233
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LYPIPMTPM 9
L PIPM P+
Sbjct: 628 LRPIPMRPL 636
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 YPIPMTPM 9
YP+ +TP+
Sbjct: 1226 YPLVVTPL 1233
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LYPIPMTPM 9
L PIPM P+
Sbjct: 628 LRPIPMRPL 636
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LYPIPMTPM 9
YP+P+ P+
Sbjct: 974 FYPVPVNPL 982
>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LYPIPMTP 8
L+P+P TP
Sbjct: 255 LFPVPSTP 262
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 YPIPMT 7
YP+P T
Sbjct: 533 YPVPKT 538
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 2 YPIPMT 7
YP+P T
Sbjct: 533 YPVPKT 538
>sp|IR01_HCMVA|UNCHARACTERIZED protein HKLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LYPIPMTP 8
L+P+P TP
Sbjct: 256 LFPVPSTP 263
>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 YPIPMTPMP 10
+P P+ P+P
Sbjct: 218 HPAPVGPLP 226
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 3 PIPMTP 8
P+PM+P
Sbjct: 1125 PVPMSP 1130
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 PMTPMP 10
PM PMP
Sbjct: 9 PMQPMP 14
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 YPIPMTPMP 10
YP+ + P+P
Sbjct: 1119 YPVILNPLP 1127
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 4 IPMTPMP 10
IP TP P
Sbjct: 235 IPCTPPP 241
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 PMTPMP 10
PM PMP
Sbjct: 9 PMQPMP 14
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 YPIPMTP 8
YPI +TP
Sbjct: 925 YPIKVTP 931
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 YPIPMTPMP 10
YP+P+ P
Sbjct: 312 YPVPLELTP 320
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 YPIPMTP 8
YPI +TP
Sbjct: 925 YPIKVTP 931
198|Sequence|986|995|MTPMPVNQAK
>sp|VU84_HHV6U|PROTEIN U84|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 MTPMPVNQAK 10
+TP+PVN +K
Sbjct: 259 VTPIPVNASK 268
>sp|SPI1_CWPXB|SERINE proteinase inhibitor 1|Cowpox virus (strain Brighton Red)
Query: 2 TPMPVN 7
TP+P+N
Sbjct: 131 TPLPIN 136
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 MTPMPVN 7
+TP PVN
Sbjct: 595 LTPTPVN 601
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 1 MTPMPVN 7
+TP PVN
Sbjct: 594 LTPTPVN 600
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 2 TPMPVNQAK 10
+ +PVN+AK
Sbjct: 300 STVPVNRAK 308
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 2 TPMPVNQAK 10
+ +PVN+AK
Sbjct: 300 STVPVNRAK 308
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 PMPVNQ 8
P+PVN+
Sbjct: 899 PVPVNE 904
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TPMPVNQAK 10
+ +PVN+AK
Sbjct: 300 STVPVNRAK 308
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 2 TPMPVNQAK 10
+ +PVN+AK
Sbjct: 300 STVPVNRAK 308
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 PMPVNQ 8
P+PVN+
Sbjct: 899 PVPVNE 904
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 2 TPMPVNQAK 10
+ +PVN+AK
Sbjct: 300 STVPVNRAK 308
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 2 TPMPVNQAK 10
+ +PVN+AK
Sbjct: 300 STVPVNRAK 308
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 PMPVNQ 8
P+PVN+
Sbjct: 895 PVPVNE 900
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 MTPMPVNQAK 10
M P+P++ A+
Sbjct: 719 MAPLPIHTAE 728
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 2 TPMPVNQA 9
TP+P NQ+
Sbjct: 249 TPLPRNQS 256
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 MPVNQA 9
+PVNQA
Sbjct: 529 VPVNQA 534
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 MPVNQA 9
+PVNQA
Sbjct: 529 VPVNQA 534
199|Sequence|991|1000|VNQAKTYRAV
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 KTYRAV 10
+TYRAV
Sbjct: 834 RTYRAV 839
200|Sequence|996|1005|TYRAVPNMPQ
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 YRAVPNMP 9
YR +PN+P
Sbjct: 318 YRRIPNLP 325
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 YRAVPNMP 9
YR +PN+P
Sbjct: 318 YRRIPNLP 325
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TYRAVPNMP 9
TYRAV N+P
Sbjct: 835 TYRAVLNVP 843
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 TYRAVPNMP 9
T RA PN+P
Sbjct: 1912 TNRATPNIP 1920
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 TYRAVPNMP 9
T RA PN+P
Sbjct: 1912 TNRATPNIP 1920
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 TYRAVPNMP 9
T RA PN+P
Sbjct: 1912 TNRATPNIP 1920
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 RAVPNMP 9
RAV NMP
Sbjct: 229 RAVSNMP 235
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YRAVPNMP 9
YRA+ N+P
Sbjct: 830 YRAILNVP 837
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 YRAVPNMP 9
YR PN+P
Sbjct: 326 YRRKPNLP 333
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 YRAVPN 7
YRA PN
Sbjct: 890 YRAAPN 895
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 1 TYRAVPN 7
TYR +PN
Sbjct: 111 TYRLIPN 117
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 1 TYRAVPN 7
TYR +PN
Sbjct: 111 TYRLIPN 117
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 1 TYRAVPN 7
TYR +PN
Sbjct: 111 TYRLIPN 117
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 1 TYRAVPN 7
TYR +PN
Sbjct: 111 TYRLIPN 117
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 1 TYRAVPN 7
TYR +PN
Sbjct: 111 TYRLIPN 117
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 5 VPNMPQ 10
VPN+PQ
Sbjct: 813 VPNVPQ 818
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 5 VPNMPQ 10
VPN+PQ
Sbjct: 813 VPNVPQ 818
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YRAVPNMPQ 10
YRA N+P+
Sbjct: 836 YRAFLNIPR 844
>sp|TEG7_HHV6Z|TEGUMENT protein UL51 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 YRAVPNM 8
Y+A+PN+
Sbjct: 186 YQALPNV 192
>sp|TEG7_HHV6U|TEGUMENT protein UL51 homolog|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 YRAVPNM 8
Y+A+PN+
Sbjct: 178 YQALPNV 184
201|Sequence|1001|1010|PNMPQQRQDQ
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 PNMPQQRQ 8
PNM ++RQ
Sbjct: 1685 PNMLRKRQ 1692
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 PNMPQQRQ 8
PNM ++RQ
Sbjct: 1685 PNMLRKRQ 1692
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 PNMPQQRQ 8
PNM ++RQ
Sbjct: 1685 PNMLRKRQ 1692
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 PNMPQ 5
PN+PQ
Sbjct: 1666 PNLPQ 1670
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 PNMPQ 5
PN+PQ
Sbjct: 1666 PNLPQ 1670
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 PNMPQ 5
PN+PQ
Sbjct: 1666 PNLPQ 1670
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 PNMPQ 5
PN+PQ
Sbjct: 1666 PNLPQ 1670
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 PNMPQ 5
PN+PQ
Sbjct: 1666 PNLPQ 1670
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 PNMPQ 5
PN+PQ
Sbjct: 1666 PNLPQ 1670
>sp|E320_ADE1A|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 PNMPQQRQD 9
PNM + R D
Sbjct: 110 PNMAEIRSD 118
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 NMPQQRQD 9
N P+QRQ+
Sbjct: 1408 NFPKQRQN 1415
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 1 PNMPQQ 6
PNMP++
Sbjct: 383 PNMPEE 388
202|Sequence|1006|1015|QRQDQHHQSA
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RQDQHHQSA 10
RQD+HH S
Sbjct: 129 RQDRHHASV 137
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 RQDQHHQSA 10
RQD+HH S
Sbjct: 129 RQDRHHASV 137
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 RQDQHHQSA 10
RQD+HH S
Sbjct: 129 RQDRHHASV 137
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 QRQDQHHQ 8
+++ QHHQ
Sbjct: 496 KQRHQHHQ 503
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 QRQDQHHQ 8
+++ QHHQ
Sbjct: 496 KQRHQHHQ 503
203|Sequence|1011|1020|HHQSAMMHPA
>sp|NCAP_TOSV|NUCLEOPROTEIN virus (Tos)
Query: 5 AMMHPA 10
AMMHP+
Sbjct: 149 AMMHPS 154
>sp|NCAP_PTPV|NUCLEOPROTEIN toro phlebovirus
Query: 5 AMMHPA 10
AMMHP+
Sbjct: 142 AMMHPS 147
>sp|IORF_CVHOC|PROTEIN I|Human coronavirus OC43 (HCoV-OC43)
Query: 1 HHQSAMMHP 9
+HQ M++P
Sbjct: 33 NHQEGMLYP 41
>sp|UL121_HCMVM|MEMBRANE protein UL121|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HHQSAMMHP 9
HH ++ HP
Sbjct: 84 HHCTSCTHP 92
>sp|LMP1_EBVC|LATENT membrane protein 1|Epstein-Barr virus (strain Cao) (HHV-4)
Query: 1 HHQSAMMHP 9
HH ++ HP
Sbjct: 196 HHDDSLPHP 204
>sp|LMP1_EBVG|LATENT membrane protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 HHQSAMMHP 9
HH ++ HP
Sbjct: 196 HHDDSLPHP 204
204|Sequence|1016|1025|MMHPASAAGP
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 MMHPASAAGP 10
MM PA+ +GP
Sbjct: 1 MMDPAAGSGP 10
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 4 PASAAGP 10
PASA GP
Sbjct: 138 PASAPGP 144
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 MMHPASAAGP 10
MM PA+ +GP
Sbjct: 1 MMDPAAGSGP 10
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 MHPASAAGP 10
M PA AGP
Sbjct: 767 MEPAQVAGP 775
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 MHPASAAGP 10
M PA AGP
Sbjct: 767 MEPAQVAGP 775
>sp|UL78_HCMVM|PROTEIN UL78|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 MMHPASAAG 9
++ PASAAG
Sbjct: 259 VLQPASAAG 267
>sp|UL78_HCMVA|UNCHARACTERIZED protein UL78|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 MMHPASAAG 9
++ PASAAG
Sbjct: 259 VLQPASAAG 267
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 PASAAGP 10
PAS AGP
Sbjct: 1021 PASLAGP 1027
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 4 PASAAGP 10
PAS AGP
Sbjct: 1021 PASLAGP 1027
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 4 PASAAGP 10
PAS AGP
Sbjct: 1021 PASLAGP 1027
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 4 PASAAGP 10
PAS AGP
Sbjct: 1021 PASLAGP 1027
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 4 PASAAGP 10
PAS AGP
Sbjct: 1021 PASLAGP 1027
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 4 PASAAGP 10
PAS AGP
Sbjct: 1021 PASLAGP 1027
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 MHPASAAG 9
+HP +AAG
Sbjct: 31 IHPNAAAG 38
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 2 MHPASAAG 9
+HP +AAG
Sbjct: 31 IHPNAAAG 38
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 2 MHPASAAGP 10
MH ASA P
Sbjct: 1 MHRASANSP 9
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 PASAAGP 10
PA+A GP
Sbjct: 187 PATAQGP 193
>sp|M1_I000F|MATRIX protein 1|Influenza A virus (strain A/Chicken/Weybridge
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 PASAAGP 10
P SAAGP
Sbjct: 471 PGSAAGP 477
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 PASAAGP 10
P SAAGP
Sbjct: 471 PGSAAGP 477
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 MHPASAAGP 10
M PA GP
Sbjct: 767 MEPAQVTGP 775
>sp|M1_I78A3|MATRIX protein 1|Influenza A virus (strain A/Mallard/New
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 MHPASA 7
+HPASA
Sbjct: 2277 LHPASA 2282
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 MHPASA 7
+HPASA
Sbjct: 2277 LHPASA 2282
>sp|M1_I000X|MATRIX protein 1|Influenza A virus (strain A/X-31
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I85A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I33A0|MATRIX protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I61A1|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I54A1|MATRIX protein 1|Influenza A virus (strain A/Swine/May/1954
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I36A0|MATRIX protein 1|Influenza A virus (strain A/Henry/1936
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I18A0|MATRIX protein 1|Influenza A virus (strain A/Brevig
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I97A1|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I97A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I02A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I79A0|MATRIX protein 1|Influenza A virus (strain A/Bangkok/1/1979
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I54A2|MATRIX protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I45A0|MATRIX protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I35A3|MATRIX protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I80AA|MATRIX protein 1|Influenza A virus (strain A/India/6263/1980
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I88A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/8/1988
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I83A8|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I80A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I69A0|MATRIX protein 1|Influenza A virus (strain A/England/878/1969
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I68A4|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I51A0|MATRIX protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I43A0|MATRIX protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I40A0|MATRIX protein 1|Influenza A virus (strain A/Hickox/1940
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I82A9|MATRIX protein 1|Influenza A virus (strain A/Philippines/2/1982
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I77AB|MATRIX protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I57A3|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I57A2|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I57A1|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I82A7|MATRIX protein 1|Influenza A virus (strain A/Swine/Hong
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I78A8|MATRIX protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I77A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I76A6|MATRIX protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I75A0|MATRIX protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I73A5|MATRIX protein 1|Influenza A virus (strain A/Port
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I72A8|MATRIX protein 1|Influenza A virus (strain A/Udorn/1972
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I72A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I72A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I72A2|MATRIX protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I71A1|MATRIX protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I70A0|MATRIX protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I57A0|MATRIX protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I02A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 MHPASA 7
+HPASA
Sbjct: 2274 LHPASA 2279
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 MHPASA 7
+HPASA
Sbjct: 2274 LHPASA 2279
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 MHPASA 7
+HPASA
Sbjct: 2274 LHPASA 2279
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 MHPASA 7
+HPASA
Sbjct: 2274 LHPASA 2279
>sp|M1_I85A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I82A2|MATRIX protein 1|Influenza A virus (strain A/Camel/Mongolia/1982
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 79 HPSSSAG 85
>sp|M1_I80A2|MATRIX protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I78A7|MATRIX protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 MHPASA 7
+HPASA
Sbjct: 2274 LHPASA 2279
>sp|M1_I81A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I77A9|MATRIX protein 1|Influenza A virus (strain A/Equine/New
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I59A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I34A1|MATRIX protein 1|Influenza A virus (strain A/Puerto
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I06A0|MATRIX protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I88A5|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I77AC|MATRIX protein 1|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I60A0|MATRIX protein 1|Influenza A virus (strain A/Ann
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I88A7|MATRIX protein 1|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I67A2|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I37A0|MATRIX protein 1|Influenza A virus (strain A/Swine/29/1937
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I96A0|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|M1_I01A0|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 3 HPASAAG 9
HP+S+AG
Sbjct: 222 HPSSSAG 228
>sp|NEF_HV2KR|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 MMHPASAAG 9
++HPA +G
Sbjct: 191 LLHPAQTSG 199
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 MMHPASAAG 9
++H SAAG
Sbjct: 438 VLHTKSAAG 446
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 MMHPASAAG 9
++H SAAG
Sbjct: 438 VLHTKSAAG 446
>sp|M1_I68A6|MATRIX protein 1|Influenza A virus (strain A/Northern
Query: 3 HPASAAG 9
HP S+AG
Sbjct: 222 HPRSSAG 228
>sp|M1_I57A5|MATRIX protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 3 HPASAAG 9
HP S+AG
Sbjct: 222 HPRSSAG 228
>sp|M1_I50A0|MATRIX protein 1|Influenza A virus (strain A/Fort
Query: 3 HPASAAG 9
HP S+AG
Sbjct: 222 HPRSSAG 228
>sp|M1_I68A0|MATRIX protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 3 HPASAAG 9
HP S+AG
Sbjct: 222 HPRSSAG 228
>sp|M1_I02A7|MATRIX protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 3 HPASAAG 9
HP S+AG
Sbjct: 220 HPNSSAG 226
>sp|M1_I01A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 HPASAAG 9
HP S+AG
Sbjct: 222 HPNSSAG 228
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 4 PASAAGP 10
P S AGP
Sbjct: 1023 PVSLAGP 1029
>sp|M1_I05A1|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 3 HPASAAG 9
HP S+AG
Sbjct: 222 HPNSSAG 228
>sp|M1_I03A0|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 3 HPASAAG 9
HP S+AG
Sbjct: 222 HPNSSAG 228
>sp|M1_I02A6|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 HPASAAG 9
HP S+AG
Sbjct: 222 HPNSSAG 228
>sp|M1_I00A0|MATRIX protein 1|Influenza A virus (strain A/Duck/Hong
Query: 3 HPASAAG 9
HP S+AG
Sbjct: 222 HPNSSAG 228
>sp|M1_I02A5|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 HPASAAG 9
HP S+AG
Sbjct: 222 HPNSSAG 228
205|Sequence|1021|1030|SAAGPPIAAT
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 2 AAGPP 6
AAGPP
Sbjct: 350 AAGPP 354
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 2 AAGPP 6
AAGPP
Sbjct: 350 AAGPP 354
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 1 SAAGPPIA 8
+AAGPP A
Sbjct: 425 TAAGPPKA 432
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 SAAGPPIA 8
+AAGPP A
Sbjct: 425 TAAGPPKA 432
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 AGPPIA 8
AGPP+A
Sbjct: 491 AGPPVA 496
206|Sequence|1026|1035|PIAATPPAYS
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PIAATPPAYS 10
P+ ++PPAYS
Sbjct: 703 PVFSSPPAYS 712
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKLS 629
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPKQS 629
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 619 PFAAAPPEQS 628
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 614 PFAAAPPEQS 623
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I01A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 284 PFAAAPPEQS 293
>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 284 PFAAAPPEQS 293
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 613 PFAAAPPEQS 622
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEQS 629
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 PIAATPPAYS 10
P AA PP S
Sbjct: 620 PFAAAPPEPS 629
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 2 IAATPPAYS 10
+ TPP YS
Sbjct: 73 VKVTPPDYS 81
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 2 IAATPPAYS 10
+ TPP YS
Sbjct: 73 VKVTPPDYS 81
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 IAATPPAYS 10
+ TPP YS
Sbjct: 73 VKVTPPDYS 81
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 IAATPPAYS 10
+ TPP YS
Sbjct: 65 VKVTPPDYS 73
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 2 IAATPPAYS 10
+ TPP YS
Sbjct: 73 VKVTPPDYS 81
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 2 IAATPPAYS 10
+ TPP YS
Sbjct: 73 VKVTPPDYS 81
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 2 IAATPPAYS 10
+ TPP YS
Sbjct: 73 VKVTPPDYS 81
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 2 IAATPPAYS 10
+ TPP YS
Sbjct: 73 VKVTPPDYS 81
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 1 PIAATPPA 8
P+A PPA
Sbjct: 400 PMAEYPPA 407
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 PIAATPPA 8
P+A PPA
Sbjct: 400 PMAEYPPA 407
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 1 PIAATPPA 8
P+A PPA
Sbjct: 400 PMAEYPPA 407
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 IAATPPAYS 10
+ TPP YS
Sbjct: 73 VKVTPPDYS 81
>sp|HBEAG_HBVD5|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 5 TPPAY 9
TPPAY
Sbjct: 157 TPPAY 161
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 1 PIAATPPAYS 10
P+A TP +S
Sbjct: 762 PVAGTPNVFS 771
>sp|CAPSD_HBVD5|CAPSID protein|Hepatitis B virus genotype D
Query: 5 TPPAY 9
TPPAY
Sbjct: 128 TPPAY 132
207|Sequence|1031|1040|PPAYSTQYVA
>sp|TRX1_HHV6Z|TRIPLEX capsid protein 1|Human herpesvirus 6B (strain Z29)
Query: 1 PPAYSTQYV 9
P +STQYV
Sbjct: 187 PRQHSTQYV 195
>sp|TRX1_HHV6U|TRIPLEX capsid protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PPAYSTQYV 9
P +STQYV
Sbjct: 187 PRQHSTQYV 195
>sp|TRX1_HHV6H|TRIPLEX capsid protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 1 PPAYSTQYV 9
P +STQYV
Sbjct: 187 PRQHSTQYV 195
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 PPAYSTQYVA 10
PP+++T Y++
Sbjct: 5611 PPSHATTYLS 5620
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 PPAYSTQYV 9
PP YS++ V
Sbjct: 198 PPKYSSKVV 206
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 PPAYSTQYV 9
PP YS++ V
Sbjct: 198 PPKYSSKVV 206
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 2 PAYSTQYVA 10
PA+ TQY++
Sbjct: 422 PAHCTQYIS 430
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 PPAYSTQYVA 10
PP +ST+ ++
Sbjct: 467 PPLFSTKVIS 476
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 PPAYSTQYVA 10
PP +ST+ ++
Sbjct: 467 PPLFSTKVIS 476
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 PPAYSTQYVA 10
PP +ST+ ++
Sbjct: 467 PPLFSTKIIS 476
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 PPAYSTQYVA 10
PP +ST+ ++
Sbjct: 467 PPLFSTKIIS 476
>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PPAYSTQYV 9
P +YS YV
Sbjct: 156 PTSYSLNYV 164
>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PPAYSTQYV 9
P +YS YV
Sbjct: 156 PTSYSLNYV 164
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 PPAYSTQYVA 10
PP +ST+ ++
Sbjct: 468 PPLFSTKIIS 477
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 PPAYSTQYVA 10
PP +ST+ ++
Sbjct: 468 PPLFSTKIIS 477
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 1 PPAYSTQY 8
PP Y QY
Sbjct: 771 PPGYPKQY 778
208|Sequence|1036|1045|TQYVAYSPQQ
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 QYVAYSPQ 9
Q VAYSP+
Sbjct: 1041 QDVAYSPE 1048
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 YVAYSP 8
Y+AY+P
Sbjct: 37 YIAYNP 42
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 QYVAYSPQQ 10
+YV Y P Q
Sbjct: 3403 RYVDYMPAQ 3411
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 5 AYSPQQ 10
AYSP+Q
Sbjct: 890 AYSPEQ 895
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 QYVAYS 7
QYV+YS
Sbjct: 34 QYVSYS 39
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 QYVAYS 7
QYV+YS
Sbjct: 26 QYVSYS 31
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 2 QYVAYS 7
QYV+YS
Sbjct: 34 QYVSYS 39
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 QYVAYS 7
QYV+YS
Sbjct: 34 QYVSYS 39
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 2 QYVAYS 7
QYV+YS
Sbjct: 34 QYVSYS 39
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 2 QYVAYS 7
QYV+YS
Sbjct: 34 QYVSYS 39
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 2 QYVAYS 7
QYV+YS
Sbjct: 34 QYVSYS 39
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 2 QYVAYS 7
QYV+YS
Sbjct: 34 QYVSYS 39
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 2 QYVAYS 7
QYV+YS
Sbjct: 34 QYVSYS 39
209|Sequence|1041|1050|YSPQQFPNQP
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 YSPQQFPN 8
+SP FPN
Sbjct: 336 FSPGLFPN 343
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 YSPQQFPN 8
+SP FPN
Sbjct: 336 FSPGLFPN 343
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 YSPQQFPN 8
+SP FPN
Sbjct: 336 FSPGLFPN 343
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 YSPQQFPN 8
+SP FPN
Sbjct: 336 FSPGLFPN 343
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 YSPQQFP 7
YSP FP
Sbjct: 338 YSPGLFP 344
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PQQFPNQ 9
P+QFP Q
Sbjct: 449 PRQFPPQ 455
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 1 YSPQQFPNQP 10
Y+ QQ+ N P
Sbjct: 520 YAVQQYLNHP 529
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 YSPQQFPN 8
Y+PQ PN
Sbjct: 2419 YAPQGPPN 2426
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 YSPQQFPN 8
Y+PQ PN
Sbjct: 2419 YAPQGPPN 2426
210|Sequence|1046|1055|FPNQPLVQHV
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 1 FPNQPLVQH 9
FP +PL++H
Sbjct: 90 FPPRPLIRH 98
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 FPNQPLVQHV 10
FP PLV H+
Sbjct: 152 FPPNPLVWHL 161
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 FPNQPLVQHV 10
FP PLV H+
Sbjct: 152 FPPNPLVWHL 161
>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 NQPLVQHV 10
N+PL+ HV
Sbjct: 130 NKPLLTHV 137
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 4 QPLVQHV 10
QP+VQHV
Sbjct: 1004 QPVVQHV 1010
>sp|UL88_HHV6Z|PROTEIN U59|Human herpesvirus 6B (strain Z29)
Query: 3 NQPLVQHV 10
N+PL+ HV
Sbjct: 130 NKPLLTHV 137
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 5 PLVQHV 10
PLVQHV
Sbjct: 647 PLVQHV 652
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 3 NQPLVQHV 10
++PL+QHV
Sbjct: 614 HRPLIQHV 621
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 3 NQPLVQH 9
N PL++H
Sbjct: 40 NSPLIEH 46
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 2 PNQPLVQHV 10
P QP++Q+V
Sbjct: 275 PMQPVIQYV 283
>sp|P30II_HTL1A|ACCESSORY protein p30II|Human T-cell leukemia virus 1
Query: 1 FPNQPLVQH 9
+P+ PL+ H
Sbjct: 229 YPSTPLLPH 237
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 NQPLVQH 9
N P+V+H
Sbjct: 15 NSPIVKH 21
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 4 QPLVQHV 10
QP+VQH
Sbjct: 1004 QPVVQHA 1010
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 NQPLVQH 9
N P+V+H
Sbjct: 15 NSPIVKH 21
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 NQPLVQH 9
N P+V+H
Sbjct: 15 NSPIVKH 21
>sp|P30II_HTL1C|ACCESSORY protein p30II|Human T-cell leukemia virus 1
Query: 1 FPNQPLVQH 9
+P+ PL+ H
Sbjct: 229 YPSTPLLPH 237
>sp|VE7_HPV11|PROTEIN E7|Human papillomavirus 11
Query: 4 QPLVQH 9
QPL QH
Sbjct: 46 QPLTQH 51
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 1 FPNQPLVQH 9
F N P QH
Sbjct: 774 FDNSPTSQH 782
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 1 FPNQPLVQH 9
F N P QH
Sbjct: 774 FDNSPTSQH 782
>sp|VE4_HPV54|PROTEIN E4|Human papillomavirus type 54
Query: 2 PNQPLVQHV 10
P+QP+ HV
Sbjct: 22 PDQPIPHHV 30
211|Sequence|1051|1060|LVQHVPHYQS
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 4 HVPHYQ 9
H+PHYQ
Sbjct: 1117 HLPHYQ 1122
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LVQHVPHYQS 10
LVQ +P Y+S
Sbjct: 481 LVQRIPDYRS 490
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LVQHVPHYQS 10
LVQ +P Y+S
Sbjct: 481 LVQRIPDYRS 490
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LVQHVPHY 8
L++H+P Y
Sbjct: 257 LIEHLPEY 264
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 LVQHVPHYQ 9
L+Q +P+Y+
Sbjct: 897 LIQKIPNYK 905
>sp|UL01_HCMVM|GLYCOPROTEIN UL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LVQHVPHYQ 9
LVQ +PH Q
Sbjct: 24 LVQAIPHKQ 32
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 LVQHVP 6
L+QHVP
Sbjct: 436 LIQHVP 441
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 HVPHY 8
H PHY
Sbjct: 5410 HKPHY 5414
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 HVPHY 8
H PHY
Sbjct: 5430 HKPHY 5434
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 HVPHY 8
H PHY
Sbjct: 5460 HKPHY 5464
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 HVPH 7
HVPH
Sbjct: 3988 HVPH 3991
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 HVPH 7
HVPH
Sbjct: 3988 HVPH 3991
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LVQHVPHYQS 10
++QH+P Y +
Sbjct: 376 VIQHLPGYGT 385
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 1 LVQHVPHY 8
++ HVP Y
Sbjct: 413 MIPHVPLY 420
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 1 LVQHVPHY 8
++ HVP Y
Sbjct: 413 MIPHVPLY 420
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 6 PHYQ 9
PHYQ
Sbjct: 941 PHYQ 944
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 6 PHYQS 10
PHY+S
Sbjct: 416 PHYES 420
>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 HVPHYQS 10
+ PHY+S
Sbjct: 395 YYPHYKS 401
>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)
Query: 4 HVPHYQS 10
+ PHY+S
Sbjct: 391 YYPHYKS 397
>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)
Query: 4 HVPHYQS 10
+ PHY+S
Sbjct: 395 YYPHYKS 401
>sp|PRO_ADE41|PROTEASE adenovirus F serotype 41
Query: 1 LVQHVPHYQ 9
L QH P+++
Sbjct: 178 LTQHSPYFR 186
212|Sequence|1056|1065|PHYQSQHPHV
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 PHYQSQHPHV 10
PHY S+HP V
Sbjct: 42 PHYASRHPRV 51
>sp|VIF_HV19N|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S+HP V
Sbjct: 43 HYESRHPRV 51
>sp|VIF_HV1M2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S+HP V
Sbjct: 43 HYESRHPRV 51
>sp|VIF_HV1VI|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
H+QS+HP V
Sbjct: 43 HFQSRHPRV 51
>sp|VIF_HV1MP|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S+HP V
Sbjct: 43 HYESRHPKV 51
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 HYQSQHPH 9
HY +HP+
Sbjct: 2815 HYDCEHPY 2822
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 HYQSQHPH 9
HY +HP+
Sbjct: 2802 HYDCEHPY 2809
>sp|VIF_HV1MA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S+HP V
Sbjct: 43 HYESRHPKV 51
>sp|VIF_HV192|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S+HP +
Sbjct: 43 HYESRHPKI 51
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S+HP +
Sbjct: 43 HYESRHPKI 51
>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S HP V
Sbjct: 43 HYESTHPRV 51
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 HYQSQHPH 9
HY HP+
Sbjct: 2784 HYDQDHPY 2791
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 HYQSQHPH 9
HY HP+
Sbjct: 2781 HYDQDHPY 2788
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 HYQSQHPH 9
HY HP+
Sbjct: 2784 HYDQDHPY 2791
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 HYQSQHPH 9
HY HP+
Sbjct: 2784 HYDQDHPY 2791
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 HYQSQHPH 9
HY HP+
Sbjct: 2784 HYDQDHPY 2791
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 HYQSQHPH 9
HY HP+
Sbjct: 2784 HYDQDHPY 2791
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 HYQSQHPH 9
HY HP+
Sbjct: 2784 HYDQDHPY 2791
>sp|VIF_HV1ET|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY S+HP V
Sbjct: 43 HYDSRHPKV 51
>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S HP +
Sbjct: 43 HYESTHPRI 51
>sp|VPK2_VACCP|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 PHYQSQHPHV 10
P YQ PH+
Sbjct: 9 PEYQWMSPHL 18
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 HYQSQHPH 9
H Q Q+PH
Sbjct: 124 HIQGQNPH 131
>sp|VIF_HV1MN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S HP +
Sbjct: 43 HYESTHPRI 51
>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S HP +
Sbjct: 43 HYESTHPRI 51
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 HYQSQHPH 9
H Q Q+PH
Sbjct: 124 HIQGQNPH 131
>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PHYQSQHPH 9
P YQ PH
Sbjct: 9 PEYQWMSPH 17
>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY S+HP +
Sbjct: 43 HYDSRHPKI 51
>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PHYQSQHPH 9
P YQ PH
Sbjct: 9 PEYQWMSPH 17
>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PHYQSQHPH 9
P YQ PH
Sbjct: 9 PEYQWMSPH 17
>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)
Query: 1 PHYQSQHPH 9
P YQ PH
Sbjct: 9 PEYQWMSPH 17
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 HYQSQHPH 9
H Q Q+PH
Sbjct: 124 HIQGQNPH 131
>sp|VPK2_VACCT|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Tian Tan)
Query: 1 PHYQSQHPH 9
P YQ PH
Sbjct: 9 PEYQWMSPH 17
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 HYQSQHPH 9
H Q Q+PH
Sbjct: 124 HIQGQNPH 131
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 HYQSQHPH 9
H Q Q+PH
Sbjct: 124 HIQGQNPH 131
>sp|VIF_HV1AN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S++P V
Sbjct: 43 HYESRNPRV 51
>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
H++S+HP +
Sbjct: 43 HFESRHPKI 51
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY S HP +
Sbjct: 43 HYDSNHPKI 51
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY S HP +
Sbjct: 43 HYDSNHPKI 51
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S HP +
Sbjct: 43 HYESPHPRI 51
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S HP +
Sbjct: 43 HYESPHPRI 51
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S HP +
Sbjct: 43 HYESPHPRI 51
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S HP +
Sbjct: 43 HYESPHPRI 51
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S HP +
Sbjct: 43 HYESPHPRI 51
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S HP +
Sbjct: 43 HYESPHPRI 51
>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
H++S HP +
Sbjct: 43 HFESTHPRI 51
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S HP +
Sbjct: 43 HYESPHPRI 51
>sp|VIF_HV1LW|TRUNCATED virion infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S HP +
Sbjct: 43 HYESPHPRI 51
>sp|VP30_MABVP|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 PHYQSQHPHV 10
PHY + HP
Sbjct: 29 PHYTNHHPRA 38
>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S HP +
Sbjct: 43 HYESPHPKI 51
>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PHYQSQHPHV 10
PH S+ PH
Sbjct: 260 PHATSRRPHT 269
>sp|VP30_MABVA|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 PHYQSQHPHV 10
PHY + HP
Sbjct: 29 PHYTNHHPRA 38
>sp|VIF_HV1YB|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHP 8
HY+++HP
Sbjct: 43 HYETKHP 49
>sp|VIF_HV1JR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S +P V
Sbjct: 43 HYESTNPRV 51
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY+S+H V
Sbjct: 43 HYESRHSRV 51
>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)
Query: 1 PHYQSQH 7
P Y S+H
Sbjct: 115 PKYNSEH 121
>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY S HP +
Sbjct: 43 HYDSHHPKI 51
>sp|VP30_MABVM|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 PHYQSQHPHV 10
PHY + HP
Sbjct: 29 PHYTNYHPRA 38
>sp|VIF_HV1YF|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HYQSQHPHV 10
HY++ HP +
Sbjct: 43 HYETHHPKI 51
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 1 PHYQSQHPH 9
P+++ +H H
Sbjct: 220 PYFKVEHSH 228
>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P
Query: 1 PHYQSQHPHV 10
P Y ++HP +
Sbjct: 62 PLYAARHPEL 71
213|Sequence|1061|1070|QHPHVYSPVI
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 2 HPHVYSP 8
HPHV+ P
Sbjct: 445 HPHVHHP 451
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 2 HPHVYSP 8
HPHV+ P
Sbjct: 445 HPHVHHP 451
>sp|E311_ADE05|EARLY E3A 10.5 kDa glycoprotein|Human adenovirus C serotype 5
Query: 3 PHVYSPVI 10
P +YSP+I
Sbjct: 62 PPIYSPII 69
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 HVYSPVI 10
+VYSPV+
Sbjct: 213 YVYSPVV 219
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 HVYSPVI 10
+VYSPV+
Sbjct: 213 YVYSPVV 219
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 HPHVYSPVI 10
HP+ Y+P I
Sbjct: 131 HPNDYTPDI 139
>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62
Query: 1 QHPHVYSP 8
+HP +Y+P
Sbjct: 268 EHPSIYTP 275
>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61
Query: 1 QHPHVYSP 8
+HP +Y+P
Sbjct: 262 EHPSIYTP 269
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 HPHVYSPVI 10
HPH+ PV+
Sbjct: 2283 HPHLIHPVM 2291
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 3 PHVYS 7
PH+YS
Sbjct: 267 PHIYS 271
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 QHPHVYSPV 9
++PHV PV
Sbjct: 871 EYPHVLGPV 879
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 3 PHVYSPV 9
PH ++P+
Sbjct: 725 PHTFAPI 731
>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)
Query: 2 HPHVYSPVI 10
HP Y+P I
Sbjct: 131 HPDDYTPDI 139
>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 HPHVYSPVI 10
HP Y+P I
Sbjct: 131 HPDDYTPDI 139
>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)
Query: 2 HPHVYSPVI 10
HP Y+P I
Sbjct: 131 HPDDYTPDI 139
>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann
Query: 2 HPHVYSPVI 10
HP Y+P I
Sbjct: 131 HPDDYTPDI 139
>sp|E1BS_ADE40|E1B protein, small T-antigen|Human adenovirus F serotype 40
Query: 1 QHPHVYSPV 9
Q PH PV
Sbjct: 139 QRPHGLDPV 147
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 5 VYSPVI 10
+YSPVI
Sbjct: 546 MYSPVI 551
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 2 HPHVYS 7
H HVY+
Sbjct: 561 HAHVYT 566
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PHVYSPVI 10
P+VYSP +
Sbjct: 569 PNVYSPCM 576
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PHVYSPVI 10
P+VYSP +
Sbjct: 569 PNVYSPCM 576
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 PHVYSPVI 10
PH SP+I
Sbjct: 1735 PHSSSPLI 1742
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 HVYSPV 9
H YSPV
Sbjct: 2905 HSYSPV 2910
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 HPHVYS 7
H HVY+
Sbjct: 561 HAHVYT 566
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 HVYSPV 9
H YSPV
Sbjct: 2905 HSYSPV 2910
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 4 HVYSPV 9
H YSPV
Sbjct: 2903 HSYSPV 2908
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 2 HPHVYS 7
H HVY+
Sbjct: 561 HAHVYT 566
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 HPHVYSPVI 10
HP ++SP++
Sbjct: 2581 HPIMWSPIV 2589
>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)
Query: 3 PHVYS 7
PHVYS
Sbjct: 188 PHVYS 192
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 HPHVYSPVI 10
HP ++SP +
Sbjct: 1641 HPILFSPKV 1649
214|Sequence|1066|1075|YSPVIQGNAR
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YSPVIQGN 8
Y+P IQGN
Sbjct: 424 YAPPIQGN 431
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YSPVIQGNAR 10
Y+P IQG R
Sbjct: 425 YAPPIQGQIR 434
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 4 VIQGNAR 10
+IQGN+R
Sbjct: 56 IIQGNSR 62
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YSPVIQGN 8
Y+P I+GN
Sbjct: 432 YAPPIKGN 439
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 3 PVIQGN 8
PV+QGN
Sbjct: 321 PVLQGN 326
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 3 PVIQGN 8
PV+QGN
Sbjct: 321 PVLQGN 326
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YSPVIQGN 8
Y+P I+GN
Sbjct: 408 YAPPIRGN 415
>sp|RUVV_VARV|RESOLVASE OPG149|Variola virus
Query: 2 SPVIQGNA 9
SPV+ GN+
Sbjct: 112 SPVMSGNS 119
>sp|RUVV_VAR67|RESOLVASE OPG149|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 SPVIQGNA 9
SPV+ GN+
Sbjct: 112 SPVMSGNS 119
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YSPVIQGNAR 10
Y+P I+G R
Sbjct: 435 YAPPIEGQIR 444
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YSPVIQGNAR 10
Y+P I+G R
Sbjct: 429 YAPPIEGQIR 438
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YSPVIQGN 8
Y+P I+GN
Sbjct: 440 YAPPIRGN 447
>sp|RUVV_VACCA|HOLLIDAY junction resolvase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 SPVIQGNA 9
SPV+ GN+
Sbjct: 112 SPVMSGNS 119
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 YSPVIQGNAR 10
Y+P I+G R
Sbjct: 429 YAPPIEGTIR 438
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YSPVIQGNAR 10
Y+P I+G R
Sbjct: 447 YAPPIEGQIR 456
>sp|RUVV_VACCC|RESOLVASE OPG149|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SPVIQGNA 9
SPV+ GN+
Sbjct: 101 SPVMSGNS 108
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YSPVIQGNAR 10
Y+P I+G R
Sbjct: 427 YAPPIKGQIR 436
>sp|RUVV_MONPV|RESOLVASE OPG149|Monkeypox virus (MPXV)
Query: 2 SPVIQGNA 9
SPV+ GN+
Sbjct: 112 SPVMSGNS 119
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YSPVIQGNAR 10
Y+P I+G R
Sbjct: 422 YAPPIRGQIR 431
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YSPVIQGNAR 10
Y+P I+G R
Sbjct: 436 YAPPIRGQIR 445
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YSPVIQGNAR 10
Y+P I+G R
Sbjct: 425 YAPPIRGQIR 434
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YSPVIQGN 8
Y+P I GN
Sbjct: 426 YAPPIAGN 433
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YSPVIQGN 8
Y+P I GN
Sbjct: 423 YAPPIAGN 430
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 PVIQGNA 9
P+I GN+
Sbjct: 3 PIINGNS 9
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 PVIQGNA 9
P+I GN+
Sbjct: 3 PIINGNS 9
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 PVIQGNA 9
P+I GN+
Sbjct: 3 PIINGNS 9
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YSPVIQGN 8
Y+P I GN
Sbjct: 442 YAPPIPGN 449
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 SPVIQGN 8
+PVIQ N
Sbjct: 1747 TPVIQSN 1753
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 SPVIQGN 8
+PV+ GN
Sbjct: 2402 NPVVDGN 2408
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 SPVIQGN 8
+PV+ GN
Sbjct: 2402 NPVVDGN 2408
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 SPVIQGN 8
+PV+ GN
Sbjct: 2395 NPVVDGN 2401
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 SPVIQGN 8
+PV+ GN
Sbjct: 2402 NPVVDGN 2408
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 SPVIQGN 8
+PV+ GN
Sbjct: 2402 NPVVDGN 2408
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 SPVIQGN 8
+PV+ GN
Sbjct: 2402 NPVVDGN 2408
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 SPVIQGN 8
+PV+ GN
Sbjct: 2402 NPVVDGN 2408
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 SPVIQGN 8
+PV+ GN
Sbjct: 2403 NPVVDGN 2409
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 SPVIQGN 8
+PV+ GN
Sbjct: 2403 NPVVDGN 2409
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 SPVIQGN 8
+PV+ GN
Sbjct: 2403 NPVVDGN 2409
215|Sequence|1071|1080|QGNARMMAPP
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 QGNARM 6
QGNAR+
Sbjct: 365 QGNARL 370
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 RMMAPP 10
R+MAPP
Sbjct: 587 RIMAPP 592
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 RMMAPP 10
R+MAPP
Sbjct: 622 RIMAPP 627
216|Sequence|1076|1085|MMAPPTHAQP
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 5 PTHAQP 10
PTHAQP
Sbjct: 1574 PTHAQP 1579
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 5 PTHAQP 10
PTHAQP
Sbjct: 1575 PTHAQP 1580
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 PPTHAQ 9
PPTHA
Sbjct: 5586 PPTHAH 5591
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 5 PTHAQP 10
PTHA P
Sbjct: 1552 PTHADP 1557
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 PPTHA 8
PP+HA
Sbjct: 5611 PPSHA 5615
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 5 PTHAQP 10
PTHA P
Sbjct: 1545 PTHADP 1550
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 5 PTHAQP 10
PTHA P
Sbjct: 1552 PTHADP 1557
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 5 PTHAQP 10
PTHA P
Sbjct: 1548 PTHADP 1553
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 4 PPTHAQP 10
PPT AQP
Sbjct: 130 PPTKAQP 136
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 4 PPTHAQP 10
PPT AQP
Sbjct: 130 PPTKAQP 136
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 4 PPTHAQP 10
PPTH +P
Sbjct: 89 PPTHVRP 95
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 MMAPPTHAQP 10
M APPT QP
Sbjct: 308 MAAPPTLPQP 317
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 MMAPPTHAQP 10
M APPT QP
Sbjct: 308 MAAPPTLPQP 317
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 MMAPPTHAQP 10
M APPT QP
Sbjct: 308 MAAPPTLPQP 317
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 MMAPPTHAQP 10
M APPT QP
Sbjct: 308 MAAPPTLPQP 317
>sp|TEG7_HHV2H|TEGUMENT protein UL51|Human herpesvirus 2 (strain HG52)
Query: 3 APPTHAQP 10
APP+ A+P
Sbjct: 27 APPSEAEP 34
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 4 PPTHAQP 10
PPT QP
Sbjct: 510 PPTAGQP 516
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PPTHAQP 10
PPT QP
Sbjct: 510 PPTAGQP 516
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 2 MAPPTH 7
+APP H
Sbjct: 103 LAPPDH 108
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 5 PTHAQP 10
PTHA P
Sbjct: 1600 PTHASP 1605
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 5 PTHAQP 10
PTHA P
Sbjct: 1601 PTHASP 1606
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 5 PTHAQP 10
PTHA P
Sbjct: 1601 PTHASP 1606
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 5 PTHAQP 10
PTHA P
Sbjct: 1600 PTHASP 1605
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 5 PTHAQP 10
PTHA P
Sbjct: 1603 PTHASP 1608
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 5 PTHAQP 10
PTHA P
Sbjct: 1603 PTHASP 1608
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 MAPPTHA 8
M PPTH
Sbjct: 187 MTPPTHG 193
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 3 APPTHA 8
APPTH
Sbjct: 413 APPTHG 418
217|Sequence|1081|1090|THAQPGLVSS
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 3 AQPGLVSS 10
AQPGL+SS
Sbjct: 432 AQPGLISS 439
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 THAQPG 6
THAQPG
Sbjct: 1575 THAQPG 1580
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 THAQPG 6
THAQPG
Sbjct: 1576 THAQPG 1581
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 HAQPGLVSS 10
HAQ GLV S
Sbjct: 1116 HAQGGLVRS 1124
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 HAQPGLVSS 10
HAQ GLV S
Sbjct: 1116 HAQGGLVRS 1124
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 3 AQPGLVS 9
AQPGL+S
Sbjct: 432 AQPGLLS 438
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 3 AQPGLVS 9
AQPGL+S
Sbjct: 433 AQPGLLS 439
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 HAQPGLVSS 10
HA P LVSS
Sbjct: 2082 HAYPVLVSS 2090
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 3 AQPGLVS 9
AQPGL+S
Sbjct: 433 AQPGLLS 439
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 HAQPGLVSS 10
HA P LVSS
Sbjct: 2082 HAYPVLVSS 2090
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 HAQPGLVSS 10
HA P LVSS
Sbjct: 2082 HAYPVLVSS 2090
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 THAQPG 6
THA PG
Sbjct: 1546 THADPG 1551
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 HAQPGLVSS 10
H+Q GLV S
Sbjct: 1116 HSQGGLVRS 1124
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 THAQPG 6
THA PG
Sbjct: 1553 THADPG 1558
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 THAQPG 6
THA PG
Sbjct: 1553 THADPG 1558
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 THAQPG 6
THA PG
Sbjct: 1549 THADPG 1554
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 THAQPG 6
THA PG
Sbjct: 1604 THASPG 1609
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 THAQPG 6
THA PG
Sbjct: 1601 THASPG 1606
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 THAQPG 6
THA PG
Sbjct: 1604 THASPG 1609
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 THAQPGLVSS 10
T+A GLV+S
Sbjct: 5161 TYASQGLVAS 5170
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 THAQPG 6
THA PG
Sbjct: 1601 THASPG 1606
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 THAQPG 6
THA PG
Sbjct: 1602 THASPG 1607
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 THAQPG 6
THA PG
Sbjct: 1602 THASPG 1607
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 HAQPGLVSS 10
HA PG+ S
Sbjct: 771 HASPGVCVS 779
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 HAQPGLVSS 10
HA PG+ S
Sbjct: 771 HASPGVCVS 779
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 THAQPG 6
THA PG
Sbjct: 1609 THAAPG 1614
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 THAQPG 6
THA PG
Sbjct: 1601 THAAPG 1606
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 2 HAQPGLVSS 10
HA PG+ S+
Sbjct: 17 HAFPGISST 25
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 HAQPGLVS 9
HA PG V+
Sbjct: 1930 HANPGTVT 1937
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 HAQPGLVS 9
HA PG V+
Sbjct: 1930 HANPGTVT 1937
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 THAQPGLVSS 10
TH++ GL+ S
Sbjct: 583 THSKAGLLVS 592
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 HAQPGLVS 9
HA PG V+
Sbjct: 1930 HANPGTVT 1937
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 HAQPGLVS 9
HA PG V+
Sbjct: 1930 HANPGTVT 1937
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 THAQPGLVSS 10
TH++ GL+ S
Sbjct: 583 THSKAGLLVS 592
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 4 QPGLVS 9
QPGL++
Sbjct: 39 QPGLIT 44
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 THAQPGLVSS 10
TH++ GL+ S
Sbjct: 583 THSKAGLLVS 592
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 2 HAQPGLVSS 10
HA PG+ S+
Sbjct: 15 HAFPGISST 23
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 HAQPGLVSS 10
H Q GLV S
Sbjct: 1116 HTQGGLVRS 1124
>sp|NSS_PUUMS|NON-STRUCTURAL protein NS-S|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 THAQPG 6
TH +PG
Sbjct: 29 THCKPG 34
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 3 AQPGLVS 9
A+PG+VS
Sbjct: 87 AEPGVVS 93
>sp|POXIN_VACCC|POXIN virus (strain Copenhagen) (VACV)
Query: 2 HAQPGLVSS 10
HA PG+ S+
Sbjct: 17 HAFPGISST 25
>sp|POXIN_VACCA|POXIN virus (strain Ankara) (VACV)
Query: 2 HAQPGLVSS 10
HA PG+ S+
Sbjct: 17 HAFPGISST 25
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 HAQPGLVS 9
HA PG+++
Sbjct: 1892 HANPGVLT 1899
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 HAQPGLVS 9
HA PG ++
Sbjct: 1930 HANPGTIT 1937
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 HAQPGLVSS 10
H Q GLV S
Sbjct: 1118 HQQGGLVRS 1126
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 HAQPGLVSS 10
H Q GLV S
Sbjct: 1118 HQQGGLVRS 1126
218|Sequence|1086|1095|GLVSSSATQY
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 GLVSSSATQY 10
G V SSA QY
Sbjct: 61 GRVVSSALQY 70
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 GLVSSSATQY 10
G V SSA QY
Sbjct: 61 GRVVSSALQY 70
219|Sequence|1091|1100|SATQYGAHEQ
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 1 SATQYGAHEQ 10
+ +YG HE+
Sbjct: 24 AVEEYGDHER 33
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 SATQYGAHEQ 10
+ +YG HE+
Sbjct: 24 AVEEYGDHER 33
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 1 SATQYGAHEQ 10
+ +YG HE+
Sbjct: 24 AVEEYGDHER 33
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 5 YGAHEQ 10
YGAH +
Sbjct: 104 YGAHSE 109
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 5 YGAHEQ 10
YGAH +
Sbjct: 104 YGAHSE 109
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 5 YGAHEQ 10
YGAH +
Sbjct: 104 YGAHSE 109
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 5 YGAHEQ 10
YGAH +
Sbjct: 104 YGAHSE 109
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 5 YGAHEQ 10
YGAH +
Sbjct: 104 YGAHSE 109
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 5 YGAHEQ 10
YGAH +
Sbjct: 104 YGAHSE 109
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 5 YGAHEQ 10
YGAH +
Sbjct: 104 YGAHSE 109
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 5 YGAHEQ 10
YGAH +
Sbjct: 105 YGAHSE 110
220|Sequence|1096|1105|GAHEQTHAMY
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 GAHEQTHA 8
GAHE HA
Sbjct: 512 GAHEWNHA 519
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 2 AHEQTHAM 9
+H+QTH M
Sbjct: 288 SHQQTHNM 295
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 GAHEQTHAM 9
G HE+ H M
Sbjct: 756 GLHEKHHVM 764
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 GAHEQTHAM 9
G HE+ H M
Sbjct: 755 GLHEKHHVM 763
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 GAHEQTHAM 9
G HE+ H M
Sbjct: 755 GLHEKHHVM 763
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 HEQTHAMY 10
+ +TH MY
Sbjct: 423 NHKTHTMY 430
221|Sequence|1101|1110|THAMYACPKL
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 1 THAMYAC 7
TH MYAC
Sbjct: 155 THYMYAC 161
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 5 YACPKL 10
Y CPKL
Sbjct: 178 YECPKL 183
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 5 YACPKL 10
Y CPKL
Sbjct: 178 YECPKL 183
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 5 YACPKL 10
Y CPKL
Sbjct: 178 YECPKL 183
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 5 YACPKL 10
Y CPKL
Sbjct: 178 YECPKL 183
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 5 YACPKL 10
Y CPKL
Sbjct: 177 YECPKL 182
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 5 YACPKL 10
Y CPKL
Sbjct: 176 YECPKL 181
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 5 YACPKL 10
Y CPKL
Sbjct: 105 YECPKL 110
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 5 YACPKL 10
Y CPKL
Sbjct: 178 YECPKL 183
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 5 YACPKL 10
Y CPKL
Sbjct: 178 YECPKL 183
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 5 YACPKL 10
Y CPKL
Sbjct: 178 YECPKL 183
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 5 YACPKL 10
Y CPKL
Sbjct: 178 YECPKL 183
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 5 YACPKL 10
Y CPKL
Sbjct: 171 YLCPKL 176
Query: 1 THAMYACPK 9
T+A Y C K
Sbjct: 373 TYAEYICKK 381
>sp|UL92_HCMVM|UNCHARACTERIZED protein UL92|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HAMYACPK 9
H++YAC +
Sbjct: 24 HSLYACTR 31
>sp|UL92_HCMVA|PROTEIN UL92|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HAMYACPK 9
H++YAC +
Sbjct: 24 HSLYACTR 31
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 5 YACPKL 10
Y CP+L
Sbjct: 169 YECPRL 174
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 HAMYACPK 9
H M CP+
Sbjct: 421 HVMAKCPE 428
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 1 THAMYAC 7
+H MY C
Sbjct: 126 SHRMYLC 132
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 1 THAMYAC 7
+H MY C
Sbjct: 126 SHRMYLC 132
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 6 ACPKL 10
ACPK+
Sbjct: 209 ACPKI 213
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 6 ACPKL 10
ACPK+
Sbjct: 199 ACPKI 203
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 6 ACPKL 10
ACPK+
Sbjct: 209 ACPKI 213
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 6 ACPKL 10
ACPK+
Sbjct: 216 ACPKI 220
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 THAMYACPK 9
T AM+ C K
Sbjct: 115 TCAMFTCKK 123
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 THAMYACPK 9
T AM+ C K
Sbjct: 395 TCAMFTCKK 403
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 THAMYACPK 9
T AM+ C K
Sbjct: 395 TCAMFTCKK 403
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 THAMYACPK 9
T AM+ C K
Sbjct: 395 TCAMFTCKK 403
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 THAMYACPK 9
T AM+ C K
Sbjct: 395 TCAMFTCKK 403
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 THAMYACPK 9
T AM+ C K
Sbjct: 164 TCAMFTCKK 172
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 THAMYACPK 9
T AM+ C K
Sbjct: 395 TCAMFTCKK 403
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 THAMYACPK 9
T AM+ C K
Sbjct: 115 TCAMFTCKK 123
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 THAMYACPK 9
T AM+ C K
Sbjct: 395 TCAMFTCKK 403
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 THAMYACP 8
TH MY P
Sbjct: 426 THTMYKRP 433
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 THAMYACPK 9
T AM+ C K
Sbjct: 115 TCAMFTCQK 123
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 THAMYACPK 9
TH Y C K
Sbjct: 69 THEGYVCAK 77
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 THAMYACPK 9
T AM+ C K
Sbjct: 295 TCAMFTCKK 303
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 HAMYACPK 9
H M CP+
Sbjct: 421 HVMAKCPE 428
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 1 THAMYACPK 9
TH Y C K
Sbjct: 71 THEGYVCAK 79
>sp|UL68_HCMVA|UNCHARACTERIZED protein UL68|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 MYACPKL 10
+Y CP+L
Sbjct: 83 IYTCPRL 89
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 THAMYAC 7
T A+YAC
Sbjct: 301 TGAVYAC 307
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 THAMYAC 7
T A+YAC
Sbjct: 301 TGAVYAC 307
222|Sequence|1106|1115|ACPKLPYNKE
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 ACPKLPYNKE 10
ACP+LP E
Sbjct: 140 ACPQLPCANE 149
>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 PKLPYNKE 10
PKLP N++
Sbjct: 16 PKLPANED 23
>sp|NCAP_VSIVS|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 PKLPYNKE 10
PKLP N++
Sbjct: 16 PKLPANED 23
>sp|NCAP_VSIVN|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 PKLPYNKE 10
PKLP N++
Sbjct: 16 PKLPANED 23
>sp|NCAP_VSIVA|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 PKLPYNKE 10
PKLP N++
Sbjct: 16 PKLPANED 23
>sp|NCAP_VSIVC|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 PKLPYNKE 10
PKLP N++
Sbjct: 16 PKLPANED 23
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 3 PKLPYNKE 10
PKLP N++
Sbjct: 16 PKLPANED 23
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 2 CPKLPYN 8
CP LP++
Sbjct: 593 CPPLPFD 599
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 ACPKLP 6
CPK+P
Sbjct: 666 GCPKIP 671
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 PKLPYNKE 10
P+L Y KE
Sbjct: 20 PELSYQKE 27
>sp|NEC1_HHV7J|NUCLEAR egress protein 1|Human herpesvirus 7 (strain JI)
Query: 6 PYNKE 10
PYNKE
Sbjct: 21 PYNKE 25
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PKLPYNKE 10
PKL Y+K+
Sbjct: 236 PKLRYDKQ 243
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PKLPYNKE 10
PKL Y+K+
Sbjct: 236 PKLRYDKQ 243
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ACPKLPY 7
ACP +P+
Sbjct: 991 ACPSMPF 997
>sp|UL04_HCMVM|ENVELOPE glycoprotein UL4|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PKLPYNKE 10
PKL NKE
Sbjct: 89 PKLQGNKE 96
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ACPKLPY 7
ACP +P+
Sbjct: 914 ACPSMPF 920
223|Sequence|1111|1120|PYNKETSPSF
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 2 YNKETSPS 9
+N+ETSP+
Sbjct: 692 HNRETSPT 699
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PYNKETSPSF 10
P N ET P F
Sbjct: 643 PVNIETEPPF 652
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PYNKETSPSF 10
P N ET P F
Sbjct: 644 PVNIETEPPF 653
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 PYNKETSPS 9
P N +T+PS
Sbjct: 1586 PVNVQTTPS 1594
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 YNKETSPS 9
YN+ TSPS
Sbjct: 452 YNRLTSPS 459
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 YNKETSPS 9
YN+ TSPS
Sbjct: 452 YNRLTSPS 459
>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41
Query: 1 PYNKETSP 8
PY +ETSP
Sbjct: 13 PYLQETSP 20
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 YNKETSPS 9
YN+ TSPS
Sbjct: 452 YNRLTSPS 459
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 YNKETSPS 9
YN+ TSPS
Sbjct: 452 YNRLTSPS 459
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 YNKETSPS 9
YN+ TSPS
Sbjct: 452 YNRLTSPS 459
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 YNKETSPS 9
YN+ TSPS
Sbjct: 452 YNRLTSPS 459
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 YNKETSPS 9
YN+ TSPS
Sbjct: 452 YNRLTSPS 459
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 YNKETSPS 9
YN+ TSPS
Sbjct: 452 YNRLTSPS 459
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 YNKETSPS 9
YN+ TSPS
Sbjct: 452 YNRLTSPS 459
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 YNKETSPS 9
YN+ TSPS
Sbjct: 452 YNRLTSPS 459
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 YNKETSPS 9
YN+ TSPS
Sbjct: 452 YNRLTSPS 459
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 YNKETSPS 9
YN+ TSPS
Sbjct: 431 YNRLTSPS 438
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 1 PYNKETSP 8
PY +ETSP
Sbjct: 13 PYLQETSP 20
>sp|E434_ADE02|EARLY 4 ORF6 protein|Human adenovirus C serotype 2
Query: 1 PYNKETSPSF 10
PY+++ P F
Sbjct: 24 PYSRDRLPPF 33
>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2
Query: 1 PYNKETSP 8
PY+ ET P
Sbjct: 16 PYDTETGP 23
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 1 PYNKETSP 8
PY+ ET P
Sbjct: 16 PYDTETGP 23
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 PYNKETSPSF 10
PY + ++P F
Sbjct: 336 PYCRHSAPCF 345
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PYNKETSP 8
PY ETSP
Sbjct: 295 PYVFETSP 302
>sp|DUT_HHV6Z|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6B (strain
Query: 2 YNKETSPSF 10
+NK+T PS
Sbjct: 308 WNKDTIPSI 316
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 3 NKETSPSF 10
NK+ +P+F
Sbjct: 637 NKQKTPAF 644
>sp|DUT_HHV6U|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 2 YNKETSPSF 10
+NK+T PS
Sbjct: 308 WNKDTIPSI 316
>sp|DUT_HHV6G|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 2 YNKETSPSF 10
+NK+T PS
Sbjct: 308 WNKDTIPSI 316
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 1 PYNKETSPSF 10
P++ + +P F
Sbjct: 546 PFDSDNNPQF 555
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 3 NKETSPSF 10
NK+ +P+F
Sbjct: 636 NKQKTPAF 643
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PYNKETSPS 9
PY E SP+
Sbjct: 525 PYPSEDSPT 533
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 PYNKETSPSF 10
P K+TSP
Sbjct: 1938 PMEKDTSPGL 1947
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PYNKETSPS 9
PY E SP+
Sbjct: 525 PYPSEDSPT 533
>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P
Query: 3 NKETSPSF 10
++ETSP +
Sbjct: 52 SRETSPDY 59
224|Sequence|1116|1125|TSPSFYFAIS
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 SPSFYF 7
SP+FY+
Sbjct: 193 SPAFYY 198
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 SPSFYF 7
SP+FY+
Sbjct: 193 SPAFYY 198
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 SPSFYF 7
SP+FY+
Sbjct: 193 SPAFYY 198
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 SPSFYFAIS 10
+P F FA+S
Sbjct: 266 APRFAFALS 274
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 3 PSFYFAI 9
PSF FA+
Sbjct: 1188 PSFIFAL 1194
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 2 SPSFYFA 8
SP +YFA
Sbjct: 34 SPLYYFA 40
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 TSPSFY 6
T PSFY
Sbjct: 1987 TDPSFY 1992
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 1 TSPSFYFA 8
T+P+FY A
Sbjct: 503 TNPTFYTA 510
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 1 TSPSFYFA 8
T+P+FY A
Sbjct: 503 TNPTFYTA 510
225|Sequence|1121|1130|YFAISTGSLA
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YFAISTGSL 9
YFA++TG +
Sbjct: 212 YFALTTGEI 220
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 1 YFAISTGSL 9
YFA++TG +
Sbjct: 212 YFALTTGEI 220
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 1 YFAISTGSL 9
YFA++TG +
Sbjct: 212 YFALTTGEI 220
>sp|VP7_ROTGA|OUTER capsid glycoprotein VP7|Rotavirus B (isolate
Query: 1 YFAISTG 7
YF ISTG
Sbjct: 154 YFEISTG 160
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 YFAISTGSL 9
YF+ +GSL
Sbjct: 317 YFSTPSGSL 325
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 1 YFAISTG 7
+FA+STG
Sbjct: 209 FFALSTG 215
>sp|Y113_ADE07|UNCHARACTERIZED 11.3 kDa early protein|Human adenovirus B serotype 7
Query: 1 YFAISTG 7
Y AI+TG
Sbjct: 98 YLAIATG 104
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 FAISTGSL 9
FA+ +GSL
Sbjct: 670 FAVKSGSL 677
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 FAISTGSL 9
FA+ +GSL
Sbjct: 670 FAVKSGSL 677
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 YFAISTGSLA 10
YFA TG A
Sbjct: 225 YFAYETGDKA 234
>sp|IORF_CVHOC|PROTEIN I|Human coronavirus OC43 (HCoV-OC43)
Query: 5 STGSLA 10
STGSLA
Sbjct: 125 STGSLA 130
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 YFAISTGSLA 10
YFA TG A
Sbjct: 225 YFAYETGDKA 234
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 YFAISTGSLA 10
YFA TG A
Sbjct: 225 YFAYETGDKA 234
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 YFAISTGSLA 10
YFA TG A
Sbjct: 225 YFAYETGGKA 234
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 YFAISTGSLA 10
YFA TG A
Sbjct: 225 YFAYETGDKA 234
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 1 YFAISTGSLA 10
YFA TG A
Sbjct: 225 YFAYETGDKA 234
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 YFAISTGSL 9
+FA STG +
Sbjct: 265 FFATSTGDV 273
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YFAISTGSL 9
+FA STG +
Sbjct: 265 FFATSTGDV 273
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YFAISTGSL 9
+FA STG +
Sbjct: 265 FFATSTGDV 273
226|Sequence|1126|1135|TGSLAQQYAH
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 GSLAQQYAH 10
G +AQ Y H
Sbjct: 429 GEIAQYYTH 437
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 1 TGSLAQQY 8
TGSL Q Y
Sbjct: 312 TGSLIQAY 319
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 TGSLAQQYAH 10
T +LAQ Y H
Sbjct: 1387 TYTLAQVYNH 1396
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 TGSLAQQYAH 10
T +LAQ Y H
Sbjct: 1387 TYTLAQVYNH 1396
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 GSLAQQYAH 10
G LA Y H
Sbjct: 436 GELASYYTH 444
>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)
Query: 2 GSLAQQYAH 10
G++A+ +AH
Sbjct: 34 GAIARGFAH 42
227|Sequence|1131|1140|QQYAHPNATL
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 3 YAHPN 7
YAHPN
Sbjct: 54 YAHPN 58
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 3 YAHPNA 8
YAHP+A
Sbjct: 529 YAHPDA 534
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 3 YAHPNA 8
YAHP+A
Sbjct: 529 YAHPDA 534
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 QQYAHPN 7
QQY HPN
Sbjct: 190 QQYMHPN 196
>sp|US01_HCMVM|PROTEIN US1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QYAHPNATL 10
+YAHP + L
Sbjct: 44 EYAHPASEL 52
>sp|US01_HCMVA|UNCHARACTERIZED protein HQLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QYAHPNATL 10
+YAHP + L
Sbjct: 44 EYAHPASEL 52
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 2 QYAHPNAT 9
++A+PNAT
Sbjct: 292 EHAYPNAT 299
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 2 QYAHPNAT 9
++A+PNAT
Sbjct: 291 EHAYPNAT 298
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 QYAHPNAT 9
++A+PNAT
Sbjct: 292 EHAYPNAT 299
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QQYAHP 6
Q+Y HP
Sbjct: 74 QEYLHP 79
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 1 QQYAHP 6
Q+Y HP
Sbjct: 74 QEYLHP 79
>sp|PB1F2_I05A1|PROTEIN PB1-F2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 QQYAHPNAT 9
Q+ HPN+T
Sbjct: 28 QRLEHPNST 36
>sp|PB1F2_I97A1|PROTEIN PB1-F2|Influenza A virus (strain A/Hong
Query: 1 QQYAHPNATL 10
Q+ HPN+TL
Sbjct: 28 QRPEHPNSTL 37
228|Sequence|1136|1145|PNATLHPHTP
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 NATLHPHTP 10
N HP TP
Sbjct: 807 NYVFHPETP 815
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 NATLHPHTP 10
NAT HP P
Sbjct: 262 NATFHPGGP 270
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 6 HPHTP 10
HPH+P
Sbjct: 549 HPHSP 553
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 HPHTP 10
HPH+P
Sbjct: 549 HPHSP 553
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 TLHPH 8
TLHPH
Sbjct: 542 TLHPH 546
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 TLHPH 8
TLHPH
Sbjct: 542 TLHPH 546
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PNATLHPHTP 10
PN T H + P
Sbjct: 401 PNQTQHNYAP 410
>sp|EAR_EBVG|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 NATLHP 7
N TLHP
Sbjct: 22 NGTLHP 27
>sp|EAR_EBVB9|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 NATLHP 7
N TLHP
Sbjct: 22 NGTLHP 27
>sp|EAR_EBVA8|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 NATLHP 7
N TLHP
Sbjct: 22 NGTLHP 27
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 TLHPH 8
TLHPH
Sbjct: 542 TLHPH 546
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 1 PNATLHPH 8
P+ T+HPH
Sbjct: 235 PSLTIHPH 242
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 1 PNATLHPH 8
P+ T+HPH
Sbjct: 236 PSLTIHPH 243
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 1 PNATLHPH 8
P+ T+HPH
Sbjct: 236 PSLTIHPH 243
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 5 LHPHTP 10
+HP TP
Sbjct: 324 VHPETP 329
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 2 NATLHPHTP 10
N HPH P
Sbjct: 427 NPVDHPHVP 435
>sp|NCAP_TOSV|NUCLEOPROTEIN virus (Tos)
Query: 1 PNATLHP 7
P A +HP
Sbjct: 147 PRAMMHP 153
>sp|NCAP_PTPV|NUCLEOPROTEIN toro phlebovirus
Query: 1 PNATLHP 7
P A +HP
Sbjct: 140 PRAMMHP 146
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 1 PNATLHPH 8
PN+T+H H
Sbjct: 224 PNSTVHLH 231
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTIHDRTP 154
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 NATLHPHTP 10
N HP TP
Sbjct: 817 NYKYHPSTP 825
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTIHDRTP 154
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTIHDRTP 154
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTIHDRTP 154
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTIHDRTP 154
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTIHDRTP 154
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTIHDRTP 154
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTIHDRTP 154
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTIHDRTP 154
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTIHDRTP 154
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTIHDRTP 154
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTIHDRTP 154
>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 1 PNATLHPH 8
PN+T+H H
Sbjct: 224 PNSTVHLH 231
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTIHDRTP 154
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 6 HPHTP 10
HP TP
Sbjct: 325 HPETP 329
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTIHDRTP 154
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTIHDRTP 154
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTIHDRTP 154
>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)
Query: 6 HPHTP 10
HPHTP
Sbjct: 187 HPHTP 191
>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTVHDRTP 154
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 6 HPHTP 10
HPH P
Sbjct: 423 HPHIP 427
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 2 NATLHPHTP 10
N T+H TP
Sbjct: 146 NDTVHDRTP 154
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 2 NATLHPHTP 10
NAT++ H P
Sbjct: 649 NATIYYHRP 657
>sp|UL140_HCMVM|PROTEIN UL140|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 TLHPH 8
T+HPH
Sbjct: 11 TVHPH 15
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NATLHPHTP 10
NAT++ H P
Sbjct: 649 NATIYYHRP 657
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 2 NATLHPHTP 10
NAT++ H P
Sbjct: 649 NATIYYHRP 657
>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4
Query: 1 PNATLHPHT 9
PN+T +P T
Sbjct: 348 PNSTAYPKT 356
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 2 NATLHPHTP 10
NAT++ H P
Sbjct: 649 NATIYYHRP 657
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 2 NATLHPHTP 10
NAT++ H P
Sbjct: 649 NATIYYHRP 657
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 NATLHPHTP 10
NAT++ H P
Sbjct: 649 NATIYYHRP 657
>sp|VE4_HPV28|PROTEIN E4|Human papillomavirus 28
Query: 3 ATLHPHTP 10
TLH HTP
Sbjct: 79 VTLHVHTP 86
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 4 TLHPHT 9
T+HP+T
Sbjct: 294 TMHPNT 299
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 TLHPH 8
T+HPH
Sbjct: 479 TVHPH 483
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 6 HPHTP 10
HPH P
Sbjct: 406 HPHLP 410
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 HPHTP 10
HPH P
Sbjct: 406 HPHLP 410
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 HPHTP 10
HPH P
Sbjct: 406 HPHLP 410
229|Sequence|1141|1150|HPHTPHPQPS
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 3 HTPHPQP 9
+TPHP+P
Sbjct: 151 YTPHPEP 157
>sp|VL2_HPV67|MINOR capsid protein L2|Human papillomavirus 67
Query: 2 PHTPHPQPS 10
P TP PQPS
Sbjct: 364 PDTPFPQPS 372
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 HTPHP 7
H PHP
Sbjct: 3988 HVPHP 3992
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 HTPHP 7
H PHP
Sbjct: 3988 HVPHP 3992
Query: 3 HTPHPQPS 10
+ P+P PS
Sbjct: 4866 YLPYPDPS 4873
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 1 HPHTPHP 7
HPH+ HP
Sbjct: 448 HPHSAHP 454
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 PHTPHP 7
PHTP P
Sbjct: 475 PHTPIP 480
>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C
Query: 2 PHTPHPQPS 10
P PHP PS
Sbjct: 33 PFGPHPSPS 41
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 PHTPHPQP 9
PH P QP
Sbjct: 1439 PHKPGKQP 1446
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 2 PHTPHPQPS 10
P TP P+PS
Sbjct: 66 PRTPSPRPS 74
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 2 PHTPHPQPS 10
P TP P+PS
Sbjct: 66 PRTPSPRPS 74
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 4 TPHPQP 9
TP+P+P
Sbjct: 164 TPNPRP 169
>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 TPHPQP 9
TP+P+P
Sbjct: 178 TPNPRP 183
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 HTPHPQPS 10
+ P+P PS
Sbjct: 5193 YLPYPNPS 5200
Query: 3 HTPHPQPS 10
+TPH Q S
Sbjct: 2882 YTPHSQIS 2889
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 HTPHPQP 9
+ PHP+P
Sbjct: 151 YEPHPEP 157
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 HPHTPHP 7
H H P+P
Sbjct: 82 HSHIPYP 88
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 HPHTPHP 7
H H P+P
Sbjct: 82 HSHIPYP 88
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 HTPHPQPS 10
+ P+P PS
Sbjct: 5231 YLPYPDPS 5238
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 HTPHPQPS 10
+ P+P PS
Sbjct: 5251 YLPYPDPS 5258
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 HTPHPQPS 10
+ P+P PS
Sbjct: 5281 YLPYPDPS 5288
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 HTPHPQPS 10
+ P+P PS
Sbjct: 4891 YLPYPDPS 4898
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 HPHTPHP 7
H H P+P
Sbjct: 82 HSHIPYP 88
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 HTPHPQPS 10
+ P+P PS
Sbjct: 5220 YLPYPDPS 5227
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 HTPHPQPS 10
+ P+P PS
Sbjct: 5197 YLPYPDPS 5204
>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)
Query: 1 HPHTPHPQ 8
HPHTP P+
Sbjct: 187 HPHTPPPE 194
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 TPHPQP 9
TP P+P
Sbjct: 2850 TPQPKP 2855
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 TPHPQP 9
TP P+P
Sbjct: 2850 TPQPKP 2855
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 TPHPQP 9
TP P+P
Sbjct: 2850 TPQPKP 2855
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 TPHPQP 9
TP P+P
Sbjct: 2850 TPQPKP 2855
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 PHPQPS 10
P+P PS
Sbjct: 5208 PYPDPS 5213
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 1 HPHTPHP 7
HPH HP
Sbjct: 445 HPHVHHP 451
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 3 HTPHPQPS 10
TP PQPS
Sbjct: 656 QTPDPQPS 663
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 1 HPHTPHP 7
HPH HP
Sbjct: 445 HPHVHHP 451
>sp|PG038_VARV|EARLY protein OPG038|Variola virus
Query: 1 HPHTPHPQ 8
+PH HP+
Sbjct: 171 NPHYLHPK 178
>sp|PG038_VAR67|EARLY protein OPG038|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 HPHTPHPQ 8
+PH HP+
Sbjct: 171 NPHYLHPK 178
>sp|PG038_VACCC|EARLY protein OPG038|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HPHTPHPQ 8
+PH HP+
Sbjct: 171 NPHYLHPK 178
>sp|PG038_MONPV|EARLY protein OPG038|Monkeypox virus (MPXV)
Query: 1 HPHTPHPQ 8
+PH HP+
Sbjct: 171 NPHYLHPK 178
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 HTPHPQPS 10
+TPH Q S
Sbjct: 2882 YTPHSQIS 2889
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 1 HPHTPHP 7
HP+ P P
Sbjct: 42 HPNQPEP 48
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 HPHTPHP 7
HP+ P P
Sbjct: 42 HPNQPEP 48
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 1 HPHTPHPQPS 10
H PHP PS
Sbjct: 399 HVRAPHPAPS 408
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 HPHTPHPQPS 10
H HT QP+
Sbjct: 712 HIHTDRGQPA 721
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 HPHTPHPQPS 10
H HT QP+
Sbjct: 713 HIHTDRGQPA 722
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 HTPHPQPS 10
HTPHP S
Sbjct: 904 HTPHPATS 911
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 HTPHPQPS 10
HTPHP S
Sbjct: 904 HTPHPATS 911
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 1 HPHTPHPQ 8
HP PH Q
Sbjct: 432 HPQLPHAQ 439
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 5 PHPQP 9
PHP P
Sbjct: 275 PHPSP 279
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 5 PHPQP 9
PHP P
Sbjct: 275 PHPSP 279
230|Sequence|1146|1155|HPQPSATPTG
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PQPSATPT 9
P+PS TP+
Sbjct: 352 PRPSRTPS 359
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PQPSATPT 9
P+PS TP+
Sbjct: 352 PRPSRTPS 359
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PQPSATPT 9
P+PS TP+
Sbjct: 352 PRPSRTPS 359
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 PQPSATPT 9
PQP PT
Sbjct: 232 PQPLCNPT 239
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 2 PQPSATPT 9
P PS PT
Sbjct: 631 PTPSVKPT 638
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 2 PQPSATPT 9
P PS PT
Sbjct: 631 PTPSVEPT 638
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 2 PQPSATPT 9
P PS PT
Sbjct: 631 PTPSVEPT 638
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 2 PQPSATPT 9
P PS PT
Sbjct: 631 PTPSVEPT 638
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 2 PQPSATPT 9
P PS PT
Sbjct: 631 PTPSVEPT 638
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HPQPSATPTG 10
HP P P G
Sbjct: 213 HPSPGPMPAG 222
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 1 HPQPSATPT 9
HP+PS +P
Sbjct: 451 HPEPSTSPV 459
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HPQPSATPTG 10
HP P P G
Sbjct: 213 HPSPGPMPAG 222
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 2 PQPSATPTG 10
PQ SAT T
Sbjct: 87 PQASATETA 95
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 3 QPSATPT 9
QPS PT
Sbjct: 491 QPSTNPT 497
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 PQPSATPTG 10
P+P TP G
Sbjct: 265 PRPLRTPGG 273
>sp|X_HBVA9|PROTEIN X|Hepatitis B virus genotype A3
Query: 2 PQPSATPT 9
P PSA PT
Sbjct: 40 PSPSAVPT 47
>sp|X_HBVD3|PROTEIN X|Hepatitis B virus genotype D
Query: 2 PQPSATPT 9
P PSA PT
Sbjct: 40 PSPSAVPT 47
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 PQPSATPT 9
P P TP+
Sbjct: 96 PSPDGTPS 103
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 PQPSATPT 9
P P TP+
Sbjct: 96 PSPDGTPS 103
>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19
Query: 1 HPQPSATPTG 10
PQ S TP+G
Sbjct: 327 RPQYSETPSG 336
>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)
Query: 2 PQPSATPTG 10
P+P+A+PT
Sbjct: 221 PRPTASPTA 229
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 HPQPSATP 8
HP P TP
Sbjct: 621 HPMPWGTP 628
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 PQPSATPT 9
PQ +TPT
Sbjct: 1710 PQSRSTPT 1717
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HPQPSATPTG 10
HP P P G
Sbjct: 216 HPIPGPLPAG 225
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HPQPSATPTG 10
HP P P G
Sbjct: 218 HPIPGPLPAG 227
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HPQPSATPTG 10
HP P P G
Sbjct: 218 HPIPGPLPAG 227
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HPQPSATPTG 10
HP P P G
Sbjct: 219 HPIPGPLPAG 228
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HPQPSATPTG 10
HP P P G
Sbjct: 218 HPIPGPLPAG 227
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HPQPSATPTG 10
HP P P G
Sbjct: 218 HPIPGPLPAG 227
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HPQPSATPTG 10
HP P P G
Sbjct: 213 HPIPGPLPAG 222
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HPQPSATPTG 10
HP P P G
Sbjct: 218 HPIPGPLPAG 227
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 1 HPQPSATPTG 10
HP P+ P G
Sbjct: 283 HPTPNEKPNG 292
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HPQPSATPTG 10
HP P P G
Sbjct: 218 HPIPGPLPAG 227
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 HPQPSATPTG 10
H +PS P G
Sbjct: 1212 HQRPSVIPRG 1221
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 HPQPSATPTG 10
H +PS P G
Sbjct: 1212 HQRPSVIPRG 1221
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 HPQPSATPTG 10
H +PS P G
Sbjct: 1212 HQRPSVIPRG 1221
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 HPQPSATPTG 10
H +PS P G
Sbjct: 1212 HQRPSVIPRG 1221
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HPQPSATPTG 10
HP P P G
Sbjct: 218 HPIPGPLPAG 227
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 HPQPSATPTG 10
H +PS P G
Sbjct: 1212 HQRPSVIPRG 1221
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 HPQPSATPTG 10
H +PS P G
Sbjct: 1210 HQRPSVIPRG 1219
231|Sequence|1151|1160|ATPTGQQQSQ
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2864 TPYGQQR 2870
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 TPTGQQQ 8
+P GQQQ
Sbjct: 782 SPYGQQQ 788
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2868 TPYGQQR 2874
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2868 TPYGQQR 2874
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2847 TPFGQQR 2853
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2856 TPFGQQR 2862
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2854 TPFGQQR 2860
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2854 TPFGQQR 2860
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2836 TPFGQQR 2842
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2854 TPFGQQR 2860
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2854 TPFGQQR 2860
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2854 TPFGQQR 2860
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2854 TPFGQQR 2860
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 1 ATPTGQQQSQ 10
ATPTG + +
Sbjct: 270 ATPTGNNKRR 279
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2855 TPFGQQR 2861
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2855 TPFGQQR 2861
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2855 TPFGQQR 2861
>sp|VE8E2_HPV18|PROTEIN E8^E2C|Human papillomavirus type 18
Query: 1 ATPTGQQQSQ 10
ATPTG + +
Sbjct: 76 ATPTGNNKRR 85
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2878 TPFGQQR 2884
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2874 TPFGQQR 2880
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2873 TPFGQQR 2879
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2871 TPFGQQR 2877
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2876 TPFGQQR 2882
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2876 TPFGQQR 2882
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2876 TPFGQQR 2882
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 3 PTGQQQSQ 10
P GQ QSQ
Sbjct: 287 PGGQDQSQ 294
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2877 TPFGQQR 2883
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2869 TPFGQQR 2875
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2876 TPFGQQR 2882
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2869 TPFGQQR 2875
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2878 TPFGQQR 2884
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 TPTGQQQ 8
TP GQQ+
Sbjct: 2877 TPFGQQR 2883
>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 TPTGQ 6
TPTGQ
Sbjct: 23 TPTGQ 27
232|Sequence|1156|1165|QQQSQHGGSH
>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QQQSQHGGSH 10
QQQ Q GSH
Sbjct: 277 QQQPQGRGSH 286
>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QQQSQHGGSH 10
QQQ Q GSH
Sbjct: 277 QQQPQGRGSH 286
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 1 QQQSQHGGSH 10
Q QHGGS
Sbjct: 143 QVDGQHGGSQ 152
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster
Query: 4 SQHGGS 9
S+HGGS
Sbjct: 68 SRHGGS 73
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster
Query: 4 SQHGGS 9
S+HGGS
Sbjct: 68 SRHGGS 73
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 1 QQQSQHGG 8
QQQ +H G
Sbjct: 143 QQQKEHTG 150
>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)
Query: 2 QQSQHGGSH 10
QQ++ G SH
Sbjct: 88 QQTRLGSSH 96
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QQQSQHGGS 9
Q+Q +HGGS
Sbjct: 497 QKQHRHGGS 505
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QQQSQHGGS 9
Q+Q +HGGS
Sbjct: 497 QKQHRHGGS 505
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 SQHGGSH 10
SQ GGS+
Sbjct: 2839 SQRGGSY 2845
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 SQHGGSH 10
SQ GGS+
Sbjct: 2816 SQRGGSY 2822
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 SQHGGSH 10
SQ GGS+
Sbjct: 2839 SQRGGSY 2845
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 SQHGGSH 10
SQ GGS+
Sbjct: 2816 SQRGGSY 2822
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 4 SQHGGSH 10
SQ GG H
Sbjct: 479 SQEGGLH 485
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 SQHGGSH 10
SQ GG H
Sbjct: 551 SQEGGLH 557
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 SQHGGSH 10
SQ GG H
Sbjct: 551 SQEGGLH 557
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 SQHGGSH 10
SQ GG H
Sbjct: 551 SQEGGLH 557
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 SQHGGSH 10
SQ GG H
Sbjct: 551 SQEGGLH 557
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 6 HGGSH 10
HGG H
Sbjct: 95 HGGKH 99
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 6 HGGSH 10
HGG H
Sbjct: 95 HGGKH 99
233|Sequence|1161|1170|HGGSHPAPSP
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 2 GGSHPAP 8
GGSHP P
Sbjct: 482 GGSHPTP 488
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 HGGSHPAPS 9
HGG H APS
Sbjct: 98 HGGRHLAPS 106
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 HGGSHPAPS 9
HGG H APS
Sbjct: 98 HGGRHLAPS 106
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 2 GGSHPAPSP 10
GGS APSP
Sbjct: 138 GGSRVAPSP 146
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 2 GGSHPAPSP 10
GGS APSP
Sbjct: 138 GGSRVAPSP 146
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 HPAPSP 10
HP+P P
Sbjct: 213 HPSPGP 218
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 HPAPSP 10
HP+P P
Sbjct: 213 HPSPGP 218
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 HGGSHPA 7
H G HPA
Sbjct: 183 HKGKHPA 189
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 3 GSHPAP 8
G+HP P
Sbjct: 1739 GTHPLP 1744
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 3 GSHPAP 8
G+HP P
Sbjct: 1738 GTHPLP 1743
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 3 GSHPAP 8
G+HP P
Sbjct: 1738 GTHPLP 1743
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 3 GSHPAP 8
G+HP P
Sbjct: 1738 GTHPLP 1743
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 3 GSHPAP 8
G+HP P
Sbjct: 1738 GTHPLP 1743
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 3 GSHPAP 8
G+HP P
Sbjct: 1738 GTHPLP 1743
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 3 GSHPAP 8
G+HP P
Sbjct: 1738 GTHPLP 1743
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 5 HPAPS 9
HP+PS
Sbjct: 1794 HPSPS 1798
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 3 GSHPAP 8
G+HP P
Sbjct: 1738 GTHPLP 1743
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 GSHPAPSP 10
GSH P P
Sbjct: 870 GSHAFPRP 877
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HGGSHPAPS 9
H G H PS
Sbjct: 83 HKGDHNVPS 91
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HGGSHPAPS 9
H G H PS
Sbjct: 83 HKGDHNVPS 91
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 3 GSHPAP 8
G+HP P
Sbjct: 1738 GTHPLP 1743
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 3 GSHPAP 8
G+HP P
Sbjct: 1738 GTHPLP 1743
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 HGGSHPA 7
H G HPA
Sbjct: 177 HDGEHPA 183
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 HGGSHPA 7
H G HPA
Sbjct: 177 HDGEHPA 183
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 HGGSHPA 7
H G HPA
Sbjct: 177 HDGEHPA 183
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 HGGSHPA 7
H G HPA
Sbjct: 177 HDGEHPA 183
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 3 GSHPAP 8
G+HP P
Sbjct: 1739 GTHPLP 1744
>sp|TAT_HV2RO|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 4 SHPAPSP 10
+HP+P+P
Sbjct: 91 THPSPTP 97
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 SHPAPSP 10
+HP P P
Sbjct: 215 AHPIPGP 221
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 4 SHPAPSP 10
+HP P+P
Sbjct: 570 THPLPAP 576
>sp|US03_HCMVT|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 GSHPAP 8
G HP P
Sbjct: 101 GGHPVP 106
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GSHPAPSP 10
+HP P P
Sbjct: 216 ANHPIPGP 223
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GSHPAPSP 10
HP P P
Sbjct: 216 AQHPIPGP 223
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 HPAPSP 10
HP P P
Sbjct: 218 HPIPGP 223
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 2 GGSHPAPSP 10
GGS PSP
Sbjct: 141 GGSRVVPSP 149
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GSHPAPSP 10
HP P P
Sbjct: 217 AQHPIPGP 224
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 HPAPSP 10
HP P P
Sbjct: 218 HPIPGP 223
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GSHPAPSP 10
HP P P
Sbjct: 216 AQHPIPGP 223
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 HPAPSP 10
HP P P
Sbjct: 218 HPIPGP 223
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 HPAPSP 10
HP P P
Sbjct: 213 HPIPGP 218
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 HPAPSP 10
HP P P
Sbjct: 218 HPIPGP 223
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 1 HGGSHPA 7
GG HPA
Sbjct: 173 QGGRHPA 179
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 HGGSHPAPSP 10
H PAP P
Sbjct: 1758 HAVQEPAPIP 1767
>sp|US25_HCMVA|UNCHARACTERIZED protein US25|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 HPAPSP 10
HPAP+P
Sbjct: 96 HPAPAP 101
234|Sequence|1166|1175|PAPSPVQHHQ
>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 PAPSPVQHH 9
P P QHH
Sbjct: 309 PQAQPFQHH 317
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 PAPSPVQHH 9
P P QHH
Sbjct: 309 PQAQPFQHH 317
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 PAPSPVQHH 9
P P QHH
Sbjct: 309 PQAQPFQHH 317
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 PAPSPVQHH 9
P P QHH
Sbjct: 309 PQAQPFQHH 317
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 PAPSPVQHH 9
P P QHH
Sbjct: 309 PQAQPFQHH 317
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 PAPSPVQHH 9
P P QHH
Sbjct: 309 PQAQPFQHH 317
>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 PAPSPVQHH 9
P P QHH
Sbjct: 309 PQAQPFQHH 317
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 4 SPVQHH 9
SP QHH
Sbjct: 1569 SPFQHH 1574
>sp|EV45_HHV23|ENVELOPE protein UL45|Human herpesvirus 2 (strain 333)
Query: 3 PSPVQHHQ 10
P+PV+H Q
Sbjct: 75 PTPVEHEQ 82
>sp|EV45_HHV2H|ENVELOPE protein UL45|Human herpesvirus 2 (strain HG52)
Query: 3 PSPVQHHQ 10
P+PV+H Q
Sbjct: 75 PTPVEHEQ 82
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 PAPSPVQHH 9
P P P HH
Sbjct: 1770 PFPQPPLHH 1778
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 PAPSPVQHH 9
P P P HH
Sbjct: 1770 PFPQPPLHH 1778
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 PAPSPVQHH 9
P P P HH
Sbjct: 1770 PFPQPPLHH 1778
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 SPVQHH 9
SP+ HH
Sbjct: 1761 SPIHHH 1766
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 SPVQHH 9
SP+ HH
Sbjct: 1761 SPIHHH 1766
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 SPVQHH 9
SP+ HH
Sbjct: 1595 SPIHHH 1600
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 SPVQHH 9
SP+ HH
Sbjct: 1761 SPIHHH 1766
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 SPVQHH 9
SP+ HH
Sbjct: 1761 SPIHHH 1766
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 SPVQHH 9
SP+ HH
Sbjct: 1759 SPIHHH 1764
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 SPVQHH 9
SP+ HH
Sbjct: 1761 SPIHHH 1766
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 SPVQHH 9
SP+ HH
Sbjct: 1762 SPIHHH 1767
>sp|VL2_HPV11|MINOR capsid protein L2|Human papillomavirus 11
Query: 1 PAPSPVQH 8
P P PVQH
Sbjct: 354 PIPDPVQH 361
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 SPVQHH 9
SP+ HH
Sbjct: 1762 SPIHHH 1767
>sp|TRX2_HHV6Z|TRIPLEX capsid protein 2|Human herpesvirus 6B (strain Z29)
Query: 3 PSPVQHH 9
P P HH
Sbjct: 29 PIPAHHH 35
>sp|TRX2_HHV6U|TRIPLEX capsid protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PSPVQHH 9
P P HH
Sbjct: 29 PIPAHHH 35
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 SPVQHH 9
SP+ HH
Sbjct: 1761 SPIYHH 1766
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 2 APSPVQHH 9
AP P Q H
Sbjct: 59 APGPAQRH 66
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 5 PVQHH 9
PV HH
Sbjct: 1036 PVSHH 1040
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 1 PAPSPV 6
P PSPV
Sbjct: 627 PPPSPV 632
>sp|EV45_HHV1K|ENVELOPE protein UL45|Human herpesvirus 1 (strain KOS)
Query: 3 PSPVQHHQ 10
P+P++H Q
Sbjct: 75 PTPMEHEQ 82
>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PAPSPVQHH 9
P+P PVQ
Sbjct: 262 PSPEPVQQQ 270
>sp|EV45_HHV1M|ENVELOPE protein UL45|Human herpesvirus 1 (strain MP)
Query: 3 PSPVQHHQ 10
P+P++H Q
Sbjct: 75 PTPMEHEQ 82
>sp|EV45_HHV11|ENVELOPE protein UL45|Human herpesvirus 1 (strain 17)
Query: 3 PSPVQHHQ 10
P+P++H Q
Sbjct: 75 PTPMEHEQ 82
>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PAPSPVQHH 9
P+P PVQ
Sbjct: 262 PSPEPVQQQ 270
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 PSPVQHH 9
P P HH
Sbjct: 1771 PGPPSHH 1777
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 2 APSPVQHHQ 10
AP+P+Q Q
Sbjct: 499 APAPIQGLQ 507
>sp|75K_PAVHV|UNCHARACTERIZED protein 7.5K|Human parvovirus B19 (strain HV)
Query: 1 PAPSPVQHH 9
P+P PVQ +
Sbjct: 55 PSPGPVQEN 63
235|Sequence|1171|1180|VQHHQHQAAQ
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 QHHQHQ 7
+HH HQ
Sbjct: 1850 KHHSHQ 1855
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 QHHQHQ 7
+HH HQ
Sbjct: 1850 KHHSHQ 1855
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 VQHHQH 6
V HHQH
Sbjct: 3136 VIHHQH 3141
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 VQHHQH 6
V HHQH
Sbjct: 3136 VIHHQH 3141
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 VQHHQH 6
V HHQH
Sbjct: 3136 VIHHQH 3141
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 VQHHQH 6
V HHQH
Sbjct: 3136 VIHHQH 3141
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 VQHHQH 6
V HHQH
Sbjct: 3136 VIHHQH 3141
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 VQHHQHQAA 9
+ HH H+A
Sbjct: 686 INHHWHKAG 694
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 VQHHQHQAA 9
+ HH H+A
Sbjct: 686 INHHWHKAG 694
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 VQHHQHQAA 9
+ HH H+A
Sbjct: 686 INHHWHKAG 694
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 VQHHQHQAA 9
+ HH H+A
Sbjct: 685 INHHWHKAG 693
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 VQHHQHQAA 9
+ HH H+A
Sbjct: 614 INHHWHKAG 622
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 VQHHQHQAA 9
+ HH H+A
Sbjct: 686 INHHWHKAG 694
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 VQHHQHQAA 9
+ HH H+A
Sbjct: 686 INHHWHKAG 694
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 VQHHQHQAA 9
+ HH H+A
Sbjct: 686 INHHWHKAG 694
>sp|VE7_HPVME|PROTEIN E7|Human papillomavirus type ME180
Query: 1 VQHHQHQ 7
V HHQHQ
Sbjct: 46 VNHHQHQ 52
>sp|VU3_HHV7J|PROTEIN U3|Human herpesvirus 7 (strain JI)
Query: 2 QHHQHQAAQ 10
+HH AAQ
Sbjct: 326 KHHTFYAAQ 334
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 3 HHQHQ 7
HH HQ
Sbjct: 144 HHGHQ 148
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 VQHHQHQAA 9
+ HH H++
Sbjct: 683 INHHWHKSG 691
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 VQHHQHQAA 9
+ HH H++
Sbjct: 679 INHHWHKSG 687
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 VQHHQHQAA 9
+ HH H++
Sbjct: 683 INHHWHKSG 691
>sp|NEC1_HHV7J|NUCLEAR egress protein 1|Human herpesvirus 7 (strain JI)
Query: 3 HHQH 6
HHQH
Sbjct: 75 HHQH 78
236|Sequence|1176|1185|HQAAQALHLA
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 HQAAQALH 8
HQ A ALH
Sbjct: 199 HQIASALH 206
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 HQAAQALHLA 10
HQA + +H+A
Sbjct: 164 HQAIKGVHVA 173
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 QALHLA 10
QA+HLA
Sbjct: 1066 QAIHLA 1071
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 QALHLA 10
QA+HLA
Sbjct: 1073 QAIHLA 1078
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 QALHLA 10
QA+HLA
Sbjct: 1072 QAIHLA 1077
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 QALHLA 10
QA+HLA
Sbjct: 1071 QAIHLA 1076
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 QALHLA 10
QA+HLA
Sbjct: 1069 QAIHLA 1074
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 QALHLA 10
QA+HLA
Sbjct: 1062 QAIHLA 1067
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 QALHLA 10
QA+HLA
Sbjct: 1079 QAIHLA 1084
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 QALHLA 10
QA+HLA
Sbjct: 1067 QAIHLA 1072
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 QALHLA 10
QA+HLA
Sbjct: 1062 QAIHLA 1067
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 QALHLA 10
QA+HLA
Sbjct: 1067 QAIHLA 1072
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 QALHLA 10
QA+HLA
Sbjct: 1079 QAIHLA 1084
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 QALHLA 10
QA+HLA
Sbjct: 1068 QAIHLA 1073
237|Sequence|1181|1190|ALHLASPQQQ
>sp|ORF9B_SARS|ORF9B protein|Severe acute respiratory syndrome coronavirus
Query: 1 ALHLASPQQQ 10
ALHL PQ Q
Sbjct: 12 ALHLVDPQIQ 21
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 ALHLASPQ 8
A HLA PQ
Sbjct: 1823 ATHLAGPQ 1830
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 ALHLASPQ 8
A HLA PQ
Sbjct: 1823 ATHLAGPQ 1830
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ALHLASPQQ 9
+LHLA P++
Sbjct: 387 SLHLAKPEE 395
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ALHLASPQQ 9
+LHLA P++
Sbjct: 387 SLHLAKPEE 395
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 HLASPQQ 9
HLA+PQ
Sbjct: 1895 HLATPQS 1901
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 LHLASPQQQ 10
+H+++P Q+
Sbjct: 1163 MHISNPTQE 1171
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ALHLASPQ 8
+LHLA P+
Sbjct: 387 SLHLAQPE 394
238|Sequence|1186|1195|SPQQQSAIYH
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 1 SPQQQSAIYH 10
SP Q+ A+Y+
Sbjct: 341 SPTQKLAVYY 350
239|Sequence|1191|1200|SAIYHAGLAP
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 4 YHAGL 8
YHAGL
Sbjct: 261 YHAGL 265
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 2 AIYHA 6
AIYHA
Sbjct: 13 AIYHA 17
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 AIYHA 6
AIYHA
Sbjct: 13 AIYHA 17
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 HAGLAP 10
HAGL P
Sbjct: 1065 HAGLVP 1070
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 HAGLAP 10
HAGL P
Sbjct: 1065 HAGLVP 1070
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 HAGLAP 10
HAGL P
Sbjct: 1065 HAGLVP 1070
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 HAGLAP 10
HAGL P
Sbjct: 1065 HAGLVP 1070
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 5 HAGLAP 10
HAGL P
Sbjct: 1079 HAGLVP 1084
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 5 HAGLAP 10
HAGL P
Sbjct: 1080 HAGLVP 1085
>sp|ORF4B_MERS1|NON-STRUCTURAL protein ORF4b|Middle East respiratory syndrome-related coronavirus
Query: 2 AIYHAGL 8
++YH+GL
Sbjct: 173 SLYHSGL 179
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 5 HAGLAP 10
HAGL P
Sbjct: 1080 HAGLVP 1085
240|Sequence|1196|1205|AGLAPTPPSM
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 AGLAPTPP 8
+G APTPP
Sbjct: 2093 SGAAPTPP 2100
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 AGLAPTPP 8
+G APTPP
Sbjct: 2092 SGAAPTPP 2099
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 AGLAPTPP 8
+G APTPP
Sbjct: 2092 SGAAPTPP 2099
>sp|PHOSP_RABVR|PHOSPHOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 AGLAPTPPSM 10
A +AP PP++
Sbjct: 175 AQVAPGPPAL 184
>sp|PHOSP_RABVC|PHOSPHOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 AGLAPTPPSM 10
A +AP PP++
Sbjct: 175 AQVAPGPPAL 184
>sp|PHOSP_RABVA|PHOSPHOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 AGLAPTPPSM 10
A +AP PP++
Sbjct: 175 AQVAPGPPAL 184
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GLAPTPP 8
G+APT P
Sbjct: 484 GVAPTKP 490
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 3 LAPTPP 8
L PTPP
Sbjct: 13 LPPTPP 18
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 2 GLAPTPPSM 10
GLA +PP +
Sbjct: 1058 GLAASPPHL 1066
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 GLAPTPPSM 10
GLA +PP +
Sbjct: 1058 GLAASPPHL 1066
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 3 LAPTPP 8
L PTPP
Sbjct: 13 LPPTPP 18
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 APTPPS 9
AP+PPS
Sbjct: 1774 APSPPS 1779
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 3 LAPTPP 8
L PTPP
Sbjct: 13 LPPTPP 18
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 3 LAPTPP 8
L PTPP
Sbjct: 13 LPPTPP 18
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 3 LAPTPP 8
L PTPP
Sbjct: 13 LPPTPP 18
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 3 LAPTPP 8
L PTPP
Sbjct: 13 LPPTPP 18
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 1 AGLAPTPP 8
GLAP PP
Sbjct: 83 VGLAPRPP 90
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 GLAPTPPS 9
GL+PTP S
Sbjct: 1237 GLSPTPQS 1244
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 GLAPTPPS 9
GL+PTP S
Sbjct: 1234 GLSPTPQS 1241
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 GLAPTPPSM 10
GL PT P M
Sbjct: 452 GLTPTAPPM 460
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 1 AGLAPTPP 8
AG++P PP
Sbjct: 254 AGVSPAPP 261
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 1 AGLAPTPP 8
AG++P PP
Sbjct: 254 AGVSPAPP 261
>sp|E1BS_ADE07|E1B protein, small T-antigen|Human adenovirus B serotype 7
Query: 1 AGLAPTPPSM 10
AG+ PP+M
Sbjct: 146 AGILRHPPTM 155
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 AGLAPTP 7
A LAPTP
Sbjct: 465 ASLAPTP 471
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 AGLAPTP 7
A LAPTP
Sbjct: 465 ASLAPTP 471
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 AGLAPTP 7
A LAPTP
Sbjct: 465 ASLAPTP 471
>sp|UNG_EBVB9|URACIL-DNA glycosylase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PTPPSM 10
P PPS+
Sbjct: 110 PVPPSL 115
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 PTPPS 9
PTPP+
Sbjct: 184 PTPPA 188
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 AGLAPTPPSM 10
+G APTPP +
Sbjct: 2783 SGPAPTPPRV 2792
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 GLAPTP 7
G+APTP
Sbjct: 2778 GIAPTP 2783
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GLAPTP 7
G+APTP
Sbjct: 2805 GIAPTP 2810
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 GLAPTP 7
G+APTP
Sbjct: 2783 GIAPTP 2788
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PTPPSM 10
PT PSM
Sbjct: 403 PTSPSM 408
241|Sequence|1201|1210|TPPSMTPASN
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 PPSMTPASN 10
PP+MTPA N
Sbjct: 297 PPNMTPAVN 305
>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 PPSMTPASN 10
PP+MTPA N
Sbjct: 297 PPNMTPAVN 305
>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 PPSMTPASN 10
PP+MTPA N
Sbjct: 297 PPNMTPAVN 305
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 2 PPSMTPASN 10
PP+MTPA N
Sbjct: 297 PPNMTPAVN 305
>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 2 PPSMTPASN 10
PP+MTPA N
Sbjct: 297 PPNMTPAVN 305
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 PPSMTPASN 10
PP+MTPA N
Sbjct: 297 PPNMTPAVN 305
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 PPSMTPASN 10
PP+MTPA N
Sbjct: 297 PPNMTPAVN 305
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 PPSMTPASN 10
PP+MTPA N
Sbjct: 297 PPNMTPAVN 305
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 TPPSMTPASN 10
TPP + PAS+
Sbjct: 687 TPPVIAPASS 696
>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 PPSMTPA 8
PP+MTPA
Sbjct: 297 PPNMTPA 303
>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 2 PPSMTPA 8
PP+MTPA
Sbjct: 297 PPNMTPA 303
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 TPPSMTPAS 9
TPP + PA+
Sbjct: 2302 TPPDLRPAT 2310
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 2 PPSMTPA 8
PP+MTPA
Sbjct: 297 PPNMTPA 303
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 PPSMTPA 8
PP+MTPA
Sbjct: 297 PPNMTPA 303
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 2 PPSMTPA 8
PPS TPA
Sbjct: 624 PPSPTPA 630
>sp|NS1_INCGL|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Great
Query: 3 PSMTPAS 9
P+MTPAS
Sbjct: 72 PTMTPAS 78
>sp|NS1_INCTA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Taylor/1233/1947)
Query: 3 PSMTPAS 9
P+MTPAS
Sbjct: 72 PTMTPAS 78
>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)
Query: 3 PSMTPAS 9
P+MTPAS
Sbjct: 72 PTMTPAS 78
>sp|NS1_INCJH|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 PSMTPAS 9
P+MTPAS
Sbjct: 72 PTMTPAS 78
>sp|NS1_INCAA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Ann
Query: 3 PSMTPAS 9
P+MTPAS
Sbjct: 77 PTMTPAS 83
>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)
Query: 3 PSMTPAS 9
P+MTPAS
Sbjct: 77 PTMTPAS 83
>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)
Query: 3 PSMTPAS 9
P+MTPAS
Sbjct: 77 PTMTPAS 83
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PPSMTPAS 9
P SMTP S
Sbjct: 598 PKSMTPGS 605
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 1 TPPSMTPAS 9
TPP + PAS
Sbjct: 684 TPPVIAPAS 692
>sp|VP6_ROTHS|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 PPSMTPA 8
PP+MTP+
Sbjct: 297 PPNMTPS 303
>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 PPSMTPA 8
PP+MTP+
Sbjct: 297 PPNMTPS 303
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 1 TPPSMT 6
TPP+MT
Sbjct: 146 TPPAMT 151
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 TPPSMT 6
TPP+MT
Sbjct: 146 TPPAMT 151
>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 2 PPSMTP 7
PP+MTP
Sbjct: 297 PPNMTP 302
242|Sequence|1206|1215|TPASNTQSPQ
>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P
Query: 1 TPASNTQSPQ 10
TPAS+TQS Q
Sbjct: 473 TPASSTQSIQ 482
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 2 PASNTQSPQ 10
P SNT PQ
Sbjct: 544 PGSNTNQPQ 552
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 1 TPASNTQSP 9
TP+ N +SP
Sbjct: 472 TPSKNNESP 480
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 1 TPASNTQSP 9
T ASN Q+P
Sbjct: 731 TAASNEQTP 739
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PASNTQSPQ 10
PA+NTQ Q
Sbjct: 171 PAANTQHSQ 179
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 TPASNTQSPQ 10
TPA+ T PQ
Sbjct: 652 TPATQTPDPQ 661
243|Sequence|1211|1220|TQSPQNSFPA
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 TQSPQNSFP 9
T+ PQ S+P
Sbjct: 1344 TRLPQRSWP 1352
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 TQSPQNSFPA 10
+Q PQN+ PA
Sbjct: 103 SQPPQNTAPA 112
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TQSPQNSFPA 10
Q PQ ++PA
Sbjct: 401 VQEPQVTYPA 410
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TQSPQNSFPA 10
Q PQ ++PA
Sbjct: 401 VQEPQVTYPA 410
244|Sequence|1216|1225|NSFPAAQQTV
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 NSFPAAQQTV 10
N F AA+Q V
Sbjct: 411 NRFRAAEQQV 420
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 NSFPAAQQTV 10
+ FPA +TV
Sbjct: 1730 DDFPARNETV 1739
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 1 NSFPAAQ 7
+SFPAA+
Sbjct: 316 DSFPAAR 322
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 NSFPAAQ 7
+SFPAA+
Sbjct: 316 DSFPAAR 322
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 NSFPAAQ 7
+SFPAA+
Sbjct: 316 DSFPAAR 322
245|Sequence|1221|1230|AQQTVFTIHP
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 AQQTVFTIHP 10
AQ TVF HP
Sbjct: 1993 AQPTVFVKHP 2002
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 AQQTVFTIHP 10
AQ TVF HP
Sbjct: 1971 AQPTVFVKHP 1980
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 AQQTVFTIHP 10
AQ TVF HP
Sbjct: 1966 AQPTVFVKHP 1975
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 TVFTIHP 10
T++ +HP
Sbjct: 5244 TIYKLHP 5250
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 TVFTIHP 10
T+F +HP
Sbjct: 329 TLFPLHP 335
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 TVFTIHP 10
T+F +HP
Sbjct: 329 TLFPLHP 335
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 TVFTIHP 10
T+F +HP
Sbjct: 329 TLFPLHP 335
246|Sequence|1226|1235|FTIHPSHVQP
>sp|US06_HCMVM|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 3 IHPSH 7
IHPSH
Sbjct: 113 IHPSH 117
>sp|US06_HCMVT|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 IHPSH 7
IHPSH
Sbjct: 114 IHPSH 118
>sp|US06_HCMVA|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 IHPSH 7
IHPSH
Sbjct: 114 IHPSH 118
>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P
Query: 3 IHPSHV 8
IHPSH+
Sbjct: 32 IHPSHI 37
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 FTIHPSHV 8
F I+P H+
Sbjct: 899 FPINPKHI 906
>sp|VE7_HPV12|PROTEIN E7|Human papillomavirus 12
Query: 1 FTIHPSHVQP 10
FT+ S +QP
Sbjct: 11 FTLELSELQP 20
>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)
Query: 1 FTIHPSHVQ 9
FT H +H+Q
Sbjct: 73 FTSHNNHLQ 81
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 IHPSHVQ 9
IH HVQ
Sbjct: 3137 IHHQHVQ 3143
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 IHPSHVQ 9
IH HVQ
Sbjct: 3137 IHHQHVQ 3143
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 IHPSHVQ 9
IH HVQ
Sbjct: 3137 IHHQHVQ 3143
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 IHPSHVQ 9
IH HVQ
Sbjct: 3137 IHHQHVQ 3143
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 IHPSHVQ 9
IH HVQ
Sbjct: 3137 IHHQHVQ 3143
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 FTIHPSHVQP 10
FTI+ + V+P
Sbjct: 1068 FTIYLNFVEP 1077
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 2 TIHPSHVQP 10
+ PS+VQP
Sbjct: 174 SCKPSNVQP 182
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 IHPSHVQ 9
+HP HVQ
Sbjct: 590 LHPHHVQ 596
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 IHPSHVQ 9
+HP HVQ
Sbjct: 590 LHPHHVQ 596
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 TIHPSHVQP 10
T H S+VQP
Sbjct: 609 TGHTSNVQP 617
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 TIHPSHVQP 10
T H S+VQP
Sbjct: 609 TGHTSNVQP 617
>sp|VE7_HPV25|PROTEIN E7|Human papillomavirus 25
Query: 1 FTIHPSHVQP 10
FT+ S +QP
Sbjct: 11 FTLELSELQP 20
247|Sequence|1231|1240|SHVQPAYTNP
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 1 SHVQPAYTNP 10
+H+ PA+T+P
Sbjct: 161 THLNPAFTDP 170
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 HVQPAYTN 9
+V PAYTN
Sbjct: 479 YVDPAYTN 486
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 HVQPAYTN 9
+V PAYTN
Sbjct: 479 YVDPAYTN 486
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 HVQPAYTN 9
+V PAYTN
Sbjct: 479 YVDPAYTN 486
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 2 HVQPAYTNP 10
H+QP Y+ P
Sbjct: 294 HMQPLYSAP 302
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 2 HVQPAYTNP 10
H+QP Y+ P
Sbjct: 294 HMQPLYSAP 302
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 2 HVQPAYTN 9
++ PAYTN
Sbjct: 474 YIDPAYTN 481
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SHVQPAY 7
SH PAY
Sbjct: 673 SHTSPAY 679
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SHVQPAY 7
SH PAY
Sbjct: 672 SHTSPAY 678
>sp|UL28_HCMVA|UNCHARACTERIZED protein UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SHVQPAY 7
SH PAY
Sbjct: 351 SHTSPAY 357
>sp|VL2_HPV39|MINOR capsid protein L2|Human papillomavirus 39
Query: 1 SHVQPAYTNP 10
S+ PA+T+P
Sbjct: 156 SYTNPAFTDP 165
>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58
Query: 1 SHVQPAYTNP 10
+H+ P++T P
Sbjct: 157 THLNPSFTEP 166
>sp|GD_CHV1|ENVELOPE glycoprotein D|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 2 HVQPAYTNP 10
HVQP NP
Sbjct: 63 HVQPFVENP 71
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 5 PAYTNP 10
P Y+NP
Sbjct: 2004 PVYSNP 2009
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 5 PAYTNP 10
P Y+NP
Sbjct: 2004 PVYSNP 2009
>sp|VL2_HPV54|MINOR capsid protein L2|Human papillomavirus type 54
Query: 1 SHVQPAYTNP 10
SH P YT P
Sbjct: 156 SHDNPIYTEP 165
>sp|UL92_HCMVM|UNCHARACTERIZED protein UL92|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HVQPAYT 8
HVQ A+T
Sbjct: 12 HVQNAFT 18
>sp|UL92_HCMVA|PROTEIN UL92|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HVQPAYT 8
HVQ A+T
Sbjct: 12 HVQNAFT 18
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SHVQPAYT 8
SHV PA T
Sbjct: 796 SHVSPAQT 803
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SHVQPAYT 8
SHV PA T
Sbjct: 796 SHVSPAQT 803
>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62
Query: 3 VQPAYTNP 10
+ PAYT P
Sbjct: 158 LNPAYTEP 165
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 1 SHVQPAYTNP 10
S V P +T+P
Sbjct: 156 SFVNPLFTDP 165
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 HVQPAYTNP 10
H QP T P
Sbjct: 325 HSQPINTRP 333
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 HVQPAYTNP 10
H PA+ NP
Sbjct: 1234 HRSPAWPNP 1242
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 VQPAYTNP 10
V+PA+T P
Sbjct: 463 VEPAHTTP 470
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 1 SHVQPAYTNP 10
+HV P Y P
Sbjct: 121 AHVPPPYVEP 130
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 HVQPAYTNP 10
H QP T P
Sbjct: 324 HSQPLNTRP 332
248|Sequence|1236|1245|AYTNPPHMAH
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 YTNPPHMAH 10
YT PP M+H
Sbjct: 24 YTGPPPMSH 32
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 YTNPPHMAH 10
YT PP M+H
Sbjct: 24 YTGPPPMSH 32
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 2 YTNPPHMAH 10
YT PP M+H
Sbjct: 24 YTGPPPMSH 32
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 YTNPPH 7
Y NPPH
Sbjct: 679 YYNPPH 684
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 YTNPPH 7
Y NPPH
Sbjct: 679 YYNPPH 684
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 YTNPPH 7
Y NPPH
Sbjct: 679 YYNPPH 684
Query: 4 NPPH 7
NPPH
Sbjct: 506 NPPH 509
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 YTNPPH 7
Y NPPH
Sbjct: 679 YYNPPH 684
Query: 4 NPPH 7
NPPH
Sbjct: 506 NPPH 509
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 YTNPPH 7
Y NPPH
Sbjct: 680 YYNPPH 685
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 YTNPPH 7
Y NPPH
Sbjct: 680 YYNPPH 685
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 TNPPHM 8
T PPHM
Sbjct: 147 TTPPHM 152
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 AYTNPPHM 8
+YTN PH+
Sbjct: 204 SYTNLPHV 211
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 TNPPHM 8
T PPHM
Sbjct: 147 TTPPHM 152
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TNPPH 7
+NPPH
Sbjct: 608 SNPPH 612
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TNPPH 7
+NPPH
Sbjct: 609 SNPPH 613
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TNPPH 7
+NPPH
Sbjct: 602 SNPPH 606
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TNPPH 7
+NPPH
Sbjct: 608 SNPPH 612
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TNPPH 7
+NPPH
Sbjct: 608 SNPPH 612
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TNPPH 7
+NPPH
Sbjct: 608 SNPPH 612
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TNPPH 7
+NPPH
Sbjct: 608 SNPPH 612
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TNPPH 7
+NPPH
Sbjct: 608 SNPPH 612
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 TNPPHM 8
TN PHM
Sbjct: 3329 TNNPHM 3334
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 TNPPHM 8
TN PHM
Sbjct: 3329 TNNPHM 3334
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 TNPPHM 8
TN PHM
Sbjct: 3329 TNNPHM 3334
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 TNPPHM 8
TN PHM
Sbjct: 3329 TNNPHM 3334
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 TNPPHM 8
TN PHM
Sbjct: 3329 TNNPHM 3334
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 TNPPHM 8
TN PHM
Sbjct: 3329 TNNPHM 3334
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 AYTNPPHM 8
A+TN PH+
Sbjct: 203 AFTNLPHV 210
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TNPPH 7
+NPPH
Sbjct: 608 SNPPH 612
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TNPPH 7
+NPPH
Sbjct: 608 SNPPH 612
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 AYTNPPHM 8
A+TN PH+
Sbjct: 203 AFTNLPHV 210
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 YTNPPHMA 9
+ NPPH A
Sbjct: 1795 FRNPPHPA 1802
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 YTNPPHMA 9
+ NPPH A
Sbjct: 1795 FRNPPHPA 1802
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 PPHMAH 10
P H+AH
Sbjct: 2106 PSHLAH 2111
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 PPHMAH 10
P H+AH
Sbjct: 2106 PSHLAH 2111
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 PPHMAH 10
P H+AH
Sbjct: 2106 PSHLAH 2111
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 PPHMAH 10
P H+AH
Sbjct: 2106 PSHLAH 2111
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 AYTNPPHM 8
+YTN PH+
Sbjct: 173 SYTNLPHV 180
Query: 3 TNPPHMAH 10
TNP M H
Sbjct: 83 TNPTKMVH 90
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 PPHMAH 10
P H+AH
Sbjct: 2106 PSHLAH 2111
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 3 TNPPHM 8
+ PPHM
Sbjct: 146 STPPHM 151
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 5 PPHMAH 10
PPH+AH
Sbjct: 375 PPHVAH 380
>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 YTNPP 6
Y NPP
Sbjct: 114 YNNPP 118
>sp|YVBC_VACCC|UNCHARACTERIZED 10.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 NPPHMAH 10
N PHMA+
Sbjct: 20 NRPHMAY 26
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 YTNPPHMAH 10
YT PP +A
Sbjct: 1855 YTQPPGVAR 1863
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TNPPH 7
+NPPH
Sbjct: 112 SNPPH 116
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TNPPH 7
+NPPH
Sbjct: 608 SNPPH 612
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TNPPH 7
+NPPH
Sbjct: 587 SNPPH 591
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 YTNPP 6
YT+PP
Sbjct: 507 YTDPP 511
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 YTNPP 6
YT+PP
Sbjct: 507 YTDPP 511
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 YTNPP 6
YT+PP
Sbjct: 507 YTDPP 511
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 AYTNP 5
AYTNP
Sbjct: 1098 AYTNP 1102
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 TNPPHM 8
T+PPH+
Sbjct: 2180 TDPPHI 2185
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 YTNPPHM 8
Y N PH+
Sbjct: 920 YINNPHL 926
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 YTNPPHM 8
Y N PH+
Sbjct: 920 YINNPHL 926
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 4 NPPH 7
NPPH
Sbjct: 1520 NPPH 1523
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 YTNPP 6
YT+PP
Sbjct: 77 YTSPP 81
249|Sequence|1241|1250|PHMAHVPQAH
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 MAHVPQAH 10
MA+V QAH
Sbjct: 643 MAYVNQAH 650
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 MAHVPQAH 10
MA+V QAH
Sbjct: 639 MAYVNQAH 646
>sp|MATRX_ISFV|MATRIX protein|Isfahan virus (ISFV)
Query: 1 PHMAHVPQ 8
P M HVP+
Sbjct: 149 PPMMHVPE 156
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 1 PHMAHVPQA 9
PH HVP++
Sbjct: 686 PHSQHVPES 694
>sp|SHDAG_HDVS1|SMALL delta antigen|Hepatitis delta virus genotype II
Query: 1 PHMAHVPQA 9
P MA VP++
Sbjct: 169 PQMAGVPES 177
>sp|SHDAG_HDV83|SMALL delta antigen|Hepatitis delta virus genotype II
Query: 1 PHMAHVPQA 9
P MA VP++
Sbjct: 169 PQMAGVPES 177
>sp|SHDAG_HDVS2|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 1 PHMAHVPQA 9
P MA VP++
Sbjct: 169 PQMAGVPES 177
>sp|LHDAG_HDVS1|LARGE delta antigen|Hepatitis delta virus genotype II
Query: 1 PHMAHVPQA 9
P MA VP++
Sbjct: 169 PQMAGVPES 177
>sp|LHDAG_HDV83|LARGE delta antigen|Hepatitis delta virus genotype II
Query: 1 PHMAHVPQA 9
P MA VP++
Sbjct: 169 PQMAGVPES 177
>sp|LHDAG_HDVS2|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 1 PHMAHVPQA 9
P MA VP++
Sbjct: 169 PQMAGVPES 177
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PHMAHVPQ 8
PH+A PQ
Sbjct: 418 PHLAANPQ 425
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PHMAHVPQ 8
PH+A PQ
Sbjct: 418 PHLAANPQ 425
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 PHMAHVPQA 9
P++AH P
Sbjct: 338 PYLAHCPDC 346
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 PHMAHVPQA 9
P++AH P
Sbjct: 338 PYLAHCPDC 346
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 PHMAHVPQA 9
P++AH P
Sbjct: 338 PYLAHCPDC 346
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PHMAHVP 7
P M H+P
Sbjct: 675 PQMGHIP 681
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 PHMAHVPQA 9
P++AH P
Sbjct: 339 PYLAHCPDC 347
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 PHMAHVPQA 9
P++AH P
Sbjct: 339 PYLAHCPDC 347
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 PHMAHVPQA 9
P++AH P
Sbjct: 339 PYLAHCPDC 347
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 PHMAHVPQA 9
P++AH P
Sbjct: 339 PYLAHCPDC 347
250|Sequence|1246|1255|VPQAHVQSGM
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 VPQAHVQSGM 10
+PQ H++ G+
Sbjct: 1212 MPQGHIRRGL 1221
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PQAHVQSGM 10
P+AHV G+
Sbjct: 1115 PRAHVDLGV 1123
251|Sequence|1251|1260|VQSGMVPSHP
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 QSGMVPSH 9
Q+G+VPSH
Sbjct: 1278 QAGVVPSH 1285
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 QSGMVPSH 9
Q G+VPSH
Sbjct: 1281 QVGVVPSH 1288
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 VQSGMVPSHP 10
VQ+G++ +HP
Sbjct: 1635 VQNGVITTHP 1644
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 QSGMVPSH 9
+ G+VPSH
Sbjct: 1268 EMGIVPSH 1275
>sp|E3_YLDV|PROTEIN E3 homolog|Yaba-like disease virus (YLDV)
Query: 5 MVPSHP 10
MVPS+P
Sbjct: 61 MVPSNP 66
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 VQSGMVPSHP 10
++ ++P+HP
Sbjct: 74 LEKKIIPNHP 83
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 QSGMVPSH 9
QSG++P H
Sbjct: 231 QSGLLPFH 238
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VQSGMVPSH 9
V G+VPS+
Sbjct: 638 VDKGIVPSY 646
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 VQSGMVPSHP 10
++ ++P HP
Sbjct: 74 MEKKIIPDHP 83
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 VQSGMVPSHP 10
++ ++P HP
Sbjct: 74 LEKKVIPDHP 83
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 5 MVPSHP 10
++P+HP
Sbjct: 20 VIPNHP 25
>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)
Query: 2 QSGMVPSH 9
Q G+ P+H
Sbjct: 14 QGGVYPAH 21
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 QSGMVPSH 9
Q G+ P+H
Sbjct: 14 QGGVYPAH 21
>sp|RNB_HHV2H|PROBABLE RNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 SGMVPSHP 10
SG+ P+HP
Sbjct: 3 SGVSPAHP 10
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 2 QSGMVPS 8
+SGM+PS
Sbjct: 491 RSGMLPS 497
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 GMVPSH 9
GMVP H
Sbjct: 349 GMVPLH 354
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 QSGMVPSH 9
Q+G++P H
Sbjct: 231 QNGLLPFH 238
252|Sequence|1256|1265|VPSHPTAHAP
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VPSHPTAH 8
VP HPTA+
Sbjct: 311 VPDHPTAN 318
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VPSHPTAH 8
VP HPTA+
Sbjct: 311 VPDHPTAN 318
>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)
Query: 4 HPTAHA 9
HPTAHA
Sbjct: 357 HPTAHA 362
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 VPSHPTAHA 9
+P+HPT +
Sbjct: 79 IPNHPTGKS 87
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 3 SHPTAH 8
SHP AH
Sbjct: 1660 SHPEAH 1665
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 VPSHPTAHAP 10
VP+HP A P
Sbjct: 499 VPAHPGARCP 508
>sp|LRP1_HHV1F|LATENCY-RELATED protein 1|Human herpesvirus 1 (strain F)
Query: 1 VPSHPTAHAP 10
P+HP +HAP
Sbjct: 28 TPTHPHSHAP 37
Query: 1 VPSHPTAHAP 10
P+HP +HAP
Sbjct: 60 TPTHPHSHAP 69
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PSHPTA 7
P+HP+A
Sbjct: 457 PAHPSA 462
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 2 PSHPTAHAP 10
PS P A P
Sbjct: 527 PSEPAASLP 535
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VPSHPT 6
+P HPT
Sbjct: 19 IPVHPT 24
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VPSHPT 6
+P HPT
Sbjct: 19 IPVHPT 24
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VPSHPT 6
+P HPT
Sbjct: 19 IPVHPT 24
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 VPSHPTAHAP 10
VP+HP P
Sbjct: 499 VPAHPGTRCP 508
253|Sequence|1261|1270|TAHAPMMLMT
***** No hits found ******
254|Sequence|1266|1275|MMLMTTQPPG
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 MMLMTTQPPG 10
++LMT PPG
Sbjct: 1806 LVLMTATPPG 1815
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 MMLMTTQPPG 10
++LMT PPG
Sbjct: 1806 LVLMTATPPG 1815
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 MMLMTTQPPG 10
++LMT PPG
Sbjct: 1806 LVLMTATPPG 1815
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 MMLMTTQPPG 10
++LMT PPG
Sbjct: 1806 LVLMTATPPG 1815
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 MMLMTTQPPG 10
++LMT PPG
Sbjct: 1806 LVLMTATPPG 1815
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 MMLMTTQPPG 10
++LMT PPG
Sbjct: 1808 LVLMTATPPG 1817
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 MMLMTTQPPG 10
++LMT PPG
Sbjct: 1808 LVLMTATPPG 1817
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 MMLMTTQPPG 10
++LMT PPG
Sbjct: 1806 LVLMTATPPG 1815
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 MMLMTTQPPG 10
++LMT PPG
Sbjct: 1807 LVLMTATPPG 1816
>sp|VE8E2_HPV47|PROTEIN E8^E2C|Human papillomavirus 47
Query: 1 MMLMTTQPPG 10
M+L+++ PPG
Sbjct: 5 MLLLSSTPPG 14
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 MLMTTQPPG 10
+LMT PPG
Sbjct: 1801 ILMTATPPG 1809
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 MLMTTQPPG 10
+LMT PPG
Sbjct: 1801 ILMTATPPG 1809
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 MLMTTQPPG 10
+LMT PPG
Sbjct: 1801 ILMTATPPG 1809
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 MLMTTQPPG 10
+LMT PPG
Sbjct: 1801 ILMTATPPG 1809
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 MLMTTQPPG 10
+LMT PPG
Sbjct: 1801 ILMTATPPG 1809
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 MLMTTQPPG 10
+LMT PPG
Sbjct: 1801 ILMTATPPG 1809
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 MLMTTQPPG 10
+LMT PPG
Sbjct: 1801 ILMTATPPG 1809
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 MLMTTQPPG 10
+LMT PPG
Sbjct: 1801 ILMTATPPG 1809
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 MLMTTQPPG 10
+LMT PPG
Sbjct: 1807 VLMTATPPG 1815
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 MLMTTQPPG 10
+LMT PPG
Sbjct: 1801 ILMTATPPG 1809
>sp|VE8E2_HPV05|PROTEIN E8^E2C|Human papillomavirus 5
Query: 1 MMLMTTQPPG 10
M+L+++ PPG
Sbjct: 5 MLLLSSTPPG 14
>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60
Query: 2 MLMTTQPPG 10
M+M T PPG
Sbjct: 451 MIMPTIPPG 459
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LMTTQP 8
L+TTQP
Sbjct: 187 LLTTQP 192
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LMTTQP 8
L+TTQP
Sbjct: 187 LLTTQP 192
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 MMLMTTQPP 9
M+L T+PP
Sbjct: 537 MLLNNTRPP 545
>sp|TEG3_VZVO|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 LMTTQPP 9
++TT PP
Sbjct: 152 MLTTHPP 158
>sp|TEG3_VZVD|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LMTTQPP 9
++TT PP
Sbjct: 152 MLTTHPP 158
255|Sequence|1271|1280|TQPPGGPQAA
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 PPGGP 7
PPGGP
Sbjct: 716 PPGGP 720
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 PPGGP 7
PPGGP
Sbjct: 716 PPGGP 720
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 PPGGP 7
PPGGP
Sbjct: 717 PPGGP 721
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 PPGGP 7
PPGGP
Sbjct: 717 PPGGP 721
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 PPGGPQAA 10
PPGGP A
Sbjct: 716 PPGGPIPA 723
Query: 3 PPGGPQAA 10
PPG P ++
Sbjct: 531 PPGTPNSS 538
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 PPGGP 7
PPGGP
Sbjct: 716 PPGGP 720
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 PPGGP 7
PPGGP
Sbjct: 720 PPGGP 724
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 PPGGP 7
PPGGP
Sbjct: 717 PPGGP 721
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 PPGGP 7
PPGGP
Sbjct: 717 PPGGP 721
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 PPGGP 7
PPGGP
Sbjct: 715 PPGGP 719
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 PPGGPQA 9
PPGG A
Sbjct: 15 PPGGASA 21
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 PPGGPQA 9
PP GP A
Sbjct: 695 PPEGPSA 701
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 PPGGPQA 9
PP GP A
Sbjct: 695 PPEGPSA 701
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 TQPPGGP 7
T+ PGGP
Sbjct: 2 TKKPGGP 8
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 TQPPGGP 7
T+ PGGP
Sbjct: 2 TKKPGGP 8
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 TQPPGGP 7
T+ PGGP
Sbjct: 2 TKKPGGP 8
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 TQPPGGP 7
T+ PGGP
Sbjct: 2 TKKPGGP 8
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 TQPPGGP 7
T+ PGGP
Sbjct: 2 TKKPGGP 8
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 TQPPGGP 7
T+ PGGP
Sbjct: 2 TKKPGGP 8
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 TQPPGGP 7
T+ PGGP
Sbjct: 2 TKKPGGP 8
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 TQPPGGP 7
T+ PGGP
Sbjct: 2 TKKPGGP 8
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 PPGGPQ 8
PPG PQ
Sbjct: 1594 PPGRPQ 1599
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 TQPPGGPQA 9
T+PP P+A
Sbjct: 1771 TEPPSEPEA 1779
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 PPGGPQ 8
PPG PQ
Sbjct: 1594 PPGRPQ 1599
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 TQPPGG 6
T PPGG
Sbjct: 68 TAPPGG 73
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 PPGGPQAA 10
PP PQ A
Sbjct: 532 PPSTPQTA 539
Query: 3 PPGGP 7
PPG P
Sbjct: 719 PPGAP 723
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 PPGGPQAA 10
PP PQ A
Sbjct: 532 PPNTPQTA 539
Query: 3 PPGGP 7
PPG P
Sbjct: 719 PPGAP 723
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PPGGPQ 8
PPG PQ
Sbjct: 428 PPGTPQ 433
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TQPPGGPQ 8
T PP GP
Sbjct: 13 TTPPHGPH 20
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 TQPPGGPQ 8
T PP GP
Sbjct: 13 TTPPHGPH 20
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 PPGGP 7
PPGGP
Sbjct: 717 PPGGP 721
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 PPGGP 7
PPGGP
Sbjct: 714 PPGGP 718
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 PPGGPQAA 10
PPG P+ +
Sbjct: 737 PPGAPRPS 744
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 4 PGGPQAA 10
PGGP AA
Sbjct: 2354 PGGPDAA 2360
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 PPGGP 7
PPGGP
Sbjct: 716 PPGGP 720
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 PPGGP 7
PPGGP
Sbjct: 460 PPGGP 464
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 PPGGP 7
PPGGP
Sbjct: 460 PPGGP 464
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 PPGGP 7
PPGGP
Sbjct: 715 PPGGP 719
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 PPGGP 7
PPGGP
Sbjct: 715 PPGGP 719
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 PPGGP 7
PPGGP
Sbjct: 715 PPGGP 719
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 PPGGP 7
PPGGP
Sbjct: 460 PPGGP 464
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 PPGGP 7
PPG P
Sbjct: 714 PPGAP 718
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 2 QPPGGPQ 8
PPGGP+
Sbjct: 200 DPPGGPR 206
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPGGP 7
PPG P
Sbjct: 48 PPGSP 52
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPGGP 7
PPG P
Sbjct: 48 PPGSP 52
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 PPGGPQ 8
PPG P+
Sbjct: 743 PPGAPR 748
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 TQPPGGP 7
++ PGGP
Sbjct: 2 SKKPGGP 8
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 TQPPGGP 7
++ PGGP
Sbjct: 2 SKKPGGP 8
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 TQPPGGP 7
++ PGGP
Sbjct: 2 SKKPGGP 8
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 TQPPGGP 7
++ PGGP
Sbjct: 2 SKKPGGP 8
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 PPGGP 7
PPG P
Sbjct: 714 PPGAP 718
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TQPPGGPQAA 10
T+PP PQA+
Sbjct: 636 TEPPLTPQAS 645
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TQPPGGPQAA 10
T+PP PQA+
Sbjct: 637 TEPPLTPQAS 646
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 TQPPGGPQA 9
T+PP P+A
Sbjct: 1771 TEPPLEPEA 1779
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 TQPPGGP 7
++ PGGP
Sbjct: 2 SKKPGGP 8
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 TQPPGGP 7
++ PGGP
Sbjct: 2 SKKPGGP 8
>sp|UL56_HHV2H|PROTEIN UL56|Human herpesvirus 2 (strain HG52)
Query: 1 TQPPGG 6
T+PPGG
Sbjct: 157 TEPPGG 162
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 PPGGP 7
PPG P
Sbjct: 721 PPGAP 725
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 QPPGGPQAA 10
Q GGP AA
Sbjct: 20 QEAGGPSAA 28
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 PPGGP 7
PPG P
Sbjct: 740 PPGAP 744
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 PPGGP 7
PPG P
Sbjct: 725 PPGAP 729
256|Sequence|1276|1285|GPQAALAQSA
***** No hits found ******
257|Sequence|1281|1290|LAQSALQPIP
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LAQSALQPIP 10
LAQ A QP+P
Sbjct: 162 LAQCAEQPLP 171
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LAQSALQPIP 10
LAQ A +P+P
Sbjct: 168 LAQCAERPLP 177
258|Sequence|1286|1295|LQPIPVSTTA
>sp|VPU_HV1B8|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 LQPIPVST 8
+QPIP+ T
Sbjct: 1 MQPIPIVT 8
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 QPIPVST 8
+PIP+ST
Sbjct: 2603 EPIPMST 2609
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 QPIPVST 8
+PIP+ST
Sbjct: 2603 EPIPMST 2609
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 QPIPVST 8
+PIP+ST
Sbjct: 2603 EPIPMST 2609
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 QPIPVST 8
+PIP+ST
Sbjct: 2603 EPIPMST 2609
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 QPIPVST 8
+PIP+ST
Sbjct: 2600 EPIPMST 2606
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 QPIPVST 8
+PIP+ST
Sbjct: 2603 EPIPMST 2609
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 QPIPVST 8
+PIP+ST
Sbjct: 2603 EPIPMST 2609
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 QPIPVST 8
+P+P+ST
Sbjct: 2602 EPVPMST 2608
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 QPIPVST 8
+P+P+ST
Sbjct: 2602 EPVPMST 2608
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 QPIPVST 8
+P+P+ST
Sbjct: 2602 EPVPMST 2608
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 QPIPVST 8
+P+P+ST
Sbjct: 2602 EPVPMST 2608
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 QPIPVST 8
+P+P+ST
Sbjct: 2602 EPVPMST 2608
>sp|VPU_HV1H2|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 LQPIP 5
+QPIP
Sbjct: 1 MQPIP 5
>sp|VE7_HPV07|PROTEIN E7|Human papillomavirus 7
Query: 1 LQPIPVSTTA 10
LQP PVS +
Sbjct: 15 LQPEPVSLSC 24
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 QPIPV 6
QPIPV
Sbjct: 253 QPIPV 257
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 QPIPVSTTA 10
+P PVST A
Sbjct: 486 RPAPVSTIA 494
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 QPIPV 6
QPIPV
Sbjct: 253 QPIPV 257
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QPIPVS 7
QPIP+S
Sbjct: 78 QPIPLS 83
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 QPIPVS 7
QPIP+S
Sbjct: 78 QPIPLS 83
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QPIPVS 7
QPIP+S
Sbjct: 78 QPIPLS 83
259|Sequence|1291|1300|VSTTAHFPYM
>sp|E3145_ADE06|EARLY E3B 14 kDa protein|Human adenovirus C serotype 6
Query: 6 HFPY 9
HFPY
Sbjct: 102 HFPY 105
>sp|E3145_ADE02|EARLY 3 14.7 kDa protein|Human adenovirus C serotype 2
Query: 6 HFPY 9
HFPY
Sbjct: 102 HFPY 105
>sp|NSP4_ROTAM|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|NSP4_ROTWI|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate RVA/Human/United
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|NSP4_ROT41|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|NSP4_ROTH4|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|NSP4_ROTH5|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|NSP4_ROTHP|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|NSP4_ROTHD|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|NSP4_ROTHV|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|NSP4_ROTAD|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|NSP4_ROTHS|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|NSP4_ROTH6|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 AHFPYM 10
AH PY+
Sbjct: 1713 AHIPYL 1718
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VSTTAHFP 8
+ T HFP
Sbjct: 576 IGCTLHFP 583
>sp|NSP4_ROTKU|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|NSP4_ROTH3|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|NSP4_ROTHT|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|NSP4_ROTHL|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|NSP4_ROTYO|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|NSP4_ROTH7|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate RVA/Human/United
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|NSP4_ROTH1|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|NSP4_ROTH2|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 5 AHFPYM 10
A+FPY+
Sbjct: 31 AYFPYI 36
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 AHFPYM 10
AH PY+
Sbjct: 1713 AHVPYL 1718
260|Sequence|1296|1305|HFPYMTHPSV
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FPYMTHPS 9
PY THPS
Sbjct: 689 LPYSTHPS 696
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 2 FPYMTHPS 9
PY THPS
Sbjct: 405 LPYSTHPS 412
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 2 FPYMTHP 8
PY+THP
Sbjct: 542 LPYITHP 548
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 2 FPYMTHPS 9
PY THP+
Sbjct: 689 LPYSTHPA 696
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 2 FPYMTHP 8
FPY T+P
Sbjct: 724 FPYATNP 730
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 HFPYMTHPSV 10
FP++ HP++
Sbjct: 2115 QFPFLIHPTM 2124
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 HFPYMTHPSV 10
FP++ HP++
Sbjct: 2115 QFPFLIHPTM 2124
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 HFPYMTHPSV 10
FP++ HP++
Sbjct: 2115 QFPFLIHPTM 2124
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 HFPYMTHPSV 10
FP++ HP++
Sbjct: 2115 QFPFLIHPTM 2124
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 HFPYMTHPSV 10
FP++ HP++
Sbjct: 2115 QFPFLIHPTM 2124
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 HFPYMTHP 8
FP++ HP
Sbjct: 2101 QFPFLVHP 2108
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 HFPYMTHP 8
FP++ HP
Sbjct: 2100 QFPFLIHP 2107
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FPYMTHP 8
FPY T+P
Sbjct: 724 FPYATNP 730
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 2 FPYMTHP 8
FPY T+P
Sbjct: 724 FPYATNP 730
>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)
Query: 1 HFPYMTH 7
+FP+++H
Sbjct: 296 NFPWLSH 302
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 1 HFPYMTH 7
+FP+++H
Sbjct: 296 NFPWLSH 302
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HFPYMTH 7
+FP+++H
Sbjct: 296 NFPWLSH 302
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 HFPYMTH 7
+FP+++H
Sbjct: 296 NFPWLSH 302
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HFPYMTH 7
+FP+++H
Sbjct: 296 NFPWLSH 302
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 1 HFPYMTH 7
+FP+++H
Sbjct: 296 NFPWLSH 302
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 MTHPSV 10
+THPSV
Sbjct: 139 LTHPSV 144
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2104 QYPFLVHP 2111
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2125 QYPFLVHP 2132
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2107 QYPFLVHP 2114
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2107 QYPFLVHP 2114
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2115 QYPFLVHP 2122
>sp|PG027_VARV|INTERFERON antagonist OPG027|Variola virus
Query: 3 PYMTHPSV 10
PY+ HP +
Sbjct: 134 PYIEHPLI 141
>sp|PG027_VAR67|INTERFERON antagonist OPG027|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 PYMTHPSV 10
PY+ HP +
Sbjct: 134 PYIEHPLI 141
>sp|PG027_VACCC|INTERFERON antagonist OPG027|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PYMTHPSV 10
PY+ HP +
Sbjct: 134 PYIEHPLI 141
>sp|PG027_VACCA|INTERFERON antagonist OPG027|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PYMTHPSV 10
PY+ HP +
Sbjct: 134 PYIEHPLI 141
>sp|PG027_MONPZ|INTERFERON antagonist OPG027|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 3 PYMTHPSV 10
PY+ HP +
Sbjct: 134 PYIEHPLI 141
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 HFPYMTHPSV 10
HFP TH ++
Sbjct: 613 HFPTSTHGAL 622
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2109 QYPFLVHP 2116
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2115 QYPFLVHP 2122
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2118 QYPFLVHP 2125
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2106 QYPFLVHP 2113
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2105 QYPFLVHP 2112
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2107 QYPFLVHP 2114
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2117 QYPFLVHP 2124
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2106 QYPFLVHP 2113
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2123 QYPFLVHP 2130
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2113 QYPFLVHP 2120
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2105 QYPFLVHP 2112
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 FPYMTHPSV 10
FP +HP V
Sbjct: 258 FPIGSHPRV 266
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2116 QYPFLVHP 2123
>sp|NEF_HV2G1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 4 YMTHPS 9
Y+THP+
Sbjct: 192 YLTHPA 197
>sp|PG027_MONPV|INTERFERON antagonist OPG027|Monkeypox virus (MPXV)
Query: 3 PYMTHPSV 10
PY+ HP +
Sbjct: 134 PYIEHPLI 141
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 FPYMTH 7
+ YMTH
Sbjct: 5955 YDYMTH 5960
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 HFPYMTHP 8
+P++ HP
Sbjct: 2116 QYPFLIHP 2123
>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23
Query: 2 FPYMTHPSV 10
F Y HPS+
Sbjct: 501 FDYYLHPSL 509
>sp|US36_HCMVA|UNCHARACTERIZED protein US36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PYMTHPSV 10
PY HP+V
Sbjct: 61 PYFIHPTV 68
>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7
Query: 1 HFPYMTHPSV 10
H P T PSV
Sbjct: 162 HNPIFTDPSV 171
261|Sequence|1301|1313|THPSVQAHHQQQL
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 SVQAHHQ 10
S+ AHHQ
Sbjct: 3284 SIHAHHQ 3290
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 SVQAHHQ 10
S+ AHHQ
Sbjct: 3284 SIHAHHQ 3290
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 SVQAHHQ 10
S+ AHHQ
Sbjct: 3284 SIHAHHQ 3290
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 SVQAHHQ 10
S+ AHHQ
Sbjct: 3284 SIHAHHQ 3290
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 SVQAHHQ 10
S+ AHHQ
Sbjct: 3284 SIHAHHQ 3290
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 SVQAHHQ 10
S+ AHHQ
Sbjct: 3288 SIHAHHQ 3294
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 SVQAHHQ 10
S+ AHHQ
Sbjct: 3287 SIHAHHQ 3293
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 SVQAHHQ 10
S+ AHHQ
Sbjct: 3288 SIHAHHQ 3294
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 SVQAHHQ 10
S+ AHHQ
Sbjct: 3286 SIHAHHQ 3292
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 SVQAHHQ 10
S+ AHHQ
Sbjct: 3286 SIHAHHQ 3292
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 SVQAHHQ 10
S+ AHHQ
Sbjct: 3286 SIHAHHQ 3292
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 SVQAHHQ 10
S+ AHHQ
Sbjct: 3286 SIHAHHQ 3292
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 SVQAHHQ 10
S+ AHHQ
Sbjct: 3286 SIHAHHQ 3292
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HPSVQAH 8
+PSVQAH
Sbjct: 505 NPSVQAH 511
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 3 PSVQAHHQQQL 13
P VQA QQL
Sbjct: 41 PIVQAQQMQQL 51
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 3 PSVQAHHQQQL 13
P VQA QQL
Sbjct: 41 PIVQAQQMQQL 51
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 2 HPSVQAHHQQ 11
H SVQA +Q
Sbjct: 274 HASVQAEMEQ 283
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 HPSVQAHHQQ 11
HP+VQ HQ
Sbjct: 262 HPTVQYAHQN 271
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 2 HPSVQAHHQQ 11
H SVQA +Q
Sbjct: 274 HASVQAEMEQ 283
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 1 THPSVQAHHQQQ 12
TH Q H+ QQ
Sbjct: 421 THSMTQDHNLQQ 432
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 2 HPSVQAHHQQ 11
H SVQA +Q
Sbjct: 274 HASVQAEMEQ 283
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 2 HPSVQAHHQQ 11
H SVQA +Q
Sbjct: 274 HASVQAEMEQ 283
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 3 PSVQAHHQQ 11
PS+Q+ +QQ
Sbjct: 211 PSIQSKYQQ 219
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 3 PSVQAHHQQ 11
PS+Q+ +QQ
Sbjct: 211 PSIQSKYQQ 219
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 HPSVQAHHQ 10
HPS H Q
Sbjct: 301 HPSTSQHEQ 309
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 PSVQAHHQ 10
PS+QAH Q
Sbjct: 1618 PSLQAHLQ 1625
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 PSVQAHHQ 10
PS+QAH Q
Sbjct: 1618 PSLQAHLQ 1625
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 PSVQAHHQ 10
PS+QAH Q
Sbjct: 1618 PSLQAHLQ 1625
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 THPSVQAHHQQQL 13
TH S A + QQ+
Sbjct: 5777 THESSSAVNMQQI 5789
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 7 AHHQQQL 13
A+H QQL
Sbjct: 1967 AYHDQQL 1973
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 THPSVQAHHQ 10
T ++QAH++
Sbjct: 578 TETAIQAHYK 587
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 THPSVQAHHQ 10
T ++QAH++
Sbjct: 578 TETAIQAHYK 587
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 THPSVQAHHQ 10
T ++QAH++
Sbjct: 578 TETAIQAHYK 587