ATX2_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|SRPAAAASRM

***** No hits found ******


2|SequenceR|15|6|TAVAPSRPAA

>sp|Y1052_THEAC|UNCHARACTERIZED solute-binding protein Ta1052|Thermoplasma acidophilum (strain

Query: 2 AVAPSRPA 9
A APS+PA
Sbjct: 36 ATAPSKPA 43




3|SequenceR|20|11|FRRSETAVAP

>sp|GLCDH_HALMA|GLUCOSE 1-dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 1 FRRSETAVAP 10
FRR E +AP
Sbjct: 99 FRRGEPDMAP 108




4|SequenceR|25|16|WRAAAFRRSE

>sp|ADEC_CENSY|ADENINE deaminase|Cenarchaeum symbiosum (strain A)

Query: 1 WRAAAFRR 8
W+ AAF R
Sbjct: 438 WKVAAFDR 445




5|SequenceR|30|21|SRWGPWRAAA

>sp|FLPA_ARCFU|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Archaeoglobus fulgidus (strain

Query: 3 WGPWRA 8
W PWR+
Sbjct: 36 WVPWRS 41


>sp|THII_THEAC|TRNA sulfurtransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RWGPWR 7
RW P+R
Sbjct: 221 RWAPYR 226


>sp|SOR_ACIAM|SULFUR oxygenase/reductase|Acidianus ambivalens (Desulfurolobus

Query: 3 WGPW 6
WGPW
Sbjct: 110 WGPW 113


>sp|THII_THEVO|TRNA sulfurtransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 RWGPWR 7
RW P+R
Sbjct: 221 RWSPYR 226


>sp|PYRC_THEKO|DIHYDROOROTASE kodakarensis (strain ATCC BAA-918

Query: 1 SRWGPWRA 8
++W PW
Sbjct: 363 AKWSPWEG 370


>sp|CCA_PYRIL|CCA-ADDING enzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SRWGPWR 7
SRW P+R
Sbjct: 202 SRWRPYR 208


>sp|NADA_HALMA|QUINOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 WGPWRA 8
W PW A
Sbjct: 211 WDPWDA 216


>sp|NADA_HALSA|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 WGPWRA 8
W PW A
Sbjct: 211 WDPWAA 216


>sp|NADA_HALS3|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 WGPWRA 8
W PW A
Sbjct: 211 WDPWAA 216




6|SequenceR|35|26|APRQLSRWGP

>sp|MSRA_NATPD|PEPTIDE methionine sulfoxide reductase MsrA|Natronomonas pharaonis

Query: 2 PRQLSRWGP 10
P QL+R GP
Sbjct: 80 PTQLNRQGP 88


>sp|MSRA_HALWD|PEPTIDE methionine sulfoxide reductase MsrA|Haloquadratum walsbyi (strain

Query: 2 PRQLSRWGP 10
P QL+R GP
Sbjct: 80 PTQLNRQGP 88


>sp|PDAD_THEVO|PYRUVOYL-DEPENDENT arginine decarboxylase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PRQLSRWG 9
PR S+WG
Sbjct: 93 PRDKSKWG 100


>sp|RS4E_THEVO|SMALL ribosomal subunit protein eS4|Thermoplasma volcanium (strain ATCC

Query: 2 PRQLSRWGP 10
PR+ WGP
Sbjct: 17 PRKTYFWGP 25


>sp|PDAD_THEAC|PYRUVOYL-DEPENDENT arginine decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PRQLSRWG 9
PR S+WG
Sbjct: 93 PRDRSKWG 100


>sp|RS4E_THEAC|SMALL ribosomal subunit protein eS4|Thermoplasma acidophilum (strain

Query: 2 PRQLSRWGP 10
PR+ WGP
Sbjct: 17 PRKTYFWGP 25


>sp|RS4E_ARCFU|SMALL ribosomal subunit protein eS4|Archaeoglobus fulgidus (strain ATCC

Query: 2 PRQLSRW 8
PR++S+W
Sbjct: 18 PRKVSKW 24


>sp|HFLX_HYPBU|GTPASE HflX|Hyperthermus butylicus (strain DSM 5456

Query: 2 PRQLSRW 8
PR L+RW
Sbjct: 15 PRGLARW 21


>sp|RIFK_THEPD|RIBOFLAVIN kinase|Thermofilum pendens (strain DSM 2475

Query: 1 APRQLSR 7
APR+LSR
Sbjct: 22 APRRLSR 28


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RQLSRWG 9
RQL WG
Sbjct: 460 RQLENWG 466


>sp|RNP3_METKA|RIBONUCLEASE P protein component 3|Methanopyrus kandleri (strain AV19 /

Query: 1 APRQLSRW 8
APR++ RW
Sbjct: 220 APREILRW 227


>sp|THII_METAC|PROBABLE tRNA sulfurtransferase|Methanosarcina acetivorans (strain ATCC

Query: 3 RQLSRWGP 10
RQL W P
Sbjct: 253 RQLQTWAP 260




7|SequenceR|40|31|RGSRRAPRQL

***** No hits found ******


8|SequenceR|45|36|AGGGGRGSRR

>sp|AROE_SULAC|SHIKIMATE dehydrogenase (NADP(+))|Sulfolobus acidocaldarius (strain ATCC

Query: 1 AGGGGRGS 8
AGG GR S
Sbjct: 127 AGGAGRAS 134


>sp|AROC_METS3|CHORISMATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 GGGRGSRR 10
GGGRGS R
Sbjct: 121 GGGRGSGR 128


>sp|GLCU_SACS2|GLUCOSE import system permease protein|Saccharolobus solfataricus (strain

Query: 2 GGGGRG 7
GGGG+G
Sbjct: 281 GGGGKG 286


>sp|ACDD2_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 AGGGGRGSR 9
A GG RG R
Sbjct: 121 ADGGSRGKR 129


>sp|ACDD1_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 AGGGGRGSR 9
A GG RG R
Sbjct: 121 ADGGSRGKR 129


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GGGGRGSRR 10
GGG RG R
Sbjct: 350 GGGARGLDR 358


>sp|ACDD_METMA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina mazei

Query: 1 AGGGGRGSR 9
A GG RG R
Sbjct: 121 ADGGSRGKR 129


>sp|ACDD1_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 AGGGGRGSR 9
A GG RG R
Sbjct: 121 ADGGSRGKR 129


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 GGGRGSR 9
GGG+G+R
Sbjct: 864 GGGKGNR 870


>sp|ACDD2_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 AGGGGRGSR 9
A GG RG R
Sbjct: 122 ADGGSRGKR 130


>sp|MTM4_METJA|TYPE II methyltransferase M.MjaIV|Methanocaldococcus jannaschii (strain

Query: 1 AGGGGRGSR 9
A GG RG R
Sbjct: 212 ANGGRRGGR 220


>sp|THPS_SULAC|THERMOPSIN acidocaldarius (strain ATCC 33909

Query: 2 GGGGRGS 8
GGGG G+
Sbjct: 263 GGGGNGA 269


>sp|Y1017_METAC|UPF0251 protein MA_1017|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GGGGRGSR 9
GG GRG R
Sbjct: 136 GGDGRGKR 143


>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AGGGGR 6
AGGGGR
Sbjct: 6 AGGGGR 11


>sp|Y2715_METAR|UPF0251 protein UNCMA_27150|Methanocella arvoryzae (strain DSM 22066

Query: 2 GGGGRGSR 9
GG GRG R
Sbjct: 136 GGDGRGKR 143


>sp|NASD_HALMT|ASSIMILATORY ferredoxin-dependent nitrite reductase|Haloferax mediterranei

Query: 3 GGGRGSRR 10
GGG GSR+
Sbjct: 225 GGGLGSRK 232


>sp|TRPF_METKA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanopyrus kandleri (strain AV19 /

Query: 1 AGGGGRGSR 9
A GGG G R
Sbjct: 140 AEGGGSGER 148


>sp|AROC_HALMA|CHORISMATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GGGGRGSRR 10
GGGGR S R
Sbjct: 121 GGGGRSSAR 129


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 3 GGGRGSRR 10
GGG G RR
Sbjct: 6 GGGDGERR 13




9|SequenceR|50|41|YPGPAAGGGG

>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 YPGPAAGGGG 10
Y GP G GG
Sbjct: 146 YAGPIRGAGG 155


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 YPGPAAGGGG 10
Y GP G GG
Sbjct: 143 YAGPIRGAGG 152


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 YPGPAAGGG 9
YPG AGGG
Sbjct: 571 YPGTFAGGG 579


>sp|Y1223_PYRHO|UNCHARACTERIZED ZPR1-like protein PH1223|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PGPAAGG 8
PGPAA G
Sbjct: 118 PGPAAEG 124


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 YPGPAAGGGG 10
Y GP G GG
Sbjct: 141 YAGPIRGAGG 150


>sp|WECC_METVS|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PGPAAGG 8
PGP GG
Sbjct: 253 PGPGVGG 259


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 PGPAAGG 8
PGP GG
Sbjct: 253 PGPGVGG 259


>sp|WECC_METM7|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 2 PGPAAGG 8
PGP GG
Sbjct: 253 PGPGVGG 259


>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 2 PGPAAGG 8
PGP GG
Sbjct: 253 PGPGVGG 259


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGPAAGG 8
PGP GG
Sbjct: 255 PGPGVGG 261


>sp|WECC_META3|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PGPAAGG 8
PGP GG
Sbjct: 258 PGPGVGG 264


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 YPGPAAGGG 9
YPG +GGG
Sbjct: 571 YPGTFSGGG 579


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 PAAGGGG 10
PAAG GG
Sbjct: 663 PAAGDGG 669


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 1 YPGPAAGGG 9
Y GP GGG
Sbjct: 491 YGGPIIGGG 499


>sp|Y1318_METJA|UNCHARACTERIZED protein MJ1318|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GPAAGG 8
GP+AGG
Sbjct: 108 GPSAGG 113


>sp|TRPC_METTH|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 4 PAAGGGG 10
PAA GGG
Sbjct: 39 PAAVGGG 45


>sp|PSTB_PYRFU|PHOSPHATE import ATP-binding protein PstB|Pyrococcus furiosus (strain ATCC

Query: 1 YPGPAAGG 8
YPG +GG
Sbjct: 146 YPGNLSGG 153


>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 PGPAAGGGG 10
PGPAA G
Sbjct: 809 PGPAAASYG 817


>sp|PSTB_THEKO|PHOSPHATE import ATP-binding protein PstB|Thermococcus kodakarensis (strain

Query: 1 YPGPAAGG 8
YPG +GG
Sbjct: 146 YPGNLSGG 153


>sp|HIS6_METS3|IMIDAZOLE glycerol phosphate synthase subunit|Methanobrevibacter smithii

Query: 2 PGPAAGGGG 10
P A+GGGG
Sbjct: 220 PVIASGGGG 228




10|SequenceR|55|46|PAASPYPGPA

>sp|GUAAB_PICTO|GMP synthase [glutamine-hydrolyzing] subunit B|Picrophilus torridus

Query: 1 PAASPYPGPA 10
P P+PGP
Sbjct: 180 PEVQPFPGPG 189


>sp|Y690_METJA|UNCHARACTERIZED protein MJ0690|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 YPGPA 10
YPGPA
Sbjct: 79 YPGPA 83


>sp|RRP4_THEAM|EXOSOME complex component Rrp4|Thermosphaera aggregans (strain DSM 11486

Query: 4 SPYPG 8
SPYPG
Sbjct: 96 SPYPG 100


>sp|GUAAB_SULTO|GMP synthase [glutamine-hydrolyzing] subunit B|Sulfurisphaera tokodaii

Query: 5 PYPGPA 10
P+PGP
Sbjct: 191 PFPGPG 196


>sp|GUAAB_SACS2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 5 PYPGPA 10
P+PGP
Sbjct: 192 PFPGPG 197


>sp|GUAAB_METVS|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus vannielii

Query: 5 PYPGPA 10
P+PGP
Sbjct: 187 PFPGPG 192


>sp|GUAAB_METMP|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 5 PYPGPA 10
P+PGP
Sbjct: 187 PFPGPG 192


>sp|GUAAB_METM7|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 5 PYPGPA 10
P+PGP
Sbjct: 187 PFPGPG 192


>sp|GUAAB_METJA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocaldococcus

Query: 5 PYPGPA 10
P+PGP
Sbjct: 187 PFPGPG 192


>sp|GUAAB_HALMA|GMP synthase [glutamine-hydrolyzing] subunit B|Haloarcula marismortui

Query: 5 PYPGPA 10
P+PGP
Sbjct: 187 PFPGPG 192


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 5 PYPGPA 10
P+PGP
Sbjct: 192 PFPGPG 197


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 5 PYPGPA 10
P+PGP
Sbjct: 192 PFPGPG 197


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 5 PYPGPA 10
P+PGP
Sbjct: 192 PFPGPG 197


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 5 PYPGPA 10
P+PGP
Sbjct: 192 PFPGPG 197


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 5 PYPGPA 10
P+PGP
Sbjct: 192 PFPGPG 197


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 5 PYPGPA 10
P+PGP
Sbjct: 192 PFPGPG 197


>sp|Y819_PYRHO|UNCHARACTERIZED methyltransferase PH0819|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 ASPYPG 8
A+PYPG
Sbjct: 372 ATPYPG 377


>sp|TRPB_META3|TRYPTOPHAN synthase beta chain|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 AASPYPGPA 10
A PYP P+
Sbjct: 188 AVGPYPFPS 196


>sp|GUAAB_METTH|GMP synthase [glutamine-hydrolyzing] subunit B|Methanothermobacter

Query: 5 PYPGPA 10
P+PGP
Sbjct: 185 PFPGPG 190


>sp|GUAAB_THEAC|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma acidophilum

Query: 5 PYPGPA 10
P+PGP
Sbjct: 186 PFPGPG 191


>sp|GUAAB_THEVO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma volcanium

Query: 5 PYPGPA 10
P+PGP
Sbjct: 186 PFPGPG 191


>sp|GATB_METS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanobrevibacter smithii (strain

Query: 1 PAASPYP 7
P A PYP
Sbjct: 42 PGAKPYP 48


>sp|GUAAB_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus furiosus

Query: 5 PYPGPA 10
P+PGP
Sbjct: 192 PFPGPG 197


>sp|GUAAB_NATPD|GMP synthase [glutamine-hydrolyzing] subunit B|Natronomonas pharaonis

Query: 5 PYPGPA 10
P+PGP
Sbjct: 187 PFPGPG 192


>sp|GUAAB_HALSA|GMP synthase [glutamine-hydrolyzing] subunit B|Halobacterium salinarum

Query: 5 PYPGPA 10
P+PGP
Sbjct: 187 PFPGPG 192


>sp|GUAAB_HALS3|GMP synthase [glutamine-hydrolyzing] subunit B|Halobacterium salinarum

Query: 5 PYPGPA 10
P+PGP
Sbjct: 187 PFPGPG 192


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 4 SPYPGP 9
S YPGP
Sbjct: 150 SDYPGP 155


>sp|GUAAB_THEKO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermococcus

Query: 5 PYPGPA 10
P+PGP
Sbjct: 186 PFPGPG 191


>sp|GUAAB_PYRHO|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus horikoshii

Query: 5 PYPGPA 10
P+PGP
Sbjct: 187 PFPGPG 192


>sp|GUAAB_PYRAB|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus abyssi

Query: 5 PYPGPA 10
P+PGP
Sbjct: 187 PFPGPG 192


>sp|GUAAB_METBU|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcoides

Query: 5 PYPGPA 10
P+PGP
Sbjct: 185 PFPGPG 190


>sp|GUAAB_HALLT|GMP synthase [glutamine-hydrolyzing] subunit B|Halorubrum lacusprofundi

Query: 5 PYPGPA 10
P+PGP
Sbjct: 187 PFPGPG 192


>sp|GUAAB_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit B|Archaeoglobus fulgidus

Query: 5 PYPGPA 10
P+PGP
Sbjct: 185 PFPGPG 190


>sp|RS4E_METKA|SMALL ribosomal subunit protein eS4|Methanopyrus kandleri (strain AV19

Query: 2 AASPYPGP 9
A PYPGP
Sbjct: 32 APRPYPGP 39


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 1 PAASPYP 7
P A PYP
Sbjct: 42 PGAKPYP 48


>sp|GATB_METTH|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanothermobacter thermautotrophicus

Query: 1 PAASPYP 7
P A PYP
Sbjct: 42 PGAKPYP 48


>sp|GUAAB_METAR|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocella arvoryzae

Query: 5 PYPGPA 10
P+PGP
Sbjct: 186 PFPGPG 191


>sp|THIM_METM7|HYDROXYETHYLTHIAZOLE kinase|Methanococcus maripaludis (strain C7 /

Query: 2 AASPYPG 8
A +PYPG
Sbjct: 231 AEAPYPG 237


>sp|GUAAB_METBF|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina barkeri

Query: 5 PYPGPA 10
P+PGP
Sbjct: 186 PFPGPG 191


>sp|GUAAB_METAC|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina

Query: 5 PYPGPA 10
P+PGP
Sbjct: 186 PFPGPG 191


>sp|GUAAB_METMA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina mazei

Query: 5 PYPGPA 10
P+PGP
Sbjct: 186 PFPGPG 191


>sp|GUAAB_METKA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanopyrus kandleri

Query: 5 PYPGPA 10
P+PGP
Sbjct: 188 PFPGPG 193




11|SequenceR|60|51|PGPPPPAASP

>sp|DNAK_NATPD|CHAPERONE protein DnaK|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PPPPAASP 10
PP PA +P
Sbjct: 437 PPAPAGTP 444


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 3 PPPPAASP 10
PP PA +P
Sbjct: 436 PPAPAGTP 443


>sp|CAS2B_PYRAE|CRISPR-ASSOCIATED endoribonuclease Cas2 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GPPPPA 7
GPPPPA
Sbjct: 79 GPPPPA 84


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 1 PGPPPPAA 8
PG P PAA
Sbjct: 345 PGEPAPAA 352


>sp|DNAK_HALWD|CHAPERONE protein DnaK|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PPPPAASP 10
PP PA +P
Sbjct: 437 PPAPAGTP 444


>sp|DNAK_HALMT|CHAPERONE protein DnaK|Haloferax mediterranei (strain ATCC 33500

Query: 3 PPPPAASP 10
PP PA +P
Sbjct: 437 PPAPAGTP 444


>sp|DNAK_HALLT|CHAPERONE protein DnaK|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 PPPPAASP 10
PP PA +P
Sbjct: 437 PPAPAGTP 444


>sp|DNAK_HALSA|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 700922

Query: 3 PPPPAASP 10
PP PA +P
Sbjct: 436 PPAPAGTP 443


>sp|DNAK_HALS3|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 29341

Query: 3 PPPPAASP 10
PP PA +P
Sbjct: 436 PPAPAGTP 443


>sp|TRPC_PYRAE|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PPPPAAS 9
PPPPA S
Sbjct: 19 PPPPARS 25


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GPPPPA 7
G PPPA
Sbjct: 299 GTPPPA 304


>sp|KPTA_AERPE|PROBABLE RNA 2'-phosphotransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGPPPP 6
PG PPP
Sbjct: 121 PGEPPP 126


>sp|PRIS_HALMA|DNA primase small subunit PriS|Haloarcula marismortui (strain ATCC

Query: 4 PPPAAS 9
PPPAA+
Sbjct: 24 PPPAAN 29


>sp|THII_AERPE|PROBABLE tRNA sulfurtransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PPPPAASP 10
PP P ASP
Sbjct: 350 PPNPRASP 357


>sp|RL1_PICTO|LARGE ribosomal subunit protein uL1|Picrophilus torridus (strain ATCC

Query: 1 PGPPPPAASP 10
P P PP P
Sbjct: 125 PRPVPPGQDP 134


>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PGPPPPAA 8
P PP PAA
Sbjct: 42 PRPPSPAA 49


>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 PGPPPPAASP 10
P P PP +P
Sbjct: 214 PAPEPPTDAP 223


>sp|KVAP_AERPE|VOLTAGE-GATED potassium channel|Aeropyrum pernix (strain ATCC 700893

Query: 2 GPPPPAASP 10
G P P+ SP
Sbjct: 254 GEPEPSCSP 262




12|SequenceR|65|56|SPPPGPGPPP

>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 SPPPGPGP 8
+PPP P P
Sbjct: 31 TPPPYPAP 38


>sp|ILVC_ARCFU|KETOL-ACID reductoisomerase (NAD(P)(+))|Archaeoglobus fulgidus (strain ATCC

Query: 3 PPGPGP 8
P GPGP
Sbjct: 131 PKGPGP 136


>sp|ILVC_SULTO|KETOL-ACID reductoisomerase (NADP(+))|Sulfurisphaera tokodaii (strain DSM

Query: 3 PPGPGP 8
P GPGP
Sbjct: 130 PKGPGP 135


>sp|ILVC_SACS2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 3 PPGPGP 8
P GPGP
Sbjct: 133 PKGPGP 138


>sp|ILVC_SACI2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 3 PPGPGP 8
P GPGP
Sbjct: 133 PKGPGP 138


>sp|ILVC_SACI1|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 3 PPGPGP 8
P GPGP
Sbjct: 133 PKGPGP 138


>sp|ILVC_SACI7|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 3 PPGPGP 8
P GPGP
Sbjct: 133 PKGPGP 138


>sp|ILVC_SACI6|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.16.4

Query: 3 PPGPGP 8
P GPGP
Sbjct: 133 PKGPGP 138


>sp|ILVC_SACI4|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.14.25

Query: 3 PPGPGP 8
P GPGP
Sbjct: 133 PKGPGP 138


>sp|ILVC_SACI3|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 3 PPGPGP 8
P GPGP
Sbjct: 133 PKGPGP 138


>sp|ILVC_METS5|KETOL-ACID reductoisomerase (NAD(P)(+))|Metallosphaera sedula (strain ATCC

Query: 3 PPGPGP 8
P GPGP
Sbjct: 133 PKGPGP 138


>sp|RRP42_METAC|EXOSOME complex component Rrp42|Methanosarcina acetivorans (strain ATCC

Query: 1 SPPPGPGPP 9
SP PGPP
Sbjct: 92 SPEFEPGPP 100


>sp|CARA_METVS|CARBAMOYL phosphate synthase small chain|Methanococcus vannielii (strain ATCC

Query: 2 PPPGPGP 8
P GPGP
Sbjct: 338 PEAGPGP 344


>sp|TRPG_SACS2|ANTHRANILATE synthase component 2|Saccharolobus solfataricus (strain ATCC

Query: 4 PGPGPP 9
PGPG P
Sbjct: 53 PGPGTP 58


>sp|CARA_METM7|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C7

Query: 2 PPPGPGP 8
P GPGP
Sbjct: 337 PEAGPGP 343


>sp|CARA_METMP|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain

Query: 2 PPPGPGP 8
P GPGP
Sbjct: 337 PEAGPGP 343


>sp|CARA_METM6|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C6

Query: 2 PPPGPGP 8
P GPGP
Sbjct: 337 PEAGPGP 343


>sp|CARA_METM5|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C5

Query: 2 PPPGPGP 8
P GPGP
Sbjct: 337 PEAGPGP 343


>sp|IPYR_PICTO|INORGANIC pyrophosphatase|Picrophilus torridus (strain ATCC 700027

Query: 3 PPGPGPP 9
PPGP PP
Sbjct: 12 PPGPNPP 18


>sp|RRP42_METMA|EXOSOME complex component Rrp42|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SPPPGPGPP 9
SP PGPP
Sbjct: 92 SPEFEPGPP 100


>sp|QUEC_PYRAE|7-CYANO-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PPGPG 7
PPGPG
Sbjct: 249 PPGPG 253


>sp|MRE11_METKA|DNA double-strand break repair protein|Methanopyrus kandleri (strain

Query: 1 SPPPGPGPP 9
SP P PG P
Sbjct: 211 SPAPYPGSP 219


>sp|RSMA_METBU|PROBABLE ribosomal RNA small subunit|Methanococcoides burtonii (strain DSM

Query: 2 PPPGPGPPP 10
PP PPP
Sbjct: 169 PPSAFSPPP 177


>sp|TRPG_ARCFU|ANTHRANILATE synthase component 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PGPGPP 9
PGPG P
Sbjct: 48 PGPGKP 53


>sp|RRP42_PYRFU|EXOSOME complex component Rrp42|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SPPPGPGPP 9
SP PGPP
Sbjct: 91 SPTFEPGPP 99


>sp|CARA_ARCFU|CARBAMOYL phosphate synthase small chain|Archaeoglobus fulgidus (strain ATCC

Query: 2 PPPGPGP 8
P GPGP
Sbjct: 334 PEAGPGP 340


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PGPGPPP 10
P PG PP
Sbjct: 283 PYPGEPP 289


>sp|RRP42_THEON|EXOSOME complex component Rrp42|Thermococcus onnurineus (strain NA1)

Query: 1 SPPPGPGPP 9
SP PGPP
Sbjct: 91 SPSFEPGPP 99


>sp|RL1_THEAC|LARGE ribosomal subunit protein uL1|Thermoplasma acidophilum (strain ATCC

Query: 3 PPGPGPPP 10
PPG P P
Sbjct: 134 PPGQDPAP 141


>sp|Y195_METB6|PUTATIVE HTH-type transcriptional regulatory protein|Methanoregula boonei

Query: 3 PPGPGPP 9
P GPG P
Sbjct: 204 PQGPGVP 210


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 SPPPGP 6
S PPGP
Sbjct: 481 SDPPGP 486


>sp|RRP42_THEKO|EXOSOME complex component Rrp42|Thermococcus kodakarensis (strain ATCC

Query: 1 SPPPGPGPP 9
SP PGPP
Sbjct: 91 SPTFEPGPP 99


>sp|CAS4_AERPE|CRISPR-ASSOCIATED exonuclease Cas4|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPPGPG 7
PPP PG
Sbjct: 171 PPPKPG 176


>sp|RRP42_THEGJ|EXOSOME complex component Rrp42|Thermococcus gammatolerans (strain DSM

Query: 1 SPPPGPGPP 9
SP PGPP
Sbjct: 91 SPTFEPGPP 99




13|SequenceR|70|61|PSSQRSPPPG

>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 PSSQRSPPP 9
P R+PPP
Sbjct: 519 PQEGRAPPP 527


>sp|RS11_METAC|SMALL ribosomal subunit protein uS11|Methanosarcina acetivorans (strain

Query: 2 SSQRSPPPG 10
+ QRSP PG
Sbjct: 81 NKQRSPGPG 89


>sp|RS11_METMA|SMALL ribosomal subunit protein uS11|Methanosarcina mazei (strain ATCC

Query: 2 SSQRSPPPG 10
+ QRSP PG
Sbjct: 81 NKQRSPGPG 89


>sp|RS11_METBF|SMALL ribosomal subunit protein uS11|Methanosarcina barkeri (strain

Query: 2 SSQRSPPPG 10
+ QRSP PG
Sbjct: 81 NKQRSPGPG 89


>sp|RS11_METMJ|SMALL ribosomal subunit protein uS11|Methanoculleus marisnigri (strain

Query: 4 QRSPPPG 10
QRSP PG
Sbjct: 83 QRSPGPG 89


>sp|RS11_METLZ|SMALL ribosomal subunit protein uS11|Methanocorpusculum labreanum

Query: 4 QRSPPPG 10
QRSP PG
Sbjct: 85 QRSPGPG 91


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 SSQRSPPP 9
+ +R+PPP
Sbjct: 899 TEERNPPP 906


>sp|RS11_METHJ|SMALL ribosomal subunit protein uS11|Methanospirillum hungatei JF-1

Query: 4 QRSPPPG 10
QRSP PG
Sbjct: 85 QRSPGPG 91


>sp|RS11_METB6|SMALL ribosomal subunit protein uS11|Methanoregula boonei (strain DSM

Query: 4 QRSPPPG 10
QRSP PG
Sbjct: 86 QRSPGPG 92




14|SequenceR|75|66|DSASPPSSQR

>sp|LEUC_PYRIL|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DSASPPSSQR 10
D SPP +QR
Sbjct: 63 DHLSPPPTQR 72


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM

Query: 1 DSASPPSSQR 10
D SPP +QR
Sbjct: 63 DHLSPPPNQR 72


>sp|LEUC_PYRAE|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 DSASPPSSQR 10
D SPP +QR
Sbjct: 63 DHLSPPPNQR 72


>sp|Y042_METJA|UNCHARACTERIZED protein MJ0042|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SASPPSSQR 10
S +PP SQR
Sbjct: 187 SENPPLSQR 195


>sp|THII_PYRAE|TRNA sulfurtransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 SASPPSSQ 9
+A PPSSQ
Sbjct: 472 NAVPPSSQ 479


>sp|LEUC_PYRNV|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum neutrophilum (strain DSM

Query: 1 DSASPPSSQR 10
D SPP +QR
Sbjct: 63 DHLSPPPTQR 72


>sp|Y1574_ARCFU|UNCHARACTERIZED protein AF_1574|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DSASPPSSQR 10
D+A PPS+ R
Sbjct: 223 DTACPPSAWR 232




15|SequenceR|80|71|NSGFCDSASP

>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 2 SGFCDSA 8
SG+CD A
Sbjct: 181 SGYCDMA 187




16|SequenceR|85|76|GGGNGNSGFC

>sp|RS6E_SULTO|SMALL ribosomal subunit protein eS6|Sulfurisphaera tokodaii (strain DSM

Query: 2 GGNGNSGF 9
GG+ NSGF
Sbjct: 153 GGSDNSGF 160


>sp|RS6E_SULAC|SMALL ribosomal subunit protein eS6|Sulfolobus acidocaldarius (strain

Query: 2 GGNGNSGF 9
GG+ NSGF
Sbjct: 153 GGSDNSGF 160


>sp|RS6E_SACS2|SMALL ribosomal subunit protein eS6|Saccharolobus solfataricus (strain

Query: 2 GGNGNSGF 9
GG+ NSGF
Sbjct: 154 GGSDNSGF 161


>sp|RS6E_SACI7|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 GGNGNSGF 9
GG+ NSGF
Sbjct: 154 GGSDNSGF 161


>sp|RS6E_SACI6|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 GGNGNSGF 9
GG+ NSGF
Sbjct: 154 GGSDNSGF 161


>sp|RS6E_SACI4|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 GGNGNSGF 9
GG+ NSGF
Sbjct: 154 GGSDNSGF 161


>sp|RS6E_SACI3|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 GGNGNSGF 9
GG+ NSGF
Sbjct: 154 GGSDNSGF 161


>sp|RS6E_SACI2|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 GGNGNSGF 9
GG+ NSGF
Sbjct: 154 GGSDNSGF 161


>sp|RS6E_HYPBU|SMALL ribosomal subunit protein eS6|Hyperthermus butylicus (strain DSM

Query: 2 GGNGNSGF 9
GG+ NSGF
Sbjct: 153 GGSDNSGF 160


>sp|RS6E_STAMF|SMALL ribosomal subunit protein eS6|Staphylothermus marinus (strain ATCC

Query: 2 GGNGNSGF 9
GG+ NSGF
Sbjct: 155 GGSDNSGF 162


>sp|COFH2_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina barkeri (strain

Query: 5 GNSGFC 10
GN GFC
Sbjct: 69 GNCGFC 74


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GGNGNSGFC 10
G GN+G C
Sbjct: 190 AGGGNAGAC 198


>sp|COFH2_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina mazei (strain ATCC

Query: 5 GNSGFC 10
GN GFC
Sbjct: 69 GNCGFC 74


>sp|CDC62_SACS2|ORC1-TYPE DNA replication protein 2|Saccharolobus solfataricus (strain ATCC

Query: 2 GGNGNS 7
GGNGN+
Sbjct: 256 GGNGNA 261


>sp|FNO_METJA|F420-DEPENDENT NADP reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGNGNSGF 9
GG G+ GF
Sbjct: 7 GGTGDQGF 14


>sp|Y373_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5

Query: 3 GNGNSGFC 10
G+G S FC
Sbjct: 41 GSGKSTFC 48


>sp|Y1815_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 3 GNGNSGFC 10
G+G S FC
Sbjct: 41 GSGKSTFC 48


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 189 GGGNAGEC 196


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 189 GGGNAGEC 196


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 194 GGGNAGEC 201


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 189 GGGNAGEC 196


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 189 GGGNAGEC 196


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GGNGNSGFC 10
G GN+G C
Sbjct: 190 AGGGNAGPC 198


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GGNGNSGFC 10
G GN+G C
Sbjct: 190 AGGGNAGPC 198


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GGNGNSGFC 10
G GN+G C
Sbjct: 190 AGGGNAGPC 198


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GGNGNSGFC 10
G GN+G C
Sbjct: 192 AGGGNAGPC 200


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GGGNGN 6
G GNGN
Sbjct: 79 GAGNGN 84


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 196 GGGNAGPC 203


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 195 GGGNAGPC 202


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 195 GGGNAGPC 202


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 195 GGGNAGPC 202


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 195 GGGNAGPC 202


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 195 GGGNAGPC 202


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 195 GGGNAGPC 202


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 195 GGGNAGPC 202


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 193 GGGNAGPC 200


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 193 GGGNAGPC 200


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 193 GGGNAGPC 200


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 193 GGGNAGPC 200


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 193 GGGNAGPC 200


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 196 GGGNAGPC 203


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 191 GGGNAGPC 198


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GNGNSGFC 10
G GN+G C
Sbjct: 193 GGGNAGPC 200


>sp|Y1359_METJA|UPF0273 protein MJ1359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGGNGNSGFC 10
G G G S FC
Sbjct: 30 GPGTGKSIFC 39


>sp|TRUB_PICTO|PROBABLE tRNA pseudouridine synthase B|Picrophilus torridus (strain ATCC

Query: 2 GGNGNSGF 9
GG G+ GF
Sbjct: 331 GGTGSKGF 338


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 1 GGGNGNSGF 9
GGGN +SG
Sbjct: 430 GGGNCSSGL 438


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GGGNGN 6
GGG GN
Sbjct: 864 GGGKGN 869


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GGGNGNSGFC 10
GGG N+G C
Sbjct: 577 GGGLLNTGSC 586


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GGGNGNSGFC 10
GGG N+G C
Sbjct: 577 GGGLLNTGSC 586


>sp|VORB_METTM|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter marburgensis

Query: 1 GGGNGN 6
GGG+GN
Sbjct: 127 GGGHGN 132


>sp|VORB_METTH|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter thermautotrophicus

Query: 1 GGGNGN 6
GGG+GN
Sbjct: 127 GGGHGN 132


>sp|Y963_METJA|UNCHARACTERIZED protein MJ0963|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGGNGNSGFC 10
G NG SG C
Sbjct: 463 GVNNGYSGAC 472




17|SequenceR|90|81|GPRFAGGGNG

>sp|METK_PYRIL|S-ADENOSYLMETHIONINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GPRFAGG 7
PRF GG
Sbjct: 70 APRFGGG 76


>sp|METK_THEON|S-ADENOSYLMETHIONINE synthase|Thermococcus onnurineus (strain NA1)

Query: 2 PRFAGG 7
PRF GG
Sbjct: 77 PRFGGG 82


>sp|METK_PYRHO|S-ADENOSYLMETHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PRFAGG 7
PRF GG
Sbjct: 74 PRFGGG 79


>sp|METK_PYRFU|S-ADENOSYLMETHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PRFAGG 7
PRF GG
Sbjct: 74 PRFGGG 79


>sp|METK_PYRAB|S-ADENOSYLMETHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 PRFAGG 7
PRF GG
Sbjct: 74 PRFGGG 79


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PRFAGG 7
PRF GG
Sbjct: 74 PRFGGG 79


>sp|METK_HYPBU|S-ADENOSYLMETHIONINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 GPRFAGG 7
PRF GG
Sbjct: 73 APRFGGG 79


>sp|METK_PYRNV|S-ADENOSYLMETHIONINE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PRFAGG 7
PRF GG
Sbjct: 71 PRFGGG 76


>sp|METK_PICTO|S-ADENOSYLMETHIONINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 PRFAGG 7
PRF GG
Sbjct: 78 PRFGGG 83


>sp|METK_PYRAE|S-ADENOSYLMETHIONINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PRFAGG 7
PRF GG
Sbjct: 71 PRFGGG 76


>sp|SFSA_CALMQ|SUGAR fermentation stimulation protein homolog|Caldivirga maquilingensis

Query: 2 PRFAGG 7
PRF+GG
Sbjct: 108 PRFSGG 113


>sp|LYSZ_PYRAB|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrococcus abyssi

Query: 3 RFAGGG 8
R+AGGG
Sbjct: 209 RYAGGG 214


>sp|COXX_AERPE|PROTOHEME IX farnesyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GPRFAGGGN 9
G FAGGG+
Sbjct: 37 GAYFAGGGS 45


>sp|PYRDA_AERPE|PUTATIVE dihydroorotate dehydrogenase A (fumarate)|Aeropyrum pernix (strain

Query: 2 PRFAGGG 8
P FAGGG
Sbjct: 133 PHFAGGG 139




18|SequenceR|95|86|LLRRSGPRFA

>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 1 LLRRSGPRFA 10
++RR GP F
Sbjct: 163 IMRRKGPAFG 172


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LLRRSGPRFA 10
++RR GP F
Sbjct: 163 IMRRKGPAFG 172


>sp|RIBL_HALMD|FAD synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 LRRSGPRFA 10
+RR+GPR A
Sbjct: 115 VRRAGPRKA 123


>sp|LYEL_HALJT|LYCOPENE elongase/hydratase|Haloarcula japonica (strain ATCC 49778

Query: 1 LLRRSGPRF 9
LLR S PRF
Sbjct: 23 LLRLSRPRF 31


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LRRSGPRF 9
LR++GP++
Sbjct: 35 LRKNGPKY 42


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LRRSGPRF 9
LR++GP++
Sbjct: 35 LRKNGPKY 42


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LRRSGPR 8
L+R+GPR
Sbjct: 139 LKRAGPR 145


>sp|RTCA_PYRNV|RNA 3'-terminal phosphate cyclase|Pyrobaculum neutrophilum (strain DSM

Query: 2 LRRSGPRF 9
L R+GPR+
Sbjct: 330 LERAGPRY 337


>sp|SRP54_HYPBU|SIGNAL recognition particle 54 kDa|Hyperthermus butylicus (strain DSM

Query: 1 LLRRSGP 7
LL+RSGP
Sbjct: 14 LLKRSGP 20


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain

Query: 2 LRRSGPR 8
LRR+GP+
Sbjct: 67 LRRAGPK 73




19|SequenceR|100|91|PGGLGLLRRS

>sp|RFCL_METB6|REPLICATION factor C large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 PGGLGLLRRS 10
P GLGL RS
Sbjct: 269 PAGLGLAYRS 278


>sp|DPO4_SULAC|DNA polymerase IV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PGGLGLLR 8
P GLG++R
Sbjct: 161 PNGLGVIR 168


>sp|DPO4_SACSO|DNA polymerase IV|Saccharolobus solfataricus (Sulfolobus solfataricus)

Query: 1 PGGLGLLR 8
P GLG++R
Sbjct: 161 PNGLGVIR 168


>sp|IMDH_KORCO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GGLGLLRRS 10
GGLG+L R+
Sbjct: 65 GGLGILHRN 73


>sp|Y620_METKA|UPF0425 pyridoxal phosphate-dependent protein MK0620|Methanopyrus kandleri

Query: 3 GLGLLRR 9
GLGLLRR
Sbjct: 296 GLGLLRR 302


>sp|IMDH_PYRAB|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 2 GGLGLLRRS 10
GGLG++ R+
Sbjct: 71 GGLGVIHRN 79


>sp|IMDH_PYRHO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GGLGLLRRS 10
GGLG++ R+
Sbjct: 71 GGLGVIHRN 79


>sp|IMDH_PYRFU|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GGLGLLRRS 10
GGLG++ R+
Sbjct: 71 GGLGVIHRN 79


>sp|FAU1_NATPD|PROBABLE ribonuclease FAU-1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PGGLGLLRR 9
PGGL LRR
Sbjct: 160 PGGLVELRR 168


>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 1 PGGLGL 6
PGGLG+
Sbjct: 201 PGGLGI 206


>sp|HEM1_AERPE|GLUTAMYL-TRNA reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGGLGLLR 8
PGG GL+R
Sbjct: 71 PGGEGLVR 78


>sp|TRPB_THEGJ|TRYPTOPHAN synthase beta chain|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PGGLGL 6
PGGLG+
Sbjct: 201 PGGLGI 206


>sp|TRPB_THEON|TRYPTOPHAN synthase beta chain|Thermococcus onnurineus (strain NA1)

Query: 1 PGGLGL 6
PGGLG+
Sbjct: 201 PGGLGI 206




20|SequenceR|105|96|VFPRPPGGLG

>sp|PCCA_HALMT|PROPIONYL-COA carboxylase, biotin carboxylase and|Haloferax mediterranei (strain

Query: 5 PPGGLG 10
PPGG+G
Sbjct: 359 PPGGIG 364


>sp|GLYA_STAMF|SERINE hydroxymethyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 2 FPRPPGGL 9
FP P GGL
Sbjct: 234 FPGPQGGL 241


>sp|AGLD_HALVD|GLYCOSYLTRANSFERASE AglD|Haloferax volcanii (strain ATCC 29605

Query: 1 VFPRPPGGLG 10
V P PGG+G
Sbjct: 543 VLPLSPGGVG 552


>sp|GLYA_SULAC|SERINE hydroxymethyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 FPRPPGGL 9
FP P GGL
Sbjct: 230 FPGPQGGL 237


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PRPPGGL 9
P+PP GL
Sbjct: 19 PKPPEGL 25


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain

Query: 1 VFPRPP 6
+FP+PP
Sbjct: 79 LFPKPP 84


>sp|RL15_HALWD|LARGE ribosomal subunit protein uL15|Haloquadratum walsbyi (strain DSM

Query: 2 FPRPPGG 8
F RPPG
Sbjct: 52 FKRPPGA 58


>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FPRPPGGLG 10
PRP GLG
Sbjct: 100 LPRPDVGLG 108


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter

Query: 1 VFPRPP 6
+FP+PP
Sbjct: 79 LFPKPP 84


>sp|GLYA_PYRAE|SERINE hydroxymethyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FPRPPGGL 9
FP P GGL
Sbjct: 228 FPGPQGGL 235


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 3 PRPPGGLG 10
P P GGLG
Sbjct: 552 PLPIGGLG 559


>sp|PYCA_ARCFU|PYRUVATE carboxylase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RPPGGLG 10
R PGG+G
Sbjct: 356 RSPGGIG 362


>sp|GLYA_PYRAR|SERINE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 FPRPPGGL 9
FP P GGL
Sbjct: 228 FPGPQGGL 235


>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 FPRPPGGLG 10
PRP GLG
Sbjct: 98 LPRPDIGLG 106


>sp|GLYA_METTM|SERINE hydroxymethyltransferase|Methanothermobacter marburgensis (strain

Query: 2 FPRPPGGL 9
FP P GG+
Sbjct: 229 FPGPQGGI 236


>sp|GLYA_METTH|SERINE hydroxymethyltransferase|Methanothermobacter thermautotrophicus

Query: 2 FPRPPGGL 9
FP P GG+
Sbjct: 229 FPGPQGGI 236


>sp|GLYA_METST|SERINE hydroxymethyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 2 FPRPPGGL 9
FP P GG+
Sbjct: 228 FPGPQGGI 235


>sp|GLYA_METS3|SERINE hydroxymethyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 FPRPPGGL 9
FP P GG+
Sbjct: 229 FPGPQGGI 236


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 4 RPPGGLG 10
+P GGLG
Sbjct: 289 KPEGGLG 295


>sp|GLCD3_SACS2|GLUCOSE 1-dehydrogenase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FPRPPGG 8
F RPP G
Sbjct: 53 FSRPPNG 59


>sp|PYCA_METTH|PYRUVATE carboxylase subunit A|Methanothermobacter thermautotrophicus

Query: 4 RPPGGLG 10
R PGG+G
Sbjct: 358 RSPGGIG 364


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 FPRPPG 7
FPRP G
Sbjct: 608 FPRPEG 613


>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 FPRPPGGL 9
FP P GG+
Sbjct: 231 FPGPQGGV 238


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 VFPRPPGGLG 10
V+PR P +G
Sbjct: 579 VYPRAPSRIG 588


>sp|GLYA_METAR|SERINE hydroxymethyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 2 FPRPPGGL 9
FP P GG+
Sbjct: 227 FPGPQGGI 234


>sp|EHAA_METKA|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex membrane|Methanopyrus

Query: 1 VFPRPPGG 8
VFPRP G
Sbjct: 90 VFPRPEAG 97


>sp|GLYA_PYRIL|SERINE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 FPRPPGGL 9
FP P GG+
Sbjct: 228 FPGPQGGV 235


>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 FPRPPGGL 9
FP P GG+
Sbjct: 230 FPGPQGGI 237


>sp|TRPB_THEON|TRYPTOPHAN synthase beta chain|Thermococcus onnurineus (strain NA1)

Query: 3 PRPPGGLG 10
P PGGLG
Sbjct: 198 PNHPGGLG 205


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 FPRPPGGL 9
FP P GG+
Sbjct: 238 FPGPQGGI 245


>sp|AROE_AERPE|SHIKIMATE dehydrogenase (NADP(+))|Aeropyrum pernix (strain ATCC 700893

Query: 1 VFPRPPGGL 9
V P PPGGL
Sbjct: 166 VEPVPPGGL 174


>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 FPRPPGGL 9
FP P GG+
Sbjct: 228 FPGPQGGI 235


>sp|GLYA_PYRNV|SERINE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 FPRPPGGL 9
FP P GG+
Sbjct: 228 FPGPQGGV 235


>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 3 PRPPGGLG 10
P PGGLG
Sbjct: 198 PNHPGGLG 205


>sp|TRPB_THEGJ|TRYPTOPHAN synthase beta chain|Thermococcus gammatolerans (strain DSM 15229

Query: 3 PRPPGGLG 10
P PGGLG
Sbjct: 198 PNHPGGLG 205


>sp|MDH_PYRCJ|MALATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 FPRPPG 7
FPR PG
Sbjct: 78 FPRKPG 83


>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 VFPRPPGG 8
+ PRP GG
Sbjct: 1 MIPRPHGG 8




21|SequenceR|110|101|PLLLVVFPRP

>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PLLLVVFPR 9
PLLL ++P+
Sbjct: 425 PLLLAIYPK 433


>sp|ADHS2_ARCFU|PUTATIVE 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase

Query: 1 PLLLVVFPR 9
PLL +++PR
Sbjct: 141 PLLAMMYPR 149


>sp|ADHS1_ARCFU|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PLLLVVFPR 9
PLL +++PR
Sbjct: 138 PLLAMMYPR 146


>sp|Y2042_PYRFU|UPF0215 protein PF2042|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PLLLVVFPRP 10
PL++VV RP
Sbjct: 101 PLIVVVRKRP 110


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 4 LVVFPR 9
LVVFPR
Sbjct: 214 LVVFPR 219


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LVVFPR 9
LVVFPR
Sbjct: 214 LVVFPR 219




22|SequenceR|115|106|GPSALPLLLV

>sp|ARSD_HALSA|PUTATIVE arsenical resistance operon repressor|Halobacterium salinarum

Query: 1 GPSALPLLLV 10
GPS LP+ +V
Sbjct: 70 GPSILPITVV 79


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GPSALPLL 8
GP A PLL
Sbjct: 513 GPRAAPLL 520




23|SequenceR|120|111|AAPPAGPSAL

>sp|RL11_METJA|LARGE ribosomal subunit protein uL11|Methanocaldococcus jannaschii

Query: 1 AAPPAGPS 8
A PP GP+
Sbjct: 17 AGPPLGPA 24




24|SequenceR|125|116|SARTPAAPPA

>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 3 RTPAAPPA 10
+TP PPA
Sbjct: 282 QTPGIPPA 289


>sp|Y1096_ARCFU|UNCHARACTERIZED protein AF_1096|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PAAPPA 10
PAAPP+
Sbjct: 43 PAAPPS 48




25|SequenceR|130|121|RAGLPSARTP

>sp|PURQ_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RAGLPSARTP 10
RAG SARTP
Sbjct: 57 RAGAISARTP 66


>sp|PURQ_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosarcina barkeri (strain Fusaro /

Query: 1 RAGLPSARTP 10
RAG +ARTP
Sbjct: 58 RAGAIAARTP 67


>sp|PURQ_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RAGLPSARTP 10
RAG +ARTP
Sbjct: 58 RAGAIAARTP 67


>sp|PURQ_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosarcina acetivorans (strain ATCC

Query: 1 RAGLPSARTP 10
RAG +ARTP
Sbjct: 58 RAGAIAARTP 67


>sp|MOAE_HALVD|PROBABLE molybdopterin synthase|Haloferax volcanii (strain ATCC 29605

Query: 2 AGLPSARTP 10
+G P AR P
Sbjct: 83 SGFPDARVP 91


>sp|COFE_HALSA|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 AGLPSAR 8
AGLP+AR
Sbjct: 168 AGLPAAR 174


>sp|COFE_HALS3|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 AGLPSAR 8
AGLP+AR
Sbjct: 168 AGLPAAR 174


>sp|COFE_NATPD|COENZYME F420:L-glutamate ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 AGLPSAR 8
AGLP+AR
Sbjct: 166 AGLPAAR 172


>sp|HTPX_THEKO|PROTEASE HtpX homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RAGLPSART 9
RAGLP+ R
Sbjct: 82 RAGLPTPRV 90


>sp|HTPX_THEGJ|PROTEASE HtpX homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 1 RAGLPSART 9
RAGLP+ R
Sbjct: 82 RAGLPTPRV 90




26|SequenceR|135|126|RPPSARAGLP

>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PPSARAGLP 10
PP+ + GLP
Sbjct: 219 PPAPKEGLP 227


>sp|RL15_AERPE|LARGE ribosomal subunit protein uL15|Aeropyrum pernix (strain ATCC

Query: 2 PPSARAGL 9
PP RAGL
Sbjct: 64 PPRIRAGL 71


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 PPSARAGLP 10
PP+ + G+P
Sbjct: 406 PPAYKGGMP 414


>sp|MPTN_METAC|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 ARAGLP 10
ARAGLP
Sbjct: 117 ARAGLP 122


>sp|LYSK_PYRAE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrobaculum aerophilum

Query: 2 PPSARAG 8
PP ARAG
Sbjct: 241 PPKARAG 247




27|SequenceR|140|131|LSVGSRPPSA

>sp|PUS10_HALLT|TRNA pseudouridine synthase Pus10|Halorubrum lacusprofundi (strain

Query: 2 SVGSRPP 8
+VG+RPP
Sbjct: 91 NVGTRPP 97


>sp|Y486_METJA|UNCHARACTERIZED protein MJ0486|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSVGSRP 7
LS+G+RP
Sbjct: 131 LSIGTRP 137


>sp|GUAAB_METTH|GMP synthase [glutamine-hydrolyzing] subunit B|Methanothermobacter

Query: 1 LSVGSRPPS 9
LSV +PPS
Sbjct: 295 LSVSDKPPS 303


>sp|PFDB_METPE|PREFOLDIN subunit beta|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LSVGSRPPSA 10
L G+RPP+A
Sbjct: 111 LEGGNRPPNA 120


>sp|G1PDH_THEPD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermofilum pendens (strain DSM 2475

Query: 1 LSVGSRPPSA 10
LS+ +RPP+A
Sbjct: 134 LSIFTRPPAA 143


>sp|TRPB_PYRHO|TRYPTOPHAN synthase beta chain|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LSVGSRPPSA 10
LS+ RPP+A
Sbjct: 449 LSMAPRPPNA 458


>sp|PFDA_METBU|PREFOLDIN subunit alpha|Methanococcoides burtonii (strain DSM 6242

Query: 2 SVGSRPP 8
+VG+RPP
Sbjct: 131 AVGNRPP 137


>sp|G1PDH_METHJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LSVGSRPPSA 10
+SVG+ PP A
Sbjct: 150 VSVGAHPPIA 159




28|SequenceR|145|136|PAPRALSVGS

>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 1 PAPRALSVGS 10
P P+ +S+GS
Sbjct: 557 PEPKVISMGS 566


>sp|SALAC_HALSA|SALACTIN salinarum (strain ATCC 700922

Query: 1 PAPRALSVGS 10
PAP + VGS
Sbjct: 23 PAPLGVKVGS 32


>sp|RL2_NANEQ|LARGE ribosomal subunit protein uL2|Nanoarchaeum equitans (strain

Query: 1 PAPRALSVGS 10
PAP +SVG
Sbjct: 70 PAPLGISVGD 79




29|SequenceR|150|141|PRPCGPAPRA

>sp|HIS8_METBU|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PCGPAPRA 10
P GP+P+A
Sbjct: 46 PLGPSPKA 53


>sp|HIS8_METST|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PCGPAPRA 10
P GP+P+A
Sbjct: 43 PWGPSPKA 50


>sp|SPEB_METJA|AGMATINASE jannaschii (strain ATCC 43067

Query: 1 PRPCGPAPR 9
P PCG + R
Sbjct: 226 PEPCGFSTR 234


>sp|HIS81_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PCGPAPRA 10
P GP+P+A
Sbjct: 10 PYGPSPKA 17


>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 3 PCGPAPRA 10
P GP+P A
Sbjct: 50 PLGPSPAA 57


>sp|Y1251_PYRAB|RUTC family protein PYRAB12510|Pyrococcus abyssi (strain GE5 /

Query: 1 PRPCGPAPRA 10
P+P GP +A
Sbjct: 12 PKPIGPYSQA 21


>sp|Y854_PYRHO|RUTC family protein PH0854|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PRPCGPAPRA 10
P+P GP +A
Sbjct: 11 PKPIGPYSQA 20


>sp|FOLD_METHJ|BIFUNCTIONAL protein FolD|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PRPCGP 6
PRPC P
Sbjct: 131 PRPCTP 136


>sp|RIDA_PYRFU|2-IMINOBUTANOATE/2-IMINOPROPANOATE deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PRPCGPAPRA 10
P+P GP +A
Sbjct: 11 PKPIGPYSQA 20


>sp|HIS8_HALSA|HISTIDINOL-PHOSPHATE aminotransferase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PCGPAPRA 10
P GP+P+A
Sbjct: 41 PHGPSPKA 48


>sp|HIS8_HALS3|HISTIDINOL-PHOSPHATE aminotransferase|Halobacterium salinarum (strain ATCC 29341

Query: 3 PCGPAPRA 10
P GP+P+A
Sbjct: 41 PHGPSPKA 48


>sp|HIS8_NATPD|HISTIDINOL-PHOSPHATE aminotransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PCGPAPRA 10
P GP+P+A
Sbjct: 41 PFGPSPKA 48


>sp|Y811_SULTO|RUTC family protein STK_08110|Sulfurisphaera tokodaii (strain DSM

Query: 1 PRPCGPAPRA 10
P+P GP +A
Sbjct: 10 PKPVGPYSQA 19


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PCGPAPR 9
PC PA R
Sbjct: 25 PCNPADR 31


>sp|HIS8_METBF|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PCGPAPRA 10
P GP+P+A
Sbjct: 48 PLGPSPKA 55


>sp|HIS8_METMA|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PCGPAPRA 10
P GP+P+A
Sbjct: 50 PLGPSPKA 57


>sp|HIS8_METAC|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PCGPAPRA 10
P GP+P+A
Sbjct: 49 PLGPSPKA 56


>sp|HIS8_METKA|HISTIDINOL-PHOSPHATE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 PCGPAPRA 10
P GP+P+A
Sbjct: 54 PLGPSPKA 61




30|SequenceR|155|146|VPECAPRPCG

>sp|BE_THEKO|1,4-ALPHA-GLUCAN branching enzyme TK1436|Thermococcus kodakarensis (strain ATCC

Query: 1 VPECAPRPCG 10
+PECA RP G
Sbjct: 181 LPECAYRPAG 190


>sp|Y1363_METJA|UNCHARACTERIZED protein MJ1363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPECAPRP 8
VP CAPRP
Sbjct: 126 VPGCAPRP 133


>sp|VHUA_METJA|F420-NON-REDUCING hydrogenase vhu subunit A|Methanocaldococcus jannaschii (strain

Query: 1 VPECAPRPCG 10
VP PR CG
Sbjct: 53 VPRIVPRICG 62


>sp|VHUA_METVO|F420-NON-REDUCING hydrogenase vhu subunit A|Methanococcus voltae

Query: 1 VPECAPRPCG 10
VP PR CG
Sbjct: 53 VPRIVPRICG 62


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VPECAPRPCG 10
VP C + CG
Sbjct: 430 VPWCGSKECG 439


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VPECAPRPCG 10
VP C + CG
Sbjct: 430 VPWCGSKECG 439


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VPECAPRPCG 10
VP C + CG
Sbjct: 430 VPWCGSKECG 439


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VPECAPRPCG 10
VP C + CG
Sbjct: 430 VPWCGSKECG 439


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VPECAPRPCG 10
VP C + CG
Sbjct: 430 VPWCGSKECG 439


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VPECAPRPCG 10
VP C + CG
Sbjct: 430 VPWCGSKECG 439


>sp|NNR_METKA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanopyrus kandleri (strain

Query: 1 VPECAPRPCG 10
+PE A R CG
Sbjct: 207 IPEIAERICG 216


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VPECAPRPCG 10
+P C R CG
Sbjct: 428 IPWCGKRECG 437


>sp|SYP_METMA|PROLINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VPECAPRPCG 10
+P C R CG
Sbjct: 428 IPWCGKRECG 437


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CAPRPC 9
C P PC
Sbjct: 89 CVPTPC 94


>sp|FPOB_METMA|F(420)H(2) dehydrogenase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VPECAPRP 8
+P C PRP
Sbjct: 153 IPGCPPRP 160


>sp|MOAC_METLZ|PROBABLE cyclic pyranopterin monophosphate synthase|Methanocorpusculum

Query: 1 VPECAPRPCG 10
+P C P P G
Sbjct: 73 IPMCHPLPVG 82


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 2 PECAPRPCG 10
P PR CG
Sbjct: 54 PRIVPRICG 62


>sp|PUS10_KORCO|TRNA pseudouridine synthase Pus10|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PECAPRPC 9
PEC R C
Sbjct: 150 PECGGRGC 157


>sp|MVHA_METTM|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter marburgensis (strain

Query: 2 PECAPRPCG 10
P PR CG
Sbjct: 54 PRIVPRICG 62


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 4 CAPRPCG 10
C P CG
Sbjct: 97 CTPEKCG 103


>sp|MVHA_METTH|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter thermautotrophicus

Query: 2 PECAPRPCG 10
P PR CG
Sbjct: 54 PRIVPRICG 62


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VPECAPRPCG 10
VP C CG
Sbjct: 430 VPWCGSNECG 439


>sp|QUEC_METLZ|7-CYANO-7-DEAZAGUANINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 PECAPR 7
P+C PR
Sbjct: 133 PDCTPR 138


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 VPECAPRPC 9
+ EC+ PC
Sbjct: 902 IQECSRTPC 910


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VPECAPRPC 9
+P C+ PC
Sbjct: 211 LPYCSTSPC 219


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 1 VPECAPRPCG 10
VP+ A R CG
Sbjct: 55 VPKIASRVCG 64


>sp|SYP_METAC|PROLINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VPECAPRPCG 10
+P C + CG
Sbjct: 428 IPWCGKKECG 437


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VPECAPRPCG 10
VP C CG
Sbjct: 426 VPWCGEEKCG 435


>sp|HIS8_HALMA|HISTIDINOL-PHOSPHATE aminotransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VPECAPRPCG 10
+PEC CG
Sbjct: 330 LPECIRITCG 339


>sp|HIS8_HALWD|HISTIDINOL-PHOSPHATE aminotransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VPECAPRPCG 10
+PEC CG
Sbjct: 330 LPECVRISCG 339




31|SequenceR|160|151|TLPGYVPECA

>sp|Y1311_METJA|UNCHARACTERIZED protein MJ1311|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PGYVPE 8
PGY+PE
Sbjct: 120 PGYIPE 125


>sp|RSMA_NATPD|PROBABLE ribosomal RNA small subunit|Natronomonas pharaonis (strain ATCC

Query: 2 LPGYVPECA 10
LPGY+P+ A
Sbjct: 33 LPGYLPDSA 41


>sp|LYSK_PYRHO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus horikoshii

Query: 1 TLPGYVP 7
T+PGY+P
Sbjct: 69 TVPGYIP 75


>sp|LYSK_PYRAB|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus abyssi

Query: 1 TLPGYVP 7
T+PGY+P
Sbjct: 70 TVPGYIP 76


>sp|LYSK_PYRFU|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus furiosus

Query: 1 TLPGYVP 7
T+PGY+P
Sbjct: 69 TVPGYIP 75


>sp|CDC61_SULTO|ORC1-TYPE DNA replication protein 1|Sulfurisphaera tokodaii (strain DSM

Query: 2 LPGYVPE 8
LP YVPE
Sbjct: 25 LPDYVPE 31


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LPGYVP 7
+PGYVP
Sbjct: 339 IPGYVP 344


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LPGYVP 7
+PGYVP
Sbjct: 339 IPGYVP 344


>sp|UBAA_HALVD|SAMP-ACTIVATING enzyme E1|Haloferax volcanii (strain ATCC 29605

Query: 3 PGYVPECA 10
PG VP+CA
Sbjct: 182 PGTVPDCA 189


>sp|CDC61_SULAC|ORC1-TYPE DNA replication protein 1|Sulfolobus acidocaldarius (strain ATCC

Query: 2 LPGYVPE 8
LP Y+PE
Sbjct: 25 LPDYIPE 31


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TLPGYVPECA 10
TLPG + +C+
Sbjct: 403 TLPGKLADCS 412


>sp|CYAS_METMA|CYSTEATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LPGYVPE 8
LPG VPE
Sbjct: 192 LPGMVPE 198


>sp|GATD_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina barkeri (strain Fusaro /

Query: 3 PGYVPECA 10
PG P+CA
Sbjct: 292 PGMEPKCA 299


>sp|GATD_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina acetivorans (strain ATCC

Query: 3 PGYVPECA 10
PG P+CA
Sbjct: 292 PGMEPKCA 299


>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 TLPGYVPE 8
+LPG VPE
Sbjct: 190 SLPGIVPE 197


>sp|Y457_METJA|UNCHARACTERIZED metallohydrolase MJ0457|Methanocaldococcus jannaschii (strain ATCC

Query: 1 TLPGYV 6
T+PGYV
Sbjct: 270 TIPGYV 275


>sp|Y1398_METMP|UNCHARACTERIZED metallohydrolase MMP1398|Methanococcus maripaludis (strain DSM

Query: 1 TLPGYV 6
T+PGYV
Sbjct: 271 TIPGYV 276


>sp|RIFK_HALMA|RIBOFLAVIN kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TLPGYVPE 8
TLPGY+ +
Sbjct: 205 TLPGYMEQ 212


>sp|CDPAS_METMJ|CDP-ARCHAEOL synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LPGYVPECA 10
+P YVP A
Sbjct: 2 IPAYVPNSA 10


>sp|GATD_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina mazei (strain ATCC

Query: 3 PGYVPECA 10
PG P+CA
Sbjct: 293 PGMEPKCA 300


>sp|AMZA_THEKO|ARCHAEMETZINCIN kodakarensis (strain ATCC BAA-918

Query: 2 LPGYVPEC 9
LP Y P C
Sbjct: 167 LPYYCPNC 174


>sp|RS17_NANEQ|SMALL ribosomal subunit protein uS17|Nanoarchaeum equitans (strain

Query: 2 LPGYVPEC 9
+ Y+PEC
Sbjct: 68 ITAYLPEC 75


>sp|Y1080_METJA|UNCHARACTERIZED protein MJ1080|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LPGYVP 7
+PGY+P
Sbjct: 73 MPGYLP 78


>sp|MPGP_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LPGYVPECA 10
+PGY P+ A
Sbjct: 14 IPGYEPDPA 22


>sp|CYAS_METAC|CYSTEATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LPGYVPE 8
LPG VPE
Sbjct: 192 LPGMVPE 198


>sp|RASEA_METAC|ARCHAEOSINE synthase subunit beta|Methanosarcina acetivorans (strain ATCC

Query: 1 TLPGYVPECA 10
T+ GYV +CA
Sbjct: 60 TMCGYVYDCA 69


>sp|CYAS_METHJ|CYSTEATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 TLPGYVPE 8
TLPG PE
Sbjct: 189 TLPGIFPE 196


>sp|CDPAS_HALLT|CDP-ARCHAEOL synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 LPGYVPECA 10
LP YVP A
Sbjct: 14 LPAYVPNNA 22


>sp|CDPAS_HALSA|CDP-ARCHAEOL synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LPGYVPECA 10
LP YVP A
Sbjct: 15 LPAYVPNNA 23


>sp|CDPAS_HALS3|CDP-ARCHAEOL synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LPGYVPECA 10
LP YVP A
Sbjct: 15 LPAYVPNNA 23


>sp|CDC61_AERPE|ORC1-TYPE DNA replication protein 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 LPGYVPEC 9
LP YVP+
Sbjct: 21 LPDYVPDV 28


>sp|F16PA_HALWD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Haloquadratum walsbyi (strain DSM 16790

Query: 4 GYVPECA 10
GY+ ECA
Sbjct: 260 GYIIECA 266


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 2 LPGYVPE 8
LPGY P+
Sbjct: 179 LPGYKPK 185




32|SequenceR|165|156|PKLSMTLPGY

>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 PKLSMTLPGY 10
P++S+T+P Y
Sbjct: 594 PRVSLTMPKY 603


>sp|PUR5_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PKLSMTLPGY 10
PK S++L GY
Sbjct: 328 PKYSVSLMGY 337


>sp|DAPAT_METMP|LL-DIAMINOPIMELATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 5 MTLPGY 10
MT+PGY
Sbjct: 135 MTVPGY 140


>sp|AGL5_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl5|Haloferax volcanii

Query: 1 PKLSMTLPGY 10
PK+S +PG+
Sbjct: 222 PKVSEEVPGF 231


>sp|LEUC1_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 1 PKLSMTLPG 9
P+L + LPG
Sbjct: 108 PELGLVLPG 116


>sp|IF2P_STAMF|PROBABLE translation initiation factor IF-2|Staphylothermus marinus

Query: 1 PKLSMTLPG 9
PKL + +PG
Sbjct: 72 PKLKIEIPG 80


>sp|DAPAT_METJA|LL-DIAMINOPIMELATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 MTLPGY 10
MT+PGY
Sbjct: 135 MTVPGY 140


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PKLSMTLPG 9
P+L + LPG
Sbjct: 109 PELGLVLPG 117


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 5 MTLPGY 10
+TLPGY
Sbjct: 337 LTLPGY 342


>sp|Y1436_METJA|UNCHARACTERIZED protein MJ1436|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKLSMTLPGY 10
P+++M L GY
Sbjct: 8 PRMTMALGGY 17




33|SequenceR|170|161|QQQQQPKLSM

***** No hits found ******


34|SequenceR|175|166|QQQQQQQQQQ

***** No hits found ******


35|SequenceR|180|171|QQQQQQQQQQ

***** No hits found ******


36|SequenceR|185|176|QQQQQQQQQQ

***** No hits found ******


37|SequenceR|190|181|PPQQQQQQQQ

>sp|SYE_METTH|GLUTAMATE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PQQQQQQQQ 10
P++QQQ+ +
Sbjct: 62 PEEQQQEME 70




38|SequenceR|195|186|NAAAPPPQQQ

>sp|SYY_THEAC|TYROSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NAAAPPPQQ 9
NAA PPQQ
Sbjct: 243 NAAYCPPQQ 251


>sp|LEUC_PYRCJ|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum calidifontis (strain DSM

Query: 4 APPPQQQ 10
APPP Q+
Sbjct: 66 APPPTQR 72




39|SequenceR|200|191|GPKRVNAAAP

>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 1 GPKRVNAAA 9
GP+RVN A
Sbjct: 343 GPERVNMEA 351


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GPKRVNAAA 9
GP+R+N A
Sbjct: 343 GPERINMEA 351


>sp|EF2_METS3|ELONGATION factor 2|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GPKRVNAAA 9
GP+RVN A
Sbjct: 343 GPERVNTDA 351


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GPKRVNAAA 9
GP+R+N A
Sbjct: 343 GPERINMEA 351


>sp|EF2_PYRHO|ELONGATION factor 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GPKRVNAAA 9
GP+R+N A
Sbjct: 343 GPERINMEA 351




40|SequenceR|205|196|LLGSGGPKRV

>sp|RNP3_METBF|RIBONUCLEASE P protein component 3|Methanosarcina barkeri (strain Fusaro /

Query: 1 LLGSGGPKRV 10
LL S GP+RV
Sbjct: 143 LLHSRGPRRV 152


>sp|AROE_NITMS|SHIKIMATE dehydrogenase (NADP(+))|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LLGSGGPKR 9
LLG+GG R
Sbjct: 124 LLGAGGAAR 132


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LLGSGGPKRV 10
+LG G PK +
Sbjct: 618 MLGKGNPKEL 627


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LLGSGGPKRV 10
LG G PK +
Sbjct: 620 FLGKGDPKEI 629


>sp|PSB1_STAMF|PROTEASOME subunit beta 1|Staphylothermus marinus (strain ATCC 43588

Query: 2 LGSGGP 7
LGSGGP
Sbjct: 145 LGSGGP 150


>sp|AROE_METM7|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain C7 /

Query: 1 LLGSGGPKR 9
++GSGG R
Sbjct: 128 IIGSGGASR 136


>sp|SYFA_METS5|PHENYLALANINE--TRNA ligase alpha subunit|Metallosphaera sedula (strain ATCC 51363

Query: 4 SGGPKRV 10
SG PKR+
Sbjct: 319 SGAPKRI 325


>sp|CARA_METKA|CARBAMOYL phosphate synthase small chain|Methanopyrus kandleri (strain AV19 /

Query: 3 GSGGPKRV 10
G G PKRV
Sbjct: 225 GPGDPKRV 232




41|SequenceR|210|201|AAPSALLGSG

>sp|MTM1_METJA|TYPE II methyltransferase M.MjaI|Methanocaldococcus jannaschii (strain

Query: 3 PSALLGSG 10
P+A LGSG
Sbjct: 150 PNAFLGSG 157


>sp|CAS4_SACS2|CRISPR-ASSOCIATED exonuclease Cas4|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 APSALLG 8
APSA+LG
Sbjct: 52 APSAILG 58


>sp|KADA_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AAPSALLG 8
AAPS +LG
Sbjct: 119 AAPSEILG 126


>sp|Y643_PYRHO|UNCHARACTERIZED protein PH0643|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PSALLGSG 10
PSAL+G G
Sbjct: 52 PSALIGPG 59




42|SequenceR|215|206|SPSPAAAPSA

>sp|TRUA_PYRCJ|TRNA pseudouridine synthase A|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PSPAAAPSA 10
P P A PSA
Sbjct: 192 PRPGAVPSA 200


>sp|G3P_SULTO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PSPAAAPS 9
P PA+ PS
Sbjct: 186 PDPASVPS 193


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SPSPAAAPS 9
SP P APS
Sbjct: 518 SPGPLPAPS 526


>sp|TRUA_PYRAE|TRNA pseudouridine synthase A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PSPAAAPSA 10
P P A PSA
Sbjct: 192 PRPGAVPSA 200


>sp|TRUA_PYRAR|TRNA pseudouridine synthase A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PSPAAAPSA 10
P P A PSA
Sbjct: 192 PRPGAVPSA 200


>sp|CDC6D_HALMA|ORC1-TYPE DNA replication protein 4|Haloarcula marismortui (strain ATCC

Query: 1 SPSPAAAPS 9
+P+PA+ PS
Sbjct: 7 NPAPASDPS 15


>sp|G3P_PYRIL|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PSPAAAPS 9
P+PA PS
Sbjct: 186 PNPATVPS 193


>sp|IDH_HALVD|ISOCITRATE dehydrogenase [NADP]|Haloferax volcanii (strain ATCC 29605

Query: 2 PSPAAAPSA 10
PSP PSA
Sbjct: 136 PSPVKNPSA 144




43|SequenceR|220|211|SVSSSSPSPA

>sp|PYLS_METBU|PYRROLYSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SVSSSSPSPA 10
SVS+S P+P+
Sbjct: 127 SVSNSIPTPS 136


>sp|RL29_THEAC|LARGE ribosomal subunit protein uL29|Thermoplasma acidophilum (strain

Query: 1 SVSSSSPSPA 10
S+ SSPSP
Sbjct: 38 SMGGSSPSPG 47




44|SequenceR|225|216|TASSSSVSSS

***** No hits found ******


45|SequenceR|230|221|VSSPATASSS

>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 1 VSSPATASSS 10
+SSPATA +S
Sbjct: 399 LSSPATAGAS 408


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 1 VSSPATASSS 10
+SSPATA +S
Sbjct: 399 LSSPATAGAS 408


>sp|Y2023_ARCFU|UNCHARACTERIZED protein AF_2023|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SSPATASSS 10
SSP TAS S
Sbjct: 136 SSPGTASLS 144




46|SequenceR|235|226|STAAVVSSPA

***** No hits found ******


47|SequenceR|240|231|PRGGGSTAAV

>sp|RTCA_METMA|RNA 3'-terminal phosphate cyclase|Methanosarcina mazei (strain ATCC

Query: 1 PRGGGSTAAV 10
PRGGGS +AV
Sbjct: 158 PRGGGSVSAV 167


>sp|SRP54_PYRCJ|SIGNAL recognition particle 54 kDa|Pyrobaculum calidifontis (strain DSM

Query: 2 RGGGSTAAV 10
RGGG+ AAV
Sbjct: 250 RGGGALAAV 258


>sp|RTCA_METAC|RNA 3'-terminal phosphate cyclase|Methanosarcina acetivorans (strain

Query: 1 PRGGGSTAAV 10
PRGGG +AV
Sbjct: 158 PRGGGEVSAV 167


>sp|SRP54_PYRIL|SIGNAL recognition particle 54 kDa|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RGGGSTAAV 10
RGGG+ AAV
Sbjct: 251 RGGGALAAV 259


>sp|SRP54_PYRAE|SIGNAL recognition particle 54 kDa|Pyrobaculum aerophilum (strain ATCC

Query: 2 RGGGSTAAV 10
RGGG+ AAV
Sbjct: 251 RGGGALAAV 259


>sp|SRP54_PYRAR|SIGNAL recognition particle 54 kDa|Pyrobaculum arsenaticum (strain DSM

Query: 2 RGGGSTAAV 10
RGGG+ AAV
Sbjct: 251 RGGGALAAV 259


>sp|SRP54_PYRNV|SIGNAL recognition particle 54 kDa|Pyrobaculum neutrophilum (strain DSM

Query: 2 RGGGSTAAV 10
RGGG+ AAV
Sbjct: 251 RGGGALAAV 259


>sp|PYRH_SULTO|URIDYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GGGSTA 8
GGGSTA
Sbjct: 42 GGGSTA 47


>sp|PYRH_SACS2|URIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GGGSTA 8
GGGSTA
Sbjct: 43 GGGSTA 48


>sp|PYRH_SACI7|URIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 GGGSTA 8
GGGSTA
Sbjct: 42 GGGSTA 47


>sp|PYRH_SACI6|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 GGGSTA 8
GGGSTA
Sbjct: 42 GGGSTA 47


>sp|PYRH_SACI4|URIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GGGSTA 8
GGGSTA
Sbjct: 42 GGGSTA 47


>sp|PYRH_SACI3|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 GGGSTA 8
GGGSTA
Sbjct: 42 GGGSTA 47


>sp|PYRH_SACI2|URIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 GGGSTA 8
GGGSTA
Sbjct: 42 GGGSTA 47


>sp|PYRH_SACI1|URIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 GGGSTA 8
GGGSTA
Sbjct: 42 GGGSTA 47


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 RGGGSTAA 9
RG G TAA
Sbjct: 148 RGAGGTAA 155


>sp|TRPE1_HALMA|ANTHRANILATE synthase component 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 PRGGGSTAAV 10
PR GG+ AA+
Sbjct: 75 PRAGGTLAAL 84


>sp|SRP54_HALMA|SIGNAL recognition particle 54 kDa|Haloarcula marismortui (strain ATCC

Query: 2 RGGGSTAAV 10
+GGG+ AAV
Sbjct: 249 KGGGALAAV 257


>sp|SRP54_NATPD|SIGNAL recognition particle 54 kDa|Natronomonas pharaonis (strain ATCC

Query: 2 RGGGSTAAV 10
+GGG+ AAV
Sbjct: 249 KGGGALAAV 257


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 PRGGGSTA 8
PRGGG+ A
Sbjct: 117 PRGGGALA 124


>sp|PGK_METLZ|PHOSPHOGLYCERATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 GGGSTAAV 10
GGG TAAV
Sbjct: 354 GGGHTAAV 361


>sp|PMDHS_THESM|PHOSPHOMEVALONATE dehydratase small subunit|Thermococcus sibiricus (strain DSM

Query: 1 PRGGGSTA 8
PRG GST
Sbjct: 57 PRGKGSTV 64


>sp|PMDHS_THEKO|PHOSPHOMEVALONATE dehydratase small subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 PRGGGSTA 8
PRG GST
Sbjct: 57 PRGKGSTV 64


>sp|PMDHS_THEON|PHOSPHOMEVALONATE dehydratase small subunit|Thermococcus onnurineus (strain NA1)

Query: 1 PRGGGST 7
PRG GST
Sbjct: 57 PRGKGST 63


>sp|PMDHS_THEGJ|PHOSPHOMEVALONATE dehydratase small subunit|Thermococcus gammatolerans (strain DSM

Query: 1 PRGGGST 7
PRG GST
Sbjct: 57 PRGKGST 63


>sp|PMDHS_PYRFU|PHOSPHOMEVALONATE dehydratase small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PRGGGSTA 8
PRG GST
Sbjct: 57 PRGKGSTV 64




48|SequenceR|245|236|GRGLGPRGGG

>sp|GUAAA_METTH|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothermobacter

Query: 2 RGLGPR 7
RGLGPR
Sbjct: 114 RGLGPR 119


>sp|RTCA_HALSA|RNA 3'-terminal phosphate cyclase|Halobacterium salinarum (strain ATCC

Query: 2 RGLGPRGGG 10
RG PRGGG
Sbjct: 163 RGFYPRGGG 171


>sp|RTCA_HALS3|RNA 3'-terminal phosphate cyclase|Halobacterium salinarum (strain ATCC

Query: 2 RGLGPRGGG 10
RG PRGGG
Sbjct: 163 RGFYPRGGG 171


>sp|DAPAT_METS3|LL-DIAMINOPIMELATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GRGLGPRGGG 10
G G GP G G
Sbjct: 377 GSGFGPSGEG 386


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GRGLGPRGGG 10
G G GP G G
Sbjct: 377 GAGFGPSGEG 386


>sp|FAE_METBF|5,6,7,8-TETRAHYDROMETHANOPTERIN hydro-lyase|Methanosarcina barkeri (strain Fusaro /

Query: 4 LGPRGG 9
+GPRGG
Sbjct: 38 IGPRGG 43


>sp|NARC_HALMT|PROBABLE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 2 RGLGPRGG 9
RGL P+GG
Sbjct: 249 RGLTPKGG 256


>sp|LEU1_METJA|2-ISOPROPYLMALATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GLGPRGG 9
GLG RGG
Sbjct: 242 GLGERGG 248


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 GRGLGPRGGG 10
G G GP G G
Sbjct: 376 GSGFGPSGEG 385


>sp|RTCA_METJA|RNA 3'-terminal phosphate cyclase|Methanocaldococcus jannaschii (strain

Query: 2 RGLGPRGGG 10
RG P GGG
Sbjct: 156 RGFYPEGGG 164


>sp|GUAAA_METBU|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcoides

Query: 2 RGLGPR 7
+GLGPR
Sbjct: 116 KGLGPR 121


>sp|RS19E_SACS2|SMALL ribosomal subunit protein eS19|Saccharolobus solfataricus (strain

Query: 1 GRGLGPRG 8
GR L P+G
Sbjct: 124 GRSLSPKG 131


>sp|GLYA_METBF|SERINE hydroxymethyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 5 GPRGG 9
GPRGG
Sbjct: 230 GPRGG 234


>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 GLGPRG 8
GLGP+G
Sbjct: 347 GLGPQG 352


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 GLGPRG 8
GLGP+G
Sbjct: 348 GLGPQG 353


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 GLGPRG 8
GLGP+G
Sbjct: 348 GLGPQG 353


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 GLGPRG 8
GLGP+G
Sbjct: 348 GLGPQG 353


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 GLGPRG 8
GLGP+G
Sbjct: 348 GLGPQG 353


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 GLGPRG 8
GLGP+G
Sbjct: 348 GLGPQG 353


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 GLGPRG 8
GLGP+G
Sbjct: 348 GLGPQG 353


>sp|BACH_HALHM|HALORHODOPSIN halobium (strain mex)

Query: 1 GRGLGPRGG 9
G G GP GG
Sbjct: 63 GMGAGPEGG 71


>sp|HEM1_HALSA|GLUTAMYL-TRNA reductase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GRGLGPRGGG 10
G G P GGG
Sbjct: 74 GAGFNPAGGG 83


>sp|HEM1_HALS3|GLUTAMYL-TRNA reductase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GRGLGPRGGG 10
G G P GGG
Sbjct: 74 GAGFNPAGGG 83


>sp|GLYA_METMA|SERINE hydroxymethyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 GPRGG 9
GPRGG
Sbjct: 230 GPRGG 234


>sp|GUAAA_METMA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina mazei

Query: 2 RGLGPR 7
RGLGP+
Sbjct: 116 RGLGPK 121


>sp|GLYA_METAC|SERINE hydroxymethyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 5 GPRGG 9
GPRGG
Sbjct: 230 GPRGG 234


>sp|GUAAA_METBF|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina barkeri

Query: 2 RGLGPRG 8
RGLGP+
Sbjct: 116 RGLGPKA 122


>sp|GUAAA_METAC|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina

Query: 2 RGLGPR 7
RGLGP+
Sbjct: 116 RGLGPK 121


>sp|GLYA_METTP|SERINE hydroxymethyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 5 GPRGG 9
GPRGG
Sbjct: 230 GPRGG 234


>sp|GLYA_METHJ|SERINE hydroxymethyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 5 GPRGG 9
GPRGG
Sbjct: 230 GPRGG 234




49|SequenceR|250|241|KNSNRGRGLG

>sp|Y4223_METAC|UPF0228 protein MA_4223|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 NSNRGRGL 9
NSN GRG+
Sbjct: 63 NSNIGRGM 70


>sp|Y393_METMA|UPF0228 protein MM_0393|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NSNRGRGL 9
NSN GRG+
Sbjct: 63 NSNIGRGM 70


>sp|CDAT8_METKA|TRNA(CYTOSINE(8)) deaminase|Methanopyrus kandleri (strain AV19 /

Query: 5 RGRGLG 10
RGRGLG
Sbjct: 87 RGRGLG 92


>sp|Y3117_METAC|UPF0228 protein MA_3117|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 NSNRGRGL 9
NSN GRG+
Sbjct: 66 NSNIGRGV 73


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 NRGRGL 9
NRGRG+
Sbjct: 414 NRGRGI 419


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 4 NRGRGL 9
NRGRG+
Sbjct: 414 NRGRGI 419


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 4 NRGRGL 9
NRGRG+
Sbjct: 414 NRGRGI 419


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 4 NRGRGL 9
NRGRG+
Sbjct: 414 NRGRGI 419


>sp|Y1207_METJA|UNCHARACTERIZED N-acetyltransferase MJ1207|Methanocaldococcus jannaschii (strain

Query: 5 RGRGLG 10
RGRG+G
Sbjct: 166 RGRGIG 171


>sp|THSA_THEKO|CHAPERONIN subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KNSNRGRGLG 10
++ NRG G+G
Sbjct: 469 EHKNRGLGIG 478


>sp|THSA_THEK1|CHAPERONIN subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 1 KNSNRGRGLG 10
++ NRG G+G
Sbjct: 469 EHKNRGLGIG 478


>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 1 KNSNRGRGLG 10
KNS GR +G
Sbjct: 121 KNSFHGRSMG 130


>sp|MVP5K_THEAC|MEVALONATE-3-PHOSPHATE 5-kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 RGRGLG 10
RGRG+G
Sbjct: 172 RGRGIG 177




50|SequenceR|255|246|SQPLGKNSNR

***** No hits found ******


51|SequenceR|260|251|DFSITSQPLG

>sp|ARCH_METBF|PROTEIN archease|Methanosarcina barkeri (strain Fusaro /

Query: 1 DFSITSQPLG 10
++SIT+Q LG
Sbjct: 98 EYSITAQALG 107


>sp|CBIM_HALS3|PUTATIVE cobalt transport protein CbiM|Halobacterium salinarum (strain ATCC

Query: 2 FSITSQPLG 10
FSIT P+G
Sbjct: 183 FSITQIPIG 191




52|SequenceR|265|256|NAYIGDFSIT

>sp|RS19_SULTO|SMALL ribosomal subunit protein uS19|Sulfurisphaera tokodaii (strain DSM

Query: 3 YIGDFSIT 10
Y+G+FSIT
Sbjct: 109 YLGEFSIT 116


>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NAYIGDFSIT 10
+A+IG+FS T
Sbjct: 445 SAFIGEFSFT 454


>sp|KHSE_THEKO|HOMOSERINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 AYIGDFSI 9
AY GDF+I
Sbjct: 135 AYYGDFTI 142


>sp|KHSE_THEGJ|HOMOSERINE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 AYIGDFSI 9
AY GDF+I
Sbjct: 135 AYYGDFTI 142


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 1 NAYIGDFSIT 10
+ YIG+F +T
Sbjct: 227 DGYIGNFEVT 236


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 1 NAYIGDFSIT 10
+ YIG+F +T
Sbjct: 224 DGYIGNFDVT 233


>sp|RS19_METJA|SMALL ribosomal subunit protein uS19|Methanocaldococcus jannaschii

Query: 3 YIGDFSIT 10
Y+G+FS+T
Sbjct: 122 YLGEFSLT 129


>sp|CIMA_SULAC|(R)-CITRAMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YIGDFSIT 10
Y+GDF+ T
Sbjct: 292 YVGDFAFT 299


>sp|RS8_THEKO|SMALL ribosomal subunit protein uS8|Thermococcus kodakarensis (strain

Query: 1 NAYIGDFSI 9
N YIG+F +
Sbjct: 44 NGYIGEFEL 52


>sp|RS19_PYRIL|SMALL ribosomal subunit protein uS19|Pyrobaculum islandicum (strain DSM

Query: 3 YIGDFSIT 10
Y+G+F+IT
Sbjct: 130 YLGEFAIT 137


>sp|RS19_CALMQ|SMALL ribosomal subunit protein uS19|Caldivirga maquilingensis (strain

Query: 3 YIGDFSIT 10
Y+G+F+IT
Sbjct: 157 YLGEFAIT 164


>sp|RS19_SULAC|SMALL ribosomal subunit protein uS19|Sulfolobus acidocaldarius (strain

Query: 3 YIGDFSIT 10
Y+G++SIT
Sbjct: 109 YLGEYSIT 116


>sp|RS19_SACS2|SMALL ribosomal subunit protein uS19|Saccharolobus solfataricus (strain

Query: 3 YIGDFSIT 10
Y+G++SIT
Sbjct: 109 YLGEYSIT 116


>sp|RS8_THEPD|SMALL ribosomal subunit protein uS8|Thermofilum pendens (strain DSM

Query: 1 NAYIGDFSI 9
+ YIGDF +
Sbjct: 43 SGYIGDFEL 51


>sp|PURP_ARCFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Archaeoglobus fulgidus (strain ATCC

Query: 1 NAYIGDF 7
NAYIG F
Sbjct: 97 NAYIGKF 103


>sp|RS8_THESM|SMALL ribosomal subunit protein uS8|Thermococcus sibiricus (strain DSM

Query: 1 NAYIGDF 7
N YIG+F
Sbjct: 44 NGYIGEF 50


>sp|RS8_METJA|SMALL ribosomal subunit protein uS8|Methanocaldococcus jannaschii

Query: 1 NAYIGDF 7
N YIG+F
Sbjct: 44 NGYIGEF 50


>sp|RS8_THEON|SMALL ribosomal subunit protein uS8|Thermococcus onnurineus (strain

Query: 1 NAYIGDF 7
N YIG+F
Sbjct: 44 NGYIGEF 50


>sp|RS19_NANEQ|SMALL ribosomal subunit protein uS19|Nanoarchaeum equitans (strain

Query: 3 YIGDFSIT 10
Y+G+FS T
Sbjct: 110 YLGEFSFT 117


>sp|RS8_THEGJ|SMALL ribosomal subunit protein uS8|Thermococcus gammatolerans (strain

Query: 1 NAYIGDF 7
N YIG+F
Sbjct: 44 NGYIGEF 50


>sp|RS19_METS5|SMALL ribosomal subunit protein uS19|Metallosphaera sedula (strain ATCC

Query: 3 YIGDFSI 9
Y+G+FSI
Sbjct: 109 YLGEFSI 115


>sp|CBIMQ_METLZ|PUTATIVE fused cobalt transport protein|Methanocorpusculum labreanum (strain

Query: 3 YIGDFSIT 10
Y+G FSIT
Sbjct: 182 YLGIFSIT 189




53|SequenceR|270|261|HVMRMNAYIG

>sp|LACC_HALVD|LACCASE volcanii (strain ATCC 29605

Query: 2 VMRMNAYIG 10
+ R+NAY G
Sbjct: 198 ITRLNAYAG 206


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 HVMRMNAYIG 10
HV+R A+IG
Sbjct: 841 HVVREPAWIG 850




54|SequenceR|275|266|VSTLIHVMRM

>sp|UPP_METM6|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 STLIHVMR 9
STLIHV+R
Sbjct: 147 STLIHVLR 154


>sp|UPP_METM5|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 STLIHVMR 9
STLIHV++
Sbjct: 147 STLIHVLK 154


>sp|UPP_METMP|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 STLIHVMR 9
STLIHV++
Sbjct: 147 STLIHVLK 154


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 VSTLIHVMRM 10
V L+HV+R+
Sbjct: 209 VDMLLHVLRL 218


>sp|ENDA_HYPBU|TRNA-SPLICING endonuclease|Hyperthermus butylicus (strain DSM 5456

Query: 4 LIHVMRM 10
L+HVMR+
Sbjct: 130 LVHVMRV 136




55|SequenceR|280|271|CKSGVVSTLI

>sp|HMGCS_METS5|HYDROXYMETHYLGLUTARYL-COA synthase|Metallosphaera sedula (strain ATCC 51363

Query: 2 KSGVVSTLI 10
K G+VSTLI
Sbjct: 257 KQGMVSTLI 265


>sp|PSA_PYRAE|PROTEASOME subunit alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CKSGVVST 8
CK+GVV T
Sbjct: 43 CKAGVVLT 50


>sp|HUTI_PYRAR|IMIDAZOLONEPROPIONASE arsenaticum (strain DSM 13514

Query: 2 KSGVVSTLI 10
KSG V+TL+
Sbjct: 268 KSGTVATLL 276




56|SequenceR|285|276|KVQVECKSGV

>sp|ARGC_ARCFU|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KVQVECKSGV 10
+V +CKSG+
Sbjct: 164 RVVFDCKSGI 173


>sp|PSA_PYRAE|PROTEASOME subunit alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VQVECKSGV 10
V V+CK+GV
Sbjct: 39 VGVKCKAGV 47


>sp|PSA_PYRAB|PROTEASOME subunit alpha|Pyrococcus abyssi (strain GE5 /

Query: 2 VQVECKSGV 10
V V+CK GV
Sbjct: 40 VGVKCKDGV 48




57|SequenceR|290|281|YIGGNKVQVE

>sp|CAS1_METKA|CRISPR-ASSOCIATED endonuclease Cas1|Methanopyrus kandleri (strain AV19 /

Query: 1 YIGGNKV 7
Y+GGN++
Sbjct: 63 YLGGNRI 69


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 1 YIGGNK 6
Y+GGNK
Sbjct: 345 YVGGNK 350


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 1 YIGGNK 6
Y+GGNK
Sbjct: 343 YVGGNK 348


>sp|Y584_METJA|UPF0718 protein MJ0584|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YIGGNKV 7
Y+GGN +
Sbjct: 272 YVGGNSI 278


>sp|PSB2_SACI1|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 IGGNKVQVE 10
I GNK+Q+E
Sbjct: 3 IMGNKLQLE 11


>sp|FENR_SACS2|FERREDOXIN--NADP reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YIGGNKVQVE 10
Y GG+ VQ+E
Sbjct: 277 YAGGDIVQME 286


>sp|PCNA1_SULOH|DNA polymerase sliding clamp 1|Sulfurisphaera ohwakuensis

Query: 3 GGNKVQVE 10
G NKV+VE
Sbjct: 168 GENKVEVE 175




58|SequenceR|295|286|KFVGEYIGGN

>sp|Y444_METMA|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina mazei

Query: 1 KFVGEYIGGN 10
K++ EY+GG+
Sbjct: 63 KYLAEYLGGS 72


>sp|Y3524_METAC|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina

Query: 1 KFVGEYIGGN 10
K++ EY+GG+
Sbjct: 63 KYLAEYLGGS 72


>sp|Y2318_METBF|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina

Query: 1 KFVGEYIGGN 10
K++ EY+GG+
Sbjct: 63 KYLAEYLGGS 72


>sp|KPRS_METAC|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FVGEYIGGN 10
VGEYI G+
Sbjct: 140 LVGEYIAGS 148


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 3 VGEYIGG 9
+GEY+GG
Sbjct: 30 LGEYLGG 36


>sp|TRUD_THESM|PROBABLE tRNA pseudouridine synthase D|Thermococcus sibiricus (strain DSM

Query: 1 KFVGEYIG 8
KF+GEY G
Sbjct: 199 KFLGEYTG 206


>sp|MCRB_METFE|METHYL-COENZYME M reductase subunit beta|Methanothermus fervidus

Query: 5 EYIGGN 10
EY+GGN
Sbjct: 169 EYVGGN 174


>sp|SYDND_ARCFU|ASPARTATE--TRNA(ASP/ASN) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KFVGEYIGG 9
K VGE +GG
Sbjct: 308 KLVGEEMGG 316


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 VGEYIGGN 10
V EY+GG+
Sbjct: 519 VDEYVGGD 526


>sp|ACKA_METTE|ACETATE kinase|Methanosarcina thermophila

Query: 1 KFVGEY 6
KF+GEY
Sbjct: 311 KFIGEY 316


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VGEYIGGN 10
V EY+ GN
Sbjct: 462 VAEYLAGN 469


>sp|RS3A_THEAC|SMALL ribosomal subunit protein eS1|Thermoplasma acidophilum (strain

Query: 2 FVGEYIGGN 10
F+G YIG +
Sbjct: 83 FIGHYIGDD 91


>sp|RS3A_THEVO|SMALL ribosomal subunit protein eS1|Thermoplasma volcanium (strain ATCC

Query: 2 FVGEYIGGN 10
F+G YIG +
Sbjct: 83 FIGHYIGDD 91


>sp|RIBA_ARCFU|GTP cyclohydrolase-2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KFVGEYIGGN 10
KF+ E + GN
Sbjct: 87 KFIRELVSGN 96


>sp|GLMM_THEGJ|PROBABLE phosphoglucosamine mutase|Thermococcus gammatolerans (strain DSM

Query: 1 KFVGEYIGG 9
K VG Y+GG
Sbjct: 28 KAVGTYLGG 36


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 3 VGEYIGG 9
+GEY GG
Sbjct: 315 IGEYHGG 321


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 3 VGEYIGG 9
+GEY GG
Sbjct: 330 IGEYHGG 336


>sp|HTPX1_METAC|PROTEASE HtpX homolog 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FVGEYIGG 9
+G+Y GG
Sbjct: 20 LIGDYFGG 27


>sp|HTPX1_METMA|PROTEASE HtpX homolog 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VGEYIGG 9
+G+Y GG
Sbjct: 21 IGDYFGG 27


>sp|Y1350_METJA|UNCHARACTERIZED protein MJ1350|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FVGEYIGG 9
F+GEY+ G
Sbjct: 148 FLGEYMAG 155


>sp|CHED_NATPD|PROBABLE chemoreceptor glutamine deamidase CheD|Natronomonas pharaonis

Query: 1 KFVGEYIGGN 10
+ VGE +GG+
Sbjct: 132 ELVGEEVGGD 141


>sp|COBS_THEON|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus onnurineus (strain NA1)

Query: 2 FVGEYIGG 9
F G Y+GG
Sbjct: 226 FAGAYLGG 233


>sp|FLPA_NANEQ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Nanoarchaeum equitans (strain

Query: 1 KFVGEYIGGN 10
K G YIG N
Sbjct: 13 KLEGVYIGNN 22


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 3 VGEYIGG 9
+G YIGG
Sbjct: 102 IGMYIGG 108




59|SequenceR|300|291|KPSYTKFVGE

>sp|RS17E_METMJ|SMALL ribosomal subunit protein eS17|Methanoculleus marisnigri (strain

Query: 1 KPSYTKFVGE 10
KPSY K +GE
Sbjct: 4 KPSYIKNLGE 13


>sp|OGT_PYRSN|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus sp. (strain NA2)

Query: 1 KPSYTKFVGE 10
KPSY KF+ E
Sbjct: 158 KPSYKKFLLE 167


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 KPSYTKFVG 9
KP Y K VG
Sbjct: 291 KPPYAKIVG 299


>sp|OGT_PYRHO|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KPSYTKFVGE 10
KPSY KF+ E
Sbjct: 157 KPSYKKFLLE 166


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 1 KPSYTKF 7
KP YTKF
Sbjct: 506 KPEYTKF 512


>sp|RL7A_SULTO|LARGE ribosomal subunit protein eL8|Sulfurisphaera tokodaii (strain

Query: 1 KPSYTKF 7
KPSY KF
Sbjct: 3 KPSYVKF 9


>sp|RL7A_PYRFU|LARGE ribosomal subunit protein eL8|Pyrococcus furiosus (strain ATCC

Query: 1 KPSYTKF 7
KPSY KF
Sbjct: 3 KPSYVKF 9


>sp|RL7A_SULAC|LARGE ribosomal subunit protein eL8|Sulfolobus acidocaldarius (strain

Query: 1 KPSYTKF 7
KPSY KF
Sbjct: 3 KPSYVKF 9


>sp|RL7A_METS5|LARGE ribosomal subunit protein eL8|Metallosphaera sedula (strain

Query: 1 KPSYTKF 7
KPSY KF
Sbjct: 3 KPSYVKF 9


>sp|RL6_METAC|LARGE ribosomal subunit protein uL6|Methanosarcina acetivorans (strain

Query: 1 KPSYTKFVGE 10
KP + K +GE
Sbjct: 116 KPRFAKIIGE 125


>sp|RS3A_METTP|SMALL ribosomal subunit protein eS1|Methanothrix thermoacetophila

Query: 3 SYTKFVG 9
+YTKF+G
Sbjct: 77 AYTKFIG 83


>sp|RL7A_THEON|LARGE ribosomal subunit protein eL8|Thermococcus onnurineus (strain

Query: 1 KPSYTKF 7
KPSY KF
Sbjct: 3 KPSYVKF 9


>sp|RL7A_THEKO|LARGE ribosomal subunit protein eL8|Thermococcus kodakarensis (strain

Query: 1 KPSYTKF 7
KPSY KF
Sbjct: 3 KPSYVKF 9


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 4 YTKFVGE 10
YT F+GE
Sbjct: 763 YTSFIGE 769


>sp|RS17E_METLZ|SMALL ribosomal subunit protein eS17|Methanocorpusculum labreanum

Query: 1 KPSYTKFVG 9
KPSY K +G
Sbjct: 4 KPSYIKSMG 12


>sp|RL7A_THEGJ|LARGE ribosomal subunit protein eL8|Thermococcus gammatolerans

Query: 1 KPSYTKF 7
KPSY KF
Sbjct: 3 KPSYVKF 9


>sp|RS3A_METMJ|SMALL ribosomal subunit protein eS1|Methanoculleus marisnigri (strain

Query: 3 SYTKFVG 9
+YT+FVG
Sbjct: 79 AYTEFVG 85


>sp|RL7A_PYRHO|LARGE ribosomal subunit protein eL8|Pyrococcus horikoshii (strain

Query: 1 KPSYTKF 7
KPSY KF
Sbjct: 3 KPSYVKF 9


>sp|RL7A_PYRAB|LARGE ribosomal subunit protein eL8|Pyrococcus abyssi (strain GE5 /

Query: 1 KPSYTKF 7
KPSY KF
Sbjct: 3 KPSYVKF 9


>sp|DCDA_METTH|DIAMINOPIMELATE decarboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KPSYTKFVG 9
K SY KF G
Sbjct: 301 KESYRKFAG 309


>sp|OGT_PYRFU|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KPSYTKFVGE 10
KP Y KF+ E
Sbjct: 159 KPEYKKFLLE 168


>sp|OGT_PYRAB|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 KPSYTKFVGE 10
KP Y KF+ E
Sbjct: 157 KPEYKKFLLE 166


>sp|RL10E_HALWD|LARGE ribosomal subunit protein uL16|Haloquadratum walsbyi (strain DSM

Query: 1 KPSYTK 6
KPSYT+
Sbjct: 14 KPSYTR 19


>sp|RS3A_METB6|SMALL ribosomal subunit protein eS1|Methanoregula boonei (strain DSM

Query: 3 SYTKFVG 9
+YT+FVG
Sbjct: 79 AYTEFVG 85


>sp|RL10E_HALSA|LARGE ribosomal subunit protein uL16|Halobacterium salinarum (strain

Query: 1 KPSYTK 6
KPSYT+
Sbjct: 14 KPSYTR 19


>sp|RL10E_HALS3|LARGE ribosomal subunit protein uL16|Halobacterium salinarum (strain

Query: 1 KPSYTK 6
KPSYT+
Sbjct: 14 KPSYTR 19


>sp|THII_AERPE|PROBABLE tRNA sulfurtransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KPSYTKFV 8
KP YT +V
Sbjct: 146 KPEYTAYV 153


>sp|RL10E_HALLT|LARGE ribosomal subunit protein uL16|Halorubrum lacusprofundi (strain

Query: 1 KPSYTK 6
KPSYT+
Sbjct: 14 KPSYTR 19


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 3 SYTKFVGE 10
+ TKF+GE
Sbjct: 315 AVTKFIGE 322


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 3 SYTKFVGE 10
+ TKF+GE
Sbjct: 315 AVTKFIGE 322


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 3 SYTKFVGE 10
+ TKF+GE
Sbjct: 315 AVTKFIGE 322


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 3 SYTKFVGE 10
+ TKF+GE
Sbjct: 315 AVTKFIGE 322




60|SequenceR|305|296|LVLDCKPSYT

>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LVLDCKPSY 9
LV DC P+Y
Sbjct: 445 LVADCNPTY 453


>sp|PMDHL_AERPE|PHOSPHOMEVALONATE dehydratase large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 LVLDCKPSYT 10
L+L C P YT
Sbjct: 118 LILTCTPYYT 127


>sp|ASPD_METAC|L-ASPARTATE dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 CKPSY 9
CKPSY
Sbjct: 50 CKPSY 54


>sp|Y061_SULTO|PUTATIVE esterase STK_00610|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VLDCKPSYT 10
+LD KP Y+
Sbjct: 21 ILDVKPGYS 29


>sp|COMB_THEVO|PROBABLE 2-phosphosulfolactate phosphatase|Thermoplasma volcanium (strain

Query: 2 VLDCKPSY 9
+LDC P Y
Sbjct: 196 LLDCVPEY 203


>sp|TRPG_ARCFU|ANTHRANILATE synthase component 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LVLDCKPSY 9
+V+DCK S+
Sbjct: 3 VVVDCKDSF 11


>sp|KAD_METBU|ADENYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 4 DCKPSY 9
DCKP Y
Sbjct: 76 DCKPGY 81


>sp|G3P_METST|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LVLDCKP 7
LV+DC P
Sbjct: 81 LVVDCTP 87


>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LVLDCKP 7
LV+DC P
Sbjct: 82 LVVDCTP 88


>sp|G3P2_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 LVLDCKP 7
LV+DC P
Sbjct: 82 LVVDCTP 88


>sp|G3P1_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 LVLDCKP 7
LV+DC P
Sbjct: 82 LVVDCTP 88


>sp|G3P1_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LVLDCKP 7
LV+DC P
Sbjct: 82 LVVDCTP 88


>sp|QUEC_THEAC|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 DCKPSY 9
DC+P Y
Sbjct: 134 DCRPEY 139


>sp|SYT_THEON|THREONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 LVLDCKPS 8
L+L C PS
Sbjct: 473 LILHCSPS 480


>sp|SYT_THEKO|THREONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LVLDCKPS 8
L+L C PS
Sbjct: 472 LILHCSPS 479


>sp|SYT_THEGJ|THREONINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LVLDCKPS 8
L+L C PS
Sbjct: 472 LILHCSPS 479


>sp|SYT_PYRHO|THREONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LVLDCKPS 8
L+L C PS
Sbjct: 471 LILHCSPS 478


>sp|SYT_PYRFU|THREONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LVLDCKPS 8
L+L C PS
Sbjct: 471 LILHCSPS 478


>sp|SYT_PYRAB|THREONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LVLDCKPS 8
L+L C PS
Sbjct: 471 LILHCSPS 478


>sp|G3P_ARCFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LVLDCKPS 8
+V+DC P+
Sbjct: 82 IVVDCSPN 89


>sp|SCAF_METJA|DUF35 domain-containing scaffold protein|Methanocaldococcus jannaschii

Query: 2 VLDCKP 7
++DCKP
Sbjct: 100 IVDCKP 105


>sp|QUEC_THEVO|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 DCKPSY 9
DC+P Y
Sbjct: 133 DCRPEY 138


>sp|RPIA_PICTO|RIBOSE-5-PHOSPHATE isomerase A|Picrophilus torridus (strain ATCC 700027

Query: 2 VLDCKPSYT 10
++DC SYT
Sbjct: 169 IIDCVFSYT 177


>sp|QUEC_PICTO|7-CYANO-7-DEAZAGUANINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 4 DCKPSY 9
DC+P Y
Sbjct: 132 DCRPEY 137




61|SequenceR|310|301|EHAADLVLDC

>sp|G3P_METBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 3 AADLVLDC 10
AAD+V+DC
Sbjct: 79 AADVVVDC 86


>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 ADLVLDC 10
ADLV+DC
Sbjct: 80 ADLVVDC 86


>sp|G3P1_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 ADLVLDC 10
ADLV+DC
Sbjct: 80 ADLVVDC 86


>sp|G3P1_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina barkeri (strain Fusaro /

Query: 4 ADLVLDC 10
ADLV+DC
Sbjct: 80 ADLVVDC 86


>sp|G3P2_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina barkeri (strain Fusaro /

Query: 4 ADLVLDC 10
ADLV+DC
Sbjct: 80 ADLVVDC 86


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 ADLVLDC 10
AD+V+DC
Sbjct: 79 ADIVVDC 85


>sp|G3P_ARCFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 ADLVLDC 10
AD+V+DC
Sbjct: 80 ADIVVDC 86


>sp|G3P_METFE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermus fervidus

Query: 4 ADLVLDC 10
AD+V+DC
Sbjct: 79 ADIVIDC 85


>sp|G1PDH_PYRAB|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus abyssi (strain GE5 /

Query: 2 HAADLVLD 9
HA DL+LD
Sbjct: 251 HALDLLLD 258


>sp|HIS8_HALVD|HISTIDINOL-PHOSPHATE aminotransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 EHAADLVLDC 10
E ADLVLD
Sbjct: 142 EQTADLVLDA 151


>sp|G3P_METS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 ADLVLDC 10
AD+V+DC
Sbjct: 80 ADVVVDC 86


>sp|G1PDH_THEKO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus kodakarensis (strain ATCC

Query: 2 HAADLVLD 9
HA D++LD
Sbjct: 256 HALDMLLD 263


>sp|G1PDH_PYRHO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HAADLVLD 9
HA D++LD
Sbjct: 251 HALDMLLD 258


>sp|G3P2_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 ADLVLDC 10
AD+++DC
Sbjct: 80 ADVIVDC 86


>sp|THIM_HALWD|HYDROXYETHYLTHIAZOLE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EHAADLVLD 9
EH A LVLD
Sbjct: 96 EHDAGLVLD 104


>sp|G3P_METST|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 DLVLDC 10
DLV+DC
Sbjct: 80 DLVVDC 85




62|SequenceR|315|306|SETSKEHAAD

***** No hits found ******


63|SequenceR|320|311|KPGSSSETSK

***** No hits found ******


64|SequenceR|325|316|MIEERKPGSS

>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 1 MIEERKPG 8
+IE RKPG
Sbjct: 109 LIEARKPG 116


>sp|TAW22_NANEQ|TRNA (guanine(37)-N(1))/4-demethylwyosine(37)-methyltransferase

Query: 1 MIEERKPG 8
+IEE KPG
Sbjct: 207 LIEELKPG 214


>sp|AROC_METS3|CHORISMATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 IEERKPGSS 10
+++RKPG+S
Sbjct: 44 LDKRKPGTS 52


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 1 MIEERKPGS 9
M++ER PG+
Sbjct: 411 MVKERYPGT 419


>sp|Y1157_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MIEERKPG 8
++EE KPG
Sbjct: 284 ILEEEKPG 291


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 MIEERKPGSS 10
+IEE+ PG S
Sbjct: 451 LIEEKSPGLS 460


>sp|AROC_THEAC|CHORISMATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IEERKPGSS 10
+E R+PGSS
Sbjct: 43 MEYRRPGSS 51


>sp|AROC_METAR|CHORISMATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 IEERKPGSS 10
+++RKPG S
Sbjct: 45 LDKRKPGQS 53


>sp|Y2239_ARCFU|UNCHARACTERIZED protein AF_2239|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IEERKPGS 9
I ERKP S
Sbjct: 316 IRERKPSS 323


>sp|HMGCS_CALMQ|HYDROXYMETHYLGLUTARYL-COA synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 MIEERKPGS 9
++EE KPG+
Sbjct: 280 VLEEAKPGA 288


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 1 MIEERKPG 8
+IE +KPG
Sbjct: 109 LIEAKKPG 116


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MIEERKPG 8
+IE +KPG
Sbjct: 112 LIEAKKPG 119


>sp|Y1416_METJA|UNCHARACTERIZED protein MJ1416|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MIEERKPGS 9
++ ERKPG
Sbjct: 411 VVGERKPGD 419


>sp|TTUA_PYRHO|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IEERKPGS 9
+EE++PG+
Sbjct: 238 LEEKRPGT 245




65|SequenceR|330|321|FLISEMIEER

>sp|NURA_SACS2|DNA double-strand break repair nuclease|Saccharolobus solfataricus

Query: 1 FLISEMIEE 9
FL+S++IEE
Sbjct: 184 FLVSKIIEE 192




66|SequenceR|335|326|FDSCKFLISE

>sp|FLAJ_METJA|FLAGELLA accessory protein J|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FDSCKFLI 8
FDSC +LI
Sbjct: 394 FDSCSYLI 401


>sp|TBP_CENSY|TATA-BOX-BINDING protein|Cenarchaeum symbiosum (strain A)

Query: 1 FDSCKFLI 8
DSC FL+
Sbjct: 142 LDSCSFLV 149


>sp|CSG_METSC|CELL surface glycoprotein|Methanothermus sociabilis

Query: 1 FDSCKFLISE 10
F +CK +SE
Sbjct: 280 FKNCKVAVSE 289


>sp|CSG_METFV|CELL surface glycoprotein|Methanothermus fervidus (strain ATCC 43054

Query: 1 FDSCKFLISE 10
F +CK +SE
Sbjct: 280 FKNCKVAVSE 289


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FDSCKFLI 8
D CKF++
Sbjct: 367 LDGCKFVV 374


>sp|FEN_METJA|FLAP endonuclease 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DSCKFLIS 9
++CK+L+S
Sbjct: 133 ENCKYLLS 140




67|SequenceR|340|331|FQVVVFDSCK

>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 FQVVVFD 7
FQV VFD
Sbjct: 150 FQVTVFD 156


>sp|ARSA_METJA|PUTATIVE arsenical pump-driving ATPase|Methanocaldococcus jannaschii (strain

Query: 1 FQVVVFDS 8
F VV+FD+
Sbjct: 152 FDVVIFDT 159


>sp|NUCS_SACI7|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 VVVFDSCK 10
VV+F +CK
Sbjct: 26 VVIFATCK 33


>sp|NUCS_SACI4|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.14.25 /

Query: 3 VVVFDSCK 10
VV+F +CK
Sbjct: 26 VVIFATCK 33


>sp|NUCS_SACI3|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 VVVFDSCK 10
VV+F +CK
Sbjct: 26 VVIFATCK 33


>sp|NUCS_SACI2|ENDONUCLEASE NucS|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 VVVFDSCK 10
VV+F +CK
Sbjct: 26 VVIFATCK 33


>sp|NUCS_SACI1|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 VVVFDSCK 10
VV+F +CK
Sbjct: 26 VVIFATCK 33




68|SequenceR|345|336|SDMDKFQVVV

>sp|FTRL_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter

Query: 2 DMDKFQV 8
DM+KFQV
Sbjct: 81 DMEKFQV 87


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 1 SDMDKFQVV 9
SD D F+VV
Sbjct: 203 SDADAFEVV 211


>sp|GLCD2_SACS2|GLUCOSE 1-dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DMDKFQVVV 10
D+DKF +++
Sbjct: 245 DVDKFDLII 253




69|SequenceR|350|341|RKAYSSDMDK

>sp|HIS1_THEKO|ATP phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 RKAYSSDMD 9
RK Y DMD
Sbjct: 94 RKRYPEDMD 102


>sp|NCPP_ARCFU|PROBABLE inosine/xanthosine triphosphatase|Archaeoglobus fulgidus (strain

Query: 1 RKAYSSDMD 9
+KAYS D D
Sbjct: 52 KKAYSPDFD 60


>sp|AROE_NITMS|SHIKIMATE dehydrogenase (NADP(+))|Nitrosopumilus maritimus (strain SCM1)

Query: 2 KAYSSDMD 9
K Y++DMD
Sbjct: 97 KGYNTDMD 104


>sp|AGOG_METMP|N-GLYCOSYLASE/DNA lyase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KAYSSDMDK 10
K Y SDM+K
Sbjct: 129 KTYYSDMEK 137


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KAYSSDMDK 10
K YS D+DK
Sbjct: 92 KKYSKDIDK 100




70|SequenceR|355|346|DTFADRKAYS

>sp|RIFK_THEKO|RIBOFLAVIN kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TFADRKAY 9
TF D KAY
Sbjct: 154 TFGDVKAY 161


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 3 FADRKAYS 10
F DR AYS
Sbjct: 148 FLDRMAYS 155


>sp|PYRDB_METAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina acetivorans

Query: 1 DTFADRKAYS 10
+ F +RK YS
Sbjct: 289 EAFLERKGYS 298


>sp|HEM2_METJA|DELTA-AMINOLEVULINIC acid dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FADRKAY 9
F DRK+Y
Sbjct: 223 FGDRKSY 229




71|SequenceR|360|351|ASIASDTFAD

***** No hits found ******


72|SequenceR|365|356|EGNVKASIAS

***** No hits found ******


73|SequenceR|370|361|DKEKHEGNVK

>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 1 DKEKHEG 7
DKE HEG
Sbjct: 54 DKEGHEG 60


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKEKHEGNVK 10
+KEK E N+K
Sbjct: 147 EKEKKETNIK 156


>sp|CCA_NANEQ|CCA-ADDING enzyme|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DKEKHEGNVK 10
D EKH N+K
Sbjct: 198 DIEKHYSNIK 207


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 KEKHEGNVK 10
+E H+GNV+
Sbjct: 155 EEPHDGNVE 163


>sp|NSUN6_PYRHO|TRNA (cytosine(72)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 3 EKHEGNVK 10
E++EGNVK
Sbjct: 332 EENEGNVK 339




74|SequenceR|375|366|DWPELDKEKH

>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DWPELDKEKH 10
DWPE+D + H
Sbjct: 798 DWPEVDADLH 807


>sp|SYS2_META3|TYPE-2 serine--tRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DWPELDKEK 9
DWPEL K+K
Sbjct: 498 DWPELIKDK 506


>sp|PYRB_PYRFU|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus furiosus (strain

Query: 3 PELDKEKH 10
PE+DK KH
Sbjct: 276 PEVDKTKH 283


>sp|PYRB_THEKO|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus kodakarensis

Query: 3 PELDKEKH 10
PE+DK KH
Sbjct: 276 PEVDKTKH 283


>sp|PYRB_PYRHO|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus horikoshii

Query: 3 PELDKEKH 10
PE+DK KH
Sbjct: 276 PEVDKTKH 283


>sp|RL30_PICTO|LARGE ribosomal subunit protein uL30|Picrophilus torridus (strain ATCC

Query: 2 WPELDKE 8
W ELDKE
Sbjct: 54 WGELDKE 60


>sp|PYRB_THEGJ|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus gammatolerans

Query: 3 PELDKEKH 10
PE+DK +H
Sbjct: 276 PEVDKSEH 283


>sp|RL3_METST|LARGE ribosomal subunit protein uL3|Methanosphaera stadtmanae (strain

Query: 2 WPELDK 7
WPELD+
Sbjct: 30 WPELDE 35


>sp|COFG_METTH|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 WPELDKEK 9
WPE+D+ K
Sbjct: 276 WPEIDELK 283


>sp|COFG_METMJ|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 WPELDK 7
WP+LD+
Sbjct: 276 WPQLDE 281


>sp|CISY_SACS2|CITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WPELDKEK 9
W E DKEK
Sbjct: 112 WKENDKEK 119


>sp|RSMA_METMA|PROBABLE ribosomal RNA small subunit|Methanosarcina mazei (strain ATCC

Query: 1 DWPELDK 7
D+PE DK
Sbjct: 97 DFPEFDK 103


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 PELDKEK 9
PELD+EK
Sbjct: 261 PELDREK 267


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 DWPELDKEK 9
+WPEL +EK
Sbjct: 60 NWPELLEEK 68


>sp|RSMA_METAC|PROBABLE ribosomal RNA small subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 DWPELDK 7
D+PE DK
Sbjct: 97 DFPEFDK 103


>sp|PYRB_METAR|ASPARTATE carbamoyltransferase catalytic subunit|Methanocella arvoryzae

Query: 3 PELDKEKH 10
PE+D KH
Sbjct: 275 PEVDATKH 282


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 DWPELDKEKH 10
D E+DKE H
Sbjct: 1079 DPTEIDKESH 1088


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 WPELD 6
WP+LD
Sbjct: 233 WPDLD 237


>sp|COFH_METHJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanospirillum hungatei JF-1 (strain

Query: 1 DWPELDKEKH 10
DW + KE H
Sbjct: 201 DWVRIIKESH 210


>sp|HIS8_METVS|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 WPELDKEK 9
W + DKEK
Sbjct: 138 WAKFDKEK 145


>sp|COFG_METTP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 WPELDK 7
WPE+D+
Sbjct: 279 WPEIDE 284


>sp|IDI2_METTH|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothermobacter thermautotrophicus (strain

Query: 3 PELDKEK 9
PE++KEK
Sbjct: 37 PEINKEK 43


>sp|Y1182_METJA|UNCHARACTERIZED protein MJ1182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WPELDKEK 9
+ ELDKEK
Sbjct: 324 FAELDKEK 331


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 DWPELD 6
DWPE+D
Sbjct: 822 DWPEVD 827


>sp|AROA_METJA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocaldococcus jannaschii (strain

Query: 4 ELDKEK 9
ELDKEK
Sbjct: 65 ELDKEK 70


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 DWPELDKEKH 10
D E+DKE H
Sbjct: 925 DPKEIDKESH 934


>sp|Y1308_METJA|UNCHARACTERIZED protein MJ1308|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 ELDKEKH 10
+LDKE+H
Sbjct: 13 KLDKEEH 19


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 DWPELDKEKH 10
D E+DKE H
Sbjct: 1077 DPSEVDKESH 1086


>sp|DYR1_HALMA|DIHYDROFOLATE reductase 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 DWPELDKEKH 10
+W EL +E H
Sbjct: 157 EWTELSREPH 166


>sp|PSA_THEGJ|PROTEASOME subunit alpha|Thermococcus gammatolerans (strain DSM 15229

Query: 2 WPELDKEK 9
W +LDKE+
Sbjct: 222 WKKLDKEE 229


>sp|SAT_NITMS|SULFATE adenylyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DWPELD 6
D+PELD
Sbjct: 304 DYPELD 309


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 DWPELDKEKH 10
D E+DKE H
Sbjct: 933 DPKEVDKEAH 942


>sp|SYS2_METVS|TYPE-2 serine--tRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DWPELDKEK 9
DWP++ K+K
Sbjct: 492 DWPDMIKDK 500


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 1 DWPELD 6
DW ELD
Sbjct: 597 DWSELD 602


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 DWPELDKEKH 10
D E+DKE H
Sbjct: 932 DPKEVDKEAH 941


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 DWPELDKEKH 10
D E+DKE H
Sbjct: 939 DPKEVDKEAH 948


>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 1 DWPELDKEK 9
D+PELD K
Sbjct: 278 DFPELDDPK 286




75|SequenceR|380|371|TLEGADWPEL

>sp|RLME_METB6|RIBOSOMAL RNA large subunit methyltransferase|Methanoregula boonei (strain

Query: 1 TLEGADWPEL 10
+ +GAD+PEL
Sbjct: 149 SFQGADFPEL 158


>sp|NADM_METM7|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 LEGADWPEL 10
LEG+DW L
Sbjct: 134 LEGSDWEHL 142


>sp|NADM_METTP|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LEGADWPEL 10
+EG DW +L
Sbjct: 135 IEGGDWRQL 143


>sp|DHQS_METM7|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 LEGADW 7
LEG+DW
Sbjct: 109 LEGSDW 114


>sp|DHQS_METMP|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LEGADW 7
LEG+DW
Sbjct: 109 LEGSDW 114


>sp|DHQS_METM6|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 2 LEGADW 7
LEG+DW
Sbjct: 109 LEGSDW 114


>sp|DHQS_METM5|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 LEGADW 7
LEG+DW
Sbjct: 109 LEGSDW 114


>sp|DHQS_METVS|3-DEHYDROQUINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LEGADW 7
LEG DW
Sbjct: 109 LEGKDW 114


>sp|NADM_ARCFU|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LEGADW 7
LEG DW
Sbjct: 140 LEGEDW 145


>sp|SYS2_META3|TYPE-2 serine--tRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 6 DWPEL 10
DWPEL
Sbjct: 498 DWPEL 502


>sp|AAT_SACS2|ASPARTATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TLEGADW 7
TLE +DW
Sbjct: 224 TLEDSDW 230


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TLEGADWPEL 10
TLE +W E+
Sbjct: 268 TLEDTNWEEM 277


>sp|ARCH_SACI2|PROTEIN archease|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 TLEGADWPE 9
TLEG W E
Sbjct: 93 TLEGKAWGE 101


>sp|ARCH_SACI1|PROTEIN archease|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 TLEGADWPE 9
TLEG W E
Sbjct: 93 TLEGKAWGE 101


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 2 LEGADWPE 9
L GAD PE
Sbjct: 10 LRGADMPE 17


>sp|ARCH_SULTO|PROTEIN archease|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TLEGADWPE 9
TLEG W E
Sbjct: 93 TLEGKAWGE 101


>sp|ARCH_SACS2|PROTEIN archease|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TLEGADWPE 9
TLEG W E
Sbjct: 93 TLEGKAWGE 101


>sp|ARCH_SACI7|PROTEIN archease|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 TLEGADWPE 9
TLEG W E
Sbjct: 93 TLEGKAWGE 101


>sp|Y1566_ARCFU|UNCHARACTERIZED protein AF_1566|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TLEGADWPEL 10
T+ AD+PEL
Sbjct: 184 TISNADFPEL 193


>sp|ARCH_SACI6|PROTEIN archease|Saccharolobus islandicus (strain M.16.4 /

Query: 1 TLEGADWPE 9
TLEG W E
Sbjct: 93 TLEGKAWGE 101


>sp|ARCH_SACI4|PROTEIN archease|Saccharolobus islandicus (strain M.14.25 /

Query: 1 TLEGADWPE 9
TLEG W E
Sbjct: 93 TLEGKAWGE 101


>sp|ARCH_SACI3|PROTEIN archease|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 TLEGADWPE 9
TLEG W E
Sbjct: 93 TLEGKAWGE 101


>sp|HMGCS_METAR|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocella arvoryzae (strain DSM 22066

Query: 3 EGADWP 8
EGAD+P
Sbjct: 189 EGADYP 194


>sp|DHQS_META3|3-DEHYDROQUINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LEGADW 7
LEG DW
Sbjct: 109 LEGKDW 114


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 2 LEGADWPE 9
LEG DW E
Sbjct: 263 LEGWDWLE 270


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 4 GADWPE 9
GAD+PE
Sbjct: 744 GADYPE 749


>sp|G1PDH_METHJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LEGADWPEL 10
L G DW E+
Sbjct: 291 LHGGDWREI 299


>sp|RL30_CENSY|LARGE ribosomal subunit protein uL30|Cenarchaeum symbiosum (strain A)

Query: 2 LEGADWP 8
LEG D+P
Sbjct: 86 LEGTDYP 92


>sp|G1PDH_NITMS|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Nitrosopumilus maritimus (strain SCM1)

Query: 2 LEGADWPEL 10
L+G DW ++
Sbjct: 285 LQGQDWKKI 293


>sp|MTBA_METBA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina barkeri

Query: 4 GADWPE 9
GA WPE
Sbjct: 40 GAYWPE 45


>sp|MTBA_METMA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GADWPE 9
GA WPE
Sbjct: 40 GAFWPE 45


>sp|MTBA_METAC|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina acetivorans (strain ATCC

Query: 4 GADWPE 9
GA WPE
Sbjct: 40 GAYWPE 45


>sp|DHQS_METJA|3-DEHYDROQUINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LEGADW 7
LEG DW
Sbjct: 109 LEGRDW 114


>sp|HPS_METBF|3-HEXULOSE-6-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 GADWPEL 10
GADW E+
Sbjct: 15 GADWIEI 21


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 6 DWPEL 10
DWPEL
Sbjct: 492 DWPEL 496


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TLEGADWPEL 10
T+ DWPE+
Sbjct: 793 TVHMCDWPEV 802


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 6 DWPEL 10
DWPEL
Sbjct: 492 DWPEL 496


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 6 DWPEL 10
DWPEL
Sbjct: 492 DWPEL 496


>sp|AATA_HALMA|A-TYPE ATP synthase subunit A|Haloarcula marismortui (strain ATCC 43049

Query: 5 ADWPE 9
ADWPE
Sbjct: 455 ADWPE 459


>sp|HIS2_IGNH4|PHOSPHORIBOSYL-ATP pyrophosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LEGADWPEL 10
L G DW E+
Sbjct: 76 LRGVDWAEV 84


>sp|G1PDH_METST|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosphaera stadtmanae (strain ATCC

Query: 2 LEGADW 7
L+G DW
Sbjct: 278 LQGGDW 283


>sp|SYS2_METVS|TYPE-2 serine--tRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LEGADWPEL 10
E +DWP++
Sbjct: 488 FEYSDWPDM 496


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 EGADWPEL 10
EG DW E+
Sbjct: 81 EGRDWREI 88


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 3 EGADWPE 9
+GA+WP+
Sbjct: 391 QGAEWPD 397


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TLEGADWPE 9
TL+G D PE
Sbjct: 113 TLKGMDTPE 121


>sp|COFG_METJA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 ADWPEL 10
A+WPE+
Sbjct: 307 AEWPEI 312


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 4 GADWPEL 10
GADW +L
Sbjct: 444 GADWTQL 450


>sp|MTAA_METBF|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri (strain Fusaro /

Query: 4 GADWPE 9
GA WPE
Sbjct: 40 GAAWPE 45


>sp|MTAA_METBA|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri

Query: 4 GADWPE 9
GA WPE
Sbjct: 40 GAAWPE 45




76|SequenceR|385|376|LEENATLEGA

>sp|BGAL_HALLT|BETA-GALACTOSIDASE Bga|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 EENATLEGA 10
EE ATL+GA
Sbjct: 385 EEFATLDGA 393


>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LEENATLEG 9
LEEN+ L+G
Sbjct: 27 LEENSKLKG 35


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LEENATLEGA 10
LEE +EGA
Sbjct: 171 LEEGGRMEGA 180




77|SequenceR|390|381|NELAELEENA

>sp|GGGPS_STAMF|GERANYLGERANYLGLYCERYL phosphate synthase|Staphylothermus marinus (strain ATCC 43588

Query: 1 NELAELEENA 10
N+L +LEE A
Sbjct: 29 NDLGKLEETA 38


>sp|PIMT_THEON|PROTEIN-L-ISOASPARTATE O-methyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 ELAELEE 8
ELAELEE
Sbjct: 74 ELAELEE 80


>sp|MCH_METBF|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ELAELEE 8
ELAELEE
Sbjct: 244 ELAELEE 250


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 1 NELAELEENA 10
NEL L+E+A
Sbjct: 113 NELRRLDEHA 122


>sp|RNZ_PICTO|RIBONUCLEASE Z|Picrophilus torridus (strain ATCC 700027

Query: 2 ELAELEEN 9
++AE+EEN
Sbjct: 117 KIAEMEEN 124


>sp|ILVD_SACI6|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NELAELEENA 10
NEL E+E+ A
Sbjct: 179 NELYEIEKRA 188


>sp|ILVD_SACI4|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NELAELEENA 10
NEL E+E+ A
Sbjct: 179 NELYEIEKRA 188


>sp|ILVD_SACI3|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 NELAELEENA 10
NEL E+E+ A
Sbjct: 179 NELYEIEKRA 188




78|SequenceR|395|386|GNSVDNELAE

>sp|TRPD_METBU|ANTHRANILATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 GNSVDNE 7
GN VDNE
Sbjct: 334 GNKVDNE 340


>sp|Y1631_PYRHO|PUTATIVE uncharacterized protein PH1631|Pyrococcus horikoshii (strain ATCC

Query: 1 GNSVDNEL 8
GNS DN L
Sbjct: 34 GNSADNVL 41


>sp|TFE_PYRFU|TRANSCRIPTION factor E|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GNSVDNELAE 10
G + D ELAE
Sbjct: 33 GEATDEELAE 42


>sp|TFE_PYRHO|TRANSCRIPTION factor E|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GNSVDNELAE 10
G + D ELAE
Sbjct: 31 GEATDEELAE 40


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNSVDNELA 9
GNSVD++ A
Sbjct: 293 GNSVDSKYA 301


>sp|TFE_PYRAB|TRANSCRIPTION factor E|Pyrococcus abyssi (strain GE5 /

Query: 1 GNSVDNELAE 10
G + D ELAE
Sbjct: 31 GEATDEELAE 40




79|SequenceR|400|391|DNPDWGNSVD

>sp|PRIS_METPE|DNA primase small subunit PriS|Methanosphaerula palustris (strain ATCC

Query: 1 DNPDW 5
DNPDW
Sbjct: 266 DNPDW 270


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 2 NPDWG 6
NPDWG
Sbjct: 585 NPDWG 589


>sp|TRUB_PYRFU|PROBABLE tRNA pseudouridine synthase B|Pyrococcus furiosus (strain ATCC

Query: 2 NPDWG 6
NPDWG
Sbjct: 28 NPDWG 32


>sp|IF2P_THEAC|PROBABLE translation initiation factor IF-2|Thermoplasma acidophilum (strain

Query: 1 DNPDWGNSV 9
DNP WG V
Sbjct: 581 DNPFWGTRV 589


>sp|Y233_METJA|UNCHARACTERIZED protein MJ0233|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PDWGNSVD 10
PDW N D
Sbjct: 98 PDWNNITD 105


>sp|Y1654_ARCFU|UNCHARACTERIZED protein AF_1654|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DNPDWGN 7
DNP W N
Sbjct: 63 DNPIWAN 69


>sp|RNP3_THEKO|RIBONUCLEASE P protein component 3|Thermococcus kodakarensis (strain ATCC

Query: 1 DNPDWGN 7
D PDWG+
Sbjct: 44 DPPDWGS 50


>sp|TRPF_THEKO|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PDWGNSVD 10
P+W N+V+
Sbjct: 64 PEWANAVE 71


>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain Fusaro

Query: 1 DNPDWGNSV 9
+NP WG V
Sbjct: 93 NNPSWGAEV 101


>sp|IF2P_METAR|PROBABLE translation initiation factor IF-2|Methanocella arvoryzae (strain

Query: 1 DNPDWG 6
DNP WG
Sbjct: 588 DNPFWG 593


>sp|IF2P_ARCFU|PROBABLE translation initiation factor IF-2|Archaeoglobus fulgidus (strain

Query: 1 DNPDWG 6
DNP WG
Sbjct: 589 DNPFWG 594


>sp|KDPA_THEVO|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Thermoplasma volcanium (strain

Query: 1 DNPDW 5
+NPDW
Sbjct: 266 ENPDW 270


>sp|KDPA_THEAC|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Thermoplasma acidophilum (strain

Query: 1 DNPDW 5
+NPDW
Sbjct: 266 ENPDW 270


>sp|IF2P_THEVO|PROBABLE translation initiation factor IF-2|Thermoplasma volcanium (strain

Query: 1 DNPDWGNSV 9
+NP WG V
Sbjct: 581 ENPFWGTKV 589


>sp|TRUB_PYRNV|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum neutrophilum (strain

Query: 2 NPDWG 6
NP+WG
Sbjct: 17 NPEWG 21


>sp|TRUB_PYRIL|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum islandicum (strain DSM

Query: 2 NPDWG 6
NP+WG
Sbjct: 17 NPEWG 21


>sp|TRUB_PYRAR|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum arsenaticum (strain DSM

Query: 2 NPDWG 6
NP+WG
Sbjct: 17 NPEWG 21


>sp|ARGJ_METKA|GLUTAMATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 DNPDWG 6
+NP+WG
Sbjct: 296 ENPNWG 301


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 1 DNPDWGNSV 9
DN WG+++
Sbjct: 579 DNATWGSAI 587


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DNPDWGNSV 9
D+PD+G ++
Sbjct: 526 DDPDYGTAL 534


>sp|G6PI_PYRHO|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DNPDWGN 7
DNP W N
Sbjct: 183 DNPRWKN 189


>sp|AAT_SULAC|ASPARTATE aminotransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DNPDWGN 7
++PDW N
Sbjct: 225 EDPDWKN 231


>sp|DHYS1_ARCFU|PROBABLE deoxyhypusine synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DNPDWG 6
D+P WG
Sbjct: 249 DSPQWG 254


>sp|PRIS_METTP|DNA primase small subunit PriS|Methanothrix thermoacetophila (strain

Query: 1 DNPDWGNSVD 10
D P WG ++
Sbjct: 209 DAPGWGGRIN 218


>sp|TRUB_PYRCJ|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum calidifontis (strain

Query: 2 NPDWG 6
NP WG
Sbjct: 17 NPQWG 21


>sp|TRUB_PYRAE|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum aerophilum (strain ATCC

Query: 2 NPDWG 6
NP WG
Sbjct: 17 NPQWG 21


>sp|RS19E_METTH|SMALL ribosomal subunit protein eS19|Methanothermobacter

Query: 1 DNPDW 5
+NPDW
Sbjct: 46 ENPDW 50


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NPDWGNSV 9
NPDW V
Sbjct: 460 NPDWKAKV 467


>sp|HISX_METKA|HISTIDINOL dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 NPDW 5
NPDW
Sbjct: 249 NPDW 252


>sp|DHYS2_METMA|PROBABLE deoxyhypusine synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DNPDWG 6
D+P WG
Sbjct: 272 DSPHWG 277


>sp|NASD_HALMT|ASSIMILATORY ferredoxin-dependent nitrite reductase|Haloferax mediterranei

Query: 1 DNPDWGN 7
DNP++GN
Sbjct: 92 DNPEFGN 98


>sp|ACDD_METJA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanocaldococcus

Query: 1 DNPDWG 6
+NP+WG
Sbjct: 337 NNPEWG 342


>sp|DHYS2_METAC|PROBABLE deoxyhypusine synthase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 DNPDWG 6
D+P WG
Sbjct: 272 DSPHWG 277


>sp|HPCAL_NITMS|3-HYDROXYPROPIONATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DNPDWGNSVD 10
+N D+ NS+D
Sbjct: 201 ENADYINSID 210


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 3 PDWGNSV 9
PDWG ++
Sbjct: 356 PDWGTNI 362


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 1 DNPDWG 6
++PDWG
Sbjct: 174 ESPDWG 179


>sp|FTSZ1_HALVD|CELL division protein FtsZ 1|Haloferax volcanii (strain ATCC 29605

Query: 5 WGNSVD 10
WG SVD
Sbjct: 331 WGTSVD 336




80|SequenceR|405|396|NYRFMDNPDW

>sp|ALF1_THETK|FRUCTOSE-BISPHOSPHATE aldolase class 1|Thermoproteus tenax (strain ATCC 35583

Query: 4 FMDNPD 9
FMDNPD
Sbjct: 34 FMDNPD 39


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NYRFMDNP 8
+Y+F+DNP
Sbjct: 47 DYQFIDNP 54


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 NYRFMDNP 8
+Y+F+DNP
Sbjct: 47 DYQFIDNP 54


>sp|GATB_METS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 1 NYRFMDNPD 9
+YRF+ +PD
Sbjct: 244 DYRFIPDPD 252


>sp|RS8E_NANEQ|SMALL ribosomal subunit protein eS8|Nanoarchaeum equitans (strain

Query: 3 RFMDNP 8
RF+DNP
Sbjct: 80 RFLDNP 85


>sp|EF2_HALSA|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 RFMDNPD 9
R MDNP+
Sbjct: 13 RLMDNPE 19


>sp|EF2_HALS3|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 29341

Query: 3 RFMDNPD 9
R MDNP+
Sbjct: 13 RLMDNPE 19


>sp|RS5_AERPE|SMALL ribosomal subunit protein uS5|Aeropyrum pernix (strain ATCC 700893

Query: 2 YRFMDNPDW 10
YRF+ DW
Sbjct: 203 YRFVTPADW 211


>sp|ADH_SULAC|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 RFMDNPDW 10
++ DNP W
Sbjct: 108 QYCDNPKW 115


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 NYRFMDNP 8
+Y F+DNP
Sbjct: 47 DYSFIDNP 54


>sp|GATB_METTH|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanothermobacter thermautotrophicus

Query: 1 NYRFMDNPD 9
+YR++ +PD
Sbjct: 244 DYRYIPDPD 252


>sp|GATB_METMP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain DSM

Query: 1 NYRFMDNPD 9
+YR++ +PD
Sbjct: 255 DYRYIPDPD 263


>sp|GATB_METM7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C7 /

Query: 1 NYRFMDNPD 9
+YR++ +PD
Sbjct: 255 DYRYIPDPD 263


>sp|GATB_METM6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C6 /

Query: 1 NYRFMDNPD 9
+YR++ +PD
Sbjct: 255 DYRYIPDPD 263


>sp|GATB_METM5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C5 /

Query: 1 NYRFMDNPD 9
+YR++ +PD
Sbjct: 255 DYRYIPDPD 263


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 1 NYRFMDNPD 9
+YR++ +PD
Sbjct: 258 DYRYIPDPD 266


>sp|ACDD_METJA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanocaldococcus

Query: 4 FMDNPDW 10
+M+NP+W
Sbjct: 335 WMNNPEW 341


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 1 NYRFMDNPD 9
+YR++ +PD
Sbjct: 255 DYRYIPDPD 263


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 YRFMDNPDW 10
+RF NPD+
Sbjct: 108 FRFAPNPDF 116


>sp|RS5_SULAC|SMALL ribosomal subunit protein uS5|Sulfolobus acidocaldarius (strain

Query: 2 YRFMDNPDW 10
YRF+ DW
Sbjct: 202 YRFVTPVDW 210


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 1 NYRFMDNPD 9
+YR++ +PD
Sbjct: 244 DYRYIPDPD 252


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 YRFMDNP 8
Y F+DNP
Sbjct: 47 YDFIDNP 53


>sp|GPI_THEON|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus onnurineus (strain NA1)

Query: 3 RFMDNPDW 10
+ +DNP W
Sbjct: 180 KVVDNPKW 187


>sp|GPI_THEGJ|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 RFMDNPDW 10
+ +DNP W
Sbjct: 180 KIVDNPRW 187


>sp|UPPS_METJA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanocaldococcus

Query: 2 YRFMDN 7
YRF+DN
Sbjct: 23 YRFLDN 28


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 NYRFMDNPD 9
+YR++ +PD
Sbjct: 248 DYRYIPDPD 256


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NYRFMDNPDW 10
N F DNP++
Sbjct: 23 NVFFRDNPEY 32


>sp|G6PI_PYRFU|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RFMDNPDW 10
+ +DNP W
Sbjct: 180 KVVDNPRW 187


>sp|GPI_THEKO|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 RFMDNPDW 10
+ +DNP W
Sbjct: 180 KVVDNPRW 187


>sp|G6PI_PYRHO|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RFMDNPDW 10
+ +DNP W
Sbjct: 180 KVVDNPRW 187


>sp|G6PI_PYRAB|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 3 RFMDNPDW 10
+ +DNP W
Sbjct: 180 KVVDNPRW 187


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 3 RFMDNPD 9
RF++NP+
Sbjct: 374 RFLENPE 380




81|SequenceR|410|401|GYNEENYRFM

>sp|RIBL_PICTO|FAD synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 YNEENYRFM 10
+NEE RFM
Sbjct: 49 FNEEQRRFM 57


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 GYNEENYRF 9
GY+EEN R+
Sbjct: 305 GYDEENDRY 313


>sp|HMGCS_METVS|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GYNEENYRF 9
G+NE YR+
Sbjct: 253 GFNENQYRY 261


>sp|METK_AERPE|S-ADENOSYLMETHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 YNEENYRFM 10
Y EN+RF+
Sbjct: 119 YIRENFRFL 127


>sp|RS4_SULTO|SMALL ribosomal subunit protein uS4|Sulfurisphaera tokodaii (strain DSM

Query: 1 GYNEENY 7
G NEENY
Sbjct: 95 GLNEENY 101


>sp|PDAD2_METMA|PYRUVOYL-DEPENDENT arginine decarboxylase 2|Methanosarcina mazei (strain ATCC

Query: 3 NEENYRFM 10
NEENY ++
Sbjct: 92 NEENYGYI 99


>sp|Y2132_NATPD|UPF0173 metal-dependent hydrolase NP_2132A|Natronomonas pharaonis (strain

Query: 1 GYNEENYRF 9
GY E+N+ F
Sbjct: 73 GYAEDNFGF 81


>sp|NADK_SACS2|NAD kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YNEENYRFM 10
YNEE Y +
Sbjct: 89 YNEEEYMLL 97


>sp|COBD_METVS|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus vannielii (strain

Query: 1 GYNEENYRF 9
GY E YR+
Sbjct: 188 GYKNEKYRY 196


>sp|Y640_METJA|UNCHARACTERIZED protein MJ0640|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YNEENYRF 9
+N+E+Y F
Sbjct: 31 FNDEDYEF 38


>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 1 GYNEENYRF 9
GYN +N+ F
Sbjct: 244 GYNSDNFDF 252


>sp|EF1A_META3|ELONGATION factor 1-alpha|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 YNEENYRFM 10
Y+EE Y+ M
Sbjct: 156 YSEEEYKAM 164


>sp|COBD_THEKO|PROBABLE cobalamin biosynthesis protein CobD|Thermococcus kodakarensis

Query: 1 GYNEENYRF 9
GY E Y F
Sbjct: 176 GYRNERYEF 184


>sp|CAPPA_METS5|PHOSPHOENOLPYRUVATE carboxylase|Metallosphaera sedula (strain ATCC 51363

Query: 4 EENYRFM 10
EENY+F+
Sbjct: 412 EENYKFL 418


>sp|HIS8_METMP|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GYNEENYRFM 10
G +EEN RF+
Sbjct: 354 GTSEENERFL 363


>sp|SYDND_METHJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GYNEENYRF 9
G N EN+ F
Sbjct: 375 GLNPENFEF 383


>sp|Y779_METS3|UPF0173 metal-dependent hydrolase Msm_0779|Methanobrevibacter smithii

Query: 2 YNEENYR 8
YN ENY+
Sbjct: 232 YNPENYQ 238


>sp|SECD_METP4|PROTEIN-EXPORT membrane protein SecD|Methanolacinia petrolearia (strain DSM 11571

Query: 1 GYNEENY 7
GY EE Y
Sbjct: 288 GYGEEGY 294


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 GYNEENYRF 9
GY+EE+ R+
Sbjct: 305 GYDEESGRY 313


>sp|COBD_PYRAB|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus abyssi (strain GE5 /

Query: 1 GYNEENYRF 9
GY +E Y +
Sbjct: 175 GYRDERYEY 183




82|SequenceR|415|406|YTSVVGYNEE

>sp|ATGT_METHJ|TRNA-GUANINE(15) transglycosylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 YTSVVGYNEE 10
Y +++GYNEE
Sbjct: 342 YRTLLGYNEE 351


>sp|TFE_CALMQ|TRANSCRIPTION factor E|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 TSVVGYN 8
TS+VGYN
Sbjct: 49 TSIVGYN 55


>sp|NUCS_METKA|ENDONUCLEASE NucS|Methanopyrus kandleri (strain AV19 /

Query: 4 VVGYNEE 10
VVGY+EE
Sbjct: 166 VVGYDEE 172


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YTSVVGYNEE 10
+ +V+GYN+E
Sbjct: 158 HANVLGYNDE 167


>sp|NAH1_METJA|NA(+)/H(+) antiporter 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YTSVVGY 7
YTS VGY
Sbjct: 116 YTSPVGY 122


>sp|SYFB_THEAC|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YTSVVGYN 8
Y+S++GY+
Sbjct: 26 YSSIIGYS 33


>sp|CARA_PYRAE|CARBAMOYL phosphate synthase small chain|Pyrobaculum aerophilum (strain

Query: 2 TSVVGY 7
TSVVGY
Sbjct: 26 TSVVGY 31




83|SequenceR|420|411|SLSSDYTSVV

***** No hits found ******


84|SequenceR|425|416|PVTYSSLSSD

>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 2 VTYSSLSSD 10
+TYSSL S+
Sbjct: 293 ITYSSLKSN 301


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 2 VTYSSLSSD 10
+TYSSL S+
Sbjct: 287 ITYSSLKSN 295


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 PVTYSS 6
PVTYSS
Sbjct: 7552 PVTYSS 7557




85|SequenceR|430|421|NDRELPVTYS

>sp|MRE11_THEVO|DNA double-strand break repair protein|Thermoplasma volcanium (strain

Query: 1 NDRELPVTY 9
NDR++PV Y
Sbjct: 73 NDRQIPVFY 81


>sp|Y1069_METJA|UNCHARACTERIZED glycosyltransferase MJ1069|Methanocaldococcus jannaschii (strain

Query: 1 NDRELPVTY 9
ND+++P+ Y
Sbjct: 180 NDKDIPIIY 188


>sp|AHBA_METBF|SIROHEME decarboxylase alpha subunit|Methanosarcina barkeri (strain Fusaro

Query: 1 NDRELPV 7
NDRE+PV
Sbjct: 25 NDREVPV 31


>sp|CDPAS_PYRAE|CDP-ARCHAEOL synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RELPVTY 9
RE+PV Y
Sbjct: 129 REIPVVY 135


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DRELPVTY 9
+RE+PV Y
Sbjct: 143 EREIPVAY 150


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 4 ELPVTY 9
ELPVTY
Sbjct: 1317 ELPVTY 1322


>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NDRELPV 7
N+RE+PV
Sbjct: 257 NEREIPV 263


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DRELPVTYS 10
+RELP+ Y+
Sbjct: 265 ERELPLLYA 273


>sp|RS5_SACS2|SMALL ribosomal subunit protein uS5|Saccharolobus solfataricus (strain

Query: 2 DRELPVT 8
DR LP+T
Sbjct: 36 DRNLPIT 42


>sp|RS5_SACI1|SMALL ribosomal subunit protein uS5|Saccharolobus islandicus (strain

Query: 2 DRELPVT 8
DR LP+T
Sbjct: 36 DRNLPIT 42


>sp|QUEC_THEVO|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DRELPVTY 9
+ E+PVTY
Sbjct: 88 EEEIPVTY 95


>sp|FER_THEAC|ZINC-CONTAINING ferredoxin|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NDRELPVT 8
ND++ PVT
Sbjct: 21 NDKDYPVT 28


>sp|PCP_THEON|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus onnurineus (strain NA1)

Query: 3 RELPVTY 9
R+LPVT+
Sbjct: 38 RQLPVTF 44


>sp|RISB_HALLT|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 DRELPVTY 9
DR+ PVT+
Sbjct: 93 DRDTPVTF 100


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NDRELPVTYS 10
ND+++ V YS
Sbjct: 643 NDKDIVVNYS 652


>sp|QUEC_THEAC|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 ELPVTY 9
E+PVTY
Sbjct: 91 EIPVTY 96




86|SequenceR|435|426|LFEESNDREL

>sp|PSTB_METMA|PHOSPHATE import ATP-binding protein PstB|Methanosarcina mazei (strain ATCC

Query: 1 LFEESNDR 8
LFEE++DR
Sbjct: 140 LFEETSDR 147


>sp|RL4_SACI2|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 LFEESNDRE 9
L EE+ND+E
Sbjct: 107 LVEEANDKE 115


>sp|TTDA_METJA|PUTATIVE L(+)-tartrate dehydratase subunit alpha|Methanocaldococcus

Query: 2 FEESNDREL 10
F+ES DRE+
Sbjct: 129 FDESLDREI 137


>sp|Y1356_METJA|UNCHARACTERIZED protein MJ1356|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LFEESNDREL 10
LFE SND +L
Sbjct: 80 LFEISNDSDL 89


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 1 LFEESNDREL 10
L EE NDR +
Sbjct: 29 LGEEGNDRRI 38




87|SequenceR|440|431|RAERKLFEES

>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 RKLFEES 10
+KLFEES
Sbjct: 14 KKLFEES 20


>sp|HMDY_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 1 RAERKLFE 8
R+ RKLFE
Sbjct: 345 RSARKLFE 352


>sp|CAPPA_METS5|PHOSPHOENOLPYRUVATE carboxylase|Metallosphaera sedula (strain ATCC 51363

Query: 2 AERKLFEES 10
AERK+F E+
Sbjct: 96 AERKVFAET 104


>sp|RS6E_AERPE|SMALL ribosomal subunit protein eS6|Aeropyrum pernix (strain ATCC

Query: 1 RAERKLFEE 9
R RKL+EE
Sbjct: 53 RVSRKLYEE 61


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 4 RKLFEES 10
R+LFEES
Sbjct: 11 RELFEES 17


>sp|CAPPA_SULAC|PHOSPHOENOLPYRUVATE carboxylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 AERKLFEES 10
AERK+F E+
Sbjct: 96 AERKVFAET 104


>sp|Y897_ARCFU|UNCHARACTERIZED protein AF_0897|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AERKLFEES 10
AERK +EE+
Sbjct: 340 AERKAYEEA 348




88|SequenceR|445|436|ALQNARAERK

***** No hits found ******


89|SequenceR|450|441|SEIEEALQNA

>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 2 EIEEALQNA 10
EIEEAL+N
Sbjct: 559 EIEEALKNV 567


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 2 EIEEALQN 9
EIEE LQN
Sbjct: 579 EIEEKLQN 586


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 IEEALQNA 10
++EA+QNA
Sbjct: 217 VDEAVQNA 224


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SEIEEALQNA 10
SEIEEA + A
Sbjct: 796 SEIEEAFEVA 805


>sp|PANB_STAMF|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 3 IEEALQNA 10
IEEA++NA
Sbjct: 93 IEEAVRNA 100


>sp|RL12_METJA|LARGE ribosomal subunit protein P1|Methanocaldococcus jannaschii

Query: 2 EIEEALQNA 10
+IEEA+ NA
Sbjct: 49 DIEEAIANA 57




90|SequenceR|455|446|KYQASSEIEE

>sp|FEN_THESM|FLAP endonuclease 1|Thermococcus sibiricus (strain DSM 12597

Query: 1 KYQASSEIE 9
KYQ +SE++
Sbjct: 263 KYQKTSEVD 271




91|SequenceR|460|451|LAVRAKYQAS

>sp|RS9_METTP|SMALL ribosomal subunit protein uS9|Methanothrix thermoacetophila (strain

Query: 1 LAVRAKYQAS 10
L RAKYQ S
Sbjct: 121 LGARAKYQKS 130


>sp|PSA_METKA|PROTEASOME subunit alpha|Methanopyrus kandleri (strain AV19 /

Query: 1 LAVRAKYQAS 10
LAVRA Y+AS
Sbjct: 194 LAVRALYEAS 203


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 3 VRAKYQAS 10
VRA YQ+S
Sbjct: 345 VRASYQSS 352


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 3 VRAKYQAS 10
VRA YQ+S
Sbjct: 345 VRASYQSS 352


>sp|PSB_METMS|PROTEASOME subunit beta|Methanohalophilus mahii (strain ATCC 35705

Query: 1 LAVRAKYQA 9
LAVRA Y A
Sbjct: 165 LAVRALYNA 173




92|SequenceR|465|456|RDDNELAVRA

***** No hits found ******


93|SequenceR|470|461|KEEESRDDNE

>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 KEEESRDDNE 10
EEE+ DDNE
Sbjct: 169 PEEENADDNE 178


>sp|G3P_METHJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KEEESRDD 8
K+E SRDD
Sbjct: 229 KKEVSRDD 236




94|SequenceR|475|466|QVATYKEEES

***** No hits found ******


95|SequenceR|480|471|ESSNRQVATY

>sp|CAS6_PYRFU|CRISPR-ASSOCIATED endoribonuclease Cas6|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ESSNRQVATY 10
+SSN ++ATY
Sbjct: 35 KSSNPKLATY 44




96|SequenceR|485|476|SHGERESSNR

>sp|COBS_HALLT|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 HGERESSNR 10
HG+RE R
Sbjct: 89 HGDREERRR 97


>sp|RNP2_METTH|RIBONUCLEASE P protein component 2|Methanothermobacter thermautotrophicus

Query: 2 HGERESSN 9
HGE E+SN
Sbjct: 42 HGECETSN 49




97|SequenceR|490|481|ERTNISHGER

>sp|AROB_PICTO|3-DEHYDROQUINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 4 NISHGE 9
NISHGE
Sbjct: 242 NISHGE 247




98|SequenceR|495|486|PIYKNERTNI

>sp|Y1652_METMP|UNCHARACTERIZED solute-binding protein MMP1652|Methanococcus maripaludis (strain

Query: 2 IYKNERTNI 10
+Y+NE TN+
Sbjct: 44 LYENEYTNV 52


>sp|DUT_METMA|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 2 IYKNERTN 9
+Y+NE TN
Sbjct: 164 VYQNENTN 171


>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 PIYKNER 7
P++KNE+
Sbjct: 444 PVFKNEK 450


>sp|AATE_PYRAB|A-TYPE ATP synthase subunit E|Pyrococcus abyssi (strain GE5 /

Query: 2 IYKNERT 8
+Y NERT
Sbjct: 124 VYSNERT 130




99|SequenceR|500|491|NRQGPPIYKN

>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 QGPPIYKN 10
+GPP+Y N
Sbjct: 342 RGPPVYDN 349


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 2 RQGPPIY 8
R GPP+Y
Sbjct: 367 RTGPPVY 373


>sp|CCA_METJA|CCA-ADDING enzyme|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RQGPPIYK 9
R+GPP+++
Sbjct: 365 REGPPVFE 372


>sp|MSRA_NATPD|PEPTIDE methionine sulfoxide reductase MsrA|Natronomonas pharaonis

Query: 1 NRQGPPI 7
NRQGP +
Sbjct: 84 NRQGPDV 90


>sp|MSRA_HALWD|PEPTIDE methionine sulfoxide reductase MsrA|Haloquadratum walsbyi (strain

Query: 1 NRQGPPI 7
NRQGP +
Sbjct: 84 NRQGPDV 90


>sp|MSRA_METTH|PEPTIDE methionine sulfoxide reductase MsrA|Methanothermobacter

Query: 1 NRQGPPI 7
NRQGP +
Sbjct: 89 NRQGPDV 95


>sp|MSRA_METAC|PEPTIDE methionine sulfoxide reductase MsrA|Methanosarcina acetivorans

Query: 1 NRQGPPIYK 9
NRQGP + K
Sbjct: 110 NRQGPDVGK 118


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 QGPPIYKN 10
+GPP+Y +
Sbjct: 345 KGPPVYDD 352


>sp|MSRA_METHJ|PEPTIDE methionine sulfoxide reductase MsrA|Methanospirillum hungatei

Query: 1 NRQGPPI 7
NRQGP +
Sbjct: 83 NRQGPDV 89


>sp|MCRA_METVA|METHYL-COENZYME M reductase subunit alpha|Methanococcus vannielii

Query: 2 RQGPPIY 8
RQG P+Y
Sbjct: 54 RQGVPLY 60


>sp|FLPA_HALLT|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Halorubrum lacusprofundi (strain

Query: 3 QGPPIY 8
+GPP+Y
Sbjct: 24 RGPPVY 29


>sp|MSRA_METMJ|PEPTIDE methionine sulfoxide reductase MsrA|Methanoculleus marisnigri

Query: 1 NRQGPPI 7
NRQGP I
Sbjct: 89 NRQGPDI 95


>sp|CCA_PYRIL|CCA-ADDING enzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 3 QGPPIY 8
+GPP+Y
Sbjct: 344 RGPPVY 349


>sp|Y875_PYRAE|PROTEIN PAE0875|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 QGPPIY 8
+GPP+Y
Sbjct: 173 RGPPVY 178


>sp|Y096_PYRAR|PROTEIN Pars_0096|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 QGPPIY 8
+GPP+Y
Sbjct: 174 RGPPVY 179


>sp|Y3524_METJA|UNCHARACTERIZED protein MJECL24|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RQGPPIYK 9
R+G P++K
Sbjct: 229 REGKPVFK 236




100|SequenceR|505|496|SIVERNRQGP

>sp|RPO2N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 2 IVERNRQG 9
+VERNR+G
Sbjct: 208 LVERNREG 215


>sp|RPO2N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 2 IVERNRQG 9
+VERNR+G
Sbjct: 208 LVERNREG 215


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 IVERNRQGP 10
++E+NR GP
Sbjct: 31 VLEKNRDGP 39


>sp|RNP3_METBF|RIBONUCLEASE P protein component 3|Methanosarcina barkeri (strain Fusaro /

Query: 2 IVERNRQGP 10
I+ RNR GP
Sbjct: 215 IISRNRPGP 223


>sp|MPTE_METTH|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 2 IVERNRQG 9
I+E NRQG
Sbjct: 109 IIEANRQG 116


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 3 VERNRQGP 10
VER R+GP
Sbjct: 411 VERTRRGP 418


>sp|MSRA_METAC|PEPTIDE methionine sulfoxide reductase MsrA|Methanosarcina acetivorans

Query: 5 RNRQGP 10
+NRQGP
Sbjct: 109 KNRQGP 114


>sp|RNP3_METMA|RIBONUCLEASE P protein component 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IVERNRQGP 10
I+++NR GP
Sbjct: 215 IIKKNRPGP 223


>sp|ACYP_SACS2|ACYLPHOSPHATASE solfataricus (strain ATCC 35092

Query: 2 IVERNRQGP 10
++ER +QGP
Sbjct: 68 LLERIKQGP 76


>sp|RNP3_HALMA|RIBONUCLEASE P protein component 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 IVERNRQ 8
IVERNR+
Sbjct: 208 IVERNRE 214


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 SIVERNRQG 9
S++ER R G
Sbjct: 96 SVIERERHG 104


>sp|RNP3_METAC|RIBONUCLEASE P protein component 3|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IVERNRQGP 10
I+ +NR GP
Sbjct: 215 IIAKNRPGP 223




101|SequenceR|510|501|RGSGWSIVER

>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 RGSGWSIVE 9
RGS W I+E
Sbjct: 432 RGSMWDIIE 440


>sp|Y911_METJA|MAGNESIUM-CHELATASE subunit ChlI homolog|Methanocaldococcus jannaschii (strain ATCC

Query: 4 GWSIVER 10
GW+I+ER
Sbjct: 162 GWNIIER 168


>sp|PRIL_HALMA|DNA primase large subunit PriL|Haloarcula marismortui (strain ATCC

Query: 1 RGSGWSIVER 10
RG W +V R
Sbjct: 152 RGDSWRLVNR 161


>sp|SODF_SULAC|SUPEROXIDE dismutase [Fe]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GSGWSIV 8
GSGW+++
Sbjct: 133 GSGWTVL 139


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GSGWSIV 8
G GW+IV
Sbjct: 72 GDGWAIV 78


>sp|SODF_METTH|SUPEROXIDE dismutase [Fe]|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GSGWSIV 8
GSGW+++
Sbjct: 129 GSGWAVL 135


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GSGWSIV 8
G GW+IV
Sbjct: 72 GDGWAIV 78


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GSGWSIV 8
G GW+IV
Sbjct: 72 GDGWAIV 78


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 2 GSGWSIV 8
G GW+IV
Sbjct: 72 GDGWAIV 78


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 GSGWSIV 8
G GW+IV
Sbjct: 72 GDGWAIV 78


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GSGWSIV 8
G GW+IV
Sbjct: 72 GDGWAIV 78


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 GSGWSIV 8
G GW+IV
Sbjct: 72 GDGWAIV 78


>sp|HPRT_METVS|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 RGSGWSIVER 10
RG G +IVE+
Sbjct: 153 RGQGKNIVEK 162


>sp|SODF_METTM|SUPEROXIDE dismutase [Fe]|Methanothermobacter marburgensis (strain ATCC

Query: 2 GSGWSIV 8
GSGW+++
Sbjct: 126 GSGWAVL 132


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 5 WSIVER 10
WS+VER
Sbjct: 72 WSVVER 77


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 5 WSIVER 10
WS+VER
Sbjct: 72 WSVVER 77


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 5 WSIVER 10
WS+VER
Sbjct: 72 WSVVER 77


>sp|HPRT_METMP|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 RGSGWSIVE 9
RG+G +IVE
Sbjct: 153 RGNGQNIVE 161


>sp|HPRT_METM5|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 RGSGWSIVE 9
RG+G +IVE
Sbjct: 153 RGNGQNIVE 161


>sp|IF2P_THESM|PROBABLE translation initiation factor IF-2|Thermococcus sibiricus (strain

Query: 1 RGSGWSIVE 9
R GW +VE
Sbjct: 135 RIKGWKVVE 143


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC

Query: 2 GSGWSIV 8
G GW++V
Sbjct: 72 GDGWAVV 78


>sp|RL30E_SACS2|LARGE ribosomal subunit protein eL30|Saccharolobus solfataricus (strain

Query: 1 RGSGWSI 7
+GSGW +
Sbjct: 72 KGSGWDL 78


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 WSIVER 10
WSI+ER
Sbjct: 358 WSIIER 363


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 2 GSGWSIV 8
G GW +V
Sbjct: 101 GDGWKVV 107


>sp|PYRK_METAR|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocella arvoryzae

Query: 2 GSGWSIV 8
G+GW IV
Sbjct: 85 GNGWEIV 91


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 WSIVER 10
WSI+ER
Sbjct: 358 WSIIER 363


>sp|PURO_METTH|IMP cyclohydrolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GSGWSIVER 10
G GW++ R
Sbjct: 192 GEGWNLATR 200


>sp|GLCD1_PICTO|GLUCOSE 1-dehydrogenase 1|Picrophilus torridus (strain ATCC 700027

Query: 2 GSGWSIVER 10
GSG ++ER
Sbjct: 242 GSGTDVIER 250




102|SequenceR|515|506|RPSNQRGSGW

>sp|CUTB_SULAC|GLYCERALDEHYDE dehydrogenase medium chain|Sulfolobus acidocaldarius (strain ATCC

Query: 2 PSNQRGSGW 10
PS+ RGS W
Sbjct: 255 PSDHRGSSW 263


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PSNQRGSG 9
PS Q GSG
Sbjct: 1671 PSEQTGSG 1678


>sp|RS2_CENSY|SMALL ribosomal subunit protein uS2|Cenarchaeum symbiosum (strain A)

Query: 2 PSNQRGSG 9
P+N RG G
Sbjct: 159 PANNRGRG 166


>sp|Y257_ARCFU|UNCHARACTERIZED protein AF_0257|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RPSNQRGSG 9
RPS + GSG
Sbjct: 75 RPSKKCGSG 83


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NQRGSGW 10
NQ+GS W
Sbjct: 1833 NQKGSVW 1839


>sp|FLAB5_PYRHO|FLAGELLIN B5|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PSNQRGSG 9
PSN GSG
Sbjct: 64 PSNPPGSG 71


>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RPSNQRGSG 9
RP RGSG
Sbjct: 107 RPPELRGSG 115


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RPSNQRGSG 9
RP RGSG
Sbjct: 107 RPPELRGSG 115




103|SequenceR|520|511|GPQGMRPSNQ

>sp|CDC6_DESA1|ORC1-TYPE DNA replication protein|Desulfurococcus amylolyticus (strain DSM

Query: 3 QGMRPSN 9
QGMRPSN
Sbjct: 53 QGMRPSN 59


>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain

Query: 2 PQGMRPS 8
P+GMRPS
Sbjct: 6 PKGMRPS 12


>sp|NUCS_AERPE|ENDONUCLEASE NucS|Aeropyrum pernix (strain ATCC 700893

Query: 1 GPQGMRPSN 9
GP+G RP N
Sbjct: 73 GPRGFRPLN 81


>sp|Y289_METJA|UNCHARACTERIZED protein MJ0289|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PQGMRPSN 9
PQG PSN
Sbjct: 125 PQGQSPSN 132


>sp|Y534_METJA|UNCHARACTERIZED protein MJ0534|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QGMRPSNQ 10
+G++PSN+
Sbjct: 322 EGLKPSNK 329


>sp|PYRB_KORCO|ASPARTATE carbamoyltransferase catalytic subunit|Korarchaeum cryptofilum

Query: 2 PQGMRPSNQ 10
P+G+RP +
Sbjct: 183 PEGLRPKQE 191


>sp|CAS1_METKA|CRISPR-ASSOCIATED endonuclease Cas1|Methanopyrus kandleri (strain AV19 /

Query: 1 GPQGMRP 7
GP+G RP
Sbjct: 222 GPRGRRP 228


>sp|PGMI_PYRAE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Pyrobaculum aerophilum

Query: 2 PQGMRPSNQ 10
P+G+ P N+
Sbjct: 160 PEGLEPPNE 168


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 1 GPQGMR 6
GPQG+R
Sbjct: 361 GPQGLR 366


>sp|TRUB_KORCO|PROBABLE tRNA pseudouridine synthase B|Korarchaeum cryptofilum (strain

Query: 1 GPQGMRPSNQ 10
GP G RP +
Sbjct: 17 GPYGYRPQER 26




104|SequenceR|525|516|PMSGSGPQGM

>sp|TRM1_PYRIL|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum islandicum

Query: 1 PMSGSGPQGM 10
P+SG+G +G+
Sbjct: 58 PLSGTGIRGI 67


>sp|THI4_SULTO|THIAMINE thiazole synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GSGPQGM 10
G+GP GM
Sbjct: 40 GAGPSGM 46


>sp|TRM1_PYRCJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum calidifontis

Query: 1 PMSGSGPQGM 10
P+SG+G +G+
Sbjct: 62 PLSGTGIRGI 71


>sp|THI4_PYRAB|THIAMINE thiazole synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 GSGPQGM 10
G+GP GM
Sbjct: 31 GAGPSGM 37


>sp|TRM1_PYRNV|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum neutrophilum

Query: 1 PMSGSGPQGM 10
P+SG+G +G+
Sbjct: 58 PLSGTGVRGI 67


>sp|THI4_PYRHO|THIAMINE thiazole synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GSGPQGM 10
G+GP GM
Sbjct: 31 GAGPSGM 37


>sp|THI4_PYRFU|THIAMINE thiazole synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GSGPQGM 10
G+GP GM
Sbjct: 31 GAGPSGM 37


>sp|THI4_SULAC|THIAMINE thiazole synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 GSGPQGM 10
G+GP GM
Sbjct: 39 GAGPAGM 45


>sp|TRM1_PYRAR|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum arsenaticum

Query: 1 PMSGSGPQGM 10
P+SG+G +G+
Sbjct: 60 PLSGTGVRGI 69


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 SGPQGM 10
SGPQG+
Sbjct: 230 SGPQGL 235


>sp|TRM1_PYRAE|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum aerophilum

Query: 1 PMSGSGPQGM 10
P+SG+G +G+
Sbjct: 60 PLSGTGVRGI 69


>sp|EF1A_CALMQ|ELONGATION factor 1-alpha|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 SGSGPQG 9
SG GPQG
Sbjct: 134 SGVGPQG 140


>sp|CDPAS_METST|CDP-ARCHAEOL synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 MSGSGPQGM 10
MSG PQG+
Sbjct: 92 MSGFVPQGL 100




105|SequenceR|530|521|STSRSPMSGS

***** No hits found ******


106|SequenceR|535|526|FDSTHSTSRS

>sp|SYH_HALMA|HISTIDINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 FDSTHSTSRS 10
FDST SRS
Sbjct: 281 FDSTGEVSRS 290


>sp|SYH_HALLT|HISTIDINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 FDSTHSTSRS 10
FDST SRS
Sbjct: 285 FDSTGEVSRS 294




107|SequenceR|540|531|GSNPNFDSTH

>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 NPNFDSTH 10
NP FD +H
Sbjct: 52 NPGFDESH 59


>sp|TOP6A_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 1 GSNPNFD 7
G NP+FD
Sbjct: 40 GKNPHFD 46


>sp|AROD_METS3|3-DEHYDROQUINATE dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 NPNFD 7
NPNFD
Sbjct: 43 NPNFD 47


>sp|DCD_HALWD|DCTP deaminase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GSNPNFDST 9
G +P FD T
Sbjct: 186 GEDPEFDQT 194


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SNPNFD 7
SNPN+D
Sbjct: 176 SNPNWD 181


>sp|PURL_HALLT|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 GSNPNFDST 9
G+NPN+ T
Sbjct: 483 GANPNWTET 491




108|SequenceR|545|536|VRQDSGSNPN

>sp|EF2_THESM|ELONGATION factor 2|Thermococcus sibiricus (strain DSM 12597

Query: 1 VRQDSGSNPN 10
+RQ G NPN
Sbjct: 712 IRQRKGLNPN 721


>sp|FTSY_THEAC|SIGNAL recognition particle receptor FtsY|Thermoplasma acidophilum (strain

Query: 1 VRQDSGSNPN 10
+R D GS+P+
Sbjct: 145 IRHDRGSDPS 154


>sp|T1M2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii (strain

Query: 5 SGSNPN 10
+GSNPN
Sbjct: 291 AGSNPN 296


>sp|TIAS_CENSY|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Cenarchaeum symbiosum (strain

Query: 1 VRQDSGSNP 9
+R++SGS+P
Sbjct: 333 IRRESGSHP 341


>sp|RNH2_PYRAE|RIBONUCLEASE HII|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RQDSGSNP 9
R +SG NP
Sbjct: 200 RHESGENP 207




109|SequenceR|550|541|VGGNVVRQDS

>sp|ANTRP_HALVD|PROBABLE anion ABC transporter permease|Haloferax volcanii (strain ATCC

Query: 1 VGGNVVRQDS 10
VGGN+V DS
Sbjct: 167 VGGNIVFSDS 176




110|SequenceR|555|546|PSPWPVGGNV

>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 SPWPVGGN 9
SPW GGN
Sbjct: 187 SPWAGGGN 194


>sp|RADA_CENSY|DNA repair and recombination protein|Cenarchaeum symbiosum (strain A)

Query: 5 PVGGNV 10
PVGGNV
Sbjct: 270 PVGGNV 275


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PWPVGGN 9
PW GGN
Sbjct: 191 PWSGGGN 197


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PWPVGGN 9
PW GGN
Sbjct: 191 PWSGGGN 197


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PWPVGGN 9
PW GGN
Sbjct: 188 PWAGGGN 194


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PWPVGGN 9
PW GGN
Sbjct: 188 PWAGGGN 194


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PWPVGGN 9
PW GGN
Sbjct: 188 PWAGGGN 194


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PWPVGGN 9
PW GGN
Sbjct: 190 PWAGGGN 196


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PWPVGGN 9
PW GGN
Sbjct: 188 PWAGGGN 194


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SPWPVGGN 9
+PW GGN
Sbjct: 190 NPWAGGGN 197


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SPWPVGGN 9
+PW GGN
Sbjct: 190 NPWAGGGN 197


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 SPWPVGGN 9
+PW GGN
Sbjct: 190 NPWAGGGN 197


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SPWPVGGN 9
+PW GGN
Sbjct: 190 NPWAGGGN 197


>sp|RADA_THEVO|DNA repair and recombination protein|Thermoplasma volcanium (strain

Query: 5 PVGGNV 10
P+GGN+
Sbjct: 271 PIGGNI 276


>sp|RADA_THEAC|DNA repair and recombination protein|Thermoplasma acidophilum (strain

Query: 5 PVGGNV 10
P+GGN+
Sbjct: 271 PIGGNI 276


>sp|RADA_PICTO|DNA repair and recombination protein|Picrophilus torridus (strain ATCC

Query: 5 PVGGNV 10
P+GGN+
Sbjct: 270 PIGGNI 275


>sp|RADA_METMJ|DNA repair and recombination protein|Methanoculleus marisnigri (strain

Query: 5 PVGGNV 10
P+GGN+
Sbjct: 273 PIGGNI 278


>sp|RADA_HALWD|DNA repair and recombination protein|Haloquadratum walsbyi (strain DSM

Query: 5 PVGGNV 10
P+GGN+
Sbjct: 292 PIGGNI 297


>sp|RADA_HALVD|DNA repair and recombination protein|Haloferax volcanii (strain ATCC

Query: 5 PVGGNV 10
P+GGN+
Sbjct: 292 PIGGNI 297


>sp|RADA_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 5 PVGGNV 10
P+GGN+
Sbjct: 292 PIGGNI 297


>sp|RADA_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 5 PVGGNV 10
P+GGN+
Sbjct: 292 PIGGNI 297


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PWPVGGN 9
PW GGN
Sbjct: 202 PWVGGGN 208


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PWPVGGN 9
PW GGN
Sbjct: 200 PWVGGGN 206


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PWPVGGN 9
PW GGN
Sbjct: 198 PWVGGGN 204


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 PWPVGGN 9
PW GGN
Sbjct: 198 PWVGGGN 204


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PWPVGGN 9
PW GGN
Sbjct: 201 PWVGGGN 207


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 PWPVGGN 9
PW GGN
Sbjct: 201 PWVGGGN 207


>sp|HIS8_HALWD|HISTIDINOL-PHOSPHATE aminotransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 WPVGGN 9
WP GGN
Sbjct: 294 WPSGGN 299


>sp|RADA_METLZ|DNA repair and recombination protein|Methanocorpusculum labreanum

Query: 5 PVGGNV 10
P+GGN+
Sbjct: 278 PIGGNI 283


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PWPVGGN 9
PW GGN
Sbjct: 187 PWIGGGN 193


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 PWPVGGN 9
PW GGN
Sbjct: 187 PWIGGGN 193


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 SPWPVGGN 9
+PW GGN
Sbjct: 186 NPWFGGGN 193


>sp|THIL_METJA|THIAMINE-MONOPHOSPHATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SPWPVGGNV 10
SP+ +GG +
Sbjct: 58 SPYEIGGRI 66


>sp|MFNA_METHJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanospirillum hungatei JF-1

Query: 1 PSPWPV 6
PSPW V
Sbjct: 327 PSPWVV 332


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PWPVGGN 9
PW GGN
Sbjct: 187 PWYGGGN 193


>sp|PPAC_ARCFU|PROBABLE manganese-dependent inorganic pyrophosphatase|Archaeoglobus

Query: 4 WPVGGNV 10
W GGNV
Sbjct: 31 WKEGGNV 37




111|SequenceR|560|551|SPSPCPSPWP

>sp|ENGB_META3|PROBABLE GTP-binding protein EngB|Methanococcus aeolicus (strain ATCC

Query: 5 CPSPW 9
CP+PW
Sbjct: 183 CPAPW 187


>sp|DPHB_METAR|DIPHTHINE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 SPSPC 5
SPSPC
Sbjct: 209 SPSPC 213


>sp|HJC_ARCFU|CROSSOVER junction endodeoxyribonuclease Hjc|Archaeoglobus fulgidus (strain

Query: 1 SPSPCP 6
SP PCP
Sbjct: 32 SPFPCP 37


>sp|TRUB_NANEQ|PROBABLE tRNA pseudouridine synthase B|Nanoarchaeum equitans (strain

Query: 5 CPSPW 9
CP PW
Sbjct: 20 CPLPW 24


>sp|TRPD_META3|ANTHRANILATE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 SPSPCPSP 8
+P PC SP
Sbjct: 251 NPIPCNSP 258


>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 CPSPWP 10
CP P+P
Sbjct: 142 CPYPYP 147


>sp|TRPD_THEKO|ANTHRANILATE phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 PSPCPSP 8
P PC SP
Sbjct: 251 PLPCSSP 257


>sp|NREB_ARCFU|DNA repair protein NreB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 CPSPW 9
CPSPW
Sbjct: 251 CPSPW 255


>sp|Y085_METJA|UNCHARACTERIZED lipoprotein MJ0085|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PCPSPWP 10
PCP P P
Sbjct: 114 PCPKPNP 120


>sp|Y3242_HALS3|UPF0284 protein OE_3242F|Halobacterium salinarum (strain ATCC 29341

Query: 1 SPSPCPSP 8
SPS CP+P
Sbjct: 59 SPSGCPTP 66


>sp|Y1572_HALSA|UPF0284 protein VNG_1572C|Halobacterium salinarum (strain ATCC 700922

Query: 1 SPSPCPSP 8
SPS CP+P
Sbjct: 59 SPSGCPTP 66


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SPSPCPSP 8
SP P P+P
Sbjct: 518 SPGPLPAP 525


>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SPSPCPSP 8
+P+P P P
Sbjct: 153 NPTPAPEP 160


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PSPCPSPW 9
P+P +PW
Sbjct: 185 PNPYRNPW 192


>sp|IF2G_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter thermautotrophicus

Query: 4 PCPSP 8
PCP P
Sbjct: 118 PCPQP 122


>sp|IF2G_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 4 PCPSP 8
PCP P
Sbjct: 120 PCPQP 124


>sp|SEPS_METAC|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PSPCPSP 8
PSPC P
Sbjct: 399 PSPCEFP 405


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PSPCPSP 8
PSPC P
Sbjct: 399 PSPCEFP 405


>sp|SEPS_METMA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PSPCPSP 8
PSPC P
Sbjct: 399 PSPCEFP 405


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PSPCP 6
P PCP
Sbjct: 429 PEPCP 433


>sp|GGGPS_STAMF|GERANYLGERANYLGLYCERYL phosphate synthase|Staphylothermus marinus (strain ATCC 43588

Query: 1 SPSPCPSPWP 10
SP P P +P
Sbjct: 179 SPKPVPPSFP 188


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 2 PSPCPS 7
P PCP+
Sbjct: 373 PEPCPN 378


>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 2 PSPCPSP 8
PSP P P
Sbjct: 24 PSPLPEP 30


>sp|MTRA2_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanothermobacter

Query: 4 PCPSPWP 10
P P WP
Sbjct: 9 PVPEDWP 15


>sp|IF2G_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 PCPSP 8
PCP P
Sbjct: 119 PCPQP 123




112|SequenceR|565|556|SPPRSSPSPC

>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus solfataricus

Query: 2 PPRSSPSP 9
PP S+P P
Sbjct: 199 PPSSTPLP 206


>sp|TRMBR_HALSA|HTH-TYPE sugar sensing transcriptional regulator|Halobacterium salinarum

Query: 1 SPPRSSPSP 9
SP R++P+P
Sbjct: 167 SPARNAPNP 175


>sp|DPHB_METAR|DIPHTHINE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 6 SPSPC 10
SPSPC
Sbjct: 209 SPSPC 213


>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 5 SSPSPC 10
S+PSPC
Sbjct: 395 SAPSPC 400


>sp|HEM3_METTH|PROBABLE porphobilinogen deaminase|Methanothermobacter thermautotrophicus

Query: 2 PPRSSPS 8
PPR SP+
Sbjct: 93 PPRESPA 99


>sp|SEPS_ARCFU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 SSPSPC 10
S PSPC
Sbjct: 393 SEPSPC 398


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 2 PPRSSPS 8
PPR++PS
Sbjct: 313 PPRAAPS 319


>sp|MRE11_METMA|DNA double-strand break repair protein|Methanosarcina mazei (strain

Query: 1 SPPRSSPSP 9
SPP S PSP
Sbjct: 550 SPPESIPSP 558


>sp|SURE_METHJ|5'-NUCLEOTIDASE SurE|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SPPRSSPS 8
SPP S+PS
Sbjct: 5 SPPDSTPS 12


>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 5 SSPSPC 10
S PSPC
Sbjct: 397 SEPSPC 402


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PPRSSPS 8
PPR PS
Sbjct: 409 PPRGKPS 415


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PPRSSPSP 9
PP PSP
Sbjct: 409 PPPGKPSP 416




113|SequenceR|570|561|GSQYRSPPRS

>sp|RL2_CALMQ|LARGE ribosomal subunit protein uL2|Caldivirga maquilingensis (strain

Query: 1 GSQYRSP 7
GSQ+RSP
Sbjct: 14 GSQFRSP 20


>sp|MSRA_NATPD|PEPTIDE methionine sulfoxide reductase MsrA|Natronomonas pharaonis

Query: 1 GSQYRS 6
GSQYRS
Sbjct: 91 GSQYRS 96


>sp|RL2_PYRIL|LARGE ribosomal subunit protein uL2|Pyrobaculum islandicum (strain DSM

Query: 1 GSQYRSP 7
GSQ+RSP
Sbjct: 14 GSQFRSP 20


>sp|RL2_PYRAE|LARGE ribosomal subunit protein uL2|Pyrobaculum aerophilum (strain ATCC

Query: 1 GSQYRSP 7
GSQ+RSP
Sbjct: 14 GSQFRSP 20


>sp|RL2_PYRNV|LARGE ribosomal subunit protein uL2|Pyrobaculum neutrophilum (strain

Query: 1 GSQYRSP 7
GSQ+RSP
Sbjct: 14 GSQFRSP 20


>sp|RL2_PYRAR|LARGE ribosomal subunit protein uL2|Pyrobaculum arsenaticum (strain DSM

Query: 1 GSQYRSP 7
GSQ+RSP
Sbjct: 14 GSQFRSP 20


>sp|RL2_PYRCJ|LARGE ribosomal subunit protein uL2|Pyrobaculum calidifontis (strain

Query: 1 GSQYRSP 7
GSQ+RSP
Sbjct: 14 GSQFRSP 20


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 GSQYRSPP 8
G +YR PP
Sbjct: 1056 GERYRRPP 1063


>sp|MSRA_HALSA|PEPTIDE methionine sulfoxide reductase MsrA|Halobacterium salinarum

Query: 1 GSQYRS 6
GSQYRS
Sbjct: 92 GSQYRS 97


>sp|MSRA_HALS3|PEPTIDE methionine sulfoxide reductase MsrA|Halobacterium salinarum

Query: 1 GSQYRS 6
GSQYRS
Sbjct: 92 GSQYRS 97


>sp|MSRA_SULAC|PEPTIDE methionine sulfoxide reductase MsrA|Sulfolobus acidocaldarius

Query: 1 GSQYRS 6
GSQYRS
Sbjct: 90 GSQYRS 95


>sp|DPCKG_PYRNV|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 YRSPPRS 10
+R PPRS
Sbjct: 22 WREPPRS 28


>sp|MSRA_METHJ|PEPTIDE methionine sulfoxide reductase MsrA|Methanospirillum hungatei

Query: 1 GSQYRS 6
GSQYRS
Sbjct: 90 GSQYRS 95


>sp|DPCKG_PYRAR|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SQYRSPPRS 10
+ +R PPRS
Sbjct: 20 TVWRDPPRS 28


>sp|DCDA_METTH|DIAMINOPIMELATE decarboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 SQYRSPPR 9
SQY S PR
Sbjct: 385 SQYNSRPR 392


>sp|CAS5_HALVD|CRISPR-ASSOCIATED protein Cas5|Haloferax volcanii (strain ATCC 29605

Query: 4 YRSPPRS 10
YR PPR+
Sbjct: 38 YRIPPRT 44


>sp|XYLF_SULAC|XYLOSE/ARABINOSE-BINDING protein XylF|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SQYRSPP 8
SQY +PP
Sbjct: 184 SQYHNPP 190




114|SequenceR|575|566|PLSNPGSQYR

>sp|Y1233_METJA|UNCHARACTERIZED protein MJ1233|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LSNPGSQYR 10
+ NPG +YR
Sbjct: 244 VGNPGKKYR 252


>sp|TRPD_PYRAE|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PLSNPG 6
PL+NPG
Sbjct: 180 PLANPG 185


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PLSNPGSQYR 10
P +NPG Q R
Sbjct: 134 PHANPGDQTR 143


>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 1 PLSNPGSQYR 10
PL+NPG R
Sbjct: 180 PLANPGCVKR 189


>sp|TRPD_CALMQ|ANTHRANILATE phosphoribosyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 PLSNPG 6
PL+NPG
Sbjct: 179 PLANPG 184


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PLSNPGSQYR 10
P +NPG Q R
Sbjct: 137 PHANPGDQTR 146


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PLSNPGSQYR 10
P +NPG Q R
Sbjct: 137 PHANPGDQTR 146


>sp|TRPD_PYRIL|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PLSNPG 6
PL+NPG
Sbjct: 178 PLANPG 183


>sp|CDC62_SULTO|ORC1-TYPE DNA replication protein 2|Sulfurisphaera tokodaii (strain DSM

Query: 2 LSNPGS 7
LSNPGS
Sbjct: 54 LSNPGS 59


>sp|TRPD_PYRAR|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PLSNPG 6
PL+NPG
Sbjct: 180 PLANPG 185


>sp|Y378_NANEQ|UPF0173 metal-dependent hydrolase NEQ378|Nanoarchaeum equitans (strain

Query: 1 PLSNPG 6
PL NPG
Sbjct: 109 PLGNPG 114


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 PLSNPGSQY 9
P S PGS Y
Sbjct: 788 PSSYPGSSY 796


>sp|BASB_HALS3|CHEMOTACTIC signal transduction system substrate-binding|Halobacterium

Query: 1 PLSNPGS 7
PLS PGS
Sbjct: 41 PLSGPGS 47


>sp|NUCS1_HALSA|ENDONUCLEASE NucS 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 PLSNPGSQYR 10
P+S PGS+ R
Sbjct: 231 PVSPPGSRDR 240


>sp|CBSA_SULAC|CYTOCHROME b558/566 subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LSNPGS 7
LSNPGS
Sbjct: 49 LSNPGS 54


>sp|CBSA_SACS2|CYTOCHROME b558/566 subunit A|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LSNPGS 7
LSNPGS
Sbjct: 57 LSNPGS 62




115|SequenceR|580|571|TAARPPLSNP

>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 AARPPLSNP 10
A RP LS+P
Sbjct: 319 AGRPVLSHP 327


>sp|NAR7_HALMT|PUTATIVE respiratory nitrate reductase heme|Haloferax mediterranei (strain

Query: 1 TAARPPLS 8
T ARPP+S
Sbjct: 130 TTARPPIS 137


>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AARPPLSNP 10
RPPL P
Sbjct: 213 GGRPPLGTP 221




116|SequenceR|585|576|PPRTPTAARP

>sp|PTH_PYRAE|PEPTIDYL-TRNA hydrolase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPRTPTA 7
PP TPTA
Sbjct: 92 PPGTPTA 98


>sp|ACDG_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit gamma|Archaeoglobus fulgidus

Query: 2 PRTPTAARP 10
PRTP P
Sbjct: 337 PRTPVQVEP 345




117|SequenceR|590|581|SPPRSPPRTP

>sp|OTC_METMJ|ORNITHINE carbamoyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SPPRSPPR 8
SPPR PR
Sbjct: 181 SPPRYRPR 188


>sp|SRP54_AERPE|SIGNAL recognition particle 54 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPRSPPRTP 10
P PP+TP
Sbjct: 88 PQVDPPKTP 96


>sp|DNAG_THEAC|DNA primase DnaG|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PPRSPPR 8
PP PP+
Sbjct: 324 PPEQPPK 330


>sp|HEM3_CALMQ|PROBABLE porphobilinogen deaminase|Caldivirga maquilingensis (strain ATCC

Query: 1 SPPRSPPR 8
+PPR PR
Sbjct: 95 TPPRDNPR 102


>sp|HEM3_HYPBU|PROBABLE porphobilinogen deaminase|Hyperthermus butylicus (strain DSM 5456

Query: 1 SPPRSPP 7
+PPR PP
Sbjct: 95 TPPRDPP 101


>sp|GATE_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus kodakarensis (strain ATCC

Query: 2 PPRSPPR 8
PPR P R
Sbjct: 89 PPRGPDR 95


>sp|GATE_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus abyssi (strain GE5 /

Query: 2 PPRSPPR 8
PPR P R
Sbjct: 92 PPRGPDR 98




118|SequenceR|595|586|PRSPRSPPRS

>sp|XERA_PYRHO|TYROSINE recombinase XerA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PRSPRSPPRS 10
P+ P+S P+S
Sbjct: 95 PKIPKSLPKS 104


>sp|GPMA_METPE|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 1 PRSPRSPPR 9
PR PR PR
Sbjct: 129 PRHPRFDPR 137


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 PRSPRSPPRS 10
PR R PP S
Sbjct: 579 PREMRPPPHS 588




119|SequenceR|600|591|SPHSPPRSPR

>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SPHSPPRSP 9
SP+ PP SP
Sbjct: 32 SPYDPPNSP 40


>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 PHSPPRS 8
PH PP +
Sbjct: 347 PHDPPEA 353


>sp|DNAG_NATPD|DNA primase DnaG|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SPHSPPRSP 9
SP SP SP
Sbjct: 316 SPESPAESP 324




120|SequenceR|605|596|PSGHASPHSP

>sp|GVPK1_HALSA|GAS vesicle protein K1|Halobacterium salinarum (strain ATCC 700922

Query: 1 PSGHASPHS 9
PSGH SP S
Sbjct: 100 PSGHGSPES 108


>sp|DGGGP_METKA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 PSGHASPHS 9
PSG SP S
Sbjct: 71 PSGRVSPRS 79


>sp|ASSY_METS5|ARGININOSUCCINATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 3 GHASPHSP 10
G SP+SP
Sbjct: 345 GRTSPYSP 352


>sp|RL11_ARCFU|LARGE ribosomal subunit protein uL11|Archaeoglobus fulgidus (strain

Query: 1 PSGHASPHSP 10
P G ASP P
Sbjct: 10 PGGQASPGPP 19




121|SequenceR|610|601|TSVPAPSGHA

>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 1 TSVPAPSGH 9
T P P+GH
Sbjct: 310 THTPVPAGH 318


>sp|PGK_HALVA|PHOSPHOGLYCERATE kinase|Haloarcula vallismortis (Halobacterium vallismortis)

Query: 2 SVPAPSGH 9
+VPA +GH
Sbjct: 229 TVPAAAGH 236


>sp|RS5_METST|SMALL ribosomal subunit protein uS5|Methanosphaera stadtmanae (strain

Query: 1 TSVPAPSG 8
T +PAP+G
Sbjct: 157 TLIPAPAG 164


>sp|PYLS_METBF|PYRROLYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TSVPAPS 7
TS PAPS
Sbjct: 148 TSAPAPS 154


>sp|RS5_PYRIL|SMALL ribosomal subunit protein uS5|Pyrobaculum islandicum (strain DSM

Query: 1 TSVPAPSG 8
T +PAP G
Sbjct: 144 TLIPAPKG 151


>sp|RS5_PYRAE|SMALL ribosomal subunit protein uS5|Pyrobaculum aerophilum (strain ATCC

Query: 1 TSVPAPSG 8
T +PAP G
Sbjct: 160 TLIPAPKG 167


>sp|RS5_METTH|SMALL ribosomal subunit protein uS5|Methanothermobacter

Query: 1 TSVPAPSG 8
T +PAP G
Sbjct: 145 TLIPAPGG 152


>sp|RS5_PYRCJ|SMALL ribosomal subunit protein uS5|Pyrobaculum calidifontis (strain DSM

Query: 1 TSVPAPSG 8
T +PAP G
Sbjct: 144 TLIPAPKG 151


>sp|Y2021_HALSA|PUTATIVE heme-binding protein VNG_2021C|Halobacterium salinarum (strain ATCC

Query: 3 VPAPSGHA 10
VPAP G A
Sbjct: 257 VPAPEGGA 264


>sp|RS5_PYRAR|SMALL ribosomal subunit protein uS5|Pyrobaculum arsenaticum (strain DSM

Query: 1 TSVPAPSG 8
T +PAP G
Sbjct: 144 TLIPAPKG 151


>sp|COFD_METBU|2-PHOSPHO-L-LACTATE transferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TSVPAPSGH 9
T V PSGH
Sbjct: 136 TIVETPSGH 144


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 1 TSVPAPSGH 9
T+ P P GH
Sbjct: 224 TTFPKPVGH 232


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 1 TSVPAPSGH 9
T+ P P GH
Sbjct: 224 TTFPKPVGH 232


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 1 TSVPAPSGH 9
T+ P P GH
Sbjct: 224 TTFPKPVGH 232


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 1 TSVPAPSGH 9
T+ P P GH
Sbjct: 224 TTFPKPVGH 232




122|SequenceR|615|606|MRKPMTSVPA

>sp|Y863_ARCFU|UNCHARACTERIZED protein AF_0863|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RKPMTSVP 9
R P+T+VP
Sbjct: 18 RNPVTAVP 25




123|SequenceR|620|611|PGESSMRKPM

>sp|CBID_METKA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 PGESSMRKP 9
P E+ +RKP
Sbjct: 97 PSEARVRKP 105




124|SequenceR|625|616|PSMRPPGESS

>sp|NEP1_SACS2|RIBOSOMAL RNA small subunit methyltransferase|Saccharolobus solfataricus

Query: 1 PSMRPP 6
P+MRPP
Sbjct: 96 PNMRPP 101


>sp|K6PF_METAC|ADP-SPECIFIC phosphofructokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 MRPPGES 9
++PPGE+
Sbjct: 165 LKPPGEA 171


>sp|GUAA_AERPE|GMP synthase [glutamine-hydrolyzing]|Aeropyrum pernix (strain ATCC

Query: 3 MRPPGES 9
+RPPGE+
Sbjct: 141 LRPPGEA 147




125|SequenceR|630|621|HRQAKPSMRP

>sp|DNLI1_HALWD|DNA ligase 1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HRQAKPSMRP 10
R+ KP+M P
Sbjct: 476 QRKIKPTMEP 485


>sp|MCT_HALHT|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula hispanica (strain ATCC 33960

Query: 1 HRQAKPS 7
HRQ +PS
Sbjct: 138 HRQGQPS 144


>sp|MCT_HALMA|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HRQAKPS 7
HRQ +PS
Sbjct: 138 HRQGQPS 144




126|SequenceR|635|626|RHNRPHRQAK

>sp|KCY_HALMA|CYTIDYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RHNRPHRQAK 10
R N+P QAK
Sbjct: 112 RENKPFEQAK 121


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HNRPHR 7
HN PHR
Sbjct: 60 HNFPHR 65


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 RHNRPHR 7
+HN PH+
Sbjct: 346 KHNIPHK 352




127|SequenceR|640|631|RGASVRHNRP

>sp|KAE1_THEON|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus onnurineus

Query: 1 RGASVRHNRP 10
R +++HN+P
Sbjct: 92 RALAIKHNKP 101


>sp|DIPPS_ARCFU|BIFUNCTIONAL IPC transferase and DIPP|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 VRHNRP 10
VRH+RP
Sbjct: 141 VRHDRP 146


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 RGASVRHN 8
RG SV HN
Sbjct: 272 RGVSVSHN 279


>sp|HEM3_HALSA|PROBABLE porphobilinogen deaminase|Halobacterium salinarum (strain ATCC

Query: 1 RGASVRHNRP 10
RGA V+ +RP
Sbjct: 130 RGAQVQAHRP 139


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 3 ASVRHN 8
AS+RHN
Sbjct: 160 ASIRHN 165




128|SequenceR|645|636|SSISGRGASV

>sp|NUCS_AERPE|ENDONUCLEASE NucS|Aeropyrum pernix (strain ATCC 700893

Query: 1 SSISGRGASV 10
S GRGASV
Sbjct: 44 SEYEGRGASV 53




129|SequenceR|650|641|VFELGSSISG

>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VFELGSSI 8
VF+LGSSI
Sbjct: 1027 VFDLGSSI 1034


>sp|PCNA_METBF|DNA polymerase sliding clamp|Methanosarcina barkeri (strain Fusaro /

Query: 1 VFELGSS 7
+FELGSS
Sbjct: 48 IFELGSS 54


>sp|PCNA_METMA|DNA polymerase sliding clamp|Methanosarcina mazei (strain ATCC

Query: 1 VFELGSS 7
+FELGSS
Sbjct: 48 IFELGSS 54


>sp|PCNA_METAC|DNA polymerase sliding clamp|Methanosarcina acetivorans (strain ATCC

Query: 1 VFELGSS 7
+FELGSS
Sbjct: 48 IFELGSS 54




130|SequenceR|655|646|PPNHSVFELG

>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 PPNHSVFELG 10
PP HS+F +G
Sbjct: 584 PPPHSLFPIG 593


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 1 PPNHSVFELG 10
PP H V+E G
Sbjct: 748 PPAHWVYERG 757


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 1 PPNHSVFE 8
PP+H+V E
Sbjct: 267 PPDHTVHE 274


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 1 PPNHSVFE 8
PP+H+V E
Sbjct: 267 PPDHTVHE 274


>sp|RADA_CENSY|DNA repair and recombination protein|Cenarchaeum symbiosum (strain A)

Query: 1 PPNHSVFELG 10
P + +VFELG
Sbjct: 305 PASEAVFELG 314


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PPNHSVF 7
PP+H+V+
Sbjct: 377 PPSHTVY 383


>sp|SYE_NITMS|GLUTAMATE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 PNHSVFELG 10
PNH + +LG
Sbjct: 431 PNHPINDLG 439


>sp|DNAJ_METTE|CHAPERONE protein DnaJ|Methanosarcina thermophila

Query: 2 PNHSVFEL 9
P HSVF++
Sbjct: 301 PTHSVFKI 308


>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 2 PNHSVFELG 10
P H++FE G
Sbjct: 360 PQHTIFESG 368


>sp|GLMU_METVS|BIFUNCTIONAL protein GlmU|Methanococcus vannielii (strain ATCC 35089

Query: 1 PPNHSVFELG 10
P N V ELG
Sbjct: 126 PENFGVIELG 135


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 HSVFELG 10
H V+ELG
Sbjct: 63 HEVYELG 69


>sp|GLMU_METMP|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain DSM 14266

Query: 1 PPNHSVFELG 10
P N V ELG
Sbjct: 126 PENFGVIELG 135




131|SequenceR|660|651|TAAESPPNHS

>sp|LEU1_ARCFU|PROBABLE 2-isopropylmalate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 1 TAAESPPNH 9
T + PPNH
Sbjct: 269 TGVKMPPNH 277


>sp|DP2S_HALSA|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 1 TAAESPPNH 9
+A ++PPNH
Sbjct: 90 SATDTPPNH 98


>sp|DP2S_HALS3|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 1 TAAESPPNH 9
+A ++PPNH
Sbjct: 90 SATDTPPNH 98


>sp|ECFA_METST|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosphaera stadtmanae

Query: 3 AESPPNH 9
AE PP+H
Sbjct: 134 AEKPPHH 140


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain

Query: 1 TAAESPPN 8
T AESPP+
Sbjct: 14 TTAESPPD 21




132|SequenceR|665|656|RAVPPTAAES

>sp|PFP_THETK|PYROPHOSPHATE--FRUCTOSE 6-phosphate 1-phosphotransferase|Thermoproteus tenax (strain ATCC

Query: 1 RAVPPTA 7
R VPPTA
Sbjct: 266 RGVPPTA 272


>sp|NADK_HALLT|NAD kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 RAVPPTAAE 9
AVPP AAE
Sbjct: 93 NAVPPEAAE 101


>sp|RL11_HALVD|LARGE ribosomal subunit protein uL11|Haloferax volcanii (strain ATCC

Query: 2 AVPPTAA 8
VPPTAA
Sbjct: 67 GVPPTAA 73


>sp|RL11_HALSA|LARGE ribosomal subunit protein uL11|Halobacterium salinarum (strain

Query: 2 AVPPTAA 8
VPPTAA
Sbjct: 67 GVPPTAA 73


>sp|RL11_HALS3|LARGE ribosomal subunit protein uL11|Halobacterium salinarum (strain

Query: 2 AVPPTAA 8
VPPTAA
Sbjct: 67 GVPPTAA 73


>sp|RL11_NATPD|LARGE ribosomal subunit protein uL11|Natronomonas pharaonis (strain

Query: 2 AVPPTAA 8
VPPTAA
Sbjct: 67 GVPPTAA 73




133|SequenceR|670|661|GSPSTRAVPP

>sp|PUS10_ACIS3|TRNA pseudouridine synthase Pus10|Acidilobus saccharovorans (strain DSM

Query: 1 GSPSTRAVPP 10
G P R VPP
Sbjct: 259 GGPRVRLVPP 268


>sp|HUTI_THEAC|IMIDAZOLONEPROPIONASE acidophilum (strain ATCC 25905

Query: 5 TRAVPP 10
TRAVPP
Sbjct: 46 TRAVPP 51




134|SequenceR|675|666|SSWTGGSPST

>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 1 SSWTGGSP 8
+ W GGSP
Sbjct: 321 AKWIGGSP 328


>sp|SUCC_PYRCJ|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum calidifontis (strain

Query: 2 SWTGGSPST 10
SW G SP T
Sbjct: 157 SWLGFSPGT 165


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 WTGGSP 8
W GGSP
Sbjct: 240 WQGGSP 245


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 SWTGGSP 8
SWT G P
Sbjct: 190 SWTPGEP 196


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 SWTGGSP 8
SWT G P
Sbjct: 190 SWTPGEP 196


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SWTGGSP 8
SWT G P
Sbjct: 190 SWTPGEP 196


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 SWTGGSP 8
SWT G P
Sbjct: 192 SWTPGEP 198


>sp|IDI2_ARCFU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SSWTGGSPST 10
+S TGG P T
Sbjct: 62 ASMTGGHPET 71


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 1 SSWTGGSPS 9
+SW G PS
Sbjct: 38 NSWVKGKPS 46


>sp|QUEE_THEKO|7-CARBOXY-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SWTGGSPS 9
S+TGG P+
Sbjct: 96 SYTGGEPT 103


>sp|AROE_METVS|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus vannielii (strain ATCC 35089

Query: 3 WTGGSPST 10
WTG P T
Sbjct: 264 WTGFKPDT 271


>sp|LONB_HALSA|ARCHAEAL Lon protease|Halobacterium salinarum (strain ATCC 700922

Query: 1 SSWTGGSPS 9
S TGG+PS
Sbjct: 692 SGTTGGNPS 700


>sp|IDI2_METAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SSWTGGSPST 10
+S TGG P T
Sbjct: 66 ASITGGHPDT 75


>sp|IDI2_METMA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SSWTGGSPST 10
+S TGG P T
Sbjct: 66 ASITGGHPDT 75


>sp|IDI2_METBF|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SSWTGGSPST 10
+S TGG P T
Sbjct: 66 ASITGGHPDT 75




135|SequenceR|680|671|VGSVVSSWTG

>sp|PELO_METHJ|PROTEIN pelota homolog|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 SVVSSWTG 10
SV+ SW+G
Sbjct: 108 SVIKSWSG 115


>sp|Y739_SACI1|MEMO1 family protein YN1551_0739|Saccharolobus islandicus (strain

Query: 1 VGSVVSSW 8
+GS VS+W
Sbjct: 91 LGSYVSAW 98


>sp|Y2219_SACI2|MEMO1 family protein LS215_2219|Saccharolobus islandicus (strain

Query: 1 VGSVVSSW 8
+GS VS+W
Sbjct: 91 LGSYVSAW 98


>sp|Y2180_SACI7|MEMO1 family protein YG5714_2180|Saccharolobus islandicus (strain

Query: 1 VGSVVSSW 8
+GS VS+W
Sbjct: 91 LGSYVSAW 98


>sp|Y2134_SACI3|MEMO1 family protein M1627_2134|Saccharolobus islandicus (strain

Query: 1 VGSVVSSW 8
+GS VS+W
Sbjct: 91 LGSYVSAW 98


>sp|Y2061_SACI6|MEMO1 family protein M164_2061|Saccharolobus islandicus (strain M.16.4

Query: 1 VGSVVSSW 8
+GS VS+W
Sbjct: 91 LGSYVSAW 98


>sp|Y2054_SACI4|MEMO1 family protein M1425_2054|Saccharolobus islandicus (strain

Query: 1 VGSVVSSW 8
+GS VS+W
Sbjct: 91 LGSYVSAW 98


>sp|Y066_SACS2|MEMO1 family protein SSO0066|Saccharolobus solfataricus (strain ATCC

Query: 1 VGSVVSSW 8
+GS VS+W
Sbjct: 91 LGSYVSAW 98




136|SequenceR|685|676|PSLRPVGSVV

>sp|Y282_METJA|UNCHARACTERIZED protein MJ0282|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PSLRPVGSVV 10
P L+P G+VV
Sbjct: 117 PDLKPKGAVV 126


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PSLRPVGSVV 10
PSLRP+ + V
Sbjct: 145 PSLRPLRNAV 154


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LRPVGSVV 10
+RP+G+V+
Sbjct: 425 MRPIGNVI 432


>sp|CARA_THEAC|CARBAMOYL phosphate synthase small chain|Thermoplasma acidophilum (strain

Query: 1 PSLRPV 6
PSLRPV
Sbjct: 220 PSLRPV 225


>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 1 PSLRPVGSVV 10
P LRPV + +
Sbjct: 525 PKLRPVDTAI 534


>sp|PSB1_DESA1|PROTEASOME subunit beta 1|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 LRPVGSVV 10
L PVGSV+
Sbjct: 121 LDPVGSVI 128




137|SequenceR|690|681|PRHTKPSLRP

>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PRHTKPSLR 9
PRH PSLR
Sbjct: 250 PRHPNPSLR 258


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 PRHTKP 6
PRHT P
Sbjct: 161 PRHTHP 166


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 3 HTKPSLRP 10
+T+P LRP
Sbjct: 206 YTEPGLRP 213


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 PRHTKPSLR 9
PRH PS+R
Sbjct: 241 PRHPDPSVR 249


>sp|Y1629_ARCFU|UNCHARACTERIZED protein AF_1629|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PRHTKPSL 8
P+H KP L
Sbjct: 168 PKHLKPLL 175


>sp|GPMA_METMA|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RHTKPSLRP 10
RH +P L+P
Sbjct: 11 RHGEPGLKP 19




138|SequenceR|695|686|QRPSRPRHTK

>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 3 PSRPRH 8
PSRPRH
Sbjct: 219 PSRPRH 224


>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 RPSRPR 7
RP+RPR
Sbjct: 510 RPTRPR 515




139|SequenceR|700|691|NGISNQRPSR

>sp|Y1725_METS5|PUTATIVE HTH-type transcriptional regulatory protein|Metallosphaera sedula

Query: 3 ISNQRPSR 10
ISN RPS+
Sbjct: 48 ISNDRPSK 55


>sp|HERA_PYRFU|DNA double-strand break repair helicase|Pyrococcus furiosus (strain

Query: 2 GISNQRPSR 10
G+ +QRPS+
Sbjct: 436 GVVSQRPSK 444


>sp|AROA_METM6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 NGISNQRPSR 10
NGI N PS+
Sbjct: 11 NGILNAPPSK 20


>sp|RL34_PYRNV|LARGE ribosomal subunit protein eL34|Pyrobaculum neutrophilum (strain

Query: 2 GISNQRPSR 10
G+SN+ P+R
Sbjct: 55 GVSNRAPTR 63




140|SequenceR|705|696|PGSPTNGISN

>sp|GCH3_METST|GTP cyclohydrolase III|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 SPTNGIS 9
+PTNGIS
Sbjct: 188 APTNGIS 194


>sp|CDC65_HALSA|ORC1-TYPE DNA replication protein 5|Halobacterium salinarum (strain ATCC

Query: 1 PGSPTNGIS 9
PG P G+S
Sbjct: 118 PGVPETGVS 126


>sp|LEUC2_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 1 PGSPTNGIS 9
P SP NG+S
Sbjct: 237 PFSPANGVS 245


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGSPTN 6
PG PTN
Sbjct: 367 PGEPTN 372


>sp|TOP6A_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PTNGISN 10
PT G+SN
Sbjct: 45 PTRGLSN 51


>sp|RL3_SACS2|LARGE ribosomal subunit protein uL3|Saccharolobus solfataricus (strain

Query: 1 PGSPTNG 7
P SPTNG
Sbjct: 62 PNSPTNG 68


>sp|RL3_SACI7|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 PGSPTNG 7
P SPTNG
Sbjct: 62 PNSPTNG 68


>sp|RL3_SACI6|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 PGSPTNG 7
P SPTNG
Sbjct: 62 PNSPTNG 68


>sp|RL3_SACI4|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 PGSPTNG 7
P SPTNG
Sbjct: 62 PNSPTNG 68


>sp|RL3_SACI3|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 PGSPTNG 7
P SPTNG
Sbjct: 62 PNSPTNG 68


>sp|RL3_SACI2|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 PGSPTNG 7
P SPTNG
Sbjct: 62 PNSPTNG 68


>sp|RL3_SACI1|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 PGSPTNG 7
P SPTNG
Sbjct: 62 PNSPTNG 68


>sp|RUBR_PYRAB|RUBREDOXIN abyssi (strain GE5 /

Query: 2 GSPTNGIS 9
G P NGIS
Sbjct: 18 GDPDNGIS 25


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC

Query: 1 PGSPTNG 7
PG PT+G
Sbjct: 62 PGRPTSG 68


>sp|RUBR_PYRFU|RUBREDOXIN furiosus (strain ATCC 43587

Query: 2 GSPTNGIS 9
G P NGIS
Sbjct: 18 GDPDNGIS 25




141|SequenceR|710|701|PSALVPGSPT

>sp|AMPD_METMA|ANHYDROMEVALONATE phosphate decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LVPGSPT 10
LVPGSPT
Sbjct: 87 LVPGSPT 93


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 LVPGSP 9
L+PGSP
Sbjct: 544 LIPGSP 549


>sp|GGGPS_THEPD|GERANYLGERANYLGLYCERYL phosphate synthase|Thermofilum pendens (strain DSM 2475

Query: 1 PSALVPGSPT 10
P L PGSPT
Sbjct: 76 PVILFPGSPT 85


>sp|LIVM_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 1 PSALVPGSP 9
PS L+P P
Sbjct: 321 PSGLIPEKP 329


>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 PSALVPGSP 9
PS +P SP
Sbjct: 264 PSVAIPNSP 272


>sp|KAD6_PYRAE|PUTATIVE adenylate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PSALVPGSP 9
P AL+ G+P
Sbjct: 7 PKALITGTP 15


>sp|KADA_SULAC|ADENYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PSALVPGSPT 10
PS +PG P+
Sbjct: 99 PSGYLPGLPS 108


>sp|HTPX_AERPE|PROTEASE HtpX homolog|Aeropyrum pernix (strain ATCC 700893

Query: 2 SALVPGSP 9
SALV GSP
Sbjct: 217 SALVTGSP 224


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 PSALVPGSP 9
P ALVP +P
Sbjct: 869 PQALVPNNP 877


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 1 PSALVPGSPT 10
PSAL PG T
Sbjct: 187 PSALYPGGYT 196


>sp|GGGPS_PYRCJ|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PSALVPGSPT 10
P L PGSP+
Sbjct: 68 PVVLFPGSPS 77


>sp|PURQ_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PSALVPGSP 9
P AL+P P
Sbjct: 98 PGALIPNDP 106


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 5 VPGSPT 10
VPG+PT
Sbjct: 93 VPGNPT 98




142|SequenceR|715|706|IIGAQPSALV

>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 2 IGAQPSALV 10
+GAQP ALV
Sbjct: 128 MGAQPVALV 136


Query: 1 IIGAQPSALV 10
+ GA+P A+V
Sbjct: 500 VTGAEPDAIV 509


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 2 IGAQPSALV 10
+GAQP ALV
Sbjct: 135 MGAQPIALV 143


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IGAQPSALV 10
+GAQP AL+
Sbjct: 135 MGAQPVALI 143


>sp|PUR5_METMP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 IGAQPSALV 10
IGA+P ALV
Sbjct: 91 IGAEPVALV 99


>sp|PUR5_METM5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C5 /

Query: 2 IGAQPSALV 10
IGA+P ALV
Sbjct: 91 IGAEPVALV 99


>sp|PUR5_METM7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C7 /

Query: 2 IGAQPSALV 10
IGA+P ALV
Sbjct: 91 IGAEPVALV 99


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IGAQPSALV 10
+GAQP AL+
Sbjct: 144 MGAQPIALI 152


>sp|PUR5_METM6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C6 /

Query: 2 IGAQPSALV 10
IGA+P ALV
Sbjct: 91 IGAEPVALV 99


>sp|PUR5_METVS|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 IGAQPSALV 10
IGA+P ALV
Sbjct: 91 IGAEPVALV 99


>sp|TRPE2_HALMA|ANTHRANILATE synthase component 1 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 IIGAQPSALV 10
I+GA P LV
Sbjct: 311 IVGASPETLV 320


>sp|PUR5_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGAQPSALV 10
IGA+P ALV
Sbjct: 90 IGAEPIALV 98


>sp|PUR5_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IGAQPSALV 10
+GA+P ALV
Sbjct: 94 VGAEPVALV 102


>sp|PUR5_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 IGAQPSALV 10
+GA+P+ALV
Sbjct: 90 VGARPAALV 98


>sp|PUR5_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 IGAQPSALV 10
+GA+P ALV
Sbjct: 90 VGAEPIALV 98


>sp|THI4_THEKO|THIAMINE thiazole synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IIGAQPSALV 10
I+GA PS +V
Sbjct: 28 IVGAGPSGMV 37


>sp|PUR5_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IGAQPSALV 10
+GA+P ALV
Sbjct: 95 VGAEPVALV 103


>sp|PUR5_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 IGAQPSALV 10
+GA+P ALV
Sbjct: 94 VGAEPLALV 102


>sp|IF2P_HALSA|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 1 IIGAQPSALV 10
++GAQP +V
Sbjct: 273 VVGAQPEPIV 282


>sp|IF2P_HALS3|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 1 IIGAQPSALV 10
++GAQP +V
Sbjct: 273 VVGAQPEPIV 282


>sp|PUR5_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IGAQPSALV 10
+GA+P ALV
Sbjct: 94 VGAEPIALV 102


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 2 IGAQPSALV 10
+GA+P ALV
Sbjct: 462 VGAEPLALV 470


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 2 IGAQPSALV 10
+GA+P ALV
Sbjct: 461 VGAEPLALV 469


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IGAQPSALV 10
+GA+P ALV
Sbjct: 462 VGAKPLALV 470


>sp|PURL_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus abyssi (strain GE5 /

Query: 2 IGAQPSALV 10
+GA+P ALV
Sbjct: 462 VGAKPLALV 470


>sp|PUR5_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IGAQPSALV 10
+GA+P ALV
Sbjct: 90 VGAKPVALV 98


>sp|PUR5_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 IGAQPSALV 10
+GA+P ALV
Sbjct: 95 VGAEPIALV 103


>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IGAQPSALV 10
+GA+P ALV
Sbjct: 462 VGAKPLALV 470


>sp|THI4_PYRFU|THIAMINE thiazole synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IIGAQPSALV 10
I+GA PS +V
Sbjct: 29 IVGAGPSGMV 38


>sp|THI4_PYRAB|THIAMINE thiazole synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 IIGAQPSALV 10
I+GA PS +V
Sbjct: 29 IVGAGPSGMV 38


>sp|THI4_PYRHO|THIAMINE thiazole synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IIGAQPSALV 10
I+GA PS +V
Sbjct: 29 IVGAGPSGMV 38


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 2 IGAQPSALV 10
+GA+P ALV
Sbjct: 462 VGARPLALV 470


>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 1 IIGAQPSALV 10
++GA P LV
Sbjct: 309 VVGASPETLV 318


>sp|TRPE1_HALSA|ANTHRANILATE synthase component 1 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 IIGAQPSALV 10
++GA P LV
Sbjct: 310 VVGASPETLV 319


>sp|THI4_HALWD|THIAMINE thiazole synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IIGAQPSALV 10
I+G PS LV
Sbjct: 36 IVGGGPSGLV 45


>sp|THI4_METJA|THIAMINE thiazole synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IIGAQPSAL 9
I+GA PS L
Sbjct: 41 IVGAGPSGL 49


>sp|THI4_PYRAR|THIAMINE thiazole synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 IIGAQPSAL 9
I+GA PS L
Sbjct: 27 IVGAGPSGL 35


>sp|THI4_METS5|THIAMINE thiazole synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 IIGAQPSAL 9
I+GA PS L
Sbjct: 33 IVGAGPSGL 41




143|SequenceR|720|711|VAETPIIGAQ

>sp|ASPGP_PYRFU|PLANT-TYPE L-asparaginase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VAETPIIGA 9
V +TPIIGA
Sbjct: 204 VGDTPIIGA 212


>sp|ASPGP_PYRAB|PLANT-TYPE L-asparaginase|Pyrococcus abyssi (strain GE5 /

Query: 1 VAETPIIGA 9
V +TPIIGA
Sbjct: 203 VGDTPIIGA 211


>sp|ASPGP_PYRHO|PLANT-TYPE L-asparaginase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VAETPIIGA 9
V +TPIIGA
Sbjct: 203 VGDTPIIGA 211


>sp|PYRB_PYRIL|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum islandicum

Query: 1 VAETPIIGA 9
VAE+P+I A
Sbjct: 117 VAESPVINA 125


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 ETPIIGA 9
E PIIGA
Sbjct: 286 EVPIIGA 292


>sp|ASPGP_THEKO|PLANT-TYPE L-asparaginase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VAETPIIGA 9
V +TPIIG
Sbjct: 204 VGDTPIIGG 212


>sp|PYRB_THEPD|ASPARTATE carbamoyltransferase catalytic subunit|Thermofilum pendens (strain

Query: 1 VAETPIIGA 9
VAE P+I A
Sbjct: 127 VAEKPVINA 135


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ETPIIGA 9
E+PIIGA
Sbjct: 324 ESPIIGA 330


>sp|AROD_PYRAE|3-DEHYDROQUINATE dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 AETPIIG 8
AE+PIIG
Sbjct: 97 AESPIIG 103


>sp|PYRB_THEGJ|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus gammatolerans

Query: 1 VAETPIIGA 9
VAE P+I A
Sbjct: 120 VAEVPVINA 128


>sp|PYRB_PYRAB|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus abyssi (strain

Query: 1 VAETPIIGA 9
VAE P+I A
Sbjct: 120 VAEVPVINA 128


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 ETPIIGAQ 10
ETP+IG +
Sbjct: 66 ETPVIGPE 73


>sp|PYRB_THEON|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus onnurineus

Query: 1 VAETPIIGA 9
VAE P+I A
Sbjct: 120 VAEIPVINA 128


>sp|FLAA_METVO|FLAGELLIN A|Methanococcus voltae

Query: 2 AETPIIG 8
AE+P+IG
Sbjct: 159 AESPVIG 165


>sp|PYRB_PYRFU|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus furiosus (strain

Query: 1 VAETPIIGA 9
VAE P+I A
Sbjct: 120 VAEIPVINA 128


>sp|Y2106_PYRCJ|UPF0179 protein Pcal_2106|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VAETPIIG 8
V ETPI+G
Sbjct: 72 VEETPIVG 79




144|SequenceR|725|716|PIPMAVAETP

>sp|GAD_SACS2|D-GLUCONATE/D-GALACTONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PIPMAVAETP 10
PIP+ V E P
Sbjct: 373 PIPLDVIEEP 382




145|SequenceR|730|721|TPSAAPIPMA

>sp|TRPE_SACS2|ANTHRANILATE synthase component 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TPSAAPIPMA 10
T S AP PMA
Sbjct: 333 TVSGAPKPMA 342




146|SequenceR|735|726|APSAPTPSAA

>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PSAPTP 7
PS+PTP
Sbjct: 50 PSSPTP 55


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 PSAPTP 7
PS+PTP
Sbjct: 50 PSSPTP 55


>sp|BACR2_HALMA|BACTERIORHODOPSIN-II marismortui (strain ATCC 43049

Query: 3 SAPTPSA 9
SAPTPSA
Sbjct: 240 SAPTPSA 246


>sp|BACR1_HALWD|BACTERIORHODOPSIN-I walsbyi (strain DSM 16790

Query: 3 SAPTPSA 9
S PTPSA
Sbjct: 242 SEPTPSA 248


>sp|BACR1_HALWC|BACTERIORHODOPSIN-I walsbyi (strain DSM 16854

Query: 3 SAPTPSA 9
S PTPSA
Sbjct: 242 SEPTPSA 248




147|SequenceR|740|731|VARNSAPSAP

>sp|HEM11_PYRCJ|GLUTAMYL-TRNA reductase 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VARNSAPSAP 10
V RN+AP+ P
Sbjct: 255 VPRNTAPNLP 264




148|SequenceR|745|736|ESSPTVARNS

>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ESSPTVARN 9
E PT+ARN
Sbjct: 588 EVGPTIARN 596




149|SequenceR|750|741|RSDKAESSPT

>sp|RS11_METST|SMALL ribosomal subunit protein uS11|Methanosphaera stadtmanae (strain

Query: 1 RSDKAESSP 9
RSD+ ESSP
Sbjct: 42 RSDRQESSP 50


>sp|RS11_METTH|SMALL ribosomal subunit protein uS11|Methanothermobacter

Query: 1 RSDKAESSP 9
R+D+ ESSP
Sbjct: 42 RADRQESSP 50




150|SequenceR|755|746|RQDQLRSDKA

***** No hits found ******


151|SequenceR|760|751|APSNQRQDQL

>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 1 APSNQRQDQL 10
AP+ +R+D+L
Sbjct: 423 APTEKRRDEL 432


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 APSNQRQDQL 10
AP N QDQ+
Sbjct: 222 APENAPQDQV 231


>sp|MIG_METTF|THYMINE/URACIL-DNA glycosylase|Methanothermobacter thermautotrophicus

Query: 3 SNQRQDQL 10
SNQR +QL
Sbjct: 88 SNQRAEQL 95




152|SequenceR|765|756|NEKNGAPSNQ

>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NEKNGAPSN 9
+EK G PSN
Sbjct: 554 SEKTGIPSN 562


>sp|HIS7_METAR|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanocella arvoryzae (strain DSM 22066

Query: 1 NEKNGAPSNQ 10
NE+ G PS +
Sbjct: 180 NERRGIPSTK 189


>sp|HEM1_METAR|GLUTAMYL-TRNA reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 EKNGAPSNQ 10
E NG P N+
Sbjct: 412 ESNGIPGNK 420




153|SequenceR|770|761|ENPKINEKNG

>sp|MAP2_METTH|METHIONINE aminopeptidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 PKINEKN 9
P INE+N
Sbjct: 172 PNINERN 178


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 NPKINEK 8
NPKINE+
Sbjct: 85 NPKINEE 91


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 NPKINEK 8
NPKINE+
Sbjct: 85 NPKINEE 91


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 NPKINEK 8
NPKINE+
Sbjct: 85 NPKINEE 91


>sp|Y967_METTH|PUTATIVE HTH-type transcriptional regulatory protein|Methanothermobacter

Query: 1 ENPKINE 7
+NP+INE
Sbjct: 272 DNPRINE 278


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 2 NPKINEK 8
NPKINE+
Sbjct: 85 NPKINEE 91


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 NPKINEK 8
NPKINE+
Sbjct: 85 NPKINEE 91


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 NPKINEK 8
NPKINE+
Sbjct: 85 NPKINEE 91


>sp|CHEA_HALS3|CHEMOTAXIS protein CheA|Halobacterium salinarum (strain ATCC 29341

Query: 1 ENPKINEKNG 10
E P + E NG
Sbjct: 416 EKPAVREDNG 425




154|SequenceR|775|766|FSPSTENPKI

>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 1 FSPSTENPK 9
F PS E+PK
Sbjct: 170 FRPSLEDPK 178


>sp|VHCG_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit G|Archaeoglobus profundus (strain

Query: 2 SPSTENP 8
SPST+NP
Sbjct: 119 SPSTDNP 125


>sp|SECY_PYRAB|PROTEIN translocase subunit SecY|Pyrococcus abyssi (strain GE5 /

Query: 1 FSPSTENP 8
F P+T NP
Sbjct: 317 FDPTTGNP 324


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 FSPSTENPKI 10
SP +NPK+
Sbjct: 494 LSPRPDNPKL 503


>sp|RRP4_ARCFU|EXOSOME complex component Rrp4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FSPSTENPKI 10
F P +ENP++
Sbjct: 84 FLPVSENPEM 93


>sp|Y086_METJA|UNCHARACTERIZED protein MJ0086|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSPSTENPKI 10
++P +NPKI
Sbjct: 245 YNPGGKNPKI 254




155|SequenceR|780|771|NEAKSFSPST

>sp|DGGGP_METJA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NEAKSFS 7
NEAK FS
Sbjct: 87 NEAKKFS 93


>sp|HIS8_THEKO|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NEAKSFSP 8
NE K+F P
Sbjct: 4 NEVKAFKP 11


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 1 NEAKSFSPST 10
N ++SF PST
Sbjct: 906 NFSRSFLPST 915




156|SequenceR|785|776|PSIGKNEAKS

>sp|RS4E_SULAC|SMALL ribosomal subunit protein eS4|Sulfolobus acidocaldarius (strain

Query: 2 SIGKNEAKS 10
+IG+NEA S
Sbjct: 230 AIGENEADS 238


>sp|CAPPA_PYRFU|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PSIGKNEAK 9
PS+ K EAK
Sbjct: 89 PSVEKEEAK 97


>sp|LADH_META3|LACTALDEHYDE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PSIGKNEAK 9
PS+ +NE K
Sbjct: 28 PSLSRNETK 36




157|SequenceR|790|781|HESVVPSIGK

>sp|GVPC2_HALSA|GAS vesicle protein C2|Halobacterium salinarum (strain ATCC 700922

Query: 1 HESVVPSI 8
HES VP++
Sbjct: 166 HESAVPAL 173


>sp|PROA_HALWD|GAMMA-GLUTAMYL phosphate reductase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HESVVPS 7
HESV PS
Sbjct: 272 HESVAPS 278


>sp|ARGC_ARCFU|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HESVVP 6
HES+VP
Sbjct: 190 HESIVP 195




158|SequenceR|795|786|DIQKRHESVV

>sp|DHYS1_METMA|PROBABLE deoxyhypusine synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DIQKRHESV 9
DIQ RHE +
Sbjct: 117 DIQLRHECI 125


>sp|DHYS_METTE|PROBABLE deoxyhypusine synthase|Methanosarcina thermophila

Query: 1 DIQKRHESV 9
DIQ RHE +
Sbjct: 117 DIQLRHECI 125


>sp|DHYS1_METAC|PROBABLE deoxyhypusine synthase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 DIQKRHESV 9
DIQ RHE +
Sbjct: 117 DIQLRHECI 125


>sp|SYR_METM7|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 IQKRHESVV 10
++KRHE V+
Sbjct: 107 LEKRHEKVI 115


>sp|UDGA_PYRAE|TYPE-4 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DIQKRHESV 9
D+QK HE +
Sbjct: 2 DLQKLHELI 10


>sp|AATE_METAC|A-TYPE ATP synthase subunit E|Methanosarcina acetivorans (strain ATCC

Query: 1 DIQKRHESVV 10
D+QK H+ V+
Sbjct: 54 DLQKLHQQVI 63




159|SequenceR|800|791|FKKLDDIQKR

>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 KKLDDIQKR 10
KK+D+I+KR
Sbjct: 522 KKIDEIEKR 530


>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 1 FKKLDDIQ 8
FKK+ DIQ
Sbjct: 24 FKKVKDIQ 31


>sp|HIS6_METHJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanospirillum hungatei

Query: 2 KKLDDIQK 9
+ LDD+QK
Sbjct: 85 RTLDDVQK 92


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 3 KLDDIQKR 10
++DDI+KR
Sbjct: 9 EMDDIRKR 16


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 3 KLDDIQKR 10
++DDI+KR
Sbjct: 9 EMDDIRKR 16


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 3 KLDDIQKR 10
++DDI+KR
Sbjct: 9 EMDDIRKR 16


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14

Query: 3 KLDDIQKR 10
++DDI+KR
Sbjct: 9 EMDDIRKR 16


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 KLDDIQKR 10
++DDI+KR
Sbjct: 9 EMDDIRKR 16


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51

Query: 3 KLDDIQKR 10
++DDI+KR
Sbjct: 9 EMDDIRKR 16


>sp|RL32_METMA|LARGE ribosomal subunit protein eL32|Methanosarcina mazei (strain ATCC

Query: 1 FKKLDDIQKR 10
FKKLDD +R
Sbjct: 30 FKKLDDNWRR 39


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 2 KKLDDIQKR 10
K +DDI+KR
Sbjct: 152 KLIDDIKKR 160


>sp|PEPQ_PYRFU|XAA-PRO dipeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FKKLDDIQK 9
FKK+DD+ K
Sbjct: 111 FKKIDDVIK 119


>sp|PURP_METJA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocaldococcus jannaschii (strain

Query: 1 FKKLDDIQKR 10
+KK +D++KR
Sbjct: 176 YKKAEDLKKR 185


>sp|Y441_PYRIL|DNA-BINDING protein Pisl_0441|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KKLDDIQKR 10
+KL+++QKR
Sbjct: 17 RKLEELQKR 25


>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 1 FKKLDDIQK 9
FKK +D++K
Sbjct: 361 FKKEEDVKK 369




160|SequenceR|805|796|RFDNKFKKLD

>sp|FENR1_SULAC|FERREDOXIN--NADP reductase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DNKFKK 8
DNKFKK
Sbjct: 323 DNKFKK 328


>sp|COBD_THEVO|PROBABLE cobalamin biosynthesis protein CobD|Thermoplasma volcanium

Query: 1 RFDNKFK 7
+FDN+F+
Sbjct: 41 KFDNRFR 47


>sp|Y3516_METJA|UNCHARACTERIZED protein MJECL16|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DNKFKKLD 10
DNKF +LD
Sbjct: 36 DNKFNQLD 43


>sp|PSA_METTE|PROTEASOME subunit alpha|Methanosarcina thermophila

Query: 3 DNKFKKLD 10
D KF+KL+
Sbjct: 218 DKKFRKLE 225




161|SequenceR|810|801|SSPQLRFDNK

>sp|GCH3_SACI2|GTP cyclohydrolase III|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 QLRFDN 9
QLRFDN
Sbjct: 50 QLRFDN 55


>sp|GCH3_SACI1|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 QLRFDN 9
QLRFDN
Sbjct: 50 QLRFDN 55


>sp|GLMU_METM5|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C5 /

Query: 2 SPQLRFDNK 10
+ LRFDNK
Sbjct: 329 TANLRFDNK 337


>sp|GCH3_SACI3|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.27)

Query: 4 QLRFDN 9
QLRFDN
Sbjct: 50 QLRFDN 55


>sp|GCH3_SACI7|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 QLRFDN 9
QLRFDN
Sbjct: 50 QLRFDN 55


>sp|GCH3_SACI6|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.4 /

Query: 4 QLRFDN 9
QLRFDN
Sbjct: 50 QLRFDN 55


>sp|GCH3_SACI4|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.14.25 /

Query: 4 QLRFDN 9
QLRFDN
Sbjct: 50 QLRFDN 55


>sp|Y527_METM7|UPF0200 protein MmarC7_0527|Methanococcus maripaludis (strain C7 /

Query: 1 SSPQLRFD 8
SSP+ RFD
Sbjct: 112 SSPKTRFD 119


>sp|GLMU_META3|BIFUNCTIONAL protein GlmU|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 SPQLRFDNK 10
+ LRFDNK
Sbjct: 329 TANLRFDNK 337


>sp|GCH3_SACS2|GTP cyclohydrolase III|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 QLRFDN 9
QLRFDN
Sbjct: 50 QLRFDN 55


>sp|VAPC3_METJA|RIBONUCLEASE VapC3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SSPQLRFDNK 10
S P+L FD+K
Sbjct: 54 SLPKLNFDDK 63


>sp|Y920_THESM|UPF0200 protein TSIB_0920|Thermococcus sibiricus (strain DSM 12597

Query: 1 SSPQLRFD 8
SSPQ RF+
Sbjct: 114 SSPQKRFE 121




162|SequenceR|815|806|MSESTSSPQL

***** No hits found ******


163|SequenceR|820|811|NLLQDMSEST

>sp|RIFK_HALMA|RIBOFLAVIN kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 NLLQDMSEST 10
+LLQ M+EST
Sbjct: 84 SLLQRMAEST 93




164|SequenceR|825|816|GERNKNLLQD

>sp|AROE_METBF|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 5 KNLLQD 10
KNLLQD
Sbjct: 182 KNLLQD 187


>sp|PORC_METBF|PYRUVATE synthase subunit PorC|Methanosarcina barkeri (strain Fusaro /

Query: 1 GERNKNLLQ 9
GE+N N +Q
Sbjct: 163 GEKNANAIQ 171


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ERNKNLLQD 10
E+ KNLL+D
Sbjct: 300 EKLKNLLRD 308




165|SequenceR|830|821|DRSKEGERNK

>sp|PELO_PYRAR|PROTEIN pelota homolog|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DRSKEGERNK 10
D +KEGER K
Sbjct: 46 DGTKEGERVK 55




166|SequenceR|835|826|KDKILDRSKE

>sp|ARGD_METMA|ACETYLORNITHINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KDKILDRSKE 10
++K+L+RSKE
Sbjct: 306 EEKLLERSKE 315


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KDKILDRSKE 10
++K+L+RSKE
Sbjct: 306 EEKLLERSKE 315


>sp|AATE_CENSY|A-TYPE ATP synthase subunit E|Cenarchaeum symbiosum (strain A)

Query: 2 DKILDRSKE 10
DKILDR+ E
Sbjct: 12 DKILDRTGE 20


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DKILDRSKE 10
DKI++R+KE
Sbjct: 71 DKIINRAKE 79


>sp|THII_AERPE|PROBABLE tRNA sulfurtransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KDKILDRSKE 10
KD+I+++S+E
Sbjct: 322 KDEIVEKSRE 331


>sp|SYC_THEVO|CYSTEINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DKILDRSKE 10
DKI++R+KE
Sbjct: 71 DKIINRAKE 79


>sp|DNAG_SULTO|DNA primase DnaG|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 KILDRSKE 10
KI+DR+KE
Sbjct: 111 KIIDRAKE 118


>sp|HMGCS_METS5|HYDROXYMETHYLGLUTARYL-COA synthase|Metallosphaera sedula (strain ATCC 51363

Query: 2 DKILDRSK 9
DKIL+R K
Sbjct: 310 DKILERQK 317


>sp|Y925_METM7|UNCHARACTERIZED solute-binding protein MmarC7_0925|Methanococcus maripaludis

Query: 1 KDKILDRSKE 10
+DK+ RSKE
Sbjct: 211 EDKVFMRSKE 220


>sp|DNAG_METPE|DNA primase DnaG|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 KILDRSKE 10
KI+DR+KE
Sbjct: 117 KIVDRAKE 124


>sp|RPO11_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo11|Pyrococcus abyssi (strain GE5 /

Query: 3 KILDRSKE 10
KI DR+KE
Sbjct: 77 KIFDRAKE 84


>sp|G1PDH_METB6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoregula boonei (strain DSM 21154

Query: 1 KDKILDRSK 9
K+K+ D+SK
Sbjct: 10 KEKVFDKSK 18




167|SequenceR|840|831|ASPEIKDKIL

>sp|RLME_METTH|RIBOSOMAL RNA large subunit methyltransferase|Methanothermobacter

Query: 3 PEIKDKIL 10
PE+KDKI+
Sbjct: 97 PEVKDKII 104


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SPEIKDKIL 10
SP+IK+KIL
Sbjct: 53 SPKIKEKIL 61


>sp|XYLH_SULAC|XYLOSE/ARABINOSE import permease protein XylH|Sulfolobus acidocaldarius (strain ATCC

Query: 1 ASPEIKDKI 9
+SPE KD+I
Sbjct: 329 SSPEGKDRI 337


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PEIKDKIL 10
PE KDKI+
Sbjct: 204 PEFKDKII 211


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 ASPEIKDKI 9
A PE+KD +
Sbjct: 841 AKPEVKDAV 849


>sp|UPP_METTH|URACIL phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 3 PEIKDKIL 10
PE+ DKIL
Sbjct: 125 PELDDKIL 132


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 1 ASPEIKDKIL 10
SP I+D IL
Sbjct: 984 GSPNIRDAIL 993


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 ASPEIKDKIL 10
SP I+D IL
Sbjct: 981 GSPNIRDAIL 990


>sp|PUR5_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PEIKDKIL 10
PE+KD I+
Sbjct: 2 PEVKDGII 9


>sp|GUAAA_METMP|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 1 ASPEIKDKIL 10
A+PEIK IL
Sbjct: 40 ANPEIKGVIL 49


>sp|HIS8_META3|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ASPEIKDKIL 10
+SP+IK++IL
Sbjct: 49 SSPKIKEEIL 58


>sp|AGOG_PYRAB|N-GLYCOSYLASE/DNA lyase|Pyrococcus abyssi (strain GE5 /

Query: 1 ASPEIKDKI 9
A PE++DK+
Sbjct: 223 APPELRDKL 231


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ASPEIKDKI 9
++PE KDK+
Sbjct: 459 SNPEWKDKV 467


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ASPEIKDKIL 10
A PE KDK L
Sbjct: 183 APPEFKDKWL 192


>sp|FTR_METBU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PEIKDKI 9
P IKDK+
Sbjct: 226 PSIKDKV 232


>sp|EF2_PYRCJ|ELONGATION factor 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ASPEIKDK 8
A PE KDK
Sbjct: 187 APPEFKDK 194


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ASPEIKDK 8
A PE KDK
Sbjct: 187 APPEFKDK 194


>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ASPEIKDK 8
A PE KDK
Sbjct: 187 APPEFKDK 194


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ASPEIKDK 8
A PE KDK
Sbjct: 187 APPEFKDK 194


>sp|FTR_METBF|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PEIKDKI 9
P IKDKI
Sbjct: 226 PSIKDKI 232


>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein MJ0993|Methanocaldococcus

Query: 3 PEIKDKI 9
PEIK+KI
Sbjct: 300 PEIKEKI 306


>sp|OGG1_PICTO|8-OXOGUANINE DNA glycosylase/AP lyase|Picrophilus torridus (strain ATCC 700027

Query: 1 ASPEIKDKIL 10
+S IKDKIL
Sbjct: 3 SSDYIKDKIL 12


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 SPEIKDKIL 10
+ EIKDKI+
Sbjct: 272 NAEIKDKII 280




168|SequenceR|845|836|IFSDKASPEI

>sp|Y004_METJA|UNCHARACTERIZED protein MJ0004|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FSDKASPEI 10
F+DK PE+
Sbjct: 67 FADKIVPEV 75


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 FSDKASPE 9
F +KASPE
Sbjct: 171 FLEKASPE 178


>sp|Y1551_METVS|UPF0285 protein Mevan_1551|Methanococcus vannielii (strain ATCC 35089

Query: 1 IFSDKASPE 9
+FS ASPE
Sbjct: 126 LFSHTASPE 134




169|SequenceR|850|841|SSSNEIFSDK

>sp|PSTB_SACS2|PHOSPHATE import ATP-binding protein PstB|Saccharolobus solfataricus (strain

Query: 1 SSSNEIFS 8
SSNEIF+
Sbjct: 234 GSSNEIFT 241




170|SequenceR|855|846|GSTCNSSSNE

>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 1 GSTCNSSSNE 10
GS CNSSS E
Sbjct: 335 GSACNSSSLE 344


>sp|DNAG_METM6|DNA primase DnaG|Methanococcus maripaludis (strain C6 /

Query: 1 GSTCNSSSN 9
G+TCN + N
Sbjct: 270 GNTCNDTCN 278


>sp|DNAG_METM5|DNA primase DnaG|Methanococcus maripaludis (strain C5 /

Query: 1 GSTCNSSSN 9
G+TCN + N
Sbjct: 270 GNTCNDACN 278


>sp|DNAG_METJA|DNA primase DnaG|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CNSSSNE 10
CN S+NE
Sbjct: 320 CNPSNNE 326




171|SequenceR|860|851|NPKSSGSTCN

>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NPKSSGST 8
NP SSG+T
Sbjct: 270 NPNSSGAT 277


>sp|LONH_METTH|PUTATIVE lon protease homolog|Methanothermobacter thermautotrophicus (strain

Query: 1 NPKSSGST 8
NP+S+GS+
Sbjct: 315 NPQSAGSS 322


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 3 KSSGSTC 9
K SGSTC
Sbjct: 335 KVSGSTC 341


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 3 KSSGSTC 9
K SGSTC
Sbjct: 335 KVSGSTC 341


>sp|TRUA_METBF|TRNA pseudouridine synthase A|Methanosarcina barkeri (strain Fusaro /

Query: 1 NPKSSGSTC 9
+PKS+ TC
Sbjct: 42 SPKSANYTC 50


>sp|GUAAB_METB6|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoregula boonei

Query: 3 KSSGSTC 9
K SG+TC
Sbjct: 115 KKSGATC 121




172|SequenceR|865|856|SISPSNPKSS

>sp|GGGPS_HALMA|GERANYLGERANYLGLYCERYL phosphate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ISPSNPKS 9
I PSNP S
Sbjct: 65 IEPSNPAS 72


>sp|COFD_METKA|2-PHOSPHO-L-LACTATE transferase|Methanopyrus kandleri (strain AV19 /

Query: 2 ISPSNPKSS 10
I PSNP +S
Sbjct: 192 IGPSNPVTS 200


>sp|COFD_METJA|2-PHOSPHO-L-LACTATE transferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ISPSNPKSS 10
I PSNP +S
Sbjct: 197 IGPSNPITS 205


>sp|COFD_ARCFU|2-PHOSPHO-L-LACTATE transferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ISPSNPKSS 10
I PSNP +S
Sbjct: 186 IGPSNPITS 194


>sp|ASPD_METBU|L-ASPARTATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 3 SPSNPKSS 10
+PSNPK+S
Sbjct: 242 APSNPKTS 249


>sp|SAHH_AERPE|ADENOSYLHOMOCYSTEINASE pernix (strain ATCC 700893

Query: 2 ISPSNPKSS 10
++PSNP S+
Sbjct: 74 LAPSNPLST 82


>sp|Y372_PYRAE|UPF0284 protein PAE0372|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SISPSNPK 8
S SP+NPK
Sbjct: 165 SASPNNPK 172


>sp|FWDF_METJA|POLYFERREDOXIN protein FwdF|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SPSNPK 8
+PSNPK
Sbjct: 179 TPSNPK 184


>sp|Y1534_PYRCJ|UPF0284 protein Pcal_1534|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 SISPSNPK 8
S SP+NPK
Sbjct: 165 SASPNNPK 172


>sp|COFD_METB6|2-PHOSPHO-L-LACTATE transferase|Methanoregula boonei (strain DSM 21154

Query: 2 ISPSNPKSS 10
I PSNP +S
Sbjct: 190 IGPSNPITS 198


>sp|COFD_METAC|2-PHOSPHO-L-LACTATE transferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ISPSNPKSS 10
I PSNP +S
Sbjct: 189 IGPSNPITS 197


>sp|COFC_FERPA|2-PHOSPHO-L-LACTATE guanylyltransferase|Ferroglobus placidus (strain DSM 10642

Query: 4 PSNPKS 9
P+NPKS
Sbjct: 9 PTNPKS 14


>sp|ASPD_METMA|L-ASPARTATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SPSNPKSS 10
SP NPK+S
Sbjct: 242 SPENPKTS 249


>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 2 ISPSNPKSS 10
ISP+ P SS
Sbjct: 412 ISPNRPSSS 420


>sp|GLMU_METJA|BIFUNCTIONAL protein GlmU|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PSNPKSS 10
P NPKS+
Sbjct: 147 PENPKSN 153


>sp|COFD_METLZ|2-PHOSPHO-L-LACTATE transferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 ISPSNPKSS 10
I PSNP +S
Sbjct: 193 IGPSNPVTS 201


>sp|COFD_NATPD|2-PHOSPHO-L-LACTATE transferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ISPSNPKSS 10
I PSNP +S
Sbjct: 219 IGPSNPITS 227


>sp|Y2001_METTM|UNCHARACTERIZED protein MTBMA_p00010|Methanothermobacter marburgensis (strain ATCC

Query: 2 ISPSNPKS 9
+ P NPKS
Sbjct: 519 LEPENPKS 526


>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ISPSNPKSS 10
I+P NPK +
Sbjct: 547 INPKNPKEA 555


>sp|IPK_THEAC|ISOPENTENYL phosphate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PSNPKSS 10
P NP+SS
Sbjct: 61 PKNPRSS 67


>sp|Y534_THEGJ|UPF0284 protein TGAM_0534|Thermococcus gammatolerans (strain DSM 15229

Query: 1 SISPSNPKS 9
S SP NP+S
Sbjct: 162 SASPDNPQS 170


>sp|MTRB_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanosarcina barkeri (strain

Query: 1 SISPSNP 7
S+SPSNP
Sbjct: 53 SLSPSNP 59


>sp|COFD_HALSA|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ISPSNPKSS 10
+ PSNP +S
Sbjct: 221 VGPSNPVTS 229


>sp|COFD_HALS3|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ISPSNPKSS 10
+ PSNP +S
Sbjct: 221 VGPSNPVTS 229


>sp|ASPD_METAC|L-ASPARTATE dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SPSNPKSS 10
SP NPK+S
Sbjct: 242 SPENPKTS 249


>sp|COFD_HALMA|2-PHOSPHO-L-LACTATE transferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ISPSNPKSS 10
I PSNP +S
Sbjct: 219 IGPSNPVTS 227


>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SISPSNPK 8
S+ P NPK
Sbjct: 401 SVEPRNPK 408


>sp|Y853_THEKO|UPF0284 protein TK0853|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SISPSNPKS 9
S SP NP+S
Sbjct: 162 SASPENPQS 170


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SISPSNPK 8
S+ P NPK
Sbjct: 401 SVEPKNPK 408


>sp|ASPD_METBF|L-ASPARTATE dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 3 SPSNPKSS 10
SP NPK+S
Sbjct: 242 SPENPKTS 249


>sp|COFD_METBF|2-PHOSPHO-L-LACTATE transferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ISPSNPKSS 10
I PSNP +S
Sbjct: 189 IGPSNPITS 197


>sp|COFD_METHJ|2-PHOSPHO-L-LACTATE transferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ISPSNPKSS 10
I PSNP +S
Sbjct: 190 IGPSNPVTS 198


>sp|COFD_METBU|2-PHOSPHO-L-LACTATE transferase|Methanococcoides burtonii (strain DSM 6242

Query: 2 ISPSNPKSS 10
I PSNP +S
Sbjct: 189 IGPSNPITS 197


>sp|COFD_METMA|2-PHOSPHO-L-LACTATE transferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ISPSNPKSS 10
I PSNP +S
Sbjct: 189 IGPSNPITS 197




173|SequenceR|870|861|SLISPSISPS

>sp|MTXH_METAC|PUTATIVE methyltransferase mtx subunit H|Methanosarcina acetivorans (strain

Query: 2 LISPSISP 9
LI PSI+P
Sbjct: 193 LIDPSITP 200


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 2 LISPSISP 9
LI PSI+P
Sbjct: 193 LIDPSITP 200


>sp|MTXH_METMA|PUTATIVE methyltransferase mtx subunit H|Methanosarcina mazei (strain ATCC

Query: 2 LISPSISP 9
LI PSI+P
Sbjct: 193 LIDPSITP 200




174|SequenceR|875|866|KHETNSLISP

>sp|RS3_STAMF|SMALL ribosomal subunit protein uS3|Staphylothermus marinus (strain ATCC

Query: 1 KHETNSLISP 10
K ETN ISP
Sbjct: 214 KEETNESISP 223


>sp|GCSH_HALMA|PROBABLE glycine cleavage system H|Haloarcula marismortui (strain ATCC 43049

Query: 1 KHETNSLISP 10
K ET+ L+SP
Sbjct: 110 KSETDDLLSP 119


>sp|LADH_METVS|LACTALDEHYDE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 2 HETNSLISP 10
+ +NSLISP
Sbjct: 344 NRSNSLISP 352


>sp|FTHS_HALWD|FORMATE--TETRAHYDROFOLATE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 HETNSLIS 9
H TNSLI+
Sbjct: 295 HGTNSLIA 302


>sp|CAS1_HALVD|CRISPR-ASSOCIATED endonuclease Cas1|Haloferax volcanii (strain ATCC 29605

Query: 2 HETNSLIS 9
+ETN+LIS
Sbjct: 189 NETNALIS 196




175|SequenceR|880|871|VEPGRKHETN

>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VEPGRKH 7
+ PGRKH
Sbjct: 411 ILPGRKH 417


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 VEPGRKH 7
+ PGRKH
Sbjct: 411 ILPGRKH 417


>sp|MCRC_METVO|METHYL-COENZYME M reductase operon protein|Methanococcus voltae

Query: 1 VEPGRKHET 9
+ PGR+H T
Sbjct: 28 LSPGRRHLT 36


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 VEPGRKH 7
+ PGRKH
Sbjct: 411 ILPGRKH 417


>sp|MCRC_METTM|METHYL-COENZYME M reductase I operon|Methanothermobacter marburgensis (strain

Query: 1 VEPGRKHETN 10
+ PGR+H T
Sbjct: 41 MSPGRRHITK 50


>sp|MCRC_METTH|METHYL-COENZYME M reductase I operon|Methanothermobacter thermautotrophicus

Query: 1 VEPGRKHETN 10
+ PGR+H T
Sbjct: 41 MSPGRRHITK 50


>sp|TOP6A_HYPBU|TYPE 2 DNA topoisomerase 6|Hyperthermus butylicus (strain DSM 5456

Query: 2 EPG-RKHETN 10
EPG R+HE N
Sbjct: 116 EPGGRRHEEN 125


>sp|MCRC_METVA|METHYL-COENZYME M reductase operon protein|Methanococcus vannielii

Query: 1 VEPGRKHETN 10
+ PGR+H T
Sbjct: 43 MSPGRRHITK 52


>sp|MCRC_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VEPGRKHET 9
+ PGR+H T
Sbjct: 43 MSPGRRHIT 51


>sp|TRUD_THEGJ|PROBABLE tRNA pseudouridine synthase D|Thermococcus gammatolerans (strain

Query: 2 EPGRKHE 8
EPGR+ E
Sbjct: 368 EPGRRRE 374


>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 PGRKH 7
PGRKH
Sbjct: 413 PGRKH 417


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 1 VEPGRKHETN 10
VEP ++H N
Sbjct: 31 VEPWKRHPVN 40




176|SequenceR|885|876|VGQSTVEPGR

>sp|CYAS_METTP|CYSTEATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 STVEPGR 10
+TVEPGR
Sbjct: 161 TTVEPGR 167


>sp|Y746_HALSA|UPF0229 protein VNG_0746C|Halobacterium salinarum (strain ATCC 700922

Query: 1 VGQSTVEPG 9
VGQ V+PG
Sbjct: 60 VGQGDVDPG 68


>sp|DPCKG_HYPBU|GTP-DEPENDENT dephospho-CoA kinase|Hyperthermus butylicus (strain DSM 5456

Query: 3 QSTVEPG 9
+STVEPG
Sbjct: 94 RSTVEPG 100


>sp|GFCR1_METAC|TRANSCRIPTIONAL regulator GfcR 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GQSTVEPGR 10
GQ V+PG+
Sbjct: 123 GQDVVQPGQ 131


>sp|GFCR1_METBF|TRANSCRIPTIONAL regulator GfcR 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 GQSTVEPGR 10
GQ V+PG+
Sbjct: 123 GQDVVQPGQ 131


>sp|PPS_THEON|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus onnurineus (strain NA1)

Query: 1 VGQSTVEPG 9
+G+ T+EP
Sbjct: 47 IGERTIEPA 55


>sp|PPS_THEKO|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VGQSTVEPG 9
+G+ T+EP
Sbjct: 47 IGERTIEPA 55


>sp|GFCR_METMA|TRANSCRIPTIONAL regulator GfcR|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GQSTVEPGR 10
GQ V+PG+
Sbjct: 123 GQDMVQPGQ 131




177|SequenceR|890|881|PSSTQVGQST

***** No hits found ******


178|SequenceR|895|886|EQKCAPSSTQ

***** No hits found ******


179|SequenceR|900|891|EKDDKEQKCA

>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 3 DDKEQKCA 10
+DK+ KCA
Sbjct: 29 EDKKVKCA 36




180|SequenceR|905|896|ADKKEEKDDK

***** No hits found ******


181|SequenceR|910|901|RVQEAADKKE

>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 1 RVQEAADKKE 10
R+QEAAD E
Sbjct: 641 RMQEAADNLE 650


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RVQEAADKKE 10
R+QEAAD E
Sbjct: 639 RMQEAADNLE 648


>sp|GLYA_HALMA|SERINE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RVQEAAD 7
R+QEAAD
Sbjct: 184 RIQEAAD 190




182|SequenceR|915|906|NLTSKRVQEA

>sp|CFBA_METBF|SIROHYDROCHLORIN cobaltochelatase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NLTSKRVQEA 10
+L KRVQEA
Sbjct: 120 DLVFKRVQEA 129


>sp|CFBA_METAC|SIROHYDROCHLORIN cobaltochelatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NLTSKRVQEA 10
+L KRVQEA
Sbjct: 120 DLVFKRVQEA 129


>sp|DNLI_PYRFU|DNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NLTSKRVQEA 10
NL +K+V+EA
Sbjct: 376 NLITKKVEEA 385


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis (strain

Query: 3 TSKRVQE 9
TSKRV+E
Sbjct: 640 TSKRVEE 646


>sp|MFNA_METMA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina mazei (strain

Query: 2 LTSKRVQEA 10
LTSK V+EA
Sbjct: 313 LTSKIVEEA 321


>sp|GCH3_METJA|GTP cyclohydrolase III|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LTSKRVQEA 10
+T KR+QE+
Sbjct: 67 ITHKRIQES 75




183|SequenceR|920|911|EKANPNLTSK

>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EKANPNLT 8
E+ NPNLT
Sbjct: 453 EEKNPNLT 460


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EKANPNLTSK 10
E+ NPNL+ +
Sbjct: 466 EQKNPNLSDE 475


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EKANPNLT 8
EK NPN T
Sbjct: 290 EKVNPNAT 297


>sp|ADPRH_METOA|PROTEIN-ADP-RIBOSE hydrolase|Methanobrevibacter oralis

Query: 1 EKANPNLTS 9
E AN NLTS
Sbjct: 62 ETANKNLTS 70


>sp|RL18E_METB6|LARGE ribosomal subunit protein eL18|Methanoregula boonei (strain DSM

Query: 1 EKANPNLT 8
EK NP LT
Sbjct: 6 EKTNPRLT 13


>sp|RL18E_METPE|LARGE ribosomal subunit protein eL18|Methanosphaerula palustris (strain

Query: 1 EKANPNLTS 9
+K NP LTS
Sbjct: 6 KKTNPRLTS 14


>sp|HMGCS_METST|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 KANPNLTS 9
+A+PNLT+
Sbjct: 98 RASPNLTA 105


>sp|Y686_METJA|UNCHARACTERIZED protein MJ0686|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKANPNLTSK 10
E+ NPN+T +
Sbjct: 75 EELNPNITLR 84




184|SequenceR|925|916|SRPNFEKANP

>sp|ICMT_METAC|PROTEIN-S-ISOPRENYLCYSTEINE O-methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RPNFEKA 8
RPNFEK+
Sbjct: 38 RPNFEKS 44


>sp|G3P_METBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SRPNFE 6
+RPNFE
Sbjct: 36 TRPNFE 41


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SRPNFE 6
+RPNFE
Sbjct: 34 TRPNFE 39


>sp|CFBE_METJA|COENZYME F(430) synthetase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 RPNFEK 7
+PNFEK
Sbjct: 64 QPNFEK 69


>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 RPNFEKANP 10
+P+F K NP
Sbjct: 39 KPSFGKTNP 47


>sp|PSTB_METST|PHOSPHATE import ATP-binding protein PstB|Methanosphaera stadtmanae (strain

Query: 5 FEKANP 10
F+KANP
Sbjct: 92 FQKANP 97


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PNFEKA 8
PNF+KA
Sbjct: 422 PNFDKA 427


>sp|RL10E_METAR|LARGE ribosomal subunit protein uL16|Methanocella arvoryzae (strain DSM

Query: 1 SRPNFEKA 8
+R NFEKA
Sbjct: 138 NRANFEKA 145




185|SequenceR|930|921|KPQSFSRPNF

>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 1 KPQSFSRPN 9
KP+S RPN
Sbjct: 137 KPKSLPRPN 145


>sp|OFOB1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 1 KPQSFSRPN 9
KP+S RPN
Sbjct: 137 KPKSLPRPN 145


>sp|RS13_METS3|SMALL ribosomal subunit protein uS13|Methanobrevibacter smithii (strain

Query: 2 PQSFSRPNF 10
PQ F+ PN+
Sbjct: 70 PQKFNIPNW 78


>sp|MPTA_AERPE|GTP cyclohydrolase MptA|Aeropyrum pernix (strain ATCC 700893

Query: 3 QSFSRPNF 10
QSFS P F
Sbjct: 197 QSFSAPTF 204


>sp|FTSZ2_ARCFU|CELL division protein FtsZ 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KPQSFSRP 8
K QSFS P
Sbjct: 367 KQQSFSEP 374




186|SequenceR|935|926|PTTSPKPQSF

>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 1 PTTSPKPQSF 10
P PKPQ+F
Sbjct: 89 PNQLPKPQNF 98


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PTTSPK 6
PTTSPK
Sbjct: 945 PTTSPK 950


>sp|BGAL_SACS2|BETA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 PTTSPKPQSF 10
P P+PQ+F
Sbjct: 89 PNPLPRPQNF 98


>sp|Y1393_METJA|UNCHARACTERIZED protein MJ1393|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PTTSPK 6
PTTSPK
Sbjct: 570 PTTSPK 575




187|SequenceR|940|931|PRPSTPTTSP

>sp|RPO1C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus vannielii (strain ATCC

Query: 3 PSTPTTS 9
PSTPT S
Sbjct: 107 PSTPTMS 113


>sp|ASPD_METBU|L-ASPARTATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PRPSTPTTS 9
P PS P TS
Sbjct: 241 PAPSNPKTS 249


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RPSTPTTS 9
RP+TP T+
Sbjct: 643 RPATPATT 650


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 3 PSTPTTS 9
PSTP TS
Sbjct: 145 PSTPATS 151




188|SequenceR|945|936|SPQAQPRPST

>sp|DNAG_THEON|DNA primase DnaG|Thermococcus onnurineus (strain NA1)

Query: 2 PQAQPRPS 9
P QPRPS
Sbjct: 362 PIQQPRPS 369


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 PQAQPRP 8
P A+PRP
Sbjct: 904 PVAEPRP 910


>sp|FAE_METBF|5,6,7,8-TETRAHYDROMETHANOPTERIN hydro-lyase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PQAQPRPST 10
P QP+P+T
Sbjct: 69 PNIQPKPTT 77


>sp|PSTB2_HALSA|PHOSPHATE import ATP-binding protein PstB|Halobacterium salinarum (strain

Query: 1 SPQAQPRPS 9
+PQ++PR S
Sbjct: 4 TPQSEPRRS 12




189|SequenceR|950|941|GVMSPSPQAQ

>sp|PYLB_METAC|3-METHYLORNITHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 MSPSPQAQ 10
M P+PQA+
Sbjct: 336 MEPAPQAE 343


>sp|PRIS_SULAC|DNA primase small subunit PriS|Sulfolobus acidocaldarius (strain ATCC

Query: 2 VMSPSP 7
+MSPSP
Sbjct: 197 IMSPSP 202


>sp|Y778_AERPE|PUTATIVE HTH-type transcriptional regulatory protein|Aeropyrum pernix

Query: 1 GVMSPS 6
GVMSPS
Sbjct: 173 GVMSPS 178




190|SequenceR|955|946|TPQQHGVMSP

>sp|VOLA_HALVD|VOLACTIN volcanii (strain ATCC 29605

Query: 2 PQQHGVMS 9
P QHG++S
Sbjct: 79 PMQHGILS 86


>sp|RS8E_METS5|SMALL ribosomal subunit protein eS8|Metallosphaera sedula (strain ATCC

Query: 2 PQQHGVMS 9
P QHGV++
Sbjct: 115 PGQHGVIN 122


>sp|RS8E_THEON|SMALL ribosomal subunit protein eS8|Thermococcus onnurineus (strain NA1)

Query: 2 PQQHGVMS 9
P QHGV++
Sbjct: 114 PGQHGVVN 121


>sp|RS8E_METHJ|SMALL ribosomal subunit protein eS8|Methanospirillum hungatei JF-1

Query: 2 PQQHGVMS 9
P QHGV++
Sbjct: 113 PGQHGVIN 120


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TPQQHGVMSP 10
TP+ H V +P
Sbjct: 555 TPEWHNVNNP 564


>sp|GVPD2_HALSA|PROTEIN GvpD2|Halobacterium salinarum (strain ATCC 700922

Query: 1 TPQQHGVMS 9
TP +HG +S
Sbjct: 372 TPTEHGTLS 380




191|SequenceR|960|951|QTYVPTPQQH

>sp|IF2G_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 1 QTYVPTPQQ 9
Q Y+PTPQ+
Sbjct: 199 QKYIPTPQR 207


>sp|KMT_SACI5|PROTEIN-LYSINE N-methyltransferase|Saccharolobus islandicus (strain REY15A)

Query: 3 YVPTPQQ 9
YVPTP++
Sbjct: 9 YVPTPEK 15


>sp|IF2G_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7 /

Query: 1 QTYVPTPQQ 9
Q ++PTP++
Sbjct: 196 QEFIPTPER 204


>sp|IF2G_METM5|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C5 /

Query: 1 QTYVPTPQQ 9
Q ++PTP++
Sbjct: 196 QEFIPTPER 204


>sp|IF2G_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 1 QTYVPTPQQ 9
Q ++PTP++
Sbjct: 196 QDFIPTPER 204


>sp|IF2G_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6 /

Query: 1 QTYVPTPQQ 9
Q ++PTP++
Sbjct: 196 QEFIPTPKR 204


>sp|IF2G_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 1 QTYVPTPQQ 9
Q ++PTP++
Sbjct: 196 QEFIPTPKR 204


>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 1 QTYVPTPQ 8
Q Y PTP+
Sbjct: 214 QAYWPTPE 221


>sp|TRM1_PYRNV|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum neutrophilum

Query: 1 QTYVPTPQQH 10
Q Y P PQ++
Sbjct: 12 QFYAPDPQRY 21


>sp|IF2G_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 1 QTYVPTPQQ 9
Q ++PTP++
Sbjct: 196 QDFIPTPKR 204


>sp|AROE_PYRNV|SHIKIMATE dehydrogenase (NADP(+))|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 YVPTPQ 8
Y+PTP+
Sbjct: 203 YIPTPR 208


>sp|AROE_PYRIL|SHIKIMATE dehydrogenase (NADP(+))|Pyrobaculum islandicum (strain DSM 4184

Query: 3 YVPTPQ 8
Y+PTP+
Sbjct: 203 YIPTPR 208


>sp|KPYK_PYRAE|PYRUVATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 TYVPTPQQ 9
TY+P P +
Sbjct: 113 TYIPVPNK 120


>sp|IF2G_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 1 QTYVPTPQ 8
+ Y+PTP+
Sbjct: 194 EKYIPTPE 201


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YVPTPQQ 9
Y+P PQ+
Sbjct: 588 YIPEPQE 594


>sp|FLA1_PYRHO|PROBABLE flagellin PH0546|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QTYVPTPQ 8
QTYV PQ
Sbjct: 121 QTYVALPQ 128




192|SequenceR|965|956|AFCVPQTYVP

>sp|DEOC_PYRIL|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AFCVPQTYVP 10
A+CV YVP
Sbjct: 33 AYCVNPVYVP 42


>sp|DEOC_HALLT|DEOXYRIBOSE-PHOSPHATE aldolase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 CVPQTYVP 10
C+P Y+P
Sbjct: 39 CIPPCYLP 46


>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 VPQTYVP 10
VP+TY P
Sbjct: 348 VPETYTP 354


>sp|QUEC_METMJ|7-CYANO-7-DEAZAGUANINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 VPQTYVP 10
VP TYVP
Sbjct: 92 VPSTYVP 98


>sp|HUTH_THEVO|PROBABLE histidine ammonia-lyase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 CVPQTY 8
C+PQ Y
Sbjct: 281 CIPQVY 286


>sp|HUTH_THEAC|PROBABLE histidine ammonia-lyase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 CVPQTY 8
C+PQ Y
Sbjct: 281 CIPQVY 286


>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 4 VPQTYVP 10
+P+TY P
Sbjct: 348 IPETYTP 354


>sp|QUEC_METHJ|7-CYANO-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 VPQTYVP 10
+P TYVP
Sbjct: 91 IPDTYVP 97


>sp|QUEC_METLZ|7-CYANO-7-DEAZAGUANINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 PQTYVP 10
P TYVP
Sbjct: 93 PNTYVP 98


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VPQTYVP 10
+P TYVP
Sbjct: 538 LPTTYVP 544


>sp|SYY_METLZ|TYROSINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AFCVPQT 7
AFC P+T
Sbjct: 233 AFCPPET 239


>sp|QUEC_METPE|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 VPQTYVP 10
+P TYVP
Sbjct: 91 LPNTYVP 97


>sp|DEOC_PYRAE|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AFCVPQTYVP 10
A+CV Y P
Sbjct: 33 AYCVNPIYAP 42


>sp|DEOC_PYRNV|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 AFCVPQTYVP 10
A+CV Y P
Sbjct: 33 AYCVNPLYAP 42




193|SequenceR|970|961|YMMNPAFCVP

>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MMNPAFCVP 10
++ PA CVP
Sbjct: 123 LIGPAHCVP 131


>sp|Y731_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus (strain

Query: 3 MNPAFCV 9
MNP +C+
Sbjct: 153 MNPDYCI 159


>sp|AROA_THEVO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 MNPAFCVP 10
MNP C P
Sbjct: 290 MNPDLCPP 297


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain

Query: 2 MMNPAFC 8
MM PA C
Sbjct: 4 MMTPAMC 10


>sp|RIFK_NATPD|RIBOFLAVIN kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 PAFCVP 10
PAFC P
Sbjct: 172 PAFCWP 177


>sp|EPPA_METMP|PREPILIN peptidase EppA|Methanococcus maripaludis (strain DSM 14266

Query: 1 YMMNPAFCV 9
Y++NPA+ V
Sbjct: 194 YLLNPAYFV 202




194|SequenceR|975|966|SVPVPYMMNP

>sp|ENO1_METHJ|ENOLASE 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 VPVPYM 7
+PVPYM
Sbjct: 140 LPVPYM 145


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 3 PVPYMM 8
PVPY+M
Sbjct: 1139 PVPYVM 1144


>sp|SYS_METAR|SERINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 VPVPYMMN 9
V PYMMN
Sbjct: 195 VTPPYMMN 202


>sp|SYS_METMJ|SERINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 PYMMN 9
PYMMN
Sbjct: 198 PYMMN 202


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VPVPYMMNP 10
+P+PY +P
Sbjct: 953 IPMPYFSSP 961


>sp|Y2294_THEKO|UPF0128 protein TK2294|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SVPVPYMMNP 10
S+P+PY P
Sbjct: 148 SIPLPYEEYP 157


>sp|SYS_METLZ|SERINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 PYMMN 9
PYMMN
Sbjct: 198 PYMMN 202


>sp|Y832_PYRAB|UPF0128 protein PYRAB08320|Pyrococcus abyssi (strain GE5 /

Query: 1 SVPVPYMMNP 10
S+P+PY P
Sbjct: 148 SIPLPYEEYP 157


>sp|Y1488_PYRFU|UPF0128 protein PF1488|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SVPVPYMMNP 10
S+P+PY P
Sbjct: 148 SIPLPYEEYP 157


>sp|SYT_METST|THREONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 VPVPYMMN 9
+P+PYM++
Sbjct: 601 LPLPYMVS 608


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 1 SVPVPYMM 8
SVPVP+ +
Sbjct: 315 SVPVPFFV 322


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SVPVPYMMNP 10
+VP PY +P
Sbjct: 37 TVPFPYTNSP 46




195|SequenceR|980|971|PQVGPSVPVP

>sp|Y612_METJA|PROBABLE arogenate/prephenate dehydrogenase|Methanocaldococcus jannaschii

Query: 1 PQVGPSVP 8
P GPS P
Sbjct: 122 PMFGPSTP 129


>sp|MTM7_METJA|PUTATIVE type II methyltransferase M.MjaORF1200P|Methanocaldococcus

Query: 2 QVGPSVPV 9
Q+G SVPV
Sbjct: 344 QIGESVPV 351


>sp|HISX_THEKO|HISTIDINOL dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VGPSVPVP 10
+GP PVP
Sbjct: 299 LGPYTPVP 306


>sp|GSA_METMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VGPSVPVP 10
+GP +P+P
Sbjct: 213 IGPVLPLP 220




196|SequenceR|985|976|PIPYLPQVGP

>sp|K6PF_THELI|ADP-SPECIFIC phosphofructokinase|Thermococcus litoralis

Query: 3 PYLPQVG 9
PYLP++G
Sbjct: 213 PYLPEIG 219


>sp|PSB_HALSA|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 1 PIPYLPQVG 9
P PY P+VG
Sbjct: 21 PNPYEPEVG 29


>sp|PSB_HALS3|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 29341

Query: 1 PIPYLPQVG 9
P PY P+VG
Sbjct: 21 PNPYEPEVG 29


>sp|PSB_NATMM|PROTEASOME subunit beta|Natrialba magadii (strain ATCC 43099

Query: 1 PIPYLPQVG 9
P PY P+VG
Sbjct: 21 PNPYEPEVG 29


>sp|RRP4_PYRHO|EXOSOME complex component Rrp4|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PYLPQVG 9
PY+P+VG
Sbjct: 59 PYIPEVG 65


>sp|PSB1_HALTV|PROTEASOME subunit beta 1|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 PIPYLPQVG 9
P PY P++G
Sbjct: 21 PNPYEPEIG 29


>sp|RRP4_PYRFU|EXOSOME complex component Rrp4|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PYLPQVG 9
PY+P+VG
Sbjct: 59 PYIPEVG 65


>sp|CIMA_SULAC|(R)-CITRAMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PIPYLPQVG 9
P PY P VG
Sbjct: 286 PNPYQPYVG 294


>sp|CBIMQ_METLZ|PUTATIVE fused cobalt transport protein|Methanocorpusculum labreanum (strain

Query: 1 PIPYLP 6
P+PYLP
Sbjct: 377 PLPYLP 382


>sp|RRP4_THEKO|EXOSOME complex component Rrp4|Thermococcus kodakarensis (strain ATCC

Query: 3 PYLPQVG 9
PY+P+VG
Sbjct: 59 PYIPEVG 65


>sp|RRP4_PYRAB|EXOSOME complex component Rrp4|Pyrococcus abyssi (strain GE5 /

Query: 3 PYLPQVG 9
PY+P+VG
Sbjct: 59 PYIPEVG 65


>sp|COFH1_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina acetivorans (strain

Query: 1 PIPYLPQVGP 10
P+P++P P
Sbjct: 243 PLPFMPYNNP 252


>sp|COFH1_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina mazei (strain ATCC

Query: 1 PIPYLPQVGP 10
P+P++P P
Sbjct: 243 PLPFMPYNNP 252


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 3 PYLPQVG 9
P+LP++G
Sbjct: 213 PFLPEIG 219


>sp|PSB2_HALTV|PROTEASOME subunit beta 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 PIPYLPQVG 9
P PY P++G
Sbjct: 15 PSPYAPELG 23


>sp|K6PF_THEKO|ADP-SPECIFIC phosphofructokinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PYLPQVG 9
P+LP++G
Sbjct: 213 PFLPEIG 219


>sp|Y1240_METJA|UNCHARACTERIZED protein MJ1240|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PYLPQV 8
PYLP+V
Sbjct: 49 PYLPKV 54


>sp|DAPF_METJA|DIAMINOPIMELATE epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PYLPQV 8
PYLP+V
Sbjct: 157 PYLPKV 162


>sp|PSB1_HALMA|PROTEASOME subunit beta 1|Haloarcula marismortui (strain ATCC 43049

Query: 3 PYLPQVG 9
PY P+VG
Sbjct: 23 PYAPEVG 29


>sp|COFH1_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina barkeri (strain Fusaro

Query: 1 PIPYLPQVGP 10
P+P++P P
Sbjct: 243 PLPFMPYNNP 252


>sp|NFI_IGNH4|ENDONUCLEASE V|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PIPYLP 6
PIPY+P
Sbjct: 70 PIPYVP 75


>sp|DNLJ_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 IPYLPQV 8
IPY+P+V
Sbjct: 423 IPYVPEV 429


>sp|MFNA_METLZ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocorpusculum labreanum

Query: 2 IPYLPQVGP 10
IP+LP P
Sbjct: 200 IPFLPNPAP 208




197|SequenceR|990|981|PMPTMPIPYL

>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PMPTMPIPYL 10
P P+ PIP++
Sbjct: 45 PYPSSPIPHI 54


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PMPTMPIPYL 10
P P+ PIP++
Sbjct: 45 PYPSSPIPHI 54


>sp|G6PI_HALMA|PROBABLE glucose-6-phosphate isomerase|Haloarcula marismortui (strain ATCC

Query: 2 MPTMPIP 8
+PT+P+P
Sbjct: 178 LPTLPVP 184


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 3 PTMPIP 8
PTMP+P
Sbjct: 390 PTMPLP 395


>sp|GATA_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Haloarcula marismortui (strain ATCC

Query: 3 PTMPIP 8
PTMP+P
Sbjct: 353 PTMPVP 358


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PMPTMPIPYL 10
P P+ P P++
Sbjct: 48 PYPSSPTPHI 57


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PMPTMPIPYL 10
P P+ P P++
Sbjct: 48 PYPSSPTPHI 57


>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 3 PTMPIP 8
PTMP P
Sbjct: 127 PTMPYP 132


>sp|GATA_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Natronomonas pharaonis (strain ATCC

Query: 3 PTMPIP 8
PTMP+P
Sbjct: 352 PTMPVP 357


>sp|SYT_METST|THREONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PMPTMPIPYL 10
P +P+PY+
Sbjct: 597 PFRQLPLPYM 606


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 TMPIPYL 10
T+P PYL
Sbjct: 34 TIPYPYL 40


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 3 PTMPIPYL 10
P MP PY+
Sbjct: 425 PLMPSPYV 432


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 PTMPIPYL 10
P MP PY+
Sbjct: 425 PLMPSPYV 432


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PMPTMP 6
PMPT P
Sbjct: 228 PMPTYP 233


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 PTMPIPYL 10
P MP PY+
Sbjct: 425 PLMPSPYV 432


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 TMPIPYL 10
T+P PYL
Sbjct: 37 TIPYPYL 43


>sp|DTDA_METHJ|D-AMINOACYL-TRNA deacylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 MPTMPIPYL 10
MPT IP+L
Sbjct: 208 MPTRDIPHL 216


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 TMPIPYL 10
T+P PYL
Sbjct: 37 TIPYPYL 43


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 TMPIPYL 10
T+P PYL
Sbjct: 38 TIPYPYL 44




198|SequenceR|995|986|KAQNVPMPTM

>sp|Y4342_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 KAQNVPMP 8
+A+NVP+P
Sbjct: 227 EAKNVPLP 234


>sp|RL5_AERPE|LARGE ribosomal subunit protein uL5|Aeropyrum pernix (strain ATCC

Query: 1 KAQNVPMP 8
KAQ++P+P
Sbjct: 4 KAQSLPIP 11




199|SequenceR|1000|991|VARYTKAQNV

>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 1 VARYTKAQN 9
+A+YTK++N
Sbjct: 284 IAKYTKSKN 292


>sp|RL31_PYRFU|LARGE ribosomal subunit protein eL31|Pyrococcus furiosus (strain ATCC

Query: 1 VARYTKAQNV 10
VAR+ KAQ V
Sbjct: 39 VARHAKAQEV 48


>sp|PUR2_METBF|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VARYTKAQNV 10
V Y KA+N+
Sbjct: 57 VVEYAKARNI 66


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 1 VARYTKAQNV 10
V TKAQNV
Sbjct: 10 VLEITKAQNV 19


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4

Query: 1 VARYTKAQNV 10
V TKAQNV
Sbjct: 10 VLEITKAQNV 19


>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 VARYTKAQNV 10
V TKAQNV
Sbjct: 10 VLEITKAQNV 19


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 1 VARYTKAQNV 10
V TKAQNV
Sbjct: 10 VLEITKAQNV 19


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 1 VARYTKAQNV 10
V TKAQNV
Sbjct: 10 VLEITKAQNV 19


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 1 VARYTKAQNV 10
V TKAQNV
Sbjct: 10 VLEITKAQNV 19


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 1 VARYTKAQNV 10
V TKAQNV
Sbjct: 10 VLEITKAQNV 19




200|SequenceR|1005|996|QPMNPVARYT

>sp|NADB_PYRHO|L-ASPARTATE oxidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PMNPVARYT 10
P+ PVA YT
Sbjct: 302 PITPVAHYT 310


>sp|NADB_PYRFU|L-ASPARTATE oxidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PMNPVARYT 10
P+ PVA YT
Sbjct: 299 PVTPVAHYT 307


>sp|NADB_PYRAB|L-ASPARTATE oxidase|Pyrococcus abyssi (strain GE5 /

Query: 2 PMNPVARYT 10
P+ PVA YT
Sbjct: 302 PVTPVAHYT 310


>sp|AATB_PYRFU|A-TYPE ATP synthase subunit B|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PMNPVAR 8
P+NPVAR
Sbjct: 115 PLNPVAR 121


>sp|AATB_PYRAB|A-TYPE ATP synthase subunit B|Pyrococcus abyssi (strain GE5 /

Query: 2 PMNPVAR 8
P+NPVAR
Sbjct: 115 PLNPVAR 121


>sp|AATB_PYRHO|A-TYPE ATP synthase subunit B|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PMNPVAR 8
P+NPVAR
Sbjct: 118 PLNPVAR 124


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 2 PMNPVAR 8
PMNP AR
Sbjct: 120 PMNPAAR 126


>sp|AATB_DESSY|A-TYPE ATP synthase subunit B|Desulfurococcus sp. (strain SY)

Query: 2 PMNPVAR 8
P+NPVAR
Sbjct: 116 PLNPVAR 122


>sp|AATB_THESI|A-TYPE ATP synthase subunit B|Thermococcus sp. (strain KI)

Query: 2 PMNPVAR 8
P+NPVAR
Sbjct: 116 PLNPVAR 122


>sp|AATB_THEKO|A-TYPE ATP synthase subunit B|Thermococcus kodakarensis (strain ATCC

Query: 2 PMNPVAR 8
P+NPVAR
Sbjct: 118 PLNPVAR 124


>sp|AATB_THEGJ|A-TYPE ATP synthase subunit B|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PMNPVAR 8
P+NPVAR
Sbjct: 116 PLNPVAR 122


>sp|AATB_THEON|A-TYPE ATP synthase subunit B|Thermococcus onnurineus (strain NA1)

Query: 2 PMNPVAR 8
P+NPVAR
Sbjct: 118 PLNPVAR 124


>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PMNPVAR 8
PMNP AR
Sbjct: 121 PMNPSAR 127


>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PMNPVAR 8
P+NPV+R
Sbjct: 120 PLNPVSR 126


>sp|AATB_METM5|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C5 /

Query: 2 PMNPVAR 8
P+NPV+R
Sbjct: 120 PLNPVSR 126


>sp|AATB_THEPD|A-TYPE ATP synthase subunit B|Thermofilum pendens (strain DSM 2475

Query: 1 QPMNPVAR 8
+P+NP++R
Sbjct: 115 EPINPISR 122


>sp|AATB_HYPBU|A-TYPE ATP synthase subunit B|Hyperthermus butylicus (strain DSM 5456

Query: 1 QPMNPVAR 8
+P+NP AR
Sbjct: 123 EPLNPAAR 130


>sp|AATB_METMP|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain DSM 14266

Query: 2 PMNPVAR 8
P+NPV+R
Sbjct: 120 PLNPVSR 126


>sp|AATB_METM7|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C7 /

Query: 2 PMNPVAR 8
P+NPV+R
Sbjct: 120 PLNPVSR 126


>sp|AATB_METM6|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C6 /

Query: 2 PMNPVAR 8
P+NPV+R
Sbjct: 120 PLNPVSR 126


>sp|AATB_METS3|A-TYPE ATP synthase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 2 PMNPVAR 8
PMNP +R
Sbjct: 120 PMNPASR 126


>sp|AATB_METJA|A-TYPE ATP synthase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PMNPVAR 8
P+NPV+R
Sbjct: 120 PLNPVSR 126


>sp|SAT_AERPE|SULFATE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PMNPVARYT 10
P NP+ RYT
Sbjct: 163 PPNPLERYT 171


>sp|AATB_METVS|A-TYPE ATP synthase subunit B|Methanococcus vannielii (strain ATCC 35089

Query: 2 PMNPVAR 8
P+NPV+R
Sbjct: 120 PLNPVSR 126


>sp|HCGE_METTM|GUANYLYLPYRIDINOL adenylase HcgE|Methanothermobacter marburgensis (strain ATCC

Query: 2 PMNPVARY 9
P NP+A Y
Sbjct: 156 PENPIAAY 163


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 PMNPVAR 8
P+NP AR
Sbjct: 122 PINPAAR 128


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PMNPVAR 8
P+NP AR
Sbjct: 117 PLNPAAR 123


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PMNPVAR 8
P+NP AR
Sbjct: 117 PLNPAAR 123


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PMNPVAR 8
P+NP AR
Sbjct: 117 PLNPAAR 123


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 2 PMNPVAR 8
P+NP AR
Sbjct: 117 PLNPAAR 123


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PMNPVAR 8
P+NP AR
Sbjct: 117 PLNPAAR 123


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PMNPVAR 8
P+NP AR
Sbjct: 117 PLNPAAR 123


>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 2 PMNPVAR 8
P+NP AR
Sbjct: 117 PLNPAAR 123


>sp|AATB_METTL|A-TYPE ATP synthase subunit B|Methanothermococcus thermolithotrophicus

Query: 2 PMNPVAR 8
P+NPV+R
Sbjct: 52 PLNPVSR 58




201|SequenceR|1010|1001|QDQRQQPMNP

***** No hits found ******


202|SequenceR|1015|1006|ASQHHQDQRQ

>sp|KAE1_ARCFU|TRNA N6-adenosine threonylcarbamoyltransferase|Archaeoglobus fulgidus

Query: 1 ASQHHQDQ 8
ASQHH ++
Sbjct: 43 ASQHHSER 50




203|SequenceR|1020|1011|APHMMASQHH

>sp|AMPP2_ARCFU|AMP phosphorylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PHMMAS 7
PH+MAS
Sbjct: 260 PHLMAS 265


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 APHMMASQH 9
A HM SQH
Sbjct: 933 AEHMTFSQH 941


>sp|DFX_METTH|DESULFOFERRODOXIN homolog|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PHMMASQHH 10
PH M HH
Sbjct: 68 PHPMEENHH 76




204|SequenceR|1025|1016|PGAASAPHMM

>sp|HUTI_HALMA|IMIDAZOLONEPROPIONASE marismortui (strain ATCC 43049

Query: 2 GAASAPHMM 10
GAASA H++
Sbjct: 262 GAASADHLL 270


>sp|SYK_CENSM|LYSINE--TRNA ligase|Cenarchaeum symbiosum

Query: 2 GAASAPHM 9
GA+ PHM
Sbjct: 38 GASGIPHM 45




205|SequenceR|1030|1021|TAAIPPGAAS

>sp|1A1D_PYRHO|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus horikoshii

Query: 4 IPPGAAS 10
IPPG AS
Sbjct: 154 IPPGGAS 160




206|SequenceR|1035|1026|SYAPPTAAIP

>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 2 YAPPTAAI 9
Y PP AAI
Sbjct: 312 YVPPDAAI 319


>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 SYAPPTAAIP 10
SY TAAIP
Sbjct: 8 SYTYGTAAIP 17


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 YAPPTAAI 9
Y PPTA +
Sbjct: 307 YQPPTAVV 314


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SYAPPTAAIP 10
+Y PPT P
Sbjct: 516 AYKPPTPGTP 525


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 1 SYAPPTAAI 9
+YAPP A +
Sbjct: 424 AYAPPFAPV 432


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 1 SYAPPTAAI 9
+YAPP A +
Sbjct: 421 AYAPPFAPV 429


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 1 SYAPPTAAI 9
+YAPP A +
Sbjct: 425 AYAPPFAPV 433


>sp|KAE1B_METLZ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 YAPPTAAI 9
Y PPT I
Sbjct: 33 YVPPTGGI 40




207|SequenceR|1040|1031|AVYQTSYAPP

>sp|KAD_ARCFU|ADENYLATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AVYQTSYAPP 10
AVY YAPP
Sbjct: 135 AVYHLIYAPP 144


>sp|KAD_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 AVYQTSYAPP 10
AVY +Y PP
Sbjct: 133 AVYHITYNPP 142


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AVYQTSYAPP 10
AVY Y PP
Sbjct: 133 AVYHVKYNPP 142


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 AVYQTSYAPP 10
AVY Y PP
Sbjct: 133 AVYHLRYRPP 142


>sp|COPP_THEVO|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP phosphatase|Thermoplasma

Query: 3 YQTSYAPP 10
Y T+Y PP
Sbjct: 321 YDTTYTPP 328


>sp|RL4_META3|LARGE ribosomal subunit protein uL4|Methanococcus aeolicus (strain ATCC

Query: 1 AVYQTSYAP 9
AV++T Y P
Sbjct: 20 AVFETEYRP 28


>sp|RL4_METM5|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain

Query: 1 AVYQTSYAP 9
AV++T Y P
Sbjct: 20 AVFETEYRP 28


>sp|RL4_METM7|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain

Query: 1 AVYQTSYAP 9
AV++T Y P
Sbjct: 20 AVFETEYRP 28


>sp|KAD_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AVYQTSYAPP 10
AVY + PP
Sbjct: 133 AVYHVEFNPP 142


>sp|RL4_METM6|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain

Query: 1 AVYQTSYAP 9
AV++T Y P
Sbjct: 20 AVFETEYRP 28


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 AVYQTSYAPP 10
AVY + PP
Sbjct: 133 AVYHVEFNPP 142


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 5 TSYAPP 10
T YAPP
Sbjct: 180 TKYAPP 185


>sp|RL4_NATPD|LARGE ribosomal subunit protein uL4|Natronomonas pharaonis (strain ATCC

Query: 1 AVYQTSYAP 9
AV++T Y P
Sbjct: 20 AVFETDYRP 28




208|SequenceR|1045|1036|QQPSYAVYQT

***** No hits found ******


209|SequenceR|1050|1041|PQNPFQQPSY

>sp|PUS10_THEPD|TRNA pseudouridine synthase Pus10|Thermofilum pendens (strain DSM 2475

Query: 1 PQNPFQQP 8
PQNP+ QP
Sbjct: 222 PQNPWPQP 229


>sp|AGLB1_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NPFQQPSY 10
NP+++P Y
Sbjct: 453 NPYEKPEY 460


>sp|CHEY_HALS3|CHEMOTAXIS protein CheY|Halobacterium salinarum (strain ATCC 29341

Query: 4 PFQQPS 9
PFQ+PS
Sbjct: 104 PFQKPS 109


>sp|Y989_METJA|UNCHARACTERIZED protein MJ0989|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QNPFQQPSY 10
QNP + P+Y
Sbjct: 50 QNPSEVPNY 58


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PQNPFQQPS 9
P NP +QPS
Sbjct: 457 PGNPPEQPS 465


>sp|SYFA_HALSA|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 700922

Query: 3 NPFQQPSY 10
NP+ +PS+
Sbjct: 420 NPYTEPSF 427


>sp|SYFA_HALS3|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 29341

Query: 3 NPFQQPSY 10
NP+ +PS+
Sbjct: 420 NPYTEPSF 427


>sp|FLAB3_METVO|FLAGELLIN B3|Methanococcus voltae

Query: 4 PFQQPSY 10
PF+ P+Y
Sbjct: 146 PFEDPTY 152


>sp|Y008_METKA|UNCHARACTERIZED protein MK0008|Methanopyrus kandleri (strain AV19 /

Query: 2 QNPFQQPSY 10
QNP + P+Y
Sbjct: 57 QNPDEVPNY 65




210|SequenceR|1055|1046|VHQVLPQNPF

>sp|HACA_METMA|PROBABLE methanogen homoaconitase large subunit|Methanosarcina mazei

Query: 2 HQVLPQNPF 10
HQVLP+N F
Sbjct: 79 HQVLPENGF 87


>sp|HACA_METAC|PROBABLE methanogen homoaconitase large subunit|Methanosarcina acetivorans

Query: 2 HQVLPQNPF 10
HQVLP+N F
Sbjct: 112 HQVLPENGF 120


>sp|HACA_METTH|PROBABLE methanogen homoaconitase large subunit|Methanothermobacter

Query: 2 HQVLPQNPF 10
HQVLP+ F
Sbjct: 108 HQVLPERGF 116


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 1 VHQVLPQNPF 10
+H LP++PF
Sbjct: 364 LHSKLPRSPF 373


>sp|Y1350_METJA|UNCHARACTERIZED protein MJ1350|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VHQVLPQNP 9
+H++L +NP
Sbjct: 23 IHEILRENP 31


>sp|PUS10_THEPD|TRNA pseudouridine synthase Pus10|Thermofilum pendens (strain DSM 2475

Query: 5 LPQNPF 10
LPQNP+
Sbjct: 221 LPQNPW 226


>sp|PELO_CENSY|PROTEIN pelota homolog|Cenarchaeum symbiosum (strain A)

Query: 4 VLPQNP 9
V+PQNP
Sbjct: 13 VVPQNP 18


>sp|HIS1_METAR|ATP phosphoribosyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VHQVLPQN 8
VH V+P+N
Sbjct: 251 VHAVVPEN 258


>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 2 HQVLPQNPF 10
H VLPQ F
Sbjct: 439 HNVLPQKIF 447


>sp|LEUC_METTH|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanothermobacter

Query: 2 HQVLPQ 7
HQVLP+
Sbjct: 103 HQVLPE 108


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 2 HQVLPQ 7
HQVLP+
Sbjct: 103 HQVLPE 108


>sp|LEUC_METJA|ISOPROPYLMALATE/CITRAMALATE isomerase large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 HQVLPQ 7
HQVLP+
Sbjct: 103 HQVLPE 108


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 2 HQVLPQ 7
HQVLP+
Sbjct: 103 HQVLPE 108


>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 2 HQVLPQ 7
HQVLP+
Sbjct: 102 HQVLPE 107


>sp|NADK_THEGJ|NAD kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 HQVLPQNPF 10
H++ P+ PF
Sbjct: 264 HEIYPRYPF 272


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 HQVLPQNPF 10
HQ P +PF
Sbjct: 562 HQYHPDHPF 570


>sp|MRE11_METMA|DNA double-strand break repair protein|Methanosarcina mazei (strain

Query: 1 VHQVLPQNPF 10
+HQ++ +PF
Sbjct: 157 MHQIMQPSPF 166




211|SequenceR|1060|1051|SQYHPVHQVL

>sp|Y811_METJA|UNCHARACTERIZED protein MJ0811|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SQYHPVHQVL 10
SQYHP+H+ L
Sbjct: 33 SQYHPIHEKL 42


>sp|AATB_METBU|A-TYPE ATP synthase subunit B|Methanococcoides burtonii (strain DSM 6242

Query: 2 QYHPVHQ 8
+YHP HQ
Sbjct: 451 KYHPAHQ 457


>sp|AATB_METMA|A-TYPE ATP synthase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QYHPVHQ 8
+YHP H+
Sbjct: 451 KYHPAHR 457


>sp|AATB_METAC|A-TYPE ATP synthase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 2 QYHPVHQ 8
+YHP H+
Sbjct: 451 KYHPAHR 457


>sp|AATB_METBF|A-TYPE ATP synthase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 2 QYHPVHQ 8
+YHP H+
Sbjct: 451 KYHPAHR 457


>sp|AATB_METBA|A-TYPE ATP synthase subunit B|Methanosarcina barkeri

Query: 2 QYHPVHQ 8
+YHP H+
Sbjct: 451 KYHPAHR 457


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SQYHPVHQVL 10
+Q P+HQVL
Sbjct: 239 AQKVPLHQVL 248


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 1 SQYHPV 6
SQ+HPV
Sbjct: 727 SQHHPV 732


>sp|PIWI_ARCFU|PIWI protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YHPVHQVL 10
YH VH++L
Sbjct: 361 YHNVHEIL 368


>sp|KPRS_SACS2|RIBOSE-PHOSPHATE pyrophosphokinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 HPVHQV 9
HP HQ+
Sbjct: 143 HPYHQI 148


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 QYHPVH 7
QYHP H
Sbjct: 563 QYHPDH 568


>sp|IF2B_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 4 HPVHQV 9
HP+H V
Sbjct: 131 HPIHSV 136




212|SequenceR|1065|1056|VHPHQSQYHP

>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VHPHQSQY 8
VHPHQ+ Y
Sbjct: 253 VHPHQTSY 260


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 1 VHPHQSQYHP 10
V PH Y P
Sbjct: 72 VKPHPGNYKP 81


>sp|GLMS_METAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina acetivorans (strain

Query: 2 HPHQSQYHP 10
HPH S +P
Sbjct: 84 HPHNSGGNP 92


>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 2 HPHQSQYHP 10
HPH S +P
Sbjct: 84 HPHNSGGNP 92


>sp|RL2_PYRIL|LARGE ribosomal subunit protein uL2|Pyrobaculum islandicum (strain DSM

Query: 2 HPHQSQYHP 10
HPH HP
Sbjct: 201 HPHGGGSHP 209


>sp|LYSY_SULTO|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PHQSQYHP 10
PH+ +HP
Sbjct: 188 PHEGSHHP 195




213|SequenceR|1070|1061|IVPSYVHPHQ

>sp|DTDA_THEON|D-AMINOACYL-TRNA deacylase|Thermococcus onnurineus (strain NA1)

Query: 1 IVPSYVHP 8
I P YVHP
Sbjct: 216 IAPKYVHP 223


>sp|Y1092_METJA|PUTATIVE nickel/cobalt efflux system MJ1092|Methanocaldococcus jannaschii

Query: 1 IVPSYVHPHQ 10
I+ SY+HPH+
Sbjct: 98 IIRSYLHPHE 107


>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 4 SYVHPHQ 10
S+VHPHQ
Sbjct: 251 SHVHPHQ 257


>sp|RL2_CENSY|LARGE ribosomal subunit protein uL2|Cenarchaeum symbiosum (strain A)

Query: 4 SYVHPH 9
+YVHPH
Sbjct: 197 AYVHPH 202


>sp|RL2_NITMS|LARGE ribosomal subunit protein uL2|Nitrosopumilus maritimus (strain

Query: 4 SYVHPH 9
+YVHPH
Sbjct: 198 AYVHPH 203


>sp|PORB_METTH|PYRUVATE synthase subunit PorB|Methanothermobacter thermautotrophicus

Query: 3 PSYVHPHQ 10
P+Y+H HQ
Sbjct: 199 PAYIHLHQ 206


>sp|PORB_METTM|PYRUVATE synthase subunit PorB|Methanothermobacter marburgensis (strain ATCC

Query: 3 PSYVHPHQ 10
P+Y+H HQ
Sbjct: 199 PAYIHLHQ 206


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 1 IVPSYVHPH 9
+VP Y +PH
Sbjct: 508 LVPHYPYPH 516


>sp|DTDA_THEKO|D-AMINOACYL-TRNA deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IVPSYVHP 8
I P Y HP
Sbjct: 216 IAPKYAHP 223


>sp|CBIA_THEVO|COBYRINATE a,c-diamide synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IVPSYVHPH 9
+V SYVH H
Sbjct: 421 VVASYVHIH 429


>sp|HUTI_THEAC|IMIDAZOLONEPROPIONASE acidophilum (strain ATCC 25905

Query: 2 VPSYVHPH 9
VP +V PH
Sbjct: 64 VPGFVDPH 71


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 4 SYVHPHQ 10
+YVHP+Q
Sbjct: 99 AYVHPYQ 105


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 IVPSYVHPHQ 10
IVP + HP +
Sbjct: 159 IVPRHTHPER 168


>sp|HUTI_HALMA|IMIDAZOLONEPROPIONASE marismortui (strain ATCC 43049

Query: 1 IVPSYVHPH 9
++P +V PH
Sbjct: 69 VIPGFVDPH 77


>sp|SFSA_THEAC|SUGAR fermentation stimulation protein homolog|Thermoplasma acidophilum

Query: 1 IVPSYVHPH 9
+VP+YV H
Sbjct: 183 LVPAYVKAH 191


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 1 IVPSYVHPH 9
IVPS H H
Sbjct: 651 IVPSTYHQH 659


>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IVPSYVH 7
I+PSY H
Sbjct: 139 IMPSYTH 145


>sp|AGLUS_METJA|ARCHAEAL glutamate synthase [NADPH]|Methanocaldococcus jannaschii

Query: 1 IVPSYVHP 8
++PSYV P
Sbjct: 1 MIPSYVPP 8


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 4 SYVHPHQ 10
+YVHP+Q
Sbjct: 99 AYVHPYQ 105


>sp|HUTI_HALSA|IMIDAZOLONEPROPIONASE salinarum (strain ATCC 700922

Query: 1 IVPSYVHPH 9
++P +V PH
Sbjct: 69 VLPGFVDPH 77


>sp|HUTI_HALS3|IMIDAZOLONEPROPIONASE salinarum (strain ATCC 29341

Query: 1 IVPSYVHPH 9
++P +V PH
Sbjct: 69 VLPGFVDPH 77


>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 IVPSYVHPHQ 10
I+P V PHQ
Sbjct: 272 ILPPEVAPHQ 281


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 4 SYVHPHQ 10
+Y+HP+Q
Sbjct: 99 AYIHPYQ 105


>sp|LIPA_HALSA|LIPOYL synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 VPSYVHPHQ 10
V YVHP +
Sbjct: 246 VADYVHPQK 254


>sp|LIPA_HALS3|LIPOYL synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 VPSYVHPHQ 10
V YVHP +
Sbjct: 246 VADYVHPQK 254


>sp|R1PKT_HALXS|ATP-DEPENDENT ribose-1-phosphate kinase|Halopiger xanaduensis (strain DSM 18323

Query: 4 SYVHP 8
SYVHP
Sbjct: 224 SYVHP 228


>sp|PGK2_THEKO|2-PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IVPSYVHPHQ 10
+VP +V P +
Sbjct: 197 VVPGFVEPRE 206


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 4 SYVHPHQ 10
+Y+HP+Q
Sbjct: 99 AYIHPYQ 105


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 IVPSYVHP 8
++ SY HP
Sbjct: 341 VIDSYTHP 348


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 IVPSYVHPHQ 10
+VP + HP +
Sbjct: 159 VVPKHTHPER 168


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 4 SYVHPHQ 10
+Y+HP+Q
Sbjct: 99 AYIHPYQ 105


>sp|GCSPA_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 1 IVPSYVHPHQ 10
+VP + HP +
Sbjct: 158 VVPKHTHPER 167


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 1 IVPSYVH 7
+VP YVH
Sbjct: 150 LVPPYVH 156


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 1 IVPSYVH 7
+VP YVH
Sbjct: 150 LVPPYVH 156


>sp|Y1698_ARCFU|UPF0098 protein AF_1698|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VPSYVHPHQ 10
+P+Y+H H+
Sbjct: 89 LPAYLHLHE 97


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IVPSYVH 7
+VP YVH
Sbjct: 150 LVPPYVH 156


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IVPSYVH 7
+VP YVH
Sbjct: 150 LVPPYVH 156


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IVPSYVH 7
+VP YVH
Sbjct: 150 LVPPYVH 156


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IVPSYVH 7
+VP YVH
Sbjct: 150 LVPPYVH 156


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IVPSYVH 7
+VP YVH
Sbjct: 150 LVPPYVH 156


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 1 IVPSYVH 7
+VP YVH
Sbjct: 150 LVPPYVH 156


>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 SYVHPH 9
SYVH H
Sbjct: 426 SYVHTH 431


>sp|DPHB_METPE|DIPHTHINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IVPSYVHP 8
IVP+ +HP
Sbjct: 230 IVPATLHP 237


>sp|RL2_PYRNV|LARGE ribosomal subunit protein uL2|Pyrobaculum neutrophilum (strain DSM

Query: 5 YVHPH 9
Y HPH
Sbjct: 198 YAHPH 202


>sp|RL2_PYRAR|LARGE ribosomal subunit protein uL2|Pyrobaculum arsenaticum (strain DSM

Query: 5 YVHPH 9
Y HPH
Sbjct: 199 YAHPH 203


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 4 SYVHPH 9
SYVH H
Sbjct: 102 SYVHSH 107


>sp|RL2_PYRAE|LARGE ribosomal subunit protein uL2|Pyrobaculum aerophilum (strain ATCC

Query: 5 YVHPH 9
Y HPH
Sbjct: 199 YAHPH 203




214|SequenceR|1075|1066|RANGQIVPSY

>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 1 RANGQIVPSY 10
R +G++VP Y
Sbjct: 244 RWDGEVVPCY 253


>sp|GLT_PYRHO|SODIUM-ASPARTATE symporter Glt(Ph)|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ANGQIVPS 9
ANGQ++P+
Sbjct: 147 ANGQVLPT 154


>sp|METK_METBU|S-ADENOSYLMETHIONINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 RANGQIVPS 9
R+NG I PS
Sbjct: 288 RSNGLITPS 296


>sp|SRP19_CALMQ|SIGNAL recognition particle 19 kDa|Caldivirga maquilingensis (strain

Query: 1 RANGQIVP 8
R+NG++VP
Sbjct: 20 RSNGRVVP 27


>sp|METK_HALSA|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RANGQIVPS 9
RANG I P+
Sbjct: 295 RANGLITPN 303


>sp|METK_HALS3|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RANGQIVPS 9
RANG I P+
Sbjct: 295 RANGLITPN 303


>sp|METK_METST|S-ADENOSYLMETHIONINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 RANGQIVPS 9
RANG I P+
Sbjct: 294 RANGLITPN 302


>sp|METK_METTH|S-ADENOSYLMETHIONINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 RANGQIVPS 9
RANG I P+
Sbjct: 288 RANGLITPN 296


>sp|METK_METVS|S-ADENOSYLMETHIONINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 RANGQIVP 8
RANG I P
Sbjct: 292 RANGLITP 299


>sp|METK_METTM|S-ADENOSYLMETHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 RANGQIVPS 9
RANG I P+
Sbjct: 288 RANGLITPN 296


>sp|METK_METS3|S-ADENOSYLMETHIONINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 RANGQIVP 8
RANG I P
Sbjct: 288 RANGLITP 295


>sp|METK_METMP|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RANGQIVP 8
RANG I P
Sbjct: 293 RANGLITP 300


>sp|METK_METMI|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 RANGQIVP 8
RANG I P
Sbjct: 293 RANGLITP 300


>sp|METK_METM7|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 RANGQIVP 8
RANG I P
Sbjct: 293 RANGLITP 300


>sp|METK_METM6|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 RANGQIVP 8
RANG I P
Sbjct: 293 RANGLITP 300


>sp|METK_METM5|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 RANGQIVP 8
RANG I P
Sbjct: 293 RANGLITP 300


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 3 NGQIVPSY 10
NG+ +PSY
Sbjct: 456 NGKEIPSY 463


>sp|PUS10_IGNAA|TRNA pseudouridine synthase Pus10|Ignisphaera aggregans (strain DSM

Query: 3 NGQIVPSY 10
NG+ VPS+
Sbjct: 401 NGRTVPSF 408


>sp|AGL12_HALVD|LOW-SALT glycan biosynthesis protein Agl12|Haloferax volcanii (strain ATCC

Query: 2 ANGQIVPSY 10
ANG+ +P Y
Sbjct: 195 ANGETLPVY 203


>sp|METK_META3|S-ADENOSYLMETHIONINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 RANGQIVP 8
RANG I P
Sbjct: 291 RANGLITP 298


>sp|PURQ_METM7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain C7 /

Query: 1 RANGQIVPSY 10
+ NG+I+P +
Sbjct: 246 KRNGEIIPEF 255


>sp|PMDHL_THEKO|PHOSPHOMEVALONATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 RANGQIVP 8
R NG+I+P
Sbjct: 332 RYNGKIIP 339


>sp|METK_METHJ|S-ADENOSYLMETHIONINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RANGQIVP 8
RANG I P
Sbjct: 287 RANGLITP 294


>sp|METK_HALMA|S-ADENOSYLMETHIONINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RANGQIVPS 9
RANG I P+
Sbjct: 287 RANGLITPN 295


>sp|METK_METTP|S-ADENOSYLMETHIONINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RANGQIVPS 9
RANG I P+
Sbjct: 286 RANGLITPN 294


>sp|METK_HALWD|S-ADENOSYLMETHIONINE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RANGQIVPS 9
RANG I P+
Sbjct: 288 RANGLITPN 296


>sp|PHAE_HALMA|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaE|Haloarcula marismortui (strain ATCC 43049

Query: 2 ANGQIVPS 9
ANGQ+V S
Sbjct: 117 ANGQLVES 124


>sp|PHAE_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaE|Haloarcula hispanica (strain ATCC 33960

Query: 2 ANGQIVPS 9
ANGQ+V S
Sbjct: 117 ANGQLVES 124


>sp|FLAB3_METVS|FLAGELLIN B3|Methanococcus vannielii (strain ATCC 35089

Query: 1 RANGQIVPSY 10
+ +G+++P Y
Sbjct: 176 KVSGEVIPEY 185


>sp|METK_PYRAE|S-ADENOSYLMETHIONINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RANGQIVP 8
RANG I P
Sbjct: 290 RANGLITP 297


>sp|METK_PYRIL|S-ADENOSYLMETHIONINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RANGQIVP 8
RANG I P
Sbjct: 290 RANGLITP 297


>sp|METK_PYRNV|S-ADENOSYLMETHIONINE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RANGQIVP 8
RANG I P
Sbjct: 290 RANGLITP 297


>sp|METK_CALMQ|S-ADENOSYLMETHIONINE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 RANGQIVP 8
RANG I P
Sbjct: 295 RANGLITP 302


>sp|PURQ_METMP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain DSM 14266

Query: 1 RANGQIVPSY 10
+ NG I+P +
Sbjct: 246 KRNGDIIPEF 255


>sp|FLAA_METVO|FLAGELLIN A|Methanococcus voltae

Query: 3 NGQIVPSY 10
NG I+P Y
Sbjct: 136 NGAILPEY 143




215|SequenceR|1080|1071|PPAMMRANGQ

>sp|SYFB_PYRAE|PHENYLALANINE--TRNA ligase beta subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPAMMRANGQ 10
PPA++ A+GQ
Sbjct: 189 PPALVDASGQ 198


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 2 PAMMRANG 9
PAM RA+G
Sbjct: 406 PAMKRASG 413


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PAMMRANGQ 10
PAM+ A+G+
Sbjct: 305 PAMLMASGE 313


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PAMMRANGQ 10
PAM+ A+G+
Sbjct: 305 PAMLMASGE 313


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PAMMRANGQ 10
PA++ ANG+
Sbjct: 303 PALLLANGE 311


>sp|GLME_HALMA|GLUTAMATE mutase epsilon subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 PPAMMRANG 9
PP RANG
Sbjct: 290 PPDEARANG 298




216|SequenceR|1085|1076|PQAHTPPAMM

>sp|Y1859_ARCFU|UNCHARACTERIZED protein AF_1859|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PQAHTPP 7
PQ H PP
Sbjct: 17 PQYHLPP 23


>sp|Y1344_THEON|UPF0200 protein TON_1344|Thermococcus onnurineus (strain NA1)

Query: 4 HTPPAM 9
HTPP M
Sbjct: 113 HTPPHM 118


>sp|MTAA_METBF|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri (strain Fusaro /

Query: 1 PQAHTPPAMM 10
P+AHT P +M
Sbjct: 44 PEAHTNPELM 53


>sp|MTAA_METBA|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri

Query: 1 PQAHTPPAMM 10
P+AHT P +M
Sbjct: 44 PEAHTNPELM 53


>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PQAHTPPAMM 10
P A+TP A++
Sbjct: 301 PDANTPAAVL 310


>sp|Y1110_METTH|UNCHARACTERIZED protein MTH_1110|Methanothermobacter thermautotrophicus (strain

Query: 4 HTPPAM 9
HTPPA+
Sbjct: 6 HTPPAV 11




217|SequenceR|1090|1081|SSVLGPQAHT

>sp|PRIL_THEAC|DNA primase large subunit PriL|Thermoplasma acidophilum (strain ATCC

Query: 1 SSVLGPQAHT 10
S+VLG QA++
Sbjct: 48 SAVLGDQAYS 57


>sp|AROA_METB6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoregula boonei (strain DSM 21154

Query: 4 LGPQAHT 10
LGP AHT
Sbjct: 123 LGPLAHT 129




218|SequenceR|1095|1086|YQTASSSVLG

***** No hits found ******


219|SequenceR|1100|1091|QEHAGYQTAS

>sp|Y1214_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 1 QEHAGYQTA 9
Q HAGY+ A
Sbjct: 106 QVHAGYEMA 114


>sp|G1PDH_METKA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanopyrus kandleri (strain AV19 /

Query: 2 EHAGYQTA 9
E AGYQT+
Sbjct: 59 EEAGYQTS 66


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EHAGYQTAS 10
++AGY+TA+
Sbjct: 254 QYAGYKTAT 262


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 2 EHAGYQ 7
EHAGY+
Sbjct: 1216 EHAGYE 1221


>sp|CAPPA_PYRCJ|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 EHAGYQTAS 10
++AGY TA+
Sbjct: 248 QYAGYYTAT 256


>sp|CAS6B_SACS2|CRISPR-ASSOCIATED endoribonuclease Cas6 2|Saccharolobus solfataricus (strain ATCC

Query: 3 HAGYQT 8
HAGY T
Sbjct: 165 HAGYST 170


>sp|KORA_METTM|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter marburgensis (strain

Query: 1 QEHAGY 6
QEH GY
Sbjct: 87 QEHVGY 92


>sp|CAPPA_PYRAR|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 EHAGYQTAS 10
++AGY TA+
Sbjct: 249 QYAGYYTAT 257


>sp|KORA_METTH|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter thermautotrophicus

Query: 1 QEHAGY 6
QEH GY
Sbjct: 87 QEHVGY 92


>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QEHAGYQTAS 10
+ H GY TA+
Sbjct: 531 ENHEGYATAA 540




220|SequenceR|1105|1096|YMAHTQEHAG

>sp|GGR2_METKA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanopyrus kandleri (strain AV19 /

Query: 3 AHTQEHAG 10
AH EHAG
Sbjct: 49 AHGLEHAG 56


>sp|SYS_NITMS|SERINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 YMAHTQEHA 9
YM T EHA
Sbjct: 225 YMIGTSEHA 233


>sp|OTC_METKA|ORNITHINE carbamoyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 MAHTQEHA 9
M+H EHA
Sbjct: 259 MSHAPEHA 266




221|SequenceR|1110|1101|LKPCAYMAHT

>sp|CS3HD_SACS2|CRISPR-ASSOCIATED endonuclease Cas3-HD|Saccharolobus solfataricus (strain ATCC

Query: 1 LKPCAY 6
+KPCAY
Sbjct: 2 IKPCAY 7


>sp|Y725_METJA|UNCHARACTERIZED protein MJ0725|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KPCAYMAHT 10
KP AY+A T
Sbjct: 45 KPVAYLATT 53




222|SequenceR|1115|1106|EKNYPLKPCA

>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EKNYPLKPCA 10
E N+PL P A
Sbjct: 454 ENNHPLAPAA 463


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 1 EKNYPLKPCA 10
E N+PL P A
Sbjct: 451 ENNHPLSPAA 460


>sp|FLPA_PYRHO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus horikoshii (strain

Query: 2 KNYPLKP 8
KN+P+KP
Sbjct: 67 KNFPIKP 73


>sp|Y915_ARCFU|UNCHARACTERIZED protein AF_0915|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NYPLKP 8
NYP+KP
Sbjct: 17 NYPVKP 22


>sp|FLPA_THEGJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus gammatolerans

Query: 2 KNYPLKP 8
KN+P+KP
Sbjct: 66 KNFPIKP 72


>sp|FLPA_PYRAB|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 KNYPLKP 8
KN+P+KP
Sbjct: 67 KNFPIKP 73


>sp|FLPA_PYRFU|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 2 KNYPLKP 8
KN+P+KP
Sbjct: 67 KNFPIKP 73


>sp|FLPA_THEKO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus kodakarensis

Query: 2 KNYPLKP 8
KN+P+KP
Sbjct: 66 KNFPIKP 72


>sp|FLPA_THESM|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus sibiricus (strain

Query: 2 KNYPLKP 8
KN+P+KP
Sbjct: 66 KNFPIKP 72


>sp|Y289_METJA|UNCHARACTERIZED protein MJ0289|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PLKPC 9
PLKPC
Sbjct: 301 PLKPC 305


>sp|GCST_PYRHO|PROBABLE aminomethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KNYPLKPCA 10
K Y +KPC
Sbjct: 236 KKYGIKPCG 244


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 1 EKNYPLKPCA 10
E N+PL P +
Sbjct: 443 ENNHPLAPAS 452


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 EKNYPLK 7
+KNYP+K
Sbjct: 644 KKNYPVK 650


>sp|CG121_PYRAB|KEOPS complex subunit Cgi121|Pyrococcus abyssi (strain GE5 /

Query: 5 PLKPC 9
PLKPC
Sbjct: 149 PLKPC 153


>sp|MOAA_PYRAB|PROBABLE GTP 3',8-cyclase|Pyrococcus abyssi (strain GE5 /

Query: 4 YPLKP 8
YPLKP
Sbjct: 200 YPLKP 204


>sp|MOAA_PYRHO|PROBABLE GTP 3',8-cyclase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 YPLKP 8
YPLKP
Sbjct: 200 YPLKP 204


>sp|MOAA_PYRFU|PROBABLE GTP 3',8-cyclase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 YPLKP 8
YPLKP
Sbjct: 200 YPLKP 204


>sp|RL15E_METAR|LARGE ribosomal subunit protein eL15|Methanocella arvoryzae (strain DSM

Query: 1 EKNYP 5
EKNYP
Sbjct: 182 EKNYP 186


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 EKNYPLKPCA 10
E N+PL P A
Sbjct: 415 ENNHPLMPPA 424


>sp|BIOB_META3|BIOTIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 KNYPLKP 8
K YPLKP
Sbjct: 82 KEYPLKP 88


>sp|MOAA_THEKO|PROBABLE GTP 3',8-cyclase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 YPLKP 8
YPLKP
Sbjct: 201 YPLKP 205


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EKNYPL 6
EKNYP+
Sbjct: 824 EKNYPI 829


>sp|RS5_SULTO|SMALL ribosomal subunit protein uS5|Sulfurisphaera tokodaii (strain DSM

Query: 1 EKNYPL 6
EKNYP+
Sbjct: 36 EKNYPI 41


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 EKNYPLKP 8
E N+PL P
Sbjct: 421 ENNHPLMP 428


>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 YPLKPCA 10
YPLK C
Sbjct: 22 YPLKGCG 28


>sp|Y1398_METMP|UNCHARACTERIZED metallohydrolase MMP1398|Methanococcus maripaludis (strain DSM

Query: 2 KNYPLKPC 9
KNY +K C
Sbjct: 46 KNYSIKNC 53


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 EKNYPLKP 8
E N+PL P
Sbjct: 421 ENNHPLMP 428


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 EKNYPLKP 8
E N+PL P
Sbjct: 421 ENNHPLMP 428


>sp|FLPA_THEON|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus onnurineus (strain

Query: 2 KNYPLKP 8
K++P+KP
Sbjct: 66 KHFPIKP 72




223|SequenceR|1120|1111|FSPSTEKNYP

>sp|RL15E_METAR|LARGE ribosomal subunit protein eL15|Methanocella arvoryzae (strain DSM

Query: 5 TEKNYP 10
TEKNYP
Sbjct: 181 TEKNYP 186


>sp|YNH2_METBA|UNCHARACTERIZED protein in nifH2 5'region|Methanosarcina barkeri

Query: 3 PSTEKNYP 10
P T KNYP
Sbjct: 67 PDTLKNYP 74


>sp|HIS7_METM7|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcus maripaludis (strain C7 /

Query: 1 FSPSTEK 7
++PSTEK
Sbjct: 117 YTPSTEK 123


>sp|CAPPA_PYRAR|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FSPSTEKNY 9
F P T +NY
Sbjct: 402 FDPQTARNY 410


>sp|GPMA_METAC|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 FSPSTEKN 8
+ P+TEKN
Sbjct: 105 YPPNTEKN 112


>sp|DTDA_ARCFU|D-AMINOACYL-TRNA deacylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SPSTEKNY 9
SP T KNY
Sbjct: 109 SPQTMKNY 116




224|SequenceR|1125|1116|SIAFYFSPST

>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 AFYFSP 8
A+YFSP
Sbjct: 171 AYYFSP 176


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 SIAFYFSPST 10
S AFY++P+T
Sbjct: 730 SQAFYYAPAT 739




225|SequenceR|1130|1121|ALSGTSIAFY

>sp|NADM_METLZ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 ALSGTSIAFY 10
AL+G I FY
Sbjct: 60 ALNGLKIPFY 69


>sp|HTPX_AERPE|PROTEASE HtpX homolog|Aeropyrum pernix (strain ATCC 700893

Query: 1 ALSGTSIAF 9
LSGT +AF
Sbjct: 28 GLSGTGVAF 36




226|SequenceR|1135|1126|HAYQQALSGT

>sp|GGGPS_META3|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 AYQQALSG 9
AYQ+ LSG
Sbjct: 209 AYQKVLSG 216


>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HAYQQALS 8
H YQ+AL+
Sbjct: 752 HKYQEALN 759


>sp|HISX_METBF|HISTIDINOL dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 3 YQQALSG 9
+QQALSG
Sbjct: 71 FQQALSG 77


>sp|Y345_METJA|UNCHARACTERIZED protein MJ0345|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AYQQALSGT 10
AYQ A+ GT
Sbjct: 234 AYQPAVDGT 242




227|SequenceR|1140|1131|LTANPHAYQQ

>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 ANPHAY 8
ANPHAY
Sbjct: 199 ANPHAY 204


>sp|IXTPA_IGNH4|DITP/XTP pyrophosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LTANPHAYQQ 10
LT+NPH ++
Sbjct: 9 LTSNPHKAKE 18


>sp|GSA_METAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ANPHAYQQ 10
A PH YQ+
Sbjct: 364 AEPHNYQE 371


>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LTANPHAYQQ 10
L NPH Y++
Sbjct: 8 LILNPHNYKE 17


>sp|GSA_METBF|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina barkeri (strain Fusaro /

Query: 3 ANPHAYQQ 10
A PH YQ+
Sbjct: 364 AEPHNYQE 371


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 3 ANPHAY 8
ANPHA+
Sbjct: 202 ANPHAH 207


>sp|TOP6B_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 3 ANPHAY 8
ANPHA+
Sbjct: 200 ANPHAH 205


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 3 ANPHAY 8
ANPHA+
Sbjct: 199 ANPHAH 204


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 3 ANPHAY 8
ANPHA+
Sbjct: 199 ANPHAH 204


>sp|RELE4_METJA|PUTATIVE toxin RelE4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTANPHAYQ 9
+T NPH Y+
Sbjct: 35 ITQNPHHYK 43


>sp|TOP6B_THEGJ|TYPE 2 DNA topoisomerase 6|Thermococcus gammatolerans (strain DSM 15229

Query: 3 ANPHAY 8
ANPHA+
Sbjct: 199 ANPHAH 204


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 3 ANPHAY 8
ANPHA+
Sbjct: 200 ANPHAH 205


>sp|RS8E_METTH|SMALL ribosomal subunit protein eS8|Methanothermobacter

Query: 2 TANPH 6
TANPH
Sbjct: 84 TANPH 88


>sp|MTRH_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanothermobacter marburgensis

Query: 1 LTANPHAYQ 9
+T NPH Q
Sbjct: 67 VTGNPHIVQ 75


>sp|MTRH_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanothermobacter

Query: 1 LTANPHAYQ 9
+T NPH Q
Sbjct: 67 VTGNPHIVQ 75


>sp|IXTPA_PICTO|DITP/XTP pyrophosphatase|Picrophilus torridus (strain ATCC 700027

Query: 1 LTANPHAYQQ 10
+T+N H Y++
Sbjct: 4 ITSNRHKYEE 13




228|SequenceR|1145|1136|PTHPHLTANP

>sp|PYRE_CENSY|OROTATE phosphoribosyltransferase|Cenarchaeum symbiosum (strain A)

Query: 1 PTHPH 5
P+HPH
Sbjct: 40 PSHPH 44


>sp|COFH_METPE|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanosphaerula palustris (strain ATCC

Query: 3 HPHLTA 8
HPH TA
Sbjct: 118 HPHFTA 123


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi

Query: 1 PTHPHLTANP 10
P H +TANP
Sbjct: 80 PIHSFVTANP 89


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PTHPHLTANP 10
P PH ANP
Sbjct: 253 PILPHKAANP 262


>sp|RL15E_METJA|LARGE ribosomal subunit protein eL15|Methanocaldococcus jannaschii

Query: 1 PTHPHLTANP 10
P HP + A+P
Sbjct: 135 PYHPAIKADP 144


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PTHPH 5
P+HPH
Sbjct: 122 PSHPH 126


>sp|Y2423_ARCFU|UNCHARACTERIZED protein AF_2423|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 THPHLTANP 10
T+ H TA+P
Sbjct: 17 TYQHFTASP 25


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui

Query: 1 PTHPHLTANP 10
P H +TANP
Sbjct: 23 PIHSFVTANP 32


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 2 THPHLTAN 9
THP LTA+
Sbjct: 156 THPGLTAD 163


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 1 PTHPHLTANP 10
P H HL +P
Sbjct: 119 PEHTHLELDP 128


>sp|DTDA_DESA1|D-AMINOACYL-TRNA deacylase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 4 PHLTANP 10
PH T NP
Sbjct: 26 PHRTTNP 32


>sp|CBIA_METJA|COBYRINATE a,c-diamide synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 HPHLTANP 10
H H ANP
Sbjct: 425 HNHAVANP 432


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis

Query: 1 PTHPHLTANP 10
P H +TANP
Sbjct: 28 PLHSFVTANP 37


>sp|RS4_THEVO|SMALL ribosomal subunit protein uS4|Thermoplasma volcanium (strain ATCC

Query: 2 THPHLTAN 9
TH H+T N
Sbjct: 129 THGHITVN 136


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 1 PTHPHLTAN 9
P HPH A+
Sbjct: 333 PLHPHDVAS 341


>sp|RNJ_HALSA|RIBONUCLEASE J|Halobacterium salinarum (strain ATCC 700922

Query: 1 PTHPHL 6
PTH HL
Sbjct: 79 PTHGHL 84




229|SequenceR|1150|1141|SPQPHPTHPH

>sp|SYE_HALSA|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SPQPHPTHP 9
+PQ HP HP
Sbjct: 455 TPQVHPEHP 463


>sp|SYE_HALS3|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 SPQPHPTHP 9
+PQ HP HP
Sbjct: 455 TPQVHPEHP 463


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 SPQPHPTHPH 10
+PQP T PH
Sbjct: 309 APQPRNTPPH 318


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 SPQPHP--THP 9
SPQP P T P
Sbjct: 305 SPQPQPESTQP 315


>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 PQPHPTHPH 10
PQ HP H
Sbjct: 269 PQDHPARTH 277


>sp|RL4_METMJ|LARGE ribosomal subunit protein uL4|Methanoculleus marisnigri (strain

Query: 3 QPHPTHPH 10
QPH T+P+
Sbjct: 44 QPHGTNPY 51


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 HPTHP 9
HPTHP
Sbjct: 429 HPTHP 433


>sp|RS4E_METS5|SMALL ribosomal subunit protein eS4|Metallosphaera sedula (strain ATCC

Query: 1 SPQPHP 6
SP PHP
Sbjct: 27 SPGPHP 32


>sp|LYSY_PYRCJ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PQPHP 6
PQPHP
Sbjct: 116 PQPHP 120


>sp|LYSY_PYRIL|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PQPHP 6
PQPHP
Sbjct: 116 PQPHP 120


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PQPHP 6
PQPHP
Sbjct: 115 PQPHP 119


>sp|HMGCS_ARCFU|HYDROXYMETHYLGLUTARYL-COA synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QPHPTH 8
QP+P+H
Sbjct: 190 QPYPSH 195


>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 1 SPQPHPT 7
SP+PH T
Sbjct: 280 SPRPHDT 286


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HPTHPH 10
HP HP+
Sbjct: 741 HPEHPN 746


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus vannielii

Query: 1 SPQPHPT 7
SP+PH T
Sbjct: 279 SPRPHDT 285


>sp|LYSY_PYRNV|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PQPHP 6
PQPHP
Sbjct: 116 PQPHP 120


>sp|GSA_HALSA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SPQPHPT 7
+PQP+PT
Sbjct: 28 APQPYPT 34


>sp|GSA_HALS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 29341

Query: 1 SPQPHPT 7
+PQP+PT
Sbjct: 28 APQPYPT 34


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus aeolicus

Query: 1 SPQPHPT 7
SP+PH T
Sbjct: 282 SPRPHDT 288


>sp|RS4E_DESA1|SMALL ribosomal subunit protein eS4|Desulfurococcus amylolyticus

Query: 1 SPQPHP 6
SP PHP
Sbjct: 33 SPGPHP 38


>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PQPHP 6
PQPHP
Sbjct: 118 PQPHP 122


>sp|THPR_AERPE|RNA 2',3'-cyclic phosphodiesterase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SPQPHPTHPH 10
SP+ HPH
Sbjct: 104 SPEKQEFHPH 113


>sp|HMGCS_THEVO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 QPHPTH 8
QP+P+H
Sbjct: 191 QPYPSH 196


>sp|RL4_METB6|LARGE ribosomal subunit protein uL4|Methanoregula boonei (strain DSM

Query: 3 QPHPTHPH 10
QPH ++P+
Sbjct: 44 QPHGSYPY 51


>sp|PURT_METM5|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 1 SPQPHPT 7
SP+PH T
Sbjct: 279 SPRPHDT 285


>sp|PURT_METM7|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 1 SPQPHPT 7
SP+PH T
Sbjct: 279 SPRPHDT 285


>sp|RL24_METJA|LARGE ribosomal subunit protein uL24|Methanocaldococcus jannaschii

Query: 4 PHPTHP 9
P+P HP
Sbjct: 93 PYPIHP 98


>sp|PURT_METMP|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 1 SPQPHPT 7
SP+PH T
Sbjct: 279 SPRPHDT 285


>sp|HMGCS_THEAC|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 QPHPTH 8
QP+P+H
Sbjct: 191 QPYPSH 196


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 HPTHP 9
HP+HP
Sbjct: 429 HPSHP 433


>sp|RS4E_CALMQ|SMALL ribosomal subunit protein eS4|Caldivirga maquilingensis (strain

Query: 1 SPQPHPTH 8
SP PHP +
Sbjct: 27 SPGPHPAN 34


>sp|PURT_SULTO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Sulfurisphaera tokodaii

Query: 1 SPQPHPT 7
SP+PH T
Sbjct: 286 SPRPHDT 292


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 HPTHPH 10
HP HP+
Sbjct: 138 HPVHPN 143


>sp|PURT_IGNH4|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Ignicoccus hospitalis

Query: 1 SPQPHPT 7
SP+PH T
Sbjct: 289 SPRPHDT 295


>sp|RL24_METVS|LARGE ribosomal subunit protein uL24|Methanococcus vannielii (strain

Query: 4 PHPTHP 9
P+P HP
Sbjct: 93 PYPIHP 98


>sp|RL24_METVA|LARGE ribosomal subunit protein uL24|Methanococcus vannielii

Query: 4 PHPTHP 9
P+P HP
Sbjct: 93 PYPIHP 98


>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 1 SPQPHPTHPH 10
S PH T+P+
Sbjct: 391 SRDPHRTNPY 400


>sp|SYFA_HALSA|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 PQPHPTHPH 10
PQ HP H
Sbjct: 274 PQDHPARNH 282


>sp|SYFA_HALS3|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 PQPHPTHPH 10
PQ HP H
Sbjct: 274 PQDHPARNH 282


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 1 SPQPHPT 7
SP+PH T
Sbjct: 290 SPRPHDT 296




230|SequenceR|1155|1146|GTPTASPQPH

>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GTPTASPQPH 10
G PTA+ +PH
Sbjct: 49 GPPTANGRPH 58


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GTPTASPQPH 10
G PTA+ +PH
Sbjct: 49 GPPTANGRPH 58


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 GTPTASPQPH 10
G PTA+ +PH
Sbjct: 50 GPPTANGRPH 59


>sp|ARGC_METMJ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GTPTASPQPH 10
GTP AS PH
Sbjct: 38 GTPVASVHPH 47


>sp|CARA_THEAC|CARBAMOYL phosphate synthase small chain|Thermoplasma acidophilum (strain

Query: 3 PTASPQPH 10
P ASP PH
Sbjct: 322 PEASPGPH 329


>sp|CARA_THEVO|CARBAMOYL phosphate synthase small chain|Thermoplasma volcanium (strain ATCC

Query: 3 PTASPQPH 10
P ASP PH
Sbjct: 322 PEASPGPH 329


>sp|RL3_SACI3|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 GTPTASPQP 9
GTP+ +PQP
Sbjct: 259 GTPSYTPQP 267


>sp|RL3_SACI7|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 GTPTASPQP 9
GTP+ +PQP
Sbjct: 259 GTPSYTPQP 267


>sp|RL3_SACI6|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 GTPTASPQP 9
GTP+ +PQP
Sbjct: 259 GTPSYTPQP 267


>sp|RL3_SACI4|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 GTPTASPQP 9
GTP+ +PQP
Sbjct: 259 GTPSYTPQP 267


>sp|RL3_SACI2|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 GTPTASPQP 9
GTP+ +PQP
Sbjct: 259 GTPSYTPQP 267


>sp|RL3_SACI1|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 GTPTASPQP 9
GTP+ +PQP
Sbjct: 259 GTPSYTPQP 267


>sp|RL3_SACS2|LARGE ribosomal subunit protein uL3|Saccharolobus solfataricus (strain

Query: 1 GTPTASPQP 9
GTP+ +PQP
Sbjct: 259 GTPSYTPQP 267


>sp|ALAXM_PYRHO|ALANYL-TRNA editing protein AlaX-M|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PTASPQPH 10
PT QPH
Sbjct: 39 PTGGGQPH 46


>sp|CARA_METVS|CARBAMOYL phosphate synthase small chain|Methanococcus vannielii (strain ATCC

Query: 3 PTASPQPH 10
P A P PH
Sbjct: 338 PEAGPGPH 345


>sp|CARA_METMP|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain

Query: 3 PTASPQPH 10
P A P PH
Sbjct: 337 PEAGPGPH 344


>sp|CARA_METM7|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C7

Query: 3 PTASPQPH 10
P A P PH
Sbjct: 337 PEAGPGPH 344


>sp|CARA_METM5|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C5

Query: 3 PTASPQPH 10
P A P PH
Sbjct: 337 PEAGPGPH 344


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GTPTASPQPH 10
G PT + PH
Sbjct: 48 GPPTTNGMPH 57


>sp|CARA_METM6|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C6

Query: 3 PTASPQPH 10
P A P PH
Sbjct: 337 PEAGPGPH 344


>sp|RL3_METS5|LARGE ribosomal subunit protein uL3|Metallosphaera sedula (strain ATCC

Query: 1 GTPTASPQP 9
GTP+ PQP
Sbjct: 249 GTPSYVPQP 257


>sp|CARA_ARCFU|CARBAMOYL phosphate synthase small chain|Archaeoglobus fulgidus (strain ATCC

Query: 3 PTASPQPH 10
P A P PH
Sbjct: 334 PEAGPGPH 341


>sp|RNFD_METAC|ION-TRANSLOCATING oxidoreductase complex subunit D|Methanosarcina acetivorans

Query: 4 TASPQPH 10
T SP PH
Sbjct: 5 TVSPPPH 11


>sp|RS4E_METS5|SMALL ribosomal subunit protein eS4|Metallosphaera sedula (strain ATCC

Query: 2 TPTASPQPH 10
T ASP PH
Sbjct: 23 TVRASPGPH 31


>sp|KDPA_METB6|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Methanoregula boonei (strain DSM

Query: 4 TASPQPH 10
TA+P PH
Sbjct: 464 TANPGPH 470


>sp|KORA_METJA|2-OXOGLUTARATE synthase subunit KorA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GTPTASPQPH 10
G P SP+ H
Sbjct: 231 GYPDVSPETH 240




231|SequenceR|1160|1151|QSQQQGTPTA

>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 QGTPTA 10
QGTPTA
Sbjct: 261 QGTPTA 266


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 QGTPTA 10
QGTPTA
Sbjct: 261 QGTPTA 266


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 5 QGTPTA 10
QGTPTA
Sbjct: 261 QGTPTA 266


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 QGTPTA 10
QGTPTA
Sbjct: 240 QGTPTA 245


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 QGTPTA 10
QGTPTA
Sbjct: 243 QGTPTA 248


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 QGTPTA 10
QGTPTA
Sbjct: 239 QGTPTA 244


>sp|IF2P_PYRCJ|PROBABLE translation initiation factor IF-2|Pyrobaculum calidifontis (strain

Query: 1 QSQQQGTPTA 10
Q Q+QG P A
Sbjct: 516 QIQRQGKPVA 525




232|SequenceR|1165|1156|HSGGHQSQQQ

>sp|RS7_METTP|SMALL ribosomal subunit protein uS7|Methanothrix thermoacetophila

Query: 1 HSGGHQSQQQ 10
H+GG ++QQ
Sbjct: 32 HTGGRHAKQQ 41


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HSGGHQSQQQ 10
HSG ++SQ+Q
Sbjct: 164 HSGINESQKQ 173


>sp|RKD4_PYRCJ|ARCADIN-4 calidifontis (strain DSM 21063

Query: 1 HSGGHQSQ 8
HSG H+++
Sbjct: 67 HSGSHEAR 74


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 HSGGHQSQ 8
H+GGH +
Sbjct: 14 HNGGHSER 21




233|SequenceR|1170|1161|PSPAPHSGGH

>sp|RS4E_METVS|SMALL ribosomal subunit protein eS4|Methanococcus vannielii (strain

Query: 1 PSPAPHS 7
PSP PHS
Sbjct: 32 PSPGPHS 38


>sp|RS4E_METVA|SMALL ribosomal subunit protein eS4|Methanococcus vannielii

Query: 1 PSPAPHS 7
PSP PHS
Sbjct: 32 PSPGPHS 38


>sp|RS4E_METMP|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 PSPAPHS 7
PSP PHS
Sbjct: 32 PSPGPHS 38


>sp|RS4E_METM6|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 PSPAPHS 7
PSP PHS
Sbjct: 32 PSPGPHS 38


>sp|RS4E_METM7|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 PSPAPHS 7
PSP PHS
Sbjct: 32 PSPGPHS 38


>sp|RS4E_METM5|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 PSPAPHS 7
PSP PHS
Sbjct: 32 PSPGPHS 38


>sp|RS4E_NANEQ|SMALL ribosomal subunit protein eS4|Nanoarchaeum equitans (strain

Query: 1 PSPAPHS 7
PSP PHS
Sbjct: 32 PSPGPHS 38


>sp|RS4E_PYRAE|SMALL ribosomal subunit protein eS4|Pyrobaculum aerophilum (strain ATCC

Query: 1 PSPAPHS 7
PSP PHS
Sbjct: 27 PSPGPHS 33


>sp|RS4E_ARCFU|SMALL ribosomal subunit protein eS4|Archaeoglobus fulgidus (strain ATCC

Query: 1 PSPAPHS 7
PSP PH+
Sbjct: 28 PSPGPHN 34


>sp|RS4E_PYRAR|SMALL ribosomal subunit protein eS4|Pyrobaculum arsenaticum (strain DSM

Query: 1 PSPAPHS 7
PSP PHS
Sbjct: 27 PSPGPHS 33


>sp|RS4E_PYRNV|SMALL ribosomal subunit protein eS4|Pyrobaculum neutrophilum (strain

Query: 1 PSPAPHS 7
PSP PHS
Sbjct: 27 PSPGPHS 33


>sp|RS4E_THEKO|SMALL ribosomal subunit protein eS4|Thermococcus kodakarensis (strain

Query: 1 PSPAPHS 7
PSP PHS
Sbjct: 32 PSPGPHS 38


>sp|RS4E_KORCO|SMALL ribosomal subunit protein eS4|Korarchaeum cryptofilum (strain

Query: 1 PSPAPHS 7
PSP PH+
Sbjct: 32 PSPGPHA 38


>sp|Y657_ARCFU|UNCHARACTERIZED protein AF_0657|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PAPHSGGH 10
PAP+ G H
Sbjct: 77 PAPYKGRH 84


>sp|SDO1_AERPE|RIBOSOME maturation protein SDO1 homolog|Aeropyrum pernix (strain ATCC

Query: 3 PAPHSG 8
P PHSG
Sbjct: 171 PPPHSG 176


>sp|RS4E_CALMQ|SMALL ribosomal subunit protein eS4|Caldivirga maquilingensis (strain

Query: 1 PSPAPH 6
PSP PH
Sbjct: 26 PSPGPH 31


>sp|WECC_METVS|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 2 SPAPHSGGH 10
+P P GGH
Sbjct: 252 NPGPGVGGH 260


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 SPAPHSGGH 10
+P P GGH
Sbjct: 252 NPGPGVGGH 260


>sp|WECC_METM7|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 2 SPAPHSGGH 10
+P P GGH
Sbjct: 252 NPGPGVGGH 260


>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 2 SPAPHSGGH 10
+P P GGH
Sbjct: 252 NPGPGVGGH 260


>sp|WECC_META3|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 SPAPHSGGH 10
+P P GGH
Sbjct: 257 NPGPGVGGH 265


>sp|RL10_METMP|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain

Query: 2 SPAPHSGG 9
SPAP GG
Sbjct: 113 SPAPVKGG 120


>sp|RL10_METM6|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain C6

Query: 2 SPAPHSGG 9
SPAP GG
Sbjct: 113 SPAPVKGG 120


>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PSPAPHSGG 9
P+PAP G
Sbjct: 154 PTPAPEPAG 162


>sp|RL10_METVS|LARGE ribosomal subunit protein uL10|Methanococcus vannielii (strain ATCC

Query: 2 SPAPHSGG 9
SPAP GG
Sbjct: 113 SPAPIKGG 120


>sp|RL10_METTL|LARGE ribosomal subunit protein uL10|Methanothermococcus

Query: 2 SPAPHSGG 9
SPAP GG
Sbjct: 113 SPAPIKGG 120


>sp|RS4E_METTH|SMALL ribosomal subunit protein eS4|Methanothermobacter

Query: 1 PSPAPHS 7
PSP PH+
Sbjct: 32 PSPGPHA 38


>sp|RL10_METM7|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain C7

Query: 2 SPAPHSGG 9
SPAP GG
Sbjct: 113 SPAPVKGG 120


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PAPHSGGH 10
P P GGH
Sbjct: 255 PGPGVGGH 262


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PSPAPHSG 8
P PAP +G
Sbjct: 284 PYPAPQAG 291


>sp|RS4E_STAMF|SMALL ribosomal subunit protein eS4|Staphylothermus marinus (strain

Query: 1 PSPAPH 6
PSP PH
Sbjct: 32 PSPGPH 37


>sp|PFDA_METB6|PREFOLDIN subunit alpha|Methanoregula boonei (strain DSM 21154

Query: 2 SPAPHSGGH 10
SP PH H
Sbjct: 139 SPVPHRHDH 147


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 SPAPHSG 8
SP PH G
Sbjct: 52 SPTPHIG 58


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 SPAPHSG 8
SP PH G
Sbjct: 52 SPTPHIG 58


>sp|RL10_METM5|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain C5

Query: 2 SPAPHSGG 9
SPAP GG
Sbjct: 113 SPAPVKGG 120


>sp|SURE_CALMQ|5'-NUCLEOTIDASE SurE|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 PSPAPHSGGH 10
PSP+ SGG+
Sbjct: 178 PSPSRWSGGY 187


>sp|RS4E_PYRIL|SMALL ribosomal subunit protein eS4|Pyrobaculum islandicum (strain DSM

Query: 2 SPAPHS 7
SP PHS
Sbjct: 28 SPGPHS 33


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 3 PAPHS 7
PAPHS
Sbjct: 611 PAPHS 615


>sp|RS7_DESA1|SMALL ribosomal subunit protein uS7|Desulfurococcus amylolyticus

Query: 1 PSPAPHSGG 9
P PHSGG
Sbjct: 40 PVYLPHSGG 48


>sp|RL10_METJA|LARGE ribosomal subunit protein uL10|Methanocaldococcus jannaschii

Query: 2 SPAPHSGGH 10
SPAP GG
Sbjct: 112 SPAPVRGGQ 120


>sp|Y524_METJA|UNCHARACTERIZED protein MJ0524|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PSPAPHS 7
P P PHS
Sbjct: 51 PKPIPHS 57


>sp|SYFA_PYRCJ|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PSPAPH 6
P+P PH
Sbjct: 213 PAPVPH 218


>sp|SYFA_PYRAR|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PSPAPH 6
P+P PH
Sbjct: 213 PAPVPH 218


>sp|SYFA_PYRAE|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PSPAPH 6
P+P PH
Sbjct: 214 PAPVPH 219


>sp|RS4E_HYPBU|SMALL ribosomal subunit protein eS4|Hyperthermus butylicus (strain DSM

Query: 1 PSPAPH 6
PSP PH
Sbjct: 32 PSPGPH 37


>sp|MALE_THELN|TREHALOSE/MALTOSE-BINDING protein MalE|Thermococcus litoralis (strain ATCC 51850

Query: 2 SPAPHSGGH 10
+P PH GH
Sbjct: 318 APLPHFPGH 326


>sp|RS7_METKA|SMALL ribosomal subunit protein uS7|Methanopyrus kandleri (strain AV19

Query: 1 PSPAPHSGG 9
P PH+GG
Sbjct: 39 PMYLPHTGG 47


>sp|PTFC_HALVD|PTS system fructose-specific EIIC component|Haloferax volcanii (strain

Query: 3 PAPHSG 8
PAPH G
Sbjct: 324 PAPHGG 329




234|SequenceR|1175|1166|QHHQVPSPAP

>sp|Y1170_METST|PUTATIVE nickel insertion protein|Methanosphaera stadtmanae (strain ATCC

Query: 1 QHHQVPSPAP 10
QH +P PAP
Sbjct: 170 QHGILPVPAP 179


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 QVPSPAP 10
Q+P+PAP
Sbjct: 520 QIPAPAP 526


>sp|RS24_PYRAR|SMALL ribosomal subunit protein eS24|Pyrobaculum arsenaticum (strain

Query: 2 HHQVPSP 8
HH+ P+P
Sbjct: 28 HHKAPTP 34


>sp|METK_THEAC|S-ADENOSYLMETHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 HQVPSP 8
HQ+P+P
Sbjct: 11 HQIPTP 16


>sp|CARA_METVS|CARBAMOYL phosphate synthase small chain|Methanococcus vannielii (strain ATCC

Query: 1 QHHQVPSPAP 10
QHH P P
Sbjct: 335 QHHPEAGPGP 344


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 1 QHHQVPS 7
QHH +PS
Sbjct: 612 QHHSIPS 618


>sp|COBS_HALLT|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 VPSPAP 10
VP+PAP
Sbjct: 52 VPAPAP 57


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 4 QVPSPA 9
Q+PSPA
Sbjct: 668 QIPSPA 673


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 4 QVPSPAP 10
QVP+P+P
Sbjct: 355 QVPTPSP 361


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 QVPSPAP 10
QVPSP P
Sbjct: 825 QVPSPLP 831


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 4 QVPSPAP 10
++P+PAP
Sbjct: 304 EIPAPAP 310


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 3 HQVPSP 8
H VPSP
Sbjct: 374 HHVPSP 379


>sp|MTTB2_METAC|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina acetivorans (strain ATCC

Query: 1 QHHQVP 6
+HH+VP
Sbjct: 466 KHHEVP 471




235|SequenceR|1180|1171|QAAQHQHHQV

>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 AAQHQHHQ 9
A QH+HHQ
Sbjct: 751 AIQHKHHQ 758


>sp|FUMC_SACS2|FUMARATE hydratase class II|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 AAQHQHHQV 10
A QH+H QV
Sbjct: 179 AFQHEHEQV 187


>sp|ATGT_METHJ|TRNA-GUANINE(15) transglycosylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 AQHQHHQV 10
A H+HH +
Sbjct: 155 ADHEHHTL 162




236|SequenceR|1185|1176|ALHLAQAAQH

>sp|ACDE_METJA|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanocaldococcus

Query: 3 HLAQAAQH 10
+LAQAA H
Sbjct: 97 YLAQAATH 104


>sp|DHYS_PYRCJ|PROBABLE deoxyhypusine synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ALHLAQAAQ 9
ALH+AQA +
Sbjct: 16 ALHVAQAYE 24




237|SequenceR|1190|1181|QQQPSALHLA

>sp|SYFB_METPE|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaerula palustris (strain ATCC

Query: 1 QQQPSALHL 9
++ P+ALHL
Sbjct: 393 ERSPTALHL 401




238|SequenceR|1195|1186|HYIASQQQPS

>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 YIASQQQPS 10
++ASQ +PS
Sbjct: 1053 FMASQMEPS 1061


>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 YIASQQQP 9
YIA+Q++P
Sbjct: 22 YIATQEEP 29




239|SequenceR|1200|1191|PALGAHYIAS

>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PALGAHYI 8
P LG HYI
Sbjct: 325 PGLGNHYI 332


>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PALGAHYI 8
P LG HY+
Sbjct: 324 PGLGDHYV 331


>sp|STOPP_PYRHO|MEMBRANE-BOUND protease PH1510|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ALGAHYIA 9
ALG+H IA
Sbjct: 103 ALGSHLIA 110


>sp|MFNA_METTH|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothermobacter

Query: 1 PALGAHYIA 9
PA+G H +A
Sbjct: 308 PAMGPHELA 316




240|SequenceR|1205|1196|MSPPTPALGA

>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MSPPTPALGA 10
++ PTP +GA
Sbjct: 299 ITSPTPTIGA 308


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PPTPAL 8
PPTPA+
Sbjct: 135 PPTPAI 140


>sp|NADE_SULTO|NH(3)-DEPENDENT NAD(+) synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PPTPAL 8
PP+PAL
Sbjct: 191 PPSPAL 196


>sp|WECC_METVS|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 4 PTPALG 9
PTPA+G
Sbjct: 90 PTPAIG 95


>sp|NADE_SULAC|NH(3)-DEPENDENT NAD(+) synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PPTPAL 8
PP+PAL
Sbjct: 191 PPSPAL 196


>sp|SYH_NATPD|HISTIDINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 PTPALG 9
PTPA+G
Sbjct: 306 PTPAVG 311


>sp|SYH_METJA|HISTIDINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PTPALG 9
PTPA+G
Sbjct: 302 PTPAVG 307


>sp|SYH_META3|HISTIDINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 PTPALG 9
PTPA+G
Sbjct: 304 PTPAVG 309


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 MSPPTPAL 8
MSPPT L
Sbjct: 310 MSPPTSGL 317


>sp|NADE_STAMF|NH(3)-DEPENDENT NAD(+) synthetase|Staphylothermus marinus (strain ATCC 43588

Query: 1 MSPPTPAL 8
+SPP P+L
Sbjct: 258 LSPPIPSL 265


>sp|SYH_SULTO|HISTIDINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PPTPALG 9
P TPA+G
Sbjct: 305 PQTPAIG 311


>sp|SYH_HALWD|HISTIDINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 PTPALG 9
PTPA+G
Sbjct: 308 PTPAVG 313


>sp|CAS5A_SACS2|CRISPR system aCascade subunit Cas5|Saccharolobus solfataricus (strain

Query: 1 MSPPTPALGA 10
+ PPT +GA
Sbjct: 30 LPPPTTLIGA 39


>sp|SYH_HALMA|HISTIDINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 PTPALG 9
PTPA+G
Sbjct: 308 PTPAVG 313


>sp|SYH_HALLT|HISTIDINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 PTPALG 9
PTPA+G
Sbjct: 312 PTPAVG 317


>sp|MFNA_METHJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanospirillum hungatei JF-1

Query: 1 MSPPTPALG 9
M+ P PALG
Sbjct: 170 MTDPIPALG 178


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 PTPALG 9
PTPA+G
Sbjct: 526 PTPAVG 531


>sp|CAS5C_SACS2|CRISPR-ASSOCIATED protein Cas5 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MSPPTPALGA 10
+ PPT +GA
Sbjct: 30 LPPPTTLIGA 39


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PPTPALG 9
PPTP++G
Sbjct: 528 PPTPSIG 534


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PPTPALG 9
PPTP++G
Sbjct: 528 PPTPSIG 534


>sp|TOP6B_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 1 MSPPTPAL 8
MSPPT L
Sbjct: 310 MSPPTDCL 317


>sp|SYH_HALSA|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 PTPALG 9
PTPA+G
Sbjct: 306 PTPAVG 311


>sp|SYH_HALS3|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 PTPALG 9
PTPA+G
Sbjct: 306 PTPAVG 311


>sp|TOP6B_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MSPPTPAL 8
MSPPT L
Sbjct: 310 MSPPTDCL 317




241|SequenceR|1210|1201|NSAPTMSPPT

>sp|HEM3_METBF|PROBABLE porphobilinogen deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 4 PTMSPPT 10
PT+ PPT
Sbjct: 80 PTIRPPT 86




242|SequenceR|1215|1206|QPSQTNSAPT

>sp|BTUFA_HALSA|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 700922

Query: 1 QPSQTN 6
QPSQTN
Sbjct: 106 QPSQTN 111


>sp|BTUFA_HALS3|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 29341

Query: 1 QPSQTN 6
QPSQTN
Sbjct: 106 QPSQTN 111




243|SequenceR|1220|1211|APFSNQPSQT

>sp|RRP42_AERPE|EXOSOME complex component Rrp42|Aeropyrum pernix (strain ATCC 700893

Query: 1 APFSNQPSQ 9
APF + P+Q
Sbjct: 73 APFKDTPNQ 81




244|SequenceR|1225|1216|VTQQAAPFSN

***** No hits found ******


245|SequenceR|1230|1221|PHITFVTQQA

>sp|Y421_METJA|UNCHARACTERIZED protein MJ0421|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PHITFVTQQA 10
PH+TF T+ A
Sbjct: 318 PHMTFATEHA 327


>sp|SYT_META3|THREONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PHITFVTQQ 9
PH+ F+T++
Sbjct: 207 PHVKFITEK 215


>sp|Y819_PYRHO|UNCHARACTERIZED methyltransferase PH0819|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PHITFVTQ 8
PH+TF +
Sbjct: 103 PHVTFTPE 110




246|SequenceR|1235|1226|PQVHSPHITF

>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 PQVHSPHI 8
P++ +PHI
Sbjct: 30 PEIETPHI 37


>sp|LEUC1_ARCFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 PQVHSPH 7
PQV +PH
Sbjct: 268 PQVAAPH 274


>sp|MOAE_HALVD|PROBABLE molybdopterin synthase|Haloferax volcanii (strain ATCC 29605

Query: 4 HSPHITF 10
H PH+T
Sbjct: 125 HEPHVTL 131


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 2 QVHSPHITF 10
Q S HITF
Sbjct: 29 QTSSKHITF 37


>sp|SYW_METAC|TRYPTOPHAN--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PQVHSPHI 8
P++ SPH+
Sbjct: 33 PEIPSPHM 40


>sp|SYW_ARCFU|TRYPTOPHAN--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PQVHSPHI 8
P++ +PHI
Sbjct: 31 PEIDNPHI 38


>sp|UPPS_THEKO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermococcus

Query: 4 HSPHITF 10
H PHI F
Sbjct: 8 HIPHILF 14


>sp|VHCA_METVO|F420-NON-REDUCING hydrogenase vhc subunit A|Methanococcus voltae

Query: 1 PQVHSPHI 8
P+V PHI
Sbjct: 424 PEVAKPHI 431




247|SequenceR|1240|1231|PNTYAPQVHS

>sp|RL44E_NATPD|LARGE ribosomal subunit protein eL42|Natronomonas pharaonis (strain

Query: 2 NTYAPQVHS 10
NTY P HS
Sbjct: 8 NTYCPHCHS 16


>sp|HMGCS_HALVD|HYDROXYMETHYLGLUTARYL-COA synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 PNTYAP 6
PNT+AP
Sbjct: 21 PNTFAP 26


>sp|QUEC_METLZ|7-CYANO-7-DEAZAGUANINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PNTYAP 6
PNTY P
Sbjct: 93 PNTYVP 98


>sp|PURK_SACS2|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide synthase|Saccharolobus solfataricus (strain ATCC

Query: 2 NTYAPQVHS 10
N +AP+VH+
Sbjct: 256 NEFAPRVHN 264


>sp|FENR_IGNH4|FERREDOXIN--NADP reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PNTYAPQVH 9
PN AP VH
Sbjct: 123 PNEDAPNVH 131


>sp|PSB_NATMM|PROTEASOME subunit beta|Natrialba magadii (strain ATCC 43099

Query: 1 PNTYAPQVHS 10
PN Y P+V S
Sbjct: 21 PNPYEPEVGS 30


>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 2 NTYAPQVH 9
N YAP+ H
Sbjct: 329 NKYAPKYH 336


>sp|PSB_HALSA|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 1 PNTYAPQVHS 10
PN Y P+V S
Sbjct: 21 PNPYEPEVGS 30


>sp|PSB_HALS3|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 29341

Query: 1 PNTYAPQVHS 10
PN Y P+V S
Sbjct: 21 PNPYEPEVGS 30


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 NTYAPQV 8
NT+APQV
Sbjct: 481 NTHAPQV 487


>sp|QUEC_METPE|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PNTYAP 6
PNTY P
Sbjct: 92 PNTYVP 97


>sp|PSB1_HALTV|PROTEASOME subunit beta 1|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 PNTYAPQVHS 10
PN Y P++ S
Sbjct: 21 PNPYEPEIGS 30


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 3 TYAPQVHS 10
TYAP++++
Sbjct: 683 TYAPRIYA 690


>sp|PNPH_KORCO|PROBABLE 6-oxopurine nucleoside phosphorylase|Korarchaeum cryptofilum

Query: 1 PNTYAPQVHS 10
P TY P++ +
Sbjct: 136 PYTYCPEIRA 145


>sp|RPO11_PICTO|DNA-DIRECTED RNA polymerase subunit Rpo11|Picrophilus torridus (strain ATCC

Query: 1 PNTYAPQVH 9
PN PQ+H
Sbjct: 51 PNLDNPQIH 59




248|SequenceR|1245|1236|HAMHPPNTYA

>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 2 AMHPPNTY 9
A+HPP T+
Sbjct: 86 AVHPPGTW 93


>sp|Y575_METJA|UNCHARACTERIZED protein MJ0575|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HAMHPPNTY 9
+ HP NTY
Sbjct: 65 YTQHPDNTY 73


>sp|MPTA_THEVO|GTP cyclohydrolase MptA|Thermoplasma volcanium (strain ATCC 51530

Query: 2 AMHPPNTYA 10
++HP N YA
Sbjct: 261 SIHPHNAYA 269


>sp|MPTA_THEAC|GTP cyclohydrolase MptA|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 AMHPPNTYA 10
++HP N YA
Sbjct: 263 SIHPHNAYA 271


>sp|DTDA_PYRCJ|D-AMINOACYL-TRNA deacylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 HPPNTYA 10
HPPNT A
Sbjct: 123 HPPNTSA 129


>sp|MALE_THELN|TREHALOSE/MALTOSE-BINDING protein MalE|Thermococcus litoralis (strain ATCC 51850

Query: 1 HAMHPPNTY 9
+ + PPNTY
Sbjct: 266 YKISPPNTY 274


>sp|YD5A_METJA|UNCHARACTERIZED protein MJ1351.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HAMHPPNTYA 10
HA +P NT A
Sbjct: 171 HARYPTNTRA 180


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HAMHPPNTYA 10
+A HP +TY+
Sbjct: 498 NAFHPIDTYS 507


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 HAMHPPNTYA 10
+A HP +TY+
Sbjct: 498 NAFHPIDTYS 507


>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 1 HAMHPPNTY 9
+A HP +TY
Sbjct: 508 NAFHPTDTY 516


>sp|DCD_THEKO|DCTP deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 PPNTYA 10
PP TYA
Sbjct: 53 PPKTYA 58


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HAMHPPNTY 9
+A HP +TY
Sbjct: 504 YAYHPVDTY 512


>sp|MPTA_PICTO|GTP cyclohydrolase MptA|Picrophilus torridus (strain ATCC 700027

Query: 2 AMHPPNTYA 10
++HP N YA
Sbjct: 249 SIHPHNAYA 257


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 1 HAMHPPNTY 9
+A HP +TY
Sbjct: 498 NAFHPVDTY 506


>sp|DTDA_PYRNV|D-AMINOACYL-TRNA deacylase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 HPPNTYA 10
HPPNT A
Sbjct: 123 HPPNTSA 129


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 MHPPN 7
+HPPN
Sbjct: 385 LHPPN 389


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 AMHPPNTYA 10
A H P+TYA
Sbjct: 308 AEHLPDTYA 316


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 PPNTY 9
PPNTY
Sbjct: 258 PPNTY 262


>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HAMHPPNTY 9
+A HP +TY
Sbjct: 507 NAFHPVDTY 515




249|SequenceR|1250|1241|HAQPVHAMHP

>sp|CHEB1_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina mazei

Query: 2 AQPVHAMHP 10
+QPVHA+ P
Sbjct: 259 SQPVHAVMP 267


>sp|CHEB1_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina

Query: 2 AQPVHAMHP 10
+QPVHA+ P
Sbjct: 251 SQPVHAVMP 259


>sp|CCA_METBF|CCA-ADDING enzyme|Methanosarcina barkeri (strain Fusaro /

Query: 1 HAQPVHAMHP 10
HA+ HA HP
Sbjct: 104 HAEDRHAEHP 113


>sp|Y623_METJA|PROBABLE metallophosphoesterase MJ0623|Methanocaldococcus jannaschii

Query: 1 HAQPVHAMH 9
HA P AMH
Sbjct: 16 HAHPKEAMH 24


>sp|CCA_METAC|CCA-ADDING enzyme|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HAQPVHAMHP 10
HA+ HA HP
Sbjct: 104 HAEDRHAEHP 113


>sp|SYR_PYRAE|ARGININE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 AQPVHAMH 9
A PVH +H
Sbjct: 120 ANPVHPLH 127


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 AQPVHAMH 9
A PVH +H
Sbjct: 129 ANPVHPLH 136


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 AQPVHAMH 9
A PVH +H
Sbjct: 127 ANPVHPLH 134


>sp|HEM1_CENSY|GLUTAMYL-TRNA reductase|Cenarchaeum symbiosum (strain A)

Query: 1 HAQPVHAM 8
H PVHA+
Sbjct: 13 HNSPVHAL 20


>sp|COBD_METTH|PROBABLE cobalamin biosynthesis protein CobD|Methanothermobacter

Query: 2 AQPVHAMHP 10
+P H +HP
Sbjct: 18 GEPPHRLHP 26


>sp|RL30_METAR|LARGE ribosomal subunit protein uL30|Methanocella arvoryzae (strain DSM

Query: 3 QPVHAMHP 10
+PV MHP
Sbjct: 113 KPVFRMHP 120


>sp|FWDG_METJA|POLYFERREDOXIN protein FwdG|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PVHAMHP 10
PV+A HP
Sbjct: 24 PVNAKHP 30


>sp|LYSY_THEKO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 AQPVHAMHP 10
Q VH +HP
Sbjct: 39 GQKVHKVHP 47


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AQPVHAMHP 10
A +HA HP
Sbjct: 451 ATAIHATHP 459


>sp|ARGC_METAR|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 AQPVHAMHP 10
QPV +HP
Sbjct: 39 GQPVDTVHP 47


>sp|LYSY_AERPE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 AQPVHAMHP 10
+PVH HP
Sbjct: 42 GKPVHTAHP 50




250|SequenceR|1255|1246|MGSQVHAQPV

>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MGSQVHAQPV 10
MG VH PV
Sbjct: 564 MGFTVHVSPV 573


>sp|SUCD1_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Archaeoglobus fulgidus (strain

Query: 2 GSQVHAQPV 10
GS+VH PV
Sbjct: 48 GSEVHGIPV 56


>sp|GLYA_NITMS|SERINE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 MGSQVHAQPV 10
+GS+ H +P+
Sbjct: 249 LGSEKHEEPI 258


>sp|RL22_METBF|LARGE ribosomal subunit protein uL22|Methanosarcina barkeri (strain

Query: 1 MGSQVHAQP 9
MGS++H P
Sbjct: 19 MGSELHISP 27


>sp|RL22_METBU|LARGE ribosomal subunit protein uL22|Methanococcoides burtonii (strain

Query: 1 MGSQVHAQP 9
MGS++H P
Sbjct: 19 MGSELHISP 27


>sp|RL22_METMA|LARGE ribosomal subunit protein uL22|Methanosarcina mazei (strain ATCC

Query: 1 MGSQVHAQP 9
MGS++H P
Sbjct: 19 MGSELHISP 27


>sp|RL22_METAC|LARGE ribosomal subunit protein uL22|Methanosarcina acetivorans (strain

Query: 1 MGSQVHAQP 9
MGS++H P
Sbjct: 19 MGSELHISP 27


>sp|Y3270_HALS3|UNCHARACTERIZED solute-binding protein OE_3270R|Halobacterium salinarum (strain

Query: 2 GSQVHAQPV 10
G+++H +P+
Sbjct: 247 GTRIHGRPI 255


>sp|Y1595_HALSA|UNCHARACTERIZED solute-binding protein VNG_1595C|Halobacterium salinarum (strain

Query: 2 GSQVHAQPV 10
G+++H +P+
Sbjct: 247 GTRIHGRPI 255




251|SequenceR|1260|1251|PHSPVMGSQV

>sp|RL18_AERPE|LARGE ribosomal subunit protein uL18|Aeropyrum pernix (strain ATCC 700893

Query: 2 HSPVMGSQV 10
H PV GS+V
Sbjct: 109 HKPVKGSRV 117


>sp|RL18_PYRIL|LARGE ribosomal subunit protein uL18|Pyrobaculum islandicum (strain DSM

Query: 2 HSPVMGSQV 10
H PV GS+V
Sbjct: 108 HRPVAGSRV 116


>sp|RL18_PYRNV|LARGE ribosomal subunit protein uL18|Pyrobaculum neutrophilum (strain DSM

Query: 2 HSPVMGSQV 10
H PV GS+V
Sbjct: 108 HRPVAGSRV 116


>sp|RL18_METKA|LARGE ribosomal subunit protein uL18|Methanopyrus kandleri (strain AV19 /

Query: 2 HSPVMGSQV 10
H PV GS+V
Sbjct: 112 HRPVRGSRV 120


>sp|RL18_ARCFU|LARGE ribosomal subunit protein uL18|Archaeoglobus fulgidus (strain ATCC

Query: 2 HSPVMGSQV 10
H+P GS+V
Sbjct: 110 HTPTRGSRV 118




252|SequenceR|1265|1256|PAHATPHSPV

>sp|PYLS_METBF|PYRROLYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PAHATPHSPV 10
PA +TP+SPV
Sbjct: 137 PAKSTPNSPV 146


>sp|SURE_METAR|5'-NUCLEOTIDASE SurE|Methanocella arvoryzae (strain DSM 22066

Query: 1 PAHATPHSPV 10
PA ATP +PV
Sbjct: 180 PAGATPETPV 189


>sp|ASSY_METTH|ARGININOSUCCINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PAHATPHSP 9
P H TP P
Sbjct: 207 PIHETPEDP 215


>sp|SPEE_THEAC|POLYAMINE aminopropyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 PAHATPHSP 9
P H TP P
Sbjct: 72 PYHLTPRPP 80


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 TPHSPV 10
TPH P+
Sbjct: 17 TPHGPI 22




253|SequenceR|1270|1261|TMLMMPAHAT

>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 4 MMPAHA 9
M+PAHA
Sbjct: 269 MLPAHA 274




254|SequenceR|1275|1266|GPPQTTMLMM

>sp|SYK_CENSY|LYSINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 GPPQTTMLMM 10
G PQ+ +L+M
Sbjct: 313 GTPQSILLLM 322


>sp|SYK_CENSM|LYSINE--TRNA ligase|Cenarchaeum symbiosum

Query: 1 GPPQTTMLMM 10
G PQ+ +L+M
Sbjct: 312 GTPQSILLLM 321


>sp|PANB_NITMS|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 PQTTML 8
PQTTML
Sbjct: 141 PQTTML 146


>sp|Y1438_METS3|MEMO1 family protein Msm_1438|Methanobrevibacter smithii (strain ATCC

Query: 1 GPPQTTMLM 9
GP TTM++
Sbjct: 238 GPVMTTMIL 246




255|SequenceR|1280|1271|AAQPGGPPQT

>sp|DPHB_METKA|DIPHTHINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 QPGGPPQ 9
+PG PPQ
Sbjct: 227 EPGEPPQ 233


>sp|FRHG_METVO|COENZYME F420 hydrogenase subunit gamma|Methanococcus voltae

Query: 2 AQPGGPPQT 10
A PG PP T
Sbjct: 137 ALPGCPPST 145


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AAQPGGPP 8
A P GPP
Sbjct: 99 APNPNGPP 106


>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 3 QPGGPPQ 9
QP GPP+
Sbjct: 18 QPEGPPE 24


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 AAQPGGPP 8
A P GPP
Sbjct: 109 APNPNGPP 116


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 AAQPGGPP 8
A P GPP
Sbjct: 106 APNPNGPP 113




256|SequenceR|1285|1276|ASQALAAQPG

>sp|SPEH_METMP|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain DSM

Query: 2 SQALAAQPG 10
SQAL QPG
Sbjct: 17 SQALDDQPG 25


>sp|RPO5_THESM|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermococcus sibiricus (strain DSM

Query: 1 ASQALAAQPG 10
A QAL A+PG
Sbjct: 49 AVQALDAKPG 58


>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 1 ASQALAAQPG 10
ASQALA + G
Sbjct: 543 ASQALAEERG 552




257|SequenceR|1290|1281|PIPQLASQAL

***** No hits found ******


258|SequenceR|1295|1286|ATTSVPIPQL

>sp|NIFH_METMJ|NITROGENASE iron protein|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TTSVPIP 8
TTS+P P
Sbjct: 250 TTSIPTP 256




259|SequenceR|1300|1291|MYPFHATTSV

>sp|RS17_ARCFU|SMALL ribosomal subunit protein uS17|Archaeoglobus fulgidus (strain

Query: 3 PFHATTSV 10
PFH T SV
Sbjct: 21 PFHGTLSV 28


>sp|RS17_METVA|SMALL ribosomal subunit protein uS17|Methanococcus vannielii

Query: 3 PFHATTSV 10
PFH T SV
Sbjct: 21 PFHGTLSV 28


>sp|RS17_METMP|SMALL ribosomal subunit protein uS17|Methanococcus maripaludis (strain

Query: 3 PFHATTSV 10
PFH T SV
Sbjct: 21 PFHGTLSV 28


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 2 YPFHA 6
YPFHA
Sbjct: 91 YPFHA 95


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 2 YPFHA 6
YPFHA
Sbjct: 91 YPFHA 95


>sp|RS17_METBF|SMALL ribosomal subunit protein uS17|Methanosarcina barkeri (strain

Query: 3 PFHATTSV 10
PFH T SV
Sbjct: 22 PFHGTLSV 29


>sp|HISX_ARCFU|HISTIDINOL dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MYPFHATTSV 10
+Y FH TSV
Sbjct: 79 IYRFHYVTSV 88


>sp|Y605_ARCFU|UNCHARACTERIZED protein AF_0605|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YPFHATTS 9
YPFH T +
Sbjct: 28 YPFHKTIA 35


>sp|DMSR_HALVD|DIMETHYL sulfoxide reductase transcriptional activator|Haloferax volcanii

Query: 5 HATTSV 10
HATTSV
Sbjct: 72 HATTSV 77




260|SequenceR|1305|1296|VSPHTMYPFH

>sp|GVPE2_HALSA|TRANSCRIPTIONAL activator GvpE2|Halobacterium salinarum (strain ATCC 700922

Query: 1 VSPHTMYP 8
VSP TMYP
Sbjct: 118 VSPGTMYP 125


>sp|END4_METST|PROBABLE endonuclease 4|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PHTMYPFH 10
P+ MY FH
Sbjct: 100 PNNMYNFH 107


>sp|SRP19_METBF|SIGNAL recognition particle 19 kDa|Methanosarcina barkeri (strain Fusaro

Query: 1 VSPHTMYP 8
V PH YP
Sbjct: 53 VEPHKAYP 60


>sp|GLCAE_SULTO|D-GLUCOSAMINE-6-PHOSPHATE 4-epimerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SPHTMYP 8
SP+T YP
Sbjct: 224 SPYTFYP 230


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 3 PHTMYPFH 10
P TM P H
Sbjct: 168 PETMNPLH 175


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VSPHTMYP 8
V+P+T YP
Sbjct: 406 VNPNTKYP 413


>sp|GVPE_HALMT|TRANSCRIPTIONAL activator GvpE|Haloferax mediterranei (strain ATCC 33500

Query: 1 VSPHTMYP 8
+SP T+YP
Sbjct: 115 LSPGTVYP 122


>sp|GVPE1_HALSA|TRANSCRIPTIONAL activator GvpE1|Halobacterium salinarum (strain ATCC 700922

Query: 1 VSPHTMYP 8
+SP T+YP
Sbjct: 115 LSPGTVYP 122


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VSPHTMYPFH 10
V+PH FH
Sbjct: 211 VNPHARVEFH 220


>sp|PYRC_METKA|DIHYDROOROTASE kandleri (strain AV19 /

Query: 3 PHTMYPF 9
PH YPF
Sbjct: 67 PHPDYPF 73




261|SequenceR|1313|1301|LQQQHHAQVSPHT

>sp|KAE1_PYRNV|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum

Query: 4 QHHAQVSP 11
+HHA+V+P
Sbjct: 46 EHHARVAP 53


>sp|PYRH_METB6|URIDYLATE kinase|Methanoregula boonei (strain DSM 21154

Query: 4 QHHAQVSP 11
QHHA ++P
Sbjct: 157 QHHATLTP 164


>sp|KAE1_THEPD|TRNA N6-adenosine threonylcarbamoyltransferase|Thermofilum pendens

Query: 4 QHHAQVSP 11
+HH++V+P
Sbjct: 53 EHHSRVAP 60


>sp|KAE1_SULTO|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfurisphaera tokodaii

Query: 4 QHHAQVSP 11
+HH++V+P
Sbjct: 49 RHHSEVAP 56


>sp|DNAG_METTP|DNA primase DnaG|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 HHAQVSP 11
HHA+++P
Sbjct: 312 HHAEIAP 318


>sp|GLYA_METHJ|SERINE hydroxymethyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 6 HAQVSPHT 13
HA V PH+
Sbjct: 86 HANVQPHS 93


>sp|GLYA_METPE|SERINE hydroxymethyltransferase|Methanosphaerula palustris (strain ATCC

Query: 6 HAQVSPHT 13
HA V PH+
Sbjct: 86 HANVQPHS 93


>sp|FWDB_METJA|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanocaldococcus

Query: 6 HAQVSPH 12
H QV PH
Sbjct: 202 HLQVEPH 208




THE END