AT1A3_HUMAN Blast Output
Archaea
1|Sequence|1|10|MGDKKDDKDS

>sp|DGGGP_METST|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GDKKDD 7
GDKK+D
Sbjct: 176 GDKKED 181


>sp|CAS6L_PYRFU|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6|Pyrococcus

Query: 1 MGDKKDDKD 9
MGD +DKD
Sbjct: 172 MGDLPEDKD 180




2|Sequence|6|15|DDKDSPKKNK

>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 2 DKDSPKK 8
DK+ PKK
Sbjct: 394 DKEDPKK 400


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus

Query: 1 DDKDSPK 7
DD DSPK
Sbjct: 9 DDTDSPK 15




3|Sequence|11|20|PKKNKGKERR

>sp|LYEL_HALJT|LYCOPENE elongase/hydratase|Haloarcula japonica (strain ATCC 49778

Query: 1 PKKNKGKE 8
PKK+ G+E
Sbjct: 89 PKKDDGRE 96


>sp|MDH_SULAC|MALATE dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PKKNKG 6
PKKNKG
Sbjct: 107 PKKNKG 112


>sp|TRMY_META3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus aeolicus

Query: 2 KKNKGKE 8
KKN+GKE
Sbjct: 120 KKNEGKE 126




4|Sequence|16|25|GKERRDLDDL

>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 KERRDLDDL 10
KE+RDLD L
Sbjct: 553 KEQRDLDRL 561


>sp|PSTB_METHJ|PHOSPHATE import ATP-binding protein PstB|Methanospirillum hungatei JF-1

Query: 2 KERRDLDDL 10
K +RDLD++
Sbjct: 117 KNKRDLDEI 125


>sp|CBIJ_METJA|COBALT-PRECORRIN-6A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKERRDLDDL 10
GK+ RDL DL
Sbjct: 16 GKKLRDLGDL 25


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 ERRDLDDL 10
RRDLDD+
Sbjct: 451 SRRDLDDI 458


>sp|UBIX_METTH|FLAVIN prenyltransferase UbiX|Methanothermobacter thermautotrophicus

Query: 2 KERRDL 7
KERRDL
Sbjct: 115 KERRDL 120


>sp|COFC_METB6|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 GKERRDLDDL 10
GK R+ L+DL
Sbjct: 182 GKSRKYLEDL 191


>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 1 GKERRDLDD 9
G+ER D DD
Sbjct: 165 GRERPDTDD 173




5|Sequence|21|30|DLDDLKKEVA

>sp|Y078_THEAC|UPF0284 protein Ta0078|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DLDDLKKEVA 10
D D+LKK+VA
Sbjct: 185 DPDNLKKKVA 194


>sp|GCSPA_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 1 DLDDLKKEV 9
DL+DLK++V
Sbjct: 194 DLEDLKEKV 202


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 DLDDLKKEVA 10
+LDDL+K++A
Sbjct: 494 ELDDLQKKIA 503


>sp|GATD_NANEQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DLDDLKKEV 9
DLD +KKE+
Sbjct: 380 DLDGIKKEM 388


>sp|Y1571_AERPE|UNCHARACTERIZED protein APE_1571.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 DLDDLKKE 8
DL+DL++E
Sbjct: 273 DLEDLREE 280


>sp|TMPS_METJA|THYMIDYLATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LDDLKKEVA 10
+DDLK+E+A
Sbjct: 212 IDDLKEEIA 220


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 2 LDDLKKEVA 10
+DDL +EVA
Sbjct: 203 MDDLTREVA 211


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 DDLKKEVA 10
+DLKK++A
Sbjct: 589 EDLKKDIA 596


>sp|HIS2_HALMA|PHOSPHORIBOSYL-ATP pyrophosphatase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DLDDLKKEVA 10
D+DDL+ E+A
Sbjct: 86 DIDDLRAELA 95


>sp|Y1502_ARCFU|UNCHARACTERIZED protein AF_1502|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LDDLKKEVA 10
LD+LKKE+
Sbjct: 8 LDELKKEIG 16


>sp|Y958_METJA|UNCHARACTERIZED protein MJ0958|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DDLKKEV 9
DD+KKE+
Sbjct: 390 DDIKKEL 396


>sp|Y138_METJA|PUTATIVE glutamine amidotransferase-like protein MJ0138|Methanocaldococcus

Query: 3 DDLKKEV 9
DDLKKE+
Sbjct: 55 DDLKKEI 61


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 LDDLKKEV 9
++DLKKEV
Sbjct: 12 IEDLKKEV 19


>sp|SYP_THEVO|PROLINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LDDLKKE 8
LDD KKE
Sbjct: 402 LDDFKKE 408


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 3 DDLKKEV 9
DD+KKE+
Sbjct: 655 DDVKKEI 661


>sp|PELO_METTP|PROTEIN pelota homolog|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LDDLKKEVA 10
+DDL KE+A
Sbjct: 258 MDDLMKEIA 266


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 3 DDLKKEV 9
DD+KKE+
Sbjct: 655 DDVKKEI 661


>sp|GCSPA_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 1 DLDDLKKEV 9
DL+DLK ++
Sbjct: 204 DLEDLKNKI 212


>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DLDDLKKEVA 10
D+DDLK+ +
Sbjct: 216 DIDDLKERLG 225


>sp|EF1B_METTH|ELONGATION factor 1-beta|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DLDDLKKEV 9
DL+ LKKE+
Sbjct: 18 DLEALKKEI 26




6|Sequence|26|35|KKEVAMTEHK

***** No hits found ******


7|Sequence|31|40|MTEHKMSVEE

>sp|ARCH_SACS2|PROTEIN archease|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MTEHKMSVEE 10
MT H++S+E+
Sbjct: 117 MTYHQLSIEK 126


>sp|ARCH_SACI7|PROTEIN archease|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 MTEHKMSVEE 10
MT H++S+E+
Sbjct: 117 MTYHQLSIEK 126


>sp|Y1384_THEVO|PROTEIN TV1384|Thermoplasma volcanium (strain ATCC 51530

Query: 2 TEHKMSVEE 10
TE++MS EE
Sbjct: 150 TEYRMSAEE 158


>sp|ARCH_SACI1|PROTEIN archease|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 MTEHKMSVEE 10
MT H++S+E+
Sbjct: 117 MTYHQLSIEK 126


>sp|ARCH_SACI6|PROTEIN archease|Saccharolobus islandicus (strain M.16.4 /

Query: 1 MTEHKMSVEE 10
MT H++S+E+
Sbjct: 117 MTYHQLSIEK 126


>sp|ARCH_SACI4|PROTEIN archease|Saccharolobus islandicus (strain M.14.25 /

Query: 1 MTEHKMSVEE 10
MT H++S+E+
Sbjct: 117 MTYHQLSIEK 126


>sp|ARCH_SACI3|PROTEIN archease|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 MTEHKMSVEE 10
MT H++S+E+
Sbjct: 117 MTYHQLSIEK 126


>sp|ARCH_SACI2|PROTEIN archease|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 MTEHKMSVEE 10
MT H++S+E+
Sbjct: 117 MTYHQLSIEK 126




8|Sequence|36|45|MSVEEVCRKY

>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 3 VEEVCRKY 10
+E+VCRKY
Sbjct: 511 MEKVCRKY 518


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 3 VEEVCRKY 10
V E+CRKY
Sbjct: 315 VIEICRKY 322


>sp|DHYS1_METAC|PROBABLE deoxyhypusine synthase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 MSVEEVCRKY 10
MSV+E+ R+Y
Sbjct: 23 MSVDELVREY 32


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 5 EVCRKY 10
E+CRKY
Sbjct: 317 EICRKY 322


>sp|PGK_NATPD|PHOSPHOGLYCERATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SVEEVCRK 9
+VEE+CR+
Sbjct: 42 TVEELCRR 49


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 5 EVCRKY 10
E+CRKY
Sbjct: 317 EICRKY 322


>sp|DHYS_SULAC|PROBABLE deoxyhypusine synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VEEVCRKY 10
+EEV RKY
Sbjct: 139 IEEVVRKY 146


>sp|DCDA_THEAC|DIAMINOPIMELATE decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MSVEEVCRKY 10
MS++E+ +KY
Sbjct: 18 MSIDEMAKKY 27


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 SVEEVCRKY 10
+VEEVC+ +
Sbjct: 307 NVEEVCKAF 315


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 2 SVEEVCRKY 10
+VEEVC+ +
Sbjct: 307 NVEEVCKAF 315


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 2 SVEEVCRKY 10
+VEEVC+ +
Sbjct: 307 NVEEVCKAF 315


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 2 SVEEVCRKY 10
+VEEVC+ +
Sbjct: 307 NVEEVCKAF 315


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 SVEEVCRKY 10
+VEEVC+ +
Sbjct: 307 NVEEVCKAF 315


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 SVEEVCRKY 10
+VEEVC+ +
Sbjct: 307 NVEEVCKAF 315


>sp|DHYS_METJA|PROBABLE deoxyhypusine synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MSVEEVCRKY 10
+S+EE+ +KY
Sbjct: 22 ISLEEIIKKY 31


>sp|PYRDB_SACS2|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Saccharolobus solfataricus

Query: 3 VEEVCRKY 10
VE +C KY
Sbjct: 27 VETICEKY 34


>sp|DHYS_METTE|PROBABLE deoxyhypusine synthase|Methanosarcina thermophila

Query: 1 MSVEEVCRKY 10
M+V+E+ R+Y
Sbjct: 23 MTVDELVREY 32


>sp|CHEB_METBF|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanosarcina barkeri

Query: 4 EEVCRK 9
EE+CRK
Sbjct: 123 EEICRK 128


>sp|DHYS_SULTO|PROBABLE deoxyhypusine synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VEEVCRKY 10
+E+V RKY
Sbjct: 139 IEDVVRKY 146


>sp|CHEB2_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina

Query: 4 EEVCRK 9
EE+CRK
Sbjct: 120 EEICRK 125


>sp|Y1739_ARCFU|UNCHARACTERIZED protein AF_1739|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SVEEVCRKY 10
SVEE C+++
Sbjct: 70 SVEEFCKEF 78


>sp|RS10_METHJ|SMALL ribosomal subunit protein uS10|Methanospirillum hungatei JF-1

Query: 3 VEEVCRK 9
VEEVC K
Sbjct: 16 VEEVCEK 22


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 MSVEEVCRKY 10
M+VEE+ KY
Sbjct: 1 MNVEELIMKY 10


>sp|SPSS2_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VEEVCRKY 10
V E+CR Y
Sbjct: 173 VAEICRDY 180


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 4 EEVCRKY 10
EE+CR Y
Sbjct: 15 EELCRLY 21


>sp|RS4_METJA|SMALL ribosomal subunit protein uS4|Methanocaldococcus jannaschii

Query: 4 EEVCRKY 10
+E+CRKY
Sbjct: 28 KELCRKY 34




9|Sequence|41|50|VCRKYNTDCV

>sp|SURE_AERPE|5'-NUCLEOTIDASE SurE|Aeropyrum pernix (strain ATCC 700893

Query: 2 CRKYNTDCV 10
CR+ TDC+
Sbjct: 131 CREEETDCL 139


>sp|DCDB_METM6|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C6 /

Query: 4 KYNTDCV 10
KYN DCV
Sbjct: 85 KYNVDCV 91


>sp|DCDB_METM7|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C7 /

Query: 4 KYNTDCV 10
KYN DC+
Sbjct: 85 KYNVDCI 91


>sp|TOP3_SACS2|DNA topoisomerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VCRKYN 6
+CRKYN
Sbjct: 33 LCRKYN 38


>sp|METK_METMA|S-ADENOSYLMETHIONINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VCRKYNTDC 9
+CR+Y T C
Sbjct: 46 LCREYITKC 54


>sp|PURA_METM5|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C5 /

Query: 4 KYNTDC 9
KY+TDC
Sbjct: 287 KYDTDC 292


>sp|CAS1A_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 CRKYNTDCV 10
C K N DC+
Sbjct: 13 CYKRNCDCI 21


>sp|DCDB_METMP|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain DSM

Query: 3 RKYNTDCV 10
KYN DCV
Sbjct: 84 EKYNVDCV 91


>sp|CBID_METHJ|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 2 CRKYNTD 8
CRKY+ D
Sbjct: 93 CRKYSGD 99


>sp|RNP3_METVS|RIBONUCLEASE P protein component 3|Methanococcus vannielii (strain ATCC 35089

Query: 1 VCRKYNTDCV 10
+C+KY+T V
Sbjct: 161 LCKKYDTPVV 170


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 1 VCRKYN 6
VCRKY+
Sbjct: 514 VCRKYS 519


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 CRKYNTDCV 10
CR++N D V
Sbjct: 96 CREFNPDHV 104


>sp|DNLI_META3|DNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 RKYNTDCV 10
RKYN D +
Sbjct: 325 RKYNIDSI 332


>sp|RS5_METVS|SMALL ribosomal subunit protein uS5|Methanococcus vannielii (strain

Query: 3 RKYNTD 8
RK+NTD
Sbjct: 9 RKFNTD 14


>sp|RS5_METVA|SMALL ribosomal subunit protein uS5|Methanococcus vannielii

Query: 3 RKYNTD 8
RK+NTD
Sbjct: 9 RKFNTD 14


>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VCRKYNTDCV 10
VC+ + DCV
Sbjct: 174 VCKYNDLDCV 183


>sp|GCH3_NATPD|GTP cyclohydrolase III|Natronomonas pharaonis (strain ATCC 35678

Query: 2 CRKYNTD 8
CR+ NTD
Sbjct: 242 CREENTD 248


>sp|KHSE_SULTO|HOMOSERINE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VCRKYNTDC 9
VC+ Y +C
Sbjct: 281 VCKAYGYEC 289


>sp|PYRE_METLZ|OROTATE phosphoribosyltransferase|Methanocorpusculum labreanum (strain

Query: 1 VCRKYNTDCV 10
V +KY+ +C+
Sbjct: 51 VAKKYDFECI 60


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VCRKYNTD 8
VC KY D
Sbjct: 280 VCSKYTAD 287


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CRKYNT 7
C++YNT
Sbjct: 1050 CKEYNT 1055


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 1 VCRKYNTD 8
VC YN D
Sbjct: 457 VCTPYNAD 464


>sp|DCDB_METM5|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C5 /

Query: 4 KYNTDCV 10
KYN +CV
Sbjct: 85 KYNVNCV 91


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 RKYNTDCV 10
RKY TD +
Sbjct: 551 RKYGTDLI 558


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 1 VCRKY 5
+CRKY
Sbjct: 318 ICRKY 322


>sp|AMZA_ARCFU|ARCHAEMETZINCIN fulgidus (strain ATCC 49558

Query: 3 RKYNTDCV 10
R+YN+ C+
Sbjct: 48 RQYNSTCI 55




10|Sequence|46|55|NTDCVQGLTH

>sp|AATE_METBU|A-TYPE ATP synthase subunit E|Methanococcoides burtonii (strain DSM 6242

Query: 1 NTDCVQGLT 9
N DC+ GLT
Sbjct: 140 NIDCIGGLT 148


>sp|GATD_NANEQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 TDCVQGLTH 10
T C+ G+TH
Sbjct: 335 TQCIYGITH 343


>sp|PHNC2_HALWD|PHOSPHONATES import ATP-binding protein PhnC|Haloquadratum walsbyi (strain DSM

Query: 4 CVQGLTH 10
CV GLTH
Sbjct: 47 CVNGLTH 53


>sp|Y612_METJA|PROBABLE arogenate/prephenate dehydrogenase|Methanocaldococcus jannaschii

Query: 5 VQGLTH 10
VQGLTH
Sbjct: 179 VQGLTH 184


>sp|FUCA_METM7|L-FUCULOSE phosphate aldolase|Methanococcus maripaludis (strain C7 /

Query: 1 NTDCVQGLTH 10
N DCV + H
Sbjct: 78 NKDCVNAIVH 87


>sp|MDH_HALSA|MALATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NTDCVQG 7
NTD VQG
Sbjct: 58 NTDVVQG 64


>sp|MDH_HALS3|MALATE dehydrogenase|Halobacterium salinarum (strain ATCC 29341

Query: 1 NTDCVQG 7
NTD VQG
Sbjct: 58 NTDVVQG 64


>sp|TRM56_THEVO|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma volcanium

Query: 5 VQGLTH 10
VQG+TH
Sbjct: 227 VQGITH 232


>sp|Y094_METJA|UNCHARACTERIZED protein MJ0094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DCVQGLTH 10
DC++ TH
Sbjct: 146 DCIKNKTH 153




11|Sequence|51|60|QGLTHSKAQE

>sp|MPGP_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 3 LTHSKAQ 9
LTH KAQ
Sbjct: 224 LTHEKAQ 230




12|Sequence|56|65|SKAQEILARD

>sp|GLMM_THEKO|PROBABLE phosphoglucosamine mutase|Thermococcus kodakarensis (strain ATCC

Query: 1 SKAQEILARD 10
+KA EI+AR+
Sbjct: 374 AKAMEIIARE 383


>sp|PRPB_AERPE|2-METHYLISOCITRATE lyase|Aeropyrum pernix (strain ATCC 700893

Query: 2 KAQEILAR 9
KA+E+LAR
Sbjct: 294 KAEELLAR 301




13|Sequence|61|70|ILARDGPNAL

>sp|ASSY_METBA|ARGININOSUCCINATE synthase|Methanosarcina barkeri

Query: 1 ILARDGPNAL 10
ILAR PNAL
Sbjct: 348 ILARSSPNAL 357


>sp|ASSY_METAC|ARGININOSUCCINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ILARDGPNAL 10
ILAR PNAL
Sbjct: 347 ILARSSPNAL 356


>sp|ASSY_METMA|ARGININOSUCCINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ILARDGPNAL 10
ILAR PNAL
Sbjct: 347 ILARSSPNAL 356


>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ILARDGPNAL 10
I RDGP++L
Sbjct: 356 IFTRDGPDSL 365


>sp|YNH2_METBA|UNCHARACTERIZED protein in nifH2 5'region|Methanosarcina barkeri

Query: 1 ILARDGPNAL 10
I+ DGPN+L
Sbjct: 154 IIGADGPNSL 163


>sp|HUTG_HALSA|FORMIMIDOYLGLUTAMASE salinarum (strain ATCC 700922

Query: 3 ARDGPNAL 10
ARDGP+A+
Sbjct: 55 ARDGPSAI 62


>sp|HUTG_HALS3|FORMIMIDOYLGLUTAMASE salinarum (strain ATCC 29341

Query: 3 ARDGPNAL 10
ARDGP+A+
Sbjct: 55 ARDGPSAI 62


>sp|ILVH_METTH|PROBABLE acetolactate synthase small subunit|Methanothermobacter

Query: 2 LARDGPNAL 10
LAR GP A+
Sbjct: 153 LARTGPTAM 161


>sp|DTDA_NATPD|D-AMINOACYL-TRNA deacylase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LARDGPNAL 10
LAR PNAL
Sbjct: 108 LARAAPNAL 116


>sp|GGGPS_PYRAR|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LARDGPNAL 10
+AR+GPN +
Sbjct: 208 IAREGPNVI 216


>sp|SFSA_PYRFU|SUGAR fermentation stimulation protein homolog|Pyrococcus furiosus

Query: 2 LARDGPNAL 10
LARDG A+
Sbjct: 162 LARDGKRAM 170


>sp|RISC_AERPE|RIBOFLAVIN synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LARDGPNAL 10
L R+GP AL
Sbjct: 128 LIREGPEAL 136




14|Sequence|66|75|GPNALTPPPT

>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GPNALTPPPT 10
GP+ LTPP T
Sbjct: 23 GPSVLTPPTT 32


>sp|ALF_HALVD|FRUCTOSE-BISPHOSPHATE aldolase class 2|Haloferax volcanii (strain ATCC 29605

Query: 2 PNALTPP 8
PNA+ PP
Sbjct: 268 PNAIVPP 274


>sp|RSMA_METBU|PROBABLE ribosomal RNA small subunit|Methanococcoides burtonii (strain DSM

Query: 2 PNALTPPP 9
P+A +PPP
Sbjct: 170 PSAFSPPP 177


>sp|TDXH1_PICTO|PEROXIREDOXIN 1|Picrophilus torridus (strain ATCC 700027

Query: 1 GPNALTPPP 9
G N L PPP
Sbjct: 180 GDNVLNPPP 188


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 NALTPPPT 10
+ L PPPT
Sbjct: 110 SGLVPPPT 117


>sp|HEM1_HALMA|GLUTAMYL-TRNA reductase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GPNALTPP 8
GP+ TPP
Sbjct: 411 GPDQATPP 418


>sp|LYSZ_PYRAE|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum aerophilum

Query: 3 NALTPPP 9
+ LTPPP
Sbjct: 139 DKLTPPP 145


>sp|SEPS_METLZ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GPNALTPPPT 10
GP+ +TPP +
Sbjct: 23 GPSVITPPES 32


>sp|MTD_METB6|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoregula

Query: 2 PNALTPPPT 10
PN + P PT
Sbjct: 68 PNGVLPGPT 76


>sp|MTD_METMA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 2 PNALTPPPT 10
PNA P PT
Sbjct: 69 PNAAAPGPT 77


>sp|RNH2_SULTO|RIBONUCLEASE HII|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 LTPPP 9
LTPPP
Sbjct: 183 LTPPP 187


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 1 GPNALTPP 8
GP+ +TPP
Sbjct: 23 GPSVITPP 30


>sp|RSMA_METHJ|PROBABLE ribosomal RNA small subunit|Methanospirillum hungatei JF-1 (strain

Query: 2 PNALTPPP 9
P A +PPP
Sbjct: 161 PGAFSPPP 168


>sp|MTD_METAC|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 2 PNALTPPPT 10
PNA P PT
Sbjct: 69 PNAAAPGPT 77


>sp|FAEHP_METPE|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 PNALTPPPT 10
PN LT P T
Sbjct: 53 PNLLTKPAT 61


>sp|FAEHP_METB6|BIFUNCTIONAL enzyme Fae/Hps|Methanoregula boonei (strain DSM 21154

Query: 2 PNALTPPPT 10
PN LT P T
Sbjct: 53 PNLLTKPAT 61


>sp|MTD_METMJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoculleus

Query: 2 PNALTPPPT 10
PN + P PT
Sbjct: 68 PNGVLPGPT 76


>sp|MTD_METKA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanopyrus

Query: 1 GPNALTPPPT 10
GPN P P+
Sbjct: 72 GPNPAAPGPS 81


>sp|FAEHP_METHJ|BIFUNCTIONAL enzyme Fae/Hps|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PNALTPPPT 10
PN LT P T
Sbjct: 53 PNLLTKPAT 61


>sp|Y1037_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 GPNALTPPPT 10
GP L PPT
Sbjct: 102 GPENLCLPPT 111


>sp|FAEHP_ARCFU|BIFUNCTIONAL enzyme Fae/Hps|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PNALTPPP 9
PN +T PP
Sbjct: 54 PNLITKPP 61




15|Sequence|71|80|TPPPTTPEWV

>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 3 PPTTPEW 9
PPT P W
Sbjct: 569 PPTIPSW 575


>sp|SYTE_SACS2|THREONINE--TRNA ligase editing subunit|Saccharolobus solfataricus (strain ATCC

Query: 3 PPTTPEWV 10
PPT P+W+
Sbjct: 266 PPTLPDWL 273


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 TPPPTTPEWV 10
TP P PEWV
Sbjct: 516 TPLPWDPEWV 525


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TPPPTTPEWV 10
TP P PEWV
Sbjct: 516 TPLPWDPEWV 525


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 TPPPTTPEWV 10
TP P PEWV
Sbjct: 516 TPLPWDPEWV 525


>sp|RL24_PICTO|LARGE ribosomal subunit protein uL24|Picrophilus torridus (strain ATCC

Query: 2 PPPTTPE 8
PPP PE
Sbjct: 105 PPPEVPE 111


>sp|TFRA_METTM|FUMARATE reductase (CoM/CoB) subunit A|Methanothermobacter marburgensis

Query: 3 PPTTPEW 9
P T PEW
Sbjct: 524 PETRPEW 530


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PPPTTP 7
PPPT P
Sbjct: 114 PPPTNP 119


>sp|RL15_PYRAE|LARGE ribosomal subunit protein uL15|Pyrobaculum aerophilum (strain

Query: 2 PPPTTPEW 9
PPP + EW
Sbjct: 69 PPPISIEW 76


>sp|TRUB_PYRAR|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum arsenaticum (strain DSM

Query: 4 PTTPEW 9
PT PEW
Sbjct: 15 PTNPEW 20


>sp|METXA_HALSA|HOMOSERINE O-acetyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PPPTTPEW 9
PP T P+W
Sbjct: 107 PPVTVPDW 114


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TPPPTTPEWV 10
TP P P+WV
Sbjct: 516 TPLPWDPDWV 525


>sp|RNFD_METAC|ION-TRANSLOCATING oxidoreductase complex subunit D|Methanosarcina acetivorans

Query: 3 PPTTPEWV 10
PPT P W+
Sbjct: 89 PPTLPAWM 96


>sp|Y078_THEAC|UPF0284 protein Ta0078|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PPTTPEWV 10
PP TPE +
Sbjct: 71 PPMTPEGI 78


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TPPPTTPEWV 10
TP P P+WV
Sbjct: 516 TPLPWDPDWV 525


>sp|SUCC_PYRAR|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum arsenaticum (strain

Query: 4 PTTPEW 9
P TP+W
Sbjct: 163 PETPQW 168


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 4 PTTPEWV 10
P TPE+V
Sbjct: 604 PVTPEYV 610


>sp|Y2001_METTM|UNCHARACTERIZED protein MTBMA_p00010|Methanothermobacter marburgensis (strain ATCC

Query: 3 PPTTPE 8
PP TPE
Sbjct: 732 PPDTPE 737


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 5 TTPEWV 10
T PEW+
Sbjct: 1030 TVPEWI 1035


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PTTPEW 9
PT P W
Sbjct: 565 PTVPSW 570


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PTTPEW 9
PT P W
Sbjct: 565 PTVPSW 570


>sp|THYX_HALMA|FLAVIN-DEPENDENT thymidylate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TPPPTT-PEWV 10
TPP T P+W+
Sbjct: 120 TPPSATDPDWI 130


>sp|FAU1_PYRAE|PROBABLE ribonuclease FAU-1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 TTPEW 9
TTPEW
Sbjct: 378 TTPEW 382


>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TPPPTTP 7
TP P TP
Sbjct: 517 TPAPATP 523


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 2 PPPTTPEWV 10
PP T PE +
Sbjct: 781 PPQTIPEHI 789


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 TPPPT 5
TPPPT
Sbjct: 34 TPPPT 38


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 PPTTPEWV 10
PP P W+
Sbjct: 494 PPALPTWL 501


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 PPPTTPEW 9
PP PEW
Sbjct: 462 PPAYCPEW 469


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 PPTTPEWV 10
PP P W+
Sbjct: 494 PPALPTWL 501


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 PPTTPEWV 10
PP P W+
Sbjct: 494 PPALPTWL 501


>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 PPTTPEWV 10
PP P W+
Sbjct: 494 PPALPTWL 501


>sp|GUAAB_THEAC|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma acidophilum

Query: 3 PPTTPEW 9
PP T EW
Sbjct: 303 PPATIEW 309


>sp|RS3_PYRCJ|SMALL ribosomal subunit protein uS3|Pyrobaculum calidifontis (strain DSM

Query: 3 PPTTPE 8
PPT PE
Sbjct: 207 PPTRPE 212


>sp|SYT_METMP|THREONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PPTTPEWV 10
PP P W+
Sbjct: 494 PPALPTWL 501


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TPPPT 5
TPPPT
Sbjct: 37 TPPPT 41


>sp|Y153_THEVO|UPF0284 protein TV0153|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PPTTPEWV 10
PP TPE +
Sbjct: 69 PPMTPEGI 76


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TPPPT 5
TPPPT
Sbjct: 37 TPPPT 41


>sp|RL15_PYRAR|LARGE ribosomal subunit protein uL15|Pyrobaculum arsenaticum (strain

Query: 2 PPPTTPEW 9
PP T EW
Sbjct: 69 PPTITVEW 76


>sp|TRMY_HALMA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Haloarcula marismortui

Query: 4 PTTPEW 9
PTTPE+
Sbjct: 12 PTTPEF 17


>sp|GUAAB_THEVO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma volcanium

Query: 3 PPTTPEW 9
PP T EW
Sbjct: 303 PPATIEW 309


>sp|GUAAB_PICTO|GMP synthase [glutamine-hydrolyzing] subunit B|Picrophilus torridus

Query: 1 TPPPTTPEW 9
+ PP T EW
Sbjct: 296 SKPPATIEW 304


>sp|DNAG_SULTO|DNA primase DnaG|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PTTPEWV 10
PTTPE +
Sbjct: 296 PTTPEQI 302


>sp|CAS5C_SACS2|CRISPR-ASSOCIATED protein Cas5 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PPPTT 6
PPPTT
Sbjct: 31 PPPTT 35


>sp|GUAA_AERPE|GMP synthase [glutamine-hydrolyzing]|Aeropyrum pernix (strain ATCC

Query: 1 TPPPTTPEW 9
+ PP+T EW
Sbjct: 503 SKPPSTIEW 511


>sp|COFG_ARCFU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TPPPTTPE 8
TPPPT E
Sbjct: 209 TPPPTLEE 216


>sp|SOXE_SULAC|SULFOCYANIN acidocaldarius (strain ATCC 33909

Query: 1 TPPPTTPE 8
TP P +PE
Sbjct: 119 TPTPQSPE 126


>sp|PURA_NATPD|ADENYLOSUCCINATE synthetase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 TPPPTTPEW 9
T P TT +W
Sbjct: 381 TMPATTEQW 389


>sp|METXA_NATPD|HOMOSERINE O-acetyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PPPTTPE 8
PP T PE
Sbjct: 100 PPSTNPE 106


>sp|THYX_HALSA|FLAVIN-DEPENDENT thymidylate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PPPTTPEWV 10
P T P+WV
Sbjct: 122 PSATDPDWV 130


>sp|RS15_PYRCJ|SMALL ribosomal subunit protein uS15|Pyrobaculum calidifontis (strain

Query: 2 PPPTTPEWV 10
P PT P W+
Sbjct: 18 PHPTVPTWI 26


>sp|RS15_HYPBU|SMALL ribosomal subunit protein uS15|Hyperthermus butylicus (strain DSM

Query: 4 PTTPEWV 10
PT P+W+
Sbjct: 19 PTVPKWI 25


>sp|HIS7_PYRCJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PPPTTPEWV 10
P P P WV
Sbjct: 126 PLPMFPHWV 134




16|Sequence|76|85|TPEWVKFCRQ

>sp|RS15_METS5|SMALL ribosomal subunit protein uS15|Metallosphaera sedula (strain ATCC

Query: 1 TPEWVKFCRQ 10
+P+WV+F R+
Sbjct: 20 SPKWVRFSRE 29


>sp|RS19E_THEVO|SMALL ribosomal subunit protein eS19|Thermoplasma volcanium (strain

Query: 2 PEWVKFCR 9
P WVKF +
Sbjct: 29 PNWVKFVK 36


>sp|Y068_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 2 PEWVKFCR 9
PE VK CR
Sbjct: 234 PELVKICR 241


>sp|NOB1_ARCFU|ENDORIBONUCLEASE Nob1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EWVKFCR 9
+WVK CR
Sbjct: 128 KWVKVCR 134


>sp|RS19E_METTH|SMALL ribosomal subunit protein eS19|Methanothermobacter

Query: 1 TPEWVKFCR 9
+PEWV F +
Sbjct: 28 SPEWVNFVK 36


>sp|RS15_SULTO|SMALL ribosomal subunit protein uS15|Sulfurisphaera tokodaii (strain

Query: 2 PEWVKFCR 9
P+WV+F R
Sbjct: 21 PKWVRFTR 28


>sp|Y300_HALMA|UPF0173 metal-dependent hydrolase rrnAC0300|Haloarcula marismortui

Query: 1 TPEWVKFCR 9
TPE V++C+
Sbjct: 67 TPEVVEYCK 75


>sp|RS15_SULAC|SMALL ribosomal subunit protein uS15|Sulfolobus acidocaldarius (strain

Query: 2 PEWVKFCR 9
P+WV+F R
Sbjct: 21 PKWVRFTR 28


>sp|GUAAB_HALSA|GMP synthase [glutamine-hydrolyzing] subunit B|Halobacterium salinarum

Query: 1 TPEWVKFCRQ 10
TPE V CR+
Sbjct: 202 TPEKVAVCRE 211


>sp|GUAAB_HALS3|GMP synthase [glutamine-hydrolyzing] subunit B|Halobacterium salinarum

Query: 1 TPEWVKFCRQ 10
TPE V CR+
Sbjct: 202 TPEKVAVCRE 211


>sp|RS19E_METJA|SMALL ribosomal subunit protein eS19|Methanocaldococcus jannaschii

Query: 2 PEWVKFCR 9
PEWV F +
Sbjct: 28 PEWVDFVK 35


>sp|RS19_STAMF|SMALL ribosomal subunit protein uS19|Staphylothermus marinus (strain

Query: 2 PEWVKF 7
PEW KF
Sbjct: 9 PEWKKF 14


>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PEWVKF 7
PEW KF
Sbjct: 192 PEWDKF 197


>sp|RS19_SULTO|SMALL ribosomal subunit protein uS19|Sulfurisphaera tokodaii (strain

Query: 2 PEWVKF 7
PEW KF
Sbjct: 7 PEWKKF 12


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 PEWVKF 7
PEW KF
Sbjct: 191 PEWDKF 196


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 PEWVKF 7
PEW KF
Sbjct: 191 PEWDKF 196


>sp|SYP_METVS|PROLINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PEWVKF 7
PEW KF
Sbjct: 191 PEWDKF 196


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 PEWVKF 7
PEW KF
Sbjct: 191 PEWDKF 196


>sp|SYP_METM6|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 PEWVKF 7
PEW KF
Sbjct: 191 PEWDKF 196


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PEWVK 6
PEW+K
Sbjct: 348 PEWIK 352


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 PEWVK 6
PEW+K
Sbjct: 1032 PEWIK 1036


>sp|ENDA_THEON|TRNA-SPLICING endonuclease|Thermococcus onnurineus (strain NA1)

Query: 3 EWVKF 7
EWVKF
Sbjct: 167 EWVKF 171


>sp|ENDA_THEKO|TRNA-SPLICING endonuclease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 EWVKF 7
EWVKF
Sbjct: 164 EWVKF 168


>sp|MOAC_METMA|PROBABLE cyclic pyranopterin monophosphate synthase|Methanosarcina mazei

Query: 1 TPEWVKFCRQ 10
TPE + C Q
Sbjct: 69 TPETIPMCHQ 78


>sp|MOAC_METAC|PROBABLE cyclic pyranopterin monophosphate synthase|Methanosarcina

Query: 1 TPEWVKFCRQ 10
TPE + C Q
Sbjct: 72 TPETIPMCHQ 81


>sp|RS19_SULAC|SMALL ribosomal subunit protein uS19|Sulfolobus acidocaldarius (strain

Query: 2 PEWVKF 7
PEW KF
Sbjct: 7 PEWKKF 12


>sp|SYP_METS3|PROLINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 PEWVKF 7
PEW KF
Sbjct: 192 PEWDKF 197


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 2 PEWVKF 7
PEW KF
Sbjct: 452 PEWRKF 457


>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 1 TPEWVKFCRQ 10
TP +K CR+
Sbjct: 89 TPTQIKRCRE 98


>sp|RS19_AERPE|SMALL ribosomal subunit protein uS19|Aeropyrum pernix (strain ATCC

Query: 2 PEWVKF 7
PEW KF
Sbjct: 7 PEWKKF 12


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TPEWVKFCRQ 10
TP +K CR+
Sbjct: 89 TPTQIKKCRE 98


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 1 TPEWVK 6
TPEW++
Sbjct: 319 TPEWIE 324


>sp|SYP_METJA|PROLINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PEWVKF 7
PEW KF
Sbjct: 191 PEWDKF 196


>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PEWVKF 7
PEW KF
Sbjct: 191 PEWDKF 196


>sp|SYP_THEVO|PROLINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PEWVKF 7
PEW KF
Sbjct: 195 PEWDKF 200


>sp|RS15_METJA|SMALL ribosomal subunit protein uS15|Methanocaldococcus jannaschii

Query: 2 PEWVKF 7
PEWV++
Sbjct: 23 PEWVQY 28


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PEWVKF 7
P+W+K+
Sbjct: 1442 PKWIKY 1447


>sp|Y642_METJA|UNCHARACTERIZED protein MJ0642|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EWVKF 7
EW+KF
Sbjct: 154 EWIKF 158


>sp|ENDA_PYRHO|TRNA-SPLICING endonuclease|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EWVKF 7
EW+KF
Sbjct: 166 EWIKF 170


>sp|SYP_SULTO|PROLINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PEWVKF 7
PEW KF
Sbjct: 201 PEWDKF 206


>sp|RS19E_ARCFU|SMALL ribosomal subunit protein eS19|Archaeoglobus fulgidus (strain

Query: 2 PEWVKFCR 9
PEW K+ +
Sbjct: 27 PEWAKYVK 34


>sp|ENDA_PYRAB|TRNA-SPLICING endonuclease|Pyrococcus abyssi (strain GE5 /

Query: 3 EWVKF 7
EW+KF
Sbjct: 166 EWIKF 170


>sp|SYP_PYRAE|PROLINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PEWVKF 7
PEW KF
Sbjct: 205 PEWDKF 210


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 PEWVKF 7
PEW KF
Sbjct: 201 PEWDKF 206


>sp|RS15_THEPD|SMALL ribosomal subunit protein uS15|Thermofilum pendens (strain DSM

Query: 2 PEWVK 6
PEWVK
Sbjct: 21 PEWVK 25


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PEWVKF 7
PEW KF
Sbjct: 200 PEWDKF 205


>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 PEWVKF 7
PEW KF
Sbjct: 196 PEWDKF 201


>sp|SYP_SULAC|PROLINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PEWVKF 7
PEW KF
Sbjct: 201 PEWDKF 206


>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 PEWVKFC 8
PEW KF
Sbjct: 201 PEWDKFA 207


>sp|Y872_METJA|UNCHARACTERIZED lipoprotein MJ0872|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EWVKF 7
EW+KF
Sbjct: 211 EWIKF 215


>sp|SYP_ARCFU|PROLINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PEWVKF 7
PEW KF
Sbjct: 196 PEWDKF 201


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PEWVKF 7
PEW KF
Sbjct: 199 PEWDKF 204


>sp|SYP_PYRFU|PROLINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PEWVKF 7
PEW KF
Sbjct: 199 PEWDKF 204


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 PEWVKF 7
PEW KF
Sbjct: 199 PEWDKF 204


>sp|SYP_AERPE|PROLINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PEWVKFC 8
PEW KF
Sbjct: 203 PEWDKFA 209


>sp|Y556_ARCFU|PUTATIVE sulfur carrier protein AF_0556|Archaeoglobus fulgidus (strain

Query: 2 PEWVK 6
PEWVK
Sbjct: 45 PEWVK 49


>sp|RS19_HYPBU|SMALL ribosomal subunit protein uS19|Hyperthermus butylicus (strain DSM

Query: 2 PEWVKF 7
PEW KF
Sbjct: 10 PEWKKF 15




17|Sequence|81|90|KFCRQLFGGF

>sp|DMD_SACS2|DIPHOSPHOMEVALONATE decarboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 CRQLFGGF 10
CR +FGGF
Sbjct: 143 CRSMFGGF 150


>sp|PANE_ARCFU|2-DEHYDROPANTOATE 2-reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KFCRQLFGG 9
K+CR++ GG
Sbjct: 108 KYCRKVLGG 116


>sp|GGGPS_NITMS|GERANYLGERANYLGLYCERYL phosphate synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 KFCRQLFGGF 10
K RQLF GF
Sbjct: 191 KTVRQLFNGF 200


>sp|Y978_META3|UPF0285 protein Maeo_0978|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 RQLFGGF 10
++LFGGF
Sbjct: 169 KKLFGGF 175


>sp|Y631_ARCFU|UNCHARACTERIZED protein AF_0631|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 QLFGGF 10
QLFGGF
Sbjct: 26 QLFGGF 31


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 FCRQLFGGF 10
F R FGG+
Sbjct: 425 FARSSFGGY 433


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 KFCRQLFGGF 10
K CR GGF
Sbjct: 43 KICRIANGGF 52




18|Sequence|86|95|LFGGFSILLW

>sp|PURP_IGNH4|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LFGGFSILLW 10
+FG ILLW
Sbjct: 108 IFGSRKILLW 117


>sp|MFNA_METS3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanobrevibacter smithii

Query: 2 FGGFSI 7
FGGFSI
Sbjct: 200 FGGFSI 205


>sp|HDRB1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B1|Methanococcus

Query: 1 LFGGFSILLW 10
+FG F ++ W
Sbjct: 52 VFGSFDLMTW 61


>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 LFGGFSILL 9
+G FSILL
Sbjct: 322 FYGSFSILL 330


>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 LFGGFSILL 9
+G FSILL
Sbjct: 322 FYGSFSILL 330


>sp|Y2122_ARCFU|UNCHARACTERIZED protein AF_2122|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LFGGFSILLW 10
++G S+LLW
Sbjct: 44 IYGQLSLLLW 53


>sp|Y905_PICTO|UPF0215 protein PTO0905|Picrophilus torridus (strain ATCC 700027

Query: 2 FGGFSIL 8
FGGF+I+
Sbjct: 77 FGGFNIV 83


>sp|KHSE_PYRAB|HOMOSERINE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 FGGFSIL 8
+GGF+IL
Sbjct: 139 YGGFNIL 145


>sp|CBID_THEVO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LFGGFSIL 8
+FGG S+L
Sbjct: 174 VFGGISVL 181


>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 GGFSILLW 10
GGF L W
Sbjct: 136 GGFQALQW 143




19|Sequence|91|100|SILLWIGAIL

>sp|PDXS_SACS2|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus solfataricus

Query: 1 SILLWIGA 8
++++W+GA
Sbjct: 264 ALMMWLGA 271


>sp|PDXS_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 1 SILLWIGA 8
++++W+GA
Sbjct: 264 ALMMWLGA 271


>sp|PDXS_SACI6|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 1 SILLWIGA 8
++++W+GA
Sbjct: 264 ALMMWLGA 271


>sp|PDXS_SACI4|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 1 SILLWIGA 8
++++W+GA
Sbjct: 264 ALMMWLGA 271


>sp|PDXS_SACI3|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 1 SILLWIGA 8
++++W+GA
Sbjct: 264 ALMMWLGA 271


>sp|PDXS_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 1 SILLWIGA 8
++++W+GA
Sbjct: 264 ALMMWLGA 271


>sp|PDXS_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 1 SILLWIGA 8
++++W+GA
Sbjct: 264 ALMMWLGA 271


>sp|PDXS_PYRAR|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum arsenaticum (strain

Query: 1 SILLWIGA 8
++++W+GA
Sbjct: 263 ALMMWLGA 270


>sp|PDXS_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum aerophilum (strain

Query: 1 SILLWIGA 8
++++W+GA
Sbjct: 262 ALMMWLGA 269


>sp|PDXS_SULTO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Sulfurisphaera tokodaii (strain

Query: 1 SILLWIGA 8
++++W+GA
Sbjct: 242 ALMMWLGA 249


>sp|PDXS_DESA1|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Desulfurococcus amylolyticus

Query: 1 SILLWIGA 8
++++W+GA
Sbjct: 261 ALMMWLGA 268




20|Sequence|96|105|IGAILCFLAY

>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 1 IGAILCFLAY 10
+GAI+C + Y
Sbjct: 323 VGAIICAIGY 332


>sp|COBS_METBF|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GAILCFLAY 10
GAI+CFL +
Sbjct: 203 GAIVCFLPF 211


>sp|MPTE_METJA|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 CFLAY 10
CFLAY
Sbjct: 176 CFLAY 180


>sp|COBS_METBU|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IGAILCFLAY 10
+GA++C LA+
Sbjct: 194 LGALVCVLAF 203




21|Sequence|101|110|CFLAYGIQAG

>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 1 CFLAYG 6
CF+AYG
Sbjct: 310 CFVAYG 315


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 1 CFLAYG 6
CF+AYG
Sbjct: 310 CFVAYG 315


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 3 LAYGIQAG 10
L YG+Q+G
Sbjct: 341 LCYGLQSG 348


>sp|LADH_METVS|LACTALDEHYDE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 5 YGIQAG 10
YG+QAG
Sbjct: 393 YGLQAG 398


>sp|LADH_METMP|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 5 YGIQAG 10
YG+QAG
Sbjct: 393 YGLQAG 398


>sp|LADH_METM7|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 5 YGIQAG 10
YG+QAG
Sbjct: 393 YGLQAG 398


>sp|LADH_METM5|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 5 YGIQAG 10
YG+QAG
Sbjct: 393 YGLQAG 398


>sp|ACDD_METTH|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanothermobacter

Query: 1 CFLAYGIQ 8
C L YGI+
Sbjct: 270 CALGYGIE 277


>sp|ACDD_METKA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanopyrus kandleri

Query: 1 CFLAYGIQ 8
C L YGI+
Sbjct: 289 CALGYGIE 296


>sp|ACDD_METJA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanocaldococcus

Query: 1 CFLAYGIQ 8
C L YGI+
Sbjct: 290 CALGYGIE 297


>sp|Y712_ARCFU|UNCHARACTERIZED protein AF_0712|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CFLAYGI 7
CF AYGI
Sbjct: 97 CFTAYGI 103


>sp|Y543_METHJ|UPF0316 protein Mhun_0543|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 CFLAYG 6
C++AYG
Sbjct: 73 CYIAYG 78




22|Sequence|106|115|GIQAGTEDDP

>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GIQAGTEDDP 10
GI+A ED+P
Sbjct: 133 GIKAKHEDEP 142


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GIQAGTEDDP 10
GI+A ED+P
Sbjct: 133 GIKAKHEDEP 142


>sp|GPMI_HALMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Haloarcula marismortui (strain ATCC 43049

Query: 5 GTEDDP 10
GTEDDP
Sbjct: 457 GTEDDP 462


>sp|KAE1B_HALMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 AGTEDDP 10
AGT DDP
Sbjct: 507 AGTADDP 513


>sp|IF2P_METMJ|PROBABLE translation initiation factor IF-2|Methanoculleus marisnigri

Query: 2 IQAGTEDDP 10
I+AGT DP
Sbjct: 393 IEAGTIKDP 401




23|Sequence|111|120|TEDDPSGDNL

>sp|RL1_METS5|LARGE ribosomal subunit protein uL1|Metallosphaera sedula (strain ATCC

Query: 1 TEDDPSGD 8
TED PSGD
Sbjct: 171 TEDQPSGD 178


>sp|ARLMC_PYRFU|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus furiosus

Query: 3 DDPSGD 8
DDPSG+
Sbjct: 218 DDPSGE 223


>sp|KHSE_PYRNV|HOMOSERINE kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 DPSGDN 9
DP GDN
Sbjct: 46 DPGGDN 51


>sp|PSA_PYRFU|PROTEASOME subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TEDDPSGDNL 10
T ++PS DN+
Sbjct: 201 TMENPSADNI 210


>sp|PYRB_METHJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanospirillum hungatei

Query: 2 EDDPSGDNL 10
E DPS DNL
Sbjct: 265 EIDPSVDNL 273


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 4 DPSGDNL 10
DP GDN+
Sbjct: 458 DPLGDNI 464




24|Sequence|116|125|SGDNLYLGIV

>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DNLYLGIV 10
D+LYLGI+
Sbjct: 398 DDLYLGIL 405


>sp|OTC_STAMF|ORNITHINE carbamoyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 2 GDNLYLG 8
GD LYLG
Sbjct: 74 GDALYLG 80


>sp|PURP_PYRCJ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum calidifontis (strain DSM

Query: 1 SGDNLYLGI 9
+G N+Y+G+
Sbjct: 288 AGTNVYMGV 296


>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain Fusaro

Query: 2 GDNLYL 7
GDN+YL
Sbjct: 386 GDNIYL 391


>sp|PURP_ARCFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Archaeoglobus fulgidus (strain ATCC

Query: 2 GDNLYLG 8
G+N+Y+G
Sbjct: 332 GENMYMG 338


>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 GDNLYLGIV 10
GDNL +G++
Sbjct: 289 GDNLNIGVM 297


>sp|Y1138_METJA|UNCHARACTERIZED protein MJ1138|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GDNLYLG 8
GD +YLG
Sbjct: 75 GDKIYLG 81


>sp|AGLS_HALVD|DOLICHOL phosphate-mannose mannosyltransferase|Haloferax volcanii (strain

Query: 2 GDNLYLGIV 10
D+L+LGI+
Sbjct: 305 ADDLFLGII 313


>sp|Y886_METTH|UNCHARACTERIZED protein MTH_886|Methanothermobacter thermautotrophicus (strain

Query: 2 GDNLYLGI 9
G+ LY+GI
Sbjct: 71 GETLYVGI 78


>sp|Y1554_METJA|UNCHARACTERIZED protein MJ1554|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GDNLYLGI 9
G+NL++GI
Sbjct: 488 GNNLFIGI 495


>sp|FEOB_METJA|FE(2+) transporter FeoB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SGDNLYLG 8
+G+N+Y+G
Sbjct: 24 TGENVYIG 31




25|Sequence|121|130|YLGIVLAAVV

>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 1 YLGIVLA 7
YLG+VLA
Sbjct: 415 YLGVVLA 421


>sp|Y1569_METJA|PUTATIVE metal transport protein MJ1569|Methanocaldococcus jannaschii

Query: 1 YLGIVLAAVV 10
Y+GIV AA+V
Sbjct: 143 YVGIVAAAIV 152




26|Sequence|126|135|LAAVVIITGC

>sp|Y1845_ARCFU|UNCHARACTERIZED protein AF_1845|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LAAVVIITGC 10
LA VV+++GC
Sbjct: 13 LAVVVVLSGC 22


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LAAVVIITGC 10
L AVV++T C
Sbjct: 110 LDAVVMVTNC 119


>sp|AMTAB_PYRHO|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 5 VIITGC 10
VI+TGC
Sbjct: 71 VIVTGC 76


>sp|AMTAB_PYRAB|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 5 VIITGC 10
VI+TGC
Sbjct: 71 VIVTGC 76


>sp|CPGS_METFV|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermus fervidus (strain

Query: 1 LAAVVIITGC 10
LA +VIIT C
Sbjct: 295 LADLVIITMC 304




27|Sequence|131|140|IITGCFSYYQ

>sp|PUS10_PICTO|TRNA pseudouridine synthase Pus10|Picrophilus torridus (strain ATCC

Query: 2 ITGCFSYY 9
+TGC +YY
Sbjct: 191 MTGCENYY 198


>sp|TBPC_HALSA|TATA-BOX-BINDING protein C|Halobacterium salinarum (strain ATCC 700922

Query: 1 IITGCFS 7
IITGC S
Sbjct: 62 IITGCAS 68


>sp|COFD_METVS|2-PHOSPHO-L-LACTATE transferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 ITGCFSYYQ 10
+TG + YY+
Sbjct: 251 VTGIYGYYK 259




28|Sequence|136|145|FSYYQEAKSS

>sp|PSLS_METTH|PHOSPHOSULFOLACTATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 YYQEAKS 9
Y+QEA+S
Sbjct: 95 YFQEARS 101


>sp|MFNA_METAC|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina acetivorans

Query: 1 FSYYQEAKS 9
FSY + AKS
Sbjct: 12 FSYLENAKS 20


>sp|MFNA_METMA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina mazei (strain

Query: 1 FSYYQEAKS 9
FSY + AKS
Sbjct: 12 FSYLENAKS 20


>sp|HEXPP_SACS2|HEXAPRENYL pyrophosphate synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 FSYYQEAK 8
F YY+E K
Sbjct: 221 FKYYREGK 228




29|Sequence|141|150|EAKSSKIMES

>sp|DGGGP_METHJ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EAKSSKIMES 10
+AKSSKI+++
Sbjct: 255 KAKSSKILKA 264




30|Sequence|146|155|KIMESFKNMV

>sp|DEOC_AERPE|DEOXYRIBOSE-PHOSPHATE aldolase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KIMESFKNMV 10
K++ESFK++V
Sbjct: 226 KVLESFKSLV 235


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KIMESFKNMV 10
+I++SFKN++
Sbjct: 144 EILDSFKNLI 153


>sp|DHOM_METJA|HOMOSERINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IMESFKN 8
I+ESFKN
Sbjct: 108 ILESFKN 114


>sp|PYLS_METTE|PYRROLYSINE--TRNA ligase|Methanosarcina thermophila

Query: 1 KIMESFKNM 9
K+M +FKN+
Sbjct: 453 KVMHNFKNI 461


>sp|HUTI_THEVO|IMIDAZOLONEPROPIONASE volcanium (strain ATCC 51530

Query: 1 KIMESFKNMV 10
KI+ SF+N +
Sbjct: 191 KILSSFRNYI 200


>sp|RL4_META3|LARGE ribosomal subunit protein uL4|Methanococcus aeolicus (strain ATCC

Query: 1 KIMESFKNM 9
+++E+FKN+
Sbjct: 154 EVLETFKNL 162


>sp|PYLS_METBF|PYRROLYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KIMESFKNM 9
K+M FKN+
Sbjct: 394 KVMHGFKNI 402


>sp|PYLS_METAC|PYRROLYSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KIMESFKNM 9
K+M FKN+
Sbjct: 418 KVMHGFKNI 426


>sp|RL30_PICTO|LARGE ribosomal subunit protein uL30|Picrophilus torridus (strain ATCC

Query: 1 KIMESFKNMV 10
K+++ FKN+V
Sbjct: 102 KMLKDFKNLV 111


>sp|PYLS_METBA|PYRROLYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 KIMESFKNM 9
K+M FKN+
Sbjct: 394 KVMHGFKNI 402


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MESFKNMV 10
+++FKNMV
Sbjct: 103 LDNFKNMV 110




31|Sequence|151|160|FKNMVPQQAL

>sp|EF2_METST|ELONGATION factor 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 KNMVPQQ 8
KNM P+Q
Sbjct: 180 KNMAPEQ 186


>sp|T2MT_METTF|TYPE II restriction enzyme MthTI|Methanothermobacter thermautotrophicus

Query: 1 FKNMVPQQAL 10
FKN++P +++
Sbjct: 212 FKNIIPPESI 221


>sp|RL30_PICTO|LARGE ribosomal subunit protein uL30|Picrophilus torridus (strain ATCC

Query: 1 FKNMVP 6
FKN+VP
Sbjct: 107 FKNLVP 112




32|Sequence|156|165|PQQALVIREG

>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 1 PQQALVIREG 10
P++AL IR G
Sbjct: 423 PEEALEIRNG 432


>sp|SPEE_THEVO|POLYAMINE aminopropyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PQQALVI 7
PQ ALVI
Sbjct: 80 PQSALVI 86


>sp|PIMT_METAR|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 3 QALVIREG 10
QAL IREG
Sbjct: 43 QALDIREG 50




33|Sequence|161|170|VIREGEKMQV

>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VIREGEKMQ 9
V+REGEKM
Sbjct: 632 VLREGEKMS 640


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VIREGEKMQ 9
V+REGEKM
Sbjct: 632 VLREGEKMS 640


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VIREGEKMQ 9
V+REGEKM
Sbjct: 632 VLREGEKMS 640


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VIREGEKM 8
V+REGEKM
Sbjct: 632 VLREGEKM 639


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VIREGEKM 8
V+REGEKM
Sbjct: 632 VLREGEKM 639


>sp|RL24_METS3|LARGE ribosomal subunit protein uL24|Methanobrevibacter smithii (strain

Query: 2 IREGEKMQV 10
IR+G+K+QV
Sbjct: 43 IRKGDKVQV 51


>sp|RRP42_AERPE|EXOSOME complex component Rrp42|Aeropyrum pernix (strain ATCC 700893

Query: 1 VIREGEKMQV 10
VIR GEK+ V
Sbjct: 130 VIRPGEKVWV 139


>sp|PYRB_METTH|ASPARTATE carbamoyltransferase catalytic subunit|Methanothermobacter

Query: 1 VIREGEKMQ 9
++RE EKM+
Sbjct: 19 ILREAEKME 27


>sp|Y1090_ARCFU|PUTATIVE antitoxin AF_1090|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IREGEKMQV 10
+REGEK+++
Sbjct: 22 LREGEKVKI 30


>sp|HPRL1_HALTV|HGPRTASE-LIKE protein 1|Haloterrigena turkmenica (strain ATCC 51198

Query: 2 IREGEKMQV 10
+REGEK+ V
Sbjct: 111 VREGEKVLV 119


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 1 VIREGEKMQV 10
++R GEK+ V
Sbjct: 250 IVRPGEKIPV 259




34|Sequence|166|175|EKMQVNAEEV

>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EKMQVNAEEV 10
E+M+ NAE V
Sbjct: 874 ERMRFNAEPV 883




35|Sequence|171|180|NAEEVVVGDL

>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NAEEVVVGDL 10
NA+EVVVG++
Sbjct: 887 NAKEVVVGNV 896


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NAEEVVVGDL 10
NA+EVVVG +
Sbjct: 887 NAKEVVVGKV 896


>sp|DNLI2_METMA|DNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AEEVVVGDL 10
AE+V+ GDL
Sbjct: 385 AEQVITGDL 393


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 2 AEEVVVGDL 10
EEV VGDL
Sbjct: 965 GEEVKVGDL 973


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NAEEVVVGDL 10
NA+EVV+G +
Sbjct: 887 NAKEVVIGKV 896


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 3 EEVVVGDL 10
EEV +GDL
Sbjct: 112 EEVYIGDL 119


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 3 EEVVVGDL 10
EEV +GDL
Sbjct: 112 EEVYIGDL 119


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 3 EEVVVGDL 10
E+VVVGD+
Sbjct: 79 EKVVVGDV 86


>sp|GGGPS_HALMA|GERANYLGERANYLGLYCERYL phosphate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 NAEEVVVGDL 10
+A+ +VVGDL
Sbjct: 204 HADTIVVGDL 213


>sp|GGGPS_HALWD|GERANYLGERANYLGLYCERYL phosphate synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 NAEEVVVGDL 10
+A+ +VVGDL
Sbjct: 205 HADTIVVGDL 214


>sp|GGGPS_NATPD|GERANYLGERANYLGLYCERYL phosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 NAEEVVVGDL 10
+A+ V+VGDL
Sbjct: 205 HADTVIVGDL 214


>sp|GGGPS_HALSA|GERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NAEEVVVGDL 10
+A+ +VVGDL
Sbjct: 204 HADTIVVGDL 213


>sp|GGGPS_HALS3|GERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 NAEEVVVGDL 10
+A+ +VVGDL
Sbjct: 204 HADTIVVGDL 213


>sp|KPYK_AERPE|PYRUVATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 NAEEVVVGD 9
AE +VVGD
Sbjct: 403 GAEPIVVGD 411


>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NAEEVVVGD 9
NAE V VGD
Sbjct: 514 NAEMVKVGD 522


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 3 EEVVVGDL 10
EEV VGD+
Sbjct: 241 EEVAVGDI 248




36|Sequence|176|185|VVGDLVEIKG

>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 1 VVGDLVEIKG 10
V GDL EIKG
Sbjct: 226 VAGDLWEIKG 235


>sp|TRUD_PYRNV|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum neutrophilum (strain DSM

Query: 1 VVGDLVEIKG 10
V GDLVE+ G
Sbjct: 295 VEGDLVEVNG 304


>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 3 GDLVEIKG 10
GDLVEI G
Sbjct: 297 GDLVEING 304


>sp|Y818_METJA|UNCHARACTERIZED protein MJ0818|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GDLVEIKG 10
GD +E+KG
Sbjct: 105 GDYIEVKG 112


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain DSM

Query: 3 GDLVEIKG 10
GDLVE+ G
Sbjct: 328 GDLVEVGG 335


>sp|GATD_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 3 GDLVEIK 9
GDL+EIK
Sbjct: 21 GDLIEIK 27


>sp|GATD_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 3 GDLVEIK 9
GDL+EIK
Sbjct: 21 GDLIEIK 27


>sp|GATD_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 3 GDLVEIK 9
GDL+EIK
Sbjct: 21 GDLIEIK 27


>sp|GATD_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 3 GDLVEIK 9
GDL+EIK
Sbjct: 21 GDLIEIK 27


>sp|GATD_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 3 GDLVEIK 9
GDL+EIK
Sbjct: 21 GDLIEIK 27


>sp|GATD_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 3 GDLVEIK 9
GDL+EIK
Sbjct: 21 GDLIEIK 27


>sp|GATD_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus solfataricus (strain

Query: 3 GDLVEIK 9
GDL+EIK
Sbjct: 21 GDLIEIK 27


>sp|SODF_ACIAM|SUPEROXIDE dismutase [Fe]|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 VVGDLVE 7
V+GDL+E
Sbjct: 105 VIGDLIE 111


>sp|RPO5_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo5|Pyrococcus horikoshii (strain ATCC

Query: 3 GDLVEIK 9
GD++EIK
Sbjct: 58 GDIIEIK 64


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 VGDLVEIK 9
VGDL+E K
Sbjct: 438 VGDLIEAK 445


>sp|RPO5_THESM|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermococcus sibiricus (strain DSM

Query: 3 GDLVEIK 9
GD++EIK
Sbjct: 58 GDIIEIK 64


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GDLVEIKG 10
GD+++IKG
Sbjct: 309 GDVIKIKG 316


>sp|TRUD_PYRAR|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum arsenaticum (strain DSM

Query: 3 GDLVEIKG 10
GDLVE+ G
Sbjct: 297 GDLVEVGG 304


>sp|RPO5_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo5|Pyrococcus abyssi (strain GE5 /

Query: 3 GDLVEIK 9
GD++EIK
Sbjct: 58 GDIIEIK 64


>sp|HEM1_SULAC|GLUTAMYL-TRNA reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VVGDLVEIK 9
V+GDL +IK
Sbjct: 174 VMGDLTDIK 182


>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 1 VVGDLVEI 8
V GDLVEI
Sbjct: 295 VEGDLVEI 302


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 1 VVGDLVEIK 9
V GDL EIK
Sbjct: 223 VAGDLWEIK 231


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 3 GDLVEIKG 10
GD++EI+G
Sbjct: 36 GDIIEIEG 43


>sp|Y2365_ARCFU|IRON-SULFUR cluster assembly SufBD family|Archaeoglobus fulgidus (strain ATCC

Query: 1 VVGDLVEIKG 10
++GD E+KG
Sbjct: 267 IIGDAPEVKG 276


>sp|RPO5_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermococcus kodakarensis (strain

Query: 3 GDLVEIK 9
GD++EIK
Sbjct: 58 GDVIEIK 64


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VVGDLVEIKG 10
V GD +EIKG
Sbjct: 681 VGGDALEIKG 690


>sp|GATD_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Sulfurisphaera tokodaii (strain DSM

Query: 2 VGDLVEIK 9
VGDL+E++
Sbjct: 20 VGDLIELQ 27


>sp|RL6_IGNH4|LARGE ribosomal subunit protein uL6|Ignicoccus hospitalis (strain KIN4/I

Query: 1 VVGDLVEI 8
VVGD VEI
Sbjct: 108 VVGDRVEI 115


>sp|R15PI_METJA|RIBOSE 1,5-bisphosphate isomerase|Methanocaldococcus jannaschii (strain

Query: 1 VVGDLVEIK 9
+VG+L+EI+
Sbjct: 240 IVGELIEIE 248


>sp|Y981_METJA|UNCHARACTERIZED protein MJ0981|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VGDLVEIKG 10
VGD +EI G
Sbjct: 80 VGDTIEIDG 88




37|Sequence|181|190|VEIKGGDRVP

>sp|HCGE_METTM|GUANYLYLPYRIDINOL adenylase HcgE|Methanothermobacter marburgensis (strain ATCC

Query: 1 VEIKGGDRVP 10
VEI GGD +P
Sbjct: 107 VEIAGGDTLP 116


>sp|SYH_METS5|HISTIDINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VEIKGGDRVP 10
VE+ GG+R P
Sbjct: 301 VEVYGGNRTP 310


>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii (strain

Query: 2 EIKGGDRVP 10
E+K GDR+P
Sbjct: 186 ELKIGDRIP 194


>sp|Y1020_METJA|UNCHARACTERIZED protein MJ1020|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VEIKGGDRVP 10
VEIK GD P
Sbjct: 199 VEIKEGDEKP 208


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VEIKGGD 7
VE+KGGD
Sbjct: 800 VEVKGGD 806


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 VEIKGGD 7
VE+KGGD
Sbjct: 802 VEVKGGD 808


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 VEIKGGD 7
VE+KGGD
Sbjct: 802 VEVKGGD 808


>sp|GPDA_ARCFU|NADP(+)-DEPENDENT glycerol-3-phosphate dehydrogenase|Archaeoglobus fulgidus (strain

Query: 1 VEIKGGDR 8
+EI GGDR
Sbjct: 232 IEILGGDR 239


>sp|TRKA_METJA|TRK system potassium uptake protein|Methanocaldococcus jannaschii

Query: 2 EIKGGDRV 9
E+K GDRV
Sbjct: 192 ELKSGDRV 199


>sp|GATB_SACS2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 1 VEIKGGDRV 9
+ +KGG+RV
Sbjct: 199 ISVKGGERV 207


>sp|CMR1_SACS2|CRISPR system CMR subunit Cmr1|Saccharolobus solfataricus (strain ATCC

Query: 1 VEIKGGDRVP 10
+EI+G ++P
Sbjct: 131 IEIEGSTKIP 140


>sp|COFH2_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina mazei (strain ATCC

Query: 3 IKGGDRVP 10
IKG RVP
Sbjct: 344 IKGAGRVP 351


>sp|DAPAL_THEAC|UNCHARACTERIZED DapA-like lyase Ta1157|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 IKGGDRVP 10
IKGG R P
Sbjct: 262 IKGGYRAP 269


>sp|T2M2_METJA|TYPE II restriction enzyme MjaII|Methanocaldococcus jannaschii (strain

Query: 2 EIKGGDRVP 10
++K G+R+P
Sbjct: 114 DLKSGERLP 122


>sp|COFH2_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina acetivorans (strain

Query: 3 IKGGDRVP 10
IKG RVP
Sbjct: 344 IKGAGRVP 351


>sp|PYRE_PYRFU|OROTATE phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EIKGGDRV 9
E+K GDRV
Sbjct: 106 EVKEGDRV 113


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 VEIKGGDRVP 10
+E+K GD VP
Sbjct: 983 LEVKIGDAVP 992


>sp|RS17_PYRAE|SMALL ribosomal subunit protein uS17|Pyrobaculum aerophilum (strain

Query: 1 VEIKGGDRV 9
+E+K GD+V
Sbjct: 80 IEVKPGDKV 88


>sp|CH60_METAC|CHAPERONIN GroEL|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VEIKGGDRV 9
VE+KG D++
Sbjct: 135 VEVKGKDKI 143


>sp|PMDHS_METJA|PHOSPHOMEVALONATE dehydratase small subunit|Methanocaldococcus jannaschii (strain

Query: 2 EIKGGDRV 9
EIK GDR+
Sbjct: 108 EIKTGDRI 115


>sp|CH60_METMA|CHAPERONIN GroEL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VEIKGGDRV 9
VE+KG D++
Sbjct: 135 VEVKGKDKI 143


>sp|AMPPA_METLZ|AMP phosphorylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VEIKGGD 7
+EI+GGD
Sbjct: 395 IEIQGGD 401


>sp|Y1517_METJA|UNCHARACTERIZED protein MJ1517|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VEIKGGDRVP 10
VE+ G +RVP
Sbjct: 18 VEVIGCERVP 27


>sp|SELB_METJA|SELENOCYSTEINE-SPECIFIC elongation factor|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EIKGGD 7
EIKGGD
Sbjct: 335 EIKGGD 340


>sp|AMPPA_METB6|AMP phosphorylase|Methanoregula boonei (strain DSM 21154

Query: 1 VEIKGGD 7
+EI+GGD
Sbjct: 396 IEIQGGD 402


>sp|PYRE_THEKO|OROTATE phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 EIKGGDRV 9
E+K GD+V
Sbjct: 109 EVKAGDKV 116


>sp|Y796_METKA|UPF0288 protein MK0796|Methanopyrus kandleri (strain AV19 /

Query: 2 EIKGGDRV 9
E++GG+RV
Sbjct: 161 ELRGGERV 168


>sp|FTSZ_THEAC|CELL division protein FtsZ|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 KGGDRV 9
KGGDR+
Sbjct: 263 KGGDRI 268


>sp|RL1_THEAC|LARGE ribosomal subunit protein uL1|Thermoplasma acidophilum (strain ATCC

Query: 1 VEIKGGD 7
VEIK GD
Sbjct: 209 VEIKAGD 215


>sp|AMPPA_METMJ|AMP phosphorylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VEIKGGD 7
+EI+GGD
Sbjct: 395 IEIQGGD 401


>sp|SRP19_METKA|SIGNAL recognition particle 19 kDa|Methanopyrus kandleri (strain AV19 /

Query: 1 VEIKGGDRV 9
V++KG DR+
Sbjct: 7 VKLKGKDRI 15




38|Sequence|186|195|GDRVPADLRI

>sp|PDXS_METMP|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus maripaludis

Query: 2 DRVPADLRI 10
+RVPAD+R+
Sbjct: 46 ERVPADIRV 54


>sp|PDXS_METM6|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus maripaludis

Query: 2 DRVPADLRI 10
+RVPAD+R+
Sbjct: 46 ERVPADIRV 54


>sp|PDXS_METM5|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus maripaludis

Query: 2 DRVPADLRI 10
+RVPAD+R+
Sbjct: 46 ERVPADIRV 54


>sp|PDXS_METM7|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus maripaludis

Query: 2 DRVPADLRI 10
+RVPAD+R+
Sbjct: 46 ERVPADIRV 54


>sp|PDXS_METVS|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus vannielii

Query: 2 DRVPADLRI 10
+RVPAD+R+
Sbjct: 46 ERVPADIRV 54


>sp|PDXS_METJA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanocaldococcus jannaschii

Query: 2 DRVPADLR 9
+RVPAD+R
Sbjct: 45 ERVPADIR 52


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 1 GDRVPADLR 9
G R+P D+R
Sbjct: 467 GKRIPEDIR 475


>sp|PDXS_THEVO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermoplasma volcanium (strain

Query: 2 DRVPADLR 9
+RVPAD+R
Sbjct: 52 ERVPADIR 59


>sp|PDXS_PICTO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Picrophilus torridus (strain

Query: 2 DRVPADLR 9
+RVPAD+R
Sbjct: 55 ERVPADIR 62


>sp|PDXS_THEAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermoplasma acidophilum

Query: 2 DRVPADLR 9
+RVPAD+R
Sbjct: 52 ERVPADIR 59


>sp|PDXS_META3|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus aeolicus (strain

Query: 2 DRVPADLR 9
+RVPAD+R
Sbjct: 46 ERVPADIR 53


>sp|RL10_SULAC|LARGE ribosomal subunit protein uL10|Sulfolobus acidocaldarius (strain

Query: 1 GDRVPADL 8
GD +PAD+
Sbjct: 168 GDEIPADI 175


>sp|PDXS_METLZ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanocorpusculum labreanum

Query: 2 DRVPADLR 9
+R+PAD+R
Sbjct: 45 ERIPADIR 52


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 3 RVPADLRI 10
R+PAD++I
Sbjct: 214 RLPADIKI 221


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19 /

Query: 1 GDRVPADLRI 10
GDR PA LR+
Sbjct: 350 GDRKPALLRV 359


>sp|PDXS_THEKO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus kodakarensis

Query: 3 RVPADLR 9
RVPAD+R
Sbjct: 53 RVPADIR 59


>sp|PDXS_THEGJ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus gammatolerans

Query: 3 RVPADLR 9
RVPAD+R
Sbjct: 53 RVPADIR 59


>sp|TYSY_METMA|PUTATIVE thymidylate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DRVPAD 7
DR+PAD
Sbjct: 58 DRIPAD 63


>sp|PDXS_METTH|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanothermobacter

Query: 2 DRVPADLR 9
++VPAD+R
Sbjct: 45 EKVPADIR 52


>sp|PDXS_METST|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanosphaera stadtmanae

Query: 2 DRVPADLR 9
+RVP+D+R
Sbjct: 45 ERVPSDIR 52


>sp|Y280_STAMF|UNCHARACTERIZED solute-binding protein Smar_0280|Staphylothermus marinus (strain

Query: 4 VPADLRI 10
VPADL++
Sbjct: 204 VPADLKV 210


>sp|PDXS_METKA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanopyrus kandleri (strain

Query: 2 DRVPADLR 9
++VPAD+R
Sbjct: 45 EKVPADIR 52


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 DRVPADLRI 10
D +P DLR+
Sbjct: 475 DIIPEDLRV 483


>sp|PURE_METTH|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanothermobacter

Query: 1 GDRVPAD 7
GD+VP+D
Sbjct: 178 GDKVPSD 184


Query: 3 RVPADLRI 10
R+P DLR+
Sbjct: 29 RIPYDLRV 36


>sp|DEGLY_PYRHO|DEGLYCASE PH1704|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RVPADL 8
RVPADL
Sbjct: 149 RVPADL 154


>sp|CSA2B_SACS2|CRISPR-ASSOCIATED aCascade subunit Cas7/Csa2 2|Saccharolobus solfataricus (strain

Query: 1 GDRVPADL 8
GD +PA L
Sbjct: 148 GDEIPAQL 155


>sp|PDXS_ARCFU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Archaeoglobus fulgidus (strain

Query: 3 RVPADLR 9
+VPAD+R
Sbjct: 53 KVPADIR 59


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 RVPADL 8
RVPADL
Sbjct: 638 RVPADL 643


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 3 RVPADL 8
RVPADL
Sbjct: 638 RVPADL 643


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 3 RVPADL 8
RVPADL
Sbjct: 638 RVPADL 643


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 RVPADL 8
RVPADL
Sbjct: 638 RVPADL 643


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 RVPADL 8
RVPADL
Sbjct: 638 RVPADL 643


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 RVPADL 8
RVPADL
Sbjct: 638 RVPADL 643


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 RVPADL 8
RVPADL
Sbjct: 638 RVPADL 643


>sp|PDXS_METMA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanosarcina mazei (strain

Query: 4 VPADLR 9
VPADLR
Sbjct: 55 VPADLR 60


>sp|PDXS_PYRHO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus horikoshii (strain

Query: 3 RVPADLR 9
+VPAD+R
Sbjct: 53 KVPADIR 59


>sp|PDXS_PYRFU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus furiosus (strain

Query: 3 RVPADLR 9
+VPAD+R
Sbjct: 53 KVPADIR 59


>sp|PDXS_THEON|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus onnurineus

Query: 3 RVPADLR 9
+VPAD+R
Sbjct: 53 KVPADIR 59


>sp|DNAK_METTH|CHAPERONE protein DnaK|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GDRVPAD 7
GD+VPA+
Sbjct: 533 GDKVPAE 539


>sp|PDXS_PYRAB|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus abyssi (strain GE5

Query: 3 RVPADLR 9
+VPAD+R
Sbjct: 53 KVPADIR 59




39|Sequence|191|200|ADLRIISAHG

>sp|MDH_PYRAB|MALATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 ADLRIISAHG 10
ADLR I +HG
Sbjct: 47 ADLRGIESHG 56


>sp|MDH_PYRHO|MALATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ADLRIISAHG 10
ADLR + +HG
Sbjct: 47 ADLRGVESHG 56


>sp|PMD_HALVD|PHOSPHOMEVALONATE decarboxylase|Haloferax volcanii (strain ATCC 29605

Query: 2 DLRIISAH 9
DLRI++AH
Sbjct: 172 DLRIVAAH 179


>sp|DCDA_ARCFU|DIAMINOPIMELATE decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ADLRIISAHG 10
A +RII++HG
Sbjct: 62 ALMRIIASHG 71


>sp|CSX1_SACS2|CRISPR system endoribonuclease Csx1|Saccharolobus solfataricus (strain

Query: 2 DLRIISAHG 10
D RI+ AHG
Sbjct: 338 DKRILYAHG 346


>sp|PURE_METTH|PROBABLE N5-carboxyaminoimidazole ribonucleotide

Query: 2 DLRIISAH 9
DLR+ SAH
Sbjct: 33 DLRVASAH 40


>sp|Y977_METKA|UNCHARACTERIZED glycosyltransferase MK0977|Methanopyrus kandleri (strain AV19 /

Query: 1 ADLRIISAHG 10
AD R+I HG
Sbjct: 72 ADRRVIRRHG 81


>sp|RL14_HALMA|LARGE ribosomal subunit protein uL14|Haloarcula marismortui (strain

Query: 2 DLRIISAHG 10
+L++IS HG
Sbjct: 28 ELKVISVHG 36


>sp|OTC_IGNH4|ORNITHINE carbamoyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 ADLRIISAHG 10
AD+RI++A G
Sbjct: 180 ADVRIVTAPG 189


>sp|DNAG_METLZ|DNA primase DnaG|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 DLRIISAHG 10
D++I+S HG
Sbjct: 57 DVQIVSKHG 65


>sp|COMC_METTH|L-SULFOLACTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ADLRIISAHG 10
ADL+ S+HG
Sbjct: 36 ADLKGFSSHG 45




40|Sequence|196|205|ISAHGCKVDN

>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 ISAHGCKVDN 10
I+AHGC +D+
Sbjct: 254 IAAHGCWLDD 263


>sp|Y977_METKA|UNCHARACTERIZED glycosyltransferase MK0977|Methanopyrus kandleri (strain AV19 /

Query: 1 ISAHGCKV 8
I HGCKV
Sbjct: 77 IRRHGCKV 84


>sp|Y474_PYRAB|UPF0292 protein PYRAB04740|Pyrococcus abyssi (strain GE5 /

Query: 1 ISAHGCKVD 9
+ +GCKVD
Sbjct: 85 LEGYGCKVD 93


>sp|Y1700_PYRHO|UPF0292 protein PH1700|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ISAHGCKVD 9
+ +GCKVD
Sbjct: 85 LEGYGCKVD 93


>sp|AROA_THEAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 2 SAHGCKVDN 10
S HG ++DN
Sbjct: 305 SEHGVEIDN 313


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 1 ISAHGCKVD 9
+SAH KVD
Sbjct: 218 VSAHTLKVD 226


>sp|CETZ5_HALVD|TUBULIN-LIKE protein CetZ5|Haloferax volcanii (strain ATCC 29605

Query: 1 ISAHGCKVDN 10
+S HG DN
Sbjct: 63 VSGHGVGADN 72


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ISAHGC 6
++AHGC
Sbjct: 261 VAAHGC 266


>sp|AROA_METJA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocaldococcus jannaschii (strain

Query: 2 SAHGCKV 8
S HGC++
Sbjct: 53 SVHGCRM 59




41|Sequence|201|210|CKVDNSSLTG

>sp|KDGK_SACS2|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE solfataricus (strain ATCC 35092

Query: 2 KVDNSSLTG 10
KVDN S TG
Sbjct: 80 KVDNESFTG 88


>sp|RADB_THEVO|DNA repair and recombination protein|Thermoplasma volcanium (strain

Query: 1 CKVDNSSL 8
CK DNS L
Sbjct: 80 CKADNSKL 87


>sp|RIB7_SACS2|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Saccharolobus solfataricus (strain ATCC

Query: 2 KVDNSSLT 9
+VDN SLT
Sbjct: 55 RVDNPSLT 62


>sp|URIC_HALVD|URICASE volcanii (strain ATCC 29605

Query: 2 KVDNSSLTG 10
KV+ SS TG
Sbjct: 171 KVEGSSFTG 179


>sp|IF6_THEAC|TRANSLATION initiation factor 6|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VDNSSLTG 10
+DNSSL G
Sbjct: 51 IDNSSLIG 58




42|Sequence|206|215|SSLTGESEPQ

>sp|COBS_HALLT|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 SSLTGESEP 9
S+LTGES P
Sbjct: 173 SALTGESSP 181


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 SSLTGESEP 9
S++TGESEP
Sbjct: 161 SAITGESEP 169


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 SSLTGESEP 9
S++TGESEP
Sbjct: 161 SAITGESEP 169


>sp|MTQ2_METJA|RELEASE factor glutamine methyltransferase Mtq2|Methanocaldococcus

Query: 1 SSLTGESE 8
SSLTGE E
Sbjct: 157 SSLTGEKE 164


>sp|NADM_CALMQ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 LTGESEPQ 10
+TGE+EP
Sbjct: 169 ITGEAEPH 176


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LTGESEP 9
LTGES+P
Sbjct: 241 LTGESKP 247


>sp|SYC_HALMA|CYSTEINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SSLTGESEP 9
++LTGE EP
Sbjct: 7 NTLTGEKEP 15


>sp|NIFE_METBA|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanosarcina

Query: 2 SLTGESEPQ 10
S+TG+S P+
Sbjct: 235 SMTGDSTPK 243




43|Sequence|211|220|ESEPQTRSPD

>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 PQTRSPD 10
PQTR PD
Sbjct: 264 PQTRDPD 270


>sp|KTHY_METTH|PROBABLE thymidylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 2 SEPQTRSPD 10
S P R+PD
Sbjct: 51 SSPDARTPD 59


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 2 SEPQTRSP 9
SEP RSP
Sbjct: 164 SEPDMRSP 171


>sp|GATB_METB6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanoregula boonei (strain DSM 21154

Query: 2 SEPQTRSP 9
SEP RSP
Sbjct: 161 SEPDMRSP 168


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 ESEPQTRSP 9
E EP+ R+P
Sbjct: 603 EDEPEERNP 611


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 ESEPQTRSP 9
E EP+ R+P
Sbjct: 606 EDEPEERNP 614


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ESEPQTRSP 9
E EP+ R+P
Sbjct: 603 EDEPEERNP 611




44|Sequence|216|225|TRSPDCTHDN

>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 3 SPDCTHD 9
+PDC H+
Sbjct: 145 NPDCMHE 151


>sp|ARSM_HALSA|ARSENITE methyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 RSPDCT 7
RSPDCT
Sbjct: 70 RSPDCT 75


>sp|RS27_PYRAE|SMALL ribosomal subunit protein eS27|Pyrobaculum aerophilum (strain

Query: 1 TRSPDCTHD 9
TR PDC ++
Sbjct: 20 TRCPDCGNE 28


>sp|RSGA_METAC|SMALL ribosomal subunit biogenesis GTPase|Methanosarcina acetivorans

Query: 5 DCTHDN 10
DCTH N
Sbjct: 298 DCTHRN 303


>sp|VORA_METTH|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter

Query: 2 RSPDCTHD 9
R PD HD
Sbjct: 7 RKPDSLHD 14


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 2 RSPDCTHDN 10
++ CTHD+
Sbjct: 110 KTEKCTHDD 118


>sp|PYRB_METHJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanospirillum hungatei

Query: 4 PDCTHDN 10
PD HDN
Sbjct: 187 PDSIHDN 193


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 2 RSPDCTHDN 10
++ CTHD+
Sbjct: 110 KTEKCTHDD 118


>sp|TRPD_HALSA|ANTHRANILATE phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 TRSPDCT 7
T +PDCT
Sbjct: 65 TVAPDCT 71


>sp|TRPD_HALS3|ANTHRANILATE phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 TRSPDCT 7
T +PDCT
Sbjct: 65 TVAPDCT 71


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 2 RSPDCTHDN 10
++ CTHD+
Sbjct: 110 KTEKCTHDD 118


>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 2 RSPDCTHDN 10
++ CTHD+
Sbjct: 110 KTEKCTHDD 118


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 2 RSPDCTHDN 10
++ DC HD+
Sbjct: 576 KNEDCPHDS 584


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 2 RSPDCTHDN 10
++ DC HD+
Sbjct: 576 KNEDCPHDS 584


>sp|RS27_ARCFU|SMALL ribosomal subunit protein eS27|Archaeoglobus fulgidus (strain

Query: 2 RSPDCTHD 9
+ PDC H+
Sbjct: 9 KCPDCEHE 16




45|Sequence|221|230|CTHDNPLETR

>sp|AROE_METMA|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 NPLETR 10
NPLETR
Sbjct: 225 NPLETR 230


>sp|AROE_METBF|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 5 NPLETR 10
NPLETR
Sbjct: 225 NPLETR 230


>sp|AROE_METAC|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina acetivorans (strain ATCC

Query: 5 NPLETR 10
NPLETR
Sbjct: 225 NPLETR 230


>sp|DHA_METMP|ALANINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 THDNP 6
THDNP
Sbjct: 283 THDNP 287


>sp|HTAXP_HALS3|HEAT repeat-containing taxis protein OE_2401F|Halobacterium salinarum

Query: 1 CTHDNPLETR 10
C H PL+ R
Sbjct: 165 CLHGEPLKVR 174


>sp|Y1718_ARCFU|UNCHARACTERIZED protein AF_1718|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 THDNPLETR 10
TH+ PLE R
Sbjct: 48 THEAPLEKR 56


>sp|TF2B5_HALSA|TRANSCRIPTION initiation factor IIB 5|Halobacterium salinarum (strain ATCC 700922

Query: 1 CTHDNPL 7
C HD PL
Sbjct: 273 CVHDAPL 279


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 THDNPL 7
T+DNPL
Sbjct: 448 TYDNPL 453




46|Sequence|226|235|PLETRNITFF

>sp|IDI2_METBU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PLETRNIT 8
P+E+RN+T
Sbjct: 18 PVESRNVT 25


>sp|RSMA_METMA|PROBABLE ribosomal RNA small subunit|Methanosarcina mazei (strain ATCC

Query: 1 PLETRNITFF 10
P E R+ TFF
Sbjct: 192 PFEVRDETFF 201


>sp|HIS7_METKA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 1 PLETRNITFF 10
PL T N++ F
Sbjct: 134 PLSTENVSHF 143


>sp|SPH1_HALSA|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 700922

Query: 1 PLETRNI 7
PLET NI
Sbjct: 138 PLETENI 144


>sp|SPH1_HALS3|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 29341

Query: 1 PLETRNI 7
PLET NI
Sbjct: 138 PLETENI 144


>sp|TRIN_SULTO|PUTATIVE Tricorn-like protease N-terminal subunit|Sulfurisphaera tokodaii

Query: 3 ETRNITFF 10
ET+ ITFF
Sbjct: 96 ETKRITFF 103


>sp|SPH1_HALSI|SMC-LIKE protein Sph1|Halobacterium salinarum (Halobacterium halobium)

Query: 1 PLETRNI 7
PLET NI
Sbjct: 138 PLETENI 144


>sp|TRPD_THEAC|ANTHRANILATE phosphoribosyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 PLETRNI 7
PLE RNI
Sbjct: 245 PLERRNI 251


>sp|PIWI_ARCFU|PIWI protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LETRNITFF 10
L RN+TF+
Sbjct: 144 LSNRNLTFY 152




47|Sequence|231|240|NITFFSTNCV

>sp|SEPS_ARCFU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TFFSTNCV 10
T+FS +CV
Sbjct: 228 TYFSASCV 235


>sp|SEPS_METMA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ITFFSTNCV 10
+T++S +CV
Sbjct: 229 MTYYSASCV 237


>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 ITFFSTNCV 10
+T++S +CV
Sbjct: 229 MTYYSASCV 237


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ITFFSTNCV 10
+T++S +CV
Sbjct: 229 MTYYSASCV 237


>sp|SEPS_METAC|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ITFFSTNCV 10
+T++S +CV
Sbjct: 229 MTYYSASCV 237


>sp|TFE_METJA|TRANSCRIPTION factor E|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NITFFSTNC 9
N+ FF NC
Sbjct: 112 NMFFFCPNC 120


>sp|FLAX_SULAC|ARCHAEAL flagellar motor scaffold protein|Sulfolobus acidocaldarius (strain

Query: 1 NITFFSTNCV 10
N+T+F +CV
Sbjct: 163 NLTWFIKSCV 172




48|Sequence|236|245|STNCVEGTAR

>sp|DLDH_HALVD|DIHYDROLIPOYL dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 3 NCVEGTAR 10
N VEGTAR
Sbjct: 112 NLVEGTAR 119


>sp|OGT_SACS2|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 NCVEGTAR 10
+CVEG +R
Sbjct: 30 DCVEGNSR 37


>sp|OGT_SACI7|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 NCVEGTAR 10
+CVEG +R
Sbjct: 30 DCVEGNSR 37


>sp|OGT_SACI6|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 NCVEGTAR 10
+CVEG +R
Sbjct: 30 DCVEGNSR 37


>sp|OGT_SACI4|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 NCVEGTAR 10
+CVEG +R
Sbjct: 30 DCVEGNSR 37


>sp|OGT_SACI3|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 3 NCVEGTAR 10
+CVEG +R
Sbjct: 30 DCVEGNSR 37


>sp|OGT_SACI2|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 NCVEGTAR 10
+CVEG +R
Sbjct: 30 DCVEGNSR 37


>sp|OGT_SACI1|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 NCVEGTAR 10
+CVEG +R
Sbjct: 30 DCVEGNSR 37


>sp|THYX_SULAC|FLAVIN-DEPENDENT thymidylate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 STNCVEGTAR 10
S C+EG R
Sbjct: 227 SQRCIEGVTR 236


>sp|THYX_SULTO|FLAVIN-DEPENDENT thymidylate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 STNCVEGTAR 10
S C+EG R
Sbjct: 230 SQRCIEGVMR 239


>sp|THYX_SACS2|FLAVIN-DEPENDENT thymidylate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 STNCVEGTAR 10
S C+EG R
Sbjct: 233 SQRCIEGVLR 242




49|Sequence|241|250|EGTARGVVVA

>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GTARGVVV 9
G+ARG++V
Sbjct: 109 GSARGIIV 116


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GTARGVVV 9
G+ARG+VV
Sbjct: 119 GSARGMVV 126


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GTARGVVV 9
G+ARG+VV
Sbjct: 119 GSARGMVV 126


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GTARGVVV 9
G+ARG+++
Sbjct: 116 GSARGIII 123




50|Sequence|246|255|GVVVATGDRT

>sp|NADE_STAMF|NH(3)-DEPENDENT NAD(+) synthetase|Staphylothermus marinus (strain ATCC 43588

Query: 2 VVVATGDRT 10
+VV TGDR+
Sbjct: 140 IVVGTGDRS 148


>sp|NADE_METKA|NH(3)-DEPENDENT NAD(+) synthetase|Methanopyrus kandleri (strain AV19 /

Query: 1 GVVVATGDRT 10
G+V+ TG+RT
Sbjct: 142 GLVLGTGNRT 151


>sp|NADE_THEVO|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GVVVATGDRT 10
G+VV T +RT
Sbjct: 124 GIVVGTTNRT 133


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GVVVATGDR 9
G++VA DR
Sbjct: 888 GIIVAKNDR 896


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 1 GVVVATGDR 9
G+VV T DR
Sbjct: 280 GMVVLTADR 288


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 1 GVVVATGDR 9
G+VV T DR
Sbjct: 280 GMVVLTADR 288


>sp|PURT_SACS2|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Saccharolobus

Query: 1 GVVVATGD 8
GVV+ATG+
Sbjct: 371 GVVLATGN 378


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 VVATGDRT 10
V+A GD+T
Sbjct: 93 VIAAGDKT 100


>sp|PURT_SULTO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Sulfurisphaera tokodaii

Query: 1 GVVVATGD 8
GVV+ATG+
Sbjct: 371 GVVLATGN 378


>sp|KPYK_METJA|PYRUVATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GVVVATGD 8
GV+VA GD
Sbjct: 220 GVMVARGD 227




51|Sequence|251|260|TGDRTVMGRI

>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 DRTVMG 8
DRTVMG
Sbjct: 468 DRTVMG 473


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 DRTVMG 8
DRTVMG
Sbjct: 468 DRTVMG 473


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 DRTVMG 8
DRTVMG
Sbjct: 468 DRTVMG 473


>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 DRTVMG 8
DRTVMG
Sbjct: 468 DRTVMG 473


>sp|DNLI_METAR|DNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 TGDRTVMGRI 10
TGD ++GR+
Sbjct: 462 TGDYVILGRV 471


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GDRTVMGRI 10
G+RTV+G I
Sbjct: 469 GERTVIGTI 477


>sp|RS2_METJA|SMALL ribosomal subunit protein uS2|Methanocaldococcus jannaschii

Query: 1 TGDRTVMGR 9
TG RTV GR
Sbjct: 88 TGIRTVAGR 96


>sp|HIS3_METMP|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TGDRTVMG 8
TGD TV+G
Sbjct: 118 TGDSTVIG 125


>sp|RS2_METTH|SMALL ribosomal subunit protein uS2|Methanothermobacter

Query: 1 TGDRTVMGR 9
TG RT+ GR
Sbjct: 86 TGARTIPGR 94




52|Sequence|256|265|VMGRIATLAS

>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 GRIATLAS 10
GRIA LAS
Sbjct: 28 GRIACLAS 35


>sp|ARLY_METKA|ARGININOSUCCINATE lyase|Methanopyrus kandleri (strain AV19 /

Query: 2 MGRIATLAS 10
+GR+AT AS
Sbjct: 239 LGRLATAAS 247




53|Sequence|261|270|ATLASGLEVG

>sp|RL7A_METAR|LARGE ribosomal subunit protein eL8|Methanocella arvoryzae (strain DSM

Query: 4 ASGLEVG 10
ASGLEVG
Sbjct: 89 ASGLEVG 95




54|Sequence|266|275|GLEVGKTPIA

>sp|MPGS_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GLEVGKTPIA 10
GL+ GK PIA
Sbjct: 284 GLQAGKCPIA 293


>sp|GFCR_METBU|TRANSCRIPTIONAL regulator GfcR|Methanococcoides burtonii (strain DSM 6242

Query: 3 EVGKTPIA 10
EVG TPIA
Sbjct: 168 EVGATPIA 175


>sp|RS3_NATPD|SMALL ribosomal subunit protein uS3|Natronomonas pharaonis (strain ATCC

Query: 1 GLEVGKTPI 9
G+EV KTP+
Sbjct: 32 GMEVAKTPM 40


>sp|RS3_SACS2|SMALL ribosomal subunit protein uS3|Saccharolobus solfataricus (strain

Query: 1 GLEVGKTPI 9
G+EV KTPI
Sbjct: 33 GVEVLKTPI 41


>sp|RS3A_PYRFU|SMALL ribosomal subunit protein eS1|Pyrococcus furiosus (strain ATCC

Query: 1 GLEVGKTP 8
G+EVG TP
Sbjct: 29 GVEVGLTP 36


>sp|PYRE_METJA|OROTATE phosphoribosyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 GLEVGKTPIA 10
G+E+G PIA
Sbjct: 66 GVELGSVPIA 75


>sp|RS3_SULTO|SMALL ribosomal subunit protein uS3|Sulfurisphaera tokodaii (strain DSM

Query: 1 GLEVGKTPI 9
G+E+ KTPI
Sbjct: 33 GVEIVKTPI 41


>sp|RS3_SULAC|SMALL ribosomal subunit protein uS3|Sulfolobus acidocaldarius (strain

Query: 1 GLEVGKTPI 9
G+E+ KTPI
Sbjct: 33 GVEIVKTPI 41


>sp|PYRE_METAR|OROTATE phosphoribosyltransferase|Methanocella arvoryzae (strain DSM

Query: 1 GLEVGKTPIA 10
G+E+G P+A
Sbjct: 64 GIEIGSIPLA 73


>sp|RS3_METAR|SMALL ribosomal subunit protein uS3|Methanocella arvoryzae (strain DSM

Query: 1 GLEVGKTPI 9
G+E+ +TP+
Sbjct: 32 GMEINRTPM 40


>sp|RS3_PYRHO|SMALL ribosomal subunit protein uS3|Pyrococcus horikoshii (strain ATCC

Query: 1 GLEVGKTPI 9
GL++ KTP+
Sbjct: 32 GLDIKKTPL 40


>sp|RS3_THEKO|SMALL ribosomal subunit protein uS3|Thermococcus kodakarensis (strain

Query: 1 GLEVGKTPI 9
GL++ KTP+
Sbjct: 32 GLDIKKTPL 40


>sp|RS3_THESM|SMALL ribosomal subunit protein uS3|Thermococcus sibiricus (strain DSM

Query: 1 GLEVGKTPI 9
GL++ KTP+
Sbjct: 32 GLDIKKTPL 40


>sp|RS3_PYRAB|SMALL ribosomal subunit protein uS3|Pyrococcus abyssi (strain GE5 /

Query: 1 GLEVGKTPI 9
GL++ KTP+
Sbjct: 32 GLDIKKTPL 40


>sp|RS3A_PYRAB|SMALL ribosomal subunit protein eS1|Pyrococcus abyssi (strain GE5 /

Query: 1 GLEVGKTP 8
G+EVG TP
Sbjct: 30 GVEVGLTP 37


>sp|RS3_PYRFU|SMALL ribosomal subunit protein uS3|Pyrococcus furiosus (strain ATCC

Query: 1 GLEVGKTPI 9
GL++ KTP+
Sbjct: 32 GLDIKKTPL 40


>sp|SUCD2_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Archaeoglobus fulgidus (strain

Query: 1 GLEVGKTPI 9
G VGKTP+
Sbjct: 269 GARVGKTPM 277


>sp|RS3A_PYRHO|SMALL ribosomal subunit protein eS1|Pyrococcus horikoshii (strain ATCC

Query: 1 GLEVGKTP 8
G+EVG TP
Sbjct: 31 GVEVGLTP 38


>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GLEVGKTPI 9
GLE TPI
Sbjct: 322 GLETSTTPI 330


>sp|PYRE_PICTO|OROTATE phosphoribosyltransferase|Picrophilus torridus (strain ATCC

Query: 1 GLEVGKTPI 9
G+E+G PI
Sbjct: 59 GMELGSVPI 67


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 3 EVGKTPI 9
EVGK PI
Sbjct: 515 EVGKKPI 521




55|Sequence|271|280|KTPIAIEIEH

>sp|RPIA_AERPE|RIBOSE-5-PHOSPHATE isomerase A|Aeropyrum pernix (strain ATCC 700893

Query: 1 KTPIAIEIE 9
KTP+ +E+E
Sbjct: 134 KTPVPVEVE 142


>sp|GSA_HALSA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 700922

Query: 2 TPIAIEIEH 10
TP IE+EH
Sbjct: 88 TPTEIEVEH 96


>sp|GSA_HALS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 29341

Query: 2 TPIAIEIEH 10
TP IE+EH
Sbjct: 88 TPTEIEVEH 96


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KTPIAIEIE 9
KTP+A EIE
Sbjct: 18 KTPVAEEIE 26


>sp|GSA_ARCFU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TPIAIEIEH 10
TPI +EIE+
Sbjct: 86 TPIELEIEY 94


>sp|GSA_METTP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 TPIAIEIE 9
TP A+E+E
Sbjct: 96 TPTALEVE 103


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 KTPIAIEIE 9
+TP+ IE+E
Sbjct: 42 RTPLGIEME 50


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KTPIAIEIEH 10
+TPI ++EH
Sbjct: 268 ETPIMYDMEH 277


>sp|DP2S_METTH|DNA polymerase II small subunit|Methanothermobacter thermautotrophicus

Query: 1 KTPIAIEIE 9
+TP+A EIE
Sbjct: 405 RTPLASEIE 413




56|Sequence|276|285|IEIEHFIQLI

>sp|MDH_PYRHO|MALATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IEIEHFIQL 9
I+IEHFI L
Sbjct: 285 IDIEHFIPL 293


>sp|TRPA_METAC|TRYPTOPHAN synthase alpha chain|Methanosarcina acetivorans (strain ATCC

Query: 1 IEIEHFIQLI 10
++IEH+ +L+
Sbjct: 87 MDIEHYFELV 96


>sp|SPT5_THEKO|TRANSCRIPTION elongation factor Spt5|Thermococcus kodakarensis (strain ATCC

Query: 2 EIEHFIQ 8
EIEHF++
Sbjct: 79 EIEHFLE 85




57|Sequence|281|290|FIQLITGVAV

>sp|DPDH_PYRIL|D-PROLINE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FIQLITGVAV 10
FI++ GVAV
Sbjct: 249 FIEMTKGVAV 258


>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 FIQLITGVA 9
FIQ +TG A
Sbjct: 489 FIQSVTGTA 497


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 2 IQLITGV 8
+QL+TGV
Sbjct: 146 VQLVTGV 152




58|Sequence|286|295|TGVAVFLGVS

>sp|CBIF_METJA|COBALT-PRECORRIN-4 C(11)-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VAVFLGVS 10
+A+FLGVS
Sbjct: 164 MAIFLGVS 171


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 1 TGVAVFLG 8
TG+A+F+G
Sbjct: 85 TGLALFVG 92


>sp|GLCD1_VULM7|GLUCOSE 1-dehydrogenase 1|Vulcanisaeta moutnovskia (strain 768-28)

Query: 2 GVAVFLGV 9
GVAV LG+
Sbjct: 260 GVAVLLGI 267


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 TGVAVFLGVS 10
TG+ FLG S
Sbjct: 105 TGILGFLGTS 114


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 TGVAVFLGVS 10
TG+ FLG S
Sbjct: 105 TGILGFLGTS 114


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 TGVAVFLGVS 10
TG+ FLG S
Sbjct: 105 TGILGFLGTS 114


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 TGVAVFLGVS 10
TG+ FLG S
Sbjct: 105 TGILGFLGTS 114


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 TGVAVFLGVS 10
TG+ FLG S
Sbjct: 105 TGILGFLGTS 114


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 TGVAVFLGVS 10
TG+ FLG S
Sbjct: 105 TGILGFLGTS 114


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 TGVAVFLGVS 10
TG+ FLG S
Sbjct: 105 TGILGFLGTS 114




59|Sequence|291|300|FLGVSFFILS

>sp|ARCSA_THEAC|ARCHAEOSINE synthase subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FLGVSFF 7
+LG+SFF
Sbjct: 114 YLGISFF 120


>sp|Y2132_ARCFU|UNCHARACTERIZED protein AF_2132|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FLGVSFFI 8
FLG+SFF+
Sbjct: 130 FLGISFFV 137


>sp|AGLD_HALVD|GLYCOSYLTRANSFERASE AglD|Haloferax volcanii (strain ATCC 29605

Query: 1 FLGVSFFILS 10
+GVSFF +S
Sbjct: 527 LVGVSFFAVS 536


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LGVSFFIL 9
LG+ +FIL
Sbjct: 484 LGIKYFIL 491




60|Sequence|296|305|FFILSLILGY

>sp|Y275_METJA|UNCHARACTERIZED protein MJ0275|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FFILSLIL 8
FILSLIL
Sbjct: 11 LFILSLIL 18


>sp|COBS_METJA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FFILSLILGY 10
F I SLILGY
Sbjct: 45 FGIFSLILGY 54




61|Sequence|301|310|LILGYTWLEA

>sp|Y1182_METJA|UNCHARACTERIZED protein MJ1182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ILGYTWL 8
++GYTW+
Sbjct: 201 MIGYTWI 207


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LILGYTWLEA 10
L +GYT LEA
Sbjct: 354 LTIGYTELEA 363


>sp|HMDH_SACS2|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GYTWLE 9
GYTW E
Sbjct: 315 GYTWTE 320


>sp|FTRL_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter

Query: 4 GYTWLE 9
GY WLE
Sbjct: 128 GYEWLE 133


>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 1 LILGYTW 7
LI+GY W
Sbjct: 67 LIVGYEW 73


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 3 LGYTWLE 9
+GYTW E
Sbjct: 324 MGYTWTE 330


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 YTWLEA 10
Y WLEA
Sbjct: 247 YVWLEA 252


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YTWLEA 10
Y WLEA
Sbjct: 245 YVWLEA 250


>sp|Y1233_METJA|UNCHARACTERIZED protein MJ1233|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LGYTWLEA 10
LGYT +EA
Sbjct: 145 LGYTAIEA 152


>sp|SECY_AERPE|PROTEIN translocase subunit SecY|Aeropyrum pernix (strain ATCC 700893

Query: 1 LILGYTWLE 9
++ GY W+E
Sbjct: 346 IVFGYMWVE 354


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 4 GYTWLE 9
GY W+E
Sbjct: 842 GYNWVE 847


>sp|FTRL_METTM|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter marburgensis

Query: 4 GYTWLE 9
GY W+E
Sbjct: 128 GYEWIE 133


>sp|FAU1_THEPD|PROBABLE ribonuclease FAU-1|Thermofilum pendens (strain DSM 2475

Query: 1 LILGYTWL 8
+I YTWL
Sbjct: 365 VIRSYTWL 372


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LILGYTWLE 9
L+ GY W+E
Sbjct: 360 LLFGYLWVE 368


>sp|CDPAS_AERPE|CDP-ARCHAEOL synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 LGYTW 7
LGYTW
Sbjct: 137 LGYTW 141




62|Sequence|306|315|TWLEAVIFLI

>sp|PYRDB_PYRFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus furiosus (strain

Query: 1 TWLEAVIFLI 10
TW +AV FL+
Sbjct: 242 TWQDAVEFLL 251


>sp|PYRDB_PYRAB|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus abyssi (strain GE5 /

Query: 1 TWLEAVIFLI 10
TW +AV FL+
Sbjct: 241 TWQDAVEFLL 250


>sp|ARNR_SULAC|HTH-TYPE transcriptional activator ArnR|Sulfolobus acidocaldarius (strain

Query: 2 WLEAVIFL 9
WL AVIFL
Sbjct: 250 WLYAVIFL 257


>sp|BACS_HALSD|SENSORY rhodopsin|Halorubrum sodomense

Query: 2 WLEAVIFLI 10
WL AV FLI
Sbjct: 10 WLAAVAFLI 18


>sp|PYRDB_THEKO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermococcus kodakarensis

Query: 1 TWLEAVIFLI 10
TW +AV FL+
Sbjct: 245 TWQDAVEFLL 254


>sp|LYSJ_AERPE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 WLEAVIFL 9
W E ++FL
Sbjct: 90 WAEEIVFL 97




63|Sequence|311|320|VIFLIGIIVA

>sp|Y872_METJA|UNCHARACTERIZED lipoprotein MJ0872|Methanocaldococcus jannaschii (strain ATCC

Query: 2 IFLIGIIVA 10
I +IG+IVA
Sbjct: 9 ILMIGVIVA 17


>sp|DIPPS_THEKO|BIFUNCTIONAL IPC transferase and DIPP|Thermococcus kodakarensis (strain ATCC

Query: 1 VIFLIGIIVA 10
V FL+GII A
Sbjct: 262 VTFLLGIISA 271




64|Sequence|316|325|GIIVANVPEG

>sp|Y2135_ARCFU|UNCHARACTERIZED protein AF_2135|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GIIVANVPEG 10
GI+V +VPEG
Sbjct: 58 GILVPDVPEG 67


>sp|SURE_METAR|5'-NUCLEOTIDASE SurE|Methanocella arvoryzae (strain DSM 22066

Query: 1 GIIVANVPEG 10
G IVA+ PEG
Sbjct: 219 GTIVADAPEG 228


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GIIVANVPEG 10
GII +NV EG
Sbjct: 332 GIIPSNVKEG 341


>sp|RS8_METTH|SMALL ribosomal subunit protein uS8|Methanothermobacter

Query: 1 GIIVANVPEG 10
GII+ + PEG
Sbjct: 100 GIIIVSTPEG 109


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GIIVANVPEG 10
GII +NV EG
Sbjct: 333 GIIPSNVKEG 342


>sp|RS8_METS3|SMALL ribosomal subunit protein uS8|Methanobrevibacter smithii (strain

Query: 1 GIIVANVPEG 10
GI++ PEG
Sbjct: 100 GILIVTTPEG 109


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 GIIVANVPEG 10
GI+ +NV EG
Sbjct: 341 GIVPSNVKEG 350


>sp|DNLI_THEVO|DNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 IVANVPE 9
IV+N+PE
Sbjct: 70 IVSNIPE 76


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GIIVANVPEG 10
GI+ +NV EG
Sbjct: 341 GIVPSNVKEG 350


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 GIIVANVPEG 10
GI+ +NV EG
Sbjct: 341 GIVPSNVKEG 350


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GIIVANVPEG 10
GI+ +NV EG
Sbjct: 341 GIVPSNVKEG 350


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GIIVANVPEG 10
G+I +NV EG
Sbjct: 336 GVIPSNVKEG 345


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 GIIVANVPEG 10
GI+ +NV EG
Sbjct: 341 GIVPSNVKEG 350


>sp|PGK_THESM|PHOSPHOGLYCERATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 2 IIVANVPEG 10
IIVAN P G
Sbjct: 321 IIVANGPMG 329


>sp|PGK_PYRHO|PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IIVANVPEG 10
IIVAN P G
Sbjct: 321 IIVANGPMG 329


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GIIVANVPEG 10
GI+ +NV EG
Sbjct: 342 GIVPSNVGEG 351


>sp|PGK_PYRWO|PHOSPHOGLYCERATE kinase|Pyrococcus woesei

Query: 2 IIVANVPEG 10
IIVAN P G
Sbjct: 321 IIVANGPMG 329


>sp|PGK_PYRFU|PHOSPHOGLYCERATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IIVANVPEG 10
IIVAN P G
Sbjct: 321 IIVANGPMG 329


>sp|PGK_THEKO|PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IIVANVPEG 10
IIVAN P G
Sbjct: 321 IIVANGPMG 329


>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GIIVANVPEG 10
GIIV N P+
Sbjct: 86 GIIVVNAPDA 95


>sp|SERA_METTH|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GIIVANVPEG 10
GI+V N PE
Sbjct: 88 GIMVINAPES 97


>sp|COFE_HALLT|COENZYME F420:L-glutamate ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 GIIVANVPEG 10
GI +NVP+G
Sbjct: 111 GIDQSNVPDG 120




65|Sequence|321|330|NVPEGLLATV

>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VPEGLLATV 10
+PEG+LA +
Sbjct: 447 IPEGVLAII 455


>sp|Y1126_METTH|UNCHARACTERIZED protein MTH_1126|Methanothermobacter thermautotrophicus (strain

Query: 2 VPEGLLATV 10
VPEGL V
Sbjct: 62 VPEGLFVAV 70


>sp|Y312_METJA|UNCHARACTERIZED protein MJ0312|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PEGLLA 8
PEGLLA
Sbjct: 158 PEGLLA 163


>sp|THIM_METMJ|HYDROXYETHYLTHIAZOLE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VPEGLLATV 10
+P GLLA V
Sbjct: 18 IPAGLLAAV 26


>sp|Y601_METMP|PROBABLE minor pilin MMP0601|Methanococcus maripaludis (strain DSM 14266

Query: 1 NVPEGLLATV 10
N+PEG+ V
Sbjct: 252 NIPEGIKCKV 261




66|Sequence|326|335|LLATVTVCLT

>sp|FOLD_NATPD|BIFUNCTIONAL protein FolD|Natronomonas pharaonis (strain ATCC 35678

Query: 3 ATVTVC 8
ATVTVC
Sbjct: 186 ATVTVC 191


>sp|FOLD_METMJ|BIFUNCTIONAL protein FolD|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 ATVTVC 8
ATVT+C
Sbjct: 177 ATVTIC 182




67|Sequence|331|340|TVCLTLTAKR

>sp|PUS10_IGNAA|TRNA pseudouridine synthase Pus10|Ignisphaera aggregans (strain DSM

Query: 1 TVCLTLTA 8
T+CLTL A
Sbjct: 416 TLCLTLDA 423


>sp|QUEE_ARCFU|7-CARBOXY-7-DEAZAGUANINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CLTLTAKR 10
CL LTA R
Sbjct: 47 CLDLTANR 54




68|Sequence|336|345|LTAKRMARKN

>sp|CPKA_PYRFU|CARBAMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TAKRMARK 9
TAKR+AR+
Sbjct: 141 TAKRLARE 148


>sp|ARGJ_METTH|GLUTAMATE N-acetyltransferase|Methanothermobacter thermautotrophicus

Query: 3 AKRMARK 9
A+RMARK
Sbjct: 89 ARRMARK 95




69|Sequence|341|350|MARKNCLVKN

>sp|RIFK_THEPD|RIBOFLAVIN kinase|Thermofilum pendens (strain DSM 2475

Query: 1 MARKNCLV 8
MA++ CLV
Sbjct: 14 MAKRGCLV 21


>sp|PURA_METTH|ADENYLOSUCCINATE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 MARKNCLV 8
MAR++C++
Sbjct: 267 MARESCMI 274


>sp|IDI2_PYRAB|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus abyssi (strain GE5 /

Query: 4 KNCLVKN 10
K+CL KN
Sbjct: 14 KHCLTKN 20




70|Sequence|346|355|CLVKNLEAVE

>sp|IDI2_PYRAB|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus abyssi (strain GE5 /

Query: 1 CLVKNLEA 8
CL KN+EA
Sbjct: 16 CLTKNVEA 23


>sp|MPTA_AERPE|GTP cyclohydrolase MptA|Aeropyrum pernix (strain ATCC 700893

Query: 2 LVKNLEAVE 10
L +N+EAVE
Sbjct: 56 LSRNIEAVE 64


>sp|IF6_METAR|TRANSLATION initiation factor 6|Methanocella arvoryzae (strain DSM 22066

Query: 4 KNLEAVE 10
KN+EA+E
Sbjct: 118 KNIEAIE 124




71|Sequence|351|360|LEAVETLGST

>sp|Y800_METJA|UNCHARACTERIZED protein MJ0800|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEAVETLGST 10
L+ VET+G+T
Sbjct: 200 LDQVETIGTT 209


>sp|SYH_NANEQ|HISTIDINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LEAVETLG 8
+EA ETLG
Sbjct: 143 IEAYETLG 150


>sp|PFDA_HALMA|PREFOLDIN subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 LEAVETLGS 9
+EA+ETL S
Sbjct: 49 IEAIETLDS 57


>sp|PFDA_HALLT|PREFOLDIN subunit alpha|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LEAVETLGS 9
+EA+ETL S
Sbjct: 44 IEAIETLDS 52


>sp|SRP54_METJA|SIGNAL recognition particle 54 kDa|Methanocaldococcus jannaschii (strain

Query: 1 LEAVETLGS 9
LEA+E +GS
Sbjct: 335 LEAIENMGS 343


>sp|AROA_HALWD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LEAVETL 7
LEA+ETL
Sbjct: 125 LEAIETL 131




72|Sequence|356|365|TLGSTSTICS

>sp|NADA_HALMA|QUINOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 GSTSTIC 9
GSTSTIC
Sbjct: 277 GSTSTIC 283


>sp|THI4_METTH|THIAMINE thiazole synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 TLGSTSTICS 10
++ +TST+CS
Sbjct: 103 SVEATSTLCS 112




73|Sequence|361|370|STICSDKTGT

>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 3 ICSDKTGT 10
+CSDKTGT
Sbjct: 308 LCSDKTGT 315


>sp|RL14_METMJ|LARGE ribosomal subunit protein uL14|Methanoculleus marisnigri (strain

Query: 3 ICSDKTG 9
+CSD TG
Sbjct: 19 VCSDNTG 25


>sp|RL14_METJA|LARGE ribosomal subunit protein uL14|Methanocaldococcus jannaschii

Query: 3 ICSDKTG 9
IC+D TG
Sbjct: 19 ICADNTG 25


>sp|RL14_META3|LARGE ribosomal subunit protein uL14|Methanococcus aeolicus (strain

Query: 3 ICSDKTG 9
IC+D TG
Sbjct: 19 ICADNTG 25


>sp|MSRA_SULAC|PEPTIDE methionine sulfoxide reductase MsrA|Sulfolobus acidocaldarius

Query: 3 ICSDKTG 9
+C+D+TG
Sbjct: 44 VCTDETG 50


>sp|RL14_THEVO|LARGE ribosomal subunit protein uL14|Thermoplasma volcanium (strain

Query: 3 ICSDKTG 9
+C+D TG
Sbjct: 19 VCADNTG 25


>sp|RL14_METMP|LARGE ribosomal subunit protein uL14|Methanococcus maripaludis (strain

Query: 3 ICSDKTG 9
+C+D TG
Sbjct: 19 VCADNTG 25


>sp|RL14_METKA|LARGE ribosomal subunit protein uL14|Methanopyrus kandleri (strain AV19

Query: 3 ICSDKTG 9
+C+D TG
Sbjct: 20 VCADNTG 26


>sp|RL14_ARCFU|LARGE ribosomal subunit protein uL14|Archaeoglobus fulgidus (strain

Query: 3 ICSDKTG 9
+C+D TG
Sbjct: 19 VCADNTG 25


>sp|RL14_METM5|LARGE ribosomal subunit protein uL14|Methanococcus maripaludis (strain

Query: 3 ICSDKTG 9
+C+D TG
Sbjct: 19 VCADNTG 25


>sp|RL14_METLZ|LARGE ribosomal subunit protein uL14|Methanocorpusculum labreanum

Query: 3 ICSDKTG 9
+C+D TG
Sbjct: 19 VCADNTG 25


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 1 STICSDKTG 9
S +C KTG
Sbjct: 409 SMVCQGKTG 417


>sp|RL14_METM7|LARGE ribosomal subunit protein uL14|Methanococcus maripaludis (strain

Query: 3 ICSDKTG 9
+C+D TG
Sbjct: 19 VCADNTG 25


>sp|RL14_METM6|LARGE ribosomal subunit protein uL14|Methanococcus maripaludis (strain

Query: 3 ICSDKTG 9
+C+D TG
Sbjct: 19 VCADNTG 25




74|Sequence|366|375|DKTGTLTQNR

>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 DKTGTLTQNR 10
DKTGTLT+N+
Sbjct: 311 DKTGTLTKNQ 320


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DKTGTLTQNR 10
DKTGTLT+ R
Sbjct: 389 DKTGTLTEGR 398


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 1 DKTGTLTQNR 10
DKTGTLT+ +
Sbjct: 424 DKTGTLTKGK 433


>sp|MTRB_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanosarcina barkeri (strain

Query: 2 KTGTLTQNR 10
+TGT+TQ R
Sbjct: 17 ETGTITQER 25


>sp|KDPB_THEAC|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 DKTGTLT 7
DKTGT+T
Sbjct: 295 DKTGTIT 301


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 1 DKTGTLT 7
DKTGT+T
Sbjct: 298 DKTGTIT 304


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DKTGTLTQ 8
DKTG LT+
Sbjct: 251 DKTGCLTE 258


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 DKTGTLT 7
DKTGT+T
Sbjct: 318 DKTGTIT 324


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 DKTGTLT 7
DKTGT+T
Sbjct: 318 DKTGTIT 324




75|Sequence|371|380|LTQNRMTVAH

>sp|CRUF_HALJT|BISANHYDROBACTERIORUBERIN hydratase|Haloarcula japonica (strain ATCC 49778

Query: 1 LTQNRMTVA 9
+T+NR T+A
Sbjct: 29 VTENRFTIA 37




76|Sequence|376|385|MTVAHMWFDN

>sp|HTPX_METKA|PROTEASE HtpX homolog|Methanopyrus kandleri (strain AV19 /

Query: 1 MTVAHMWFDN 10
++ AH+W +N
Sbjct: 276 VSTAHLWIEN 285


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VAHMWFDN 10
+AH WF N
Sbjct: 273 LAHQWFGN 280


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VAHMWFDN 10
+AH WF N
Sbjct: 275 LAHQWFGN 282


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus

Query: 2 TVAHMWFDN 10
T+ HM FD+
Sbjct: 4 TIVHMGFDD 12


>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 HMWFDN 10
H+WF N
Sbjct: 194 HLWFGN 199


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 HMWFDN 10
H+WF N
Sbjct: 192 HLWFGN 197


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 5 HMWFDN 10
H+WF N
Sbjct: 194 HLWFGN 199


>sp|GLYA_NITMS|SERINE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 5 HMWFDN 10
H WF+N
Sbjct: 21 HKWFEN 26


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 5 HMWFDN 10
H WFD+
Sbjct: 86 HTWFDS 91


>sp|K6PF_PYRFU|ADP-SPECIFIC phosphofructokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 HMWFD 9
H WFD
Sbjct: 82 HQWFD 86


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 3 VAHMWF 8
+AH WF
Sbjct: 273 IAHQWF 278


>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain ATCC

Query: 3 VAHMWF 8
+AH WF
Sbjct: 268 IAHQWF 273


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 3 VAHMWF 8
+AH WF
Sbjct: 273 IAHQWF 278


>sp|GLYA_KORCO|SERINE hydroxymethyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 5 HMWFDN 10
H WFD+
Sbjct: 18 HKWFDS 23


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 3 VAHMWF 8
+AH WF
Sbjct: 267 IAHQWF 272


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VAHMWFDN 10
VA +WFD+
Sbjct: 519 VADVWFDS 526


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VAHMWFDN 10
VA +WFD+
Sbjct: 519 VADVWFDS 526


>sp|ILVC_PYRFU|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VAHMWFDN 10
V +W+DN
Sbjct: 4 VVKVWYDN 11


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 VAHMWFDN 10
VA +WFD+
Sbjct: 522 VADVWFDS 529


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 VAHMWFDN 10
VA +WFD+
Sbjct: 522 VADVWFDS 529


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VAHMWFDN 10
VA +WFD+
Sbjct: 459 VADVWFDS 466


>sp|METK_METJA|S-ADENOSYLMETHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VAHMWFDN 10
+A+ W DN
Sbjct: 383 IANKWLDN 390


>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VAHMWF 8
+AH WF
Sbjct: 272 LAHQWF 277


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VAHMWF 8
+AH WF
Sbjct: 274 LAHQWF 279


>sp|METXA_NATPD|HOMOSERINE O-acetyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 AHMWFDN 10
AH W+D+
Sbjct: 64 AHAWWDD 70




77|Sequence|381|390|MWFDNQIHEA

>sp|SURE_PICTO|5'-NUCLEOTIDASE SurE|Picrophilus torridus (strain ATCC 700027

Query: 2 WFDNQIHE 9
WF N+ HE
Sbjct: 200 WFGNKRHE 207


>sp|RL31_PICTO|LARGE ribosomal subunit protein eL31|Picrophilus torridus (strain ATCC

Query: 1 MWFDNQIHE 9
+W DN+++E
Sbjct: 50 IWVDNKVNE 58


>sp|ILVC_PYRFU|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MWFDNQI 7
+W+DN++
Sbjct: 7 VWYDNEV 13


>sp|PTH_METS5|PEPTIDYL-TRNA hydrolase|Metallosphaera sedula (strain ATCC 51363

Query: 2 WFDNQIHEA 10
W D+ +HE
Sbjct: 42 WLDSWLHEG 50


>sp|PTH_PYRAB|PEPTIDYL-TRNA hydrolase|Pyrococcus abyssi (strain GE5 /

Query: 2 WFDNQIHEA 10
WF+ HE
Sbjct: 43 WFEKWFHEG 51


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MWFDNQI 7
+WF N+I
Sbjct: 193 LWFGNEI 199


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 MWFDNQI 7
+WF N+I
Sbjct: 195 LWFGNEI 201


>sp|Y436_PYRFU|KELCH domain-containing protein PF0436|Pyrococcus furiosus (strain ATCC

Query: 1 MWFDNQI 7
+W DN++
Sbjct: 107 LWIDNEV 113




78|Sequence|386|395|QIHEADTTED

>sp|PYLD_METAC|PYRROLYSINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QIHEADTT 8
Q+HEAD+T
Sbjct: 15 QLHEADST 22


>sp|KAD6_METTH|PUTATIVE adenylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 1 QIHEADTT 8
++HE DTT
Sbjct: 130 RVHEVDTT 137


>sp|RS24_META3|SMALL ribosomal subunit protein eS24|Methanococcus aeolicus (strain

Query: 1 QIHEADTTED 10
+I EA+TTE+
Sbjct: 90 KIEEAETTEE 99




79|Sequence|391|400|DTTEDQSGTS

***** No hits found ******


80|Sequence|396|405|QSGTSFDKSS

>sp|Y1008_CALMQ|UPF0179 protein Cmaq_1008|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 SGTSFDKS 9
S TSFDKS
Sbjct: 92 SITSFDKS 99




81|Sequence|401|410|FDKSSHTWVA

>sp|Y1414_METJA|UNCHARACTERIZED protein MJ1414|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DKSSHTW 8
D S+HTW
Sbjct: 119 DLSNHTW 125


>sp|FLAK_METJA|PREFLAGELLIN peptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FDKSSHTWV 9
FDK+ WV
Sbjct: 192 FDKNEEIWV 200


>sp|ILVC3_SACS2|PUTATIVE ketol-acid reductoisomerase 3|Saccharolobus solfataricus (strain

Query: 4 SSHTWV 9
S HTWV
Sbjct: 194 SEHTWV 199


>sp|ILVC2_SACS2|PUTATIVE ketol-acid reductoisomerase 2|Saccharolobus solfataricus (strain

Query: 4 SSHTWV 9
S HTWV
Sbjct: 194 SEHTWV 199


>sp|RIFK_METM7|RIBOFLAVIN kinase|Methanococcus maripaludis (strain C7 /

Query: 1 FDKSSHT 7
FDKS H+
Sbjct: 79 FDKSGHS 85


>sp|RS4_METST|SMALL ribosomal subunit protein uS4|Methanosphaera stadtmanae (strain

Query: 1 FDKSSHTWVA 10
+D SH W A
Sbjct: 11 YDTPSHPWNA 20


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FDKSSHT 7
FDK+ HT
Sbjct: 72 FDKNGHT 78


>sp|Y834_METJA|UNCHARACTERIZED protein MJ0834|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DKSSHTWVA 10
+ SH WVA
Sbjct: 140 NSGSHMWVA 148


>sp|TFE_STAMF|TRANSCRIPTION factor E|Staphylothermus marinus (strain ATCC 43588

Query: 2 DKSSHTWV 9
DK+ H W+
Sbjct: 58 DKTLHLWI 65


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 1 FDKSSHTWVA 10
+D++ H W A
Sbjct: 216 YDRTLHYWAA 225


>sp|LYSY_SACS2|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 SSHTWV 9
S+HTW+
Sbjct: 248 SAHTWL 253


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 FDKSSHTWVA 10
F+K HT VA
Sbjct: 75 FEKRGHTRVA 84


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 SHTWV 9
SHTW+
Sbjct: 56 SHTWI 60


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 SHTWV 9
SHTW+
Sbjct: 56 SHTWI 60


>sp|MPCT_HALS3|TRANSDUCER protein MpcT|Halobacterium salinarum (strain ATCC 29341

Query: 2 DKSSHTW 8
D+SS TW
Sbjct: 617 DRSSFTW 623


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 5 SHTWV 9
SHTW+
Sbjct: 56 SHTWI 60




82|Sequence|406|415|HTWVALSHIA

>sp|RL2_IGNH4|LARGE ribosomal subunit protein uL2|Ignicoccus hospitalis (strain

Query: 3 WVALSHI 9
WV L+HI
Sbjct: 56 WVPLAHI 62


>sp|RL2_HYPBU|LARGE ribosomal subunit protein uL2|Hyperthermus butylicus (strain DSM

Query: 3 WVALSHI 9
WV L+HI
Sbjct: 52 WVPLAHI 58


>sp|RL15E_PYRFU|LARGE ribosomal subunit protein eL15|Pyrococcus furiosus (strain ATCC

Query: 3 WVALSH 8
W+AL H
Sbjct: 148 WIALKH 153


>sp|RL15E_PYRHO|LARGE ribosomal subunit protein eL15|Pyrococcus horikoshii (strain ATCC

Query: 3 WVALSH 8
W+AL H
Sbjct: 148 WIALKH 153


>sp|RL15E_PYRAB|LARGE ribosomal subunit protein eL15|Pyrococcus abyssi (strain GE5 /

Query: 3 WVALSH 8
W+AL H
Sbjct: 148 WIALKH 153




83|Sequence|411|420|LSHIAGLCNR

>sp|GLYA_METHJ|SERINE hydroxymethyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 LSHIAGLC 8
++HIAGLC
Sbjct: 198 IAHIAGLC 205


>sp|GLYA_METPE|SERINE hydroxymethyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 LSHIAGLC 8
++HIAGLC
Sbjct: 199 IAHIAGLC 206


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 SHIAGLCNR 10
SHI+G C++
Sbjct: 588 SHISGTCHK 596


>sp|PURQ_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LSHIAGLCN 9
+ +IAG+CN
Sbjct: 183 IDNIAGVCN 191


>sp|RRP4_KORCO|EXOSOME complex component Rrp4|Korarchaeum cryptofilum (strain OPF8)

Query: 2 SHIAGLCNR 10
SH++GL +R
Sbjct: 209 SHVSGLSDR 217


>sp|PURQ_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HIAGLCN 9
+IAG+CN
Sbjct: 221 NIAGICN 227


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 4 IAGLCN 9
I+GLCN
Sbjct: 50 ISGLCN 55


>sp|END3_METJA|ENDONUCLEASE III|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SHIAGLCNR 10
+H+ +CNR
Sbjct: 136 THVHRICNR 144


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 1 LSHIAGLCN 9
+ H++ LCN
Sbjct: 377 IEHLSDLCN 385


>sp|Y120_METJA|UNCHARACTERIZED protein MJ0120|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSHIAGLCNR 10
L AGLC+R
Sbjct: 88 LIETAGLCHR 97


>sp|PROA_METMA|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LSHIAGLCN 9
L H +G+C+
Sbjct: 224 LGHTSGICH 232


>sp|PROA_METBF|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LSHIAGLCN 9
L H +G+C+
Sbjct: 224 LGHTSGICH 232


>sp|PROA_METAC|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LSHIAGLCN 9
L H +G+C+
Sbjct: 224 LGHTSGICH 232




84|Sequence|416|425|GLCNRAVFKG

>sp|IF2B_METLZ|TRANSLATION initiation factor 2 subunit|Methanocorpusculum labreanum (strain

Query: 4 NRAVFKG 10
NRAVF G
Sbjct: 76 NRAVFNG 82


>sp|IF2B_METB6|TRANSLATION initiation factor 2 subunit|Methanoregula boonei (strain DSM

Query: 4 NRAVFKG 10
NRA+F G
Sbjct: 76 NRAIFNG 82


>sp|RL30_THEVO|LARGE ribosomal subunit protein uL30|Thermoplasma volcanium (strain

Query: 2 LCNRAVFKG 10
L NR +FKG
Sbjct: 66 LKNRCLFKG 74




85|Sequence|421|430|AVFKGGQDNI

>sp|G3P_HALMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AVFKGGQD 8
A+F+GG+D
Sbjct: 103 AIFQGGED 110


>sp|G3P_METMJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 AVFKGGQDN 9
A+F+GG+D+
Sbjct: 105 AIFQGGEDH 113


>sp|G3P_METST|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 AVFKGGQDN 9
A+F+GG+D+
Sbjct: 106 AIFEGGEDH 114


>sp|G3P_METKA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 AVFKGGQD 8
A+F+GG++
Sbjct: 113 AIFQGGEE 120


>sp|GGGPS_METMJ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 AVFKGGQDNI 10
A+F GG D++
Sbjct: 73 AIFDGGIDHL 82


>sp|TRM56_SULTO|TRNA (cytidine(56)-2'-O)-methyltransferase|Sulfurisphaera tokodaii

Query: 2 VFKGGQDNI 10
++KGG+ NI
Sbjct: 139 IYKGGELNI 147


>sp|CPGS_THEGJ|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus gammatolerans

Query: 1 AVFKGGQDNI 10
AVF GG + I
Sbjct: 28 AVFLGGSEKI 37


>sp|G3P_THEAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 AVFKGGQD 8
A+F+GG++
Sbjct: 104 AIFEGGEE 111


>sp|GLYA_HALLT|SERINE hydroxymethyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 1 AVFKGGQ 7
AVF GGQ
Sbjct: 251 AVFPGGQ 257


>sp|G3P_PYRAE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VFKGGQD 8
+F+GG+D
Sbjct: 106 IFQGGED 112




86|Sequence|426|435|GQDNIPVLKR

>sp|RPO3_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Archaeoglobus fulgidus (strain ATCC

Query: 3 DNIPVLK 9
DNIPVL+
Sbjct: 123 DNIPVLE 129


>sp|MTAD_HALWD|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 QDNIPV 7
QDNIP+
Sbjct: 215 QDNIPI 220


>sp|PHP_SACS2|ARYLDIALKYLPHOSPHATASE solfataricus (strain ATCC 35092

Query: 2 QDNIPVLKR 10
+D IP LKR
Sbjct: 285 EDTIPFLKR 293


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 291 GKDNIP 296


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 295 GKDNIP 300


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 298 GKDNIP 303


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 295 GKDNIP 300


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 293 GKDNIP 298


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 293 GKDNIP 298


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 294 GKDNIP 299


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 297 GKDNIP 302


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 296 GKDNIP 301


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 293 GKDNIP 298


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 297 GKDNIP 302


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 296 GKDNIP 301


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 291 GKDNIP 296


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 293 GKDNIP 298


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 293 GKDNIP 298


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 291 GKDNIP 296


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 296 GKDNIP 301


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 289 GKDNIP 294


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 293 GKDNIP 298


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 306 GKDNIP 311


>sp|RL1_THEVO|LARGE ribosomal subunit protein uL1|Thermoplasma volcanium (strain ATCC

Query: 1 GQDNIPVLK 9
GQD +P++K
Sbjct: 136 GQDPVPLIK 144


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 292 GKDNIP 297


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 294 GKDNIP 299


>sp|CPGS_METTH|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermobacter

Query: 3 DNIPVLK 9
DNIPV++
Sbjct: 430 DNIPVVR 436


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GQDNIP 6
G+DNIP
Sbjct: 324 GKDNIP 329


>sp|THIE_METBF|THIAMINE-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GQDNIPV 7
GQD++PV
Sbjct: 95 GQDDMPV 101


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 1 GQDNIPVLK 9
G DN+ VLK
Sbjct: 273 GVDNVKVLK 281




87|Sequence|431|440|PVLKRDVAGD

>sp|CHED2_METAC|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina acetivorans

Query: 1 PVLKRDVAGD 10
P+L +DV G+
Sbjct: 185 PILAKDVGGE 194


>sp|CSD_HALSA|PROBABLE cysteine desulfurase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PVLKRDVAG 9
P+L+R+VAG
Sbjct: 19 PILEREVAG 27


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 1 PVLKRDVAGD 10
P+L+R V GD
Sbjct: 19 PILERKVGGD 28


>sp|CHED1_METMA|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina mazei (strain

Query: 1 PVLKRDVAGD 10
P+L +DV G+
Sbjct: 185 PILAKDVGGE 194


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 1 PVLKRDVAGD 10
P KRD+ GD
Sbjct: 437 PQWKRDLIGD 446


>sp|IF2P_THEPD|PROBABLE translation initiation factor IF-2|Thermofilum pendens (strain DSM

Query: 1 PVLKRDV 7
PV+KRDV
Sbjct: 393 PVVKRDV 399




88|Sequence|436|445|DVAGDASESA

>sp|CH60_METVS|CHAPERONIN GroEL|Methanococcus vannielii (strain ATCC 35089

Query: 1 DVAGDASESA 10
DVAGD + +A
Sbjct: 82 DVAGDGTTTA 91


>sp|RS7_HALWD|SMALL ribosomal subunit protein uS7|Haloquadratum walsbyi (strain DSM

Query: 1 DVAGDASESA 10
DVA D SESA
Sbjct: 23 DVAVDESESA 32




89|Sequence|441|450|ASESALLKCI

***** No hits found ******


90|Sequence|446|455|LLKCIELSSG

>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KCIELSS 9
KC+E+SS
Sbjct: 1299 KCVEISS 1305


>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 3 KCIELSS 9
KC++LSS
Sbjct: 620 KCLDLSS 626




91|Sequence|451|460|ELSSGSVKLM

>sp|Y3525_METJA|UNCHARACTERIZED protein MJECL25|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELSSGSVK 8
E+SSG+VK
Sbjct: 14 EISSGTVK 21


>sp|Y1629_ARCFU|UNCHARACTERIZED protein AF_1629|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELSSGSVK 8
+LS+GSVK
Sbjct: 182 QLSAGSVK 189




92|Sequence|456|465|SVKLMRERNK

>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 VKLMRER 8
VKLMRE+
Sbjct: 197 VKLMREK 203


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VKLMRER 8
VKLM+ER
Sbjct: 1519 VKLMKER 1525




93|Sequence|461|470|RERNKKVAEI

>sp|Y521_ARCFU|UNCHARACTERIZED N-acetyltransferase AF_0521|Archaeoglobus fulgidus (strain ATCC

Query: 2 ERNKKVAEI 10
ERN+KVAE+
Sbjct: 110 ERNRKVAEL 118


>sp|APGM_THEKO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus kodakarensis (strain ATCC

Query: 2 ERNKKVAEI 10
E +KKVAEI
Sbjct: 182 EESKKVAEI 190


>sp|RS17E_METKA|SMALL ribosomal subunit protein eS17|Methanopyrus kandleri (strain AV19

Query: 2 ERNKKVAEI 10
E NKKV EI
Sbjct: 29 EHNKKVVEI 37


>sp|WTPC_METJA|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Methanocaldococcus jannaschii

Query: 1 RERNKKVAE 9
+ +NKKVAE
Sbjct: 216 KPKNKKVAE 224


>sp|PURP_ARCFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Archaeoglobus fulgidus (strain ATCC

Query: 1 RERNKKVAE 9
RER KKV E
Sbjct: 49 REREKKVYE 57


>sp|APGM_PYRHO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ERNKKVAEI 10
E +KKVAEI
Sbjct: 183 EDSKKVAEI 191


>sp|APGM_PYRAB|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus abyssi (strain GE5 /

Query: 2 ERNKKVAEI 10
E +KKVAEI
Sbjct: 181 EESKKVAEI 189


>sp|DLHH_SACS2|PUTATIVE carboxymethylenebutenolidase|Saccharolobus solfataricus (strain

Query: 2 ERNKKVAEI 10
E+ KKVAE+
Sbjct: 103 EKGKKVAEL 111


>sp|VORB_PYRAB|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus abyssi (strain GE5 /

Query: 2 ERNKKVAEI 10
ER KK+AE+
Sbjct: 301 ERLKKLAEV 309


>sp|TRM56_PYRFU|TRNA (cytidine(56)-2'-O)-methyltransferase|Pyrococcus furiosus (strain

Query: 1 RERNKKVAEI 10
+ER KKV E+
Sbjct: 165 QERGKKVVEV 174


>sp|VORB_PYRHO|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus horikoshii (strain ATCC

Query: 2 ERNKKVAEI 10
ER KK+AE+
Sbjct: 301 ERLKKLAEV 309


>sp|VORB_PYRFU|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ERNKKVAEI 10
ER KK+AE+
Sbjct: 301 ERLKKLAEV 309




94|Sequence|466|475|KVAEIPFNST

>sp|Y049_PYRAE|UNCHARACTERIZED serpin-like protein PAE0049|Pyrobaculum aerophilum (strain ATCC

Query: 2 VAEIPFNST 10
V E+PFN+T
Sbjct: 212 VVELPFNNT 220


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 KVAEIPFN 8
+VAEIPF+
Sbjct: 374 EVAEIPFD 381


>sp|GCSPA_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 1 KVAEIPFN 8
+VAEIPF+
Sbjct: 373 EVAEIPFD 380


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 KVAEIPFN 8
+VAEIPF+
Sbjct: 374 EVAEIPFD 381


>sp|PYRF_ARCFU|OROTIDINE 5'-phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC

Query: 1 KVAEIPFNST 10
K+A++P+ S+
Sbjct: 59 KIADVPYTSS 68


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 1 KVAEIPFNS 9
++A IP+NS
Sbjct: 269 ELASIPYNS 277


>sp|GCSPA_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 KVAEIPF 7
+VAEIPF
Sbjct: 373 EVAEIPF 379


>sp|GCSPA_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 KVAEIPF 7
+VAEIPF
Sbjct: 371 EVAEIPF 377


>sp|PYRF_THEVO|OROTIDINE 5'-phosphate decarboxylase|Thermoplasma volcanium (strain ATCC

Query: 1 KVAEIPFNST 10
KVA+IP+ ++
Sbjct: 60 KVADIPYTNS 69


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KVAEIPFNST 10
++ EIP N+T
Sbjct: 158 EIKEIPMNAT 167


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVAEIPFN 8
K+AEIP N
Sbjct: 341 KIAEIPGN 348


>sp|IPYR_AERPE|INORGANIC pyrophosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VAEIPFNST 10
V EIP NS+
Sbjct: 20 VIEIPMNSS 28


>sp|MRE11_METMA|DNA double-strand break repair protein|Methanosarcina mazei (strain

Query: 1 KVAEIPF 7
KVA IPF
Sbjct: 76 KVANIPF 82




95|Sequence|471|480|PFNSTNKYQL

>sp|Y1162_METJA|UNCHARACTERIZED protein MJ1162|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PFNSTNKY 8
PFN+ N+Y
Sbjct: 104 PFNTPNEY 111


>sp|Y1865_METTH|UPF0288 protein MTH_1865|Methanothermobacter thermautotrophicus (strain

Query: 1 PFNSTN 6
PFN TN
Sbjct: 488 PFNGTN 493


>sp|DPCKG_METS3|GTP-DEPENDENT dephospho-CoA kinase|Methanobrevibacter smithii (strain ATCC

Query: 2 FNSTNKYQL 10
FN+ KY+L
Sbjct: 48 FNNLTKYEL 56




96|Sequence|476|485|NKYQLSIHET

>sp|FTR_METMA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KYQLSIHE 9
KYQ +HE
Sbjct: 288 KYQFKLHE 295


>sp|FTR_METBF|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KYQLSIHE 9
KYQ +HE
Sbjct: 288 KYQFKLHE 295


>sp|FTR_METAC|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KYQLSIHE 9
KYQ +HE
Sbjct: 288 KYQFKLHE 295


>sp|RS10_KORCO|SMALL ribosomal subunit protein uS10|Korarchaeum cryptofilum (strain

Query: 1 NKYQLSIHE 9
+KY+L IH+
Sbjct: 63 DKYELRIHK 71


>sp|GCH3_SACI6|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NKYQLSIHE 9
NK+ + IHE
Sbjct: 31 NKFMMKIHE 39


>sp|GCH3_SACI4|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NKYQLSIHE 9
NK+ + IHE
Sbjct: 31 NKFMMKIHE 39


>sp|GCH3_SACI3|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.27)

Query: 1 NKYQLSIHE 9
NK+ + IHE
Sbjct: 31 NKFMMKIHE 39


>sp|GCH3_SACI2|GTP cyclohydrolase III|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 NKYQLSIHE 9
NK+ + IHE
Sbjct: 31 NKFMMKIHE 39


>sp|GCH3_SACI1|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 NKYQLSIHE 9
NK+ + IHE
Sbjct: 31 NKFMMKIHE 39


>sp|GCH3_SACS2|GTP cyclohydrolase III|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NKYQLSIHE 9
NK+ + IHE
Sbjct: 31 NKFMMKIHE 39


>sp|GCH3_SACI7|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 NKYQLSIHE 9
NK+ + IHE
Sbjct: 31 NKFMMKIHE 39




97|Sequence|481|490|SIHETEDPND

>sp|ALF1_PYRAB|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus abyssi (strain GE5 /

Query: 2 IHETEDPND 10
IH EDP +
Sbjct: 265 IHRNEDPEE 273


>sp|ALF1_PYRFU|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IHETEDPND 10
IH EDP +
Sbjct: 265 IHRNEDPEE 273


>sp|ALF1_THEKO|FRUCTOSE-BISPHOSPHATE aldolase class 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IHETEDPND 10
IH EDP +
Sbjct: 265 IHRNEDPEE 273


>sp|ALF1_PYRHO|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IHETEDPND 10
IH EDP +
Sbjct: 265 IHRNEDPEE 273


>sp|PUR7_METBU|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SIHETEDPND 10
+I++TE+PN+
Sbjct: 13 TIYKTENPNE 22


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IHETEDP 8
IH+ EDP
Sbjct: 582 IHKVEDP 588


>sp|PYRF_SULTO|OROTIDINE 5'-phosphate decarboxylase|Sulfurisphaera tokodaii (strain DSM

Query: 1 SIHETEDP 8
SI+E++DP
Sbjct: 183 SIYESKDP 190


>sp|KTHY_METTH|PROBABLE thymidylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 2 IHETEDPND 10
+HE +P D
Sbjct: 31 VHEVREPTD 39


>sp|RNABP_PYRAB|RNA-BINDING protein PAB1135|Pyrococcus abyssi (strain GE5 /

Query: 2 IHETEDP 8
IH TEDP
Sbjct: 16 IHATEDP 22


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SIHETEDP 8
SIH TE+P
Sbjct: 590 SIHLTENP 597




98|Sequence|486|495|EDPNDNRYLL

>sp|Y1359_METJA|UPF0273 protein MJ1359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DPNDNRYLL 10
DPND R L+
Sbjct: 109 DPNDERELI 117


>sp|RS7_HALSA|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain

Query: 1 EDPNDNRYL 9
EDP+ RYL
Sbjct: 42 EDPSTRRYL 50


>sp|RS7_HALS3|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain

Query: 1 EDPNDNRYL 9
EDP+ RYL
Sbjct: 42 EDPSTRRYL 50


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 2 DPNDNRYLL 10
DP NRY+
Sbjct: 212 DPTGNRYVF 220


>sp|G3P_PICTO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 2 DPNDNR 7
DPNDNR
Sbjct: 170 DPNDNR 175


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC 700893

Query: 2 DPNDNRYLL 10
DPN RY L
Sbjct: 94 DPNRGRYSL 102


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PNDNRYLL 10
PNDN Y L
Sbjct: 10 PNDNPYAL 17


>sp|ADHS1_ARCFU|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DPNDNR 7
DPND R
Sbjct: 86 DPNDKR 91


>sp|RS7_HALWD|SMALL ribosomal subunit protein uS7|Haloquadratum walsbyi (strain DSM

Query: 1 EDPNDNRYL 9
EDP+ RY+
Sbjct: 59 EDPSTQRYI 67


>sp|Y2580_AERPE|UNCHARACTERIZED protein APE_2580|Aeropyrum pernix (strain ATCC 700893

Query: 2 DPNDNRYLL 10
DP+D YL+
Sbjct: 237 DPSDAEYLV 245


>sp|TRMI_PYRAB|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 2 DPNDNRYLL 10
DP RYL+
Sbjct: 12 DPRGKRYLI 20


>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 EDPNDN 6
E PNDN
Sbjct: 535 ESPNDN 540


>sp|DNLJ_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EDPNDNRYL 9
E+P DN Y+
Sbjct: 2 EEPEDNPYI 10


>sp|Y942_SACS2|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 EDPNDNRYLL 10
+D ++NRYL+
Sbjct: 232 KDSDNNRYLV 241


>sp|Y3508_METJA|PROBABLE helicase MJECL08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DPNDNRYLL 10
+P D +Y+L
Sbjct: 457 EPTDQKYIL 465


>sp|Y1472_METJA|UNCHARACTERIZED protein MJ1472|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PNDNRYL 9
PN N+YL
Sbjct: 396 PNSNKYL 402


>sp|GLFT_THEAC|GLUTAMATE formimidoyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 2 DPNDNRYLL 10
DPN NR ++
Sbjct: 40 DPNHNRSVI 48




99|Sequence|491|500|NRYLLVMKGA

>sp|NTPTH_METKA|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanopyrus kandleri (strain AV19 /

Query: 1 NRYLLVMKGA 10
+RYLL +GA
Sbjct: 59 DRYLLAREGA 68


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19 /

Query: 1 NRYLLVMKGA 10
NR+++ ++GA
Sbjct: 136 NRFVITVRGA 145


>sp|RNP3_METTH|RIBONUCLEASE P protein component 3|Methanothermobacter thermautotrophicus

Query: 1 NRYLLVMKG 9
NR+LL+ +G
Sbjct: 230 NRHLLIAEG 238




100|Sequence|496|505|VMKGAPERIL

>sp|PYRH_META3|URIDYLATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VMKGAPERIL 10
V++GAPE IL
Sbjct: 202 VIEGAPEEIL 211


>sp|PYRH_METM7|URIDYLATE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 VMKGAPERIL 10
V+KG PE IL
Sbjct: 202 VIKGIPEEIL 211


>sp|PYRH_METMP|URIDYLATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VMKGAPERIL 10
V+KG PE IL
Sbjct: 202 VVKGIPEEIL 211


>sp|PYRH_METM6|URIDYLATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 VMKGAPERIL 10
V+KG PE IL
Sbjct: 202 VVKGIPEEIL 211


>sp|PYRH_METM5|URIDYLATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 VMKGAPERIL 10
V+KG PE IL
Sbjct: 202 VVKGIPEEIL 211


>sp|PYRH_METJA|URIDYLATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VMKGAPERIL 10
V+KG PE +L
Sbjct: 203 VVKGTPEELL 212


>sp|DPHB_THEKO|DIPHTHINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GAPERIL 10
GAPE+IL
Sbjct: 255 GAPEKIL 261


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 VMKGAPERIL 10
+MKG P +L
Sbjct: 59 IMKGQPNMVL 68


>sp|HCGE_METTM|GUANYLYLPYRIDINOL adenylase HcgE|Methanothermobacter marburgensis (strain ATCC

Query: 1 VMKGAPERI 9
+ +G PERI
Sbjct: 35 IHRGGPERI 43


>sp|Y830_PYRAE|PROTEIN PAE0830|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 MKGAPERI 9
M GAPER+
Sbjct: 154 MVGAPERM 161


>sp|Y373_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5 /

Query: 1 VMKGAPERIL 10
VM+G PE +
Sbjct: 223 VMEGKPEEVF 232


>sp|COBQ_METMA|PROBABLE cobyric acid synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VMKGAPERI 9
V+KGA ER+
Sbjct: 114 VLKGALERL 122


>sp|ACYP_THEKO|ACYLPHOSPHATASE kodakarensis (strain ATCC BAA-918

Query: 1 VMKGAPERI 9
V++G PER+
Sbjct: 47 VIEGDPERV 55




101|Sequence|501|510|PERILDRCST

>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ERILDRCST 10
ER+LDR ST
Sbjct: 729 ERLLDRIST 737


>sp|TRPD_METMA|ANTHRANILATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC

Query: 1 PERILDRCST 10
P RI+D C T
Sbjct: 74 PFRIVDTCGT 83


>sp|TRPD_METAC|ANTHRANILATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 PERILDRCST 10
P R++D C T
Sbjct: 74 PFRVIDTCGT 83


>sp|SURE_METMJ|5'-NUCLEOTIDASE SurE|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PERILDRCS 9
P RI+DR S
Sbjct: 141 PSRIIDRYS 149


>sp|CHEB_NATPD|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Natronomonas

Query: 3 RILDRCST 10
RI+D C T
Sbjct: 71 RIMDECPT 78


>sp|SYS_HALMA|SERINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PERILDRCS 9
P R+LD C+
Sbjct: 327 PYRVLDMCT 335


>sp|SYP_THEPD|PROLINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 ERILDRC 8
ER+L++C
Sbjct: 305 ERVLEKC 311


>sp|RNH2_THEAC|RIBONUCLEASE HII|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ERILDRCST 10
E+I+ RCS
Sbjct: 55 EKIMGRCSV 63




102|Sequence|506|515|DRCSTILLQG

>sp|SECY_HALMA|PROTEIN translocase subunit SecY|Haloarcula marismortui (strain ATCC 43049

Query: 1 DRCSTILLQG 10
D T+LLQG
Sbjct: 235 DGLQTVLLQG 244




103|Sequence|511|520|ILLQGKEQPL

>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 LQGKEQP 9
L+GKEQP
Sbjct: 193 LEGKEQP 199


>sp|PDXT_METVS|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus vannielii

Query: 5 GKEQPL 10
GKEQPL
Sbjct: 87 GKEQPL 92


>sp|PDXT_METM5|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 5 GKEQPL 10
GKEQPL
Sbjct: 87 GKEQPL 92


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 1 ILLQGKEQPL 10
++ +GKE+PL
Sbjct: 780 VVWEGKERPL 789


>sp|PDXT_METMP|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 5 GKEQPL 10
GKEQPL
Sbjct: 87 GKEQPL 92


>sp|PDXT_METM7|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 5 GKEQPL 10
GKEQPL
Sbjct: 87 GKEQPL 92


>sp|PDXT_META3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus aeolicus (strain

Query: 5 GKEQPL 10
GKEQPL
Sbjct: 86 GKEQPL 91


>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LLQGKEQPL 10
+++GKE P+
Sbjct: 528 VIEGKEHPI 536


>sp|Y034_METJA|IRON-SULFUR cluster assembly SufBD family|Methanocaldococcus jannaschii

Query: 1 ILLQGKEQ 8
I+L+GKE+
Sbjct: 48 IILEGKEE 55




104|Sequence|516|525|KEQPLDEEMK

>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 QPLDEEMK 10
QPLDE+MK
Sbjct: 1115 QPLDEKMK 1122


>sp|ENO_META3|ENOLASE aeolicus (strain ATCC BAA-1280

Query: 2 EQPLDEE 8
E PLDEE
Sbjct: 286 EDPLDEE 292


>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 2 EQPLDEEMK 10
E P+DEE++
Sbjct: 622 EVPVDEEIR 630


>sp|SURE_METS3|5'-NUCLEOTIDASE SurE|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 EQPLDEEMK 10
E P+DEE +
Sbjct: 179 ENPVDEEFE 187


>sp|RAD50_SACS2|DNA double-strand break repair Rad50|Saccharolobus solfataricus (strain

Query: 3 QPLDEEMK 10
+PLDEE K
Sbjct: 431 RPLDEEHK 438




105|Sequence|521|530|DEEMKEAFQN

>sp|PANE_PYRAE|2-DEHYDROPANTOATE 2-reductase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EEMKEAFQN 10
EE+KEA+ N
Sbjct: 92 EEIKEAYPN 100


>sp|ACDB1_PYRFU|ACETATE--COA ligase [ADP-forming] I subunit|Pyrococcus furiosus (strain ATCC

Query: 1 DEEMKEAFQN 10
DEE +EAF+
Sbjct: 85 DEEAREAFRT 94


>sp|AATE_SULAC|A-TYPE ATP synthase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 1 DEEMKEAF 8
DEE+K+AF
Sbjct: 20 DEELKKAF 27


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 DEEMKEA 7
DEE KEA
Sbjct: 283 DEEFKEA 289


>sp|SYY_PYRIL|TYROSINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 EEMKEAFQN 10
EE++E FQ+
Sbjct: 22 EELRELFQS 30


>sp|RL14E_METKA|LARGE ribosomal subunit protein eL14|Methanopyrus kandleri (strain AV19

Query: 1 DEEMKEAFQ 9
DEE+KEA +
Sbjct: 70 DEEVKEALE 78


>sp|Y1535_METJA|UNCHARACTERIZED protein MJ1535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DEEMKEAFQ 9
+EEMKE F+
Sbjct: 163 EEEMKEIFE 171


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DEEMKEAFQN 10
D+E+ EA+ N
Sbjct: 30 DDEVYEAYMN 39


>sp|METE_SACI7|METHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DEEMKEAFQN 10
DE+++EAF +
Sbjct: 35 DEDLQEAFND 44


>sp|METE_SACI1|METHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 DEEMKEAFQN 10
DE+++EAF +
Sbjct: 35 DEDLQEAFSD 44


>sp|IDSA_METJA|SHORT chain isoprenyl diphosphate synthase|Methanocaldococcus jannaschii

Query: 1 DEEMKEAFQ 9
DEE+KEA +
Sbjct: 272 DEEIKEAIE 280


>sp|METE_SACI6|METHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DEEMKEAFQN 10
DE+++EAF +
Sbjct: 35 DEDLQEAFND 44


>sp|METE_SACI4|METHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DEEMKEAFQN 10
DE+++EAF +
Sbjct: 35 DEDLQEAFND 44


>sp|METE_SACI3|METHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 DEEMKEAFQN 10
DE+++EAF +
Sbjct: 35 DEDLQEAFND 44


>sp|METE_SACI2|METHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DEEMKEAFQN 10
DE+++EAF +
Sbjct: 35 DEDLQEAFND 44


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DEEMKEAFQ 9
DEE+K+AF+
Sbjct: 17 DEEIKKAFR 25


>sp|MER_METKA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanopyrus kandleri (strain AV19 /

Query: 1 DEEMKEAF 8
DE+M EAF
Sbjct: 291 DEDMIEAF 298


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EEMKEAFQN 10
EE++E F+N
Sbjct: 50 EELREIFEN 58


>sp|METE_SULTO|METHIONINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DEEMKEAFQN 10
DE+++EAF +
Sbjct: 35 DEDLQEAFDD 44




106|Sequence|526|535|EAFQNAYLEL

>sp|VHCG_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit G|Archaeoglobus profundus (strain

Query: 1 EAFQNAYLE 9
E F+NAY++
Sbjct: 110 ELFENAYIK 118


>sp|Y312_METJA|UNCHARACTERIZED protein MJ0312|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EAFQNAYLEL 10
E +NA+LEL
Sbjct: 102 ELLKNAFLEL 111


>sp|ILVD_METVS|DIHYDROXY-ACID dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EAFQNAYL 8
EAF+NA L
Sbjct: 252 EAFENAIL 259


>sp|ILVD_METMP|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EAFQNAYL 8
EAF+NA L
Sbjct: 252 EAFENAIL 259


>sp|ILVD_METM7|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C7 /

Query: 1 EAFQNAYL 8
EAF+NA L
Sbjct: 252 EAFENAIL 259


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 1 EAFQNAYL 8
EAF+NA L
Sbjct: 252 EAFENAIL 259


>sp|ILVD_METM5|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C5 /

Query: 1 EAFQNAYL 8
EAF+NA L
Sbjct: 252 EAFENAIL 259


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EAFQNAYL 8
EAF+NA L
Sbjct: 252 EAFENAIL 259


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 AFQNAYLEL 10
AF NA LEL
Sbjct: 305 AFHNAGLEL 313


>sp|SFSA_SULTO|SUGAR fermentation stimulation protein homolog|Sulfurisphaera tokodaii

Query: 2 AFQNAYLEL 10
AF N Y+E+
Sbjct: 107 AFDNTYVEV 115


>sp|ARCH_PYRAE|PROTEIN archease|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EAFQNAYLEL 10
EAF+NA L L
Sbjct: 29 EAFKNAALAL 38




107|Sequence|531|540|AYLELGGLGE

>sp|METK_METMI|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 AYLELGG 7
AYLELGG
Sbjct: 71 AYLELGG 77


>sp|PURT_SACS2|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Saccharolobus

Query: 4 ELGGLG 9
ELGGLG
Sbjct: 261 ELGGLG 266


>sp|SMC_METJA|CHROMOSOME partition protein Smc|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YLELGGLGE 10
Y E+GG+G+
Sbjct: 1042 YKEIGGIGK 1050


>sp|COXX_SACS2|PROTOHEME IX farnesyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 AYLELGGLG 9
AYL+LG LG
Sbjct: 9 AYLKLGKLG 17


>sp|COXX_SACI7|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 AYLELGGLG 9
AYL+LG LG
Sbjct: 9 AYLKLGKLG 17


>sp|COXX_SACI6|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 AYLELGGLG 9
AYL+LG LG
Sbjct: 9 AYLKLGKLG 17


>sp|COXX_SACI4|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 AYLELGGLG 9
AYL+LG LG
Sbjct: 9 AYLKLGKLG 17


>sp|COXX_SACI3|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 AYLELGGLG 9
AYL+LG LG
Sbjct: 9 AYLKLGKLG 17


>sp|COXX_SACI2|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 AYLELGGLG 9
AYL+LG LG
Sbjct: 9 AYLKLGKLG 17


>sp|COXX_SACI1|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 AYLELGGLG 9
AYL+LG LG
Sbjct: 9 AYLKLGKLG 17


>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AYLELGGL 8
+Y++LGGL
Sbjct: 404 SYIDLGGL 411


>sp|FLPA_THESM|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus sibiricus (strain DSM

Query: 1 AYLELGGLG 9
AYL+ GG G
Sbjct: 165 AYLKSGGYG 173


>sp|END4_NITMS|PROBABLE endonuclease 4|Nitrosopumilus maritimus (strain SCM1)

Query: 2 YLELGGLGE 10
+L +GG+GE
Sbjct: 231 HLGMGGIGE 239


>sp|FLPA_PYRFU|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 1 AYLELGGLG 9
AYL+ GG G
Sbjct: 166 AYLKRGGYG 174


>sp|COXX_HYPBU|PROTOHEME IX farnesyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 AYLELGGLGE 10
AY+ GGLG+
Sbjct: 32 AYIVGGGLGK 41


>sp|VHCG_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit G|Archaeoglobus profundus (strain

Query: 1 AYLELGGLG 9
AYL +GG G
Sbjct: 6 AYLLVGGCG 14


>sp|CDVB1_SULAC|CELL division protein B1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LELGGLGE 10
+ELG LGE
Sbjct: 148 IELGELGE 155




108|Sequence|536|545|GGLGERVLGF

>sp|Y2307_ARCFU|UNCHARACTERIZED protein AF_2307|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGLGERVL 8
G LGER+L
Sbjct: 329 GSLGERIL 336


>sp|RIBL_METPE|FAD synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GGLGERVL 8
GG G+RVL
Sbjct: 117 GGYGDRVL 124


>sp|SYFB_METBU|PHENYLALANINE--TRNA ligase beta subunit|Methanococcoides burtonii (strain DSM 6242

Query: 2 GLGERVLGF 10
GLG+ ++GF
Sbjct: 526 GLGQPIVGF 534


>sp|CISY_HALVD|CITRATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 4 GERVLGF 10
GERV GF
Sbjct: 257 GERVAGF 263


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 2 GLGERVLG 9
GLGE V+G
Sbjct: 225 GLGESVVG 232


>sp|HOSA_SULTO|HOMOCITRATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GLGERV 7
GLGERV
Sbjct: 226 GLGERV 231


>sp|HOSA_SULAC|HOMOCITRATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GLGERV 7
GLGERV
Sbjct: 234 GLGERV 239


>sp|HOSA_SACS2|HOMOCITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GLGERV 7
GLGERV
Sbjct: 227 GLGERV 232


>sp|HOSA_SACI7|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 GLGERV 7
GLGERV
Sbjct: 227 GLGERV 232


>sp|HOSA_SACI6|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GLGERV 7
GLGERV
Sbjct: 227 GLGERV 232


>sp|HOSA_SACI4|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GLGERV 7
GLGERV
Sbjct: 227 GLGERV 232


>sp|HOSA_SACI3|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 GLGERV 7
GLGERV
Sbjct: 227 GLGERV 232


>sp|HOSA_SACI2|HOMOCITRATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GLGERV 7
GLGERV
Sbjct: 227 GLGERV 232


>sp|HOSA_SACI1|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 GLGERV 7
GLGERV
Sbjct: 227 GLGERV 232


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 2 GLGERVLGF 10
GL ER+ GF
Sbjct: 116 GLVERITGF 124


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 GGLGERVLGF 10
GG+ R++GF
Sbjct: 799 GGIVGRIIGF 808


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC

Query: 1 GGLGER 6
GGLGER
Sbjct: 42 GGLGER 47


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 GGLGERVLGF 10
GG+ R++GF
Sbjct: 805 GGVVGRIIGF 814


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 GGLGERVLGF 10
GG+ R++GF
Sbjct: 800 GGVVGRIIGF 809


>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 1 GGLGERVLGF 10
G GE VLGF
Sbjct: 49 GETGEEVLGF 58




109|Sequence|541|550|RVLGFCHYYL

>sp|RTCA_KORCO|RNA 3'-terminal phosphate cyclase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 RVLGFCH 7
RVLG CH
Sbjct: 188 RVLGRCH 194


>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 2 VLGFCH 7
V GFCH
Sbjct: 80 VFGFCH 85


>sp|HIS3_METMJ|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RVLGFCHYY 9
R G+ HYY
Sbjct: 37 RTTGYAHYY 45


>sp|HIS3_METM7|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 4 GFCHYY 9
GF HYY
Sbjct: 54 GFMHYY 59


>sp|HIS3_METM6|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus maripaludis (strain C6 /

Query: 4 GFCHYY 9
GF HYY
Sbjct: 54 GFMHYY 59


>sp|HIS3_METM5|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 4 GFCHYY 9
GF HYY
Sbjct: 54 GFMHYY 59


>sp|HIS3_NATPD|PHOSPHORIBOSYL-AMP cyclohydrolase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RVLGFCHYY 9
R G+ HYY
Sbjct: 40 RETGYAHYY 48


>sp|HIS3_METHJ|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RVLGFCHYY 9
R G+ HYY
Sbjct: 48 RSTGYAHYY 56


>sp|GGR2_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanococcoides burtonii (strain DSM 6242

Query: 5 FCHYYL 10
FC++YL
Sbjct: 194 FCYFYL 199


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 6 CHYYL 10
CHYY+
Sbjct: 105 CHYYI 109


>sp|AATC_ARCFU|A-TYPE ATP synthase subunit C|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RVLGFCHYY 9
RVLG+ YY
Sbjct: 320 RVLGWGKYY 328


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 6 CHYYL 10
CHYY+
Sbjct: 101 CHYYI 105


>sp|ACDE1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Archaeoglobus

Query: 3 LGFCHYYL 10
LGF YYL
Sbjct: 126 LGFLPYYL 133


>sp|AMPD_ARCFU|ANHYDROMEVALONATE phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GFCHYY 9
G CHY+
Sbjct: 322 GSCHYF 327


>sp|QUEC_METHJ|7-CYANO-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 VLGFCHYYL 10
+ G CHY L
Sbjct: 197 ICGSCHYRL 205


>sp|CYDE_METMP|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VLGFCHY 8
V+G C+Y
Sbjct: 298 VIGLCYY 304


>sp|CYDE_METM7|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain C7 /

Query: 2 VLGFCHY 8
V+G C+Y
Sbjct: 299 VIGLCYY 305


>sp|CYDE_METM6|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain C6 /

Query: 2 VLGFCHY 8
V+G C+Y
Sbjct: 299 VIGLCYY 305


>sp|PELO_METBF|PROTEIN pelota homolog|Methanosarcina barkeri (strain Fusaro /

Query: 3 LGFCHYY 9
+GF H+Y
Sbjct: 146 IGFVHHY 152


>sp|ARGD_METKA|ACETYLORNITHINE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 VLGFCH 7
VLG CH
Sbjct: 49 VLGHCH 54


>sp|PROA_METBU|GAMMA-GLUTAMYL phosphate reductase|Methanococcoides burtonii (strain DSM 6242

Query: 4 GFCHYYL 10
G CH Y+
Sbjct: 229 GICHVYV 235


>sp|PROA_METMA|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GFCHYYL 10
G CH Y+
Sbjct: 229 GICHIYV 235


>sp|PROA_METBF|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina barkeri (strain Fusaro /

Query: 4 GFCHYYL 10
G CH Y+
Sbjct: 229 GICHIYV 235


>sp|PROA_METAC|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GFCHYYL 10
G CH Y+
Sbjct: 229 GICHIYV 235


>sp|VHCD_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Archaeoglobus profundus (strain

Query: 3 LGFCHY 8
LG CHY
Sbjct: 70 LGDCHY 75


>sp|HDRB1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina acetivorans

Query: 6 CHYY 9
CHYY
Sbjct: 171 CHYY 174




110|Sequence|546|555|CHYYLPEEQF

>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 YYLPEEQF 10
+Y+PE+QF
Sbjct: 280 FYVPEKQF 287


>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 YYLPEEQF 10
+Y+PE+QF
Sbjct: 281 FYVPEKQF 288


>sp|HACA_METTH|PROBABLE methanogen homoaconitase large subunit|Methanothermobacter

Query: 1 CHYYLPEEQF 10
CH LPE F
Sbjct: 107 CHQVLPERGF 116


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 4 YLPEEQF 10
Y+PEE+F
Sbjct: 559 YMPEEEF 565


>sp|HACA_METMA|PROBABLE methanogen homoaconitase large subunit|Methanosarcina mazei

Query: 1 CHYYLPEEQF 10
CH LPE F
Sbjct: 78 CHQVLPENGF 87


>sp|HACA_METAC|PROBABLE methanogen homoaconitase large subunit|Methanosarcina acetivorans

Query: 1 CHYYLPEEQF 10
CH LPE F
Sbjct: 111 CHQVLPENGF 120


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 4 YLPEEQF 10
Y+PEE+F
Sbjct: 560 YIPEEEF 566


>sp|KAE1_METTP|TRNA N6-adenosine threonylcarbamoyltransferase|Methanothrix

Query: 3 YYLPEEQF 10
+YLPE +F
Sbjct: 274 FYLPERRF 281


>sp|Y3525_METJA|UNCHARACTERIZED protein MJECL25|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 LPEEQF 10
LPEEQF
Sbjct: 79 LPEEQF 84


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HYYLPEEQ 9
HY +PEE+
Sbjct: 272 HYVIPEEE 279


>sp|Y2310_ARCFU|MEMO1 family protein AF_2310|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HYYLPEEQ 9
H+YLP+E+
Sbjct: 176 HHYLPDEE 183


>sp|UVRB_METAC|UVRABC system protein B|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HYYLPEEQ 9
HY +PEE+
Sbjct: 272 HYVIPEEE 279


>sp|SEPS_METLZ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 YYLPEEQ 9
YY+PE Q
Sbjct: 276 YYMPETQ 282


>sp|RUBH_METTH|PUTATIVE rubredoxin|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 CHYYLPEEQF 10
C Y +PE +F
Sbjct: 7 CGYQIPEGEF 16


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 YLPEEQF 10
Y PEE+F
Sbjct: 560 YTPEEEF 566


>sp|KAE1B_METMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 YYLPEEQF 10
+Y+PE++F
Sbjct: 280 FYVPEKRF 287


>sp|KAE1B_METM7|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 YYLPEEQF 10
+Y+PE +F
Sbjct: 280 FYVPEREF 287


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 YYLPEEQF 10
+Y+PE +F
Sbjct: 280 FYVPEREF 287


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 YYLPEEQF 10
+Y+PE +F
Sbjct: 280 FYVPEREF 287


>sp|KAE1B_METBF|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 YYLPEEQF 10
+Y+PE++F
Sbjct: 280 FYVPEKRF 287


>sp|KAE1B_METAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 YYLPEEQF 10
+Y+PE++F
Sbjct: 280 FYVPEKRF 287


>sp|LEUC_METTH|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanothermobacter

Query: 1 CHYYLPEE 8
CH LPE+
Sbjct: 102 CHQVLPEK 109


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 1 CHYYLPEE 8
CH LPE+
Sbjct: 102 CHQVLPEK 109


>sp|LEUC_METJA|ISOPROPYLMALATE/CITRAMALATE isomerase large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CHYYLPEE 8
CH LPE+
Sbjct: 102 CHQVLPEK 109


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 1 CHYYLPEE 8
CH LPE+
Sbjct: 102 CHQVLPEK 109


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 YYLPEEQ 9
YY+PE Q
Sbjct: 276 YYMPETQ 282


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YYLPEEQ 9
YYLPE++
Sbjct: 973 YYLPEKR 979


>sp|AROK_METTP|SHIKIMATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 LPEEQF 10
+PEEQF
Sbjct: 167 IPEEQF 172


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 YYLPEEQ 9
YYLPE++
Sbjct: 1458 YYLPEKR 1464


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YYLPEEQ 9
YYLPE++
Sbjct: 1138 YYLPEKR 1144


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 YYLPEEQ 9
YYLPE++
Sbjct: 1160 YYLPEKR 1166


>sp|CMR1A_PYRFU|CRISPR system Cmr subunit Cmr1-1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HYYLPEEQF 10
HYY P +F
Sbjct: 113 HYYPPGSRF 121


>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 1 CHYYLPEE 8
CH LPE+
Sbjct: 101 CHQVLPEK 108


>sp|GCSH3_SULTO|PROBABLE glycine cleavage system H|Sulfurisphaera tokodaii (strain DSM

Query: 3 YYLPEEQ 9
YY PEE
Sbjct: 13 YYYPEEH 19


>sp|NDK_METST|NUCLEOSIDE diphosphate kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CHYYLPEE 8
C Y LP+E
Sbjct: 138 CDYELPDE 145


>sp|KAE1_METBU|TRNA N6-adenosine threonylcarbamoyltransferase|Methanococcoides burtonii

Query: 3 YYLPEEQF 10
+Y+PE +F
Sbjct: 278 FYVPERRF 285


>sp|RS13_METAC|SMALL ribosomal subunit protein uS13|Methanosarcina acetivorans (strain

Query: 4 YLPEEQ 9
YLPEE+
Sbjct: 69 YLPEEE 74


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 HYYLPEEQ 9
HY LP E+
Sbjct: 642 HYKLPTEE 649


>sp|Y1357_HALVD|PUTATIVE transcriptional regulator HVO_1357|Haloferax volcanii (strain

Query: 1 CHYYLPEEQF 10
C Y+L E+F
Sbjct: 33 CRYWLDGERF 42


>sp|AGL3_SULAC|UDP-SULFOQUINOVOSE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 HYYLPEEQ 9
HYY PE +
Sbjct: 332 HYYNPERK 339


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 HYYLPEEQ 9
HY LP E+
Sbjct: 639 HYKLPTEE 646


>sp|CBIT_METJA|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 3 YYLPEEQF 10
Y +P+E+F
Sbjct: 3 YMIPDEEF 10


>sp|HDRB_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit B|Methanothermobacter

Query: 1 CHYYLPEEQ 9
CH+ P E+
Sbjct: 153 CHFLKPSEE 161


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 2 HYYLPEEQF 10
HY +PE++
Sbjct: 261 HYSIPEQRL 269


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 3 YYLPEEQ 9
YY+P+E+
Sbjct: 385 YYVPDEE 391


>sp|HDLB_ARCPA|HETERODISULFIDE reductase subunit B-like protein|Archaeoglobus profundus (strain

Query: 1 CHYYLPEEQF 10
CH+ P E +
Sbjct: 155 CHFLWPSEVY 164


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 3 YYLPEEQ 9
YY+P+ Q
Sbjct: 299 YYMPDSQ 305


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YYLPEE 8
YY PEE
Sbjct: 658 YYTPEE 663




111|Sequence|551|560|PEEQFPKGFA

>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PEEQFPKGFA 10
PE+ +PKG A
Sbjct: 630 PEKHWPKGIA 639


>sp|HIS1_IGNH4|ATP phosphoribosyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 EQFPKGF 9
E+ PKGF
Sbjct: 106 EELPKGF 112


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PEEQFPKGFA 10
PE ++P+G A
Sbjct: 679 PESKWPRGIA 688


>sp|SRP54_METST|SIGNAL recognition particle 54 kDa|Methanosphaera stadtmanae (strain

Query: 2 EEQFPKGFA 10
EE+ PKG +
Sbjct: 61 EEELPKGLS 69


>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 EQFPKGFA 10
E++PKGF+
Sbjct: 439 EKYPKGFS 446


>sp|AROA_METJA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocaldococcus jannaschii (strain

Query: 4 QFPKGFA 10
Q PKG+A
Sbjct: 105 QIPKGYA 111


>sp|NFI_NANEQ|BIFUNCTIONAL methyltransferase-like/endonuclease|Nanoarchaeum equitans (strain

Query: 3 EQFPKGF 9
EQ PKG+
Sbjct: 28 EQIPKGY 34


>sp|Y444_METMA|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina mazei

Query: 1 PEEQFPKG 8
PE++ PKG
Sbjct: 204 PEKEEPKG 211


>sp|TNAA_HALSA|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PEEQFP 6
P EQFP
Sbjct: 354 PREQFP 359


>sp|TNAA_HALS3|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PEEQFP 6
P EQFP
Sbjct: 354 PREQFP 359


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PEEQFPKGFA 10
PEE +PK A
Sbjct: 601 PEELWPKAIA 610


>sp|SYH_NANEQ|HISTIDINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PEEQFPKGF 9
PEE +PK F
Sbjct: 216 PEEFYPKEF 224


>sp|TRUD_PYRNV|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum neutrophilum (strain DSM

Query: 3 EQFPKGF 9
E FP+GF
Sbjct: 232 EAFPRGF 238


>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PEEQFPKGFA 10
P EQ PK F
Sbjct: 77 PREQIPKVFG 86


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 PEEQFPKG 8
PE+++PKG
Sbjct: 603 PEDKWPKG 610


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 5 FPKGF 9
FPKGF
Sbjct: 4 FPKGF 8


>sp|Y405_METJA|UNCHARACTERIZED protein MJ0405|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PEEQFPK 7
PE+ FPK
Sbjct: 125 PEDAFPK 131


>sp|TOP6B_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 2 EEQFPKGFA 10
+EQ PK FA
Sbjct: 87 KEQIPKVFA 95


>sp|Y1965_THEON|PROTEIN TON_1965|Thermococcus onnurineus (strain NA1)

Query: 2 EEQFPKG 8
EE++PKG
Sbjct: 191 EEEYPKG 197


>sp|Y686_METJA|UNCHARACTERIZED protein MJ0686|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FPKGF 9
FPKGF
Sbjct: 465 FPKGF 469


>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 2 EEQFPKGFA 10
+EQ PK FA
Sbjct: 87 KEQIPKVFA 95




112|Sequence|556|565|PKGFAFDCDD

>sp|ARGJ_ARCFU|ARGININE biosynthesis bifunctional protein ArgJ|Archaeoglobus fulgidus

Query: 2 KGFAFDCD 9
KGFA CD
Sbjct: 358 KGFAIGCD 365


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKGFAFDCDD 10
P+GF FD ++
Sbjct: 332 PEGFEFDINE 341


>sp|SYC_THEVO|CYSTEINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KGFAFDCDD 10
KG+A++ DD
Sbjct: 130 KGYAYETDD 138


>sp|CARA_PYRAE|CARBAMOYL phosphate synthase small chain|Pyrobaculum aerophilum (strain ATCC

Query: 4 FAFDCD 9
AFDCD
Sbjct: 197 LAFDCD 202


>sp|Y224_METJA|UNCHARACTERIZED protein MJ0224|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKGFAFDCD 9
P +AFDC+
Sbjct: 33 PICYAFDCN 41


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 2 KGFAFDCD 9
+GFAF C+
Sbjct: 627 EGFAFRCE 634


>sp|G3PP_METJA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanocaldococcus jannaschii (strain

Query: 2 KGFAFDCDD 10
KG FD DD
Sbjct: 3 KGILFDLDD 11


>sp|AAT_SACS2|ASPARTATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KGFAFDCDD 10
+GF+ D DD
Sbjct: 154 EGFSIDVDD 162


>sp|IXTPA_METTM|DITP/XTP pyrophosphatase|Methanothermobacter marburgensis (strain ATCC

Query: 2 KGFAFD 7
+GFAFD
Sbjct: 138 RGFAFD 143


>sp|Y1365_METJA|UNCHARACTERIZED protein MJ1365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKGFAFDCDD 10
P+G A + DD
Sbjct: 44 PEGIAVELDD 53




113|Sequence|561|570|FDCDDVNFTT

>sp|RS17_METLZ|SMALL ribosomal subunit protein uS17|Methanocorpusculum labreanum

Query: 2 DCDDVN 7
DCDDVN
Sbjct: 15 DCDDVN 20


>sp|MTRA_METFA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanocaldococcus fervens (strain

Query: 2 DCDDVNFTT 10
DC+DVN T
Sbjct: 138 DCEDVNKIT 146


>sp|RS17_METBU|SMALL ribosomal subunit protein uS17|Methanococcoides burtonii (strain

Query: 2 DCDDVN 7
+CDD+N
Sbjct: 15 ECDDIN 20


>sp|RS17_METHJ|SMALL ribosomal subunit protein uS17|Methanospirillum hungatei JF-1

Query: 2 DCDDVN 7
DC DVN
Sbjct: 15 DCSDVN 20


>sp|RS17_SULTO|SMALL ribosomal subunit protein uS17|Sulfurisphaera tokodaii (strain

Query: 3 CDDVN 7
CDD+N
Sbjct: 23 CDDIN 27


>sp|Y1620_METJA|UNCHARACTERIZED protein MJ1620|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FDCDDVNFTT 10
FD +DV TT
Sbjct: 125 FDAEDVKGTT 134


>sp|Y1051_METJA|UNCHARACTERIZED protein MJ1051|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DDVNFTT 10
DD+N TT
Sbjct: 174 DDINLTT 180




114|Sequence|566|575|VNFTTDNLCF

>sp|PCNA1_SACS2|DNA polymerase sliding clamp 1|Saccharolobus solfataricus (strain ATCC

Query: 1 VNFTTD 6
VNFTTD
Sbjct: 134 VNFTTD 139


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 2 NFTTDNLCF 10
NF DN C+
Sbjct: 343 NFADDNTCY 351


>sp|Y644_METJA|UNCHARACTERIZED protein MJ0644|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NFTTDNLC 9
NF+ NLC
Sbjct: 18 NFSVPNLC 25


>sp|NPD1_PYRAE|NAD-DEPENDENT protein deacetylase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VNFTTDNL 8
V+FTTD L
Sbjct: 3 VDFTTDEL 10




115|Sequence|571|580|DNLCFVGLMS

>sp|TMG10_ARCFU|TRNA (guanine(10)-N2)-dimethyltransferase|Archaeoglobus fulgidus (strain

Query: 1 DNLCFVGLM 9
D+ C+VGL+
Sbjct: 127 DDKCYVGLL 135


>sp|ARGC_METJA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NLCFVG 7
NLCF G
Sbjct: 57 NLCFTG 62


>sp|CDC6Z_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 2 NLCFVGL 8
N+C VGL
Sbjct: 149 NVCIVGL 155


>sp|CDC6V_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 2 NLCFVGL 8
N+C VGL
Sbjct: 149 NVCIVGL 155




116|Sequence|576|585|VGLMSMIDPP

>sp|TNAA_HALSA|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VGLMSMIDPP 10
VGL ++PP
Sbjct: 301 VGLREAVEPP 310


>sp|TNAA_HALS3|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VGLMSMIDPP 10
VGL ++PP
Sbjct: 301 VGLREAVEPP 310


>sp|CYNS_SULTO|CYANATE hydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GLMSMID 8
G+MSMID
Sbjct: 112 GIMSMID 118


>sp|IPYR_METKA|INORGANIC pyrophosphatase|Methanopyrus kandleri (strain AV19 /

Query: 1 VGLMSMID 8
+GLM M+D
Sbjct: 92 IGLMKMLD 99




117|Sequence|581|590|MIDPPRAAVP

>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 1 MIDPPRAAV 9
++DPPRA +
Sbjct: 340 IVDPPRAGL 348


>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 MIDPPRAAV 9
++DPPRA +
Sbjct: 373 IVDPPRAGL 381


>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 MIDPPRAAV 9
++DPPRA +
Sbjct: 338 IVDPPRAGL 346


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 MIDPPRAAV 9
++DPPR +
Sbjct: 339 IVDPPRVGL 347


>sp|MTHK_METTH|CALCIUM-GATED potassium channel MthK|Methanothermobacter thermautotrophicus

Query: 1 MIDPPR 6
+IDPPR
Sbjct: 303 IIDPPR 308


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 MIDPPRAAVP 10
+ DPPR P
Sbjct: 455 LYDPPREDAP 464


>sp|FWDB_METJA|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanocaldococcus

Query: 1 MIDPPRAAVP 10
+IDPP +P
Sbjct: 410 VIDPPEGVLP 419


>sp|Y2513_HALS3|UPF0173 metal-dependent hydrolase OE_2513F|Halobacterium salinarum (strain

Query: 2 IDPPRAAVP 10
+DP AAVP
Sbjct: 162 LDPDAAAVP 170


>sp|Y1038_HALSA|UPF0173 metal-dependent hydrolase VNG_1038C|Halobacterium salinarum (strain

Query: 2 IDPPRAAVP 10
+DP AAVP
Sbjct: 162 LDPDAAAVP 170




118|Sequence|586|595|RAAVPDAVGK

>sp|IDI2_IGNH4|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RAAVPDAV 8
RAA PDA+
Sbjct: 259 RAAAPDAL 266


>sp|PRIS_METHJ|DNA primase small subunit PriS|Methanospirillum hungatei JF-1 (strain

Query: 1 RAAVPDAVG 9
R VP+AVG
Sbjct: 361 RLKVPEAVG 369


>sp|AROA_HALS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 RAAVPDAV 8
R A+PDAV
Sbjct: 77 RPAIPDAV 84


>sp|AROA_HALSA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 RAAVPDAV 8
R A+PDAV
Sbjct: 86 RPAIPDAV 93




119|Sequence|591|600|DAVGKCRSAG

>sp|DNAG_NATPD|DNA primase DnaG|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DAVGKCRSA 9
D VG CRSA
Sbjct: 91 DRVGPCRSA 99


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 1 DAVGKCRSAG 10
DA+ KC S G
Sbjct: 272 DAIHKCESLG 281


>sp|KHSE_SACI7|HOMOSERINE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DAVGKCRSAG 10
DAVG C S
Sbjct: 253 DAVGSCVSGA 262


>sp|KHSE_SACI1|HOMOSERINE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 DAVGKCRSAG 10
DAVG C S
Sbjct: 253 DAVGSCVSGA 262


>sp|KHSE_SACI6|HOMOSERINE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DAVGKCRSAG 10
DAVG C S
Sbjct: 253 DAVGSCVSGA 262


>sp|KHSE_SACI4|HOMOSERINE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DAVGKCRSAG 10
DAVG C S
Sbjct: 253 DAVGSCVSGA 262


>sp|KHSE_SACI3|HOMOSERINE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 DAVGKCRSAG 10
DAVG C S
Sbjct: 253 DAVGSCVSGA 262


>sp|KHSE_SACI2|HOMOSERINE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DAVGKCRSAG 10
DAVG C S
Sbjct: 253 DAVGSCVSGA 262




120|Sequence|596|605|CRSAGIKVIM

>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 CRSAGIKVIM 10
CR AG++V++
Sbjct: 254 CREAGVQVMV 263


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 1 CRSAGIKVI 9
CR GIKVI
Sbjct: 489 CRQLGIKVI 497


>sp|RIBL_ACIB4|FAD synthase|Aciduliprofundum boonei (strain DSM 19572

Query: 1 CRSAGIKV 8
CR GIKV
Sbjct: 105 CRKRGIKV 112


>sp|HIS7_ARCFU|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CRSAGIKVIM 10
CR+AG+ V +
Sbjct: 128 CRNAGLNVYL 137


>sp|COFC_METPS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella paludicola (strain DSM 17711

Query: 2 RSAGIKVIM 10
R AG+KV++
Sbjct: 41 REAGLKVVL 49


>sp|PYCA_ARCFU|PYRUVATE carboxylase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CRSAGIKVI 9
CR GIK +
Sbjct: 21 CRELGIKTV 29


>sp|THIC_METKA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 CRSAGIKVIM 10
CR AG++ ++
Sbjct: 255 CREAGVQAMV 264


>sp|COFD_METPE|2-PHOSPHO-L-LACTATE transferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 CRSAGIK 7
CRS G+K
Sbjct: 118 CRSFGVK 124




121|Sequence|601|610|IKVIMVTGDH

>sp|DP2S_METTH|DNA polymerase II small subunit|Methanothermobacter thermautotrophicus

Query: 1 IKVIMVTGDH 10
IK++M+ G+H
Sbjct: 311 IKIVMIPGNH 320


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IKVIMVTGDH 10
+KV M TGD+
Sbjct: 96 LKVAMATGDY 105


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 1 IKVIMVTGDH 10
+KV M TGD+
Sbjct: 96 LKVAMATGDY 105


>sp|OFOA1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 2 KVIMVTGDH 10
K+++ +GDH
Sbjct: 373 KIVLASGDH 381


>sp|OFOA_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Sulfolobus sp

Query: 2 KVIMVTGDH 10
K+++ +GDH
Sbjct: 373 KIVLASGDH 381


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 1 IKVIMVTGDH 10
IKV M+TGD+
Sbjct: 566 IKVGMITGDN 575


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 KVIMVTGDH 10
K+++ +GDH
Sbjct: 385 KIVLASGDH 393


>sp|MRE11_METJA|DNA double-strand break repair protein|Methanocaldococcus jannaschii

Query: 1 IKVIMVTGDH 10
IKV +V G+H
Sbjct: 76 IKVYIVAGNH 85


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IKVIMVTGDH 10
IK +M+TGD+
Sbjct: 531 IKCMMLTGDN 540


>sp|Y1176_SACI7|UPF0200 protein YG5714_1176|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IKVIMVTG 8
IKVI++TG
Sbjct: 8 IKVILITG 15


>sp|Y1675_SACI1|UPF0200 protein YN1551_1675|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IKVIMVTG 8
IKVI++TG
Sbjct: 8 IKVILITG 15


>sp|Y1277_SACI2|UPF0200 protein LS215_1277|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IKVIMVTG 8
IKVI++TG
Sbjct: 8 IKVILITG 15


>sp|Y1244_SACI3|UPF0200 protein M1627_1244|Saccharolobus islandicus (strain M.16.27)

Query: 1 IKVIMVTG 8
IKVI++TG
Sbjct: 8 IKVILITG 15


>sp|Y1180_SACI4|UPF0200 protein M1425_1180|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IKVIMVTG 8
IKVI++TG
Sbjct: 8 IKVILITG 15


>sp|Y1041_SACS2|UPF0200 protein SSO1041|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IKVIMVTG 8
IKVI++TG
Sbjct: 8 IKVILITG 15


>sp|Y1169_SACI6|UPF0200 protein M164_1169|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IKVIMVTG 8
IKVI++TG
Sbjct: 8 IKVILITG 15


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 5 MVTGDH 10
MVTGDH
Sbjct: 479 MVTGDH 484


>sp|HEM3_METJA|PROBABLE porphobilinogen deaminase|Methanocaldococcus jannaschii (strain

Query: 1 IKVIMVTGD 9
IK+I TGD
Sbjct: 32 IKIIKTTGD 40


>sp|HEM3_PYRAE|PROBABLE porphobilinogen deaminase|Pyrobaculum aerophilum (strain ATCC

Query: 1 IKVIMVTGD 9
IK++ TGD
Sbjct: 35 IKIVKTTGD 43


>sp|FLAH_SULAC|ARCHAEAL flagellar ATP-binding protein FlaH|Sulfolobus acidocaldarius

Query: 4 IMVTGDH 10
IM+ GDH
Sbjct: 23 IMIEGDH 29


>sp|HEM3_PYRAR|PROBABLE porphobilinogen deaminase|Pyrobaculum arsenaticum (strain DSM

Query: 1 IKVIMVTGD 9
IK++ TGD
Sbjct: 35 IKIVKTTGD 43


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 2 KVIMVTGD 9
KVI +TGD
Sbjct: 448 KVICITGD 455


>sp|COFC_METBU|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 5 MVTGDH 10
+VTGDH
Sbjct: 97 LVTGDH 102


>sp|SUI1_PICTO|PROTEIN translation factor SUI1 homolog|Picrophilus torridus (strain ATCC

Query: 2 KVIMVTGDH 10
K+I + GDH
Sbjct: 73 KIIELQGDH 81


>sp|PGP_METTH|PHOSPHOGLYCOLATE phosphatase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IKVIMVTGD 9
+ VIMVTG+
Sbjct: 35 VPVIMVTGN 43




122|Sequence|606|615|VTGDHPITAK

>sp|Y1653_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 4 DHPITAK 10
DHPIT+K
Sbjct: 364 DHPITSK 370


>sp|Y1063_METJA|UNCHARACTERIZED protein MJ1063|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VTGDHPITA 9
+TGD+P+T+
Sbjct: 97 ITGDNPLTS 105


>sp|GGR_PYRAB|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 VTGDHPITAK 10
+ DHP TAK
Sbjct: 221 IASDHPQTAK 230


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VTGDHPIT 8
VTGDH IT
Sbjct: 82 VTGDHNIT 89


>sp|PURP_METTH|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothermobacter thermautotrophicus

Query: 1 VTGDHPITAK 10
+TG+HP+ +
Sbjct: 257 ITGNHPVAMR 266


>sp|PURP_METAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocella arvoryzae (strain DSM

Query: 1 VTGDHPITAK 10
VTG+ PI A+
Sbjct: 259 VTGNFPIVAR 268


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 VTGDHPITAK 10
VTGDH AK
Sbjct: 480 VTGDHVAIAK 489


>sp|PSB2_SULAC|PROTEASOME subunit beta 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VTGDHPITAK 10
+TG+ PIT K
Sbjct: 78 ITGEGPITVK 87


>sp|GSA_METB6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoregula boonei (strain DSM 21154

Query: 1 VTGDHP 6
+TGDHP
Sbjct: 95 ITGDHP 100


>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain ATCC

Query: 1 VTGDHPITAK 10
V+G+HP+ +
Sbjct: 257 VSGNHPVVIR 266


>sp|GSA_METMJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VTGDHP 6
+TGDHP
Sbjct: 95 ITGDHP 100


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain ATCC

Query: 1 VTGDHP 6
VTG+HP
Sbjct: 257 VTGNHP 262


>sp|Y1572_ARCFU|UNCHARACTERIZED protein AF_1572|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VTGDHPITAK 10
+TGD P++ K
Sbjct: 21 LTGDKPLSEK 30


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VTGDHPI 7
VTGDH +
Sbjct: 1151 VTGDHSV 1157


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VTGDHPI 7
+T DHP+
Sbjct: 378 LTADHPV 384


>sp|RL30_AERPE|LARGE ribosomal subunit protein uL30|Aeropyrum pernix (strain ATCC

Query: 1 VTGDHPITAK 10
+ GD P+T K
Sbjct: 75 IVGDKPLTDK 84


>sp|IDI2_METTH|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothermobacter thermautotrophicus (strain

Query: 1 VTGDHPITAK 10
+TG HP + K
Sbjct: 64 ITGGHPASMK 73


>sp|PSB2_SULTO|PROTEASOME subunit beta 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VTGDHPITAK 10
+TG PIT K
Sbjct: 81 ITGMRPITIK 90




123|Sequence|611|620|PITAKAIAKG

>sp|RISB_PYRFU|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PITAKAIAK 9
PIT K IAK
Sbjct: 60 PITVKKIAK 68


>sp|COAD_METBF|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PITAKAIAKG 10
PI++ IAKG
Sbjct: 133 PISSTRIAKG 142


>sp|KPRS_METMA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PITAKAIAK 9
P++A+AIA+
Sbjct: 111 PVSARAIAR 119


>sp|COAD_METAC|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PITAKAIAKG 10
PI++ IAKG
Sbjct: 133 PISSTRIAKG 142


>sp|PSB2_THEKO|PROTEASOME subunit beta 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PITAKAIA 8
P+TAKA+A
Sbjct: 79 PMTAKAMA 86


>sp|RS13_METAC|SMALL ribosomal subunit protein uS13|Methanosarcina acetivorans (strain

Query: 3 TAKAIAKG 10
TAK IAKG
Sbjct: 51 TAKLIAKG 58


>sp|PSB2_THESM|PROTEASOME subunit beta 2|Thermococcus sibiricus (strain DSM 12597

Query: 1 PITAKAIA 8
P+TAKA+A
Sbjct: 79 PMTAKAMA 86


>sp|ILVC2_SACS2|PUTATIVE ketol-acid reductoisomerase 2|Saccharolobus solfataricus (strain

Query: 4 AKAIAKG 10
AKAIAKG
Sbjct: 164 AKAIAKG 170


>sp|ILVC3_SACS2|PUTATIVE ketol-acid reductoisomerase 3|Saccharolobus solfataricus (strain

Query: 4 AKAIAKG 10
AKAIAKG
Sbjct: 164 AKAIAKG 170


>sp|PSA_ARCFU|PROTEASOME subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PITAKAIAK 9
PIT K +AK
Sbjct: 106 PITVKELAK 114




124|Sequence|616|625|AIAKGVGIIS

>sp|ILVC2_SACS2|PUTATIVE ketol-acid reductoisomerase 2|Saccharolobus solfataricus (strain

Query: 1 AIAKGVGII 9
AIAKG+G I
Sbjct: 166 AIAKGIGAI 174


>sp|CHED_PYRAB|PROBABLE chemoreceptor glutamine deamidase CheD|Pyrococcus abyssi (strain

Query: 1 AIAKGVGIIS 10
A+ KG GIIS
Sbjct: 13 AVGKGEGIIS 22


>sp|ILVC3_SACS2|PUTATIVE ketol-acid reductoisomerase 3|Saccharolobus solfataricus (strain

Query: 1 AIAKGVGII 9
AIAKG+G I
Sbjct: 166 AIAKGIGAI 174


>sp|ARGJ_METMA|GLUTAMATE N-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AIAKGVGIIS 10
AIAKG G+I
Sbjct: 166 AIAKGSGMIE 175


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AIAKGVGIIS 10
AIAKG G+I
Sbjct: 166 AIAKGSGMIE 175


>sp|CHED_PYRHO|PROBABLE chemoreceptor glutamine deamidase CheD|Pyrococcus horikoshii

Query: 1 AIAKGVGIIS 10
A+ KG GIIS
Sbjct: 12 AVGKGNGIIS 21


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 1 AIAKGVGII 9
AIA+G G++
Sbjct: 210 AIAEGYGVV 218


>sp|ARGJ_METTH|GLUTAMATE N-acetyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 AIAKGVGIIS 10
A+AKG G+I+
Sbjct: 175 AVAKGSGMIA 184


>sp|ARGJ_ARCFU|ARGININE biosynthesis bifunctional protein ArgJ|Archaeoglobus fulgidus

Query: 1 AIAKGVGIIS 10
A+AKG G+I+
Sbjct: 157 AVAKGAGMIA 166


>sp|CHED_THEKO|PROBABLE chemoreceptor glutamine deamidase CheD|Thermococcus kodakarensis

Query: 1 AIAKGVGIIS 10
A+AK GIIS
Sbjct: 11 AVAKKTGIIS 20


>sp|ILVC_IGNAA|KETOL-ACID reductoisomerase (NAD(P)(+))|Ignisphaera aggregans (strain DSM

Query: 1 AIAKGVG 7
AIAKG+G
Sbjct: 167 AIAKGIG 173


>sp|ILVC_SACS2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 1 AIAKGVG 7
AIAKG+G
Sbjct: 170 AIAKGIG 176




125|Sequence|621|630|VGIISEGNET

>sp|UPPS_THEVO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermoplasma

Query: 1 VGIISEGN 8
VGII++GN
Sbjct: 32 VGIITDGN 39


>sp|UPPS_THEAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermoplasma

Query: 1 VGIISEGN 8
+GII++GN
Sbjct: 32 IGIITDGN 39


>sp|UPPS_SULTO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Sulfurisphaera

Query: 1 VGIISEGN 8
VGII +GN
Sbjct: 35 VGIIPDGN 42


>sp|UPPS_SULAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (GGDP specific)|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VGIISEGN 8
VGII +GN
Sbjct: 35 VGIIPDGN 42


>sp|UPPS_SACS2|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Saccharolobus

Query: 1 VGIISEGN 8
VGII +GN
Sbjct: 35 VGIIPDGN 42


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 VGIISEGNET 10
VGI+ EG T
Sbjct: 545 VGIVREGGRT 554


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 2 GIISEGNE 9
GIIS GNE
Sbjct: 187 GIISTGNE 194


>sp|UPPS_METKA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanopyrus

Query: 1 VGIISEGN 8
VGII +GN
Sbjct: 45 VGIIMDGN 52


>sp|G3PP_PYRHO|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VGIISEGN 8
+GII++GN
Sbjct: 113 LGIITDGN 120


>sp|G3PP_PYRAB|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 VGIISEGN 8
+GII++GN
Sbjct: 113 LGIITDGN 120


>sp|UPPS_AERPE|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Aeropyrum pernix

Query: 1 VGIISEGN 8
+GII +GN
Sbjct: 7 IGIIPDGN 14


>sp|Y922_METJA|UNCHARACTERIZED protein MJ0922|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGIISEGN 8
VGIIS+G+
Sbjct: 122 VGIISDGD 129


>sp|LEUC2_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VGIISEGNET 10
VG+I EGN +
Sbjct: 146 VGVILEGNPS 155


>sp|GLNB2_METTL|NITROGEN fixation nifHD region GlnB-like|Methanothermococcus

Query: 1 VGIISEGNET 10
VGIIS+ N T
Sbjct: 88 VGIISKVNRT 97


>sp|RNH_HALSA|RIBONUCLEASE HI|Halobacterium salinarum (strain ATCC 700922

Query: 2 GIISEGNET 10
GI++EG +T
Sbjct: 97 GIVAEGGDT 105




126|Sequence|626|635|EGNETVEDIA

>sp|OTC_CENSY|ORNITHINE carbamoyltransferase|Cenarchaeum symbiosum (strain A)

Query: 2 GNETVEDIA 10
G+ET+E+IA
Sbjct: 107 GHETIEEIA 115


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EGNETVEDI 9
EG TVED+
Sbjct: 161 EGKRTVEDV 169


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EGNETVEDI 9
EG+ TVED+
Sbjct: 166 EGDYTVEDV 174


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 1 EGNETVEDI 9
EG+ TVED+
Sbjct: 168 EGDYTVEDV 176


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EGNETVEDI 9
EG+ TVED+
Sbjct: 166 EGDYTVEDV 174


>sp|BIOB_NATPD|BIOTIN synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GNETVED 8
GNETV+D
Sbjct: 6 GNETVDD 12


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 2 GNETVED 8
GNE +ED
Sbjct: 42 GNERIED 48


>sp|PRIS_HALWD|DNA primase small subunit PriS|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EGNETVED 8
EGN+TVE+
Sbjct: 361 EGNKTVEE 368


>sp|TFE_METMA|TRANSCRIPTION factor E|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EGNETVEDIA 10
EGN T E+IA
Sbjct: 30 EGNVTDEEIA 39




127|Sequence|631|640|VEDIAARLNI

>sp|DHYS2_ARCFU|PROBABLE deoxyhypusine synthase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VEDIAARLNI 10
+E+IA RLN+
Sbjct: 131 LEEIAGRLNV 140


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EDIAARLNI 10
EDI+ +LNI
Sbjct: 205 EDISPKLNI 213


>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VEDIAARLNI 10
VEDIA LN+
Sbjct: 29 VEDIARGLNV 38


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 VEDIAARLN 9
++DI ARLN
Sbjct: 518 IKDIIARLN 526


>sp|PFDA_METS5|PREFOLDIN subunit alpha|Metallosphaera sedula (strain ATCC 51363

Query: 1 VEDIAARLN 9
++DI ARLN
Sbjct: 114 LQDITARLN 122


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 1 VEDIAARLNI 10
VEDIAA +++
Sbjct: 210 VEDIAAVMDV 219


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 VEDIAARLNI 10
+EDI A LN+
Sbjct: 819 IEDIRAILNV 828


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VEDIAARLNI 10
VEDI + LNI
Sbjct: 814 VEDIRSILNI 823


>sp|PYRF_METJA|OROTIDINE 5'-phosphate decarboxylase|Methanocaldococcus jannaschii (strain

Query: 1 VEDIAARLN 9
V+D+A +LN
Sbjct: 97 VQDVAKKLN 105


>sp|SYY_PICTO|TYROSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 DIAARLNI 10
DIA R+NI
Sbjct: 188 DIAERMNI 195


>sp|SYR_METM7|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 EDIAARLNI 10
EDIA LNI
Sbjct: 59 EDIANSLNI 67


>sp|SYFA_SULTO|PHENYLALANINE--TRNA ligase alpha subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EDIAARLNI 10
EDI+ +LNI
Sbjct: 22 EDISKQLNI 30


>sp|DTDA_HALSA|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VEDIAARLN 9
V+D+AA LN
Sbjct: 357 VDDVAAVLN 365


>sp|DTDA_HALS3|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VEDIAARLN 9
V+D+AA LN
Sbjct: 357 VDDVAAVLN 365




128|Sequence|636|645|ARLNIPVSQV

>sp|IF6_METVS|TRANSLATION initiation factor 6|Methanococcus vannielii (strain ATCC 35089

Query: 3 LNIPVSQV 10
LNIPV+Q+
Sbjct: 42 LNIPVTQL 49


>sp|ARGJ_METVS|GLUTAMATE N-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 3 LNIPVSQV 10
LNIP SQ+
Sbjct: 100 LNIPESQI 107


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 RLNIPV 7
RLNIPV
Sbjct: 190 RLNIPV 195


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 ARLNIP 6
ARLNIP
Sbjct: 135 ARLNIP 140


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ARLNIP 6
ARLNIP
Sbjct: 131 ARLNIP 136


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LNIPVSQV 10
LN PVSQ+
Sbjct: 765 LNSPVSQI 772


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ARLNIP 6
ARLNIP
Sbjct: 131 ARLNIP 136


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ARLNIP 6
ARLNIP
Sbjct: 137 ARLNIP 142


>sp|WTPA_PYRHO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LNIPVSQV 10
L+IP+SQV
Sbjct: 38 LSIPLSQV 45


>sp|PSTB_SACS2|PHOSPHATE import ATP-binding protein PstB|Saccharolobus solfataricus (strain

Query: 2 RLNIPVSQV 10
RLN P SQ+
Sbjct: 146 RLNSPASQL 154




129|Sequence|641|650|PVSQVNPRDA

>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 PVSQVNPRDA 10
PV ++PR+A
Sbjct: 42 PVQGIHPREA 51


>sp|KAE1B_METM7|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 PVSQVNPRDA 10
PV ++PR+A
Sbjct: 41 PVQGIHPREA 50


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 PVSQVNPRDA 10
PV ++PR+A
Sbjct: 41 PVQGIHPREA 50


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 PVSQVNPRDA 10
PV ++PR+A
Sbjct: 41 PVQGIHPREA 50


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PVSQVNPR 8
PVSQ+N R
Sbjct: 768 PVSQINVR 775


>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 PVSQVNPRDA 10
P +NPR+A
Sbjct: 35 PKQGINPREA 44


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 PVSQVNPRDA 10
P ++NP DA
Sbjct: 591 PFIEINPDDA 600


>sp|GATD_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain DSM

Query: 1 PVSQVNP 7
P+++VNP
Sbjct: 253 PIAEVNP 259


>sp|GATD_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C6 /

Query: 1 PVSQVNP 7
P+++VNP
Sbjct: 253 PIAEVNP 259


>sp|SPH2_HALSA|SMC-LIKE protein Sph2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PVSQVNP 7
PVS++NP
Sbjct: 328 PVSKLNP 334


>sp|SPH2_HALS3|SMC-LIKE protein Sph2|Halobacterium salinarum (strain ATCC 29341

Query: 1 PVSQVNP 7
PVS++NP
Sbjct: 328 PVSKLNP 334




130|Sequence|646|655|NPRDAKACVI

>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 2 PRDAKACV 9
P+DAK C+
Sbjct: 15 PQDAKPCM 22


>sp|RL1_AERPE|LARGE ribosomal subunit protein uL1|Aeropyrum pernix (strain ATCC

Query: 2 PRDAKACVI 10
P++AK CV+
Sbjct: 59 PKEAKVCVV 67


>sp|RL40_HALSA|LARGE ribosomal subunit protein eL40|Halobacterium salinarum (strain

Query: 1 NPRDAKAC 8
NP DA++C
Sbjct: 22 NPTDAESC 29


>sp|RL40_HALS3|LARGE ribosomal subunit protein eL40|Halobacterium salinarum (strain

Query: 1 NPRDAKAC 8
NP DA++C
Sbjct: 22 NPTDAESC 29




131|Sequence|651|660|KACVIHGTDL

>sp|MTSA_METMA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KACVIHGTDL 10
+ C++ GTD+
Sbjct: 299 RECILQGTDI 308


>sp|TRPA_HALSA|TRYPTOPHAN synthase alpha chain|Halobacterium salinarum (strain ATCC 700922

Query: 1 KACVIHGTDL 10
+AC HG DL
Sbjct: 139 EACRAHGLDL 148


>sp|TRPA_HALS3|TRYPTOPHAN synthase alpha chain|Halobacterium salinarum (strain ATCC 29341

Query: 1 KACVIHGTDL 10
+AC HG DL
Sbjct: 139 EACRAHGLDL 148


>sp|KDGK_THEAC|2-DEHYDRO-3-DEOXYGLUCONOKINASE acidophilum (strain ATCC 25905

Query: 1 KACVIHGTDL 10
KAC GTDL
Sbjct: 58 KACSEAGTDL 67


>sp|TRUB_THEON|PROBABLE tRNA pseudouridine synthase B|Thermococcus onnurineus (strain NA1)

Query: 2 ACVIHGTDL 10
A V HG DL
Sbjct: 261 AAVTHGADL 269


>sp|TRUB_THEKO|PROBABLE tRNA pseudouridine synthase B|Thermococcus kodakarensis (strain

Query: 2 ACVIHGTDL 10
A V HG DL
Sbjct: 261 AAVTHGADL 269


>sp|TRUB_THEGJ|PROBABLE tRNA pseudouridine synthase B|Thermococcus gammatolerans (strain

Query: 2 ACVIHGTDL 10
A V HG DL
Sbjct: 261 AAVTHGADL 269


>sp|TRUB_PYRFU|PROBABLE tRNA pseudouridine synthase B|Pyrococcus furiosus (strain ATCC

Query: 2 ACVIHGTDL 10
A V HG DL
Sbjct: 261 AAVTHGADL 269


>sp|GATD_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrobaculum aerophilum (strain ATCC

Query: 4 VIHGTD 9
V+HGTD
Sbjct: 153 VLHGTD 158


>sp|SYS_METMA|SERINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KACVIHGTDL 10
+ C+I G DL
Sbjct: 39 RECLIEGDDL 48


>sp|SYY_METST|TYROSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 VIHGTD 9
+IHGTD
Sbjct: 202 LIHGTD 207


>sp|AMT2_METJA|AMMONIUM transporter Amt2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CVIHGTDL 10
C+I+GT L
Sbjct: 371 CIIYGTGL 378


>sp|PUR5_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KACVIHG 7
KAC +HG
Sbjct: 234 KACEVHG 240


>sp|PUR5_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KACVIHG 7
KAC +HG
Sbjct: 234 KACEVHG 240


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KACVIHGTDL 10
K C++HG L
Sbjct: 585 KKCLMHGFTL 594


>sp|PUR5_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KACVIHG 7
KAC +HG
Sbjct: 234 KACEVHG 240


>sp|IPK_THEAC|ISOPENTENYL phosphate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 CVIHG 7
CV+HG
Sbjct: 40 CVVHG 44


>sp|Y755_METJA|UNCHARACTERIZED protein MJ0755|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CVIHGTD 9
CV HG D
Sbjct: 135 CVCHGFD 141


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KACVIHGTDL 10
K C++HG L
Sbjct: 590 KKCMMHGFTL 599


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7 /

Query: 3 CVIHGTDL 10
C +H TD+
Sbjct: 384 CNVHNTDI 391


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 3 CVIHGTDL 10
C +H TD+
Sbjct: 384 CNVHNTDI 391


>sp|GATD_HALWD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Haloquadratum walsbyi (strain DSM 16790

Query: 4 VIHGTD 9
V+HGTD
Sbjct: 184 VMHGTD 189




132|Sequence|656|665|HGTDLKDFTS

>sp|KCY_METMJ|CYTIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 HGTDLKDF 8
HG DL DF
Sbjct: 42 HGMDLADF 49


>sp|GATD_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanothermobacter thermautotrophicus

Query: 1 HGTDLKDFTS 10
HGTD +TS
Sbjct: 175 HGTDTMHYTS 184


>sp|SECD_THEGJ|PROTEIN-EXPORT membrane protein SecD|Thermococcus gammatolerans (strain DSM 15229

Query: 1 HGTDLKDF 8
G DLKDF
Sbjct: 285 QGEDLKDF 292


>sp|GATD_NANEQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 HGTDLKDFTS 10
HGTD F+S
Sbjct: 150 HGTDTMHFSS 159


>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 1 HGTDLKDFTS 10
HGTD FT+
Sbjct: 183 HGTDTMAFTA 192


>sp|GATD_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 1 HGTDLKDFTS 10
HGTD FT+
Sbjct: 158 HGTDTMAFTA 167


>sp|GATD_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma volcanium (strain ATCC

Query: 1 HGTDLKDFTS 10
HGTD +TS
Sbjct: 150 HGTDTMSYTS 159


>sp|GATD_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma acidophilum (strain ATCC

Query: 1 HGTDLKDFTS 10
HGTD +TS
Sbjct: 150 HGTDTMAYTS 159


>sp|RS8E_IGNH4|SMALL ribosomal subunit protein eS8|Ignicoccus hospitalis (strain

Query: 1 HGTDLKDFT 9
HG DLK T
Sbjct: 5 HGPDLKKIT 13


>sp|ASPG_THEKO|L-ASPARAGINASE kodakarensis (strain ATCC BAA-918

Query: 1 HGTDLKDFTS 10
HGTD +TS
Sbjct: 83 HGTDTLAYTS 92


>sp|ASPG_PYRFU|L-ASPARAGINASE furiosus (strain ATCC 43587

Query: 1 HGTDLKDFTS 10
HGTD +TS
Sbjct: 81 HGTDTLAYTS 90


>sp|GATD_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Sulfolobus acidocaldarius (strain ATCC

Query: 1 HGTDLKDFTS 10
HGTD +TS
Sbjct: 174 HGTDTMAYTS 183


>sp|IF5A_METTP|TRANSLATION initiation factor 5A|Methanothrix thermoacetophila (strain DSM

Query: 4 DLKDFTS 10
DLKD+T+
Sbjct: 88 DLKDYTT 94


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 3 TDLKDFT 9
TDL DFT
Sbjct: 24 TDLLDFT 30


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 4 DLKDFT 9
DLKDFT
Sbjct: 15 DLKDFT 20


>sp|SYC_METMA|CYSTEINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GTDLKDFT 9
G LKDFT
Sbjct: 82 GMSLKDFT 89


>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GTDLKDFT 9
G LKDFT
Sbjct: 82 GMSLKDFT 89


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 1 HGTDLKD 7
HG DL+D
Sbjct: 221 HGIDLRD 227


>sp|DNAK_HALWD|CHAPERONE protein DnaK|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HGTDLKD 7
HG DL+D
Sbjct: 222 HGIDLRD 228


>sp|SYC_METAC|CYSTEINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GTDLKDFT 9
G LKDFT
Sbjct: 82 GMTLKDFT 89




133|Sequence|661|670|KDFTSEQIDE

>sp|PYRB_METTP|ASPARTATE carbamoyltransferase catalytic subunit|Methanothrix

Query: 1 KDFTSEQIDE 10
KDF+ E+IDE
Sbjct: 11 KDFSREEIDE 20


>sp|NPD1_PYRAE|NAD-DEPENDENT protein deacetylase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DFTSEQIDE 10
DFT++++DE
Sbjct: 4 DFTTDELDE 12


>sp|RRP4_PYRHO|EXOSOME complex component Rrp4|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KDFTSEQID 9
+DFT E+ID
Sbjct: 95 QDFTDEKID 103


>sp|RRP4_PYRAB|EXOSOME complex component Rrp4|Pyrococcus abyssi (strain GE5 /

Query: 1 KDFTSEQID 9
+DFT E+ID
Sbjct: 95 QDFTDEKID 103


>sp|Y819_PYRHO|UNCHARACTERIZED methyltransferase PH0819|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KDFTSEQIDE 10
K FTSEQI +
Sbjct: 408 KHFTSEQISK 417


>sp|PYRB_METMA|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina mazei

Query: 1 KDFTSEQID 9
KDF+ E+ID
Sbjct: 13 KDFSREEID 21


>sp|PYRB_METAC|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina acetivorans

Query: 1 KDFTSEQID 9
KDF+ E+ID
Sbjct: 12 KDFSREEID 20


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 KDFTSEQIDE 10
KD+T E+I+E
Sbjct: 411 KDYTDEEIEE 420


>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii

Query: 1 KDFTSEQIDE 10
KD T E +DE
Sbjct: 31 KDLTEEMVDE 40


>sp|PYRB_METAR|ASPARTATE carbamoyltransferase catalytic subunit|Methanocella arvoryzae

Query: 1 KDFTSEQID 9
KDF+ ++ID
Sbjct: 12 KDFSRDEID 20


>sp|WECC_METVS|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KDFTSEQIDE 10
K F E+IDE
Sbjct: 381 KSFKKEEIDE 390


>sp|RRP4_PYRFU|EXOSOME complex component Rrp4|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KDFTSEQID 9
+D+T E+ID
Sbjct: 95 QDYTDEKID 103


>sp|TOP6A_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 2 DFTSEQIDE 10
DF ++Q+DE
Sbjct: 82 DFLAQQLDE 90


>sp|TOP6A_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 2 DFTSEQIDE 10
DF ++Q+DE
Sbjct: 82 DFLAQQLDE 90


>sp|HMGCS_METS3|HYDROXYMETHYLGLUTARYL-COA synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 FTSEQIDE 10
FTSEQI +
Sbjct: 250 FTSEQIKQ 257




134|Sequence|666|675|EQIDEILQNH

>sp|MTTB_METBU|TRIMETHYLAMINE methyltransferase MttB|Methanococcoides burtonii (strain DSM 6242

Query: 1 EQIDEILQNH 10
E++ EIL+NH
Sbjct: 460 EKVTEILKNH 469


>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QIDEILQNH 10
+ID I+QNH
Sbjct: 79 KIDVIVQNH 87


>sp|PYRB_METTP|ASPARTATE carbamoyltransferase catalytic subunit|Methanothrix

Query: 1 EQIDEILQ 8
E+IDEIL+
Sbjct: 16 EEIDEILE 23


>sp|RTCB_METTH|TRNA-SPLICING ligase RtcB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 QIDEILQN 9
+IDE+L+N
Sbjct: 145 EIDEVLEN 152


>sp|APGM_METLZ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanocorpusculum labreanum (strain ATCC

Query: 2 QIDEILQNH 10
Q EIL+NH
Sbjct: 201 QAAEILKNH 209


>sp|IXTPA_HYPBU|DITP/XTP pyrophosphatase|Hyperthermus butylicus (strain DSM 5456

Query: 1 EQIDEILQN 9
E+I+E+LQ+
Sbjct: 17 EEINEVLQS 25


>sp|MSMJL_METJA|LARGE-CONDUCTANCE mechanosensitive channel MscMJLR|Methanocaldococcus jannaschii

Query: 3 IDEILQN 9
IDEI+QN
Sbjct: 243 IDEIIQN 249


>sp|CDC6Q_HALMA|ORC1-TYPE DNA replication protein 17|Haloarcula marismortui (strain ATCC

Query: 1 EQIDEILQN 9
+QI EILQN
Sbjct: 226 DQIREILQN 234


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 EQIDEILQN 9
E+I+EIL+N
Sbjct: 416 EEIEEILKN 424


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 2 QIDEILQNH 10
++DEI Q H
Sbjct: 580 KLDEIAQRH 588


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EQIDEILQNH 10
EQ DE+L+ +
Sbjct: 1002 EQFDELLKKY 1011


>sp|Y1170_METST|PUTATIVE nickel insertion protein|Methanosphaera stadtmanae (strain ATCC

Query: 1 EQIDEILQNH 10
E++D+I Q H
Sbjct: 79 EKLDDITQKH 88


>sp|CARA_METKA|CARBAMOYL phosphate synthase small chain|Methanopyrus kandleri (strain AV19 /

Query: 3 IDEILQNH 10
+DE LQ+H
Sbjct: 96 LDEFLQDH 103


>sp|DAPA_METMJ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EQIDEILQNH 10
EQ+ ++L NH
Sbjct: 281 EQLRKVLVNH 290


>sp|SYFB_METST|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 IDEILQNH 10
++EIL+NH
Sbjct: 172 LNEILENH 179


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EQIDEILQNH 10
E I EIL++H
Sbjct: 787 ETIREILEDH 796


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 EQIDEILQN 9
E+I+E LQN
Sbjct: 578 EEIEEKLQN 586


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EQIDEILQ 8
E+IDE+L+
Sbjct: 1071 ERIDEVLE 1078


>sp|PURP_METBU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcoides burtonii (strain DSM

Query: 1 EQIDEILQNH 10
+QI EI+ N+
Sbjct: 5 QQISEIISNY 14




135|Sequence|671|680|ILQNHTEIVF

>sp|DTDA_METLZ|D-AMINOACYL-TRNA deacylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ILQNHTEIV 9
ILQNH E V
Sbjct: 111 ILQNHAEFV 119


>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 1 ILQNHTE 7
I+QNH E
Sbjct: 79 IIQNHVE 85


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 1 ILQNHTE 7
I+QNH E
Sbjct: 83 IIQNHVE 89


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 ILQNHTEIVF 10
IL+N+TE V
Sbjct: 736 ILENNTEFVL 745




136|Sequence|676|685|TEIVFARTSP

>sp|RS4_PYRHO|SMALL ribosomal subunit protein uS4|Pyrococcus horikoshii (strain ATCC

Query: 2 EIVFARTSP 10
+I +ARTSP
Sbjct: 151 KITYARTSP 159


>sp|RS4_PYRFU|SMALL ribosomal subunit protein uS4|Pyrococcus furiosus (strain ATCC

Query: 3 IVFARTSP 10
I +ARTSP
Sbjct: 152 ITYARTSP 159


>sp|RS4_PYRAB|SMALL ribosomal subunit protein uS4|Pyrococcus abyssi (strain GE5 /

Query: 3 IVFARTSP 10
I +ARTSP
Sbjct: 152 ITYARTSP 159


>sp|PELO_DESA1|PROTEIN pelota homolog|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 EIVFARTS 9
+IV+ARTS
Sbjct: 34 DIVYARTS 41


>sp|RFCS_METMJ|REPLICATION factor C small subunit|Methanoculleus marisnigri (strain ATCC

Query: 5 FARTSP 10
FARTSP
Sbjct: 93 FARTSP 98


>sp|RFCS_METHJ|REPLICATION factor C small subunit|Methanospirillum hungatei JF-1 (strain

Query: 5 FARTSP 10
FARTSP
Sbjct: 93 FARTSP 98


>sp|METK_METMA|S-ADENOSYLMETHIONINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TEIVFARTSP 10
T+IV R+SP
Sbjct: 65 TQIVAGRSSP 74


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TEIVFARTSP 10
T+IV R+SP
Sbjct: 65 TQIVAGRSSP 74


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TEIVFARTSP 10
T+IV R+SP
Sbjct: 65 TQIVAGRSSP 74




137|Sequence|681|690|ARTSPQQKLI

>sp|Y1113_METJA|PUTATIVE glycosyltransferase MJ1113|Methanocaldococcus jannaschii (strain

Query: 1 ARTSPQQKLI 10
A+ SP++KLI
Sbjct: 87 AKLSPKEKLI 96




138|Sequence|686|695|QQKLIIVEGC

>sp|DHPSL_METJA|7,8-DIHYDROPTERIN-6-METHYL-4-(BETA-D-RIBOFURANOSYL)-AMINOBENZENE-5'-PHOSPHATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QQKLIIVEGC 10
++ LIIV GC
Sbjct: 199 EKGLIIVSGC 208


>sp|THS_METKA|THERMOSOME subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 KLIIVEGC 10
K+I VEGC
Sbjct: 361 KMIFVEGC 368


>sp|KTHY1_SACS2|PROBABLE thymidylate kinase 1|Saccharolobus solfataricus (strain ATCC

Query: 2 QKLIIVEG 9
QKLI +EG
Sbjct: 2 QKLIAIEG 9


>sp|FLPA_META3|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus aeolicus (strain

Query: 1 QQKLIIVEG 9
+QK I++EG
Sbjct: 196 EQKQILIEG 204


>sp|FLPA_METMP|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 1 QQKLIIVEG 9
+QK I++EG
Sbjct: 195 EQKKILIEG 203


>sp|FLPA_METM7|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 1 QQKLIIVEG 9
+QK I++EG
Sbjct: 195 EQKKILIEG 203


>sp|FLPA_METM6|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 1 QQKLIIVEG 9
+QK I++EG
Sbjct: 195 EQKKILIEG 203


>sp|FLPA_METM5|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 1 QQKLIIVEG 9
+QK I++EG
Sbjct: 195 EQKKILIEG 203


>sp|FLPA_METVS|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus vannielii (strain

Query: 1 QQKLIIVEG 9
+QK I++EG
Sbjct: 195 EQKKILIEG 203




139|Sequence|691|700|IVEGCQRQGA

>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IVEGCQRQGA 10
IVEGC R+ A
Sbjct: 125 IVEGCARELA 134


>sp|Y860_PYRFU|UNCHARACTERIZED protein PF0860|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IVEGCQRQ 8
I+EGC R+
Sbjct: 128 IIEGCARE 135


>sp|TAW22_PYRAB|TRNA (guanine(37)-N(1))/4-demethylwyosine(37)-methyltransferase

Query: 1 IVEGCQRQG 9
++E C+RQG
Sbjct: 297 VLEECRRQG 305


>sp|Y1062_PYRAB|UNCHARACTERIZED protein PYRAB10620|Pyrococcus abyssi (strain GE5 /

Query: 1 IVEGCQRQGA 10
I+EGC R+ A
Sbjct: 125 IIEGCARELA 134


>sp|Y994_METTH|PUTATIVE aminohydrolase MTH_994|Methanothermobacter thermautotrophicus

Query: 1 IVEGCQRQG 9
IVE C+R G
Sbjct: 193 IVEECERAG 201


>sp|PELO_KORCO|PROTEIN pelota homolog|Korarchaeum cryptofilum (strain OPF8)

Query: 1 IVEGCQRQGA 10
++EGC+R A
Sbjct: 317 LIEGCERTRA 326


>sp|SYK_NATPD|LYSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IVEGCQRQG 9
++EGC +G
Sbjct: 230 VIEGCGHEG 238


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5

Query: 1 IVEGCQRQG 9
+ EGC++ G
Sbjct: 27 LAEGCRKSG 35


>sp|IF2P_SULAC|PROBABLE translation initiation factor IF-2|Sulfolobus acidocaldarius

Query: 1 IVEGCQRQ 8
IVEG Q+Q
Sbjct: 109 IVEGIQKQ 116




140|Sequence|696|705|QRQGAIVAVT

>sp|MPTE_METTH|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 2 RQGAIVAV 9
RQGA+V V
Sbjct: 114 RQGAVVVV 121


>sp|CCA_PYRIL|CCA-ADDING enzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 1 QRQGAIV 7
QRQGA++
Sbjct: 266 QRQGAVI 272


>sp|PURQ_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanothermobacter thermautotrophicus

Query: 2 RQGAIVAVT 10
R GAI A+T
Sbjct: 57 RAGAIAAIT 65




141|Sequence|701|710|IVAVTGDGVN

>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 IVAVTGDGVN 10
+VA+TGDGVN
Sbjct: 552 LVAMTGDGVN 561


>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 3 AVTGDGV 9
AVTGDGV
Sbjct: 54 AVTGDGV 60


>sp|RSMA_AERPE|PROBABLE ribosomal RNA small subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 IVAVTGDGVN 10
+ +TGDGV+
Sbjct: 103 VAVITGDGVS 112


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IVAVTGDGVN 10
+ A+ GDGVN
Sbjct: 577 VTAMVGDGVN 586


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 1 IVAVTGDGVN 10
+VA GDG+N
Sbjct: 612 VVAFVGDGIN 621


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 IVAVTGDGVN 10
+V +TGDG N
Sbjct: 548 LVGMTGDGTN 557


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 IVAVTGDGVN 10
+V +TGDG N
Sbjct: 548 LVGMTGDGTN 557


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 1 IVAVTGDGVN 10
+VA+ GDG N
Sbjct: 498 MVAMVGDGTN 507


>sp|KDPB_THEAC|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 IVAVTGDGVN 10
+VA+ GDG N
Sbjct: 495 MVAMVGDGTN 504


>sp|PSB_HALMD|PROTEASOME subunit beta|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 IVAVTGDGVN 10
+ VTGDGV+
Sbjct: 217 VATVTGDGVD 226


>sp|PSB2_HALTV|PROTEASOME subunit beta 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 IVAVTGDGVN 10
+ AVTG+GV+
Sbjct: 217 LAAVTGEGVD 226


>sp|KHSE_SULAC|HOMOSERINE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VAVTGDGV 9
V VTGDGV
Sbjct: 42 VLVTGDGV 49


>sp|NADK_THEGJ|NAD kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IVAVTGDG 8
I+A+ GDG
Sbjct: 61 IIAIGGDG 68


>sp|NADK_PYRAB|NAD kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 IVAVTGDG 8
I+A+ GDG
Sbjct: 61 IIAIGGDG 68


>sp|NPD1_ARCFU|NAD-DEPENDENT protein deacylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IVAVTGDGVN 10
+VA+TG GV+
Sbjct: 15 LVALTGAGVS 24


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 1 IVAVTGDGV 9
+ AVTG+G+
Sbjct: 757 VSAVTGEGI 765


>sp|NADK_PYRHO|NAD kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IVAVTGDG 8
IVA+ GDG
Sbjct: 61 IVAIGGDG 68


>sp|ALF1_AERPE|PROBABLE fructose-bisphosphate aldolase class 1|Aeropyrum pernix (strain

Query: 1 IVAVTGDGV 9
+VA+ GDGV
Sbjct: 108 VVALGGDGV 116


>sp|NADK_THESM|NAD kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 IVAVTGDG 8
I+A+ GDG
Sbjct: 61 IIAIGGDG 68


>sp|PSB2_NITMS|PROTEASOME subunit beta 2|Nitrosopumilus maritimus (strain SCM1)

Query: 5 TGDGVN 10
TGDG+N
Sbjct: 182 TGDGIN 187


>sp|PSB2_CENSY|PROTEASOME subunit beta 2|Cenarchaeum symbiosum (strain A)

Query: 5 TGDGVN 10
TGDG+N
Sbjct: 182 TGDGIN 187


>sp|NADK_METPE|NAD kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IVAVTGDG 8
+VA+ GDG
Sbjct: 57 VVAIGGDG 64


>sp|TRPB_METKA|TRYPTOPHAN synthase beta chain|Methanopyrus kandleri (strain AV19 /

Query: 1 IVAVTGDGVN 10
IVA TG G N
Sbjct: 229 IVACTGGGSN 238


>sp|IF2P_THEPD|PROBABLE translation initiation factor IF-2|Thermofilum pendens (strain DSM

Query: 1 IVAVTGDGV 9
+ AVTG+G+
Sbjct: 204 VSAVTGEGI 212


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 1 IVAVTGDGV 9
+ A+TG+GV
Sbjct: 199 VSAITGEGV 207




142|Sequence|706|715|GDGVNDSPAL

>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 GDGVNDSPAL 10
GDGVND+PAL
Sbjct: 557 GDGVNDAPAL 566


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GDGVNDSPAL 10
GDGVND+PAL
Sbjct: 582 GDGVNDAPAL 591


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 1 GDGVNDSPAL 10
GDG+ND+PAL
Sbjct: 617 GDGINDAPAL 626


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 1 GDGVNDSPAL 10
GDG ND+PAL
Sbjct: 503 GDGTNDAPAL 512


>sp|KDPB_THEAC|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 GDGVNDSPAL 10
GDG ND+PAL
Sbjct: 500 GDGTNDAPAL 509


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 GDGVNDSPAL 10
GDG ND+PAL
Sbjct: 553 GDGTNDAPAL 562


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 GDGVNDSPAL 10
GDG ND+PAL
Sbjct: 553 GDGTNDAPAL 562


>sp|PATS_METJA|SOLUBLE P-type ATPase-like phosphatase|Methanocaldococcus jannaschii

Query: 1 GDGVNDSPAL 10
GDG ND PA+
Sbjct: 209 GDGANDVPAM 218


>sp|RLMN_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 2 DGVNDSPAL 10
+GVNDSP +
Sbjct: 271 EGVNDSPEI 279


>sp|MPGP_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 GDGVNDSP 8
GDG ND P
Sbjct: 203 GDGYNDFP 210


>sp|PGP_METKA|PHOSPHOGLYCOLATE phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 1 GDGVNDSPAL 10
GDG ND+P L
Sbjct: 178 GDGDNDAPLL 187


>sp|MPGP_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GDGVNDSP 8
GDG ND P
Sbjct: 203 GDGENDFP 210


>sp|PSA_PYRAB|PROTEASOME subunit alpha|Pyrococcus abyssi (strain GE5 /

Query: 3 GVNDSPAL 10
GVND P L
Sbjct: 142 GVNDKPEL 149


>sp|PSA_THEON|PROTEASOME subunit alpha|Thermococcus onnurineus (strain NA1)

Query: 3 GVNDSPAL 10
GVND P L
Sbjct: 142 GVNDKPEL 149


>sp|NOP10_HALSA|RIBOSOME biogenesis protein Nop10|Halobacterium salinarum (strain ATCC

Query: 1 GDGVNDSPA 9
GD VN +PA
Sbjct: 31 GDAVNSAPA 39


>sp|NOP10_HALS3|RIBOSOME biogenesis protein Nop10|Halobacterium salinarum (strain ATCC

Query: 1 GDGVNDSPA 9
GD VN +PA
Sbjct: 31 GDAVNSAPA 39


>sp|GPMPP_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE/MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GDGVNDSPAL 10
GD +ND P L
Sbjct: 213 GDSLNDLPML 222


>sp|SERB_METJA|PHOSPHOSERINE phosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDGVND 6
GDG ND
Sbjct: 166 GDGAND 171


>sp|SERB_ARCFU|PHOSPHOSERINE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GDGVND 6
GDG ND
Sbjct: 290 GDGAND 295


>sp|CETZ_PYRAB|TUBULIN-LIKE protein CetZ|Pyrococcus abyssi (strain GE5 /

Query: 1 GDGVNDSPAL 10
G GVN +P L
Sbjct: 57 GKGVNANPVL 66


>sp|PSA_PYRFU|PROTEASOME subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GVNDSPAL 10
G+ND P L
Sbjct: 142 GINDRPEL 149


>sp|CETZ_PYRFU|TUBULIN-LIKE protein CetZ|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GDGVNDSPAL 10
G GVN +P L
Sbjct: 57 GKGVNANPVL 66


>sp|ARFB_METTH|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermobacter thermautotrophicus

Query: 2 DGVNDSPAL 10
DGVN P L
Sbjct: 200 DGVNPDPVL 208




143|Sequence|711|720|DSPALKKADI

>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 DSPALKKAD 9
D+PALKKAD
Sbjct: 562 DAPALKKAD 570


>sp|KDPB_THEAC|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 DSPALKKADI 10
D+PAL KAD+
Sbjct: 505 DAPALAKADV 514


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 1 DSPALKKADI 10
D+PAL KAD+
Sbjct: 508 DAPALAKADV 517


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 DSPALKKADI 10
D+PAL KAD+
Sbjct: 558 DAPALAKADV 567


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 DSPALKKADI 10
D+PAL KAD+
Sbjct: 558 DAPALAKADV 567


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DSPALKKADI 10
D+PAL +AD+
Sbjct: 587 DAPALAQADV 596


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 1 DSPALKKADI 10
D+PAL +AD+
Sbjct: 622 DAPALAQADL 631


>sp|ILVC_METTP|KETOL-ACID reductoisomerase (NADP(+))|Methanothrix thermoacetophila (strain

Query: 1 DSPALKKAD 9
DSPA K+A+
Sbjct: 50 DSPAWKRAE 58


>sp|FAEHP_METB6|BIFUNCTIONAL enzyme Fae/Hps|Methanoregula boonei (strain DSM 21154

Query: 1 DSPALKKA 8
D PA+KKA
Sbjct: 320 DIPAMKKA 327




144|Sequence|716|725|KKADIGVAMG

>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 2 KADIGVAMG 10
KAD+G+AM
Sbjct: 514 KADVGLAMN 522


>sp|KDPB_THEAC|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 KADIGVAMG 10
KAD+G+AM
Sbjct: 511 KADVGLAMN 519


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 2 KADIGVAM 9
KAD+G+AM
Sbjct: 564 KADVGLAM 571


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 2 KADIGVAM 9
KAD+G+AM
Sbjct: 564 KADVGLAM 571


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KADIGVAMG 10
+AD+G+A+G
Sbjct: 593 QADVGIAIG 601


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 2 KADIGVAMG 10
+AD+G+A+G
Sbjct: 628 QADLGIAVG 636


>sp|NUSA_HALMO|PROBABLE transcription termination protein NusA|Halococcus morrhuae

Query: 2 KADIGVAMG 10
+AD GVA+G
Sbjct: 106 RADTGVAIG 114


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 2 KADIGVA 8
KADIG+A
Sbjct: 225 KADIGIA 231


>sp|FRHG_METJA|COENZYME F420 hydrogenase subunit gamma|Methanocaldococcus jannaschii

Query: 1 KKADIGVAMG 10
KKA I VA+G
Sbjct: 78 KKAKIVVALG 87


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 1 KKADIGVAM 9
KKADIG+ +
Sbjct: 552 KKADIGLGI 560


>sp|RL7A_PICTO|LARGE ribosomal subunit protein eL8|Picrophilus torridus (strain ATCC

Query: 1 KKADIGVAMG 10
KK+D+G+ +G
Sbjct: 80 KKSDLGLKVG 89


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 KKADIGVAMG 10
KKAD G+A+
Sbjct: 567 KKADCGIAVS 576


>sp|RL7A_THEVO|LARGE ribosomal subunit protein eL8|Thermoplasma volcanium (strain ATCC

Query: 1 KKADIGVAMG 10
KKAD+G +G
Sbjct: 81 KKADLGSKVG 90


>sp|NUSA_METVS|PROBABLE transcription termination protein NusA|Methanococcus vannielii

Query: 1 KKADIGVAMG 10
K+ DIG A+G
Sbjct: 39 KEGDIGAAIG 48




145|Sequence|721|730|GVAMGIAGSD

>sp|G1PDH_PYRCJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GVAMGIAGS 9
GVAMGIAGS
Sbjct: 221 GVAMGIAGS 229


>sp|G1PDH_PYRAE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GVAMGIAGS 9
GVAMGIAGS
Sbjct: 224 GVAMGIAGS 232


>sp|G1PDH_PYRAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GVAMGIAGS 9
GVAMGIAGS
Sbjct: 224 GVAMGIAGS 232


>sp|G1PDH_PYRIL|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GVAMGIAGS 9
GVAMGIAGS
Sbjct: 224 GVAMGIAGS 232


>sp|G1PDH_PYRNV|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GVAMGIAGS 9
GVAMGIAGS
Sbjct: 224 GVAMGIAGS 232


>sp|HIS1_PYRFU|ATP phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVAMGIAGSD 10
G+ +GIAGSD
Sbjct: 57 GIDIGIAGSD 66


>sp|G1PDH_SACI7|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 GVAMGIAGS 9
GVAMG+AGS
Sbjct: 234 GVAMGMAGS 242


>sp|G1PDH_SACI2|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GVAMGIAGS 9
GVAMG+AGS
Sbjct: 234 GVAMGMAGS 242


>sp|G1PDH_SACI1|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 GVAMGIAGS 9
GVAMG+AGS
Sbjct: 234 GVAMGMAGS 242


>sp|G1PDH_SACI6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GVAMGIAGS 9
GVAMG+AGS
Sbjct: 234 GVAMGMAGS 242


>sp|G1PDH_SACI4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GVAMGIAGS 9
GVAMG+AGS
Sbjct: 234 GVAMGMAGS 242


>sp|G1PDH_SACI3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.16.27)

Query: 1 GVAMGIAGS 9
GVAMG+AGS
Sbjct: 234 GVAMGMAGS 242


>sp|G1PDH_SULAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GVAMGIAGS 9
GVAMG+AGS
Sbjct: 234 GVAMGMAGS 242


>sp|HIS1_THEON|ATP phosphoribosyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 GVAMGIAGSD 10
G+ +GIAGSD
Sbjct: 57 GIDVGIAGSD 66


>sp|HIS1_THEKO|ATP phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 GVAMGIAGSD 10
GV +GIAGSD
Sbjct: 55 GVEVGIAGSD 64


>sp|G1PDH_SACS2|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus solfataricus (strain ATCC

Query: 1 GVAMGIAGS 9
GVAMG+AGS
Sbjct: 234 GVAMGMAGS 242


>sp|G1PDH_METS5|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Metallosphaera sedula (strain ATCC 51363

Query: 1 GVAMGIAGS 9
GVAMG+AGS
Sbjct: 234 GVAMGMAGS 242


>sp|G1PDH_SULTO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GVAMGIAGS 9
GVAMG+AGS
Sbjct: 233 GVAMGMAGS 241


>sp|G1PDH_THESM|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus sibiricus (strain DSM 12597

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 234 GVAMSIAGS 242


>sp|G1PDH_KORCO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 194 GVAMSIAGS 202


>sp|G1PDH_METMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 240 GVAMSIAGS 248


>sp|G1PDH_PYRAB|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus abyssi (strain GE5 /

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 230 GVAMSIAGS 238


>sp|G1PDH_PYRFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 230 GVAMSIAGS 238


>sp|G1PDH_METLZ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocorpusculum labreanum (strain ATCC

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 245 GVAMSIAGS 253


>sp|G1PDH_METBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcoides burtonii (strain DSM 6242

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 241 GVAMSIAGS 249


>sp|G1PDH_THEKO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus kodakarensis (strain ATCC

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 235 GVAMSIAGS 243


>sp|G1PDH_METBF|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina barkeri (strain Fusaro /

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 240 GVAMSIAGS 248


>sp|G1PDH_METAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina acetivorans (strain ATCC

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 240 GVAMSIAGS 248


>sp|G1PDH_PYRHO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 230 GVAMSIAGS 238


>sp|G1PDH_CALMQ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Caldivirga maquilingensis (strain ATCC

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 232 GVAMAIAGS 240


>sp|G1PDH_NATPD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 235 GVAMSIAGS 243


>sp|G1PDH_METKA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanopyrus kandleri (strain AV19 /

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 236 GVAMSIAGS 244


>sp|G1PDH_HALWD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 231 GVAMSIAGS 239


>sp|G1PDH_METB6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoregula boonei (strain DSM 21154

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 244 GVAMSIAGS 252


>sp|G1PDH_HALLT|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 231 GVAMSIAGS 239


>sp|G1PDH_METPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosphaerula palustris (strain ATCC

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 244 GVAMAIAGS 252


>sp|G1PDH_METMJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoculleus marisnigri (strain ATCC

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 245 GVAMSIAGS 253


>sp|G1PDH_METTP|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothrix thermoacetophila (strain DSM

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 239 GVAMSIAGS 247


>sp|HIS1_THEGJ|ATP phosphoribosyltransferase|Thermococcus gammatolerans (strain DSM

Query: 1 GVAMGIAGSD 10
GV +GI GSD
Sbjct: 57 GVDVGITGSD 66


>sp|LACC_HALVD|LACCASE volcanii (strain ATCC 29605

Query: 1 GVAMGIAGS 9
G A+GIAG+
Sbjct: 13 GAALGIAGT 21


>sp|G1PDH_IGNH4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 234 GVAMCIAGS 242


>sp|G1PDH_STAMF|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Staphylothermus marinus (strain ATCC 43588

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 238 GVAMCIAGS 246


>sp|G1PDH_HYPBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Hyperthermus butylicus (strain DSM 5456

Query: 1 GVAMGIAGS 9
GVAM IAGS
Sbjct: 232 GVAMCIAGS 240


>sp|G1PDH_METHJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GVAMGIAGS 9
GV+M IAGS
Sbjct: 244 GVSMAIAGS 252


>sp|GLCD2_HALTV|GLUCOSE 1-dehydrogenase 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 2 VAMGIAGSD 10
VA+GI GSD
Sbjct: 33 VAVGIDGSD 41


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GVAMGIAGSD 10
GV +G+AG D
Sbjct: 661 GVKIGVAGGD 670


>sp|IF2P_METLZ|PROBABLE translation initiation factor IF-2|Methanocorpusculum labreanum

Query: 1 GVAMGIAGSD 10
G +GIAGSD
Sbjct: 260 GDEIGIAGSD 269


>sp|G1PDH_METAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocella arvoryzae (strain DSM 22066

Query: 2 VAMGIAGS 9
VAM IAGS
Sbjct: 229 VAMSIAGS 236


>sp|G1PDH_THEPD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermofilum pendens (strain DSM 2475

Query: 1 GVAMGIAGS 9
G+AM +AGS
Sbjct: 228 GMAMAVAGS 236


>sp|PSA_SACS2|PROTEASOME subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GVAMGIAGSD 10
GVA+ IAG D
Sbjct: 135 GVALVIAGID 144


>sp|G1PDH_AERPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Aeropyrum pernix (strain ATCC 700893

Query: 1 GVAMGIAGS 9
GV+M IAGS
Sbjct: 236 GVSMCIAGS 244




146|Sequence|726|735|IAGSDVSKQA

>sp|RL3_METB6|LARGE ribosomal subunit protein uL3|Methanoregula boonei (strain DSM

Query: 1 IAGSDVSKQ 9
+AG D++KQ
Sbjct: 167 VAGGDIAKQ 175


>sp|RPIA_HALMA|RIBOSE-5-PHOSPHATE isomerase A|Haloarcula marismortui (strain ATCC 43049

Query: 3 GSDVSKQA 10
GSD +KQA
Sbjct: 5 GSDAAKQA 12




147|Sequence|731|740|VSKQAADMIL

>sp|AHBC_METBF|FE-COPROPORPHYRIN III synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 SKQAADMIL 10
S+QA D+IL
Sbjct: 233 SRQAVDLIL 241




148|Sequence|736|745|ADMILLDDNF

>sp|NROR_PYRFU|NAD(P)H:RUBREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 ILLDDNF 10
IL+DDNF
Sbjct: 242 ILIDDNF 248


>sp|Y1112_PYRHO|UPF0127 protein PH1112|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DMILLDDNF 10
D+I LD NF
Sbjct: 61 DVIFLDSNF 69


>sp|TRPF_PYRFU|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ADMILLD 7
ADM+LLD
Sbjct: 127 ADMVLLD 133


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 ADMILLDD 8
A M+LLDD
Sbjct: 343 ASMVLLDD 350


>sp|RS3_CENSY|SMALL ribosomal subunit protein uS3|Cenarchaeum symbiosum (strain A)

Query: 1 ADMILLDD 8
AD+I+LDD
Sbjct: 159 ADVIVLDD 166


>sp|SUCD_METJA|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Methanocaldococcus jannaschii

Query: 3 MILLDDN 9
MILLD+N
Sbjct: 7 MILLDEN 13


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 ADMILLDD 8
A M+LLDD
Sbjct: 343 AGMVLLDD 350


>sp|TRPF_PYRAB|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 1 ADMILLD 7
AD+ILLD
Sbjct: 127 ADLILLD 133


>sp|KPYK_AERPE|PYRUVATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ADMILLDD 8
D++LLDD
Sbjct: 112 GDIVLLDD 119


>sp|RRP41_CENSY|EXOSOME complex component Rrp41|Cenarchaeum symbiosum (strain A)

Query: 2 DMILLDDN 9
D++LLD+N
Sbjct: 7 DVVLLDEN 14


>sp|NFI_THEAC|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma acidophilum (strain

Query: 1 ADMILLDDN 9
AD++L+D N
Sbjct: 203 ADLLLIDGN 211


>sp|RRP41_NITMS|EXOSOME complex component Rrp41|Nitrosopumilus maritimus (strain SCM1)

Query: 1 ADMILLDDN 9
A M+L+D+N
Sbjct: 6 ATMVLMDEN 14


>sp|DADD_METS3|5'-DEOXYADENOSINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ADMILLDDN 9
AD+IL+D N
Sbjct: 363 ADLILIDTN 371




149|Sequence|741|750|LDDNFASIVT

>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LDDNFASIV 9
L DNF SIV
Sbjct: 474 LPDNFYSIV 482


>sp|CBIA_METTH|COBYRINATE a,c-diamide synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 LDDNFASIV 9
L+DN AS+V
Sbjct: 267 LEDNAASVV 275


>sp|RL14_THEKO|LARGE ribosomal subunit protein uL14|Thermococcus kodakarensis (strain

Query: 1 LDDNFASIVT 10
+DN A+IVT
Sbjct: 99 FEDNAAAIVT 108


>sp|COBQ_METTH|PROBABLE cobyric acid synthase|Methanothermobacter thermautotrophicus

Query: 1 LDDNFAS 7
LDDNF++
Sbjct: 470 LDDNFSA 476


>sp|MOAA_METVS|PROBABLE GTP 3',8-cyclase|Methanococcus vannielii (strain ATCC 35089

Query: 2 DDNFASIVT 10
DDN +VT
Sbjct: 263 DDNLVDVVT 271


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 DDNFASIV 9
D+NF+SI+
Sbjct: 155 DNNFSSII 162




150|Sequence|746|755|ASIVTGVEEG

>sp|SYR_HALWD|ARGININE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ASIVTGVEEG 10
ASI+ G+E G
Sbjct: 225 ASIINGLEAG 234


>sp|RL6_META3|LARGE ribosomal subunit protein uL6|Methanococcus aeolicus (strain ATCC

Query: 2 SIVTGVEEG 10
+I+TGV EG
Sbjct: 78 NIITGVSEG 86


>sp|RL6_ARCFU|LARGE ribosomal subunit protein uL6|Archaeoglobus fulgidus (strain ATCC

Query: 2 SIVTGVEEG 10
+++TGV+EG
Sbjct: 95 NLITGVKEG 103




151|Sequence|751|760|GVEEGRLIFD

>sp|MPTA_THEAC|GTP cyclohydrolase MptA|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VEEGRLIF 9
VEEGRL++
Sbjct: 215 VEEGRLVY 222


>sp|PHNC_HALSA|PHOSPHONATES import ATP-binding protein PhnC|Halobacterium salinarum (strain

Query: 1 GVEEGRLIFD 10
G+++GR+IFD
Sbjct: 211 GMKDGRVIFD 220


>sp|RL15_THEKO|LARGE ribosomal subunit protein uL15|Thermococcus kodakarensis (strain

Query: 3 EEGRLIFD 10
E+G+L+FD
Sbjct: 97 EDGKLVFD 104


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VEEGRLIFD 10
+E+G++IFD
Sbjct: 113 IEKGKIIFD 121


>sp|FOLD_METBU|BIFUNCTIONAL protein FolD|Methanococcoides burtonii (strain DSM 6242

Query: 2 VEEGRLIFD 10
V+EG +IFD
Sbjct: 225 VKEGSVIFD 233


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 1 GVEEGRLIFD 10
G E+G L+FD
Sbjct: 364 GKEKGALMFD 373


>sp|FOLD_METAC|BIFUNCTIONAL protein FolD|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VEEGRLIFD 10
V+EG +IFD
Sbjct: 229 VKEGTVIFD 237


>sp|FOLD_METBF|BIFUNCTIONAL protein FolD|Methanosarcina barkeri (strain Fusaro /

Query: 2 VEEGRLIFD 10
V+EG +IFD
Sbjct: 226 VKEGAVIFD 234


>sp|FOLD_METMA|BIFUNCTIONAL protein FolD|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VEEGRLIFD 10
V+EG +IFD
Sbjct: 226 VKEGAVIFD 234


>sp|PHNC2_NATPD|PHOSPHONATES import ATP-binding protein PhnC|Natronomonas pharaonis (strain ATCC

Query: 1 GVEEGRLIFD 10
G+ +GR+++D
Sbjct: 218 GLADGRIVYD 227


>sp|PCNA_PYRAB|DNA polymerase sliding clamp|Pyrococcus abyssi (strain GE5 /

Query: 3 EEGRLIF 9
+EGRLIF
Sbjct: 235 DEGRLIF 241


>sp|MFND_METJA|TYRAMINE--L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VEEGRLIFD 10
++EG+++FD
Sbjct: 35 LKEGKMMFD 43




152|Sequence|756|765|RLIFDNLKKS

>sp|CBIJ_METMI|COBALT-PRECORRIN-6A reductase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 RLIFDNLKKS 10
++ +DNLKK+
Sbjct: 52 KMTYDNLKKT 61


>sp|IF5A_METST|TRANSLATION initiation factor 5A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 IFDNLKKS 10
IFDN K+S
Sbjct: 49 IFDNQKRS 56


>sp|IF5A_METTP|TRANSLATION initiation factor 5A|Methanothrix thermoacetophila (strain DSM

Query: 3 IFDNLKKS 10
IFDN K+S
Sbjct: 48 IFDNQKRS 55


>sp|IF5A_METTH|TRANSLATION initiation factor 5A|Methanothermobacter thermautotrophicus

Query: 3 IFDNLKKS 10
IFDN K+S
Sbjct: 49 IFDNQKRS 56


>sp|IF5A_THEVO|TRANSLATION initiation factor 5A|Thermoplasma volcanium (strain ATCC 51530

Query: 3 IFDNLKKS 10
+FDN K+S
Sbjct: 49 VFDNQKRS 56


>sp|IF5A_METS3|TRANSLATION initiation factor 5A|Methanobrevibacter smithii (strain ATCC

Query: 3 IFDNLKKS 10
IFDN K+S
Sbjct: 49 IFDNQKRS 56


>sp|IF5A_THEAC|TRANSLATION initiation factor 5A|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 IFDNLKKS 10
+FDN K+S
Sbjct: 49 VFDNQKRS 56


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LIFDNLKK 9
L+F NLKK
Sbjct: 211 LVFMNLKK 218


>sp|TRM1_THEON|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus onnurineus

Query: 1 RLIFDNLK 8
RLI DN+K
Sbjct: 85 RLIVDNVK 92


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RLIFDNL 7
++IFDNL
Sbjct: 117 KIIFDNL 123




153|Sequence|761|770|NLKKSIAYTL

>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NLKKSIAYT 9
NLKK+I YT
Sbjct: 783 NLKKTIDYT 791


>sp|PURO_METS3|IMP cyclohydrolase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 NLKKSIAYTL 10
N+K +IAY+L
Sbjct: 90 NIKDAIAYSL 99


>sp|DNLI1_THEPD|DNA ligase 1|Thermofilum pendens (strain DSM 2475

Query: 3 KKSIAYT 9
KK++AYT
Sbjct: 346 KKTVAYT 352


>sp|MCH_METVS|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LKKSIAYT 9
LKKS+ YT
Sbjct: 314 LKKSLKYT 321


>sp|CBIL_METJA|PROBABLE cobalt-precorrin-2 C(20)-methyltransferase|Methanocaldococcus

Query: 3 KKSIAYTL 10
KKSIAY +
Sbjct: 44 KKSIAYEI 51




154|Sequence|766|775|IAYTLTSNIP

>sp|PURP_KORCO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 YTLTSNIP 10
YT+T NIP
Sbjct: 258 YTVTGNIP 265


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IAYTLTSNIP 10
I+Y+L +N+P
Sbjct: 210 ISYSLAANLP 219


>sp|PURP_PYRFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IAYTLTSNIP 10
I YT+ NIP
Sbjct: 225 ITYTVIGNIP 234


>sp|PURP_PYRAB|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 IAYTLTSNIP 10
I YT+ NIP
Sbjct: 228 ITYTVIGNIP 237


>sp|PURP_PYRHO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus horikoshii (strain ATCC

Query: 1 IAYTLTSNIP 10
+ YT+ NIP
Sbjct: 224 VTYTVVGNIP 233


>sp|GUAAB_THEKO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermococcus

Query: 1 IAYTLTSNIP 10
IA+ +TS IP
Sbjct: 278 IAFRITSEIP 287


>sp|GUAAB_PYRHO|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus horikoshii

Query: 1 IAYTLTSNIP 10
IA+ +TS IP
Sbjct: 279 IAFRITSEIP 288


>sp|GUAAB_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus furiosus

Query: 1 IAYTLTSNIP 10
IA+ +TS IP
Sbjct: 284 IAFRITSEIP 293


>sp|GUAAB_PYRAB|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus abyssi

Query: 1 IAYTLTSNIP 10
IA+ +TS IP
Sbjct: 279 IAFRITSEIP 288


>sp|PURP2_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 2|Methanosarcina mazei (strain ATCC

Query: 3 YTLTSNIP 10
Y LT N+P
Sbjct: 250 YVLTGNVP 257


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 1 IAYTLTSNIP 10
I Y TSN+P
Sbjct: 286 IVYANTSNMP 295


>sp|PYLC_METMA|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IAYTLTSNIP 10
++Y+L +N+P
Sbjct: 218 LSYSLAANLP 227


>sp|PURP_THEKO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Thermococcus kodakarensis (strain ATCC

Query: 3 YTLTSNIP 10
YT+ NIP
Sbjct: 224 YTVVGNIP 231


>sp|RL30E_SULTO|LARGE ribosomal subunit protein eL30|Sulfurisphaera tokodaii (strain

Query: 1 IAYTLTSNIP 10
+AY SNIP
Sbjct: 54 LAYAKISNIP 63


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 5 LTSNIP 10
LTSNIP
Sbjct: 268 LTSNIP 273


>sp|Y601_METMP|PROBABLE minor pilin MMP0601|Methanococcus maripaludis (strain DSM 14266

Query: 4 TLTSNIP 10
T+TSNIP
Sbjct: 248 TITSNIP 254


>sp|SECF_THEGJ|PROTEIN-EXPORT membrane protein SecF|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IAYTLTSNI 9
I YT+ SNI
Sbjct: 215 IGYTVDSNI 223




155|Sequence|771|780|TSNIPEITPF

>sp|Y1033_PYRAR|UPF0210 protein Pars_1033|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 TSNIPEITPF 10
TSN+PE PF
Sbjct: 185 TSNLPEDVPF 194


>sp|Y3581_PYRAE|UPF0210 protein PAE3581|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TSNIPEITPF 10
T+N+PE PF
Sbjct: 185 TANLPEDVPF 194


>sp|SYC_METVS|CYSTEINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TSNIPEITPF 10
T NIPEI F
Sbjct: 115 TENIPEIISF 124


>sp|Y1214_METKA|UPF0210 protein MK1214|Methanopyrus kandleri (strain AV19 /

Query: 2 SNIPEITPF 10
+N PE TPF
Sbjct: 194 TNAPENTPF 202


>sp|APGM_METVS|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC 35089

Query: 4 IPEITPF 10
+PEI PF
Sbjct: 226 VPEIIPF 232


>sp|APGM_METM7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C7 /

Query: 4 IPEITPF 10
+PEI PF
Sbjct: 226 VPEIMPF 232


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SNIPEITP 9
SNI E+TP
Sbjct: 341 SNIDELTP 348


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TSNIPEITPF 10
T IPE PF
Sbjct: 359 TPKIPETKPF 368


>sp|HELS_PYRFU|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus furiosus (strain ATCC 43587

Query: 5 PEITPF 10
P+ITPF
Sbjct: 523 PDITPF 528


>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 1 TSNIPEIT 8
TS IPE+T
Sbjct: 481 TSEIPEVT 488


>sp|RL2_ARCFU|LARGE ribosomal subunit protein uL2|Archaeoglobus fulgidus (strain ATCC

Query: 3 NIPEITP 9
NIPE TP
Sbjct: 98 NIPEGTP 104


>sp|Y2205_ARCFU|UNCHARACTERIZED protein AF_2205|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SNIPEITPF 10
SN+P I P+
Sbjct: 398 SNVPGIAPY 406


>sp|SYH_HALWD|HISTIDINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 IPEITP 9
IPE+TP
Sbjct: 75 IPELTP 80


>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SNIPEITPF 10
SN+P +PF
Sbjct: 184 SNVPPDSPF 192


>sp|RUBR1_METJA|PROBABLE Rubredoxin-1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TSNIPEITPF 10
+ NIP TPF
Sbjct: 39 SQNIPPKTPF 48


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TSNIPEITPF 10
T +PE+ PF
Sbjct: 517 TMELPELYPF 526


>sp|AROA_METST|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 TSNIPEITPF 10
T+NIPE + +
Sbjct: 217 TTNIPEYSSY 226


>sp|SPT5_ACIAM|TRANSCRIPTION elongation factor Spt5|Acidianus ambivalens (Desulfurolobus

Query: 1 TSNIPEI 7
T+NIPEI
Sbjct: 31 TNNIPEI 37


>sp|Y759_PYRIL|UPF0210 protein Pisl_0759|Pyrobaculum islandicum (strain DSM 4184

Query: 3 NIPEITPF 10
N+PE PF
Sbjct: 187 NMPEDVPF 194




156|Sequence|776|785|EITPFLLFIM

>sp|NEP1_PYRHO|RIBOSOMAL RNA small subunit methyltransferase|Pyrococcus horikoshii (strain

Query: 1 EITPFLLFIM 10
EI P ++FIM
Sbjct: 147 EINPDVVFIM 156




157|Sequence|781|790|LLFIMANIPL

>sp|MT51_METJA|PUTATIVE type II methyltransferase M.MJ0563P|Methanocaldococcus jannaschii

Query: 1 LLFIMANIP 9
L+F+M N+P
Sbjct: 121 LIFVMENVP 129


>sp|PRIS_SULAC|DNA primase small subunit PriS|Sulfolobus acidocaldarius (strain ATCC

Query: 3 FIMANIPL 10
FI++N+PL
Sbjct: 63 FILSNVPL 70


>sp|COFC_METMS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 1 LLFIMANIPL 10
+L IMA++PL
Sbjct: 88 ILIIMADLPL 97


>sp|COFC_METPS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella paludicola (strain DSM 17711

Query: 1 LLFIMANIPL 10
++ IMA+IPL
Sbjct: 83 VMIIMADIPL 92


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 FIMANIPL 10
F+MAN PL
Sbjct: 356 FLMANAPL 363


>sp|COFC_METBU|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LLFIMANIPL 10
+L IMA++PL
Sbjct: 88 ILIIMADLPL 97


>sp|HTR8_HALS3|TRANSDUCER protein Htr8|Halobacterium salinarum (strain ATCC 29341

Query: 2 LFIMANIPL 10
+F++A+IPL
Sbjct: 48 VFVLAHIPL 56


>sp|SECY_AERPE|PROTEIN translocase subunit SecY|Aeropyrum pernix (strain ATCC 700893

Query: 1 LLFIMANIPL 10
L FIM+NIPL
Sbjct: 39 LYFIMSNIPL 48


>sp|COFC_METTP|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LLFIMANIPL 10
+L +MA++PL
Sbjct: 97 ILIVMADLPL 106


>sp|EF1A_THESM|ELONGATION factor 1-alpha|Thermococcus sibiricus (strain DSM 12597

Query: 1 LLFIMANIP 9
LLF ANIP
Sbjct: 27 LLFDTANIP 35


>sp|EF1A_THEKO|ELONGATION factor 1-alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LLFIMANIP 9
LLF ANIP
Sbjct: 27 LLFDTANIP 35


>sp|EF1A_THEGJ|ELONGATION factor 1-alpha|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LLFIMANIP 9
LLF ANIP
Sbjct: 27 LLFDTANIP 35


>sp|EF1A_THEON|ELONGATION factor 1-alpha|Thermococcus onnurineus (strain NA1)

Query: 1 LLFIMANIP 9
LLF ANIP
Sbjct: 27 LLFDTANIP 35


>sp|COFC_METMA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LLFIMANIPL 10
+L +MA++PL
Sbjct: 88 VLIVMADLPL 97


>sp|COFC_METAR|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LLFIMANIPL 10
++ +MA+IPL
Sbjct: 84 VMIVMADIPL 93


>sp|MTM7_METJA|PUTATIVE type II methyltransferase M.MjaORF1200P|Methanocaldococcus

Query: 2 LFIMANIP 9
+F+M N+P
Sbjct: 174 IFVMENVP 181


>sp|LEUC1_ARCFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Archaeoglobus fulgidus (strain ATCC

Query: 3 FIMANIPL 10
F+MANI L
Sbjct: 23 FVMANIDL 30


>sp|EF1A_THECE|ELONGATION factor 1-alpha|Thermococcus celer

Query: 1 LLFIMANIP 9
LLF ANIP
Sbjct: 27 LLFDTANIP 35


>sp|COFC_METAC|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LLFIMANIPL 10
+L +MA++PL
Sbjct: 88 VLIVMADLPL 97


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 FIMANIPL 10
++M N+PL
Sbjct: 644 YVMMNVPL 651


>sp|SECY_ARCFU|PROTEIN translocase subunit SecY|Archaeoglobus fulgidus (strain ATCC

Query: 1 LLFIMANIPL 10
L FI++N+P+
Sbjct: 40 LYFILSNVPV 49


>sp|COFC_METB6|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 LLFIMANIPL 10
+L +MA++PL
Sbjct: 86 VLILMADLPL 95




158|Sequence|786|795|ANIPLPLGTI

>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 PLPLGTI 10
PLPLGT+
Sbjct: 117 PLPLGTV 123


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 2 NIPLPLGTI 10
N P+PLG +
Sbjct: 131 NFPIPLGNV 139


>sp|ENO_HALSA|ENOLASE salinarum (strain ATCC 700922

Query: 2 NIPLPLGTI 10
N P+PLG +
Sbjct: 132 NFPVPLGNV 140


>sp|ENO_HALS3|ENOLASE salinarum (strain ATCC 29341

Query: 2 NIPLPLGTI 10
N P+PLG +
Sbjct: 132 NFPVPLGNV 140


>sp|ENO_PYRAE|ENOLASE aerophilum (strain ATCC 51768

Query: 3 IPLPLGTI 10
+PLPLG +
Sbjct: 138 LPLPLGNV 145


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 NIPLPLGTI 10
N P+P+GT+
Sbjct: 114 NSPVPVGTV 122


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 NIPLPLGTI 10
N P+P+GT+
Sbjct: 114 NSPVPVGTV 122


>sp|SYDND_METBF|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ANIPLPLGT 9
AN PLP+ T
Sbjct: 107 ANSPLPMDT 115


>sp|RPO1C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanothermobacter thermautotrophicus

Query: 4 PLPLGT 9
P+PLGT
Sbjct: 435 PIPLGT 440


>sp|RPO1C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanothermobacter thermautotrophicus

Query: 4 PLPLGT 9
P+PLGT
Sbjct: 435 PIPLGT 440


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus (strain

Query: 2 NIPLPLGT 9
NIP+P G+
Sbjct: 205 NIPMPRGS 212


>sp|DADD_METM5|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C5 /

Query: 2 NIPLPLGT 9
NIP+ LGT
Sbjct: 286 NIPVTLGT 293


>sp|IDI2_PYRAB|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus abyssi (strain GE5 /

Query: 2 NIPLPLGT 9
NIPL LG+
Sbjct: 92 NIPLGLGS 99


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 PLPLGTI 10
P+P+GT+
Sbjct: 115 PVPVGTV 121


>sp|DADD_METMP|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain DSM 14266

Query: 2 NIPLPLGT 9
NIP+ LGT
Sbjct: 286 NIPVTLGT 293


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 ANIPLPL 7
ANIP PL
Sbjct: 483 ANIPWPL 489


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 PLPLGTI 10
P+P+GT+
Sbjct: 116 PVPVGTV 122


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 NIPLPLGTI 10
N LP+GT+
Sbjct: 112 NTTLPVGTV 120


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 2 NIPLPLGTI 10
N LP+GT+
Sbjct: 112 NTNLPIGTV 120


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 NIPLPLGTI 10
N LP+GT+
Sbjct: 112 NTNLPIGTV 120


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 NIPLPLGTI 10
N LP+GT+
Sbjct: 112 NTNLPIGTV 120


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 NIPLPLGTI 10
N LP+GT+
Sbjct: 112 NTNLPIGTV 120


>sp|Y1509_METJA|UNCHARACTERIZED protein MJ1509|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NIPLPLGTI 10
N+PL GTI
Sbjct: 111 NLPLITGTI 119


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 NIPLPLGTI 10
N LP+GT+
Sbjct: 112 NTNLPIGTV 120


>sp|METK_PYRCJ|S-ADENOSYLMETHIONINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ANIPLPLGTI 10
+ +PLGTI
Sbjct: 99 GTVKIPLGTI 108


>sp|DADD_METM7|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C7 /

Query: 2 NIPLPLGT 9
N+P+ LGT
Sbjct: 286 NVPVTLGT 293


>sp|PIMT_KORCO|PROTEIN-L-ISOASPARTATE O-methyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 NIPLPLG 8
+IPLP+G
Sbjct: 45 DIPLPIG 51




159|Sequence|791|800|PLGTITILCI

>sp|PTH_PYRFU|PEPTIDYL-TRNA hydrolase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PLGTITILCI 10
P GTIT+L I
Sbjct: 92 PPGTITVLAI 101


>sp|PTH_PYRAB|PEPTIDYL-TRNA hydrolase|Pyrococcus abyssi (strain GE5 /

Query: 1 PLGTITILCI 10
P GTIT+L I
Sbjct: 91 PPGTITVLAI 100


>sp|OGT_SULAC|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PLGTITI 7
PLGTIT+
Sbjct: 10 PLGTITV 16


>sp|PTH_THEKO|PEPTIDYL-TRNA hydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PLGTITILCI 10
P GT+T+L I
Sbjct: 91 PPGTVTVLAI 100


>sp|PTH_METAC|PEPTIDYL-TRNA hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PLGTITILCI 10
P GT+T+L I
Sbjct: 88 PAGTVTVLGI 97


>sp|PTH_PYRHO|PEPTIDYL-TRNA hydrolase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PLGTITILCI 10
P GT+T+L +
Sbjct: 94 PPGTVTVLAV 103


>sp|Y1346_THEON|UPF0201 protein TON_1346|Thermococcus onnurineus (strain NA1)

Query: 1 PLGTITIL 8
PLG ITI+
Sbjct: 104 PLGPITII 111


>sp|Y1335_THEKO|UPF0201 protein TK1335|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PLGTITIL 8
PLG ITI+
Sbjct: 107 PLGPITII 114


>sp|Y1297_PYRFU|UPF0201 protein PF1297|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PLGTITIL 8
PLG ITI+
Sbjct: 109 PLGPITII 116


>sp|PTH_METMA|PEPTIDYL-TRNA hydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PLGTITILCI 10
P GT+T+L I
Sbjct: 88 PPGTVTVLGI 97


>sp|PTH_METBF|PEPTIDYL-TRNA hydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PLGTITILCI 10
P GT+T+L I
Sbjct: 88 PPGTVTVLGI 97


>sp|PTH_METTH|PEPTIDYL-TRNA hydrolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PLGTITILCI 10
P GTIT L I
Sbjct: 85 PAGTITCLGI 94




160|Sequence|796|805|TILCIDLGTD

>sp|PTH_NANEQ|PEPTIDYL-TRNA hydrolase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 TILCIDLGTD 10
TI+CI LG D
Sbjct: 91 TIICIALGPD 100


>sp|PTH_THEAC|PEPTIDYL-TRNA hydrolase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TILCIDLGTD 10
TI CI LG D
Sbjct: 93 TITCIGLGPD 102


>sp|GVPD_HALMT|PROTEIN GvpD|Haloferax mediterranei (strain ATCC 33500

Query: 1 TILCIDLGTD 10
+++ +DLGTD
Sbjct: 281 SVIHLDLGTD 290


>sp|PTH_THEVO|PEPTIDYL-TRNA hydrolase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TILCIDLGTD 10
T+ CI LG D
Sbjct: 93 TVTCIGLGPD 102


>sp|CARA_THEVO|CARBAMOYL phosphate synthase small chain|Thermoplasma volcanium (strain ATCC

Query: 1 TILCIDLGT 9
T+L IDLG+
Sbjct: 168 TVLFIDLGS 176


>sp|PCNA_METAR|DNA polymerase sliding clamp|Methanocella arvoryzae (strain DSM 22066

Query: 5 IDLGTD 10
IDLGTD
Sbjct: 214 IDLGTD 219


>sp|PTH_HALWD|PEPTIDYL-TRNA hydrolase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 TILCIDLGTD 10
T+ CI +G D
Sbjct: 88 TVTCIAIGPD 97


>sp|DNAK_METTH|CHAPERONE protein DnaK|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ILCIDLGT 9
IL IDLGT
Sbjct: 7 ILGIDLGT 14


>sp|DNAK_METAR|CHAPERONE protein DnaK|Methanocella arvoryzae (strain DSM 22066

Query: 2 ILCIDLGT 9
IL IDLGT
Sbjct: 4 ILGIDLGT 11


>sp|Y748_ARCFU|UNCHARACTERIZED protein AF_0748|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ILCIDLGT 9
+LCI +GT
Sbjct: 97 LLCIGIGT 104




161|Sequence|801|810|DLGTDMVPAI

>sp|COBQ_PYRFU|PROBABLE cobyric acid synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DLGTDMVP 8
DLG D+VP
Sbjct: 29 DLGYDVVP 36


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LGTDMVPAI 10
+G DMVPA+
Sbjct: 231 IGMDMVPAM 239


>sp|TNAA_HALSA|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DLGTDMVPAI 10
D+G D VP +
Sbjct: 165 DVGADAVPVV 174


>sp|TNAA_HALS3|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DLGTDMVPAI 10
D+G D VP +
Sbjct: 165 DVGADAVPVV 174




162|Sequence|806|815|MVPAISLAYE

***** No hits found ******


163|Sequence|811|820|SLAYEAAESD

>sp|FLUC2_HALSA|FLUORIDE-SPECIFIC ion channel FluC 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 SLAYEAAESD 10
+LAYEAA +D
Sbjct: 52 ALAYEAAATD 61


>sp|RL10_METMA|LARGE ribosomal subunit protein uL10|Methanosarcina mazei (strain ATCC

Query: 1 SLAYEAAESD 10
S+A EAAE D
Sbjct: 279 SVASEAAEKD 288




164|Sequence|816|825|AAESDIMKRQ

>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus

Query: 2 AESDIMKR 9
AESDI++R
Sbjct: 29 AESDILRR 36




165|Sequence|821|830|IMKRQPRNPR

>sp|Y065_METJA|UNCHARACTERIZED protein MJ0065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IMKRQPRNPR 10
I++R P NP+
Sbjct: 226 ILRRHPTNPK 235


>sp|Y1318_METJA|UNCHARACTERIZED protein MJ1318|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IMKRQPRNP 9
IMK P NP
Sbjct: 213 IMKEYPENP 221


>sp|SYN_THEVO|ASPARAGINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 MKRQPRNP 9
MK++PR+P
Sbjct: 76 MKKEPRSP 83


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IMKRQPRNP 9
++KR P NP
Sbjct: 147 LLKRDPHNP 155


>sp|Y300_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0300|Methanocaldococcus

Query: 1 IMKRQPRNP 9
+ R+P+NP
Sbjct: 275 VKSRRPKNP 283


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 2 MKRQPRNP 9
+KRQ RNP
Sbjct: 271 VKRQKRNP 278


>sp|Y151_ARCFU|UNCHARACTERIZED protein AF_0151|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IMKRQPRNP 9
I + QPRNP
Sbjct: 90 IGQNQPRNP 98




166|Sequence|826|835|PRNPRTDKLV

>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PRNPRTDKLV 10
P NP DK++
Sbjct: 258 PVNPNADKIL 267


>sp|HPCAL_NITMS|3-HYDROXYPROPIONATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PRNPRTDKL 9
P NP+ DK+
Sbjct: 289 PINPKADKI 297


>sp|Y916_METST|UPF0425 pyridoxal phosphate-dependent protein Msp_0916|Methanosphaera

Query: 1 PRNPRTDKLV 10
P PRT KLV
Sbjct: 111 PSIPRTAKLV 120


>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 2 RNPRTDK 8
++PRTDK
Sbjct: 279 KDPRTDK 285




167|Sequence|831|840|TDKLVNERLI

***** No hits found ******


168|Sequence|836|845|NERLISMAYG

>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 1 NERLISMAYG 10
+E L+S AYG
Sbjct: 487 SEHLVSAAYG 496


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 ERLISMAYG 10
ER+IS YG
Sbjct: 387 ERMISHRYG 395


>sp|HMGCS_METJA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ERLISMAYG 10
ER+++++YG
Sbjct: 287 ERILAVSYG 295




169|Sequence|841|850|SMAYGQIGMI

>sp|Y1717_ARCFU|UNCHARACTERIZED protein AF_1717|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SMAYGQIGMI 10
SM Y Q+GM+
Sbjct: 102 SMVYEQMGMM 111


>sp|ARFB_METV3|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus voltae (strain ATCC

Query: 4 YGQIGMI 10
YG+IGM+
Sbjct: 201 YGEIGMV 207


>sp|PYRC_SULTO|DIHYDROOROTASE tokodaii (strain DSM 16993

Query: 3 AYGQIGMI 10
AYG IG+I
Sbjct: 73 AYGGIGLI 80


>sp|ARFB_METMP|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain DSM

Query: 4 YGQIGMI 10
YG+IGM+
Sbjct: 165 YGEIGMV 171


>sp|GLME_HALSA|GLUTAMATE mutase epsilon subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 SMAYGQIG 8
++ YGQ+G
Sbjct: 245 TLGYGQVG 252


>sp|GLME_HALMA|GLUTAMATE mutase epsilon subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 SMAYGQIG 8
++ YGQ+G
Sbjct: 245 TLGYGQVG 252


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SMAYGQIGMI 10
++ YGQIG +
Sbjct: 218 AVNYGQIGAV 227


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 MAYGQIGMI 10
+AYG+IG +
Sbjct: 27 VAYGEIGEV 35




170|Sequence|846|855|QIGMIQALGG

>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 IGMIQALGG 10
+ MIQ +GG
Sbjct: 292 VAMIQKMGG 300


>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGMIQALG 9
+G+IQA+G
Sbjct: 11 VGLIQAVG 18


>sp|LYEL_HALSA|LYCOPENE elongase/hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 2 IGMIQALGG 10
+GM+ LGG
Sbjct: 260 VGMVFTLGG 268


>sp|Y2141_ARCFU|UNCHARACTERIZED protein AF_2141|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GMIQALGG 10
G+IQ LGG
Sbjct: 45 GIIQLLGG 52




171|Sequence|851|860|QALGGFFSYF

>sp|COAD_METBF|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ALGGFFSYF 10
A+GG F YF
Sbjct: 5 AVGGTFQYF 13


>sp|TRUA_METTH|TRNA pseudouridine synthase A|Methanothermobacter thermautotrophicus

Query: 1 QALGGFFSYF 10
ALG F S+F
Sbjct: 60 HALGNFVSFF 69


>sp|PANE_PYRAE|2-DEHYDROPANTOATE 2-reductase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ALGGFFSYF 10
A+G F+YF
Sbjct: 9 AVGSLFTYF 17


>sp|MVK_THEON|MEVALONATE kinase|Thermococcus onnurineus (strain NA1)

Query: 2 ALGGFFSY 9
A+GGF Y
Sbjct: 166 AIGGFLHY 173


>sp|SYFB_METTH|PHENYLALANINE--TRNA ligase beta subunit|Methanothermobacter thermautotrophicus (strain

Query: 2 ALGGFF 7
A+GGFF
Sbjct: 519 AIGGFF 524


>sp|MVK_THEGJ|MEVALONATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 ALGGFFSY 9
A+GGF Y
Sbjct: 166 AIGGFIHY 173


>sp|MVK_THEKO|MEVALONATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ALGGFFSY 9
A+GGF Y
Sbjct: 169 AIGGFIHY 176


>sp|Y374_METJA|UNCHARACTERIZED protein MJ0374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QALGGFFSYF 10
LGG F YF
Sbjct: 65 TTLGGLFGYF 74




172|Sequence|856|865|FFSYFVILAE

>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FFSYFVILAE 10
FF+Y++++ +
Sbjct: 271 FFAYYMVMVK 280


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FFSYFVILAE 10
FF+Y++++ +
Sbjct: 271 FFAYYMVMVK 280




173|Sequence|861|870|VILAENGFLP

>sp|DAPAT_METS3|LL-DIAMINOPIMELATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 AENGFLP 10
AENGF+P
Sbjct: 165 AENGFVP 171


>sp|ARGB_ARCFU|ACETYLGLUTAMATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ILAENGFLP 10
IL +NGF+P
Sbjct: 162 ILLDNGFIP 170


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 3 LAENGFLP 10
LAENG+ P
Sbjct: 432 LAENGYSP 439


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 3 LAENGFLP 10
LAENG+ P
Sbjct: 432 LAENGYSP 439


>sp|GSA_SACI7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VILAENGFL 9
VIL E GFL
Sbjct: 215 VILPEKGFL 223


>sp|GSA_SACI6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VILAENGFL 9
VIL E GFL
Sbjct: 215 VILPEKGFL 223


>sp|GSA_SACI4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VILAENGFL 9
VIL E GFL
Sbjct: 215 VILPEKGFL 223


>sp|GSA_SACI3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.27)

Query: 1 VILAENGFL 9
VIL E GFL
Sbjct: 215 VILPEKGFL 223


>sp|GSA_SACI2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VILAENGFL 9
VIL E GFL
Sbjct: 215 VILPEKGFL 223


>sp|GSA_SACI1|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VILAENGFL 9
VIL E GFL
Sbjct: 215 VILPEKGFL 223


>sp|SYTC_SULTO|THREONINE--TRNA ligase catalytic subunit|Sulfurisphaera tokodaii (strain DSM

Query: 3 LAENGFLP 10
LA NGF P
Sbjct: 19 LASNGFKP 26


>sp|ARGB_METBF|ACETYLGLUTAMATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ILAENGFLP 10
I+ ENG++P
Sbjct: 188 IVLENGYIP 196


>sp|GLYA_STAMF|SERINE hydroxymethyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 3 LAENGF 8
LAENGF
Sbjct: 302 LAENGF 307


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 5 ENGFLP 10
+NGFLP
Sbjct: 577 KNGFLP 582


>sp|ASSY_HYPBU|ARGININOSUCCINATE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 2 ILAENGFLP 10
IL NGF P
Sbjct: 155 ILRRNGFQP 163


>sp|PURQ_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanothrix thermoacetophila (strain DSM

Query: 2 ILAENGFLP 10
IL E+G LP
Sbjct: 92 ILVESGILP 100


>sp|AROB_PYRNV|3-DEHYDROQUINATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VILAENGFLP 10
V+LAE G P
Sbjct: 31 VVLAEEGLRP 40


>sp|AROB_PYRIL|3-DEHYDROQUINATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VILAENGFLP 10
V+LAE G P
Sbjct: 31 VVLAEEGLRP 40


>sp|ARGB_METJA|ACETYLGLUTAMATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ILAENGFLP 10
IL NG++P
Sbjct: 171 ILINNGYIP 179


>sp|PYLC_METMA|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VILAENGFL 9
++LAENG L
Sbjct: 297 LMLAENGVL 305




174|Sequence|866|875|NGFLPGNLVG

>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 NGFLPGN 7
NGFL GN
Sbjct: 905 NGFLTGN 911


>sp|Y672_PYRHO|UPF0252 protein PH0672|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GFLPGNL 8
GF PGN+
Sbjct: 202 GFYPGNI 208


>sp|Y136_METHJ|UPF0280 protein Mhun_0136|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GFLPGNLV 9
GF PG L+
Sbjct: 237 GFFPGTLI 244


>sp|Y938_METJA|UPF0014 membrane protein MJ0938|Methanocaldococcus jannaschii (strain ATCC

Query: 3 FLPGNLVG 10
F+PG +VG
Sbjct: 199 FIPGAMVG 206


>sp|IPYR_AERPE|INORGANIC pyrophosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GFLPGNL 8
GF+PG L
Sbjct: 57 GFIPGTL 63


>sp|RL10_METTH|LARGE ribosomal subunit protein uL10|Methanothermobacter

Query: 2 GFLPGNLVG 10
GF PG ++G
Sbjct: 127 GFAPGPILG 135


>sp|SPT5_THEKO|TRANSCRIPTION elongation factor Spt5|Thermococcus kodakarensis (strain ATCC

Query: 1 NGFLPGNLV 9
+GF PG++V
Sbjct: 91 SGFEPGDIV 99


>sp|IF2G_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 4 LPGNLVG 10
LPG L+G
Sbjct: 287 LPGGLIG 293


>sp|IPYR_SULAC|INORGANIC pyrophosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GFLPGNL 8
GF+PG L
Sbjct: 53 GFIPGTL 59


>sp|IPYR_SULTO|INORGANIC pyrophosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GFLPGNL 8
GF+PG L
Sbjct: 53 GFIPGTL 59




175|Sequence|871|880|GNLVGIRLNW

>sp|FMDC_METTM|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 1 GNLVGIRLN 9
GN GIR+N
Sbjct: 174 GNFCGIRMN 182


>sp|FMDC_METTH|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 1 GNLVGIRLN 9
GN GIR+N
Sbjct: 174 GNFCGIRMN 182


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 5 GIRLNW 10
G+RLNW
Sbjct: 253 GLRLNW 258


>sp|FMDC_METWO|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 1 GNLVGIRLN 9
GN GIR+N
Sbjct: 174 GNFCGIRMN 182


>sp|AROA_METHJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 4 VGIRLNW 10
+G+RL+W
Sbjct: 59 LGVRLDW 65


>sp|OTC_METMJ|ORNITHINE carbamoyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GNLVGIRLNW 10
G+L G++L W
Sbjct: 146 GDLHGLKLAW 155


>sp|ARLY_METTH|ARGININOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GNLVGIRLN 9
G L+GIR+N
Sbjct: 342 GMLLGIRVN 350


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 4 VGIRLNW 10
VG+++NW
Sbjct: 37 VGLQINW 43


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 1 GNLVGIRLNW 10
G LVGI +W
Sbjct: 429 GKLVGIITSW 438


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 1 GNLVGIRLNW 10
GNL G R+N+
Sbjct: 317 GNLSGKRVNF 326


>sp|MFNA_PYRAB|PROBABLE L-aspartate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 GNLVGIRLNW 10
G ++G++L W
Sbjct: 130 GEMLGVKLVW 139


>sp|MFNA_PYRHO|L-ASPARTATE/L-GLUTAMATE decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GNLVGIRLNW 10
G ++G++L W
Sbjct: 129 GEMLGVKLVW 138


>sp|MFNA_PYRFU|PROBABLE L-aspartate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GNLVGIRLNW 10
G ++G++L W
Sbjct: 129 GEMLGVKLIW 138


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 4 VGIRLNW 10
VG RL W
Sbjct: 391 VGFRLEW 397


>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GNLVGIRLN 9
G+L+GI LN
Sbjct: 441 GDLLGIPLN 449


>sp|Y1120_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1120|Methanocaldococcus

Query: 2 NLVGIRLN 9
NLVGIR +
Sbjct: 179 NLVGIRFS 186


>sp|MFNA_THEGJ|PROBABLE L-aspartate decarboxylase|Thermococcus gammatolerans (strain DSM

Query: 1 GNLVGIRLNW 10
G ++G++L W
Sbjct: 128 GEMLGVKLIW 137


>sp|Y3716_METBF|UPF0173 metal-dependent hydrolase Mbar_A3716|Methanosarcina barkeri

Query: 3 LVGIRLNW 10
+VG+++ W
Sbjct: 1 MVGVKITW 8


>sp|THI4_METTP|THIAMINE thiazole synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 LVGIRLNW 10
+VG+ +NW
Sbjct: 138 IVGLVINW 145


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 NLVGIRLNW 10
N GI+L W
Sbjct: 830 NKAGIKLRW 838




176|Sequence|876|885|IRLNWDDRTV

>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IRLNWDDRTV 10
+RL WDDR +
Sbjct: 499 VRLPWDDRQI 508


>sp|NCPP_SACS2|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus solfataricus

Query: 1 IRLNWD 6
+RLNWD
Sbjct: 24 LRLNWD 29


>sp|SYK_SACS2|LYSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LNWDDRTV 10
+NWD+R V
Sbjct: 3 MNWDERRV 10


>sp|MOAA_AERPE|PROBABLE GTP 3',8-cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IRLNWDDR 8
+RL WD R
Sbjct: 258 VRLTWDGR 265


>sp|G6PI_NATPD|PROBABLE glucose-6-phosphate isomerase|Natronomonas pharaonis (strain ATCC

Query: 3 LNWDDRTV 10
++W DRTV
Sbjct: 150 VDWTDRTV 157


>sp|GLPK_THEGJ|GLYCEROL kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 RLNWDD 7
RL+WDD
Sbjct: 191 RLDWDD 196


>sp|HIS3_IGNH4|PHOSPHORIBOSYL-AMP cyclohydrolase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 RLN--WDDRTV 10
RLN W DRTV
Sbjct: 15 RLNYRWPDRTV 25


>sp|Y1627_PYRAE|PUTATIVE HTH-type transcriptional regulatory protein|Pyrobaculum aerophilum

Query: 3 LNWDDRTV 10
+ W+DRT+
Sbjct: 217 IKWEDRTI 224


>sp|Y2205_ARCFU|UNCHARACTERIZED protein AF_2205|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RLNWDDRTV 10
R+NWD +++
Sbjct: 265 RINWDGKSL 273


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 WDDRTV 10
WDD+TV
Sbjct: 279 WDDKTV 284


>sp|G6PI_HALWD|PROBABLE glucose-6-phosphate isomerase|Haloquadratum walsbyi (strain DSM

Query: 3 LNWDDRTV 10
++W DRT+
Sbjct: 152 VDWTDRTI 159


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WDDRTV 10
WDD+TV
Sbjct: 15 WDDQTV 20


>sp|DEOC_AERPE|DEOXYRIBOSE-PHOSPHATE aldolase|Aeropyrum pernix (strain ATCC 700893

Query: 5 WDDRTV 10
WDD+T+
Sbjct: 146 WDDKTL 151


>sp|NCPP_SACI7|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 IRLNWD 6
++LNWD
Sbjct: 24 LKLNWD 29


>sp|NCPP_SACI2|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 IRLNWD 6
++LNWD
Sbjct: 24 LKLNWD 29


>sp|NCPP_SACI1|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 IRLNWD 6
++LNWD
Sbjct: 24 LKLNWD 29


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 WDDRTV 10
W DRTV
Sbjct: 159 WKDRTV 164


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 5 WDDRTV 10
W DRTV
Sbjct: 159 WKDRTV 164


>sp|NCPP_SACI6|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 IRLNWD 6
++LNWD
Sbjct: 24 LKLNWD 29


>sp|NCPP_SACI3|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 IRLNWD 6
++LNWD
Sbjct: 24 LKLNWD 29


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IRLNWDDRTV 10
+RL WD++ +
Sbjct: 501 VRLPWDEKEI 510


>sp|NCPP_SACI4|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 IRLNWD 6
++LNWD
Sbjct: 24 LKLNWD 29


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 RLNWDDR 8
+LNW++R
Sbjct: 601 KLNWENR 607


Query: 5 WDDRTV 10
W DRTV
Sbjct: 162 WTDRTV 167


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 WDDRTV 10
W DRTV
Sbjct: 160 WKDRTV 165


>sp|Y103_SACS2|PROTEIN SSO0103|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 WDDRT 9
WDD+T
Sbjct: 85 WDDKT 89


>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain ATCC

Query: 2 RLNWDDRT 9
R+N+DD T
Sbjct: 488 RVNYDDET 495


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 LNWDDR 8
+NWD+R
Sbjct: 584 VNWDNR 589


>sp|CRTD_HALJT|CAROTENOID 3,4-desaturase|Haloarcula japonica (strain ATCC 49778

Query: 5 WDDRT 9
WDD+T
Sbjct: 303 WDDKT 307


>sp|CAPPA_HALSA|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 700922

Query: 5 WDDRTV 10
WD RTV
Sbjct: 164 WDGRTV 169


>sp|CAPPA_HALS3|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 29341

Query: 5 WDDRTV 10
WD RTV
Sbjct: 164 WDGRTV 169


>sp|Y2099_SACI3|PROTEIN M1627_2099|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 5 WDDRT 9
WDD+T
Sbjct: 77 WDDKT 81


>sp|Y772_SACI1|PROTEIN YN1551_0772|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 WDDRT 9
WDD+T
Sbjct: 77 WDDKT 81


>sp|Y2186_SACI2|PROTEIN LS215_2186|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 WDDRT 9
WDD+T
Sbjct: 77 WDDKT 81


>sp|Y2147_SACI7|PROTEIN YG5714_2147|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 WDDRT 9
WDD+T
Sbjct: 77 WDDKT 81


>sp|Y2028_SACI6|PROTEIN M164_2028|Saccharolobus islandicus (strain M.16.4 /

Query: 5 WDDRT 9
WDD+T
Sbjct: 77 WDDKT 81


>sp|Y2021_SACI4|PROTEIN M1425_2021|Saccharolobus islandicus (strain M.14.25 /

Query: 5 WDDRT 9
WDD+T
Sbjct: 77 WDDKT 81


>sp|SYK_SULAC|LYSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IRLNWDDRTV 10
+ L WD+R V
Sbjct: 7 LALKWDERRV 16


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RLNWDDRTV 10
RL WD+R +
Sbjct: 498 RLPWDERWI 506


>sp|GLPK_THEKO|GLYCEROL kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RLNWDD 7
+L+WDD
Sbjct: 191 KLDWDD 196




177|Sequence|881|890|DDRTVNDLED

>sp|Y976_METJA|UNCHARACTERIZED protein MJ0976|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DRTVNDLED 10
+RTVND++D
Sbjct: 263 ERTVNDIDD 271


>sp|RL37A_METST|LARGE ribosomal subunit protein eL43|Methanosphaera stadtmanae (strain

Query: 3 RTVNDLED 10
RTV D+ED
Sbjct: 23 RTVKDIED 30


>sp|PDXT_METM6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 3 RTVNDLE 9
RTVNDLE
Sbjct: 31 RTVNDLE 37


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 RTVNDLE 9
RT+NDLE
Sbjct: 364 RTLNDLE 370


>sp|Y83B_METJA|PROBABLE pilin MJ0835.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DDRTVNDLED 10
DD+ ++D+E+
Sbjct: 46 DDKVISDVEN 55


>sp|RL3_METJA|LARGE ribosomal subunit protein uL3|Methanocaldococcus jannaschii (strain

Query: 1 DDRTVNDLE 9
D +TV DLE
Sbjct: 122 DRKTVEDLE 130


>sp|SRP54_METBF|SIGNAL recognition particle 54 kDa|Methanosarcina barkeri (strain Fusaro

Query: 1 DDRTVNDL 8
D+RTVN++
Sbjct: 24 DERTVNEV 31


>sp|SRP54_METAC|SIGNAL recognition particle 54 kDa|Methanosarcina acetivorans (strain

Query: 1 DDRTVNDL 8
D+RTVN++
Sbjct: 24 DERTVNEV 31


>sp|RNJ_HALSA|RIBONUCLEASE J|Halobacterium salinarum (strain ATCC 700922

Query: 1 DDRTVNDLE 9
DDR ++DLE
Sbjct: 63 DDRVMSDLE 71


>sp|HISX_METKA|HISTIDINOL dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 DDRTVNDLED 10
D+RTV LE+
Sbjct: 77 DERTVEALEE 86




178|Sequence|886|895|NDLEDSYGQQ

>sp|RRP41_PYRAR|EXOSOME complex component Rrp41|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 NDLEDSYGQ 9
N LED+YG+
Sbjct: 174 NGLEDNYGE 182


>sp|RRP41_PYRIL|EXOSOME complex component Rrp41|Pyrobaculum islandicum (strain DSM 4184

Query: 1 NDLEDSYGQ 9
N LED YG+
Sbjct: 174 NGLEDQYGE 182


>sp|RRP41_PYRCJ|EXOSOME complex component Rrp41|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 NDLEDSYGQ 9
N LED+YG+
Sbjct: 174 NGLEDNYGE 182


>sp|RRP41_PYRNV|EXOSOME complex component Rrp41|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 NDLEDSYGQ 9
N LED YG+
Sbjct: 174 NGLEDQYGE 182


>sp|RRP41_PYRAE|EXOSOME complex component Rrp41|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 NDLEDSYGQ 9
N LED YG+
Sbjct: 174 NGLEDQYGE 182


>sp|RRP41_AERPE|EXOSOME complex component Rrp41|Aeropyrum pernix (strain ATCC 700893

Query: 1 NDLEDSYGQ 9
++LED YG+
Sbjct: 176 DELEDMYGE 184


>sp|PUS10_IGNAA|TRNA pseudouridine synthase Pus10|Ignisphaera aggregans (strain DSM

Query: 1 NDLEDSYGQQ 10
ND+ D+Y Q+
Sbjct: 101 NDIIDTYSQR 110


>sp|MOAA_METMP|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain DSM 14266

Query: 3 LEDSYGQQ 10
+ED YG+Q
Sbjct: 1 MEDRYGRQ 8


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 NDLEDSYG 8
N+LE+ YG
Sbjct: 278 NELEERYG 285


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 NDLEDSYG 8
N+LE+ YG
Sbjct: 274 NELEEKYG 281


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 2 DLEDSYGQQ 10
DLE+ YG++
Sbjct: 219 DLEERYGER 227


>sp|CSG_METMA|MAJOR S-layer protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NDLEDSYGQ 9
ND+ D+YG+
Sbjct: 41 NDIIDTYGE 49


>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NDLEDSYG 8
NDLE YG
Sbjct: 851 NDLEGRYG 858


>sp|Y137_METJA|UNCHARACTERIZED protein MJ0137|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NDLEDSYGQQ 10
N L+D YG++
Sbjct: 206 NLLKDKYGEE 215


>sp|HEXPP_SACS2|HEXAPRENYL pyrophosphate synthase|Saccharolobus solfataricus (strain ATCC

Query: 2 DLEDSYG 8
D++DSYG
Sbjct: 59 DIKDSYG 65




179|Sequence|891|900|SYGQQWTYEQ

>sp|THI4_NATPD|THIAMINE thiazole synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 GQQWTYE 9
GQ+WT E
Sbjct: 20 GQEWTEE 26


>sp|THI4_HALMA|THIAMINE thiazole synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 GQQWTYE 9
GQ+WT E
Sbjct: 23 GQEWTEE 29


>sp|GATE_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Haloarcula marismortui (strain ATCC

Query: 1 SYGQQW 6
+YGQ+W
Sbjct: 471 AYGQRW 476


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 QQWTYEQ 10
+QW Y+Q
Sbjct: 398 KQWVYKQ 404


>sp|CBIT_THEAC|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 3 GQQWTYE 9
G+ W YE
Sbjct: 5 GENWVYE 11


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SYGQQWTY 8
+YG+ W Y
Sbjct: 2743 TYGESWIY 2750


>sp|COFH_HALMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Haloarcula marismortui (strain ATCC

Query: 3 GQQWTYEQ 10
G W+YE+
Sbjct: 216 GTDWSYEE 223


>sp|6PGD_HALVD|6-PHOSPHOGLUCONATE dehydrogenase, NAD(+)-dependent, decarboxylating|Haloferax volcanii

Query: 3 GQQWTYEQ 10
G QW Y++
Sbjct: 134 GPQWAYDE 141


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 2 YGQQWTYEQ 10
YG +W E+
Sbjct: 636 YGAEWAVEE 644


>sp|SYY1_PYRAE|TYROSINE--TRNA ligase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 6 WTYEQ 10
WTYE+
Sbjct: 316 WTYEE 320


>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 1 SYGQQWT 7
S+GQ WT
Sbjct: 232 SHGQIWT 238


>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 1 SYGQQWT 7
S+GQ WT
Sbjct: 232 SHGQIWT 238


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 1 SYGQQWT 7
S+GQ WT
Sbjct: 236 SHGQIWT 242


>sp|RS15_METS5|SMALL ribosomal subunit protein uS15|Metallosphaera sedula (strain ATCC

Query: 4 QQWTYE 9
Q WTY+
Sbjct: 135 QDWTYD 140




180|Sequence|896|905|WTYEQRKVVE

>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 2 TYEQRKVVE 10
TY+ RK+VE
Sbjct: 312 TYQHRKIVE 320


>sp|COFH_HALMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Haloarcula marismortui (strain ATCC

Query: 3 YEQRKVVE 10
YEQR+V++
Sbjct: 422 YEQRRVID 429


>sp|Y574_METTH|UNCHARACTERIZED protein MTH_574|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 WTYEQRKVVE 10
W YE+R+ E
Sbjct: 203 WMYEKRETRE 212


>sp|DAPB_METAC|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TYEQRKVVE 10
T EQRKV++
Sbjct: 104 TPEQRKVID 112


>sp|RF1_HALMA|PEPTIDE chain release factor subunit|Haloarcula marismortui (strain ATCC

Query: 3 YEQRKVVE 10
YE RKV+E
Sbjct: 15 YEFRKVIE 22


>sp|RS5_HALMA|SMALL ribosomal subunit protein uS5|Haloarcula marismortui (strain ATCC

Query: 2 TYEQRKVVE 10
T+E+R+V+E
Sbjct: 204 TFEKREVIE 212


>sp|RF1_HALSA|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 3 YEQRKVVE 10
YE RKV+E
Sbjct: 15 YEFRKVIE 22


>sp|RF1_HALS3|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 3 YEQRKVVE 10
YE RKV+E
Sbjct: 15 YEFRKVIE 22


>sp|RF1_HALWD|PEPTIDE chain release factor subunit|Haloquadratum walsbyi (strain DSM

Query: 3 YEQRKVVE 10
YE RKV+E
Sbjct: 15 YEFRKVIE 22


>sp|RF1_HALLT|PEPTIDE chain release factor subunit|Halorubrum lacusprofundi (strain

Query: 3 YEQRKVVE 10
YE RKV+E
Sbjct: 15 YEFRKVIE 22


>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 1 WTYEQRKVV 9
WT++ KVV
Sbjct: 334 WTHDDIKVV 342


>sp|RS19_THEAC|SMALL ribosomal subunit protein uS19|Thermoplasma acidophilum (strain

Query: 2 TYEQRKVVE 10
YEQ+K++E
Sbjct: 65 NYEQKKLME 73




181|Sequence|901|910|RKVVEFTCHT

>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 1 RKVVEFTC 8
R V+EF C
Sbjct: 382 RAVIEFLC 389




182|Sequence|906|915|FTCHTAFFVS

>sp|EF1A_METTP|ELONGATION factor 1-alpha|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FTCHTA 6
F CHTA
Sbjct: 341 FHCHTA 346


>sp|EF1A_METTH|ELONGATION factor 1-alpha|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FTCHTA 6
F CHTA
Sbjct: 329 FHCHTA 334


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 FTCHTA 6
F CHTA
Sbjct: 339 FHCHTA 344


>sp|EF1A_METMJ|ELONGATION factor 1-alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FTCHTA 6
F CHTA
Sbjct: 339 FHCHTA 344


>sp|EF1A_METKA|ELONGATION factor 1-alpha|Methanopyrus kandleri (strain AV19 /

Query: 1 FTCHTA 6
F CHTA
Sbjct: 339 FHCHTA 344


>sp|EF1A_METHJ|ELONGATION factor 1-alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FTCHTA 6
F CHTA
Sbjct: 339 FHCHTA 344


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 1 FTCHTA 6
F CHTA
Sbjct: 338 FHCHTA 343


>sp|EF1A_METAR|ELONGATION factor 1-alpha|Methanocella arvoryzae (strain DSM 22066

Query: 1 FTCHTA 6
F CHTA
Sbjct: 343 FHCHTA 348


>sp|PSTB_METBU|PHOSPHATE import ATP-binding protein PstB|Methanococcoides burtonii (strain

Query: 4 HTAFFV 9
HTAFF+
Sbjct: 219 HTAFFL 224




183|Sequence|911|920|AFFVSIVVVQ

***** No hits found ******


184|Sequence|916|925|IVVVQWADLI

>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 3 VVQWADLI 10
V QWADL+
Sbjct: 398 VAQWADLV 405


>sp|ASSY_PYRAE|ARGININOSUCCINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 QWADLI 10
QWADL+
Sbjct: 306 QWADLV 311


>sp|ASSY_SULTO|ARGININOSUCCINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 QWADLI 10
QWADL+
Sbjct: 299 QWADLV 304


>sp|Y1115_HALSA|PROBABLE S-adenosyl-L-methionine-binding protein VNG_1115H|Halobacterium

Query: 1 IVVVQWAD 8
+VVV WAD
Sbjct: 51 VVVVWWAD 58


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 4 VQWADLI 10
+ WADLI
Sbjct: 138 LSWADLI 144


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 4 VQWADLI 10
+ WADLI
Sbjct: 144 LSWADLI 150


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 4 VQWADLI 10
+ WADLI
Sbjct: 129 LSWADLI 135


>sp|FENR_SULTO|FERREDOXIN--NADP reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IVVVQWADLI 10
I + +WAD+I
Sbjct: 80 IRIKEWADMI 89


>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 3 VVQWADL 9
V+QWA L
Sbjct: 36 VIQWAHL 42


>sp|ASSY_SULAC|ARGININOSUCCINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 QWADLI 10
QW+DL+
Sbjct: 299 QWSDLV 304


>sp|FENR1_SULAC|FERREDOXIN--NADP reductase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IVVVQWADLI 10
I + +WAD+I
Sbjct: 75 IRINEWADMI 84




185|Sequence|921|930|WADLIICKTR

>sp|SURE_METHJ|5'-NUCLEOTIDASE SurE|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 WADLIIC 7
WAD+++C
Sbjct: 46 WADVVVC 52


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 1 WADLII 6
WADLII
Sbjct: 140 WADLII 145


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 1 WADLII 6
WADLI+
Sbjct: 131 WADLIV 136


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 WADLII 6
WADLI+
Sbjct: 146 WADLIV 151


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 2 ADLIICKT 9
AD+I+C++
Sbjct: 209 ADIIVCRS 216


>sp|HEM1_METAR|GLUTAMYL-TRNA reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 ADLIICKT 9
AD++IC T
Sbjct: 233 ADVVICAT 240


>sp|COFC_METAR|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 2 ADLIICKTR 10
AD++IC R
Sbjct: 107 ADIVICPGR 115


>sp|HEM1_METVS|GLUTAMYL-TRNA reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 WADLIICKT 9
++D+IIC T
Sbjct: 216 FSDVIICAT 224


>sp|HEM1_METMP|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 WADLIICKT 9
++D+IIC T
Sbjct: 217 FSDVIICAT 225


>sp|HEM1_METM7|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C7 /

Query: 1 WADLIICKT 9
++D+IIC T
Sbjct: 217 FSDVIICAT 225


>sp|HEM1_METM6|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C6 /

Query: 1 WADLIICKT 9
++D+IIC T
Sbjct: 217 FSDVIICAT 225


>sp|HEM1_METM5|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C5 /

Query: 1 WADLIICKT 9
++D+IIC T
Sbjct: 217 FSDVIICAT 225


>sp|COFC_METKA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 ADLIICKTR 10
AD+++C +R
Sbjct: 105 ADVVLCPSR 113


>sp|Y1341_METJA|UNCHARACTERIZED protein MJ1341|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WADLIICKT 9
+ D+++C T
Sbjct: 150 YGDIVVCST 158


>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 1 WADLIICKT 9
+ADL+ C T
Sbjct: 36 YADLVYCLT 44




186|Sequence|926|935|ICKTRRNSVF

>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 3 KTRRNSV 9
KTRRN+V
Sbjct: 249 KTRRNTV 255


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 3 KTRRNSV 9
KTRRN+V
Sbjct: 250 KTRRNTV 256


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CKTRRNSV 9
C T+RN+V
Sbjct: 248 CNTKRNAV 255




187|Sequence|931|940|RNSVFQQGMK

>sp|G3P_SACS2|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RNSVFQQGMK 10
RN++FQ G K
Sbjct: 102 RNAIFQGGEK 111


>sp|G3P_SACI7|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RNSVFQQGMK 10
RN++FQ G K
Sbjct: 102 RNAIFQGGEK 111


>sp|G3P_SACI6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RNSVFQQGMK 10
RN++FQ G K
Sbjct: 102 RNAIFQGGEK 111


>sp|G3P_SACI4|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RNSVFQQGMK 10
RN++FQ G K
Sbjct: 102 RNAIFQGGEK 111


>sp|G3P_SACI3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 RNSVFQQGMK 10
RN++FQ G K
Sbjct: 102 RNAIFQGGEK 111


>sp|G3P_SACI2|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RNSVFQQGMK 10
RN++FQ G K
Sbjct: 102 RNAIFQGGEK 111


>sp|G3P_SACI1|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RNSVFQQGMK 10
RN++FQ G K
Sbjct: 102 RNAIFQGGEK 111


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RNSVFQQG 8
++SV+QQG
Sbjct: 152 KSSVYQQG 159




188|Sequence|936|945|QQGMKNKILI

>sp|Y956_METJA|UNCHARACTERIZED protein MJ0956|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QGMKNKILI 10
GMKN++L+
Sbjct: 21 HGMKNRVLL 29


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QQGMKNKIL 9
++ MKNK+L
Sbjct: 243 EEDMKNKVL 251


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QQGMKNKIL 9
++ MKNK+L
Sbjct: 243 EEDMKNKVL 251


>sp|Y1006_METJA|UNCHARACTERIZED ATP-binding protein MJ1006|Methanocaldococcus jannaschii (strain

Query: 1 QQGMKNKILI 10
Q G++N+IL
Sbjct: 4 QNGLRNRILF 13




189|Sequence|941|950|NKILIFGLFE

>sp|SYC_THEON|CYSTEINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 5 IFGLFE 10
+FGLFE
Sbjct: 409 VFGLFE 414


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 5 IFGLFE 10
+FGLFE
Sbjct: 409 VFGLFE 414


>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NKILIFGLFE 10
NKI++ LFE
Sbjct: 367 NKIIVIELFE 376


>sp|AROA_SACI7|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain

Query: 1 NKILIFGL 8
N ILIFG+
Sbjct: 347 NSILIFGI 354


>sp|AROA_SACI3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 NKILIFGL 8
N ILIFG+
Sbjct: 347 NSILIFGI 354


>sp|AROA_SACI2|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 NKILIFGL 8
N ILIFG+
Sbjct: 347 NSILIFGI 354


>sp|AROA_SACI1|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain

Query: 1 NKILIFGL 8
N ILIFG+
Sbjct: 347 NSILIFGI 354


>sp|AROA_SACI6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NKILIFGL 8
N ILIFG+
Sbjct: 347 NSILIFGI 354


>sp|AROA_SACI4|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 1 NKILIFGL 8
N ILIFG+
Sbjct: 347 NSILIFGI 354


>sp|AROA_SACS2|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 NKILIFGL 8
N ILIFG+
Sbjct: 347 NSILIFGI 354


>sp|SYC_METVS|CYSTEINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 5 IFGLFE 10
IFGLFE
Sbjct: 407 IFGLFE 412


>sp|SYC_METMP|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 IFGLFE 10
IFGLFE
Sbjct: 408 IFGLFE 413


>sp|GMHA_THEAC|PROBABLE phosphoheptose isomerase|Thermoplasma acidophilum (strain ATCC

Query: 1 NKILIFG 7
NK+++FG
Sbjct: 37 NKLIVFG 43


>sp|SYC_METM7|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 5 IFGLFE 10
IFGLFE
Sbjct: 408 IFGLFE 413


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 5 IFGLFE 10
IFGLFE
Sbjct: 408 IFGLFE 413


>sp|Y1211_METTH|PUTATIVE transport protein MTH_1211|Methanothermobacter thermautotrophicus

Query: 3 ILIFGLF 9
+LIFGLF
Sbjct: 261 VLIFGLF 267




190|Sequence|946|955|FGLFEETALA

>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FGLFEETALA 10
FG++ TALA
Sbjct: 308 FGIYSPTALA 317


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FGLFEETALA 10
FG++ TALA
Sbjct: 308 FGIYSPTALA 317


>sp|SEPS_METTP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FGLFEETALA 10
FG++ TALA
Sbjct: 309 FGVYSPTALA 318


>sp|SEPS_METMA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FGLFEETALA 10
FG++ TALA
Sbjct: 308 FGIYSPTALA 317


>sp|SEPS_METAC|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FGLFEETALA 10
FG++ TALA
Sbjct: 308 FGIYSPTALA 317


>sp|SEPS_ARCFU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FGLFEETALA 10
FG++ TALA
Sbjct: 306 FGIYSPTALA 315


>sp|HMGCS_AERPE|HYDROXYMETHYLGLUTARYL-COA synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GLFEETALA 10
GLFE+T L+
Sbjct: 229 GLFEKTGLS 237


>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 FGLFEETALA 10
FG++ TAL+
Sbjct: 308 FGIYSATALS 317


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 1 FGLFEETALA 10
FG + TALA
Sbjct: 523 FGAYARTALA 532




191|Sequence|951|960|ETALAAFLSY

>sp|Y1365_METJA|UNCHARACTERIZED protein MJ1365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TALAAFLS 9
TAL AFLS
Sbjct: 310 TALVAFLS 317


>sp|AROA_METBU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 ETALAAFLSY 10
+TA A F+SY
Sbjct: 399 DTAEAIFISY 408




192|Sequence|956|965|AFLSYCPGMD

>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 LSYCPGMD 10
+ YCPG++
Sbjct: 298 MGYCPGVE 305


>sp|Y556_ARCFU|PUTATIVE sulfur carrier protein AF_0556|Archaeoglobus fulgidus (strain

Query: 4 SYCPG 8
SYCPG
Sbjct: 9 SYCPG 13


>sp|Y1170_THEAC|PUTATIVE sulfur carrier protein Ta1170/Ta1414|Thermoplasma acidophilum

Query: 4 SYCPG 8
SYCPG
Sbjct: 14 SYCPG 18


>sp|Y719_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 LSYCPGM 9
+ YCPG+
Sbjct: 33 MKYCPGV 39


>sp|Y3143_PYRAE|UPF0273 protein PAE3143|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 SYCPGMD 10
SY PG+D
Sbjct: 8 SYVPGLD 14


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain

Query: 2 FLSYCPG 8
F+ +CPG
Sbjct: 8 FVDWCPG 14


>sp|Y1407_ARCFU|UNCHARACTERIZED protein AF_1407|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FLSYCPG 8
FL+YC G
Sbjct: 46 FLNYCTG 52


>sp|Y816_METJA|UNCHARACTERIZED protein MJ0816|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FLSYCP 7
+L+YCP
Sbjct: 250 YLNYCP 255


>sp|AAT_PYRAB|ASPARTATE aminotransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 AFLSYCPGM 9
AF+SY P +
Sbjct: 120 AFVSYAPAV 128


>sp|LEUD1_METKA|3-ISOPROPYLMALATE dehydratase small subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 3 LSYCPGMD 10
L CPG+D
Sbjct: 104 LVVCPGVD 111


>sp|OFOB2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Aeropyrum pernix (strain ATCC

Query: 1 AFLSYCPG 8
A++ +CPG
Sbjct: 12 AWVQWCPG 19


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 3 LSYCPGMD 10
L Y PG+D
Sbjct: 361 LGYIPGVD 368


>sp|Y1036_METJA|UNCHARACTERIZED protein MJ1036|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FLSYCP 7
+L+YCP
Sbjct: 80 YLAYCP 85




193|Sequence|961|970|CPGMDVALRM

>sp|IDI_HALMA|ISOPENTENYL-DIPHOSPHATE Delta-isomerase|Haloarcula marismortui (strain ATCC 43049

Query: 1 CPGMDVALR 9
CP ++A+R
Sbjct: 174 CPWFEIAMR 182


>sp|IDI_HALSA|ISOPENTENYL-DIPHOSPHATE Delta-isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 1 CPGMDVALR 9
CP ++A+R
Sbjct: 189 CPWFEIAMR 197




194|Sequence|966|975|VALRMYPLKP

>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain ATCC

Query: 2 ALRMYPLKP 10
AL YPL+P
Sbjct: 275 ALATYPLQP 283


>sp|BIOB_META3|BIOTIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 LRMYPLKP 10
++ YPLKP
Sbjct: 81 IKEYPLKP 88


>sp|Y1422_METBF|MEMO1 family protein Mbar_A1422|Methanosarcina barkeri (strain Fusaro /

Query: 1 VALRMYPLKP 10
VA + YPL+P
Sbjct: 6 VAGQFYPLRP 15


>sp|Y1187_METJA|UNCHARACTERIZED protein MJ1187|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ALRMYPL 8
A+R+YPL
Sbjct: 125 AMRIYPL 131


>sp|PUR7_THEKO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LRMYPLK 9
L+MYPL+
Sbjct: 79 LKMYPLE 85


>sp|KDPB_THEAC|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 ALRMYPLK 9
A+RMYP K
Sbjct: 307 AVRMYPNK 314


>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 2 ALRMYPL 8
ALR YPL
Sbjct: 311 ALRSYPL 317


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ALRMYP 7
A+RMYP
Sbjct: 418 AIRMYP 423


>sp|PELO_STAMF|PROTEIN pelota homolog|Staphylothermus marinus (strain ATCC 43588

Query: 1 VALRMYPLK 9
VAL YPLK
Sbjct: 343 VALLRYPLK 351


>sp|MOAA_PYRAB|PROBABLE GTP 3',8-cyclase|Pyrococcus abyssi (strain GE5 /

Query: 6 YPLKP 10
YPLKP
Sbjct: 200 YPLKP 204


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VALRMYPLKP 10
+AL +YP+ P
Sbjct: 489 IALMLYPVIP 498


>sp|MOAA_PYRFU|PROBABLE GTP 3',8-cyclase|Pyrococcus furiosus (strain ATCC 43587

Query: 6 YPLKP 10
YPLKP
Sbjct: 200 YPLKP 204


>sp|MOAA_PYRHO|PROBABLE GTP 3',8-cyclase|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 YPLKP 10
YPLKP
Sbjct: 200 YPLKP 204




195|Sequence|971|980|YPLKPSWWFC

>sp|RL3_SULTO|LARGE ribosomal subunit protein uL3|Sulfurisphaera tokodaii (strain DSM

Query: 1 YPLKPSW 7
YP++PSW
Sbjct: 319 YPIRPSW 325


>sp|RL3_SULAC|LARGE ribosomal subunit protein uL3|Sulfolobus acidocaldarius (strain

Query: 1 YPLKPSW 7
YP++PSW
Sbjct: 318 YPIRPSW 324


>sp|RS19E_METTH|SMALL ribosomal subunit protein eS19|Methanothermobacter

Query: 2 PLKPSWWF 9
P P WW+
Sbjct: 45 PENPDWWY 52


>sp|MTRC_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanothermobacter marburgensis

Query: 3 LKPSWWF 9
L PSWW
Sbjct: 222 LNPSWWL 228


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 4 KPSWW 8
KP WW
Sbjct: 70 KPGWW 74


>sp|METXA_METST|HOMOSERINE O-acetyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 KPSWW 8
KP WW
Sbjct: 71 KPGWW 75


>sp|METXA_METRM|HOMOSERINE O-acetyltransferase|Methanobrevibacter ruminantium (strain ATCC

Query: 4 KPSWW 8
KP WW
Sbjct: 70 KPGWW 74


>sp|METXA_METMS|HOMOSERINE O-acetyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 4 KPSWW 8
KP WW
Sbjct: 70 KPGWW 74


>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 4 KPSWW 8
KP WW
Sbjct: 68 KPGWW 72


>sp|METXA_METFP|HOMOSERINE O-acetyltransferase|Methanobacterium formicicum (strain DSM 3637

Query: 4 KPSWW 8
KP WW
Sbjct: 70 KPGWW 74


>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 4 KPSWW 8
KP WW
Sbjct: 70 KPGWW 74


>sp|METXA_METBU|HOMOSERINE O-acetyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 4 KPSWW 8
KP WW
Sbjct: 71 KPGWW 75


>sp|METXA_METAC|HOMOSERINE O-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 KPSWW 8
KP WW
Sbjct: 89 KPGWW 93


>sp|GLCDH_METS5|GLUCOSE 1-dehydrogenase|Metallosphaera sedula (strain ATCC 51363

Query: 1 YPLKPSWWFC 10
Y + SWW C
Sbjct: 163 YLQRRSWWRC 172


>sp|HEM3_AERPE|PROBABLE porphobilinogen deaminase|Aeropyrum pernix (strain ATCC 700893

Query: 4 KPSWW 8
KP WW
Sbjct: 219 KPPWW 223


>sp|HELS_CALMQ|ATP-DEPENDENT DNA helicase Hel308|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 LKPSW 7
LKPSW
Sbjct: 132 LKPSW 136


>sp|MT872_AERPE|DNA (cytosine-5-)-methyltransferase M.ApeKI|Aeropyrum pernix (strain

Query: 1 YPLKPSW 7
+PLKPS+
Sbjct: 390 HPLKPSY 396


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 YPLKPSWW 8
+PL PS W
Sbjct: 445 HPLLPSCW 452


>sp|MTRC_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanothermobacter

Query: 3 LKPSWWF 9
L P WW
Sbjct: 222 LNPGWWL 228


>sp|BIOB_META3|BIOTIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 YPLKP 5
YPLKP
Sbjct: 84 YPLKP 88


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YPLKPSW 7
YP+ P W
Sbjct: 84 YPVVPRW 90


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YPLKPSW 7
YP+ P W
Sbjct: 84 YPVVPRW 90


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 YPLKPSW 7
YP+ P W
Sbjct: 81 YPVVPRW 87


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YPLKPSW 7
YP+ P W
Sbjct: 84 YPVLPRW 90


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YPLKPSW 7
YP+ P W
Sbjct: 84 YPVLPRW 90


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YPLKPSW 7
YP+ P W
Sbjct: 84 YPVLPRW 90


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 YPLKPSW 7
YP+ P W
Sbjct: 84 YPVLPRW 90


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 PLKPSWWF 9
PLKPS++
Sbjct: 961 PLKPSFYL 968


>sp|RL3_STAMF|LARGE ribosomal subunit protein uL3|Staphylothermus marinus (strain ATCC

Query: 1 YPLKPSWWF 9
+P++P W+
Sbjct: 369 HPIRPPSWY 377




196|Sequence|976|985|SWWFCAFPYS

>sp|TDXH_METJA|PEROXIREDOXIN jannaschii (strain ATCC 43067

Query: 2 WWFC 5
WWFC
Sbjct: 209 WWFC 212


>sp|TDXH_IGNH4|PEROXIREDOXIN hospitalis (strain KIN4/I /

Query: 2 WWFC 5
WWFC
Sbjct: 206 WWFC 209


>sp|TDXH_METVS|PEROXIREDOXIN vannielii (strain ATCC 35089

Query: 2 WWFC 5
WWFC
Sbjct: 208 WWFC 211


>sp|TDXH_AERPE|PEROXIREDOXIN pernix (strain ATCC 700893

Query: 2 WWFC 5
WWFC
Sbjct: 210 WWFC 213


>sp|TDXH_METMP|PEROXIREDOXIN maripaludis (strain DSM 14266

Query: 2 WWFC 5
WWFC
Sbjct: 208 WWFC 211


>sp|CBIM2_METPE|PUTATIVE cobalt transport protein CbiM|Methanosphaerula palustris (strain

Query: 2 WWFCAFPY 9
WW A P+
Sbjct: 16 WWLIALPF 23


>sp|TDXH_METM5|PEROXIREDOXIN maripaludis (strain C5 /

Query: 2 WWFC 5
WWFC
Sbjct: 208 WWFC 211


>sp|TDXH_PYRAB|PEROXIREDOXIN abyssi (strain GE5 /

Query: 2 WWFC 5
WWFC
Sbjct: 208 WWFC 211


>sp|TDXH_PYRFU|PEROXIREDOXIN furiosus (strain ATCC 43587

Query: 2 WWFC 5
WWFC
Sbjct: 208 WWFC 211


>sp|TDXH_PYRHO|PEROXIREDOXIN horikoshii (strain ATCC 700860

Query: 2 WWFC 5
WWFC
Sbjct: 208 WWFC 211


>sp|TDXH_ARCFU|PEROXIREDOXIN fulgidus (strain ATCC 49558

Query: 2 WWFC 5
WWFC
Sbjct: 208 WWFC 211


>sp|TDXH_THEKO|PEROXIREDOXIN kodakarensis (strain ATCC BAA-918

Query: 2 WWFC 5
WWFC
Sbjct: 208 WWFC 211


>sp|TDXH_HYPBU|PEROXIREDOXIN butylicus (strain DSM 5456

Query: 2 WWFC 5
WWFC
Sbjct: 206 WWFC 209


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 2 WWFCA 6
+WFCA
Sbjct: 276 YWFCA 280


>sp|TDXH_NANEQ|PEROXIREDOXIN equitans (strain Kin4-M)

Query: 2 WWFC 5
WWFC
Sbjct: 214 WWFC 217


>sp|TDXH_STAMF|PEROXIREDOXIN marinus (strain ATCC 43588

Query: 2 WWFC 5
WWFC
Sbjct: 206 WWFC 209


>sp|YD5A_METJA|UNCHARACTERIZED protein MJ1351.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SWWFCAFPYS 10
+WW A P++
Sbjct: 180 AWWGGAHPFN 189


>sp|YF9A_METJA|UNCHARACTERIZED protein MJ1597.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FCAFPYS 10
+C FPYS
Sbjct: 85 YCQFPYS 91




197|Sequence|981|990|AFPYSFLIFV

>sp|SYH_SULTO|HISTIDINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 YSFLIFV 10
YSFLIF+
Sbjct: 384 YSFLIFI 390


>sp|ACDG_METKA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanopyrus kandleri

Query: 2 FPYSFL 7
FPY+FL
Sbjct: 272 FPYAFL 277


>sp|Y816_METJA|UNCHARACTERIZED protein MJ0816|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AFPYSFL 7
+FPY FL
Sbjct: 198 SFPYGFL 204


>sp|TATC_METAR|SEC-INDEPENDENT protein translocase protein TatC|Methanocella arvoryzae (strain DSM

Query: 2 FPYSFLIFV 10
FP+S L+FV
Sbjct: 115 FPFSLLLFV 123


>sp|PURP_METAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocella arvoryzae (strain DSM

Query: 3 PYSFLIF 9
PYS+L++
Sbjct: 331 PYSYLLY 337




198|Sequence|986|995|FLIFVYDEIR

>sp|CDC62_SULAC|ORC1-TYPE DNA replication protein 2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 FLIFVYDEI 9
FL+ VYDE+
Sbjct: 167 FLVRVYDEL 175


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LIFVYDEIR 10
L FV+DE+R
Sbjct: 628 LKFVWDELR 636


>sp|CDC62_SACS2|ORC1-TYPE DNA replication protein 2|Saccharolobus solfataricus (strain ATCC

Query: 1 FLIFVYDEI 9
FL+ +YDEI
Sbjct: 169 FLVRLYDEI 177


>sp|CDC62_SULTO|ORC1-TYPE DNA replication protein 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FLIFVYDEI 9
FL+ +YDE+
Sbjct: 170 FLVRIYDEL 178


>sp|RAD50_THEAC|DNA double-strand break repair Rad50|Thermoplasma acidophilum (strain

Query: 2 LIFVYDEIR 10
L+ +Y+EIR
Sbjct: 407 LVAIYEEIR 415


>sp|SRP54_SACS2|SIGNAL recognition particle 54 kDa|Saccharolobus solfataricus (strain

Query: 1 FLIFVYDEI 9
F+ VYDE+
Sbjct: 70 FISIVYDEL 78


>sp|SRP54_SACI7|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 FLIFVYDEI 9
F+ VYDE+
Sbjct: 70 FISIVYDEL 78


>sp|SRP54_SACI6|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 FLIFVYDEI 9
F+ VYDE+
Sbjct: 70 FISIVYDEL 78


>sp|SRP54_SACI4|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 FLIFVYDEI 9
F+ VYDE+
Sbjct: 70 FISIVYDEL 78


>sp|SRP54_SACI3|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 FLIFVYDEI 9
F+ VYDE+
Sbjct: 70 FISIVYDEL 78


>sp|SRP54_SACI2|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 FLIFVYDEI 9
F+ VYDE+
Sbjct: 70 FISIVYDEL 78


>sp|SRP54_SACI1|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 FLIFVYDEI 9
F+ VYDE+
Sbjct: 70 FISIVYDEL 78


>sp|SRP54_SULTO|SIGNAL recognition particle 54 kDa|Sulfurisphaera tokodaii (strain DSM

Query: 1 FLIFVYDEI 9
F+ VYDE+
Sbjct: 69 FISIVYDEL 77


>sp|SRP54_SULAC|SIGNAL recognition particle 54 kDa|Sulfolobus acidocaldarius (strain

Query: 1 FLIFVYDEI 9
F+ VYDE+
Sbjct: 69 FISIVYDEL 77




199|Sequence|991|1000|YDEIRKLILR

>sp|TDXH_ARCFU|PEROXIREDOXIN fulgidus (strain ATCC 49558

Query: 1 YDEIRKL 7
YDE RKL
Sbjct: 56 YDEFRKL 62


>sp|TOP6A_HYPBU|TYPE 2 DNA topoisomerase 6|Hyperthermus butylicus (strain DSM 5456

Query: 1 YDEIRKLIL 9
YDE RKL+L
Sbjct: 52 YDEKRKLLL 60


>sp|RRP42_PYRAB|EXOSOME complex component Rrp42|Pyrococcus abyssi (strain GE5 /

Query: 2 DEIRKLIL 9
+EIRKLIL
Sbjct: 259 EEIRKLIL 266


>sp|DUT_ARCFU|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Archaeoglobus

Query: 2 DEIRKLI 8
DEIRKLI
Sbjct: 7 DEIRKLI 13


>sp|TDXH_METJA|PEROXIREDOXIN jannaschii (strain ATCC 43067

Query: 1 YDEIRKL 7
YDE RKL
Sbjct: 57 YDEFRKL 63


>sp|HIS1_THEON|ATP phosphoribosyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 YDEIRKLILR 10
+DEI +L+L+
Sbjct: 187 FDEINELVLK 196


>sp|IF1A_METS5|TRANSLATION initiation factor 1A|Metallosphaera sedula (strain ATCC 51363

Query: 2 DEIRKLI 8
DEIRKLI
Sbjct: 87 DEIRKLI 93


>sp|SEPS_ARCFU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YDEIRKLI 8
YD++RK++
Sbjct: 340 YDDVRKMV 347


>sp|SYP_METS3|PROLINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DEIRKLI 8
DE+RKLI
Sbjct: 404 DEVRKLI 410


>sp|FEN_NITMS|FLAP endonuclease 1|Nitrosopumilus maritimus (strain SCM1)

Query: 1 YDEIRKLIL 9
Y EIRK+ L
Sbjct: 275 YQEIRKIFL 283


>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 YDEIRKL 7
Y+EIRKL
Sbjct: 358 YEEIRKL 364


>sp|G1PDH_ARCFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DEIRKLILR 10
+E RK++LR
Sbjct: 70 EEARKIVLR 78


>sp|RRP42_PYRFU|EXOSOME complex component Rrp42|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DEIRKLIL 9
+EIRK+IL
Sbjct: 259 EEIRKIIL 266


>sp|SYFA_THEAC|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 EIRKLILR 10
E RKL+LR
Sbjct: 322 EARKLVLR 329


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 YDEIRK 6
YDE+RK
Sbjct: 357 YDEVRK 362


>sp|KADA_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 2 DEIRKLILR 10
DE+RKL L+
Sbjct: 53 DEVRKLSLK 61


>sp|IF1A_AERPE|TRANSLATION initiation factor 1A|Aeropyrum pernix (strain ATCC 700893

Query: 2 DEIRKLI 8
DE+RKLI
Sbjct: 88 DEVRKLI 94




200|Sequence|996|1005|KLILRRNPGG

>sp|TRKA2_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 1 KLILRRNPG 9
KLILR +PG
Sbjct: 84 KLILRAHPG 92


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 1 KLILRRNP 8
KL+L RNP
Sbjct: 298 KLVLNRNP 305


>sp|CYAS_METBF|CYSTEATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KLILRRNPG 9
+L+LR PG
Sbjct: 38 RLVLRNQPG 46


>sp|CYAS_METAC|CYSTEATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KLILRRNPG 9
KL LR+ PG
Sbjct: 38 KLELRKQPG 46




201|Sequence|1001|1013|RNPGGWVEKETYY

>sp|END4_CENSY|PROBABLE endonuclease 4|Cenarchaeum symbiosum (strain A)

Query: 1 RNPGGWVEKE 10
RNP GW KE
Sbjct: 33 RNPRGWRAKE 42


>sp|NTPTH_STAMF|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Staphylothermus marinus (strain ATCC 43588

Query: 2 NPGGWVEKETYY 13
N GW+ K YY
Sbjct: 58 NEEGWLAKRNYY 69


>sp|COBD_PYRFU|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus furiosus (strain

Query: 4 GGWVEKETYY 13
G W+EK YY
Sbjct: 239 GVWLEKPNYY 248


>sp|ARNS_SULAC|SERINE/THREONINE-PROTEIN kinase ArnS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 NPGGWVEKETY 12
+PG WV +E Y
Sbjct: 305 DPGIWVGQEVY 315


>sp|END4_METMJ|PROBABLE endonuclease 4|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RNPGGWVEKE 10
RNP GW K+
Sbjct: 34 RNPRGWKVKD 43


>sp|END4_METPE|PROBABLE endonuclease 4|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 RNPGGWVEK 9
RNP GW K
Sbjct: 34 RNPRGWTFK 42


>sp|PRIS_THEVO|DNA primase small subunit PriS|Thermoplasma volcanium (strain ATCC

Query: 1 RNPGGWVE 8
+ PGGW++
Sbjct: 193 KRPGGWIK 200


>sp|RLME_METBU|RIBOSOMAL RNA large subunit methyltransferase|Methanococcoides burtonii

Query: 3 PGGWVE 8
PGGW+E
Sbjct: 49 PGGWLE 54


>sp|Y816_METJA|UNCHARACTERIZED protein MJ0816|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PGGWV 7
PGGWV
Sbjct: 63 PGGWV 67


>sp|NFI_AERPE|ENDONUCLEASE V|Aeropyrum pernix (strain ATCC 700893

Query: 3 PGGWVEKET 11
PGGW+ + T
Sbjct: 196 PGGWMPEPT 204


>sp|END4_NITMS|PROBABLE endonuclease 4|Nitrosopumilus maritimus (strain SCM1)

Query: 1 RNPGGWVEK 9
RNP GW K
Sbjct: 33 RNPRGWHAK 41


>sp|TRUA_METAR|TRNA pseudouridine synthase A|Methanocella arvoryzae (strain DSM 22066

Query: 1 RNPGGWVEK 9
+ P GW+EK
Sbjct: 192 KRPDGWIEK 200


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus

Query: 4 GGWVEKETY 12
GGW++ +TY
Sbjct: 71 GGWLDYDTY 79


>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 6 WVEKETYY 13
W+ K TYY
Sbjct: 391 WIVKHTYY 398


>sp|RLME_HALSA|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum

Query: 3 PGGWVE 8
PGGW++
Sbjct: 48 PGGWLQ 53


>sp|RLME_HALS3|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum

Query: 3 PGGWVE 8
PGGW++
Sbjct: 48 PGGWLQ 53


>sp|RLME_HALWD|RIBOSOMAL RNA large subunit methyltransferase|Haloquadratum walsbyi (strain

Query: 3 PGGWVE 8
PGGW++
Sbjct: 47 PGGWLQ 52


>sp|CBID_METB6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanoregula boonei (strain DSM 21154

Query: 3 PGGWVEK 9
P WVEK
Sbjct: 11 PAAWVEK 17


>sp|ACDD2_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 2 NPGGWVEK 9
NPG W +K
Sbjct: 178 NPGEWAKK 185


>sp|RLME_METAR|RIBOSOMAL RNA large subunit methyltransferase|Methanocella arvoryzae

Query: 3 PGGWVE 8
PGGW++
Sbjct: 49 PGGWLQ 54


>sp|TRUB_METAC|PROBABLE tRNA pseudouridine synthase B|Methanosarcina acetivorans (strain

Query: 3 PGGWVEKE 10
P GW +KE
Sbjct: 326 PKGWTKKE 333


>sp|RLME_NATPD|RIBOSOMAL RNA large subunit methyltransferase|Natronomonas pharaonis

Query: 3 PGGWVE 8
PGGW++
Sbjct: 47 PGGWLQ 52


>sp|RLME_METTP|RIBOSOMAL RNA large subunit methyltransferase|Methanothrix thermoacetophila

Query: 3 PGGWVE 8
PGGW++
Sbjct: 49 PGGWLQ 54


>sp|HIS4_META3|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus aeolicus (strain

Query: 5 GWVEKETY 12
GW+EK Y
Sbjct: 141 GWMEKTEY 148


>sp|TRUB_METBF|PROBABLE tRNA pseudouridine synthase B|Methanosarcina barkeri (strain Fusaro

Query: 3 PGGWVEKE 10
P GW +KE
Sbjct: 326 PKGWTKKE 333


>sp|Y427_METAR|UPF0173 metal-dependent hydrolase UNCMA_04270|Methanocella arvoryzae

Query: 2 NPGGWVEKET 11
+P GWV +T
Sbjct: 125 SPAGWVISDT 134


>sp|AMTAB_ARCFU|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Archaeoglobus

Query: 1 RNPGGWVEKE 10
R+ GW++KE
Sbjct: 335 RDIPGWIKKE 344


>sp|RLME_METMP|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 3 PGGWVE 8
PGGW++
Sbjct: 57 PGGWLQ 62


>sp|RLME_METBF|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina barkeri

Query: 3 PGGWVE 8
PGGW++
Sbjct: 49 PGGWLQ 54


>sp|RLME_THEAC|RIBOSOMAL RNA large subunit methyltransferase|Thermoplasma acidophilum

Query: 2 NPGGWVE 8
+PGGW +
Sbjct: 48 SPGGWTQ 54


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 NPGGWVEKE 10
+P GW+++E
Sbjct: 211 DPAGWLKRE 219


>sp|RLME_METMA|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina mazei (strain

Query: 3 PGGWVE 8
PGGW++
Sbjct: 49 PGGWLQ 54


>sp|RLME_METM6|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 3 PGGWVE 8
PGGW++
Sbjct: 57 PGGWLQ 62


>sp|RLME_METM5|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 3 PGGWVE 8
PGGW++
Sbjct: 57 PGGWLQ 62


>sp|RLME_METAC|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina acetivorans

Query: 3 PGGWVE 8
PGGW++
Sbjct: 49 PGGWLQ 54


>sp|TRUB_METMA|PROBABLE tRNA pseudouridine synthase B|Methanosarcina mazei (strain ATCC

Query: 3 PGGWVEKE 10
P GW +KE
Sbjct: 326 PRGWTKKE 333


>sp|RLME_META3|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus aeolicus

Query: 3 PGGWVE 8
PGGW++
Sbjct: 57 PGGWLQ 62


>sp|RLME_THEVO|RIBOSOMAL RNA large subunit methyltransferase|Thermoplasma volcanium

Query: 2 NPGGWVE 8
+PGGW +
Sbjct: 48 SPGGWTQ 54


>sp|RLME_HALMA|RIBOSOMAL RNA large subunit methyltransferase|Haloarcula marismortui

Query: 3 PGGWVE 8
PGGW++
Sbjct: 47 PGGWMQ 52


>sp|RLME_METVS|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus vannielii

Query: 3 PGGWVE 8
PGGW++
Sbjct: 57 PGGWLQ 62


>sp|RLME_METM7|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 3 PGGWVE 8
PGGW++
Sbjct: 57 PGGWLQ 62


>sp|RL10_IGNH4|LARGE ribosomal subunit protein uL10|Ignicoccus hospitalis (strain KIN4/I

Query: 4 GGWVEKET 11
GW+ KET
Sbjct: 267 AGWLTKET 274


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 NPGGWV 7
NPG W+
Sbjct: 165 NPGKWI 170


>sp|Y1257_METJA|UNCHARACTERIZED protein MJ1257|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NPGGWVE 8
+PGGW +
Sbjct: 216 SPGGWAK 222


>sp|LIPB1_PICTO|PROBABLE octanoyltransferase 1|Picrophilus torridus (strain ATCC 700027

Query: 3 PGGWVEK 9
PG W+EK
Sbjct: 126 PGIWIEK 132


>sp|RLME_HALLT|RIBOSOMAL RNA large subunit methyltransferase|Halorubrum lacusprofundi

Query: 3 PGGWVE 8
PGGW++
Sbjct: 47 PGGWLQ 52


>sp|MFNA_PYRFU|PROBABLE L-aspartate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RNPGGWVEKE 10
+ PG W+ +E
Sbjct: 315 KTPGAWLVRE 324


>sp|Y378_NANEQ|UPF0173 metal-dependent hydrolase NEQ378|Nanoarchaeum equitans (strain

Query: 2 NPGGWVEK 9
NPGG+V K
Sbjct: 112 NPGGFVIK 119


>sp|RLME_PICTO|RIBOSOMAL RNA large subunit methyltransferase|Picrophilus torridus (strain

Query: 2 NPGGWVE 8
+PGGW +
Sbjct: 46 SPGGWTQ 52


>sp|RL6_METKA|LARGE ribosomal subunit protein uL6|Methanopyrus kandleri (strain AV19

Query: 1 RNPGGWVEKETYY 13
+ P G V KE YY
Sbjct: 46 KGPKGEVTKEFYY 58


>sp|Y1798_ARCFU|PUTATIVE phosphate permease AF_1798|Archaeoglobus fulgidus (strain ATCC

Query: 4 GGWVEKETYY 13
G W+ TYY
Sbjct: 92 GFWITISTYY 101


>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 1 RNPGGWVEKET 11
+ PG VEK T
Sbjct: 345 KGPGSLVEKAT 355


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RNPGGWVEKET 11
+ PG VEK T
Sbjct: 345 KGPGSLVEKAT 355


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 GGWVEKETYY 13
G WV+KE Y
Sbjct: 144 GFWVDKENSY 153


>sp|RLME_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 3 PGGWVE 8
PGGW +
Sbjct: 51 PGGWTQ 56


>sp|MSRA_METMA|PEPTIDE methionine sulfoxide reductase MsrA|Methanosarcina mazei (strain

Query: 2 NPGGWVEKETY 12
NPG +EK T+
Sbjct: 46 NPGEGLEKATF 56


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RNPGGWVEKETY 12
R WVE+E +
Sbjct: 526 RKTDSWVEEEAF 537


>sp|RL39_CALMQ|LARGE ribosomal subunit protein eL39|Caldivirga maquilingensis (strain

Query: 1 RNPGGWVEKET 11
RNP WV +T
Sbjct: 21 RNPPAWVMVKT 31


>sp|HIS4_PYRFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Pyrococcus furiosus (strain ATCC

Query: 5 GWVEKET 11
GW+E+E+
Sbjct: 137 GWIEEES 143


>sp|DTDA_AERPE|D-AMINOACYL-TRNA deacylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RNPGGW 6
RNP GW
Sbjct: 165 RNPLGW 170


>sp|UPP_AERPE|URACIL phosphoribosyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 5 GWVEKE 10
GWVE+E
Sbjct: 52 GWVEEE 57


>sp|MSRA_METAC|PEPTIDE methionine sulfoxide reductase MsrA|Methanosarcina acetivorans

Query: 2 NPGGWVEKETY 12
NPG +EK T+
Sbjct: 23 NPGEGLEKATF 33


>sp|RLME_METJA|RIBOSOMAL RNA large subunit methyltransferase|Methanocaldococcus jannaschii

Query: 3 PGGWVE 8
PGGW++
Sbjct: 57 PGGWMQ 62


>sp|BGAL_SACS2|BETA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 3 PGGWVEKETYY 13
P GW+ T Y
Sbjct: 171 PSGWLSTRTVY 181


>sp|Y1471_METMP|UNCHARACTERIZED protein MMP1471|Methanococcus maripaludis (strain DSM 14266

Query: 3 PGGWVEKET 11
P G++E+ET
Sbjct: 139 PRGYIEEET 147


>sp|ACDG1_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 5 GWVEK 9
GWVEK
Sbjct: 459 GWVEK 463


>sp|MTAD2_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PGGWVEKET 11
PG W+E T
Sbjct: 323 PGHWLEMAT 331


>sp|Y524_METJA|UNCHARACTERIZED protein MJ0524|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 WVEKETYY 13
W++ +TYY
Sbjct: 104 WIKDKTYY 111


>sp|NADB_PYRHO|L-ASPARTATE oxidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NPGGWVEKETY 12
+P G++ K TY
Sbjct: 213 HPTGFIGKRTY 223


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 3 PGGWVEKETYY 13
P GW+ T Y
Sbjct: 174 PTGWLNSRTVY 184


>sp|FPOC_METMA|F(420)H(2) dehydrogenase subunit C|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GGWVEKETY 12
W E+ETY
Sbjct: 106 ANWYERETY 114






THE END