1|Sequence|1|10|MRSAAAAPRS
***** No hits found ******
2|Sequence|6|15|AAPRSPAVAT
***** No hits found ******
3|Sequence|11|20|PAVATESRRF
***** No hits found ******
4|Sequence|16|25|ESRRFAAARW
***** No hits found ******
5|Sequence|21|30|AAARWPGWRS
>sp|ENO_SOLM1|ENOLASE magneticus (strain ATCC 700980
Query: 1 AAARWPGWRS 10
A + WPGW++
Sbjct: 289 AESDWPGWKT 298
6|Sequence|26|35|PGWRSLQRPA
>sp|YAHJ_ECOLI|UNCHARACTERIZED protein YahJ|Escherichia coli (strain K12)
Query: 3 WRSLQRPA 10
WRSL RPA
Sbjct: 133 WRSLNRPA 140
7|Sequence|31|40|LQRPARRSGR
***** No hits found ******
8|Sequence|36|45|RRSGRGGGGA
***** No hits found ******
9|Sequence|41|50|GGGGAAPGPY
***** No hits found ******
10|Sequence|46|55|APGPYPSAAP
***** No hits found ******
11|Sequence|51|60|PSAAPPPPGP
>sp|CIKA_SYNY3|CIRCADIAN input-output histidine kinase CikA|Synechocystis sp. (strain ATCC
Query: 1 PSAAPPPPGP 10
PS+ PPPGP
Sbjct: 44 PSSLKPPPGP 53
12|Sequence|56|65|PPPGPGPPPS
>sp|RPOA_KORVE|DNA-DIRECTED RNA polymerase subunit alpha|Koribacter versatilis (strain
Query: 1 PPPGPGPPPS 10
PPPG P PS
Sbjct: 325 PPPGSQPAPS 334
13|Sequence|61|70|GPPPSRQSSP
***** No hits found ******
14|Sequence|66|75|RQSSPPSASD
***** No hits found ******
15|Sequence|71|80|PSASDCFGSN
***** No hits found ******
16|Sequence|76|85|CFGSNGNGGG
***** No hits found ******
17|Sequence|81|90|GNGGGAFRPG
>sp|AMPA_BUCAP|PROBABLE cytosol aminopeptidase|Buchnera aphidicola subsp. Schizaphis
Query: 3 GGGAFRPG 10
GG AFRPG
Sbjct: 328 GGNAFRPG 335
18|Sequence|86|95|AFRPGSRRLL
***** No hits found ******
19|Sequence|91|100|SRRLLGLGGP
***** No hits found ******
20|Sequence|96|105|GLGGPPRPFV
***** No hits found ******
21|Sequence|101|110|PRPFVVLLLP
***** No hits found ******
22|Sequence|106|115|VLLLPLASPG
***** No hits found ******
23|Sequence|111|120|LASPGAPPAA
***** No hits found ******
24|Sequence|116|125|APPAAPTRAS
***** No hits found ******
25|Sequence|121|130|PTRASPLGAR
***** No hits found ******
26|Sequence|126|135|PLGARASPPR
***** No hits found ******
27|Sequence|131|140|ASPPRSGVSL
***** No hits found ******
28|Sequence|136|145|SGVSLARPAP
***** No hits found ******
29|Sequence|141|150|ARPAPGCPRP
***** No hits found ******
30|Sequence|146|155|GCPRPACEPV
>sp|TOP1_TREPA|DNA topoisomerase 1|Treponema pallidum (strain Nichols)
Query: 2 CPRPACE 8
CPRPAC+
Sbjct: 628 CPRPACD 634
31|Sequence|151|160|ACEPVYGPLT
***** No hits found ******
32|Sequence|156|165|YGPLTMSLKP
>sp|MUTS2_THET8|ENDONUCLEASE MutS2|Thermus thermophilus (strain ATCC 27634
Query: 2 GPLTMSLKP 10
GPL MSLKP
Sbjct: 634 GPLKMSLKP 642
33|Sequence|161|170|MSLKPQQQQQ
***** No hits found ******
34|Sequence|166|175|QQQQQQQQQQ
***** No hits found ******
35|Sequence|171|180|QQQQQQQQQQ
***** No hits found ******
36|Sequence|176|185|QQQQQQQQQQ
***** No hits found ******
37|Sequence|181|190|QQQQQQQQPP
***** No hits found ******
38|Sequence|186|195|QQQPPPAAAN
***** No hits found ******
39|Sequence|191|200|PAAANVRKPG
***** No hits found ******
40|Sequence|196|205|VRKPGGSGLL
***** No hits found ******
41|Sequence|201|210|GSGLLASPAA
***** No hits found ******
42|Sequence|206|215|ASPAAAPSPS
***** No hits found ******
43|Sequence|211|220|APSPSSSSVS
***** No hits found ******
44|Sequence|216|225|SSSVSSSSAT
***** No hits found ******
45|Sequence|221|230|SSSATAPSSV
***** No hits found ******
46|Sequence|226|235|APSSVVAATS
***** No hits found ******
47|Sequence|231|240|VAATSGGGRP
***** No hits found ******
48|Sequence|236|245|GGGRPGLGRG
***** No hits found ******
49|Sequence|241|250|GLGRGRNSNK
***** No hits found ******
50|Sequence|246|255|RNSNKGLPQS
***** No hits found ******
51|Sequence|251|260|GLPQSTISFD
***** No hits found ******
52|Sequence|256|265|TISFDGIYAN
>sp|ARLY_SYNS3|ARGININOSUCCINATE lyase|Synechococcus sp. (strain CC9311)
Query: 2 ISFDGIYAN 10
+ FDGIYAN
Sbjct: 224 LGFDGIYAN 232
53|Sequence|261|270|GIYANMRMVH
***** No hits found ******
54|Sequence|266|275|MRMVHILTSV
***** No hits found ******
55|Sequence|271|280|ILTSVVGSKC
>sp|ENO_RHOP5|ENOLASE palustris (strain BisA53)
Query: 2 LTSVVGSKC 10
LT +VGSKC
Sbjct: 299 LTDIVGSKC 307
56|Sequence|276|285|VGSKCEVQVK
***** No hits found ******
57|Sequence|281|290|EVQVKNGGIY
>sp|Y2248_MYCTU|UNCHARACTERIZED protein Rv2248|Mycobacterium tuberculosis (strain ATCC 25618
Query: 1 EVQVKNGGI 9
+VQVKNGG+
Sbjct: 7 DVQVKNGGL 15
>sp|Y2248_MYCTO|UNCHARACTERIZED protein MT2308|Mycobacterium tuberculosis (strain CDC 1551
Query: 1 EVQVKNGGI 9
+VQVKNGG+
Sbjct: 7 DVQVKNGGL 15
58|Sequence|286|295|NGGIYEGVFK
***** No hits found ******
59|Sequence|291|300|EGVFKTYSPK
***** No hits found ******
60|Sequence|296|305|TYSPKCDLVL
***** No hits found ******
61|Sequence|301|310|CDLVLDAAHE
***** No hits found ******
62|Sequence|306|315|DAAHEKSTES
***** No hits found ******
63|Sequence|311|320|KSTESSSGPK
***** No hits found ******
64|Sequence|316|325|SSGPKREEIM
***** No hits found ******
65|Sequence|321|330|REEIMESILF
***** No hits found ******
66|Sequence|326|335|ESILFKCSDF
***** No hits found ******
67|Sequence|331|340|KCSDFVVVQF
***** No hits found ******
68|Sequence|336|345|VVVQFKDMDS
***** No hits found ******
69|Sequence|341|350|KDMDSSYAKR
***** No hits found ******
70|Sequence|346|355|SYAKRDAFTD
***** No hits found ******
71|Sequence|351|360|DAFTDSAISA
***** No hits found ******
72|Sequence|356|365|SAISAKVNGE
***** No hits found ******
73|Sequence|361|370|KVNGEHKEKD
***** No hits found ******
74|Sequence|366|375|HKEKDLEPWD
>sp|RECF_MOOTA|DNA replication and repair protein|Moorella thermoacetica (strain ATCC
Query: 2 KEKDLEPWD 10
KE +LEPWD
Sbjct: 175 KEGELEPWD 183
75|Sequence|371|380|LEPWDAGELT
***** No hits found ******
76|Sequence|376|385|AGELTANEEL
***** No hits found ******
77|Sequence|381|390|ANEELEALEN
***** No hits found ******
78|Sequence|386|395|EALENDVSNG
***** No hits found ******
79|Sequence|391|400|DVSNGWDPND
>sp|MNME_SYNR3|TRNA modification GTPase MnmE|Synechococcus sp. (strain RCC307)
Query: 1 DVSNGWDPND 10
D+S GW P+D
Sbjct: 312 DLSRGWSPDD 321
>sp|SLEB_BACSU|SPORE cortex-lytic enzyme|Bacillus subtilis (strain 168)
Query: 1 DVSNGWDPND 10
D NGWDP++
Sbjct: 264 DAINGWDPSE 273
>sp|MNME_PROMA|TRNA modification GTPase MnmE|Prochlorococcus marinus (strain SARG /
Query: 1 DVSNGWDPND 10
D+S GW+ ND
Sbjct: 314 DLSKGWNKND 323
>sp|NQRF_CHLFF|NA(+)-TRANSLOCATING NADH-quinone reductase subunit F|Chlamydia felis (strain Fe/C-56)
Query: 1 DVSNGWDPND 10
D+++GWD ND
Sbjct: 362 DIASGWDKND 371
80|Sequence|396|405|WDPNDMFRYN
>sp|AKNOX_STRGJ|ACLACINOMYCIN-N/ACLACINOMYCIN-A oxidase|Streptomyces galilaeus
Query: 1 WDPNDMFRY 9
WDP D+FR+
Sbjct: 529 WDPRDVFRH 537
81|Sequence|401|410|MFRYNEENYG
***** No hits found ******
82|Sequence|406|415|EENYGVVSTY
***** No hits found ******
83|Sequence|411|420|VVSTYDSSLS
***** No hits found ******
84|Sequence|416|425|DSSLSSYTVP
***** No hits found ******
85|Sequence|421|430|SYTVPLERDN
>sp|ACKA_SHEPA|ACETATE kinase|Shewanella pealeana (strain ATCC 700345
Query: 1 SYTVPLER 8
SYTVPLER
Sbjct: 315 SYTVPLER 322
>sp|Y041_SYNY3|PUTATIVE methyl-accepting chemotaxis protein sll0041|Synechocystis sp.
Query: 1 SYTVPLERDN 10
S TVPL RDN
Sbjct: 433 SLTVPLHRDN 442
86|Sequence|426|435|LERDNSEEFL
***** No hits found ******
87|Sequence|431|440|SEEFLKREAR
***** No hits found ******
88|Sequence|436|445|KREARANQLA
***** No hits found ******
89|Sequence|441|450|ANQLAEEIES
***** No hits found ******
90|Sequence|446|455|EEIESSAQYK
***** No hits found ******
91|Sequence|451|460|SAQYKARVAL
***** No hits found ******
92|Sequence|456|465|ARVALENDDR
***** No hits found ******
93|Sequence|461|470|ENDDRSEEEK
***** No hits found ******
94|Sequence|466|475|SEEEKYTAVQ
***** No hits found ******
95|Sequence|471|480|YTAVQRNSSE
***** No hits found ******
96|Sequence|476|485|RNSSEREGHS
***** No hits found ******
97|Sequence|481|490|REGHSINTRE
***** No hits found ******
98|Sequence|486|495|INTRENKYIP
***** No hits found ******
99|Sequence|491|500|NKYIPPGQRN
***** No hits found ******
100|Sequence|496|505|PGQRNREVIS
***** No hits found ******
101|Sequence|501|510|REVISWGSGR
>sp|TRUB_PROMT|TRNA pseudouridine synthase B|Prochlorococcus marinus (strain NATL2A)
Query: 2 EVISWGSGR 10
E+ISW SGR
Sbjct: 246 EIISWRSGR 254
>sp|TRUB_PROM1|TRNA pseudouridine synthase B|Prochlorococcus marinus (strain NATL1A)
Query: 2 EVISWGSGR 10
E+ISW SGR
Sbjct: 246 EIISWRSGR 254
>sp|FLAV_MARSD|FLAVODOXIN salexigens (strain ATCC 14822
Query: 2 EVISWGSG 9
E++SWGSG
Sbjct: 134 EIVSWGSG 141
102|Sequence|506|515|WGSGRQNSPR
***** No hits found ******
103|Sequence|511|520|QNSPRMGQPG
>sp|FENR_PSEAE|FERREDOXIN--NADP reductase|Pseudomonas aeruginosa (strain ATCC 15692
Query: 3 SPRMGQPG 10
SPRMG+PG
Sbjct: 240 SPRMGEPG 247
>sp|FENR_AZOVI|FERREDOXIN--NADP reductase|Azotobacter vinelandii
Query: 3 SPRMGQPG 10
SPRMG+PG
Sbjct: 240 SPRMGEPG 247
104|Sequence|516|525|MGQPGSGSMP
***** No hits found ******
105|Sequence|521|530|SGSMPSRSTS
***** No hits found ******
106|Sequence|526|535|SRSTSHTSDF
***** No hits found ******
107|Sequence|531|540|HTSDFNPNSG
***** No hits found ******
108|Sequence|536|545|NPNSGSDQRV
***** No hits found ******
109|Sequence|541|550|SDQRVVNGGV
***** No hits found ******
110|Sequence|546|555|VNGGVPWPSP
>sp|T1S1_ECOLX|TYPE I restriction enzyme EcoR124I/EcoR124II|Escherichia coli
Query: 2 NGGVPWPSP 10
NG +PW SP
Sbjct: 228 NGSIPWISP 236
111|Sequence|551|560|PWPSPCPSPS
>sp|YCGK_PSEVC|UNCHARACTERIZED HTH-type transcriptional regulator in|Pseudoalteromonas
Query: 1 PWPSPCPS 8
PWP PC S
Sbjct: 34 PWPVPCKS 41
>sp|FTSH_MYCTU|ATP-DEPENDENT zinc metalloprotease FtsH|Mycobacterium tuberculosis (strain ATCC
Query: 1 PWPSPCPSPS 10
PWP P P P+
Sbjct: 641 PWPQPVPEPA 650
>sp|FTSH_MYCTO|ATP-DEPENDENT zinc metalloprotease FtsH|Mycobacterium tuberculosis (strain CDC
Query: 1 PWPSPCPSPS 10
PWP P P P+
Sbjct: 641 PWPQPVPEPA 650
>sp|FTSH_MYCTA|ATP-DEPENDENT zinc metalloprotease FtsH|Mycobacterium tuberculosis (strain ATCC
Query: 1 PWPSPCPSPS 10
PWP P P P+
Sbjct: 641 PWPQPVPEPA 650
>sp|FTSH_MYCBO|ATP-DEPENDENT zinc metalloprotease FtsH|Mycobacterium bovis (strain ATCC BAA-935
Query: 1 PWPSPCPSPS 10
PWP P P P+
Sbjct: 641 PWPQPVPEPA 650
>sp|FTSH_MYCLE|ATP-DEPENDENT zinc metalloprotease FtsH|Mycobacterium leprae (strain TN)
Query: 1 PWPSPCPSPS 10
PWP P P P+
Sbjct: 641 PWPQPVPEPA 650
112|Sequence|556|565|CPSPSSRPPS
***** No hits found ******
113|Sequence|561|570|SRPPSRYQSG
***** No hits found ******
114|Sequence|566|575|RYQSGPNSLP
***** No hits found ******
115|Sequence|571|580|PNSLPPRAAT
***** No hits found ******
116|Sequence|576|585|PRAATPTRPP
***** No hits found ******
117|Sequence|581|590|PTRPPSRPPS
>sp|IF2_AROAE|TRANSLATION initiation factor IF-2|Aromatoleum aromaticum (strain DSM 19018
Query: 1 PTRPPSRPP 9
P R PSRPP
Sbjct: 199 PVRAPSRPP 207
118|Sequence|586|595|SRPPSRPSRP
>sp|YAER_ECOLI|UNCHARACTERIZED protein YaeR|Escherichia coli (strain K12)
Query: 3 PPSRPSRP 10
PP RPSRP
Sbjct: 64 PPERPSRP 71
119|Sequence|591|600|RPSRPPSHPS
***** No hits found ******
120|Sequence|596|605|PSHPSAHGSP
>sp|NUOD_CAMJJ|NADH-QUINONE oxidoreductase subunit D|Campylobacter jejuni subsp. jejuni
Query: 1 PSHPSAHGS 9
P HPSAHG+
Sbjct: 29 PQHPSAHGN 37
>sp|NUOD_CAMJR|NADH-QUINONE oxidoreductase subunit D|Campylobacter jejuni (strain RM1221)
Query: 1 PSHPSAHGS 9
P HPSAHG+
Sbjct: 29 PQHPSAHGN 37
>sp|NUOD_CAMJE|NADH-QUINONE oxidoreductase subunit D|Campylobacter jejuni subsp. jejuni
Query: 1 PSHPSAHGS 9
P HPSAHG+
Sbjct: 29 PQHPSAHGN 37
>sp|NUOD_CAMJD|NADH-QUINONE oxidoreductase subunit D|Campylobacter jejuni subsp. doylei
Query: 1 PSHPSAHGS 9
P HPSAHG+
Sbjct: 29 PQHPSAHGN 37
>sp|NUOD_CAMJ8|NADH-QUINONE oxidoreductase subunit D|Campylobacter jejuni subsp. jejuni
Query: 1 PSHPSAHGS 9
P HPSAHG+
Sbjct: 29 PQHPSAHGN 37
>sp|NUOD_CAMC5|NADH-QUINONE oxidoreductase subunit D|Campylobacter curvus (strain 525.92)
Query: 1 PSHPSAHG 8
P HPSAHG
Sbjct: 30 PQHPSAHG 37
>sp|NUOCD_ALIB4|NADH-QUINONE oxidoreductase subunit C/D|Aliarcobacter butzleri (strain RM4018)
Query: 1 PSHPSAHGS 9
PSHP++HG+
Sbjct: 167 PSHPASHGT 175
>sp|NUOCD_BUCAT|NADH-QUINONE oxidoreductase subunit C/D|Buchnera aphidicola subsp. Acyrthosiphon
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_BUCBP|NADH-QUINONE oxidoreductase subunit C/D|Buchnera aphidicola subsp. Baizongia
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 219 PNHPSAHGA 227
>sp|NUOCD_BUCAI|NADH-QUINONE oxidoreductase subunit C/D|Buchnera aphidicola subsp. Acyrthosiphon
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_BUCA5|NADH-QUINONE oxidoreductase subunit C/D|Buchnera aphidicola subsp. Acyrthosiphon
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOD_SULDN|NADH-QUINONE oxidoreductase subunit D|Sulfurimonas denitrificans (strain ATCC
Query: 1 PSHPSAHG 8
P HPSAHG
Sbjct: 29 PQHPSAHG 36
>sp|NUOD_CAMHC|NADH-QUINONE oxidoreductase subunit D|Campylobacter hominis (strain ATCC
Query: 1 PSHPSAHG 8
P HPSAHG
Sbjct: 29 PQHPSAHG 36
>sp|NUOD_CAMC1|NADH-QUINONE oxidoreductase subunit D|Campylobacter concisus (strain 13826)
Query: 1 PSHPSAHG 8
P HPSAHG
Sbjct: 30 PQHPSAHG 37
>sp|NUOCD_BUCAP|NADH-QUINONE oxidoreductase subunit C/D|Buchnera aphidicola subsp. Schizaphis
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 219 PNHPSAHGA 227
>sp|NUOCD_CAMFF|NADH-QUINONE oxidoreductase subunit C/D|Campylobacter fetus subsp. fetus (strain
Query: 1 PSHPSAHGS 9
PSHP+ HG+
Sbjct: 184 PSHPATHGT 192
>sp|NUOD_AROAE|NADH-QUINONE oxidoreductase subunit D|Aromatoleum aromaticum (strain DSM 19018
Query: 1 PSHPSAHG 8
P HPSAHG
Sbjct: 13 PQHPSAHG 20
>sp|NUOCD_BUCCC|NADH-QUINONE oxidoreductase subunit C/D|Buchnera aphidicola subsp. Cinara cedri
Query: 1 PSHPSAHGS 9
P+HPS+HG+
Sbjct: 200 PNHPSSHGA 208
>sp|NUOD_NITSB|NADH-QUINONE oxidoreductase subunit D|Nitratiruptor sp. (strain SB155-2)
Query: 1 PSHPSAHG 8
P HPSAHG
Sbjct: 29 PQHPSAHG 36
>sp|NUOD_CUTAK|NADH-QUINONE oxidoreductase subunit D|Cutibacterium acnes (strain DSM 16379
Query: 1 PSHPSAHG 8
PSHPS HG
Sbjct: 35 PSHPSTHG 42
>sp|NUOCD_PSYWF|NADH-QUINONE oxidoreductase subunit C/D|Psychrobacter sp. (strain PRwf-1)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOCD_ACIBY|NADH-QUINONE oxidoreductase subunit C/D|Acinetobacter baumannii (strain AYE)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOCD_ACIBT|NADH-QUINONE oxidoreductase subunit C/D|Acinetobacter baumannii (strain ATCC
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOCD_ACIBS|NADH-QUINONE oxidoreductase subunit C/D|Acinetobacter baumannii (strain SDF)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOCD_ACIBC|NADH-QUINONE oxidoreductase subunit C/D|Acinetobacter baumannii (strain ACICU)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOCD_ACIB5|NADH-QUINONE oxidoreductase subunit C/D|Acinetobacter baumannii (strain AB0057)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOCD_ACIB3|NADH-QUINONE oxidoreductase subunit C/D|Acinetobacter baumannii (strain
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOD_HELHP|NADH-QUINONE oxidoreductase subunit D|Helicobacter hepaticus (strain ATCC
Query: 1 PSHPSAHG 8
P HPSAHG
Sbjct: 30 PQHPSAHG 37
>sp|NUOCD_SALPC|NADH-QUINONE oxidoreductase subunit C/D|Salmonella paratyphi C (strain RKS4594)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_PSYA2|NADH-QUINONE oxidoreductase subunit C/D|Psychrobacter arcticus (strain DSM 17307
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 214 PNHPSAHGA 222
>sp|NUOD_SULNB|NADH-QUINONE oxidoreductase subunit D|Sulfurovum sp. (strain NBC37-1)
Query: 1 PSHPSAHG 8
P HPSAHG
Sbjct: 29 PQHPSAHG 36
>sp|NUOCD_PSYCK|NADH-QUINONE oxidoreductase subunit C/D|Psychrobacter cryohalolentis (strain
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 214 PNHPSAHGA 222
>sp|NUOCD_SALNS|NADH-QUINONE oxidoreductase subunit C/D|Salmonella newport (strain SL254)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_SALCH|NADH-QUINONE oxidoreductase subunit C/D|Salmonella choleraesuis (strain SC-B67)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOCD_SALSV|NADH-QUINONE oxidoreductase subunit C/D|Salmonella schwarzengrund (strain
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_SALPK|NADH-QUINONE oxidoreductase subunit C/D|Salmonella paratyphi A (strain
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_SALPB|NADH-QUINONE oxidoreductase subunit C/D|Salmonella paratyphi B (strain ATCC
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_SALPA|NADH-QUINONE oxidoreductase subunit C/D|Salmonella paratyphi A (strain ATCC
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_SALAR|NADH-QUINONE oxidoreductase subunit C/D|Salmonella arizonae (strain ATCC BAA-731
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_SALA4|NADH-QUINONE oxidoreductase subunit C/D|Salmonella agona (strain SL483)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_SALTY|NADH-QUINONE oxidoreductase subunit C/D|Salmonella typhimurium (strain LT2 /
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOCD_SALTI|NADH-QUINONE oxidoreductase subunit C/D|Salmonella typhi
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOCD_SALHS|NADH-QUINONE oxidoreductase subunit C/D|Salmonella heidelberg (strain SL476)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOCD_SALG2|NADH-QUINONE oxidoreductase subunit C/D|Salmonella gallinarum (strain 287/91 /
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOCD_SALEP|NADH-QUINONE oxidoreductase subunit C/D|Salmonella enteritidis PT4 (strain
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOCD_SALDC|NADH-QUINONE oxidoreductase subunit C/D|Salmonella dublin (strain CT_02021853)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOCD_ACIAD|NADH-QUINONE oxidoreductase subunit C/D|Acinetobacter baylyi (strain ATCC 33305
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOD_METI4|NADH-QUINONE oxidoreductase subunit D|Methylacidiphilum infernorum (isolate
Query: 1 PSHPSAHG 8
PSHPS HG
Sbjct: 41 PSHPSTHG 48
>sp|NUOCD_SHISS|NADH-QUINONE oxidoreductase subunit C/D|Shigella sonnei (strain Ss046)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_SHIFL|NADH-QUINONE oxidoreductase subunit C/D|Shigella flexneri
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_SHIDS|NADH-QUINONE oxidoreductase subunit C/D|Shigella dysenteriae serotype 1 (strain
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_SHIBS|NADH-QUINONE oxidoreductase subunit C/D|Shigella boydii serotype 4 (strain
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_SHIB3|NADH-QUINONE oxidoreductase subunit C/D|Shigella boydii serotype 18 (strain
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ESCF3|NADH-QUINONE oxidoreductase subunit C/D|Escherichia fergusonii (strain ATCC
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ECOUT|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli (strain UTI89 /
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ECOSM|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli (strain SMS-3-5 /
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ECOSE|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli (strain SE11)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ECOLU|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli O17:K52:H18 (strain
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ECOLC|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli (strain ATCC 8739
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ECOL6|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli O6:H1 (strain CFT073
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ECOK1|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli O1:K1 / APEC
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ECOHS|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli O9:H4 (strain HS)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ECODH|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli (strain K12 /
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ECO8A|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli O8 (strain IAI1)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ECO81|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli O81 (strain ED1a)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ECO7I|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli O7:K1 (strain IAI39
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ECO55|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli (strain 55989 /
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ECO45|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli O45:K1 (strain S88
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ECO27|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli O127:H6 (strain
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ECO24|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli O139:H28 (strain
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_CROS8|NADH-QUINONE oxidoreductase subunit C/D|Cronobacter sakazakii (strain ATCC
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 225 PNHPSAHGA 233
>sp|NUOD_AZOSB|NADH-QUINONE oxidoreductase subunit D|Azoarcus sp. (strain BH72)
Query: 1 PSHPSAHG 8
P HPSAHG
Sbjct: 13 PQHPSAHG 20
>sp|NUOD_ACIF5|NADH-QUINONE oxidoreductase subunit D|Acidithiobacillus ferrooxidans (strain
Query: 1 PSHPSAHG 8
P HPSAHG
Sbjct: 13 PQHPSAHG 20
>sp|NUOCD_ECO5E|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli O157:H7 (strain EC4115
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_ECO57|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli O157:H7
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 222 PNHPSAHGA 230
>sp|NUOCD_SHIF8|NADH-QUINONE oxidoreductase subunit C/D|Shigella flexneri serotype 5b (strain
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOCD_ECOLI|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli (strain K12)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOCD_ECOL5|NADH-QUINONE oxidoreductase subunit C/D|Escherichia coli O6:K15:H31 (strain 536
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 218 PNHPSAHGA 226
>sp|NUOD_HYDCU|NADH-QUINONE oxidoreductase subunit D|Hydrogenovibrio crunogenus (strain DSM
Query: 1 PSHPSAHG 8
P HPSAHG
Sbjct: 13 PQHPSAHG 20
>sp|NUOCD_AERHH|NADH-QUINONE oxidoreductase subunit C/D|Aeromonas hydrophila subsp. hydrophila
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 223 PNHPSAHGA 231
>sp|NUOD_WOLSU|NADH-QUINONE oxidoreductase subunit D|Wolinella succinogenes (strain ATCC
Query: 1 PSHPSAHG 8
P HPSAHG
Sbjct: 29 PQHPSAHG 36
>sp|NUOCD_ECTM1|NADH-QUINONE oxidoreductase subunit C/D|Ectopseudomonas mendocina (strain ymp)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 216 PNHPSAHGA 224
>sp|NUOCD_SODGM|NADH-QUINONE oxidoreductase subunit C/D|Sodalis glossinidius (strain morsitans)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 221 PNHPSAHGA 229
>sp|NUOCD_KLEP7|NADH-QUINONE oxidoreductase subunit C/D|Klebsiella pneumoniae subsp. pneumoniae
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 224 PNHPSAHGA 232
>sp|NUOCD_AZOVD|NADH-QUINONE oxidoreductase subunit C/D|Azotobacter vinelandii (strain DJ /
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 216 PNHPSAHGA 224
>sp|NUOCD_PSEPK|NADH-QUINONE oxidoreductase subunit C/D|Pseudomonas putida (strain ATCC 47054
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 216 PNHPSAHGA 224
>sp|NUOCD_ERWT9|NADH-QUINONE oxidoreductase subunit C/D|Erwinia tasmaniensis (strain DSM 17950
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 221 PNHPSAHGA 229
>sp|NUOD1_OPITP|NADH-QUINONE oxidoreductase subunit D 1|Opitutus terrae (strain DSM 11246
Query: 1 PSHPSAHG 8
PSHPS HG
Sbjct: 48 PSHPSTHG 55
>sp|NUOCD_PSEP1|NADH-QUINONE oxidoreductase subunit C/D|Pseudomonas putida (strain ATCC 700007
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 216 PNHPSAHGA 224
>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 25 PQHPAAHG 32
>sp|NUOD_RHOP2|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain HaA2)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 20 PQHPAAHG 27
>sp|NUOD_AGRFC|NADH-QUINONE oxidoreductase subunit D|Agrobacterium fabrum (strain C58 /
Query: 1 PSHPSAHG 8
P HPSAHG
Sbjct: 15 PEHPSAHG 22
>sp|NUOCD_PSEPG|NADH-QUINONE oxidoreductase subunit C/D|Pseudomonas putida (strain GB-1)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 216 PNHPSAHGA 224
>sp|NUOCD_KLEV3|NADH-QUINONE oxidoreductase subunit C/D|Klebsiella variicola (strain 342)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 224 PNHPSAHGA 232
>sp|NUOCD_PSEF5|NADH-QUINONE oxidoreductase subunit C/D|Pseudomonas fluorescens (strain ATCC
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 216 PNHPSAHGA 224
>sp|NUOD_VESOH|NADH-QUINONE oxidoreductase subunit D|Vesicomyosocius okutanii subsp.
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_HELMI|NADH-QUINONE oxidoreductase subunit D|Heliobacterium modesticaldum (strain
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 12 PQHPSTHG 19
>sp|NUOD_GEOTN|NADH-QUINONE oxidoreductase subunit D|Geobacillus thermodenitrificans (strain
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 13 PQHPSTHG 20
>sp|NUOD_DEHMC|NADH-QUINONE oxidoreductase subunit D|Dehalococcoides mccartyi (strain CBDB1)
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 14 PQHPSTHG 21
>sp|NUOD_DEHMB|NADH-QUINONE oxidoreductase subunit D|Dehalococcoides mccartyi (strain ATCC
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 14 PQHPSTHG 21
>sp|NUOD_DEHM1|NADH-QUINONE oxidoreductase subunit D|Dehalococcoides mccartyi (strain ATCC
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 14 PQHPSTHG 21
>sp|NUOD_BACMK|NADH-QUINONE oxidoreductase subunit D|Bacillus mycoides (strain KBAB4)
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 13 PQHPSTHG 20
>sp|NUOD_BACHK|NADH-QUINONE oxidoreductase subunit D|Bacillus thuringiensis subsp. konkukian
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 13 PQHPSTHG 20
>sp|NUOD_BACCZ|NADH-QUINONE oxidoreductase subunit D|Bacillus cereus (strain ZK /
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 13 PQHPSTHG 20
>sp|NUOD_BACCR|NADH-QUINONE oxidoreductase subunit D|Bacillus cereus (strain ATCC 14579
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 13 PQHPSTHG 20
>sp|NUOD_BACCN|NADH-QUINONE oxidoreductase subunit D|Bacillus cytotoxicus (strain DSM 22905
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 13 PQHPSTHG 20
>sp|NUOD_BACC1|NADH-QUINONE oxidoreductase subunit D|Bacillus cereus (strain ATCC 10987
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 13 PQHPSTHG 20
>sp|NUOD_BACAN|NADH-QUINONE oxidoreductase subunit D|Bacillus anthracis
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 13 PQHPSTHG 20
>sp|NUOD_BACAH|NADH-QUINONE oxidoreductase subunit D|Bacillus thuringiensis (strain Al Hakam)
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 13 PQHPSTHG 20
>sp|NUOD2_SOLUE|NADH-QUINONE oxidoreductase subunit D 2|Solibacter usitatus (strain Ellin6076)
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 18 PQHPSTHG 25
>sp|NUOD2_SALAI|NADH-QUINONE oxidoreductase subunit D 2|Salinispora arenicola (strain CNS-205)
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 31 PQHPSTHG 38
>sp|NUOD2_HERA2|NADH-QUINONE oxidoreductase subunit D 2|Herpetosiphon aurantiacus (strain ATCC
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 13 PQHPSTHG 20
>sp|NUOD1_CYTH3|NADH-QUINONE oxidoreductase subunit D 1|Cytophaga hutchinsonii (strain ATCC
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 25 PQHPSTHG 32
>sp|NUOCD_PSEPF|NADH-QUINONE oxidoreductase subunit C/D|Pseudomonas fluorescens (strain Pf0-1)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 217 PNHPSAHGA 225
>sp|NUOD_AKKM8|NADH-QUINONE oxidoreductase subunit D|Akkermansia muciniphila (strain ATCC
Query: 1 PSHPSAHG 8
PSHP+ HG
Sbjct: 37 PSHPATHG 44
>sp|NUOD1_ANADF|NADH-QUINONE oxidoreductase subunit D 1|Anaeromyxobacter sp. (strain Fw109-5)
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 22 PQHPSTHG 29
>sp|NUOCD_PSEPW|NADH-QUINONE oxidoreductase subunit C/D|Pseudomonas putida (strain W619)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 216 PNHPSAHGA 224
>sp|NUOD_POLAQ|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter asymbioticus (strain
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOCD_SERP5|NADH-QUINONE oxidoreductase subunit C/D|Serratia proteamaculans (strain 568)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 220 PNHPSAHGA 228
>sp|NUOCD_BAUCH|NADH-QUINONE oxidoreductase subunit C/D|Baumannia cicadellinicola subsp.
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 217 PNHPSAHGA 225
>sp|NUOD_NEIMB|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup B
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 14 PQHPAAHG 21
>sp|NUOD_LEPBL|NADH-QUINONE oxidoreductase subunit D|Leptospira borgpetersenii serovar
Query: 1 PSHPSAHG 8
PSHP+ HG
Sbjct: 28 PSHPATHG 35
>sp|NUOD_LEPBJ|NADH-QUINONE oxidoreductase subunit D|Leptospira borgpetersenii serovar
Query: 1 PSHPSAHG 8
PSHP+ HG
Sbjct: 27 PSHPATHG 34
>sp|NUOD2_SALTO|NADH-QUINONE oxidoreductase subunit D 2|Salinispora tropica (strain ATCC
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 34 PQHPSTHG 41
>sp|NUOCD_AERS4|NADH-QUINONE oxidoreductase subunit C/D|Aeromonas salmonicida (strain A449)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 223 PNHPSAHGA 231
>sp|NUOD_NEIM0|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 14 PQHPAAHG 21
>sp|NUOCD_PSEP7|NADH-QUINONE oxidoreductase subunit C/D|Pseudomonas paraeruginosa (strain DSM
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 216 PNHPSAHGA 224
>sp|NUOD_CERS5|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 24 PQHPAAHG 31
>sp|NUOD_MAGMM|NADH-QUINONE oxidoreductase subunit D|Magnetococcus marinus (strain ATCC
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 20 PQHPAAHG 27
>sp|NUOCD_PSEE4|NADH-QUINONE oxidoreductase subunit C/D|Pseudomonas entomophila (strain L48)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 216 PNHPSAHGA 224
>sp|NUOD_NEIMF|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup C /
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 14 PQHPAAHG 21
>sp|NUOD_NEIMA|NADH-QUINONE oxidoreductase subunit D|Neisseria meningitidis serogroup A /
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 14 PQHPAAHG 21
>sp|NUOCD_PSEAE|NADH-QUINONE oxidoreductase subunit C/D|Pseudomonas aeruginosa (strain ATCC
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 216 PNHPSAHGA 224
>sp|NUOCD_PSEAB|NADH-QUINONE oxidoreductase subunit C/D|Pseudomonas aeruginosa (strain
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 216 PNHPSAHGA 224
>sp|NUOD_NEIG2|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain NCCP11945)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 14 PQHPAAHG 21
>sp|NUOD_NEIG1|NADH-QUINONE oxidoreductase subunit D|Neisseria gonorrhoeae (strain ATCC
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 14 PQHPAAHG 21
>sp|NUOCD_PSESM|NADH-QUINONE oxidoreductase subunit C/D|Pseudomonas syringae pv. tomato (strain
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 216 PNHPSAHGA 224
>sp|NUOCD_PSEFS|NADH-QUINONE oxidoreductase subunit C/D|Pseudomonas fluorescens (strain SBW25)
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 217 PNHPSAHGA 225
>sp|NUOD1_KORVE|NADH-QUINONE oxidoreductase subunit D 1|Koribacter versatilis (strain
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 29 PQHPSTHG 36
>sp|NUOD_RUTMC|NADH-QUINONE oxidoreductase subunit D|Ruthia magnifica subsp. Calyptogena
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_MARMM|NADH-QUINONE oxidoreductase subunit D|Maricaulis maris (strain MCS10)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 21 PQHPAAHG 28
>sp|NUOD_LEPIN|NADH-QUINONE oxidoreductase subunit D|Leptospira interrogans serogroup
Query: 1 PSHPSAHG 8
PSHP+ HG
Sbjct: 28 PSHPATHG 35
>sp|NUOD_LEPIC|NADH-QUINONE oxidoreductase subunit D|Leptospira interrogans serogroup
Query: 1 PSHPSAHG 8
PSHP+ HG
Sbjct: 28 PSHPATHG 35
>sp|NUOD_COXBU|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 493
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_COXBR|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain RSA 331
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_CERS4|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 26 PQHPAAHG 33
>sp|NUOD_CERS1|NADH-QUINONE oxidoreductase subunit D|Cereibacter sphaeroides (strain ATCC
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 24 PQHPAAHG 31
>sp|NUOCD_PSEU2|NADH-QUINONE oxidoreductase subunit C/D|Pseudomonas syringae pv. syringae
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 216 PNHPSAHGA 224
>sp|NUOD_PELPD|NADH-QUINONE oxidoreductase subunit D|Pelobacter propionicus (strain DSM 2379
Query: 1 PSHPSAHGS 9
PSHP+ HG+
Sbjct: 26 PSHPATHGT 34
>sp|NUOD_DESRM|NADH-QUINONE oxidoreductase subunit D|Desulforamulus reducens (strain ATCC
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 14 PQHPSTHG 21
>sp|NUOD2_ANADE|NADH-QUINONE oxidoreductase subunit D 2|Anaeromyxobacter dehalogenans (strain
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 22 PQHPSTHG 29
>sp|NUOCD_SHEON|NADH-QUINONE oxidoreductase subunit C/D|Shewanella oneidensis (strain ATCC
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 223 PNHPSAHGA 231
>sp|NUOD1_ANASK|NADH-QUINONE oxidoreductase subunit D 1|Anaeromyxobacter sp. (strain K)
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 22 PQHPSTHG 29
>sp|NUOD_GEOKA|NADH-QUINONE oxidoreductase subunit D|Geobacillus kaustophilus (strain HTA426)
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 14 PQHPSTHG 21
>sp|NUOD_CLOB8|NADH-QUINONE oxidoreductase subunit D|Clostridium beijerinckii (strain ATCC
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 18 PQHPSTHG 25
>sp|NUOCD_PSE14|NADH-QUINONE oxidoreductase subunit C/D|Pseudomonas savastanoi pv. phaseolicola
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 216 PNHPSAHGA 224
>sp|NUOD_PARXL|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia xenovorans (strain
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_BURVG|NADH-QUINONE oxidoreductase subunit D|Burkholderia vietnamiensis (strain G4 /
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_RALPJ|NADH-QUINONE oxidoreductase subunit D|Ralstonia pickettii (strain 12J)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_PARPJ|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phytofirmans (strain
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_COXBN|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain Dugway
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_COXB2|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuG_Q212)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_COXB1|NADH-QUINONE oxidoreductase subunit D|Coxiella burnetii (strain CbuK_Q154)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_POLNS|NADH-QUINONE oxidoreductase subunit D|Polynucleobacter necessarius subsp.
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_PELUB|NADH-QUINONE oxidoreductase subunit D|Pelagibacter ubique (strain HTCC1062)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 14 PQHPAAHG 21
>sp|NUOD_CHLPB|NADH-QUINONE oxidoreductase subunit D|Chlorobium phaeobacteroides (strain BS1)
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 39 PQHPSTHG 46
>sp|NUOD_CHLP8|NADH-QUINONE oxidoreductase subunit D|Chlorobaculum parvum (strain DSM 263
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 39 PQHPSTHG 46
>sp|NUOD_CHLCH|NADH-QUINONE oxidoreductase subunit D|Chlorobium chlorochromatii (strain CaD3)
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 39 PQHPSTHG 46
>sp|NUOD1_SOLUE|NADH-QUINONE oxidoreductase subunit D 1|Solibacter usitatus (strain Ellin6076)
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 32 PQHPSTHG 39
>sp|NUOD_LEPCP|NADH-QUINONE oxidoreductase subunit D|Leptothrix cholodnii (strain ATCC 51168
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_PARP8|NADH-QUINONE oxidoreductase subunit D|Paraburkholderia phymatum (strain DSM
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_CHLTE|NADH-QUINONE oxidoreductase subunit D|Chlorobaculum tepidum (strain ATCC 49652
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 39 PQHPSTHG 46
>sp|NUOD_XYLFT|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain Temecula1 /
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 31 PQHPAAHG 38
>sp|NUOD_XYLFM|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M12)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 31 PQHPAAHG 38
>sp|NUOD_XYLFA|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain 9a5c)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 31 PQHPAAHG 38
>sp|NUOD_XYLF2|NADH-QUINONE oxidoreductase subunit D|Xylella fastidiosa (strain M23)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 31 PQHPAAHG 38
>sp|NUOD_RHOPS|NADH-QUINONE oxidoreductase subunit D|Rhodopseudomonas palustris (strain
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 35 PQHPAAHG 42
>sp|NUOD_RHILO|NADH-QUINONE oxidoreductase subunit D|Mesorhizobium japonicum (strain LMG
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 15 PQHPAAHG 22
>sp|NUOD_PARDP|NADH-QUINONE oxidoreductase subunit D|Paracoccus denitrificans (strain Pd
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 33 PQHPAAHG 40
>sp|NUOD_NITOC|NADH-QUINONE oxidoreductase subunit D|Nitrosococcus oceani (strain ATCC 19707
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_METPP|NADH-QUINONE oxidoreductase subunit D|Methylibium petroleiphilum (strain ATCC
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_JANSC|NADH-QUINONE oxidoreductase subunit D|Jannaschia sp. (strain CCS1)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 34 PQHPAAHG 41
>sp|NUOD_DINSH|NADH-QUINONE oxidoreductase subunit D|Dinoroseobacter shibae (strain DSM 16493
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 26 PQHPAAHG 33
>sp|NUOD_BRUA4|NADH-QUINONE oxidoreductase subunit D|Brucella anthropi (strain ATCC 49188
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 15 PQHPAAHG 22
>sp|NUOD2_NITHX|NADH-QUINONE oxidoreductase subunit D 2|Nitrobacter hamburgensis (strain DSM
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 21 PQHPAAHG 28
>sp|NUOCD_SHEWM|NADH-QUINONE oxidoreductase subunit C/D|Shewanella woodyi (strain ATCC 51908
Query: 1 PSHPSAHG 8
P+HPS HG
Sbjct: 222 PNHPSVHG 229
>sp|NUOCD_CHRI1|NADH-QUINONE oxidoreductase subunit C/D|Chromohalobacter israelensis (strain
Query: 1 PSHPSAHGS 9
P+HPSAHG+
Sbjct: 215 PNHPSAHGA 223
>sp|NQO4_PARDE|NADH-QUINONE oxidoreductase subunit 4|Paracoccus denitrificans
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 33 PQHPAAHG 40
>sp|NUOD_EHRCR|NADH-QUINONE oxidoreductase subunit D|Ehrlichia chaffeensis (strain ATCC
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 16 PQHPAAHG 23
>sp|NUOD_PELPB|NADH-QUINONE oxidoreductase subunit D|Pelodictyon phaeoclathratiforme (strain
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 39 PQHPSTHG 46
>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 33 PQHPAAHG 40
>sp|NUOD_JANMA|NADH-QUINONE oxidoreductase subunit D|Janthinobacterium sp. (strain Marseille)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_EHRCJ|NADH-QUINONE oxidoreductase subunit D|Ehrlichia canis (strain Jake)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 16 PQHPAAHG 23
>sp|NUOD_BURA4|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain MC40-6)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_CHLPD|NADH-QUINONE oxidoreductase subunit D|Chlorobium phaeobacteroides (strain DSM
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 39 PQHPSTHG 46
>sp|NUOD_BURPS|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_BURP6|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 668)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_BURP1|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1710b)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_BURP0|NADH-QUINONE oxidoreductase subunit D|Burkholderia pseudomallei (strain 1106a)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_BURMS|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain SAVP1)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_BURMA|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain ATCC 23344)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_BURM9|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10229)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_BURM7|NADH-QUINONE oxidoreductase subunit D|Burkholderia mallei (strain NCTC 10247)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_ACISJ|NADH-QUINONE oxidoreductase subunit D|Acidovorax sp. (strain JS42)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_LEGPC|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Corby)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_LEGPA|NADH-QUINONE oxidoreductase subunit D|Legionella pneumophila (strain Paris)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD2_SYMTH|NADH-QUINONE oxidoreductase subunit D 2|Symbiobacterium thermophilum (strain
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 15 PQHPSTHG 22
>sp|NUOD1_STRCO|NADH-QUINONE oxidoreductase subunit D 1|Streptomyces coelicolor (strain ATCC
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 26 PQHPSTHG 33
>sp|NUOD_LEPBP|NADH-QUINONE oxidoreductase subunit D|Leptospira biflexa serovar Patoc (strain
Query: 1 PSHPSAHG 8
PSHP+ HG
Sbjct: 29 PSHPATHG 36
>sp|NUOD_LEPBA|NADH-QUINONE oxidoreductase subunit D|Leptospira biflexa serovar Patoc (strain
Query: 1 PSHPSAHG 8
PSHP+ HG
Sbjct: 29 PSHPATHG 36
>sp|NUOD_CHESB|NADH-QUINONE oxidoreductase subunit D|Chelativorans sp. (strain BNC1)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 15 PQHPAAHG 22
>sp|NUOD_BURO0|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain MC0-3)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_BURM1|NADH-QUINONE oxidoreductase subunit D|Burkholderia multivorans (strain ATCC
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_BURCM|NADH-QUINONE oxidoreductase subunit D|Burkholderia ambifaria (strain ATCC
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_BRUME|NADH-QUINONE oxidoreductase subunit D|Brucella melitensis biotype 1 (strain
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 15 PQHPAAHG 22
>sp|NUOD_METFK|NADH-QUINONE oxidoreductase subunit D|Methylobacillus flagellatus (strain ATCC
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_HYPNA|NADH-QUINONE oxidoreductase subunit D|Hyphomonas neptunium (strain ATCC 15444)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 12 PQHPAAHG 19
>sp|NUOD_BURO1|NADH-QUINONE oxidoreductase subunit D|Burkholderia orbicola (strain AU 1054)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_BURL3|NADH-QUINONE oxidoreductase subunit D|Burkholderia lata (strain ATCC 17760
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_BURCJ|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain ATCC
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_BURCH|NADH-QUINONE oxidoreductase subunit D|Burkholderia cenocepacia (strain HI2424)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD1_SORC5|NADH-QUINONE oxidoreductase subunit D 1|Sorangium cellulosum (strain So ce56)
Query: 1 PSHPSAHGS 9
PSHP+ HG+
Sbjct: 26 PSHPAMHGT 34
>sp|NUOD_HELPY|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain ATCC 700392
Query: 1 PSHPSAHG 8
P HPS+HG
Sbjct: 30 PQHPSSHG 37
>sp|NUOD_HELPH|NADH-QUINONE oxidoreductase subunit D|Helicobacter pylori (strain HPAG1)
Query: 1 PSHPSAHG 8
P HPS+HG
Sbjct: 30 PQHPSSHG 37
>sp|NUOD_NITWN|NADH-QUINONE oxidoreductase subunit D|Nitrobacter winogradskyi (strain ATCC
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 21 PQHPAAHG 28
>sp|NUOD_BURTA|NADH-QUINONE oxidoreductase subunit D|Burkholderia thailandensis (strain ATCC
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_BRUSU|NADH-QUINONE oxidoreductase subunit D|Brucella suis biovar 1 (strain
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 15 PQHPAAHG 22
>sp|NUOD_BRUSI|NADH-QUINONE oxidoreductase subunit D|Brucella suis (strain ATCC 23445
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 15 PQHPAAHG 22
>sp|NUOD_BRUO2|NADH-QUINONE oxidoreductase subunit D|Brucella ovis (strain ATCC 25840
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 15 PQHPAAHG 22
>sp|NUOD_BRUC2|NADH-QUINONE oxidoreductase subunit D|Brucella canis (strain ATCC 23365
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 15 PQHPAAHG 22
>sp|NUOD_BRUAB|NADH-QUINONE oxidoreductase subunit D|Brucella abortus biovar 1 (strain
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 15 PQHPAAHG 22
>sp|NUOD_BRUA2|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain 2308)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 15 PQHPAAHG 22
>sp|NUOD_BRUA1|NADH-QUINONE oxidoreductase subunit D|Brucella abortus (strain S19)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 15 PQHPAAHG 22
>sp|NUOCD_PROMH|NADH-QUINONE oxidoreductase subunit C/D|Proteus mirabilis (strain HI4320)
Query: 1 PSHPSAHGS 9
P+HPS+HG+
Sbjct: 221 PNHPSSHGA 229
>sp|NUOCD_PECAS|NADH-QUINONE oxidoreductase subunit C/D|Pectobacterium atrosepticum (strain SCRI
Query: 1 PSHPSAHGS 9
P+HPS+HG+
Sbjct: 221 PNHPSSHGA 229
>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 27 PQHPAAHG 34
>sp|NUOD_POLSJ|NADH-QUINONE oxidoreductase subunit D|Polaromonas sp. (strain JS666 /
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_POLNA|NADH-QUINONE oxidoreductase subunit D|Polaromonas naphthalenivorans (strain
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_HERAR|NADH-QUINONE oxidoreductase subunit D|Herminiimonas arsenicoxydans
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_CUPMC|NADH-QUINONE oxidoreductase subunit D|Cupriavidus metallidurans (strain ATCC
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD_ALBFT|NADH-QUINONE oxidoreductase subunit D|Albidiferax ferrireducens (strain ATCC
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 15 PQHPAAHG 22
>sp|NUOD_CHLL2|NADH-QUINONE oxidoreductase subunit D|Chlorobium limicola (strain DSM 245
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 34 PQHPSTHG 41
>sp|NUOD2_RHIEC|NADH-QUINONE oxidoreductase subunit D 2|Rhizobium etli (strain ATCC 51251
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 26 PQHPSTHG 33
>sp|NUOD_BRASO|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium sp. (strain ORS 278)
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 17 PQHPAAHG 24
>sp|NUOD_BRADU|NADH-QUINONE oxidoreductase subunit D|Bradyrhizobium diazoefficiens (strain
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 17 PQHPAAHG 24
>sp|NUOD_CARHZ|NADH-QUINONE oxidoreductase subunit D|Carboxydothermus hydrogenoformans
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 13 PQHPSTHG 20
>sp|NUOD2_RHIE6|NADH-QUINONE oxidoreductase subunit D 2|Rhizobium etli (strain CIAT 652)
Query: 1 PSHPSAHG 8
P HPS HG
Sbjct: 26 PQHPSTHG 33
>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 15 PQHPAAHG 22
>sp|NUOD_CHRVO|NADH-QUINONE oxidoreductase subunit D|Chromobacterium violaceum (strain ATCC
Query: 1 PSHPSAHG 8
P HP+AHG
Sbjct: 13 PQHPAAHG 20
121|Sequence|601|610|AHGSPAPVST
***** No hits found ******
122|Sequence|606|615|APVSTMPKRM
***** No hits found ******
123|Sequence|611|620|MPKRMSSEGP
***** No hits found ******
124|Sequence|616|625|SSEGPPRMSP
***** No hits found ******
125|Sequence|621|630|PRMSPKAQRH
***** No hits found ******
126|Sequence|626|635|KAQRHPRNHR
***** No hits found ******
127|Sequence|631|640|PRNHRVSAGR
***** No hits found ******
128|Sequence|636|645|VSAGRGSISS
***** No hits found ******
129|Sequence|641|650|GSISSGLEFV
***** No hits found ******
130|Sequence|646|655|GLEFVSHNPP
***** No hits found ******
131|Sequence|651|660|SHNPPSEAAT
>sp|RECA_TOLAT|PROTEIN RecA|Tolumonas auensis (strain DSM 9187
Query: 1 SHNPPSEAA 9
SHNPP+E A
Sbjct: 328 SHNPPTEIA 336
132|Sequence|656|665|SEAATPPVAR
***** No hits found ******
133|Sequence|661|670|PPVARTSPSG
***** No hits found ******
134|Sequence|666|675|TSPSGGTWSS
***** No hits found ******
135|Sequence|671|680|GTWSSVVSGV
>sp|TREP_THEBR|ALPHA,ALPHA-TREHALOSE phosphorylase|Thermoanaerobacter brockii (Thermoanaerobium brockii)
Query: 1 GTWSSVVSG 9
GTWS+VV+G
Sbjct: 695 GTWSAVVNG 703
136|Sequence|676|685|VVSGVPRLSP
***** No hits found ******
137|Sequence|681|690|PRLSPKTHRP
***** No hits found ******
138|Sequence|686|695|KTHRPRSPRQ
***** No hits found ******
139|Sequence|691|700|RSPRQNSIGN
***** No hits found ******
140|Sequence|696|705|NSIGNTPSGP
>sp|DAPE_WOLPP|SUCCINYL-DIAMINOPIMELATE desuccinylase|Wolbachia pipientis subsp. Culex pipiens
Query: 1 NSIGNTPSGP 10
N IGNTP GP
Sbjct: 386 NVIGNTPDGP 395
141|Sequence|701|710|TPSGPVLASP
***** No hits found ******
142|Sequence|706|715|VLASPQAGII
***** No hits found ******
143|Sequence|711|720|QAGIIPTEAV
***** No hits found ******
144|Sequence|716|725|PTEAVAMPIP
***** No hits found ******
145|Sequence|721|730|AMPIPAASPT
***** No hits found ******
146|Sequence|726|735|AASPTPASPA
***** No hits found ******
147|Sequence|731|740|PASPASNRAV
***** No hits found ******
148|Sequence|736|745|SNRAVTPSSE
***** No hits found ******
149|Sequence|741|750|TPSSEAKDSR
***** No hits found ******
150|Sequence|746|755|AKDSRLQDQR
***** No hits found ******
151|Sequence|751|760|LQDQRQNSPA
***** No hits found ******
152|Sequence|756|765|QNSPAGNKEN
***** No hits found ******
153|Sequence|761|770|GNKENIKPNE
***** No hits found ******
154|Sequence|766|775|IKPNETSPSF
***** No hits found ******
155|Sequence|771|780|TSPSFSKAEN
***** No hits found ******
156|Sequence|776|785|SKAENKGISP
***** No hits found ******
157|Sequence|781|790|KGISPVVSEH
>sp|PRMC_BACCR|RELEASE factor glutamine methyltransferase|Bacillus cereus (strain ATCC
Query: 1 KGISPVVSEH 10
+G+SPVV EH
Sbjct: 198 RGLSPVVKEH 207
>sp|PRMC_BACAN|RELEASE factor glutamine methyltransferase|Bacillus anthracis
Query: 1 KGISPVVSEH 10
+G+SPVV EH
Sbjct: 198 RGLSPVVKEH 207
158|Sequence|786|795|VVSEHRKQID
***** No hits found ******
159|Sequence|791|800|RKQIDDLKKF
>sp|SYD_SHESW|ASPARTATE--TRNA ligase|Shewanella sp. (strain W3-18-1)
Query: 1 RKQIDDLKKF 10
RKQIDD KF
Sbjct: 333 RKQIDDYTKF 342
>sp|SYD_SHEPC|ASPARTATE--TRNA ligase|Shewanella putrefaciens (strain CN-32 /
Query: 1 RKQIDDLKKF 10
RKQIDD KF
Sbjct: 333 RKQIDDYTKF 342
>sp|SYD_SHESR|ASPARTATE--TRNA ligase|Shewanella sp. (strain MR-7)
Query: 1 RKQIDDLKKF 10
RKQIDD KF
Sbjct: 333 RKQIDDYTKF 342
>sp|SYD_SHESA|ASPARTATE--TRNA ligase|Shewanella sp. (strain ANA-3)
Query: 1 RKQIDDLKKF 10
RKQIDD KF
Sbjct: 333 RKQIDDYTKF 342
>sp|SYD_SHEDO|ASPARTATE--TRNA ligase|Shewanella denitrificans (strain OS217 /
Query: 1 RKQIDDLKKF 10
RKQIDD KF
Sbjct: 333 RKQIDDYTKF 342
>sp|SYD_SHEB9|ASPARTATE--TRNA ligase|Shewanella baltica (strain OS195)
Query: 1 RKQIDDLKKF 10
RKQIDD KF
Sbjct: 333 RKQIDDYTKF 342
>sp|SYD_SHEB8|ASPARTATE--TRNA ligase|Shewanella baltica (strain OS185)
Query: 1 RKQIDDLKKF 10
RKQIDD KF
Sbjct: 333 RKQIDDYTKF 342
>sp|SYD_SHEB2|ASPARTATE--TRNA ligase|Shewanella baltica (strain OS223)
Query: 1 RKQIDDLKKF 10
RKQIDD KF
Sbjct: 333 RKQIDDYTKF 342
>sp|SYD_SHEB5|ASPARTATE--TRNA ligase|Shewanella baltica (strain OS155 /
Query: 1 RKQIDDLKKF 10
RKQIDD KF
Sbjct: 333 RKQIDDYTKF 342
>sp|SYD_SHESM|ASPARTATE--TRNA ligase|Shewanella sp. (strain MR-4)
Query: 1 RKQIDDLKKF 10
RKQIDD KF
Sbjct: 333 RKQIDDYTKF 342
>sp|SYD_SHEON|ASPARTATE--TRNA ligase|Shewanella oneidensis (strain ATCC 700550
Query: 1 RKQIDDLKKF 10
RKQIDD KF
Sbjct: 333 RKQIDDYTKF 342
>sp|ARLY_CALBD|ARGININOSUCCINATE lyase|Caldicellulosiruptor bescii (strain ATCC BAA-1888
Query: 1 RKQIDDLKKF 10
RKQID+LK+F
Sbjct: 448 RKQIDNLKEF 457
>sp|SYD_SHEFN|ASPARTATE--TRNA ligase|Shewanella frigidimarina (strain NCIMB 400)
Query: 1 RKQIDDLKKF 10
RKQIDD KF
Sbjct: 333 RKQIDDYTKF 342
>sp|SYDND_PSEF5|ASPARTATE--TRNA(ASP/ASN) ligase|Pseudomonas fluorescens (strain ATCC BAA-477
Query: 1 RKQIDDLKKF 10
RKQIDD KF
Sbjct: 334 RKQIDDYTKF 343
>sp|SYDND_MARMS|ASPARTATE--TRNA(ASP/ASN) ligase|Marinomonas sp. (strain MWYL1)
Query: 1 RKQIDDLKKF 10
RKQIDD KF
Sbjct: 333 RKQIDDYTKF 342
160|Sequence|796|805|DLKKFKNDFR
***** No hits found ******
161|Sequence|801|810|KNDFRLQPSS
***** No hits found ******
162|Sequence|806|815|LQPSSTSESM
***** No hits found ******
163|Sequence|811|820|TSESMDQLLN
***** No hits found ******
164|Sequence|816|825|DQLLNKNREG
***** No hits found ******
165|Sequence|821|830|KNREGEKSRD
***** No hits found ******
166|Sequence|826|835|EKSRDLIKDK
***** No hits found ******
167|Sequence|831|840|LIKDKIEPSA
***** No hits found ******
168|Sequence|836|845|IEPSAKDSFI
***** No hits found ******
169|Sequence|841|850|KDSFIENSSS
***** No hits found ******
170|Sequence|846|855|ENSSSNCTSG
***** No hits found ******
171|Sequence|851|860|NCTSGSSKPN
***** No hits found ******
172|Sequence|856|865|SSKPNSPSIS
***** No hits found ******
173|Sequence|861|870|SPSISPSILS
***** No hits found ******
174|Sequence|866|875|PSILSNTEHK
***** No hits found ******
175|Sequence|871|880|NTEHKRGPEV
***** No hits found ******
176|Sequence|876|885|RGPEVTSQGV
***** No hits found ******
177|Sequence|881|890|TSQGVQTSSP
***** No hits found ******
178|Sequence|886|895|QTSSPACKQE
***** No hits found ******
179|Sequence|891|900|ACKQEKDDKE
***** No hits found ******
180|Sequence|896|905|KDDKEEKKDA
***** No hits found ******
181|Sequence|901|910|EKKDAAEQVR
***** No hits found ******
182|Sequence|906|915|AEQVRKSTLN
***** No hits found ******
183|Sequence|911|920|KSTLNPNAKE
***** No hits found ******
184|Sequence|916|925|PNAKEFNPRS
***** No hits found ******
185|Sequence|921|930|FNPRSFSQPK
***** No hits found ******
186|Sequence|926|935|FSQPKPSTTP
***** No hits found ******
187|Sequence|931|940|PSTTPTSPRP
***** No hits found ******
188|Sequence|936|945|TSPRPQAQPS
***** No hits found ******
189|Sequence|941|950|QAQPSPSMVG
***** No hits found ******
190|Sequence|946|955|PSMVGHQQPT
***** No hits found ******
191|Sequence|951|960|HQQPTPVYTQ
***** No hits found ******
192|Sequence|956|965|PVYTQPVCFA
>sp|TRMD_UREU1|TRNA (guanine-N(1)-)-methyltransferase|Ureaplasma urealyticum serovar 10
Query: 1 PVYTQPVCF 9
PVYT+PV F
Sbjct: 175 PVYTRPVVF 183
193|Sequence|961|970|PVCFAPNMMY
***** No hits found ******
194|Sequence|966|975|PNMMYPVPVS
***** No hits found ******
195|Sequence|971|980|PVPVSPGVQP
>sp|ALGE6_AZOVI|MANNURONAN C5-epimerase AlgE6|Azotobacter vinelandii
Query: 1 PVPVSPGVQ 9
PVPV PGV+
Sbjct: 691 PVPVDPGVE 699
196|Sequence|976|985|PGVQPLYPIP
***** No hits found ******
197|Sequence|981|990|LYPIPMTPMP
***** No hits found ******
198|Sequence|986|995|MTPMPVNQAK
***** No hits found ******
199|Sequence|991|1000|VNQAKTYRAV
***** No hits found ******
200|Sequence|996|1005|TYRAVPNMPQ
***** No hits found ******
201|Sequence|1001|1010|PNMPQQRQDQ
>sp|GLPK_XANC8|GLYCEROL kinase|Xanthomonas campestris pv. campestris (strain
Query: 1 PNMPQQRQDQ 10
PNMP++R++Q
Sbjct: 472 PNMPEERREQ 481
>sp|GLPK_XANCP|GLYCEROL kinase|Xanthomonas campestris pv. campestris (strain
Query: 1 PNMPQQRQDQ 10
PNMP++R++Q
Sbjct: 472 PNMPEERREQ 481
>sp|GLPK_XANCB|GLYCEROL kinase|Xanthomonas campestris pv. campestris (strain
Query: 1 PNMPQQRQDQ 10
PNMP++R++Q
Sbjct: 472 PNMPEERREQ 481
202|Sequence|1006|1015|QRQDQHHQSA
***** No hits found ******
203|Sequence|1011|1020|HHQSAMMHPA
***** No hits found ******
204|Sequence|1016|1025|MMHPASAAGP
***** No hits found ******
205|Sequence|1021|1030|SAAGPPIAAT
***** No hits found ******
206|Sequence|1026|1035|PIAATPPAYS
***** No hits found ******
207|Sequence|1031|1040|PPAYSTQYVA
***** No hits found ******
208|Sequence|1036|1045|TQYVAYSPQQ
***** No hits found ******
209|Sequence|1041|1050|YSPQQFPNQP
***** No hits found ******
210|Sequence|1046|1055|FPNQPLVQHV
***** No hits found ******
211|Sequence|1051|1060|LVQHVPHYQS
***** No hits found ******
212|Sequence|1056|1065|PHYQSQHPHV
>sp|GLMS_STAES|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Staphylococcus epidermidis (strain
Query: 1 PHYQSQHPH 9
P+Y++ HPH
Sbjct: 80 PNYENSHPH 88
>sp|GLMS_STAEQ|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Staphylococcus epidermidis (strain
Query: 1 PHYQSQHPH 9
P+Y++ HPH
Sbjct: 80 PNYENSHPH 88
213|Sequence|1061|1070|QHPHVYSPVI
>sp|MNMA_PHYAS|TRNA-SPECIFIC 2-thiouridylase MnmA|Phytoplasma australiense
Query: 1 QHPHVYS 7
QHPH+YS
Sbjct: 283 QHPHLYS 289
>sp|HSLO_LACPL|33 kDa chaperonin|Lactiplantibacillus plantarum (strain ATCC BAA-793
Query: 1 QHPHVYSPV 9
QHPHV+ P+
Sbjct: 92 QHPHVHLPL 100
214|Sequence|1066|1075|YSPVIQGNAR
***** No hits found ******
215|Sequence|1071|1080|QGNARMMAPP
***** No hits found ******
216|Sequence|1076|1085|MMAPPTHAQP
>sp|RF3_SYNFM|PEPTIDE chain release factor 3|Syntrophobacter fumaroxidans (strain DSM
Query: 2 MAPPTHAQP 10
MAPP HA+P
Sbjct: 273 MAPPPHARP 281
217|Sequence|1081|1090|THAQPGLVSS
***** No hits found ******
218|Sequence|1086|1095|GLVSSSATQY
***** No hits found ******
219|Sequence|1091|1100|SATQYGAHEQ
***** No hits found ******
220|Sequence|1096|1105|GAHEQTHAMY
***** No hits found ******
221|Sequence|1101|1110|THAMYACPKL
***** No hits found ******
222|Sequence|1106|1115|ACPKLPYNKE
***** No hits found ******
223|Sequence|1111|1120|PYNKETSPSF
***** No hits found ******
224|Sequence|1116|1125|TSPSFYFAIS
***** No hits found ******
225|Sequence|1121|1130|YFAISTGSLA
***** No hits found ******
226|Sequence|1126|1135|TGSLAQQYAH
>sp|PHAZ_ECTOL|POLY(3-HYDROXYALKANOATE) depolymerase|Ectopseudomonas oleovorans (Pseudomonas oleovorans)
Query: 2 GSLAQQYAH 10
G+LAQQ+AH
Sbjct: 105 GALAQQFAH 113
>sp|TGT_GLOVI|QUEUINE tRNA-ribosyltransferase|Gloeobacter violaceus (strain ATCC 29082
Query: 1 TGSLAQQYAH 10
TGS AQ++AH
Sbjct: 357 TGSFAQEFAH 366
227|Sequence|1131|1140|QQYAHPNATL
***** No hits found ******
228|Sequence|1136|1145|PNATLHPHTP
>sp|CLPP1_BRADU|ATP-DEPENDENT Clp protease proteolytic subunit|Bradyrhizobium diazoefficiens
Query: 1 PNATLHPHTP 10
PNA+LH H P
Sbjct: 120 PNASLHVHQP 129
229|Sequence|1141|1150|HPHTPHPQPS
>sp|Y2456_MYCTU|UNCHARACTERIZED MFS-type transporter Rv2456c|Mycobacterium tuberculosis (strain
Query: 2 PHTPHPQPS 10
P PHPQPS
Sbjct: 204 PGEPHPQPS 212
>sp|Y2456_MYCTO|UNCHARACTERIZED MFS-type transporter MT2531|Mycobacterium tuberculosis (strain CDC
Query: 2 PHTPHPQPS 10
P PHPQPS
Sbjct: 204 PGEPHPQPS 212
>sp|PYRG_OCEIH|CTP synthase|Oceanobacillus iheyensis (strain DSM 14371
Query: 1 HPHTPHP 7
+PHTPHP
Sbjct: 407 NPHTPHP 413
>sp|DNAA_CORJK|CHROMOSOMAL replication initiator protein DnaA|Corynebacterium jeikeium (strain
Query: 2 PHTPHPQPS 10
PHTP PQPS
Sbjct: 222 PHTPSPQPS 230
230|Sequence|1146|1155|HPQPSATPTG
***** No hits found ******
231|Sequence|1151|1160|ATPTGQQQSQ
***** No hits found ******
232|Sequence|1156|1165|QQQSQHGGSH
***** No hits found ******
233|Sequence|1161|1170|HGGSHPAPSP
***** No hits found ******
234|Sequence|1166|1175|PAPSPVQHHQ
***** No hits found ******
235|Sequence|1171|1180|VQHHQHQAAQ
***** No hits found ******
236|Sequence|1176|1185|HQAAQALHLA
***** No hits found ******
237|Sequence|1181|1190|ALHLASPQQQ
***** No hits found ******
238|Sequence|1186|1195|SPQQQSAIYH
***** No hits found ******
239|Sequence|1191|1200|SAIYHAGLAP
***** No hits found ******
240|Sequence|1196|1205|AGLAPTPPSM
***** No hits found ******
241|Sequence|1201|1210|TPPSMTPASN
***** No hits found ******
242|Sequence|1206|1215|TPASNTQSPQ
***** No hits found ******
243|Sequence|1211|1220|TQSPQNSFPA
***** No hits found ******
244|Sequence|1216|1225|NSFPAAQQTV
***** No hits found ******
245|Sequence|1221|1230|AQQTVFTIHP
***** No hits found ******
246|Sequence|1226|1235|FTIHPSHVQP
***** No hits found ******
247|Sequence|1231|1240|SHVQPAYTNP
***** No hits found ******
248|Sequence|1236|1245|AYTNPPHMAH
***** No hits found ******
249|Sequence|1241|1250|PHMAHVPQAH
***** No hits found ******
250|Sequence|1246|1255|VPQAHVQSGM
***** No hits found ******
251|Sequence|1251|1260|VQSGMVPSHP
***** No hits found ******
252|Sequence|1256|1265|VPSHPTAHAP
***** No hits found ******
253|Sequence|1261|1270|TAHAPMMLMT
***** No hits found ******
254|Sequence|1266|1275|MMLMTTQPPG
***** No hits found ******
255|Sequence|1271|1280|TQPPGGPQAA
***** No hits found ******
256|Sequence|1276|1285|GPQAALAQSA
***** No hits found ******
257|Sequence|1281|1290|LAQSALQPIP
***** No hits found ******
258|Sequence|1286|1295|LQPIPVSTTA
***** No hits found ******
259|Sequence|1291|1300|VSTTAHFPYM
>sp|MURI_ACIC1|GLUTAMATE racemase|Acidothermus cellulolyticus (strain ATCC 43068
Query: 1 VSTTAHFPY 9
V+ TAHFPY
Sbjct: 34 VADTAHFPY 42
260|Sequence|1296|1305|HFPYMTHPSV
>sp|LPXK_TOLAT|TETRAACYLDISACCHARIDE 4'-kinase|Tolumonas auensis (strain DSM 9187
Query: 1 HFPYMTHP 8
H+PY+ HP
Sbjct: 92 HYPYLLHP 99
261|Sequence|1301|1313|THPSVQAHHQQQL
>sp|COAE_RHOPA|DEPHOSPHO-COA kinase|Rhodopseudomonas palustris (strain ATCC BAA-98
Query: 2 HPSVQAHHQQQL 13
HP ++AHHQQ L
Sbjct: 84 HPMLRAHHQQFL 95