1|Sequence|1|10|MSADSSPLVG
>sp|DUT_HHV8P|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 8 type P
Query: 1 MSADSSPL 8
M +DS+PL
Sbjct: 1 MQSDSAPL 8
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 MSADSSPLV 9
+S DS+P+V
Sbjct: 343 VSEDSTPVV 351
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 5 SSPLVG 10
SSPL+G
Sbjct: 1738 SSPLIG 1743
2|Sequence|6|15|SPLVGSTPTG
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 1 SPLVGSTP 8
SPLV +TP
Sbjct: 247 SPLVSATP 254
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 SPLVGSTP 8
SPLV TP
Sbjct: 247 SPLVSVTP 254
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 1 SPLVGSTP 8
SPLV TP
Sbjct: 247 SPLVSVTP 254
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 SPLVGSTP 8
SPLV TP
Sbjct: 247 SPLVSVTP 254
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 SPLVGSTP 8
SPLV TP
Sbjct: 247 SPLVSVTP 254
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 LVGSTPT 9
LVG+TPT
Sbjct: 2361 LVGATPT 2367
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 LVGSTPT 9
LVG+TPT
Sbjct: 2361 LVGATPT 2367
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 SPLVGSTPT 9
+ LVG+TPT
Sbjct: 2359 ASLVGATPT 2367
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 SPLVGSTPT 9
+ LVG+TPT
Sbjct: 2360 TSLVGATPT 2368
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 LVGSTPT 9
LVG+TPT
Sbjct: 2361 LVGATPT 2367
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 LVGSTPT 9
LVG+TPT
Sbjct: 2361 LVGATPT 2367
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 LVGSTPT 9
L+G+TPT
Sbjct: 2361 LIGATPT 2367
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 LVGSTPT 9
L+G+TPT
Sbjct: 2361 LIGATPT 2367
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 SPLVGSTPTG 10
SPLV P+G
Sbjct: 1919 SPLVTDDPSG 1928
>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United
Query: 1 SPLVGSTPT 9
SPL+ + PT
Sbjct: 241 SPLIQTLPT 249
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 4 VGSTPT 9
VGSTPT
Sbjct: 80 VGSTPT 85
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 1 SPLVGSTP 8
S +VG TP
Sbjct: 331 SEIVGDTP 338
3|Sequence|11|20|STPTGYGTLT
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 2 TPTGYGTL 9
TP G+GTL
Sbjct: 89 TPQGHGTL 96
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TGYGTLT 10
TGYGT+T
Sbjct: 456 TGYGTIT 462
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 STPTGYGTLT 10
TP+ YGT+T
Sbjct: 2362 ETPSSYGTVT 2371
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 STPTGYGTLT 10
TP+ YGT+T
Sbjct: 2389 ETPSSYGTVT 2398
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 STPTGYGTLT 10
TP+ YGT+T
Sbjct: 2367 ETPSSYGTVT 2376
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 STPTGYGTLT 10
S P YGT+T
Sbjct: 891 SKPLDYGTIT 900
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 STPTGYGTLT 10
S P YGT+T
Sbjct: 891 SKPLDYGTIT 900
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TGYGTLT 10
TGYGT+T
Sbjct: 456 TGYGTVT 462
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TGYGTLT 10
TGYGT+T
Sbjct: 456 TGYGTVT 462
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 TGYGTLT 10
TGYGT+T
Sbjct: 456 TGYGTVT 462
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TGYGTLT 10
TGYGT+T
Sbjct: 456 TGYGTVT 462
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TGYGTLT 10
TGYGT+T
Sbjct: 456 TGYGTVT 462
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TGYGTLT 10
TGYGT+T
Sbjct: 176 TGYGTVT 182
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TGYGTLT 10
TGYGT+T
Sbjct: 456 TGYGTVT 462
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 690 ATPTGWG 696
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TGYGTLT 10
TGYGT+T
Sbjct: 225 TGYGTVT 231
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 700 ATPTGWG 706
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 690 ATPTGWG 696
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 690 ATPTGWG 696
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 690 ATPTGWG 696
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|C22L_VACCC|TRUNCATED CrmB protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TPTGYGTLT 10
TP G GT T
Sbjct: 61 TPCGSGTFT 69
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 700 ATPTGWG 706
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 700 ATPTGWG 706
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 690 ATPTGWG 696
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 700 ATPTGWG 706
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 690 ATPTGWG 696
>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)
Query: 1 STPTGYG 7
+ PTGYG
Sbjct: 110 TEPTGYG 116
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TGYGTLT 10
TGYGT+T
Sbjct: 456 TGYGTVT 462
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 TGYGTLT 10
TGYGT+T
Sbjct: 176 TGYGTVT 182
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TGYGTLT 10
TGYGT+T
Sbjct: 356 TGYGTVT 362
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 TGYGTLT 10
TGYGT+T
Sbjct: 176 TGYGTVT 182
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 3 PTGYGTL 9
P G+GTL
Sbjct: 21 PKGHGTL 27
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 STPTGYGT 8
P+GYGT
Sbjct: 156 ENPSGYGT 163
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 GYGTLT 10
GYGT+T
Sbjct: 376 GYGTIT 381
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TPTGYGTL 9
TPTG+ L
Sbjct: 230 TPTGFALL 237
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 703 ATPTGWG 709
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 703 ATPTGWG 709
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 703 ATPTGWG 709
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 700 ATPTGWG 706
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 696 ATPTGWG 702
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 700 ATPTGWG 706
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 700 ATPTGWG 706
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 703 ATPTGWG 709
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 703 ATPTGWG 709
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 GYGTLT 10
GYGT+T
Sbjct: 382 GYGTIT 387
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 690 ATPTGWG 696
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 696 ATPTGWG 702
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 696 ATPTGWG 702
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 703 ATPTGWG 709
>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)
Query: 2 TPTGYGTL 9
TP YG+L
Sbjct: 51 TPDTYGSL 58
>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TPTGYGTL 9
TP YG+L
Sbjct: 51 TPDTYGSL 58
>sp|PG115_VACCA|CORE protein OPG115|Vaccinia virus (strain Ankara) (VACV)
Query: 2 TPTGYGTL 9
TP YG+L
Sbjct: 51 TPDTYGSL 58
>sp|PG115_MONPV|CORE protein OPG115|Monkeypox virus (MPXV)
Query: 2 TPTGYGTL 9
TP YG+L
Sbjct: 51 TPDTYGSL 58
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|D3_VARV|CORE protein D3|Variola virus
Query: 2 TPTGYGTL 9
TP YG+L
Sbjct: 51 TPDTYGSL 58
>sp|D3_VAR67|CORE protein D3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 TPTGYGTL 9
TP YG+L
Sbjct: 51 TPDTYGSL 58
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 STPTGYG 7
+TPTG+G
Sbjct: 701 ATPTGWG 707
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 STPTGYGTL 9
S P YGT
Sbjct: 297 SVPVSYGTF 305
>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /
Query: 2 TPTGYGTLT 10
TP G GT T
Sbjct: 68 TPCGSGTFT 76
>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus
Query: 2 TPTGYGTLT 10
TP G GT T
Sbjct: 66 TPCGSGTFT 74
>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate
Query: 2 TPTGYGTLT 10
TP G GT T
Sbjct: 66 TPCGSGTFT 74
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 2 TPTGYG 7
TPTG+G
Sbjct: 444 TPTGHG 449
>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United
Query: 6 YGTLT 10
YGTLT
Sbjct: 186 YGTLT 190
4|Sequence|16|25|YGTLTIGTSI
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 YGTLTIGT 8
YG LT+GT
Sbjct: 2652 YGILTLGT 2659
>sp|U16_HHV6U|PROTEIN U17/U16|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YGTLTIGTSI 10
YG TIGT I
Sbjct: 260 YGIDTIGTGI 269
>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)
Query: 1 YGTLTIGTSI 10
YG TIGT I
Sbjct: 260 YGIDTIGTGI 269
>sp|U16_HHV6G|PROTEIN U17/U16|Human herpesvirus 6A (strain GS)
Query: 1 YGTLTIGTSI 10
YG TIGT I
Sbjct: 260 YGIDTIGTGI 269
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 YGTLTIG 7
YGT TIG
Sbjct: 6526 YGTATIG 6532
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 TLTIGTSI 10
T TIGTS+
Sbjct: 1007 THTIGTSV 1014
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 TLTIGTSI 10
T TIGTS+
Sbjct: 1007 THTIGTSV 1014
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 TLTIGTSI 10
T TIGTS+
Sbjct: 1007 THTIGTSV 1014
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 TLTIGTSI 10
T TIGTS+
Sbjct: 1007 THTIGTSV 1014
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 TLTIGTSI 10
T TIGTS+
Sbjct: 1007 THTIGTSV 1014
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 TLTIGTSI 10
T TIGTS+
Sbjct: 1007 THTIGTSV 1014
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 TLTIGTSI 10
T TIGTS+
Sbjct: 1007 THTIGTSV 1014
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 TLTIGTSI 10
T TIGTS+
Sbjct: 1007 THTIGTSV 1014
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 TLTIGTSI 10
T TIGTS+
Sbjct: 1007 THTIGTSV 1014
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 3 TLTIGTSI 10
T TIGTS+
Sbjct: 1007 THTIGTSV 1014
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 TIGTSI 10
T+GTSI
Sbjct: 2461 TVGTSI 2466
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 TIGTSI 10
T+GTSI
Sbjct: 2461 TVGTSI 2466
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 TIGTSI 10
T+GTSI
Sbjct: 2453 TVGTSI 2458
>sp|UL04_HCMVA|EARLY glycoprotein GP48|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YGTLTIGTS 9
+GT +IGT+
Sbjct: 24 FGTCSIGTT 32
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 YGTLTIGT 8
YG L +GT
Sbjct: 183 YGDLRVGT 190
5|Sequence|21|30|IGTSIDPLSS
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 3 TSIDPLSS 10
+SIDPL +
Sbjct: 83 SSIDPLEA 90
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 2 GTSIDPLSS 10
GT ++P+SS
Sbjct: 205 GTGLEPISS 213
>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29
Query: 2 GTSIDPLSS 10
GT ++P+SS
Sbjct: 205 GTGLEPISS 213
6|Sequence|26|35|DPLSSSVSSV
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 1 DPLSSSVSSV 10
DP+ SVSSV
Sbjct: 108 DPVEPSVSSV 117
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 1 DPLSSSVSSV 10
DPL + SS+
Sbjct: 308 DPLDTPYSSI 317
7|Sequence|31|40|SVSSVRLSGY
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 3 SSVRLSGY 10
SS+ +SGY
Sbjct: 232 SSINISGY 239
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 3 SSVRLSGY 10
SS+ +SGY
Sbjct: 233 SSINISGY 240
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 3 SSVRLSGY 10
SS+ +SGY
Sbjct: 233 SSINISGY 240
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 SSVRLSGY 10
SS+ +SGY
Sbjct: 232 SSINISGY 239
8|Sequence|36|45|RLSGYCGSPW
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 2 LSGYCGSP 9
+ G+CG P
Sbjct: 278 MEGFCGKP 285
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 6 CGSPW 10
CG PW
Sbjct: 675 CGEPW 679
Query: 2 LSGYCGSP 9
++G CGSP
Sbjct: 3079 INGACGSP 3086
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 6 CGSPW 10
CG PW
Sbjct: 675 CGEPW 679
Query: 2 LSGYCGSP 9
++G CGSP
Sbjct: 3079 INGACGSP 3086
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 LSGYCGSP 9
++G CGSP
Sbjct: 3105 INGACGSP 3112
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 LSGYCGSP 9
++G CGSP
Sbjct: 3105 INGACGSP 3112
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 SGYCG 7
SGYCG
Sbjct: 1651 SGYCG 1655
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 166 RSASFCGSPY 175
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 166 RSASFCGSPY 175
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 166 RSASFCGSPY 175
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 166 RSASFCGSPY 175
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 166 RSASFCGSPY 175
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 166 RSASFCGSPY 175
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 166 RSASFCGSPY 175
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 166 RSASFCGSPY 175
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 1 RLSGYCGSPW 10
R + +CGSP+
Sbjct: 164 RSASFCGSPY 173
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 SGYCG 7
SGYCG
Sbjct: 1658 SGYCG 1662
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 SGYCG 7
SGYCG
Sbjct: 1658 SGYCG 1662
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 SGYCG 7
SGYCG
Sbjct: 1654 SGYCG 1658
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RLSGYCGS 8
RL+G+C S
Sbjct: 122 RLAGFCAS 129
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RLSGYCGS 8
RL+G+C S
Sbjct: 122 RLAGFCAS 129
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RLSGYCGS 8
RL+G+C S
Sbjct: 122 RLAGFCAS 129
>sp|CAPSD_HCYV5|CAPSID protein|Human associated cyclovirus 1 (isolate
Query: 2 LSGYCGSPW 10
+ YC PW
Sbjct: 100 IPAYCMFPW 108
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 LSGYCGS 8
LSGYC +
Sbjct: 20 LSGYCSN 26
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 2 LSGYCGS 8
LSGYC +
Sbjct: 20 LSGYCSN 26
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 5 YCGSP 9
YCG+P
Sbjct: 1197 YCGAP 1201
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 SGYCGSPW 10
S YC PW
Sbjct: 1808 SLYCMLPW 1815
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 SGYCGSPW 10
S YC PW
Sbjct: 1808 SLYCMLPW 1815
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 SGYCGSPW 10
S YC PW
Sbjct: 1808 SLYCMLPW 1815
>sp|DUT_HHV8P|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 8 type P
Query: 1 RLSGYCGSPW 10
+ Y G PW
Sbjct: 201 KFYNYSGQPW 210
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SGYCGSPW 10
+ +CGSP+
Sbjct: 166 ASFCGSPY 173
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SGYCGSPW 10
+ +CGSP+
Sbjct: 166 ASFCGSPY 173
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SGYCGSPW 10
+ +CGSP+
Sbjct: 166 ASFCGSPY 173
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SGYCGSPW 10
+ +CGSP+
Sbjct: 166 ASFCGSPY 173
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SGYCGSPW 10
+ +CGSP+
Sbjct: 166 ASFCGSPY 173
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 6 CGSPW 10
CGSP+
Sbjct: 1890 CGSPY 1894
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 6 CGSPW 10
CGSP+
Sbjct: 1920 CGSPY 1924
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SGYCGSPW 10
+ +CGSP+
Sbjct: 166 ASFCGSPY 173
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 3 SGYCGSPW 10
+ +CGSP+
Sbjct: 166 ASFCGSPY 173
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 6 CGSPW 10
CGSP+
Sbjct: 1870 CGSPY 1874
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 3 SGYCGSPW 10
+ +CGSP+
Sbjct: 166 ASFCGSPY 173
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 LSGYCGSP 9
G CGSP
Sbjct: 1913 FEGLCGSP 1920
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 3 SGYCGSPW 10
+ +CGSP+
Sbjct: 166 ASFCGSPY 173
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 SGYCGSPW 10
+ +CGSP+
Sbjct: 166 ASFCGSPY 173
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 6 CGSPW 10
CGSP+
Sbjct: 1920 CGSPY 1924
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SGYCGSPW 10
+ +CGSP+
Sbjct: 166 ASFCGSPY 173
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 SGYCGSPW 10
+ +CGSP+
Sbjct: 166 ASFCGSPY 173
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 6 CGSPW 10
CGSP+
Sbjct: 1870 CGSPY 1874
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 6 CGSPW 10
CGSP+
Sbjct: 1890 CGSPY 1894
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 SGYCGSPW 10
+ +CGSP+
Sbjct: 166 ASFCGSPY 173
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 LSGYCGSPW 10
+ G CG+P+
Sbjct: 1235 IPGDCGAPY 1243
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 LSGYCGSPW 10
+ G CG+P+
Sbjct: 1234 IPGDCGAPY 1242
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 SGYCG 7
+GYCG
Sbjct: 1665 AGYCG 1669
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 RLSGYCGSP 9
R+ YCG P
Sbjct: 304 RILLYCGLP 312
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 YCGSPW 10
+CGSP+
Sbjct: 2 FCGSPF 7
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 LSGYCGS 8
L+G CGS
Sbjct: 3404 LNGSCGS 3410
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LSGYCGS 8
L+G CGS
Sbjct: 3404 LNGSCGS 3410
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LSGYCGS 8
L+G CGS
Sbjct: 3381 LNGSCGS 3387
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 LSGYCGS 8
L+G CGS
Sbjct: 3381 LNGSCGS 3387
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 LSGYCGSP 9
G CGSP
Sbjct: 1848 FQGLCGSP 1855
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 4 GYCGSPW 10
G CG+P+
Sbjct: 1169 GDCGTPY 1175
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 LSGYCGSP 9
G CGSP
Sbjct: 1845 FQGLCGSP 1852
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 4 GYCGSPW 10
GYC + W
Sbjct: 283 GYCLTKW 289
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 RLSGYCGS 8
RLS CGS
Sbjct: 1215 RLSYSCGS 1222
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 RLSGYCGSP 9
RLSG G P
Sbjct: 443 RLSGIYGLP 451
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 RLSGYCGSP 9
RLSG G P
Sbjct: 442 RLSGIYGLP 450
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 RLSGYCGSP 9
RLSG G P
Sbjct: 443 RLSGIYGLP 451
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 3 SGYCG 7
SG+CG
Sbjct: 1114 SGFCG 1118
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 5 YCGSPW 10
YC SP+
Sbjct: 437 YCDSPF 442
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 2 LSGYCGSPW 10
L CGSP+
Sbjct: 446 LIALCGSPF 454
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 4 GYCGSPW 10
GYC + W
Sbjct: 283 GYCLTKW 289
9|Sequence|41|50|CGSPWRVIGY
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CGSPWRVIGY 10
CG PW + Y
Sbjct: 675 CGEPWFLTDY 684
Query: 2 GSPWRVI 8
G PW ++
Sbjct: 5723 GQPWLIV 5729
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CGSPWRVIGY 10
CG PW + Y
Sbjct: 675 CGEPWFLTDY 684
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 GSPWRVI 8
GSPWR +
Sbjct: 1077 GSPWRFL 1083
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 GSPWRVI 8
GSPWR +
Sbjct: 1065 GSPWRFL 1071
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 GSPWRVI 8
GSPWR +
Sbjct: 1076 GSPWRFL 1082
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 GSPWRVI 8
GSPWR +
Sbjct: 1072 GSPWRFL 1078
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 GSPWRVI 8
GSPWR +
Sbjct: 1072 GSPWRFL 1078
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 GSPWRVI 8
GSPWR +
Sbjct: 1068 GSPWRFL 1074
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 GSPWRVI 8
GSPWR +
Sbjct: 1081 GSPWRFL 1087
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 5 WRVIGY 10
W++IGY
Sbjct: 2235 WKIIGY 2240
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 5 WRVIGY 10
W++IGY
Sbjct: 2235 WKIIGY 2240
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain
Query: 1 CGSPW 5
C SPW
Sbjct: 88 CSSPW 92
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 CGSPW 5
C SPW
Sbjct: 88 CSSPW 92
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 1 CGSPWRVIG 9
C S W+ +G
Sbjct: 343 CSSAWKWLG 351
>sp|PG067_VARV|PROTEIN OPG067|Variola virus
Query: 5 WRVIG 9
WR+IG
Sbjct: 196 WRIIG 200
>sp|PG067_VAR67|PROTEIN OPG067|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 WRVIG 9
WR+IG
Sbjct: 196 WRIIG 200
>sp|PG067_VACCD|PROTEIN OPG067|Vaccinia virus (strain Dairen I)
Query: 5 WRVIG 9
WR+IG
Sbjct: 196 WRIIG 200
>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 WRVIG 9
WR+IG
Sbjct: 196 WRIIG 200
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 3 SPWRVIGY 10
S WR IG+
Sbjct: 1196 SMWRRIGF 1203
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GSPWRVIG 9
+PW V+G
Sbjct: 267 ATPWYVLG 274
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GSPWRVIG 9
+PW V+G
Sbjct: 267 ATPWYVLG 274
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 GSPWRVI 8
G PW V+
Sbjct: 5748 GQPWSVL 5754
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 GSPWRV 7
G+PW++
Sbjct: 1462 GAPWKI 1467
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 GSPWRV 7
G+PW++
Sbjct: 1466 GAPWKI 1471
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 GSPWRV 7
G+PW++
Sbjct: 1466 GAPWKI 1471
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 CGSPW 5
C SPW
Sbjct: 747 CQSPW 751
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 CGSPW 5
C SPW
Sbjct: 747 CQSPW 751
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 CGSPW 5
C SPW
Sbjct: 747 CQSPW 751
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 GSPWRVI 8
G PW V+
Sbjct: 6081 GLPWNVV 6087
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 GSPWRVI 8
G PW V+
Sbjct: 6058 GLPWNVV 6064
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 GSPWR 6
G PWR
Sbjct: 1584 GGPWR 1588
Query: 2 GSPWRV 7
G PW+V
Sbjct: 1465 GVPWKV 1470
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 GSPWR 6
G PWR
Sbjct: 1584 GGPWR 1588
Query: 2 GSPWRV 7
G PW+V
Sbjct: 1465 GVPWKV 1470
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 SPWR 6
SPWR
Sbjct: 1085 SPWR 1088
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 SPWRVIG 9
+P+RV+G
Sbjct: 183 TPYRVLG 189
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 GSPWR 6
G PWR
Sbjct: 1584 GGPWR 1588
Query: 2 GSPWRV 7
G PW+V
Sbjct: 1465 GVPWKV 1470
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 SPWR 6
SPWR
Sbjct: 1095 SPWR 1098
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 GSPWRVIG 9
G PW +G
Sbjct: 2076 GYPWNTLG 2083
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 GSPWR 6
G PWR
Sbjct: 611 GRPWR 615
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 GSPWR 6
G PWR
Sbjct: 1584 GGPWR 1588
Query: 2 GSPWRV 7
G PW+V
Sbjct: 1465 GVPWKV 1470
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 SPWR 6
SPWR
Sbjct: 1090 SPWR 1093
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 GSPWRVIG 9
G PW++ G
Sbjct: 1583 GGPWKLEG 1590
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 GSPWR 6
G PWR
Sbjct: 611 GRPWR 615
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 GSPWR 6
G PWR
Sbjct: 611 GRPWR 615
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 SPWR 6
SPWR
Sbjct: 1087 SPWR 1090
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 SPWR 6
SPWR
Sbjct: 1089 SPWR 1092
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 SPWR 6
SPWR
Sbjct: 1078 SPWR 1081
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 SPWR 6
SPWR
Sbjct: 1081 SPWR 1084
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 SPWR 6
SPWR
Sbjct: 1077 SPWR 1080
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 SPWR 6
SPWR
Sbjct: 1076 SPWR 1079
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 SPWR 6
SPWR
Sbjct: 1079 SPWR 1082
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 SPWR 6
SPWR
Sbjct: 1079 SPWR 1082
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 SPWR 6
SPWR
Sbjct: 1079 SPWR 1082
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 5 WRVIG 9
WRV+G
Sbjct: 88 WRVLG 92
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 5 WRVIG 9
WRV+G
Sbjct: 88 WRVLG 92
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 5 WRVIG 9
WRV+G
Sbjct: 88 WRVLG 92
>sp|NEF_HV2BE|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 SPWR 6
SPWR
Sbjct: 68 SPWR 71
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 GSPWRV 7
G PW+V
Sbjct: 1393 GVPWKV 1398
>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)
Query: 2 GSPWRVIGY 10
G W+ +G+
Sbjct: 284 GEEWKRVGF 292
>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)
Query: 2 GSPWRVIGY 10
G W+ +G+
Sbjct: 284 GEEWKRVGF 292
>sp|EBNA2_EBVB9|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GSPWR 6
G PWR
Sbjct: 368 GGPWR 372
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CGSPWRVIGY 10
CG V GY
Sbjct: 112 CGETREVFGY 121
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 2 GSPWR 6
G PWR
Sbjct: 591 GVPWR 595
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 2 GSPWR 6
G PWR
Sbjct: 591 GVPWR 595
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CGSPWRVIGY 10
CG V GY
Sbjct: 112 CGETREVFGY 121
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CGSPWRVIGY 10
CG V GY
Sbjct: 112 CGETREVFGY 121
>sp|EBNA2_EBVG|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GSPWR 6
G PWR
Sbjct: 332 GGPWR 336
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 2 GSPWRVI 8
G PWR +
Sbjct: 225 GRPWRSV 231
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 GSPWRV 7
G PW++
Sbjct: 1464 GVPWKI 1469
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 2 GSPWRVI 8
G PWR +
Sbjct: 225 GRPWRSV 231
10|Sequence|46|55|RVIGYHVVVW
>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4
Query: 4 GYHVVVW 10
GY V VW
Sbjct: 114 GYDVAVW 120
>sp|PG172_VACCC|PROTEIN A43|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VIGYHVVVW 10
+IGY ++W
Sbjct: 147 IIGYDSIIW 155
>sp|PG172_VARV|PROTEIN A43|Variola virus
Query: 2 VIGYHVVVW 10
+IGY ++W
Sbjct: 148 IIGYDSIIW 156
>sp|PG172_VAR67|PROTEIN A43|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 VIGYHVVVW 10
+IGY ++W
Sbjct: 148 IIGYDSIIW 156
>sp|PG172_MONPV|PROTEIN OPG172|Monkeypox virus (MPXV)
Query: 2 VIGYHVVVW 10
+IGY ++W
Sbjct: 149 IIGYDSIIW 157
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 4 GYHVVVW 10
GY V VW
Sbjct: 114 GYDVSVW 120
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 4 GYHVV 8
GYHVV
Sbjct: 517 GYHVV 521
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 5 YHVVVW 10
+H++VW
Sbjct: 649 HHLIVW 654
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RVIGYHVV 8
RV+G HV+
Sbjct: 16 RVVGMHVL 23
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 RVIGYHVVV 9
R+IGY+ ++
Sbjct: 82 RIIGYYPLI 90
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RVIGYHVV 8
R++G H+V
Sbjct: 102 RIVGRHLV 109
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RVIGYHVV 8
RV+G HV+
Sbjct: 16 RVVGMHVL 23
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RVIGYHVV 8
R++G H+V
Sbjct: 102 RIVGRHLV 109
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 RVIGYHVVV 9
R+IG ++VV
Sbjct: 559 RMIGQYIVV 567
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 RVIGYHVVV 9
R+IG ++VV
Sbjct: 559 RMIGQYIVV 567
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 4 GYHVV 8
GYH+V
Sbjct: 517 GYHIV 521
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 4 GYHVV 8
GYH+V
Sbjct: 517 GYHIV 521
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 4 GYHVV 8
GYH+V
Sbjct: 517 GYHIV 521
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 4 GYHVV 8
GYH+V
Sbjct: 517 GYHIV 521
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 GYHVV 8
GYH+V
Sbjct: 517 GYHIV 521
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 4 GYHVV 8
GYH+V
Sbjct: 517 GYHIV 521
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 RVIGYHV 7
+VIG HV
Sbjct: 1718 KVIGMHV 1724
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 RVIGYHV 7
+VIG HV
Sbjct: 1718 KVIGMHV 1724
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 RVIGYHV 7
+VIG HV
Sbjct: 1719 KVIGMHV 1725
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 RVIGYHV 7
+VIG HV
Sbjct: 1719 KVIGMHV 1725
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 RVIGYHV 7
+VIG HV
Sbjct: 1721 KVIGMHV 1727
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 RVIGYHV 7
+VIG HV
Sbjct: 1721 KVIGMHV 1727
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 RVIGYHV 7
+VIG HV
Sbjct: 1726 KVIGMHV 1732
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 RVIGYHV 7
+VIG HV
Sbjct: 1718 KVIGMHV 1724
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 4 GYHVVVW 10
GY V VW
Sbjct: 116 GYTVNVW 122
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 4 GYHVVVW 10
G H+ VW
Sbjct: 114 GQHIEVW 120
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 RVIGYHV 7
+VIG HV
Sbjct: 1710 KVIGIHV 1716
>sp|BM2_INBLE|MATRIX protein 2|Influenza B virus (strain B/Lee/1940)
Query: 2 VIGYHVVV 9
V+G H+VV
Sbjct: 80 VLGDHIVV 87
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 VIGYHVVVW 10
V+G+ ++ W
Sbjct: 816 VVGFGIIGW 824
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 1 RVIGYHVVVW 10
++ GY ++W
Sbjct: 73 KIKGYDSIIW 82
>sp|U148A_HCMVM|PROTEIN UL148A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GYHVVVW 10
G HV +W
Sbjct: 27 GLHVYLW 33
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 2 VIGYHVVVW 10
V+G+ ++ W
Sbjct: 816 VVGFGIIGW 824
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 5 YHVVVW 10
YH+ W
Sbjct: 207 YHLAAW 212
11|Sequence|51|60|HVVVWMMAGI
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 1 HVVVWMMAGI 10
H V W AG+
Sbjct: 560 HAVAWSQAGV 569
>sp|ICP34_HHV1N|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain MGH-10)
Query: 1 HVVVWMMAG 9
H+VVW A
Sbjct: 185 HLVVWASAA 193
>sp|ICP34_HHV1D|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain CVG-2)
Query: 1 HVVVWMMAG 9
H+VVW A
Sbjct: 192 HLVVWASAA 200
>sp|ICP34_HHV11|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain 17)
Query: 1 HVVVWMMAG 9
H+VVW A
Sbjct: 188 HLVVWASAA 196
>sp|ICP34_HHV1F|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain F)
Query: 1 HVVVWMMAG 9
H+VVW A
Sbjct: 203 HLVVWASAA 211
>sp|M2_I97A1|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I97A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I96A0|MATRIX protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I89A2|MATRIX protein 2|Influenza A virus (strain A/Beijing/353/1989
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I88A5|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I88A3|MATRIX protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I85A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I83A8|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I83A1|MATRIX protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I82A9|MATRIX protein 2|Influenza A virus (strain A/Philippines/2/1982
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I82A7|MATRIX protein 2|Influenza A virus (strain A/Swine/Hong
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I81A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I80AA|MATRIX protein 2|Influenza A virus (strain A/India/6263/1980
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I80A4|MATRIX protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I79A0|MATRIX protein 2|Influenza A virus (strain A/Bangkok/1/1979
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I78A8|MATRIX protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I78A7|MATRIX protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I78A3|MATRIX protein 2|Influenza A virus (strain A/Mallard/New
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I77AB|MATRIX protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I77AA|MATRIX protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I77A9|MATRIX protein 2|Influenza A virus (strain A/Equine/New
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I77A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I76A6|MATRIX protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I75A0|MATRIX protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I73A5|MATRIX protein 2|Influenza A virus (strain A/Port
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I72A8|MATRIX protein 2|Influenza A virus (strain A/Udorn/1972
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I72A4|MATRIX protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I72A3|MATRIX protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I72A2|MATRIX protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I71A1|MATRIX protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I70A0|MATRIX protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I69A0|MATRIX protein 2|Influenza A virus (strain A/England/878/1969
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I68A6|MATRIX protein 2|Influenza A virus (strain A/Northern
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I68A4|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I68A0|MATRIX protein 2|Influenza A virus (strain A/Aichi/2/1968
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I67A2|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I67A0|MATRIX protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I61A1|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I59A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I57A5|MATRIX protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I57A3|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I57A2|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I57A1|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I57A0|MATRIX protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I54A2|MATRIX protein 2|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I54A1|MATRIX protein 2|Influenza A virus (strain A/Swine/May/1954
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I51A0|MATRIX protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I50A0|MATRIX protein 2|Influenza A virus (strain A/Fort
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I45A0|MATRIX protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I43A0|MATRIX protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I40A0|MATRIX protein 2|Influenza A virus (strain A/Hickox/1940
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I37A0|MATRIX protein 2|Influenza A virus (strain A/Swine/29/1937
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I36A0|MATRIX protein 2|Influenza A virus (strain A/Henry/1936
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I35A3|MATRIX protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I34A1|MATRIX protein 2|Influenza A virus (strain A/Puerto
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I33A0|MATRIX protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I30A0|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I18A0|MATRIX protein 2|Influenza A virus (strain A/Brevig
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I05A1|MATRIX protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I03A1|MATRIX protein 2|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I02A7|MATRIX protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 35 HLILWIL 41
>sp|M2_I02A6|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I02A5|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I02A4|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I02A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I02A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I02A1|MATRIX protein 2|Influenza A virus (strain A/Guinea
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 30 HLILWIL 36
>sp|M2_I02A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I01A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I01A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 40 HLILWIL 46
>sp|M2_I01A1|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I01A0|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I00A0|MATRIX protein 2|Influenza A virus (strain A/Duck/Hong
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 HVVVW 5
H++VW
Sbjct: 650 HLIVW 654
>sp|M2_I85A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I88A7|MATRIX protein 2|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|VPU_HV1RH|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 2 VVVWMMAGI 10
+VVW + GI
Sbjct: 20 IVVWTIVGI 28
>sp|M2_I80A2|MATRIX protein 2|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I03A0|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I77AC|MATRIX protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|M2_I60A0|MATRIX protein 2|Influenza A virus (strain A/Ann
Query: 1 HVVVWMM 7
H+++W++
Sbjct: 37 HLILWIL 43
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 3 VVWMMAGI 10
+VW AG+
Sbjct: 123 LVWACAGV 130
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 3 VVWMMAGI 10
+VW AG+
Sbjct: 159 LVWACAGV 166
12|Sequence|56|65|MMAGIPLLLF
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 MMAGIP 6
+MAGIP
Sbjct: 62 LMAGIP 67
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 1 MMAGIPLLL 9
+ +GIP+LL
Sbjct: 106 VQSGIPILL 114
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 MMAGIP 6
+MAG+P
Sbjct: 62 LMAGVP 67
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 MMAGIP 6
+MAG+P
Sbjct: 62 LMAGVP 67
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 MMAGIP 6
+MAG+P
Sbjct: 62 LMAGVP 67
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 1 MMAGIP 6
+MAG+P
Sbjct: 62 LMAGVP 67
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 MMAGIP 6
+MAG+P
Sbjct: 62 LMAGVP 67
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 5 IPLLLF 10
IPL+LF
Sbjct: 1919 IPLILF 1924
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 5 IPLLLF 10
IPL+LF
Sbjct: 1919 IPLILF 1924
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 5 IPLLLF 10
IPL+LF
Sbjct: 1919 IPLILF 1924
13|Sequence|61|70|PLLLFRWKPL
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 6 RWKPL 10
RWKPL
Sbjct: 280 RWKPL 284
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 6 RWKPL 10
RWKPL
Sbjct: 280 RWKPL 284
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 3 LLFRWKPL 10
LL RWKP+
Sbjct: 198 LLTRWKPV 205
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 1 PLLLFRW 7
PL+L +W
Sbjct: 185 PLILIKW 191
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 PLLLFRW 7
PL+L +W
Sbjct: 185 PLILIKW 191
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 PLLLFRW 7
PL+L +W
Sbjct: 185 PLILIKW 191
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 PLLLFRW 7
PL+L +W
Sbjct: 185 PLILIKW 191
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 1 PLLLFRWKPL 10
P L+ W+PL
Sbjct: 574 PSDLWNWEPL 583
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 1 PLLLFRWKPL 10
P L+ W+PL
Sbjct: 574 PSDLWNWEPL 583
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PLLLFRWKPL 10
P L+ W+PL
Sbjct: 574 PSDLWNWEPL 583
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PLLLFRWKPL 10
P L+ W+PL
Sbjct: 574 PSDLWNWEPL 583
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 PLLLFRWKPL 10
P L+ W+PL
Sbjct: 574 PSDLWNWEPL 583
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 4 LFRWKP 9
L+RW+P
Sbjct: 401 LYRWQP 406
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 4 LFRWKP 9
L+RW+P
Sbjct: 401 LYRWQP 406
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 4 LFRWKP 9
L+RW+P
Sbjct: 400 LYRWQP 405
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 4 LFRWKP 9
L+RW+P
Sbjct: 400 LYRWQP 405
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 6 RWKPL 10
RW+PL
Sbjct: 2292 RWEPL 2296
14|Sequence|66|75|RWKPLWGVRL
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 2 WKPLWGVR 9
W+ LW V+
Sbjct: 1069 WRMLWNVK 1076
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 2 WKPLW 6
W PLW
Sbjct: 258 WPPLW 262
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 5 LWGVR 9
LWGVR
Sbjct: 219 LWGVR 223
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 2 WKPLWGV 8
WK +W +
Sbjct: 1067 WKKMWSI 1073
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8])
Query: 2 WKPLWGV 8
WK +W +
Sbjct: 1067 WKKMWNI 1073
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 2 WKPLWGV 8
WK +W +
Sbjct: 1067 WKKMWNI 1073
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 WKPLWGV 8
WK +W +
Sbjct: 1067 WKKMWNI 1073
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 WKPLWGV 8
WK +W +
Sbjct: 1067 WKKMWNI 1073
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])
Query: 2 WKPLWGV 8
WK +W +
Sbjct: 1067 WKKMWNI 1073
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 WKPLWGV 8
WK +W +
Sbjct: 1067 WKKMWNI 1073
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 WKPLWGV 8
WK +W +
Sbjct: 1067 WKKMWNI 1073
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 WKPLWGV 8
WK +W +
Sbjct: 1067 WKKMWNI 1073
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 2 WKPLWGV 8
WK +W +
Sbjct: 1067 WKKMWNI 1073
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 WKPLWGV 8
WK +W +
Sbjct: 1067 WKKMWNI 1073
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 2 WKPLWGV 8
WK +W +
Sbjct: 1067 WKKMWNI 1073
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 WKPLWGV 8
WK +W +
Sbjct: 1067 WKKMWNI 1073
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 2 WKPLWGV 8
WK +W +
Sbjct: 1067 WKKMWNI 1073
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 5 LWGVR 9
LWGVR
Sbjct: 211 LWGVR 215
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 5 LWGVR 9
LWGVR
Sbjct: 211 LWGVR 215
>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)
Query: 1 RWKPLWG 7
RW+ WG
Sbjct: 255 RWREDWG 261
>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)
Query: 1 RWKPLWG 7
RW+ WG
Sbjct: 255 RWREDWG 261
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 WKPLWGVRL 10
WK GVR
Sbjct: 440 WKSFAGVRF 448
>sp|VP24_EBOZM|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 PLWGVRL 10
PLW +R+
Sbjct: 90 PLWALRV 96
>sp|VP24_EBOG4|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 4 PLWGVRL 10
PLW +R+
Sbjct: 90 PLWALRV 96
>sp|VP24_EBOZ5|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 PLWGVRL 10
PLW +R+
Sbjct: 90 PLWALRV 96
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 WKPLW 6
W+P+W
Sbjct: 326 WEPMW 330
>sp|ORF2_ZIKVK|UORF2 protein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 KPLWGV 8
+PLWG+
Sbjct: 34 EPLWGL 39
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 6 WGVRL 10
WGVRL
Sbjct: 243 WGVRL 247
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 6 WGVRL 10
WGVRL
Sbjct: 243 WGVRL 247
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 6 WGVRL 10
WGVRL
Sbjct: 243 WGVRL 247
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 6 WGVRL 10
WGVRL
Sbjct: 243 WGVRL 247
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 6 WGVRL 10
WGVRL
Sbjct: 243 WGVRL 247
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 6 WGVRL 10
WGVRL
Sbjct: 243 WGVRL 247
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 6 WGVRL 10
WGVRL
Sbjct: 243 WGVRL 247
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 WKPLWGVRL 10
W+ L+G R+
Sbjct: 718 WEQLFGARV 726
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 2 WKPLWGVRL 10
W+ L+G R+
Sbjct: 718 WEQLFGARV 726
>sp|ORF2_ZIKVF|UORF2 protein|Zika virus (isolate ZIKV/Human/French
Query: 3 KPLWGV 8
+PLWG+
Sbjct: 34 EPLWGL 39
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 WKPLWG 7
W+ LWG
Sbjct: 827 WRDLWG 832
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 5 LWGVR 9
+WGVR
Sbjct: 202 VWGVR 206
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RWKPLWGVRL 10
RW WG+ L
Sbjct: 12 RWGWKWGIML 21
15|Sequence|71|80|WGVRLRLRPC
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 GVRLRLRP 9
G R+R+RP
Sbjct: 305 GERVRVRP 312
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 2 GVRLRLRP 9
G R+R+RP
Sbjct: 305 GERVRVRP 312
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 4 RLRLRPC 10
RLR R C
Sbjct: 119 RLRFREC 125
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RLRLRP 9
R+RLRP
Sbjct: 18 RIRLRP 23
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 RLRLRP 9
R+RLRP
Sbjct: 18 RIRLRP 23
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 RLRLRP 9
R+RLRP
Sbjct: 18 RIRLRP 23
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RLRLRP 9
R+RLRP
Sbjct: 18 RIRLRP 23
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 RLRLRP 9
R+RLRP
Sbjct: 18 RIRLRP 23
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 4 RLRLRPC 10
RLR PC
Sbjct: 309 RLRSTPC 315
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 4 RLRLRPC 10
RLR PC
Sbjct: 312 RLRSTPC 318
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 RLRLRP 9
R+RLRP
Sbjct: 18 RIRLRP 23
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 5 LRLRPC 10
LRL PC
Sbjct: 784 LRLLPC 789
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 5 LRLRPC 10
LRL PC
Sbjct: 784 LRLLPC 789
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 1 WGVRLRLR 8
WG+ RLR
Sbjct: 174 WGMADRLR 181
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 1 WGVRLRLR 8
WG+ RLR
Sbjct: 192 WGMAHRLR 199
>sp|NP03_VZVO|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Oka
Query: 1 WGVRLRLRPC 10
WG L PC
Sbjct: 16 WGWGLHRGPC 25
>sp|NP03_VZVD|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 WGVRLRLRPC 10
WG L PC
Sbjct: 16 WGWGLHRGPC 25
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 5 LRLRPC 10
LRL PC
Sbjct: 784 LRLLPC 789
16|Sequence|76|85|RLRPCNLAHA
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 RLRPCN 6
RL PCN
Sbjct: 4060 RLEPCN 4065
Query: 2 LRPCNL 7
L PCNL
Sbjct: 6450 LEPCNL 6455
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 RLRPCN 6
RL PCN
Sbjct: 4085 RLEPCN 4090
Query: 2 LRPCNL 7
L PCNL
Sbjct: 6479 LEPCNL 6484
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 RPCNLAH 9
RPC+L H
Sbjct: 131 RPCDLKH 137
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 3 RPCNLAH 9
RPC+L H
Sbjct: 131 RPCDLKH 137
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 1 RLRPCNLA 8
+LR CN+A
Sbjct: 68 QLRKCNIA 75
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 LRPCNL 7
RPCN+
Sbjct: 1354 FRPCNV 1359
>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus
Query: 3 RPCNLAH 9
R CN++H
Sbjct: 102 RCCNISH 108
>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 RPCNLAH 9
R CN++H
Sbjct: 102 RCCNISH 108
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 CNLAH 9
CNL+H
Sbjct: 5015 CNLSH 5019
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 RPCNLAH 9
R CN++H
Sbjct: 102 RCCNISH 108
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 RPCNLA 8
R CNLA
Sbjct: 2708 RKCNLA 2713
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 RPCNLA 8
R CNLA
Sbjct: 2708 RKCNLA 2713
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 3 RPCNLAH 9
R CN++H
Sbjct: 102 RCCNISH 108
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 LRPCNLAHA 10
LRPC + A
Sbjct: 491 LRPCGIVPA 499
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 RLRPCNLAH 9
+LR C + H
Sbjct: 39 KLRNCRIPH 47
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 RLRPCNLAH 9
+LR C + H
Sbjct: 39 KLRNCRIPH 47
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 RLRPCNLAH 9
+LR C + H
Sbjct: 39 KLRNCRIPH 47
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 RLRPCNLAH 9
+LR C + H
Sbjct: 39 KLRNCRIPH 47
17|Sequence|81|90|NLAHAETLVI
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 3 AHAETLV 9
AHA+TLV
Sbjct: 2136 AHAKTLV 2142
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 1 NLAHAE 6
N+AHAE
Sbjct: 133 NIAHAE 138
18|Sequence|86|95|ETLVIEIRDK
>sp|CAP6_ADE41|PRE-PROTEIN VI|Human adenovirus F serotype 41
Query: 1 ETLVIEIRD 9
ETLV+E R+
Sbjct: 157 ETLVVESRE 165
>sp|CAP6_ADE40|PRE-PROTEIN VI|Human adenovirus F serotype 40
Query: 1 ETLVIEIRD 9
ETLV+E R+
Sbjct: 157 ETLVVESRE 165
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 ETLVIEIRDK 10
E LV+ +RD+
Sbjct: 15 EALVVILRDR 24
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 ETLVIEIRDK 10
+TLV ++RD+
Sbjct: 427 DTLVQQMRDR 436
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 ETLVIEIRDK 10
+TLV ++RD+
Sbjct: 427 DTLVQQMRDR 436
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 LVIEIRDK 10
+++EI+DK
Sbjct: 789 MLLEIKDK 796
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 LVIEIRDK 10
+++EI+DK
Sbjct: 789 MLLEIKDK 796
19|Sequence|91|100|EIRDKEDSSW
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 2 IRDKEDSSW 10
+RD+E +SW
Sbjct: 553 VRDQEKNSW 561
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 5 KEDSSW 10
+EDSSW
Sbjct: 282 REDSSW 287
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 5 KEDSSW 10
+EDSSW
Sbjct: 282 REDSSW 287
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 5 KEDSSW 10
+EDSSW
Sbjct: 282 REDSSW 287
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 2 IRDKEDSSW 10
IR+ E+++W
Sbjct: 94 IRESENATW 102
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 4 DKEDSSW 10
+K DSSW
Sbjct: 137 NKSDSSW 143
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 2 IRDKED 7
+RDKED
Sbjct: 244 LRDKED 249
>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)
Query: 1 EIRDKEDSSW 10
+IR+K D +W
Sbjct: 80 DIREKPDKNW 89
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 IRDKED 7
+RDKED
Sbjct: 244 LRDKED 249
>sp|MATRX_CHAV|MATRIX protein|Chandipura virus (strain I653514) (CHPV)
Query: 1 EIRDKEDSSW 10
EI+ ++D++W
Sbjct: 214 EIKKQKDNTW 223
>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)
Query: 3 RDKEDSSW 10
R+K++ SW
Sbjct: 387 REKQNKSW 394
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 EIRDKE 6
EI+DKE
Sbjct: 792 EIKDKE 797
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 EIRDKE 6
EI+DKE
Sbjct: 792 EIKDKE 797
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 RDKEDSSW 10
R+K++ SW
Sbjct: 387 REKQNKSW 394
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 RDKEDSSW 10
RD+ SW
Sbjct: 401 RDRHGGSW 408
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 RDKEDSSW 10
RD+ SW
Sbjct: 401 RDRHGGSW 408
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 RDKEDSSW 10
RD+ SW
Sbjct: 401 RDRHGGSW 408
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EIRDKEDSSW 10
EIRDK+ +
Sbjct: 165 EIRDKQKKEY 174
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 1 EIRDKEDSS 9
E D+EDSS
Sbjct: 52 ESEDEEDSS 60
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 1 EIRDKEDSS 9
E D+EDSS
Sbjct: 52 ESEDEEDSS 60
20|Sequence|96|105|EDSSWQLFTV
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 EDSSW 5
EDSSW
Sbjct: 283 EDSSW 287
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 EDSSW 5
EDSSW
Sbjct: 283 EDSSW 287
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 EDSSW 5
EDSSW
Sbjct: 283 EDSSW 287
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 2 DSSWQLF 8
DSSW ++
Sbjct: 538 DSSWHIY 544
>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 2 DSSWQLFT 9
+++W LFT
Sbjct: 179 NATWDLFT 186
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 2 DSSWQLFT 9
+++W LFT
Sbjct: 179 NATWDLFT 186
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 SSWQLF 8
S WQL+
Sbjct: 321 SGWQLY 326
>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P
Query: 1 EDSSWQ 6
EDS W+
Sbjct: 326 EDSEWR 331
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 EDSSW 5
+DSSW
Sbjct: 288 DDSSW 292
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 EDSSW 5
+DSSW
Sbjct: 288 DDSSW 292
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 EDSSW 5
+DSSW
Sbjct: 1252 DDSSW 1256
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 EDSSW 5
+DSSW
Sbjct: 1252 DDSSW 1256
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 EDSSW 5
+DSSW
Sbjct: 1252 DDSSW 1256
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 2 DSSWQLFTV 10
D+SW+ F +
Sbjct: 566 DASWKCFFI 574
21|Sequence|101|110|QLFTVQVQTE
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 3 FTVQVQTE 10
FT+ V+TE
Sbjct: 351 FTISVKTE 358
22|Sequence|106|115|QVQTEAIGEG
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 2 VQTEAIGE 9
+ TEA+GE
Sbjct: 8 ITTEAVGE 15
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 2 VQTEAIGE 9
+ TEA+GE
Sbjct: 8 ITTEAVGE 15
>sp|UL24_VZVO|PROTEIN UL24 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 VQTEAIGEG 10
+QTE+ G G
Sbjct: 81 IQTESSGAG 89
>sp|UL24_VZVD|PROTEIN UL24 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 VQTEAIGEG 10
+QTE+ G G
Sbjct: 81 IQTESSGAG 89
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 QVQTEAIG 8
Q+QT+A G
Sbjct: 122 QIQTDASG 129
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 QVQTEAIG 8
Q+QT+A G
Sbjct: 122 QIQTDASG 129
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 3 QTEAIGEG 10
QTE +GE
Sbjct: 152 QTERLGEA 159
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 3 QTEAIGEG 10
QTE +GE
Sbjct: 152 QTERLGEA 159
23|Sequence|111|120|AIGEGSLEPS
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 IGEGSLEP 9
IGEG EP
Sbjct: 946 IGEGPCEP 953
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 IGEGSLEP 9
IGEG EP
Sbjct: 949 IGEGPCEP 956
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 IGEGSLEP 9
IGEG EP
Sbjct: 953 IGEGPCEP 960
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 IGEGSLEP 9
IGEG EP
Sbjct: 953 IGEGPCEP 960
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 2 IGEGSLEP 9
+GEG+L P
Sbjct: 255 LGEGTLSP 262
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 IGEGSLEP 9
IGEG EP
Sbjct: 941 IGEGHCEP 948
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 IGEGSLEP 9
IG G+L+P
Sbjct: 41 IGRGALQP 48
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 IGEGSLEP 9
IG G+L+P
Sbjct: 41 IGRGALQP 48
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 IGEGSLEP 9
IGEG EP
Sbjct: 962 IGEGPCEP 969
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 GEGSLEPS 10
GEG LEP+
Sbjct: 1553 GEGLLEPA 1560
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 3 GEGSLEPS 10
G GSL+P+
Sbjct: 16 GAGSLDPA 23
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 IGEGSLEP 9
+ +GSLEP
Sbjct: 5746 LSKGSLEP 5753
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 IGEGSLEP 9
+ +GSLEP
Sbjct: 5766 LSKGSLEP 5773
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 IGEGSLEP 9
+ +GSLEP
Sbjct: 5796 LSKGSLEP 5803
>sp|PG067_VACCD|PROTEIN OPG067|Vaccinia virus (strain Dairen I)
Query: 1 AIGEGSLEPS 10
AIG+ S PS
Sbjct: 124 AIGKASQNPS 133
>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 AIGEGSLEPS 10
AIG+ S PS
Sbjct: 124 AIGKASQNPS 133
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 GEGSLEP 9
GEG L+P
Sbjct: 1560 GEGRLDP 1566
>sp|VL2_HPV04|MINOR capsid protein L2|Human papillomavirus 4
Query: 2 IGEGSLEPS 10
IGE +L+P+
Sbjct: 133 IGETTLQPA 141
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 GEGSLEP 9
GEG L+P
Sbjct: 1566 GEGRLDP 1572
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 GEGSLEP 9
GEG L+P
Sbjct: 1566 GEGRLDP 1572
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 GEGSLEP 9
GEG L+P
Sbjct: 1562 GEGRLDP 1568
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 GEGSLEP 9
GEG L+P
Sbjct: 1563 GEGRLDP 1569
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 GEGSLEP 9
GEG L+P
Sbjct: 1563 GEGRLDP 1569
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 GEGSLEP 9
GEG L+P
Sbjct: 1559 GEGRLDP 1565
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 GEGSLEPS 10
GEG L P+
Sbjct: 1558 GEGRLNPT 1565
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 GEGSLEP 9
GEG L+P
Sbjct: 1564 GEGRLDP 1570
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 GEGSLEPS 10
GEG L P+
Sbjct: 1558 GEGRLNPT 1565
24|Sequence|116|125|SLEPSPQSQA
>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LEPSPQSQ 9
L+PSPQ Q
Sbjct: 219 LQPSPQYQ 226
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LEPSPQSQ 9
L+PSPQ Q
Sbjct: 216 LQPSPQHQ 223
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 1 SLEPSPQ 7
S EPSPQ
Sbjct: 442 SREPSPQ 448
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 LEPSPQSQA 10
L P+PQS A
Sbjct: 1238 LSPTPQSAA 1246
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 LEPSPQSQA 10
L P+PQS A
Sbjct: 1235 LSPTPQSAA 1243
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 SLEPSPQ 7
S+EPSP+
Sbjct: 1772 SIEPSPE 1778
>sp|YHR1_HCMVA|UNCHARACTERIZED protein HHRF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PSPQSQA 10
PSP+SQA
Sbjct: 40 PSPRSQA 46
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 SLEPSPQ 7
S+EPSP+
Sbjct: 1772 SIEPSPE 1778
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 EPSPQSQA 10
EP P+S+A
Sbjct: 1506 EPKPKSRA 1513
25|Sequence|121|130|PQSQAEDGRS
***** No hits found ******
26|Sequence|126|135|EDGRSQAAVG
>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EDGRSQAAVG 10
EDG + AAV
Sbjct: 195 EDGETVAAVS 204
>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EDGRSQAAVG 10
EDG + AAV
Sbjct: 195 EDGETVAAVS 204
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DGRSQAAV 9
D RSQAA
Sbjct: 276 DSRSQAAT 283
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DGRSQAAV 9
D RSQAA
Sbjct: 276 DSRSQAAT 283
27|Sequence|131|140|QAAVGAVPEG
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 2 AAVGAVPEG 10
+ +GA+P+G
Sbjct: 441 SVIGALPQG 449
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 2 AAVGAVPEG 10
+ +GA+P+G
Sbjct: 441 SVIGALPQG 449
>sp|GJ_HHV2H|ENVELOPE glycoprotein J|Human herpesvirus 2 (strain HG52)
Query: 2 AAVGAVPEG 10
AAVGA P G
Sbjct: 18 AAVGAAPTG 26
>sp|L2MU_ADE12|LATE L2 mu core protein|Human adenovirus A serotype 12
Query: 2 AAVGAVP 8
AA+GAVP
Sbjct: 53 AAIGAVP 59
>sp|COR10_ADE05|PRE-CORE protein X|Human adenovirus C serotype 5
Query: 2 AAVGAVP 8
AA+GAVP
Sbjct: 62 AAIGAVP 68
>sp|COR10_ADE02|PRE-CORE protein X|Human adenovirus C serotype 2
Query: 2 AAVGAVP 8
AA+GAVP
Sbjct: 62 AAIGAVP 68
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 VGAVPEG 10
VGAVP G
Sbjct: 959 VGAVPPG 965
28|Sequence|136|145|AVPEGAWKDT
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 VPEGAWKD 9
+PEG W+D
Sbjct: 1834 IPEGEWRD 1841
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 VPEGAWKD 9
+PEG W+D
Sbjct: 1835 IPEGEWRD 1842
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 VPEGAWKD 9
+P+G W+D
Sbjct: 1834 IPDGEWRD 1841
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 VPEGAWKD 9
+P+G W+D
Sbjct: 1834 IPDGEWRD 1841
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 VPEGAWKD 9
+P+G W+D
Sbjct: 1834 IPDGEWRD 1841
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 VPEGAWKD 9
+P+G W+D
Sbjct: 1834 IPDGEWRD 1841
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 VPEGAWKD 9
+P+G W+D
Sbjct: 1834 IPDGEWRD 1841
>sp|VP7_ROTHM|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 VPEGAWKDT 10
+ +G WKD+
Sbjct: 93 ISDGEWKDS 101
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 AVPEGAWKD 9
A+P+G W++
Sbjct: 1835 AIPDGEWRE 1843
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 AVPEGAWKD 9
A+P+G W++
Sbjct: 1835 AIPDGEWRE 1843
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 VPEGAWKD 9
+P G W+D
Sbjct: 1834 IPNGEWRD 1841
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 VPEGAWKDT 10
+P+G W+++
Sbjct: 857 LPDGVWEES 865
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 AVPEGAW 7
A+P GAW
Sbjct: 388 ALPVGAW 394
>sp|VP7_ROTHX|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 VPEGAWKDT 10
+ +G WKD+
Sbjct: 93 INDGEWKDS 101
>sp|VP7_ROTH4|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 VPEGAWKDT 10
+ +G WKD+
Sbjct: 93 INDGEWKDS 101
>sp|VP7_ROTHB|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 VPEGAWKDT 10
+ + +WKDT
Sbjct: 93 IADSSWKDT 101
>sp|VP7_ROTH6|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 VPEGAWKDT 10
+ + +WKDT
Sbjct: 93 IADSSWKDT 101
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 AVPEGAW 7
++P GAW
Sbjct: 387 SIPVGAW 393
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 AVPEGAW 7
++P GAW
Sbjct: 387 SIPVGAW 393
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 AVPEGAW 7
++P GAW
Sbjct: 387 SIPVGAW 393
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 AVPEGAW 7
++P GAW
Sbjct: 387 SIPVGAW 393
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 AVPEGAW 7
++P GAW
Sbjct: 387 SIPVGAW 393
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 AVPEGAW 7
++P GAW
Sbjct: 387 SIPVGAW 393
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 2 VPEGAWKD 9
VP+ WK+
Sbjct: 386 VPQNKWKE 393
>sp|VP7_ROTHJ|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 VPEGAWKDT 10
+ +G WKD+
Sbjct: 93 INDGDWKDS 101
>sp|VP7_ROTH3|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 VPEGAWKDT 10
+ + +WKDT
Sbjct: 93 INDNSWKDT 101
>sp|VP7_ROTHW|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 VPEGAWKDT 10
+ +G WKD+
Sbjct: 93 INDGDWKDS 101
>sp|VP7_ROTHP|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 VPEGAWKDT 10
+ + +WKDT
Sbjct: 93 INDNSWKDT 101
>sp|VP7_ROTHK|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 VPEGAWKDT 10
+ +G WKD+
Sbjct: 93 INDGDWKDS 101
>sp|VP7_ROTAD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 VPEGAWKDT 10
+ +G WKD+
Sbjct: 93 INDGDWKDS 101
>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)
Query: 3 PEGAWK 8
P G WK
Sbjct: 379 PSGTWK 384
>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain AD169)
Query: 3 PEGAWK 8
P G WK
Sbjct: 379 PSGTWK 384
>sp|VP7_ROTAM|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 VPEGAWKDT 10
+ + +WKDT
Sbjct: 93 INDNSWKDT 101
>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 VPEGAWKDT 10
+ + +WKDT
Sbjct: 93 INDNSWKDT 101
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 EGAWK 8
EGAWK
Sbjct: 228 EGAWK 232
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 EGAWK 8
EGAWK
Sbjct: 128 EGAWK 132
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 EGAWK 8
EGAWK
Sbjct: 228 EGAWK 232
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 2 VPEGAWKD 9
+P+ +W D
Sbjct: 133 IPKSSWSD 140
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 VPEGAWKD 9
+P+ +W D
Sbjct: 133 IPKSSWSD 140
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 AVPEGAWK 8
VP G W+
Sbjct: 1027 GVPRGFWR 1034
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 AVPEGAWK 8
VP G W+
Sbjct: 1027 GVPRGFWR 1034
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 AVPEGAW 7
++P GAW
Sbjct: 387 SLPVGAW 393
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 AVPEGAW 7
++P GAW
Sbjct: 387 SLPVGAW 393
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 AVPEGAW 7
A+P G+W
Sbjct: 387 ALPVGSW 393
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 3 PEGAWKD 9
P G W++
Sbjct: 71 PNGGWRN 77
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 3 PEGAWKD 9
P G W++
Sbjct: 71 PNGGWRN 77
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 3 PEGAWKD 9
P G W++
Sbjct: 71 PNGGWRN 77
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 3 PEGAWKD 9
P G W++
Sbjct: 71 PNGGWRN 77
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 3 PEGAWKD 9
P G W++
Sbjct: 71 PNGGWRN 77
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 AVPEGAW 7
A P GAW
Sbjct: 69 APPGGAW 75
>sp|E1A_ADE12|EARLY E1A protein|Human adenovirus A serotype 12
Query: 1 AVPEGAWK 8
AVPEG K
Sbjct: 217 AVPEGVIK 224
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 VPEGAWKD 9
VP W+D
Sbjct: 530 VPSTVWED 537
>sp|VB10_VACCT|KELCH repeat protein B10|Vaccinia virus (strain Tian Tan)
Query: 4 EGAWK 8
+GAWK
Sbjct: 145 DGAWK 149
>sp|VB10_VACCC|KELCH repeat protein B10|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 EGAWK 8
+GAWK
Sbjct: 145 DGAWK 149
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 3 PEGAWKD 9
P+G W D
Sbjct: 343 PDGLWGD 349
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 EGAWKD 9
EGAWK
Sbjct: 228 EGAWKQ 233
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 EGAWKD 9
EGAWK
Sbjct: 228 EGAWKQ 233
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 EGAWKD 9
EGAWK
Sbjct: 228 EGAWKQ 233
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 EGAWK 8
EGAWK
Sbjct: 227 EGAWK 231
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 EGAWK 8
EGAWK
Sbjct: 227 EGAWK 231
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 EGAWK 8
EGAWK
Sbjct: 227 EGAWK 231
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 EGAWK 8
EGAWK
Sbjct: 227 EGAWK 231
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 EGAWK 8
EGAWK
Sbjct: 228 EGAWK 232
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 EGAWK 8
EGAWK
Sbjct: 227 EGAWK 231
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 EGAWK 8
EGAWK
Sbjct: 228 EGAWK 232
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 EGAWK 8
EGAWK
Sbjct: 228 EGAWK 232
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 EGAWK 8
EGAWK
Sbjct: 228 EGAWK 232
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 EGAWK 8
EGAWK
Sbjct: 228 EGAWK 232
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 EGAWK 8
EGAWK
Sbjct: 228 EGAWK 232
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 EGAWK 8
EGAWK
Sbjct: 228 EGAWK 232
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 VPEGAW 7
+P GAW
Sbjct: 388 MPVGAW 393
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 VPEGAW 7
+P GAW
Sbjct: 388 MPVGAW 393
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 VPEGAW 7
+P GAW
Sbjct: 389 LPVGAW 394
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 1 AVPEGAWK 8
AVP+ WK
Sbjct: 104 AVPKRCWK 111
>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate
Query: 3 PEGAWKD 9
P G W D
Sbjct: 194 PRGTWWD 200
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 VPEGAW 7
+P GAW
Sbjct: 388 LPVGAW 393
>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10
Query: 3 PEGAWK 8
P+G WK
Sbjct: 106 PKGCWK 111
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 EGAWKD 9
EG W+D
Sbjct: 2543 EGVWQD 2548
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 1 AVPEGA 6
AVP+GA
Sbjct: 271 AVPDGA 276
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 EGAWKDT 10
E W DT
Sbjct: 657 ESGWSDT 663
29|Sequence|141|150|AWKDTAQLHK
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 2 WKDTA 6
WKDTA
Sbjct: 332 WKDTA 336
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 AWKDTAQLHK 10
+W D Q+H+
Sbjct: 2127 SWVDGVQIHR 2136
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 AWKDTAQLHK 10
+W D Q+H+
Sbjct: 2127 SWVDGVQIHR 2136
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 AWKDTAQLHK 10
AW D HK
Sbjct: 228 AWMDVGHSHK 237
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 AWKDTAQLHK 10
+W D Q+H+
Sbjct: 2127 SWVDGVQIHR 2136
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 AWKDTAQLHK 10
+W D Q+H+
Sbjct: 2127 SWVDGVQIHR 2136
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 AWKDTAQLHK 10
+W D Q+H+
Sbjct: 2127 SWVDGVQIHR 2136
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 AWKDTAQLHK 10
+W D Q+H+
Sbjct: 2127 SWVDGVQIHR 2136
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 AWKDTAQLHK 10
AW D + HK
Sbjct: 230 AWIDVGRSHK 239
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 4 DTAQLH 9
DT QLH
Sbjct: 855 DTTQLH 860
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 DTAQLHK 10
DT QLH+
Sbjct: 258 DTIQLHQ 264
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 4 DTAQLHK 10
DT QLH+
Sbjct: 258 DTIQLHQ 264
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 4 DTAQLHK 10
DT QLH+
Sbjct: 258 DTIQLHQ 264
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 DTAQLHK 10
DT QLH+
Sbjct: 258 DTIQLHQ 264
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 WKDTAQLHK 10
WK +Q H+
Sbjct: 13 WKKMSQAHQ 21
30|Sequence|146|155|AQLHKSEEAV
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 AQLHKSEE 8
A LH SEE
Sbjct: 565 ADLHFSEE 572
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AQLHKSEE 8
+++H+SEE
Sbjct: 613 SEVHRSEE 620
31|Sequence|151|160|SEEAVSVGQK
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 EEAVSVGQK 10
EEA+ GQ+
Sbjct: 992 EEAIPKGQR 1000
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 SEEAVSV 7
SEEAVS+
Sbjct: 1990 SEEAVSL 1996
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 SEEAVSV 7
SEEAVS+
Sbjct: 1990 SEEAVSL 1996
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 SEEAVSV 7
SEEAVS+
Sbjct: 1990 SEEAVSL 1996
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 SEEAVSV 7
SEEAVS+
Sbjct: 1990 SEEAVSL 1996
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 SEEAVSV 7
SEEAVS+
Sbjct: 1990 SEEAVSL 1996
32|Sequence|156|165|SVGQKRVLRY
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 GQKRVLR 9
G+KR+LR
Sbjct: 2083 GEKRILR 2089
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 GQKRVLR 9
GQ+RVL+
Sbjct: 2076 GQRRVLK 2082
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 1 SVGQKRVLRY 10
S QK+ LRY
Sbjct: 198 SYEQKKALRY 207
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 GQKRVLR 9
G+KRVL+
Sbjct: 2083 GEKRVLK 2089
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 GQKRVLR 9
G+KRVL+
Sbjct: 2087 GEKRVLK 2093
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 GQKRVLR 9
G+KRVL+
Sbjct: 2087 GEKRVLK 2093
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SVGQKRVLRY 10
+ G K++ RY
Sbjct: 340 TYGHKKITRY 349
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SVGQKRVLRY 10
+ G K++ RY
Sbjct: 340 TYGHKKITRY 349
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 1 SVGQKRVL 8
++GQ+RV+
Sbjct: 409 AIGQQRVI 416
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 1 SVGQKRVL 8
++GQ+RV+
Sbjct: 409 AIGQQRVI 416
33|Sequence|161|170|RVLRYYLFQG
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 4 RYYLFQG 10
RY+LF+G
Sbjct: 430 RYWLFKG 436
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 4 RYYLFQG 10
RY+LF+G
Sbjct: 430 RYWLFKG 436
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 4 RYYLFQG 10
RY+LF+G
Sbjct: 430 RYWLFKG 436
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 4 RYYLFQG 10
RY+LF+G
Sbjct: 421 RYWLFKG 427
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 4 RYYLFQG 10
RY+LF+G
Sbjct: 422 RYWLFKG 428
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 4 RYYLFQG 10
RY+LF+G
Sbjct: 422 RYWLFKG 428
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 RVLRYYL 7
RVL YYL
Sbjct: 516 RVLEYYL 522
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 RVLRYYL 7
RVL YYL
Sbjct: 581 RVLEYYL 587
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 RVLRYYL 7
RVL YYL
Sbjct: 581 RVLEYYL 587
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 RVLRYYL 7
RVL YYL
Sbjct: 581 RVLEYYL 587
>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)
Query: 3 LRYYLFQ 9
L YYLFQ
Sbjct: 150 LYYYLFQ 156
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 VLRYYLFQG 10
+ YYLF+G
Sbjct: 160 TMAYYLFEG 168
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VLRYYLFQG 10
+ YYLF+G
Sbjct: 160 TMAYYLFEG 168
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VLRYYLFQG 10
+ YYLF+G
Sbjct: 160 TMAYYLFEG 168
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 4 RYYLFQG 10
RYYL Q
Sbjct: 250 RYYLLQA 256
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 4 RYYLFQG 10
RYYL Q
Sbjct: 247 RYYLLQA 253
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 4 RYYLFQ 9
RYYL Q
Sbjct: 242 RYYLLQ 247
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 RYYLFQ 9
RYYL Q
Sbjct: 242 RYYLLQ 247
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 4 RYYLFQG 10
RY++F+G
Sbjct: 437 RYWVFKG 443
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RVLRYYL 7
RVL YYL
Sbjct: 700 RVLPYYL 706
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 RVLRYYL 7
RVL YYL
Sbjct: 700 RVLPYYL 706
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 RVLRYYL 7
RVL YYL
Sbjct: 700 RVLPYYL 706
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 1 RVLRYYL 7
RVL YYL
Sbjct: 700 RVLPYYL 706
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RVLRYYL 7
RVL YYL
Sbjct: 700 RVLPYYL 706
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RVLRYYLF 8
RVL +Y+F
Sbjct: 234 RVLPHYMF 241
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 3 LRYYLFQG 10
LR Y+++G
Sbjct: 52 LRQYVYEG 59
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 YYLFQG 10
YY+F G
Sbjct: 340 YYVFDG 345
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 YYLFQG 10
YY+F G
Sbjct: 340 YYVFDG 345
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 YYLFQG 10
YY+F G
Sbjct: 340 YYVFDG 345
34|Sequence|166|175|YLFQGQRYIW
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 LFQGQR 7
LFQGQR
Sbjct: 144 LFQGQR 149
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 LFQGQR 7
LFQGQR
Sbjct: 144 LFQGQR 149
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 2 LFQGQR 7
LFQGQR
Sbjct: 144 LFQGQR 149
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 1 YLFQGQRYIW 10
+ +QG++Y W
Sbjct: 272 FTWQGKQYCW 281
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 LFQGQRYIW 10
L QG R +W
Sbjct: 168 LIQGDRVLW 176
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 YLFQGQRYIW 10
+ +QG++Y W
Sbjct: 272 FTWQGKQYCW 281
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YLFQGQ 6
YLF+GQ
Sbjct: 164 YLFEGQ 169
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 YLFQGQ 6
YLF+GQ
Sbjct: 164 YLFEGQ 169
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YLFQGQ 6
YLF+GQ
Sbjct: 164 YLFEGQ 169
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 LFQGQRY 8
LF GQ+Y
Sbjct: 1792 LFPGQKY 1798
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 LFQGQRY 8
LF GQ+Y
Sbjct: 1792 LFPGQKY 1798
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 FQGQRYI 9
F G+RYI
Sbjct: 511 FAGRRYI 517
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 FQGQRYI 9
F G+RYI
Sbjct: 511 FAGRRYI 517
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 FQGQRYIW 10
F+G Y+W
Sbjct: 3697 FRGLTYVW 3704
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 FQGQRYIW 10
F+G Y+W
Sbjct: 3697 FRGLTYVW 3704
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 YLFQGQRYIW 10
+ + GQ+Y W
Sbjct: 272 FTWLGQQYCW 281
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 2 LFQGQRYIW 10
+ GQ+++W
Sbjct: 714 VIDGQQFLW 722
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 LFQGQRYIW 10
+ GQ+++W
Sbjct: 714 VIDGQQFLW 722
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 4 QGQRYIW 10
QGQ Y++
Sbjct: 113 QGQNYVY 119
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 FQGQRYIW 10
F+G Y+W
Sbjct: 3727 FRGFTYVW 3734
>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LFQGQRYI 9
LFQ RYI
Sbjct: 224 LFQDVRYI 231
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 FQGQRYIW 10
F+G Y+W
Sbjct: 3727 FRGFTYVW 3734
>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LFQGQRYI 9
LFQ RYI
Sbjct: 224 LFQDVRYI 231
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 FQGQRYIW 10
F+G Y+W
Sbjct: 3677 FRGFTYVW 3684
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 FQGQRYIW 10
F+G Y+W
Sbjct: 3677 FRGFTYVW 3684
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YLFQGQRYI 9
Y F QRY+
Sbjct: 1032 YRFMRQRYL 1040
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YLFQGQRYI 9
Y F QRY+
Sbjct: 1032 YRFMRQRYL 1040
>sp|VP2_SVSAP|MINOR capsid protein VP2|Sapporo virus (isolate
Query: 5 GQRYIW 10
G+R IW
Sbjct: 91 GERVIW 96
>sp|VP2_SVM93|MINOR capsid protein VP2|Sapporo virus (strain Human/United
Query: 5 GQRYIW 10
G+R IW
Sbjct: 91 GERVIW 96
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 5 GQRYIW 10
G+RY W
Sbjct: 592 GKRYRW 597
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 5 GQRYIW 10
G+RY W
Sbjct: 592 GKRYRW 597
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 5 GQRYIW 10
G+RY W
Sbjct: 592 GKRYRW 597
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 1 YLFQGQRYIW 10
YLF + +W
Sbjct: 229 YLFLSREILW 238
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 1 YLFQGQRYIW 10
YLF + +W
Sbjct: 229 YLFLSREILW 238
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 4 QGQRYIW 10
QG Y W
Sbjct: 727 QGDSYAW 733
>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)
Query: 1 YLFQGQRYIW 10
+L GQ Y W
Sbjct: 202 HLPSGQIYCW 211
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 4 QGQRYIW 10
+G Y+W
Sbjct: 643 EGVEYVW 649
35|Sequence|171|180|QRYIWIETQQ
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 4 IWIETQ 9
IWI+TQ
Sbjct: 1781 IWIKTQ 1786
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 4 IWIETQ 9
IWI+TQ
Sbjct: 1781 IWIKTQ 1786
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 4 IWIETQQ 10
IW +TQQ
Sbjct: 1877 IWFKTQQ 1883
>sp|E434_ADE02|EARLY 4 ORF6 protein|Human adenovirus C serotype 2
Query: 1 QRYIW 5
QR+IW
Sbjct: 156 QRFIW 160
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 IWIETQ 9
+W+ET+
Sbjct: 2044 LWLETE 2049
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 4 IWIETQ 9
+W+ET+
Sbjct: 2017 LWLETE 2022
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 4 IWIETQ 9
+W+ET+
Sbjct: 2022 LWLETE 2027
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 WIETQQ 10
WIE+Q+
Sbjct: 974 WIESQK 979
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 WIETQQ 10
WIE+Q+
Sbjct: 974 WIESQK 979
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 WIETQQ 10
WIE+Q+
Sbjct: 974 WIESQK 979
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 QRYIW 5
Q YIW
Sbjct: 878 QNYIW 882
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 WIETQQ 10
WIE+Q+
Sbjct: 974 WIESQK 979
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 WIETQQ 10
WIE+Q+
Sbjct: 974 WIESQK 979
36|Sequence|176|185|IETQQAFYQV
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 TQQAFYQ 9
TQQA YQ
Sbjct: 562 TQQALYQ 568
>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)
Query: 3 TQQAFY 8
T+QAFY
Sbjct: 52 TEQAFY 57
>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 TQQAFY 8
T+QAFY
Sbjct: 52 TEQAFY 57
>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 TQQAFY 8
T+QAFY
Sbjct: 52 TEQAFY 57
>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 TQQAFY 8
T+QAFY
Sbjct: 52 TEQAFY 57
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 IETQQAFYQV 10
+ET+Q +QV
Sbjct: 138 VETEQMAHQV 147
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 IETQQAFYQV 10
I T Q F+QV
Sbjct: 1491 IHTPQTFFQV 1500
37|Sequence|181|190|AFYQVSLLDH
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 3 YQVSLLDH 10
YQVS ++H
Sbjct: 1916 YQVSTIEH 1923
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 3 YQVSLLDH 10
Y +SLL H
Sbjct: 811 YSISLLKH 818
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 1 AFYQVSLL 8
FY +SLL
Sbjct: 328 GFYMISLL 335
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 AFYQVSLL 8
FY +SLL
Sbjct: 328 GFYMISLL 335
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 AFYQVSLL 8
FY +SLL
Sbjct: 328 GFYMISLL 335
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 AFYQVSLL 8
FY +SLL
Sbjct: 328 GFYMISLL 335
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 AFYQVSLL 8
FY +SLL
Sbjct: 320 GFYMISLL 327
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 1 AFYQVSLL 8
FY +SLL
Sbjct: 328 GFYMISLL 335
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 AFYQVSLL 8
FY +SLL
Sbjct: 328 GFYMISLL 335
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 AFYQVSLL 8
FY +SLL
Sbjct: 328 GFYMISLL 335
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 AFYQVSLL 8
FY +SLL
Sbjct: 328 GFYMISLL 335
>sp|CEP1_EBVG|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 FYQVSLL 8
FYQ SLL
Sbjct: 244 FYQDSLL 250
>sp|CEP1_EBVB9|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 FYQVSLL 8
FYQ SLL
Sbjct: 244 FYQDSLL 250
>sp|CEP1_EBVA8|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 FYQVSLL 8
FYQ SLL
Sbjct: 244 FYQDSLL 250
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 4 QVSLLD 9
QVSLLD
Sbjct: 2075 QVSLLD 2080
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 4 QVSLLD 9
QVSLLD
Sbjct: 2075 QVSLLD 2080
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 4 QVSLLD 9
QVSLLD
Sbjct: 2075 QVSLLD 2080
38|Sequence|186|195|SLLDHGRSCD
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LLDHGRSCD 10
LLDH CD
Sbjct: 297 LLDHHNVCD 305
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 LDHGRSCD 10
L+HG +CD
Sbjct: 4056 LNHGCTCD 4063
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 LDHGRSCD 10
L+HG +CD
Sbjct: 4056 LNHGCTCD 4063
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 LLDHGRSCD 10
LLDH CD
Sbjct: 297 LLDHHNVCD 305
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LLDHGRSCD 10
LLDH CD
Sbjct: 297 LLDHHNVCD 305
>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 DHGRSCD 10
D GR CD
Sbjct: 241 DRGRVCD 247
>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 DHGRSCD 10
D GR CD
Sbjct: 241 DRGRVCD 247
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 LDHGRSCD 10
L HG +CD
Sbjct: 4031 LGHGCACD 4038
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LLDHGRSCD 10
LL H CD
Sbjct: 220 LLSHADGCD 228
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 LDHGRSCD 10
L HG +CD
Sbjct: 4031 LGHGCACD 4038
>sp|PHOSP_PI3H4|PHOSPHOPROTEIN parainfluenza 3 virus (strain
Query: 4 DHGRSCD 10
DHGRS +
Sbjct: 187 DHGRSLE 193
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 HGRSC 9
HGR C
Sbjct: 854 HGRPC 858
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 HGRSC 9
HGR C
Sbjct: 863 HGRPC 867
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 HGRSC 9
HGR C
Sbjct: 844 HGRPC 848
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 5 HGRSCD 10
HGR C+
Sbjct: 495 HGRLCE 500
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 5 HGRSCD 10
HGR C+
Sbjct: 495 HGRLCE 500
>sp|CCU83_HHV6U|PUTATIVE CC-type chemokine U83|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LDHGRSCD 10
LD G CD
Sbjct: 70 LDEGSMCD 77
>sp|UL128_HCMVM|ENVELOPE protein UL128|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LLDHGR 7
LLDH R
Sbjct: 16 LLDHSR 21
39|Sequence|191|200|GRSCDDVHRS
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 1 GRSCDDVHR 9
G CD++HR
Sbjct: 188 GDVCDEIHR 196
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GRSCDDVHR 9
G CD++HR
Sbjct: 188 GDVCDEIHR 196
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 1 GRSCDDVHR 9
G CD++HR
Sbjct: 188 GDVCDEIHR 196
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 GRSCDD 6
GRSCDD
Sbjct: 2194 GRSCDD 2199
Query: 3 SCDDV 7
SCDDV
Sbjct: 230 SCDDV 234
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 GRSCDDVHR 9
GR CD+ HR
Sbjct: 65 GRICDNPHR 73
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 1 GRSCDDVHR 9
GR CD+ HR
Sbjct: 65 GRICDNPHR 73
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 GRSCDDVHR 9
GR CD HR
Sbjct: 65 GRICDSPHR 73
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 GRSCDDVHR 9
GR CD HR
Sbjct: 65 GRICDSPHR 73
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 1 GRSCDDVHR 9
GR CD HR
Sbjct: 49 GRICDSPHR 57
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 1 GRSCDDVHR 9
GR CD HR
Sbjct: 65 GRICDSPHR 73
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 GRSCDDVHR 9
GR CD HR
Sbjct: 65 GRICDSPHR 73
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 1 GRSCDDVHR 9
GR CD HR
Sbjct: 49 GRICDSPHR 57
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 1 GRSCDDVHR 9
R+C D HR
Sbjct: 517 ARACGDAHR 525
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 1 GRSCDDVHR 9
R+C D HR
Sbjct: 517 ARACGDAHR 525
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CDDVH 8
CDD+H
Sbjct: 663 CDDIH 667
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 1 GRSCDDVHR 9
G+ CD+ HR
Sbjct: 65 GKICDNPHR 73
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 1 GRSCDDVHR 9
G+ CD+ HR
Sbjct: 65 GKICDNPHR 73
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CDDVH 8
CDD+H
Sbjct: 663 CDDIH 667
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 1 GRSCDDVHR 9
G+ CD+ HR
Sbjct: 65 GKICDNPHR 73
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 1 GRSCDDV 7
GRSCD +
Sbjct: 54 GRSCDSM 60
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 1 GRSCDDVHR 9
G+SC HR
Sbjct: 460 GKSCPKPHR 468
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 GRSCDDVHR 9
GR+C+++ R
Sbjct: 2201 GRTCEELTR 2209
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 1 GRSCDD 6
GRSC D
Sbjct: 54 GRSCSD 59
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 GRSCDDV 7
GR+ DDV
Sbjct: 139 GRNADDV 145
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 RSCDDVHRS 10
+ C D HR+
Sbjct: 935 KECPDEHRA 943
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 RSCDDVHRS 10
+ C D HR+
Sbjct: 935 KECPDEHRA 943
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 RSCDDVHRS 10
+ C D HR+
Sbjct: 935 KECPDEHRA 943
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GRSCD 5
GR+CD
Sbjct: 529 GRACD 533
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GRSCD 5
GR+CD
Sbjct: 529 GRACD 533
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GRSCD 5
GR+CD
Sbjct: 529 GRACD 533
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 RSCDDVHRS 10
+ C D HR+
Sbjct: 863 KECPDEHRA 871
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 CDDVH 8
CDD H
Sbjct: 1321 CDDCH 1325
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 4 CDDVHRS 10
CD +H S
Sbjct: 179 CDTIHNS 185
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 RSCDDVH 8
R CDD++
Sbjct: 1767 RLCDDIN 1773
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 1 GRSCDDVHR 9
G+ C++ HR
Sbjct: 65 GKICNNPHR 73
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 1 GRSCDDVHR 9
G+ C++ HR
Sbjct: 65 GKICNNPHR 73
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 1 GRSCDDVHR 9
G+ C++ HR
Sbjct: 65 GKICNNPHR 73
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 1 GRSCDDVHR 9
G+ C++ HR
Sbjct: 65 GKICNNPHR 73
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 1 GRSCDDVHR 9
G+ C++ HR
Sbjct: 65 GKICNNPHR 73
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 1 GRSCDDVHR 9
G+ C++ HR
Sbjct: 65 GKICNNPHR 73
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 1 GRSCDDVHR 9
G+ C++ HR
Sbjct: 66 GKICNNPHR 74
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 GRSCDDVHR 9
G+ C++ HR
Sbjct: 65 GKICNNPHR 73
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 1 GRSCDDVHR 9
G+ C++ HR
Sbjct: 65 GKICNNPHR 73
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 1 GRSCDDVHR 9
G+ C++ HR
Sbjct: 65 GKICNNPHR 73
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 1 GRSCDDVHR 9
G+ C++ HR
Sbjct: 49 GKICNNPHR 57
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 1 GRSCDDVHR 9
G+ C++ HR
Sbjct: 49 GKICNNPHR 57
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 2 RSCDDVH 8
R+C D H
Sbjct: 137 RTCPDYH 143
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CDDVHRS 10
CD VH S
Sbjct: 165 CDPVHES 171
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 RSCDDVH 8
R+C D H
Sbjct: 137 RTCPDYH 143
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CDDVHRS 10
CD VH S
Sbjct: 164 CDPVHES 170
>sp|L_LYCVW|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain WE)
Query: 3 SCDDV 7
SCDDV
Sbjct: 230 SCDDV 234
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 GRSCDDVHR 9
G+ C++ HR
Sbjct: 65 GKICNNPHR 73
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 GRSCDDVH 8
GR CD H
Sbjct: 594 GRKCDFGH 601
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 RSCDDVHRS 10
+ C D HR+
Sbjct: 935 KECPDEHRA 943
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 1 GRSCD 5
G+SCD
Sbjct: 205 GKSCD 209
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CDDVHRS 10
CD VH S
Sbjct: 165 CDPVHES 171
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RSCDDVH 8
R CDDV
Sbjct: 136 RRCDDVE 142
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RSCDDVH 8
R CDDV
Sbjct: 136 RRCDDVE 142
40|Sequence|196|205|DVHRSRHGLS
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 3 HRSRHGL 9
H SRHG
Sbjct: 350 HSSRHGF 356
>sp|CFLA_MCV1|VIRAL CASP8 and FADD-like apoptosis|Molluscum contagiosum virus subtype
Query: 1 DVHRSRHGLS 10
D+ +SR GLS
Sbjct: 71 DLLKSRFGLS 80
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DVHRSR 6
+VHRSR
Sbjct: 156 EVHRSR 161
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DVHRSR 6
+VHRSR
Sbjct: 156 EVHRSR 161
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 DVHRSR 6
+VHRSR
Sbjct: 156 EVHRSR 161
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DVHRSRHG 8
+V R+RHG
Sbjct: 336 NVTRARHG 343
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 DVHRSRHG 8
+V R+RHG
Sbjct: 336 NVTRARHG 343
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DVHRSRHG 8
+V R+RHG
Sbjct: 336 NVTRARHG 343
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 VHRSRHGLS 10
+ RSR G+S
Sbjct: 218 MERSRRGMS 226
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 VHRSRHGLS 10
+ RSR G+S
Sbjct: 218 MERSRRGMS 226
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 VHRSRHGLS 10
+ RSR G+S
Sbjct: 218 MERSRRGMS 226
>sp|F9_ORFN2|PROTEIN F9 homolog|Orf virus (strain NZ2) (OV
Query: 2 VHRSRHGLS 10
V SRHGL+
Sbjct: 20 VPASRHGLA 28
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 VHRSRHGLS 10
+ RSR G+S
Sbjct: 218 MERSRRGMS 226
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 VHRSRHG 8
+HR HG
Sbjct: 1061 IHRGYHG 1067
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 VHRSRHG 8
+HR R G
Sbjct: 117 IHRDREG 123
41|Sequence|201|210|RHGLSLQDQM
>sp|E411_ADE12|PROBABLE early E4 11 kDa|Human adenovirus A serotype 12
Query: 2 HGLSLQDQ 9
HGL+LQ+Q
Sbjct: 20 HGLNLQNQ 27
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 HGLSLQDQM 10
HGL++ D M
Sbjct: 558 HGLTMADDM 566
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 RHGLSLQDQM 10
RH LSL++ M
Sbjct: 4741 RHRLSLKELM 4750
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 GLSLQD 8
GLSLQD
Sbjct: 329 GLSLQD 334
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 GLSLQD 8
GLSLQD
Sbjct: 329 GLSLQD 334
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GLSLQD 8
GLSLQD
Sbjct: 329 GLSLQD 334
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 3 GLSLQD 8
GLSLQD
Sbjct: 329 GLSLQD 334
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 3 GLSLQD 8
GLSLQD
Sbjct: 329 GLSLQD 334
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 HGLSLQDQM 10
HGL++ D M
Sbjct: 557 HGLTMADDM 565
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 2 HGLSLQDQM 10
HG S +D+M
Sbjct: 907 HGSSSEDEM 915
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 2 HGLSLQD 8
+GLS QD
Sbjct: 209 YGLSFQD 215
42|Sequence|206|215|LQDQMVRKAI
***** No hits found ******
43|Sequence|211|220|VRKAIYGPNV
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RKAIYGPNV 10
RKAIY P +
Sbjct: 428 RKAIYAPPI 436
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 VRKAIYGPN 9
V IYGPN
Sbjct: 1549 VLNPIYGPN 1557
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VRKAIYGPNV 10
V KAIY P +
Sbjct: 417 VGKAIYAPPI 426
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 VRKAIYGPNV 10
VRK+ +G N+
Sbjct: 190 VRKSSHGTNI 199
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RKAIYGPNV 10
+KA Y P+V
Sbjct: 2739 KKATYEPDV 2747
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RKAIYGPNV 10
+KA Y P+V
Sbjct: 2736 KKATYEPDV 2744
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RKAIYGPNV 10
+KA Y P+V
Sbjct: 2739 KKATYEPDV 2747
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 RKAIYGPNV 10
+KA Y P+V
Sbjct: 2739 KKATYEPDV 2747
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RKAIYGPNV 10
+KA Y P+V
Sbjct: 2739 KKATYEPDV 2747
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RKAIYGPNV 10
+KA Y P+V
Sbjct: 2739 KKATYEPDV 2747
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 KAIYGPNV 10
KA+ PN+
Sbjct: 2204 KAVLAPNI 2211
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 4 AIYGPNV 10
A YGP V
Sbjct: 857 AYYGPGV 863
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 4 AIYGPNV 10
A YGP V
Sbjct: 857 AYYGPGV 863
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 3 KAIYGPNV 10
KA+ PN+
Sbjct: 873 KAVLAPNI 880
44|Sequence|216|225|YGPNVISIPV
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 YGPNVISIPV 10
Y NVI IPV
Sbjct: 1605 YIGNVIDIPV 1614
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 YGPNVISIPV 10
Y NVI IPV
Sbjct: 1605 YIGNVIDIPV 1614
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 2 GPNVISI 8
GPNV+++
Sbjct: 552 GPNVVTL 558
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 2 GPNVISI 8
GPNV+++
Sbjct: 552 GPNVVTL 558
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PNVISIP 9
PN +S+P
Sbjct: 514 PNSVSLP 520
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PNVISIP 9
PN +S+P
Sbjct: 514 PNSVSLP 520
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 2 GPNVISIP 9
G NV S+P
Sbjct: 389 GTNVTSLP 396
>sp|E320_ADE1A|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 YGPNVISIPV 10
+G V+SIP+
Sbjct: 17 HGQTVVSIPL 26
>sp|E320_ADE35|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 35
Query: 1 YGPNVISIPV 10
+G V+SIP+
Sbjct: 17 HGQTVVSIPL 26
>sp|E320_ADE1P|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 YGPNVISIPV 10
+G V+SIP+
Sbjct: 17 HGQTVVSIPL 26
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 GPNVISIPV 10
GPNV+ + +
Sbjct: 100 GPNVVKLMI 108
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GPNVISIPV 10
GPNV+ + +
Sbjct: 100 GPNVVKLMI 108
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 2 GPNVISIPV 10
GPNV+ + +
Sbjct: 100 GPNVVKLMI 108
>sp|TEG7_HHV2H|TEGUMENT protein UL51|Human herpesvirus 2 (strain HG52)
Query: 2 GPNVISIPV 10
P V S+PV
Sbjct: 192 APEVASVPV 200
45|Sequence|221|230|ISIPVKSYPQ
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 ISIPVKSYPQ 10
+ +PVK Y Q
Sbjct: 3525 VQLPVKDYVQ 3534
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 ISIPVKSYPQ 10
+ +PVK Y Q
Sbjct: 3495 VQLPVKDYVQ 3504
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 ISIPVKSYPQ 10
+ +PVK Y Q
Sbjct: 3525 VQLPVKDYVQ 3534
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 ISIPVKSYPQ 10
+ +PVK Y Q
Sbjct: 3475 VQLPVKDYVQ 3484
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 ISIPVKSYPQ 10
+ +PVK Y Q
Sbjct: 3475 VQLPVKDYVQ 3484
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 ISIPVKSYPQ 10
+ +PVK Y Q
Sbjct: 3495 VQLPVKDYVQ 3504
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 ISIPVKSYPQ 10
I +P+K Y Q
Sbjct: 234 IKLPIKHYEQ 243
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 1 ISIPVKSYPQ 10
I +P+K Y Q
Sbjct: 234 IKLPIKHYEQ 243
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 1 ISIPVKSYPQ 10
I +P+K Y Q
Sbjct: 234 IKLPIKHYEQ 243
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 3 IPVKSYP 9
IPV SYP
Sbjct: 401 IPVGSYP 407
>sp|UL91_HHV7J|PROTEIN U62|Human herpesvirus 7 (strain JI)
Query: 4 PVKSYPQ 10
PV+S+P+
Sbjct: 37 PVESFPK 43
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 SIPVKSYPQ 10
S+P + YP
Sbjct: 860 SVPARDYPH 868
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 SIPVKSYPQ 10
S+P + YP
Sbjct: 860 SVPARDYPH 868
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 SIPVKSYPQ 10
S+P + YP
Sbjct: 860 SVPARDYPH 868
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ISIPVKSYPQ 10
+S+P ++PQ
Sbjct: 491 LSVPTLNFPQ 500
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ISIPVKSYPQ 10
+S+P ++PQ
Sbjct: 491 LSVPTFNFPQ 500
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 1 ISIPVKSY 8
ISI VK+Y
Sbjct: 325 ISIKVKNY 332
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 1 ISIPVKSYPQ 10
+ +PV YP+
Sbjct: 690 VGVPVDLYPR 699
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 ISIPVKS 7
I IP+KS
Sbjct: 1112 IEIPIKS 1118
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 1 ISIPVKSYPQ 10
+ +PV YP+
Sbjct: 692 VGVPVDLYPR 701
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 2 SIPVKSYP 9
++PV +YP
Sbjct: 387 ALPVGAYP 394
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 SIPVKSYP 9
++PV +YP
Sbjct: 388 ALPVGAYP 395
46|Sequence|226|235|KSYPQLLVDE
>sp|VE7_HPV20|PROTEIN E7|Human papillomavirus 20
Query: 1 KSYPQLLVDE 10
+S+ QLL+DE
Sbjct: 76 RSFQQLLIDE 85
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 KSYPQLL 7
K+YPQL
Sbjct: 1740 KNYPQLF 1746
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 KSYPQLLVD 9
KSY +LVD
Sbjct: 1830 KSYGSMLVD 1838
47|Sequence|231|240|LLVDEALNPY
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 2 LVDEALNP 9
L+DEAL+P
Sbjct: 413 LLDEALDP 420
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 2 LVDEALNP 9
L+DEAL+P
Sbjct: 407 LLDEALDP 414
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 2 LVDEALNP 9
L+DEAL+P
Sbjct: 393 LLDEALDP 400
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LLVDEALNPY 10
+LVD LNP+
Sbjct: 6927 ILVDNDLNPF 6936
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LLVDEALNPY 10
+LVD LNP+
Sbjct: 6977 ILVDNDLNPF 6986
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LLVDEALNPY 10
+LVD LNP+
Sbjct: 6947 ILVDNDLNPF 6956
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 LLVDEALNP 9
LL+DE +NP
Sbjct: 2357 LLLDEHMNP 2365
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 LLVDEALNP 9
LL+DE +NP
Sbjct: 2357 LLLDEHMNP 2365
>sp|VE8E2_HPV08|PROTEIN E8^E2C|Human papillomavirus type 8
Query: 2 LVDEALNP 9
L+DEA++P
Sbjct: 217 LLDEAIDP 224
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 2 LVDEALNP 9
L+DEA++P
Sbjct: 408 LLDEAIDP 415
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 2 LVDEALNPY 10
LVD NPY
Sbjct: 26 LVDTFTNPY 34
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 LLVDEALN-PY 10
L+VDEA++ PY
Sbjct: 1552 LVVDEAISGPY 1562
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 2 LVDEALNP 9
L++EAL+P
Sbjct: 419 LLEEALDP 426
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 2 LVDEALNP 9
L++EAL+P
Sbjct: 412 LLEEALDP 419
>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24
Query: 2 LVDEALNP 9
L++EAL+P
Sbjct: 377 LLEEALDP 384
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 2 LVDEALNP 9
L++EAL+P
Sbjct: 403 LLEEALDP 410
>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12
Query: 2 LVDEALNP 9
L++EAL+P
Sbjct: 404 LLEEALDP 411
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 LVDEALNP 9
LVD A NP
Sbjct: 115 LVDAARNP 122
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 4 DEALNPY 10
D+A NPY
Sbjct: 147 DDAENPY 153
>sp|VE7_HPV48|PROTEIN E7|Human papillomavirus type 48
Query: 1 LLVDEALNP 9
L+ DE+L+P
Sbjct: 22 LISDESLSP 30
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LLVDEA 6
LLVDEA
Sbjct: 306 LLVDEA 311
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LLVDEA 6
LLVDEA
Sbjct: 306 LLVDEA 311
>sp|SPI2A_VACCC|PUTATIVE serine proteinase inhibitor 2|Vaccinia virus (strain Copenhagen)
Query: 2 LVDEALNP 9
L+DE L+P
Sbjct: 107 LLDEPLSP 114
>sp|VE7_HPV60|PROTEIN E7|Human papillomavirus type 60
Query: 1 LLVDEALNP 9
LL DE L+P
Sbjct: 24 LLADEELSP 32
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 2 LVDEALNP 9
+VD A NP
Sbjct: 100 VVDRAANP 107
>sp|SPI2_MONPV|SERINE proteinase inhibitor 2|Monkeypox virus (MPXV)
Query: 2 LVDEALNP 9
L+DE L+P
Sbjct: 117 LLDEPLSP 124
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 2 LVDEALN 8
LVD+ALN
Sbjct: 536 LVDKALN 542
>sp|SPI2_CWPXB|SERINE proteinase inhibitor 2|Cowpox virus (strain Brighton Red)
Query: 2 LVDEALNP 9
L+DE L+P
Sbjct: 114 LLDEPLSP 121
48|Sequence|236|245|ALNPYYGFQA
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LNPYYGFQ 9
L P YGFQ
Sbjct: 119 LGPIYGFQ 126
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LNPYYGFQ 9
L P YGFQ
Sbjct: 119 LGPIYGFQ 126
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 2 LNPYYGFQ 9
L P YGFQ
Sbjct: 155 LGPVYGFQ 162
>sp|NEC1_HHV7J|NUCLEAR egress protein 1|Human herpesvirus 7 (strain JI)
Query: 5 YYGFQ 9
YYGFQ
Sbjct: 128 YYGFQ 132
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 LNPYYGFQ 9
+ P YGFQ
Sbjct: 2629 MGPSYGFQ 2636
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 LNPYYGFQ 9
+ P YGFQ
Sbjct: 2606 MGPSYGFQ 2613
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 LNPYYGFQ 9
+ P YGFQ
Sbjct: 2629 MGPSYGFQ 2636
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 LNPYYGFQ 9
+ P YGFQ
Sbjct: 2614 MGPAYGFQ 2621
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 LNPYYG 7
LNP+YG
Sbjct: 147 LNPHYG 152
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 2 LNPYYG 7
LNP+YG
Sbjct: 147 LNPHYG 152
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 LNPYYGFQ 9
+ P YGFQ
Sbjct: 2610 MGPSYGFQ 2617
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 LNPYYGFQ 9
+ P YGFQ
Sbjct: 2610 MGPSYGFQ 2617
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 LNPYYGFQ 9
+ P YGFQ
Sbjct: 2617 MGPAYGFQ 2624
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 LNPYYGFQ 9
+ P YGFQ
Sbjct: 2619 MGPAYGFQ 2626
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 2 LNPYYGFQA 10
++PYY F A
Sbjct: 1 MDPYYPFDA 9
>sp|LHDAG_HDVV3|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 4 PYYGF 8
P+YGF
Sbjct: 194 PWYGF 198
>sp|LHDAG_HDVV2|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 4 PYYGF 8
P+YGF
Sbjct: 194 PWYGF 198
>sp|LHDAG_HDVV1|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 4 PYYGF 8
P+YGF
Sbjct: 194 PWYGF 198
>sp|LHDAG_HDVP1|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 4 PYYGF 8
P+YGF
Sbjct: 194 PWYGF 198
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 LNPYYG 7
LNP YG
Sbjct: 1550 LNPIYG 1555
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 2 LNPYYGFQ 9
++P+YG++
Sbjct: 297 MSPFYGYR 304
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 2 LNPYYGFQ 9
++P+YG++
Sbjct: 297 MSPFYGYR 304
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 2 LNPYYGFQ 9
++P+YG++
Sbjct: 296 MSPFYGYR 303
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 2 LNPYYGFQ 9
++P+YG++
Sbjct: 297 MSPFYGYR 304
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 2 LNPYYGFQ 9
++P+YG++
Sbjct: 292 MSPFYGYR 299
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 2 LNPYYGFQ 9
++P+YG++
Sbjct: 278 MSPFYGYR 285
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 2 LNPYYGFQ 9
++P+YG++
Sbjct: 292 MSPFYGYR 299
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 LNPYYG 7
L+PY+G
Sbjct: 1567 LDPYWG 1572
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 LNPYYG 7
L+PY+G
Sbjct: 1567 LDPYWG 1572
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 LNPYYG 7
L+PY+G
Sbjct: 1563 LDPYWG 1568
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 LNPYYG 7
L+PY+G
Sbjct: 1570 LDPYWG 1575
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 LNPYYG 7
L+PY+G
Sbjct: 1566 LDPYWG 1571
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 LNPYYG 7
L+PY+G
Sbjct: 1570 LDPYWG 1575
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 LNPYYG 7
L+PY+G
Sbjct: 1568 LDPYWG 1573
>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 LNPYYG 7
L+PY+G
Sbjct: 215 LDPYWG 220
>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)
Query: 2 LNPYYG 7
L+PY+G
Sbjct: 220 LDPYWG 225
>sp|NS1_INCTA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 LNPYYG 7
L+PY+G
Sbjct: 215 LDPYWG 220
>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)
Query: 2 LNPYYG 7
L+PY+G
Sbjct: 215 LDPYWG 220
>sp|NS1_INCJH|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 LNPYYG 7
L+PY+G
Sbjct: 215 LDPYWG 220
>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 LNPYYG 7
L+PY+G
Sbjct: 220 LDPYWG 225
>sp|NS1_INCGL|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Great
Query: 2 LNPYYG 7
L+PY+G
Sbjct: 215 LDPYWG 220
>sp|NS1_INCCA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/California/1978)
Query: 2 LNPYYG 7
L+PY+G
Sbjct: 220 LDPYWG 225
>sp|NS1_INCAA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Ann
Query: 2 LNPYYG 7
L+PY+G
Sbjct: 220 LDPYWG 225
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 ALNPY 5
ALNPY
Sbjct: 481 ALNPY 485
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 ALNPY 5
ALNPY
Sbjct: 479 ALNPY 483
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 1 ALNPYYGF 8
ALNP Y F
Sbjct: 484 ALNPNYRF 491
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 1 ALNPYYGF 8
ALNP Y F
Sbjct: 484 ALNPNYRF 491
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 ALNPY 5
ALNPY
Sbjct: 415 ALNPY 419
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 1 ALNPYYGF 8
A+N Y GF
Sbjct: 771 AVNAYRGF 778
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 1 ALNPYYGF 8
A+N Y GF
Sbjct: 779 AVNAYRGF 786
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 LNPYYGFQ 9
L+P+ GF+
Sbjct: 885 LHPHLGFE 892
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 ALNPYYGF 8
A+N Y GF
Sbjct: 779 AVNAYRGF 786
49|Sequence|241|250|YGFQAFSIAL
***** No hits found ******
50|Sequence|246|255|FSIALWLADH
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 FSIALWL 7
F+IA+WL
Sbjct: 2204 FTIAMWL 2210
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 FSIALWL 7
F+IA+WL
Sbjct: 2204 FTIAMWL 2210
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 FSIALWLADH 10
SIALW +H
Sbjct: 1349 LSIALWTINH 1358
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 FSIALWLADH 10
SIALW +H
Sbjct: 1349 LSIALWTINH 1358
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 FSIALWLADH 10
SIALW +H
Sbjct: 1349 LSIALWTINH 1358
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 SIALWLAD 9
+I LW+AD
Sbjct: 2207 TILLWMAD 2214
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 3 IALWLAD 9
IALW+ D
Sbjct: 330 IALWIPD 336
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 3 IALWLAD 9
IALW+ D
Sbjct: 330 IALWIPD 336
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 3 IALWLAD 9
IALW+ D
Sbjct: 330 IALWIPD 336
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 IALWLAD 9
IALW+ D
Sbjct: 330 IALWIPD 336
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 3 IALWLAD 9
IALW+ D
Sbjct: 330 IALWIPD 336
>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)
Query: 1 FSIALWLAD 9
+SI W+AD
Sbjct: 206 YSIESWVAD 214
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 ALWLADH 10
ALW DH
Sbjct: 12 ALWHNDH 18
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 SIALWLADH 10
+IA W A+H
Sbjct: 979 TIAEWEAEH 987
>sp|M2_I80A2|MATRIX protein 2|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 IALWLADH 10
+ LW+ DH
Sbjct: 38 LILWILDH 45
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 6 WLADH 10
WL DH
Sbjct: 452 WLEDH 456
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 6 WLADH 10
WL DH
Sbjct: 467 WLEDH 471
>sp|M2_I60A0|MATRIX protein 2|Influenza A virus (strain A/Ann
Query: 3 IALWLADH 10
+ LW+ DH
Sbjct: 38 LILWILDH 45
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 FSIALWL 7
FSI+ WL
Sbjct: 675 FSISKWL 681
>sp|U18_HHV6U|PUTATIVE immediate early glycoprotein|Human herpesvirus 6A (strain
Query: 2 SIALWLADH 10
++ WL DH
Sbjct: 124 TVNCWLDDH 132
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 5 LWLADH 10
WL DH
Sbjct: 580 FWLPDH 585
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 5 LWLAD 9
LW+AD
Sbjct: 580 LWIAD 584
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 LWLAD 9
LW+AD
Sbjct: 2187 LWMAD 2191
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 LWLAD 9
LW+AD
Sbjct: 2187 LWMAD 2191
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 LWLAD 9
LW+AD
Sbjct: 2187 LWMAD 2191
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 5 LWLADH 10
WL DH
Sbjct: 580 FWLPDH 585
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 5 LWLADH 10
WL DH
Sbjct: 580 FWLPDH 585
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 5 LWLADH 10
WL DH
Sbjct: 580 FWLPDH 585
>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P
Query: 1 FSIALWLADH 10
FS+ ++ DH
Sbjct: 211 FSVIIYALDH 220
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 FSIALWL 7
FSI WL
Sbjct: 667 FSITRWL 673
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 6 WLADH 10
WL DH
Sbjct: 3156 WLRDH 3160
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 5 LWLAD 9
LW+AD
Sbjct: 2216 LWMAD 2220
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 6 WLADH 10
WL DH
Sbjct: 3158 WLRDH 3162
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 FSIALWL 7
FSI WL
Sbjct: 670 FSITQWL 676
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 FSIALWL 7
FSI WL
Sbjct: 663 FSITKWL 669
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 FSIALWL 7
FSI WL
Sbjct: 679 FSITKWL 685
51|Sequence|251|260|WLADHYYWYA
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 3 ADHYYWYA 10
A HY+W+A
Sbjct: 1127 AGHYHWHA 1134
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 2 LADHYYW 8
LAD Y+W
Sbjct: 127 LADDYFW 133
Query: 1 WLADHYYWY 9
W+ YW+
Sbjct: 695 WVIQSAYWF 703
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 2 LADHYYW 8
LAD Y+W
Sbjct: 127 LADDYFW 133
Query: 1 WLADHYYWY 9
W+ YW+
Sbjct: 694 WVIQSAYWF 702
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 LADHYYW 8
LAD Y+W
Sbjct: 127 LADDYFW 133
Query: 1 WLADHYYWY 9
W+ YW+
Sbjct: 695 WVIQSAYWF 703
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 2 LADHYYW 8
LAD Y+W
Sbjct: 127 LADDYFW 133
Query: 1 WLADHYYWY 9
W+ YW+
Sbjct: 695 WVIQSAYWF 703
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 LADHYYW 8
LAD Y+W
Sbjct: 127 LADDYFW 133
Query: 1 WLADHYYWY 9
W+ YW+
Sbjct: 695 WVIQSAYWF 703
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 WLADHYYW 8
W++ YYW
Sbjct: 1841 WISLDYYW 1848
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 HYYWY 9
H+YW+
Sbjct: 3152 HFYWF 3156
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 LADHYY 7
L+DHYY
Sbjct: 294 LSDHYY 299
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 HYYWY 9
H+YW+
Sbjct: 3152 HFYWF 3156
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 DHYYWYA 10
D YYW A
Sbjct: 515 DLYYWTA 521
>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)
Query: 1 WLADHYY 7
WLA H++
Sbjct: 434 WLAIHFF 440
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 1 WLADHY 6
WL DH+
Sbjct: 581 WLPDHF 586
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 1 WLADHY 6
WL DH+
Sbjct: 581 WLPDHF 586
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 WLADHY 6
WL DH+
Sbjct: 581 WLPDHF 586
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 WLADHY 6
WL DH+
Sbjct: 581 WLPDHF 586
>sp|W_NIPAV|PROTEIN W|Nipah virus
Query: 2 LADHYY 7
+A+HYY
Sbjct: 208 IAEHYY 213
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 2 LADHYY 7
+A+HYY
Sbjct: 208 IAEHYY 213
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 2 LADHYY 7
+A+HYY
Sbjct: 208 IAEHYY 213
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 WLADHYYWY 9
++AD YW+
Sbjct: 1129 YVADFAYWF 1137
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 WLADHYYW 8
WL Y W
Sbjct: 274 WLGQQYCW 281
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 WLADHYYWY 9
++AD YW+
Sbjct: 1186 YVADFAYWF 1194
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 WLADHYYWY 9
++AD YW+
Sbjct: 1129 YVADFAYWF 1137
Query: 2 LADHYYWY 9
+AD YY Y
Sbjct: 4602 IADSYYSY 4609
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 WLADHYYWY 9
++AD YW+
Sbjct: 1166 YVADFAYWF 1174
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 WLADHYYWY 9
++AD YW+
Sbjct: 1166 YVADFAYWF 1174
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 WLADHYYWY 9
++AD YW+
Sbjct: 1186 YVADFAYWF 1194
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 5 HYYWYA 10
HY W++
Sbjct: 61 HYSWFS 66
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 5 HYYWYA 10
HY W++
Sbjct: 61 HYSWFS 66
>sp|NCAP_CVHN1|NUCLEOPROTEIN coronavirus HKU1 (isolate N1)
Query: 5 HYYWYA 10
HY W++
Sbjct: 61 HYSWFS 66
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 WLADHY 6
WL HY
Sbjct: 651 WLKGHY 656
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 WLADHY 6
WL HY
Sbjct: 651 WLKGHY 656
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 WLADHY 6
WL HY
Sbjct: 651 WLKGHY 656
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 WLADHYYWY 9
++AD YW+
Sbjct: 1216 FVADFAYWF 1224
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 WLADHYYWY 9
++AD YW+
Sbjct: 1216 FVADFAYWF 1224
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 LADHYYWYA 10
L+ YYW A
Sbjct: 1289 LSSLYYWIA 1297
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 HYYWY 9
HY++Y
Sbjct: 36 HYFYY 40
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 5 HYYWY 9
HY++Y
Sbjct: 36 HYFYY 40
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 5 HYYWY 9
HY++Y
Sbjct: 36 HYFYY 40
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 5 HYYWY 9
HY++Y
Sbjct: 36 HYFYY 40
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 HYYWY 9
HY++Y
Sbjct: 36 HYFYY 40
>sp|M2_I80A2|MATRIX protein 2|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 WLADHYYW 8
W+ DH ++
Sbjct: 41 WILDHLFF 48
>sp|M2_I60A0|MATRIX protein 2|Influenza A virus (strain A/Ann
Query: 1 WLADHYYW 8
W+ DH ++
Sbjct: 41 WILDHLFF 48
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 WLADHYYWY 9
W AD W+
Sbjct: 80 WPADSSLWF 88
Query: 5 HYYW 8
HY+W
Sbjct: 18 HYWW 21
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 DHYY 7
DHYY
Sbjct: 81 DHYY 84
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 DHYY 7
DHYY
Sbjct: 81 DHYY 84
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 DHYY 7
DHYY
Sbjct: 81 DHYY 84
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 WLADHYY 7
WL H+Y
Sbjct: 197 WLYFHFY 203
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 WLADHYY 7
WL H+Y
Sbjct: 197 WLYFHFY 203
>sp|SCP_HHV8P|SMALL capsomere-interacting protein|Human herpesvirus 8 type P
Query: 2 LADHYY 7
+A HYY
Sbjct: 53 IAHHYY 58
>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 WLADHYY 7
W+ D Y+
Sbjct: 317 WVGDKYF 323
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 5 HYYW 8
HY+W
Sbjct: 680 HYHW 683
52|Sequence|256|265|YYWYALCIFL
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 4 YALCIFL 10
Y LCIFL
Sbjct: 16 YGLCIFL 22
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 YYWYALCIFL 10
++W LCI L
Sbjct: 768 FFWVQLCIPL 777
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 YYWYALCIFL 10
++W LCI L
Sbjct: 768 FFWVQLCIPL 777
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 1 YYWYALCIFL 10
++W LCI L
Sbjct: 768 FFWVQLCIPL 777
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WYALCIFL 10
W+ LC+ L
Sbjct: 2990 WFMLCLLL 2997
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WYALCIFL 10
W+ LC+ L
Sbjct: 2990 WFPLCLLL 2997
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WYALCIFL 10
W+ LC+ L
Sbjct: 2990 WFMLCLLL 2997
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WYALCIFL 10
W+ LC+ L
Sbjct: 2990 WFMLCLLL 2997
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WYALCIFL 10
W+ LC+ L
Sbjct: 2990 WFMLCLLL 2997
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 WYALCIFL 10
W AL IFL
Sbjct: 1066 WVALNIFL 1073
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 WYALCI 8
W ALC+
Sbjct: 110 WVALCL 115
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 WYALCI 8
W ALC+
Sbjct: 110 WVALCL 115
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 WYALCI 8
W ALC+
Sbjct: 110 WVALCL 115
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 WYALCI 8
W ALC+
Sbjct: 110 WVALCL 115
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 WYALCI 8
W ALC+
Sbjct: 110 WVALCL 115
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 WYALCI 8
W ALC+
Sbjct: 110 WVALCL 115
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 WYALCI 8
W ALC+
Sbjct: 110 WVALCL 115
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 WYALCI 8
W ALC+
Sbjct: 110 WVALCL 115
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 WYALCI 8
W ALC+
Sbjct: 110 WVALCL 115
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 WYALCIFL 10
W+ L IFL
Sbjct: 1088 WHCLNIFL 1095
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 WYALCIFL 10
W AL IFL
Sbjct: 1066 WPALNIFL 1073
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 YYWYALCIFL 10
+ W LCI L
Sbjct: 759 FLWAQLCIPL 768
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 1 YYWYALCIFL 10
YY+ A+ IF+
Sbjct: 446 YYFVAVYIFV 455
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 5 ALCIFL 10
ALCIF+
Sbjct: 213 ALCIFI 218
>sp|UL17_HCMVM|PROTEIN UL17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YWYALC 7
+W+ LC
Sbjct: 71 FWHDLC 76
>sp|UL17_HCMVA|UNCHARACTERIZED protein UL17|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 YWYALC 7
+W+ LC
Sbjct: 71 FWHDLC 76
>sp|UL17_HCMVT|PROTEIN UL17|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 YWYALC 7
+W+ LC
Sbjct: 71 FWHDLC 76
>sp|UL144_HCMVM|MEMBRANE glycoprotein UL144|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 WYALCIFL 10
W +L IFL
Sbjct: 136 WLSLFIFL 143
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 WYALCIFL 10
W A C+++
Sbjct: 2958 WCAHCVYI 2965
53|Sequence|261|270|LCIFLISSIS
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LCIFLISSIS 10
LC+FL+ S++
Sbjct: 3636 LCLFLLPSLA 3645
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LCIFLISSIS 10
LC+FL+ S++
Sbjct: 3613 LCLFLLPSLA 3622
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 LCIFLISSIS 10
LC+FL+ S++
Sbjct: 3636 LCLFLLPSLA 3645
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 LCIFLISSIS 10
LC+FL+ S++
Sbjct: 3613 LCLFLLPSLA 3622
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 LCIFLISSI 9
LCIF+I I
Sbjct: 214 LCIFIIMII 222
>sp|UL04_HCMVM|ENVELOPE glycoprotein UL4|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LCIFLISSIS 10
CIF+ SIS
Sbjct: 19 FCIFVSCSIS 28
>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)
Query: 1 LCIFLISSIS 10
LC+FL+ +
Sbjct: 320 LCLFLLRRVK 329
>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LCIFLISSIS 10
LC+FL+ +
Sbjct: 320 LCLFLLRRVK 329
54|Sequence|266|275|ISSISICLSL
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 1 ISSISICLS 9
+SS+S+C++
Sbjct: 95 LSSVSLCVN 103
55|Sequence|271|280|ICLSLYKTRK
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 CLSLYKTRK 10
CL +KTRK
Sbjct: 420 CLWAFKTRK 428
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 ICLSLYKTRK 10
+C+ L TRK
Sbjct: 488 LCIKLKHTRK 497
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 1 ICLSLYKT 8
+C+S Y T
Sbjct: 577 VCISTYTT 584
>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 3 LSLYKTRK 10
LSLYK+ K
Sbjct: 14 LSLYKSLK 21
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 CLSLYKT 8
C SLY T
Sbjct: 75 CRSLYNT 81
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 CLSLYKT 8
C SLY T
Sbjct: 75 CRSLYNT 81
>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)
Query: 3 LSLYKTRK 10
L+LY T+K
Sbjct: 14 LALYTTKK 21
56|Sequence|276|285|YKTRKQSQTL
>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18
Query: 1 YKTRKQSQT 9
YKT KQS T
Sbjct: 18 YKTCKQSGT 26
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 1 YKTRKQSQT 9
YKT KQS T
Sbjct: 20 YKTCKQSGT 28
>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61
Query: 1 YKTRKQSQT 9
Y+T KQS T
Sbjct: 15 YRTCKQSGT 23
>sp|VL2_HPVME|MINOR capsid protein L2|Human papillomavirus type ME180
Query: 1 YKTRKQSQT 9
YKT KQS T
Sbjct: 18 YKTCKQSGT 26
>sp|VL2_HPV70|MINOR capsid protein L2|Human papillomavirus type 70
Query: 1 YKTRKQSQT 9
YKT KQS T
Sbjct: 18 YKTCKQSGT 26
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 3 TRKQSQ 8
TRKQSQ
Sbjct: 233 TRKQSQ 238
57|Sequence|281|290|QSQTLRDMVK
>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain
Query: 2 SQTLRDMVK 10
S T+R MVK
Sbjct: 272 SDTIRQMVK 280
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 2 SQTLRDMVK 10
SQTLR+ ++
Sbjct: 368 SQTLREYLR 376
58|Sequence|286|295|RDMVKLSMRV
***** No hits found ******
59|Sequence|291|300|LSMRVCVCRP
>sp|UNG_VARV|URACIL-DNA glycosylase|Variola virus
Query: 4 RVCVC 8
RVCVC
Sbjct: 61 RVCVC 65
>sp|UNG_VAR67|URACIL-DNA glycosylase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 RVCVC 8
RVCVC
Sbjct: 61 RVCVC 65
>sp|UNG_VACCC|URACIL-DNA glycosylase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 RVCVC 8
RVCVC
Sbjct: 61 RVCVC 65
>sp|UNG_VACCA|URACIL-DNA glycosylase|Vaccinia virus (strain Ankara) (VACV)
Query: 4 RVCVC 8
RVCVC
Sbjct: 61 RVCVC 65
>sp|UNG_MONPV|URACIL-DNA glycosylase|Monkeypox virus (MPXV)
Query: 4 RVCVC 8
RVCVC
Sbjct: 61 RVCVC 65
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 LSMRVCVC 8
+ MR CVC
Sbjct: 1 MQMRGCVC 8
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 5 VCVCR 9
VCVCR
Sbjct: 289 VCVCR 293
>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967
Query: 5 VCVCR 9
VCVCR
Sbjct: 289 VCVCR 293
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 5 VCVCR 9
VCVCR
Sbjct: 289 VCVCR 293
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 5 VCVCR 9
VCVCR
Sbjct: 289 VCVCR 293
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SMRVCVCR 9
S VC+CR
Sbjct: 42 SAVVCICR 49
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 1 LSMRVCVC 8
+ MRVCVC
Sbjct: 86 IYMRVCVC 93
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 SMRVCV 7
S+RVCV
Sbjct: 1161 SLRVCV 1166
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 SMRVCV 7
S+RVCV
Sbjct: 1161 SLRVCV 1166
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 RVCVCR 9
+ CVCR
Sbjct: 562 QFCVCR 567
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 2 SMRVCVCR 9
S VC+CR
Sbjct: 42 STFVCMCR 49
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 2 SMRVCVCR 9
S +CVCR
Sbjct: 286 SKVMCVCR 293
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 2 SMRVCVCR 9
S +CVCR
Sbjct: 286 SKVMCVCR 293
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 6 CVCRP 10
CVC P
Sbjct: 1132 CVCGP 1136
>sp|ORF52_HHV8P|TEGUMENT protein ORF52|Human herpesvirus 8 type P
Query: 1 LSMRVCVC 8
LS+R+ VC
Sbjct: 94 LSLRIDVC 101
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 6 CVCR 9
CVCR
Sbjct: 275 CVCR 278
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P
Query: 4 RVCVCRP 10
RVC+ RP
Sbjct: 111 RVCLLRP 117
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 5 VCVCR 9
+CVCR
Sbjct: 274 MCVCR 278
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 6 CVCR 9
CVCR
Sbjct: 290 CVCR 293
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 6 CVCR 9
CVCR
Sbjct: 290 CVCR 293
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 5 VCVCR 9
+CVCR
Sbjct: 289 MCVCR 293
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 6 CVCR 9
CVCR
Sbjct: 290 CVCR 293
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 6 CVCR 9
CVCR
Sbjct: 290 CVCR 293
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 6 CVCR 9
CVCR
Sbjct: 270 CVCR 273
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 2 SMRVCVCRP 10
S +C+C P
Sbjct: 366 STNMCLCVP 374
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 5 VCVCR 9
+CVCR
Sbjct: 273 MCVCR 277
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 6 CVCR 9
CVCR
Sbjct: 270 CVCR 273
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 6 CVCR 9
CVCR
Sbjct: 290 CVCR 293
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 6 CVCR 9
CVCR
Sbjct: 270 CVCR 273
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 6 CVCR 9
CVCR
Sbjct: 270 CVCR 273
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 6 CVCR 9
CVCR
Sbjct: 270 CVCR 273
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 6 CVCR 9
CVCR
Sbjct: 270 CVCR 273
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 5 VCVCR 9
VC CR
Sbjct: 45 VCTCR 49
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 5 VCVCRP 10
+C C+P
Sbjct: 796 ICCCKP 801
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 5 VCVCRP 10
+C C+P
Sbjct: 796 ICCCKP 801
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 6 CVCR 9
CVCR
Sbjct: 287 CVCR 290
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 6 CVCR 9
CVCR
Sbjct: 270 CVCR 273
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 6 CVCR 9
CVCR
Sbjct: 270 CVCR 273
>sp|E4RF1_ADE02|EARLY 4 ORF1 protein|Human adenovirus C serotype 2
Query: 1 LSMRVCVCRP 10
LS+R+ VC P
Sbjct: 47 LSLRLRVCIP 56
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 6 CVCR 9
CVCR
Sbjct: 287 CVCR 290
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 6 CVCR 9
CVCR
Sbjct: 262 CVCR 265
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 6 CVCR 9
CVCR
Sbjct: 289 CVCR 292
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 6 CVCR 9
CVCR
Sbjct: 271 CVCR 274
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 6 CVCR 9
CVCR
Sbjct: 271 CVCR 274
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 6 CVCR 9
CVCR
Sbjct: 270 CVCR 273
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 6 CVCR 9
CVCR
Sbjct: 290 CVCR 293
>sp|UL38_HCMVM|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 MRVCVCRP 10
+ VC+C P
Sbjct: 61 LYVCICDP 68
>sp|UL38_HCMVA|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 MRVCVCRP 10
+ VC+C P
Sbjct: 61 LYVCICDP 68
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 6 CVCR 9
CVCR
Sbjct: 288 CVCR 291
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 1 LSMRVCVC 8
L R CVC
Sbjct: 611 LERRECVC 618
60|Sequence|296|305|CVCRPGGEEE
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 CVCRPGGEE 9
CVC P G E
Sbjct: 1132 CVCGPTGSE 1140
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CVCRPGGEE 9
CVCR G E
Sbjct: 173 CVCRELGHE 181
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CVCRPGGEE 9
CVCR G E
Sbjct: 173 CVCRELGHE 181
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CVCRPGGEE 9
CVCR G E
Sbjct: 173 CVCRELGHE 181
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 3 CRPGGEEE 10
C+ GGE+E
Sbjct: 371 CKAGGEDE 378
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 3 CRPGGEEE 10
C+ GGE+E
Sbjct: 371 CKAGGEDE 378
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 3 CRPGGEEE 10
C+ GGE+E
Sbjct: 371 CKAGGEDE 378
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 3 CRPGGEEE 10
C+ GGE+E
Sbjct: 371 CKAGGEDE 378
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 3 CRPGGEEE 10
C+ GGE+E
Sbjct: 372 CKAGGEDE 379
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 3 CRPGGEEE 10
C+ GGE+E
Sbjct: 372 CKAGGEDE 379
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 CRPGGEEE 10
RPGG EE
Sbjct: 234 ARPGGPEE 241
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 CRPGGEEE 10
CRPG +E
Sbjct: 2242 CRPGTLKE 2249
>sp|US11_HCMVA|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 CVCRPGGEEE 10
CV R GG E
Sbjct: 56 CVLRSGGRLE 65
>sp|US11_HCMVM|MEMBRANE glycoprotein US11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CVCRPGGEEE 10
CV R GG E
Sbjct: 56 CVLRSGGRLE 65
>sp|US11_HCMVT|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 1 CVCRPGGEEE 10
CV R GG E
Sbjct: 56 CVLRSGGRLE 65
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 3 CRPGGEEE 10
CRPG + E
Sbjct: 425 CRPGSQVE 432
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 VCRPGGE 8
VC+ GGE
Sbjct: 1416 VCKLGGE 1422
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 VCRPGGE 8
VC+ GGE
Sbjct: 1706 VCQCGGE 1712
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 VCRPGGE 8
VC+ GGE
Sbjct: 1706 VCQCGGE 1712
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKQ 28
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKQ 28
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKQ 28
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 1 CVCRPGG 7
C+C GG
Sbjct: 392 CLCLKGG 398
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 4 RPGGEEE 10
RP GE+E
Sbjct: 81 RPVGEDE 87
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PGGEEE 10
PGG+E+
Sbjct: 59 PGGDED 64
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 1 CVCRPGGEE 9
CV R G E
Sbjct: 169 CVMRQNGRE 177
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKQ 28
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VCRPGGE 8
VC P GE
Sbjct: 607 VCTPTGE 613
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 3 CRPG 6
CRPG
Sbjct: 680 CRPG 683
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKQ 28
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 RPGGEEE 10
RPGG+++
Sbjct: 22 RPGGKKK 28
61|Sequence|301|310|GGEEEWVDSS
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 2 GEEEWVDS 9
GEE W D+
Sbjct: 196 GEESWTDT 203
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 2 GEEEWVDS 9
GEE W D+
Sbjct: 193 GEESWTDT 200
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 4 EEWVDS 9
E+W+DS
Sbjct: 1661 EQWIDS 1666
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 GGEEEWVD 8
G+EEW +
Sbjct: 708 AGDEEWAE 715
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 EEEWVD 8
EE+W+D
Sbjct: 976 EEDWLD 981
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 EEEWVD 8
EE+W+D
Sbjct: 976 EEDWLD 981
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 2 GEEEWV 7
G+EEW+
Sbjct: 418 GDEEWM 423
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 2 GEEEWV 7
G+EEW+
Sbjct: 418 GDEEWM 423
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GEEEWV 7
G+EEW+
Sbjct: 418 GDEEWM 423
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 GEEEWV 7
G+EEW+
Sbjct: 418 GDEEWM 423
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 2 GEEEWV 7
G+EEW+
Sbjct: 418 GDEEWM 423
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 2 GEEEWVDSS 10
G+EEW + +
Sbjct: 715 GDEEWEEDT 723
>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4
Query: 2 GEEEWVDSS 10
G + WVD++
Sbjct: 89 GNDSWVDTN 97
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 1 GGEEEWVDSS 10
G +EE +D+S
Sbjct: 203 GAKEELIDAS 212
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 EEEWVDS 9
EE+W DS
Sbjct: 6 EEKWGDS 12
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 5 EWVDS 9
EWVDS
Sbjct: 158 EWVDS 162
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 EEEWV 7
+EEWV
Sbjct: 632 QEEWV 636
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 3 EEEWV 7
+EEWV
Sbjct: 632 QEEWV 636
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 3 EEEWV 7
+EEWV
Sbjct: 632 QEEWV 636
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 EWVDS 9
EWVDS
Sbjct: 158 EWVDS 162
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 EWVDS 9
EWVDS
Sbjct: 158 EWVDS 162
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 EWVDS 9
EWVDS
Sbjct: 158 EWVDS 162
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 EWVDS 9
EWVDS
Sbjct: 158 EWVDS 162
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 GEEEW 6
G EEW
Sbjct: 263 GSEEW 267
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 2 GEEEW 6
G EEW
Sbjct: 263 GSEEW 267
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 EWVDS 9
EWVDS
Sbjct: 158 EWVDS 162
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 EWVDS 9
EWVDS
Sbjct: 158 EWVDS 162
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GEEEWVD 8
GE+ W D
Sbjct: 665 GEDSWYD 671
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GEEEWVD 8
GE+ W D
Sbjct: 664 GEDSWYD 670
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 GEEEWVD 8
G+EE+VD
Sbjct: 3363 GKEEYVD 3369
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 GEEEWVD 8
G+EE+VD
Sbjct: 3363 GKEEYVD 3369
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 GEEEWVD 8
G+EE+VD
Sbjct: 3363 GKEEYVD 3369
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 GEEEWVD 8
G+EE+VD
Sbjct: 3363 GKEEYVD 3369
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 GEEEWVD 8
G+EE+VD
Sbjct: 3363 GKEEYVD 3369
62|Sequence|306|315|WVDSSELVPG
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 1 WVDSSELVPG 10
+VDS L PG
Sbjct: 436 FVDSQRLTPG 445
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 3 DSSELVPG 10
DSS LVPG
Sbjct: 266 DSSSLVPG 273
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 3 DSSELVPG 10
DSS LVPG
Sbjct: 266 DSSSLVPG 273
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 1 WVDSSELVP 9
W DS L P
Sbjct: 388 WTDSDALAP 396
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 1 WVDSSELVP 9
W DS L P
Sbjct: 388 WTDSEALAP 396
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 1 WVDSSELVP 9
W DS L P
Sbjct: 388 WTDSDALAP 396
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 1 WVDSSELVP 9
W DS L P
Sbjct: 387 WTDSDALAP 395
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 1 WVDSSELVP 9
W DS L P
Sbjct: 387 WTDSDALAP 395
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 1 WVDSSELVP 9
W DS L P
Sbjct: 387 WTDSDALAP 395
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 1 WVDSSELVP 9
W DS L P
Sbjct: 388 WTDSDALAP 396
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 1 WVDSSELVP 9
W DS L P
Sbjct: 388 WTDSDALAP 396
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 1 WVDSSELVP 9
W DS L P
Sbjct: 388 WTDSDALAP 396
>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain
Query: 1 WVDSSELVPG 10
+VD+S +PG
Sbjct: 88 YVDTSLTIPG 97
>sp|UL20_HHV2H|PROTEIN UL20|Human herpesvirus 2 (strain HG52)
Query: 1 WVDSSELVP 9
W+ +S+L+P
Sbjct: 163 WITASQLLP 171
>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)
Query: 1 WVDSSELVPG 10
W+ L+PG
Sbjct: 181 WIKKRGLMPG 190
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 DSSELVPG 10
DSS+ PG
Sbjct: 873 DSSDQAPG 880
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VDSSELVP 9
+DS +++P
Sbjct: 800 IDSGDIIP 807
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 1 WVDSSELVPG 10
W+ + +VPG
Sbjct: 390 WLQNPRVVPG 399
63|Sequence|311|320|ELVPGDCLVL
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 LVPGDCL 8
L PGDCL
Sbjct: 363 LTPGDCL 369
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 4 PGDCLVL 10
PGDC VL
Sbjct: 180 PGDCPVL 186
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 4 PGDCL 8
PGDCL
Sbjct: 32 PGDCL 36
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 4 PGDCL 8
PGDCL
Sbjct: 32 PGDCL 36
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 ELVPGDC 7
+L PGDC
Sbjct: 206 QLQPGDC 212
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 ELVPGDCLV 9
+L+ GDCL+
Sbjct: 1149 KLLDGDCLI 1157
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 2 LVPGDCLV 9
+VP DC++
Sbjct: 235 MVPNDCML 242
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 4 PGDCLVL 10
P DC+VL
Sbjct: 536 PSDCVVL 542
Query: 4 PGDC 7
PGDC
Sbjct: 966 PGDC 969
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 4 PGDCLVL 10
P DC+VL
Sbjct: 536 PSDCVVL 542
Query: 4 PGDC 7
PGDC
Sbjct: 976 PGDC 979
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 VPGDC 7
+PGDC
Sbjct: 1234 IPGDC 1238
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 VPGDC 7
+PGDC
Sbjct: 1235 IPGDC 1239
>sp|ICP22_VZVO|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 VPGDC 7
VPGDC
Sbjct: 209 VPGDC 213
>sp|ICP22_VZVD|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 VPGDC 7
VPGDC
Sbjct: 209 VPGDC 213
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 4 PGDCLVL 10
P DC+VL
Sbjct: 537 PTDCIVL 543
Query: 4 PGDC 7
PGDC
Sbjct: 969 PGDC 972
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 2 LVPGDCL 8
L P DCL
Sbjct: 750 LAPSDCL 756
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 PGDCLV 9
PGDC++
Sbjct: 2248 PGDCVL 2253
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 PGDCLV 9
PGDC++
Sbjct: 2248 PGDCVL 2253
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 PGDCLV 9
PGDC++
Sbjct: 2240 PGDCVL 2245
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 1 ELVPGDCL 8
E PG CL
Sbjct: 400 EYTPGSCL 407
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 ELVPGDCL 8
E PG CL
Sbjct: 400 EYTPGSCL 407
>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain
Query: 4 PGDCLVL 10
PG CLV
Sbjct: 379 PGKCLVF 385
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 4 PGDCLVL 10
PG CLV
Sbjct: 378 PGKCLVF 384
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 2 LVPGDC 7
+ PGDC
Sbjct: 181 ITPGDC 186
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 ELVPGDCL 8
EL+P +CL
Sbjct: 1953 ELMPENCL 1960
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 2 LVPGDCLVL 10
L+PGD L L
Sbjct: 604 LIPGDSLHL 612
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 LVPGDCLV 9
+VP DC +
Sbjct: 1447 IVPADCQI 1454
Query: 4 PGDC 7
PGDC
Sbjct: 956 PGDC 959
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 ELVPGDCLV 9
+L+P C+V
Sbjct: 588 KLIPSTCMV 596
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 ELVPGDCLV 9
+L+P C+V
Sbjct: 588 KLIPSTCMV 596
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 4 PGDC 7
PGDC
Sbjct: 182 PGDC 185
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 4 PGDC 7
PGDC
Sbjct: 183 PGDC 186
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 4 PGDC 7
PGDC
Sbjct: 181 PGDC 184
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 4 PGDC 7
PGDC
Sbjct: 179 PGDC 182
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 1 ELVPGDCLV 9
+L+P C+V
Sbjct: 588 KLIPSTCMV 596
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 4 PGDC 7
PGDC
Sbjct: 984 PGDC 987
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 4 PGDC 7
PGDC
Sbjct: 984 PGDC 987
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 4 PGDC 7
PGDC
Sbjct: 985 PGDC 988
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 4 PGDC 7
PGDC
Sbjct: 985 PGDC 988
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 4 PGDC 7
PGDC
Sbjct: 987 PGDC 990
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 4 PGDC 7
PGDC
Sbjct: 987 PGDC 990
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 4 PGDC 7
PGDC
Sbjct: 1144 PGDC 1147
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 4 PGDC 7
PGDC
Sbjct: 969 PGDC 972
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 4 PGDC 7
PGDC
Sbjct: 961 PGDC 964
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 4 PGDC 7
PGDC
Sbjct: 953 PGDC 956
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 4 PGDC 7
PGDC
Sbjct: 960 PGDC 963
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 4 PGDC 7
PGDC
Sbjct: 960 PGDC 963
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 PGDC 7
PGDC
Sbjct: 948 PGDC 951
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 4 PGDC 7
PGDC
Sbjct: 962 PGDC 965
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 PGDC 7
PGDC
Sbjct: 969 PGDC 972
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 PGDC 7
PGDC
Sbjct: 969 PGDC 972
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 4 PGDC 7
PGDC
Sbjct: 971 PGDC 974
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 4 PGDC 7
PGDC
Sbjct: 967 PGDC 970
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 4 PGDC 7
PGDC
Sbjct: 966 PGDC 969
Query: 1 ELVPGDCL 8
++VPGD +
Sbjct: 609 QVVPGDTM 616
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 4 PGDC 7
PGDC
Sbjct: 968 PGDC 971
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 4 PGDC 7
PGDC
Sbjct: 964 PGDC 967
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 4 PGDC 7
PGDC
Sbjct: 957 PGDC 960
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 4 PGDC 7
PGDC
Sbjct: 957 PGDC 960
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 4 PGDC 7
PGDC
Sbjct: 958 PGDC 961
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 4 PGDC 7
PGDC
Sbjct: 956 PGDC 959
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 4 PGDC 7
PGDC
Sbjct: 956 PGDC 959
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 4 PGDC 7
PGDC
Sbjct: 958 PGDC 961
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 4 PGDC 7
PGDC
Sbjct: 958 PGDC 961
Query: 1 ELVPGDCL 8
++VPGD +
Sbjct: 611 QVVPGDTM 618
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 4 PGDC 7
PGDC
Sbjct: 960 PGDC 963
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 4 PGDC 7
PGDC
Sbjct: 955 PGDC 958
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 4 PGDC 7
PGDC
Sbjct: 974 PGDC 977
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 4 PGDC 7
PGDC
Sbjct: 992 PGDC 995
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 4 PGDC 7
PGDC
Sbjct: 985 PGDC 988
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 PGDC 7
PGDC
Sbjct: 969 PGDC 972
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 PGDC 7
PGDC
Sbjct: 969 PGDC 972
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 4 PGDC 7
PGDC
Sbjct: 209 PGDC 212
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 5 GDCLVL 10
G+CLVL
Sbjct: 252 GECLVL 257
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 5 GDCLVL 10
G+CLVL
Sbjct: 252 GECLVL 257
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LVPGDCL 8
L+PG CL
Sbjct: 173 LMPGICL 179
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LVPGDCL 8
L+PG CL
Sbjct: 173 LMPGICL 179
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LVPGDCL 8
L+PG CL
Sbjct: 173 LMPGICL 179
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 3 VPGDCLV 9
VPG C++
Sbjct: 232 VPGGCMM 238
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 3 VPGDCLV 9
VPG C++
Sbjct: 232 VPGGCMM 238
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 3 VPGDCLV 9
VPG C++
Sbjct: 232 VPGGCMM 238
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 3 VPGDCLV 9
VPG C++
Sbjct: 232 VPGGCMM 238
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LVPGDCLVL 10
L PG CL L
Sbjct: 124 LSPGRCLRL 132
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LVPGDCLVL 10
L PG CL L
Sbjct: 124 LSPGRCLRL 132
>sp|UL141_HCMVM|PROTEIN UL141|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 VPGDC 7
+PGDC
Sbjct: 243 LPGDC 247
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 LVPGDCLV 9
+VPGD ++
Sbjct: 279 VVPGDVII 286
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 ELVPGDCL 8
+++PG CL
Sbjct: 356 DVLPGHCL 363
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 LVPGDCLV 9
+VPGD ++
Sbjct: 279 VVPGDVII 286
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 ELVPGDCL 8
++VPGD +
Sbjct: 611 QVVPGDTI 618
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 3 VPGDCL 8
V GDCL
Sbjct: 707 VTGDCL 712
64|Sequence|316|325|DCLVLPQEGG
>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)
Query: 3 LVLPQEG 9
L+LPQEG
Sbjct: 151 LLLPQEG 157
>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LVLPQEG 9
L+LPQEG
Sbjct: 151 LLLPQEG 157
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 1 DCLVLP 6
+CLVLP
Sbjct: 374 ECLVLP 379
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 1 DCLVLP 6
+CLVLP
Sbjct: 374 ECLVLP 379
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 2 CLVLPQ 7
CL+LP+
Sbjct: 329 CLILPE 334
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 CLVLPQ 7
CL+LP+
Sbjct: 2162 CLILPE 2167
>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7
Query: 4 VLPQEGG 10
V+P EGG
Sbjct: 126 VIPTEGG 132
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 CLVLPQEGG 10
CL P GG
Sbjct: 1022 CLRYPHRGG 1030
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CLVLPQEGG 10
CL P GG
Sbjct: 1022 CLRYPHRGG 1030
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 1 DCLVLP 6
+CL+LP
Sbjct: 374 ECLILP 379
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 1 DCLVLP 6
+CL+LP
Sbjct: 374 ECLILP 379
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 DCLVLP 6
DC+ LP
Sbjct: 6947 DCMTLP 6952
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 DCLVLP 6
DC+ LP
Sbjct: 6967 DCMTLP 6972
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 DCLVLP 6
DC+ LP
Sbjct: 6997 DCMTLP 7002
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 VLPQEGG 10
V+PQE G
Sbjct: 1257 VIPQESG 1263
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 VLPQEGG 10
V+PQE G
Sbjct: 1257 VIPQESG 1263
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 2 CLVLPQ 7
CLVLP+
Sbjct: 256 CLVLPK 261
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 1 DCLVLPQEG 9
DC+ LP++
Sbjct: 304 DCVFLPKDA 312
Query: 1 DCLVLPQE 8
+CL LP++
Sbjct: 20 ECLALPRD 27
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 VLPQEGG 10
V+PQE G
Sbjct: 1259 VIPQESG 1265
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 VLPQEGG 10
V+PQE G
Sbjct: 1256 VIPQESG 1262
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DCLVLPQEG 9
DC+ LP++
Sbjct: 304 DCVFLPKDA 312
Query: 1 DCLVLPQE 8
+CL LP++
Sbjct: 20 ECLALPRD 27
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 VLPQEGG 10
V+PQE G
Sbjct: 1258 VIPQESG 1264
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 VLPQEGG 10
V+PQE G
Sbjct: 1259 VIPQESG 1265
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 VLPQEGG 10
V+PQE G
Sbjct: 1257 VIPQESG 1263
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 DCLVLP 6
DC+ LP
Sbjct: 6910 DCITLP 6915
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 DCLVLPQE 8
DC + PQ+
Sbjct: 607 DCCIEPQD 614
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 VLPQEGG 10
V+PQE G
Sbjct: 1258 VIPQESG 1264
>sp|UL30_HCMVM|UNCHARACTERIZED protein UL30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CLVLP 6
CLVLP
Sbjct: 97 CLVLP 101
>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)
Query: 2 CLVLPQ 7
CLVLP+
Sbjct: 256 CLVLPK 261
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CLVLPQ 7
CL+LP+
Sbjct: 158 CLILPR 163
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 DCLVLPQ 7
DC ++PQ
Sbjct: 830 DCGIVPQ 836
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 CLVLPQEG 9
CL LP+ G
Sbjct: 267 CLFLPRLG 274
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 CLVLPQEG 9
CL LP+ G
Sbjct: 249 CLFLPRLG 256
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 DCLVLP 6
DC V+P
Sbjct: 1368 DCCVIP 1373
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 DCLVLP 6
DC V+P
Sbjct: 1368 DCCVIP 1373
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 DCLVLP 6
DC V+P
Sbjct: 1368 DCCVIP 1373
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 3 LVLPQEGG 10
+VLP E G
Sbjct: 1071 IVLPSENG 1078
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 3 LVLPQEGG 10
+VLP E G
Sbjct: 1071 IVLPSENG 1078
65|Sequence|321|330|PQEGGLMPCD
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 PQEGGLMP 8
PQEGG P
Sbjct: 2419 PQEGGAAP 2426
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 PQEGGLMPC 9
PQ G +PC
Sbjct: 469 PQHGKELPC 477
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 PQEGGLMPC 9
PQ G +PC
Sbjct: 469 PQHGKELPC 477
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 PQEGGLMPC 9
PQ G +PC
Sbjct: 469 PQHGKELPC 477
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 3 EGGLMPC 9
EG L PC
Sbjct: 250 EGALSPC 256
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 3 EGGLMPC 9
EG L PC
Sbjct: 250 EGALSPC 256
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 5 GLMPCD 10
G+MPC+
Sbjct: 449 GVMPCN 454
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 5 GLMPCD 10
G+MPC+
Sbjct: 449 GVMPCN 454
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 2 QEGGLMPCD 10
QEGG P D
Sbjct: 189 QEGGPKPTD 197
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 PQEGGLMPC 9
PQ G +PC
Sbjct: 470 PQHGKELPC 478
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 PQEGGLMPC 9
PQ G +PC
Sbjct: 470 PQHGKELPC 478
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 PQEGGLMPC 9
PQ G +PC
Sbjct: 470 PQHGKELPC 478
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 QEGGLMPCD 10
+EGGLM D
Sbjct: 3047 KEGGLMYAD 3055
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 4 GGLMPCD 10
GLM CD
Sbjct: 1359 AGLMACD 1365
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 3 EGGLMPC 9
E G++PC
Sbjct: 239 ENGIVPC 245
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 PQE-GGLMPC 9
PQ GG+ PC
Sbjct: 1084 PQRVGGVWPC 1093
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 PQE-GGLMPC 9
PQ GG+ PC
Sbjct: 1084 PQRVGGVWPC 1093
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 PQE-GGLMPC 9
PQ GG+ PC
Sbjct: 1084 PQRVGGVWPC 1093
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 PQEGGLMPC 9
PQ G +PC
Sbjct: 470 PQHGKELPC 478
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 EGGLMPC 9
EG L PC
Sbjct: 249 EGALPPC 255
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 PQEGGL 6
PQ GGL
Sbjct: 923 PQHGGL 928
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 5 GLMPC 9
GL+PC
Sbjct: 681 GLLPC 685
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 5 GLMPC 9
GL+PC
Sbjct: 681 GLLPC 685
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 5 GLMPC 9
G+MPC
Sbjct: 826 GMMPC 830
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 5 GLMPC 9
G+MPC
Sbjct: 826 GMMPC 830
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 5 GLMPCD 10
GLM CD
Sbjct: 1255 GLMGCD 1260
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 5 GLMPC 9
GL+PC
Sbjct: 826 GLLPC 830
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 1 PQEGGLMP 8
PQ G++P
Sbjct: 199 PQSSGILP 206
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 5 GLMPC 9
GL+PC
Sbjct: 826 GLLPC 830
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 5 GLMPC 9
GL+PC
Sbjct: 826 GLLPC 830
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 5 GLMPC 9
GL+PC
Sbjct: 826 GLLPC 830
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 PQEGGLMPC 9
P GL+PC
Sbjct: 229 PWHTGLLPC 237
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 4 GGLMPCD 10
GG++ CD
Sbjct: 980 GGILRCD 986
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 1 PQEGGLMP 8
PQ G L+P
Sbjct: 233 PQSGTLLP 240
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 5 GLMPC 9
GL+PC
Sbjct: 831 GLLPC 835
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 PQEGGLMPC 9
P GL+PC
Sbjct: 229 PWHTGLLPC 237
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 5 GLMPC 9
GL+PC
Sbjct: 831 GLLPC 835
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 1 PQEGGLMPCD 10
P +GG P D
Sbjct: 249 PDDGGSTPVD 258
66|Sequence|326|335|LMPCDAALVA
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 4 CDAALV 9
CDAALV
Sbjct: 258 CDAALV 263
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 4 CDAALV 9
CDAALV
Sbjct: 258 CDAALV 263
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 4 CDAALV 9
CDAALV
Sbjct: 258 CDAALV 263
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 4 CDAALV 9
CDAALV
Sbjct: 258 CDAALV 263
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 1 LMPCDA 6
+MPC+A
Sbjct: 450 VMPCNA 455
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 1 LMPCDA 6
+MPC+A
Sbjct: 450 VMPCNA 455
67|Sequence|331|340|AALVAGECMV
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 1 AALVAGECMV 10
A L+ GEC++
Sbjct: 190 ATLLVGECVL 199
>sp|E1A_ADE12|EARLY E1A protein|Human adenovirus A serotype 12
Query: 4 VAGECM 9
+ GECM
Sbjct: 92 IGGECM 97
>sp|VIF_HV1SC|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 AALVAGEC 8
ALV+G C
Sbjct: 43 GALVSGRC 50
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 3 LVAGECM 9
LVAG C+
Sbjct: 786 LVAGVCL 792
68|Sequence|336|345|GECMVNESSL
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 CMVNESSL 10
C+VN+S L
Sbjct: 600 CVVNQSYL 607
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 CMVNESSL 10
C+VN+S L
Sbjct: 600 CVVNQSYL 607
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 3 CMVNESSL 10
C++N SSL
Sbjct: 214 CLLNGSSL 221
>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 3 CMVNESSL 10
C++N SSL
Sbjct: 214 CLLNGSSL 221
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 CMVNESSL 10
C+VN+S L
Sbjct: 600 CVVNQSYL 607
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 2 ECMVNES 8
EC VNE+
Sbjct: 119 ECSVNEA 125
>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)
Query: 3 CMVNESSL 10
C VNE+++
Sbjct: 304 CAVNEAAM 311
>sp|GI_HHV23|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain 333)
Query: 3 CMVNESSL 10
C VNE+++
Sbjct: 304 CAVNEAAM 311
>sp|GI_HHV11|ENVELOPE glycoprotein I|Human herpesvirus 1 (strain 17)
Query: 3 CMVNESSL 10
C VNE+++
Sbjct: 321 CAVNEAAM 328
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 GECMVN 6
G+C++N
Sbjct: 1153 GDCLIN 1158
>sp|M2_I67A2|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 ECMVNESS 9
EC N+SS
Sbjct: 16 ECRCNDSS 23
69|Sequence|341|350|NESSLTGESI
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 SSLTGESI 10
SS+TGES+
Sbjct: 1111 SSITGESL 1118
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 NESSLTGESI 10
+E+ +TGES+
Sbjct: 1425 DEAEVTGESV 1434
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 1 NESSLTGESI 10
N+S LTG +I
Sbjct: 343 NDSWLTGNAI 352
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 NESSLTGESI 10
N+S LTG +I
Sbjct: 343 NDSWLTGNAI 352
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 NESSLTGES 9
NE+ +TG S
Sbjct: 1430 NEAEITGTS 1438
70|Sequence|346|355|TGESIPVLKT
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 1 TGESIPVLK 9
TG+S+P ++
Sbjct: 12 TGQSVPTME 20
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 1 TGESIPVLK 9
TG+S+P ++
Sbjct: 12 TGQSVPTME 20
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 1 TGESIPVLK 9
TG+S+P ++
Sbjct: 12 TGQSVPAME 20
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 3 ESIPVLKT 10
+SIP LKT
Sbjct: 512 DSIPGLKT 519
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 ESIPVLKT 10
+SIP LKT
Sbjct: 512 DSIPGLKT 519
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 ESIPVLKT 10
+SIP LKT
Sbjct: 512 DSIPGLKT 519
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 ESIPVLKT 10
+ +PVLKT
Sbjct: 692 KDMPVLKT 699
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 ESIPVLKT 10
+ +PVLKT
Sbjct: 692 KDMPVLKT 699
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 ESIPVLKT 10
+ +PVLKT
Sbjct: 692 KDMPVLKT 699
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 ESIPVLKT 10
+ +PVLKT
Sbjct: 692 KDMPVLKT 699
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 ESIPVLKT 10
+ +PVLKT
Sbjct: 692 KDMPVLKT 699
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 ESIPVLKT 10
+ +PVLKT
Sbjct: 692 KDMPVLKT 699
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 TGESIPVL 8
TGE+IP L
Sbjct: 873 TGENIPGL 880
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 IPVLKT 10
+PVLKT
Sbjct: 1018 VPVLKT 1023
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 IPVLKT 10
+PVLKT
Sbjct: 1018 VPVLKT 1023
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 TGESIP 6
TGES+P
Sbjct: 1114 TGESLP 1119
71|Sequence|351|360|PVLKTALPEG
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 3 LKTALPEG 10
LKTALP+G
Sbjct: 113 LKTALPDG 120
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 1 PVLKTALP 8
P++KT+LP
Sbjct: 730 PIVKTSLP 737
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PVLKTALP 8
P++KT+LP
Sbjct: 730 PIVKTSLP 737
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PVLKTALP 8
P++KT+LP
Sbjct: 731 PIVKTSLP 738
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PVLKTALP 8
P++KT+LP
Sbjct: 731 PIVKTSLP 738
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 1 PVLKTALP 8
P++KT+LP
Sbjct: 731 PIVKTSLP 738
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 4 KTALPEG 10
KT++PEG
Sbjct: 1873 KTSIPEG 1879
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 4 KTALPEG 10
KT++PEG
Sbjct: 1872 KTSVPEG 1878
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 PVLKTALPEG 10
PVL+TA +G
Sbjct: 1540 PVLRTATVQG 1549
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 PVLKTALPEG 10
PVL+TA +G
Sbjct: 1540 PVLRTATVQG 1549
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 PVLKTALPEG 10
PVL+TA +G
Sbjct: 1540 PVLRTATVQG 1549
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 PVLKTALPEG 10
P+L+TA +G
Sbjct: 1540 PILRTATVQG 1549
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 4 KTALPE 9
KTALPE
Sbjct: 116 KTALPE 121
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PVLKTA 6
PVLKTA
Sbjct: 1019 PVLKTA 1024
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PVLKTA 6
PVLKTA
Sbjct: 1019 PVLKTA 1024
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PVLKTA 6
PVLKTA
Sbjct: 1019 PVLKTA 1024
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PVLKTA 6
PVLKTA
Sbjct: 1019 PVLKTA 1024
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 VLKTALPEG 10
VL TA+P G
Sbjct: 1346 VLATAIPPG 1354
72|Sequence|356|365|ALPEGLGPYC
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 3 PEGLGPYC 10
PEG PYC
Sbjct: 570 PEGQCPYC 577
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 PEGLGPYC 10
PEG PYC
Sbjct: 570 PEGQCPYC 577
>sp|NS1_INBYA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 4 EGLGPYC 10
EG PYC
Sbjct: 98 EGFEPYC 104
>sp|NS1_INBVJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Victoria/1987)
Query: 4 EGLGPYC 10
EG PYC
Sbjct: 98 EGFEPYC 104
>sp|NS1_INBSJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/1964)
Query: 4 EGLGPYC 10
EG PYC
Sbjct: 98 EGFEPYC 104
>sp|NS1_INBSI|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 4 EGLGPYC 10
EG PYC
Sbjct: 98 EGFEPYC 104
>sp|NS1_INBPA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/PA/1979)
Query: 4 EGLGPYC 10
EG PYC
Sbjct: 98 EGFEPYC 104
>sp|NS1_INBMD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Maryland/1959)
Query: 4 EGLGPYC 10
EG PYC
Sbjct: 98 EGFEPYC 104
>sp|NS1_INBLE|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Lee/1940)
Query: 4 EGLGPYC 10
EG PYC
Sbjct: 98 EGFEPYC 104
>sp|NS1_INBHT|NON-STRUCTURAL protein 1|Influenza B virus (strain B/HT/1984)
Query: 4 EGLGPYC 10
EG PYC
Sbjct: 98 EGFEPYC 104
>sp|NS1_INBHK|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Hong
Query: 4 EGLGPYC 10
EG PYC
Sbjct: 98 EGFEPYC 104
>sp|NS1_INBBA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/BA/1978)
Query: 4 EGLGPYC 10
EG PYC
Sbjct: 98 EGFEPYC 104
>sp|NS1_INBAD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 4 EGLGPYC 10
EG PYC
Sbjct: 98 EGFEPYC 104
>sp|NS1_INBAC|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 4 EGLGPYC 10
EG PYC
Sbjct: 98 EGFEPYC 104
>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)
Query: 4 EGLGPYC 10
EG PYC
Sbjct: 98 EGFEPYC 104
>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 ALPEGLGPY 9
A+P+ LGP+
Sbjct: 25 AIPDKLGPW 33
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 PEGLGPYC 10
PE + PYC
Sbjct: 481 PEDMRPYC 488
>sp|PHOSP_VSIVC|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 1 ALPEGL 6
ALPEGL
Sbjct: 125 ALPEGL 130
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 ALPEGLGP 8
LP+ LGP
Sbjct: 310 GLPDSLGP 317
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 PEGLGPYC 10
PE + PYC
Sbjct: 481 PEDMRPYC 488
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 ALPEGLG 7
A+P+GLG
Sbjct: 575 AMPQGLG 581
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LPEGLGP 8
LP+GL P
Sbjct: 561 LPDGLAP 567
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LPEGLGP 8
LP+GL P
Sbjct: 561 LPDGLAP 567
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 3 PEGLGPYC 10
PE + PYC
Sbjct: 481 PEDMRPYC 488
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 PEGLGPYC 10
P G PYC
Sbjct: 571 PHGQCPYC 578
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 3 PEGLGPYC 10
PE + PYC
Sbjct: 233 PELVLPYC 240
>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49
Query: 2 LPEGLGP 8
LPE +GP
Sbjct: 92 LPEAIGP 98
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 ALPEGLGPY 9
ALP G PY
Sbjct: 388 ALPVGQWPY 396
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 ALPEGL 6
ALPEGL
Sbjct: 885 ALPEGL 890
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 5 GLGPY 9
GLGPY
Sbjct: 160 GLGPY 164
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 5 GLGPY 9
GLGPY
Sbjct: 158 GLGPY 162
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 2 LPEGLGPY 9
+PE +GP+
Sbjct: 26 IPEKIGPW 33
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 5 GLGPY 9
GLGPY
Sbjct: 158 GLGPY 162
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 5 GLGPY 9
GLGPY
Sbjct: 158 GLGPY 162
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 2 LPEGLGPY 9
+P+ LGP+
Sbjct: 26 IPDKLGPW 33
>sp|TRX2_EBVB9|TRIPLEX capsid protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ALPEGLGP 8
ALPE GP
Sbjct: 189 ALPEVPGP 196
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 2 LPEGLGPY 9
+P+ LGP+
Sbjct: 26 IPDKLGPW 33
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 2 LPEGLGPY 9
+P+ LGP+
Sbjct: 26 IPDKLGPW 33
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 LPEGLGPY 9
+P+ LGP+
Sbjct: 26 IPDKLGPW 33
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 2 LPEGLGPY 9
+P+ LGP+
Sbjct: 26 IPDKLGPW 33
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 2 LPEGLGPY 9
+P+ LGP+
Sbjct: 26 IPDKLGPW 33
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 2 LPEGLGPY 9
+P+ LGP+
Sbjct: 26 IPDKLGPW 33
>sp|VP1_POVBA|MAJOR capsid protein VP1|BK polyomavirus (strain AS) (BKPyV)
Query: 4 EGLGPYC 10
+G+GP C
Sbjct: 249 QGVGPLC 255
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 2 LPEGLGPY 9
+P+ LGP+
Sbjct: 26 IPDTLGPW 33
>sp|VP1_POVBK|MAJOR capsid protein VP1|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 4 EGLGPYC 10
+G+GP C
Sbjct: 249 QGVGPLC 255
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 2 LPEGLGPY 9
+P+ LGP+
Sbjct: 26 IPDKLGPW 33
>sp|VL2_HPV47|MINOR capsid protein L2|Human papillomavirus 47
Query: 2 LPEGLGP 8
+PE +GP
Sbjct: 92 VPEAIGP 98
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 GLGPYC 10
GLG YC
Sbjct: 139 GLGGYC 144
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 2 LPEGLGP 8
+PE +GP
Sbjct: 92 VPEAIGP 98
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 2 LPEGLGPY 9
+P+ LGP+
Sbjct: 26 IPDKLGPW 33
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 2 LPEGLGPY 9
+P+ LGP+
Sbjct: 26 IPDKLGPW 33
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 PEGLGPY 9
P GL PY
Sbjct: 1587 PHGLTPY 1593
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 PEGLGPY 9
P GL PY
Sbjct: 1587 PHGLTPY 1593
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 LPEGLG 7
+P+GLG
Sbjct: 576 MPQGLG 581
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 2 LPEGLGPYC 10
+P+G YC
Sbjct: 249 VPDGCAMYC 257
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 PEGLGPY 9
P GL PY
Sbjct: 1587 PHGLTPY 1593
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 2 LPEGLGPYC 10
+P+G YC
Sbjct: 249 VPDGCAMYC 257
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 2 LPEGLGPYC 10
+P+G YC
Sbjct: 249 VPDGCAMYC 257
>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65
Query: 4 EGLGP 8
EGLGP
Sbjct: 92 EGLGP 96
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 LPEGLGPY 9
+P+ LGP+
Sbjct: 26 IPDELGPW 33
>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)
Query: 5 GLGPYC 10
G+GP C
Sbjct: 242 GVGPLC 247
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 2 LPEGLGP 8
+PE +GP
Sbjct: 92 VPEAVGP 98
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 2 LPEGLGPYC 10
+P+G YC
Sbjct: 249 VPDGCAMYC 257
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ALPEGLGPY 9
A+PEGL Y
Sbjct: 95 AVPEGLYYY 103
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 2 LPEGLGPYC 10
+P+G YC
Sbjct: 249 VPDGCAMYC 257
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 2 LPEGLGPY 9
+P+ LGP+
Sbjct: 26 IPDELGPW 33
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 2 LPEGLGP 8
+PE +GP
Sbjct: 92 VPESVGP 98
73|Sequence|361|370|LGPYCAETHR
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 LGPYCAETHR 10
LGP+C + R
Sbjct: 895 LGPHCGSSSR 904
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 1 LGPYCAETHR 10
LG C E HR
Sbjct: 187 LGDVCDEIHR 196
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LGPYCAETHR 10
LG C E HR
Sbjct: 187 LGDVCDEIHR 196
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 1 LGPYCAETHR 10
LG C E HR
Sbjct: 187 LGDVCDEIHR 196
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LGPYCAETH 9
LGPY E H
Sbjct: 796 LGPYVDEGH 804
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LGPYCAETH 9
LGPY E H
Sbjct: 796 LGPYVDEGH 804
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LGPYCAETH 9
LGPY E H
Sbjct: 796 LGPYVDEGH 804
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 2 GPYCAETHR 10
GP+ AET R
Sbjct: 300 GPFDAETRR 308
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 2 GPYCAETHR 10
GP+ AET R
Sbjct: 301 GPFDAETRR 309
>sp|ORF4B_MERS1|NON-STRUCTURAL protein ORF4b|Middle East respiratory syndrome-related coronavirus
Query: 4 YCAETHR 10
YCA HR
Sbjct: 143 YCANIHR 149
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 2 GPYC 5
GPYC
Sbjct: 497 GPYC 500
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 2 GPYC 5
GPYC
Sbjct: 506 GPYC 509
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GPYC 5
GPYC
Sbjct: 506 GPYC 509
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 4 YCAETH 9
YC E+H
Sbjct: 415 YCIESH 420
>sp|UL74A_HCMVM|UNCHARACTERIZED protein UL74A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GPYCAETH 9
GP C +TH
Sbjct: 59 GPICNQTH 66
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 YCAETH 9
YC E H
Sbjct: 3577 YCVEMH 3582
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 YCAETH 9
YC E H
Sbjct: 3577 YCVEMH 3582
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 GPYCAET 8
GP C++T
Sbjct: 1435 GPVCSKT 1441
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 2 GPYCAET 8
GP C++T
Sbjct: 1437 GPVCSKT 1443
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 GPYCAET 8
GP C++T
Sbjct: 1438 GPVCSKT 1444
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 GPYCAET 8
GP C++T
Sbjct: 1437 GPVCSKT 1443
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 GPYCAET 8
GP C++T
Sbjct: 1437 GPVCSKT 1443
>sp|SPI1_VARV|SERINE proteinase inhibitor 1|Variola virus
Query: 3 PYCA 6
PYCA
Sbjct: 84 PYCA 87
>sp|SPI1_VAR67|SERINE proteinase inhibitor 1|Variola virus (isolate
Query: 3 PYCA 6
PYCA
Sbjct: 84 PYCA 87
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 2 GPYCAET 8
GP C +T
Sbjct: 337 GPLCVDT 343
>sp|ICP47_HHV2H|ICP47 protein|Human herpesvirus 2 (strain HG52)
Query: 2 GPYCAETHR 10
G CAE H+
Sbjct: 23 GDVCAEIHK 31
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LGPYCAET 8
+G YC +T
Sbjct: 435 IGHYCCDT 442
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 1 LGPYCAET 8
+G YC +T
Sbjct: 446 IGHYCCDT 453
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 4 YCAET 8
YC+ET
Sbjct: 2229 YCSET 2233
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 LGPYCAETHR 10
LGP + HR
Sbjct: 2115 LGPQSSTRHR 2124
>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus
Query: 2 GPYCAETH 9
G YC TH
Sbjct: 274 GLYCYFTH 281
>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate
Query: 2 GPYCAETH 9
G YC TH
Sbjct: 274 GLYCYFTH 281
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 2 GPYCAETH 9
G YC TH
Sbjct: 274 GLYCYFTH 281
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GPYCAETH 9
G YC TH
Sbjct: 274 GLYCYFTH 281
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 GPYCAETH 9
G YC TH
Sbjct: 274 GLYCYFTH 281
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 2 GPYCAETH 9
G YC TH
Sbjct: 274 GLYCYFTH 281
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 2 GPYCAETH 9
G YC TH
Sbjct: 274 GLYCYFTH 281
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 2 GPYCAETH 9
G YC TH
Sbjct: 274 GLYCYFTH 281
74|Sequence|366|375|AETHRRHTLF
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 AETHRRHTLF 10
AETH HT
Sbjct: 36 AETHSLHTFL 45
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 2 ETHRRHTLF 10
E H+RH L
Sbjct: 51 EIHKRHILL 59
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 ETHRRHTLF 10
+TH+ HT++
Sbjct: 424 KTHKNHTMY 432
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 1 AETHRRHTLF 10
AET H LF
Sbjct: 62 AETETAHALF 71
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 2 ETHRRHTLF 10
E H+++T+F
Sbjct: 517 EKHQKYTVF 525
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 2 ETHRRHTLF 10
E H+++T+F
Sbjct: 517 EKHQKYTVF 525
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 4 HRRHTL 9
HR HTL
Sbjct: 182 HRTHTL 187
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 ETHRRHTLF 10
E H+++T+F
Sbjct: 517 EKHQKYTVF 525
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 ETHRRH 7
++HRRH
Sbjct: 1415 QSHRRH 1420
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 ETHRRH 7
++HRRH
Sbjct: 1415 QSHRRH 1420
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 2 ETHRRHTL 9
E HR+H +
Sbjct: 193 EIHRKHII 200
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 ETHRRHTL 9
E HR+H +
Sbjct: 193 EIHRKHII 200
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 2 ETHRRHTL 9
E HR+H +
Sbjct: 193 EIHRKHII 200
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 4 HRRHTL 9
HR HTL
Sbjct: 182 HRTHTL 187
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 ETHRRH 7
++HRRH
Sbjct: 1415 QSHRRH 1420
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 5 RRHTLF 10
+RHTLF
Sbjct: 541 KRHTLF 546
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 2 ETHRRHTLF 10
+++R HTLF
Sbjct: 1029 DSNRLHTLF 1037
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 THRRHT 8
TH RHT
Sbjct: 1066 THLRHT 1071
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 3 THRRHT 8
TH RHT
Sbjct: 1044 THLRHT 1049
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 3 THRRHT 8
TH RHT
Sbjct: 1039 THLRHT 1044
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 4 HRRHTL 9
HR HTL
Sbjct: 177 HRTHTL 182
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 AETHR 5
AETHR
Sbjct: 4631 AETHR 4635
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 AETHRRHTL 9
++TH R+T+
Sbjct: 505 SQTHYRYTV 513
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AETHRRHTLF 10
+++R HT+F
Sbjct: 1061 CDSNRMHTIF 1070
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 AETHRRHT 8
+ H+RHT
Sbjct: 494 SSAHQRHT 501
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 4 HRRHTLF 10
HR H LF
Sbjct: 75 HRCHPLF 81
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 2 ETHRRHTLF 10
+ +R HTLF
Sbjct: 1036 DNNRLHTLF 1044
75|Sequence|371|380|RHTLFCGTLI
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 HTLFCGTLI 10
H +FCGT+I
Sbjct: 396 HAIFCGTII 404
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 HTLFCGTLI 10
H +FCGT+I
Sbjct: 396 HAVFCGTII 404
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 RHTLFCGTLI 10
R L+CG+LI
Sbjct: 3364 REDLWCGSLI 3373
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 RHTLFCGTLI 10
R L+CG+LI
Sbjct: 3364 REDLWCGSLI 3373
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 RHTLFCGTLI 10
R L+CG+LI
Sbjct: 3360 REDLWCGSLI 3369
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RHTLFCGTLI 10
R L+CG+LI
Sbjct: 3330 REDLWCGSLI 3339
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RHTLFCGTLI 10
R L+CG+LI
Sbjct: 3330 REDLWCGSLI 3339
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RHTLFCGTLI 10
R L+CG+LI
Sbjct: 3330 REDLWCGSLI 3339
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RHTLFCGTLI 10
R L+CG+LI
Sbjct: 3330 REDLWCGSLI 3339
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RHTLFCGTLI 10
R L+CG+LI
Sbjct: 3330 REDLWCGSLI 3339
>sp|UL136_HCMVT|PROTEIN UL136|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 HTLFCG 7
H LFCG
Sbjct: 102 HDLFCG 107
>sp|UL136_HCMVM|PROTEIN UL136|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HTLFCG 7
H LFCG
Sbjct: 102 HDLFCG 107
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 RHTLFCGTLI 10
R ++CG+LI
Sbjct: 3375 REDIWCGSLI 3384
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 RHTLFCGTLI 10
R ++CG+LI
Sbjct: 3372 REDIWCGSLI 3381
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 RHTLFCGTLI 10
R ++CG+LI
Sbjct: 3376 REDIWCGSLI 3385
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 RHTLFCGTLI 10
R ++CG+LI
Sbjct: 3371 REDIWCGSLI 3380
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 RHTLFCGTLI 10
R ++CG+LI
Sbjct: 3376 REDIWCGSLI 3385
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 RHTLFCGTLI 10
R ++CG+LI
Sbjct: 3375 REDIWCGSLI 3384
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 RHTLFCGTLI 10
R ++CG+LI
Sbjct: 3374 REDIWCGSLI 3383
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 RHTLFCGTLI 10
R ++CG+LI
Sbjct: 3374 REDIWCGSLI 3383
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 RHTLFCGTLI 10
R ++CG+LI
Sbjct: 3374 REDIWCGSLI 3383
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 RHTLFCGTLI 10
R ++CG+LI
Sbjct: 3374 REDIWCGSLI 3383
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 3 TLFCGTL 9
TLFCG L
Sbjct: 343 TLFCGGL 349
>sp|UL124_HCMVM|UNCHARACTERIZED protein UL124|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 TLFCGTLI 10
T CGTL+
Sbjct: 82 TALCGTLV 89
>sp|UL124_HCMVA|UNCHARACTERIZED protein UL124|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 TLFCGTLI 10
T CGTL+
Sbjct: 84 TALCGTLV 91
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1393 RHLIFC 1398
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1393 RHLIFC 1398
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1393 RHLIFC 1398
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1393 RHLIFC 1398
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1393 RHLIFC 1398
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1394 RHLIFC 1399
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1393 RHLIFC 1398
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1395 RHLIFC 1400
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1390 RHLIFC 1395
Query: 2 HTLFCG 7
HTL CG
Sbjct: 124 HTLTCG 129
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1389 RHLIFC 1394
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1389 RHLIFC 1394
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1395 RHLIFC 1400
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1390 RHLIFC 1395
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1391 RHLIFC 1396
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1387 RHLIFC 1392
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1389 RHLIFC 1394
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1390 RHLIFC 1395
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1393 RHLIFC 1398
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1389 RHLIFC 1394
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1389 RHLIFC 1394
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1389 RHLIFC 1394
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1389 RHLIFC 1394
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1393 RHLIFC 1398
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1389 RHLIFC 1394
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1389 RHLIFC 1394
>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)
Query: 1 RHTLFC 6
RH +FC
Sbjct: 328 RHHIFC 333
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1389 RHLIFC 1394
>sp|FUS_MUMPM|FUSION glycoprotein F0|Mumps virus genotype B (strain
Query: 1 RHTLFC 6
RH +FC
Sbjct: 328 RHHIFC 333
>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)
Query: 1 RHTLFC 6
RH +FC
Sbjct: 328 RHHIFC 333
>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)
Query: 1 RHTLFC 6
RH +FC
Sbjct: 328 RHHIFC 333
>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)
Query: 1 RHTLFC 6
RH +FC
Sbjct: 328 RHHIFC 333
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1394 RHLIFC 1399
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1389 RHLIFC 1394
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1389 RHLIFC 1394
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1394 RHLIFC 1399
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1397 RHLVFC 1402
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RHTLFC 6
RH +FC
Sbjct: 1389 RHLIFC 1394
>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain
Query: 1 RHTLFC 6
RH +FC
Sbjct: 328 RHHIFC 333
>sp|VE7_HPV18|PROTEIN E7|Human papillomavirus type 18
Query: 1 RHTLFC 6
RHT+ C
Sbjct: 58 RHTMLC 63
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 HTLFC 6
H+LFC
Sbjct: 5662 HSLFC 5666
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 LFCGTLI 10
LF GTLI
Sbjct: 19 LFLGTLI 25
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 HTLFC 6
H+LFC
Sbjct: 5637 HSLFC 5641
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 HTLFCGTLI 10
H LFC I
Sbjct: 314 HVLFCSDQI 322
>sp|SPI1_MONPV|SERINE proteinase inhibitor 1|Monkeypox virus (MPXV)
Query: 2 HTLFCG 7
HTLF G
Sbjct: 346 HTLFIG 351
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 2 HTLFC 6
H LFC
Sbjct: 314 HVLFC 318
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 HTLFC 6
H LFC
Sbjct: 314 HVLFC 318
>sp|UL24_HHV2H|PROTEIN UL24|Human herpesvirus 2 (strain HG52)
Query: 3 TLFCGTLI 10
T CGTL+
Sbjct: 50 TRICGTLL 57
76|Sequence|376|385|CGTLILQARA
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 GTLILQA 8
GTLILQA
Sbjct: 1268 GTLILQA 1274
77|Sequence|381|390|LQARAYVGPH
>sp|V073_ORFSA|PROTEIN ORFV073|Orf virus (strain Goat/Texas/SA00/2000) (OV-SA00)
Query: 3 ARAYVGPH 10
ARA +GPH
Sbjct: 16 ARAALGPH 23
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 5 AYVGPH 10
AY+GP+
Sbjct: 1241 AYIGPY 1246
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 5 AYVGPH 10
AY+GP+
Sbjct: 1264 AYIGPY 1269
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 5 AYVGPH 10
AY+GP+
Sbjct: 1264 AYIGPY 1269
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 LQARAYVG 8
LQA AY+G
Sbjct: 1272 LQAIAYLG 1279
78|Sequence|386|395|YVGPHVLAVV
>sp|UL92_EBVB9|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain B95-8)
Query: 1 YVGPH 5
Y+GPH
Sbjct: 78 YMGPH 82
>sp|UL92_EBVA8|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain AG876)
Query: 1 YVGPH 5
Y+GPH
Sbjct: 78 YMGPH 82
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 YVGPHVLA 8
++GP++LA
Sbjct: 508 HLGPNILA 515
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 2 VGPHVLAVV 10
V PH+L V+
Sbjct: 636 VNPHLLRVL 644
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 2 VGPHVLAVV 10
V PH+L V+
Sbjct: 636 VNPHLLRVL 644
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VGPHVLAVV 10
V PH+L V+
Sbjct: 636 VNPHLLRVL 644
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 VGPHVLAVV 10
V PH+L V+
Sbjct: 636 VNPHLLRVL 644
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 2 VGPHVLAVV 10
V PH+L V+
Sbjct: 636 VNPHLLRVL 644
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 3 GPHVLAV 9
GPH L +
Sbjct: 58 GPHTLPI 64
>sp|TRX1_HCMVM|TRIPLEX capsid protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VGPHVL 7
+GPH+L
Sbjct: 120 LGPHLL 125
>sp|TRX1_HCMVA|TRIPLEX capsid protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VGPHVL 7
+GPH+L
Sbjct: 120 LGPHLL 125
79|Sequence|391|400|VLAVVTRTGF
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 VVTRTG 9
+VTRTG
Sbjct: 2085 IVTRTG 2090
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 LAVVTRTG 9
LA++TR G
Sbjct: 155 LAILTRRG 162
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 LAVVTRTG 9
LA++TR G
Sbjct: 155 LAILTRRG 162
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 LAVVTRTG 9
LA++TR G
Sbjct: 156 LAILTRRG 163
80|Sequence|396|405|TRTGFCTAKG
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 RTGFCTAKG 10
R GF T KG
Sbjct: 1535 RKGFSTTKG 1543
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 RTGFCTAKG 10
R GF T KG
Sbjct: 1535 RKGFSTTKG 1543
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 RTGFC 6
RTGFC
Sbjct: 4 RTGFC 8
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain
Query: 2 RTGFC 6
RTGFC
Sbjct: 4 RTGFC 8
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 2 RTGFCTA 8
+TG+C A
Sbjct: 696 KTGYCAA 702
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 RTGFC 6
R+GFC
Sbjct: 172 RSGFC 176
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 RTGFC 6
R+GFC
Sbjct: 172 RSGFC 176
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 RTGFC 6
R+GFC
Sbjct: 172 RSGFC 176
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 RTGFC 6
R+GFC
Sbjct: 172 RSGFC 176
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 RTGFC 6
R+GFC
Sbjct: 172 RSGFC 176
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 TRTGFCTAK 9
TRT F TA+
Sbjct: 2436 TRTPFATAE 2444
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 RTGFC 6
R+GFC
Sbjct: 1113 RSGFC 1117
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 4 GFCTAKG 10
GFCT G
Sbjct: 605 GFCTDCG 611
81|Sequence|401|410|CTAKGGLVSS
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 AKGGLVSS 10
A+GGLV S
Sbjct: 1117 AQGGLVRS 1124
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 AKGGLVSS 10
A+GGLV S
Sbjct: 1117 AQGGLVRS 1124
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 CTAKGGLVSS 10
CTA+G +SS
Sbjct: 360 CTAEGIAISS 369
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 3 AKGGLVS 9
A GGLVS
Sbjct: 176 ASGGLVS 182
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 4 KGGLVS 9
KGG+VS
Sbjct: 99 KGGIVS 104
82|Sequence|406|415|GLVSSILHPR
>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41
Query: 3 VSSILHP 9
++SILHP
Sbjct: 384 LASILHP 390
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 GLVSSILHPR 10
G+V +HPR
Sbjct: 1640 GVVPPAIHPR 1649
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 GLVSSILHPR 10
G+V +HPR
Sbjct: 1640 GVVPPAIHPR 1649
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 GLVSSILH 8
GLV+S LH
Sbjct: 1460 GLVASALH 1467
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 GLVSSILH 8
GLV+S LH
Sbjct: 1460 GLVASALH 1467
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 GLVSSILHPR 10
G+V +HPR
Sbjct: 1639 GVVPPAVHPR 1648
>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 SILHP 9
SILHP
Sbjct: 414 SILHP 418
>sp|VPK2_VACCT|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Tian Tan)
Query: 5 SILHP 9
SILHP
Sbjct: 414 SILHP 418
>sp|VPK2_VACCP|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain L-IVP) (VACV)
Query: 5 SILHP 9
SILHP
Sbjct: 380 SILHP 384
>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 SILHP 9
SILHP
Sbjct: 414 SILHP 418
>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)
Query: 5 SILHP 9
SILHP
Sbjct: 414 SILHP 418
>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)
Query: 5 SILHP 9
SILHP
Sbjct: 414 SILHP 418
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 5 SILHP 9
SILHP
Sbjct: 251 SILHP 255
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 5 SILHP 9
SILHP
Sbjct: 251 SILHP 255
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 5 SILHP 9
SILHP
Sbjct: 251 SILHP 255
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 5 SILHP 9
SILHP
Sbjct: 251 SILHP 255
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 5 SILHP 9
SILHP
Sbjct: 242 SILHP 246
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 5 SILHP 9
SILHP
Sbjct: 257 SILHP 261
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 5 SILHP 9
SILHP
Sbjct: 242 SILHP 246
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 5 SILHP 9
SILHP
Sbjct: 253 SILHP 257
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 5 SILHP 9
SILHP
Sbjct: 242 SILHP 246
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 5 SILHP 9
SILHP
Sbjct: 243 SILHP 247
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 5 SILHP 9
SILHP
Sbjct: 243 SILHP 247
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 5 SILHP 9
SILHP
Sbjct: 250 SILHP 254
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 5 SILHP 9
SILHP
Sbjct: 251 SILHP 255
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 5 SILHP 9
SILHP
Sbjct: 243 SILHP 247
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 1 GLVSSILHPR 10
GL+ ILH +
Sbjct: 174 GLIYHILHQK 183
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 1 GLVSSILHPR 10
GL+ ILH +
Sbjct: 458 GLIYHILHQK 467
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GLVSSILHPR 10
GL+ ILH +
Sbjct: 458 GLIYHILHQK 467
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 1 GLVSSIL 7
GL+SSI+
Sbjct: 435 GLISSII 441
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 2 LVSSILH 8
L SSILH
Sbjct: 35 LCSSILH 41
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 2 LVSSILH 8
L SSILH
Sbjct: 35 LCSSILH 41
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LVSSILHPR 10
+V S+L+PR
Sbjct: 125 IVLSVLNPR 133
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LVSSILHPR 10
+V S+L+PR
Sbjct: 125 IVLSVLNPR 133
83|Sequence|411|420|ILHPRPINFK
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 1 ILHPRPINF 9
+LHP P NF
Sbjct: 789 VLHPVPQNF 797
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 1 ILHPRPINF 9
+LHP P NF
Sbjct: 789 VLHPVPQNF 797
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ILHPRPINF 9
+L PRPI++
Sbjct: 1152 LLSPRPISY 1160
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 ILHPRPINF 9
+L PRPI++
Sbjct: 1152 LLSPRPISY 1160
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 ILHPRPINF 9
+L PRPI++
Sbjct: 1152 LLSPRPISY 1160
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ILHPRPINF 9
+L PRPI++
Sbjct: 1152 LLSPRPISY 1160
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ILHPRPINF 9
+L PRPI++
Sbjct: 1152 LLSPRPISY 1160
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 ILHPRPINF 9
+L PRPI++
Sbjct: 1152 LLSPRPISY 1160
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 ILHPRPINF 9
+L PRPI++
Sbjct: 1152 LLSPRPISY 1160
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 ILHPRPINF 9
+L PRPI++
Sbjct: 1153 LLSPRPISY 1161
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 ILHPRPINF 9
+L PRPI++
Sbjct: 1153 LLSPRPISY 1161
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ILHPRPINF 9
+L PRP+++
Sbjct: 1152 LLSPRPVSY 1160
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ILHPRPINF 9
+L PRP+++
Sbjct: 1152 LLSPRPVSY 1160
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ILHPRPINF 9
+L PRP+++
Sbjct: 1152 LLSPRPVSY 1160
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ILHPRPINF 9
+L PRP+++
Sbjct: 1152 LLSPRPVSY 1160
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ILHPRPINF 9
+L PRP+++
Sbjct: 1152 LLSPRPVSY 1160
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 1 ILHPRPI 7
+LHP P+
Sbjct: 647 VLHPNPV 653
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 4 PRPINFK 10
P+P NFK
Sbjct: 1405 PQPANFK 1411
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 2 LHPRPIN 8
+HP PIN
Sbjct: 283 VHPPPIN 289
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 ILHPRPIN 8
+L PRPI+
Sbjct: 1157 LLSPRPIS 1164
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 ILHPRPIN 8
+L PRPI+
Sbjct: 1153 LLSPRPIS 1160
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 ILHPRPIN 8
+L PRPI+
Sbjct: 1157 LLSPRPIS 1164
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 ILHPRPIN 8
+L PRPI+
Sbjct: 1156 LLSPRPIS 1163
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 ILHPRPI 7
++HP PI
Sbjct: 812 VMHPTPI 818
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 ILHPRPIN 8
+L PRPI+
Sbjct: 1154 LLSPRPIS 1161
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 ILHPRPIN 8
+L PRPI+
Sbjct: 1156 LLSPRPIS 1163
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 3 HPRPI 7
HPRP+
Sbjct: 459 HPRPV 463
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 ILHPRPIN 8
+L PRPI+
Sbjct: 1152 LLSPRPIS 1159
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 3 HPRPI 7
HPRP+
Sbjct: 462 HPRPV 466
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 4 PRPINFK 10
P P NFK
Sbjct: 1397 PTPANFK 1403
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ILHPRPIN 8
+ H +PIN
Sbjct: 317 VFHSQPIN 324
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ILHPRPIN 8
+ H +PIN
Sbjct: 317 VFHSQPIN 324
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ILHPRPIN 8
+ H +PIN
Sbjct: 314 VFHSQPIN 321
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ILHPRPIN 8
+ H +PIN
Sbjct: 323 VFHSQPIN 330
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 ILHPRPINF 9
ILH PI++
Sbjct: 264 ILHAVPIDY 272
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PRPIN 8
PRP+N
Sbjct: 53 PRPVN 57
>sp|VCP_VACCC|COMPLEMENT control protein C3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 RPINFK 10
RPIN K
Sbjct: 26 RPINMK 31
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 1 ILHPRPINF 9
ILH PI++
Sbjct: 264 ILHAVPIDY 272
>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)
Query: 3 HPRPI 7
HP+PI
Sbjct: 251 HPKPI 255
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PRPIN 8
PRP+N
Sbjct: 53 PRPVN 57
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 HPRP 6
HPRP
Sbjct: 1717 HPRP 1720
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 HPRP 6
HPRP
Sbjct: 1717 HPRP 1720
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 3 HPRPINFK 10
HP PI K
Sbjct: 154 HPEPIILK 161
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 ILHPRPI 7
+ HPRP+
Sbjct: 21 LYHPRPL 27
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 HPRP 6
HPRP
Sbjct: 1717 HPRP 1720
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 HPRP 6
HPRP
Sbjct: 1717 HPRP 1720
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 HPRP 6
HPRP
Sbjct: 1717 HPRP 1720
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 HPRP 6
HPRP
Sbjct: 1717 HPRP 1720
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 HPRP 6
HPRP
Sbjct: 1717 HPRP 1720
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 HPRP 6
HPRP
Sbjct: 1717 HPRP 1720
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 HPRP 6
HPRP
Sbjct: 1717 HPRP 1720
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 ILHPRPIN 8
++ PRPI+
Sbjct: 1156 LISPRPIS 1163
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 3 HPRPINFK 10
HP PI K
Sbjct: 154 HPEPIILK 161
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 2 LHPRPI 7
L+PRP+
Sbjct: 698 LYPRPL 703
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 ILHPRPINF 9
++HP P+
Sbjct: 1142 VMHPDPLTL 1150
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 2 LHPRPI 7
L+PRP+
Sbjct: 696 LYPRPL 701
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 4 PRPINFK 10
P+P NF+
Sbjct: 371 PKPTNFE 377
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 ILHPRPINF 9
+LH R I+F
Sbjct: 451 VLHGRVISF 459
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PRPINFK 10
P+P NF+
Sbjct: 371 PKPTNFE 377
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 4 PRPINFK 10
P+P NF+
Sbjct: 346 PKPTNFE 352
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 HPRPINFK 10
HP PI K
Sbjct: 154 HPEPIVVK 161
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 1 ILHPRPINFK 10
++HP P N K
Sbjct: 516 LIHPPPGNNK 525
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 1 ILHPRPINFK 10
++HP P N K
Sbjct: 516 LIHPPPGNNK 525
84|Sequence|416|425|PINFKFYKHS
>sp|M2_I57A3|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 3 NFKFYKH 9
N++F+KH
Sbjct: 51 NYRFFKH 57
>sp|M2_I57A2|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 3 NFKFYKH 9
N++F+KH
Sbjct: 51 NYRFFKH 57
>sp|M2_I57A1|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 3 NFKFYKH 9
N++F+KH
Sbjct: 51 NYRFFKH 57
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 1 PINFKFYKHS 10
P+N Y HS
Sbjct: 60 PVNVATYSHS 69
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 1 PINFKFYKHS 10
P FYKH+
Sbjct: 265 PTALYFYKHA 274
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 2 INFKFYKHS 10
INFK +HS
Sbjct: 206 INFKALQHS 214
>sp|CAP9_ADE12|HEXON-INTERLACING protein IX|Human adenovirus A serotype 12
Query: 3 NFKFYKH 9
+F FY H
Sbjct: 84 DFSFYNH 90
>sp|M2_I82A9|MATRIX protein 2|Influenza A virus (strain A/Philippines/2/1982
Query: 4 FKFYKH 9
++F+KH
Sbjct: 52 YRFFKH 57
>sp|M2_I80A4|MATRIX protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 4 FKFYKH 9
++F+KH
Sbjct: 52 YRFFKH 57
>sp|M2_I79A0|MATRIX protein 2|Influenza A virus (strain A/Bangkok/1/1979
Query: 4 FKFYKH 9
++F+KH
Sbjct: 52 YRFFKH 57
>sp|M2_I57A5|MATRIX protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 4 FKFYKH 9
++F+KH
Sbjct: 52 YRFFKH 57
>sp|M2_I57A0|MATRIX protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 4 FKFYKH 9
++F+KH
Sbjct: 52 YRFFKH 57
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 4 FKFYKHS 10
F F+KH+
Sbjct: 1715 FDFFKHN 1721
>sp|M2_I60A0|MATRIX protein 2|Influenza A virus (strain A/Ann
Query: 4 FKFYKH 9
++F+KH
Sbjct: 52 YRFFKH 57
>sp|M2_I68A5|MATRIX protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 4 FKFYKH 9
++F+KH
Sbjct: 52 YRFFKH 57
>sp|VCP_VACCC|COMPLEMENT control protein C3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PINFKF 6
PIN KF
Sbjct: 27 PINMKF 32
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 5 KFYKH 9
+FYKH
Sbjct: 97 RFYKH 101
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 NFKFYKH 9
N FYKH
Sbjct: 829 NRGFYKH 835
85|Sequence|421|430|FYKHSMKFVA
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 1 FYKHSM 6
FYKH+M
Sbjct: 270 FYKHAM 275
86|Sequence|426|435|MKFVAALSVL
>sp|US10_CHV1|VIRION protein US10 homolog|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 1 MKFVAALS 8
M FVAAL+
Sbjct: 144 MNFVAALA 151
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 MKFVAALS 8
M F+AALS
Sbjct: 1291 MPFLAALS 1298
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 3 FVAALSVL 10
F+A LSVL
Sbjct: 482 FMACLSVL 489
87|Sequence|431|440|ALSVLALLGT
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 ALSVLALLGT 10
ALS ++L+GT
Sbjct: 1361 ALSAISLVGT 1370
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 1 ALSVLALL 8
ALSVLA+L
Sbjct: 25 ALSVLAVL 32
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 ALSVLALLGT 10
ALS ++L+GT
Sbjct: 1364 ALSAISLVGT 1373
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 1 ALSVLALL 8
ALS+LA+L
Sbjct: 25 ALSILAIL 32
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 2 LSVLALLGT 10
LS+L LGT
Sbjct: 158 LSILDFLGT 166
>sp|GLYC_HRSVB|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 1 ALSVLALL 8
ALSVLA++
Sbjct: 42 ALSVLAMI 49
>sp|GLYC_HRSV8|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 1 ALSVLALL 8
ALSVLA++
Sbjct: 42 ALSVLAMI 49
>sp|GLYC_HRSV1|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 1 ALSVLALL 8
ALSVLA++
Sbjct: 42 ALSVLAMI 49
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LSVLALLGT 10
LS+L LGT
Sbjct: 442 LSILDFLGT 450
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 2 LSVLALLGT 10
LS+L LGT
Sbjct: 442 LSILDFLGT 450
88|Sequence|436|445|ALLGTIYSIF
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 LLGTIYSIF 10
+LGT+Y+++
Sbjct: 1473 ILGTVYALY 1481
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 ALLGTIYSIF 10
AL+G +Y+++
Sbjct: 2472 ALIGIVYNLW 2481
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 4 GTIYSI 9
GTIYSI
Sbjct: 489 GTIYSI 494
89|Sequence|441|450|IYSIFILYRN
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 1 IYSIFILYRN 10
IY F+++RN
Sbjct: 130 IYQEFLMHRN 139
>sp|VE6_HPV70|PROTEIN E6|Human papillomavirus type 70
Query: 4 IFILYRN 10
+FI+YRN
Sbjct: 52 LFIVYRN 58
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 IYSIFILYR 9
IY ++LYR
Sbjct: 261 IYGSYLLYR 269
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IYSIFILYR 9
IY ++LYR
Sbjct: 261 IYGSYLLYR 269
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IYSIFILYR 9
IY ++LYR
Sbjct: 261 IYGSYLLYR 269
>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus
Query: 4 IFILYRN 10
I+ILY N
Sbjct: 299 IYILYSN 305
>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate
Query: 4 IFILYRN 10
I+ILY N
Sbjct: 299 IYILYSN 305
>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)
Query: 4 IFILYRN 10
I+ILY N
Sbjct: 299 IYILYSN 305
>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /
Query: 4 IFILYRN 10
I+ILY N
Sbjct: 301 IYILYSN 307
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 1 IYSIFILYR 9
I S+F+L+R
Sbjct: 369 IESLFLLWR 377
90|Sequence|446|455|ILYRNRVPLN
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 ILYRNRVPLN 10
I +RN P+N
Sbjct: 7004 IFWRNSTPMN 7013
>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 LYRNRVP 8
+YR RVP
Sbjct: 337 MYRGRVP 343
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 YRNRVPL 9
+RN++PL
Sbjct: 1779 FRNKLPL 1785
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 YRNRVPL 9
YR R+PL
Sbjct: 253 YRGRLPL 259
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 ILYRNRVPL 9
IL+ N +PL
Sbjct: 1363 ILFENGIPL 1371
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 ILYRNRVPL 9
IL+ N +PL
Sbjct: 1363 ILFENGIPL 1371
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 5 NRVPLN 10
NRVP+N
Sbjct: 2103 NRVPVN 2108
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 5 NRVPLN 10
NRVP+N
Sbjct: 2103 NRVPVN 2108
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 5 NRVPLN 10
NRVP+N
Sbjct: 2104 NRVPVN 2109
>sp|GAAP_VACCL|GOLGI anti-apoptotic protein|Vaccinia virus (strain Lister) (VACV)
Query: 2 LYRNRVPLN 10
L+R++ PLN
Sbjct: 88 LHRHKHPLN 96
>sp|GAAP_VACC8|GOLGI anti-apoptotic protein|Vaccinia virus (strain LC16m8) (VACV)
Query: 2 LYRNRVPLN 10
L+R++ PLN
Sbjct: 88 LHRHKHPLN 96
>sp|GAAP_VACC0|GOLGI anti-apoptotic protein|Vaccinia virus (strain LC16m0) (VACV)
Query: 2 LYRNRVPLN 10
L+R++ PLN
Sbjct: 88 LHRHKHPLN 96
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 LYRNRVPLN 10
++ NR P+N
Sbjct: 2053 VWNNRFPIN 2061
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 ILYRNRVPL 9
+ Y NR PL
Sbjct: 678 VYYYNRYPL 686
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 ILYRNRVPL 9
I YRN VP
Sbjct: 47 IEYRNDVPF 55
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 ILYRNRVPL 9
I YRN VP
Sbjct: 47 IEYRNDVPF 55
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 ILYRNRVPL 9
I Y NR P+
Sbjct: 678 IYYYNRYPM 686
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 ILYRNRVPL 9
I Y NR P+
Sbjct: 678 IYYYNRYPM 686
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 ILYRNRVPL 9
+ Y NR PL
Sbjct: 677 VYYYNRYPL 685
>sp|VE6_HPVME|PROTEIN E6|Human papillomavirus type ME180
Query: 1 ILYRNRVPL 9
++YR+ VPL
Sbjct: 54 VVYRDGVPL 62
>sp|RP22_VACCC|DNA-DIRECTED RNA polymerase 22 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ILYRNRVPL 9
ILYR +PL
Sbjct: 151 ILYRPNIPL 159
>sp|RP22_MONPV|DNA-DIRECTED RNA polymerase 22 kDa|Monkeypox virus (MPXV)
Query: 1 ILYRNRVPL 9
ILYR +PL
Sbjct: 151 ILYRPNIPL 159
>sp|RP22_VAR67|DNA-DIRECTED RNA polymerase 22 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 ILYRNRVPL 9
ILYR +PL
Sbjct: 151 ILYRPNIPL 159
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 2 LYRNRV 7
LY+NRV
Sbjct: 237 LYKNRV 242
>sp|VE6_HPV26|PROTEIN E6|Human papillomavirus type 26
Query: 1 ILYRNRVP 8
++YR+R P
Sbjct: 52 VVYRDRSP 59
>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain
Query: 5 NRVPLN 10
NR+P+N
Sbjct: 400 NRIPVN 405
91|Sequence|451|460|RVPLNEIVIR
>sp|VE6_HPV24|PROTEIN E6|Human papillomavirus 24
Query: 3 PLNEIVIR 10
PL++I++R
Sbjct: 93 PLSDIIVR 100
>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12
Query: 1 RVPLNEIVIR 10
R P N+I++R
Sbjct: 424 RFPENQILVR 433
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 VPLNEI 7
VP+NEI
Sbjct: 253 VPVNEI 258
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PLNEIVI 9
P NE+V+
Sbjct: 682 PYNEVVV 688
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 1 RVPLNEIV 8
+ PLN++V
Sbjct: 188 QTPLNDVV 195
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 PLNEIVI 9
P NE+V+
Sbjct: 681 PYNEVVV 687
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PLNEIVI 9
P NE+V+
Sbjct: 681 PYNEVVV 687
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 RVPLNEIV 8
+ PLN++V
Sbjct: 188 QTPLNDVV 195
92|Sequence|456|465|EIVIRALDLV
>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)
Query: 1 EIVIRALDLV 10
EIV+R DL+
Sbjct: 118 EIVLRLYDLI 127
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EIVIRALDLV 10
EIV+R DL+
Sbjct: 118 EIVLRLYDLI 127
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 EIVIRAL 7
E+VIRAL
Sbjct: 2132 ELVIRAL 2138
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 EIVIRAL 7
E+VIRAL
Sbjct: 2132 ELVIRAL 2138
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 VIRALDL 9
V+RALD+
Sbjct: 155 VVRALDV 161
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EIVIRALDLV 10
EIV R DL+
Sbjct: 494 EIVARTPDLI 503
93|Sequence|461|470|ALDLVTVVVP
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 ALDLVTVVVP 10
ALDL+ V+P
Sbjct: 1313 ALDLLYDVIP 1322
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 ALDLVTVVVP 10
ALDL+ V+P
Sbjct: 1312 ALDLLYDVIP 1321
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 ALDLVTV 7
ALDLVT+
Sbjct: 777 ALDLVTL 783
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 ALDLVTVV 8
ALDLVT +
Sbjct: 2095 ALDLVTEI 2102
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 ALDLVTVV 8
ALDLVT +
Sbjct: 2095 ALDLVTEI 2102
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 ALDLVTVV 8
ALDLVT +
Sbjct: 2095 ALDLVTEI 2102
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 ALDLVTVV 8
ALDLVT +
Sbjct: 2095 ALDLVTEI 2102
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 ALDLVTVV 8
ALDLVT +
Sbjct: 2095 ALDLVTEI 2102
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ALDLVTVVV 9
LDL TVV+
Sbjct: 594 GLDLATVVM 602
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ALDLVTVVV 9
LDL TVV+
Sbjct: 595 GLDLATVVM 603
94|Sequence|466|475|TVVVPPALPA
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 VVPPALPA 10
VVPP LPA
Sbjct: 15 VVPPELPA 22
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 VVVPPALPA 10
+VVPP P+
Sbjct: 529 IVVPPETPS 537
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 VVVPPALPA 10
+VVPP P+
Sbjct: 529 IVVPPETPS 537
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 VVVPPALP 9
VV PP LP
Sbjct: 1388 VVNPPLLP 1395
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 VVVPPALP 9
VV PP LP
Sbjct: 1388 VVNPPLLP 1395
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 VVPPALPA 10
V+PP LPA
Sbjct: 15 VMPPELPA 22
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 VVVPPALP 9
VV PP LP
Sbjct: 1388 VVNPPLLP 1395
>sp|ORF23_TTVV5|PROBABLE protein VP2|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 5 PPALP 9
PPALP
Sbjct: 77 PPALP 81
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 PPALPA 10
PPALPA
Sbjct: 2282 PPALPA 2287
>sp|ORF9B_SARS|ORF9B protein|Severe acute respiratory syndrome coronavirus
Query: 1 TVVVPPAL 8
T VVPPAL
Sbjct: 6 TNVVPPAL 13
>sp|E1BS_ADE07|E1B protein, small T-antigen|Human adenovirus B serotype 7
Query: 5 PPALPA 10
PP +PA
Sbjct: 152 PPTMPA 157
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 4 VPPALPA 10
VPP LPA
Sbjct: 525 VPPRLPA 531
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 4 VPPALPA 10
VPP LPA
Sbjct: 524 VPPRLPA 530
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 VPPALP 9
+PP LP
Sbjct: 231 IPPPLP 236
95|Sequence|471|480|PALPAAMTVC
>sp|U15_HHV6Z|PROTEIN U15|Human herpesvirus 6B (strain Z29)
Query: 1 PALPAAMTV 9
PAL +MTV
Sbjct: 53 PALTLSMTV 61
>sp|U15_HHV6U|UNCHARACTERIZED protein U15|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PALPAAMTV 9
PAL +MTV
Sbjct: 53 PALTLSMTV 61
>sp|VME1_CVHOC|MEMBRANE protein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 LPAAMTV 9
LPA MTV
Sbjct: 170 LPAYMTV 176
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 PALPAAMT 8
PA+P AM+
Sbjct: 95 PAIPGAMS 102
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 PALPAAMTVC 10
PAL TVC
Sbjct: 4449 PALVDKRTVC 4458
96|Sequence|476|485|AMTVCTLYAQ
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 AMTVCTLY 8
A+TVC+ +
Sbjct: 1321 ALTVCSFF 1328
>sp|VP7_ROTGA|OUTER capsid glycoprotein VP7|Rotavirus B (isolate
Query: 4 VCTLYA 9
VC LYA
Sbjct: 27 VCVLYA 32
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 MTVCTLYA 9
+T+C LY+
Sbjct: 2248 VTICDLYS 2255
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 MTVCTLYA 9
+T+C LY+
Sbjct: 2248 VTICDLYS 2255
97|Sequence|481|490|TLYAQSRLRR
>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)
Query: 2 LYAQSRLR 9
LYAQ +LR
Sbjct: 161 LYAQCKLR 168
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 2 LYAQSRLRR 10
LYA SRL R
Sbjct: 68 LYAMSRLGR 76
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 2 LYAQSRLRR 10
LYA SRL R
Sbjct: 68 LYAMSRLGR 76
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 2 LYAQSRLRR 10
LYA SRL R
Sbjct: 68 LYAMSRLGR 76
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 2 LYAQSRLRR 10
LYA SRL R
Sbjct: 68 LYAMSRLGR 76
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 2 LYAQSRLR 9
LYAQ +LR
Sbjct: 161 LYAQCKLR 168
>sp|VU84_HHV6Z|PROTEIN U84|Human herpesvirus 6B (strain Z29)
Query: 2 LYAQSRLRR 10
+YA S+LR+
Sbjct: 89 IYAHSKLRK 97
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 4 AQSRLRR 10
QSRLRR
Sbjct: 301 GQSRLRR 307
>sp|VE8E2_HPV63|PROTEIN E8^E2C|Human papillomavirus type 63
Query: 4 AQSRLRR 10
QSRLRR
Sbjct: 110 GQSRLRR 116
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 LYAQSRL 8
LY+Q+RL
Sbjct: 453 LYSQNRL 459
98|Sequence|486|495|SRLRRQGIFC
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 SRLRRQGIF 9
S LRR+G+F
Sbjct: 1945 STLRRKGVF 1953
>sp|BMRF2_EBVB9|PROTEIN BMRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 RRQGIFC 10
RR+ IFC
Sbjct: 191 RRRSIFC 197
>sp|BMRF2_EBVG|PROTEIN BMRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 RRQGIFC 10
RR+ IFC
Sbjct: 191 RRRSIFC 197
>sp|BMRF2_EBVA8|PROTEIN BMRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 RRQGIFC 10
RR+ IFC
Sbjct: 191 RRRSIFC 197
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 SRLRRQGIF 9
S LR+QG+
Sbjct: 1925 SSLRKQGLL 1933
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 LRRQGI 8
LRRQG+
Sbjct: 1097 LRRQGL 1102
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 RQGIFC 10
R G+FC
Sbjct: 79 RDGLFC 84
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 RQGIFC 10
R G+FC
Sbjct: 79 RDGLFC 84
>sp|NS12_CVHOC|NON-STRUCTURAL protein of 12.9 kDa|Human coronavirus OC43 (HCoV-OC43)
Query: 4 RRQGIFC 10
R QG FC
Sbjct: 48 RNQGRFC 54
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 2 RLRRQGIF 9
RLR G+F
Sbjct: 431 RLRNYGVF 438
99|Sequence|491|500|QGIFCIHPLR
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 5 CIHPL 9
CIHPL
Sbjct: 573 CIHPL 577
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 CIHPL 9
CIHPL
Sbjct: 575 CIHPL 579
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 CIHPL 9
CIHPL
Sbjct: 575 CIHPL 579
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 CIHPL 9
CIHPL
Sbjct: 575 CIHPL 579
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 CIHPL 9
CIHPL
Sbjct: 575 CIHPL 579
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 CIHPL 9
CIHPL
Sbjct: 573 CIHPL 577
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 CIHPL 9
CIHPL
Sbjct: 573 CIHPL 577
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 CIHPL 9
CIHPL
Sbjct: 573 CIHPL 577
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 QGIFCIHPLR 10
Q FC PL+
Sbjct: 1154 QSFFCTGPLK 1163
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 QGIFCI 6
+GIFCI
Sbjct: 5566 KGIFCI 5571
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 4 FCIHPL 9
C+HPL
Sbjct: 1252 LCLHPL 1257
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 5 CIHPLR 10
C+HP R
Sbjct: 449 CMHPFR 454
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 2 GIFCIH 7
G++C+H
Sbjct: 11 GVYCVH 16
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 6 IHPLR 10
IHPLR
Sbjct: 17 IHPLR 21
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 QGIFCI 6
+GIFC+
Sbjct: 5541 KGIFCV 5546
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 QGIFCI 6
+GIFC+
Sbjct: 5904 KGIFCV 5909
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 QGIFCI 6
+GIFC+
Sbjct: 5924 KGIFCV 5929
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 QGIFCI 6
+GIFC+
Sbjct: 5954 KGIFCV 5959
>sp|UL130_HCMVM|ENVELOPE glycoprotein UL130|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 FCIHP 8
FC HP
Sbjct: 206 FCTHP 210
>sp|UL130_HCMVA|UNCHARACTERIZED protein UL130|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 FCIHP 8
FC HP
Sbjct: 206 FCTHP 210
>sp|UL92_HHV8P|PROTEIN ORF31|Human herpesvirus 8 type P
Query: 1 QGIFCIHPLR 10
G+FC++ R
Sbjct: 12 HGVFCLYQCR 21
>sp|E3145_ADE06|EARLY E3B 14 kDa protein|Human adenovirus C serotype 6
Query: 1 QGIFCI 6
+GIFC+
Sbjct: 46 RGIFCV 51
>sp|E3145_ADE02|EARLY 3 14.7 kDa protein|Human adenovirus C serotype 2
Query: 1 QGIFCI 6
+GIFC+
Sbjct: 46 RGIFCV 51
>sp|NS4B_CVH22|NON-STRUCTURAL protein 4b|Human coronavirus 229E (HCoV-229E)
Query: 3 IFCIHP 8
+FC HP
Sbjct: 69 LFCEHP 74
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 5 CIHP 8
C+HP
Sbjct: 98 CVHP 101
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QGIFCIH 7
QG+ C H
Sbjct: 213 QGLLCNH 219
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QGIFCIH 7
QG+ C H
Sbjct: 213 QGLLCNH 219
>sp|E3145_ADE03|EARLY E3 15.3 kDa protein|Human adenovirus B serotype 3
Query: 1 QGIFCI 6
+GIFC+
Sbjct: 54 KGIFCL 59
>sp|E3145_ADE05|EARLY E3 14.5 kDa protein|Human adenovirus C serotype 5
Query: 1 QGIFCI 6
+GIFC+
Sbjct: 46 RGIFCL 51
>sp|E3145_ADE07|EARLY E3 15.3 kDa protein|Human adenovirus B serotype 7
Query: 1 QGIFCI 6
+GIFC+
Sbjct: 53 KGIFCL 58
100|Sequence|496|505|IHPLRINLGG
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 HPLRINLGG 10
HPL IN+ G
Sbjct: 189 HPLSINVSG 197
>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)
Query: 2 HPLRINLGG 10
HPL IN+ G
Sbjct: 189 HPLSINVSG 197
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 HPLRINLGG 10
HPLR +GG
Sbjct: 257 HPLRGEIGG 265
>sp|PHOSP_DUVV|PHOSPHOPROTEIN virus (DUVV)
Query: 3 PLRINLGG 10
PLR LGG
Sbjct: 259 PLRCMLGG 266
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 IHPLRINLGG 10
IH +R+ +GG
Sbjct: 630 IHKIRMFIGG 639
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 IHPLRINLGG 10
IH +R+ +GG
Sbjct: 627 IHKVRVFVGG 636
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 2 HPLRINLGG 10
HPL LGG
Sbjct: 78 HPLFTYLGG 86
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 IHPLRINLGG 10
IH +R+ +GG
Sbjct: 631 IHKVRMFIGG 640
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 1 IHPLRIN 7
++PLR+N
Sbjct: 794 VNPLRLN 800
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IHPLRIN 7
++PLR+N
Sbjct: 794 VNPLRLN 800
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 3 PLRINLGG 10
PLR ++GG
Sbjct: 530 PLRNSIGG 537
>sp|TEG6_VZVO|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 HPLRINL 8
P+R+NL
Sbjct: 11 QPIRVNL 17
>sp|TEG6_VZVD|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 HPLRINL 8
P+R+NL
Sbjct: 11 QPIRVNL 17
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 3 PLRINLGG 10
PLR ++GG
Sbjct: 530 PLRNSIGG 537
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 IHPLRINLGG 10
IH +R+ +GG
Sbjct: 628 IHKVRMFVGG 637
>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)
Query: 1 IHPLRINL 8
+HP +NL
Sbjct: 237 VHPTLVNL 244
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 1 IHPLRIN 7
++PLR+N
Sbjct: 790 LNPLRLN 796
101|Sequence|501|510|INLGGKLQLV
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 INLGGKLQLV 10
IN+ G+L+LV
Sbjct: 620 INVTGELELV 629
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 2 NLGGKL 7
NLGGK+
Sbjct: 274 NLGGKM 279
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 1 INLGGKLQL 9
INLG LQ+
Sbjct: 279 INLGPGLQM 287
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 1 INLGGKLQL 9
INLG LQ+
Sbjct: 294 INLGPGLQM 302
102|Sequence|506|515|KLQLVCFDKT
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 3 QLVCFDK 9
QLVC DK
Sbjct: 51 QLVCRDK 57
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 3 QLVCFDK 9
QLVC DK
Sbjct: 51 QLVCRDK 57
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92)
Query: 3 QLVCFDK 9
QLVC DK
Sbjct: 51 QLVCRDK 57
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 QLVCFDK 9
QLVC DK
Sbjct: 51 QLVCRDK 57
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 QLVCFDK 9
QLVC DK
Sbjct: 51 QLVCRDK 57
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92)
Query: 3 QLVCFDK 9
QLVC DK
Sbjct: 51 QLVCRDK 57
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 QLVCFDK 9
QLVC DK
Sbjct: 51 QLVCRDK 57
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 QLVCFDK 9
QLVC DK
Sbjct: 51 QLVCRDK 57
>sp|US12_HCMVA|UNCHARACTERIZED protein HVLF6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 VCFDKT 10
+CFD+T
Sbjct: 135 LCFDRT 140
>sp|US12_HCMVM|UNCHARACTERIZED protein US12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 VCFDKT 10
+CFD+T
Sbjct: 135 LCFDRT 140
>sp|HEMA_CVHN1|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N1)
Query: 5 VCFDKT 10
+CFDK+
Sbjct: 245 LCFDKS 250
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 4 LVCFDK 9
++CFD+
Sbjct: 222 VICFDR 227
>sp|GN_EBVG|ENVELOPE glycoprotein N|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LQLVCFDK 9
L VCF+K
Sbjct: 87 LMYVCFNK 94
>sp|GN_EBVB9|ENVELOPE glycoprotein N|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LQLVCFDK 9
L VCF+K
Sbjct: 87 LMYVCFNK 94
>sp|GN_EBVA8|ENVELOPE glycoprotein N|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LQLVCFDK 9
L VCF+K
Sbjct: 87 LMYVCFNK 94
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 2 LQLVCFDK 9
LQL FDK
Sbjct: 218 LQLYFFDK 225
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 2 LQLVCFDK 9
LQL FDK
Sbjct: 218 LQLYFFDK 225
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 2 LQLVCFDKT 10
L + C+DKT
Sbjct: 190 LYVACYDKT 198
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 LVCFDKT 10
+VC++KT
Sbjct: 4826 VVCYNKT 4832
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 2 LQLVCFDKT 10
+QL+C D +
Sbjct: 14 MQLLCLDMS 22
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 2 LQLVCFDKT 10
+QL+C D +
Sbjct: 14 MQLLCLDMS 22
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 2 LQLVCFDKT 10
+QL+C D +
Sbjct: 14 MQLLCLDMS 22
103|Sequence|511|520|CFDKTGTLTE
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FDKTGTLTE 10
FD TG+L E
Sbjct: 67 FDLTGSLEE 75
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 1 CFDKTGT 7
CF TGT
Sbjct: 535 CFKNTGT 541
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 1 CFDKTGT 7
CF TGT
Sbjct: 535 CFKNTGT 541
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 FDKTGTLTE 10
D T TLTE
Sbjct: 192 LDSTSTLTE 200
>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 FDKTGTLTE 10
D T TLTE
Sbjct: 192 LDSTSTLTE 200
>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8
Query: 2 FDKTGTLTE 10
FDK G L E
Sbjct: 246 FDKNGVLME 254
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 FDKTGTL 8
FD TG+L
Sbjct: 830 FDNTGSL 836
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 FDKTGTL 8
FD TG+L
Sbjct: 832 FDNTGSL 838
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 2 FDKTGTL 8
FD TG+L
Sbjct: 832 FDNTGSL 838
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 FDKTGTL 8
FD TG+L
Sbjct: 832 FDNTGSL 838
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 2 FDKTGTLT 9
F +TGT+T
Sbjct: 183 FSETGTVT 190
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 2 FDKTGTLT 9
FD TG +T
Sbjct: 383 FDSTGAIT 390
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFDKTGTL 8
CF K+G L
Sbjct: 1014 CFIKSGIL 1021
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFDKTGTL 8
CF K+G L
Sbjct: 1020 CFVKSGIL 1027
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFDKTGTL 8
CF K+G L
Sbjct: 1020 CFVKSGIL 1027
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFDKTGTL 8
CF K+G L
Sbjct: 1020 CFVKSGIL 1027
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFDKTGTL 8
CF K+G L
Sbjct: 1020 CFVKSGIL 1027
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFDKTGTL 8
CF K+G L
Sbjct: 1020 CFVKSGIL 1027
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFDKTGTL 8
CF K+G L
Sbjct: 1020 CFVKSGIL 1027
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFDKTGTL 8
CF K+G L
Sbjct: 1020 CFVKSGIL 1027
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFDKTGTL 8
CF K+G L
Sbjct: 1020 CFVKSGIL 1027
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFDKTGTL 8
CF K+G L
Sbjct: 1020 CFVKSGIL 1027
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 4 KTGTLT 9
+TGTLT
Sbjct: 28 RTGTLT 33
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CFDKTGTL 8
C D GTL
Sbjct: 555 CCDAAGTL 562
104|Sequence|516|525|GTLTEDGLDV
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 2 TLTEDGLD 9
+L EDGLD
Sbjct: 173 SLVEDGLD 180
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 4 TEDGLDV 10
TE+GLDV
Sbjct: 500 TEEGLDV 506
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster
Query: 1 GTLTEDGLDV 10
G LT++GL V
Sbjct: 28 GQLTQNGLSV 37
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster
Query: 1 GTLTEDGLDV 10
G LT++GL V
Sbjct: 28 GQLTQNGLSV 37
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 LTEDGLDV 10
+TEDG++V
Sbjct: 1586 ITEDGINV 1593
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 LTEDGLDV 10
+TEDG++V
Sbjct: 1586 ITEDGINV 1593
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 1 GTLTED 6
GTLTED
Sbjct: 673 GTLTED 678
>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)
Query: 1 GTLTEDGL 8
GTLT+D L
Sbjct: 327 GTLTDDKL 334
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas)
Query: 2 TLTEDGLDV 10
T E+GLDV
Sbjct: 43 TRAEEGLDV 51
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 LTEDGLDV 10
+TEDG++V
Sbjct: 1607 VTEDGVNV 1614
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 LTEDGLDV 10
+TEDG++V
Sbjct: 1607 VTEDGVNV 1614
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 4 TEDGLD 9
+EDGLD
Sbjct: 1332 SEDGLD 1337
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 2 TLTEDG 7
T+TEDG
Sbjct: 92 TITEDG 97
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 TEDGLDV 10
TED LDV
Sbjct: 512 TEDTLDV 518
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 GTLTEDG 7
G+L EDG
Sbjct: 836 GSLQEDG 842
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 TLTEDGLDV 10
TLT GL+V
Sbjct: 611 TLTSAGLEV 619
>sp|PG209_MONPV|PROTEIN OPG209|Monkeypox virus (MPXV)
Query: 4 TEDGLDV 10
T DGLD+
Sbjct: 75 TPDGLDI 81
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 TEDGLDV 10
TED LDV
Sbjct: 3317 TEDMLDV 3323
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 TEDGLDV 10
TED LDV
Sbjct: 3317 TEDMLDV 3323
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 TEDGLDV 10
TED LDV
Sbjct: 3318 TEDMLDV 3324
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 4 TEDGLDV 10
TED LDV
Sbjct: 3318 TEDMLDV 3324
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 4 TEDGLDV 10
TED LDV
Sbjct: 3318 TEDMLDV 3324
105|Sequence|521|530|DGLDVMGVVP
>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)
Query: 3 LDVMGVVP 10
LDV+GV P
Sbjct: 169 LDVVGVTP 176
>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)
Query: 3 LDVMGVVP 10
LDV+GV P
Sbjct: 169 LDVVGVTP 176
>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)
Query: 3 LDVMGVVP 10
LDV+GV P
Sbjct: 169 LDVVGVTP 176
>sp|UL79_HHV8P|PROTEIN UL79 homolog|Human herpesvirus 8 type P
Query: 1 DGLDVMGV 8
DGL+ MGV
Sbjct: 86 DGLEEMGV 93
>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)
Query: 2 GLDVMGVVP 10
G+DV+ VP
Sbjct: 35 GVDVLAAVP 43
>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)
Query: 1 DGLDVM 6
DGLDV+
Sbjct: 69 DGLDVL 74
106|Sequence|526|535|MGVVPLKGQA
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 4 VPLKGQA 10
VPL GQA
Sbjct: 793 VPLAGQA 799
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 4 VPLKGQA 10
VPL GQA
Sbjct: 793 VPLAGQA 799
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 MGVVPLKG 8
+ VVP+KG
Sbjct: 174 LDVVPIKG 181
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 MGVVPLK 7
+G+VP+K
Sbjct: 668 VGIVPMK 674
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 GVVPLK 7
G++PLK
Sbjct: 670 GIIPLK 675
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 GVVPLK 7
GVVP+K
Sbjct: 1811 GVVPVK 1816
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 VVPLKGQ 9
VVP +GQ
Sbjct: 3259 VVPCRGQ 3265
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 VVPLKGQ 9
VVP +GQ
Sbjct: 3258 VVPCRGQ 3264
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 VVPLKGQ 9
VVP +GQ
Sbjct: 3255 VVPCRGQ 3261
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 VVPLKGQ 9
VVP +GQ
Sbjct: 3257 VVPCRGQ 3263
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 VVPLKGQ 9
VVP +GQ
Sbjct: 3259 VVPCRGQ 3265
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 VVPLKGQ 9
VVP +GQ
Sbjct: 3257 VVPCRGQ 3263
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 VVPLKGQ 9
VVP +GQ
Sbjct: 3257 VVPCRGQ 3263
>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)
Query: 2 GVVPLKGQA 10
G +PL GQA
Sbjct: 285 GSLPLIGQA 293
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 VVPLKGQ 9
VVP +GQ
Sbjct: 3257 VVPCRGQ 3263
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 MGVVPLK 7
+G++P+K
Sbjct: 668 VGIIPMK 674
107|Sequence|531|540|LKGQAFLPLV
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 2 KGQAFLPLV 10
+GQ FLP +
Sbjct: 415 QGQEFLPFM 423
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 3 GQAFLPL 9
GQ+F PL
Sbjct: 200 GQSFTPL 206
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 QAFLPLV 10
+AFLPL+
Sbjct: 58 EAFLPLM 64
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 QAFLPLV 10
+AFLPL+
Sbjct: 58 EAFLPLM 64
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QAFLPLV 10
Q FLPL+
Sbjct: 750 QGFLPLL 756
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 LKGQAFLP 8
L GQ +LP
Sbjct: 675 LPGQTYLP 682
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 KGQAFLPL 9
KGQ+ LP+
Sbjct: 1593 KGQSSLPV 1600
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 KGQAFLPL 9
KGQ+ LP+
Sbjct: 1593 KGQSSLPV 1600
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 KGQAFLPL 9
KGQ+ LP+
Sbjct: 1593 KGQSSLPV 1600
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 KGQAFLPL 9
KGQ+ LP+
Sbjct: 1593 KGQSSLPV 1600
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GQAFLPL 9
GQAF P+
Sbjct: 522 GQAFAPV 528
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GQAFLPL 9
GQAF P+
Sbjct: 522 GQAFAPV 528
108|Sequence|536|545|FLPLVPEPRR
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 PLVPEPRR 10
P VP+PRR
Sbjct: 1818 PPVPKPRR 1825
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 LVPEPRR 10
L+PEP R
Sbjct: 2235 LIPEPER 2241
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 2 LPLVPEP 8
LP+ PEP
Sbjct: 399 LPMTPEP 405
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 FLPLVPEPR 9
F LVP PR
Sbjct: 706 FQTLVPNPR 714
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 PLVPEPRR 10
P VP PRR
Sbjct: 2319 PPVPSPRR 2326
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 PLVPEPRR 10
PL+P+P++
Sbjct: 678 PLLPKPQK 685
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 FLPLVPEPR 9
F L+P PR
Sbjct: 705 FQTLIPHPR 713
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 LVPEPRR 10
LVPEP +
Sbjct: 2211 LVPEPEK 2217
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LVPEPRR 10
L+PEPRR
Sbjct: 110 LLPEPRR 116
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LVPEPRR 10
L+PEPRR
Sbjct: 110 LLPEPRR 116
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2241 LIPEPEK 2247
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2241 LIPEPEK 2247
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2241 LIPEPEK 2247
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2233 LIPEPEK 2239
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPLVPEP 8
LP+V EP
Sbjct: 1795 LPMVEEP 1801
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2240 LIPEPEK 2246
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2235 LIPEPEK 2241
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPLVPEP 8
LP+V EP
Sbjct: 1797 LPMVEEP 1803
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LPLVPEP 8
+PL PEP
Sbjct: 602 VPLAPEP 608
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2211 LIPEPEK 2217
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2211 LIPEPEK 2217
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2211 LIPEPEK 2217
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LPLVPEP 8
+PL PEP
Sbjct: 602 VPLAPEP 608
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2234 LIPEPEK 2240
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2211 LIPEPEK 2217
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2211 LIPEPEK 2217
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2212 LIPEPEK 2218
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LPLVPEP 8
+PL PEP
Sbjct: 601 VPLAPEP 607
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2212 LIPEPEK 2218
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2209 LIPEPEK 2215
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2212 LIPEPEK 2218
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2212 LIPEPEK 2218
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPLVPEP 8
LP+V EP
Sbjct: 1797 LPIVEEP 1803
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2212 LIPEPEK 2218
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LPLVPEP 8
+PL PEP
Sbjct: 602 VPLAPEP 608
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 FLPLVPEPR 9
F L+P PR
Sbjct: 729 FQTLLPNPR 737
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2212 LIPEPEK 2218
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPLVPEP 8
LP+V EP
Sbjct: 1797 LPIVEEP 1803
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPLVPEP 8
LP+V EP
Sbjct: 1797 LPIVEEP 1803
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPLVPEP 8
LP+V EP
Sbjct: 1797 LPIVEEP 1803
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LPLVPEP 8
+PL PEP
Sbjct: 601 VPLAPEP 607
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 FLPLVPE 7
F+P +PE
Sbjct: 899 FMPTLPE 905
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 FLPLVPE 7
F+P +PE
Sbjct: 899 FMPTLPE 905
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 FLPLVPE 7
F+P +PE
Sbjct: 899 FMPTLPE 905
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 FLPLVPE 7
F+P +PE
Sbjct: 899 FMPTLPE 905
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPLVPEP 8
LP+V EP
Sbjct: 1631 LPIVEEP 1637
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPLVPEP 8
LP+V EP
Sbjct: 1797 LPIVEEP 1803
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2211 LIPEPEK 2217
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 FLPLVP 6
F PLVP
Sbjct: 3132 FTPLVP 3137
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 FLPLVP 6
F PLVP
Sbjct: 3132 FTPLVP 3137
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2211 LIPEPEK 2217
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 4 LVPEPR 9
LVPEPR
Sbjct: 177 LVPEPR 182
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 4 LVPEPR 9
LVPEPR
Sbjct: 177 LVPEPR 182
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LPLVPEP 8
+PL PEP
Sbjct: 602 VPLAPEP 608
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2211 LIPEPEK 2217
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 LVPEPRR 10
L+PEP +
Sbjct: 2211 LIPEPEK 2217
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPLVPEP 8
LP+V EP
Sbjct: 1798 LPIVDEP 1804
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPLVPEP 8
LP+V EP
Sbjct: 1798 LPIVDEP 1804
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 PLVPEPR 9
P VP+PR
Sbjct: 1837 PPVPKPR 1843
>sp|UL141_HCMVM|PROTEIN UL141|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FLPLVPEP 8
FLP+ P P
Sbjct: 257 FLPVTPAP 264
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 LPLVPE 7
LPL+P+
Sbjct: 95 LPLIPD 100
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 FLPLVPEPRR 10
F+P EP R
Sbjct: 574 FVPRADEPAR 583
>sp|YLR3_EBVP3|UNCHARACTERIZED protein BLRF3|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 1 FLPLVPEPRR 10
LPLV PR
Sbjct: 135 LLPLVSAPRH 144
109|Sequence|541|550|PEPRRLPVGP
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPCGP 274
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPCGP 274
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPCGP 274
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPNGP 274
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPNGP 274
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPNGP 274
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPNGP 274
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPEGP 274
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPNGP 274
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPGGP 274
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 258 PRPLRLPDGP 267
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 258 PRPLRLPDGP 267
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 261 PRPLRLPDGP 270
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 242 PRPLRLPDGP 251
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPNGP 274
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPIRLPDGP 274
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 1 PEPRRLPVGP 10
P P RLP GP
Sbjct: 265 PRPLRLPDGP 274
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 PEPRRLPVGP 10
P P +LP GP
Sbjct: 265 PRPLKLPDGP 274
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 PEPRRLPVGP 10
P P +LP GP
Sbjct: 265 PRPIKLPNGP 274
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 1 PEPRRLPVGP 10
P P +LP GP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 1 PEPRRLPVGP 10
P P +LP GP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 1 PEPRRLPVGP 10
P P +LP GP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 1 PEPRRLPVGP 10
P P +LP GP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 PEPRRLPVGP 10
P P +LP GP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 PEPRRLPVGP 10
P P +LP GP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 1 PEPRRLPVGP 10
P P +LP GP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 1 PEPRRLPVGP 10
P P +LP GP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 1 PEPRRLPVGP 10
P P +LP GP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 1 PEPRRLPVGP 10
P P +LP GP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 1 PEPRRLPVGP 10
P P +LP GP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 1 PEPRRLPVGP 10
P P +LP GP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 PEPRRLPVGP 10
P P +LP GP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 PEPRRLPVGP 10
P P +LP GP
Sbjct: 265 PRPIKLPDGP 274
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 PEPRRLPVGP 10
P P +LP GP
Sbjct: 265 PRPIKLPDGP 274
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 EPRRLPV 8
EPR+LP+
Sbjct: 135 EPRQLPI 141
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 2 EPRRLPV 8
EPR+LP+
Sbjct: 135 EPRQLPI 141
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 EPRRLPV 8
EPR+LP+
Sbjct: 135 EPRQLPI 141
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 EPRRLPV 8
EPR+LP+
Sbjct: 141 EPRQLPI 147
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 EPRRLPV 8
EPR+LP+
Sbjct: 137 EPRQLPI 143
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 2 EPRRLPV 8
EPR+LP+
Sbjct: 127 EPRQLPI 133
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 EPRRLPV 8
EPR+LP+
Sbjct: 127 EPRQLPI 133
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 2 EPRRLPV 8
EPR+LP+
Sbjct: 127 EPRQLPI 133
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 PEPRRLPVGP 10
P P R P GP
Sbjct: 265 PRPLRTPGGP 274
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PEPRRLPVG 9
P PRRLP G
Sbjct: 966 PAPRRLPQG 974
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PEPRRLPVG 9
P PRRLP G
Sbjct: 969 PAPRRLPQG 977
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PEPRRLPVG 9
P PRRLP G
Sbjct: 970 PAPRRLPQG 978
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 RRLPVGP 10
RRL +GP
Sbjct: 307 RRLSIGP 313
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 EPRRLPV 8
EP++LP+
Sbjct: 135 EPKQLPI 141
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 EPRRLPV 8
EP++LP+
Sbjct: 126 EPKQLPI 132
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 EPRRLPV 8
EP++LP+
Sbjct: 126 EPKQLPI 132
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 EPRRLPV 8
EP++LP+
Sbjct: 126 EPKQLPI 132
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 EPRRLPV 8
EP++LP+
Sbjct: 134 EPKQLPI 140
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 EPRRLPV 8
EP++LP+
Sbjct: 135 EPKQLPI 141
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 2 EPRRLPVGP 10
+PRR P P
Sbjct: 128 QPRRCPTRP 136
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 2 EPRRLPVGP 10
+PRR P P
Sbjct: 129 QPRRCPTRP 137
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 2 EPRRLPVGP 10
+PRR P P
Sbjct: 129 QPRRCPTRP 137
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 PEPRRLPVGP 10
PE +LP+ P
Sbjct: 2458 PEEEKLPINP 2467
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 2 EPRRLPVGP 10
+PRR P P
Sbjct: 129 QPRRCPTRP 137
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 PEPRRLPV 8
PE R LPV
Sbjct: 220 PESRFLPV 227
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PEPRRLPVG 9
P P P+G
Sbjct: 80 PNPHEFPLG 88
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 PEPRRLPVGP 10
PE +LP+ P
Sbjct: 2458 PEEEKLPINP 2467
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 1 PEPRRLPV 8
PE R LPV
Sbjct: 220 PESRFLPV 227
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 1 PEPRRLPV 8
PE R LPV
Sbjct: 220 PESRFLPV 227
>sp|NEP_INCHY|NUCLEAR export protein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 EPRRLPVG 9
EP +P+G
Sbjct: 113 EPNSIPIG 120
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 PEPRRLPV 8
PE R LPV
Sbjct: 220 PESRFLPV 227
>sp|NEP_INCYA|NUCLEAR export protein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 EPRRLPVG 9
EP +P+G
Sbjct: 108 EPSSIPIG 115
>sp|NEP_INCY6|NUCLEAR export protein|Influenza C virus (strain C/Yamagata/1964)
Query: 2 EPRRLPVG 9
EP +P+G
Sbjct: 113 EPSSIPIG 120
>sp|NEP_INCTA|NUCLEAR export protein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 EPRRLPVG 9
EP +P+G
Sbjct: 108 EPSSIPIG 115
>sp|NEP_INCMI|NUCLEAR export protein|Influenza C virus (strain C/Mississippi/1980)
Query: 2 EPRRLPVG 9
EP +P+G
Sbjct: 108 EPSSIPIG 115
>sp|NEP_INCJJ|NUCLEAR export protein|Influenza C virus (strain C/JJ/1950)
Query: 2 EPRRLPVG 9
EP +P+G
Sbjct: 113 EPSSIPIG 120
>sp|NEP_INCJH|NUCLEAR export protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 EPRRLPVG 9
EP +P+G
Sbjct: 108 EPSSIPIG 115
>sp|NEP_INCCA|NUCLEAR export protein|Influenza C virus (strain C/California/1978)
Query: 2 EPRRLPVG 9
EP +P+G
Sbjct: 113 EPSSIPIG 120
>sp|NEP_INCAA|NUCLEAR export protein|Influenza C virus (strain C/Ann
Query: 2 EPRRLPVG 9
EP +P+G
Sbjct: 113 EPSSIPIG 120
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 PRRLPV 8
P+RLPV
Sbjct: 895 PQRLPV 900
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 PRRLPV 8
P+RLPV
Sbjct: 895 PQRLPV 900
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 PRRLPV 8
P+RLPV
Sbjct: 891 PQRLPV 896
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 2 EPRRLPVGP 10
+PRR P P
Sbjct: 124 QPRRCPTRP 132
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 2 EPRRLPVG 9
EPRR+ VG
Sbjct: 371 EPRRVSVG 378
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 2 EPRRLPVG 9
EPRR+ VG
Sbjct: 371 EPRRVSVG 378
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 2 EPRRLPVGP 10
+PRR P P
Sbjct: 124 QPRRCPTRP 132
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PEPRRLPVGP 10
PE +LP+ P
Sbjct: 2458 PEEEKLPISP 2467
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PEPRRLPVGP 10
PE +LP+ P
Sbjct: 2458 PEEEKLPINP 2467
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 PEPRRLPVGP 10
PE +LP+ P
Sbjct: 2462 PEEEKLPINP 2471
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 PEPRRLPVGP 10
PE +LP+ P
Sbjct: 2458 PEEEKLPINP 2467
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 PEPRRLPVG 9
P PR P G
Sbjct: 1511 PAPRTYPKG 1519
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 3 PRRLPVGP 10
P R PVGP
Sbjct: 204 PSRSPVGP 211
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 3 PRRLPVGP 10
P R PVGP
Sbjct: 204 PSRSPVGP 211
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 1 PEPRRLPVG 9
P PRR PV
Sbjct: 488 PTPRRAPVS 496
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 3 PRRLPV 8
PRR+PV
Sbjct: 469 PRRVPV 474
Query: 3 PRRLPVGP 10
PRR P P
Sbjct: 1039 PRRAPTRP 1046
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 3 PRRLPV 8
PRR+PV
Sbjct: 469 PRRVPV 474
Query: 3 PRRLPVGP 10
PRR P P
Sbjct: 1039 PRRAPTRP 1046
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 5 RLPVGP 10
RLP GP
Sbjct: 250 RLPKGP 255
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 5 RLPVGP 10
RLP GP
Sbjct: 250 RLPKGP 255
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 5 RLPVGP 10
RLP GP
Sbjct: 250 RLPKGP 255
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 1 PEPRRLPVGP 10
PE ++L V P
Sbjct: 151 PESQKLDVSP 160
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 1 PEPRRLPVGP 10
PE ++L V P
Sbjct: 151 PESQKLDVSP 160
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 3 PRRLPVGP 10
PRR P+GP
Sbjct: 442 PRRPPLGP 449
110|Sequence|546|555|LPVGPLLRAL
>sp|PG034_VAR67|PROTEIN OPG034|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LPVGPLLRAL 10
+P+GPL + +
Sbjct: 121 IPLGPLFKKI 130
>sp|PG034_VACCC|PROTEIN OPG034|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LPVGPLLRAL 10
+P+GPL + +
Sbjct: 131 IPLGPLFKKI 140
>sp|PG034_MONPV|PROTEIN OPG034|Monkeypox virus (MPXV)
Query: 1 LPVGPLLRAL 10
+P+GPL + +
Sbjct: 121 IPLGPLFKKI 130
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 2 PVGPLLR 8
P+G LLR
Sbjct: 135 PIGKLLR 141
>sp|VE8E2_HPV18|PROTEIN E8^E2C|Human papillomavirus type 18
Query: 2 PVGPLLRA 9
PV PLL A
Sbjct: 68 PVNPLLGA 75
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 2 PVGPLLRA 9
PV PLL A
Sbjct: 262 PVNPLLGA 269
>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 LPVGPLL 7
+PVGP+
Sbjct: 355 IPVGPVF 361
>sp|VP6_ROTHS|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 LPVGPLL 7
+PVGP+
Sbjct: 355 IPVGPVF 361
>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 LPVGPLL 7
+PVGP+
Sbjct: 355 IPVGPVF 361
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 LPVGPLL 7
+PVGP+
Sbjct: 355 IPVGPVF 361
>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 LPVGPLL 7
+PVGP+
Sbjct: 355 IPVGPVF 361
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 1 LPVGPLL 7
+PVGP+
Sbjct: 355 IPVGPVF 361
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 LPVGPLL 7
+PVGP+
Sbjct: 355 IPVGPVF 361
>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 LPVGPLL 7
+PVGP+
Sbjct: 355 IPVGPVF 361
>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 LPVGPLL 7
+PVGP+
Sbjct: 355 IPVGPVF 361
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 LPVGPLL 7
+PVGP+
Sbjct: 355 IPVGPVF 361
>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 1 LPVGPLL 7
+PVGP+
Sbjct: 355 IPVGPVF 361
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 LPVGPLL 7
+PVGP+
Sbjct: 355 IPVGPVF 361
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 LPVGPLL 7
+PVGP+
Sbjct: 355 IPVGPVF 361
>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 LPVGPLL 7
+PVGP+
Sbjct: 355 IPVGPVF 361
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 LPVGPLL 7
+PVGP+
Sbjct: 355 IPVGPVF 361
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LPVGPLL 7
LPV P+L
Sbjct: 433 LPVNPVL 439
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LPVGPLL 7
LPV P+L
Sbjct: 433 LPVNPVL 439
>sp|NCAP_SFTSV|NUCLEOPROTEIN phlebovirus (isolate SFTSV/Human/China/HB29/2010) (Severe
Query: 1 LPVGPLLRAL 10
LPVGP + L
Sbjct: 126 LPVGPAVMNL 135
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 4 GPLLRAL 10
GP+LR L
Sbjct: 610 GPILRLL 616
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 PVGPLLRAL 10
PVG + RAL
Sbjct: 143 PVGSVARAL 151
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 LPVGPLLRAL 10
LP+ PL AL
Sbjct: 2443 LPISPLSNAL 2452
>sp|TRX1_EBVB9|TRIPLEX capsid protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PVGPLLRAL 10
PVGPL+ +
Sbjct: 187 PVGPLVENI 195
111|Sequence|551|560|LLRALATCHA
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LRALATCH 9
LRA+ CH
Sbjct: 242 LRAMVQCH 249
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 LLRALATCHA 10
LLR+L+ C+A
Sbjct: 377 LLRSLSFCNA 386
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LLRALATCHA 10
LLR+L+ C+A
Sbjct: 377 LLRSLSFCNA 386
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 LRALATCHA 10
++ALA+C A
Sbjct: 2720 IKALASCRA 2728
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LRALATC 8
LRALA C
Sbjct: 146 LRALAGC 152
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LRALATC 8
LRALA C
Sbjct: 146 LRALAGC 152
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 LRALATC 8
LRA+ TC
Sbjct: 976 LRAVKTC 982
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 LRALATCHA 10
++ALA C A
Sbjct: 2739 IKALAACKA 2747
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 LRALATCHA 10
++ALA+C A
Sbjct: 2720 IKALASCRA 2728
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 LRALATCHA 10
LRA T HA
Sbjct: 2215 LRATCTAHA 2223
Query: 2 LRALATCHA 10
++ALA C A
Sbjct: 2739 VKALAACKA 2747
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 LRALATCHA 10
++ALA C A
Sbjct: 2739 IKALAACKA 2747
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 LRALATCHA 10
LRA T HA
Sbjct: 2215 LRATCTTHA 2223
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 LRALATCHA 10
++ALA C A
Sbjct: 2739 VKALAACKA 2747
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 LRALATCHA 10
++ALA C A
Sbjct: 2739 VKALAACKA 2747
112|Sequence|556|565|ATCHALSRLQ
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 TCHALSR 8
T HALSR
Sbjct: 97 TVHALSR 103
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 TCHALSR 8
T HALSR
Sbjct: 97 TVHALSR 103
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 TCHALSR 8
T HALSR
Sbjct: 97 TVHALSR 103
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 ATCHALSRL 9
+TC LSR+
Sbjct: 101 STCCVLSRI 109
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 ATCHALSRL 9
+TC LSR+
Sbjct: 101 STCCVLSRI 109
113|Sequence|561|570|LSRLQDTPVG
>sp|UL10_HCMVA|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LSRLQDTP 8
LSRL+ TP
Sbjct: 157 LSRLKTTP 164
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 LQDTPV 9
LQ+TPV
Sbjct: 1048 LQETPV 1053
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 LQDTPV 9
LQ+TPV
Sbjct: 1048 LQETPV 1053
>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)
Query: 1 LSRLQDTPVG 10
LSR+ D P G
Sbjct: 232 LSRITDPPGG 241
>sp|VE2_HPV1|REGULATORY protein E2|Human papillomavirus type 1 (Human
Query: 1 LSRLQDTPVG 10
L L+D+P G
Sbjct: 79 LESLKDSPYG 88
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 SRLQDTP 8
SRL +TP
Sbjct: 1709 SRLDETP 1715
>sp|SF33K_ADE41|PROTEIN 33K|Human adenovirus F serotype 41
Query: 5 QDTPVG 10
QDTPV
Sbjct: 143 QDTPVA 148
114|Sequence|566|575|DTPVGDPMDL
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 DTPVGDPMD 9
+ P+GDP D
Sbjct: 211 EIPLGDPRD 219
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 DTPVGDPMD 9
+ P+GDP D
Sbjct: 211 EIPLGDPRD 219
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 DTPVGDPMD 9
+ P+GDP D
Sbjct: 211 ELPLGDPRD 219
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 1 DTPVGDPM 8
DTP G+P+
Sbjct: 283 DTPCGNPI 290
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 DTPVGDPMDL 10
D P DP++L
Sbjct: 1611 DIPGADPIEL 1620
>sp|REV_HV2UC|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 DTPVGDPMDL 10
D+P +P+DL
Sbjct: 60 DSPTEEPLDL 69
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 1 DTPVGDP 7
D PV DP
Sbjct: 518 DQPVEDP 524
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 2 TPVGDP 7
TP+G+P
Sbjct: 158 TPLGNP 163
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 TPVGDPMD 9
TP PMD
Sbjct: 454 TPTAPPMD 461
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 5 GDPMDL 10
G PMDL
Sbjct: 1660 GQPMDL 1665
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 TPVGDPM 8
TP+ PM
Sbjct: 1603 TPISSPM 1609
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 3 PVGDPM 8
PVG+P+
Sbjct: 162 PVGEPL 167
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 1 DTPVGD 6
D PVGD
Sbjct: 55 DRPVGD 60
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DTPVGDPMD 9
D P G P D
Sbjct: 46 DGPPGSPTD 54
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DTPVGDPMD 9
D P G P D
Sbjct: 46 DGPPGSPTD 54
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TPVGDPMDL 10
TP G MD+
Sbjct: 3073 TPTGTVMDI 3081
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TPVGDPMDL 10
TP G MD+
Sbjct: 3073 TPTGTVMDI 3081
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 5 GDPMDL 10
G PMDL
Sbjct: 1592 GKPMDL 1597
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 5 GDPMDL 10
G PMDL
Sbjct: 1600 GKPMDL 1605
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 5 GDPMDL 10
G PMDL
Sbjct: 1591 GKPMDL 1596
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 3 PVGDPMDL 10
P G P+D+
Sbjct: 468 PTGTPLDI 475
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 3 PVGDPMDL 10
P G P+D+
Sbjct: 468 PTGTPLDI 475
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 3 PVGDPMDL 10
P G P+D+
Sbjct: 468 PTGTPLDI 475
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 3 PVGDPMDL 10
P G P+D+
Sbjct: 468 PTGTPLDI 475
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 3 PVGDPMDL 10
P G P+D+
Sbjct: 468 PTGTPLDI 475
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 3 PVGDPMDL 10
P G P+D+
Sbjct: 468 PTGTPLDI 475
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 1 DTPVGD 6
D PVGD
Sbjct: 58 DRPVGD 63
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 3 PVGDPMDL 10
P G P+D+
Sbjct: 468 PTGTPLDI 475
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 1 DTPVGD 6
D P+GD
Sbjct: 57 DRPIGD 62
115|Sequence|571|580|DPMDLKMVES
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 PMDLKMVE 9
P+DL M+E
Sbjct: 6750 PIDLTMIE 6757
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 1 DPMDLKMVES 10
DP+DL+ + S
Sbjct: 276 DPVDLETIRS 285
>sp|UNG_EBVB9|URACIL-DNA glycosylase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DPMDLKMV 8
DP D+K+V
Sbjct: 79 DPSDIKVV 86
>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P
Query: 1 DPMDLKMV 8
DP D+K+V
Sbjct: 76 DPEDIKVV 83
>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 DPMDLKM 7
+PMD+K+
Sbjct: 166 NPMDVKL 172
116|Sequence|576|585|KMVESTGWVL
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 3 VESTGWVL 10
VES GW L
Sbjct: 762 VESMGWAL 769
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 VESTGWVL 10
VES GW L
Sbjct: 762 VESMGWAL 769
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 VESTGWVL 10
VES GW L
Sbjct: 762 VESMGWAL 769
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 3 VESTGWVL 10
VES GW L
Sbjct: 762 VESMGWAL 769
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 ESTGWV 9
E+TGW+
Sbjct: 13 ETTGWI 18
>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 ESTGWV 9
E+TGW+
Sbjct: 13 ETTGWI 18
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 KMVESTGWVL 10
KMV S GW L
Sbjct: 2625 KMVTSLGWNL 2634
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 KMVESTGWVL 10
KMV S GW L
Sbjct: 2625 KMVTSLGWNL 2634
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 KMVESTGWVL 10
KMV S GW L
Sbjct: 2624 KMVTSLGWNL 2633
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 KMVESTGWVL 10
KMV S GW L
Sbjct: 2625 KMVTSLGWNL 2634
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 KMVESTGWVL 10
KMV S GW L
Sbjct: 2625 KMVTSLGWNL 2634
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 KMVESTGW 8
+MV+S GW
Sbjct: 2638 RMVQSYGW 2645
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 MVESTGWVL 10
+V+ST W L
Sbjct: 3571 LVQSTQWSL 3579
>sp|YVBH_VACCC|UNCHARACTERIZED 7.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 STGWV 9
STGWV
Sbjct: 5 STGWV 9
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 MVESTGWVL 10
+V+ST W L
Sbjct: 3571 LVQSTQWSL 3579
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 KMVESTGWVL 10
+MV S GW L
Sbjct: 2625 RMVTSLGWNL 2634
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 KMVESTGWVL 10
+MV S GW L
Sbjct: 2625 RMVTSLGWNL 2634
>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)
Query: 2 MVESTGWVL 10
+V +TGW L
Sbjct: 82 IVSATGWPL 90
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 STGWVL 10
+TGW+L
Sbjct: 638 ATGWLL 643
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 STGWVL 10
+TGW+L
Sbjct: 638 ATGWLL 643
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 STGWVL 10
+TGW+L
Sbjct: 638 ATGWLL 643
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 VESTGWVL 10
V S+GW L
Sbjct: 318 VNSSGWQL 325
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 5 STGWVL 10
+TGW+L
Sbjct: 638 ATGWLL 643
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 5 STGWVL 10
+TGW+L
Sbjct: 638 ATGWLL 643
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 5 STGWVL 10
+TGW+L
Sbjct: 638 ATGWLL 643
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 ESTGWVL 10
E TGW L
Sbjct: 634 EETGWGL 640
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 ESTGWVL 10
E TGW L
Sbjct: 634 EGTGWGL 640
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 ESTGWVL 10
E TGW L
Sbjct: 634 EGTGWGL 640
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 ESTGWVL 10
E TGW L
Sbjct: 634 EGTGWGL 640
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 4 ESTGWV 9
EST WV
Sbjct: 44 ESTRWV 49
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 ESTGWVL 10
E TGW L
Sbjct: 634 EGTGWGL 640
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 VESTGWVL 10
V+ST W L
Sbjct: 3595 VQSTQWSL 3602
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 VESTGWVL 10
V+ST W L
Sbjct: 3595 VQSTQWSL 3602
117|Sequence|581|590|TGWVLEEEPA
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 TGWVLEEE 8
+ WV+EEE
Sbjct: 832 SDWVIEEE 839
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 3 WVLEEE 8
WV+EEE
Sbjct: 833 WVVEEE 838
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 GWVLEEEP 9
GW++ E P
Sbjct: 1481 GWIIPETP 1488
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 GWVLEEEP 9
GW++ E P
Sbjct: 1481 GWIIPETP 1488
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 GWVLEEEP 9
GW++ E P
Sbjct: 1481 GWIIPETP 1488
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 GWVLEEEP 9
GW++ E P
Sbjct: 1481 GWIIPETP 1488
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 GWVLEEEP 9
GW++ E P
Sbjct: 1481 GWIIPETP 1488
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 3 WVLEEE 8
W++EEE
Sbjct: 842 WIVEEE 847
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 2 GWVLEEE 8
GW+LE++
Sbjct: 296 GWLLEDD 302
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 WVLEEE 8
WV EEE
Sbjct: 1019 WVYEEE 1024
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 WVLEEE 8
WV EEE
Sbjct: 1026 WVYEEE 1031
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 1 TGWVLEEE 8
T W+LE E
Sbjct: 131 TVWILESE 138
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 2 GWVLEEEP 9
GW L EP
Sbjct: 37 GWPLYREP 44
>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GWVLEEEP 9
GW+ EP
Sbjct: 137 GWLYSSEP 144
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 WVLEEEPA 10
W + +EPA
Sbjct: 599 WTMADEPA 606
>sp|VE7_HPV38|PROTEIN E7|Human papillomavirus 38
Query: 4 VLEEEPA 10
V+EEEPA
Sbjct: 39 VVEEEPA 45
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 3 WVLEEE 8
WV++EE
Sbjct: 1227 WVVQEE 1232
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 WVLEEE 8
WV++EE
Sbjct: 1227 WVVQEE 1232
118|Sequence|586|595|EEEPAADSAF
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 EEEPAADSAF 10
E EP AD+AF
Sbjct: 285 EVEPRADTAF 294
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 4 PAADSAF 10
PAA SAF
Sbjct: 1831 PAASSAF 1837
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 2 EEPAADSAF 10
EEP ADS
Sbjct: 299 EEPRADSGL 307
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 2 EEPAADSAF 10
EEP ADS
Sbjct: 299 EEPRADSGL 307
119|Sequence|591|600|ADSAFGTQVL
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 DSAFGTQVL 10
+S FGTQ++
Sbjct: 1518 NSVFGTQLI 1526
>sp|VCYCL_HHV8P|VIRAL cyclin homolog|Human herpesvirus 8 type P
Query: 1 ADSAFGT 7
+DS FGT
Sbjct: 35 SDSVFGT 41
120|Sequence|596|605|GTQVLAVMRP
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 TQVLAVMRP 10
+QVL+++RP
Sbjct: 310 SQVLSLIRP 318
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 QVLAVMRP 10
QVL VM P
Sbjct: 128 QVLPVMHP 135
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 QVLAVMRP 10
QVL VM P
Sbjct: 128 QVLPVMHP 135
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 QVLAVMRP 10
QVL VM P
Sbjct: 128 QVLPVMHP 135
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 QVLAVMRP 10
QVL VM P
Sbjct: 128 QVLPVMHP 135
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 QVLAVMRP 10
QVL VM P
Sbjct: 128 QVLPVMHP 135
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 QVLAVMRP 10
QVL VM P
Sbjct: 128 QVLPVMHP 135
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 QVLAVMRP 10
QVL VM P
Sbjct: 128 QVLPVMHP 135
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 QVLAVMRP 10
QVL VM P
Sbjct: 128 QVLPVMHP 135
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 QVLAVMRP 10
QVL VM P
Sbjct: 128 QVLPVMHP 135
>sp|CORE5_ADE12|CORE-CAPSID bridging protein|Human adenovirus A serotype 12
Query: 1 GTQVLAVMRP 10
G QV ++RP
Sbjct: 70 GRQVKRILRP 79
121|Sequence|601|610|AVMRPPLWEP
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 5 PPLWE 9
PP+WE
Sbjct: 171 PPMWE 175
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 PPLWE 9
PP+WE
Sbjct: 171 PPMWE 175
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PPLWE 9
PP+WE
Sbjct: 171 PPMWE 175
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 VMRPPLWEP 10
+ RP W+P
Sbjct: 1828 IFRPICWDP 1836
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 2 VMRPPLW 8
V+ PPLW
Sbjct: 256 VLWPPLW 262
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 5 PPLWEP 10
PP W P
Sbjct: 360 PPYWYP 365
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 VMRPPLWE 9
++RP LW+
Sbjct: 1671 LLRPLLWD 1678
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 1 AVMRPP 6
VMRPP
Sbjct: 7 GVMRPP 12
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 RPPLW 8
RPPLW
Sbjct: 86 RPPLW 90
>sp|UL39_HCMVA|UNCHARACTERIZED protein UL39|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VMRPPLWEP 10
++ PP W P
Sbjct: 20 LLTPPPWYP 28
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RPPLW 8
RPPLW
Sbjct: 86 RPPLW 90
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 5 PPLWE 9
PP+W+
Sbjct: 60 PPIWK 64
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 PPLWE 9
PP WE
Sbjct: 240 PPRWE 244
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PPLWE 9
PP WE
Sbjct: 240 PPRWE 244
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 AVMRPPLW 8
A+ R PLW
Sbjct: 113 AIYRAPLW 120
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 AVMRPPLW 8
A+ R PLW
Sbjct: 182 AIYRAPLW 189
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 AVMRPPLW 8
A+ R PLW
Sbjct: 182 AIYRAPLW 189
>sp|VP6_ROTHS|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 VMRPPLWEP 10
+MRPP P
Sbjct: 294 LMRPPNMTP 302
>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 VMRPPLWEP 10
+MRPP P
Sbjct: 294 LMRPPNMTP 302
>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 VMRPPLWEP 10
+MRPP P
Sbjct: 294 LMRPPNMTP 302
>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 2 VMRPPLWEP 10
+MRPP P
Sbjct: 294 LMRPPNMTP 302
>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 2 VMRPPLWEP 10
+MRPP P
Sbjct: 294 LMRPPNMTP 302
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 2 VMRPPLWEP 10
+MRPP P
Sbjct: 294 LMRPPNMTP 302
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 VMRPPLWEP 10
+MRPP P
Sbjct: 294 LMRPPNMTP 302
>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 VMRPPLWEP 10
+MRPP P
Sbjct: 294 LMRPPNMTP 302
>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 2 VMRPPLWEP 10
+MRPP P
Sbjct: 294 LMRPPNMTP 302
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 2 VMRPPLWEP 10
+MRPP P
Sbjct: 294 LMRPPNMTP 302
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 VMRPPLWEP 10
+MRPP P
Sbjct: 294 LMRPPNMTP 302
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 VMRPPLWEP 10
+MRPP P
Sbjct: 294 LMRPPNMTP 302
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 VMRPPLWEP 10
+MRPP P
Sbjct: 294 LMRPPNMTP 302
>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 VMRPPLWEP 10
+MRPP P
Sbjct: 294 LMRPPNMTP 302
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 AVMRPPLWE 9
AV+RP W+
Sbjct: 1195 AVLRPADWD 1203
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 VMRPPLWEP 10
+MRPP P
Sbjct: 294 LMRPPNMTP 302
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 5 PPLW 8
PPLW
Sbjct: 516 PPLW 519
>sp|BLLF2_EBVB9|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VMRPPLWEP 10
MRPP++ P
Sbjct: 101 TMRPPIYLP 109
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 2 VMRPPLW 8
V+ PPLW
Sbjct: 256 VLCPPLW 262
>sp|E311_ADE05|EARLY E3A 10.5 kDa glycoprotein|Human adenovirus C serotype 5
Query: 4 RPPLWEP 10
RPP++ P
Sbjct: 61 RPPIYSP 67
>sp|BLLF2_EBVA8|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VMRPPLWEP 10
MRPP++ P
Sbjct: 101 TMRPPIYLP 109
>sp|BLLF2_EBVG|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VMRPPLWEP 10
MRPP++ P
Sbjct: 101 TMRPPIYLP 109
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 PPLW 8
PP+W
Sbjct: 63 PPIW 66
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 PPLW 8
PP+W
Sbjct: 63 PPIW 66
122|Sequence|606|615|PLWEPQLQAM
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 1 PLWEP 5
PLWEP
Sbjct: 174 PLWEP 178
>sp|TRX1_HHV7J|TRIPLEX capsid protein 1|Human herpesvirus 7 (strain JI)
Query: 1 PLWEPQLQAM 10
P WEP+ A+
Sbjct: 170 PDWEPRQNAI 179
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 2 LWEPQLQAM 10
LW +LQA+
Sbjct: 375 LWPQELQAL 383
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LWEPQLQAM 10
LW +LQA+
Sbjct: 375 LWPQELQAL 383
>sp|TRX1_HHV6Z|TRIPLEX capsid protein 1|Human herpesvirus 6B (strain Z29)
Query: 1 PLWEPQ 6
P WEP+
Sbjct: 183 PDWEPR 188
>sp|TRX1_HHV6U|TRIPLEX capsid protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PLWEPQ 6
P WEP+
Sbjct: 183 PDWEPR 188
>sp|TRX1_HHV6H|TRIPLEX capsid protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 1 PLWEPQ 6
P WEP+
Sbjct: 183 PDWEPR 188
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 LWEPQL 7
LW PQL
Sbjct: 431 LWLPQL 436
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 1 PLWEPQL 7
P+W P+L
Sbjct: 417 PVWAPEL 423
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PLWEP 5
P WEP
Sbjct: 3180 PQWEP 3184
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PLWEP 5
P WEP
Sbjct: 3180 PQWEP 3184
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PLWEP 5
P WEP
Sbjct: 3180 PQWEP 3184
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PLWEP 5
P WEP
Sbjct: 3184 PQWEP 3188
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PLWEP 5
P WEP
Sbjct: 3183 PQWEP 3187
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PLWEP 5
P WEP
Sbjct: 3180 PQWEP 3184
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PLWEP 5
P WEP
Sbjct: 3184 PQWEP 3188
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PLWEP 5
P WEP
Sbjct: 3180 PQWEP 3184
123|Sequence|611|620|QLQAMEEPPV
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QAMEEPPV 10
QAM PP+
Sbjct: 432 QAMYAPPI 439
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 3 QAMEEPPV 10
QAM PP+
Sbjct: 426 QAMYAPPI 433
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QAMEEPPV 10
QAM PP+
Sbjct: 437 QAMYAPPI 444
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QAMEEPPV 10
QAM PP+
Sbjct: 427 QAMYAPPI 434
>sp|VL2_HPV37|MINOR capsid protein L2|Human papillomavirus 37
Query: 2 LQAMEEPP 9
L+A+EEPP
Sbjct: 316 LEAVEEPP 323
>sp|VL2_HPV17|MINOR capsid protein L2|Human papillomavirus 17
Query: 2 LQAMEEPP 9
++A+EEPP
Sbjct: 316 IEAVEEPP 323
124|Sequence|616|625|EEPPVPVSVL
>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19
Query: 2 EPPVPVSV 9
EPP+P ++
Sbjct: 25 EPPLPATI 32
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 PPVPVSVL 10
PP+P+S L
Sbjct: 75 PPIPMSRL 82
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PPVPVSVL 10
PP+P+S L
Sbjct: 75 PPIPMSRL 82
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PPVPVSVL 10
PP+P+S L
Sbjct: 75 PPIPMSRL 82
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 3 PPVPVSVL 10
PP+P+S L
Sbjct: 74 PPIPMSRL 81
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 PPVPVSVL 10
PP+P+S L
Sbjct: 75 PPIPMSRL 82
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 EEPPVPV 7
E PPVP+
Sbjct: 50 ELPPVPI 56
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 3 PPVPVS 8
PPVPVS
Sbjct: 40 PPVPVS 45
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 3 PPVPVS 8
PPVPVS
Sbjct: 40 PPVPVS 45
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 EEPPVPVS 8
E PPVP++
Sbjct: 45 ELPPVPLA 52
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 3 PPVPVS 8
PPVPVS
Sbjct: 43 PPVPVS 48
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 3 PPVPVS 8
PPVPVS
Sbjct: 14 PPVPVS 19
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 EEPPVPVS 8
E PPVP++
Sbjct: 45 ELPPVPLA 52
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 3 PPVPVS 8
PPVPVS
Sbjct: 14 PPVPVS 19
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 3 PPVPVS 8
PPVPVS
Sbjct: 14 PPVPVS 19
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 3 PPVPVS 8
PP PVS
Sbjct: 30 PPTPVS 35
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 3 PPVPVS 8
PP PVS
Sbjct: 14 PPTPVS 19
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PPVPV
Sbjct: 252 PPVPV 256
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 3 PPVPVS 8
PP PVS
Sbjct: 14 PPTPVS 19
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 3 PPVPVS 8
PP PVS
Sbjct: 42 PPTPVS 47
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 EEPPVPVSVL 10
E P V VSVL
Sbjct: 1140 ENPRVSVSVL 1149
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 3 PPVPVS 8
PP PVS
Sbjct: 14 PPTPVS 19
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 3 PPVPVS 8
PP PVS
Sbjct: 123 PPTPVS 128
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PPVPV
Sbjct: 254 PPVPV 258
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PPVPV
Sbjct: 250 PPVPV 254
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 4 PVPVSV 9
P+PVSV
Sbjct: 721 PIPVSV 726
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PPVPV
Sbjct: 256 PPVPV 260
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PPVPV
Sbjct: 250 PPVPV 254
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 3 PPVPVS 8
PP PVS
Sbjct: 14 PPAPVS 19
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PPVPV
Sbjct: 250 PPVPV 254
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 3 PPVPVS 8
PP PVS
Sbjct: 12 PPTPVS 17
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 3 PPVPVS 8
PP PVS
Sbjct: 30 PPTPVS 35
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PPVPV
Sbjct: 252 PPVPV 256
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 EEPPVPVS 8
E+PP+PV
Sbjct: 2579 EDPPLPVG 2586
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 3 PPVPVS 8
PP PVS
Sbjct: 14 PPTPVS 19
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 EEPPVPVS 8
E+PP+PV
Sbjct: 2557 EDPPLPVG 2564
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PPVPV
Sbjct: 252 PPVPV 256
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 EEPPVPVS 8
E+PP+PV
Sbjct: 2552 EDPPLPVG 2559
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PPVPV
Sbjct: 250 PPVPV 254
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 254 PPIPV 258
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EPPVPVS 8
E PVP+S
Sbjct: 2601 EEPVPMS 2607
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EPPVPVS 8
E PVP+S
Sbjct: 2601 EEPVPMS 2607
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EPPVPVS 8
E PVP+S
Sbjct: 2601 EEPVPMS 2607
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 3 PPVPVS 8
PP PVS
Sbjct: 13 PPAPVS 18
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 254 PPIPV 258
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 254 PPIPV 258
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EPPVPVS 8
E PVP+S
Sbjct: 2601 EEPVPMS 2607
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EPPVPVS 8
E PVP+S
Sbjct: 2601 EEPVPMS 2607
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 257 PPIPV 261
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 3 PPVPVS 8
PP PVS
Sbjct: 14 PPTPVS 19
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 3 PPVPVS 8
PP PVS
Sbjct: 49 PPTPVS 54
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 254 PPIPV 258
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PPVPV
Sbjct: 256 PPVPV 260
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 254 PPIPV 258
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 250 PPIPV 254
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 254 PPIPV 258
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 260 PPIPV 264
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 254 PPIPV 258
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 254 PPIPV 258
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 254 PPIPV 258
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 256 PPIPV 260
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 EPPVP 6
EPP+P
Sbjct: 724 EPPIP 728
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PPVPV
Sbjct: 250 PPVPV 254
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPVPVSV 9
PP+PV +
Sbjct: 200 PPLPVLI 206
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPVPVSV 9
PP+PV +
Sbjct: 200 PPLPVLI 206
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 254 PPIPV 258
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 254 PPIPV 258
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 254 PPIPV 258
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 EEPPVPV 7
E PP PV
Sbjct: 1460 ETPPPPV 1466
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PPVPV
Sbjct: 254 PPVPV 258
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 254 PPIPV 258
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 260 PPIPV 264
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 250 PPIPV 254
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 3 PPVPVS 8
PP PVS
Sbjct: 42 PPTPVS 47
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PPVPV
Sbjct: 250 PPVPV 254
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 255 PPIPV 259
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 254 PPIPV 258
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 251 PPIPV 255
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 3 PPVPVS 8
PP PVS
Sbjct: 14 PPAPVS 19
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 3 PPVPVS 8
PP PVS
Sbjct: 21 PPTPVS 26
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 3 PPVPVS 8
PP PVS
Sbjct: 14 PPTPVS 19
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PPVPV
Sbjct: 250 PPVPV 254
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 254 PPIPV 258
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 254 PPIPV 258
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 257 PPIPV 261
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 EEPPVPVSVL 10
E P V +SVL
Sbjct: 1141 ENPRVSISVL 1150
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PPVPV
Sbjct: 252 PPVPV 256
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PPVPV 7
PP+PV
Sbjct: 256 PPIPV 260
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 3 PPVPVS 8
PP PVS
Sbjct: 14 PPTPVS 19
125|Sequence|621|630|PVSVLHRFPF
>sp|PG082_MONPV|TELOMERE-BINDING protein OPG082|Monkeypox virus (MPXV)
Query: 1 PVSVLHRFPF 10
P+S++ FPF
Sbjct: 160 PISIISFFPF 169
>sp|PG082_VARV|TELOMERE-BINDING protein OPG082|Variola virus
Query: 1 PVSVLHRFPF 10
P+S++ FPF
Sbjct: 160 PMSIISFFPF 169
>sp|PG082_VAR67|TELOMERE-BINDING protein OPG082|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PVSVLHRFPF 10
P+S++ FPF
Sbjct: 160 PMSIISFFPF 169
>sp|PG082_VACCC|TELOMERE-BINDING protein OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PVSVLHRFPF 10
P+S++ FPF
Sbjct: 160 PMSIISFFPF 169
>sp|IR02_HCMVA|UNCHARACTERIZED protein IRL2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VSVLHRFPF 10
++LHR+P
Sbjct: 20 ATLLHRYPI 28
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 4 VLHRFP 9
VLHR P
Sbjct: 451 VLHRIP 456
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 1 PVSVLH 6
PV VLH
Sbjct: 628 PVGVLH 633
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 PVSVLHRFP 9
PV +L R P
Sbjct: 687 PVKLLRRVP 695
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 SVLHRFPF 10
++L+RFP
Sbjct: 91 AILYRFPL 98
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 1 PVSVLHRFP 9
PV +L R P
Sbjct: 687 PVKLLRRVP 695
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 PVSVLHRFP 9
PV +L R P
Sbjct: 687 PVKLLRRVP 695
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 PVSVLHRFP 9
PV +L R P
Sbjct: 687 PVKLLRRVP 695
>sp|YLR3_EBVP3|UNCHARACTERIZED protein BLRF3|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 3 SVLHRFPF 10
++L+RFP
Sbjct: 91 AILYRFPL 98
126|Sequence|626|635|HRFPFSSALQ
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 1 HRFPFSS 7
H+FPF S
Sbjct: 543 HKFPFDS 549
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 HRFPFSSAL 9
HR+P S+ L
Sbjct: 695 HRYPMSTIL 703
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 HRFPFSSAL 9
HR+P S+ L
Sbjct: 695 HRYPMSTIL 703
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 HRFPFSSAL 9
HR+P S+ L
Sbjct: 695 HRYPMSTIL 703
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 HRFPFSSAL 9
HR+P S+ L
Sbjct: 695 HRYPMSTIL 703
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 HRFPFSSAL 9
HR+P S+ L
Sbjct: 694 HRYPMSTIL 702
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 1 HRFPFSS 7
+RFPF S
Sbjct: 573 NRFPFDS 579
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 HRFPF 5
H+FPF
Sbjct: 550 HKFPF 554
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 4 PFSSALQ 10
PFS ALQ
Sbjct: 949 PFSLALQ 955
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 1 HRFPFSS 7
+RFPF S
Sbjct: 548 NRFPFDS 554
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 HRFPF 5
H+FPF
Sbjct: 2114 HQFPF 2118
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 HRFPF 5
H+FPF
Sbjct: 2114 HQFPF 2118
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 HRFPF 5
H+FPF
Sbjct: 2114 HQFPF 2118
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 HRFPFSS 7
HR+P S+
Sbjct: 694 HRYPMST 700
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 1 HRFPF 5
H FPF
Sbjct: 553 HEFPF 557
>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)
Query: 2 RFPFSS 7
RFPF+S
Sbjct: 196 RFPFNS 201
>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RFPFSS 7
RFPF+S
Sbjct: 196 RFPFNS 201
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 4 PFSSALQ 10
PF SAL+
Sbjct: 651 PFKSALE 657
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 4 PFSSALQ 10
PF SAL+
Sbjct: 651 PFKSALE 657
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 4 PFSSALQ 10
PF SAL+
Sbjct: 652 PFKSALE 658
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 4 PFSSALQ 10
PF SAL+
Sbjct: 651 PFKSALE 657
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 4 PFSSALQ 10
PF SAL+
Sbjct: 651 PFKSALE 657
127|Sequence|631|640|SSALQRMSVV
***** No hits found ******
128|Sequence|636|645|RMSVVVAWPG
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 3 SVVVAWPG 10
SV+V +PG
Sbjct: 644 SVIVPYPG 651
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 2 MSVVVAW 8
MSV+V W
Sbjct: 313 MSVMVQW 319
129|Sequence|641|650|VAWPGATQPE
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 VAWPGATQP 9
+AWP AT P
Sbjct: 734 LAWPTATNP 742
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PGATQPE 10
PG+T PE
Sbjct: 75 PGSTMPE 81
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PGATQPE 10
PG+T PE
Sbjct: 75 PGSTMPE 81
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 4 PGATQPE 10
P ATQPE
Sbjct: 286 PNATQPE 292
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 4 PGATQPE 10
P ATQPE
Sbjct: 286 PNATQPE 292
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 4 PGATQPE 10
P ATQPE
Sbjct: 286 PNATQPE 292
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 4 PGATQPE 10
P ATQPE
Sbjct: 285 PNATQPE 291
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 4 PGATQPE 10
P ATQPE
Sbjct: 286 PNATQPE 292
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 4 PGATQPE 10
P ATQPE
Sbjct: 286 PNATQPE 292
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 AWPGATQ 8
AWP A++
Sbjct: 1176 AWPNASR 1182
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 AWPGATQ 8
AWP A++
Sbjct: 1176 AWPNASR 1182
>sp|CCU83_HHV6U|PUTATIVE CC-type chemokine U83|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 AWPGATQP 9
A PG T+P
Sbjct: 39 AVPGKTEP 46
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 2 AWPGATQPE 10
AW G+ QP+
Sbjct: 193 AWRGSEQPD 201
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 1 VAWPG 5
V+WPG
Sbjct: 720 VSWPG 724
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 1 VAWPG 5
V+WPG
Sbjct: 729 VSWPG 733
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 2 AWPGATQPE 10
AW G+ QP+
Sbjct: 192 AWRGSEQPD 200
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 2 AWPGATQP 9
AWPG P
Sbjct: 631 AWPGDPVP 638
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 1 VAWPG 5
V+WPG
Sbjct: 696 VSWPG 700
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 1 VAWPG 5
V+WPG
Sbjct: 717 VSWPG 721
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 WPGATQ 8
WP AT+
Sbjct: 15 WPAATR 20
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 1 VAWPG 5
V+WPG
Sbjct: 714 VSWPG 718
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 AWPGATQPE 10
A PGA PE
Sbjct: 475 APPGAKAPE 483
>sp|VP6_ROTGI|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Rat/United
Query: 3 WPGATQP 9
WP T P
Sbjct: 305 WPQGTSP 311
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 1 VAWPG 5
V+WPG
Sbjct: 745 VSWPG 749
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 1 VAWPG 5
V+WPG
Sbjct: 700 VSWPG 704
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 1 VAWPG 5
V+WPG
Sbjct: 721 VSWPG 725
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 1 VAWPG 5
V+WPG
Sbjct: 702 VSWPG 706
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VAWPGAT 7
V WPG +
Sbjct: 162 VIWPGTS 168
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VAWPGAT 7
V WPG +
Sbjct: 162 VIWPGTS 168
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 WPGATQ 8
WP AT+
Sbjct: 1554 WPTATE 1559
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 AWPGATQ 8
+WPGA +
Sbjct: 2180 SWPGAAE 2186
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 2 AWPGATQPE 10
AW +PE
Sbjct: 315 AWSAGVKPE 323
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 PGATQP 9
PGAT P
Sbjct: 1793 PGATDP 1798
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 PGATQP 9
PGAT P
Sbjct: 1793 PGATDP 1798
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 PGATQP 9
PGAT P
Sbjct: 1793 PGATDP 1798
130|Sequence|646|655|ATQPEAYVKG
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 3 QPEAYV 8
QPEAY+
Sbjct: 316 QPEAYL 321
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 3 QPEAYV 8
QPEAY+
Sbjct: 316 QPEAYL 321
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 3 QPEAYV 8
QPEAY+
Sbjct: 316 QPEAYL 321
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 QPEAYVK 9
QP AY K
Sbjct: 2633 QPNAYYK 2639
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 QPEAYVK 9
QP AY K
Sbjct: 2633 QPNAYYK 2639
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 ATQPEAYVK 9
AT P +VK
Sbjct: 739 ATNPSVFVK 747
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 ATQPEAYVK 9
AT P +VK
Sbjct: 739 ATNPSVFVK 747
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 ATQPEAYVK 9
AT P +VK
Sbjct: 739 ATNPSVFVK 747
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 ATQPEAYVK 9
AT P +VK
Sbjct: 739 ATNPSVFVK 747
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 ATQPEAYVK 9
AT P +VK
Sbjct: 739 ATNPSIFVK 747
131|Sequence|651|660|AYVKGSPELV
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 AYVKGSPEL 9
AY+KG PE+
Sbjct: 695 AYMKGLPEM 703
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 3 VKGSPEL 9
+KGSPE
Sbjct: 130 IKGSPEF 136
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AYVKGSPELV 10
Y+K S ELV
Sbjct: 597 GYIKASQELV 606
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AYVKGSPELV 10
Y+K S ELV
Sbjct: 597 GYIKASQELV 606
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 3 VKGSPELV 10
VKG P++V
Sbjct: 313 VKGGPDMV 320
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 1 AYVKGSPELV 10
Y+K S EL+
Sbjct: 589 GYIKASQELI 598
>sp|FUS_HRSVR|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 2 YVKGSP 7
YVKG P
Sbjct: 468 YVKGEP 473
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 2 YVKGSP 7
YVKG P
Sbjct: 468 YVKGEP 473
>sp|FUS_HRSVA|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 2 YVKGSP 7
YVKG P
Sbjct: 468 YVKGEP 473
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 2 YVKGSP 7
YVKG P
Sbjct: 468 YVKGEP 473
>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus
Query: 2 YVKGSP 7
YVKG P
Sbjct: 468 YVKGEP 473
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 AYVKGSP 7
AYV+G P
Sbjct: 525 AYVEGQP 531
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 2 YVKGSPE 8
Y+K +PE
Sbjct: 43 YIKNNPE 49
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 YVKGSPE 8
Y+K +PE
Sbjct: 43 YIKNNPE 49
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 VKGSPELV 10
V+G+P L+
Sbjct: 38 VRGAPRLI 45
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 AYVKGSP 7
AY++G P
Sbjct: 526 AYIEGQP 532
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 2 YVKGSPELV 10
+VKG P V
Sbjct: 396 HVKGRPRFV 404
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 2 YVKGSP 7
Y+KG+P
Sbjct: 275 YMKGTP 280
132|Sequence|656|665|SPELVAGLCN
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 PELVAGLC 9
PE+ AG+C
Sbjct: 1771 PEIFAGMC 1778
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 PELVAGLC 9
PE+ AG+C
Sbjct: 1771 PEIFAGMC 1778
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 PELVAGLC 9
PE+ AG+C
Sbjct: 1771 PEIFAGMC 1778
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 PELVAGLC 9
PE+ AG+C
Sbjct: 1771 PEIFAGMC 1778
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 PELVAGLC 9
PE+ AG+C
Sbjct: 1771 PEIFAGMC 1778
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 PELVAGLC 9
PE+ AG+C
Sbjct: 1771 PEIFAGMC 1778
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 PELVAGLC 9
PE+ AG+C
Sbjct: 1771 PEIFAGMC 1778
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 PELVAGLC 9
PE+ AG+C
Sbjct: 1771 PEIFAGMC 1778
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 PELVAGLC 9
PE+ AG+C
Sbjct: 1771 PEIFAGMC 1778
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 2 PELVAGLCN 10
P++VA LC+
Sbjct: 326 PQMVAALCS 334
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 2 PELVAGLCN 10
P++VA LC+
Sbjct: 326 PQMVAALCS 334
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 2 PELVAGLCN 10
P++VA LC+
Sbjct: 326 PQMVAALCS 334
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 2 PELVAGLCN 10
P++VA LC+
Sbjct: 326 PQMVAALCS 334
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 SPELVAGLC 9
S E++AG+C
Sbjct: 584 SDEVLAGMC 592
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 SPELVAGLCN 10
SPE+ CN
Sbjct: 1986 SPEVAVAACN 1995
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 2 PELVAGLC 9
P+L GLC
Sbjct: 248 PDLFDGLC 255
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 2 PELVAGLC 9
P+L GLC
Sbjct: 248 PDLFDGLC 255
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 PELVAGLCN 10
P L+ +CN
Sbjct: 1979 PSLIQSICN 1987
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 SPELVA 6
SPELVA
Sbjct: 607 SPELVA 612
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 1 SPELVAGL 8
SPE +AGL
Sbjct: 726 SPERLAGL 733
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SPELVAGLCN 10
+PEL++ LC+
Sbjct: 259 NPELISLLCD 268
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 SPELVAGLCN 10
+PEL++ LC+
Sbjct: 259 NPELISLLCD 268
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 LVAGLCN 10
++AG+CN
Sbjct: 992 IMAGICN 998
Query: 1 SPELVAGLCN 10
+PE +CN
Sbjct: 2019 NPETAVAVCN 2028
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 LVAGLCN 10
++AG+CN
Sbjct: 992 IMAGICN 998
Query: 1 SPELVAGLCN 10
+PE +CN
Sbjct: 2019 NPETAVAVCN 2028
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 LVAGLCN 10
++AG+CN
Sbjct: 992 IMAGICN 998
Query: 1 SPELVAGLCN 10
+PE +CN
Sbjct: 2020 NPETAVAVCN 2029
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 LVAGLCN 10
++AG+CN
Sbjct: 992 IMAGICN 998
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 2 PELVAGLC 9
PE+ GLC
Sbjct: 111 PEMGMGLC 118
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 1 SPELVAGLCN 10
+P+L++ +C+
Sbjct: 262 APDLISTICS 271
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 SPELVAGLCN 10
SP V LC+
Sbjct: 1177 SPSFVVSLCS 1186
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 SPELVAGLCN 10
+PE+ CN
Sbjct: 1973 NPEVAVAACN 1982
>sp|ORF58_HHV8P|PROTEIN ORF58|Human herpesvirus 8 type P
Query: 1 SPELVAGLC 9
+P++V LC
Sbjct: 330 APQMVLALC 338
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 SPELVAGLCN 10
+PE+ CN
Sbjct: 655 NPEVAVAACN 664
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 PELVAGLCN 10
PE+ CN
Sbjct: 1974 PEVAVAACN 1982
133|Sequence|661|670|AGLCNPETVP
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 1 AGLCNPE 7
AG CNPE
Sbjct: 403 AGYCNPE 409
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LCNPETV 9
LCNPE+V
Sbjct: 997 LCNPESV 1003
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 2 GLCNPET 8
LCNP+T
Sbjct: 778 ALCNPKT 784
>sp|PHOSP_PI3H4|PHOSPHOPROTEIN parainfluenza 3 virus (strain
Query: 1 AGLCNPETVP 10
A +C PE P
Sbjct: 59 ATICQPEIKP 68
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 LCNPE 7
LCNPE
Sbjct: 1381 LCNPE 1385
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 GLCNPETVP 10
GL PE++P
Sbjct: 232 GLQTPESIP 240
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 GLCNPETV 9
G CNP TV
Sbjct: 333 GSCNPVTV 340
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 2 GLCNPETV 9
G CNP TV
Sbjct: 333 GSCNPVTV 340
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 2 GLCNPETV 9
G CNP TV
Sbjct: 333 GSCNPVTV 340
>sp|TEG3_VZVO|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 LCNPETVP 10
LC P T+P
Sbjct: 168 LCVPTTIP 175
>sp|TEG3_VZVD|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LCNPETVP 10
LC P T+P
Sbjct: 168 LCVPTTIP 175
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 2 GLCNPETV 9
G CNP TV
Sbjct: 333 GSCNPVTV 340
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GLCNPE 7
G+CNP+
Sbjct: 772 GICNPK 777
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 3 LCNPETV 9
+CNPE V
Sbjct: 1088 ICNPELV 1094
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 GLCNPETV 9
G CNP T+
Sbjct: 333 GSCNPVTI 340
>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)
Query: 3 LCNPETV 9
LC+PE +
Sbjct: 77 LCSPEEI 83
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 3 LCNPETV 9
+C+P TV
Sbjct: 193 ICSPSTV 199
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 1 AGLCNPE 7
A LC PE
Sbjct: 18 AALCAPE 24
>sp|VP7_ROTHW|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 3 LCNPETV 9
LCNP V
Sbjct: 164 LCNPMDV 170
>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 3 LCNPETV 9
LCNP V
Sbjct: 164 LCNPMDV 170
>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 3 LCNPETV 9
LCNP V
Sbjct: 164 LCNPMDV 170
>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 3 LCNPETV 9
LCNP V
Sbjct: 164 LCNPMDV 170
>sp|VP7_ROTAD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 3 LCNPETV 9
LCNP V
Sbjct: 164 LCNPMDV 170
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 AGLCNP 6
AG+C+P
Sbjct: 1347 AGVCSP 1352
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 CNPET 8
CNP+T
Sbjct: 1943 CNPDT 1947
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 NPETVP 10
NP+T+P
Sbjct: 415 NPQTLP 420
>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18
Query: 1 AGLCNPETVP 10
+G C P+ VP
Sbjct: 24 SGTCPPDVVP 33
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CNPE 7
CNPE
Sbjct: 46 CNPE 49
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 4 CNPETV 9
C PETV
Sbjct: 542 CIPETV 547
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 4 CNPETV 9
C PETV
Sbjct: 542 CIPETV 547
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 4 CNPETV 9
C PETV
Sbjct: 542 CIPETV 547
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 GLCNPETVP 10
G+C + VP
Sbjct: 2117 GICPEDVVP 2125
>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61
Query: 1 AGLCNPETVP 10
+G C P+ VP
Sbjct: 21 SGTCPPDVVP 30
134|Sequence|666|675|PETVPTDFAQ
>sp|TEG3_VZVO|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PETVPTDFAQ 10
P T+PTD Q
Sbjct: 171 PTTIPTDMNQ 180
>sp|TEG3_VZVD|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PETVPTDFAQ 10
P T+PTD Q
Sbjct: 171 PTTIPTDMNQ 180
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 3 TVPTDFA 9
T+PTDFA
Sbjct: 331 TLPTDFA 337
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 TVPTDFA 9
T+PTDFA
Sbjct: 332 TLPTDFA 338
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 TVPTDFA 9
T+PTDFA
Sbjct: 332 TLPTDFA 338
>sp|X_HBVB7|PROTEIN X|Hepatitis B virus genotype B1
Query: 1 PETVPTD 7
P TVPTD
Sbjct: 42 PSTVPTD 48
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 PETVPTDFAQ 10
PE++PT Q
Sbjct: 236 PESIPTTPCQ 245
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 TVPTDFA 9
T+PTDF+
Sbjct: 332 TLPTDFS 338
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 1 PETVPT 6
PET PT
Sbjct: 321 PETFPT 326
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 1 PETVPT 6
PET PT
Sbjct: 321 PETFPT 326
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 4 VPTDFA 9
+P+DFA
Sbjct: 48 IPSDFA 53
>sp|UNG_HHV2H|URACIL-DNA glycosylase|Human herpesvirus 2 (strain HG52)
Query: 1 PETVPTDFA 9
P +VP D+A
Sbjct: 23 PTSVPLDWA 31
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 TVPTDFA 9
TVP +FA
Sbjct: 5567 TVPEEFA 5573
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 TVPTDFA 9
++PTDF+
Sbjct: 331 SLPTDFS 337
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 TVPTDFA 9
++PTDF+
Sbjct: 331 SLPTDFS 337
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 TVPTDFA 9
++PTDF+
Sbjct: 331 SLPTDFS 337
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 VPTDFA 9
+PTDFA
Sbjct: 333 LPTDFA 338
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 TVPTDFA 9
++PTDF+
Sbjct: 331 SLPTDFS 337
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 2 ETVPTDF 8
E+VPTD
Sbjct: 270 ESVPTDL 276
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 PETVPTDF 8
PE VPT +
Sbjct: 1072 PELVPTSW 1079
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 5 PTDFAQ 10
P DFAQ
Sbjct: 304 PLDFAQ 309
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 5 PTDFAQ 10
P DFAQ
Sbjct: 304 PLDFAQ 309
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 3 TVPTDFA 9
++PTDF+
Sbjct: 331 SLPTDFS 337
135|Sequence|671|680|TDFAQMLQSY
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 DFAQMLQS 9
DF++M+QS
Sbjct: 1962 DFSEMMQS 1969
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 2 DFAQMLQS 9
DFAQ+L++
Sbjct: 162 DFAQLLKT 169
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 2 DFAQMLQS 9
DFAQ+L++
Sbjct: 162 DFAQLLKT 169
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DFAQMLQS 9
DF Q+L+S
Sbjct: 645 DFTQLLES 652
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 2 DFAQMLQ 8
DF+QM+Q
Sbjct: 311 DFSQMVQ 317
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TDFAQMLQS 9
TDF LQS
Sbjct: 1989 TDFKTWLQS 1997
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TDFAQMLQS 9
TDF LQS
Sbjct: 1989 TDFKTWLQS 1997
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TDFAQMLQS 9
TDF LQS
Sbjct: 1989 TDFKTWLQS 1997
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TDFAQMLQS 9
TDF LQS
Sbjct: 1989 TDFKTWLQS 1997
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TDFAQMLQS 9
TDF LQS
Sbjct: 1989 TDFKTWLQS 1997
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 TDFAQMLQS 9
+ FA++LQS
Sbjct: 2190 SQFARLLQS 2198
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 2 DFAQMLQSY 10
DFA+ Q+Y
Sbjct: 170 DFAKEAQTY 178
>sp|BZLF1_EBVB9|LYTIC switch protein BZLF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 FAQMLQSY 10
F Q+LQ Y
Sbjct: 193 FKQLLQHY 200
136|Sequence|676|685|MLQSYTAAGY
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 5 YTAAGY 10
YTAAGY
Sbjct: 516 YTAAGY 521
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 4 SYTAAGY 10
+YT+AGY
Sbjct: 511 TYTSAGY 517
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LQSYTAAGY 10
+ +YTA GY
Sbjct: 241 IAAYTATGY 249
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LQSYTAAGY 10
+ +YTA GY
Sbjct: 241 IAAYTATGY 249
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 5 YTAAGY 10
YT+AGY
Sbjct: 515 YTSAGY 520
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 5 YTAAGY 10
YT+AGY
Sbjct: 515 YTSAGY 520
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 QSYTAAGY 10
Q+YT GY
Sbjct: 802 QTYTLEGY 809
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 QSYTAAGY 10
Q+YT GY
Sbjct: 802 QTYTLEGY 809
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 5 YTAAGY 10
Y+AAGY
Sbjct: 516 YSAAGY 521
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 5 YTAAGY 10
YT+AGY
Sbjct: 514 YTSAGY 519
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 5 YTAAGY 10
YT+AGY
Sbjct: 514 YTSAGY 519
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 MLQSYTAAG 9
+LQ Y A G
Sbjct: 540 LLQKYVATG 548
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 MLQSYTAAGY 10
++ YTA GY
Sbjct: 510 VVDEYTAGGY 519
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 1 MLQSYTAAGY 10
+L SY +GY
Sbjct: 121 LLDSYPDSGY 130
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 4 SYTAAGY 10
+YT+AG+
Sbjct: 511 TYTSAGF 517
>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LQSYTAAGY 10
+Q+Y +GY
Sbjct: 426 VQTYVLSGY 434
>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LQSYTAAGY 10
+Q+Y +GY
Sbjct: 426 VQTYVLSGY 434
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 5 YTAAGY 10
YT AGY
Sbjct: 516 YTTAGY 521
137|Sequence|681|690|TAAGYRVVAL
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 TAAGYRVVAL 10
T+AGY VAL
Sbjct: 1846 TSAGYPYVAL 1855
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 TAAGYRVVAL 10
T+AGY VAL
Sbjct: 1847 TSAGYPYVAL 1856
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 TAAGYRVVAL 10
T+AGY VAL
Sbjct: 1845 TSAGYPYVAL 1854
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 TAAGYRVVAL 10
T+AGY VAL
Sbjct: 1855 TSAGYPYVAL 1864
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 TAAGYRVVAL 10
T+AGY VAL
Sbjct: 1843 TSAGYPYVAL 1852
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 TAAGYRVVAL 10
T+AGY VAL
Sbjct: 1848 TSAGYPYVAL 1857
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 TAAGYRVVAL 10
T+AGY VAL
Sbjct: 1836 TSAGYPYVAL 1845
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 TAAGYRVVAL 10
T+AGY VAL
Sbjct: 1836 TSAGYPYVAL 1845
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 TAAGYRVVAL 10
T+AGY VAL
Sbjct: 1837 TSAGYPYVAL 1846
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 TAAGYRVVAL 10
T+AGY VAL
Sbjct: 1835 TSAGYPYVAL 1844
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 TAAGYRVVAL 10
T+AGY VAL
Sbjct: 1837 TSAGYPYVAL 1846
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 TAAGYRVVAL 10
T+AGY VAL
Sbjct: 1837 TSAGYPYVAL 1846
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 TAAGYRVVAL 10
T+AGY VAL
Sbjct: 1839 TSAGYPYVAL 1848
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 TAAGYRVVAL 10
T+AGY VAL
Sbjct: 1834 TSAGYPYVAL 1843
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 TAAGYRVVAL 10
T+AGY VAL
Sbjct: 1853 TSAGYPYVAL 1862
138|Sequence|686|695|RVVALASKPL
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 2 VVALASKPL 10
+VALAS+P+
Sbjct: 367 IVALASQPV 375
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 RVVALASKP 9
R VAL SKP
Sbjct: 1410 RSVALLSKP 1418
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 3 VALASKP 9
++LASKP
Sbjct: 536 ISLASKP 542
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 3 VALASKP 9
++LASKP
Sbjct: 536 ISLASKP 542
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 3 VALASKP 9
++LASKP
Sbjct: 536 ISLASKP 542
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 3 VALASKP 9
++LASKP
Sbjct: 536 ISLASKP 542
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 3 VALASKP 9
++LASKP
Sbjct: 536 ISLASKP 542
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 3 VALASKP 9
++LASKP
Sbjct: 536 ISLASKP 542
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 3 VALASKP 9
++LASKP
Sbjct: 536 ISLASKP 542
139|Sequence|691|700|ASKPLPTVPS
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 2 SKPLPTVP 9
+ P+PT+P
Sbjct: 604 TAPVPTIP 611
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 SKPLPTVP 9
+ P+PT+P
Sbjct: 605 TAPVPTIP 612
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 SKPLPTVP 9
+ P+PT+P
Sbjct: 592 TAPVPTIP 599
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 SKPLPTVP 9
+ P+PT+P
Sbjct: 592 TAPVPTIP 599
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 2 SKPLPTVP 9
+ P+PT+P
Sbjct: 598 TAPVPTIP 605
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 2 SKPLPTVP 9
+ P+PT+P
Sbjct: 592 TAPVPTIP 599
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 2 SKPLPTVP 9
+ P+PT+P
Sbjct: 605 TAPVPTIP 612
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 2 SKPLPTVP 9
+ P+PT+P
Sbjct: 592 TAPVPTIP 599
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 2 SKPLPTVP 9
+ P+PT+P
Sbjct: 592 TAPVPTIP 599
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 2 SKPLPTVP 9
+ P+PT+P
Sbjct: 598 TAPVPTIP 605
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 2 SKPLPTVP 9
+ P+PT+P
Sbjct: 592 TAPVPTIP 599
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 2 SKPLPTVP 9
+ P+PT+P
Sbjct: 592 TAPVPTIP 599
>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 4 PLPTVP 9
P+P+VP
Sbjct: 162 PIPSVP 167
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 2 SKPLPTVP 9
+ P+PT+P
Sbjct: 591 TAPVPTIP 598
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 2 SKPLPTVP 9
+ P+PT+P
Sbjct: 591 TAPVPTIP 598
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 SKPLPTVP 9
+ P+PT+P
Sbjct: 591 TAPVPTIP 598
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 2 SKPLPTVP 9
+ P+PT+P
Sbjct: 591 TAPVPTIP 598
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 SKPLPTVPS 10
S+P PT PS
Sbjct: 451 SRPEPTAPS 459
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 KPLPTVPS 10
+P P VPS
Sbjct: 158 RPKPPVPS 165
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 2 SKPLPTVP 9
+KPLPT P
Sbjct: 3 TKPLPTAP 10
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 4 PLPTVPS 10
PLP PS
Sbjct: 562 PLPLAPS 568
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 SKPLPTVP 9
+KPLPT P
Sbjct: 3 TKPLPTAP 10
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 SKPLPTVPS 10
++PLP++P
Sbjct: 1353 AQPLPSIPE 1361
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ASKPLPTV 8
A+KPLP++
Sbjct: 234 AAKPLPSL 241
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 3 KPLPTV 8
+PLPTV
Sbjct: 523 RPLPTV 528
>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16
Query: 1 ASKPLPTVPS 10
++ P+P+VPS
Sbjct: 378 STTPVPSVPS 387
140|Sequence|696|705|PTVPSLEAAQ
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 TVPSLEAAQ 10
T PSLE Q
Sbjct: 2300 TYPSLETIQ 2308
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 TVPSLEAAQ 10
T PSLE Q
Sbjct: 2300 TYPSLETIQ 2308
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 1 PTVPSLEAA 9
P++PS+ +A
Sbjct: 276 PSIPSIPSA 284
141|Sequence|701|710|LEAAQQLTRD
>sp|ORF23_TTVV1|PROBABLE protein VP2|Torque teno virus (strain VT416)
Query: 1 LEAAQQLTRD 10
LEA + LTR+
Sbjct: 137 LEAYKSLTRN 146
142|Sequence|706|715|QLTRDTVEGD
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 LTRDTVEG 9
LT+D VEG
Sbjct: 2335 LTQDNVEG 2342
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 LTRDTVEG 9
LT+D VEG
Sbjct: 2335 LTQDNVEG 2342
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 QLTRDTVEGD 10
Q T D V+GD
Sbjct: 300 QPTEDVVDGD 309
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 QLTRDTVEGD 10
Q T D V+GD
Sbjct: 300 QPTEDVVDGD 309
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 QLTRDTVEGD 10
Q T D V+GD
Sbjct: 300 QPTEDVVDGD 309
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 QLTRDTVEGD 10
Q T D V+GD
Sbjct: 300 QPTEDVVDGD 309
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 RDTVEGD 10
RDT++GD
Sbjct: 498 RDTMQGD 504
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 QLTRDTVEGD 10
++ R+TVE D
Sbjct: 514 EVERETVEAD 523
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 1 QLTRDTV 7
QLTR+TV
Sbjct: 493 QLTRETV 499
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 QLTRDTVEGD 10
+LTR V GD
Sbjct: 3164 RLTRMAVSGD 3173
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 QLTRDTVEGD 10
++ R+T+E D
Sbjct: 514 EVERETIEAD 523
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 4 RDTVEG 9
RD+VEG
Sbjct: 365 RDSVEG 370
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 RDTVEG 9
RD+VEG
Sbjct: 365 RDSVEG 370
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 1 QLTRDTVEG 9
QLT D ++G
Sbjct: 53 QLTWDPIDG 61
143|Sequence|711|720|TVEGDLSLLG
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 2 VEGDLSLLG 10
V GD+ LLG
Sbjct: 483 VMGDVELLG 491
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 GDLSLLG 10
GDL LLG
Sbjct: 1012 GDLVLLG 1018
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 VEGDLSLLG 10
VEG+ +LG
Sbjct: 1686 VEGNFKILG 1694
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 VEGDLSLLG 10
VEG+ +LG
Sbjct: 1677 VEGNFKILG 1685
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 VEGDLSLLG 10
VEG+ +LG
Sbjct: 1678 VEGNFKILG 1686
>sp|KRB2_VACCC|PSEUDOKINASE OPG198|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GDLSLLG 10
GDL +LG
Sbjct: 200 GDLEMLG 206
>sp|KRB2_VACCA|PSEUDOKINASE OPG198|Vaccinia virus (strain Ankara) (VACV)
Query: 4 GDLSLLG 10
GDL +LG
Sbjct: 200 GDLEMLG 206
>sp|KRB2_MONPV|PSEUDOKINASE OPG198|Monkeypox virus (MPXV)
Query: 4 GDLSLLG 10
GDL +LG
Sbjct: 199 GDLEMLG 205
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 1 TVEGDLSLL 9
T+EGD+ +
Sbjct: 194 TIEGDIGVF 202
>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 1 TVEGDLSLL 9
T+EGD+ +
Sbjct: 194 TIEGDIGVF 202
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 1 TVEGDLS 7
+V+GDLS
Sbjct: 103 SVDGDLS 109
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 VEGDLSLLG 10
+EG L L+G
Sbjct: 288 IEGSLPLIG 296
>sp|GLRX2_VARV|GLUTAREDOXIN-2 virus
Query: 3 EGDLSLLG 10
+GD S+LG
Sbjct: 44 DGDSSMLG 51
>sp|GLRX2_VAR67|GLUTAREDOXIN-2 virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 EGDLSLLG 10
+GD S+LG
Sbjct: 44 DGDSSMLG 51
>sp|GLRX2_CWPXG|GLUTAREDOXIN-2 virus (strain GRI-90 /
Query: 3 EGDLSLLG 10
+GD S+LG
Sbjct: 44 DGDSSMLG 51
>sp|GLRX2_VACCT|GLUTAREDOXIN-2 virus (strain Tian Tan)
Query: 3 EGDLSLLG 10
+GD S+LG
Sbjct: 44 DGDSSMLG 51
>sp|GLRX2_VACCA|GLUTAREDOXIN-2 virus (strain Ankara) (VACV)
Query: 3 EGDLSLLG 10
+GD S+LG
Sbjct: 44 DGDSSMLG 51
>sp|GLRX2_MONPV|GLUTAREDOXIN-2 virus (MPXV)
Query: 3 EGDLSLLG 10
+GD S+LG
Sbjct: 44 DGDSSMLG 51
>sp|GLRX2_VACCC|GLUTAREDOXIN-2 virus (strain Copenhagen) (VACV)
Query: 3 EGDLSLLG 10
+GD S+LG
Sbjct: 44 DGDSSMLG 51
>sp|IR11_HCMVA|VIRAL Fc-gamma receptor-like protein IR11|Human cytomegalovirus (strain
Query: 1 TVEGDL 6
TV+GDL
Sbjct: 228 TVDGDL 233
144|Sequence|716|725|LSLLGLLVMR
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 1 LSLLGLLVM 9
LSL+GLL +
Sbjct: 47 LSLIGLLAI 55
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 LSLLGLLVM 9
LSL+GLL +
Sbjct: 47 LSLIGLLAI 55
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 LSLLGLLVM 9
LSL+GLL +
Sbjct: 47 LSLIGLLAI 55
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 1 LSLLGLLVM 9
LSL+GLL +
Sbjct: 47 LSLIGLLAI 55
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 1 LSLLGLLVM 9
LSL+GLL +
Sbjct: 47 LSLIGLLAI 55
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 LSLLGLLVM 9
LSL+GLL +
Sbjct: 47 LSLIGLLAI 55
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 LGLLVM 9
LGLLVM
Sbjct: 1156 LGLLVM 1161
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 LGLLVM 9
LGLLVM
Sbjct: 1156 LGLLVM 1161
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 4 LGLLVM 9
LGLLVM
Sbjct: 1085 LGLLVM 1090
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 LGLLVM 9
LGLLVM
Sbjct: 1157 LGLLVM 1162
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 LGLLVM 9
LGLLVM
Sbjct: 1157 LGLLVM 1162
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 LGLLVM 9
LGLLVM
Sbjct: 1157 LGLLVM 1162
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 LGLLVM 9
LGLLVM
Sbjct: 1157 LGLLVM 1162
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 SLLGLLV 8
SL+GLLV
Sbjct: 139 SLVGLLV 145
145|Sequence|721|730|LLVMRNLLKP
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LVMRNLLKP 10
V RNL+KP
Sbjct: 2558 FVERNLVKP 2566
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LVMRNLLKP 10
V RNL+KP
Sbjct: 2557 FVERNLVKP 2565
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LVMRNLLKP 10
V RNL+KP
Sbjct: 2558 FVERNLVKP 2566
>sp|PROF_VACCT|PROFILIN virus (strain Tian Tan)
Query: 1 LLVMRNLLKP 10
L+ RN+LKP
Sbjct: 51 LITNRNILKP 60
>sp|PROF_VACCC|PROFILIN virus (strain Copenhagen) (VACV)
Query: 1 LLVMRNLLKP 10
L+ RN+LKP
Sbjct: 51 LITNRNILKP 60
>sp|PROF_VACCA|PROFILIN virus (strain Ankara) (VACV)
Query: 1 LLVMRNLLKP 10
L+ RN+LKP
Sbjct: 46 LITNRNILKP 55
>sp|PROF_CWPXB|PROFILIN virus (strain Brighton Red)
Query: 1 LLVMRNLLKP 10
L+ RN+LKP
Sbjct: 51 LITNRNILKP 60
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 VMRNLLKP 10
VMR+ LKP
Sbjct: 1251 VMRDQLKP 1258
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 LLVMRNL 7
L+MRNL
Sbjct: 866 FLIMRNL 872
146|Sequence|726|735|NLLKPQTTPV
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 1 NLLKPQTTPV 10
NL+ PQ+TP+
Sbjct: 421 NLILPQSTPI 430
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 1 NLLKPQTTPV 10
NL+ PQ+TP+
Sbjct: 421 NLILPQSTPI 430
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 NLLKPQTTPV 10
NL+ PQ+TP+
Sbjct: 421 NLILPQSTPI 430
>sp|VU84_HHV6U|PROTEIN U84|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 NLLKPQTTP 9
N L PQTTP
Sbjct: 48 NNLSPQTTP 56
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 LKPQTTP 9
LKPQ TP
Sbjct: 532 LKPQFTP 538
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 1 NLLKPQTTPV 10
NL+ PQ TP+
Sbjct: 397 NLVLPQGTPI 406
>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)
Query: 2 LLKPQTT 8
LLKPQ T
Sbjct: 270 LLKPQIT 276
>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)
Query: 2 LLKPQTT 8
LLKPQ T
Sbjct: 270 LLKPQIT 276
>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann
Query: 2 LLKPQTT 8
LLKPQ T
Sbjct: 270 LLKPQIT 276
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LKPQTTP 9
LKPQ TP
Sbjct: 547 LKPQFTP 553
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 NLLKPQTTP 9
NLL P+T P
Sbjct: 83 NLLIPKTEP 91
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 LKPQTTPV 10
LKP+TT V
Sbjct: 1878 LKPETTLV 1885
>sp|GLYC_HRSV|MAJOR surface glycoprotein G|Human respiratory syncytial virus
Query: 3 LKPQTT 8
LKPQTT
Sbjct: 215 LKPQTT 220
>sp|GLYC_HRSV6|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 3 LKPQTT 8
LKPQTT
Sbjct: 215 LKPQTT 220
>sp|GLYC_HRSV4|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 3 LKPQTT 8
LKPQTT
Sbjct: 215 LKPQTT 220
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 NLLKPQTTP 9
NL+ P +TP
Sbjct: 528 NLVVPPSTP 536
>sp|GLYC_HRSV7|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 3 LKPQTT 8
LKPQTT
Sbjct: 215 LKPQTT 220
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 3 LKPQTTPV 10
KP+T PV
Sbjct: 215 FKPETKPV 222
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 3 LKPQTTPV 10
+KP TPV
Sbjct: 1590 IKPTNTPV 1597
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 3 LKPQTTPV 10
+KP TPV
Sbjct: 1590 IKPTNTPV 1597
147|Sequence|731|740|QTTPVIQALR
>sp|PAX_I61A1|PROTEIN PA-X|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 QTTPVIQAL 9
QT+PV++ L
Sbjct: 221 QTSPVLKTL 229
>sp|VTF3S_MONPV|INTERMEDIATE transcription factor 3 small|Monkeypox virus (MPXV)
Query: 1 QTTPVIQ 7
QTTP+I+
Sbjct: 23 QTTPMIK 29
>sp|VTF3S_VACCC|INTERMEDIATE transcription factor 3 small|Vaccinia virus (strain Copenhagen)
Query: 1 QTTPVIQ 7
QTTP+I+
Sbjct: 23 QTTPMIK 29
>sp|VTF3S_VACCA|INTERMEDIATE transcription factor 3 small|Vaccinia virus (strain Ankara)
Query: 1 QTTPVIQ 7
QTTP+I+
Sbjct: 23 QTTPMIK 29
>sp|VTF3S_VARV|INTERMEDIATE transcription factor 3 small|Variola virus
Query: 1 QTTPVIQ 7
QTTP+I+
Sbjct: 23 QTTPMIK 29
>sp|VTF3S_VAR67|INTERMEDIATE transcription factor 3 small|Variola virus (isolate
Query: 1 QTTPVIQ 7
QTTP+I+
Sbjct: 23 QTTPMIK 29
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 1 QTTPVI 6
QTTP++
Sbjct: 499 QTTPIV 504
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 1 QTTPVI 6
QTTP++
Sbjct: 499 QTTPIV 504
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 1 QTTPVIQ 7
QTTPVI
Sbjct: 306 QTTPVIH 312
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 QTTPVIQ 7
+TTPV+Q
Sbjct: 2434 RTTPVMQ 2440
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 TPVIQALR 10
TPV+ ALR
Sbjct: 2482 TPVLLALR 2489
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 TPVIQALR 10
TP++QA R
Sbjct: 870 TPLLQACR 877
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 TPVIQALR 10
TP++QA R
Sbjct: 870 TPLLQACR 877
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 QTTPVIQAL 9
+ TPV+Q +
Sbjct: 1015 ELTPVVQTI 1023
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 QTTPVIQA 8
+ TPVIQ+
Sbjct: 1745 EATPVIQS 1752
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 QTTPVIQ 7
+TTP++Q
Sbjct: 2437 RTTPIMQ 2443
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 QTTPVIQ 7
+TTP++Q
Sbjct: 2437 RTTPIMQ 2443
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 TPVIQALR 10
TPV+ ALR
Sbjct: 2484 TPVLLALR 2491
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 QTTPVIQAL 9
+ TPV+Q +
Sbjct: 1015 ELTPVVQTI 1023
148|Sequence|736|745|IQALRRTRIR
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 4 LRRTRIR 10
LRR+RIR
Sbjct: 1053 LRRSRIR 1059
149|Sequence|741|750|RTRIRAVMVT
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 RTRIRA 6
RTRIRA
Sbjct: 2882 RTRIRA 2887
150|Sequence|746|755|AVMVTGDNLQ
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 VTGDNLQ 10
+TGDN++
Sbjct: 438 ITGDNVE 444
Query: 1 AVMVTGDN 8
+VM+T DN
Sbjct: 5273 SVMLTNDN 5280
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 AVMVTGDN 8
+VM+T DN
Sbjct: 5296 SVMLTNDN 5303
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 AVMVTGDNLQ 10
++ VTGDN +
Sbjct: 299 SMTVTGDNTK 308
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 AVMVTGDNLQ 10
++ VTGDN +
Sbjct: 299 SMTVTGDNTK 308
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 AVMVTGDNLQ 10
++ VTGDN +
Sbjct: 299 SMTVTGDNTK 308
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 AVMVTGDNLQ 10
++ VTGDN +
Sbjct: 299 SMTVTGDNTK 308
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 VTGDNLQ 10
+TGDN++
Sbjct: 438 ITGDNVE 444
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 VTGDNL 9
VTGDN+
Sbjct: 5688 VTGDNV 5693
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 4 VTGDNLQ 10
VTG N+Q
Sbjct: 180 VTGGNMQ 186
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 2 VMVTGDNLQ 10
VMVTG +Q
Sbjct: 309 VMVTGSLIQ 317
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 VTGDNLQ 10
VTGDN +
Sbjct: 302 VTGDNTK 308
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 4 VTGDNLQ 10
VTGDN +
Sbjct: 302 VTGDNTK 308
151|Sequence|751|760|GDNLQTAVTV
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GDNLQT 6
GDN+QT
Sbjct: 19 GDNVQT 24
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GDNLQT 6
GDN+QT
Sbjct: 19 GDNVQT 24
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 NLQTAVT 9
N+QTA+T
Sbjct: 3350 NIQTAIT 3356
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GDNLQTAVT 9
G+NL TAV+
Sbjct: 315 GENLVTAVS 323
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GDNLQTAVT 9
G+NL TAV+
Sbjct: 315 GENLVTAVS 323
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GDNLQTAVT 9
G+NL TAV+
Sbjct: 315 GENLVTAVS 323
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 GDNLQTAVT 9
GDN AVT
Sbjct: 772 GDNQTIAVT 780
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 GDNLQTAVT 9
GDN AVT
Sbjct: 772 GDNQTIAVT 780
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 GDNLQTAVT 9
GDN AVT
Sbjct: 772 GDNQTIAVT 780
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 GDNLQTAVT 9
GDN AVT
Sbjct: 776 GDNQAIAVT 784
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 GDNLQTAVT 9
GDN AVT
Sbjct: 772 GDNQAIAVT 780
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 GDNLQTAVT 9
GDN AVT
Sbjct: 772 GDNQAIAVT 780
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 GDNLQTAVT 9
GDN AVT
Sbjct: 772 GDNQAIAVT 780
152|Sequence|756|765|TAVTVARGCG
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 TAVTVARGCG 10
T VTV+ CG
Sbjct: 1076 TTVTVSEHCG 1085
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 TAVTVARGCG 10
T+VTV CG
Sbjct: 1076 TSVTVTPNCG 1085
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 TAVTVARGC 9
TA+ V GC
Sbjct: 1864 TAIVVVGGC 1872
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 TAVTVARGC 9
TA+ V GC
Sbjct: 1864 TAIVVVGGC 1872
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 TAVTVARGCG 10
T VT+ CG
Sbjct: 1076 TTVTITEACG 1085
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 TAVTVARGCG 10
T VTV CG
Sbjct: 1072 TTVTVTEHCG 1081
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 TAVTVARGCG 10
T VT+ CG
Sbjct: 1077 TKVTITEDCG 1086
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 TAVTVARGCG 10
T VT+ CG
Sbjct: 1077 TKVTITEDCG 1086
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 TAVTVARGCG 10
T VT+ CG
Sbjct: 1077 TKVTITEDCG 1086
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 TAVTVARGCG 10
T VT+ CG
Sbjct: 1005 TKVTITEDCG 1014
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 TAVTVARGCG 10
T VT+ CG
Sbjct: 1077 TKVTITEDCG 1086
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 TAVTVARGCG 10
T VT+ CG
Sbjct: 1077 TKVTITEDCG 1086
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 TAVTVARGCG 10
T VT+ CG
Sbjct: 1077 TKVTITEDCG 1086
153|Sequence|761|770|ARGCGMVAPQ
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 4 CGMVAP 9
C MVAP
Sbjct: 504 CSMVAP 509
>sp|UNG_HHV6Z|URACIL-DNA glycosylase|Human herpesvirus 6B (strain Z29)
Query: 1 ARGCGM 6
RGCG+
Sbjct: 98 GRGCGL 103
>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ARGCGM 6
RGCG+
Sbjct: 98 GRGCGL 103
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 1 ARGCGM 6
AR CGM
Sbjct: 46 ARECGM 51
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 4 CGMVA 8
CGM+A
Sbjct: 1924 CGMIA 1928
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 1 ARGCGM 6
AR CGM
Sbjct: 46 ARECGM 51
>sp|U24_HHV6U|U24 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 CGMVAPQ 10
CG V+P
Sbjct: 21 CGQVSPH 27
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 1 ARGCGM 6
AR CGM
Sbjct: 46 ARECGM 51
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 1 ARGCGM 6
AR CGM
Sbjct: 46 ARECGM 51
>sp|VPX_HV2EH|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 ARGCG 5
A+GCG
Sbjct: 83 AKGCG 87
>sp|EBNA1_EBVA8|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 RGCGMVAPQ 10
RG G+ PQ
Sbjct: 522 RGIGLAIPQ 530
154|Sequence|766|775|MVAPQEHLII
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 MVAPQEH 7
MV+PQ H
Sbjct: 292 MVSPQRH 298
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 4 PQEHLII 10
PQEH+I+
Sbjct: 606 PQEHIIM 612
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PQEHLII 10
PQEH+++
Sbjct: 607 PQEHIVL 613
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PQEHLII 10
PQEH+++
Sbjct: 607 PQEHIVL 613
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PQEHLII 10
PQEH+++
Sbjct: 607 PQEHIVL 613
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PQEHLII 10
PQEH+++
Sbjct: 607 PQEHIVL 613
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PQEHLII 10
PQEH+++
Sbjct: 607 PQEHIVL 613
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PQEHLII 10
PQEH+++
Sbjct: 607 PQEHIVL 613
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 3 APQEHL 8
APQ+HL
Sbjct: 1293 APQQHL 1298
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PQEHLII 10
PQEH+++
Sbjct: 602 PQEHIVL 608
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 PQEHLII 10
PQEH+++
Sbjct: 607 PQEHIVL 613
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 4 PQEHLI 9
PQEH+I
Sbjct: 596 PQEHII 601
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 4 PQEHLI 9
PQEH+I
Sbjct: 596 PQEHII 601
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 4 PQEHLI 9
PQEH+I
Sbjct: 606 PQEHII 611
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 3 APQEHLI 9
+P EHLI
Sbjct: 23 SPSEHLI 29
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 APQEHLI 9
+P EHLI
Sbjct: 23 SPSEHLI 29
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PQEHLI 9
PQEH++
Sbjct: 607 PQEHIV 612
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 2 VAPQEH 7
V+PQEH
Sbjct: 642 VSPQEH 647
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 4 PQEHLI 9
PQEH++
Sbjct: 607 PQEHIV 612
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 4 PQEHLI 9
PQEH++
Sbjct: 607 PQEHIV 612
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 4 PQEHLI 9
PQEH++
Sbjct: 607 PQEHIV 612
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 4 PQEHLI 9
PQEH++
Sbjct: 607 PQEHIV 612
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 PQEHLI 9
PQEH++
Sbjct: 607 PQEHIV 612
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 PQEHLI 9
PQEH++
Sbjct: 607 PQEHIV 612
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PQEHLI 9
PQEH++
Sbjct: 607 PQEHIV 612
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 PQEHLI 9
PQEH++
Sbjct: 607 PQEHIV 612
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 428 VAPMEHV 434
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 PQEHLI 9
PQEH++
Sbjct: 607 PQEHIV 612
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 4 PQEHLI 9
P EHLI
Sbjct: 24 PSEHLI 29
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 VAPQEHLI 9
+ PQEH +
Sbjct: 5564 LVPQEHYV 5571
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 VAPQEHLI 9
+ PQEH +
Sbjct: 5541 LVPQEHYV 5548
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 2 VAPQEHLII 10
V+PQ H ++
Sbjct: 460 VSPQNHHVV 468
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 APQEHLII 10
P EHL++
Sbjct: 2056 GPNEHLLL 2063
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 MVAPQEHLII 10
+V+PQ H +
Sbjct: 292 IVSPQHHWFV 301
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 MVAPQEHLII 10
+V+PQ H +
Sbjct: 292 IVSPQHHWFV 301
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 425 VAPIEHI 431
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 428 VAPIEHI 434
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 425 VAPIEHI 431
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 409 VAPIEHI 415
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 4 PQEHLII 10
PQEH+ I
Sbjct: 606 PQEHIRI 612
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 4 PQEHLI 9
PQ+H+I
Sbjct: 602 PQDHII 607
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 432 VAPIEHI 438
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 4 PQEHLI 9
PQ+H+I
Sbjct: 596 PQDHII 601
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 428 VAPVEHV 434
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 428 VAPVEHV 434
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 428 VAPVEHV 434
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 428 VAPVEHV 434
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 MVAPQEHLII 10
+++PQ H +
Sbjct: 292 IISPQHHTFV 301
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 4 PQEHLII 10
P++H++I
Sbjct: 296 PEDHMLI 302
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 4 PQEHLII 10
P++H++I
Sbjct: 299 PEDHMLI 305
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 4 PQEHLI 9
PQ+H+I
Sbjct: 596 PQDHII 601
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 2 VAPQEHL 8
+AP EH+
Sbjct: 432 IAPLEHI 438
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 4 PQEHLI 9
PQ+H+I
Sbjct: 596 PQDHII 601
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 4 PQEHL 8
PQEH+
Sbjct: 606 PQEHI 610
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 4 PQEHL 8
PQEH+
Sbjct: 606 PQEHI 610
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 3 APQEHLI 9
AP HLI
Sbjct: 91 APMSHLI 97
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 4 PQEHL 8
PQEH+
Sbjct: 606 PQEHI 610
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 PQEHL 8
PQEH+
Sbjct: 607 PQEHI 611
>sp|PA_I82A2|POLYMERASE acidic protein|Influenza A virus (strain A/Camel/Mongolia/1982
Query: 2 VAPQEHL 8
VAP EH+
Sbjct: 15 VAPIEHI 21
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 4 PQEHLI 9
PQ+H++
Sbjct: 607 PQDHIV 612
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 4 PQEHLI 9
PQ+H++
Sbjct: 607 PQDHIV 612
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 PQEHLI 9
PQ+H++
Sbjct: 607 PQDHIV 612
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 PQEHLI 9
PQ+H++
Sbjct: 607 PQDHIV 612
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 PQEHLI 9
PQ+H++
Sbjct: 607 PQDHIV 612
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 4 PQEHLI 9
PQ+H++
Sbjct: 609 PQDHIV 614
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 PQEHLI 9
PQ+H++
Sbjct: 609 PQDHIV 614
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 PQEHLI 9
PQ+H++
Sbjct: 609 PQDHIV 614
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 PQEHLI 9
PQ+H++
Sbjct: 602 PQDHIV 607
155|Sequence|771|780|EHLIIVHATH
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EHLIIVHATH 10
+ +I++H TH
Sbjct: 214 QKMILMHTTH 223
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 EHLIIVHA 8
E L+I+HA
Sbjct: 753 EKLVILHA 760
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 EHLIIVHA 8
E L+I+HA
Sbjct: 753 EKLVILHA 760
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 EHLIIVHATH 10
+ +I++HAT+
Sbjct: 205 QKMILMHATY 214
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 HLIIVHA 8
HL++ HA
Sbjct: 263 HLVLTHA 269
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 HLIIVHA 8
HL++ HA
Sbjct: 263 HLVLTHA 269
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 5 IVHATH 10
IVHAT+
Sbjct: 618 IVHATY 623
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 1 EHLIIVHATH 10
+ +I++HAT+
Sbjct: 205 QKMILMHATY 214
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 EHLIIVHA 8
EH I +HA
Sbjct: 954 EHKIPIHA 961
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 EHLIIVHA 8
EH I +HA
Sbjct: 954 EHKIPIHA 961
156|Sequence|776|785|VHATHPERGQ
>sp|LF2_EBVG|PROTEIN LF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 HPERGQ 10
HPERGQ
Sbjct: 175 HPERGQ 180
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 VHATHPERGQ 10
+HA PER Q
Sbjct: 1599 IHAMTPERVQ 1608
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 VHATHPERGQ 10
+HA PER Q
Sbjct: 1599 IHAMTPERVQ 1608
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 VHATHPERGQ 10
+HA PER Q
Sbjct: 1599 IHAMTPERVQ 1608
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 VHATHPERGQ 10
+HA PER Q
Sbjct: 1599 IHAMTPERVQ 1608
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 VHATHPERGQ 10
V THP RG+
Sbjct: 278 VAITHPLRGE 287
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 VHATHPERGQ 10
V THP RG+
Sbjct: 253 VAITHPLRGE 262
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 VHATHPERGQ 10
+HA +P+ Q
Sbjct: 1294 IHAVYPQARQ 1303
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 VHATHPERGQ 10
+HA +P+ Q
Sbjct: 1294 IHAVYPQARQ 1303
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 THPERGQ 10
THPE +
Sbjct: 613 THPENSE 619
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 4 THPERGQ 10
THPE +
Sbjct: 613 THPENNE 619
>sp|BHLF1_EBVB9|UNCHARACTERIZED protein BHLF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 HPERG 9
HPERG
Sbjct: 213 HPERG 217
Query: 5 HPERG 9
HPERG
Sbjct: 338 HPERG 342
Query: 5 HPERG 9
HPERG
Sbjct: 463 HPERG 467
Query: 5 HPERG 9
HPERG
Sbjct: 588 HPERG 592
157|Sequence|781|790|PERGQPASLE
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ERGQPASLE 10
+RGQPA+ E
Sbjct: 726 DRGQPANEE 734
>sp|VP24_MABVR|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 ERGQPASL 9
ERGQP +L
Sbjct: 236 ERGQPLNL 243
Query: 2 ERGQPASLE 10
+ G+P+S+E
Sbjct: 172 DHGKPSSIE 180
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ERGQPASLE 10
+RGQPA+ E
Sbjct: 728 DRGQPANEE 736
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ERGQPASLE 10
+RGQPA+ E
Sbjct: 724 DRGQPANEE 732
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ERGQPASLE 10
+RGQPA+ E
Sbjct: 716 DRGQPANEE 724
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 RGQPASLE 10
RGQPA+ E
Sbjct: 730 RGQPANEE 737
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ERGQPAS 8
+RGQPA+
Sbjct: 717 DRGQPAN 723
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 1 PERGQPASL 9
PERG P L
Sbjct: 43 PERGHPGFL 51
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ERGQPAS 8
+RGQPA+
Sbjct: 725 DRGQPAN 731
>sp|MC005_MCV1|PROTEIN MC005|Molluscum contagiosum virus subtype 1
Query: 3 RGQPASL 9
RG+PASL
Sbjct: 68 RGEPASL 74
>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 ERGQPASL 9
E+GQP +L
Sbjct: 236 EKGQPLNL 243
Query: 2 ERGQPASLE 10
+ G+P+S+E
Sbjct: 172 DHGKPSSIE 180
>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 ERGQPASL 9
E+GQP +L
Sbjct: 236 EKGQPLNL 243
Query: 2 ERGQPASLE 10
+ G+P+S+E
Sbjct: 172 DHGKPSSIE 180
>sp|VP24_MABVA|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 ERGQPASL 9
E+GQP +L
Sbjct: 236 EKGQPLNL 243
Query: 2 ERGQPASLE 10
+ G+P+S+E
Sbjct: 172 DHGKPSSIE 180
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PERGQPASL 9
P RG P +L
Sbjct: 411 PARGNPQTL 419
>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 ERGQPASL 9
E+GQP L
Sbjct: 236 EKGQPLDL 243
Query: 2 ERGQPASLE 10
+ G+P+S+E
Sbjct: 172 DHGKPSSIE 180
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 1 PERGQPASL 9
P+RG P +L
Sbjct: 363 PQRGAPRNL 371
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 PERGQPAS 8
PER PAS
Sbjct: 398 PERRSPAS 405
>sp|US25_HCMVA|UNCHARACTERIZED protein US25|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GQPASL 9
GQPASL
Sbjct: 6 GQPASL 11
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PERGQPA 7
P RG+PA
Sbjct: 754 PARGEPA 760
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PERGQPA 7
P RG+PA
Sbjct: 754 PARGEPA 760
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 2 ERGQPA 7
E GQPA
Sbjct: 565 ENGQPA 570
>sp|ORF32_VZVO|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PERGQPAS 8
P+R QP+S
Sbjct: 128 PDREQPSS 135
>sp|ORF32_VZVD|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PERGQPAS 8
P+R QP+S
Sbjct: 128 PDREQPSS 135
158|Sequence|786|795|PASLEFLPME
>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PASLEFLP 8
PAS++FLP
Sbjct: 112 PASIDFLP 119
>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PASLEFLP 8
PAS++FLP
Sbjct: 112 PASIDFLP 119
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 PASLEFLPM 9
P LEF+P+
Sbjct: 2032 PTRLEFIPL 2040
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 PASLEFLPM 9
P LEF+P+
Sbjct: 2031 PTRLEFIPL 2039
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 PASLEFLPM 9
P LEF+P+
Sbjct: 2031 PTRLEFIPL 2039
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 SLEFLPME 10
SL+F+P+E
Sbjct: 1198 SLQFIPVE 1205
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 SLEFLPME 10
SL+F+P+E
Sbjct: 1197 SLDFIPVE 1204
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 SLEFLPME 10
+LEF+P+E
Sbjct: 1193 ALEFVPVE 1200
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 SLEFLPME 10
SL+F+P+E
Sbjct: 1196 SLDFIPVE 1203
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 SLEFLPME 10
SL+F+P+E
Sbjct: 1194 SLDFVPVE 1201
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 3 SLEFLP 8
SLEFLP
Sbjct: 120 SLEFLP 125
>sp|UL24_HHV7J|PROTEIN UL24 homolog|Human herpesvirus 7 (strain JI)
Query: 3 SLEFLP 8
SLE+LP
Sbjct: 2 SLEYLP 7
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 SLEFLPM 9
SL+FLP+
Sbjct: 1187 SLKFLPL 1193
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 SLEFLPME 10
+L+F+P+E
Sbjct: 1198 ALQFIPVE 1205
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 SLEFLPME 10
+L+F+P+E
Sbjct: 1197 ALQFIPVE 1204
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 SLEFLPME 10
+L+F+P+E
Sbjct: 1200 ALQFIPVE 1207
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 SLEFLPME 10
+L+F+P+E
Sbjct: 1197 ALDFIPVE 1204
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 SLEFLPME 10
+L+F+P+E
Sbjct: 1193 ALDFIPVE 1200
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 SLEFLPME 10
SL+F P+E
Sbjct: 1193 SLDFAPVE 1200
159|Sequence|791|800|FLPMESPTAV
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 LPMESPTAV 10
LPM+S TA+
Sbjct: 1687 LPMKSYTAI 1695
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 FLPMESP 7
F+P ESP
Sbjct: 1189 FIPPESP 1195
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 FLPMESP 7
F+P ESP
Sbjct: 1189 FIPPESP 1195
>sp|VP7_ROTHV|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 FLPMESPTAV 10
+ P E+PT +
Sbjct: 84 YYPSEAPTQI 93
>sp|VP7_ROTHT|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 FLPMESPTAV 10
+ P E+PT +
Sbjct: 84 YYPSEAPTQI 93
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 PMESPTA 9
P+E PT+
Sbjct: 765 PLEQPTS 771
Query: 2 LPMESPTAV 10
+P+ +PT V
Sbjct: 5557 MPLSAPTLV 5565
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LPMESPTA 9
LP E+P A
Sbjct: 1332 LPSEAPNA 1339
Query: 2 LPMESPTAV 10
+P+ +PT V
Sbjct: 5534 MPLSAPTLV 5542
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 PMESPTA 9
P+E PT+
Sbjct: 765 PLEQPTS 771
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 LPMESPTA 9
LP E+P A
Sbjct: 1332 LPSEAPNA 1339
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 1 FLPMESPTAV 10
F P+ P+AV
Sbjct: 136 FTPLVGPSAV 145
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 FLPMESPT 8
LP E+PT
Sbjct: 384 LLPTENPT 391
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 3 PMESPTAV 10
PM PTA+
Sbjct: 427 PMNRPTAL 434
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 1 FLPMESPTA 9
+P ESP A
Sbjct: 153 HIPQESPAA 161
160|Sequence|796|805|SPTAVNGVKD
>sp|BARF1_EBVG|SECRETED protein BARF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SPTAVNG 7
+PTA NG
Sbjct: 167 APTAANG 173
>sp|BARF1_EBVB9|SECRETED protein BARF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SPTAVNG 7
+PTA NG
Sbjct: 167 APTAANG 173
>sp|BARF1_EBVA8|SECRETED protein BARF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SPTAVNG 7
+PTA NG
Sbjct: 167 APTAANG 173
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SPTAVNGVKD 10
SPT + +KD
Sbjct: 226 SPTFIKTIKD 235
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SPTAVNGVKD 10
SPT + +KD
Sbjct: 226 SPTFIKTIKD 235
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 1 SPTAVNGVKD 10
SPT + +KD
Sbjct: 226 SPTFIKTIKD 235
>sp|UL91_HHV6U|PROTEIN U62|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 TAVNGVKD 10
+A+NG+KD
Sbjct: 3 SALNGIKD 10
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 SPTAVNG 7
SPT VNG
Sbjct: 2136 SPTWVNG 2142
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 TAVNGV 8
TAVNGV
Sbjct: 1072 TAVNGV 1077
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 TAVNGV 8
TAVNGV
Sbjct: 1073 TAVNGV 1078
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 SPTAVNGVKD 10
SP A+ ++D
Sbjct: 364 SPVAIEKIRD 373
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 SPTAVNGVKD 10
SP A+ ++D
Sbjct: 364 SPVAIEKIRD 373
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 SPTAVNGVKD 10
SP A+ ++D
Sbjct: 362 SPVAIEKIRD 371
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 SPTAVNGVKD 10
SP A+ ++D
Sbjct: 362 SPVAIEKIRD 371
161|Sequence|801|810|NGVKDPDQAA
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 NGVKDPDQAA 10
NG+K+P A+
Sbjct: 904 NGLKEPMTAS 913
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 GVKDP 6
G+KDP
Sbjct: 2735 GIKDP 2739
162|Sequence|806|815|PDQAASYTVE
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 1 PDQAASYTV 9
PD SYT+
Sbjct: 125 PDNVMSYTI 133
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 PDQAASYTV 9
PD ASY +
Sbjct: 326 PDTPASYLI 334
163|Sequence|811|820|SYTVEPDPRS
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 SYTVEPDPR 9
SY++ PDP+
Sbjct: 1267 SYSLPPDPK 1275
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 5 EPDPRS 10
EP+PRS
Sbjct: 397 EPEPRS 402
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 TVEPDPRS 10
TVE +PRS
Sbjct: 479 TVECEPRS 486
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 5 EPDPRS 10
EP+PRS
Sbjct: 397 EPEPRS 402
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 5 EPDPRS 10
EP+PRS
Sbjct: 397 EPEPRS 402
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 5 EPDPRS 10
EP+PRS
Sbjct: 397 EPEPRS 402
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 5 EPDPRS 10
EP+PRS
Sbjct: 397 EPEPRS 402
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 EPDPR 9
EPDPR
Sbjct: 1033 EPDPR 1037
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 EPDPR 9
EPDPR
Sbjct: 1033 EPDPR 1037
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 EPDPR 9
EPDPR
Sbjct: 1033 EPDPR 1037
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 5 EPDPRS 10
EP+PRS
Sbjct: 397 EPEPRS 402
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 3 TVEPDPR 9
T EP+PR
Sbjct: 121 TCEPNPR 127
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 YTVEPDP 8
YT +PDP
Sbjct: 344 YTWDPDP 350
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 3 TVEPDPR 9
T EP+PR
Sbjct: 130 TCEPNPR 136
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 YTVEPDP 8
Y++EP P
Sbjct: 1771 YSIEPSP 1777
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 YTVEPDP 8
Y++EP P
Sbjct: 1771 YSIEPSP 1777
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 YTVEPDP 8
YT+ PDP
Sbjct: 1265 YTLPPDP 1271
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 3 TVEPDPR 9
T EP+PR
Sbjct: 148 TCEPNPR 154
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 3 TVEPDPR 9
T EP+PR
Sbjct: 148 TCEPNPR 154
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 1 SYTVEPDPR 9
+YT+ P P+
Sbjct: 527 NYTLPPHPQ 535
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 YTVEPDPRS 10
Y+ EP P+S
Sbjct: 1503 YSGEPKPKS 1511
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 5 EPDPRS 10
EP PRS
Sbjct: 397 EPQPRS 402
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 5 EPDPRS 10
EP PRS
Sbjct: 397 EPQPRS 402
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 5 EPDPRS 10
EP PRS
Sbjct: 397 EPKPRS 402
>sp|BALF1_EBVG|APOPTOSIS regulator BALF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SYTVEPDP 8
SYT+ P P
Sbjct: 16 SYTILPRP 23
>sp|BALF1_EBVB9|APOPTOSIS regulator BALF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SYTVEPDP 8
SYT+ P P
Sbjct: 16 SYTILPRP 23
164|Sequence|816|825|PDPRSRHLAL
>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21
Query: 1 PDPRSRHL 8
P P+ RHL
Sbjct: 13 PSPKRRHL 20
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 DPRSRHL 8
DPR++H+
Sbjct: 6908 DPRTKHV 6914
>sp|PG162_VAR67|PROTEIN OPG162|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PDPRSRHL 8
P P +RHL
Sbjct: 83 PRPDTRHL 90
>sp|PG162_VACCC|PROTEIN OPG162|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PDPRSRHL 8
P P +RHL
Sbjct: 83 PRPDTRHL 90
>sp|PG162_MONPV|PROTEIN OPG162|Monkeypox virus (MPXV)
Query: 1 PDPRSRHL 8
P P +RHL
Sbjct: 83 PRPDTRHL 90
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 PRSRH 7
PRSRH
Sbjct: 1043 PRSRH 1047
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PDPRSRHLA 9
P P+ +HLA
Sbjct: 218 PSPQHQHLA 226
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 PDPRSRHL 8
P+P ++HL
Sbjct: 421 PNPTTQHL 428
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 2 DPRSRHL 8
DP+ RH+
Sbjct: 327 DPKYRHV 333
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DPRSRHL 8
DPR+ HL
Sbjct: 545 DPRATHL 551
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DPRSRHL 8
DPR+ HL
Sbjct: 545 DPRATHL 551
>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 PDPRSRH 7
P PR RH
Sbjct: 194 PKPRPRH 200
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 DPRSRHL 8
+ RSRHL
Sbjct: 2950 EERSRHL 2956
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 4 RSRHLAL 10
RSR+LAL
Sbjct: 309 RSRYLAL 315
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DPRSRHLA 9
DP S HLA
Sbjct: 440 DPFSSHLA 447
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 4 RSRHLAL 10
RSR+LAL
Sbjct: 309 RSRYLAL 315
>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PDPRSRHLA 9
P P+ +H+A
Sbjct: 221 PSPQYQHVA 229
165|Sequence|821|830|RHLALSGPTF
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 LALSGPTF 10
L LSGPTF
Sbjct: 2018 LVLSGPTF 2025
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 HLALSGPTF 10
H+AL GP
Sbjct: 640 HIALHGPAL 648
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 RHLALSG 7
RHL+L+G
Sbjct: 537 RHLSLAG 543
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 1 RHLALSG 7
RHL+L+G
Sbjct: 537 RHLSLAG 543
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RHLALSG 7
RHL+L+G
Sbjct: 537 RHLSLAG 543
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RHLALSG 7
RHL+L+G
Sbjct: 537 RHLSLAG 543
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 RHLALSG 7
RHL+L+G
Sbjct: 537 RHLSLAG 543
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 HLALSGPTF 10
H+AL GP
Sbjct: 638 HIALYGPAL 646
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 HLALSGPTF 10
H+AL GP
Sbjct: 639 HIALYGPAL 647
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 HLALSGPTF 10
H+AL GP
Sbjct: 639 HIALYGPAL 647
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 HLALSGPTF 10
H+A+ GP
Sbjct: 640 HIAMHGPAL 648
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 HLALSGPTF 10
H+A+ GP
Sbjct: 640 HIAMHGPAL 648
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 HLALSGPTF 10
H+A+ GP
Sbjct: 640 HIAMHGPAL 648
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 RHLALSGPTF 10
RH L PTF
Sbjct: 2079 RHTFLIHPTF 2088
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 HLALSGPTF 10
H+A+ GP
Sbjct: 640 HIAMHGPAL 648
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 HLALSGPTF 10
H+A+ GP+
Sbjct: 642 HIAVHGPSL 650
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 1 RHLALSGP 8
+HL LS P
Sbjct: 778 KHLDLSNP 785
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 1 RHLALSGP 8
+HL LS P
Sbjct: 778 KHLDLSNP 785
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 HLALSGP 8
H+A+ GP
Sbjct: 645 HIAMHGP 651
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 HLALSGP 8
H+A+ GP
Sbjct: 645 HIAMHGP 651
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 RHLALSGPTF 10
RH L PTF
Sbjct: 2086 RHSFLIHPTF 2095
>sp|SCP_VZVD|SMALL capsomere-interacting protein|Varicella-zoster virus (strain Dumas)
Query: 3 LALSGPTF 10
L +SGPT
Sbjct: 118 LGISGPTI 125
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 HLALSGPT 9
H AL+ PT
Sbjct: 307 HYALTDPT 314
166|Sequence|826|835|SGPTFGIIVK
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 SGPTFGII 8
+GPTF +I
Sbjct: 129 NGPTFAVI 136
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 SGPTFGII 8
+GPTF +I
Sbjct: 129 NGPTFAVI 136
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 1 SGPTFGIIVK 10
+GPT G I K
Sbjct: 45 TGPTMGCIQK 54
>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35
Query: 1 SGPTFGIIVK 10
S PTF ++K
Sbjct: 121 SNPTFAALLK 130
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 SGPTFGIIVK 10
S PTF ++K
Sbjct: 12 SQPTFTYVIK 21
>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 SGPTFGIIVK 10
S PTF ++K
Sbjct: 121 SNPTFAALLK 130
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SGPTFGIIV 9
SGP IIV
Sbjct: 1099 SGPQVNIIV 1107
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SGPTFGIIV 9
SGP IIV
Sbjct: 1097 SGPQVNIIV 1105
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PTFGIIV 9
P+FG+I+
Sbjct: 450 PSFGLIL 456
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PTFGIIV 9
P+FG+I+
Sbjct: 450 PSFGLIL 456
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SGPTFGIIV 9
SGP IIV
Sbjct: 1100 SGPKVNIIV 1108
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SGPTFGIIV 9
SGP IIV
Sbjct: 1100 SGPKVNIIV 1108
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SGPTFGIIV 9
SGP IIV
Sbjct: 1098 SGPKVNIIV 1106
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SGPTFGIIV 9
SGP IIV
Sbjct: 1099 SGPKVNIIV 1107
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GPTFGII 8
GP FG I
Sbjct: 347 GPEFGTI 353
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GPTFGII 8
GP FG I
Sbjct: 347 GPEFGTI 353
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GPTFGII 8
GP FG I
Sbjct: 347 GPEFGTI 353
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GPTFGI 7
GPT G+
Sbjct: 41 GPTLGV 46
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 3 PTFGIIVK 10
PT+G ++K
Sbjct: 304 PTYGGVIK 311
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 3 PTFGIIVK 10
PT+G ++K
Sbjct: 304 PTYGGVIK 311
167|Sequence|831|840|GIIVKHFPKL
>sp|VPR_HV1RH|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP+L
Sbjct: 31 VRHFPRL 37
>sp|VPR_HV1SE|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP+L
Sbjct: 31 VRHFPRL 37
>sp|VPR_HV1Z2|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV1S3|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV1OY|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV1N5|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV1MA|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV1JR|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV1B9|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV1YF|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV1YB|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV1BR|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV1H2|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV1MN|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV1EL|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV1H3|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV1B1|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV112|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV190|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRV 37
>sp|VPR_HV1B5|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV1MV|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPK 9
V+HFP+
Sbjct: 31 VRHFPR 36
>sp|VPR_HV1ET|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPK 9
V+HFP+
Sbjct: 31 VRHFPR 36
>sp|VPR_HV1A2|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPK 9
V+HFP+
Sbjct: 31 VRHFPR 36
>sp|VPR_HV193|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPK 9
V+HFP+
Sbjct: 31 VRHFPR 36
>sp|VPR_HV192|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPK 9
V+HFP+
Sbjct: 31 VRHFPR 36
>sp|VPR_HV1SC|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPKL 10
V+HFP++
Sbjct: 31 VRHFPRI 37
>sp|VPR_HV1MP|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPK 9
V+HFP+
Sbjct: 31 VRHFPR 36
>sp|NSP5_ROTHJ|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 5 KHFPKL 10
KH+PK+
Sbjct: 145 KHYPKI 150
>sp|NSP5_ROTH7|NON-STRUCTURAL protein 5|Rotavirus A (isolate RVA/Human/United
Query: 5 KHFPKL 10
KH+PK+
Sbjct: 145 KHYPKI 150
>sp|NSP5_ROTH3|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 5 KHFPKL 10
KH+PK+
Sbjct: 145 KHYPKI 150
>sp|NSP5_ROT41|NON-STRUCTURAL protein 5|Rotavirus A (isolate
Query: 5 KHFPKL 10
KH+PK+
Sbjct: 145 KHYPKI 150
>sp|VPR_HV1Y2|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPK 9
V+HFP+
Sbjct: 31 VRHFPR 36
>sp|VPR_HV1AN|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPK 9
V+HFP+
Sbjct: 31 VRHFPR 36
>sp|VPR_HV197|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPK 9
V+HFP+
Sbjct: 31 VRHFPR 36
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 GIIVKHFP 8
G+++K FP
Sbjct: 1661 GLLIKSFP 1668
>sp|VPR_HV196|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPK 9
V+HFP+
Sbjct: 31 VRHFPR 36
>sp|VPR_HV1VI|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPK 9
V+HFP+
Sbjct: 31 VRHFPR 36
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 GIIVKHFP 8
G+I KH P
Sbjct: 10 GLIRKHIP 17
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 KHFPKL 10
KHFP L
Sbjct: 2589 KHFPGL 2594
>sp|VPR_HV1S9|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPK 9
V+HFP+
Sbjct: 31 VRHFPR 36
>sp|VPR_HV19N|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPK 9
V+HFP+
Sbjct: 31 VRHFPR 36
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 3 IVKHFPKL 10
I K FPKL
Sbjct: 206 IRKRFPKL 213
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 IVKHFPKL 10
I K FPKL
Sbjct: 206 IRKRFPKL 213
>sp|VPR_HV1M2|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPK 9
V+HFP+
Sbjct: 31 VRHFPR 36
>sp|NP04_HHV2H|NUCLEAR protein UL4|Human herpesvirus 2 (strain HG52)
Query: 1 GIIVKHFP 8
G++++H P
Sbjct: 55 GVVIQHTP 62
>sp|NP04_HHV11|NUCLEAR protein UL4|Human herpesvirus 1 (strain 17)
Query: 1 GIIVKHFP 8
G++++H P
Sbjct: 55 GVVIQHTP 62
>sp|VPR_HV1S2|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 VKHFPK 9
V+HFP+
Sbjct: 31 VRHFPR 36
>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain
Query: 5 KHFPKL 10
KH PKL
Sbjct: 92 KHHPKL 97
>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 KHFPKL 10
KH PKL
Sbjct: 94 KHHPKL 99
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 2 IIVKHF 7
+IV+HF
Sbjct: 306 VIVRHF 311
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 1 GIIVKHFPK 9
GI+ +H+ K
Sbjct: 399 GIMCRHYKK 407
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 1 GIIVKHFPK 9
GI+ +H+ K
Sbjct: 399 GIMCRHYKK 407
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 GIIVKHF 7
GII KH+
Sbjct: 854 GIIFKHW 860
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 GIIVKHF 7
GII KH+
Sbjct: 855 GIIFKHW 861
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 GIIVKHF 7
GII KH+
Sbjct: 854 GIIFKHW 860
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 GIIVKHF 7
GII KH+
Sbjct: 854 GIIFKHW 860
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GIIVKHFPKL 10
G++VKH +
Sbjct: 300 GLVVKHITNI 309
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GIIVKHFPKL 10
G++VKH +
Sbjct: 300 GLVVKHITNI 309
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 IIVKHFPKL 10
+ +KH+P++
Sbjct: 19 LYLKHYPEV 27
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 IIVKHFPKL 10
+ +KH+P++
Sbjct: 19 LYLKHYPEV 27
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 IIVKHFPKL 10
+ +KH+P++
Sbjct: 19 LYLKHYPEV 27
168|Sequence|836|845|HFPKLLPKVL
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 FPKLLPKVL 10
FP LLPK+
Sbjct: 336 FPALLPKLF 344
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 FPKLLPKVL 10
FP LLPK+
Sbjct: 336 FPALLPKLF 344
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 FPKLLPKVL 10
FP LLPK+
Sbjct: 336 FPALLPKLF 344
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FPKLLPKVL 10
FP LLP L
Sbjct: 201 FPNLLPPYL 209
>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)
Query: 2 FPKLLPKVL 10
FP LLP L
Sbjct: 201 FPNLLPPYL 209
>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant
Query: 2 FPKLLPKVL 10
FP LLP L
Sbjct: 201 FPNLLPPYL 209
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 FPKLLPKV 9
FP ++PKV
Sbjct: 327 FPGVIPKV 334
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 HFPKLLPK 8
H P+L+P+
Sbjct: 1950 HSPELMPE 1957
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 HFPKLLPKVL 10
HF K +PK L
Sbjct: 64 HFLKQVPKEL 73
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 HFPKLL 6
H+PK+L
Sbjct: 1620 HYPKML 1625
>sp|PG132_VARV|VIRION morphogenesis protein OPG132|Variola virus
Query: 4 KLLPKVL 10
K+LPK++
Sbjct: 239 KMLPKII 245
>sp|PG132_VAR67|VIRION morphogenesis protein OPG132|Variola virus (isolate
Query: 4 KLLPKVL 10
K+LPK++
Sbjct: 239 KMLPKII 245
>sp|PG132_VACCC|VIRION morphogenesis protein OPG132|Vaccinia virus (strain Copenhagen)
Query: 4 KLLPKVL 10
K+LPK++
Sbjct: 239 KMLPKII 245
>sp|PG132_MONPV|VIRION morphogenesis protein OPG132|Monkeypox virus (MPXV)
Query: 4 KLLPKVL 10
K+LPK++
Sbjct: 239 KMLPKII 245
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 HFPKLLPKVL 10
HF K P V
Sbjct: 171 HFEKKFPSVF 180
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 1 HFPKLLPKVL 10
HF K P V
Sbjct: 170 HFDKKFPSVF 179
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 HFPKLLPKVL 10
HF K P V
Sbjct: 170 HFDKKFPSVF 179
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HFPKLLPKVL 10
HF K P V
Sbjct: 170 HFDKKFPSVF 179
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HFPKLLPKVL 10
HF K P V
Sbjct: 170 HFDKKFPSVF 179
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 1 HFPKLLPKVL 10
HF K P V
Sbjct: 170 HFDKKFPSVF 179
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 1 HFPKLLP 7
HF KL+P
Sbjct: 322 HFRKLVP 328
>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41
Query: 1 HFPKLLPKVL 10
H P L P+V+
Sbjct: 43 HAPALSPEVV 52
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 HFPKLLPKVL 10
H P+ L KVL
Sbjct: 1124 HIPEGLNKVL 1133
169|Sequence|841|850|LPKVLVQGTV
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 LPKVLVQG 8
LP+V+ QG
Sbjct: 2674 LPEVIAQG 2681
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 LPKVLVQG 8
LP+V+ QG
Sbjct: 2674 LPEVIAQG 2681
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 4 VLVQGTV 10
+L+QGTV
Sbjct: 292 LLIQGTV 298
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 LPKVLV 6
LPK+LV
Sbjct: 735 LPKILV 740
170|Sequence|846|855|VQGTVFARMA
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 3 GTVFARMA 10
GT+F +MA
Sbjct: 574 GTIFIKMA 581
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 3 GTVFARMA 10
GT+F +MA
Sbjct: 572 GTIFIKMA 579
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 3 GTVFARMA 10
GT+F +MA
Sbjct: 571 GTIFIKMA 578
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 3 GTVFARMA 10
GT+F +MA
Sbjct: 575 GTIFIKMA 582
>sp|ORF28_HHV8P|PROTEIN ORF28|Human herpesvirus 8 type P
Query: 1 VQGTVFARMA 10
V G+V RMA
Sbjct: 14 VDGSVLVRMA 23
171|Sequence|851|860|FARMAPEQKT
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 FARMAPE 7
+AR+APE
Sbjct: 335 YARLAPE 341
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 FARMAPE 7
+AR+APE
Sbjct: 336 YARLAPE 342
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 FARMAPE 7
+AR+APE
Sbjct: 336 YARLAPE 342
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 1 FARMAPE 7
+AR+APE
Sbjct: 334 YARLAPE 340
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 FARMAPE 7
+AR+APE
Sbjct: 334 YARLAPE 340
>sp|NCAP_SARS|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 1 FARMAPEQ 8
F R PEQ
Sbjct: 275 FGRRGPEQ 282
>sp|NCAP_SARS2|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 1 FARMAPEQ 8
F R PEQ
Sbjct: 274 FGRRGPEQ 281
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 FARMAPE 7
F RM PE
Sbjct: 82 FGRMRPE 88
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 4 MAPEQK 9
MAP+QK
Sbjct: 536 MAPKQK 541
172|Sequence|856|865|PEQKTELVCE
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 3 QKTELVCE 10
QKTE +CE
Sbjct: 80 QKTESICE 87
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PEQKTELV 8
PEQ+TE V
Sbjct: 286 PEQQTETV 293
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 1 PEQKTEL 7
PEQ+TE+
Sbjct: 388 PEQRTEV 394
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 1 PEQKTEL 7
PEQ+TE+
Sbjct: 388 PEQRTEV 394
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 1 PEQKTEL 7
PEQ+TE+
Sbjct: 388 PEQRTEV 394
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 1 PEQKTEL 7
PEQ+TE+
Sbjct: 388 PEQRTEV 394
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 PEQKTELVCE 10
PE LVC+
Sbjct: 1118 PEMSKSLVCD 1127
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 EQKTELVC 9
+Q+TE VC
Sbjct: 1216 KQRTEPVC 1223
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 PEQKTELV 8
PE K EL+
Sbjct: 1376 PENKQELI 1383
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 PEQKTELVCE 10
PE LVC+
Sbjct: 1118 PEMSKGLVCD 1127
173|Sequence|861|870|ELVCELQKLQ
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 ELVCELQKLQ 10
ELV EL+ +Q
Sbjct: 87 ELVAELEGIQ 96
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 3 VCELQK 8
VC+LQK
Sbjct: 420 VCDLQK 425
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 3 VCELQK 8
VC+LQK
Sbjct: 420 VCDLQK 425
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 ELVCELQKLQ 10
ELV EL+ +Q
Sbjct: 87 ELVAELEGIQ 96
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELVCELQK 8
ELV E+QK
Sbjct: 921 ELVAEIQK 928
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 VCELQKL 9
VCELQ +
Sbjct: 1026 VCELQDV 1032
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 LVCELQ 7
L CELQ
Sbjct: 310 LACELQ 315
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELVCELQK 8
EL+ E+QK
Sbjct: 921 ELIAEIQK 928
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELVCELQK 8
EL+ E+QK
Sbjct: 912 ELIAEIQK 919
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ELVCELQK 8
EL+ E+QK
Sbjct: 911 ELIAEVQK 918
174|Sequence|866|875|LQKLQYCVGM
>sp|HBSAG_HBVH3|LARGE envelope protein|Hepatitis B virus genotype H
Query: 1 LQKLQYCVGM 10
+Q +Q+CVG+
Sbjct: 351 VQFVQWCVGL 360
>sp|HBSAG_HBVH2|LARGE envelope protein|Hepatitis B virus genotype H
Query: 1 LQKLQYCVGM 10
+Q +Q+CVG+
Sbjct: 351 VQFVQWCVGL 360
>sp|HBSAG_HBVH1|LARGE envelope protein|Hepatitis B virus genotype H
Query: 1 LQKLQYCVGM 10
+Q +Q+CVG+
Sbjct: 351 VQFVQWCVGL 360
>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 LQKLQYCVGM 10
+Q +Q+CVG+
Sbjct: 351 VQFVQWCVGL 360
>sp|HBSAG_HBVF4|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 LQKLQYCVGM 10
+Q +Q+CVG+
Sbjct: 351 VQFVQWCVGL 360
>sp|HBSAG_HBVF3|LARGE envelope protein|Hepatitis B virus genotype F1
Query: 1 LQKLQYCVGM 10
+Q +Q+CVG+
Sbjct: 351 VQFVQWCVGL 360
>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 LQKLQYCVGM 10
+Q +Q+CVG+
Sbjct: 351 VQFVQWCVGL 360
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 LQKLQYCVG 9
+QK+++C G
Sbjct: 611 IQKIKHCFG 619
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 KLQYC 7
K+QYC
Sbjct: 236 KMQYC 240
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 KLQYC 7
K+QYC
Sbjct: 236 KMQYC 240
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 KLQYC 7
K+QYC
Sbjct: 236 KMQYC 240
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 3 KLQYC 7
K+QYC
Sbjct: 236 KMQYC 240
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 KLQYC 7
K+QYC
Sbjct: 236 KMQYC 240
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 KLQYC 7
K+QYC
Sbjct: 236 KMQYC 240
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 KLQYC 7
K+QYC
Sbjct: 236 KMQYC 240
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 LQKLQYC 7
+QKL++C
Sbjct: 614 VQKLKHC 620
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 6 YCVGM 10
YC GM
Sbjct: 1235 YCTGM 1239
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 4 LQYCVGM 10
LQY VG+
Sbjct: 220 LQYAVGV 226
175|Sequence|871|880|YCVGMCGDGA
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 YCVGMCGDGA 10
YCVG DG
Sbjct: 290 YCVGRADDGG 299
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 CVGMCG 7
C GMCG
Sbjct: 1674 CKGMCG 1679
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 CVGMCG 7
C GMCG
Sbjct: 1665 CKGMCG 1670
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 CVGMCG 7
C GMCG
Sbjct: 1666 CKGMCG 1671
>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain
Query: 1 YCVGMC 6
YC G+C
Sbjct: 92 YCTGLC 97
>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)
Query: 1 YCVGMC 6
YC G+C
Sbjct: 92 YCTGLC 97
>sp|US18_HCMVT|TRANSMEMBRANE protein HWLF5|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 CVGMCGD 8
C G CG+
Sbjct: 125 CTGFCGE 131
>sp|US18_HCMVM|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CVGMCGD 8
C G CG+
Sbjct: 125 CTGFCGE 131
>sp|US18_HCMVA|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CVGMCGD 8
C G CG+
Sbjct: 125 CTGFCGE 131
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 YCVGMCG 7
YCV CG
Sbjct: 638 YCVEQCG 644
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 2 CVGMCGDG 9
CVG DG
Sbjct: 16 CVGQLNDG 23
>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CVGMCG 7
C+G CG
Sbjct: 260 CMGRCG 265
>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P
Query: 5 MCGDGA 10
+CG+GA
Sbjct: 395 LCGNGA 400
>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CVGMCG 7
C+G CG
Sbjct: 261 CMGRCG 266
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 4 GMCGDGA 10
G+C DG+
Sbjct: 735 GICADGS 741
Query: 4 GMCGDG 9
G CG+G
Sbjct: 1107 GFCGNG 1112
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 CVGMCGDGA 10
C+ G+GA
Sbjct: 1848 CIAFIGEGA 1856
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 CVGMCGDGA 10
C+ G+GA
Sbjct: 1848 CIAFIGEGA 1856
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 CVGMCGDGA 10
C+ G+GA
Sbjct: 1848 CIAFIGEGA 1856
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 6 CGDGA 10
CGDG+
Sbjct: 1669 CGDGS 1673
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 6 CGDGA 10
CGDG+
Sbjct: 1669 CGDGS 1673
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 6 CGDGA 10
CGDG+
Sbjct: 1669 CGDGS 1673
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 6 CGDGA 10
CGDG+
Sbjct: 1669 CGDGS 1673
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 6 CGDGA 10
CGDG+
Sbjct: 1669 CGDGS 1673
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 6 CGDGA 10
CGDG+
Sbjct: 1669 CGDGS 1673
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 6 CGDGA 10
CGDG+
Sbjct: 1669 CGDGS 1673
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 6 CGDGA 10
CGDG+
Sbjct: 144 CGDGS 148
>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 CGDGA 10
CGDG+
Sbjct: 144 CGDGS 148
>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)
Query: 6 CGDGA 10
CGDG+
Sbjct: 144 CGDGS 148
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 6 CGDGA 10
CGDG+
Sbjct: 144 CGDGS 148
>sp|E411_ADE12|PROBABLE early E4 11 kDa|Human adenovirus A serotype 12
Query: 1 YCVGMCGDGA 10
YC+ M +GA
Sbjct: 3 YCLRMAVEGA 12
>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)
Query: 5 MCGDGA 10
+CGDGA
Sbjct: 253 VCGDGA 258
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 3 VGMCGDG 9
+G C DG
Sbjct: 789 IGKCSDG 795
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 YCVGMCGDG 9
YC CGDG
Sbjct: 350 YCAD-CGDG 357
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 CGDGA 10
CGDG+
Sbjct: 144 CGDGS 148
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 6 CGDGA 10
CGDG+
Sbjct: 144 CGDGS 148
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 6 CGDGA 10
CGDG+
Sbjct: 144 CGDGS 148
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 6 CGDGA 10
CGDG+
Sbjct: 144 CGDGS 148
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 6 CGDGA 10
CGDG+
Sbjct: 144 CGDGS 148
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 6 CGDGA 10
CGDG+
Sbjct: 144 CGDGS 148
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 3 VGMCGDG 9
+G C DG
Sbjct: 789 IGKCSDG 795
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 YCVGMCGDG 9
YC CGDG
Sbjct: 350 YCAD-CGDG 357
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 6 CGDGA 10
CGDG+
Sbjct: 144 CGDGS 148
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 4 GMCGDGA 10
G+C DG+
Sbjct: 554 GVCADGS 560
Query: 4 GMCGDG 9
G CG+G
Sbjct: 926 GFCGNG 931
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 6 CGDGA 10
CGDG
Sbjct: 55 CGDGG 59
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 CGDG 9
CGDG
Sbjct: 283 CGDG 286
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 CGDG 9
CGDG
Sbjct: 283 CGDG 286
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 6 CGDG 9
CGDG
Sbjct: 793 CGDG 796
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 6 CGDG 9
CGDG
Sbjct: 793 CGDG 796
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 6 CGDG 9
CGDG
Sbjct: 785 CGDG 788
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 6 CGDG 9
CGDG
Sbjct: 778 CGDG 781
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 6 CGDG 9
CGDG
Sbjct: 793 CGDG 796
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 6 CGDG 9
CGDG
Sbjct: 793 CGDG 796
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 6 CGDG 9
CGDG
Sbjct: 793 CGDG 796
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 6 CGDG 9
CGDG
Sbjct: 793 CGDG 796
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 6 CGDG 9
CGDG
Sbjct: 793 CGDG 796
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 6 CGDG 9
CGDG
Sbjct: 793 CGDG 796
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 6 CGDG 9
CGDG
Sbjct: 793 CGDG 796
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 6 CGDG 9
CGDG
Sbjct: 832 CGDG 835
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 CGDG 9
CGDG
Sbjct: 832 CGDG 835
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 2 CVGMCGDGA 10
C G GDG+
Sbjct: 4 CEGTDGDGS 12
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 6 CGDGA 10
CG+GA
Sbjct: 337 CGEGA 341
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 6 CGDGA 10
CG+GA
Sbjct: 336 CGEGA 340
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 6 CGDGA 10
CG+GA
Sbjct: 336 CGEGA 340
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 CGDG 9
CGDG
Sbjct: 832 CGDG 835
>sp|RNB_HHV1M|RNA-BINDING protein|Human herpesvirus 1 (strain MP)
Query: 4 GMCGD 8
G CGD
Sbjct: 56 GQCGD 60
>sp|RNB_HHV11|ACCESSORY factor US11|Human herpesvirus 1 (strain 17)
Query: 4 GMCGD 8
G CGD
Sbjct: 56 GQCGD 60
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 MCGDG 9
+CGDG
Sbjct: 2700 ICGDG 2704
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 5 MCGDG 9
+CGDG
Sbjct: 2700 ICGDG 2704
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 YCVGMCGDG 9
Y VG+ DG
Sbjct: 2106 YVVGVTADG 2114
176|Sequence|876|885|CGDGANDCGA
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 2 GDGANDCG 9
GD AN CG
Sbjct: 174 GDAANHCG 181
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 2 GDGANDCGA 10
G+ NDCG
Sbjct: 152 GEPENDCGG 160
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 GDGANDCGA 10
G+ NDC A
Sbjct: 506 GENENDCDA 514
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GDGANDCGA 10
G+GA CG
Sbjct: 267 GEGATACGG 275
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 GDGANDCGA 10
G+ NDC A
Sbjct: 506 GENENDCDA 514
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GDGANDCGA 10
G+GA CG
Sbjct: 267 GEGATACGG 275
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 GDGANDCGA 10
G+ NDC A
Sbjct: 506 GENENDCDA 514
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 GDGANDCGA 10
G+ NDC A
Sbjct: 506 GENENDCDA 514
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 GDGANDCGA 10
G+ NDC A
Sbjct: 506 GENENDCDA 514
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 CGDGANDCG 9
CG G CG
Sbjct: 772 CGTGCTACG 780
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GDGANDCGA 10
G+GA CG
Sbjct: 267 GEGATACGG 275
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 3 DGANDCG 9
DGA+ CG
Sbjct: 705 DGASVCG 711
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 3 DGAND 7
DGAND
Sbjct: 358 DGAND 362
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 3 DGANDCG 9
DGA +CG
Sbjct: 1079 DGAPECG 1085
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 CGDGANDCG 9
C D ND G
Sbjct: 25 CSDVENDLG 33
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 CGDGANDCG 9
C D ND G
Sbjct: 25 CSDVENDLG 33
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 3 DGANDCG 9
DGA +CG
Sbjct: 1078 DGAPECG 1084
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 DGANDCG 9
DGA +CG
Sbjct: 1089 DGAPECG 1095
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 3 DGANDCG 9
DGA +CG
Sbjct: 1089 DGAPECG 1095
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 GDGANDCG 9
GD AN C
Sbjct: 1682 GDAANFCA 1689
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 DGANDCG 9
DGA +CG
Sbjct: 1089 DGAPECG 1095
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 GDGANDCG 9
GD AN C
Sbjct: 1682 GDAANFCA 1689
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 3 DGANDCG 9
DGA +CG
Sbjct: 1078 DGAPECG 1084
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 3 DGANDCG 9
DGA +CG
Sbjct: 1078 DGAPECG 1084
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 3 DGANDCG 9
DGA +CG
Sbjct: 1089 DGAPECG 1095
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 2 GDGANDCG 9
GD N CG
Sbjct: 417 GDFTNKCG 424
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 2 GDGANDCGA 10
GD DCG+
Sbjct: 515 GDQFFDCGS 523
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 GDGANDCGA 10
GD DCG+
Sbjct: 515 GDQFFDCGS 523
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GDGANDCGA 10
GD DCG+
Sbjct: 515 GDQFFDCGS 523
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 2 GDGANDCGA 10
GD DCG+
Sbjct: 515 GDQFFDCGS 523
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 5 ANDCG 9
AN+CG
Sbjct: 1706 ANECG 1710
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 GDGANDCG 9
GD + CG
Sbjct: 640 GDSSTTCG 647
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 GDGANDCG 9
GD + CG
Sbjct: 640 GDSSTTCG 647
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 GDGANDCG 9
GD + CG
Sbjct: 640 GDSSTTCG 647
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 2 GDGANDCGA 10
GDG C A
Sbjct: 173 GDGEAQCSA 181
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 CGDGANDCGA 10
C D AN C A
Sbjct: 1984 CLDRANFCPA 1993
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 3 DGANDCG 9
+GA CG
Sbjct: 206 EGAQSCG 212
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 CGDGANDC 8
C D AN+C
Sbjct: 412 CWDEANEC 419
177|Sequence|881|890|NDCGALKAAD
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 3 CGALKAAD 10
C AL AAD
Sbjct: 664 CDALDAAD 671
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 1 NDCGALKAAD 10
+D GA+K+ D
Sbjct: 428 SDSGAIKSGD 437
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 DCGALKAA 9
+C A+KAA
Sbjct: 1810 NCDAIKAA 1817
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 2 DCGALKAAD 10
D GA+K+ D
Sbjct: 434 DSGAIKSGD 442
178|Sequence|886|895|LKAADVGISL
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 KAADVGI 8
KAAD+G+
Sbjct: 731 KAADLGV 737
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 KAADVGI 8
KAAD+G+
Sbjct: 731 KAADLGV 737
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 KAADVGI 8
KAAD+G+
Sbjct: 731 KAADLGV 737
>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 LKAADVGISL 10
LKA + GI+L
Sbjct: 48 LKAQNYGINL 57
179|Sequence|891|900|VGISLSQAEA
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 ISLSQAEA 10
+++SQAEA
Sbjct: 745 LTISQAEA 752
180|Sequence|896|905|SQAEASVVSP
***** No hits found ******
181|Sequence|901|910|SVVSPFTSSM
***** No hits found ******
182|Sequence|906|915|FTSSMASIEC
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 FTSSMASIEC 10
F S+AS EC
Sbjct: 230 FVVSIASYEC 239
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 FTSSMASIEC 10
F S+AS EC
Sbjct: 230 FIVSVASYEC 239
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 FTSSMASIEC 10
F S+AS EC
Sbjct: 230 FIVSVASYEC 239
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 FTSSMASIEC 10
F S+AS EC
Sbjct: 230 FIVSVASYEC 239
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 FTSSMASIEC 10
F S+AS EC
Sbjct: 230 FIVSVASYEC 239
>sp|ORF23_TTVV6|PROBABLE protein VP2|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 1 FTSSMASIEC 10
FTS ++C
Sbjct: 165 FTSGTKDVDC 174
183|Sequence|911|920|ASIECVPMVI
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 SIECVPMVI 10
S+EC P VI
Sbjct: 970 SLECDPAVI 978
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 SIECVPMVI 10
S+EC P VI
Sbjct: 970 SLECDPAVI 978
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 SIECVPMVI 10
S+EC P VI
Sbjct: 966 SLECDPAVI 974
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 3 IECVPMV 9
I+C PM+
Sbjct: 605 IQCFPMI 611
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 IECVPMV 9
I+C PM+
Sbjct: 928 IQCFPMI 934
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 IECVPM 8
I CVPM
Sbjct: 276 INCVPM 281
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 3 IECVPMVI 10
I+C PM+I
Sbjct: 551 IKCPPMLI 558
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 IECVPM 8
I CVPM
Sbjct: 275 INCVPM 280
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 IECVPM 8
I CVPM
Sbjct: 275 INCVPM 280
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 ASIECVP 7
A+I CVP
Sbjct: 27 ATITCVP 33
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 ECVPM 8
EC+PM
Sbjct: 230 ECIPM 234
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 ECVPM 8
EC+PM
Sbjct: 230 ECIPM 234
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 3 IECVPMV 9
I+C+P+V
Sbjct: 2035 IDCLPIV 2041
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 3 IECVPMV 9
I+C+P+V
Sbjct: 2036 IDCLPIV 2042
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 ASIECVPMV 9
S+E VP+V
Sbjct: 722 GSVEAVPIV 730
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 4 ECVPMV 9
+C+PMV
Sbjct: 308 DCLPMV 313
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 1 ASIECVPMVI 10
A I+C P+++
Sbjct: 550 ALIKCPPLIV 559
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 2 SIECVPM 8
+I+CVP+
Sbjct: 639 AIKCVPL 645
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 4 ECVPM 8
ECVP+
Sbjct: 398 ECVPL 402
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 3 IECVPMV 9
++C+P+V
Sbjct: 2044 VDCLPIV 2050
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 3 IECVPMVI 10
I+C P++I
Sbjct: 538 IKCPPVII 545
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 3 IECVPMVI 10
I+C P++I
Sbjct: 539 IKCPPVII 546
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 3 IECVPMVI 10
++C P++I
Sbjct: 550 VKCPPLII 557
184|Sequence|916|925|VPMVIREGRC
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 VPMVIREGRC 10
+PM +R GRC
Sbjct: 197 MPMRVRYGRC 206
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 PMVIREGRC 10
PM + GRC
Sbjct: 199 PMYVHYGRC 207
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 VPMVIREGRC 10
VP V+ E +C
Sbjct: 590 VPFVLTEAKC 599
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 PMVIREGR 9
P+V R+GR
Sbjct: 719 PIVARDGR 726
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 VPMVIREGRC 10
VP ++ +G+C
Sbjct: 591 VPFLLADGKC 600
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 VPMVIREGRC 10
VP ++ +G+C
Sbjct: 591 VPFLLADGKC 600
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 VPMVIREGRC 10
VP ++ +G+C
Sbjct: 590 VPFLLADGKC 599
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 VPMVIREGRC 10
VP ++ +G+C
Sbjct: 591 VPFLLADGKC 600
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 VPMVIREGRC 10
VP ++ +G+C
Sbjct: 591 VPFLLADGKC 600
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 PMVIREG 8
P+V++EG
Sbjct: 2078 PLVLKEG 2084
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 PMVIREGR 9
P+V REG+
Sbjct: 1613 PIVNREGK 1620
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 PMVIREGR 9
P+V REG+
Sbjct: 1613 PIVNREGK 1620
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 MVIREGR 9
MVI EGR
Sbjct: 2560 MVIPEGR 2566
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 PMVIREGR 9
P+V REG+
Sbjct: 1612 PIVNREGK 1619
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 VPMVIREGRC 10
V VIR RC
Sbjct: 806 VSRVIRRERC 815
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 VPMVIREGRC 10
V VIR RC
Sbjct: 806 VSRVIRRERC 815
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 MVIREGR 9
MVI EGR
Sbjct: 2560 MVIPEGR 2566
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 MVIREGR 9
MVI EGR
Sbjct: 2560 MVIPEGR 2566
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 MVIREGR 9
MVI EGR
Sbjct: 2560 MVIPEGR 2566
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 VPMVIREGRC 10
VP+ R+G C
Sbjct: 598 VPVKCRQGYC 607
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PMVIREG 8
PM+ R+G
Sbjct: 114 PMIARDG 120
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 PMVIREGRC 10
P++I G C
Sbjct: 1059 PIIIEFGEC 1067
185|Sequence|921|930|REGRCSLDTS
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 1 REGRCSLD 8
+ GRC+LD
Sbjct: 266 QNGRCTLD 273
>sp|MCES_YMTV5|MRNA-CAPPING enzyme small subunit|Yaba monkey tumor virus (strain
Query: 3 GRCSLDTS 10
GRC +DT+
Sbjct: 162 GRCVIDTT 169
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 GRCSLDT 9
GRC LD+
Sbjct: 70 GRCFLDS 76
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 GRCSLDT 9
GRC LD+
Sbjct: 70 GRCFLDS 76
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 3 GRCSLDT 9
GRC LD+
Sbjct: 70 GRCFLDS 76
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 EGRCSLDT 9
EG+C L++
Sbjct: 830 EGKCGLNS 837
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 EGRCSLDT 9
EG+C L++
Sbjct: 830 EGKCGLNS 837
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 EGRCSLDT 9
EG+C L++
Sbjct: 830 EGKCGLNS 837
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 EGRCSLDT 9
EG+C L++
Sbjct: 830 EGKCGLNS 837
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 EGRCSLDT 9
EG+C L++
Sbjct: 830 EGKCGLNS 837
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 EGRCSLDT 9
EG+C L++
Sbjct: 830 EGKCGLNS 837
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 EGRCSLDT 9
EG+C L++
Sbjct: 830 EGKCGLNS 837
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 EGRCSLDT 9
EG+C L++
Sbjct: 830 EGKCGLNS 837
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 EGRCSLDT 9
EG+C L++
Sbjct: 830 EGKCGLNS 837
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 2 EGRCSLDT 9
EG+C L++
Sbjct: 830 EGKCGLNS 837
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 REGRCS 6
REG CS
Sbjct: 664 REGGCS 669
186|Sequence|926|935|SLDTSFSVFK
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 3 DTSFSVFK 10
D SF+VF+
Sbjct: 611 DASFNVFQ 618
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 3 DTSFSVFK 10
D SF+VF+
Sbjct: 611 DASFNVFQ 618
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 SLDTSFSV 8
SLD +FS+
Sbjct: 1463 SLDPTFSI 1470
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 SLDTSFSV 8
SLD +FS+
Sbjct: 1473 SLDPTFSI 1480
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 SLDTSFSV 8
SLD +FS+
Sbjct: 1470 SLDPTFSI 1477
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 SLDTSFSV 8
SLD +FS+
Sbjct: 1471 SLDPTFSI 1478
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 SLDTSFSV 8
SLD +FS+
Sbjct: 1471 SLDPTFSI 1478
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 SLDTSFSV 8
SLD +FS+
Sbjct: 1469 SLDPTFSI 1476
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 SLDTSFSV 8
SLD +FS+
Sbjct: 1470 SLDPTFSI 1477
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 SLDTSFSV 8
SLD +FS+
Sbjct: 1465 SLDPTFSI 1472
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 SLDTSFSV 8
SLD +FS+
Sbjct: 1469 SLDPTFSI 1476
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 SLDTSFSV 8
SLD +FS+
Sbjct: 1465 SLDPTFSI 1472
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 SLDTSFSV 8
SLD +FS+
Sbjct: 1470 SLDPTFSI 1477
187|Sequence|931|940|FSVFKYMALY
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 5 KYMALY 10
KYM LY
Sbjct: 448 KYMGLY 453
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 4 FKYMAL 9
FKY+AL
Sbjct: 1616 FKYLAL 1621
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 4 FKYMAL 9
FKY+AL
Sbjct: 1615 FKYLAL 1620
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 4 FKYMAL 9
FKY+AL
Sbjct: 1615 FKYLAL 1620
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 FKYMALY 10
FKY LY
Sbjct: 873 FKYAVLY 879
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 1 FSVFKYMALY 10
FSV YM+ +
Sbjct: 547 FSVTNYMSYF 556
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 FSVFKYMA 8
FS+FK++A
Sbjct: 2382 FSLFKHVA 2389
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 FSVFKYMA 8
FS+FK++A
Sbjct: 2382 FSLFKHVA 2389
188|Sequence|936|945|YMALYSLTQF
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 MALYSLTQ 9
MALY +TQ
Sbjct: 2615 MALYDITQ 2622
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 MALYSLTQ 9
MALY +TQ
Sbjct: 2615 MALYDITQ 2622
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 MALYSLTQ 9
MALY +TQ
Sbjct: 2615 MALYDITQ 2622
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 MALYSLTQ 9
MALY +TQ
Sbjct: 2619 MALYDITQ 2626
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 MALYSLTQ 9
MALY +TQ
Sbjct: 2601 MALYDVTQ 2608
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 MALYSLTQ 9
MALY +TQ
Sbjct: 2600 MALYDVTQ 2607
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 YMALYSLTQF 10
++ L+SLT F
Sbjct: 6 FLLLFSLTHF 15
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 YMALYS 6
Y+ALYS
Sbjct: 18 YLALYS 23
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 MALYSLTQF 10
MAL +TQF
Sbjct: 1257 MALKLITQF 1265
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 MALYSLTQF 10
MAL +TQF
Sbjct: 1257 MALKLITQF 1265
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 MALYSLTQF 10
MAL +TQF
Sbjct: 1257 MALKLITQF 1265
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 MALYSLTQF 10
MAL +TQF
Sbjct: 1257 MALKLITQF 1265
189|Sequence|941|950|SLTQFISVLI
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 LTQFISVLI 10
+T F SVLI
Sbjct: 2846 MTHFFSVLI 2854
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 LTQFISVLI 10
+T F SVLI
Sbjct: 2846 MTHFFSVLI 2854
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 LTQFISVLI 10
+T F SVLI
Sbjct: 2846 MTHFFSVLI 2854
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SLTQFISVL 9
SLT FI++L
Sbjct: 194 SLTHFINLL 202
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SLTQFISVL 9
SLT FI++L
Sbjct: 194 SLTHFINLL 202
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SLTQFISVL 9
SLT FI++L
Sbjct: 194 SLTHFINLL 202
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 LTQFISVLI 10
+T F S+LI
Sbjct: 2846 MTHFFSILI 2854
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 LTQFISVLI 10
+T F S+LI
Sbjct: 2846 MTHFFSILI 2854
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SLTQFISVLI 10
+ TQF+ VL+
Sbjct: 626 TTTQFMKVLV 635
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SLTQFISVLI 10
+ TQF+ VL+
Sbjct: 626 TTTQFMKVLV 635
>sp|VP30_EBOSU|TRANSCRIPTIONAL activator VP30|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 SLTQFISVLI 10
SLT FIS +
Sbjct: 234 SLTMFISAFL 243
>sp|UL132_HCMVT|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 SLTQFISVLI 10
S+ FI+VLI
Sbjct: 93 SIFSFIAVLI 102
>sp|UL132_HCMVA|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SLTQFISVLI 10
S+ FI+VLI
Sbjct: 93 SIFSFIAVLI 102
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 1 SLTQFISVLI 10
SLT+ I VLI
Sbjct: 617 SLTKMILVLI 626
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 SLTQFISVLI 10
SLT+ I VLI
Sbjct: 619 SLTKMILVLI 628
190|Sequence|946|955|ISVLILYTIN
***** No hits found ******
191|Sequence|951|960|LYTINTNLGD
>sp|VE7_HPV09|PROTEIN E7|Human papillomavirus 9
Query: 1 LYTINTNLG 9
LY + TNLG
Sbjct: 59 LYVLATNLG 67
>sp|NCAP_CVHNL|NUCLEOPROTEIN coronavirus NL63 (HCoV-NL63)
Query: 3 TINTNLGD 10
T+NT+LG+
Sbjct: 108 TVNTSLGN 115
>sp|DUT_VARV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus
Query: 2 YTINTNLGD 10
YT N N GD
Sbjct: 102 YTFNVNTGD 110
>sp|DUT_VAR67|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus (isolate
Query: 2 YTINTNLGD 10
YT N N GD
Sbjct: 102 YTFNVNTGD 110
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 4 INTNLG 9
+NTNLG
Sbjct: 1111 VNTNLG 1116
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 TINTNL 8
TINTNL
Sbjct: 1831 TINTNL 1836
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 LYTINTN 7
+YTIN N
Sbjct: 1502 VYTINQN 1508
>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)
Query: 1 LYTINTNLGD 10
LYT N GD
Sbjct: 146 LYTANFTFGD 155
>sp|CAPSD_HBVG2|CAPSID protein|Hepatitis B virus genotype G
Query: 4 INTNLG 9
+NTNLG
Sbjct: 101 VNTNLG 106
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 LYTINTNLG 9
LY++ N+G
Sbjct: 1614 LYSVKENIG 1622
>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H
Query: 4 INTNLG 9
+NTN+G
Sbjct: 118 VNTNMG 123
>sp|HBEAG_HBVF6|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 4 INTNLG 9
+NTN+G
Sbjct: 118 VNTNMG 123
>sp|HBEAG_HBVF1|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 4 INTNLG 9
+NTN+G
Sbjct: 118 VNTNMG 123
>sp|HBEAG_HBVD6|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 4 INTNLG 9
+NTN+G
Sbjct: 118 VNTNMG 123
>sp|HBEAG_HBVD5|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 4 INTNLG 9
+NTN+G
Sbjct: 118 VNTNMG 123
>sp|HBEAG_HBVD3|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 4 INTNLG 9
+NTN+G
Sbjct: 118 VNTNMG 123
>sp|HBEAG_HBVB1|EXTERNAL core antigen|Hepatitis B virus genotype B1
Query: 4 INTNLG 9
+NTN+G
Sbjct: 118 VNTNMG 123
>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 4 INTNLG 9
+NTN+G
Sbjct: 118 VNTNMG 123
>sp|HBEAG_HBVA7|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 4 INTNLG 9
+NTN+G
Sbjct: 118 VNTNMG 123
>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 4 INTNLG 9
+NTN+G
Sbjct: 118 VNTNMG 123
>sp|HBEAG_HBVA5|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 4 INTNLG 9
+NTN+G
Sbjct: 118 VNTNMG 123
>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 4 INTNLG 9
+NTN+G
Sbjct: 118 VNTNMG 123
>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 4 INTNLG 9
+NTN+G
Sbjct: 118 VNTNMG 123
>sp|CAPSD_HBVD6|CAPSID protein|Hepatitis B virus genotype D
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|CAPSD_HBVD3|CAPSID protein|Hepatitis B virus genotype D
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|CAPSD_HBVD2|CAPSID protein|Hepatitis B virus genotype D
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|CAPSD_HBVB8|CAPSID protein|Hepatitis B virus genotype B1
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|CAPSD_HBVB1|CAPSID protein|Hepatitis B virus genotype B1
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|CAPSD_HBVB7|CAPSID protein|Hepatitis B virus genotype B1
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|CAPSD_HBVA5|CAPSID protein|Hepatitis B virus genotype A1
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|HBEAG_HBVA8|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 4 INTNLG 9
+NTN+G
Sbjct: 118 VNTNMG 123
>sp|CAPSD_HBVA7|CAPSID protein|Hepatitis B virus genotype A2
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|CAPSD_HBVC8|CAPSID protein|Hepatitis B virus genotype C
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|CAPSD_HBVA2|CAPSID protein|Hepatitis B virus genotype A2
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|CAPSD_HBVF6|CAPSID protein|Hepatitis B virus genotype F2
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|CAPSD_HBVF1|CAPSID protein|Hepatitis B virus genotype F2
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)
Query: 1 LYTINTNLGD 10
LYT N GD
Sbjct: 146 LYTANFTFGD 155
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 2 YTINTNLGD 10
+ +NT +GD
Sbjct: 23 FVVNTLMGD 31
>sp|CAPSD_HBVA6|CAPSID protein|Hepatitis B virus genotype A1
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|CAPSD_HBVA4|CAPSID protein|Hepatitis B virus genotype A2
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|CAPSD_HBVA9|CAPSID protein|Hepatitis B virus genotype A3
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 YTINTNL 8
YT+NT L
Sbjct: 1830 YTLNTKL 1836
>sp|CAPSD_HBVH3|CAPSID protein|Hepatitis B virus genotype H
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 2 YTINT 6
YTINT
Sbjct: 130 YTINT 134
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 2 YTINT 6
YTINT
Sbjct: 112 YTINT 116
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 2 YTINT 6
YTINT
Sbjct: 130 YTINT 134
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 2 YTINT 6
YTINT
Sbjct: 130 YTINT 134
>sp|CAPSD_HBVD5|CAPSID protein|Hepatitis B virus genotype D
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|CAPSD_HBVA8|CAPSID protein|Hepatitis B virus genotype A3
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNMG 94
>sp|CAPSD_HBVG1|CAPSID protein|Hepatitis B virus genotype G
Query: 4 INTNLG 9
+NTN+G
Sbjct: 101 VNTNMG 106
>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G
Query: 4 INTNLG 9
+NTN+G
Sbjct: 101 VNTNMG 106
>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 4 INTNLG 9
+NTN+G
Sbjct: 118 VNTNVG 123
>sp|CAPSD_HBVD1|CAPSID protein|Hepatitis B virus genotype D
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNVG 94
>sp|CAPSD_HBVA3|CAPSID protein|Hepatitis B virus genotype A2
Query: 4 INTNLG 9
+NTN+G
Sbjct: 89 VNTNVG 94
192|Sequence|956|965|TNLGDLQFLA
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 2 NLGDLQFL 9
NLGDL+F+
Sbjct: 138 NLGDLKFM 145
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 2 NLGDLQFL 9
NLGDL+F+
Sbjct: 138 NLGDLKFM 145
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 2 NLGDLQFL 9
NLG LQ+L
Sbjct: 337 NLGALQYL 344
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 1 TNLGDLQFL 9
+NLGD F+
Sbjct: 381 SNLGDTAFI 389
>sp|NCAP_MERS1|NUCLEOPROTEIN East respiratory syndrome-related coronavirus
Query: 2 NLGDLQF 8
N GDLQ
Sbjct: 277 NFGDLQL 283
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 TNLGDLQF 8
TN G+L+F
Sbjct: 1109 TNTGNLKF 1116
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 TNLGDLQF 8
TN G+L+F
Sbjct: 1113 TNTGNLKF 1120
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 2 NLGDLQ 7
NLG+LQ
Sbjct: 90 NLGELQ 95
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 2 NLGDLQ 7
NLG+LQ
Sbjct: 90 NLGELQ 95
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate
Query: 2 NLGDLQ 7
NLG+LQ
Sbjct: 90 NLGELQ 95
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 NLGDLQ 7
NLG+LQ
Sbjct: 90 NLGELQ 95
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NLGDLQ 7
NLG+LQ
Sbjct: 90 NLGELQ 95
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 2 NLGDLQ 7
NLG+LQ
Sbjct: 90 NLGELQ 95
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 TNLGDLQFL 9
TNLG+L L
Sbjct: 517 TNLGELPSL 525
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 1 TNLGDLQ 7
TNL DL+
Sbjct: 154 TNLNDLE 160
193|Sequence|961|970|LQFLAIDLVI
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LQFLAIDL 8
LQF+ +DL
Sbjct: 553 LQFVLVDL 560
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LQFLAIDL 8
LQF+ +DL
Sbjct: 553 LQFVLVDL 560
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LQFLAIDL 8
LQF+ +DL
Sbjct: 553 LQFVLVDL 560
194|Sequence|966|975|IDLVITTTVA
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 IDLVITTTVA 10
IDL +T+T+A
Sbjct: 327 IDLELTSTIA 336
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 DLVITTTVA 10
DL+I+TT A
Sbjct: 900 DLLISTTTA 908
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 DLVITTTVA 10
DL+++TT A
Sbjct: 899 DLLVSTTTA 907
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 DLVITTTVA 10
DL+++TT A
Sbjct: 898 DLLVSTTTA 906
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 DLVITTTVA 10
DL+++TT A
Sbjct: 898 DLLVSTTTA 906
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 DLVITTTVA 10
DL+++TT A
Sbjct: 908 DLLVSTTTA 916
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 DLVITTTVA 10
DL+++TT A
Sbjct: 896 DLLVSTTTA 904
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 DLVITTTVA 10
DL+++TT A
Sbjct: 901 DLLVSTTTA 909
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 DLVITTTVA 10
DL+++TT A
Sbjct: 889 DLLVSTTTA 897
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 DLVITTTVA 10
DL+++TT A
Sbjct: 889 DLLVSTTTA 897
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 DLVITTTVA 10
DL+++TT A
Sbjct: 890 DLLVSTTTA 898
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 DLVITTTVA 10
DL+++TT A
Sbjct: 888 DLLVSTTTA 896
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 DLVITTTVA 10
DL+++TT A
Sbjct: 888 DLLVSTTTA 896
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 DLVITTTVA 10
DL+++TT A
Sbjct: 890 DLLVSTTTA 898
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 DLVITTTVA 10
DL+++TT A
Sbjct: 890 DLLVSTTTA 898
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 DLVITTTVA 10
DL+++TT A
Sbjct: 892 DLLVSTTTA 900
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 DLVITTTVA 10
DL+++TT A
Sbjct: 887 DLLVSTTTA 895
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 DLVITTTVA 10
DL+++TT A
Sbjct: 906 DLLVSTTTA 914
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 LVITTTV 9
LVITT+V
Sbjct: 1837 LVITTSV 1843
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 ITTTVA 10
ITTTVA
Sbjct: 1278 ITTTVA 1283
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 ITTTVA 10
ITTTVA
Sbjct: 1278 ITTTVA 1283
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 ITTTVA 10
ITTTVA
Sbjct: 1278 ITTTVA 1283
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 ITTTVA 10
ITTTVA
Sbjct: 1278 ITTTVA 1283
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 ITTTVA 10
ITTTVA
Sbjct: 1278 ITTTVA 1283
195|Sequence|971|980|TTTVAVLMSR
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 TTTVAVLMS 9
TTT+AVL +
Sbjct: 689 TTTIAVLAA 697
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 TTTVAVLMS 9
TTT+AVL +
Sbjct: 689 TTTIAVLAA 697
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 TTTVAVLMS 9
TTT+AVL +
Sbjct: 689 TTTIAVLAA 697
196|Sequence|976|985|VLMSRTGPAL
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 MSRTGPA 9
++RTGPA
Sbjct: 333 VTRTGPA 339
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 LMSRTGP 8
+MS TGP
Sbjct: 1217 IMSLTGP 1223
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 LMSRTGP 8
+MS TGP
Sbjct: 1217 IMSLTGP 1223
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 LMSRTGP 8
+MS TGP
Sbjct: 1217 IMSLTGP 1223
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 LMSRTGP 8
+MS TGP
Sbjct: 1217 IMSLTGP 1223
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 LMSRTGP 8
+MS TGP
Sbjct: 1217 IMSLTGP 1223
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 LMSRTGP 8
+MS TGP
Sbjct: 1217 IMSLTGP 1223
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 LMSRTGP 8
+MS TGP
Sbjct: 1218 IMSLTGP 1224
197|Sequence|981|990|TGPALVLGRV
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 1 TGPALVLGRV 10
T PA++ GRV
Sbjct: 232 TMPAILAGRV 241
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 TGPALVLGRV 10
TGPA GR+
Sbjct: 589 TGPAQCYGRL 598
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 TGPALVLGRV 10
TGPA GR+
Sbjct: 586 TGPAQCYGRL 595
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 ALVLGRV 10
ALV+GR+
Sbjct: 989 ALVIGRI 995
198|Sequence|986|995|VLGRVRPPGA
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 LGRVRPP 8
+G+V+PP
Sbjct: 5466 IGKVKPP 5472
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 VLGRVRPPGA 10
+GR RPP A
Sbjct: 747 CIGRSRPPSA 756
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 GRVRPP 8
G+V+PP
Sbjct: 5140 GKVKPP 5145
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 GRVRPP 8
G+V+PP
Sbjct: 5505 GKVKPP 5510
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 GRVRPP 8
G+V+PP
Sbjct: 5525 GKVKPP 5530
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 GRVRPP 8
G+V+PP
Sbjct: 5555 GKVKPP 5560
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 3 GRVRPPGA 10
GR+ PP A
Sbjct: 1222 GRITPPPA 1229
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 3 GRVRPPGA 10
GR+ PP A
Sbjct: 1222 GRITPPPA 1229
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 VLGRVRPPGA 10
VLG +PP A
Sbjct: 149 VLGVHKPPAA 158
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LGRVRPPGA 10
LG+ PPG
Sbjct: 439 LGKYWPPGG 447
>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12
Query: 5 VRPPGA 10
VRPP A
Sbjct: 432 VRPPAA 437
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 3 GRVRPP 8
GR+ PP
Sbjct: 1223 GRITPP 1228
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 3 GRVRPPG 9
GR+ PPG
Sbjct: 64 GRLAPPG 70
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LGRVRPPGA 10
LG+ PPG
Sbjct: 439 LGKYWPPGG 447
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VLGRVRPPG 9
+ G RPPG
Sbjct: 439 ISGYARPPG 447
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VLGRVRPPG 9
+ G RPPG
Sbjct: 439 ISGYARPPG 447
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VLGRVRPPG 9
+ G RPPG
Sbjct: 439 ISGYARPPG 447
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 4 RVRPP 8
RVRPP
Sbjct: 445 RVRPP 449
199|Sequence|991|1000|RPPGALLSVP
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 3 PGALLSVP 10
PGAL+ VP
Sbjct: 901 PGALVEVP 908
>sp|NS1_I56A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 PPGALLSVP 10
P G + SVP
Sbjct: 77 PKGTITSVP 85
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 2 PPGALLSVP 10
PP +LS+P
Sbjct: 281 PPATVLSLP 289
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 2 PPGALLSVP 10
PP +LS+P
Sbjct: 281 PPATVLSLP 289
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 2 PPGALLSV 9
PPGA++ +
Sbjct: 459 PPGAVVRI 466
200|Sequence|996|1005|LLSVPVLSSL
>sp|UL65_HCMVA|UNCHARACTERIZED protein UL65|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LSVPVLSS 9
LSVP LSS
Sbjct: 7 LSVPSLSS 14
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 2 LSVPVLSS 9
LSVP++S+
Sbjct: 173 LSVPIVSA 180
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 LSVPVLSSL 10
L++PV SSL
Sbjct: 2178 LALPVYSSL 2186
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 2 LSVPVLSS 9
LSVP LSS
Sbjct: 78 LSVPSLSS 85
201|Sequence|1001|1010|VLSSLLLQMV
***** No hits found ******
202|Sequence|1006|1015|LLQMVLVTGV
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 5 VLVTGV 10
VLVTGV
Sbjct: 132 VLVTGV 137
203|Sequence|1011|1020|LVTGVQLGGY
>sp|VP2_NVN68|MINOR capsid protein VP2|Norovirus (strain Human/NoV/United
Query: 1 LVTGVQLGG 9
L G+Q+GG
Sbjct: 18 LGAGIQVGG 26
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 LVTGVQLGG 9
L +G+++GG
Sbjct: 1196 LPSGIEIGG 1204
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 LVTGVQLGG 9
L +G+++GG
Sbjct: 1196 LPSGIEIGG 1204
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 VTGVQLGG 9
+TG +LGG
Sbjct: 709 LTGPELGG 716
204|Sequence|1016|1025|QLGGYFLTLA
>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain
Query: 2 LGGYFLTL 9
+GG+FLTL
Sbjct: 265 MGGFFLTL 272
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 2 LGGYFLTL 9
+GG+FLTL
Sbjct: 266 MGGFFLTL 273
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 4 GYFLTLA 10
GY LTLA
Sbjct: 285 GYMLTLA 291
>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)
Query: 4 GYFLTLA 10
GY LTLA
Sbjct: 285 GYMLTLA 291
>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)
Query: 4 GYFLTLA 10
GY LTLA
Sbjct: 285 GYMLTLA 291
>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)
Query: 4 GYFLTLA 10
GY LTLA
Sbjct: 285 GYMLTLA 291
>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann
Query: 4 GYFLTLA 10
GY LTLA
Sbjct: 285 GYMLTLA 291
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LGGYF 6
LGGYF
Sbjct: 1044 LGGYF 1048
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 QLGGYFLTLA 10
QLG F TLA
Sbjct: 1147 QLGDDFSTLA 1156
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 QLGGYFLTLA 10
QLG F TLA
Sbjct: 1147 QLGDDFSTLA 1156
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 3 GGYFLTLA 10
G YF TLA
Sbjct: 363 GKYFETLA 370
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 3 GGYFLTLA 10
G YF TLA
Sbjct: 363 GKYFETLA 370
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 GGYFLTLA 10
G YF TLA
Sbjct: 363 GKYFETLA 370
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GGYFLTLA 10
G YF TLA
Sbjct: 363 GKYFETLA 370
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 GGYFLTLA 10
G YF TLA
Sbjct: 355 GKYFETLA 362
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 3 GGYFLTLA 10
G YF TLA
Sbjct: 363 GKYFETLA 370
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 3 GGYFLTLA 10
G YF TLA
Sbjct: 363 GKYFETLA 370
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 3 GGYFLTLA 10
G YF TLA
Sbjct: 363 GKYFETLA 370
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 3 GGYFLTLA 10
G YF TLA
Sbjct: 363 GKYFETLA 370
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 GYFLTL 9
GY+LTL
Sbjct: 1493 GYWLTL 1498
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 4 GYFLTL 9
GY+LTL
Sbjct: 1422 GYWLTL 1427
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 GYFLTL 9
GY+LTL
Sbjct: 1494 GYWLTL 1499
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 GYFLTL 9
GY+LTL
Sbjct: 1494 GYWLTL 1499
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 GYFLTL 9
GY+LTL
Sbjct: 1494 GYWLTL 1499
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 GYFLTL 9
GY+LTL
Sbjct: 1494 GYWLTL 1499
>sp|US20_HCMVT|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 LGGYFLTLA 10
+G Y +TLA
Sbjct: 204 VGSYVMTLA 212
>sp|US20_HCMVA|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LGGYFLTLA 10
+G Y +TLA
Sbjct: 204 VGSYVMTLA 212
205|Sequence|1021|1030|FLTLAQPWFV
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 FLTLAQPW 8
F+TL Q W
Sbjct: 203 FVTLNQSW 210
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 1 FLTLAQPW 8
F+TL Q W
Sbjct: 203 FVTLNQSW 210
>sp|MATRX_MEASB|MATRIX protein|Measles virus (strain Biken) (MeV)
Query: 2 LTLAQPW 8
LTL PW
Sbjct: 119 LTLPTPW 125
>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 LTLAQPW 8
LTL PW
Sbjct: 119 LTLLTPW 125
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 1 FLTLAQPWF 9
LTL P+F
Sbjct: 41 LLTLGHPYF 49
>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)
Query: 2 LTLAQPW 8
LTL PW
Sbjct: 119 LTLLTPW 125
>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)
Query: 2 LTLAQPW 8
LTL PW
Sbjct: 119 LTLLTPW 125
>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 LTLAQPW 8
LTL PW
Sbjct: 119 LTLLTPW 125
>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)
Query: 2 LTLAQPW 8
LTL PW
Sbjct: 119 LTLLTPW 125
>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 LTLAQPW 8
LTL PW
Sbjct: 119 LTLLTPW 125
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 1 FLTLAQPWF 9
F+T +P+F
Sbjct: 173 FITTKEPYF 181
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FLTLAQPWF 9
F+T +P+F
Sbjct: 173 FITTKEPYF 181
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 1 FLTLAQPWF 9
F+T +P+F
Sbjct: 173 FITTKEPYF 181
>sp|VU25_HHV6Z|PROTEIN U25|Human herpesvirus 6B (strain Z29)
Query: 3 TLAQPW 8
TLA PW
Sbjct: 23 TLALPW 28
>sp|VU25_HHV6H|PROTEIN U25|Human herpesvirus 6B (HHV-6 variant
Query: 3 TLAQPW 8
TLA PW
Sbjct: 23 TLALPW 28
>sp|VU25_HHV6U|PROTEIN U25|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 TLAQPW 8
TLA PW
Sbjct: 23 TLALPW 28
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 1 FLTLAQPWF 9
LTL P+F
Sbjct: 42 LLTLGHPYF 50
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 2 LTLAQPWFV 10
L + QPW V
Sbjct: 340 LRMMQPWNV 348
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LTLAQPW 8
L L QPW
Sbjct: 461 LQLDQPW 467
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 FLTLAQPWFV 10
FLT + W +
Sbjct: 1558 FLTFVKEWII 1567
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 FLTLAQPWFV 10
FLT + W +
Sbjct: 1558 FLTFVKEWII 1567
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 FLTLAQPWFV 10
L QPW +
Sbjct: 5719 LLRKGQPWLI 5728
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 FLTLAQP 7
FLT+ QP
Sbjct: 2226 FLTVLQP 2232
206|Sequence|1026|1035|QPWFVPLNRT
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 WFVPLNRT 10
WFV NRT
Sbjct: 3468 WFVKPNRT 3475
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 WFVPLNRT 10
WFV NRT
Sbjct: 3468 WFVKPNRT 3475
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 QPWFVPLN 8
Q W VPLN
Sbjct: 1665 QYWRVPLN 1672
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 QPWFVPLNRT 10
QP+FVP T
Sbjct: 2074 QPFFVPTKIT 2083
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 QPWFVP 6
QP+FVP
Sbjct: 2074 QPFFVP 2079
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 QPWFVP 6
QP+F+P
Sbjct: 223 QPYFIP 228
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 3 WFVPLNRT 10
W VP N+T
Sbjct: 166 WAVPKNKT 173
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 3 WFVPLNRT 10
W VP N+T
Sbjct: 166 WAVPKNKT 173
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 QPWFVPLNRT 10
+PW VP+ T
Sbjct: 21 RPWQVPMQPT 30
>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PWFVPL 7
PWF P+
Sbjct: 608 PWFPPM 613
>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain
Query: 3 WFVPL 7
W++PL
Sbjct: 308 WYIPL 312
>sp|EBNA1_EBVA8|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PWFVPL 7
PWF P+
Sbjct: 608 PWFPPM 613
>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PWFVPL 7
PWF P+
Sbjct: 608 PWFPPM 613
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 QPWFVP 6
QP+++P
Sbjct: 223 QPYYIP 228
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 QPWFVP 6
QP+++P
Sbjct: 223 QPYYIP 228
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 PWFVPLN 8
PW PLN
Sbjct: 624 PWGTPLN 630
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 QPWFVPL 7
+PW VP+
Sbjct: 21 RPWRVPM 27
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 QPWFVPLNRT 10
QP ++P N+T
Sbjct: 646 QPVYLPENQT 655
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 QPWFVPLNRT 10
QP ++P N+T
Sbjct: 646 QPVYLPENQT 655
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 QPWFVPLNRT 10
QP ++P N+T
Sbjct: 646 QPVYLPENQT 655
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 QPWFVPLNRT 10
QP ++P N+T
Sbjct: 646 QPVYLPENQT 655
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 PWFVPLN 8
PW PLN
Sbjct: 563 PWGPPLN 569
>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PWFVPL 7
PW VP+
Sbjct: 135 PWIVPM 140
>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PWFVPL 7
PW VP+
Sbjct: 135 PWIVPM 140
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 QPWFVPL 7
+PW VP+
Sbjct: 21 RPWRVPM 27
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 QPWFVPLNRT 10
QP ++P N+T
Sbjct: 644 QPVYLPENQT 653
>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)
Query: 3 WFVPLNRT 10
W +P N+T
Sbjct: 169 WAIPKNKT 176
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 PWFVPLN 8
PW PLN
Sbjct: 690 PWGFPLN 696
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 QPWFVPLNRT 10
QP ++P N+T
Sbjct: 646 QPVYLPENQT 655
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 PWFVPL 7
P+F+PL
Sbjct: 1479 PYFLPL 1484
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QPWFVPLN 8
Q W PLN
Sbjct: 858 QVWIPPLN 865
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QPWFVPLN 8
Q W PLN
Sbjct: 858 QVWIPPLN 865
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QPWFVPLN 8
Q W PLN
Sbjct: 858 QVWIPPLN 865
207|Sequence|1031|1040|PLNRTVAAPD
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 1 PLNRTVAAPD 10
PL +T A PD
Sbjct: 1001 PLGQTTAVPD 1010
>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 PLNRTVAAPD 10
P N+ +APD
Sbjct: 147 PQNQRPSAPD 156
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 LNRTVAA 8
+NRTVA+
Sbjct: 2446 MNRTVAS 2452
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 LNRTVAA 8
+NRTVA+
Sbjct: 2446 MNRTVAS 2452
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 LNRTVAA 8
+NRTVA+
Sbjct: 2446 MNRTVAS 2452
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 LNRTVAA 8
+NRTVA+
Sbjct: 2446 MNRTVAS 2452
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 NRTVAAPD 10
N+T APD
Sbjct: 1243 NQTSVAPD 1250
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 2 LNRTVAAP 9
LN+T+ AP
Sbjct: 452 LNKTLTAP 459
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 PLNRTVAAPD 10
P N+TV P+
Sbjct: 2195 PANKTVEFPE 2204
208|Sequence|1036|1045|VAAPDNLPNY
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 3 APDNLPNY 10
+P+NLPNY
Sbjct: 277 SPENLPNY 284
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 5 DNLPNY 10
DNLPNY
Sbjct: 238 DNLPNY 243
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PDNLPNY 10
P N+PNY
Sbjct: 171 PGNVPNY 177
>sp|US32_HCMVM|PROTEIN US32|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PDNLPNY 10
P NLP Y
Sbjct: 131 PRNLPGY 137
>sp|US32_HCMVA|UNCHARACTERIZED protein HHRF7|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PDNLPNY 10
P NLP Y
Sbjct: 131 PRNLPGY 137
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 4 PDNLPNY 10
PDN P +
Sbjct: 551 PDNTPQF 557
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 AAPDNLPNY 10
AAP+ L NY
Sbjct: 254 AAPETLRNY 262
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 4 PDNLPNY 10
PDN P +
Sbjct: 550 PDNTPEF 556
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 4 PDNLPNY 10
PDN P +
Sbjct: 552 PDNTPEF 558
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 APDNLPN 9
+ DNLPN
Sbjct: 282 SKDNLPN 288
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 APDNLPN 9
+ DNLPN
Sbjct: 284 SKDNLPN 290
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 APDNLPN 9
+ DNLPN
Sbjct: 284 SKDNLPN 290
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 3 APDNLPN 9
+ DNLPN
Sbjct: 284 SKDNLPN 290
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 4 PDNLP 8
PDNLP
Sbjct: 1985 PDNLP 1989
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 APDNLPN 9
+ DNLPN
Sbjct: 284 SKDNLPN 290
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 APDNLPNY 10
AP PNY
Sbjct: 2071 APSPAPNY 2078
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 4 PDNLPN 9
PDN P+
Sbjct: 215 PDNFPS 220
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PDNLPNY 10
P N+P+Y
Sbjct: 177 PGNVPSY 183
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 3 APDNLPN 9
+ DNLPN
Sbjct: 284 SKDNLPN 290
209|Sequence|1041|1050|NLPNYENTVV
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 1 NLPNYE 6
NLPNY+
Sbjct: 239 NLPNYK 244
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 LPNYEN 7
+PNYEN
Sbjct: 2179 IPNYEN 2184
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 LPNYEN 7
+PNYEN
Sbjct: 2179 IPNYEN 2184
>sp|US32_HCMVM|PROTEIN US32|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NLPNYEN 7
NLP YE+
Sbjct: 133 NLPGYEH 139
>sp|US32_HCMVA|UNCHARACTERIZED protein HHRF7|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NLPNYEN 7
NLP YE+
Sbjct: 133 NLPGYEH 139
>sp|UL24_HHV6Z|PROTEIN UL24 homolog|Human herpesvirus 6B (strain Z29)
Query: 1 NLPNYEN 7
++PNY N
Sbjct: 187 SIPNYTN 193
>sp|UL24_HHV6U|PROTEIN UL24 homolog|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 NLPNYEN 7
++PNY N
Sbjct: 187 SIPNYTN 193
>sp|UL24_HHV6G|PROTEIN UL24 homolog|Human herpesvirus 6A (strain GS)
Query: 1 NLPNYEN 7
++PNY N
Sbjct: 187 SIPNYTN 193
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 LPNYEN 7
+PN+EN
Sbjct: 2179 IPNFEN 2184
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 1 NLPNYENTVV 10
N P + TVV
Sbjct: 508 NWPTFSTTVV 517
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 NLPNYENTVV 10
+L YE+T+V
Sbjct: 3415 SLRRYEDTIV 3424
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 NLPNYENT 8
N P+YE++
Sbjct: 468 NYPDYEDS 475
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 1 NLPNYENT 8
N P+YE++
Sbjct: 468 NYPDYEDS 475
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 LPNYEN 7
+PN+EN
Sbjct: 2179 IPNFEN 2184
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 PNYENT 8
PN+ NT
Sbjct: 1405 PNFNNT 1410
>sp|HBSAG_HBVC3|LARGE envelope protein|Hepatitis B virus genotype C
Query: 3 PNYENT 8
PN ENT
Sbjct: 173 PNMENT 178
210|Sequence|1046|1055|ENTVVFSLSS
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ENTVVFSLSS 10
E VVF LSS
Sbjct: 96 ERQVVFLLSS 105
211|Sequence|1051|1060|FSLSSFQYLI
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 SLSSFQYL 9
++SSFQ+L
Sbjct: 39 TMSSFQFL 46
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain
Query: 2 SLSSFQYL 9
++SSFQ+L
Sbjct: 39 TMSSFQFL 46
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 3 LSSFQYLI 10
++S+QYLI
Sbjct: 214 MTSYQYLI 221
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 3 LSSFQYLI 10
++S+QYLI
Sbjct: 213 MTSYQYLI 220
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 2 SLSSFQYLI 10
S +S+QYLI
Sbjct: 221 SQTSYQYLI 229
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 2 SLSSFQYLI 10
S +S+QYLI
Sbjct: 221 SQTSYQYLI 229
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FSLSSFQY 8
+SLS F Y
Sbjct: 292 YSLSDFTY 299
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FSLSSFQY 8
+SLS F Y
Sbjct: 292 YSLSDFTY 299
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 2 SLSSFQYL 9
SLS F Y+
Sbjct: 56 SLSGFSYM 63
>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 SLSSFQYL 9
SLS F Y+
Sbjct: 56 SLSGFSYM 63
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 2 SLSSFQYL 9
SLS F Y+
Sbjct: 56 SLSGFSYM 63
212|Sequence|1056|1065|FQYLILAAAV
>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 FQYLILAAAV 10
QYL LAA +
Sbjct: 145 LQYLALAALI 154
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 FQYLILAAAV 10
QYL LAA +
Sbjct: 145 LQYLALAALI 154
>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 FQYLILAAAV 10
QYL LAA +
Sbjct: 145 LQYLALAALI 154
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 FQYLILAAAV 10
QYL LAA +
Sbjct: 145 LQYLALAALI 154
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 FQYLILAAAV 10
QYL LAA +
Sbjct: 145 LQYLALAALI 154
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 FQYLILAAAV 10
QYL LAA +
Sbjct: 145 LQYLALAALI 154
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 FQYLILAAAV 10
QYL LAA +
Sbjct: 145 LQYLALAALI 154
>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 FQYLILAAAV 10
QYL LAA +
Sbjct: 145 LQYLALAALI 154
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 FQYLILAAAV 10
QYL LAA +
Sbjct: 145 LQYLALAALI 154
>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 FQYLILAA 8
QYL LAA
Sbjct: 145 LQYLALAA 152
>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 FQYLILAA 8
QYL LAA
Sbjct: 145 LQYLALAA 152
>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 FQYLILAA 8
QYL LAA
Sbjct: 145 LQYLALAA 152
>sp|U91_HHV6Z|PROTEIN U91|Human herpesvirus 6B (strain Z29)
Query: 4 LILAAAV 10
LILAAA+
Sbjct: 25 LILAAAI 31
213|Sequence|1061|1070|LAAAVSKGAP
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 LAAAVSKGAP 10
+ VSKGAP
Sbjct: 605 MQVKVSKGAP 614
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 LAAAVSKG 8
L AAV+KG
Sbjct: 625 LTAAVNKG 632
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 LAAAVSKG 8
L AAV+KG
Sbjct: 625 LTAAVNKG 632
214|Sequence|1066|1075|SKGAPFRRPL
>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P
Query: 2 KGAPFRRP 9
+GAP RRP
Sbjct: 21 EGAPRRRP 28
>sp|UL136_HCMVT|PROTEIN UL136|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 GAPFRRPL 10
G P RRPL
Sbjct: 136 GDPARRPL 143
>sp|UL136_HCMVM|PROTEIN UL136|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GAPFRRPL 10
G P RRPL
Sbjct: 136 GDPARRPL 143
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 4 APFRRP 9
APFR+P
Sbjct: 63 APFRQP 68
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 SKGAPFRRP 9
+KG ++RP
Sbjct: 772 AKGPDYKRP 780
>sp|X_HBVA8|PROTEIN X|Hepatitis B virus genotype A3
Query: 1 SKGAPFRRPL 10
S+G PF PL
Sbjct: 25 SRGRPFSGPL 34
>sp|X_HBVD6|PROTEIN X|Hepatitis B virus genotype D
Query: 1 SKGAPFRRPL 10
S+G PF PL
Sbjct: 25 SRGRPFSGPL 34
>sp|X_HBVD2|PROTEIN X|Hepatitis B virus genotype D
Query: 1 SKGAPFRRPL 10
S+G PF PL
Sbjct: 25 SRGRPFSGPL 34
>sp|X_HBVC7|PROTEIN X|Hepatitis B virus genotype C
Query: 1 SKGAPFRRPL 10
S+G PF PL
Sbjct: 25 SRGRPFSGPL 34
>sp|X_HBVD5|PROTEIN X|Hepatitis B virus genotype D
Query: 1 SKGAPFRRPL 10
S+G PF PL
Sbjct: 25 SRGRPFSGPL 34
215|Sequence|1071|1080|FRRPLYTNVP
>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9
Query: 1 FRRPLYTNVP 10
RPLYT P
Sbjct: 332 LSRPLYTETP 341
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FRRPLYTNVP 10
F+R LYT P
Sbjct: 262 FQRSLYTREP 271
>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)
Query: 5 LYTNVP 10
+YTNVP
Sbjct: 56 MYTNVP 61
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FRRPLYTNVP 10
F+R LYT P
Sbjct: 262 FQRSLYTREP 271
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FRRPLYTNVP 10
F+R LYT P
Sbjct: 261 FQRSLYTREP 270
>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RRPLYTNVP 10
R+P YT +P
Sbjct: 274 RKPRYTRLP 282
>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain
Query: 5 LYTNVP 10
+YTNVP
Sbjct: 56 MYTNVP 61
>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49
Query: 1 FRRPLYTNVP 10
RPLY+ P
Sbjct: 326 LSRPLYSETP 335
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 RPLYTNV 9
RPL+TN+
Sbjct: 338 RPLWTNL 344
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 1 FRRPLYTNV 9
+RP Y N+
Sbjct: 2 LKRPAYYNI 10
>sp|MCES_YMTV5|MRNA-CAPPING enzyme small subunit|Yaba monkey tumor virus (strain
Query: 4 PLYTNVP 10
P Y N+P
Sbjct: 17 PFYDNLP 23
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 1 FRRPLYTNV 9
FR +TN+
Sbjct: 119 FRNKFFTNI 127
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 1 FRRPLYTNV 9
FR +TN+
Sbjct: 119 FRNKFFTNI 127
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 1 FRRPLYTNV 9
FR P YT++
Sbjct: 210 FRSPSYTDM 218
>sp|VE2_HPV35|REGULATORY protein E2|Human papillomavirus 35
Query: 5 LYTNVP 10
LYT VP
Sbjct: 102 LYTTVP 107
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FRRPLYTNV 9
FR +TN+
Sbjct: 119 FRNKFFTNI 127
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 3 RPLYTNVP 10
RP + N+P
Sbjct: 136 RPYHYNIP 143
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 1 FRRPLYTNV 9
FR +TN+
Sbjct: 119 FRNKFFTNI 127
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 FRRPLYTNV 9
FR +TN+
Sbjct: 119 FRNKFFTNI 127
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 FRRPLYTNVP 10
FR+ +T+VP
Sbjct: 590 FRQVCHTSVP 599
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 FRRPLYTNVP 10
FR+ +T VP
Sbjct: 599 FRQVCHTTVP 608
>sp|TR14_HCMVA|PROTEIN TRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RRPLYTNVP 10
++P YT +P
Sbjct: 167 KKPHYTKLP 175
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 FRRPLYTNVP 10
FR+ +T VP
Sbjct: 589 FRQVCHTTVP 598
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 FRRPLYTNVP 10
FR+ +T VP
Sbjct: 593 FRQVCHTTVP 602
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 FRRPLYTNVP 10
FR+ +T VP
Sbjct: 593 FRQVCHTTVP 602
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 FRRPLYTNVP 10
FR+ +T VP
Sbjct: 591 FRQVCHTTVP 600
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 FRRPLYTNVP 10
FR+ +T VP
Sbjct: 590 FRQVCHTTVP 599
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 FRRPLYTNVP 10
FR+ +T VP
Sbjct: 602 FRQVCHTTVP 611
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 FRRPLYTNVP 10
FR+ +T VP
Sbjct: 597 FRQVCHTTVP 606
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 FRRPLYTNVP 10
FR+ +T VP
Sbjct: 598 FRQVCHTTVP 607
216|Sequence|1076|1085|YTNVPFLVAL
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 4 VPFLVAL 10
VPFL+AL
Sbjct: 452 VPFLIAL 458
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 1 YTNVPFLV 8
Y N+PF++
Sbjct: 379 YKNLPFMI 386
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 3 NVPFLV 8
N+PFL+
Sbjct: 335 NIPFLI 340
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 NVPFLVA 9
NVPFL+
Sbjct: 1882 NVPFLIC 1888
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 NVPFLVA 9
NVPFL+
Sbjct: 1832 NVPFLIC 1838
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 NVPFLVA 9
NVPFL+
Sbjct: 1852 NVPFLIC 1858
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 NVPFLVA 9
NVPFL+
Sbjct: 1852 NVPFLIC 1858
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 NVPFLVA 9
NVPFL+
Sbjct: 1832 NVPFLIC 1838
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 NVPFLVA 9
NVPFL+
Sbjct: 1882 NVPFLIC 1888
>sp|VIE3_HCMVT|30 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 1 YTNVPFLV 8
Y N+PF +
Sbjct: 209 YKNLPFTI 216
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 NVPFLVA 9
N+P+LVA
Sbjct: 1582 NLPYLVA 1588
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 NVPFLVA 9
N+P+LVA
Sbjct: 1582 NLPYLVA 1588
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 1 YTNVPFLVA 9
Y NV F+VA
Sbjct: 491 YVNVHFVVA 499
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 1 YTNVPFLV 8
Y N+PF +
Sbjct: 209 YKNLPFTI 216
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 1 YTNVPFLV 8
Y N+PF +
Sbjct: 378 YKNLPFTI 385
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 1 YTNVPFLV 8
Y N+PF +
Sbjct: 379 YKNLPFTI 386
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 4 VPFLVAL 10
VPFL++L
Sbjct: 733 VPFLLSL 739
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 4 VPFLVAL 10
VPFL++L
Sbjct: 733 VPFLLSL 739
>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain
Query: 1 YTNVPFLVA 9
Y NV F++A
Sbjct: 492 YVNVYFIIA 500
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 VPFLVAL 10
VPFL++L
Sbjct: 733 VPFLLSL 739
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 NVPFLVA 9
N P+LVA
Sbjct: 1582 NFPYLVA 1588
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 4 VPFLVAL 10
VPFL++L
Sbjct: 733 VPFLLSL 739
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 NVPFLVA 9
N P+LVA
Sbjct: 1586 NFPYLVA 1592
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 NVPFLVA 9
N P+LVA
Sbjct: 1582 NFPYLVA 1588
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 NVPFLVA 9
N P+LVA
Sbjct: 1582 NFPYLVA 1588
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 NVPFLVA 9
N P+LVA
Sbjct: 1582 NFPYLVA 1588
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 NVPFLVA 9
N P+LVA
Sbjct: 1582 NFPYLVA 1588
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 NVPFLVA 9
N P+LVA
Sbjct: 1582 NFPYLVA 1588
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 NVPFLVA 9
N P+LVA
Sbjct: 1582 NFPYLVA 1588
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 NVPFLVA 9
N P+LVA
Sbjct: 1583 NFPYLVA 1589
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 NVPFLVA 9
N P+LVA
Sbjct: 1582 NFPYLVA 1588
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 NVPFLVA 9
N P+LVA
Sbjct: 1582 NFPYLVA 1588
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 NVPFLVA 9
N P+LVA
Sbjct: 1583 NFPYLVA 1589
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 NVPFLVA 9
N P+LVA
Sbjct: 1582 NFPYLVA 1588
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 1 YTNVPFLV 8
Y N+PF V
Sbjct: 67 YGNIPFAV 74
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 NVPFLVA 9
N P+LVA
Sbjct: 1582 NFPYLVA 1588
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 YTNVPFLVAL 10
Y N+ F+V L
Sbjct: 405 YQNINFIVFL 414
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 YTNVPFLVAL 10
Y N+ F+V L
Sbjct: 405 YQNINFIVFL 414
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 NVPFLVA 9
+VPFL+A
Sbjct: 589 HVPFLLA 595
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 NVPFLVA 9
+VPFL+A
Sbjct: 590 HVPFLLA 596
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 NVPFLVA 9
+VPFL+A
Sbjct: 590 HVPFLLA 596
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 NVPFLVA 9
+VPFL+A
Sbjct: 590 HVPFLLA 596
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YTNVPFLV 8
Y N+PF V
Sbjct: 67 YGNIPFAV 74
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 NVPFLVA 9
+VPFL+A
Sbjct: 590 HVPFLLA 596
217|Sequence|1081|1090|FLVALALLSS
***** No hits found ******
218|Sequence|1086|1095|ALLSSVLVGL
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 1 ALLSSVLVGL 10
ALLSS+L GL
Sbjct: 614 ALLSSILQGL 623
219|Sequence|1091|1100|VLVGLVLVPG
>sp|VE4_HPV47|PROTEIN E4|Human papillomavirus 47
Query: 5 LVLVPG 10
LVLVPG
Sbjct: 107 LVLVPG 112
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 2 LVGLVLVPG 10
L GLV+ PG
Sbjct: 656 LCGLVVFPG 664
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 VGLVLVPG 10
+GL L PG
Sbjct: 359 IGLSLTPG 366
>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 VGLVLVPG 10
+GL VPG
Sbjct: 469 LGLFFVPG 476
>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)
Query: 3 VGLVLVPG 10
+GL VPG
Sbjct: 469 LGLFFVPG 476
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 3 VGLVLVPG 10
+GL VPG
Sbjct: 469 LGLFFVPG 476
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 LVGLVLVP 9
++GL LVP
Sbjct: 194 ILGLFLVP 201
220|Sequence|1096|1105|VLVPGLLQGP
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PGLLQGP 10
PGLL GP
Sbjct: 286 PGLLNGP 292
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 LVPGLL 7
LVPG+L
Sbjct: 5215 LVPGML 5220
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LVPGLLQGP 10
+VP + +GP
Sbjct: 98 MVPPIFEGP 106
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LVPGLLQGP 10
+VP + +GP
Sbjct: 98 MVPPIFEGP 106
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LVPGLLQGP 10
+VP + +GP
Sbjct: 98 MVPPIFEGP 106
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 4 PGLLQGP 10
PG L+GP
Sbjct: 165 PGRLRGP 171
221|Sequence|1101|1110|LLQGPLALRN
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 LLQGPLAL 8
LLQGP L
Sbjct: 1393 LLQGPFYL 1400
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 LQGPLAL 8
L GPLAL
Sbjct: 768 LTGPLAL 774
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 LQGPLAL 8
+QGP+A+
Sbjct: 1933 MQGPIAI 1939
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 2 LQGPLA 7
+QGPLA
Sbjct: 217 IQGPLA 222
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 LQGPLAL 8
L GPLAL
Sbjct: 1368 LLGPLAL 1374
222|Sequence|1106|1115|LALRNITDTG
>sp|ORF4B_MERS1|NON-STRUCTURAL protein ORF4b|Middle East respiratory syndrome-related coronavirus
Query: 1 LALRNITD 8
LAL N+TD
Sbjct: 97 LALLNLTD 104
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LALRNITD 8
LAL NI+D
Sbjct: 40 LALENISD 47
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LALRNITD 8
LAL NI+D
Sbjct: 40 LALENISD 47
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 LRNITD 8
L+NITD
Sbjct: 889 LKNITD 894
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LALRNITD 8
LAL NI+D
Sbjct: 40 LALENISD 47
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 3 LRNITD 8
L+NITD
Sbjct: 364 LKNITD 369
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 LRNITD 8
+RN+TD
Sbjct: 270 IRNVTD 275
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LRNITD 8
+RN+TD
Sbjct: 270 IRNVTD 275
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 3 LRNITDT 9
L+NI+DT
Sbjct: 521 LQNISDT 527
223|Sequence|1111|1120|ITDTGFKLLL
>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ITDTGFKLLL 10
+ D GF+LL+
Sbjct: 278 LPDNGFQLLI 287
>sp|PP71_HCMVA|PROTEIN pp71|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ITDTGFKLLL 10
+ D GF+LL+
Sbjct: 278 LPDNGFQLLI 287
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 TDTGFKLLL 10
TD+ FKL++
Sbjct: 526 TDSKFKLII 534
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 2 TDTGFKLL 9
T+T FKLL
Sbjct: 509 TNTQFKLL 516
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 2 TDTGFKLL 9
T+T FKLL
Sbjct: 509 TNTQFKLL 516
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 ITDTGFKLL 9
+TD GF L+
Sbjct: 2010 LTDQGFTLI 2018
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 ITDTGFKLL 9
+TD GF L+
Sbjct: 2010 LTDQGFTLI 2018
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 1 ITDTGFKLLL 10
+TDT +LLL
Sbjct: 96 LTDTSAELLL 105
>sp|SPI2_CWPXB|SERINE proteinase inhibitor 2|Cowpox virus (strain Brighton Red)
Query: 1 ITDTGFK 7
+TDT FK
Sbjct: 214 LTDTNFK 220
>sp|SPI2_MONPV|SERINE proteinase inhibitor 2|Monkeypox virus (MPXV)
Query: 1 ITDTGFK 7
+TDT FK
Sbjct: 217 LTDTNFK 223
>sp|SPI2B_VACCC|PUTATIVE serine proteinase inhibitor 2|Vaccinia virus (strain Copenhagen)
Query: 1 ITDTGFK 7
+TDT FK
Sbjct: 94 LTDTNFK 100
>sp|SPI2_VARV|SERINE proteinase inhibitor 2|Variola virus
Query: 1 ITDTGFK 7
+TDT FK
Sbjct: 217 LTDTNFK 223
>sp|SPI2_VAR67|SERINE proteinase inhibitor 2|Variola virus (isolate
Query: 1 ITDTGFK 7
+TDT FK
Sbjct: 217 LTDTNFK 223
224|Sequence|1116|1125|FKLLLLGLVT
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KLLLLGLVT 10
KLL LGL+T
Sbjct: 31 KLLPLGLIT 39
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 2 KLLLLGLVT 10
KLL LGL+T
Sbjct: 100 KLLPLGLIT 108
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KLLLLGLVT 10
KLL LGL+T
Sbjct: 100 KLLPLGLIT 108
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 LLLLGLVT 10
LL+LGL+T
Sbjct: 821 LLVLGLIT 828
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 FKLLLLGLV 9
FKL++ GLV
Sbjct: 5378 FKLVMNGLV 5386
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 KLLLLGLVT 10
KLL L +VT
Sbjct: 245 KLLALAMVT 253
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 FKLLLLGLV 9
FKL++ G+V
Sbjct: 5466 FKLVMNGMV 5474
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LLLLGLVT 10
L+L+G+VT
Sbjct: 479 LVLVGIVT 486
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LLLLGLVT 10
L+L+G+VT
Sbjct: 759 LVLVGIVT 766
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LLLLGLVT 10
L+L+G+VT
Sbjct: 759 LVLVGIVT 766
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 LLLLGLVT 10
L+L+G+VT
Sbjct: 759 LVLVGIVT 766
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LLLLGLVT 10
L+L+G+VT
Sbjct: 759 LVLVGIVT 766
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LLLLGLVT 10
L+L+G+VT
Sbjct: 759 LVLVGIVT 766
225|Sequence|1121|1130|LGLVTLNFVG
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 LGLVTLNFVG 10
+G +TLNF G
Sbjct: 300 VGQLTLNFTG 309
>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 VTLNFVG 10
VTLNF G
Sbjct: 117 VTLNFTG 123
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 GLVTLNFV 9
GLV+ NF+
Sbjct: 183 GLVSFNFL 190
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 2 GLVTLNFV 9
GLV+ NF+
Sbjct: 183 GLVSFNFL 190
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 2 GLVTLNFV 9
GLV+ NF+
Sbjct: 182 GLVSFNFL 189
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 2 GLVTLNFV 9
GLV+ NF+
Sbjct: 182 GLVSFNFL 189
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 2 GLVTLNF 8
GL+T NF
Sbjct: 41 GLITFNF 47
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 GLVTLNF 8
GL+TLN
Sbjct: 521 GLITLNL 527
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GLVTLNF 8
GL+TLN
Sbjct: 527 GLITLNL 533
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GLVTLNF 8
GL+TLN
Sbjct: 525 GLITLNL 531
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 5 TLNFVG 10
TLNF+G
Sbjct: 592 TLNFMG 597
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 5 TLNFVG 10
TLNF+G
Sbjct: 592 TLNFMG 597
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 5 TLNFVG 10
+LNFVG
Sbjct: 483 SLNFVG 488
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 GLVTLNFVG 10
GLVT+N G
Sbjct: 812 GLVTINDFG 820
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 5 TLNFVG 10
+LNFVG
Sbjct: 483 SLNFVG 488
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 LGLVTLNFV 9
L LVT N+V
Sbjct: 101 LNLVTRNYV 109
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 GLVTLN 7
GLVT+N
Sbjct: 526 GLVTMN 531
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 2 GLVTLN 7
GLVT+N
Sbjct: 526 GLVTMN 531
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LGLVTLN 7
LGL+TL+
Sbjct: 35 LGLITLS 41
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 LGLVTLN 7
LGL+TL+
Sbjct: 104 LGLITLS 110
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LGLVTLN 7
LGL+TL+
Sbjct: 104 LGLITLS 110
226|Sequence|1126|1135|LNFVGAFMLE
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 LNFVGAFML 9
LNFVG F++
Sbjct: 484 LNFVGEFVV 492
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 1 LNFVGAFML 9
LNFVG F++
Sbjct: 484 LNFVGEFVV 492
>sp|TEG3_HHV2H|TEGUMENT protein UL14|Human herpesvirus 2 (strain HG52)
Query: 3 FVGAFM 8
FVGAFM
Sbjct: 43 FVGAFM 48
>sp|TEG3_HHV11|TEGUMENT protein UL14|Human herpesvirus 1 (strain 17)
Query: 3 FVGAFM 8
FVGAFM
Sbjct: 43 FVGAFM 48
>sp|U23_HHV6Z|PROTEIN U23|Human herpesvirus 6B (strain Z29)
Query: 1 LNFVGAFML 9
++FVGAF++
Sbjct: 254 ISFVGAFII 262
>sp|U23_HHV6U|GLYCOPROTEIN U23|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LNFVGAFML 9
++F+GAF++
Sbjct: 191 ISFIGAFVI 199
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LNFVGAFMLE 10
LNF G +LE
Sbjct: 309 LNFDGELLLE 318
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 LNFVGAFML 9
+NF+ A+ML
Sbjct: 452 MNFLIAYML 460
>sp|ORF58_HHV8P|PROTEIN ORF58|Human herpesvirus 8 type P
Query: 1 LNFVGAFML 9
L F GAFM+
Sbjct: 139 LGFCGAFMV 147
227|Sequence|1131|1140|AFMLESVLDQ
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 2 FMLESVLDQ 10
F+L S+LD+
Sbjct: 29 FLLRSILDE 37
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 MLESVLDQ 10
ML++ LDQ
Sbjct: 339 MLDAALDQ 346
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 MLESVLDQ 10
ML++ LDQ
Sbjct: 339 MLDAALDQ 346
228|Sequence|1136|1145|SVLDQCLPAC
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 6 CLPAC 10
CLPAC
Sbjct: 275 CLPAC 279
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VLDQCLPA 9
VLDQ LPA
Sbjct: 559 VLDQLLPA 566
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 VLDQCLP 8
VLD+C P
Sbjct: 1536 VLDRCYP 1542
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 SVLDQCLPAC 10
+V+D+C+ C
Sbjct: 2162 TVIDKCIHIC 2171
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 SVLDQCLPAC 10
+V+D+C+ C
Sbjct: 2162 TVIDKCIHIC 2171
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 4 DQCLPAC 10
D+C P C
Sbjct: 313 DRCPPTC 319
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 4 DQCLPAC 10
D+C P C
Sbjct: 313 DRCPPTC 319
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 4 DQCLPAC 10
D+C P C
Sbjct: 317 DRCPPTC 323
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 4 DQCLPAC 10
D+C P C
Sbjct: 317 DRCPPTC 323
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 4 DQCLPAC 10
D+C P C
Sbjct: 317 DRCPPTC 323
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 4 DQCLPAC 10
D+C P C
Sbjct: 317 DRCPPTC 323
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 4 DQCLPAC 10
D+C P C
Sbjct: 317 DRCPPTC 323
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 4 DQCLPAC 10
D+C P C
Sbjct: 274 DRCPPTC 280
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 4 DQCLPAC 10
D+C P C
Sbjct: 313 DRCPPTC 319
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 4 DQCLPAC 10
D+C P C
Sbjct: 313 DRCPPTC 319
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 6 CLPAC 10
CLP C
Sbjct: 275 CLPTC 279
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 1 SVLDQCLPAC 10
++LD PAC
Sbjct: 517 ALLDDATPAC 526
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 2 VLDQCL 7
VLD+CL
Sbjct: 114 VLDECL 119
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 3 LDQCLP 8
LDQC P
Sbjct: 530 LDQCGP 535
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VLDQCLPAC 10
+LD+ +P C
Sbjct: 125 LLDKGIPTC 133
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 2 VLDQCLPAC 10
+LD+ +P C
Sbjct: 125 LLDKGIPTC 133
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 2 VLDQCLPAC 10
VLD+ + AC
Sbjct: 222 VLDEAIKAC 230
>sp|VIE3_HCMVT|30 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 2 VLDQCLPAC 10
VLD+ + AC
Sbjct: 222 VLDEAIKAC 230
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 6 CLPAC 10
C+P C
Sbjct: 441 CIPCC 445
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 6 CLPAC 10
C+P C
Sbjct: 436 CIPCC 440
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 2 VLDQCLPAC 10
VLD+ + AC
Sbjct: 391 VLDEAIKAC 399
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 2 VLDQCLPAC 10
VLD+ + AC
Sbjct: 392 VLDEAIKAC 400
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 2 VLDQCL 7
VLD+CL
Sbjct: 114 VLDECL 119
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 2 VLDQCL 7
VLD+CL
Sbjct: 114 VLDECL 119
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 5 QCLPAC 10
+CL AC
Sbjct: 567 ECLAAC 572
229|Sequence|1141|1150|CLPACLRRLR
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|UNG_EBVB9|URACIL-DNA glycosylase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 ACLRRLR 10
AC+RRLR
Sbjct: 53 ACVRRLR 59
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 1 CLPACL 6
CLPAC+
Sbjct: 275 CLPACV 280
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 1 CLPACLRRLR 10
CLP CLR +
Sbjct: 437 CLPKCLRTVE 446
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LPACLRRLR 10
L ACLRR+R
Sbjct: 606 LTACLRRMR 614
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 1 CLPACLR 7
C PAC R
Sbjct: 427 CNPACSR 433
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 CLPACLRRLR 10
CL A +RR R
Sbjct: 114 CLTATVRRER 123
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 1 CLPACLRRLR 10
CL A +RR R
Sbjct: 114 CLTATVRRER 123
>sp|K81_HHV8P|PROTEIN K8.1|Human herpesvirus 8 type P
Query: 1 CLPACLRR 8
C+P C R+
Sbjct: 216 CVPRCRRK 223
>sp|PG067_MONPV|PROTEIN OPG067|Monkeypox virus (MPXV)
Query: 1 CLPACL 6
C P CL
Sbjct: 112 CFPICL 117
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 ACLRRL 9
ACLR+L
Sbjct: 2912 ACLRKL 2917
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 ACLRRL 9
ACLR+L
Sbjct: 2914 ACLRKL 2919
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LPACL 6
LPACL
Sbjct: 250 LPACL 254
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 2 LPACL 6
LPACL
Sbjct: 250 LPACL 254
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 2 LPACL 6
LPACL
Sbjct: 250 LPACL 254
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 CLPACL 6
CLP CL
Sbjct: 574 CLPPCL 579
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 CLPACL 6
CLP CL
Sbjct: 574 CLPPCL 579
230|Sequence|1146|1155|LRRLRPKRAS
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LRRLRP 6
LRRLRP
Sbjct: 24 LRRLRP 29
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LRRLRP 6
LRRLRP
Sbjct: 24 LRRLRP 29
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RLRPKRAS 10
R RP+RAS
Sbjct: 822 RKRPRRAS 829
>sp|LF2_EBVG|PROTEIN LF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LRRLRP 6
LRRLRP
Sbjct: 24 LRRLRP 29
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LRRLRPKRAS 10
RR+R RAS
Sbjct: 271 FRRIRGPRAS 280
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LRRLRPKRAS 10
RR+R RAS
Sbjct: 271 FRRIRGPRAS 280
231|Sequence|1151|1160|PKRASKKRFK
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 1 PKRASKKRF 9
P+RASK+R
Sbjct: 97 PERASKRRL 105
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 PKRASKKR 8
PKR KKR
Sbjct: 1099 PKRLRKKR 1106
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 PKRASKKR 8
PKR KKR
Sbjct: 1099 PKRLRKKR 1106
>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b
Query: 1 PKRASKKRFK 10
PKR KKR K
Sbjct: 106 PKRCFKKRGK 115
>sp|VE2_HPV6A|REGULATORY protein E2|Human papillomavirus type 6a
Query: 1 PKRASKKRFK 10
PKR KKR K
Sbjct: 106 PKRCFKKRGK 115
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 1 PKRASK 6
P+RASK
Sbjct: 15 PRRASK 20
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 PKRASK 6
P+RASK
Sbjct: 15 PRRASK 20
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 1 PKRASKKRF 9
P+R SK+R
Sbjct: 103 PERHSKRRL 111
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 1 PKRASKKRF 9
P+R SK+R
Sbjct: 101 PERNSKRRL 109
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 1 PKRASKKRF 9
P+R SK+R
Sbjct: 112 PQRQSKRRL 120
232|Sequence|1156|1165|KKRFKQLERE
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 1 KKRFKQLERE 10
K +F+QLER+
Sbjct: 396 KGKFEQLERK 405
>sp|GM_HHV6Z|ENVELOPE glycoprotein M|Human herpesvirus 6B (strain Z29)
Query: 1 KKRFKQL 7
K+R+KQL
Sbjct: 325 KRRYKQL 331
>sp|GM_HHV6U|ENVELOPE glycoprotein M|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KKRFKQL 7
K+R+KQL
Sbjct: 325 KRRYKQL 331
>sp|UNG_HHV6Z|URACIL-DNA glycosylase|Human herpesvirus 6B (strain Z29)
Query: 1 KKRFKQLER 9
K FK+LER
Sbjct: 118 KNIFKELER 126
>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KKRFKQLER 9
K FK+LER
Sbjct: 118 KNIFKELER 126
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 KKRFKQ 6
KKRFK+
Sbjct: 389 KKRFKE 394
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 KKRFKQ 6
KKRFK+
Sbjct: 389 KKRFKE 394
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 KKRFKQ 6
KKRFK+
Sbjct: 389 KKRFKE 394
>sp|VU51_HHV7J|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 7 (strain JI)
Query: 2 KRFKQLERE 10
KRF LER+
Sbjct: 189 KRFLFLERD 197
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 3 RFKQLER 9
RF++LER
Sbjct: 591 RFRELER 597
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 KKRFKQLER 9
K RF +LER
Sbjct: 123 KSRFGRLER 131
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 1 KKRFKQLER 9
K RF +LER
Sbjct: 123 KSRFGRLER 131
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 1 KKRFKQLER 9
K RF +LER
Sbjct: 123 KSRFGRLER 131
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 KKRFKQLER 9
K RF +LER
Sbjct: 123 KSRFGRLER 131
233|Sequence|1161|1170|QLERELAEQP
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 QLERELAEQP 10
Q+E+++AE P
Sbjct: 1198 QVEQKIAEIP 1207
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 QLERELAEQP 10
Q+E+++AE P
Sbjct: 1198 QVEQKIAEIP 1207
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 RELAEQP 10
RELA++P
Sbjct: 631 RELADEP 637
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 2 LERELAEQP 10
L ELAE P
Sbjct: 949 LRSELAEHP 957
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LERELAEQP 10
+ R+LA++P
Sbjct: 630 ITRQLADEP 638
234|Sequence|1166|1180|LAEQPWPPLPAGPLR
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LAEQPWPPLPAGPLR 15
L+ Q PP+P GP R
Sbjct: 716 LSLQTRPPVPRGPDR 730
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 4 QPWPPLPAGP 13
P PP+PAGP
Sbjct: 769 DPVPPIPAGP 778
>sp|UL132_HCMVM|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 8 PLPAGPLR 15
P P GPLR
Sbjct: 2 PAPRGPLR 9
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 AEQPWPPLPAG 12
A PW +PAG
Sbjct: 1481 AWTPWAIIPAG 1491
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 5 PWPPLPA 11
P PP+P+
Sbjct: 28 PQPPIPS 34
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 PWPPLPA 11
P PP+P+
Sbjct: 28 PQPPIPS 34
>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21
Query: 7 PPLPA 11
PPLPA
Sbjct: 31 PPLPA 35
>sp|VE6_HPV14|PROTEIN E6|Human papillomavirus 14
Query: 7 PPLPA 11
PPLPA
Sbjct: 34 PPLPA 38
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 EQPWPPLP 10
++PW P P
Sbjct: 798 DRPWLPSP 805
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 EQPWPPLP 10
++PW P P
Sbjct: 798 DRPWLPSP 805
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LAEQPWPPLPAGPLR 15
L+ Q P+P GP R
Sbjct: 715 LSFQTHLPIPRGPDR 729
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LAEQPWPPLPAGPLR 15
L+ Q P+P GP R
Sbjct: 715 LSFQTHLPIPRGPDR 729
>sp|M1_I85A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I56A3|MATRIX protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I36A0|MATRIX protein 1|Influenza A virus (strain A/Henry/1936
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I34A1|MATRIX protein 1|Influenza A virus (strain A/Puerto
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I06A0|MATRIX protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I05A1|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I03A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I03A0|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I02A7|MATRIX protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 13 IPSGPLK 19
>sp|M1_I02A6|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I02A5|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I01A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I01A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I01A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I00A0|MATRIX protein 1|Influenza A virus (strain A/Duck/Hong
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I000X|MATRIX protein 1|Influenza A virus (strain A/X-31
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I000F|MATRIX protein 1|Influenza A virus (strain A/Chicken/Weybridge
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19
Query: 7 PPLPA 11
PPLPA
Sbjct: 26 PPLPA 30
>sp|M1_I97A1|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I97A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I60A0|MATRIX protein 1|Influenza A virus (strain A/Ann
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I02A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I57A1|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 9 LPAGPLR 15
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 2 AEQPWPPLPAGP 13
A+ P PPL A P
Sbjct: 621 ADVPLPPLQANP 632
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 4 QPWPP 8
Q WPP
Sbjct: 442 QTWPP 446
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 4 QPWPP 8
Q WPP
Sbjct: 442 QTWPP 446
>sp|VE6_HPV20|PROTEIN E6|Human papillomavirus 20
Query: 7 PPLPA 11
PPLPA
Sbjct: 28 PPLPA 32
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 4 QPWPP 8
Q WPP
Sbjct: 442 QTWPP 446
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 4 QPWPP 8
Q WPP
Sbjct: 443 QTWPP 447
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 4 QPWPP 8
Q WPP
Sbjct: 442 QTWPP 446
>sp|US20_HCMVT|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 7 PPLPAGP 13
PP PA P
Sbjct: 27 PPSPAAP 33
>sp|US20_HCMVA|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 7 PPLPAGP 13
PP PA P
Sbjct: 27 PPSPAAP 33
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 4 QPWPP 8
Q WPP
Sbjct: 442 QTWPP 446
>sp|VE6_HPV25|PROTEIN E6|Human papillomavirus 25
Query: 7 PPLPA 11
PPLPA
Sbjct: 21 PPLPA 25
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 4 QPWPP 8
Q WPP
Sbjct: 442 QTWPP 446
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 4 QPWPP 8
Q WPP
Sbjct: 442 QTWPP 446
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 4 QPWPP 8
Q WPP
Sbjct: 442 QTWPP 446
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 4 QPWPP 8
Q WPP
Sbjct: 442 QTWPP 446
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 AEQPWPPLPA 11
+ QP P+PA
Sbjct: 1750 SNQPTKPIPA 1759
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 4 QPWPPLPAGPL 14
QP P L GPL
Sbjct: 397 QPQPDLDLGPL 407
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 4 QPWPP 8
Q WPP
Sbjct: 442 QTWPP 446
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 4 QPWPP 8
Q WPP
Sbjct: 443 QTWPP 447
>sp|MC014_MCV1|PROTEIN MC014|Molluscum contagiosum virus subtype 1
Query: 6 WPPLPAG 12
W P+PAG
Sbjct: 23 WEPVPAG 29
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LAEQPWPPLPAGP 13
L+ Q P+P GP
Sbjct: 705 LSFQTLLPVPRGP 717
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 EQPWPP 8
E+PW P
Sbjct: 27 ERPWSP 32
>sp|U148D_HCMVM|PROTEIN UL148D|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 EQPWPP 8
EQPW P
Sbjct: 18 EQPWWP 23
>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)
Query: 2 AEQPWPPLP 10
+EQPW +P
Sbjct: 32 SEQPWKVIP 40
>sp|IR02_HCMVA|UNCHARACTERIZED protein IRL2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PWPPLPAGP 13
P PP+P+ P
Sbjct: 48 PRPPIPSTP 56
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 9 LPAGPLR 15
LP GPLR
Sbjct: 102 LPEGPLR 108
>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 PWPPLPA 11
PW P P+
Sbjct: 148 PWVPRPS 154
235|Sequence|1171|1180|WPPLPAGPLR
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PPLPAGPLR 10
PP+P GP R
Sbjct: 722 PPVPRGPDR 730
>sp|UL132_HCMVM|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PLPAGPLR 10
P P GPLR
Sbjct: 2 PAPRGPLR 9
>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21
Query: 2 PPLPA 6
PPLPA
Sbjct: 31 PPLPA 35
>sp|VE6_HPV14|PROTEIN E6|Human papillomavirus 14
Query: 2 PPLPA 6
PPLPA
Sbjct: 34 PPLPA 38
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 PPLPAGP 8
PP+PAGP
Sbjct: 772 PPIPAGP 778
>sp|M1_I97A1|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I97A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I85A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I60A0|MATRIX protein 1|Influenza A virus (strain A/Ann
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I57A1|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I56A3|MATRIX protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I36A0|MATRIX protein 1|Influenza A virus (strain A/Henry/1936
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I34A1|MATRIX protein 1|Influenza A virus (strain A/Puerto
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I06A0|MATRIX protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I05A1|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I03A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I03A0|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I02A7|MATRIX protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 13 IPSGPLK 19
>sp|M1_I02A6|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I02A5|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I02A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I01A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I01A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I01A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I00A0|MATRIX protein 1|Influenza A virus (strain A/Duck/Hong
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I000X|MATRIX protein 1|Influenza A virus (strain A/X-31
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|M1_I000F|MATRIX protein 1|Influenza A virus (strain A/Chicken/Weybridge
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 IPSGPLK 21
>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19
Query: 2 PPLPA 6
PPLPA
Sbjct: 26 PPLPA 30
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 WPPLPAGPL 9
+PP GPL
Sbjct: 4713 FPPTSFGPL 4721
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 WPPLPAGPL 9
+PP GPL
Sbjct: 4690 FPPTSFGPL 4698
>sp|M1_I96A3|MATRIX protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I96A2|MATRIX protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I96A0|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I89A2|MATRIX protein 1|Influenza A virus (strain A/Beijing/353/1989
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I88A7|MATRIX protein 1|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I88A5|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I88A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/8/1988
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I85A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I83A8|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I83A1|MATRIX protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I82A9|MATRIX protein 1|Influenza A virus (strain A/Philippines/2/1982
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I82A7|MATRIX protein 1|Influenza A virus (strain A/Swine/Hong
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I81A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I80AA|MATRIX protein 1|Influenza A virus (strain A/India/6263/1980
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I80A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I80A2|MATRIX protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I79A0|MATRIX protein 1|Influenza A virus (strain A/Bangkok/1/1979
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I78A8|MATRIX protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I78A7|MATRIX protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I78A3|MATRIX protein 1|Influenza A virus (strain A/Mallard/New
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I77AC|MATRIX protein 1|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I77AB|MATRIX protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I77AA|MATRIX protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I77A9|MATRIX protein 1|Influenza A virus (strain A/Equine/New
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I77A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I76A6|MATRIX protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I75A0|MATRIX protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I73A5|MATRIX protein 1|Influenza A virus (strain A/Port
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I72A8|MATRIX protein 1|Influenza A virus (strain A/Udorn/1972
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I72A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I72A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I72A2|MATRIX protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I71A1|MATRIX protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I70A0|MATRIX protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I69A0|MATRIX protein 1|Influenza A virus (strain A/England/878/1969
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I68A6|MATRIX protein 1|Influenza A virus (strain A/Northern
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I68A5|MATRIX protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I68A4|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I68A0|MATRIX protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I67A2|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I67A0|MATRIX protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I61A1|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I59A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I57A5|MATRIX protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I57A3|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I57A2|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I57A0|MATRIX protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I54A2|MATRIX protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I54A1|MATRIX protein 1|Influenza A virus (strain A/Swine/May/1954
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I51A0|MATRIX protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I50A0|MATRIX protein 1|Influenza A virus (strain A/Fort
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I45A0|MATRIX protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I43A0|MATRIX protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I40A0|MATRIX protein 1|Influenza A virus (strain A/Hickox/1940
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I37A0|MATRIX protein 1|Influenza A virus (strain A/Swine/29/1937
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I35A3|MATRIX protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I33A0|MATRIX protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I30A0|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I18A0|MATRIX protein 1|Influenza A virus (strain A/Brevig
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I07A0|MATRIX protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 12 VPSGPLK 18
>sp|M1_I02A4|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I02A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I02A1|MATRIX protein 1|Influenza A virus (strain A/Guinea
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 8 VPSGPLK 14
>sp|M1_I02A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I01A0|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|M1_I00A1|MATRIX protein 1|Influenza A virus (strain A/New
Query: 4 LPAGPLR 10
+P+GPL+
Sbjct: 15 VPSGPLK 21
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PLPAGPLR 10
P+P GP R
Sbjct: 722 PIPRGPDR 729
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PLPAGPLR 10
P+P GP R
Sbjct: 722 PIPRGPDR 729
>sp|VE6_HPV25|PROTEIN E6|Human papillomavirus 25
Query: 2 PPLPA 6
PPLPA
Sbjct: 21 PPLPA 25
>sp|VE6_HPV20|PROTEIN E6|Human papillomavirus 20
Query: 2 PPLPA 6
PPLPA
Sbjct: 28 PPLPA 32
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PLPAGPLR 10
P+P GP R
Sbjct: 721 PVPRGPDR 728
>sp|MC014_MCV1|PROTEIN MC014|Molluscum contagiosum virus subtype 1
Query: 1 WPPLPAG 7
W P+PAG
Sbjct: 23 WEPVPAG 29
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PLPAGPLR 10
P P GP R
Sbjct: 722 PTPGGPDR 729
>sp|US20_HCMVT|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PPLPAGP 8
PP PA P
Sbjct: 27 PPSPAAP 33
>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PPLPAGPL 9
PPL GPL
Sbjct: 112 PPLFHGPL 119
>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPLPAGPL 9
PPL GPL
Sbjct: 112 PPLFHGPL 119
>sp|US20_HCMVA|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPLPAGP 8
PP PA P
Sbjct: 27 PPSPAAP 33
>sp|NS1_I05A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 PPLPAGPLR 10
PPLP+ R
Sbjct: 203 PPLPSNQKR 211
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 PPLPA 6
PPLPA
Sbjct: 364 PPLPA 368
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 PPLPA 6
PPLPA
Sbjct: 364 PPLPA 368
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 PPLPA 6
PPLPA
Sbjct: 365 PPLPA 369
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 4 LPAGPLR 10
LP GPLR
Sbjct: 102 LPEGPLR 108
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 257 PPIPVGEI 264
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 256 PPIPVGEI 263
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PPLPAGPL 9
PPLP P+
Sbjct: 11 PPLPVLPV 18
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPLPAGPL 9
PPLP P+
Sbjct: 11 PPLPVLPV 18
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 250 PPIPVGEI 257
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 3 PLPAGP 8
P+P GP
Sbjct: 627 PIPNGP 632
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 251 PPIPVGEI 258
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PLPAGP 8
P+P GP
Sbjct: 712 PVPRGP 717
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PLPAGPL 9
P P GPL
Sbjct: 219 PAPVGPL 225
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 256 PPIPVGDI 263
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 250 PPIPVGDI 257
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 260 PPIPVGDI 267
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 255 PPIPVGEI 262
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 2 PPLPAGPL 9
PP P PL
Sbjct: 648 PPSPPAPL 655
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPVPVGEI 261
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 250 PPVPVGEM 257
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 257 PPIPVGEI 264
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 PPLPAGPL 9
PP P PL
Sbjct: 649 PPSPPAPL 656
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 1 WPPLPAGP 8
+ PLP GP
Sbjct: 69 YRPLPEGP 76
>sp|US02_HHV11|PROTEIN US2|Human herpesvirus 1 (strain 17)
Query: 1 WPPLPAGP 8
W P PA P
Sbjct: 177 WTPFPAAP 184
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 256 PPIPVGDI 263
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 250 PPVPVGEI 257
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 253 PPIPVGEI 260
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 250 PPVPVGEI 257
>sp|US02_HHV2H|PROTEIN US2|Human herpesvirus 2 (strain HG52)
Query: 1 WPPLPAGP 8
W P PA P
Sbjct: 177 WTPFPAAP 184
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 260 PPIPVGDI 267
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 252 PPVPVGDI 259
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 251 PPIPVGEI 258
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPLPAGPL 9
PP+P G +
Sbjct: 254 PPIPVGEI 261