AT132_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|GVLPSSDASM

>sp|RS4_THEPD|SMALL ribosomal subunit protein uS4|Thermofilum pendens (strain DSM

Query: 1 GVLPSSDASM 10
G+LPS DAS+
Sbjct: 81 GLLPSEDASL 90


>sp|AMZA_ARCFU|ARCHAEMETZINCIN fulgidus (strain ATCC 49558

Query: 2 VLPSSDASM 10
VLP+SD S+
Sbjct: 32 VLPASDVSL 40


>sp|GATD_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus abyssi (strain GE5 /

Query: 4 PSSDASM 10
PSSDA+M
Sbjct: 211 PSSDAAM 217


>sp|GATD_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus horikoshii (strain ATCC

Query: 4 PSSDASM 10
PSSDA+M
Sbjct: 211 PSSDAAM 217


>sp|GATD_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Archaeoglobus fulgidus (strain ATCC

Query: 4 PSSDASM 10
PSSDA+M
Sbjct: 198 PSSDAAM 204


>sp|GATD_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PSSDASM 10
PSSDA+M
Sbjct: 211 PSSDAAM 217


>sp|KITH_HALWD|THYMIDINE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GVLPSSDASM 10
GV+PS+D S+
Sbjct: 106 GVIPSNDDSV 115


>sp|GATD_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermococcus kodakarensis (strain ATCC

Query: 4 PSSDASM 10
PSSDA+M
Sbjct: 213 PSSDAAM 219


>sp|APGM_SACI7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain

Query: 1 GVLPSSDAS 9
GV+P SD S
Sbjct: 54 GVIPGSDTS 62


>sp|APGM_SACI2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 GVLPSSDAS 9
GV+P SD S
Sbjct: 54 GVIPGSDTS 62


>sp|APGM_SACI1|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain

Query: 1 GVLPSSDAS 9
GV+P SD S
Sbjct: 54 GVIPGSDTS 62


>sp|APGM_SACI6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GVLPSSDAS 9
GV+P SD S
Sbjct: 54 GVIPGSDTS 62


>sp|APGM_SACI4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.14.25

Query: 1 GVLPSSDAS 9
GV+P SD S
Sbjct: 54 GVIPGSDTS 62


>sp|APGM_SACI3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.27)

Query: 1 GVLPSSDAS 9
GV+P SD S
Sbjct: 54 GVIPGSDTS 62


>sp|GATD_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanobrevibacter smithii (strain ATCC

Query: 4 PSSDASM 10
PSSDA+M
Sbjct: 209 PSSDANM 215


>sp|APGM_SACS2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus solfataricus (strain ATCC

Query: 1 GVLPSSDAS 9
G++P SD S
Sbjct: 54 GIIPGSDTS 62


>sp|MDH_SACS2|MALATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GVLPSSD 7
GVLP SD
Sbjct: 274 GVLPESD 280


>sp|GATD_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanothermobacter thermautotrophicus

Query: 4 PSSDASM 10
PSSDAS+
Sbjct: 209 PSSDASL 215


>sp|CETZ1_HALVD|TUBULIN-LIKE protein CetZ1|Haloferax volcanii (strain ATCC 29605

Query: 1 GVLPSSD 7
G+LP SD
Sbjct: 135 GILPGSD 141




2|SequenceR|15|6|GTPTSGVLPS

>sp|RRP4_METS3|EXOSOME complex component Rrp4|Methanobrevibacter smithii (strain ATCC

Query: 2 TPTSGVLPS 10
+P SG+LP+
Sbjct: 84 SPYSGILPA 92


>sp|COBQ_THEGJ|PROBABLE cobyric acid synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GTPTSGVLP 9
G PT GV+P
Sbjct: 218 GKPTLGVIP 226


>sp|COBQ_METTH|PROBABLE cobyric acid synthase|Methanothermobacter thermautotrophicus

Query: 1 GTPTSGVLP 9
G P GVLP
Sbjct: 219 GVPVLGVLP 227


>sp|COBQ_THEON|PROBABLE cobyric acid synthase|Thermococcus onnurineus (strain NA1)

Query: 1 GTPTSGVLP 9
G PT GV+P
Sbjct: 218 GKPTLGVVP 226


>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus fulgidus

Query: 2 TPTSGVLPS 10
TPTSGV S
Sbjct: 269 TPTSGVFWS 277


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 3 PTSGVLP 9
PTSG++P
Sbjct: 313 PTSGLIP 319


>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GTPTSGVLP 9
G P GVLP
Sbjct: 217 GIPVLGVLP 225


>sp|COBQ_METAC|PROBABLE cobyric acid synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GTPTSGVLP 9
G P GVLP
Sbjct: 217 GIPVLGVLP 225


>sp|COBQ_METMA|PROBABLE cobyric acid synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GTPTSGVLP 9
G P GVLP
Sbjct: 217 GIPVLGVLP 225


>sp|GCS2_HALLT|GLUTAMATE--CYSTEINE ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 GTPTSGV 7
G PTSG+
Sbjct: 28 GRPTSGI 34


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 1 GTPTSGVL 8
GTP SG++
Sbjct: 233 GTPRSGLI 240


>sp|GPDA_ARCFU|NADP(+)-DEPENDENT glycerol-3-phosphate dehydrogenase|Archaeoglobus fulgidus (strain

Query: 1 GTPTSGVLP 9
G T GVLP
Sbjct: 78 GVSTDGVLP 86


>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GTPTSGVLPS 10
G PTS +PS
Sbjct: 169 GIPTSAGIPS 178


>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 GTPTSGV 7
G PTSG+
Sbjct: 28 GRPTSGI 34




3|SequenceR|20|11|TLTGYGTPTS

>sp|Y1761_METMA|MEMO1 family protein MM_1761|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 TGYGTPTS 10
TGYG+P S
Sbjct: 76 TGYGSPVS 83


>sp|Y028_PYRCJ|MEMO1 family protein Pcal_0028|Pyrobaculum calidifontis (strain DSM

Query: 2 LTGYGTPTS 10
L GYG PT+
Sbjct: 70 LAGYGAPTT 78


>sp|Y1422_METBF|MEMO1 family protein Mbar_A1422|Methanosarcina barkeri (strain Fusaro /

Query: 3 TGYGTPTS 10
TGYG+P S
Sbjct: 74 TGYGSPVS 81


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 3 TGYGTPTS 10
T YG+PTS
Sbjct: 224 TKYGSPTS 231


>sp|Y601_METAC|MEMO1 family protein MA_0601|Methanosarcina acetivorans (strain ATCC

Query: 3 TGYGTPTS 10
TGYG+P S
Sbjct: 76 TGYGSPVS 83


>sp|TRM10_THEKO|TRNA (guanine(9)-/adenine(9)-N1)-methyltransferase|Thermococcus

Query: 2 LTGYGTPTS 10
+T YG PTS
Sbjct: 159 ITTYGGPTS 167


>sp|NRPA_METMA|NIF-REGULATING protein A|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 TGYGTP 8
TGYG+P
Sbjct: 59 TGYGSP 64


>sp|Y031_METPE|PUTATIVE HTH-type transcriptional regulatory protein|Methanosphaerula

Query: 2 LTGYGT 7
LTGYGT
Sbjct: 238 LTGYGT 243


>sp|ILVC_CENSY|KETOL-ACID reductoisomerase (NADP(+))|Cenarchaeum symbiosum (strain A)

Query: 2 LTGYGTPT 9
L G+GTP+
Sbjct: 142 LEGFGTPS 149


>sp|Y732_METJA|UNCHARACTERIZED protein MJ0732|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GYGTP 8
GYGTP
Sbjct: 27 GYGTP 31


>sp|Y1488_METJA|UNCHARACTERIZED protein MJ1488|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TLTGYGTPTS 10
+LT Y TP S
Sbjct: 151 SLTAYETPMS 160


>sp|Y2394_METBU|MEMO1 family protein Mbur_2394|Methanococcoides burtonii (strain DSM

Query: 3 TGYGTPTS 10
TGYG+P +
Sbjct: 74 TGYGSPVA 81


>sp|ENDA_HALVD|TRNA-SPLICING endonuclease|Haloferax volcanii (strain ATCC 29605

Query: 4 GYGTPT 9
GYG PT
Sbjct: 25 GYGRPT 30


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 GYGTP 8
GYGTP
Sbjct: 308 GYGTP 312


>sp|AMPPA_THEGJ|AMP phosphorylase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 TLTGYGTPTS 10
TLT GTP S
Sbjct: 78 TLTPVGTPES 87


>sp|GSA_METS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 TGYGTPT 9
+ YGTPT
Sbjct: 79 SAYGTPT 85


>sp|Y2310_ARCFU|MEMO1 family protein AF_2310|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TGYGTPTS 10
TGYG P +
Sbjct: 72 TGYGLPVA 79


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 5 YGTPT 9
YGTPT
Sbjct: 88 YGTPT 92


>sp|ECFA2_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 1 TLTGYGTPTS 10
T+T YG P S
Sbjct: 61 TVTIYGKPVS 70


>sp|GSA_METTP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 YGTPTS 10
YGTPT+
Sbjct: 94 YGTPTA 99




4|SequenceR|25|16|ISTGITLTGY

>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ISTGITLTGY 10
+ +GIT +GY
Sbjct: 24 VESGITPSGY 33


>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ISTGITLTGY 10
+ +GIT +GY
Sbjct: 24 VESGITPSGY 33


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ISTGITLTGY 10
+ +GIT +GY
Sbjct: 24 VESGITPSGY 33


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 ISTGITLTGY 10
+ +GIT +GY
Sbjct: 24 VESGITPSGY 33


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 ISTGITLTG 9
+STGIT G
Sbjct: 451 VSTGITYLG 459


>sp|AATC_METJA|A-TYPE ATP synthase subunit C|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ISTGITLTGY 10
+S +TLTGY
Sbjct: 279 LSKYVTLTGY 288


>sp|RS10_NATPD|SMALL ribosomal subunit protein uS10|Natronomonas pharaonis (strain

Query: 3 TGITLTG 9
TG+TL+G
Sbjct: 30 TGVTLSG 36




5|SequenceR|30|21|SSLPDISTGI

>sp|Y672_METJA|UNCHARACTERIZED transporter MJ0672|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SSLPDISTGI 10
SSLPDI GI
Sbjct: 21 SSLPDIYKGI 30


>sp|Y2383_SULTO|UNCHARACTERIZED protein STK_23830|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SLPDISTGI 10
+LP ISTGI
Sbjct: 112 ALPAISTGI 120


>sp|Y1111_PYRAE|UNCHARACTERIZED protein PAE1111|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 SLPDISTGI 10
+LP ISTGI
Sbjct: 119 ALPAISTGI 127


>sp|Y1252_SULAC|UNCHARACTERIZED protein Saci_1252|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SLPDISTGI 10
+LP ISTGI
Sbjct: 122 ALPAISTGI 130


>sp|NREA_HALVD|DNA repair protein NreA|Haloferax volcanii (strain ATCC 29605

Query: 1 SSLPDISTGI 10
S+ P++STGI
Sbjct: 61 SNYPNVSTGI 70


>sp|SYP_METAC|PROLINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LPDISTGI 10
LP+I TG+
Sbjct: 378 LPEIETGV 385


>sp|HIS7_PYRAR|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SSLPDISTG 9
+ LPD+S G
Sbjct: 114 AKLPDVSIG 122


>sp|IF2P_METS3|PROBABLE translation initiation factor IF-2|Methanobrevibacter smithii

Query: 2 SLPDISTG 9
+LPDIS G
Sbjct: 518 TLPDISRG 525


>sp|CHED1_METMA|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina mazei (strain

Query: 3 LPDISTGI 10
L D+STGI
Sbjct: 98 LSDVSTGI 105


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PDISTGI 10
PD STGI
Sbjct: 671 PDASTGI 677


>sp|UPP_HALSA|URACIL phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 SLPDISTG 9
LPDIS G
Sbjct: 131 KLPDISEG 138


>sp|UPP_HALS3|URACIL phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 SLPDISTG 9
LPDIS G
Sbjct: 131 KLPDISEG 138




6|SequenceR|35|26|VSSVSSSLPD

>sp|Y2340_ARCFU|UNCHARACTERIZED protein AF_2340|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VSSVSSSLPD 10
+SS+ S LPD
Sbjct: 414 ISSIESELPD 423


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 1 VSSVSSSLPD 10
+++VSS LPD
Sbjct: 149 LAAVSSVLPD 158


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VSSVSSSLPD 10
+SSV+ +LPD
Sbjct: 1 MSSVTVTLPD 10


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VSSVSSSLPD 10
+SSV+ +LPD
Sbjct: 1 MSSVTVTLPD 10


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 VSSSLPD 10
+SSSLPD
Sbjct: 187 LSSSLPD 193




7|SequenceR|40|31|YGSLRVSSVS

>sp|THPR_METTH|RNA 2',3'-cyclic phosphodiesterase|Methanothermobacter

Query: 2 GSLRVSSVS 10
GS+RVS VS
Sbjct: 155 GSMRVSEVS 163


>sp|RL40_METAC|LARGE ribosomal subunit protein eL40|Methanosarcina acetivorans (strain

Query: 1 YGSLRVSS 8
YG+LRV S
Sbjct: 36 YGTLRVKS 43


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 YGSLRVSSVS 10
YG RV S+S
Sbjct: 546 YGFARVDSIS 555




8|SequenceR|45|36|WPSGCYGSLR

>sp|Y289_METJA|UNCHARACTERIZED protein MJ0289|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PSGCYG 7
PSGCYG
Sbjct: 323 PSGCYG 328


>sp|HDRB2_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B2|Methanococcus

Query: 3 SGCYGSL 9
+GCYGSL
Sbjct: 79 NGCYGSL 85


>sp|HDRB2_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 3 SGCYGSL 9
+GCYGSL
Sbjct: 79 NGCYGSL 85


>sp|HDRB1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B1|Methanococcus

Query: 3 SGCYGSL 9
+GCYGSL
Sbjct: 84 NGCYGSL 90


>sp|HDRB1_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 3 SGCYGSL 9
+GCYGSL
Sbjct: 79 NGCYGSL 85


>sp|HDRB2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 3 SGCYGSL 9
+GCYGSL
Sbjct: 80 NGCYGSL 86


>sp|HDRB_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina mazei (strain

Query: 3 SGCYGSL 9
+GCYGSL
Sbjct: 80 NGCYGSL 86


>sp|RL4_PYRAE|LARGE ribosomal subunit protein uL4|Pyrobaculum aerophilum (strain ATCC

Query: 1 WPSGCYG 7
WP GC+
Sbjct: 104 WPRGCFA 110


>sp|Y1178_METJA|UNCHARACTERIZED glycosyltransferase MJ1178|Methanocaldococcus jannaschii (strain

Query: 1 WPSGCYGSL 9
+P GC G+L
Sbjct: 93 FPQGCVGAL 101


>sp|SDO1_ARCFU|RIBOSOME maturation protein SDO1 homolog|Archaeoglobus fulgidus (strain ATCC

Query: 2 PSGCYGSL 9
PSG YG L
Sbjct: 206 PSGMYGDL 213


>sp|HDRB_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 3 SGCYGSL 9
+GC+GSL
Sbjct: 79 NGCFGSL 85


>sp|HDRB_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 3 SGCYGSL 9
+GC+GSL
Sbjct: 79 NGCFGSL 85


>sp|HDRB_METKA|COB--COM heterodisulfide reductase subunit B|Methanopyrus kandleri (strain

Query: 3 SGCYGSL 9
+GC+GSL
Sbjct: 81 NGCFGSL 87


>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 1 WPSGCYGSL 9
+P G YG+L
Sbjct: 167 YPDGSYGNL 175


>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 2 PSGCYGSLR 10
P G Y SLR
Sbjct: 283 PVGLYASLR 291


>sp|SPSS_METBF|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WPSGCYGSL 9
+P G YG+L
Sbjct: 168 YPDGSYGNL 176


>sp|TRUD_ARCFU|PROBABLE tRNA pseudouridine synthase D|Archaeoglobus fulgidus (strain ATCC

Query: 2 PSGCYGSL 9
P GCY ++
Sbjct: 393 PRGCYATV 400


>sp|PYRG_CALMQ|CTP synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 GCYGSLR 10
G YGSLR
Sbjct: 446 GIYGSLR 452


>sp|ASD_METJA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanocaldococcus

Query: 1 WPSGCY 6
+P+GCY
Sbjct: 73 FPNGCY 78


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 1 WPSGCYGSLR 10
W S C+G+ R
Sbjct: 906 WGSTCHGAGR 915


>sp|SPSS2_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanococcoides burtonii (strain DSM 6242

Query: 1 WPSGCYGSL 9
+P G YG+L
Sbjct: 168 YPDGNYGNL 176


>sp|SPSS1_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WPSGCYGSL 9
+P G YG+L
Sbjct: 155 YPDGNYGNL 163


>sp|SPSS_METTP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 WPSGCYGSL 9
+P G YG+L
Sbjct: 167 YPDGNYGNL 175


>sp|Y1637_METJA|UNCHARACTERIZED protein MJ1637|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 CYGSL 9
CYGSL
Sbjct: 377 CYGSL 381


>sp|THSA_THEK8|CHAPERONIN subunit alpha|Thermococcus sp. (strain KS-8)

Query: 2 PSGCYGSL 9
P+GC G +
Sbjct: 538 PNGCMGGM 545


>sp|HDLB_ARCPA|HETERODISULFIDE reductase subunit B-like protein|Archaeoglobus profundus (strain

Query: 3 SGCYGSL 9
+ CYGSL
Sbjct: 80 NSCYGSL 86


>sp|KORB_METTH|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter thermautotrophicus

Query: 1 WPSGCYGS 8
+P G YGS
Sbjct: 140 FPEGSYGS 147


>sp|CYAS_METHJ|CYSTEATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PSGCYGSLR 10
P GC G +R
Sbjct: 24 PGGCQGLIR 32


>sp|SPSS_METMA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WPSGCYGSL 9
+P G YG++
Sbjct: 168 YPDGSYGNI 176


>sp|SPSS_METAC|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WPSGCYGSL 9
+P G YG++
Sbjct: 168 YPDGSYGNI 176




9|SequenceR|50|41|YGIVRWPSGC

>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IVRWPSG 9
IVRWP G
Sbjct: 425 IVRWPDG 431


>sp|RL22_METTP|LARGE ribosomal subunit protein uL22|Methanothrix thermoacetophila

Query: 1 YGIVRWPSG 9
+G+V WP+G
Sbjct: 71 HGLVGWPAG 79


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IVRWPSG 9
IV+WP G
Sbjct: 427 IVKWPDG 433


>sp|FAU1_PYRHO|PROBABLE ribonuclease FAU-1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IVRWPSG 9
IV+WP G
Sbjct: 425 IVKWPDG 431


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 3 IVRWPSG 9
IV+WP G
Sbjct: 425 IVKWPDG 431


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 3 IVRWPSG 9
IV+WP G
Sbjct: 427 IVKWPDG 433


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YGIVRWPSG 9
YGI RW G
Sbjct: 476 YGITRWVVG 484


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 1 YGIVRWPSG 9
YG V W SG
Sbjct: 56 YGFVPWASG 64


>sp|RL22_METMJ|LARGE ribosomal subunit protein uL22|Methanoculleus marisnigri (strain

Query: 2 GIVRWPSG 9
G+ +WP+G
Sbjct: 73 GLSKWPAG 80


>sp|YPZ2_METTF|UNCHARACTERIZED protein ORF2'|Methanothermobacter thermautotrophicus

Query: 5 RWPSG 9
RWPSG
Sbjct: 130 RWPSG 134


>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 5 RWPSG 9
RWPSG
Sbjct: 130 RWPSG 134


>sp|SYDND_METHJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 YGIVRWPS 8
Y IV WPS
Sbjct: 318 YFIVDWPS 325


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 1 YGIVRWPS 8
YGIV W S
Sbjct: 554 YGIVWWTS 561


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 2 GIVRWP 7
GIV WP
Sbjct: 30 GIVSWP 35


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 4 VRWPSG 9
V WPSG
Sbjct: 8229 VSWPSG 8234


>sp|DNAG_METLZ|DNA primase DnaG|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GIVRWPSG 9
GIVR P+G
Sbjct: 421 GIVRRPAG 428


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 YGIVRWPSG 9
YG+ RW G
Sbjct: 473 YGLTRWVIG 481


>sp|RL4_PYRAE|LARGE ribosomal subunit protein uL4|Pyrobaculum aerophilum (strain ATCC

Query: 6 WPSGC 10
WP GC
Sbjct: 104 WPRGC 108


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 YGIVRWPSG 9
YG+ RW G
Sbjct: 473 YGLTRWVIG 481


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 YGIVRWPSG 9
YG+ RW G
Sbjct: 473 YGLTRWVIG 481


>sp|MCH_HALMA|MESACONYL-COA hydratase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YGIVRWPS 8
YGIV W +
Sbjct: 146 YGIVTWET 153


>sp|MCH_HALHT|MESACONYL-COA hydratase|Haloarcula hispanica (strain ATCC 33960

Query: 1 YGIVRWPS 8
YGIV W +
Sbjct: 146 YGIVTWET 153


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 1 YGIVRW 6
YG+ RW
Sbjct: 495 YGVTRW 500


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YGIVRWP 7
YG++R+P
Sbjct: 321 YGMIRFP 327


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 RWPSG 9
+WPSG
Sbjct: 594 KWPSG 598


>sp|SYD_THEVO|ASPARTATE--TRNA(ASP) ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YGIVRWPS 8
Y I WPS
Sbjct: 316 YFITEWPS 323


>sp|SYD_THEAC|ASPARTATE--TRNA(ASP) ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YGIVRWPS 8
Y I WPS
Sbjct: 316 YFITEWPS 323


>sp|PURP_METKA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanopyrus kandleri (strain AV19 /

Query: 2 GIVRWPSG 9
G+VR P+G
Sbjct: 235 GLVRMPAG 242


>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IVRWPSG 9
IVRW +G
Sbjct: 479 IVRWKNG 485


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 YGIVRW 6
YG+ RW
Sbjct: 254 YGVERW 259


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 YGIVRW 6
YG+ RW
Sbjct: 254 YGVERW 259


>sp|MOBA_PYRFU|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus furiosus (strain

Query: 3 IVRWPSG 9
+ RWP+G
Sbjct: 118 VPRWPNG 124


>sp|SYS2_METMP|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YGIVRWPSG 9
YG+ RW G
Sbjct: 473 YGLSRWLIG 481


>sp|XACC_HALVD|PENTONOLACTONASE XacC|Haloferax volcanii (strain ATCC 29605

Query: 5 RWPSGC 10
RW GC
Sbjct: 205 RWEGGC 210




10|SequenceR|55|46|WVVVHYGIVR

>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 1 WVVVHYGIV 9
W HYGI+
Sbjct: 220 WAYQHYGII 228


>sp|LIVG_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 5 HYGIVR 10
HYGIVR
Sbjct: 81 HYGIVR 86


>sp|ADHS_META3|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VVVHYGIVR 10
V+VH GIVR
Sbjct: 62 VLVHKGIVR 70


>sp|RL3_PYRFU|LARGE ribosomal subunit protein uL3|Pyrococcus furiosus (strain ATCC

Query: 5 HYGIVR 10
HYGIVR
Sbjct: 313 HYGIVR 318


>sp|RL3_PYRHO|LARGE ribosomal subunit protein uL3|Pyrococcus horikoshii (strain ATCC

Query: 5 HYGIVR 10
HYGIVR
Sbjct: 310 HYGIVR 315


>sp|RL3_PYRAB|LARGE ribosomal subunit protein uL3|Pyrococcus abyssi (strain GE5 /

Query: 5 HYGIVR 10
HYGIVR
Sbjct: 309 HYGIVR 314


>sp|RL3_METJA|LARGE ribosomal subunit protein uL3|Methanocaldococcus jannaschii (strain

Query: 4 VHYGIVR 10
+HYG++R
Sbjct: 282 LHYGVIR 288


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 VHYGIVR 10
VHYGI++
Sbjct: 315 VHYGILK 321


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 4 VHYGIVR 10
VHYGI++
Sbjct: 315 VHYGILK 321


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 4 VHYGIVR 10
VHYGI++
Sbjct: 315 VHYGILK 321


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 WVVVHYG 7
WV VH+G
Sbjct: 482 WVSVHHG 488


>sp|RL3_METLZ|LARGE ribosomal subunit protein uL3|Methanocorpusculum labreanum (strain

Query: 4 VHYGIVR 10
+HYG+VR
Sbjct: 281 LHYGLVR 287


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WVVVHYG 7
WV VH+G
Sbjct: 482 WVSVHHG 488


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 WVVVHY 6
WV++HY
Sbjct: 158 WVLLHY 163


>sp|RL3_THEON|LARGE ribosomal subunit protein uL3|Thermococcus onnurineus (strain NA1)

Query: 5 HYGIVR 10
HYGI+R
Sbjct: 295 HYGIIR 300


>sp|RL3_CALMQ|LARGE ribosomal subunit protein uL3|Caldivirga maquilingensis (strain

Query: 5 HYGIVR 10
HYGIVR
Sbjct: 290 HYGIVR 295


>sp|GLMS_PYRFU|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus furiosus (strain ATCC

Query: 2 VVVHYGIV 9
VVVH GIV
Sbjct: 96 VVVHNGIV 103


>sp|RL3_THEKO|LARGE ribosomal subunit protein uL3|Thermococcus kodakarensis (strain

Query: 5 HYGIVR 10
HYGIVR
Sbjct: 294 HYGIVR 299


>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 VHYGIVR 10
+HYGI++
Sbjct: 315 IHYGILK 321


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 4 VHYGIVR 10
+HYGI++
Sbjct: 315 IHYGILK 321


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 VHYGIVR 10
+HYGI++
Sbjct: 321 IHYGILK 327


>sp|Y612_METJA|PROBABLE arogenate/prephenate dehydrogenase|Methanocaldococcus jannaschii

Query: 3 VVHYGIVR 10
VVH+G+++
Sbjct: 319 VVHFGVLK 326


>sp|RL3_SULTO|LARGE ribosomal subunit protein uL3|Sulfurisphaera tokodaii (strain DSM

Query: 4 VHYGIVR 10
V+YGIVR
Sbjct: 291 VNYGIVR 297


>sp|RL3_SACS2|LARGE ribosomal subunit protein uL3|Saccharolobus solfataricus (strain

Query: 4 VHYGIVR 10
V YGIVR
Sbjct: 299 VRYGIVR 305


>sp|RL3_SACI7|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 4 VHYGIVR 10
V YGIVR
Sbjct: 299 VRYGIVR 305


>sp|RL3_SACI6|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 4 VHYGIVR 10
V YGIVR
Sbjct: 299 VRYGIVR 305


>sp|RL3_SACI4|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 4 VHYGIVR 10
V YGIVR
Sbjct: 299 VRYGIVR 305


>sp|RL3_SACI3|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 4 VHYGIVR 10
V YGIVR
Sbjct: 299 VRYGIVR 305


>sp|RL3_SACI2|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 4 VHYGIVR 10
V YGIVR
Sbjct: 299 VRYGIVR 305


>sp|RL3_SACI1|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 4 VHYGIVR 10
V YGIVR
Sbjct: 299 VRYGIVR 305


>sp|GLMS_PYRHO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus horikoshii (strain ATCC

Query: 2 VVVHYGIV 9
VVVH GI+
Sbjct: 96 VVVHNGII 103


>sp|GLMS_PYRAB|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus abyssi (strain GE5 /

Query: 2 VVVHYGIV 9
VVVH GI+
Sbjct: 96 VVVHNGII 103


>sp|RL3_METAR|LARGE ribosomal subunit protein uL3|Methanocella arvoryzae (strain DSM

Query: 4 VHYGIVR 10
+HYG++R
Sbjct: 285 LHYGLIR 291


>sp|TREH_THEAC|TREHALASE acidophilum (strain ATCC 25905

Query: 1 WVVVHYGI 8
WV+ YGI
Sbjct: 163 WVIALYGI 170


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VHYGIVR 10
+HYGI++
Sbjct: 313 IHYGILK 319


>sp|ORNAT_THEKO|ORNITHINE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WVVVHYGI 8
W + H+G+
Sbjct: 276 WAIEHFGV 283


>sp|RL3_THEGJ|LARGE ribosomal subunit protein uL3|Thermococcus gammatolerans (strain

Query: 5 HYGIVR 10
HYGI+R
Sbjct: 294 HYGIIR 299


>sp|GCH1L_PYRAB|GTP cyclohydrolase 1 type 2|Pyrococcus abyssi (strain GE5 /

Query: 2 VVVHYGIV 9
++VH+GI+
Sbjct: 60 LIVHHGII 67


>sp|RL5_NATPD|LARGE ribosomal subunit protein uL5|Natronomonas pharaonis (strain ATCC

Query: 2 VVVHYGIVR 10
VVVH G+ R
Sbjct: 21 VVVHMGVGR 29


>sp|RL3_METMJ|LARGE ribosomal subunit protein uL3|Methanoculleus marisnigri (strain

Query: 4 VHYGIVR 10
+HYG+VR
Sbjct: 285 LHYGLVR 291


>sp|GCH1L_PYRHO|GTP cyclohydrolase 1 type 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VVVHYGIV 9
++VH+GI+
Sbjct: 60 LIVHHGII 67


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 1 WVVVHYG 7
WV+ H G
Sbjct: 659 WVITHKG 665


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 1 WVVVHYGI 8
W++ YGI
Sbjct: 205 WIIALYGI 212


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 3 VVHYGIVR 10
VVH G++R
Sbjct: 100 VVHNGVIR 107


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 5 HYGIVR 10
HYGI++
Sbjct: 321 HYGIIK 326


>sp|RL3_PYRNV|LARGE ribosomal subunit protein uL3|Pyrobaculum neutrophilum (strain DSM

Query: 4 VHYGIVR 10
+HYG++R
Sbjct: 286 LHYGVIR 292


>sp|RL3_ARCFU|LARGE ribosomal subunit protein uL3|Archaeoglobus fulgidus (strain ATCC

Query: 4 VHYGIVR 10
+HYG++R
Sbjct: 278 LHYGVIR 284


>sp|ADHS_METJA|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VVVHYGIVR 10
V++H GIVR
Sbjct: 62 VLLHKGIVR 70


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WVVVHYGI 8
W++ HY +
Sbjct: 285 WILSHYNL 292


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 VHYGIVR 10
VHYGI++
Sbjct: 322 VHYGILK 328


>sp|RL3_THESM|LARGE ribosomal subunit protein uL3|Thermococcus sibiricus (strain DSM

Query: 5 HYGIVR 10
HYG+V+
Sbjct: 307 HYGVVK 312


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WVVVHYG 7
W VVH G
Sbjct: 209 WTVVHNG 215


>sp|GCH1L_ARCFU|GTP cyclohydrolase 1 type 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VVVHYGIV 9
+VVH+G++
Sbjct: 60 LVVHHGLI 67




11|SequenceR|60|51|IGAMMWVVVH

>sp|TYW3_THESM|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 2 GAMMWVVVH 10
G M+W +VH
Sbjct: 93 GGMLWFMVH 101


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 2 GAMMWVVVH 10
G W+VVH
Sbjct: 845 GEERWLVVH 853




12|SequenceR|65|56|FLLLPIGAMM

>sp|ENO_PYRHO|ENOLASE horikoshii (strain ATCC 700860

Query: 1 FLLLPIGA 8
F+++PIGA
Sbjct: 166 FMIMPIGA 173


>sp|ENO_PYRFU|ENOLASE furiosus (strain ATCC 43587

Query: 1 FLLLPIGA 8
F+++PIGA
Sbjct: 166 FMIMPIGA 173


>sp|ENO_PYRAB|ENOLASE abyssi (strain GE5 /

Query: 1 FLLLPIGA 8
F+++PIGA
Sbjct: 166 FMIMPIGA 173


>sp|ENO_METVS|ENOLASE vannielii (strain ATCC 35089

Query: 1 FLLLPIGA 8
F+++PIGA
Sbjct: 167 FMIMPIGA 174


>sp|ENO_METST|ENOLASE stadtmanae (strain ATCC 43021

Query: 1 FLLLPIGA 8
FL++P+GA
Sbjct: 158 FLVIPVGA 165


>sp|ENO_ARCFU|ENOLASE fulgidus (strain ATCC 49558

Query: 1 FLLLPIGA 8
FL++P+GA
Sbjct: 151 FLVIPVGA 158


>sp|AMZA_AERPE|ARCHAEMETZINCIN pernix (strain ATCC 700893

Query: 1 FLLLPIG 7
FLLLP+G
Sbjct: 7 FLLLPVG 13


>sp|ENO_THEON|ENOLASE onnurineus (strain NA1)

Query: 1 FLLLPIGA 8
F+++P+GA
Sbjct: 166 FMIMPVGA 173


>sp|ENO_THEKO|ENOLASE kodakarensis (strain ATCC BAA-918

Query: 1 FLLLPIGA 8
F+++P+GA
Sbjct: 166 FMIMPVGA 173


>sp|ENO_THEGJ|ENOLASE gammatolerans (strain DSM 15229

Query: 1 FLLLPIGA 8
F+++P+GA
Sbjct: 166 FMIMPVGA 173


>sp|ENO_METMP|ENOLASE maripaludis (strain DSM 14266

Query: 1 FLLLPIGA 8
F+++P+GA
Sbjct: 167 FMIMPVGA 174


>sp|ENO_METM7|ENOLASE maripaludis (strain C7 /

Query: 1 FLLLPIGA 8
F+++P+GA
Sbjct: 167 FMIMPVGA 174


>sp|ENO_METM5|ENOLASE maripaludis (strain C5 /

Query: 1 FLLLPIGA 8
F+++P+GA
Sbjct: 167 FMIMPVGA 174


>sp|ENO_METJA|ENOLASE jannaschii (strain ATCC 43067

Query: 1 FLLLPIGA 8
F+++P+GA
Sbjct: 167 FMIMPVGA 174


>sp|ENO_META3|ENOLASE aeolicus (strain ATCC BAA-1280

Query: 1 FLLLPIGA 8
F+++P+GA
Sbjct: 166 FMIMPVGA 173


>sp|ENO_METTH|ENOLASE thermautotrophicus (strain ATCC 29096

Query: 1 FLLLPIGA 8
FL++P+GA
Sbjct: 158 FLVVPVGA 165


>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 1 FLLLPIGA 8
FL+ PIGA
Sbjct: 152 FLVTPIGA 159


>sp|PFDA_METAR|PREFOLDIN subunit alpha|Methanocella arvoryzae (strain DSM 22066

Query: 2 LLLPIGA 8
LL+PIGA
Sbjct: 60 LLVPIGA 66


>sp|Y609_METJA|UNCHARACTERIZED protein MJ0609|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLLLPIGAM 9
FLL+ IGA+
Sbjct: 273 FLLISIGAL 281




13|SequenceR|70|61|LPKWRFLLLP

>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 4 WRFLLLP 10
WR LLLP
Sbjct: 328 WRVLLLP 334


>sp|RNP2_NATPD|RIBONUCLEASE P protein component 2|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PKWRFL 7
P+WR+L
Sbjct: 10 PRWRYL 15


>sp|RNP2_HALSA|RIBONUCLEASE P protein component 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 PKWRFL 7
P+WR+L
Sbjct: 10 PRWRYL 15


>sp|RNP2_HALS3|RIBONUCLEASE P protein component 2|Halobacterium salinarum (strain ATCC 29341

Query: 2 PKWRFL 7
P+WR+L
Sbjct: 10 PRWRYL 15


>sp|RNP2_HALMA|RIBONUCLEASE P protein component 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 PKWRFL 7
P+WR+L
Sbjct: 10 PRWRYL 15


>sp|G3P_PYRNV|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LPKWR 5
LPKWR
Sbjct: 321 LPKWR 325


>sp|G3P_PYRIL|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LPKWR 5
LPKWR
Sbjct: 321 LPKWR 325


>sp|PHNC1_NATPD|PHOSPHONATES import ATP-binding protein PhnC|Natronomonas pharaonis (strain ATCC

Query: 1 LPKWRFLL 8
LP WR LL
Sbjct: 97 LPSWRELL 104


>sp|Y1433_ARCFU|UPF0215 protein AF_1433|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPKWRFL 7
+ KWRFL
Sbjct: 1 MKKWRFL 7


>sp|PYRF_HALMA|OROTIDINE 5'-phosphate decarboxylase|Haloarcula marismortui (strain ATCC

Query: 1 LPKWRF 6
LP+W+F
Sbjct: 38 LPRWQF 43


>sp|Y3535_METJA|UNCHARACTERIZED protein MJECL35|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPKWRFLLLP 10
LPK+ ++++P
Sbjct: 440 LPKFSYIIIP 449


>sp|RL15E_METST|LARGE ribosomal subunit protein eL15|Methanosphaera stadtmanae (strain

Query: 1 LPKWR 5
LPKWR
Sbjct: 30 LPKWR 34


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LPKWRFL 7
+P WRF+
Sbjct: 238 MPLWRFM 244


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LPKWRFL 7
+P WRF+
Sbjct: 238 MPLWRFM 244


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LPKWRFL 7
+P WRF+
Sbjct: 238 MPLWRFM 244


>sp|DAPAL_PYRIL|UNCHARACTERIZED DapA-like lyase Pisl_0309|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LPKWRFL 7
+P WRF+
Sbjct: 238 MPLWRFM 244


>sp|RL15E_METKA|LARGE ribosomal subunit protein eL15|Methanopyrus kandleri (strain AV19

Query: 1 LPKWR 5
LPKWR
Sbjct: 30 LPKWR 34


>sp|Y896_ARCFU|UNCHARACTERIZED protein AF_0896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PKWRFLLL 9
P+W+FL L
Sbjct: 292 PEWQFLPL 299


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 4 WRFLLL 9
WRFLL+
Sbjct: 356 WRFLLI 361




14|SequenceR|75|66|LRVGWLPKWR

>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RVGWLPK 8
++GW+PK
Sbjct: 127 QIGWIPK 133


>sp|AGL12_HALVD|LOW-SALT glycan biosynthesis protein Agl12|Haloferax volcanii (strain ATCC

Query: 3 VGWLPKW 9
+GW P+W
Sbjct: 286 LGWEPEW 292


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 2 RVGWLPK 8
RV WLPK
Sbjct: 347 RVVWLPK 353


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 2 RVGWLPK 8
RV WLPK
Sbjct: 640 RVVWLPK 646


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RVGWLPKW 9
RV W+P W
Sbjct: 428 RVRWIPDW 435


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 RVGWLPKW 9
RV W+P W
Sbjct: 421 RVQWIPSW 428


>sp|Y2041_ARCFU|UNCHARACTERIZED protein AF_2041|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RVGWLPKW 9
+ G++PKW
Sbjct: 99 KSGYMPKW 106


>sp|ARADH_HALVD|L-ARABINOSE 1-dehydrogenase (NAD(P)(+))|Haloferax volcanii (strain ATCC 29605

Query: 1 LRVGWL 6
LR+GWL
Sbjct: 167 LRIGWL 172


>sp|Y663_PYRAB|PROBABLE S-adenosyl-L-methionine-binding protein PYRAB06630|Pyrococcus

Query: 1 LRVGWLPK 8
+R+GWL K
Sbjct: 141 VRIGWLEK 148


>sp|ENGB_METMP|PROBABLE GTP-binding protein EngB|Methanococcus maripaludis (strain DSM

Query: 3 VGWLPKWR 10
+G+LP WR
Sbjct: 187 LGFLPPWR 194


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RVGWLPKW 9
RV W+P W
Sbjct: 421 RVQWVPSW 428


>sp|GYAR_PYRFU|GLYOXYLATE reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VGWLPKW 9
+ W PKW
Sbjct: 136 IAWHPKW 142


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 RVGWLPKW 9
RV W P W
Sbjct: 479 RVNWYPDW 486


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RVGWLPKW 9
+V W+P W
Sbjct: 368 KVNWIPDW 375


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 RVGWLPKW 9
RV W+P+W
Sbjct: 445 RVEWIPEW 452


>sp|FAU1_NATPD|PROBABLE ribonuclease FAU-1|Natronomonas pharaonis (strain ATCC 35678

Query: 4 GWLPKW 9
GW P W
Sbjct: 191 GWTPNW 196


>sp|ACDB_METKA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanopyrus kandleri

Query: 2 RVGWLPK 8
RV W+PK
Sbjct: 353 RVVWMPK 359


>sp|AMZA_THEKO|ARCHAEMETZINCIN kodakarensis (strain ATCC BAA-918

Query: 3 VGWLPKW 9
+G++P+W
Sbjct: 9 IGYIPEW 15


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 RVGWLPKW 9
+V W P+W
Sbjct: 429 KVNWTPEW 436


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 RVGWLPKWR 10
RV W +W+
Sbjct: 216 RVEWAARWK 224


>sp|GAD_SACS2|D-GLUCONATE/D-GALACTONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 WLPKWR 10
W P+W+
Sbjct: 329 WFPQWK 334


>sp|PURA_THEVO|ADENYLOSUCCINATE synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 RVGWL 6
RVGWL
Sbjct: 312 RVGWL 316


>sp|PURA_THEAC|ADENYLOSUCCINATE synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RVGWL 6
RVGWL
Sbjct: 311 RVGWL 315


>sp|PURA_NATPD|ADENYLOSUCCINATE synthetase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 RVGWL 6
RVGWL
Sbjct: 331 RVGWL 335


>sp|PURA_HALSA|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 2 RVGWL 6
RVGWL
Sbjct: 314 RVGWL 318


>sp|PURA_HALS3|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 2 RVGWL 6
RVGWL
Sbjct: 314 RVGWL 318


>sp|PURA_HALMA|ADENYLOSUCCINATE synthetase|Haloarcula marismortui (strain ATCC 43049

Query: 2 RVGWL 6
RVGWL
Sbjct: 333 RVGWL 337


>sp|AGLB2_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LRVGWLP 7
LR+ WLP
Sbjct: 73 LRIDWLP 79


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 VGWLPKW 9
V W+P W
Sbjct: 438 VDWVPDW 444


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 VGWLPKW 9
V W+P W
Sbjct: 432 VNWIPDW 438


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 VGWLPKW 9
V W+P W
Sbjct: 432 VNWIPDW 438


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RVGWLPKW 9
+V W+P+W
Sbjct: 423 KVMWIPEW 430


>sp|HMD_METKA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 3 VGWLPK 8
+ WLPK
Sbjct: 157 ISWLPK 162


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RVGWLPKW 9
RV W P W
Sbjct: 430 RVSWYPDW 437


>sp|Y1188_METJA|UNCHARACTERIZED protein MJ1188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RVGWLPK 8
R+GW P+
Sbjct: 153 RIGWSPE 159


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LRVGWLPKW 9
+R+G+ P+W
Sbjct: 168 IRLGYRPEW 176


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 RVGWLPKW 9
RV W KW
Sbjct: 208 RVEWPAKW 215


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RVGWLPKWR 10
RV W +W+
Sbjct: 234 RVEWAARWK 242


>sp|SYK_THEAC|LYSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RVGWLPKW 9
RV W KW
Sbjct: 211 RVEWPAKW 218


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LRVGWLPKW 9
+R+G+ P+W
Sbjct: 142 IRLGYRPEW 150


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VGWLPKW 9
V W+P W
Sbjct: 438 VQWIPHW 444


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 RVGWLPKW 9
+V W P+W
Sbjct: 425 KVKWYPEW 432


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 RVGWLPKW 9
+V W P+W
Sbjct: 425 KVTWYPEW 432


>sp|GYAR_PYRHO|GLYOXYLATE reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VGWLPKW 9
V W PKW
Sbjct: 136 VAWHPKW 142


>sp|GYAR_PYRAB|GLYOXYLATE reductase|Pyrococcus abyssi (strain GE5 /

Query: 3 VGWLPKW 9
V W PKW
Sbjct: 137 VAWHPKW 143


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VGWLPKW 9
V W+P W
Sbjct: 429 VKWVPDW 435


>sp|RS17_NANEQ|SMALL ribosomal subunit protein uS17|Nanoarchaeum equitans (strain

Query: 1 LRVGWLPKW 9
+R WLPK+
Sbjct: 50 IRYYWLPKY 58


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RVGWLPKW 9
+V W P+W
Sbjct: 437 KVTWYPEW 444




15|SequenceR|80|71|CPRLRLRVGW

***** No hits found ******


16|SequenceR|85|76|AHALNCPRLR

>sp|G1PDH_METS5|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Metallosphaera sedula (strain ATCC 51363

Query: 2 HALNCPRL 9
HAL+C R+
Sbjct: 207 HALSCTRI 214


>sp|MOAA_PYRAB|PROBABLE GTP 3',8-cyclase|Pyrococcus abyssi (strain GE5 /

Query: 4 LNCPRLR 10
+NC RLR
Sbjct: 251 MNCTRLR 257


>sp|MOAA_PYRHO|PROBABLE GTP 3',8-cyclase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LNCPRLR 10
+NC RLR
Sbjct: 251 MNCTRLR 257


>sp|MOAA_PYRFU|PROBABLE GTP 3',8-cyclase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LNCPRLR 10
+NC RLR
Sbjct: 251 MNCTRLR 257


>sp|Y35K_HALSI|UNCHARACTERIZED 36 kDa protein|Halobacterium salinarum (Halobacterium halobium)

Query: 1 AHALNCP 7
AH NCP
Sbjct: 175 AHLRNCP 181


>sp|ILVC_HALWD|KETOL-ACID reductoisomerase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 1 AHALNCPR 8
AHA+ C R
Sbjct: 192 AHAIGCTR 199


>sp|FRHG_METJA|COENZYME F420 hydrogenase subunit gamma|Methanocaldococcus jannaschii

Query: 1 AHALNCPRLR 10
A ++ CPR+R
Sbjct: 212 ACSVQCPRIR 221




17|SequenceR|90|81|IVLTEAHALN

>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 1 IVLTEAHALN 10
+V+ E H+LN
Sbjct: 333 VVIDEIHSLN 342




18|SequenceR|95|86|KDRIEIVLTE

>sp|CSX1_METJA|CRISPR system endoribonuclease Csx1|Methanocaldococcus jannaschii (strain

Query: 1 KDRIEIVLTE 10
KD+IEI L E
Sbjct: 262 KDKIEIYLNE 271


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KDRIEIVL 8
KDR+E+VL
Sbjct: 26 KDRVEVVL 33


>sp|LIVF_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 1 KDRIEIVLT 9
K+RIEI L+
Sbjct: 110 KERIEIALS 118


>sp|HIS1_METS5|ATP phosphoribosyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 DRIEIVLT 9
DRI +VLT
Sbjct: 195 DRINLVLT 202


>sp|FLAB2_HALSA|FLAGELLIN B2|Halobacterium salinarum (strain ATCC 700922

Query: 2 DRIEIVL 8
DRIEIV+
Sbjct: 144 DRIEIVM 150




19|SequenceR|100|91|WSSDEKDRIE

>sp|AROC_METST|CHORISMATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 SSDEKDRIE 10
S DEKD++E
Sbjct: 58 SRDEKDKVE 66


>sp|PURP_IGNH4|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 WSSDEKDRIE 10
W SD+K ++E
Sbjct: 117 WESDQKKKME 126


>sp|AROD_METBF|3-DEHYDROQUINATE dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WSSDEKDRIE 10
W E DRIE
Sbjct: 81 WEGKEADRIE 90


>sp|FEOB_METJA|FE(2+) transporter FeoB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DEKDRI 9
DEKDRI
Sbjct: 413 DEKDRI 418


>sp|RAD50_SACS2|DNA double-strand break repair Rad50|Saccharolobus solfataricus

Query: 1 WSSDEKDRIE 10
+ S+EKD+IE
Sbjct: 72 YLSNEKDKIE 81


>sp|SYS_THEVO|SERINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 SDEKDRIE 10
S+EKDR+E
Sbjct: 70 SNEKDRVE 77


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 1 WSSDEKD 7
WS+ EKD
Sbjct: 291 WSNSEKD 297


>sp|TRPE_ARCFU|ANTHRANILATE synthase component 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SDEKDRIE 10
SDEK+R E
Sbjct: 255 SDEKERAE 262


>sp|PELO_SULTO|PROTEIN pelota homolog|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WSSDEKDRIE 10
SSDE++R+E
Sbjct: 289 LSSDEEERME 298


>sp|PELO_METTP|PROTEIN pelota homolog|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 WSSDEKDRIE 10
W DE RIE
Sbjct: 113 WRPDELQRIE 122


>sp|KAD6_ARCFU|PUTATIVE adenylate kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WSSDEKDRIE 10
W S+ +DRIE
Sbjct: 163 WLSELEDRIE 172




20|SequenceR|105|96|VTFLQWSSDE

>sp|NEP_NATMA|HALOLYSIN-LIKE extracellular serine protease Nep|Natrialba magadii

Query: 4 LQWSSDE 10
+QWS+D+
Sbjct: 245 IQWSADQ 251


>sp|HLY_NATA1|HALOLYSIN asiatica (strain ATCC 700177

Query: 4 LQWSSDE 10
+QWS+D+
Sbjct: 245 IQWSADQ 251




21|SequenceR|110|101|ETQVQVTFLQ

***** No hits found ******


22|SequenceR|115|106|GEGIAETQVQ

>sp|DNLI_PYRFU|DNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GEGIAETQVQ 10
EG+A+ QVQ
Sbjct: 208 NEGLAKVQVQ 217




23|SequenceR|120|111|SPELSGEGIA

>sp|LEU3_HALVD|3-ISOPROPYLMALATE dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 1 SPELSGEGIA 10
+P+++GEGIA
Sbjct: 256 APDIAGEGIA 265


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 1 SPELSGEGIA 10
+PE GEG+A
Sbjct: 451 TPEEGGEGVA 460


>sp|Y521_ARCFU|UNCHARACTERIZED N-acetyltransferase AF_0521|Archaeoglobus fulgidus (strain ATCC

Query: 2 PELSGEGIA 10
PE GEGI
Sbjct: 89 PEFRGEGIG 97


>sp|HICDH_PYRHO|ISOCITRATE/HOMOISOCITRATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SPELSGEGIA 10
+P+++G+GIA
Sbjct: 253 APDIAGKGIA 262


>sp|AKSF_METJA|HOMOISOCITRATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SPELSGEGIA 10
+P+++G+GIA
Sbjct: 272 APDIAGKGIA 281


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SPELSGEGIA 10
+PEL EG A
Sbjct: 966 TPELEAEGYA 975


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SPELSGEGIA 10
+PEL EG A
Sbjct: 966 TPELEAEGYA 975


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SPELSGEGIA 10
+PEL EG A
Sbjct: 966 TPELEAEGYA 975


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SPELSGEGI 9
+PEL GE I
Sbjct: 184 NPELKGEEI 192


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 1 SPELSGEGIA 10
SPE G+GI
Sbjct: 535 SPENQGKGIG 544


>sp|PDXT_METVS|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus vannielii (strain

Query: 2 PELSGEGI 9
PELS +GI
Sbjct: 166 PELSNDGI 173


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 1 SPELSGEGIA 10
SPE G+GI
Sbjct: 534 SPENQGKGIG 543


>sp|GGGPS_THEKO|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SPELSGE 7
SPEL+GE
Sbjct: 31 SPELAGE 37


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 SPELSGEGIA 10
SP+++GE +A
Sbjct: 48 SPKVAGEALA 57


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SPELSGEGIA 10
SP+++GE +A
Sbjct: 48 SPKVAGEALA 57


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 SPELSGEGIA 10
SP+++GE +A
Sbjct: 48 SPKVAGEALA 57


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 SPELSGEGIA 10
SP+++GE +A
Sbjct: 48 SPKVAGEALA 57


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 SPELSGEGIA 10
SP+++GE +A
Sbjct: 48 SPKVAGEALA 57


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 SPELSGEGIA 10
SP+++GE +A
Sbjct: 48 SPKVAGEALA 57


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 SPELSGEGIA 10
SP+++GE +A
Sbjct: 48 SPKVAGEALA 57


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 SPELSGEGIA 10
SP+++GE +A
Sbjct: 48 SPKVAGEALA 57


>sp|OGT_THEGJ|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PELSGEGI 9
PELS EG+
Sbjct: 82 PELSFEGV 89


>sp|PDXT_METM6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 2 PELSGEGI 9
PELS +GI
Sbjct: 166 PELSDDGI 173




24|SequenceR|125|116|AQSQPSPELS

>sp|Y398_METJA|UNCHARACTERIZED protein MJ0398|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PSPELS 10
PSPELS
Sbjct: 70 PSPELS 75


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 3 SQPSPELS 10
++PSPEL+
Sbjct: 598 NEPSPELA 605


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC 700893

Query: 1 AQSQPSPEL 9
A +QP PEL
Sbjct: 105 AWAQPPPEL 113




25|SequenceR|130|121|SRGDEAQSQP

>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 3 GDEAQSQ 9
GDEAQS+
Sbjct: 569 GDEAQSE 575


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 SRGDEAQSQP 10
SRG E ++QP
Sbjct: 965 SRGLEGEAQP 974


>sp|YPV5A_METTF|UNCHARACTERIZED protein ORF5A|Methanothermobacter thermautotrophicus

Query: 3 GDEAQSQP 10
G+EA+S+P
Sbjct: 220 GEEAKSKP 227




26|SequenceR|135|126|GVAAQSRGDE

***** No hits found ******


27|SequenceR|140|131|GEPVAGVAAQ

>sp|RPO1C_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus furiosus (strain ATCC

Query: 1 GEPVAGVAAQ 10
GEPV VAAQ
Sbjct: 63 GEPVGTVAAQ 72


>sp|RPO1C_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus gammatolerans (strain

Query: 1 GEPVAGVAAQ 10
GEP+ VAAQ
Sbjct: 61 GEPIGTVAAQ 70


>sp|EF2_KORCO|ELONGATION factor 2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GEPVAGVA 8
GEPV GVA
Sbjct: 582 GEPVMGVA 589


>sp|LIVG_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 2 EPVAGVA 8
EP+AGVA
Sbjct: 179 EPIAGVA 185


>sp|MRE11_THEAC|DNA double-strand break repair protein|Thermoplasma acidophilum

Query: 1 GEPVAGV 7
GEP AG+
Sbjct: 89 GEPAAGI 95


>sp|SEPS_METKA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 GEPVAGVAA 9
GEP+AG AA
Sbjct: 431 GEPLAGPAA 439


>sp|TRUD_HALSA|PROBABLE tRNA pseudouridine synthase D|Halobacterium salinarum (strain ATCC

Query: 1 GEPVAG 6
GEPVAG
Sbjct: 296 GEPVAG 301


>sp|TRUD_HALS3|PROBABLE tRNA pseudouridine synthase D|Halobacterium salinarum (strain ATCC

Query: 1 GEPVAG 6
GEPVAG
Sbjct: 296 GEPVAG 301


>sp|TRMY_HALMA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Haloarcula marismortui

Query: 1 GEPVAGVA 8
G+P+ GVA
Sbjct: 132 GDPIVGVA 139




28|SequenceR|145|136|TDKWAGEPVA

>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 3 KWAGEPVA 10
K+ GEPVA
Sbjct: 104 KYVGEPVA 111


>sp|MCR_METS5|MALONYL CoA reductase (NADP)|Metallosphaera sedula (strain ATCC 51363

Query: 2 DKWAGEP 8
D+WAG P
Sbjct: 300 DRWAGNP 306


>sp|Y1503_PYRHO|UPF0166 protein PH1503|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DKWAGEPV 9
DKW G P+
Sbjct: 20 DKWEGRPL 27


>sp|PURT_METAR|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocella arvoryzae

Query: 1 TDKWAGEPV 9
DKWAG+ +
Sbjct: 412 NDKWAGQEI 420


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 3 KWAGEPV 9
KW G PV
Sbjct: 607 KWTGRPV 613


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 1 TDKWAGEP 8
TD+W EP
Sbjct: 212 TDEWTAEP 219


>sp|OFOA2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 3 KWAGEPV 9
KW G P+
Sbjct: 596 KWTGRPI 602


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 1 TDKWAGEPV 9
TD W G+P+
Sbjct: 281 TDPWTGKPM 289


>sp|Y666_PYRAB|UPF0166 protein PYRAB06660|Pyrococcus abyssi (strain GE5 /

Query: 2 DKWAGEPV 9
D+W G+P+
Sbjct: 20 DRWEGKPL 27


>sp|SUCC_NATPD|SUCCINATE--COA ligase [ADP-forming] subunit beta|Natronomonas pharaonis (strain

Query: 2 DKWAGEPVA 10
D+ AG+PVA
Sbjct: 107 DRAAGKPVA 115


>sp|KTHY_HALLT|PROBABLE thymidylate kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 TDKWAGEPV 9
TD W GE V
Sbjct: 34 TDSWYGEAV 42


>sp|RS7_PICTO|SMALL ribosomal subunit protein uS7|Picrophilus torridus (strain ATCC

Query: 1 TDKWAGE 7
T+KW G+
Sbjct: 62 TEKWTGK 68


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 2 DKWAGEPV 9
D WAGE V
Sbjct: 887 DVWAGETV 894


>sp|Y3242_HALS3|UPF0284 protein OE_3242F|Halobacterium salinarum (strain ATCC 29341

Query: 4 WAGEPVA 10
AGEPVA
Sbjct: 191 LAGEPVA 197


>sp|Y1572_HALSA|UPF0284 protein VNG_1572C|Halobacterium salinarum (strain ATCC 700922

Query: 4 WAGEPVA 10
AGEPVA
Sbjct: 191 LAGEPVA 197


>sp|RS7_THEVO|SMALL ribosomal subunit protein uS7|Thermoplasma volcanium (strain ATCC

Query: 1 TDKWAGE 7
T+KW G+
Sbjct: 59 TEKWTGK 65


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 KWAGEPV 9
+W GEPV
Sbjct: 103 EWEGEPV 109


>sp|RS11_CENSY|SMALL ribosomal subunit protein uS11|Cenarchaeum symbiosum (strain A)

Query: 1 TDKWAGEPVA 10
T+ AGEP A
Sbjct: 4 TEAGAGEPAA 13




29|SequenceR|150|141|KHLQATDKWA

>sp|RL14E_DESA1|LARGE ribosomal subunit protein eL14|Desulfurococcus amylolyticus

Query: 1 KHLQATDK 8
KHL+ TDK
Sbjct: 52 KHLEPTDK 59


>sp|Y692_METTH|UNCHARACTERIZED protein MTH_692|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 QATDKWA 10
+ATDKW
Sbjct: 143 EATDKWG 149


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KHLQATDKW 9
+ LQA D+W
Sbjct: 181 RFLQAADEW 189


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 KHLQATDKW 9
KHL+ +KW
Sbjct: 1391 KHLRIKNKW 1399


>sp|PRIS_PYRHO|DNA primase small subunit PriS|Pyrococcus horikoshii (strain ATCC

Query: 2 HLQATDKWA 10
H++ D+WA
Sbjct: 151 HIRVLDEWA 159


>sp|PRIS_THEKO|DNA primase small subunit PriS|Thermococcus kodakarensis (strain ATCC

Query: 2 HLQATDKWA 10
H++ D+WA
Sbjct: 155 HIRVIDEWA 163


>sp|RL14E_METVS|LARGE ribosomal subunit protein eL14|Methanococcus vannielii (strain

Query: 1 KHLQATDK 8
KH++ TDK
Sbjct: 47 KHVEPTDK 54


>sp|RL14E_METMP|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 1 KHLQATDK 8
KH++ TDK
Sbjct: 47 KHVEPTDK 54


>sp|RL14E_METM7|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 1 KHLQATDK 8
KH++ TDK
Sbjct: 47 KHVEPTDK 54


>sp|RL14E_METM6|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 1 KHLQATDK 8
KH++ TDK
Sbjct: 47 KHVEPTDK 54


>sp|RL14E_METM5|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 1 KHLQATDK 8
KH + TDK
Sbjct: 47 KHFEPTDK 54


>sp|PRIS_PYRFU|DNA primase small subunit PriS|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HLQATDKWA 10
H++ D+WA
Sbjct: 151 HIRILDEWA 159


>sp|PRIS_THEON|DNA primase small subunit PriS|Thermococcus onnurineus (strain NA1)

Query: 2 HLQATDKWA 10
H++ D WA
Sbjct: 155 HIRVLDDWA 163


>sp|RL14E_METJA|LARGE ribosomal subunit protein eL14|Methanocaldococcus jannaschii

Query: 1 KHLQATDK 8
KHL+ T+K
Sbjct: 47 KHLEPTEK 54


>sp|PRIS_THESM|DNA primase small subunit PriS|Thermococcus sibiricus (strain DSM 12597

Query: 2 HLQATDKWA 10
H++ D WA
Sbjct: 153 HIRVLDDWA 161


>sp|SPSS2_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LQATDKWA 10
L TD+WA
Sbjct: 288 LATTDEWA 295




30|SequenceR|155|146|VAEESKHLQA

***** No hits found ******


31|SequenceR|160|151|KQGVSVAEES

>sp|COABC_THEKO|COENZYME A biosynthesis bifunctional protein|Thermococcus kodakarensis

Query: 1 KQGVSVAEES 10
K GV++AEE+
Sbjct: 222 KMGVAIAEEA 231




32|SequenceR|165|156|YRLVRKQGVS

>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 1 YRLVRKQGV 9
+RLVR++GV
Sbjct: 271 FRLVREKGV 279


>sp|PDXT_HALLT|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Halorubrum lacusprofundi

Query: 2 RLVRKQGV 9
RL+R++G+
Sbjct: 59 RLIRREGI 66


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 YRLVRKQGVS 10
Y L++K G+S
Sbjct: 102 YELMKKYGIS 111


>sp|PTH_METTH|PEPTIDYL-TRNA hydrolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 YRLVRKQGVS 10
YR V++ G+S
Sbjct: 63 YRAVKEAGIS 72


>sp|RADA_METST|DNA repair and recombination protein|Methanosphaera stadtmanae (strain

Query: 1 YRLVRKQGVS 10
YR++ K+G+S
Sbjct: 273 YRILLKKGLS 282


>sp|CAS6A_METJA|CRISPR-ASSOCIATED endoribonuclease Cas6 1|Methanocaldococcus jannaschii (strain

Query: 2 RLVRKQGV 9
R++RK+G+
Sbjct: 65 RVIRKEGI 72




33|SequenceR|170|161|GQFLYYRLVR

>sp|RL3_METLZ|LARGE ribosomal subunit protein uL3|Methanocorpusculum labreanum (strain

Query: 1 GQFLYYRLVR 10
G FL+Y LVR
Sbjct: 278 GGFLHYGLVR 287


>sp|RL3_METMJ|LARGE ribosomal subunit protein uL3|Methanoculleus marisnigri (strain

Query: 1 GQFLYYRLVR 10
G FL+Y LVR
Sbjct: 282 GGFLHYGLVR 291


>sp|RPO5_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermococcus gammatolerans (strain

Query: 1 GQFLYYRLV 9
G +LYYRLV
Sbjct: 71 GVYLYYRLV 79


>sp|RL3_METAR|LARGE ribosomal subunit protein uL3|Methanocella arvoryzae (strain DSM

Query: 1 GQFLYYRLVR 10
G FL+Y L+R
Sbjct: 282 GGFLHYGLIR 291


>sp|RPO5_METM5|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanococcus maripaludis (strain C5

Query: 1 GQFLYYRLV 9
G+ YYRLV
Sbjct: 65 GETTYYRLV 73


>sp|VHUD_METVO|F420-NON-REDUCING hydrogenase vhu iron-sulfur subunit|Methanococcus voltae

Query: 1 GQFLYYRLVR 10
G+FLYY ++
Sbjct: 42 GKFLYYLRIK 51


>sp|RPO5_METMP|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanococcus maripaludis (strain DSM

Query: 1 GQFLYYRLV 9
G+ YYRLV
Sbjct: 65 GESTYYRLV 73


>sp|RPO5_METM7|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanococcus maripaludis (strain C7

Query: 1 GQFLYYRLV 9
G+ YYRLV
Sbjct: 65 GESTYYRLV 73


>sp|RPO5_METM6|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanococcus maripaludis (strain C6

Query: 1 GQFLYYRLV 9
G+ YYRLV
Sbjct: 65 GESTYYRLV 73


>sp|RPO5_THESM|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermococcus sibiricus (strain DSM

Query: 1 GQFLYYRLV 9
G + YYR+V
Sbjct: 71 GVYYYYRIV 79


>sp|RPO5_META3|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanococcus aeolicus (strain ATCC

Query: 1 GQFLYYRLV 9
G YYRLV
Sbjct: 65 GHATYYRLV 73


>sp|RPO5_METVS|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanococcus vannielii (strain ATCC

Query: 1 GQFLYYRLV 9
G+ +Y+RLV
Sbjct: 65 GETVYFRLV 73


>sp|RPO5_METBF|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanosarcina barkeri (strain Fusaro

Query: 1 GQFLYYRLV 9
G+ YYRLV
Sbjct: 68 GEAEYYRLV 76


>sp|DHYS_HALSA|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GQFLYY 6
G FLYY
Sbjct: 210 GNFLYY 215


>sp|DHYS_HALS3|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GQFLYY 6
G FLYY
Sbjct: 210 GNFLYY 215


>sp|RPO5_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo5|Archaeoglobus fulgidus (strain ATCC

Query: 1 GQFLYYRLV 9
G+ ++YRLV
Sbjct: 67 GESVFYRLV 75


>sp|RPO5_THEON|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermococcus onnurineus (strain NA1)

Query: 1 GQFLYYRLV 9
G + YYRLV
Sbjct: 71 GYYYYYRLV 79


>sp|RPO5_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermococcus kodakarensis (strain

Query: 1 GQFLYYRLV 9
G + YYRLV
Sbjct: 71 GYYYYYRLV 79


>sp|RPO5_THECE|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermococcus celer

Query: 1 GQFLYYRLV 9
G + YYRLV
Sbjct: 71 GYYYYYRLV 79




34|SequenceR|175|166|WIYRQGQFLY

>sp|RS3A_METMA|SMALL ribosomal subunit protein eS1|Methanosarcina mazei (strain ATCC

Query: 2 IYRQGQFLY 10
IYRQ +F+Y
Sbjct: 170 IYRQAKFIY 178


>sp|RS3A_METBF|SMALL ribosomal subunit protein eS1|Methanosarcina barkeri (strain Fusaro

Query: 2 IYRQGQFLY 10
IYRQ +F+Y
Sbjct: 170 IYRQAKFIY 178


>sp|RS3A_METAC|SMALL ribosomal subunit protein eS1|Methanosarcina acetivorans (strain

Query: 2 IYRQGQFLY 10
IYRQ +F+Y
Sbjct: 170 IYRQAKFIY 178


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 WIYRQGQF 8
W+ R+G+F
Sbjct: 18 WVLREGEF 25


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 WIYRQGQF 8
W+ R+G+F
Sbjct: 18 WVLREGEF 25


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 WIYRQGQF 8
W+ R+G+F
Sbjct: 18 WVLREGEF 25


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 WIYRQGQF 8
W+ R+G+F
Sbjct: 18 WVLREGEF 25


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 WIYRQGQF 8
W+ R+G+F
Sbjct: 18 WVLREGEF 25


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 WIYRQGQF 8
W+ R+G+F
Sbjct: 18 WVLREGEF 25


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IYRQGQFL 9
+YRQG F+
Sbjct: 155 VYRQGNFV 162


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WIYRQGQF 8
W+ R+G+F
Sbjct: 18 WVLREGEF 25


>sp|MTRC_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus vannielii (strain ATCC

Query: 1 WIYRQGQFL 9
WIY G F+
Sbjct: 241 WIYTYGSFV 249


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WIYRQGQFL 9
W ++ GQF+
Sbjct: 48 WTFKPGQFV 56


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 1 WIYRQGQF 8
W Y +G+F
Sbjct: 313 WAYEKGKF 320


>sp|COFD_METVS|2-PHOSPHO-L-LACTATE transferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 WIYRQG 6
WI+R+G
Sbjct: 157 WIFRKG 162


>sp|COFD_METM7|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain C7 /

Query: 1 WIYRQG 6
WI+R+G
Sbjct: 157 WIFRKG 162


>sp|COFD_METM6|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain C6 /

Query: 1 WIYRQG 6
WI+R+G
Sbjct: 157 WIFRKG 162


>sp|COFD_METM5|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain C5 /

Query: 1 WIYRQG 6
WI+R+G
Sbjct: 157 WIFRKG 162


>sp|IF2P_PYRCJ|PROBABLE translation initiation factor IF-2|Pyrobaculum calidifontis (strain

Query: 1 WIYRQGQFL 9
W++R Q+L
Sbjct: 565 WLFRYKQYL 573


>sp|NDK_PYRAB|NUCLEOSIDE diphosphate kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 WIYRQG 6
W YR+G
Sbjct: 153 WFYRKG 158


>sp|RL3_STAMF|LARGE ribosomal subunit protein uL3|Staphylothermus marinus (strain ATCC

Query: 2 IYRQGQFL 9
++R+GQF+
Sbjct: 250 VFREGQFI 257


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WIYRQGQFLY 10
W+ R G+ Y
Sbjct: 136 WVKRNGKIYY 145


>sp|MTRC_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain DSM

Query: 1 WIYRQGQFL 9
W+Y G F+
Sbjct: 234 WLYTYGSFV 242




35|SequenceR|180|171|QQTEIWIYRQ

>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 6 WIYRQ 10
WIYRQ
Sbjct: 401 WIYRQ 405


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 6 WIYRQ 10
WIYRQ
Sbjct: 402 WIYRQ 406


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 6 WIYRQ 10
WIYRQ
Sbjct: 401 WIYRQ 405


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 6 WIYRQ 10
WIYRQ
Sbjct: 414 WIYRQ 418


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 6 WIYRQ 10
W+YRQ
Sbjct: 405 WVYRQ 409


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 6 WIYRQ 10
W+YRQ
Sbjct: 400 WVYRQ 404


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 6 WIYRQ 10
W+YRQ
Sbjct: 400 WVYRQ 404


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 6 WIYRQ 10
W+YRQ
Sbjct: 402 WVYRQ 406


>sp|PURL_HALSA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 700922

Query: 6 WIYRQ 10
W+YRQ
Sbjct: 399 WVYRQ 403


>sp|PURL_HALS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 29341

Query: 6 WIYRQ 10
W+YRQ
Sbjct: 399 WVYRQ 403


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 6 WIYRQ 10
W+YRQ
Sbjct: 405 WVYRQ 409


>sp|PURL_HALLT|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halorubrum lacusprofundi (strain ATCC 49239

Query: 6 WIYRQ 10
W+YRQ
Sbjct: 432 WVYRQ 436




36|SequenceR|185|176|VQYFAQQTEI

>sp|TRPG_HALVD|ANTHRANILATE synthase component 2|Haloferax volcanii (strain ATCC 29605

Query: 1 VQYFAQQT 8
V+YF++QT
Sbjct: 18 VEYFSEQT 25


>sp|GLCT_SACS2|GLUCOSE import system permease protein|Saccharolobus solfataricus (strain

Query: 1 VQYFAQQTEI 10
V+YF+Q T +
Sbjct: 251 VEYFSQATAV 260




37|SequenceR|190|181|HDLLSVQYFA

>sp|Y1136_SULTO|PUTATIVE ABC transporter ATP-binding protein|Sulfurisphaera tokodaii (strain

Query: 1 HDLLSVQYFA 10
HD L V Y+A
Sbjct: 439 HDPLFVYYYA 448


>sp|TRUB_PYRFU|PROBABLE tRNA pseudouridine synthase B|Pyrococcus furiosus (strain ATCC

Query: 1 HDLLSVQYF 9
HDL+ YF
Sbjct: 218 HDLVDYYYF 226




38|SequenceR|195|186|DCSRGHDLLS

>sp|PORB_METJA|PYRUVATE synthase subunit PorB|Methanocaldococcus jannaschii (strain ATCC

Query: 4 RGHDLL 9
RGHD+L
Sbjct: 123 RGHDIL 128


>sp|Y979_METVS|UPF0179 protein Mevan_0979|Methanococcus vannielii (strain ATCC 35089

Query: 1 DCSRGHDL 8
DC +GH L
Sbjct: 128 DCQKGHSL 135


>sp|AMT2_METJA|AMMONIUM transporter Amt2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CSRGHDL 8
CS+G DL
Sbjct: 90 CSKGFDL 96




39|SequenceR|200|191|SRHVDDCSRG

>sp|LYSZ_PYRFU|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrococcus furiosus

Query: 1 SRHVDDCSR 9
SRHVD+ SR
Sbjct: 37 SRHVDELSR 45


>sp|DHYS2_ARCFU|PROBABLE deoxyhypusine synthase 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 SRHVDDC 7
S HV+DC
Sbjct: 81 SEHVNDC 87


>sp|TPIS_THEVO|TRIOSEPHOSPHATE isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SRHVDDCSRG 10
S+HVDD G
Sbjct: 56 SQHVDDVGYG 65


>sp|ADEC_METMJ|ADENINE deaminase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 HVDDCSR 9
H+DDC R
Sbjct: 240 HIDDCVR 246


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 2 RHVDDC 7
+H+DDC
Sbjct: 332 KHLDDC 337


>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 6 DCSRG 10
DCSRG
Sbjct: 624 DCSRG 628


>sp|DCHI_THEKO|DIACETYLCHITOBIOSE deacetylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 HVDDCSRG 10
H DDC+ G
Sbjct: 40 HPDDCAIG 47




40|SequenceR|205|196|SLGHRSRHVD

>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 2 LGHRSRHV 9
LGHR+R V
Sbjct: 42 LGHRNRRV 49


>sp|GMSS2_HALMA|GLUTAMATE mutase sigma subunit 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 LGHRSR 7
LGHRSR
Sbjct: 131 LGHRSR 136


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LGHRSRHVD 10
LGH H D
Sbjct: 612 LGHEKSHYD 620




41|SequenceR|210|201|MQDQLSLGHR

>sp|COAD_THEKO|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 DQLSLGHR 10
D+L LGH+
Sbjct: 15 DRLHLGHK 22


>sp|COAD_THEGJ|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 DQLSLGHR 10
D+L LGH+
Sbjct: 15 DRLHLGHK 22


>sp|COAD_PYRHO|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DQLSLGHR 10
D+L LGH+
Sbjct: 14 DRLHLGHK 21


>sp|COAD_PYRAB|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 DQLSLGHR 10
D+L LGH+
Sbjct: 14 DRLHLGHK 21


>sp|COAD_PYRFU|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DQLSLGHR 10
D+L LGH+
Sbjct: 15 DRLHLGHK 22




42|SequenceR|215|206|IAKRVMQDQL

>sp|PUR2_METBF|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 AKRVMQDQL 10
AK++MQD +
Sbjct: 249 AKKIMQDTV 257


>sp|Y1571_ARCFU|UNCHARACTERIZED protein AF_1571|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IAKRVMQD 8
IAK V+QD
Sbjct: 315 IAKEVLQD 322


>sp|HPCAL_NITMS|3-HYDROXYPROPIONATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 IAKRVMQDQ 9
+AKRVM+++
Sbjct: 473 VAKRVMKEK 481


>sp|TKTC_METJA|PUTATIVE transketolase C-terminal section|Methanocaldococcus jannaschii

Query: 1 IAKRVMQD 8
IAKR+M++
Sbjct: 305 IAKRIMEE 312


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 1 IAKRVMQDQL 10
+A R+M+D+L
Sbjct: 316 VAARLMRDEL 325


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 1 IAKRVMQDQ 9
IA +VMQD+
Sbjct: 333 IALKVMQDE 341




43|SequenceR|220|211|VNPGYIAKRV

>sp|TNAA_HALSA|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VNPGYIAKRV 10
V P Y+A+RV
Sbjct: 307 VEPPYVAERV 316


>sp|TNAA_HALS3|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VNPGYIAKRV 10
V P Y+A+RV
Sbjct: 307 VEPPYVAERV 316


>sp|RS4_METTH|SMALL ribosomal subunit protein uS4|Methanothermobacter

Query: 3 PGYIAKR 9
PGYI KR
Sbjct: 140 PGYIVKR 146


>sp|RS4_METS5|SMALL ribosomal subunit protein uS4|Metallosphaera sedula (strain ATCC

Query: 2 NPGYIAKR 9
+PGYI KR
Sbjct: 140 SPGYIVKR 147


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 VNPGYIAKR 9
+ PGYI +R
Sbjct: 396 LKPGYIVER 404


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 VNPGYIAKRV 10
VN G IAK++
Sbjct: 842 VNAGEIAKKI 851


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 VNPGYIAKR 9
+ PGYI +R
Sbjct: 396 LKPGYIVER 404


>sp|RS4_IGNH4|SMALL ribosomal subunit protein uS4|Ignicoccus hospitalis (strain KIN4/I

Query: 2 NPGYIAKR 9
+PGYI +R
Sbjct: 139 SPGYIVRR 146


>sp|SYR_METMA|ARGININE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NPGYIAK 8
NPGYI +
Sbjct: 203 NPGYIKE 209


>sp|NQOR_ARCFU|NAD(P)H dehydrogenase (quinone)|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NPGYIAKR 9
NPGY+ R
Sbjct: 50 NPGYVKVR 57


>sp|PUS10_PYRFU|TRNA pseudouridine synthase Pus10|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VNPGYIAKR 9
VNP Y+A R
Sbjct: 157 VNPIYVAGR 165


>sp|RELE3_METJA|TOXIN RelE3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PGYIAKRV 10
PG+I KR+
Sbjct: 17 PGHIRKRI 24


>sp|RS4_STAMF|SMALL ribosomal subunit protein uS4|Staphylothermus marinus (strain ATCC

Query: 2 NPGYIAKR 9
+PGYI R
Sbjct: 139 SPGYIVSR 146


>sp|GLNA_ARCFU|GLUTAMINE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GYIAKR 9
GY+AKR
Sbjct: 121 GYVAKR 126


>sp|RNH2_METJA|RIBONUCLEASE HII|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NPGYIAKRV 10
N GY+ KR+
Sbjct: 58 NLGYVEKRI 66


>sp|CS3HE_THETK|CRISPR-ASSOCIATED helicase Cas3|Thermoproteus tenax (strain ATCC 35583

Query: 4 GYIAKRV 10
GY+A+RV
Sbjct: 145 GYLARRV 151


>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VNPGYIAK 8
VNP Y A+
Sbjct: 385 VNPNYFAR 392


>sp|RS3_PYRFU|SMALL ribosomal subunit protein uS3|Pyrococcus furiosus (strain ATCC

Query: 2 NPGYIAKR 9
NPGY+ R
Sbjct: 50 NPGYVIGR 57


>sp|RS3_PYRAB|SMALL ribosomal subunit protein uS3|Pyrococcus abyssi (strain GE5 /

Query: 2 NPGYIAKR 9
NPGY+ R
Sbjct: 50 NPGYVIGR 57


>sp|Y1318_METJA|UNCHARACTERIZED protein MJ1318|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GYIAKRV 10
GY+A+RV
Sbjct: 594 GYLARRV 600


>sp|RS3_THEVO|SMALL ribosomal subunit protein uS3|Thermoplasma volcanium (strain ATCC

Query: 1 VNPGYIAKRV 10
+NP IAK++
Sbjct: 89 LNPSVIAKKI 98


>sp|RS3_THEON|SMALL ribosomal subunit protein uS3|Thermococcus onnurineus (strain

Query: 2 NPGYIAKR 9
NPGY+ R
Sbjct: 50 NPGYVIGR 57


>sp|RS3_THEAC|SMALL ribosomal subunit protein uS3|Thermoplasma acidophilum (strain

Query: 1 VNPGYIAKRV 10
+NP IAK++
Sbjct: 89 LNPSVIAKKI 98


>sp|DPHB_PYRIL|DIPHTHINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PGYIAKR 9
PGYI +R
Sbjct: 11 PGYITER 17


>sp|RS3_PYRHO|SMALL ribosomal subunit protein uS3|Pyrococcus horikoshii (strain ATCC

Query: 2 NPGYIAKR 9
NPGY+ R
Sbjct: 50 NPGYVIGR 57


>sp|RS3_THEKO|SMALL ribosomal subunit protein uS3|Thermococcus kodakarensis (strain

Query: 2 NPGYIAKR 9
NPGY+ R
Sbjct: 50 NPGYVIGR 57




44|SequenceR|225|216|VPISIVNPGY

>sp|KAE1B_METLZ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 VPI--SIVNPGY 10
+PI S+VNPG+
Sbjct: 302 IPIAESVVNPGF 313


>sp|COFH_METHJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanospirillum hungatei JF-1 (strain

Query: 1 VPISIVNPG 9
VP+S ++PG
Sbjct: 252 VPLSFIHPG 260


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VPISIVNPGY 10
+PI +V+ GY
Sbjct: 221 IPIKVVDTGY 230


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VPISIVNPGY 10
+P+ IV+ GY
Sbjct: 228 IPLKIVDTGY 237


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VPISIVNPGY 10
+P+ IV+ GY
Sbjct: 224 IPLKIVDTGY 233


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VPISIVNPGY 10
+P+ IV+ GY
Sbjct: 220 IPLKIVDTGY 229


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VPISIVNPGY 10
+P+ IV+ GY
Sbjct: 228 IPLKIVDTGY 237


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 VPISIVNPGY 10
+P+ IV+ GY
Sbjct: 228 IPLKIVDTGY 237


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 VPISIVNPGY 10
+P+ IV+ GY
Sbjct: 228 IPLKIVDTGY 237


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 VPISIVNPGY 10
+P+ IV+ GY
Sbjct: 228 IPLKIVDTGY 237


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPISIVNPGY 10
+P+ IV+ GY
Sbjct: 226 IPLKIVDTGY 235


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VPISIVNPGY 10
+P+ IV+ GY
Sbjct: 214 IPLKIVDTGY 223


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 2 PISIVNPGY 10
PI++V PG+
Sbjct: 515 PIALVEPGF 523


>sp|BIOB_META3|BIOTIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VPISIVNP 8
+PI+I NP
Sbjct: 227 IPINIYNP 234


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 1 VPISIVNPGY 10
+P+ + NPG+
Sbjct: 336 MPVKLKNPGW 345


>sp|RS9_META3|SMALL ribosomal subunit protein uS9|Methanococcus aeolicus (strain ATCC

Query: 2 PISIVNPGY 10
PI IV P Y
Sbjct: 32 PIEIVEPKY 40


>sp|RS9_METJA|SMALL ribosomal subunit protein uS9|Methanocaldococcus jannaschii

Query: 1 VPISIVNPGY 10
+PI ++ P Y
Sbjct: 32 IPIELIEPKY 41


>sp|CSG_HALSA|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 700922

Query: 1 VPISIVNPG 9
VP+S V PG
Sbjct: 742 VPLSNVEPG 750


>sp|CSG_HALS3|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 29341

Query: 1 VPISIVNPG 9
VP+S V PG
Sbjct: 742 VPLSNVEPG 750


>sp|PTFC_HALVD|PTS system fructose-specific EIIC component|Haloferax volcanii (strain

Query: 1 VPISIVNPG 9
VPISI N G
Sbjct: 181 VPISIANAG 189


>sp|BIOB_NATPD|BIOTIN synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VPISIVNP 8
+P++I+NP
Sbjct: 237 LPVNILNP 244


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 VPISIVNPGY 10
+PI IV+ GY
Sbjct: 231 MPIRIVDTGY 240


>sp|MCRB_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PISIVNPGY 10
P+S+ PGY
Sbjct: 185 PLSLEGPGY 193


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPISIVNPG 9
VPI I+N G
Sbjct: 163 VPIEIINTG 171


>sp|EPDA_METMP|MINOR structural pilin EpdA|Methanococcus maripaludis (strain DSM 14266

Query: 3 ISIVNPGY 10
+S+VN GY
Sbjct: 55 VSLVNSGY 62




45|SequenceR|230|221|QPYSKVPISI

>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QPYSKVPIS 9
+PY K+P+S
Sbjct: 617 KPYRKLPLS 625


>sp|Y630_METJA|PUTATIVE phosphate permease MJ0630|Methanocaldococcus jannaschii (strain

Query: 3 YSKVPISI 10
Y KVPIS+
Sbjct: 90 YKKVPISL 97


>sp|AROA_METST|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 2 PYSKVPISI 10
PYSK P+++
Sbjct: 179 PYSKKPVTL 187


>sp|RRP42_PYRFU|EXOSOME complex component Rrp42|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PYSKVPISI 10
P K+PIS+
Sbjct: 188 PVEKIPISV 196


>sp|SYT_METMA|THREONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QPYSKVPIS 9
+PY K+P++
Sbjct: 616 KPYRKLPLA 624


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QPYSKVPIS 9
+PY K+P++
Sbjct: 617 KPYRKLPLA 625




46|SequenceR|235|226|EDVLLQPYSK

>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 1 EDVLLQPYSK 10
ED LL+PY K
Sbjct: 618 EDCLLEPYQK 627


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EDVLLQPYSK 10
ED LL+PY K
Sbjct: 618 EDSLLEPYQK 627


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EDVLLQPYSK 10
ED LL+PY K
Sbjct: 618 EDSLLEPYQK 627


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 EDVLLQPYSK 10
+D LL+PY K
Sbjct: 618 DDTLLEPYQK 627


>sp|TFE_NANEQ|TRANSCRIPTION factor E|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 DVLLQPYSK 10
D LL+PY K
Sbjct: 88 DTLLEPYKK 96


>sp|Y455_METJA|UNCHARACTERIZED protein MJ0455|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DVLLQPYSK 10
D+L Q YSK
Sbjct: 151 DILFQKYSK 159


>sp|THII_DESA1|TRNA sulfurtransferase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 4 LLQPYSK 10
LL+PYSK
Sbjct: 128 LLKPYSK 134


>sp|DCD_THEGJ|DCTP deaminase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EDVLLQPYSK 10
+++L++P+SK
Sbjct: 10 KEILIEPFSK 19


>sp|MOAA_METMA|PROBABLE GTP 3',8-cyclase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EDVLLQPYSK 10
E+VL+ PY +
Sbjct: 18 EEVLVDPYGR 27


>sp|TSR3_SULTO|16S rRNA aminocarboxypropyltransferase|Sulfurisphaera tokodaii

Query: 3 VLLQPYSK 10
++L PYSK
Sbjct: 36 IILDPYSK 43


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DVLLQPYSK 10
D+L++PY +
Sbjct: 916 DILIEPYDE 924




47|SequenceR|240|231|YPNLAEDVLL

>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YPNLAEDVL 9
YPNL EDVL
Sbjct: 272 YPNLKEDVL 280


>sp|ARGC_METBF|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YPNLAEDVL 9
YPNLAE+++
Sbjct: 187 YPNLAENII 195


>sp|ARGC_METTP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YPNLAEDV 8
YPNLAE++
Sbjct: 187 YPNLAENI 194


>sp|ARGC_METMA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YPNLAEDVL 9
YPNLAE+++
Sbjct: 190 YPNLAENIV 198


>sp|ARGC_METAC|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YPNLAEDVL 9
YPN+AE+++
Sbjct: 186 YPNIAENII 194


>sp|Y3507_METJA|UNCHARACTERIZED protein MJECL07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YPNLAEDV 8
YP+LAED+
Sbjct: 146 YPDLAEDL 153


>sp|RS15_METBF|SMALL ribosomal subunit protein uS15|Methanosarcina barkeri (strain

Query: 1 YPNLAEDV 8
YPN+ ED+
Sbjct: 81 YPNVPEDL 88


>sp|BTUFA_HALSA|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 700922

Query: 1 YPNLAEDVLL 10
YP L+E+V++
Sbjct: 239 YPQLSEEVIV 248


>sp|BTUFA_HALS3|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 29341

Query: 1 YPNLAEDVLL 10
YP L+E+V++
Sbjct: 239 YPQLSEEVIV 248


>sp|AROA_PYRFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YPNLAEDVL 9
YPN ED++
Sbjct: 394 YPNFFEDLM 402


>sp|LEU3_HALVD|3-ISOPROPYLMALATE dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 2 PNLAEDVL 9
PNLA DVL
Sbjct: 216 PNLAGDVL 223


>sp|HTR4_HALSA|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 700922

Query: 3 NLAEDVLL 10
N+AE+VLL
Sbjct: 293 NMAENVLL 300


>sp|HTR4_HALS3|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 29341

Query: 3 NLAEDVLL 10
N+AE+VLL
Sbjct: 293 NMAENVLL 300


>sp|RS15_METJA|SMALL ribosomal subunit protein uS15|Methanocaldococcus jannaschii

Query: 1 YPNLAEDVL 9
YP + ED+L
Sbjct: 81 YPKVPEDLL 89


>sp|METK_PYRCJ|S-ADENOSYLMETHIONINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 YPNLAEDV 8
YP + EDV
Sbjct: 192 YPEVGEDV 199


>sp|OGT_PYRHO|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YPNLAEDVL 9
YP+L DVL
Sbjct: 64 YPDLVFDVL 72


>sp|METK_CALMQ|S-ADENOSYLMETHIONINE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 YPNLAEDV 8
YP + EDV
Sbjct: 197 YPEVGEDV 204


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YPNLAEDV 8
YP + EDV
Sbjct: 275 YPEIIEDV 282


>sp|PANB_NITMS|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 YPNLAEDVL 9
Y NL+ED++
Sbjct: 233 YMNLSEDIV 241


>sp|KAE1B_THEAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 NLAEDVL 9
NLA+DVL
Sbjct: 510 NLADDVL 516


>sp|CCA_PYRAB|CCA-ADDING enzyme|Pyrococcus abyssi (strain GE5 /

Query: 2 PNLAEDVLL 10
PNL +D+++
Sbjct: 304 PNLVDDIII 312


>sp|Y077_METJA|UNCHARACTERIZED protein MJ0077|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YPNLAEDVLL 10
Y N AE++L
Sbjct: 190 YKNFAEEILF 199


>sp|METK_PYRIL|S-ADENOSYLMETHIONINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YPNLAEDV 8
YP + EDV
Sbjct: 192 YPEVGEDV 199


>sp|PDXT_METST|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosphaera stadtmanae

Query: 1 YPNLAEDVLL 10
+P L ED L+
Sbjct: 170 HPELTEDTLI 179


>sp|METK_PYRAE|S-ADENOSYLMETHIONINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YPNLAEDV 8
YP + EDV
Sbjct: 192 YPEVGEDV 199


>sp|METK_PYRNV|S-ADENOSYLMETHIONINE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 YPNLAEDV 8
YP + EDV
Sbjct: 192 YPEVGEDV 199


>sp|MPTA_ARCFU|GTP cyclohydrolase MptA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YPNLAEDVLL 10
+PN +D+L+
Sbjct: 265 FPNAPDDILV 274


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 3 NLAEDVLL 10
NLAEDV L
Sbjct: 638 NLAEDVNL 645


>sp|HYPA_IGNH4|HYDROGENASE maturation factor HypA|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YPNLAEDVL 9
YP+L +D+L
Sbjct: 101 YPHLVKDLL 109


>sp|RPO11_METJA|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanocaldococcus jannaschii

Query: 2 PNLAEDVLL 10
PNL +D+LL
Sbjct: 25 PNLLKDILL 33


>sp|CCA_PYRHO|CCA-ADDING enzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PNLAEDVLL 10
P L +D+LL
Sbjct: 305 PKLVDDILL 313




48|SequenceR|245|236|AQFGYYPNLA

>sp|Y1031_SACS2|UNCHARACTERIZED solute-binding protein SSO1031|Saccharolobus solfataricus (strain

Query: 2 QFGYYPN 8
FGYYPN
Sbjct: 298 SFGYYPN 304


>sp|Y2034_SULTO|UNCHARACTERIZED solute-binding protein STK_20340|Sulfurisphaera tokodaii (strain

Query: 3 FGYYPN 8
FGYYPN
Sbjct: 272 FGYYPN 277


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QFGYYP 7
+FG+YP
Sbjct: 66 EFGFYP 71


>sp|ARGC_METBF|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina barkeri (strain Fusaro /

Query: 2 QFGYYPNLA 10
Q +YPNLA
Sbjct: 183 QNSHYPNLA 191


>sp|FTSZ2_ARCFU|CELL division protein FtsZ 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 YYPNL 9
YYPNL
Sbjct: 189 YYPNL 193


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 5 YYPNL 9
YYPNL
Sbjct: 1301 YYPNL 1305


>sp|Y672_PYRHO|UPF0252 protein PH0672|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AQFGYYP 7
+ FG+YP
Sbjct: 199 SNFGFYP 205


>sp|KADA_PYRAE|ADENYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 GYYPNL 9
GYYP L
Sbjct: 92 GYYPGL 97


>sp|HISX_METMA|HISTIDINOL dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AQFGYYPN 8
A+FGY P+
Sbjct: 425 ARFGYRPS 432


>sp|SPSS2_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 QFGYYPNL 9
+FGY P L
Sbjct: 150 EFGYAPKL 157


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QFGYYPNL 9
QFG YP L
Sbjct: 495 QFGSYPLL 502


>sp|ARGC_METTP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 YYPNLA 10
+YPNLA
Sbjct: 186 HYPNLA 191


>sp|AMZA_PYRAE|ARCHAEMETZINCIN aerophilum (strain ATCC 51768

Query: 4 GYYPNL 9
GYYP L
Sbjct: 68 GYYPGL 73


>sp|CDPAS_PYRAE|CDP-ARCHAEOL synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 FGYYPNL 9
GY+PNL
Sbjct: 64 LGYFPNL 70


>sp|CDPAS_PYRCJ|CDP-ARCHAEOL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 FGYYPNLA 10
GY PNLA
Sbjct: 65 LGYAPNLA 72


>sp|ARGC_METMA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 YYPNLA 10
+YPNLA
Sbjct: 189 HYPNLA 194


>sp|BSUHB_ARCFU|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE fulgidus (strain ATCC 49558

Query: 1 AQFGYYPNLA 10
A FGY NLA
Sbjct: 112 AFFGYVYNLA 121


>sp|TRPE2_HALSA|ANTHRANILATE synthase component 1 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 QFGYYPNLA 10
Q G YP +A
Sbjct: 135 QLGVYPTIA 143


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AQFGYYPN 8
AQF YYP+
Sbjct: 726 AQFIYYPD 733


>sp|Y1567_ARCFU|UNCHARACTERIZED protein AF_1567|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FGYYPN 8
F YYPN
Sbjct: 129 FEYYPN 134


>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 4 GYYPNLA 10
GYY N+A
Sbjct: 185 GYYGNIA 191




49|SequenceR|250|241|LAISFAQFGY

>sp|RAD50_METTH|DNA double-strand break repair Rad50|Methanothermobacter

Query: 1 LAISFAQFG 9
LA+ FA FG
Sbjct: 41 LAVEFALFG 49




50|SequenceR|255|246|HDALWLAISF

>sp|THI4_HALSA|THIAMINE thiazole synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 HDALWLAIS 9
HD++W+A S
Sbjct: 229 HDSMWVADS 237


>sp|THI4_HALS3|THIAMINE thiazole synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 HDALWLAIS 9
HD++W+A S
Sbjct: 229 HDSMWVADS 237


>sp|SYFA_AERPE|PHENYLALANINE--TRNA ligase alpha subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 HDALWL 6
HD+LW+
Sbjct: 282 HDSLWI 287


>sp|THI4_HALWD|THIAMINE thiazole synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HDALWLAIS 9
HD++W++ S
Sbjct: 229 HDSMWVSRS 237


>sp|THI4_HALVD|THIAMINE thiazole synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 HDALWLAIS 9
HD++W++ S
Sbjct: 229 HDSMWVSES 237


>sp|THI4_NATPD|THIAMINE thiazole synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HDALWLAIS 9
HD++W+ S
Sbjct: 230 HDSMWVGQS 238


>sp|THI4_HALMA|THIAMINE thiazole synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HDALWLAIS 9
HD++W+ S
Sbjct: 230 HDSMWVGES 238


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 HDALWL 6
+DALWL
Sbjct: 386 NDALWL 391


>sp|KVAP_AERPE|VOLTAGE-GATED potassium channel|Aeropyrum pernix (strain ATCC 700893

Query: 2 DALWLAI 8
DALW A+
Sbjct: 198 DALWWAV 204




51|SequenceR|260|251|AYWYYHDALW

>sp|Y399_ARCFU|UNCHARACTERIZED protein AF_0399|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WYYHDAL 9
WYYH L
Sbjct: 161 WYYHATL 167


>sp|TRM56_SACS2|TRNA (cytidine(56)-2'-O)-methyltransferase|Saccharolobus solfataricus

Query: 3 WYYHDA 8
WYYH+A
Sbjct: 101 WYYHNA 106


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YWYYHDALW 10
YW++ DA+W
Sbjct: 767 YWHFVDAVW 775


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 YYHDALW 10
YYH +W
Sbjct: 264 YYHPVIW 270


>sp|Y1001_ARCFU|UNCHARACTERIZED protein AF_1001|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YWYYHD 7
+WYY D
Sbjct: 75 FWYYFD 80


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AYWYYHDALW 10
A W DALW
Sbjct: 24 AEWLTIDALW 33


>sp|PURL_METS5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Metallosphaera sedula (strain ATCC 51363

Query: 1 AYWYYHDALW 10
A W DALW
Sbjct: 24 AEWKLVDALW 33


>sp|TRM56_METS5|TRNA (cytidine(56)-2'-O)-methyltransferase|Metallosphaera sedula (strain

Query: 3 WYYHDA 8
WYYH A
Sbjct: 112 WYYHMA 117


>sp|GLYAR_HALSA|GLYCOLALDEHYDE reductase|Halobacterium salinarum (strain ATCC 700922

Query: 2 YWYY 5
YWYY
Sbjct: 140 YWYY 143


>sp|MIG_METTF|THYMINE/URACIL-DNA glycosylase|Methanothermobacter thermautotrophicus

Query: 4 YYHDALW 10
Y H ALW
Sbjct: 164 YNHKALW 170


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YWYYHDALW 10
YW D +W
Sbjct: 852 YWMASDIMW 860


>sp|SYFA_AERPE|PHENYLALANINE--TRNA ligase alpha subunit|Aeropyrum pernix (strain ATCC 700893

Query: 6 HDALW 10
HD+LW
Sbjct: 282 HDSLW 286


>sp|AGOG_METMP|N-GLYCOSYLASE/DNA lyase|Methanococcus maripaludis (strain DSM 14266

Query: 2 YWYYHDA 8
YW HDA
Sbjct: 77 YWSKHDA 83


>sp|Y600_METMP|PROBABLE minor pilin MMP0600|Methanococcus maripaludis (strain DSM 14266

Query: 3 WYYHDA 8
WYY D
Sbjct: 95 WYYSDG 100


>sp|Y2248_HALVD|UNCHARACTERIZED motility-related protein HVO_2248|Haloferax volcanii (strain ATCC

Query: 4 YYHDALW 10
YY + LW
Sbjct: 107 YYFEGLW 113


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 3 WYYHDALW 10
+YY++ +W
Sbjct: 1014 FYYNNTIW 1021


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 4 YYHDALW 10
YYH LW
Sbjct: 466 YYHGLLW 472




52|SequenceR|265|256|LFICLAYWYY

>sp|UPPS_SACS2|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Saccharolobus

Query: 1 LFICLAYW 8
LF C AYW
Sbjct: 231 LFFCEAYW 238


>sp|GLNA_METTH|GLUTAMINE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 FICLAYW 8
FIC YW
Sbjct: 94 FICDIYW 100


>sp|UPPS_HALSA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Halobacterium

Query: 1 LFICLAYW 8
+F C YW
Sbjct: 225 VFFCTPYW 232


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 CLAYW 8
CL YW
Sbjct: 275 CLGYW 279


>sp|UPPS_HALMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Haloarcula

Query: 2 FICLAYW 8
F C YW
Sbjct: 226 FFCTPYW 232


>sp|RECJ1_METJA|EXONUCLEASE RecJ1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LFICLAYW 8
LF+ + YW
Sbjct: 207 LFVSMRYW 214


>sp|VOLA_HALVD|VOLACTIN volcanii (strain ATCC 29605

Query: 3 ICLAYW 8
ICLAY+
Sbjct: 180 ICLAYY 185


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 5 LAYWY 9
L+YWY
Sbjct: 109 LSYWY 113


>sp|Y971_METJA|UNCHARACTERIZED protein MJ0971|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LFICLAYWYY 10
LFI YW Y
Sbjct: 282 LFINTIYWTY 291


>sp|Y437_METJA|UNCHARACTERIZED protein MJ0437|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ICLAYWYY 10
+C+AY YY
Sbjct: 37 LCMAYLYY 44


>sp|YC8A_METJA|UNCHARACTERIZED protein MJ1282.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LFICLAYWYY 10
+FICL+Y Y
Sbjct: 225 VFICLSYILY 234




53|SequenceR|270|261|SISSILFICL

***** No hits found ******


54|SequenceR|275|266|LSLCISISSI

***** No hits found ******


55|SequenceR|280|271|KRTKYLSLCI

>sp|AROC_SULTO|CHORISMATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 KYLSLC 9
KY+SLC
Sbjct: 378 KYISLC 383




56|SequenceR|285|276|LTQSQKRTKY

>sp|ARFB_META3|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus aeolicus (strain ATCC

Query: 1 LTQSQKRTKY 10
LT+++K KY
Sbjct: 191 LTEARKNNKY 200




57|SequenceR|290|281|KVMDRLTQSQ

>sp|LYSZ_SACI7|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KVMDRLTQSQ 10
KV+DRLT +
Sbjct: 200 KVVDRLTPEE 209


>sp|LYSZ_SACI6|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KVMDRLTQSQ 10
KV+DRLT +
Sbjct: 200 KVVDRLTPEE 209


>sp|LYSZ_SACI4|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KVMDRLTQSQ 10
KV+DRLT +
Sbjct: 200 KVVDRLTPEE 209


>sp|LYSZ_SACI3|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KVMDRLTQSQ 10
KV+DRLT +
Sbjct: 200 KVVDRLTPEE 209


>sp|LYSZ_SACI2|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KVMDRLTQSQ 10
KV+DRLT +
Sbjct: 200 KVVDRLTPEE 209


>sp|LYSZ_SACI1|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KVMDRLTQSQ 10
KV+DRLT +
Sbjct: 200 KVVDRLTPEE 209




58|SequenceR|295|286|VRMSLKVMDR

>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 VRMSLKVMDR 10
+R SLK++DR
Sbjct: 1112 IRPSLKLVDR 1121




59|SequenceR|300|291|PRCVCVRMSL

>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PRCVCVRMS 9
P+C+C R S
Sbjct: 421 PKCICYRNS 429


>sp|DPO4_NITMS|DNA polymerase IV|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PRCVCV 6
P CVCV
Sbjct: 30 PVCVCV 35


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 1 PRCVCVRMSL 10
P C CV SL
Sbjct: 291 PLCFCVECSL 300




60|SequenceR|305|296|EEEGGPRCVC

>sp|Y823_METJA|UNCHARACTERIZED ATP-binding protein MJ0823|Methanocaldococcus jannaschii (strain

Query: 2 EEGGPRCVC 10
EEGG CVC
Sbjct: 106 EEGGEGCVC 114


>sp|Y36K_HALSN|UNCHARACTERIZED 36 kDa protein|Halobacterium sp. (strain GN101)

Query: 1 EEEGGPRCVC 10
EE+GGPR +
Sbjct: 108 EEDGGPRPLV 117


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 EEGGPRCV 9
EE G RCV
Sbjct: 133 EEAGLRCV 140


>sp|NK_THEAC|NUCLEOSIDE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EEEGGPRC 8
E+E GP C
Sbjct: 86 EDESGPIC 93


>sp|Y1325_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1325|Methanocaldococcus

Query: 3 EGGPRCVC 10
E G CVC
Sbjct: 28 ENGSMCVC 35


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 4 GGPRC 8
GGPRC
Sbjct: 49 GGPRC 53


>sp|TRM1_ARCFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Archaeoglobus fulgidus

Query: 3 EGGPRCVC 10
EG RC C
Sbjct: 234 EGAERCEC 241


>sp|SELB_METJA|SELENOCYSTEINE-SPECIFIC elongation factor|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEEGGPRCVC 10
E +GG C C
Sbjct: 335 EIKGGDSCYC 344


>sp|RRP41_METTH|EXOSOME complex component Rrp41|Methanothermobacter thermautotrophicus

Query: 1 EEEGGPRC 8
E EGG RC
Sbjct: 131 EAEGGTRC 138


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 2 EEGGPR 7
+EGGPR
Sbjct: 435 QEGGPR 440




61|SequenceR|310|301|SSDVWEEEGG

>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SSDVWEEEG 9
S+D+WEE G
Sbjct: 377 STDIWEERG 385


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 3 DVWEEEG 9
DVWEE G
Sbjct: 37 DVWEENG 43


>sp|SYFB_PYRHO|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DVWEEEG 9
DVWEE G
Sbjct: 37 DVWEENG 43


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DVWEEEG 9
DVWEE+G
Sbjct: 37 DVWEEDG 43


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 3 DVWEEEG 9
DVWEE G
Sbjct: 37 DVWEENG 43


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 VWEEEG 9
+WEEEG
Sbjct: 18 IWEEEG 23


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 DVWEEEG 9
DVWEE G
Sbjct: 37 DVWEENG 43


>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 3 DVWEEEG 9
D+WE EG
Sbjct: 37 DIWEHEG 43


>sp|Y065_METJA|UNCHARACTERIZED protein MJ0065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DVWEEEG 9
+VWE+EG
Sbjct: 151 EVWEKEG 157


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 VWEEEGG 10
+WEEE G
Sbjct: 246 IWEEEEG 252


>sp|SYFB_PYRAB|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 DVWEEEG 9
DVWEE G
Sbjct: 37 DVWEENG 43


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 SDVWEEEGG 10
SD+W +E G
Sbjct: 35 SDIWYDETG 43


>sp|GATD_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrobaculum aerophilum (strain ATCC

Query: 2 SDVWEEEGG 10
+DV++E GG
Sbjct: 267 TDVYKERGG 275


>sp|Y1237_ARCFU|UNCHARACTERIZED protein AF_1237|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SDVWEEEG 9
S VWEE+G
Sbjct: 41 SKVWEEKG 48


>sp|WECC_META3|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DVWEEEG 9
++WEE+G
Sbjct: 415 NLWEEQG 421


>sp|GYRA_HALL2|DNA gyrase subunit A|Haloferax lucentense (strain DSM 14919

Query: 3 DVWEEEG 9
DV+EEEG
Sbjct: 258 DVFEEEG 264


>sp|TRM56_METAC|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina acetivorans

Query: 5 WEEEGG 10
W+EEGG
Sbjct: 74 WKEEGG 79


>sp|Y515_METJA|UNCHARACTERIZED protein MJ0515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VWEEEG 9
VW EEG
Sbjct: 244 VWREEG 249


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 2 SDVWEEE 8
SD WE+E
Sbjct: 538 SDSWEKE 544


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WEEEGG 10
W+E GG
Sbjct: 185 WDENGG 190


>sp|PUR8_PYRAB|ADENYLOSUCCINATE lyase|Pyrococcus abyssi (strain GE5 /

Query: 4 VWEEE 8
VWEEE
Sbjct: 18 VWEEE 22


>sp|LYSK_PYRAE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrobaculum aerophilum

Query: 3 DVWEEEGG 10
DVW +E G
Sbjct: 37 DVWIDEAG 44


>sp|PUR8_METJA|ADENYLOSUCCINATE lyase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VWEEE 8
VWEEE
Sbjct: 30 VWEEE 34


>sp|RFRNP_METTP|RNA-FREE ribonuclease P|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 SDVWEEEG 9
S WE EG
Sbjct: 16 SQAWESEG 23


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DVWEEEG 9
++WE+EG
Sbjct: 409 ELWEKEG 415


>sp|XACG_HALVD|XYLOSE/ARABINOSE-BINDING protein XacG|Haloferax volcanii (strain ATCC 29605

Query: 2 SDVWEEEG 9
+DVW+ EG
Sbjct: 153 ADVWDAEG 160




62|SequenceR|315|306|GPVLESSDVW

>sp|Y2394_METBU|MEMO1 family protein Mbur_2394|Methanococcoides burtonii (strain DSM

Query: 2 PVLESSDVW 10
PV S DVW
Sbjct: 79 PVAMSQDVW 87


>sp|PSTB1_HALMA|PHOSPHATE import ATP-binding protein PstB|Haloarcula marismortui (strain

Query: 2 PVLESSDV 9
PV+ESSD+
Sbjct: 52 PVIESSDL 59


>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 1 GPVLESSDVW 10
GP++++ +W
Sbjct: 43 GPIVDAGSLW 52


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 GPVLESSDVW 10
GP E SD W
Sbjct: 369 GPFAEDSDSW 378


>sp|PC2DH_METBF|PRECORRIN-2 dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VLESSDVW 10
VLES VW
Sbjct: 190 VLESETVW 197


>sp|DNAG_METJA|DNA primase DnaG|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPVLESSD 8
GP ++SSD
Sbjct: 164 GPAVDSSD 171


>sp|AATB_HALSA|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC

Query: 1 GPVLESSD 8
G VLESSD
Sbjct: 41 GQVLESSD 48


>sp|AATB_HALS3|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 29341

Query: 1 GPVLESSD 8
G VLESSD
Sbjct: 41 GQVLESSD 48


>sp|PYRB_PICTO|ASPARTATE carbamoyltransferase catalytic subunit|Picrophilus torridus (strain

Query: 3 VLESSDVW 10
V+ESSDV+
Sbjct: 215 VIESSDVF 222


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GPVLES 6
GPVLES
Sbjct: 154 GPVLES 159


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 3 VLESSDVW 10
VLE +D W
Sbjct: 424 VLEGADCW 431


>sp|SAT_IGNH4|SULFATE adenylyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GPVLESSDV 9
GP+++ SDV
Sbjct: 153 GPLIQISDV 161




63|SequenceR|320|311|LVLCDGPVLE

>sp|SQRD_ACIAM|SULFIDE-QUINONE reductase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 4 CDGPVLE 10
C+GPV E
Sbjct: 178 CEGPVFE 184


>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 3 LCDGPV 8
LCDGPV
Sbjct: 42 LCDGPV 47


>sp|Y133_METJA|UNCHARACTERIZED protein MJ0133|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VLCDGPVLE 10
V+C+ P+LE
Sbjct: 252 VICESPMLE 260


>sp|GPGS_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LVLCDGP 7
+V CDGP
Sbjct: 94 VVWCDGP 100


>sp|AHBC_METBF|FE-COPROPORPHYRIN III synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 CDGPVL 9
CDGP L
Sbjct: 263 CDGPYL 268


>sp|KAD6_SACS2|PUTATIVE adenylate kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 CDGPV 8
CDGP+
Sbjct: 157 CDGPI 161


>sp|KAD6_SACI7|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 CDGPV 8
CDGP+
Sbjct: 157 CDGPI 161


>sp|KAD6_SACI6|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 CDGPV 8
CDGP+
Sbjct: 157 CDGPI 161


>sp|KAD6_SACI4|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 CDGPV 8
CDGP+
Sbjct: 157 CDGPI 161


>sp|KAD6_SACI3|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain M.16.27)

Query: 4 CDGPV 8
CDGP+
Sbjct: 157 CDGPI 161


>sp|KAD6_SACI2|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 CDGPV 8
CDGP+
Sbjct: 157 CDGPI 161


>sp|KAD6_SACI1|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 CDGPV 8
CDGP+
Sbjct: 157 CDGPI 161


>sp|NTPPA_METBU|DTTP/UTP pyrophosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LVLCDGPVL 9
+V CDG +L
Sbjct: 72 VVFCDGAIL 80


>sp|DADD_METST|5'-DEOXYADENOSINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 VLCDGPVL 9
V+CDG +L
Sbjct: 393 VICDGQLL 400


>sp|CARA_PYRFU|CARBAMOYL phosphate synthase small chain|Pyrococcus furiosus (strain ATCC

Query: 1 LVLCDGPVLE 10
LVL DG V+E
Sbjct: 9 LVLEDGSVIE 18


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 LVLCDGPV 8
LVLC+G V
Sbjct: 250 LVLCEGLV 257


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 LVLCDGPV 8
LVLC+G V
Sbjct: 245 LVLCEGLV 252


>sp|PSTB2_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain ATCC

Query: 1 LVLCDGPVLE 10
+VL DG V+E
Sbjct: 249 VVLLDGQVIE 258


>sp|MTAD_HALSA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LCDGPVL 9
+CDG VL
Sbjct: 394 ICDGEVL 400




64|SequenceR|325|316|GGEQPLVLCD

>sp|CS3HD_PYRFU|CRISPR-ASSOCIATED endonuclease Cas3-HD|Pyrococcus furiosus (strain ATCC 43587

Query: 5 PLVLCD 10
PLVLCD
Sbjct: 208 PLVLCD 213


>sp|CS3HD_METJA|CRISPR-ASSOCIATED endonuclease Cas3-HD|Methanocaldococcus jannaschii (strain ATCC

Query: 5 PLVLCD 10
PLV+CD
Sbjct: 214 PLVMCD 219


>sp|HEM1_METAR|GLUTAMYL-TRNA reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GEQPLVLCD 10
GE+PL+ D
Sbjct: 257 GEKPLIFID 265


>sp|DPHB_METTH|DIPHTHINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GGEQPLVLCD 10
G E+PLV D
Sbjct: 208 GSEKPLVRAD 217


>sp|Y1557_ARCFU|UNCHARACTERIZED protein AF_1557|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GEQPLVLCD 10
GE L++CD
Sbjct: 159 GEDGLIVCD 167


>sp|Y632_METJA|UNCHARACTERIZED ATP-binding protein MJ0632|Methanocaldococcus jannaschii (strain

Query: 2 GEQPLVLCD 10
G+QP+++ D
Sbjct: 150 GKQPIIIID 158


>sp|Y439_METJA|UNCHARACTERIZED ATP-binding protein MJ0439|Methanocaldococcus jannaschii (strain

Query: 2 GEQPLVLCD 10
G+QP+++ D
Sbjct: 147 GKQPIIIID 155


>sp|Y1301_METJA|UNCHARACTERIZED ATP-binding protein MJ1301|Methanocaldococcus jannaschii (strain

Query: 2 GEQPLVLCD 10
G+QP+++ D
Sbjct: 142 GKQPIIIID 150


>sp|Y1010_METJA|UNCHARACTERIZED ATP-binding protein MJ1010|Methanocaldococcus jannaschii (strain

Query: 2 GEQPLVLCD 10
G+QP+++ D
Sbjct: 153 GKQPIIIID 161


>sp|UPPP_KORCO|UNDECAPRENYL-DIPHOSPHATASE cryptofilum (strain OPF8)

Query: 1 GGEQPLVL 8
GGE+PL L
Sbjct: 139 GGERPLDL 146


>sp|TOP6B_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 2 GEQPLVL 8
GE+P+VL
Sbjct: 365 GEEPIVL 371


>sp|TOP6B_SACS2|TYPE 2 DNA topoisomerase 6|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GEQPLVL 8
GE+P+VL
Sbjct: 365 GEEPIVL 371


>sp|TOP6B_SACI7|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 GEQPLVL 8
GE+P+VL
Sbjct: 365 GEEPIVL 371


>sp|TOP6B_SACI6|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GEQPLVL 8
GE+P+VL
Sbjct: 365 GEEPIVL 371


>sp|TOP6B_SACI4|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GEQPLVL 8
GE+P+VL
Sbjct: 365 GEEPIVL 371


>sp|TOP6B_SACI3|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.27)

Query: 2 GEQPLVL 8
GE+P+VL
Sbjct: 365 GEEPIVL 371


>sp|TOP6B_SACI2|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GEQPLVL 8
GE+P+VL
Sbjct: 365 GEEPIVL 371


>sp|TOP6B_SACI1|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 GEQPLVL 8
GE+P+VL
Sbjct: 365 GEEPIVL 371


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GEQPLVL 8
G QPLVL
Sbjct: 31 GRQPLVL 37


>sp|ARGD_METMA|ACETYLORNITHINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GEQPLVL 8
G QPLVL
Sbjct: 31 GRQPLVL 37


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 3 EQPLVLC 9
E+P+VLC
Sbjct: 241 EKPVVLC 247




65|SequenceR|330|321|DCPMLGGEQP

>sp|THIL_METJA|THIAMINE-MONOPHOSPHATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DCPMLGGE 8
DCP++GG+
Sbjct: 115 DCPVVGGD 122


>sp|SRP54_PYRIL|SIGNAL recognition particle 54 kDa|Pyrobaculum islandicum (strain DSM

Query: 4 MLGGEQP 10
+LGGEQP
Sbjct: 84 LLGGEQP 90


>sp|SRP54_PYRCJ|SIGNAL recognition particle 54 kDa|Pyrobaculum calidifontis (strain DSM

Query: 4 MLGGEQP 10
+LGGEQP
Sbjct: 83 LLGGEQP 89


>sp|SRP54_PYRAE|SIGNAL recognition particle 54 kDa|Pyrobaculum aerophilum (strain ATCC

Query: 4 MLGGEQP 10
+LGGEQP
Sbjct: 84 LLGGEQP 90


>sp|SRP54_PYRNV|SIGNAL recognition particle 54 kDa|Pyrobaculum neutrophilum (strain DSM

Query: 4 MLGGEQP 10
+LGGEQP
Sbjct: 84 LLGGEQP 90


>sp|BACS_HALSD|SENSORY rhodopsin|Halorubrum sodomense

Query: 1 DCPMLGGEQP 10
D P +GGE P
Sbjct: 233 DGPAVGGEAP 242


>sp|Y1027_METJA|UNCHARACTERIZED protein MJ1027|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPMLGGEQP 10
CP++GG +P
Sbjct: 154 CPIIGGIRP 162


>sp|SRP54_PYRAR|SIGNAL recognition particle 54 kDa|Pyrobaculum arsenaticum (strain DSM

Query: 4 MLGGEQP 10
++GGEQP
Sbjct: 84 LMGGEQP 90


>sp|RAD50_AERPE|DNA double-strand break repair Rad50|Aeropyrum pernix (strain ATCC

Query: 2 CPMLGGEQP 10
CP+ G E P
Sbjct: 464 CPVCGAELP 472


>sp|Y530_METJA|UNCHARACTERIZED ZPR1-like protein MJ0530|Methanocaldococcus jannaschii (strain

Query: 1 DCPMLGGE 8
DCP+ GG+
Sbjct: 8 DCPVCGGK 15


>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 2 CPMLGGE 8
CP+ GGE
Sbjct: 261 CPVCGGE 267


>sp|TRM1_HALSA|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 1 DCPMLGGEQ 9
+CP GG Q
Sbjct: 257 ECPRCGGHQ 265


>sp|TRM1_HALS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 1 DCPMLGGEQ 9
+CP GG Q
Sbjct: 257 ECPRCGGHQ 265


>sp|Y1223_PYRHO|UNCHARACTERIZED ZPR1-like protein PH1223|Pyrococcus horikoshii (strain ATCC

Query: 1 DCPMLGGE 8
DCP+ GG+
Sbjct: 32 DCPICGGK 39


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 DCPMLGGE 8
+CP GGE
Sbjct: 871 ECPNCGGE 878


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 1 DCPMLGGEQP 10
D P + GE P
Sbjct: 503 DAPFISGETP 512


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PMLGGEQP 10
PM GG+ P
Sbjct: 525 PMFGGKVP 532


>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 2 CPMLGGEQP 10
CP GG P
Sbjct: 499 CPTYGGRCP 507


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPMLGGE 8
CP GGE
Sbjct: 142 CPYCGGE 148


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 CPMLGGE 8
CP GGE
Sbjct: 128 CPKCGGE 134


>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CPMLGGE 8
CP GGE
Sbjct: 128 CPKCGGE 134


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 CPMLGGE 8
CP GGE
Sbjct: 128 CPKCGGE 134


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 CPMLGGE 8
CP GGE
Sbjct: 128 CPKCGGE 134


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 CPMLGGE 8
CP GGE
Sbjct: 128 CPKCGGE 134


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPMLGGE 8
CP GGE
Sbjct: 130 CPKCGGE 136


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 1 DCPMLGGEQP 10
D P + GE P
Sbjct: 488 DAPFVNGETP 497


>sp|TF2B_METB6|TRANSCRIPTION initiation factor IIB|Methanoregula boonei (strain DSM 21154

Query: 2 CPMLGGEQ 9
CP GG Q
Sbjct: 38 CPECGGRQ 45


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CPMLGGE 8
CP GGE
Sbjct: 583 CPECGGE 589


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 CPMLGGE 8
CP GGE
Sbjct: 131 CPECGGE 137


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CPMLGGE 8
CP GGE
Sbjct: 129 CPECGGE 135


>sp|SYG_PYRAB|GLYCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 CPMLGGE 8
CP GGE
Sbjct: 131 CPECGGE 137


>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 CPMLGGE 8
CP GGE
Sbjct: 131 CPECGGE 137


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 CPMLGGE 8
CP GGE
Sbjct: 131 CPECGGE 137


>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 CPMLGGE 8
CP GGE
Sbjct: 131 CPECGGE 137


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 CPMLGGE 8
CP GGE
Sbjct: 127 CPECGGE 133


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CPMLGGE 8
CP+ GG+
Sbjct: 10 CPVCGGD 16


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 2 CPMLGGE 8
CP GGE
Sbjct: 265 CPECGGE 271




66|SequenceR|335|326|AVLAADCPML

>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 VLAADCPML 10
V +DCPML
Sbjct: 395 VKESDCPML 403


>sp|RPO4_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo4|Saccharolobus shibatae (strain ATCC

Query: 1 AVLAADCPM 9
AVLA+ CP+
Sbjct: 70 AVLASICPI 78


>sp|RPO4_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo4|Sulfolobus acidocaldarius (strain

Query: 1 AVLAADCP 8
AVLA+ CP
Sbjct: 71 AVLASICP 78


>sp|RSMA_HALWD|PROBABLE ribosomal RNA small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VLAADCPML 10
+L ADCP++
Sbjct: 149 LLPADCPLI 157


>sp|RL30E_METMA|LARGE ribosomal subunit protein eL30|Methanosarcina mazei (strain ATCC

Query: 2 VLAADCP 8
VLA++CP
Sbjct: 45 VLASNCP 51


>sp|RL30E_METAC|LARGE ribosomal subunit protein eL30|Methanosarcina acetivorans (strain

Query: 2 VLAADCP 8
VLA++CP
Sbjct: 41 VLASNCP 47




67|SequenceR|340|331|VMCEGAVLAA

>sp|CAS1C_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 MCEGAVLAA 10
+CE AVLAA
Sbjct: 192 ICEAAVLAA 200


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 CEGAVLA 9
CEG VLA
Sbjct: 402 CEGIVLA 408


>sp|SAHH_HALWD|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16790

Query: 1 VMCEGAVLA 9
VM +GA+LA
Sbjct: 295 VMSDGAILA 303


>sp|SAHH_HALWC|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16854

Query: 1 VMCEGAVLA 9
VM +GA+LA
Sbjct: 295 VMSDGAILA 303


>sp|TRUB_PYRIL|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum islandicum (strain DSM

Query: 2 MCEGAVLAA 10
+C GA LAA
Sbjct: 251 LCNGAPLAA 259


>sp|TRUB_PYRCJ|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum calidifontis (strain DSM

Query: 2 MCEGAVLAA 10
+C GA LAA
Sbjct: 251 LCNGAPLAA 259


>sp|TRUB_PYRAE|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum aerophilum (strain ATCC

Query: 2 MCEGAVLAA 10
+C GA LAA
Sbjct: 251 ICNGAPLAA 259


>sp|TRUB_PYRNV|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum neutrophilum (strain DSM

Query: 2 MCEGAVLAA 10
+C GA LAA
Sbjct: 251 LCNGAPLAA 259


>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VMCEGAVLA 9
VM +GAVLA
Sbjct: 279 VMPDGAVLA 287


>sp|TRUB_PYRAR|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum arsenaticum (strain DSM

Query: 2 MCEGAVLAA 10
+C GA LAA
Sbjct: 251 VCHGAPLAA 259


>sp|NTPPA_METBU|DTTP/UTP pyrophosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VMCEGAVLA 9
V C+GA+L
Sbjct: 73 VFCDGAILG 81




68|SequenceR|345|336|LSSENVMCEG

***** No hits found ******


69|SequenceR|350|341|ISEGTLSSEN

>sp|PUR2_METB6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoregula boonei (strain DSM 21154

Query: 1 ISEGTLSSEN 10
I+EGTLS+ N
Sbjct: 311 ITEGTLSASN 320


>sp|Y2344_ARCFU|UNCHARACTERIZED protein AF_2344|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SEGTLSSEN 10
SEG L +EN
Sbjct: 17 SEGVLKTEN 25




70|SequenceR|355|346|TKLVPISEGT

>sp|FLPA_PYRAE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum aerophilum (strain

Query: 2 KLVPISEGT 10
KLVPI EGT
Sbjct: 72 KLVPIKEGT 80


>sp|FLPA_PYRCJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum calidifontis (strain

Query: 2 KLVPISEGT 10
KLVPI EGT
Sbjct: 72 KLVPIREGT 80


>sp|FLPA_PYRAR|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum arsenaticum (strain

Query: 2 KLVPISEGT 10
KLVPI EGT
Sbjct: 72 KLVPIREGT 80


>sp|FLPA_PYRNV|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum neutrophilum (strain

Query: 2 KLVPISEGT 10
K VPI EGT
Sbjct: 72 KFVPIQEGT 80


>sp|FLPA_PYRIL|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum islandicum (strain

Query: 2 KLVPISEGT 10
K +PI EGT
Sbjct: 72 KFIPIQEGT 80


>sp|Y655_ARCFU|METALLOPROTEASE AF_0655|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KLVPISEGT 10
+LVP+S+G+
Sbjct: 405 QLVPVSDGS 413


>sp|AATC_METBU|A-TYPE ATP synthase subunit C|Methanococcoides burtonii (strain DSM 6242

Query: 1 TKLVPISEG 9
TKL+ ISEG
Sbjct: 92 TKLINISEG 100


>sp|PUR7_METBF|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TKLVPISEGT 10
TK PI EGT
Sbjct: 101 TKRYPIKEGT 110


>sp|MSRA_METAC|PEPTIDE methionine sulfoxide reductase MsrA|Methanosarcina acetivorans

Query: 1 TKLVPISE 8
T++VP+SE
Sbjct: 154 TEIVPVSE 161


>sp|MSRA_METMA|PEPTIDE methionine sulfoxide reductase MsrA|Methanosarcina mazei (strain

Query: 1 TKLVPISE 8
T++VP+SE
Sbjct: 177 TEIVPVSE 184


>sp|PUR7_METMA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TKLVPISEGT 10
T+ PI EGT
Sbjct: 101 TRKYPIKEGT 110


>sp|FKBPL_METJA|LONG-TYPE peptidyl-prolyl cis-trans isomerase|Methanocaldococcus jannaschii

Query: 2 KLVPISEGT 10
KL+P+SE T
Sbjct: 89 KLIPLSEFT 97


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 KLVPISEG 9
KLVPI +G
Sbjct: 51 KLVPIGKG 58


>sp|THIC1_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KLVPISEG 9
KLVPI +G
Sbjct: 51 KLVPIGKG 58


>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 KLVPISEG 9
KLVPI +G
Sbjct: 51 KLVPIGKG 58


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 KLVPISEG 9
KLVPI +G
Sbjct: 51 KLVPIGKG 58


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KLVPISEG 9
KLVPI +G
Sbjct: 51 KLVPIGKG 58


>sp|THIC_SULAC|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KLVPISEG 9
KLVPI +G
Sbjct: 51 KLVPIGKG 58


>sp|KAE1_SULTO|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfurisphaera tokodaii

Query: 2 KLVPISEG 9
KLVP++ G
Sbjct: 105 KLVPVNHG 112


>sp|KAE1_SACS2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 2 KLVPISEG 9
KLVP++ G
Sbjct: 103 KLVPVNHG 110


>sp|KAE1_SACI7|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 KLVPISEG 9
KLVP++ G
Sbjct: 103 KLVPVNHG 110


>sp|KAE1_SACI2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 KLVPISEG 9
KLVP++ G
Sbjct: 103 KLVPVNHG 110


>sp|KAE1_SACI6|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 KLVPISEG 9
KLVP++ G
Sbjct: 103 KLVPVNHG 110


>sp|KAE1_SACI4|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 KLVPISEG 9
KLVP++ G
Sbjct: 103 KLVPVNHG 110


>sp|KAE1_SACI3|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 KLVPISEG 9
KLVP++ G
Sbjct: 103 KLVPVNHG 110




71|SequenceR|360|351|GEPLATKLVP

>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GEPLATKLVP 10
G P TKLVP
Sbjct: 547 GSPNPTKLVP 556


>sp|NFI_NANEQ|BIFUNCTIONAL methyltransferase-like/endonuclease|Nanoarchaeum equitans (strain

Query: 1 GEPLATKLV 9
G+P+ATK V
Sbjct: 46 GDPIATKFV 54


>sp|COXX_HALWD|PROTOHEME IX farnesyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 EPLATKLVP 10
PLAT LVP
Sbjct: 269 RPLATDLVP 277


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GEPLATKLVP 10
GEPL L+P
Sbjct: 89 GEPLGLYLLP 98


>sp|Y397_ARCFU|UNCHARACTERIZED protein AF_0397|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EPLATKLV 9
EPLAT++V
Sbjct: 39 EPLATQMV 46


>sp|IF2P_METBU|PROBABLE translation initiation factor IF-2|Methanococcoides burtonii

Query: 1 GEPLATKL 8
GEP+ TK+
Sbjct: 272 GEPIQTKV 279




72|SequenceR|365|356|CYPGLGEPLA

>sp|AROC_CALMQ|CHORISMATE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 PGLGEPL 9
PGLGEP+
Sbjct: 220 PGLGEPV 226


>sp|AROC_KORCO|CHORISMATE synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 PGLGEPL 9
PGLGEP+
Sbjct: 220 PGLGEPI 226


>sp|AROC_METTP|CHORISMATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PGLGEPL 9
PGLGEP+
Sbjct: 231 PGLGEPV 237


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PGLGEP 8
PGLGEP
Sbjct: 218 PGLGEP 223


>sp|AROC_METBU|CHORISMATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PGLGEPL 9
PG+GEP+
Sbjct: 219 PGIGEPV 225


>sp|RLMN_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 2 YPGLGEPLA 10
+ G+GEP+A
Sbjct: 165 FMGMGEPMA 173


>sp|AROC_PYRIL|CHORISMATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PGLGEP 8
PGLGEP
Sbjct: 218 PGLGEP 223


>sp|AROC_PYRCJ|CHORISMATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 PGLGEP 8
PGLGEP
Sbjct: 218 PGLGEP 223


>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 PGLGEP 8
PGLGEP
Sbjct: 218 PGLGEP 223


>sp|IF2B_METLZ|TRANSLATION initiation factor 2 subunit|Methanocorpusculum labreanum (strain

Query: 2 YPGLGEP 8
Y G+GEP
Sbjct: 13 YSGIGEP 19


>sp|AROC_METTH|CHORISMATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PGLGEPL 9
PGLG+P+
Sbjct: 226 PGLGDPV 232


>sp|COBS_METAC|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YPGLGE 7
YPGLGE
Sbjct: 180 YPGLGE 185


>sp|AROC_THEVO|CHORISMATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PGLGEPL 9
PG+GEP
Sbjct: 215 PGVGEPF 221


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 PGLGEPLA 10
PG GE LA
Sbjct: 682 PGFGEKLA 689


>sp|COBS_METMA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CYPGLGE 7
YPGLGE
Sbjct: 179 TYPGLGE 185


>sp|GMS_METOI|GMGT synthase|Methanothermococcus okinawensis (strain DSM 14208

Query: 1 CYPGLGEPL 9
CY G+PL
Sbjct: 130 CYANAGKPL 138


>sp|CAPPA_METTH|PHOSPHOENOLPYRUVATE carboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 YPGLGEPL 9
YPGLG L
Sbjct: 408 YPGLGRDL 415


>sp|HTPX_HALSA|PROTEASE HtpX homolog|Halobacterium salinarum (strain ATCC 700922

Query: 4 GLGEPLA 10
G GEPLA
Sbjct: 209 GTGEPLA 215


>sp|MRE11_METKA|DNA double-strand break repair protein|Methanopyrus kandleri (strain

Query: 2 YPGLGEPL 9
YPG EPL
Sbjct: 215 YPGSPEPL 222


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 3 PGLGEPL 9
PGL EP+
Sbjct: 479 PGLSEPV 485


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 CYPGLGEP 8
C P LG P
Sbjct: 171 CVPALGPP 178


>sp|SYC_METS5|CYSTEINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 YPGLGE 7
YPG GE
Sbjct: 146 YPGYGE 151


>sp|Y270_METJA|UNCHARACTERIZED protein MJ0270|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YPGLGEPLA 10
Y GLG+ LA
Sbjct: 45 YDGLGQKLA 53


>sp|RL2_METS5|LARGE ribosomal subunit protein uL2|Metallosphaera sedula (strain ATCC

Query: 3 PGLGEPLA 10
PG+ EP+A
Sbjct: 48 PGMTEPVA 55


>sp|MPGP_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 2 YPGLGEPLA 10
Y LG+PLA
Sbjct: 98 YTALGKPLA 106


>sp|Y2166_ARCFU|UNCHARACTERIZED protein AF_2166|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YPGLGE 7
YPGLG+
Sbjct: 10 YPGLGD 15


>sp|Y1638_PYRFU|MEMO1 family protein PF1638|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YPGLGEPLA 10
+ GLG P+A
Sbjct: 78 HTGLGSPIA 86


>sp|AROC_METKA|CHORISMATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 PGLGEPL 9
PGLG+P+
Sbjct: 225 PGLGDPV 231


>sp|BACH_HALSD|HALORHODOPSIN sodomense

Query: 4 GLGEPLA 10
GLG PLA
Sbjct: 269 GLGAPLA 275


>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 2 YPGLGEPL 9
YPG+ +PL
Sbjct: 215 YPGVLDPL 222


>sp|Y539_PYRAB|MEMO1 family protein PYRAB05390|Pyrococcus abyssi (strain GE5 /

Query: 2 YPGLGEPLA 10
+ GLG P+A
Sbjct: 78 HTGLGSPIA 86


>sp|AATB_AERPE|A-TYPE ATP synthase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 4 GLGEPL 9
GLGEP+
Sbjct: 95 GLGEPI 100


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 2 YPGLG 6
YPGLG
Sbjct: 910 YPGLG 914


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 2 YPGLGEPLA 10
+ GLG P+A
Sbjct: 78 HTGLGSPIA 86


>sp|KAE1_HYPBU|TRNA N6-adenosine threonylcarbamoyltransferase|Hyperthermus butylicus

Query: 2 YPGLGEPL 9
Y GLG+P+
Sbjct: 149 YTGLGDPV 156


>sp|Y1626_PYRHO|MEMO1 family protein PH1626|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YPGLGEPLA 10
+ GLG P+A
Sbjct: 78 HTGLGSPIA 86


>sp|Y1726_THEGJ|MEMO1 family protein TGAM_1726|Thermococcus gammatolerans (strain DSM

Query: 2 YPGLGEPLA 10
+ GLG P+A
Sbjct: 78 HTGLGSPIA 86




73|SequenceR|370|361|RHTEACYPGL

>sp|THI4_METIK|THIAMINE thiazole synthase|Methanotorris igneus (strain DSM 5666

Query: 1 RHTEACYPGL 10
R+T YPGL
Sbjct: 212 RNTREVYPGL 221


>sp|SRP19_METTP|SIGNAL recognition particle 19 kDa|Methanothrix thermoacetophila (strain

Query: 3 TEACYP 8
TE CYP
Sbjct: 54 TEKCYP 59


>sp|THI4_METMJ|THIAMINE thiazole synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 HTEACYPGL 10
HT+ +PGL
Sbjct: 206 HTKEVFPGL 214


>sp|THIM_METMP|HYDROXYETHYLTHIAZOLE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 3 TEACYPG 9
TEA YPG
Sbjct: 231 TEAPYPG 237


>sp|ARLY_METBF|ARGININOSUCCINATE lyase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RHTEACYPGL 10
+HTE PG
Sbjct: 144 KHTETLMPGF 153


>sp|ARLY_METAC|ARGININOSUCCINATE lyase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RHTEACYPGL 10
+HTE PG
Sbjct: 144 KHTETLMPGF 153


>sp|THI4_THEKO|THIAMINE thiazole synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HTEACYPGL 10
HT +PGL
Sbjct: 203 HTREVFPGL 211


>sp|RL18_THESM|LARGE ribosomal subunit protein uL18|Thermococcus sibiricus (strain DSM

Query: 2 HTEACYPG 9
H+E YPG
Sbjct: 133 HSEEIYPG 140


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 2 HTEACYPGL 10
H E +PGL
Sbjct: 647 HGEVLFPGL 655


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 2 HTEACY 7
H E+CY
Sbjct: 446 HVESCY 451


>sp|PURT_METAR|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocella arvoryzae

Query: 2 HTEACYP 8
HTE YP
Sbjct: 349 HTEGWYP 355




74|SequenceR|375|366|FLTHRRHTEA

>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LTHRRHTEA 10
L HR TEA
Sbjct: 428 LLHREQTEA 436


>sp|METAA_METAX|HOMOSERINE O-acetyltransferase|Methanomethylophilus alvi (strain Mx1201)

Query: 1 FLTHRRHTE 9
+ H RHTE
Sbjct: 188 WFPHSRHTE 196


>sp|DAPB_METS3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LTHRRHT 8
THR HT
Sbjct: 234 FTHRAHT 240


>sp|METAA_THEXX|HOMOSERINE O-acetyltransferase|Thermoplasmatales archaeon (strain BRNA1)

Query: 1 FLTHRRHTE 9
+ H RHTE
Sbjct: 188 WFPHSRHTE 196


>sp|RFRNP_META3|RNA-FREE ribonuclease P|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 THRRHTE 9
TH+ HT+
Sbjct: 153 THKEHTD 159


>sp|CFBA_META3|SIROHYDROCHLORIN cobaltochelatase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FLTHRRHTE 9
FL H HT+
Sbjct: 69 FLAHGNHTK 77


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 1 FLTHRRH 7
F THR H
Sbjct: 56 FRTHRNH 62




75|SequenceR|380|371|ILTGCFLTHR

>sp|3MGH_METMJ|PUTATIVE 3-methyladenine DNA glycosylase|Methanoculleus marisnigri (strain

Query: 2 LTGCFLTHR 10
L GC L HR
Sbjct: 19 LLGCLLVHR 27


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 CFLTHR 10
C+LTH+
Sbjct: 550 CYLTHK 555


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 5 CFLTHR 10
C+LTH+
Sbjct: 550 CYLTHK 555


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 5 CFLTHR 10
C+LTH+
Sbjct: 550 CYLTHK 555


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 5 CFLTHR 10
C+LTH+
Sbjct: 550 CYLTHK 555




76|SequenceR|385|376|ARAQLILTGC

>sp|NFI_AERPE|ENDONUCLEASE V|Aeropyrum pernix (strain ATCC 700893

Query: 1 ARAQLILTG 9
ARAQL+L G
Sbjct: 16 ARAQLLLRG 24


>sp|RL18_NATPD|LARGE ribosomal subunit protein uL18|Natronomonas pharaonis (strain

Query: 2 RAQLILTG 9
+AQL++TG
Sbjct: 45 KAQLVVTG 52


>sp|KAE1_THEPD|TRNA N6-adenosine threonylcarbamoyltransferase|Thermofilum pendens

Query: 1 ARAQLILTG 9
++QL+LTG
Sbjct: 253 GKSQLVLTG 261


>sp|THIM_NATPD|HYDROXYETHYLTHIAZOLE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 AQLILTGC 10
AQ++ TGC
Sbjct: 194 AQIVGTGC 201




77|SequenceR|390|381|HPGVYARAQL

>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 1 HPGVYARAQL 10
HP + RAQL
Sbjct: 104 HPDQFTRAQL 113


>sp|TRMY_NATPD|TRNA (pseudouridine(54)-N(1))-methyltransferase|Natronomonas pharaonis

Query: 2 PGVYARAQ 9
PGVY R Q
Sbjct: 103 PGVYIRTQ 110


>sp|TRM14_PYRFU|TRNA (guanine(6)-N2)-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 1 HPGVYARAQL 10
HP V RA+L
Sbjct: 162 HPAVIFRAEL 171


>sp|GATD_NANEQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 HPGVYARAQ 9
HP VY+R +
Sbjct: 343 HPYVYSRGR 351




78|SequenceR|395|386|VVALVHPGVY

>sp|PYRF_THEAC|OROTIDINE 5'-phosphate decarboxylase|Thermoplasma acidophilum (strain ATCC

Query: 1 VVALVHPG 8
VVA+ HPG
Sbjct: 110 VVAMSHPG 117


>sp|PYRF_THEVO|OROTIDINE 5'-phosphate decarboxylase|Thermoplasma volcanium (strain ATCC

Query: 1 VVALVHPG 8
VVA+ HPG
Sbjct: 109 VVAMSHPG 116


>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 1 VVALVHPGV 9
VVA+ HP V
Sbjct: 471 VVAIAHPKV 479


>sp|DADD_METM5|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C5 /

Query: 2 VALVHPGV 9
VAL+H GV
Sbjct: 311 VALIHKGV 318


>sp|PRIS_NATPD|DNA primase small subunit PriS|Natronomonas pharaonis (strain ATCC

Query: 5 VHPGVY 10
VHP VY
Sbjct: 272 VHPAVY 277


>sp|Y916_METST|UPF0425 pyridoxal phosphate-dependent protein Msp_0916|Methanosphaera

Query: 1 VVALVHPG 8
++ALV PG
Sbjct: 90 IIALVKPG 97


>sp|RPO1C_METS5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Metallosphaera sedula (strain ATCC

Query: 3 ALVHPG 8
+LVHPG
Sbjct: 59 SLVHPG 64


>sp|Y1311_METJA|UNCHARACTERIZED protein MJ1311|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VALVHPG 8
V +VHPG
Sbjct: 115 VVVVHPG 121


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 1 VVALVHPGVY 10
+ L+HP V+
Sbjct: 244 ITYLIHPSVF 253


>sp|GFCR_METAR|TRANSCRIPTIONAL regulator GfcR|Methanocella arvoryzae (strain DSM 22066

Query: 2 VALVHPG 8
+A++HPG
Sbjct: 115 LAVIHPG 121


>sp|TIAS_METKA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanopyrus kandleri (strain

Query: 1 VVALVHPG 8
VVA +HPG
Sbjct: 312 VVAALHPG 319


>sp|GSA_METB6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoregula boonei (strain DSM 21154

Query: 6 HPGVY 10
HPG+Y
Sbjct: 313 HPGIY 317




79|SequenceR|400|391|FGTRTVVALV

>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 1 FGTRTVV 7
FGTRT+V
Sbjct: 414 FGTRTIV 420




80|SequenceR|405|396|GKATCFGTRT

>sp|TBP_METKA|TATA-BOX-BINDING protein|Methanopyrus kandleri (strain AV19 /

Query: 1 GKATCFGTRT 10
GKA C G +T
Sbjct: 152 GKAVCTGAKT 161


>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 1 GKATCFGT 8
GK+TC GT
Sbjct: 187 GKSTCTGT 194


>sp|Y115_METJA|UNCHARACTERIZED protein MJ0115|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKATCFGT 8
G+ TCFG+
Sbjct: 61 GENTCFGS 68


>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GKATCFGTR 9
G A CF T+
Sbjct: 144 GSALCFATK 152


>sp|MTTB_METTE|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina thermophila

Query: 4 TCFGT 8
TCFGT
Sbjct: 107 TCFGT 111


>sp|MTTB_METBF|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri (strain Fusaro /

Query: 4 TCFGT 8
TCFGT
Sbjct: 107 TCFGT 111


>sp|MTTB_METBA|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri

Query: 4 TCFGT 8
TCFGT
Sbjct: 107 TCFGT 111


>sp|MTTB2_METMA|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 TCFGT 8
TCFGT
Sbjct: 107 TCFGT 111


>sp|MTTB2_METAC|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina acetivorans (strain ATCC

Query: 4 TCFGT 8
TCFGT
Sbjct: 107 TCFGT 111


>sp|MTTB1_METMA|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 TCFGT 8
TCFGT
Sbjct: 107 TCFGT 111


>sp|MTTB1_METAC|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina acetivorans (strain ATCC

Query: 4 TCFGT 8
TCFGT
Sbjct: 107 TCFGT 111


>sp|MTTB_METBU|TRIMETHYLAMINE methyltransferase MttB|Methanococcoides burtonii (strain DSM 6242

Query: 4 TCFGT 8
TCFGT
Sbjct: 107 TCFGT 111


>sp|TBP2_METAC|TATA-BOX-BINDING protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GKATCFGTR 9
GK C GT+
Sbjct: 60 GKVVCTGTK 68


>sp|TBP1_METMA|TATA-BOX-BINDING protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GKATCFGTR 9
GK C GT+
Sbjct: 60 GKVVCTGTK 68


>sp|TBP_METST|TATA-BOX-BINDING protein|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GKATCFGTRT 10
GK C G +T
Sbjct: 151 GKVVCTGAKT 160


>sp|TBP_METS3|TATA-BOX-BINDING protein|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GKATCFGTRT 10
GK C G +T
Sbjct: 151 GKVVCTGAKT 160


>sp|Y498_METJA|UNCHARACTERIZED protein MJ0498|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KATCFG 7
K TCFG
Sbjct: 35 KETCFG 40


>sp|TBPD_HALSA|TATA-BOX-BINDING protein D|Halobacterium salinarum (strain ATCC 700922

Query: 1 GKATCFGTRT 10
GKA C G ++
Sbjct: 62 GKAVCTGAQS 71


>sp|GLYA_METPE|SERINE hydroxymethyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 GKATCF 6
GKA CF
Sbjct: 266 GKAVCF 271


>sp|TBP3_METAC|TATA-BOX-BINDING protein 3|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GKATCFGTRT 10
GK C G +T
Sbjct: 60 GKVVCTGAKT 69




81|SequenceR|410|401|SSVLGGKATC

>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 2 SVLGGKAT 9
SV+GGK T
Sbjct: 229 SVVGGKVT 236




82|SequenceR|415|406|RPHLISSVLG

>sp|AMPP2_ARCFU|AMP phosphorylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RPHLISSVL 9
+PHL++SVL
Sbjct: 259 KPHLMASVL 267


>sp|NADK_METB6|NAD kinase|Methanoregula boonei (strain DSM 21154

Query: 1 RPHLISS 7
RPHLISS
Sbjct: 203 RPHLISS 209


>sp|NADK_METMJ|NAD kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RPHLISS 7
RPHLIS+
Sbjct: 203 RPHLIST 209


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 1 RPHLISSVL 9
+P LI+SVL
Sbjct: 152 KPELIASVL 160


>sp|ADEC_ARCFU|ADENINE deaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PHLISSVLG 10
PH I++VLG
Sbjct: 109 PHEIANVLG 117


>sp|ADEC_METBU|ADENINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 2 PHLISSVLG 10
PH I++VLG
Sbjct: 110 PHEIANVLG 118


>sp|ADEC_METTP|ADENINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PHLISSVLG 10
PH I++VLG
Sbjct: 101 PHEIANVLG 109


>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PHLISSVLG 10
PH I++V+G
Sbjct: 79 PHEIANVMG 87


>sp|LYSY_SULTO|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PHLISSVLG 10
PH +SSV G
Sbjct: 233 PHAVSSVRG 241


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PHLISSVLG 10
PH I++V+G
Sbjct: 79 PHEIANVMG 87


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PHLISSVLG 10
PH I++V+G
Sbjct: 79 PHEIANVMG 87


>sp|ADEC_METST|ADENINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PHLISSVLG 10
PH I++V+G
Sbjct: 78 PHEIANVMG 86


>sp|ADEC_METTH|ADENINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 PHLISSVLG 10
PH I++V+G
Sbjct: 77 PHEIANVMG 85


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 2 PHLISSVLG 10
PH I +VLG
Sbjct: 121 PHEIGNVLG 129


>sp|LYSY_SACS2|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PHLISSVLG 10
PH +SS+ G
Sbjct: 236 PHAVSSIRG 244




83|SequenceR|420|411|KFNIPRPHLI

>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FNIPRPH 8
F IPRPH
Sbjct: 237 FGIPRPH 243


>sp|COOS2_METAC|CARBON monoxide dehydrogenase 2|Methanosarcina acetivorans (strain ATCC

Query: 2 FNIPRPH 8
F IP+PH
Sbjct: 237 FGIPKPH 243


>sp|NIFK_METTH|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 1 KFNIPRPHLI 10
+FNIP+ H I
Sbjct: 261 RFNIPKEHHI 270


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KFNIPRPHLI 10
K+ +P+ HLI
Sbjct: 220 KYQLPKEHLI 229


>sp|KTHY_PYRCJ|PROBABLE thymidylate kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 IPRPHL 9
+PRPHL
Sbjct: 113 VPRPHL 118


>sp|YIH50_HALSA|UNCHARACTERIZED protein in transposable element|Halobacterium salinarum (strain

Query: 2 FNIPRPHL 9
+ PRPHL
Sbjct: 114 LDAPRPHL 121


>sp|HEM1_SULTO|GLUTAMYL-TRNA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KFNIPRPHLI 10
K N+P P L+
Sbjct: 253 KINLPNPKLV 262


>sp|Y754_METJA|UNCHARACTERIZED protein MJ0754|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KFNIPRP 7
K+NIP P
Sbjct: 67 KYNIPDP 73


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KFNIPRP 7
K NIP+P
Sbjct: 210 KLNIPKP 216


>sp|HIS8_SACS2|HISTIDINOL-PHOSPHATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FNIPRPHLI 10
F+IP P LI
Sbjct: 269 FDIPLPSLI 277


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KFNIPRPHLI 10
KF++ R H+I
Sbjct: 945 KFHLTREHII 954


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KFNIPRPHLI 10
KF++ R H+I
Sbjct: 945 KFHLTREHII 954


>sp|Y1126_METTH|UNCHARACTERIZED protein MTH_1126|Methanothermobacter thermautotrophicus (strain

Query: 4 IPRPHLI 10
+PRPH I
Sbjct: 157 VPRPHRI 163


>sp|Y627_METJA|UNCHARACTERIZED protein MJ0627|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NIPRPHLI 10
N P PHLI
Sbjct: 68 NHPEPHLI 75




84|SequenceR|425|416|SHKYFKFNIP

>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 YFKFNIP 10
YFK NIP
Sbjct: 226 YFKLNIP 232


>sp|PSB1_AERPE|PROTEASOME subunit beta 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 SHKYFKFNI 9
S+K+F FN+
Sbjct: 94 SYKFFPFNV 102


>sp|IDI2_METMP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SHKYFKFNIP 10
S++YF + IP
Sbjct: 246 SNQYFNWGIP 255


>sp|DNAJ_METMZ|CHAPERONE protein DnaJ|Methanosarcina mazei (Methanosarcina frisia)

Query: 2 HKYFK 6
HKYFK
Sbjct: 257 HKYFK 261


>sp|DNAJ_METMA|CHAPERONE protein DnaJ|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HKYFK 6
HKYFK
Sbjct: 257 HKYFK 261


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 SHKYFKFNIP 10
+HK+F IP
Sbjct: 392 THKFFDGEIP 401


>sp|GLYA_NITMS|SERINE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 HKYFKFNIP 10
HK+F+ +IP
Sbjct: 21 HKWFENSIP 29


>sp|RL15_ARCFU|LARGE ribosomal subunit protein uL15|Archaeoglobus fulgidus (strain

Query: 2 HKYFKF 7
HKY KF
Sbjct: 43 HKYIKF 48




85|SequenceR|430|421|AVFKMSHKYF

>sp|CDC62_SACS2|ORC1-TYPE DNA replication protein 2|Saccharolobus solfataricus (strain ATCC

Query: 2 VFKMSHKYF 10
VFKM H+Y
Sbjct: 133 VFKMIHEYL 141


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 1 AVFKMSHK 8
AVFK+SH+
Sbjct: 367 AVFKISHE 374


>sp|DNAJ_METMZ|CHAPERONE protein DnaJ|Methanosarcina mazei (Methanosarcina frisia)

Query: 2 VFKMSHKYF 10
V M HKYF
Sbjct: 252 VHVMEHKYF 260


>sp|DNAJ_METMA|CHAPERONE protein DnaJ|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VFKMSHKYF 10
V M HKYF
Sbjct: 252 VHVMEHKYF 260


>sp|RPO3_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma volcanium (strain ATCC

Query: 2 VFKMSHKY 9
+FK+S KY
Sbjct: 5 IFKLSDKY 12


>sp|RPO3_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma acidophilum (strain ATCC

Query: 2 VFKMSHKY 9
+FK+S KY
Sbjct: 5 IFKLSDKY 12




86|SequenceR|435|426|LVSLAAVFKM

***** No hits found ******


87|SequenceR|440|431|TGLLALVSLA

>sp|HMEC_ARCPA|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus profundus

Query: 1 TGLLALVSLA 10
TG++ALV+LA
Sbjct: 154 TGVIALVALA 163




88|SequenceR|445|436|FISYITGLLA

>sp|UPPP_METM6|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C6 /

Query: 1 FISYITGLLA 10
FIS++TGLL
Sbjct: 209 FISFLTGLLG 218


>sp|RL18_STAMF|LARGE ribosomal subunit protein uL18|Staphylothermus marinus (strain

Query: 3 SYITGLLA 10
+Y+TGLLA
Sbjct: 83 AYLTGLLA 90


>sp|RL18_NATPD|LARGE ribosomal subunit protein uL18|Natronomonas pharaonis (strain

Query: 3 SYITGLLA 10
+Y+TGLLA
Sbjct: 82 AYLTGLLA 89


>sp|RL18_HALSA|LARGE ribosomal subunit protein uL18|Halobacterium salinarum (strain

Query: 3 SYITGLLA 10
+Y+TGLLA
Sbjct: 82 AYLTGLLA 89


>sp|RL18_HALS3|LARGE ribosomal subunit protein uL18|Halobacterium salinarum (strain

Query: 3 SYITGLLA 10
+Y+TGLLA
Sbjct: 82 AYLTGLLA 89


>sp|RL18_HALMA|LARGE ribosomal subunit protein uL18|Haloarcula marismortui (strain

Query: 3 SYITGLLA 10
+Y+TGLLA
Sbjct: 82 AYLTGLLA 89


>sp|RL18_DESA1|LARGE ribosomal subunit protein uL18|Desulfurococcus amylolyticus

Query: 3 SYITGLLA 10
+Y+TGLLA
Sbjct: 83 AYLTGLLA 90


>sp|GLYA_NATPD|SERINE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ISYITGLLA 10
I++ITGL+A
Sbjct: 200 IAHITGLVA 208


>sp|GLYA_HALWD|SERINE hydroxymethyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ISYITGLLA 10
I++ITGL+A
Sbjct: 200 IAHITGLVA 208


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 ISYITGLLA 10
I++ITGL+A
Sbjct: 200 IAHITGLVA 208


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ISYITGLLA 10
I++ITGL+A
Sbjct: 200 IAHITGLVA 208


>sp|GLYA_HALMA|SERINE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ISYITGLLA 10
I++ITGL+A
Sbjct: 200 IAHITGLVA 208


>sp|GLYA_HALLT|SERINE hydroxymethyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 2 ISYITGLLA 10
I++ITGL+A
Sbjct: 200 IAHITGLVA 208


>sp|GCH1L_PYRHO|GTP cyclohydrolase 1 type 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ISYITGLLA 10
ISY+ GL+A
Sbjct: 71 ISYVRGLIA 79


>sp|AROA_NATPD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 YITGLL 9
YITGLL
Sbjct: 166 YITGLL 171


>sp|RL18_IGNH4|LARGE ribosomal subunit protein uL18|Ignicoccus hospitalis (strain

Query: 4 YITGLLA 10
Y+TG+LA
Sbjct: 84 YLTGMLA 90


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ISYITGLLA 10
+SYI G+L+
Sbjct: 283 LSYIAGILS 291


>sp|UPPP_KORCO|UNDECAPRENYL-DIPHOSPHATASE cryptofilum (strain OPF8)

Query: 3 SYITGLLA 10
S+ITGL+A
Sbjct: 224 SFITGLIA 231


>sp|UPPP_METM5|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C5 /

Query: 2 ISYITGLLA 10
IS++TGLL
Sbjct: 210 ISFLTGLLG 218


>sp|UPPP_METM7|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C7 /

Query: 2 ISYITGLLA 10
IS++TGLL
Sbjct: 210 ISFLTGLLG 218


>sp|UPPP_METMP|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain DSM 14266

Query: 2 ISYITGLLA 10
IS++TGLL
Sbjct: 210 ISFLTGLLG 218




89|SequenceR|450|441|NRYLIFISYI

>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NRYLIFISY 9
NRY IF+ +
Sbjct: 5 NRYEIFLDF 13




90|SequenceR|455|446|NLPVRNRYLI

>sp|LADH_METJA|LACTALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NLPVRNRYLI 10
NLP+ RY I
Sbjct: 51 NLPITKRYNI 60


>sp|MPTE_METTH|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 1 NLPVRNRYL 9
NLP RYL
Sbjct: 127 NLPALRRYL 135


>sp|KPTA_PYRAE|PROBABLE RNA 2'-phosphotransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LPVRNRYL 9
LP+R RY+
Sbjct: 142 LPMRRRYV 149


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 LPVRNRYL 9
+P++N YL
Sbjct: 503 IPIKNEYL 510




91|SequenceR|460|451|RIVIENLPVR

>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RIVIENLPVR 10
RIV EN+P+R
Sbjct: 113 RIVKENVPIR 122


>sp|SELD_METKA|SELENIDE, water dikinase|Methanopyrus kandleri (strain AV19 /

Query: 1 RIVIENLPV 9
R+VIE LPV
Sbjct: 251 RVVIERLPV 259


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RIVIENLP 8
R+V+ENLP
Sbjct: 662 RLVMENLP 669


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 RIVIENLPVR 10
R+V+E+ PVR
Sbjct: 656 RVVMEDRPVR 665


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 RIVIENLPV 9
R++IEN PV
Sbjct: 204 RMIIENCPV 212


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 IVIENLPVR 10
IV +NLPV+
Sbjct: 678 IVTDNLPVK 686


>sp|GCH3_SACS2|GTP cyclohydrolase III|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 ENLPVR 10
ENLPVR
Sbjct: 77 ENLPVR 82


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RIVIENLPVR 10
R+ IEN P++
Sbjct: 1015 RLTIENYPIK 1024


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 RIVIENLPV 9
R+++EN P+
Sbjct: 208 RLIVENCPI 216


>sp|NADM_METAC|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 VIENLPVR 10
+ENLPVR
Sbjct: 60 ALENLPVR 67


>sp|Y054_METJA|UNCHARACTERIZED protein MJ0054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IVIENLPV 9
I IENLPV
Sbjct: 264 ISIENLPV 271


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IVIENLPVR 10
I+I+N P+R
Sbjct: 283 IIIQNKPMR 291


>sp|CHEB_HALMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Haloarcula marismortui

Query: 3 VIENLPV 9
V+ENLP+
Sbjct: 195 VMENLPI 201


>sp|AROC_METST|CHORISMATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 IVIENLPV 9
I+I+N+PV
Sbjct: 213 IIIDNVPV 220


>sp|NADM_METBF|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VIENLPVR 10
+ENLP+R
Sbjct: 60 ALENLPIR 67


>sp|RL10E_METPE|LARGE ribosomal subunit protein uL16|Methanosphaerula palustris (strain

Query: 1 RIVIENLPV 9
R+VIE +PV
Sbjct: 161 RLVIERVPV 169


>sp|ASPD_METAR|L-ASPARTATE dehydrogenase|Methanocella arvoryzae (strain DSM 22066

Query: 3 VIENLPVR 10
V+EN+P R
Sbjct: 235 VVENVPAR 242


>sp|MRE11_METMA|DNA double-strand break repair protein|Methanosarcina mazei (strain

Query: 3 VIENLPVR 10
VIENLP +
Sbjct: 174 VIENLPFK 181


>sp|RPO3_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum arsenaticum (strain DSM

Query: 1 RIVIENLPV 9
R++I LPV
Sbjct: 31 RVIISELPV 39


>sp|RPO3_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Sulfolobus acidocaldarius (strain

Query: 1 RIVIENLPVR 10
R+V+EN P+
Sbjct: 14 RLVLENYPLE 23


>sp|RPO3_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum aerophilum (strain ATCC

Query: 1 RIVIENLPV 9
R++I LPV
Sbjct: 31 RVIISELPV 39


>sp|FLAD_METJA|PUTATIVE flagella-related protein D|Methanocaldococcus jannaschii (strain

Query: 1 RIVIENLPVR 10
+I IEN P++
Sbjct: 120 KIEIENAPIK 129


>sp|G1PDH_SACS2|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus solfataricus (strain ATCC

Query: 3 VIENLP 8
VIENLP
Sbjct: 53 VIENLP 58


>sp|G1PDH_SACI6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.16.4 /

Query: 3 VIENLP 8
VIENLP
Sbjct: 53 VIENLP 58


>sp|G1PDH_SACI4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.14.25

Query: 3 VIENLP 8
VIENLP
Sbjct: 53 VIENLP 58


>sp|G1PDH_SACI3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.16.27)

Query: 3 VIENLP 8
VIENLP
Sbjct: 53 VIENLP 58


>sp|G1PDH_SACI7|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain

Query: 3 VIENLP 8
VIENLP
Sbjct: 53 VIENLP 58


>sp|G1PDH_SACI1|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain

Query: 3 VIENLP 8
VIENLP
Sbjct: 53 VIENLP 58




92|SequenceR|465|456|VLDLARIVIE

>sp|Y2294_THEKO|UPF0128 protein TK2294|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 LARIVIE 10
LARIVIE
Sbjct: 80 LARIVIE 86


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VLDLARIVIE 10
+LD+ARI+ E
Sbjct: 660 ILDVARIIRE 669


>sp|Y1564_METJA|UPF0201 protein MJ1564|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLDLARIVIE 10
+LD AR+V+E
Sbjct: 62 ILDAARMVLE 71


>sp|LYSY_IGNH4|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 VLDLARIVIE 10
++DL RIV++
Sbjct: 174 IIDLDRIVVD 183


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VLDLARIVIE 10
+LD+ARI+ E
Sbjct: 672 ILDVARIIRE 681


>sp|Y832_PYRAB|UPF0128 protein PYRAB08320|Pyrococcus abyssi (strain GE5 /

Query: 4 LARIVIE 10
LARIVIE
Sbjct: 80 LARIVIE 86


>sp|Y1488_PYRFU|UPF0128 protein PF1488|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LARIVIE 10
LARIVIE
Sbjct: 80 LARIVIE 86


>sp|PXPA_PYRFU|5-OXOPROLINASE subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DLARIVIE 10
DLAR VIE
Sbjct: 123 DLARAVIE 130


>sp|PRIL_HALSA|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 2 LDLARIVIE 10
+DLAR+V E
Sbjct: 23 VDLARVVTE 31


>sp|PRIL_HALS3|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 2 LDLARIVIE 10
+DLAR+V E
Sbjct: 23 VDLARVVTE 31


>sp|PXPA_PYRHO|5-OXOPROLINASE subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DLARIVIE 10
DLAR VIE
Sbjct: 123 DLARAVIE 130


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 2 LDLARIVI 9
L+LARIV+
Sbjct: 586 LELARIVV 593


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DLARIVIE 10
DLAR+++E
Sbjct: 203 DLARVILE 210


>sp|Y1037_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 VLDLARIVIE 10
V+D RIV+E
Sbjct: 207 VMDRGRIVLE 216




93|SequenceR|470|461|PVVVTVLDLA

>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 PVVVTVLDLA 10
PVVV +DLA
Sbjct: 815 PVVVKRIDLA 824




94|SequenceR|475|466|APLAPPVVVT

>sp|PUR7_METB6|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 PLAPPVVV 9
PL PPV+V
Sbjct: 112 PLKPPVIV 119


>sp|GATE_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus solfataricus (strain ATCC

Query: 1 APLAPPVVV 9
+P PPVV+
Sbjct: 496 SPRVPPVVI 504


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 5 PPVVVT 10
PPVVVT
Sbjct: 428 PPVVVT 433


>sp|Y1126_ARCFU|UNCHARACTERIZED protein AF_1126|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 APLAPPVVV 9
A L PPVV+
Sbjct: 121 ASLKPPVVI 129


>sp|ARGD_ARCFU|ACETYLORNITHINE aminotransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LAPPVVVT 10
L PP+V+T
Sbjct: 355 LVPPLVIT 362


>sp|RTCA_METS5|RNA 3'-terminal phosphate cyclase|Metallosphaera sedula (strain ATCC

Query: 2 PLAPPV 7
PL+PPV
Sbjct: 122 PLSPPV 127


>sp|RTCA_KORCO|RNA 3'-terminal phosphate cyclase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PLAPPV 7
PLAPP+
Sbjct: 126 PLAPPI 131


>sp|ARGD_METMA|ACETYLORNITHINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LAPPVVVT 10
L PP+V+T
Sbjct: 374 LVPPLVIT 381


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LAPPVVVT 10
L PP+V+T
Sbjct: 374 LVPPLVIT 381




95|SequenceR|480|471|CVTMAAPLAP

>sp|ILVC_HALWD|KETOL-ACID reductoisomerase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VTMAAPLAP 10
VTM AP AP
Sbjct: 148 VTMVAPKAP 156


>sp|RL24_HYPBU|LARGE ribosomal subunit protein uL24|Hyperthermus butylicus (strain DSM

Query: 4 MAAPLAP 10
MAAPL+P
Sbjct: 28 MAAPLSP 34


>sp|ILVC_NATPD|KETOL-ACID reductoisomerase (NADP(+))|Natronomonas pharaonis (strain ATCC

Query: 2 VTMAAPLAP 10
VTM AP +P
Sbjct: 126 VTMVAPKSP 134


>sp|ILVC_HALMA|KETOL-ACID reductoisomerase (NADP(+))|Haloarcula marismortui (strain ATCC

Query: 2 VTMAAPLAP 10
VTM AP +P
Sbjct: 129 VTMVAPKSP 137


>sp|PYRK_METBF|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina barkeri

Query: 5 AAPLAP 10
AAPLAP
Sbjct: 105 AAPLAP 110


>sp|ILVC_CALMQ|KETOL-ACID reductoisomerase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 2 VTMAAPLAP 10
VT+ AP AP
Sbjct: 124 VTLVAPKAP 132


>sp|ILVC_METTH|KETOL-ACID reductoisomerase (NADP(+))|Methanothermobacter thermautotrophicus

Query: 2 VTMAAPLAP 10
VTM AP P
Sbjct: 124 VTMVAPKGP 132


>sp|ILVC_METJA|KETOL-ACID reductoisomerase (NADP(+))|Methanocaldococcus jannaschii (strain

Query: 2 VTMAAPLAP 10
+TM AP +P
Sbjct: 125 ITMVAPKSP 133




96|SequenceR|485|476|QAYLTCVTMA

>sp|KHSE_METAR|HOMOSERINE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 QAYLTCV 7
+AY+TC+
Sbjct: 281 EAYVTCI 287




97|SequenceR|490|481|RRLRSQAYLT

>sp|PORC_METBF|PYRUVATE synthase subunit PorC|Methanosarcina barkeri (strain Fusaro /

Query: 2 RLRSQAY 8
RLRSQ Y
Sbjct: 59 RLRSQVY 65


>sp|RS4_THEPD|SMALL ribosomal subunit protein uS4|Thermofilum pendens (strain DSM 2475

Query: 1 RRLRSQAYLT 10
RR+RS YL
Sbjct: 136 RRVRSPGYLV 145




98|SequenceR|495|486|CFIGQRRLRS

***** No hits found ******


99|SequenceR|500|491|RLPHICFIGQ

>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RLPHICFIG 9
R+P++C IG
Sbjct: 586 RVPYMCVIG 594


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LPHICFI 8
+PHIC I
Sbjct: 298 VPHICLI 304


>sp|Y453_ARCFU|UNCHARACTERIZED protein AF_0453|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RLPHICF 7
R+PHI F
Sbjct: 71 RMPHIVF 77


>sp|GLMU_META3|BIFUNCTIONAL protein GlmU|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 RLPHICFIG 9
++PH+ +IG
Sbjct: 305 KVPHLSYIG 313


>sp|HMEC_ARCPA|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus

Query: 2 LPHICF 7
LP+ICF
Sbjct: 11 LPYICF 16


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 LPHICFIG 9
+P+IC +G
Sbjct: 547 IPYICVVG 554


>sp|MTBA_METMA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RLPHICF 7
R+P +CF
Sbjct: 21 RMPAVCF 27


>sp|MTBA_METBA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina barkeri

Query: 1 RLPHICF 7
R+P +CF
Sbjct: 21 RMPAVCF 27


>sp|MTBA_METAC|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina acetivorans (strain ATCC

Query: 1 RLPHICF 7
R+P +CF
Sbjct: 21 RMPAVCF 27


>sp|S1PNA_SULTO|BIFUNCTIONAL sugar-1-phosphate

Query: 1 RLPHICFIG 9
++PH+ ++G
Sbjct: 305 KIPHLSYVG 313


>sp|GLMU_METVS|BIFUNCTIONAL protein GlmU|Methanococcus vannielii (strain ATCC 35089

Query: 1 RLPHICFIG 9
++PH+ ++G
Sbjct: 309 KIPHLSYVG 317


>sp|GLMU_METMP|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain DSM 14266

Query: 1 RLPHICFIG 9
++PH+ ++G
Sbjct: 305 KIPHLSYVG 313


>sp|GLMU_METM7|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C7 /

Query: 1 RLPHICFIG 9
++PH+ ++G
Sbjct: 305 KIPHLSYVG 313


>sp|GLMU_METM5|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C5 /

Query: 1 RLPHICFIG 9
++PH+ ++G
Sbjct: 305 KIPHLSYVG 313


>sp|GLMU_METJA|BIFUNCTIONAL protein GlmU|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RLPHICFIG 9
++PH+ ++G
Sbjct: 303 KIPHLSYVG 311


>sp|RFCS_METMJ|REPLICATION factor C small subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 LPHICFIG 9
LPH+ F G
Sbjct: 39 LPHLLFTG 46


>sp|RFCS_METLZ|REPLICATION factor C small subunit|Methanocorpusculum labreanum (strain ATCC

Query: 2 LPHICFIG 9
LPH+ F G
Sbjct: 39 LPHLLFTG 46


>sp|RFCS_METB6|REPLICATION factor C small subunit|Methanoregula boonei (strain DSM 21154

Query: 2 LPHICFIG 9
LPH+ F G
Sbjct: 39 LPHLLFTG 46


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 LPHICFIG 9
+P+IC +G
Sbjct: 547 VPYICVVG 554


>sp|CDC6Z_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 1 RLPHICFIG 9
R P++C +G
Sbjct: 146 REPNVCIVG 154


>sp|CDC6V_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 1 RLPHICFIG 9
R P++C +G
Sbjct: 146 REPNVCIVG 154


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 3 PHICFIGQ 10
P +C+ GQ
Sbjct: 168 PKVCWFGQ 175


>sp|AHBC_METBF|FE-COPROPORPHYRIN III synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RLPHICF 7
++P ICF
Sbjct: 205 KIPRICF 211


>sp|RFCS_PICTO|REPLICATION factor C small subunit|Picrophilus torridus (strain ATCC 700027

Query: 2 LPHICFIG 9
LPH+ F G
Sbjct: 36 LPHLIFAG 43


>sp|RFCS_THEVO|REPLICATION factor C small subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LPHICFIG 9
LPH+ F G
Sbjct: 36 LPHLLFAG 43


>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LPHICFIG 9
LPH+ F G
Sbjct: 37 LPHLLFYG 44


>sp|RFCS_NATPD|REPLICATION factor C small subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LPHICFIG 9
LPH+ F G
Sbjct: 45 LPHLLFAG 52


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LPHICFIG 9
LPH+ F G
Sbjct: 48 LPHLLFAG 55


>sp|RFCS_HALSA|REPLICATION factor C small subunit|Halobacterium salinarum (strain ATCC

Query: 2 LPHICFIG 9
LPH+ F G
Sbjct: 43 LPHLLFAG 50


>sp|RFCS_HALS3|REPLICATION factor C small subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 LPHICFIG 9
LPH+ F G
Sbjct: 43 LPHLLFAG 50


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 2 LPHIC 6
+PHIC
Sbjct: 300 IPHIC 304


>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 1 RLPHICFIGQ 10
++ HIC + Q
Sbjct: 660 QIAHICILAQ 669


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LPHICFIG 9
+P++C +G
Sbjct: 545 VPYVCVVG 552




100|SequenceR|505|496|GGLNIRLPHI

>sp|AROE_METAR|SHIKIMATE dehydrogenase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 1 GGLNIRLPH 9
GGLN+ +PH
Sbjct: 57 GGLNVTIPH 65


>sp|Y961_METJA|MCM-LIKE protein MJ0961|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGLNIRLP 8
GG+N++LP
Sbjct: 476 GGINVKLP 483


>sp|HIS5_SULTO|IMIDAZOLE glycerol phosphate synthase subunit|Sulfurisphaera tokodaii (strain

Query: 4 NIRLPHI 10
N++LPHI
Sbjct: 108 NVKLPHI 114


>sp|HIS5_SACS2|IMIDAZOLE glycerol phosphate synthase subunit|Saccharolobus solfataricus

Query: 4 NIRLPHI 10
N++LPHI
Sbjct: 108 NVKLPHI 114


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GGLNIRLP 8
GGL+IR P
Sbjct: 551 GGLSIRFP 558


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 GGLNIRLP 8
GGL+IR P
Sbjct: 553 GGLSIRFP 560


>sp|AROE_METKA|SHIKIMATE dehydrogenase (NADP(+))|Methanopyrus kandleri (strain AV19 /

Query: 2 GLNIRLPH 9
GLN+ +PH
Sbjct: 67 GLNVTIPH 74


>sp|AROE_THEKO|SHIKIMATE dehydrogenase (NADP(+))|Thermococcus kodakarensis (strain ATCC

Query: 2 GLNIRLPH 9
GLN+ +PH
Sbjct: 62 GLNVTMPH 69


>sp|AROE_METST|SHIKIMATE dehydrogenase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 2 GLNIRLPH 9
GLN+ +PH
Sbjct: 62 GLNVTIPH 69


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 GLNIRLPHI 10
G NIRL H+
Sbjct: 703 GTNIRLIHV 711


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGLNIRLP 8
GG+N +LP
Sbjct: 421 GGINAKLP 428


>sp|COBQ_METB6|PROBABLE cobyric acid synthase|Methanoregula boonei (strain DSM 21154

Query: 5 IRLPHI 10
IRLPHI
Sbjct: 252 IRLPHI 257


>sp|PFDA_METHJ|PREFOLDIN subunit alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GGLNIR 6
GGLNIR
Sbjct: 65 GGLNIR 70


>sp|TRPD_PYRAB|ANTHRANILATE phosphoribosyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 GLNIRLP 8
GLNI++P
Sbjct: 119 GLNIKIP 125


>sp|HIS5_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 4 NIRLPHI 10
N+R PHI
Sbjct: 105 NVRTPHI 111


>sp|UVRC_HALWD|UVRABC system protein C|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GLNIRLP 8
G+NIR+P
Sbjct: 339 GVNIRVP 345


>sp|AROE_METMP|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain DSM

Query: 2 GLNIRLPH 9
G NI +PH
Sbjct: 62 GFNITIPH 69


>sp|AROE_NITMS|SHIKIMATE dehydrogenase (NADP(+))|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GGLNIRLPH 9
G N+ +PH
Sbjct: 57 AGFNVTIPH 65


>sp|AROE_IGNH4|SHIKIMATE dehydrogenase (NADP(+))|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GLNIRLPH 9
G+N+ +PH
Sbjct: 55 GINVTIPH 62


>sp|AROE_PYRNV|SHIKIMATE dehydrogenase (NADP(+))|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GLNIRLPH 9
G N+ +PH
Sbjct: 56 GFNVTIPH 63


>sp|AROE_PYRIL|SHIKIMATE dehydrogenase (NADP(+))|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GLNIRLPH 9
G N+ +PH
Sbjct: 56 GFNVTIPH 63


>sp|AROE_PYRAE|SHIKIMATE dehydrogenase (NADP(+))|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GLNIRLPH 9
G N+ +PH
Sbjct: 56 GFNVTIPH 63


>sp|RIFK_ARCFU|RIBOFLAVIN kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGLNIRLP 8
G LN+R+P
Sbjct: 142 GTLNLRIP 149


>sp|Y133_METTH|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 2 GLNIRLPHI 10
G N+RLP I
Sbjct: 237 GANLRLPRI 245


>sp|AROE_META3|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus aeolicus (strain ATCC

Query: 2 GLNIRLPH 9
G NI +PH
Sbjct: 62 GFNITIPH 69


>sp|HEM1_METTM|GLUTAMYL-TRNA reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 LNIRLPH 9
LNIRL H
Sbjct: 3 LNIRLDH 9


>sp|AROE_THEVO|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GLNIRLPH 9
G N+ +PH
Sbjct: 59 GFNVTIPH 66


>sp|HEM1_METTH|GLUTAMYL-TRNA reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 LNIRLPH 9
LNIRL H
Sbjct: 6 LNIRLDH 12


>sp|AROE_METJA|SHIKIMATE dehydrogenase (NADP(+))|Methanocaldococcus jannaschii (strain

Query: 2 GLNIRLPH 9
G N+ +PH
Sbjct: 62 GFNVTIPH 69


>sp|AROE_METM6|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain C6 /

Query: 1 GGLNIRLPH 9
G N+ +PH
Sbjct: 61 AGFNVTIPH 69


>sp|AROE_SULTO|SHIKIMATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GLNIRLPH 9
GLNI +P+
Sbjct: 63 GLNITIPY 70


>sp|AROE_METS3|SHIKIMATE dehydrogenase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 2 GLNIRLPH 9
G N+ +PH
Sbjct: 62 GFNVTIPH 69


>sp|SYH_AERPE|HISTIDINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GGLNIRL 7
GGLN+R+
Sbjct: 366 GGLNVRI 372


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 GLNIRLPH 9
G+N+ +PH
Sbjct: 459 GVNVDVPH 466


>sp|SURE_METBU|5'-NUCLEOTIDASE SurE|Methanococcoides burtonii (strain DSM 6242

Query: 3 LNIRLPH 9
LNI +PH
Sbjct: 175 LNINIPH 181


>sp|SYD_THEVO|ASPARTATE--TRNA(ASP) ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GLNIRLPHI 10
G+NI +P I
Sbjct: 265 GINISIPEI 273


>sp|AROE_CALMQ|SHIKIMATE dehydrogenase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 2 GLNIRLPH 9
G N+ +PH
Sbjct: 56 GFNVTIPH 63


>sp|Y087_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 4 NIRLPHI 10
NIRLP I
Sbjct: 63 NIRLPRI 69


>sp|AROE_METM7|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain C7 /

Query: 2 GLNIRLPH 9
G N+ +PH
Sbjct: 62 GFNVTIPH 69


>sp|RIFK_METM6|RIBOFLAVIN kinase|Methanococcus maripaludis (strain C6 /

Query: 1 GGLNIRLPH 9
G LN++L H
Sbjct: 38 GTLNVKLKH 46


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 GGLNIRLPHI 10
GG++ +PH+
Sbjct: 122 GGIHSYMPHL 131


>sp|AROE_METTH|SHIKIMATE dehydrogenase (NADP(+))|Methanothermobacter thermautotrophicus

Query: 2 GLNIRLPH 9
G+N+ +PH
Sbjct: 62 GVNVTIPH 69


>sp|MTAD_PYRFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LNIRLPHI 10
+N+R PH+
Sbjct: 360 INLRRPHL 367


>sp|RIFK_METMP|RIBOFLAVIN kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GGLNIRLPH 9
G LN++L H
Sbjct: 38 GTLNVKLKH 46


>sp|RIFK_METM7|RIBOFLAVIN kinase|Methanococcus maripaludis (strain C7 /

Query: 1 GGLNIRLPH 9
G LN++L H
Sbjct: 38 GTLNVKLKH 46


>sp|RIFK_METM5|RIBOFLAVIN kinase|Methanococcus maripaludis (strain C5 /

Query: 1 GGLNIRLPH 9
G LN++L H
Sbjct: 38 GTLNVKLKH 46




101|SequenceR|510|501|VLQLKGGLNI

>sp|Y772_ARCFU|UNCHARACTERIZED protein AF_0772|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QLKGGLN 9
QLKGGL+
Sbjct: 267 QLKGGLD 273


>sp|TRUD_THEON|PROBABLE tRNA pseudouridine synthase D|Thermococcus onnurineus (strain NA1)

Query: 1 VLQLKGGL 8
V+Q+KGG+
Sbjct: 291 VVQIKGGI 298


>sp|TRUD_THEKO|PROBABLE tRNA pseudouridine synthase D|Thermococcus kodakarensis (strain

Query: 1 VLQLKGGL 8
V+Q+KGG+
Sbjct: 291 VVQVKGGI 298


>sp|TRUD_THEGJ|PROBABLE tRNA pseudouridine synthase D|Thermococcus gammatolerans (strain

Query: 1 VLQLKGGL 8
V+Q+KGG+
Sbjct: 290 VVQVKGGI 297


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 QLKGGLNI 10
+LKGGL +
Sbjct: 393 ELKGGLTV 400


>sp|PIMT_THESM|PROTEIN-L-ISOASPARTATE O-methyltransferase|Thermococcus sibiricus (strain DSM 12597

Query: 3 QLKGGLNI 10
+L+GG+N+
Sbjct: 77 ELEGGMNV 84




102|SequenceR|515|506|TKDFCVLQLK

>sp|CHEB_ARCFU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Archaeoglobus fulgidus

Query: 1 TKDFCVL 7
TKD CVL
Sbjct: 154 TKDVCVL 160


>sp|SAHH_THEKO|ADENOSYLHOMOCYSTEINASE kodakarensis (strain ATCC BAA-918

Query: 1 TKDFCV 6
TKD+CV
Sbjct: 4 TKDYCV 9


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 2 KDFCVLQ 8
KD+CVL+
Sbjct: 420 KDWCVLE 426


>sp|RNH2_METLZ|RIBONUCLEASE HII|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TKDFCVLQLK 10
T+D C+ LK
Sbjct: 146 TRDRCIADLK 155




103|SequenceR|520|511|ETLTGTKDFC

>sp|TRUA_HALSA|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC

Query: 1 ETLTGTKDF 9
+ LTGT DF
Sbjct: 131 DRLTGTHDF 139


>sp|TRUA_HALS3|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC 29341

Query: 1 ETLTGTKDF 9
+ LTGT DF
Sbjct: 131 DRLTGTHDF 139


>sp|TRUA_PYRIL|TRNA pseudouridine synthase A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ETLTGTKDF 9
E L GT DF
Sbjct: 113 EVLAGTHDF 121


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LTGTKDFC 10
L G K+FC
Sbjct: 41 LIGVKEFC 48


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TLTGTKDF 9
TLTG DF
Sbjct: 402 TLTGKADF 409


>sp|ACDE1_METTE|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 1 ETLTGTKDF 9
+ L+GTK+F
Sbjct: 123 QVLSGTKNF 131


>sp|ACDE1_METMA|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina mazei

Query: 1 ETLTGTKDF 9
+ L+GTK+F
Sbjct: 123 QVLSGTKNF 131


>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 ETLTGTKDF 9
+TLT KDF
Sbjct: 773 KTLTKNKDF 781


>sp|ACDE2_METAC|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 1 ETLTGTKDF 9
+ L+GTK+F
Sbjct: 123 QVLSGTKNF 131




104|SequenceR|525|516|VDLGDETLTG

>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 VDLGDETLT 9
VDLGDE T
Sbjct: 650 VDLGDEVRT 658


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VDLGDETLTG 10
+D+GD+ L G
Sbjct: 149 IDIGDQLLVG 158


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VDLGDET 7
VD+GDET
Sbjct: 591 VDIGDET 597


>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDLGDETLT 9
VDLG +TLT
Sbjct: 139 VDLGGKTLT 147


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 VDLGDETLTG 10
+D+GD T+T
Sbjct: 595 IDIGDRTVTA 604


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VDLGDE 6
VDLGDE
Sbjct: 669 VDLGDE 674


>sp|Y1413_SULTO|PROTEIN STK_14130|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VDLGDETLTG 10
+++G+E LTG
Sbjct: 9 INIGNEILTG 18


>sp|COBQ_HALMA|PROBABLE cobyric acid synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VDLGDETLTG 10
+ +GD TLTG
Sbjct: 404 IHMGDSTLTG 413


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDLGDE 6
VDLGDE
Sbjct: 578 VDLGDE 583


>sp|Y1593_PYRAB|PROTEIN PYRAB15930|Pyrococcus abyssi (strain GE5 /

Query: 1 VDLGDETLTG 10
+ +GDE LTG
Sbjct: 6 ITVGDELLTG 15


>sp|Y476_PYRFU|PROTEIN PF0476|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VDLGDETLTG 10
+ +GDE LTG
Sbjct: 6 ITVGDELLTG 15


>sp|SYFB_NATPD|PHENYLALANINE--TRNA ligase beta subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VDLGDETLT 9
VD GD TLT
Sbjct: 273 VDYGDRTLT 281


>sp|Y439_PYRHO|PROTEIN PH0439|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VDLGDETLTG 10
+ +GDE LTG
Sbjct: 9 ITVGDELLTG 18


>sp|RL18_PYRAR|LARGE ribosomal subunit protein uL18|Pyrobaculum arsenaticum (strain

Query: 3 LGDETLTG 10
+GDET+ G
Sbjct: 54 IGDETVAG 61


>sp|Y1472_THEKO|PROTEIN TK1472|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LGDETLTG 10
+GDE LTG
Sbjct: 8 IGDELLTG 15


>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 1 VDLGDETL 8
VD+GDE +
Sbjct: 309 VDVGDEVI 316


>sp|CPGS_THEGJ|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus gammatolerans

Query: 1 VDLGDETLTG 10
VDL DE + G
Sbjct: 75 VDLSDEPIVG 84


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VDLGDETLTG 10
V +G+E LTG
Sbjct: 29 VKVGEEKLTG 38


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 4 GDETLTG 10
GD+T+TG
Sbjct: 304 GDDTITG 310


>sp|MTAD_THESM|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus sibiricus (strain DSM 12597

Query: 1 VDLGDE 6
VDLGDE
Sbjct: 144 VDLGDE 149


>sp|TRM56_IGNH4|TRNA (cytidine(56)-2'-O)-methyltransferase|Ignicoccus hospitalis (strain

Query: 2 DLGDET 7
DLGDET
Sbjct: 213 DLGDET 218


>sp|MAP2_ARCFU|METHIONINE aminopeptidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VDLGDET 7
VDLGD T
Sbjct: 101 VDLGDNT 107


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 1 VDLGDETLTG 10
+++ +ETLTG
Sbjct: 782 IEVRNETLTG 791




105|SequenceR|530|521|PVVGMVDLGD

>sp|MTAD_THESM|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus sibiricus (strain DSM 12597

Query: 4 GMVDLGD 10
GMVDLGD
Sbjct: 142 GMVDLGD 148


>sp|MTAD_THEKO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GMVDLGD 10
GM+DLGD
Sbjct: 142 GMIDLGD 148


>sp|RL10_THESM|LARGE ribosomal subunit protein uL10|Thermococcus sibiricus (strain DSM

Query: 1 PVVGMVDLGD 10
PV+ +VD+ D
Sbjct: 23 PVIALVDVAD 32


>sp|MTAD_THEON|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus onnurineus (strain NA1)

Query: 4 GMVDLGD 10
GM+DLGD
Sbjct: 142 GMIDLGD 148


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 GMVDLGD 10
GM+DLGD
Sbjct: 144 GMIDLGD 150


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 MVDLGD 10
MVDLGD
Sbjct: 577 MVDLGD 582


>sp|DADD_METS3|5'-DEOXYADENOSINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 GMVDLGD 10
GM+D GD
Sbjct: 146 GMIDFGD 152


>sp|GCSH3_SULAC|PROBABLE glycine cleavage system H|Sulfolobus acidocaldarius (strain ATCC

Query: 3 VGMVDLG 9
VGM DLG
Sbjct: 32 VGMTDLG 38


>sp|AROD_METHJ|3-DEHYDROQUINATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PVVGMVDLGD 10
P +G+VD+ D
Sbjct: 89 PYIGLVDIID 98


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 VVGMVDLGD 10
+ GM+DLG+
Sbjct: 295 LAGMIDLGE 303


>sp|RL10_METJA|LARGE ribosomal subunit protein uL10|Methanocaldococcus jannaschii

Query: 1 PVVGMVDLGD 10
PVV +VD+ D
Sbjct: 28 PVVAIVDMMD 37


>sp|DADD_METKA|5'-DEOXYADENOSINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 4 GMVDLGD 10
GM+DLG+
Sbjct: 147 GMIDLGE 153


>sp|OTC_METLZ|ORNITHINE carbamoyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 3 VGMVDLG 9
VGM DLG
Sbjct: 61 VGMYDLG 67


>sp|HMGCS_METMA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GMVDLG 9
GMVDLG
Sbjct: 130 GMVDLG 135


>sp|Y555_METJA|PUTATIVE aminopeptidase MJ0555|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PVVGMVD 7
PVVG+VD
Sbjct: 253 PVVGIVD 259


>sp|HMGCS_METBF|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 GMVDLG 9
GM+DLG
Sbjct: 130 GMIDLG 135




106|SequenceR|535|526|AQGKLPVVGM

>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 AQGKLPVVGM 10
+QG++ VVGM
Sbjct: 140 SQGEVKVVGM 149


>sp|TDXH1_PICTO|PEROXIREDOXIN 1|Picrophilus torridus (strain ATCC 700027

Query: 2 QGKLPVVG 9
+GK+P++G
Sbjct: 2 EGKMPLIG 9


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 QGKLPVVG 9
+GKLPV G
Sbjct: 1431 EGKLPVEG 1438


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 1 AQGKLPVVG 9
A+GK PV G
Sbjct: 440 AKGKCPVCG 448


>sp|RAD50_PYRAB|DNA double-strand break repair Rad50|Pyrococcus abyssi (strain GE5 /

Query: 1 AQGKLPVVG 9
A+GK PV G
Sbjct: 438 AKGKCPVCG 446


>sp|CARA_METVS|CARBAMOYL phosphate synthase small chain|Methanococcus vannielii (strain ATCC

Query: 3 GKLPVVGM 10
GKLPV G+
Sbjct: 239 GKLPVTGI 246


>sp|RAD50_PYRHO|DNA double-strand break repair Rad50|Pyrococcus horikoshii (strain ATCC

Query: 1 AQGKLPVVG 9
A+GK PV G
Sbjct: 437 ARGKCPVCG 445


>sp|PDXS_METLZ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanocorpusculum labreanum

Query: 2 QGKLPVVG 9
GKLPVV
Sbjct: 201 NGKLPVVN 208


>sp|PDXS_METTH|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanothermobacter

Query: 3 GKLPVV 8
GKLPVV
Sbjct: 202 GKLPVV 207


>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 QGKLPVVGM 10
+GK+P+ G+
Sbjct: 319 KGKIPIFGI 327


>sp|COBQ_METAC|PROBABLE cobyric acid synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QGKLPVVGM 10
+GK+P+ G+
Sbjct: 319 KGKIPIFGI 327




107|SequenceR|540|531|VLPLFAQGKL

>sp|SUA5_SULTO|THREONYLCARBAMOYL-AMP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VLPLFAQGK 9
V+P FAQGK
Sbjct: 213 VIPEFAQGK 221


>sp|Y1574_METJA|UNCHARACTERIZED ATP-dependent helicase MJ1574|Methanocaldococcus jannaschii (strain

Query: 2 LPLFAQGKL 10
+P F++GKL
Sbjct: 540 MPYFSRGKL 548


>sp|NQOR_ARCFU|NAD(P)H dehydrogenase (quinone)|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VLPLFAQGKL 10
+LPLFA G +
Sbjct: 134 LLPLFAHGMI 143


>sp|THII_METMA|PROBABLE tRNA sulfurtransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LPLFAQGKL 10
LPL QGK+
Sbjct: 190 LPLGTQGKM 198


>sp|SYP_CENSY|PROLINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 LPLFAQG 8
+PLFA+G
Sbjct: 469 IPLFARG 475


>sp|THII_THEVO|TRNA sulfurtransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LPLFAQGKL 10
LPL ++GKL
Sbjct: 163 LPLGSEGKL 171


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VLPLFAQGK 9
+ PLF +GK
Sbjct: 370 IRPLFCRGK 378


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VLPLFAQGK 9
+ PLF +GK
Sbjct: 370 IRPLFCRGK 378


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 1 VLPLFAQGKL 10
++ LFA+GK+
Sbjct: 392 LVTLFAEGKI 401


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 1 VLPLFAQGKL 10
++ LFA+GK+
Sbjct: 392 LINLFAEGKI 401


>sp|NTPPA_METMA|DTTP/UTP pyrophosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LPLFAQGKL 10
LPLF GK+
Sbjct: 175 LPLFRLGKI 183


>sp|FLAH_SULAC|ARCHAEAL flagellar ATP-binding protein FlaH|Sulfolobus acidocaldarius

Query: 1 VLPLFAQGKL 10
++P F +GKL
Sbjct: 74 LIPYFIRGKL 83




108|SequenceR|545|536|RRPEPVLPLF

>sp|GLMU_METVS|BIFUNCTIONAL protein GlmU|Methanococcus vannielii (strain ATCC 35089

Query: 2 RPEPVLPL 9
RP+P++P+
Sbjct: 21 RPKPMIPI 28


>sp|GLMU_METMP|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain DSM 14266

Query: 2 RPEPVLPL 9
RP+P++P+
Sbjct: 21 RPKPMIPI 28


>sp|GLMU_METM5|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C5 /

Query: 2 RPEPVLPL 9
RP+P++P+
Sbjct: 21 RPKPMIPI 28


>sp|GLMU_METJA|BIFUNCTIONAL protein GlmU|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RPEPVLPL 9
RP+P++P+
Sbjct: 21 RPKPMIPI 28


>sp|GLMU_METM7|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C7 /

Query: 2 RPEPVLPL 9
RP+P++P+
Sbjct: 21 RPKPMIPI 28


>sp|THII_HALSA|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RRPEPVLPLF 10
RR PV+PL+
Sbjct: 203 RRGAPVIPLY 212


>sp|THII_HALS3|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RRPEPVLPLF 10
RR PV+PL+
Sbjct: 203 RRGAPVIPLY 212


>sp|Y1902_METTH|UPF0173 metal-dependent hydrolase MTH_1902|Methanothermobacter

Query: 2 RPEPVLPL 9
+PE VLP+
Sbjct: 184 KPEKVLPM 191


>sp|CBIMQ_METLZ|PUTATIVE fused cobalt transport protein|Methanocorpusculum labreanum (strain

Query: 3 PEPVLPLF 10
P P LPLF
Sbjct: 377 PLPYLPLF 384


>sp|Y748_THEPD|PROTEIN Tpen_0748|Thermofilum pendens (strain DSM 2475

Query: 3 PEPVLPL 9
PEPVLPL
Sbjct: 73 PEPVLPL 79


>sp|RIBL_METEZ|FAD synthase|Methanohalobium evestigatum (strain ATCC BAA-1072

Query: 2 RPEPVLP 8
+P+PV+P
Sbjct: 55 KPKPVIP 61


>sp|Y138_META3|PROTEIN Maeo_0138|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PEPVLPLF 10
PEPV+PL
Sbjct: 63 PEPVMPLI 70


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 2 RPEPVLP 8
RP+PVLP
Sbjct: 204 RPKPVLP 210


>sp|Y810_METJA|PROTEIN MJ0810|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PEPVLPLF 10
PEP++PL
Sbjct: 63 PEPIMPLI 70


>sp|SYH_PYRHO|HISTIDINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RPEPVLPL 9
RP+ VLPL
Sbjct: 220 RPDNVLPL 227


>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 RRPEPVLPLF 10
R+ +PVLP +
Sbjct: 508 RKEKPVLPFW 517


>sp|Y534_THEGJ|UPF0284 protein TGAM_0534|Thermococcus gammatolerans (strain DSM 15229

Query: 2 RPEPVLPLF 10
R EP LP F
Sbjct: 104 RKEPALPEF 112


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 3 PEPVLPLF 10
PE +LPL+
Sbjct: 511 PEQLLPLY 518


>sp|DTDA_METPE|D-AMINOACYL-TRNA deacylase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 RRPEPVL 7
RRP PVL
Sbjct: 70 RRPVPVL 76


>sp|RIBL_METP4|FAD synthase|Methanolacinia petrolearia (strain DSM 11571

Query: 2 RPEPVLP 8
+P+PV+P
Sbjct: 44 KPKPVIP 50


>sp|MPGP_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PEPVLPL 9
PEP +P+
Sbjct: 19 PEPAIPI 25




109|SequenceR|550|541|PGVPLRRPEP

>sp|HPRL_HALUD|HGPRTASE-LIKE protein|Halorhabdus utahensis (strain DSM 12940

Query: 2 GVPLRRPE 9
GVP+ RPE
Sbjct: 29 GVPMLRPE 36


>sp|HPRL_HALMD|HGPRTASE-LIKE protein|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 GVPLRRPE 9
GVP+ RPE
Sbjct: 29 GVPMLRPE 36


>sp|HPRL2_HALMA|HGPRTASE-LIKE protein 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 GVPLRRPE 9
GVP+ RPE
Sbjct: 29 GVPMLRPE 36


>sp|TPIS_METBR|TRIOSEPHOSPHATE isomerase|Methanobacterium bryantii

Query: 2 GVPLRRPEP 10
G+P+ +PEP
Sbjct: 153 GIPVSKPEP 161


>sp|CAR_HALS3|TRANSDUCER protein Car|Halobacterium salinarum (strain ATCC 29341

Query: 2 GVPLRRP 8
GVPLR P
Sbjct: 136 GVPLRAP 142


>sp|CSG_HALSA|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 700922

Query: 2 GVPLRRPEP 10
GVPL+ P P
Sbjct: 105 GVPLQMPIP 113


>sp|CSG_HALS3|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 29341

Query: 2 GVPLRRPEP 10
GVPL+ P P
Sbjct: 105 GVPLQMPIP 113


>sp|HPRL1_HALWD|HGPRTASE-LIKE protein 1|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GVPLRRPE 9
GVP+ RPE
Sbjct: 29 GVPVLRPE 36


>sp|HPRL1_HALWC|HGPRTASE-LIKE protein 1|Haloquadratum walsbyi (strain DSM 16854

Query: 2 GVPLRRPE 9
GVP+ RPE
Sbjct: 29 GVPVLRPE 36


>sp|HPRT_METM7|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 GVPLRRPE 9
GVPL +PE
Sbjct: 30 GVPLVKPE 37


>sp|TPIS_METTH|TRIOSEPHOSPHATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GVPLRRPEP 10
G+P+ R EP
Sbjct: 156 GIPVSRAEP 164


>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 2 GVPLRRPEP 10
G+P++ P+P
Sbjct: 110 GMPIKVPKP 118


>sp|HPRL_HALLT|HGPRTASE-LIKE protein|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 GVPLRRPE 9
GVP+ +PE
Sbjct: 29 GVPMLKPE 36


>sp|COBS_METAC|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GVPLRRPE 9
G PL RPE
Sbjct: 169 GKPLPRPE 176


>sp|RS5_HALWD|SMALL ribosomal subunit protein uS5|Haloquadratum walsbyi (strain DSM

Query: 2 GVPLRRPE 9
G+PL+ PE
Sbjct: 36 GLPLKEPE 43


>sp|Y1609_METJA|UNCHARACTERIZED ATP-binding protein MJ1609|Methanocaldococcus jannaschii (strain

Query: 2 GVPLRRPEP 10
G+P++ P+P
Sbjct: 110 GMPIKIPKP 118


>sp|HPRT_METMP|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 GVPLRRPE 9
GVPL PE
Sbjct: 30 GVPLVEPE 37


>sp|HPRT_METM6|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 GVPLRRPE 9
GVPL PE
Sbjct: 30 GVPLVEPE 37


>sp|PGMMM_THEKO|PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE kodakarensis (strain ATCC BAA-918

Query: 4 PLRRPEP 10
P R PEP
Sbjct: 213 PARNPEP 219


>sp|HPRT_METM5|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 GVPLRRPE 9
GVPL PE
Sbjct: 30 GVPLVEPE 37


>sp|RL3_THEVO|LARGE ribosomal subunit protein uL3|Thermoplasma volcanium (strain ATCC

Query: 1 PGVPLRRPE 9
PG+P ++PE
Sbjct: 145 PGIPSKKPE 153


>sp|RL3_THEAC|LARGE ribosomal subunit protein uL3|Thermoplasma acidophilum (strain ATCC

Query: 1 PGVPLRRPE 9
PG+P ++PE
Sbjct: 145 PGIPSKKPE 153


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 4 PLRRPEP 10
P R PEP
Sbjct: 199 PARNPEP 205


>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PLRRPEP 10
P R PEP
Sbjct: 199 PARNPEP 205


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 4 PLRRPEP 10
P R PEP
Sbjct: 199 PARNPEP 205


>sp|HPRT_METVS|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 2 GVPLRRPE 9
GVPL PE
Sbjct: 30 GVPLVEPE 37


>sp|KCY_AERPE|CYTIDYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGVPLRRP 8
GVPLRR
Sbjct: 109 DGVPLRRA 116


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 PGVPLR 6
PG+P+R
Sbjct: 230 PGIPIR 235


>sp|URE3_HALMA|UREASE subunit gamma|Haloarcula marismortui (strain ATCC 43049

Query: 2 GVPLRRPEP 10
GVPL PE
Sbjct: 27 GVPLNHPEA 35


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PGVPLR 6
PG+P+R
Sbjct: 230 PGIPIR 235


>sp|TBP_ARCFU|TATA-BOX-BINDING protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGVPLRRPEP 10
PG+ LR EP
Sbjct: 41 PGLVLRTKEP 50


>sp|CBID_THEAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GVPLRRPEP 10
G+P+RR +P
Sbjct: 109 GLPVRRGDP 117


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 PLRRPEP 10
P+R+P P
Sbjct: 183 PIRKPRP 189


>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 2 GVPLRRPE 9
GVP+RR +
Sbjct: 379 GVPIRRAD 386


>sp|TRMY_HALLT|TRNA (pseudouridine(54)-N(1))-methyltransferase|Halorubrum lacusprofundi

Query: 1 PGVPLRR 7
PGV LRR
Sbjct: 103 PGVELRR 109


>sp|RS5_METBF|SMALL ribosomal subunit protein uS5|Methanosarcina barkeri (strain

Query: 2 GVPLRRPE 9
G+P+R P+
Sbjct: 32 GLPIREPQ 39




110|SequenceR|555|546|LARLLPGVPL

>sp|Y584_THEVO|PROTEIN TV0584|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LLPGVPL 10
+LPGVP+
Sbjct: 147 ILPGVPM 153


>sp|RL6_AERPE|LARGE ribosomal subunit protein uL6|Aeropyrum pernix (strain ATCC 700893

Query: 1 LARLLPGV 8
+AR++PGV
Sbjct: 122 IARIMPGV 129


>sp|Y1514_METVS|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus

Query: 1 LARLLPGVPL 10
+AR+L VPL
Sbjct: 62 IARILQAVPL 71


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 2 ARLLPG 7
ARLLPG
Sbjct: 531 ARLLPG 536


>sp|ACKA_METMZ|ACETATE kinase|Methanosarcina mazei (Methanosarcina frisia)

Query: 4 LLPGVPL 10
++PGVP+
Sbjct: 137 IMPGVPM 143


>sp|ACKA_METMA|ACETATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LLPGVPL 10
++PGVP+
Sbjct: 137 IMPGVPM 143


>sp|ACKA_METAC|ACETATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 LLPGVPL 10
++PGVP+
Sbjct: 137 IMPGVPM 143


>sp|ACKA_METTE|ACETATE kinase|Methanosarcina thermophila

Query: 2 ARLLPGVPL 10
A ++PG P+
Sbjct: 135 AEIMPGTPM 143


>sp|ACKA_METBF|ACETATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ARLLPGVPL 10
A ++PG P+
Sbjct: 135 AEIMPGTPM 143


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 LARLLPGVPL 10
L+R+LPG L
Sbjct: 88 LSRILPGASL 97


>sp|Y487_THEAC|PROTEIN Ta0487|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 LLPGVP 9
+LPGVP
Sbjct: 147 ILPGVP 152


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RLLPGVPL 10
R+ PGVP+
Sbjct: 217 RITPGVPV 224


>sp|G1PDH_METHJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LARLLPGVPL 10
L RL+PG L
Sbjct: 267 LERLMPGAAL 276


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 3 RLLPGVPL 10
RL+ GVPL
Sbjct: 482 RLIAGVPL 489




111|SequenceR|560|551|AHCTALARLL

***** No hits found ******


112|SequenceR|565|556|QLRSLAHCTA

***** No hits found ******


113|SequenceR|570|561|GVPTDQLRSL

>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GVPTDQLRSL 10
G+PTD+L +
Sbjct: 319 GIPTDKLEKM 328


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GVPTDQLRSL 10
GVP +QL+++
Sbjct: 573 GVPPEQLKAI 582


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GVPTDQL 7
G+P DQL
Sbjct: 756 GIPNDQL 762


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 GVPTDQL 7
G+P DQL
Sbjct: 756 GIPNDQL 762


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 GVPTDQL 7
G+P DQL
Sbjct: 756 GIPNDQL 762


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 GVPTDQL 7
G+P DQL
Sbjct: 756 GIPNDQL 762


>sp|RL10_STAMF|LARGE ribosomal subunit protein uL10|Staphylothermus marinus (strain

Query: 1 GVPTDQLRSL 10
G PT+QL+ L
Sbjct: 40 GFPTNQLQKL 49


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GVPTDQL 7
G+P DQL
Sbjct: 181 GIPEDQL 187


>sp|IF2P_NATPD|PROBABLE translation initiation factor IF-2|Natronomonas pharaonis (strain

Query: 2 VPTDQLRSL 10
+PTD+L +L
Sbjct: 578 IPTDELEAL 586


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GVPTDQLRSL 10
G+P +QL L
Sbjct: 559 GIPKEQLEEL 568


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 2 VPTDQLRSL 10
V DQLRSL
Sbjct: 834 VTADQLRSL 842


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 2 VPTDQLRSL 10
VP DQL L
Sbjct: 567 VPNDQLEKL 575


>sp|PSB_THEAC|PROTEASOME subunit beta|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VPTDQLRS 9
+PTDQ+ S
Sbjct: 195 LPTDQIES 202




114|SequenceR|575|566|LDMPDGVPTD

>sp|MFNF_METVA|(4- vannielii

Query: 2 DMPDGVPTD 10
D PDG P D
Sbjct: 99 DTPDGKPAD 107


>sp|RL6_METTP|LARGE ribosomal subunit protein uL6|Methanothrix thermoacetophila

Query: 1 LDMPDGV 7
LD+PDGV
Sbjct: 9 LDIPDGV 15


>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DMPDGVPT 9
D+PD VPT
Sbjct: 297 DIPDLVPT 304


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 2 DMPDGVP 8
D PDG+P
Sbjct: 997 DRPDGLP 1003


>sp|Y735_METS5|UPF0284 protein Msed_0735|Metallosphaera sedula (strain ATCC 51363

Query: 4 PDGVPT 9
PDG+PT
Sbjct: 71 PDGIPT 76


>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MPDGVPTD 10
+P+ +PTD
Sbjct: 423 LPENIPTD 430


>sp|AROA_METM6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 DMPDGVPT 9
D+PD VPT
Sbjct: 308 DIPDLVPT 315


>sp|AROA_METM5|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 DMPDGVPT 9
D+PD VPT
Sbjct: 308 DIPDLVPT 315


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi (strain

Query: 2 DMPDGVPT 9
D P G+PT
Sbjct: 220 DDPKGIPT 227


>sp|AROA_METJA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocaldococcus jannaschii (strain

Query: 2 DMPDGVPT 9
D+PD VPT
Sbjct: 308 DIPDLVPT 315


>sp|AROA_METMP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 DMPDGVPT 9
D+PD VPT
Sbjct: 308 DIPDLVPT 315


>sp|MTAP_CENSY|S-METHYL-5'-THIOADENOSINE phosphorylase|Cenarchaeum symbiosum (strain A)

Query: 1 LDMPDGVPTD 10
+D P G P+D
Sbjct: 10 MDTPYGAPSD 19


>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LDMPDGV 7
LD+PDGV
Sbjct: 130 LDIPDGV 136


>sp|AROA_METM7|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 DMPDGVPT 9
D+PD VPT
Sbjct: 308 DIPDLVPT 315


>sp|PYRC_SACS2|DIHYDROOROTASE solfataricus (strain ATCC 35092

Query: 2 DMPDGVP 8
DMP+ VP
Sbjct: 85 DMPNSVP 91


>sp|FEN_PYRNV|FLAP endonuclease 1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 PDGVP 8
PDGVP
Sbjct: 242 PDGVP 246


>sp|FEN_PYRAE|FLAP endonuclease 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PDGVP 8
PDGVP
Sbjct: 242 PDGVP 246


>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDMPDGVP 8
LD+ DGVP
Sbjct: 51 LDLVDGVP 58


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LDMPDGVPTD 10
+ +P+G+P D
Sbjct: 35 IKLPEGLPQD 44


>sp|MRE11_METJA|DNA double-strand break repair protein|Methanocaldococcus jannaschii

Query: 1 LDMPDGV 7
+DMPD V
Sbjct: 308 IDMPDNV 314


>sp|PURE_METSM|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanobrevibacter

Query: 1 LDMPDGVP 8
++MP GVP
Sbjct: 291 VNMPPGVP 298


>sp|HEM1_HALWD|GLUTAMYL-TRNA reductase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DMPDGVP 8
D+PD VP
Sbjct: 438 DLPDDVP 444


>sp|FEN_PYRAR|FLAP endonuclease 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PDGVP 8
PDGVP
Sbjct: 242 PDGVP 246


>sp|Y1534_PYRCJ|UPF0284 protein Pcal_1534|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 PDGVPT 9
PDG+PT
Sbjct: 59 PDGIPT 64


>sp|Y2029_AERPE|UPF0284 protein APE_2029.1|Aeropyrum pernix (strain ATCC 700893

Query: 4 PDGVPT 9
P+GVPT
Sbjct: 77 PEGVPT 82


>sp|FEN_PYRIL|FLAP endonuclease 1|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PDGVP 8
PDGVP
Sbjct: 242 PDGVP 246


>sp|RNH2_THEPD|RIBONUCLEASE HII|Thermofilum pendens (strain DSM 2475

Query: 1 LDMPDGVPT 9
+D PD VP+
Sbjct: 112 MDSPDPVPS 120


>sp|AROA_META3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus aeolicus (strain ATCC

Query: 2 DMPDGVPT 9
D PD VPT
Sbjct: 312 DTPDLVPT 319


>sp|G6PI_HALSA|PROBABLE glucose-6-phosphate isomerase|Halobacterium salinarum (strain ATCC

Query: 1 LDMPDGVP 8
LD P GVP
Sbjct: 181 LDAPRGVP 188


>sp|SURE_THEKO|5'-NUCLEOTIDASE SurE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 DGVPTD 10
DG PTD
Sbjct: 68 DGTPTD 73


>sp|SURE_ARCFU|5'-NUCLEOTIDASE SurE|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 DGVPTD 10
DG PTD
Sbjct: 67 DGTPTD 72


>sp|TYSY_METKA|PUTATIVE thymidylate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 LDMPDGVPTD 10
D+PD P D
Sbjct: 58 FDIPDDYPLD 67


>sp|Y372_PYRAE|UPF0284 protein PAE0372|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PDGVPT 9
P+G+PT
Sbjct: 59 PEGIPT 64


>sp|Y153_THEVO|UPF0284 protein TV0153|Thermoplasma volcanium (strain ATCC 51530

Query: 4 PDGVPT 9
P+G+PT
Sbjct: 73 PEGIPT 78


>sp|Y078_THEAC|UPF0284 protein Ta0078|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PDGVPT 9
P+G+PT
Sbjct: 75 PEGIPT 80


>sp|RNH2_METKA|RIBONUCLEASE HII|Methanopyrus kandleri (strain AV19 /

Query: 1 LDMPDGV 7
LD+P+G+
Sbjct: 113 LDLPEGI 119




115|SequenceR|580|571|SEVMKLDMPD

>sp|IF2P_METTP|PROBABLE translation initiation factor IF-2|Methanothrix thermoacetophila

Query: 1 SEVMKLDMP 9
SE+ KLD+P
Sbjct: 431 SEIQKLDIP 439


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 2 EVMKLDMPD 10
EV++LD+P+
Sbjct: 270 EVLRLDVPE 278


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 EVMKLDMPD 10
E +KLD+P+
Sbjct: 270 EALKLDVPE 278


>sp|KATG_HALSA|CATALASE-PEROXIDASE salinarum (strain ATCC 700922

Query: 1 SEVMKLDMPD 10
SEVMKLD D
Sbjct: 709 SEVMKLDRFD 718


>sp|KATG_HALS3|CATALASE-PEROXIDASE salinarum (strain ATCC 29341

Query: 1 SEVMKLDMPD 10
SEVMKLD D
Sbjct: 709 SEVMKLDRFD 718


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SEVMKLDMPD 10
SE++KLD+ +
Sbjct: 94 SEIIKLDLAN 103


>sp|SECY_PYRAB|PROTEIN translocase subunit SecY|Pyrococcus abyssi (strain GE5 /

Query: 1 SEVMKLDMPD 10
SE++KLD+ +
Sbjct: 94 SEIIKLDLAN 103


>sp|RS10_METS3|SMALL ribosomal subunit protein uS10|Methanobrevibacter smithii (strain

Query: 2 EVMKLDMPD 10
+VMK+++PD
Sbjct: 84 QVMKVNVPD 92


>sp|RS10_METST|SMALL ribosomal subunit protein uS10|Methanosphaera stadtmanae (strain

Query: 2 EVMKLDMPD 10
+VMK+++PD
Sbjct: 84 QVMKVNVPD 92


>sp|GPMA_METVS|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC 35089

Query: 2 EVMKLDMP 9
EV+KL++P
Sbjct: 198 EVLKLEIP 205


>sp|RS10_METTH|SMALL ribosomal subunit protein uS10|Methanothermobacter

Query: 2 EVMKLDMPD 10
+VMK+++PD
Sbjct: 84 QVMKVNVPD 92


>sp|Y948_METJA|UNCHARACTERIZED protein MJ0948|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SEVMKLDM 8
SEV+KLD+
Sbjct: 67 SEVLKLDL 74


>sp|RSMA_METBU|PROBABLE ribosomal RNA small subunit|Methanococcoides burtonii (strain DSM

Query: 1 SEVMKLDMP 9
+V+KLD+P
Sbjct: 91 GDVLKLDLP 99


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 EVMKLDMPD 10
E++KLD P+
Sbjct: 120 ELLKLDTPE 128


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 1 SEVMKLDM 8
S++MKLD+
Sbjct: 372 SDIMKLDV 379




116|SequenceR|585|576|LVWGTSEVMK

>sp|SYC_METAC|CYSTEINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 WGTSEVMK 10
WGTS+ ++
Sbjct: 441 WGTSDTLR 448


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 VWGTSEVM 9
VWG +EV+
Sbjct: 337 VWGENEVL 344


>sp|Y2234_ARCFU|UNCHARACTERIZED protein AF_2234|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WGTSEVMK 10
+GTSEV+K
Sbjct: 32 FGTSEVIK 39


>sp|THIL_METTH|THIAMINE-MONOPHOSPHATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VWGTSEVM 9
V+G+SEVM
Sbjct: 24 VFGSSEVM 31


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 1 LVWGTS 6
LVWGT+
Sbjct: 183 LVWGTN 188


>sp|FTSZ1_HALSA|CELL division protein FtsZ 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 LVWGTS 6
++WGTS
Sbjct: 331 IIWGTS 336


>sp|FTSZ1_HALS3|CELL division protein FtsZ 1|Halobacterium salinarum (strain ATCC 29341

Query: 1 LVWGTS 6
++WGTS
Sbjct: 331 IIWGTS 336




117|SequenceR|590|581|APEEELVWGT

>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 APEEELVW 8
AP+EE++W
Sbjct: 421 APDEEMIW 428


>sp|FTSZ2_METJA|CELL division protein FtsZ 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PEEELVWG 9
PE ++WG
Sbjct: 315 PEANVIWG 322


>sp|FTSZ1_THEKO|CELL division protein FtsZ 1|Thermococcus kodakarensis (strain ATCC

Query: 2 PEEELVWG 9
PE +++WG
Sbjct: 316 PEAQVIWG 323


>sp|DHYS_METVS|PROBABLE deoxyhypusine synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PEEELVWG 9
PEE + WG
Sbjct: 300 PEEGVSWG 307


>sp|THPS_SULAC|THERMOPSIN acidocaldarius (strain ATCC 33909

Query: 3 EEELVWG 9
+ ELVWG
Sbjct: 257 DAELVWG 263


>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 2 PEEELVWGT 10
P+E++ WG+
Sbjct: 182 PDEDVYWGS 190


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 PEEELVW 8
P+EE++W
Sbjct: 423 PDEEMIW 429


>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 2 PEEELVW 8
P+E+L+W
Sbjct: 423 PDEDLIW 429


Query: 2 PEEELVWGT 10
P+E+ WG+
Sbjct: 182 PQEDTYWGS 190


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 2 PEEELVW 8
P EEL+W
Sbjct: 428 PAEELIW 434


Query: 2 PEEELVWGT 10
P++++ WG+
Sbjct: 187 PDQDVYWGS 195


>sp|SYDND_HALWD|ASPARTATE--TRNA(ASP/ASN) ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 EEELVWG 9
+E+LVWG
Sbjct: 297 DEQLVWG 303


>sp|SYDND_HALVO|ASPARTATE--TRNA(ASP/ASN) ligase|Haloferax volcanii (Halobacterium volcanii)

Query: 3 EEELVWG 9
+E+LVWG
Sbjct: 296 DEQLVWG 302


>sp|AATB_THEPD|A-TYPE ATP synthase subunit B|Thermofilum pendens (strain DSM 2475

Query: 2 PEEELV 7
PEEELV
Sbjct: 439 PEEELV 444


>sp|RL2_METLZ|LARGE ribosomal subunit protein uL2|Methanocorpusculum labreanum

Query: 4 EELVWG 9
+ELVWG
Sbjct: 81 QELVWG 86


>sp|DHYS_METJA|PROBABLE deoxyhypusine synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PEEELVWG 9
PEE + WG
Sbjct: 295 PEEGVSWG 302


>sp|PANE_THEKO|2-DEHYDROPANTOATE 2-reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 APEEELVW 8
AP EL+W
Sbjct: 281 APRNELLW 288


>sp|SYDND_NATPD|ASPARTATE--TRNA(ASP/ASN) ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 EEELVWG 9
+E+LVWG
Sbjct: 297 DEQLVWG 303


>sp|MVHB_METTM|POLYFERREDOXIN protein MvhB|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 APEEELVW 8
A EE LVW
Sbjct: 273 ASEEGLVW 280


>sp|MVHB_METTH|POLYFERREDOXIN protein MvhB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 APEEELVW 8
A EE LVW
Sbjct: 273 ASEEGLVW 280


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 2 PEEELVW 8
PEE L+W
Sbjct: 405 PEETLIW 411


Query: 1 APEEELVWG 9
AP+E + WG
Sbjct: 162 APDESVDWG 170


>sp|KHSE_METAR|HOMOSERINE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 3 EEELVW 8
+EELVW
Sbjct: 111 KEELVW 116




118|SequenceR|595|586|FASDAAPEEE

>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ASDAAPEEE 10
SDA PEE+
Sbjct: 472 GSDALPEEQ 480


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 1 FASDAAPEEE 10
FASD EEE
Sbjct: 235 FASDTLREEE 244




119|SequenceR|600|591|LVQTGFASDA

***** No hits found ******


120|SequenceR|605|596|PRMVALVQTG

>sp|TRMI_PYRAB|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 1 PRMVALVQTG 10
PR ALV TG
Sbjct: 236 PRTTALVHTG 245


>sp|FLUC1_NATPD|FLUORIDE-SPECIFIC ion channel FluC 1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PRMVALVQTG 10
PR VALV G
Sbjct: 3 PRAVALVAGG 12




121|SequenceR|610|601|PEWLPPRMVA

>sp|SYH_PYRIL|HISTIDINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 EWLPPRMVA 10
+WLPP+ A
Sbjct: 17 DWLPPQFYA 25


>sp|SYH_PYRAE|HISTIDINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EWLPPRMVA 10
+WLPP+ A
Sbjct: 17 DWLPPQYYA 25


>sp|SYH_PYRNV|HISTIDINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 EWLPPRMVA 10
+WLPP++ A
Sbjct: 17 DWLPPQLYA 25


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 EWLPPRMV 9
+WLP R V
Sbjct: 156 QWLPDRFV 163


>sp|CS3HE_THETK|CRISPR-ASSOCIATED helicase Cas3|Thermoproteus tenax (strain ATCC 35583

Query: 2 EWLPPRM 8
EW PRM
Sbjct: 76 EWFAPRM 82


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 EWLPPRMV 9
+WLP R V
Sbjct: 139 QWLPDRYV 146


>sp|ARAT2_THELN|AROMATIC-AMINO-ACID aminotransferase 2|Thermococcus litoralis (strain ATCC 51850

Query: 1 PEWLPPRMV 9
PEW+ +MV
Sbjct: 248 PEWVVEKMV 256


>sp|AROC_METBU|CHORISMATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 4 LPPRMV 9
+PPRMV
Sbjct: 332 IPPRMV 337


>sp|PMDHL_AERPE|PHOSPHOMEVALONATE dehydratase large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 PEWLPPRM 8
PEW PR+
Sbjct: 185 PEWRKPRV 192




122|SequenceR|615|606|MAQLQPEWLP

>sp|FPON_METMA|F(420)H(2) dehydrogenase subunit N|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MAQLQPEW 8
+A LQP+W
Sbjct: 266 LAALQPDW 273


>sp|Y1865_ARCFU|UNCHARACTERIZED protein AF_1865|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MAQLQPEWL 9
+A ++PEW+
Sbjct: 188 VALMEPEWI 196


>sp|SEPS_METTP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 QLQPEW 8
QLQP+W
Sbjct: 353 QLQPDW 358


>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MAQLQPEWL 9
MA+ QPE++
Sbjct: 321 MAEFQPEFV 329


>sp|RS7_AERPE|SMALL ribosomal subunit protein uS7|Aeropyrum pernix (strain ATCC

Query: 4 LQPEWLP 10
L+P WLP
Sbjct: 45 LKPVWLP 51


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 5 QPEWL 9
QPEW+
Sbjct: 684 QPEWI 688


>sp|METE_PYRAB|METHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 LQPEWL 9
L+PEWL
Sbjct: 283 LEPEWL 288


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 5 QPEWL 9
QPEW+
Sbjct: 671 QPEWI 675


>sp|Y416_METJA|DOUBLE zinc ribbon protein MJ0416|Methanocaldococcus jannaschii (strain

Query: 4 LQPEWL 9
+QPEW+
Sbjct: 172 VQPEWI 177


>sp|CDPAS_METAR|CDP-ARCHAEOL synthase|Methanocella arvoryzae (strain DSM 22066

Query: 4 LQPEWL 9
L PEWL
Sbjct: 132 LDPEWL 137


>sp|CFBA_METKA|SIROHYDROCHLORIN cobaltochelatase|Methanopyrus kandleri (strain AV19 /

Query: 1 MAQLQPEW 8
M L+PEW
Sbjct: 83 MLGLEPEW 90




123|SequenceR|620|611|VPPEEMAQLQ

>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 PPEEMAQLQ 10
PPE+MA+L+
Sbjct: 7 PPEQMAELE 15


>sp|AROE_THEKO|SHIKIMATE dehydrogenase (NADP(+))|Thermococcus kodakarensis (strain ATCC

Query: 1 VPPEEMAQ 8
VPPEE+ +
Sbjct: 43 VPPEELGE 50


>sp|PSLS_METTH|PHOSPHOSULFOLACTATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VPPEEMAQLQ 10
+PPEE+ L+
Sbjct: 233 IPPEEITALE 242


>sp|TRPD_METPE|ANTHRANILATE phosphoribosyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 VPPEEMAQLQ 10
+PP +A+LQ
Sbjct: 256 IPPVNIAELQ 265




124|SequenceR|625|616|LVSVPVPPEE

>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 2 VSVPVPPE 9
VSVPVPPE
Sbjct: 13 VSVPVPPE 20


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 2 VSVPVPPEE 10
VSVPVPP +
Sbjct: 13 VSVPVPPPD 21


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain

Query: 1 LVSVPVPPEE 10
LVSV +PPE+
Sbjct: 29 LVSVYIPPEK 38


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei

Query: 2 VSVPVPPEE 10
+SVPVPP +
Sbjct: 13 ISVPVPPPD 21


>sp|Y335_METJA|UNCHARACTERIZED protein MJ0335|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LVSVPVPP 8
L S PVPP
Sbjct: 225 LASAPVPP 232


>sp|TRM1_METAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina acetivorans

Query: 2 VSVPVPPEE 10
+SVP+PP +
Sbjct: 13 ISVPIPPPD 21


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LVSVPVPPEE 10
LVS+ + PEE
Sbjct: 166 LVSIGINPEE 175


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 2 VSVPVPPEE 10
VS P PP++
Sbjct: 11 VSTPCPPDK 19


>sp|TF2B_SACSH|TRANSCRIPTION initiation factor IIB|Saccharolobus shibatae (strain ATCC 51178

Query: 2 VSVPVPPEE 10
VS P PP++
Sbjct: 8 VSTPCPPDK 16


>sp|RS2_PYRIL|SMALL ribosomal subunit protein uS2|Pyrobaculum islandicum (strain DSM

Query: 4 VPVPPEE 10
+PVPPEE
Sbjct: 194 LPVPPEE 200


>sp|CIMA_METJA|(R)-CITRAMALATE synthase CimA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LVSVPVPPEE 10
L+ +PVPP +
Sbjct: 263 LMKLPVPPNK 272


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 5 PVPPE 9
PVPPE
Sbjct: 304 PVPPE 308


>sp|RS2_PYRCJ|SMALL ribosomal subunit protein uS2|Pyrobaculum calidifontis (strain DSM

Query: 3 SVPVPPEE 10
+PVPPEE
Sbjct: 193 DLPVPPEE 200


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SVPVPP 8
SVP+PP
Sbjct: 982 SVPIPP 987


>sp|RF1_THEVO|PEPTIDE chain release factor subunit|Thermoplasma volcanium (strain ATCC

Query: 1 LVSVPVPPEE 10
L+S+ +PPE+
Sbjct: 32 LISLYIPPEK 41


>sp|Y1815_ARCFU|UNCHARACTERIZED aminotransferase AF_1815|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VSVPVPPEE 10
+ +P+PPE+
Sbjct: 203 LGMPLPPED 211


>sp|CDC62_SULAC|ORC1-TYPE DNA replication protein 2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LVSVPVP 7
LVS+P+P
Sbjct: 386 LVSLPIP 392


>sp|RS2_PYRAE|SMALL ribosomal subunit protein uS2|Pyrobaculum aerophilum (strain ATCC

Query: 4 VPVPPEE 10
+PVPPEE
Sbjct: 194 LPVPPEE 200


>sp|THIL_METHJ|THIAMINE-MONOPHOSPHATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 VPVPPE 9
+P+PPE
Sbjct: 218 IPLPPE 223


>sp|RS2_PYRAR|SMALL ribosomal subunit protein uS2|Pyrobaculum arsenaticum (strain DSM

Query: 4 VPVPPEE 10
+PVPPEE
Sbjct: 194 LPVPPEE 200


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter

Query: 1 LVSVPVPPE 9
LVSV +PP+
Sbjct: 29 LVSVYIPPD 37


>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VPVPPEE 10
VPVP EE
Sbjct: 121 VPVPEEE 127


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 2 VSVPVPP 8
V +PVPP
Sbjct: 137 VGLPVPP 143


>sp|AROE_IGNH4|SHIKIMATE dehydrogenase (NADP(+))|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 VSVPVPPE 9
VS+P+PP+
Sbjct: 187 VSMPIPPD 194


>sp|RL5_AERPE|LARGE ribosomal subunit protein uL5|Aeropyrum pernix (strain ATCC

Query: 3 SVPVPPEE 10
S+P+PPE
Sbjct: 7 SLPIPPER 14


>sp|CIMA_METKA|PUTATIVE (R)-citramalate synthase CimA|Methanopyrus kandleri (strain AV19 /

Query: 5 PVPPEE 10
P+PPE+
Sbjct: 313 PIPPEK 318


>sp|RS2_PYRNV|SMALL ribosomal subunit protein uS2|Pyrobaculum neutrophilum (strain DSM

Query: 4 VPVPPEE 10
+PVPPEE
Sbjct: 193 LPVPPEE 199


>sp|T1S2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii (strain

Query: 2 VSVPVPPEE 10
+ +P+PP E
Sbjct: 155 IKIPLPPLE 163


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VSVPVP 7
VSVPVP
Sbjct: 1960 VSVPVP 1965


>sp|ATGT_NATPD|TRNA-GUANINE(15) transglycosylase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VSVPVPPE 9
V +P PPE
Sbjct: 127 VDIPTPPE 134


>sp|LEU1_PYRAE|PROBABLE 2-isopropylmalate synthase|Pyrobaculum aerophilum (strain ATCC

Query: 1 LVSVPVPPEE 10
L VPVPP +
Sbjct: 269 LFGVPVPPNK 278


>sp|TRPD_METMJ|ANTHRANILATE phosphoribosyltransferase|Methanoculleus marisnigri (strain ATCC

Query: 2 VSVPVPPE 9
VSV +PP+
Sbjct: 130 VSVAIPPD 137


>sp|CISY_PYRFU|CITRATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 VPVPPEE 10
+PV PEE
Sbjct: 115 IPVTPEE 121


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LVSVPVPPEE 10
P PPEE
Sbjct: 730 FTKTPTPPEE 739


>sp|Y130_ARCFU|PROBABLE deacetylase AF_0130|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VSVPVPP 8
V++P+PP
Sbjct: 209 VNIPLPP 215


>sp|CYDK_THEKO|CYTIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 PVPPEE 10
P+PPEE
Sbjct: 122 PIPPEE 127




125|SequenceR|630|621|FPFRHLVSVP

>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PFRHLVSV 9
PFRHL+ V
Sbjct: 346 PFRHLIVV 353


>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain ATCC

Query: 1 FPFRHLVSVP 10
P HL+SVP
Sbjct: 217 LPKMHLISVP 226


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 FPFRHLVSVP 10
P HL+SVP
Sbjct: 216 LPKMHLISVP 225


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 1 FPFRHLVSVP 10
P HL+SVP
Sbjct: 222 LPKMHLISVP 231


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 1 FPFRHLVSVP 10
P HL+SVP
Sbjct: 222 LPKMHLISVP 231


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PFRHLVSVP 10
P R L+S+P
Sbjct: 536 PLRQLLSIP 544


>sp|G1PDH_METMJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoculleus marisnigri (strain ATCC

Query: 4 RHLVSVP 10
RH +SVP
Sbjct: 123 RHFISVP 129


>sp|G1PDH_CALMQ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Caldivirga maquilingensis (strain ATCC

Query: 4 RHLVSVP 10
+HL+S+P
Sbjct: 106 KHLISIP 112


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FPFRHLVSVP 10
P HL+++P
Sbjct: 223 LPKEHLIAIP 232




126|SequenceR|635|626|QLASSFPFRH

>sp|UPP_PYRAR|URACIL phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM

Query: 1 QLASSFPFRH 10
+L +FPFR+
Sbjct: 42 ELVKTFPFRY 51




127|SequenceR|640|631|VVSMRQLASS

***** No hits found ******


128|SequenceR|645|636|GPWAVVVSMR

>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 1 GPWAVVV 7
GPW VVV
Sbjct: 423 GPWRVVV 429


>sp|Y604_ARCFU|UNCHARACTERIZED protein AF_0604|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PWAVVVS 8
PWA VVS
Sbjct: 27 PWAKVVS 33


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GPWAVVVS 8
GPW +VV+
Sbjct: 298 GPWTIVVA 305




129|SequenceR|650|641|EPQTAGPWAV

>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 2 PQTAGPWAV 10
PQ+ GPW V
Sbjct: 419 PQSGGPWRV 427


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 1 EPQTAGPW 8
EP+ AG W
Sbjct: 338 EPRVAGTW 345


>sp|RLME_CENSY|RIBOSOMAL RNA large subunit methyltransferase|Cenarchaeum symbiosum (strain

Query: 2 PQTAGPWAV 10
PQ +G W+V
Sbjct: 114 PQVSGNWSV 122


>sp|GVPF_HALMT|GAS vesicle protein F|Haloferax mediterranei (strain ATCC 33500

Query: 3 QTAGPWA 9
Q GPWA
Sbjct: 190 QYTGPWA 196


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus (strain

Query: 1 EPQTAGPWAV 10
EP+TA P V
Sbjct: 305 EPETAAPGGV 314


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 QTAGPWAV 10
QTA PW +
Sbjct: 450 QTAAPWKL 457




130|SequenceR|655|646|GKVYAEPQTA

>sp|RS24_HALWD|SMALL ribosomal subunit protein eS24|Haloquadratum walsbyi (strain DSM

Query: 1 GKVYAEPQTA 10
KVY PQ+A
Sbjct: 68 AKVYDSPQSA 77


>sp|TRPB1_SULTO|TRYPTOPHAN synthase beta chain 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GKVYAEP 7
GKVYA P
Sbjct: 174 GKVYASP 180


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KVYAEPQ 8
KVY EP+
Sbjct: 688 KVYVEPE 694


>sp|Y1135_METHJ|UPF0179 protein Mhun_1135|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GKVYAEPQT 9
G VYA+P T
Sbjct: 12 GSVYAQPGT 20


>sp|MOAC_METLZ|PROBABLE cyclic pyranopterin monophosphate synthase|Methanocorpusculum

Query: 1 GKVYAEPQT 9
G++Y P+T
Sbjct: 32 GRIYLRPET 40


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 GKVYAEPQTA 10
G VY+EP A
Sbjct: 325 GIVYSEPSDA 334




131|SequenceR|660|651|VLEPSGKVYA

>sp|SYDND_HALWD|ASPARTATE--TRNA(ASP/ASN) ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LEPSGKVYA 10
L+PSGKV A
Sbjct: 104 LDPSGKVNA 112


>sp|SYY_METST|TYROSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LEPSGKVY 9
EPSGKV+
Sbjct: 38 FEPSGKVH 45


>sp|FLPA_THEAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermoplasma acidophilum (strain

Query: 2 LEPSGKVYA 10
+ PSG++YA
Sbjct: 97 IAPSGRIYA 105


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 VLEPSGKVY 9
+L P GKVY
Sbjct: 156 ILTPDGKVY 164


>sp|GSA_NITMS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 VLEPSGKVY 9
+L P GKVY
Sbjct: 280 LLSPGGKVY 288


>sp|SYY_METKA|TYROSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 LEPSGKVY 9
EPSGKV+
Sbjct: 39 FEPSGKVH 46


>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LEPSGKVY 9
LEP G++Y
Sbjct: 280 LEPRGEIY 287


>sp|SYDND_HALVO|ASPARTATE--TRNA(ASP/ASN) ligase|Haloferax volcanii (Halobacterium volcanii)

Query: 2 LEPSGKVYA 10
L+PSGKV A
Sbjct: 104 LDPSGKVDA 112


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VLEPSGKVYA 10
++EP KVYA
Sbjct: 328 IMEPVEKVYA 337


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VLEPSGKVYA 10
++EP KVYA
Sbjct: 328 IMEPVEKVYA 337


>sp|SYDND_HALMA|ASPARTATE--TRNA(ASP/ASN) ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LEPSGKVYA 10
L+PSGKV A
Sbjct: 104 LDPSGKVDA 112


>sp|HACA_METTH|PROBABLE methanogen homoaconitase large subunit|Methanothermobacter

Query: 3 EPSGKVYA 10
EP G VYA
Sbjct: 172 EPEGHVYA 179


>sp|SYY_METJA|TYROSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LEPSGKVY 9
EPSGK++
Sbjct: 35 FEPSGKIH 42


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VLEPSGKVYA 10
++EP KVYA
Sbjct: 328 IMEPVEKVYA 337


>sp|SYY_METAC|TYROSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 EPSGKVY 9
EPSGK++
Sbjct: 37 EPSGKIH 43


>sp|SYY_METBU|TYROSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 EPSGKVY 9
EPSGK++
Sbjct: 37 EPSGKIH 43


>sp|SYY_METMA|TYROSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 EPSGKVY 9
EPSGK++
Sbjct: 37 EPSGKIH 43


>sp|SYY_METBF|TYROSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 EPSGKVY 9
EPSGK++
Sbjct: 37 EPSGKIH 43


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 VLEPSGKVYA 10
VL P G+VY+
Sbjct: 158 VLTPEGEVYS 167


>sp|GSA_HYPBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Hyperthermus butylicus (strain DSM 5456

Query: 2 LEPSGKVY 9
L PSGKV+
Sbjct: 286 LTPSGKVF 293


>sp|SYY_METS3|TYROSINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 EPSGKVY 9
EPSGK++
Sbjct: 39 EPSGKIH 45


>sp|DNAK_PICTO|CHAPERONE protein DnaK|Picrophilus torridus (strain ATCC 700027

Query: 1 VLEPSGKVYA 10
+L P G VYA
Sbjct: 63 LLNPEGTVYA 72


>sp|AGL6_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl6|Haloferax volcanii

Query: 1 VLEPSGKVYA 10
V+EP GK Y
Sbjct: 100 VIEPDGKGYG 109


>sp|AAT_METJA|PROBABLE aspartate aminotransferase|Methanocaldococcus jannaschii (strain

Query: 4 PSGKVY 9
P+GKVY
Sbjct: 166 PTGKVY 171


>sp|SYY_METVS|TYROSINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LEPSGKVY 9
EPSGK++
Sbjct: 44 FEPSGKIH 51


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 PSGKVY 9
PSGK+Y
Sbjct: 285 PSGKIY 290


>sp|RSMA_METBU|PROBABLE ribosomal RNA small subunit|Methanococcoides burtonii (strain DSM

Query: 1 VLEPSGKVY 9
+LE +GKVY
Sbjct: 56 LLEKAGKVY 64


>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LEPSGKVYA 10
L+P+GKV A
Sbjct: 107 LDPTGKVKA 115


>sp|SYD_PYRHO|ASPARTATE--TRNA(ASP) ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LEPSGKVYA 10
L+P+GKV A
Sbjct: 107 LDPTGKVKA 115


>sp|GLMS_THEKO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Thermococcus kodakarensis (strain

Query: 2 LEPSGKVY 9
+ PSGKV+
Sbjct: 515 INPSGKVF 522


>sp|SYD_PYRFU|ASPARTATE--TRNA(ASP) ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LEPSGKVYA 10
L+P+GKV A
Sbjct: 107 LDPTGKVKA 115


>sp|GSA_PICTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Picrophilus torridus (strain ATCC 700027

Query: 1 VLEPSGKVY 9
++ PSG VY
Sbjct: 281 LISPSGNVY 289


>sp|SYD_PYRAB|ASPARTATE--TRNA(ASP) ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 LEPSGKVYA 10
L+P+GKV A
Sbjct: 107 LDPTGKVKA 115


>sp|SYDND_NATPD|ASPARTATE--TRNA(ASP/ASN) ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LEPSGKVYA 10
L+P+GKV A
Sbjct: 104 LDPTGKVDA 112


>sp|PSA_PYRAE|PROTEASOME subunit alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VLEPSGKVY 9
+ P GK+Y
Sbjct: 15 IFSPEGKIY 23


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 VLEPSGKV 8
VL+PSG++
Sbjct: 130 VLDPSGEI 137


>sp|DTDA_CENSY|D-AMINOACYL-TRNA deacylase|Cenarchaeum symbiosum (strain A)

Query: 2 LEPSGKVY 9
+EP GK++
Sbjct: 24 MEPDGKIW 31


>sp|PIMT_AERPE|PROTEIN-L-ISOASPARTATE O-methyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VLEPSGKVYA 10
++ P G+VYA
Sbjct: 129 LVTPGGRVYA 138


>sp|SYDND_METKA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 LEPSGKVYA 10
L+P+GKV A
Sbjct: 107 LDPTGKVDA 115


>sp|GSA_SULAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VLEPSGKVY 9
+L P+GKV+
Sbjct: 279 MLTPAGKVF 287


>sp|GSA_METBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VLEPSGKVY 9
++ PSG VY
Sbjct: 285 MISPSGSVY 293


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 VLEPSGKVYA 10
VLEP+ +YA
Sbjct: 318 VLEPNEALYA 327


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 VLEPSGKVY 9
+ E SGKVY
Sbjct: 227 IKEDSGKVY 235




132|SequenceR|665|656|NCLGAVLEPS

>sp|Y644_METJA|UNCHARACTERIZED protein MJ0644|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NCLGAVLEP 9
NC G ++EP
Sbjct: 147 NCCGVIVEP 155


>sp|Y2221_ARCFU|UNCHARACTERIZED protein AF_2221|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CLGAVLE 8
CLG VLE
Sbjct: 17 CLGVVLE 23


>sp|GATB_AERPE|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 2 CLGAVLE 8
C+G VLE
Sbjct: 109 CMGGVLE 115


>sp|COBS_PYRHO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NCLGAVLE 8
+C+GAV E
Sbjct: 207 DCIGAVAE 214


>sp|COBS_THEGJ|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 NCLGAVLE 8
+C+GAV E
Sbjct: 207 DCIGAVAE 214




133|SequenceR|670|661|PVTEPNCLGA

>sp|HPRT_METFV|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermus fervidus (strain ATCC

Query: 1 PVTEPNCL 8
P+TEPN L
Sbjct: 32 PLTEPNLL 39


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VTEPNCLG 9
V EP+CLG
Sbjct: 10 VDEPSCLG 17


>sp|HBCAL_NITMS|4-HYDROXYBUTYRATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 2 VTEPNCLG 9
V PNCLG
Sbjct: 125 VVGPNCLG 132


>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 5 PNCLG 9
PNCLG
Sbjct: 130 PNCLG 134


>sp|ASPG_THEKO|L-ASPARAGINASE kodakarensis (strain ATCC BAA-918

Query: 1 PVTEPN 6
P+TEPN
Sbjct: 114 PITEPN 119


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PNCLG 9
PNCLG
Sbjct: 125 PNCLG 129


>sp|PYRE_HALSA|OROTATE phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 3 TEPNCLGA 10
T+P CL A
Sbjct: 41 TDPECLSA 48


>sp|METK_METMI|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 PVTEPNCL 8
PVTEP L
Sbjct: 353 PVTEPKIL 360


>sp|RIBL_THESM|FAD synthase|Thermococcus sibiricus (strain DSM 12597

Query: 2 VTEPNCL 8
+ EPNC+
Sbjct: 76 IGEPNCI 82


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain

Query: 2 VTEPNC 7
VTEP+C
Sbjct: 69 VTEPSC 74


>sp|METK_METMP|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PVTEPNCL 8
PVTEP L
Sbjct: 353 PVTEPKIL 360


>sp|GLT_PYRHO|SODIUM-ASPARTATE symporter Glt(Ph)|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PVTEPNCLGA 10
P+T+PN A
Sbjct: 373 PLTDPNVAAA 382


>sp|HPCAL_NITMS|3-HYDROXYPROPIONATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 5 PNCLG 9
PNC+G
Sbjct: 375 PNCIG 379


>sp|METK_METVS|S-ADENOSYLMETHIONINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PVTEPNCL 8
P+TEP L
Sbjct: 352 PITEPKIL 359


>sp|METK_METM7|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 PVTEPNCL 8
P+TEP L
Sbjct: 353 PITEPKIL 360


>sp|METK_METM5|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 PVTEPNCL 8
P+TEP L
Sbjct: 353 PITEPKIL 360


>sp|DHAS_ARCFU|ASPARTATE-SEMIALDEHYDE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VTEPNC 7
VT PNC
Sbjct: 143 VTNPNC 148


>sp|METK_METM6|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 PVTEPNCL 8
P+TEP L
Sbjct: 353 PITEPKIL 360


>sp|DHAS_METTH|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 VTEPNC 7
VT PNC
Sbjct: 142 VTNPNC 147


>sp|DHAS_METJA|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VTEPNC 7
+T PNC
Sbjct: 152 ITNPNC 157




134|SequenceR|675|666|QAFDTPVTEP

>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 2 AFDTPVTE 9
AFDTP+ E
Sbjct: 67 AFDTPIRE 74


>sp|Y1316_THEGJ|PUTATIVE HTH-type transcriptional regulatory protein|Thermococcus

Query: 1 QAFDTPVTEP 10
+ FD P+ EP
Sbjct: 176 ELFDEPIAEP 185


>sp|BPSA_METJA|N(4)-BIS(AMINOPROPYL)SPERMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QAFDTPVTEP 10
+AFDT +T+P
Sbjct: 216 RAFDTFITDP 225


>sp|G1PDH_AERPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Aeropyrum pernix (strain ATCC 700893

Query: 1 QAFDTPVTEP 10
+ FD P++ P
Sbjct: 136 KGFDKPISRP 145


>sp|DNAG_METM7|DNA primase DnaG|Methanococcus maripaludis (strain C7 /

Query: 1 QAFDTPVTEP 10
+ +TPVTEP
Sbjct: 301 EKVETPVTEP 310


>sp|DNAG_METM6|DNA primase DnaG|Methanococcus maripaludis (strain C6 /

Query: 1 QAFDTPVTEP 10
+ +TPVTEP
Sbjct: 300 EKVETPVTEP 309


>sp|HIS6_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 1 QAFDTPVTE 9
Q FD P+T+
Sbjct: 180 QGFDIPLTK 188


>sp|UPP_HALSA|URACIL phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 AFDTPVTE 9
AF+TP+TE
Sbjct: 60 AFETPLTE 67


>sp|UPP_HALS3|URACIL phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 AFDTPVTE 9
AF+TP+TE
Sbjct: 60 AFETPLTE 67


>sp|Y2519_HALMA|PUTATIVE HTH-type transcriptional regulatory protein|Haloarcula marismortui

Query: 3 FDTPVTEP 10
FD P+T P
Sbjct: 178 FDAPLTSP 185


>sp|FLA3_PYRHO|PROBABLE flagellin PH0549|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AFDTPVT 8
+FDTPV+
Sbjct: 188 SFDTPVS 194




135|SequenceR|680|671|YSQLMQAFDT

>sp|RPO1C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Archaeoglobus fulgidus (strain ATCC

Query: 1 YSQLMQAFD 9
Y LM AFD
Sbjct: 200 YKALMAAFD 208


>sp|Y441_NANEQ|PROTEIN NEQ441|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 YSQLMQAFD 9
YS LM AF+
Sbjct: 66 YSALMAAFE 74




136|SequenceR|685|676|YGAATYSQLM

***** No hits found ******


137|SequenceR|690|681|LAVVRYGAAT

>sp|RRP41_PYRCJ|EXOSOME complex component Rrp41|Pyrobaculum calidifontis (strain DSM

Query: 2 AVVRYGAAT 10
AVV YGA T
Sbjct: 40 AVVSYGATT 48


>sp|CH60_METBF|CHAPERONIN GroEL|Methanosarcina barkeri (strain Fusaro /

Query: 1 LAVVRYGAAT 10
+AV++ GAAT
Sbjct: 375 VAVIKVGAAT 384


>sp|CH60_METAC|CHAPERONIN GroEL|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LAVVRYGAAT 10
+AV++ GAAT
Sbjct: 375 VAVIKVGAAT 384


>sp|CH60_METMA|CHAPERONIN GroEL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LAVVRYGAAT 10
+AV++ GAAT
Sbjct: 375 VAVIKVGAAT 384




138|SequenceR|695|686|LPKSALAVVR

>sp|METXA_METRM|HOMOSERINE O-acetyltransferase|Methanobrevibacter ruminantium (strain ATCC

Query: 2 PKSALAVVR 10
P+S LAV R
Sbjct: 214 PRSGLAVAR 222


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 2 PKSALAVVR 10
PK+ALA +R
Sbjct: 165 PKAALADIR 173


>sp|TRPD_SULTO|ANTHRANILATE phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LPKSALAVVR 10
LPK A AVVR
Sbjct: 198 LPKLAEAVVR 207


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LPKSALAVV 9
LP ALA+V
Sbjct: 298 LPNKALAIV 306


>sp|Y666_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0666|Methanocaldococcus

Query: 1 LPKSALAVV 9
LPK+A AVV
Sbjct: 105 LPKNANAVV 113


>sp|FLAH_METJA|ARCHAEAL flagellar ATP-binding protein FlaH|Methanocaldococcus jannaschii

Query: 1 LPKSALAVVR 10
LP+S L ++R
Sbjct: 168 LPESVLTIIR 177


>sp|FEN_PYRHO|FLAP endonuclease 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PKSALAVVR 10
PK AL +VR
Sbjct: 247 PKKALEIVR 255


>sp|HTPX2_METMA|PROTEASE HtpX homolog 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LPKSALAVVR 10
LPK +A+VR
Sbjct: 92 LPKPQVAIVR 101




139|SequenceR|700|691|SPVTPLPKSA

>sp|NEP1_THEAC|RIBOSOMAL RNA small subunit methyltransferase|Thermoplasma acidophilum

Query: 1 SPVTPLPKS 9
SP+T +PKS
Sbjct: 99 SPITRMPKS 107


>sp|NEP1_THEVO|RIBOSOMAL RNA small subunit methyltransferase|Thermoplasma volcanium (strain

Query: 1 SPVTPLPKS 9
SP+T +PKS
Sbjct: 99 SPITRMPKS 107


>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 1 SPVTPLPKS 9
+PVTPLP++
Sbjct: 254 APVTPLPRA 262


>sp|GSA_METBF|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PVTPLP 7
P+TPLP
Sbjct: 215 PITPLP 220


>sp|TRUA_METMJ|TRNA pseudouridine synthase A|Methanoculleus marisnigri (strain ATCC

Query: 2 PVTPLPKSA 10
P TPLP A
Sbjct: 227 PFTPLPIDA 235


>sp|RL37A_METS3|LARGE ribosomal subunit protein eL43|Methanobrevibacter smithii (strain

Query: 2 PVTPLPKSA 10
P TP+ KSA
Sbjct: 70 PETPMAKSA 78




140|SequenceR|705|696|QAAELSPVTP

>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 AAELSPVTP 10
AA L+PVTP
Sbjct: 488 AAGLTPVTP 496


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 5 LSPVTP 10
LSPVTP
Sbjct: 781 LSPVTP 786


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 LSPVTP 10
LSPVTP
Sbjct: 784 LSPVTP 789


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 5 LSPVTP 10
LSPVTP
Sbjct: 784 LSPVTP 789


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 5 LSPVTP 10
LSPVTP
Sbjct: 784 LSPVTP 789


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 AAELSPVTP 10
AA L+PVTP
Sbjct: 486 AAGLTPVTP 494


>sp|TRPF_NATPD|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QAAELSPVTP 10
QAAEL+ TP
Sbjct: 44 QAAELAAATP 53


>sp|RNFG_METAC|ION-TRANSLOCATING oxidoreductase complex subunit G|Methanosarcina acetivorans

Query: 1 QAAELSPVT 9
QAA+ PVT
Sbjct: 54 QAADFEPVT 62




141|SequenceR|710|701|DRTLQQAAEL

>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DRTLQQAAEL 10
DRTL+QAA +
Sbjct: 49 DRTLEQAANV 58


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 1 DRTLQQAAEL 10
DRTL+QAA +
Sbjct: 41 DRTLEQAANV 50


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DRTLQQAAEL 10
DRTL+QAA +
Sbjct: 43 DRTLEQAANV 52


>sp|IDI2_PYRFU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DRTLQQAAE 9
+RTL QAAE
Sbjct: 83 NRTLAQAAE 91


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DRTLQQAAEL 10
DRTL+QA +
Sbjct: 41 DRTLEQATNV 50


>sp|VHUA_METVO|F420-NON-REDUCING hydrogenase vhu subunit A|Methanococcus voltae

Query: 1 DRTLQQAAEL 10
++ +QQAAE+
Sbjct: 406 EKAIQQAAEV 415




142|SequenceR|715|706|DGEVTDRTLQ

>sp|CDC62_ARCFU|ORC1-TYPE DNA replication protein 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGEVTDRTLQ 10
D EV DR +Q
Sbjct: 365 DAEVVDRAMQ 374


>sp|TRPD_METKA|ANTHRANILATE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 DGEVTDR 7
DGEVTDR
Sbjct: 240 DGEVTDR 246


>sp|AGLC_METVO|DOLICHYL N-acetyl-alpha-D-glucosaminyl phosphate

Query: 1 DGEVTDRTL 9
DG+ TD+TL
Sbjct: 40 DGKSTDKTL 48


>sp|Y1572_METJA|PUTATIVE ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 EVTDRTLQ 10
EVTD+TL+
Sbjct: 122 EVTDKTLK 129


>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 1 DGEVTDRTL 9
DGEV ++TL
Sbjct: 187 DGEVLEKTL 195


>sp|PCCA_HALMT|PROPIONYL-COA carboxylase, biotin carboxylase and|Haloferax mediterranei (strain

Query: 1 DGEVTDRTL 9
+GEVT+RT
Sbjct: 467 EGEVTERTF 475


>sp|TFE_HALSA|TRANSCRIPTION factor E|Halobacterium salinarum (strain ATCC 700922

Query: 1 DGEVTDRTL 9
DGEVTD L
Sbjct: 33 DGEVTDEEL 41


>sp|FAU1_HALSA|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 700922

Query: 2 GEVTDRTLQ 10
GEVTDR+ +
Sbjct: 339 GEVTDRSAE 347


>sp|FAU1_HALS3|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 29341

Query: 2 GEVTDRTLQ 10
GEVTDR+ +
Sbjct: 339 GEVTDRSAE 347


>sp|GLMS_SULAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfolobus acidocaldarius (strain

Query: 1 DGEVTD 6
DGE+TD
Sbjct: 509 DGEITD 514


>sp|GCST_HALMA|PROBABLE aminomethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DGEVTDRTLQ 10
DGE+T+R L
Sbjct: 121 DGEMTERWLS 130


>sp|HCY_NATPH|HALOCYANIN pharaonis (Natronobacterium pharaonis)

Query: 1 DGEVTDRTLQ 10
DG++TD T Q
Sbjct: 61 DGDITDETGQ 70


>sp|PUR5_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GEVTDR 7
GEVTDR
Sbjct: 317 GEVTDR 322


>sp|ACDE_METKA|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanopyrus

Query: 3 EVTDRTLQ 10
+VTDR LQ
Sbjct: 108 DVTDRVLQ 115


>sp|TFE_HALMA|TRANSCRIPTION factor E|Haloarcula marismortui (strain ATCC 43049

Query: 1 DGEVTD 6
DGEVTD
Sbjct: 33 DGEVTD 38


>sp|TFE_HALWD|TRANSCRIPTION factor E|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DGEVTD 6
DGEVTD
Sbjct: 33 DGEVTD 38


>sp|FAU1_NATPD|PROBABLE ribonuclease FAU-1|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GEVTDR 7
GEVTDR
Sbjct: 331 GEVTDR 336




143|SequenceR|720|711|GLLSLDGEVT

>sp|MCRAM_METJA|[METHYL coenzyme M reductase]-L-arginine

Query: 3 LSLDGEVT 10
L+LDGEV+
Sbjct: 377 LTLDGEVS 384


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GLLSLDGEV 9
GLL+LDG++
Sbjct: 172 GLLNLDGDL 180


>sp|Y2221_ARCFU|UNCHARACTERIZED protein AF_2221|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LLSLDGEVT 10
L S DGEVT
Sbjct: 152 LDSFDGEVT 160


>sp|RRP41_THEVO|EXOSOME complex component Rrp41|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LLSLDGEVT 10
LL +DG+VT
Sbjct: 201 LLQMDGDVT 209


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 2 LLSLDGEVT 10
LL L+GE+T
Sbjct: 178 LLKLEGELT 186


>sp|HEM3_METBF|PROBABLE porphobilinogen deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LLSLDGEVT 10
+LSLDGE T
Sbjct: 257 VLSLDGEET 265


>sp|RRP42_PYRAE|EXOSOME complex component Rrp42|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 LSLDGEVT 10
LSLDG +T
Sbjct: 221 LSLDGRIT 228


>sp|RRP41_THEAC|EXOSOME complex component Rrp41|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LLSLDGEVT 10
L+ +DG+VT
Sbjct: 201 LMQMDGDVT 209


>sp|KDGA_SULAC|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LLSLDGEV 9
LLSLDG V
Sbjct: 186 LLSLDGVV 193


>sp|BIOF_METJA|PUTATIVE 8-amino-7-oxononanoate synthase|Methanocaldococcus jannaschii

Query: 1 GLLSLDGEV 9
G+ S+DG++
Sbjct: 164 GVFSMDGDI 172




144|SequenceR|725|716|RMVLLGLLSL

>sp|GLKA_PYRAB|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 RMVLLGLLSL 10
R +LGLLSL
Sbjct: 274 RREILGLLSL 283




145|SequenceR|730|721|PKLLNRMVLL

>sp|CHED_METMP|PROBABLE chemoreceptor glutamine deamidase CheD|Methanococcus maripaludis

Query: 1 PKLLNRMVLL 10
P+L+NRM L
Sbjct: 66 PELINRMAKL 75


>sp|GLCD3_SACS2|GLUCOSE 1-dehydrogenase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PKLLNRMV 8
P +LNRM+
Sbjct: 325 PSVLNRMI 332




146|SequenceR|735|726|VPTTQPKLLN

>sp|METK_METMI|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (Methanococcus deltae)

Query: 2 PTTQPKLLN 10
P T+PK+L+
Sbjct: 353 PVTEPKILD 361


>sp|Y1757_ARCFU|UNCHARACTERIZED protein AF_1757|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PTTQPKLL 9
P+T+P+LL
Sbjct: 33 PSTEPELL 40


>sp|METK_PYRNV|S-ADENOSYLMETHIONINE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PTTQPKLLN 10
P +PK+LN
Sbjct: 351 PINEPKILN 359


>sp|METK_PYRCJ|S-ADENOSYLMETHIONINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PTTQPKLLN 10
P +PK+LN
Sbjct: 351 PINEPKILN 359


>sp|METK_METMP|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 PTTQPKLLN 10
P T+PK+L+
Sbjct: 353 PVTEPKILD 361


>sp|METK_PYRAE|S-ADENOSYLMETHIONINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PTTQPKLLN 10
P +PK+LN
Sbjct: 351 PINEPKILN 359


>sp|HPRT_METJA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 VPTTQPKLL 9
VP +PKLL
Sbjct: 29 VPVVEPKLL 37


>sp|METK_PYRIL|S-ADENOSYLMETHIONINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PTTQPKLLN 10
P +PK+LN
Sbjct: 351 PINEPKILN 359


>sp|METK_METM6|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C6 /

Query: 2 PTTQPKLLN 10
P T+PK+L+
Sbjct: 353 PITEPKILD 361


>sp|METK_METM7|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 PTTQPKLLN 10
P T+PK+L+
Sbjct: 353 PITEPKILD 361


>sp|METK_METM5|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 PTTQPKLLN 10
P T+PK+L+
Sbjct: 353 PITEPKILD 361


>sp|HPRT_METTH|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 1 VPTTQPKLL 9
+P T+P+LL
Sbjct: 31 IPLTEPELL 39


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPTTQPKL 8
+PTT PK+
Sbjct: 944 LPTTSPKI 951


>sp|HPRT_METTM|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermobacter marburgensis

Query: 1 VPTTQPKLL 9
+P T+P+LL
Sbjct: 31 IPLTEPELL 39


>sp|HPRT_METMS|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanohalophilus mahii (strain ATCC

Query: 1 VPTTQPKLLN 10
VP PKLL+
Sbjct: 31 VPAIDPKLLD 40


>sp|HPRT_METTP|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothrix thermoacetophila (strain

Query: 1 VPTTQPKLL 9
VP T+P+L+
Sbjct: 31 VPETRPELI 39


>sp|METK_METVS|S-ADENOSYLMETHIONINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PTTQPKLLN 10
P T+PK+L+
Sbjct: 352 PITEPKILS 360


>sp|HPRT_METFA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocaldococcus fervens (strain DSM

Query: 1 VPTTQPKLL 9
VP PKLL
Sbjct: 29 VPVVDPKLL 37


>sp|HPRT_METFV|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermus fervidus (strain ATCC

Query: 1 VPTTQPKLL 9
+P T+P LL
Sbjct: 31 IPLTEPNLL 39


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VPTTQPKLL 9
V TT+P+LL
Sbjct: 201 VATTRPELL 209


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VPTTQPKLL 9
V TT+P+LL
Sbjct: 223 VATTRPELL 231




147|SequenceR|740|731|RLAQIVPTTQ

>sp|G3P_METHJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LAQIVPTTQ 10
+A IVPTTQ
Sbjct: 210 MAMIVPTTQ 218


>sp|Y864_ARCFU|UNCHARACTERIZED protein AF_0864|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LAQIVPTTQ 10
LAQ+ TTQ
Sbjct: 32 LAQVASTTQ 40


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 RLAQIVPTT 9
R+A+++P T
Sbjct: 366 RIAEVIPRT 374




148|SequenceR|745|736|RIRTRRLAQI

>sp|PUS10_THEAC|TRNA pseudouridine synthase Pus10|Thermoplasma acidophilum (strain ATCC

Query: 2 IRTRRLAQI 10
+RTRR+ Q+
Sbjct: 321 VRTRRIDQV 329




149|SequenceR|750|741|TVMVARIRTR

***** No hits found ******


150|SequenceR|755|746|QLNDGTVMVA

>sp|PIMT_PYRAE|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QLNDGTVMV 9
QL DG VMV
Sbjct: 162 QLKDGGVMV 170


>sp|PIMT_PYRAR|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 QLNDGTVMV 9
QL DG +MV
Sbjct: 162 QLKDGGIMV 170


>sp|GCSH_THEKO|PROBABLE glycine cleavage system H|Thermococcus kodakarensis (strain ATCC

Query: 2 LNDGTVMVA 10
L+DGTV+V
Sbjct: 25 LDDGTVLVG 33


>sp|RS4E_METAR|SMALL ribosomal subunit protein eS4|Methanocella arvoryzae (strain DSM

Query: 2 LNDGTVMVA 10
L+DGT M+A
Sbjct: 136 LHDGTTMIA 144


>sp|GCSH_THEGJ|PROBABLE glycine cleavage system H|Thermococcus gammatolerans (strain DSM

Query: 2 LNDGTVMVA 10
L+DGTV+V
Sbjct: 25 LDDGTVLVG 33


>sp|PYRC_METMA|DIHYDROOROTASE mazei (strain ATCC BAA-159

Query: 2 LNDGTV-MVA 10
LNDGT+ MVA
Sbjct: 302 LNDGTIDMVA 311


>sp|PYRC_METAC|DIHYDROOROTASE acetivorans (strain ATCC 35395

Query: 2 LNDGTV-MVA 10
LNDGT+ MVA
Sbjct: 302 LNDGTIDMVA 311


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 1 QLNDGTVM 8
+LNDG+V+
Sbjct: 397 KLNDGSVL 404


>sp|GCSH_PYRHO|PROBABLE glycine cleavage system H|Pyrococcus horikoshii (strain ATCC

Query: 2 LNDGTVMVA 10
L DGTV+V
Sbjct: 25 LEDGTVLVG 33


>sp|GCSH_PYRFU|PROBABLE glycine cleavage system H|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LNDGTVMVA 10
L DGTV+V
Sbjct: 25 LEDGTVLVG 33


>sp|GCSH_PYRAB|PROBABLE glycine cleavage system H|Pyrococcus abyssi (strain GE5 /

Query: 2 LNDGTVMVA 10
L DGTV+V
Sbjct: 25 LEDGTVLVG 33


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus (strain

Query: 2 LNDGTVMV 9
+ DGT+MV
Sbjct: 128 ITDGTIMV 135


>sp|RL31_PYRCJ|LARGE ribosomal subunit protein eL31|Pyrobaculum calidifontis (strain

Query: 1 QLNDGTVMV 9
+L+DGTV V
Sbjct: 79 KLDDGTVRV 87


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QLNDGTVM 8
+LNDGT++
Sbjct: 335 RLNDGTLI 342


>sp|PSB1_SULTO|PROTEASOME subunit beta 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QLNDGTVMVA 10
+LNDG ++ A
Sbjct: 12 KLNDGIILAA 21


>sp|CHEB2_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina

Query: 1 QLNDGTVMVA 10
++ DGTV++A
Sbjct: 229 RVEDGTVLIA 238


>sp|RL31_PYRAR|LARGE ribosomal subunit protein eL31|Pyrobaculum arsenaticum (strain

Query: 1 QLNDGTVMV 9
+L+DGTV V
Sbjct: 79 KLSDGTVKV 87




151|SequenceR|760|751|VTVATQLNDG

>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 TVATQLNDG 10
TVAT +N+G
Sbjct: 309 TVATTINNG 317




152|SequenceR|765|756|GCGRAVTVAT

>sp|RS5_HALSA|SMALL ribosomal subunit protein uS5|Halobacterium salinarum (strain ATCC

Query: 1 GCGRAVTVA 9
GCGR TVA
Sbjct: 121 GCGRPHTVA 129


>sp|RS5_HALMA|SMALL ribosomal subunit protein uS5|Haloarcula marismortui (strain ATCC

Query: 1 GCGRAVTVA 9
GCGR TVA
Sbjct: 121 GCGRPHTVA 129


>sp|RL30E_METS3|LARGE ribosomal subunit protein eL30|Methanobrevibacter smithii (strain

Query: 2 CGRAVTVAT 10
CG+ TVAT
Sbjct: 75 CGKPFTVAT 83


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 4 RAVTVAT 10
RAVT+AT
Sbjct: 341 RAVTIAT 347


>sp|OFOB2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Aeropyrum pernix (strain ATCC

Query: 3 GRAVTVAT 10
GRA+ VAT
Sbjct: 69 GRAIPVAT 76




153|SequenceR|770|761|QPAVMGCGRA

>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QPAVMGCG 8
QPAV+ CG
Sbjct: 10 QPAVVTCG 17


>sp|PHP_SACS2|ARYLDIALKYLPHOSPHATASE solfataricus (strain ATCC 35092

Query: 2 PAVMGCGR 9
P VMG GR
Sbjct: 67 PTVMGLGR 74


>sp|ISCS1_ARCFU|CYSTEINE desulfurase IscS 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PAVMGCGRA 10
PA++G G+A
Sbjct: 238 PAIVGFGKA 246


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 2 PAVMGCGRA 10
PA++G G A
Sbjct: 458 PAIVGTGNA 466


>sp|RS5_THEVO|SMALL ribosomal subunit protein uS5|Thermoplasma volcanium (strain ATCC

Query: 6 GCGRA 10
GCGRA
Sbjct: 119 GCGRA 123




154|SequenceR|775|766|IILHEQPAVM

>sp|FPOL_METMA|F(420)H(2) dehydrogenase subunit L|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 HEQPAVM 10
HE PA+M
Sbjct: 480 HESPAIM 486


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ILHEQPA 8
I+HE PA
Sbjct: 597 IIHEDPA 603




155|SequenceR|780|771|HTAHVIILHE

>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 HVIILH 9
HVIILH
Sbjct: 483 HVIILH 488


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HTAHVIILH 9
H H I LH
Sbjct: 209 HETHAIFLH 217


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 AHVIILHE 10
AH I+ HE
Sbjct: 196 AHEIVFHE 203


>sp|ARLY_METJA|ARGININOSUCCINATE lyase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 AHVIILHE 10
AHVI+L+E
Sbjct: 40 AHVIMLYE 47


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 HTAHVIILHE 10
+T+HVII E
Sbjct: 929 NTSHVIISEE 938


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 HTAHVIILHE 10
+T+HVII E
Sbjct: 929 NTSHVIISEE 938


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 TAHVIILH 9
T H IILH
Sbjct: 460 TIHPIILH 467


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 HTAHVIILH 9
HTA I+LH
Sbjct: 608 HTATHILLH 616


>sp|Y3100_HALMA|PUTATIVE heme-binding protein rrnAC3100|Haloarcula marismortui (strain

Query: 1 HTAHVIILH 9
H A ++ILH
Sbjct: 68 HKADIMILH 76


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HTAHVIILH 9
HTA I+LH
Sbjct: 611 HTATHILLH 619




156|SequenceR|785|776|QGREPHTAHV

>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 4 EPHTAH 9
EPHTAH
Sbjct: 469 EPHTAH 474


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 4 EPHTAH 9
EPHTAH
Sbjct: 459 EPHTAH 464


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 4 EPHTAH 9
EPHTAH
Sbjct: 465 EPHTAH 470


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 4 EPHTAH 9
EPHTAH
Sbjct: 462 EPHTAH 467


>sp|CDC6B_HALMA|ORC1-TYPE DNA replication protein 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 QGREPHTA 8
QGREP TA
Sbjct: 332 QGREPRTA 339


>sp|TTRB_ARCFU|TETRATHIONATE reductase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GREPHTAHV 10
G EPHT +V
Sbjct: 193 GNEPHTYYV 201


>sp|FAEHP_METTP|BIFUNCTIONAL enzyme Fae/Hps|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GREPHTAHV 10
G+EP AH+
Sbjct: 10 GKEPEVAHI 18


>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 EPHTAHV 10
E HTAHV
Sbjct: 156 EAHTAHV 162


>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 EPHTAH 9
EPHTAH
Sbjct: 465 EPHTAH 470


>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QGREPHT 7
+GREP+T
Sbjct: 133 KGREPYT 139


>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 5 PHTAHV 10
PHT HV
Sbjct: 393 PHTPHV 398


>sp|ARLMC_PYRFU|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus furiosus

Query: 5 PHTAHV 10
PHT HV
Sbjct: 394 PHTPHV 399


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi (strain

Query: 5 PHTAHV 10
PHT HV
Sbjct: 396 PHTPHV 401


>sp|RS8E_METBU|SMALL ribosomal subunit protein eS8|Methanococcoides burtonii (strain

Query: 2 GREPHTAHV 10
GREP HV
Sbjct: 28 GREPAATHV 36


>sp|SYP_METVS|PROLINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 REPHTAH 9
+E HTAH
Sbjct: 151 KEAHTAH 157


>sp|SYP_METM6|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 REPHTAH 9
+E HTAH
Sbjct: 151 KEAHTAH 157


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 REPHTAH 9
+E HTAH
Sbjct: 151 KEAHTAH 157


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 REPHTAH 9
+E HTAH
Sbjct: 151 KEAHTAH 157


>sp|PANE_PYRAB|2-DEHYDROPANTOATE 2-reductase|Pyrococcus abyssi (strain GE5 /

Query: 2 GREPHTAHV 10
GR+PH + +
Sbjct: 30 GRDPHVSAI 38


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 REPHTAH 9
+E HTAH
Sbjct: 151 KEAHTAH 157


>sp|SYP_METJA|PROLINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 REPHTAH 9
+E HTAH
Sbjct: 151 KEAHTAH 157


>sp|Y703_ARCFU|UNCHARACTERIZED protein AF_0703|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GREPH 6
GREPH
Sbjct: 68 GREPH 72


>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 5 PHTAHV 10
PHT H+
Sbjct: 396 PHTPHI 401


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 5 PHTAHV 10
PHT H+
Sbjct: 398 PHTPHI 403


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EPHTAHV 10
+PHTA++
Sbjct: 262 KPHTAYI 268


>sp|SYP_METS3|PROLINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 REPHTAH 9
+E HTAH
Sbjct: 152 KEAHTAH 158


>sp|GPMI_HALSA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Halobacterium salinarum (strain ATCC 700922

Query: 4 EPHTAH 9
+PHTAH
Sbjct: 451 DPHTAH 456


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 REPHTAH 9
+E HTAH
Sbjct: 161 KEAHTAH 167


>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 REPHTAH 9
+E HTAH
Sbjct: 152 KEAHTAH 158


>sp|GPMI_HALMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Haloarcula marismortui (strain ATCC 43049

Query: 4 EPHTAHV 10
+PHTAH
Sbjct: 461 DPHTAHT 467


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 REPHTAH 9
+E HTAH
Sbjct: 158 KEAHTAH 164


>sp|SYP_CALMQ|PROLINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 REPHTAH 9
+E HTAH
Sbjct: 162 KEAHTAH 168


>sp|RTCA_CALMQ|RNA 3'-terminal phosphate cyclase|Caldivirga maquilingensis (strain

Query: 1 QGREPH 6
QG++PH
Sbjct: 230 QGKDPH 235


>sp|RS8E_METJA|SMALL ribosomal subunit protein eS8|Methanocaldococcus jannaschii

Query: 2 GREPHTAHV 10
GREP HV
Sbjct: 29 GREPIETHV 37


>sp|SYP_PYRNV|PROLINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 REPHTAHV 10
+E HT HV
Sbjct: 164 KEAHTVHV 171


>sp|CDC6Q_HALMA|ORC1-TYPE DNA replication protein 17|Haloarcula marismortui (strain ATCC

Query: 2 GREPHTAHV 10
G PH+ HV
Sbjct: 308 GLPPHSKHV 316




157|SequenceR|790|781|ELSAPQGREP

>sp|ADEC_METB6|ADENINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 ELSAPQGREP 10
E +APQ R P
Sbjct: 349 EYAAPQARPP 358


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 5 PQGREP 10
PQGR+P
Sbjct: 45 PQGRDP 50


>sp|RL4_PYRAB|LARGE ribosomal subunit protein uL4|Pyrococcus abyssi (strain GE5 /

Query: 5 PQGREP 10
PQGR+P
Sbjct: 45 PQGRDP 50


>sp|RL4_PYRFU|LARGE ribosomal subunit protein uL4|Pyrococcus furiosus (strain ATCC

Query: 5 PQGREP 10
PQGR+P
Sbjct: 45 PQGRDP 50


>sp|RL4_THEON|LARGE ribosomal subunit protein uL4|Thermococcus onnurineus (strain

Query: 5 PQGREP 10
PQGR+P
Sbjct: 45 PQGRDP 50


>sp|RL4_PYRHO|LARGE ribosomal subunit protein uL4|Pyrococcus horikoshii (strain ATCC

Query: 5 PQGREP 10
PQGR+P
Sbjct: 45 PQGRDP 50




158|SequenceR|795|786|EMPLFELSAP

>sp|PGP_THEVO|PHOSPHOGLYCOLATE phosphatase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EMPLFEL 7
+MP+FEL
Sbjct: 178 DMPMFEL 184


>sp|HMAT_HALSA|HEME-BASED aerotactic transducer HemAT|Halobacterium salinarum (strain ATCC

Query: 1 EMPLFELSA 9
E PLFE +A
Sbjct: 53 EQPLFEATA 61


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PLFELSAP 10
PL++LS P
Sbjct: 927 PLYQLSVP 934


>sp|AROD_METTH|3-DEHYDROQUINATE dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 MPLFELSAP 10
+P+FE +AP
Sbjct: 7 VPVFEKTAP 15




159|SequenceR|800|791|VATPSEMPLF

>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 TPSEMPLF 10
T SE+PLF
Sbjct: 42 TKSELPLF 49


>sp|COFC_METTH|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 VATPSEMPLF 10
+ TPS++PL
Sbjct: 98 IITPSDIPLI 107


>sp|UBIX_THEAC|FLAVIN prenyltransferase UbiX|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VATPSEMPL 9
+ P EMPL
Sbjct: 115 IVVPREMPL 123


>sp|DGGGP_METBF|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 TPSEMPLF 10
+P E PLF
Sbjct: 44 SPGEFPLF 51


>sp|SYW_PYRHO|TRYPTOPHAN--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 TPSEMPLF 10
T SE+P+F
Sbjct: 42 TKSELPIF 49


>sp|SYW_PYRFU|TRYPTOPHAN--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TPSEMPLF 10
T SE+P+F
Sbjct: 42 TKSELPIF 49


>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 1 VATPSEMP 8
VA+PS++P
Sbjct: 182 VASPSDLP 189




160|SequenceR|805|796|DKVGNVATPS

>sp|HFLX_METJA|GTPASE HflX|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VGNVATPS 10
VGN+ TPS
Sbjct: 66 VGNILTPS 73


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 1 DKVGNVAT 8
D VGNVAT
Sbjct: 634 DMVGNVAT 641


>sp|FLAB3_METVS|FLAGELLIN B3|Methanococcus vannielii (strain ATCC 35089

Query: 1 DKVGNVATP 9
DK+G + TP
Sbjct: 77 DKIGAIVTP 85


>sp|PPAC_ARCFU|PROBABLE manganese-dependent inorganic pyrophosphatase|Archaeoglobus

Query: 2 KVGNVATPS 10
K+G+V TP
Sbjct: 110 KIGDVTTPQ 118


>sp|LYSK_PYRAB|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus abyssi

Query: 1 DKVGNV 6
DKVGNV
Sbjct: 46 DKVGNV 51


>sp|RSMA_METBF|PROBABLE ribosomal RNA small subunit|Methanosarcina barkeri (strain Fusaro

Query: 1 DKVGNV 6
DKVGN+
Sbjct: 91 DKVGNI 96




161|SequenceR|810|801|AAQDPDKVGN

>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 2 AQDPDKVGN 10
A DP+++GN
Sbjct: 260 AADPEEIGN 268


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 3 QDPDKVG 9
QDPDK+G
Sbjct: 315 QDPDKLG 321


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 AQDPDKVG 9
A DPDK+
Sbjct: 735 ANDPDKIA 742


>sp|Y887_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 AQDPDKVGN 10
+DP+K GN
Sbjct: 29 GKDPEKTGN 37


>sp|Y433_METTH|UPF0201 protein MTH_433|Methanothermobacter thermautotrophicus (strain

Query: 1 AAQDPDKVG 9
A +DP+KVG
Sbjct: 12 ATEDPEKVG 20


>sp|RPO10_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrococcus horikoshii (strain ATCC

Query: 1 AAQDPDKV 8
A +DP+KV
Sbjct: 27 AGEDPEKV 34


>sp|RPO10_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrococcus furiosus (strain ATCC

Query: 1 AAQDPDKV 8
A +DP+KV
Sbjct: 27 AGEDPEKV 34


>sp|RPO10_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrococcus abyssi (strain GE5 /

Query: 1 AAQDPDKV 8
A +DP+KV
Sbjct: 27 AGEDPEKV 34


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 AQDPDK 7
A+DPDK
Sbjct: 152 AEDPDK 157


>sp|AATK_METJA|A-TYPE ATP synthase subunit K|Methanocaldococcus jannaschii (strain ATCC

Query: 2 AQDPDKVG 9
A+DP+K G
Sbjct: 39 AEDPNKFG 46


>sp|RS3A_PYRHO|SMALL ribosomal subunit protein eS1|Pyrococcus horikoshii (strain ATCC

Query: 2 AQDPDKVGN 10
A DP+KV N
Sbjct: 39 ADDPEKVMN 47


>sp|RNABP_PYRAB|RNA-BINDING protein PAB1135|Pyrococcus abyssi (strain GE5 /

Query: 1 AAQDPDKV 8
A +DP+KV
Sbjct: 18 ATEDPEKV 25


>sp|RS3A_PYRFU|SMALL ribosomal subunit protein eS1|Pyrococcus furiosus (strain ATCC

Query: 2 AQDPDKVGN 10
A DP+KV N
Sbjct: 37 ADDPEKVLN 45


>sp|END4_METPE|PROBABLE endonuclease 4|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 AAQDPDKVG 9
+ DPD++G
Sbjct: 168 SCSDPDRIG 176


>sp|RS3A_PYRAB|SMALL ribosomal subunit protein eS1|Pyrococcus abyssi (strain GE5 /

Query: 2 AQDPDKVGN 10
A DP+KV N
Sbjct: 38 ADDPEKVLN 46


>sp|RS3A_HALMA|SMALL ribosomal subunit protein eS1|Haloarcula marismortui (strain ATCC

Query: 2 AQDPDKV 8
A++PDKV
Sbjct: 34 AEEPDKV 40


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 DPDKVG 9
+PDKVG
Sbjct: 95 EPDKVG 100




162|SequenceR|815|806|EVTYSAAQDP

>sp|AMASY_HALMA|APPARENT malate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EVTYSAAQDP 10
E TY AAQ P
Sbjct: 391 EATYQAAQTP 400


>sp|HTPX_PYRIL|PROTEASE HtpX homolog|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VTYSAAQDP 10
VTY A DP
Sbjct: 103 VTYGARPDP 111


>sp|FEN_METLZ|FLAP endonuclease 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 EVTYSAAQD 9
+VTY+ +QD
Sbjct: 166 DVTYAVSQD 174


>sp|FEN_METMJ|FLAP endonuclease 1|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EVTYSAAQD 9
+VTY+ +QD
Sbjct: 166 KVTYAVSQD 174




163|SequenceR|820|811|SRPDPEVTYS

>sp|ASRAC_PYRHO|ALANINE/SERINE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RPDPEVT 8
RPDPE+T
Sbjct: 404 RPDPEMT 410


>sp|PYRF_HALLT|OROTIDINE 5'-phosphate decarboxylase|Halorubrum lacusprofundi (strain ATCC

Query: 1 SRPDPEVTY 9
SRPD E TY
Sbjct: 249 SRPDDEATY 257


>sp|PUR5_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 RPDPEVT 8
RPDPEV
Sbjct: 105 RPDPEVA 111


>sp|Y1691_METAC|UPF0210 protein MA_1691|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SRPDPEV 7
S PDPEV
Sbjct: 46 SHPDPEV 52


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RPDPEV 7
RPDPEV
Sbjct: 73 RPDPEV 78


>sp|QUEC1_SULTO|7-CYANO-7-DEAZAGUANINE synthase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 DPEVTYS 10
DP +TYS
Sbjct: 159 DPSLTYS 165


>sp|RL18_METAC|LARGE ribosomal subunit protein uL18|Methanosarcina acetivorans (strain

Query: 3 PDPEVTYS 10
PD ++TYS
Sbjct: 53 PDGDITYS 60


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 2 RPDPEV 7
RPDP+V
Sbjct: 70 RPDPDV 75


>sp|SYD_PYRHO|ASPARTATE--TRNA(ASP) ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RPDPEVTY 9
RP P +TY
Sbjct: 278 RPFPRITY 285


>sp|TPIS_METBR|TRIOSEPHOSPHATE isomerase|Methanobacterium bryantii

Query: 1 SRPDPEV 7
S+P+PE+
Sbjct: 157 SKPEPEI 163


>sp|GLCDH_HALSA|GLUCOSE 1-dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SRPDPEV 7
SRPDP +
Sbjct: 207 SRPDPTI 213


>sp|VHUG_METJA|F420-NON-REDUCING hydrogenase vhu subunit G|Methanocaldococcus jannaschii (strain

Query: 2 RPDPE 6
RPDPE
Sbjct: 201 RPDPE 205




164|SequenceR|825|816|LALHRSRPDP

>sp|COBS_THEAC|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LALHRSRP 8
+ LHRSRP
Sbjct: 142 ITLHRSRP 149


>sp|RADB_METBU|DNA repair and recombination protein|Methanococcoides burtonii (strain

Query: 4 HRSRPD 9
HRSRP+
Sbjct: 206 HRSRPE 211


>sp|MRE11_PYRFU|DNA double-strand break repair protein|Pyrococcus furiosus (strain

Query: 3 LHRSRPDP 10
H SRP P
Sbjct: 51 FHSSRPSP 58


>sp|RADB_METMJ|DNA repair and recombination protein|Methanoculleus marisnigri (strain

Query: 4 HRSRPD 9
HRSRP+
Sbjct: 203 HRSRPE 208


>sp|GLCDH_HALSA|GLUCOSE 1-dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 5 RSRPDP 10
RSRPDP
Sbjct: 206 RSRPDP 211


>sp|PGK_THEKO|PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LALHRSRP 8
+A H+SRP
Sbjct: 54 IATHQSRP 61




165|SequenceR|830|821|FTPGSLALHR

>sp|CDPAS_HYPBU|CDP-ARCHAEOL synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 FTPGSLALHR 10
FTP +ALHR
Sbjct: 143 FTPIVIALHR 152


>sp|HPRL2_HALWD|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PGSLALHR 10
PG +ALH+
Sbjct: 89 PGEVALHK 96


>sp|HPRL2_HALWC|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16854

Query: 3 PGSLALHR 10
PG +ALH+
Sbjct: 89 PGEVALHK 96


>sp|Y1428_PYRHO|UPF0091 protein PH1428|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GSLALHR 10
GS+ALHR
Sbjct: 20 GSIALHR 26


>sp|DADD_METBU|5'-DEOXYADENOSINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FTPGSLALH 9
F PG LA H
Sbjct: 240 FGPGVLAAH 248


>sp|Y1495_METJA|UNCHARACTERIZED protein MJ1495|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TPGSLAL 8
TPG LAL
Sbjct: 107 TPGGLAL 113


>sp|RL3_SULAC|LARGE ribosomal subunit protein uL3|Sulfolobus acidocaldarius (strain

Query: 3 PGSLALHR 10
PG L HR
Sbjct: 258 PGQLGFHR 265


>sp|RL3_SACI3|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 3 PGSLALHR 10
PG L HR
Sbjct: 267 PGQLGFHR 274


>sp|RL3_SACS2|LARGE ribosomal subunit protein uL3|Saccharolobus solfataricus (strain

Query: 3 PGSLALHR 10
PG L HR
Sbjct: 267 PGQLGFHR 274


>sp|RL3_SACI7|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 3 PGSLALHR 10
PG L HR
Sbjct: 267 PGQLGFHR 274


>sp|RL3_SACI2|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 3 PGSLALHR 10
PG L HR
Sbjct: 267 PGQLGFHR 274


>sp|RL3_SACI1|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 3 PGSLALHR 10
PG L HR
Sbjct: 267 PGQLGFHR 274


>sp|RL3_SACI6|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 3 PGSLALHR 10
PG L HR
Sbjct: 267 PGQLGFHR 274


>sp|RL3_SACI4|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 3 PGSLALHR 10
PG L HR
Sbjct: 267 PGQLGFHR 274


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 TPGSLALH 9
TP LALH
Sbjct: 479 TPAFLALH 486




166|SequenceR|835|826|KVIIGFTPGS

>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IIGFTPGS 10
I+GFTP S
Sbjct: 241 ILGFTPNS 248


>sp|ILVC_METHJ|KETOL-ACID reductoisomerase (NADP(+))|Methanospirillum hungatei JF-1 (strain

Query: 1 KVIIGFTPG 9
KVIIG PG
Sbjct: 42 KVIIGLRPG 50


>sp|RS12_NANEQ|SMALL ribosomal subunit protein uS12|Nanoarchaeum equitans (strain

Query: 1 KVIIGFTPG 9
KV+ FTPG
Sbjct: 78 KVVTAFTPG 86


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 IIGFTPGS 10
++GF PGS
Sbjct: 302 LVGFKPGS 309


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 IIGFTP 8
IIGFTP
Sbjct: 968 IIGFTP 973


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KVIIGFTP 8
K+++GF+P
Sbjct: 403 KIVVGFSP 410


>sp|RS12_THEKO|SMALL ribosomal subunit protein uS12|Thermococcus kodakarensis (strain

Query: 1 KVIIGFTPG 9
KV+ FTPG
Sbjct: 82 KVVTAFTPG 90


>sp|RS12_THECE|SMALL ribosomal subunit protein uS12|Thermococcus celer

Query: 1 KVIIGFTPG 9
KV+ FTPG
Sbjct: 82 KVVTAFTPG 90


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 IIGFTPGS 10
++GF PGS
Sbjct: 290 LMGFRPGS 297


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 IIGFTPGS 10
++GF PGS
Sbjct: 288 LMGFRPGS 295


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 1 KVIIGFTPG 9
+V+IG PG
Sbjct: 42 RVVIGLRPG 50


>sp|RS3A_METJA|SMALL ribosomal subunit protein eS1|Methanocaldococcus jannaschii

Query: 2 VIIGFTPGS 10
V IG+TP +
Sbjct: 37 VFIGYTPAN 45


>sp|ILVC_CALMQ|KETOL-ACID reductoisomerase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 1 KVIIGFTPG 9
+VI+G PG
Sbjct: 42 RVIVGVRPG 50


>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KVIIGFTPG 9
K+I+ TPG
Sbjct: 184 KIILATTPG 192


>sp|ILVC_METPE|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaerula palustris (strain

Query: 2 VIIGFTPG 9
VIIG PG
Sbjct: 43 VIIGLRPG 50


>sp|SUCC_PYRIL|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum islandicum (strain

Query: 4 IGFTPGS 10
+GF PGS
Sbjct: 159 LGFKPGS 165


>sp|SUCD2_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Archaeoglobus fulgidus (strain

Query: 1 KVIIGFTPG 9
K++ G TPG
Sbjct: 34 KIVAGVTPG 42


>sp|RIFK_METHJ|RIBOFLAVIN kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 IIGFTP 8
I+GFTP
Sbjct: 122 ILGFTP 127


>sp|MER_ARCFU|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 IGFTPGS 10
+GF PGS
Sbjct: 144 LGFKPGS 150




167|SequenceR|840|831|LKPFHKVIIG

>sp|IF2P_METBU|PROBABLE translation initiation factor IF-2|Methanococcoides burtonii

Query: 3 PFHKVIIG 10
PFH VI+G
Sbjct: 402 PFHSVIVG 409


>sp|Y263_METJA|TPR repeat-containing protein MJ0263|Methanocaldococcus jannaschii

Query: 1 LKPFHKVII 9
L PFHK +I
Sbjct: 115 LSPFHKALI 123


>sp|COAD_THEGJ|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 KPFHKVIIG 10
KP+ KV++G
Sbjct: 3 KPYRKVVVG 11


>sp|PURA_HALMA|ADENYLOSUCCINATE synthetase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PFHKVIIG 10
PFH+V+ G
Sbjct: 104 PFHRVLDG 111


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 KPFHKVI 8
KPFHK +
Sbjct: 121 KPFHKFV 127


>sp|RIBL_KORCO|FAD synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LKPFHKVIIG 10
LKP +V++G
Sbjct: 70 LKPVDRVVLG 79


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 2 KPFHKVI 8
+PFHK +
Sbjct: 96 QPFHKAV 102


>sp|ACDB2_PYRFU|ACETATE--COA ligase [ADP-forming] II subunit|Pyrococcus furiosus (strain ATCC

Query: 1 LKPFHKVIIG 10
LKP +VIIG
Sbjct: 116 LKPGREVIIG 125


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PFHKVIIG 10
PF K++IG
Sbjct: 148 PFLKIVIG 155


>sp|DCDB_METJA|DCTP deaminase, dUMP-forming|Methanocaldococcus jannaschii (strain

Query: 1 LKPFHKVIIG 10
+KPF+K +G
Sbjct: 19 IKPFNKDFVG 28


>sp|NAT_SULAC|N-ALPHA-ACETYLTRANSFERASE acidocaldarius (strain ATCC 33909

Query: 1 LKPFHKVIIG 10
L+PF K+ +G
Sbjct: 96 LEPFRKIGVG 105


>sp|AROE_SULAC|SHIKIMATE dehydrogenase (NADP(+))|Sulfolobus acidocaldarius (strain ATCC

Query: 4 FHKVIIG 10
FH +IIG
Sbjct: 50 FHSIIIG 56


>sp|IF2P_THESM|PROBABLE translation initiation factor IF-2|Thermococcus sibiricus (strain

Query: 2 KPFHKVIIG 10
+PF+ V+IG
Sbjct: 404 EPFYGVVIG 412


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 LKPFH 5
LKPFH
Sbjct: 740 LKPFH 744


>sp|RIBL_ARCPA|FAD synthase|Archaeoglobus profundus (strain DSM 5631

Query: 1 LKPFHKVIIG 10
LKP K I+G
Sbjct: 61 LKPVDKAILG 70


>sp|RIBL_METV3|FAD synthase|Methanococcus voltae (strain ATCC BAA-1334

Query: 1 LKPFHKVIIG 10
LKP K I+G
Sbjct: 88 LKPVDKAILG 97


>sp|RIBL_METIM|FAD synthase|Methanocaldococcus infernus (strain DSM 11812

Query: 1 LKPFHKVIIG 10
LKP K I+G
Sbjct: 63 LKPVDKAILG 72


>sp|RIBL_METVM|FAD synthase|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 1 LKPFHKVIIG 10
LKP K I+G
Sbjct: 70 LKPVDKAILG 79


>sp|RIBL_METJA|FAD synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKPFHKVIIG 10
LKP K I+G
Sbjct: 64 LKPVDKAILG 73


>sp|GCSPA_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 PFHKVII 9
PFHK ++
Sbjct: 167 PFHKEVV 173


>sp|RIBL_METFA|FAD synthase|Methanocaldococcus fervens (strain DSM 4213

Query: 1 LKPFHKVIIG 10
LKP K I+G
Sbjct: 65 LKPVDKAILG 74


>sp|GCSPA_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 PFHKVII 9
PFHK ++
Sbjct: 167 PFHKEVV 173


>sp|GCSPA_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 PFHKVII 9
PFHK ++
Sbjct: 167 PFHKEVV 173


>sp|GCSPA_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 PFHKVII 9
PFHK ++
Sbjct: 167 PFHKEVV 173


>sp|GCSPA_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 PFHKVII 9
PFHK ++
Sbjct: 167 PFHKEVV 173


>sp|GCSPA_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 PFHKVII 9
PFHK ++
Sbjct: 167 PFHKEVV 173




168|SequenceR|845|836|LVKPLLKPFH

>sp|COFE_METTH|COENZYME F420:L-glutamate ligase|Methanothermobacter thermautotrophicus

Query: 2 VKPLLKP 8
VKPLL+P
Sbjct: 238 VKPLLRP 244


>sp|IDI2_HALSA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LVKPLLKP 8
L KP LKP
Sbjct: 297 LAKPFLKP 304


>sp|DAPAL_PYRAB|UNCHARACTERIZED DapA-like lyase PYRAB12600|Pyrococcus abyssi (strain GE5 /

Query: 2 VKPLLKPFH 10
+KP+L+P H
Sbjct: 263 IKPVLRPPH 271


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LVKPLLKPFH 10
+++P+ P+H
Sbjct: 359 VIRPVTNPYH 368


>sp|MTAD1_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LVKPLLKPFH 10
L KP ++P H
Sbjct: 358 LAKPYMQPEH 367


>sp|AROA_PYRFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LVKPLLKPF 9
+VKP+ KP+
Sbjct: 175 IVKPVSKPY 183


>sp|IF6_PYRAE|TRANSLATION initiation factor 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LVKPLLKP 8
LV PLL+P
Sbjct: 113 LVSPLLEP 120


>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KPLLKP 8
KPL+KP
Sbjct: 291 KPLIKP 296


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LVKPLLKPFH 10
+++P+ KP H
Sbjct: 357 IIRPVDKPVH 366


>sp|AATE_METTP|A-TYPE ATP synthase subunit E|Methanothrix thermoacetophila (strain DSM

Query: 1 LVKPLLKPF 9
L+K LL+P+
Sbjct: 104 LIKKLLEPY 112


>sp|KAE1_PYRHO|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus horikoshii

Query: 1 LVKPLLK 7
L+KPLLK
Sbjct: 50 LMKPLLK 56


>sp|SYTC_AERPE|THREONINE--TRNA ligase catalytic subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 VKPLLKPFH 10
VKP+ P+H
Sbjct: 107 VKPMNCPYH 115


>sp|IF6_PYRAR|TRANSLATION initiation factor 6|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LVKPLLKP 8
LV PLL+P
Sbjct: 113 LVSPLLEP 120


>sp|DAPAL_PYRHO|UNCHARACTERIZED DapA-like lyase PH0847|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VKPLLKP 8
+KP+L+P
Sbjct: 263 IKPILRP 269


>sp|Y574_METTH|UNCHARACTERIZED protein MTH_574|Methanothermobacter thermautotrophicus (strain

Query: 2 VKPLLKPF 9
V P+L+PF
Sbjct: 36 VMPVLRPF 43




169|SequenceR|850|841|VTGQVLVKPL

>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 3 GQVLVKPL 10
GQVL+KPL
Sbjct: 27 GQVLLKPL 34


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 3 GQVLVKPL 10
GQVL+KP+
Sbjct: 27 GQVLLKPI 34


>sp|RADA_METBF|DNA repair and recombination protein|Methanosarcina barkeri (strain

Query: 1 VTGQVLVKP 9
VT QV+ KP
Sbjct: 256 VTNQVMAKP 264


>sp|GLCD1_CALMQ|GLUCOSE 1-dehydrogenase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 GQVLVKPL 10
GQVL+KP+
Sbjct: 27 GQVLLKPI 34


>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 2 TGQVLVKP 9
+GQ++VKP
Sbjct: 312 SGQIIVKP 319


>sp|RADA_METMA|DNA repair and recombination protein|Methanosarcina mazei (strain ATCC

Query: 1 VTGQVLVKP 9
VT QV+ KP
Sbjct: 256 VTNQVMAKP 264


>sp|RADA_NANEQ|DNA repair and recombination protein|Nanoarchaeum equitans (strain

Query: 1 VTGQVLVKP 9
VT QV+ KP
Sbjct: 253 VTNQVMAKP 261


>sp|RADA_METAC|DNA repair and recombination protein|Methanosarcina acetivorans (strain

Query: 1 VTGQVLVKP 9
VT QV+ KP
Sbjct: 256 VTNQVMAKP 264


>sp|QUEC2_SULTO|7-CYANO-7-DEAZAGUANINE synthase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VTGQVLVKP 9
VTG +++KP
Sbjct: 4 VTGVLIIKP 12


>sp|RPO1C_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma acidophilum (strain ATCC

Query: 2 TGQVLVKP 9
+GQ+++KP
Sbjct: 312 SGQIIIKP 319


>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VTGQVLVKPL 10
VTG++ KPL
Sbjct: 184 VTGELKTKPL 193


>sp|ACAR_SULTO|ACRYLOYL-COENZYME A reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GQVLVKP 9
G+VLVKP
Sbjct: 328 GKVLVKP 334


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VTGQVLVKPL 10
VTG++ KPL
Sbjct: 182 VTGELKTKPL 191




170|SequenceR|855|846|AMRAFVTGQV

>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 AMRAFVTGQV 10
A R F TGQV
Sbjct: 5844 ATRVFATGQV 5853


>sp|NTPTH_SACS2|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AMRAFVTG 8
A+R F+TG
Sbjct: 8 ALRVFITG 15


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 1 AMRAFVTGQV 10
A+RA TGQ+
Sbjct: 498 ALRATATGQL 507


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 1 AMRAFVTGQV 10
A+RA TGQ+
Sbjct: 498 ALRATATGQL 507




171|SequenceR|860|851|TKQEPAMRAF

>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 4 EPAMRA 9
EPAMRA
Sbjct: 427 EPAMRA 432




172|SequenceR|865|856|ECVLETKQEP

>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CVLETKQE 9
CVLETK E
Sbjct: 171 CVLETKAE 178


>sp|GGR_HALVD|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Haloferax volcanii (strain ATCC 29605

Query: 2 CVLETKQE 9
CVLET+ E
Sbjct: 31 CVLETESE 38


>sp|IF2P_STAMF|PROBABLE translation initiation factor IF-2|Staphylothermus marinus (strain

Query: 3 VLETKQEP 10
VLE K+EP
Sbjct: 244 VLEVKEEP 251


>sp|IF2P_METKA|PROBABLE translation initiation factor IF-2|Methanopyrus kandleri (strain

Query: 2 CVLETKQEP 10
+LE K+EP
Sbjct: 240 AILEVKEEP 248




173|SequenceR|870|861|QLKQLECVLE

>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 3 KQLECVLE 10
K LEC+LE
Sbjct: 130 KLLECILE 137


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 QLECVLE 10
QLEC LE
Sbjct: 857 QLECSLE 863


>sp|ALF1_THETK|FRUCTOSE-BISPHOSPHATE aldolase class 1|Thermoproteus tenax (strain ATCC 35583

Query: 2 LKQLECVLE 10
LKQ+E VLE
Sbjct: 214 LKQVEGVLE 222


>sp|RS13_METST|SMALL ribosomal subunit protein uS13|Methanosphaera stadtmanae (strain

Query: 2 LKQLECVLE 10
+KQ+E VLE
Sbjct: 61 VKQIEAVLE 69


>sp|AAT_THEKO|ASPARTATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KQLECVLE 10
++LEC LE
Sbjct: 337 EELECALE 344




174|SequenceR|875|866|MGVCYQLKQL

>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain DSM

Query: 2 GVCYQLKQL 10
G YQLKQL
Sbjct: 142 GAYYQLKQL 150


>sp|Y962_METM5|UPF0285 protein MmarC5_0962|Methanococcus maripaludis (strain C5 /

Query: 1 MGVCYQL 7
MGVCY +
Sbjct: 55 MGVCYSM 61


>sp|Y247_METM6|UPF0285 protein MmarC6_0247|Methanococcus maripaludis (strain C6 /

Query: 1 MGVCYQL 7
MGVCY +
Sbjct: 55 MGVCYSM 61


>sp|Y1666_METM7|UPF0285 protein MmarC7_1666|Methanococcus maripaludis (strain C7 /

Query: 1 MGVCYQL 7
MGVCY +
Sbjct: 55 MGVCYSM 61


>sp|SRP54_THEKO|SIGNAL recognition particle 54 kDa|Thermococcus kodakarensis (strain ATCC

Query: 2 GVCYQLKQL 10
G YQL+QL
Sbjct: 142 GAYYQLRQL 150


>sp|RS10_METM5|SMALL ribosomal subunit protein uS10|Methanococcus maripaludis (strain

Query: 2 GVCYQLKQL 10
GVC Q+K +
Sbjct: 18 GVCNQIKAI 26


>sp|RS10_METMA|SMALL ribosomal subunit protein uS10|Methanosarcina mazei (strain ATCC

Query: 2 GVCYQLKQL 10
GVC Q+K +
Sbjct: 18 GVCNQVKSI 26


>sp|RS10_METBF|SMALL ribosomal subunit protein uS10|Methanosarcina barkeri (strain

Query: 2 GVCYQLKQL 10
GVC Q+K +
Sbjct: 18 GVCNQVKSI 26


>sp|RS10_METAC|SMALL ribosomal subunit protein uS10|Methanosarcina acetivorans (strain

Query: 2 GVCYQLKQL 10
GVC Q+K +
Sbjct: 18 GVCNQVKSI 26




175|SequenceR|880|871|AGDGCMGVCY

>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 1 AGDGCMGVC 9
AGD C+ VC
Sbjct: 237 AGDSCIIVC 245


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 AGDGCMGVC 9
AGDG GVC
Sbjct: 497 AGDGLKGVC 505


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AGDGCMGVC 9
AGDG GVC
Sbjct: 497 AGDGLKGVC 505


>sp|RPO1C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus vannielii (strain ATCC

Query: 2 GDGCMGVC 9
G GC+ VC
Sbjct: 368 GTGCINVC 375


>sp|Y441_NANEQ|PROTEIN NEQ441|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 GCMGVCY 10
GCMG+ Y
Sbjct: 49 GCMGIPY 55


>sp|RPO1C_METM7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C7 /

Query: 2 GDGCMGVC 9
G GC+ VC
Sbjct: 368 GTGCIDVC 375


>sp|RPO1C_METM6|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C6 /

Query: 2 GDGCMGVC 9
G GC+ VC
Sbjct: 368 GTGCIDVC 375


>sp|RPO1C_METMP|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain DSM

Query: 2 GDGCMGVC 9
G GC+ +C
Sbjct: 368 GTGCIDIC 375


>sp|RPO1C_METM5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C5 /

Query: 2 GDGCMGVC 9
G GC+ +C
Sbjct: 368 GTGCIDIC 375


>sp|AMTAB_ARCFU|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Archaeoglobus

Query: 3 DGCMGVC 9
+GC+G C
Sbjct: 141 EGCLGKC 147


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 AGDGC 5
AGDGC
Sbjct: 448 AGDGC 452


>sp|CAS1_KORCO|CRISPR-ASSOCIATED endonuclease Cas1|Korarchaeum cryptofilum (strain OPF8)

Query: 5 CMGVCY 10
C+ VCY
Sbjct: 213 CLNVCY 218


>sp|Y1137_METTH|UNCHARACTERIZED protein MTH_1137|Methanothermobacter thermautotrophicus (strain

Query: 4 GCMGVCY 10
GC G CY
Sbjct: 139 GCGGQCY 145


>sp|AMTAB_METJA|PROBABLE threonylcarbamoyladenosine tRNA

Query: 3 DGCMGVC 9
+GC+G C
Sbjct: 153 EGCIGNC 159




176|SequenceR|885|876|AGCDNAGDGC

>sp|RNH2_ARCFU|RIBONUCLEASE HII|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AGCDNAGDGC 10
AG D AG GC
Sbjct: 3 AGIDEAGKGC 12


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 4 DNAGDG 9
DNAGDG
Sbjct: 587 DNAGDG 592


>sp|Y202_METJA|UNCHARACTERIZED protein MJ0202|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CDNAGD 8
CDNAG+
Sbjct: 174 CDNAGE 179


>sp|RPO3_METKA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanopyrus kandleri (strain AV19 /

Query: 3 CDNAGDGC 10
CD G GC
Sbjct: 87 CDCGGKGC 94


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 GCDNAGDG 9
GC N GDG
Sbjct: 522 GCPNYGDG 529


>sp|NNR_PYRAE|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Pyrobaculum aerophilum (strain

Query: 4 DNAGDG 9
DN GDG
Sbjct: 56 DNGGDG 61


>sp|CH60_METAC|CHAPERONIN GroEL|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 DNAGDG 9
DN GDG
Sbjct: 82 DNTGDG 87


>sp|CH60_METBF|CHAPERONIN GroEL|Methanosarcina barkeri (strain Fusaro /

Query: 4 DNAGDG 9
DN GDG
Sbjct: 82 DNTGDG 87


>sp|RNH2_METMA|RIBONUCLEASE HII|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AGCDNAGDG 9
AG D AG G
Sbjct: 4 AGIDEAGKG 12


>sp|RNH2_METBF|RIBONUCLEASE HII|Methanosarcina barkeri (strain Fusaro /

Query: 1 AGCDNAGDG 9
AG D AG G
Sbjct: 4 AGIDEAGKG 12


>sp|RNH2_METAC|RIBONUCLEASE HII|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AGCDNAGDG 9
AG D AG G
Sbjct: 4 AGIDEAGKG 12


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 2 GCDNAGDG 9
G DNAG G
Sbjct: 76 GVDNAGVG 83


>sp|CH60_METMA|CHAPERONIN GroEL|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 DNAGDG 9
DN GDG
Sbjct: 82 DNTGDG 87


>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 1 AGCDNAGDG 9
A C AGDG
Sbjct: 228 AACAFAGDG 236


>sp|PROB_METAC|GLUTAMATE 5-kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GCDNAGDGC 10
GCD+ + C
Sbjct: 27 GCDHTKENC 35


>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GCDNAGDGC 10
GC GD C
Sbjct: 405 GCTMCGDYC 413


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 GCDNAGDGC 10
GC GD C
Sbjct: 406 GCTMCGDFC 414


>sp|PROB_METMA|GLUTAMATE 5-kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GCDNAGDGC 10
GCD+ + C
Sbjct: 27 GCDHTRENC 35




177|SequenceR|890|881|DAAKLAGCDN

>sp|DPH2_PYRHO|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 AKLAGCD 9
AKL GCD
Sbjct: 66 AKLVGCD 72


>sp|TMG10_METJA|TRNA (guanine(10)-N2)-dimethyltransferase|Methanocaldococcus jannaschii

Query: 2 AAKLAGCD 9
AKL GCD
Sbjct: 227 GAKLIGCD 234


>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 1 DAAKLAGC 8
DA++L GC
Sbjct: 247 DASRLIGC 254


>sp|HISX_METJA|HISTIDINOL dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 AKLAGCD 9
AK+AGC+
Sbjct: 150 AKVAGCE 156


>sp|COFG_METMJ|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DAAKLAGC 8
DA++L GC
Sbjct: 247 DASRLIGC 254


>sp|HISX_METMA|HISTIDINOL dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AAKLAGCD 9
AAK+AG D
Sbjct: 175 AAKVAGAD 182


>sp|HISX_METBF|HISTIDINOL dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 2 AAKLAGCD 9
AAK+AG D
Sbjct: 175 AAKVAGAD 182


>sp|HISX_METAC|HISTIDINOL dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AAKLAGCD 9
AAK+AG D
Sbjct: 175 AAKVAGAD 182




178|SequenceR|895|886|LSIGVDAAKL

>sp|GCH3_NATPD|GTP cyclohydrolase III|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LSIGVDAA 8
LSIGVD++
Sbjct: 88 LSIGVDSS 95


>sp|HELS_PYRFU|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LSIGVDAAKL 10
LS+G+ AKL
Sbjct: 480 LSLGIRTAKL 489


>sp|LYSK_THEKO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Thermococcus kodakarensis

Query: 2 SIGVDAAK 9
S+GVDAA+
Sbjct: 168 SLGVDAAE 175




179|SequenceR|900|891|AEAQSLSIGV

***** No hits found ******


180|SequenceR|905|896|PSVVSAEAQS

>sp|PURA_METTP|ADENYLOSUCCINATE synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PSVVSAEAQ 9
PSVV EAQ
Sbjct: 174 PSVVRDEAQ 182




181|SequenceR|910|901|MSSTFPSVVS

***** No hits found ******


182|SequenceR|915|906|CEISAMSSTF

>sp|GUAAA_NATPD|GMP synthase [glutamine-hydrolyzing] subunit A|Natronomonas pharaonis

Query: 1 CEISAMSST 9
C I AMS T
Sbjct: 143 CNIEAMSDT 151


>sp|TRPD_METBU|ANTHRANILATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 2 EISAMSSTF 10
EIS +S TF
Sbjct: 224 EISTLSETF 232




183|SequenceR|920|911|IVMPVCEISA

>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 IVMPVCE 7
+ MPVCE
Sbjct: 174 VYMPVCE 180




184|SequenceR|925|916|CRGERIVMPV

>sp|Y897_ARCFU|UNCHARACTERIZED protein AF_0897|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CRGERI 6
CRGERI
Sbjct: 315 CRGERI 320


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RGERIVMP 9
RG+R+V+P
Sbjct: 2 RGKRVVLP 9


>sp|ENO1_METHJ|ENOLASE 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 CRGERI 6
CRGER+
Sbjct: 392 CRGERV 397


>sp|ENO2_METHJ|ENOLASE 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 CRGERI 6
CRGER+
Sbjct: 393 CRGERV 398


>sp|AROB_PYRCJ|3-DEHYDROQUINATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 RGERIVMPV 10
RGE ++MPV
Sbjct: 305 RGEYVLMPV 313


>sp|PANB_HYPBU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 RGERIVM 8
RGERIVM
Sbjct: 18 RGERIVM 24


>sp|IF2B_METLZ|TRANSLATION initiation factor 2 subunit|Methanocorpusculum labreanum (strain

Query: 3 GERIVMP 9
GER VMP
Sbjct: 23 GERFVMP 29


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 GERIVMP 9
GERI++P
Sbjct: 615 GERIIIP 621


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 CRGERIVM 8
CRG R+++
Sbjct: 283 CRGSRVIV 290


>sp|DUT_METTH|PROBABLE deoxyuridine 5'-triphosphate

Query: 2 RGERIVMPV 10
RGERIV V
Sbjct: 126 RGERIVQAV 134


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 1 CRGERIV 7
CR ER+V
Sbjct: 214 CRSERVV 220


>sp|RNZ_METTH|RIBONUCLEASE Z|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 GERIVMP 9
G+RI+MP
Sbjct: 183 GDRIIMP 189


>sp|RS8_AERPE|SMALL ribosomal subunit protein uS8|Aeropyrum pernix (strain ATCC

Query: 2 RGERIVMP 9
+GE I+MP
Sbjct: 22 KGEAIIMP 29


>sp|ASD_METAC|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanosarcina

Query: 1 CRGERIV 7
C+GER++
Sbjct: 187 CKGERVL 193


>sp|HPRT_METHJ|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 CRGERIVM 8
C G+RIV+
Sbjct: 113 CTGDRIVI 120


>sp|ACDD_METKA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanopyrus kandleri

Query: 1 CRGERIVM 8
C GER+++
Sbjct: 224 CEGERVML 231


>sp|PGK_METTH|PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 ERIVMPV 10
ERIV+PV
Sbjct: 278 ERIVVPV 284




185|SequenceR|930|921|STDLSCRGER

>sp|TRUD_PYRNV|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum neutrophilum (strain DSM

Query: 3 DLSCRGE 9
+L+CRGE
Sbjct: 220 ELACRGE 226


>sp|TRUD_PYRAR|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum arsenaticum (strain DSM

Query: 3 DLSCRGE 9
+L+CRGE
Sbjct: 220 ELACRGE 226


>sp|ENO1_METHJ|ENOLASE 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 TDLSCRGER 10
T CRGER
Sbjct: 388 TGAPCRGER 396


>sp|ENO2_METHJ|ENOLASE 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 TDLSCRGER 10
T CRGER
Sbjct: 389 TGAPCRGER 397


>sp|Y897_ARCFU|UNCHARACTERIZED protein AF_0897|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LSCRGER 10
+ CRGER
Sbjct: 313 IKCRGER 319


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 LSCRGER 10
LSCRG R
Sbjct: 281 LSCRGSR 287


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 2 TDLSCRGER 10
TD+ C G R
Sbjct: 27 TDIECEGWR 35


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 2 TDLSCRGER 10
TD+ C G R
Sbjct: 27 TDIECEGWR 35




186|SequenceR|935|926|KFVSFSTDLS

>sp|ARGD_ARCFU|ACETYLORNITHINE aminotransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KFVSFSTDL 9
KFVSF+ D
Sbjct: 121 KFVSFTGDF 129


>sp|Y1061_METJA|UNCHARACTERIZED membrane protein MJ1061|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KFVSFSTD 8
KF++ STD
Sbjct: 125 KFITISTD 132


>sp|Y1261_METTH|UPF0104 membrane protein MTH_1261|Methanothermobacter thermautotrophicus

Query: 2 FVSFSTDLS 10
F +F TD+S
Sbjct: 247 FTAFGTDIS 255




187|SequenceR|940|931|YLAMYKFVSF

***** No hits found ******


188|SequenceR|945|936|FQTLSYLAMY

>sp|ADEC_METTP|ADENINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FQTLSYLAM 9
F TLS+LA+
Sbjct: 532 FMTLSFLAL 540




189|SequenceR|950|941|ILVSIFQTLS

***** No hits found ******


190|SequenceR|955|946|NITYLILVSI

>sp|DGGGP_METS3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 NITYLILVSI 10
NI YLI+VSI
Sbjct: 227 NINYLIVVSI 236




191|SequenceR|960|951|DGLNTNITYL

>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DGLNTNITYL 10
+GLNT ITY+
Sbjct: 453 EGLNTGITYM 462


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DGLNTNITYL 10
DG++T ITYL
Sbjct: 449 DGVSTGITYL 458


>sp|DAPA_METM6|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 DGLNTNITYL 10
DGL TNI YL
Sbjct: 20 DGLRTNIDYL 29


>sp|DAPA_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 DGLNTNITYL 10
DGL TNI +L
Sbjct: 20 DGLRTNIDFL 29


>sp|DAPA_METHJ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DGLNTNITYL 10
DGL +NI +L
Sbjct: 24 DGLRSNIAHL 33


>sp|Y579_METJA|UNCHARACTERIZED protein MJ0579|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GLNTNITY 9
G+N+NIT+
Sbjct: 107 GINSNITF 114


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 DGLNTNITY 9
D L TN++Y
Sbjct: 153 DELKTNVSY 161


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DGLNTNITYL 10
DG NI YL
Sbjct: 152 DGFYENIVYL 161


>sp|THIL_METJA|THIAMINE-MONOPHOSPHATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGLNTNITYL 10
DGL ITY
Sbjct: 221 DGLGKEITYF 230




192|SequenceR|965|956|ALFQLDGLNT

>sp|BIOB_METM6|BIOTIN synthase|Methanococcus maripaludis (strain C6 /

Query: 1 ALFQLDGL 8
+LF LDGL
Sbjct: 293 SLFALDGL 300




193|SequenceR|970|961|IVLDIALFQL

>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LDIALFQL 10
L++ALFQL
Sbjct: 430 LNVALFQL 437




194|SequenceR|975|966|AVTTTIVLDI

***** No hits found ******


195|SequenceR|980|971|RSMLVAVTTT

>sp|GLMS_PYRHO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus horikoshii (strain ATCC

Query: 1 RSMLVAVTTT 10
RS+L+A+T +
Sbjct: 336 RSLLIAITQS 345




196|SequenceR|985|976|LAPGTRSMLV

>sp|HCGB_METJA|PYRIDINOL guanylyltransferase HcgB|Methanocaldococcus jannaschii (strain ATCC

Query: 2 APGTRSMLV 10
APG+ SMLV
Sbjct: 107 APGSGSMLV 115


>sp|HEM1_METLZ|GLUTAMYL-TRNA reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LAPGTRSMLV 10
LA GT+SM++
Sbjct: 93 LAAGTKSMII 102


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LAPGTRSM 8
LAPGTR +
Sbjct: 99 LAPGTRVL 106


>sp|MEND_NATPD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LAPGTRS 7
LAPG+RS
Sbjct: 28 LAPGSRS 34


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 LAPGTRSMLV 10
L PGTRS V
Sbjct: 421 LPPGTRSYKV 430


>sp|RL4_SACI2|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 LAPGTRS 7
LAPGT S
Sbjct: 237 LAPGTHS 243


>sp|RL4_METHJ|LARGE ribosomal subunit protein uL4|Methanospirillum hungatei JF-1

Query: 1 LAPGTRS 7
LAPGT S
Sbjct: 225 LAPGTHS 231




197|SequenceR|990|981|VRGLVLAPGT

>sp|KDGK_THEAC|2-DEHYDRO-3-DEOXYGLUCONOKINASE acidophilum (strain ATCC 25905

Query: 3 GLVLAPGT 10
G+V APGT
Sbjct: 120 GVVFAPGT 127


>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 2 RGLVLAPG 9
RG +LAPG
Sbjct: 567 RGSILAPG 574


>sp|NUCS_SULAC|ENDONUCLEASE NucS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RGLVLAPG 9
RG+++APG
Sbjct: 202 RGILVAPG 209


>sp|SYP_HALLT|PROLINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 RGLVLAPG 9
+GLVL PG
Sbjct: 284 QGLVLPPG 291


>sp|HIS5_NATPD|IMIDAZOLE glycerol phosphate synthase subunit|Natronomonas pharaonis (strain

Query: 1 VRGLVLAPG 9
VRGL L PG
Sbjct: 106 VRGLDLVPG 114


>sp|NUCS_SACI7|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VRGLVLAP 8
VRG+++AP
Sbjct: 202 VRGILVAP 209


>sp|NUCS_SACI4|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VRGLVLAP 8
VRG+++AP
Sbjct: 202 VRGILVAP 209


>sp|NUCS_SACI3|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VRGLVLAP 8
VRG+++AP
Sbjct: 202 VRGILVAP 209


>sp|NUCS_SACI2|ENDONUCLEASE NucS|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VRGLVLAP 8
VRG+++AP
Sbjct: 202 VRGILVAP 209


>sp|NUCS_SACI1|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VRGLVLAP 8
VRG+++AP
Sbjct: 202 VRGILVAP 209


>sp|NUCS_PYRHO|ENDONUCLEASE NucS|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VRGLVLAP 8
VRG+++AP
Sbjct: 203 VRGILVAP 210


>sp|NUCS_PYRAB|ENDONUCLEASE NucS|Pyrococcus abyssi (strain GE5 /

Query: 1 VRGLVLAP 8
VRG+++AP
Sbjct: 203 VRGILVAP 210


>sp|RNZ_METMA|RIBONUCLEASE Z|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VRGLVLAPG 9
VRG+ L+PG
Sbjct: 113 VRGVELSPG 121


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 3 GLVLAPGT 10
GLV+APG+
Sbjct: 98 GLVVAPGS 105


>sp|NUCS_PYRFU|ENDONUCLEASE NucS|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VRGLVLAP 8
VRG+++AP
Sbjct: 205 VRGILVAP 212


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VRGLVLAPGT 10
+RGLVL G+
Sbjct: 475 MRGLVLTSGS 484


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 1 VRGLVLAPG 9
VRGL +PG
Sbjct: 384 VRGLPASPG 392


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 2 RGLVLAPGT 10
RG+ + PGT
Sbjct: 1582 RGIKIRPGT 1590


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 2 RGLVLAPGT 10
RG+ + PGT
Sbjct: 689 RGIKIRPGT 697


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 2 RGLVLAPGT 10
RG+ + PGT
Sbjct: 1613 RGIKIRPGT 1621


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 2 RGLVLAPGT 10
RG+ + PGT
Sbjct: 689 RGIKIRPGT 697


>sp|NUCS_THEKO|ENDONUCLEASE NucS|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VRGLVLAP 8
VRG+++AP
Sbjct: 208 VRGILVAP 215


>sp|COFC_METTP|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 GLVLAPG 9
G+VLAPG
Sbjct: 121 GVVLAPG 127


>sp|NUCS2_HALSA|ENDONUCLEASE NucS 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 VRGLVLAP 8
VRG+++AP
Sbjct: 205 VRGMLVAP 212




198|SequenceR|995|986|AGPPRVRGLV

>sp|FBPAP_METTM|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanothermobacter marburgensis (strain ATCC

Query: 2 GPPRVRGL 9
GPPRV GL
Sbjct: 287 GPPRVIGL 294


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 1 AGPPRV 6
AGPPRV
Sbjct: 314 AGPPRV 319


>sp|SPT5_METJA|TRANSCRIPTION elongation factor Spt5|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GPPRVRGLV 10
G PRVRG+V
Sbjct: 59 GMPRVRGIV 67


>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GPPRVRGL 9
GPPR+ GL
Sbjct: 287 GPPRLLGL 294


>sp|HMDH_METTH|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 AGPPRVRG 8
AGP RVRG
Sbjct: 74 AGPLRVRG 81


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GPPRVRG 8
GPP+V+G
Sbjct: 403 GPPKVKG 409


>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 2 GPPRVRGL 9
GPPR+ GL
Sbjct: 287 GPPRLIGL 294


>sp|AROB_AERPE|3-DEHYDROQUINATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AGPPRVRGL 9
AG PR RGL
Sbjct: 229 AGDPRERGL 237


>sp|THI4_PYRAE|THIAMINE thiazole synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PPRVRGLV 10
PPRV GL+
Sbjct: 133 PPRVTGLL 140


>sp|THI4_PYRAR|THIAMINE thiazole synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 PPRVRGLV 10
PPRV GL+
Sbjct: 133 PPRVAGLL 140


>sp|RS12_METTP|SMALL ribosomal subunit protein uS12|Methanothrix thermoacetophila

Query: 2 GPPRVRGLV 10
G PR RG+V
Sbjct: 41 GAPRARGIV 49


>sp|THI4_PYRCJ|THIAMINE thiazole synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 PPRVRGLV 10
PPRV GL+
Sbjct: 133 PPRVAGLL 140


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 4 PRVRGLV 10
PR RGLV
Sbjct: 354 PRFRGLV 360


>sp|SPT5_AERPE|TRANSCRIPTION elongation factor Spt5|Aeropyrum pernix (strain ATCC 700893

Query: 3 PPRVRGLV 10
PPR++G V
Sbjct: 43 PPRIKGYV 50


>sp|THI4_PYRNV|THIAMINE thiazole synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 PPRVRGLV 10
PPRV GL+
Sbjct: 133 PPRVAGLL 140


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 4 PRVRGL 9
PRVRGL
Sbjct: 54 PRVRGL 59


>sp|NADE_METTH|NH(3)-DEPENDENT NAD(+) synthetase|Methanothermobacter thermautotrophicus (strain

Query: 2 GPPRVRGLV 10
GP RV GL+
Sbjct: 53 GPDRVLGLI 61


>sp|FBPAP_THEON|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus onnurineus (strain NA1)

Query: 2 GPPRVRGL 9
GPPRV L
Sbjct: 296 GPPRVVAL 303


>sp|THI4_PYRIL|THIAMINE thiazole synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PPRVRGLV 10
PPRV GL+
Sbjct: 133 PPRVVGLL 140




199|SequenceR|1000|991|PVSLLAGPPR

>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PVSLLAGPPR 10
P SLL PPR
Sbjct: 347 PSSLLLNPPR 356


>sp|RFCL_THEKO|REPLICATION factor C large subunit|Thermococcus kodakarensis (strain ATCC

Query: 4 LLAGPP 9
LLAGPP
Sbjct: 47 LLAGPP 52


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LLAGPP 9
LLAGPP
Sbjct: 40 LLAGPP 45


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LLAGPP 9
LLAGPP
Sbjct: 47 LLAGPP 52


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LLAGPP 9
LLAGPP
Sbjct: 47 LLAGPP 52


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 4 LLAGPP 9
LLAGPP
Sbjct: 43 LLAGPP 48


>sp|RFCL_PYRAB|REPLICATION factor C large subunit|Pyrococcus abyssi (strain GE5 /

Query: 4 LLAGPP 9
LLAGPP
Sbjct: 47 LLAGPP 52


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM

Query: 4 LLAGPP 9
LLAGPP
Sbjct: 43 LLAGPP 48


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 4 LLAGPP 9
LLAGPP
Sbjct: 43 LLAGPP 48


>sp|RFCL_PYRIL|REPLICATION factor C large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 4 LLAGPP 9
LLAGPP
Sbjct: 60 LLAGPP 65


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 4 LLAGPP 9
LLAGPP
Sbjct: 43 LLAGPP 48


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PVSLLAGPPR 10
PV +L GP R
Sbjct: 826 PVGVLTGPVR 835


>sp|RFCL_PYRAR|REPLICATION factor C large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 LLAGPP 9
LLAGPP
Sbjct: 60 LLAGPP 65


>sp|RS6E_METS5|SMALL ribosomal subunit protein eS6|Metallosphaera sedula (strain ATCC

Query: 4 LLAGPP 9
LLAGPP
Sbjct: 174 LLAGPP 179


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 LLAGPP 9
LLAGPP
Sbjct: 60 LLAGPP 65


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PVSLLAGPP 9
P LLA PP
Sbjct: 351 PTILLADPP 359


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 1 PVSLLAGPP 9
P LLA PP
Sbjct: 351 PAKLLADPP 359


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 1 PVSLLAGPP 9
P LLA PP
Sbjct: 351 PAKLLADPP 359


>sp|RL3_METST|LARGE ribosomal subunit protein uL3|Methanosphaera stadtmanae (strain

Query: 1 PVSLLAGPP 9
PV++L PP
Sbjct: 70 PVTILEAPP 78


>sp|RFCL_PYRNV|REPLICATION factor C large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 LLAGPP 9
LLAGPP
Sbjct: 60 LLAGPP 65


>sp|RS6E_AERPE|SMALL ribosomal subunit protein eS6|Aeropyrum pernix (strain ATCC 700893

Query: 4 LLAGPP 9
LLAGPP
Sbjct: 184 LLAGPP 189




200|SequenceR|1005|996|LSSLVPVSLL

***** No hits found ******


201|SequenceR|1010|1001|VMQLLLSSLV

***** No hits found ******


202|SequenceR|1015|1006|VGTVLVMQLL

>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 1 VGTVLVMQL 9
+GTVLV +L
Sbjct: 115 IGTVLVEEL 123




203|SequenceR|1020|1011|YGGLQVGTVL

>sp|CDPAS_PYRHO|CDP-ARCHAEOL synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YGGLQVGTVL 10
+GGL VGT++
Sbjct: 55 FGGLIVGTII 64


>sp|CDPAS_PYRAB|CDP-ARCHAEOL synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 YGGLQVGTVL 10
+GG+ VGTV+
Sbjct: 53 FGGITVGTVV 62


>sp|THII_THEKO|PROBABLE tRNA sulfurtransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 YGGLQVGT 8
+GGL +GT
Sbjct: 172 WGGLPIGT 179


>sp|IF2P_NATPD|PROBABLE translation initiation factor IF-2|Natronomonas pharaonis (strain

Query: 2 GGLQVGTVL 10
GG VGTVL
Sbjct: 239 GGPGVGTVL 247


>sp|NFI_DESA1|ENDONUCLEASE V|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 GGLQVGTVL 10
GG+QVG+ +
Sbjct: 46 GGVQVGSAV 54


>sp|CETZ_METTP|TUBULIN-LIKE protein CetZ|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GGLQVGTV 9
GGL++GT+
Sbjct: 227 GGLRMGTL 234




204|SequenceR|1025|1016|ALTLFYGGLQ

>sp|DGGGP_METS5|DIGERANYLGERANYLGLYCERYL phosphate synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 ALTLFYGGLQ 10
AL+LFYGGL
Sbjct: 138 ALSLFYGGLS 147


>sp|DGGGP_SACS2|DIGERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ALTLFYGGL 9
AL++FYGGL
Sbjct: 140 ALSIFYGGL 148


>sp|GGGPS_HALWD|GERANYLGERANYLGLYCERYL phosphate synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 TLFYGG 8
TLFYGG
Sbjct: 186 TLFYGG 191


>sp|GGGPS_HALMA|GERANYLGERANYLGLYCERYL phosphate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 TLFYGG 8
TLFYGG
Sbjct: 185 TLFYGG 190


>sp|QUEC_ARCFU|7-CYANO-7-DEAZAGUANINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ALTLFYG 7
ALT FYG
Sbjct: 29 ALTFFYG 35


>sp|AMT3_ARCFU|AMMONIUM transporter Amt3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ALTLFYGGL 9
AL LFYGG+
Sbjct: 22 ALGLFYGGM 30


>sp|ADEC_METBU|ADENINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ALTLFYGGL 9
A T+F+GGL
Sbjct: 20 ADTIFFGGL 28


>sp|MTRH_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanothermobacter

Query: 1 ALTLFYGG 8
A T+FYGG
Sbjct: 30 AGTIFYGG 37


>sp|MTRH_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanothermobacter marburgensis

Query: 1 ALTLFYGG 8
A T+FYGG
Sbjct: 30 AGTIFYGG 37


>sp|DGGGP_SULTO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ALTLFYGGL 9
AL+ FYGGL
Sbjct: 140 ALSAFYGGL 148


>sp|GSA_HYPBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Hyperthermus butylicus (strain DSM 5456

Query: 1 ALTLFYGGL 9
ALTLF GG+
Sbjct: 13 ALTLFPGGV 21


>sp|CSD_AERPE|PROBABLE cysteine desulfurase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ALTLFYGGL 9
ALTL Y GL
Sbjct: 97 ALTLAYNGL 105


>sp|GGGPS_NATPD|GERANYLGERANYLGLYCERYL phosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 TLFYGG 8
T+FYGG
Sbjct: 186 TVFYGG 191


>sp|GGGPS_METMJ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 TLFYGG 8
TL+YGG
Sbjct: 185 TLYYGG 190


>sp|MNTP_METHJ|MANGANESE exporter MntP|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LTLFYGGLQ 10
L LF+GG Q
Sbjct: 40 LALFFGGFQ 48


>sp|Y83B_METJA|PROBABLE pilin MJ0835.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LTLFYGGL 9
+TL YGG+
Sbjct: 75 VTLIYGGI 82


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LTLFYGGL 9
L L+YGG+
Sbjct: 458 LRLYYGGV 465


>sp|Y663_METTH|PUTATIVE ammonium transporter MTH_663|Methanothermobacter

Query: 2 LTLFYGGLQ 10
+ LFYGGL
Sbjct: 33 VALFYGGLT 41


>sp|MNTP_METBF|MANGANESE exporter MntP|Methanosarcina barkeri (strain Fusaro /

Query: 2 LTLFYGGLQ 10
L +F+GG Q
Sbjct: 39 LAVFFGGFQ 47




205|SequenceR|1030|1021|VFWPQALTLF

>sp|SUA5_PYRAB|THREONYLCARBAMOYL-AMP synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 FWPQALTL 9
FWP LTL
Sbjct: 92 FWPGPLTL 99


>sp|MTBA_METMA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FWPQA 6
FWP+A
Sbjct: 42 FWPEA 46


>sp|Y129_METJA|UNCHARACTERIZED protein MJ0129|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VFWPQALTLF 10
+F+PQ ++LF
Sbjct: 50 IFYPQNISLF 59




206|SequenceR|1035|1026|TRNLPVFWPQ

>sp|PYRK_METTH|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanothermobacter

Query: 5 PVFWPQ 10
PVFW Q
Sbjct: 239 PVFWSQ 244


>sp|DHYS_THEON|PROBABLE deoxyhypusine synthase|Thermococcus onnurineus (strain NA1)

Query: 2 RNLPVFWP 9
RN+P+F P
Sbjct: 204 RNVPIFCP 211


>sp|DHYS_THEKO|PROBABLE deoxyhypusine synthase|Thermococcus kodakarensis (strain ATCC

Query: 2 RNLPVFWP 9
RN+P+F P
Sbjct: 204 RNVPIFCP 211


>sp|DHYS_THEGJ|PROBABLE deoxyhypusine synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 RNLPVFWP 9
RN+P+F P
Sbjct: 204 RNVPIFCP 211


>sp|Y674_METJA|UNCHARACTERIZED protein MJ0674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RNLPVFW 8
+N+PV W
Sbjct: 199 KNIPVVW 205


>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 RNLPVFWPQ 10
R++PV W Q
Sbjct: 487 RSVPVVWQQ 495


>sp|PYRK_METKA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanopyrus kandleri

Query: 2 RNLPVFWPQ 10
R+ PVFW +
Sbjct: 235 RDGPVFWTE 243


>sp|GVPN2_HALSA|GAS vesicle ATPase GvpN2|Halobacterium salinarum (strain ATCC 700922

Query: 1 TRNLPVFW 8
TR+ PV W
Sbjct: 105 TRDRPVVW 112


>sp|RS4E_IGNH4|SMALL ribosomal subunit protein eS4|Ignicoccus hospitalis (strain

Query: 5 PVFWP 9
P FWP
Sbjct: 17 PAFWP 21


>sp|MTRH_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanopyrus kandleri (strain AV19 /

Query: 3 NLPVFWP 9
N P WP
Sbjct: 285 NAPAIWP 291


>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RNLPVFW 8
RN+ +FW
Sbjct: 213 RNIKLFW 219


>sp|RS4E_DESA1|SMALL ribosomal subunit protein eS4|Desulfurococcus amylolyticus

Query: 3 NLPVFWP 9
N P +WP
Sbjct: 14 NAPRYWP 20


>sp|CDPAS_METBF|CDP-ARCHAEOL synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 NLPVFWP 9
N+PVF P
Sbjct: 70 NMPVFGP 76




207|SequenceR|1040|1031|DPAAVTRNLP

>sp|LYSZ_PYRNV|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 1 DPAAVTRNLP 10
DP V NLP
Sbjct: 14 DPTKVVENLP 23


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DPAAVTRNLP 10
DPA VT LP
Sbjct: 10 DPAVVTCGLP 19


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DPAAVTRNLP 10
DPA VT LP
Sbjct: 27 DPAVVTCGLP 36


>sp|CH60_METVS|CHAPERONIN GroEL|Methanococcus vannielii (strain ATCC 35089

Query: 1 DPAAVTRN 8
DPA VTR+
Sbjct: 492 DPAKVTRS 499


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 1 DPAAVTRN 8
DP VTRN
Sbjct: 327 DPGDVTRN 334




208|SequenceR|1045|1036|YNPLNDPAAV

>sp|Y2133_ARCFU|UNCHARACTERIZED protein AF_2133|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YNPLNDP 7
YNPL DP
Sbjct: 250 YNPLRDP 256


>sp|Y1154_METLZ|UPF0173 metal-dependent hydrolase Mlab_1154|Methanocorpusculum labreanum

Query: 3 PLNDPAAV 10
PL DPAAV
Sbjct: 25 PLEDPAAV 32


>sp|RS3A_METJA|SMALL ribosomal subunit protein eS1|Methanocaldococcus jannaschii

Query: 1 YNPLNDPAAV 10
Y P NDP+ V
Sbjct: 41 YTPANDPSLV 50


>sp|Y1565_METJA|PROBABLE helicase MJ1565|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YNPLND 6
YNP+ND
Sbjct: 304 YNPIND 309


>sp|Y1999_ARCFU|UNCHARACTERIZED protein AF_1999|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YNPLNDPAA 9
Y LN+PAA
Sbjct: 8 YRALNNPAA 16


>sp|CBID_METS3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 NPLNDP 7
NP NDP
Sbjct: 66 NPYNDP 71


>sp|AATA_PYRAR|A-TYPE ATP synthase subunit A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YNPLNDPAA 9
YNP++ P+A
Sbjct: 510 YNPIDTPSA 518


>sp|RS3A_METVS|SMALL ribosomal subunit protein eS1|Methanococcus vannielii (strain

Query: 3 PLNDPAAV 10
P NDP+A+
Sbjct: 42 PANDPSAL 49


>sp|AATB_METS5|A-TYPE ATP synthase subunit B|Metallosphaera sedula (strain ATCC 51363

Query: 1 YNPLNDP 7
+NPL DP
Sbjct: 95 FNPLGDP 101


>sp|PRIS_METMA|DNA primase small subunit PriS|Methanosarcina mazei (strain ATCC

Query: 1 YNPLND 6
+NPLND
Sbjct: 348 FNPLND 353


>sp|Y1499_SULAC|PROBABLE glycosyltransferase Saci_1499|Sulfolobus acidocaldarius (strain

Query: 1 YNPLNDPA 8
++PLN PA
Sbjct: 330 HDPLNSPA 337


>sp|Y1385_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 3 PLNDP 7
PLNDP
Sbjct: 46 PLNDP 50


>sp|AATA_PYRAE|A-TYPE ATP synthase subunit A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YNPLNDPAA 9
YNP++ P+A
Sbjct: 510 YNPVDTPSA 518


>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NPLNDP 7
NPL DP
Sbjct: 195 NPLTDP 200


>sp|CBIA_METAC|COBYRINATE a,c-diamide synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YNPLNDP 7
++P+NDP
Sbjct: 303 FSPVNDP 309


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NPLNDP 7
NPL DP
Sbjct: 195 NPLTDP 200


>sp|SECY_PYRAB|PROTEIN translocase subunit SecY|Pyrococcus abyssi (strain GE5 /

Query: 2 NPLNDP 7
NPL DP
Sbjct: 195 NPLTDP 200


>sp|RS3A_METM7|SMALL ribosomal subunit protein eS1|Methanococcus maripaludis (strain

Query: 3 PLNDPAAV 10
P NDPA +
Sbjct: 42 PANDPATL 49


>sp|RS3A_METM6|SMALL ribosomal subunit protein eS1|Methanococcus maripaludis (strain

Query: 3 PLNDPAAV 10
P NDPA +
Sbjct: 42 PANDPATL 49


>sp|RS3A_METM5|SMALL ribosomal subunit protein eS1|Methanococcus maripaludis (strain

Query: 3 PLNDPAAV 10
P NDPA +
Sbjct: 42 PANDPATL 49


>sp|RPIA_KORCO|RIBOSE-5-PHOSPHATE isomerase A|Korarchaeum cryptofilum (strain OPF8)

Query: 3 PLNDPAAV 10
PL DPA++
Sbjct: 180 PLEDPASM 187


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 1 YNPLNDPAAV 10
Y P +PAA+
Sbjct: 114 YGPTKNPAAM 123


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 YNPLNDPAAV 10
Y P +PAA+
Sbjct: 114 YGPTKNPAAL 123


>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 NPLNDPA 8
NPLND A
Sbjct: 220 NPLNDVA 226


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 NPLNDPAAV 10
NPLND +
Sbjct: 290 NPLNDAQVI 298


>sp|RASEA_METAC|ARCHAEOSINE synthase subunit beta|Methanosarcina acetivorans (strain ATCC

Query: 2 NPLNDPAA 9
+P N+PAA
Sbjct: 19 SPTNEPAA 26


>sp|GATA_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 1 YNPLNDPAA 9
Y P N+P A
Sbjct: 133 YGPTNNPKA 141


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 1 YNPLND 6
YNP ND
Sbjct: 515 YNPSND 520




209|SequenceR|1050|1041|VVTNEYNPLN

>sp|AROA_PYRFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVTNEYNPLN 10
V +NE NPLN
Sbjct: 278 VESNERNPLN 287


>sp|ARE_SACSO|ARYLESTERASE solfataricus (Sulfolobus solfataricus)

Query: 1 VVTNEYNPLN 10
VVT EY+PL
Sbjct: 245 VVTAEYDPLR 254


>sp|Y1565_METJA|PROBABLE helicase MJ1565|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVTNEYNPLN 10
++T YNP+N
Sbjct: 299 IITLHYNPIN 308


>sp|PUR1_METJA|AMIDOPHOSPHORIBOSYLTRANSFERASE jannaschii (strain ATCC 43067

Query: 4 NEYNPLN 10
+EYNP+N
Sbjct: 236 SEYNPVN 242


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 VVTNEYNPLN 10
V++N Y+P N
Sbjct: 336 VLSNTYSPFN 345


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 2 VTNEYNPL 9
VTN YN L
Sbjct: 126 VTNTYNTL 133


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 3 TNEYNPLN 10
+N+++PLN
Sbjct: 300 SNQFDPLN 307


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 3 TNEYNPLN 10
+N+++PLN
Sbjct: 294 SNQFDPLN 301


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VVTNEYNPLN 10
V+ N+Y PL
Sbjct: 86 VIENDYKPLG 95


>sp|PSB2_SACS9|PROTEASOME subunit beta 2|Saccharolobus solfataricus (strain 98/2) (Sulfolobus

Query: 1 VVTNEYNP 8
V+ +EYNP
Sbjct: 154 VLEDEYNP 161


>sp|PSB2_SACS2|PROTEASOME subunit beta 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VVTNEYNP 8
V+ +EYNP
Sbjct: 151 VLEDEYNP 158


>sp|GATD_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus vannielii (strain ATCC

Query: 4 NEYNPLN 10
NE+ PLN
Sbjct: 68 NEFKPLN 74


>sp|PSB1_SACI9|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain L.D.8.5 /

Query: 1 VVTNEYNP 8
V+ +EYNP
Sbjct: 154 VLEDEYNP 161


>sp|PSB1_SACI7|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VVTNEYNP 8
V+ +EYNP
Sbjct: 154 VLEDEYNP 161


>sp|PSB1_SACI6|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VVTNEYNP 8
V+ +EYNP
Sbjct: 154 VLEDEYNP 161


>sp|PSB1_SACI4|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VVTNEYNP 8
V+ +EYNP
Sbjct: 154 VLEDEYNP 161


>sp|PSB1_SACI3|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain M.16.27)

Query: 1 VVTNEYNP 8
V+ +EYNP
Sbjct: 154 VLEDEYNP 161


>sp|PSB1_SACI2|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VVTNEYNP 8
V+ +EYNP
Sbjct: 154 VLEDEYNP 161


>sp|PSB2_SACI1|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VVTNEYNP 8
V+ +EYNP
Sbjct: 154 VLEDEYNP 161




210|SequenceR|1055|1046|SSLSFVVTNE

>sp|GATD_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C5 /

Query: 1 SSLSFVVTNE 10
S+LSF+VT+E
Sbjct: 168 SALSFMVTSE 177


>sp|GATD_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C6 /

Query: 1 SSLSFVVTNE 10
S+LSF+VT+E
Sbjct: 168 SALSFMVTSE 177


>sp|XACH_HALVD|XYLOSE/ARABINOSE import permease protein XacH|Haloferax volcanii (strain ATCC 29605

Query: 2 SLSFVVTNE 10
SLSFVVT +
Sbjct: 138 SLSFVVTAQ 146




211|SequenceR|1060|1051|ILYQFSSLSF

>sp|DIPPS_ARCFU|BIFUNCTIONAL IPC transferase and DIPP|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILYQFSSL 8
+LYQFSS+
Sbjct: 348 LLYQFSSI 355


>sp|KDPA_METB6|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Methanoregula boonei (strain DSM

Query: 1 ILYQFSSLS 9
ILY FSS+S
Sbjct: 475 ILYAFSSVS 483




212|SequenceR|1065|1056|VAAALILYQF

>sp|Y1137_METJA|UNCHARACTERIZED protein MJ1137|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VAAALILYQF 10
++A+LILY F
Sbjct: 131 ISASLILYPF 140


>sp|RCE1_METMP|CAAX prenyl protease 2|Methanococcus maripaludis (strain DSM 14266

Query: 1 VAAALILYQ 9
VAAA+ILY
Sbjct: 254 VAAAIILYD 262




213|SequenceR|1070|1061|PAGKSVAAAL

>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 GKSVAAAL 10
GKS+AAAL
Sbjct: 398 GKSIAAAL 405


>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PAGKSVAAA 9
P+G S+AAA
Sbjct: 216 PSGSSIAAA 224




214|SequenceR|1075|1066|LPRRFPAGKS

>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 LPRRFP 6
LPRRFP
Sbjct: 32 LPRRFP 37


>sp|Y665_METMP|UPF0305 protein MMP0665|Methanococcus maripaludis (strain DSM 14266

Query: 1 LPRRFPAGK 9
L RFP GK
Sbjct: 119 LTTRFPGGK 127


>sp|Y221_METM6|UPF0305 protein MmarC6_0221|Methanococcus maripaludis (strain C6 /

Query: 1 LPRRFPAGK 9
L RFP GK
Sbjct: 119 LTTRFPGGK 127


>sp|Y1691_METM7|UPF0305 protein MmarC7_1691|Methanococcus maripaludis (strain C7 /

Query: 1 LPRRFPAGK 9
L RFP GK
Sbjct: 119 LTTRFPGGK 127


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPRRFPAG 8
LP+ FP G
Sbjct: 236 LPKHFPRG 243


>sp|Y909_METM5|UPF0305 protein MmarC5_0909|Methanococcus maripaludis (strain C5 /

Query: 1 LPRRFPAGK 9
L RFP GK
Sbjct: 119 LTTRFPGGK 127




215|SequenceR|1080|1071|PVNTYLPRRF

>sp|TOP6A_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VNTYLPRR 9
VNTYLP +
Sbjct: 353 VNTYLPEK 360


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 2 VNTYLPR 8
++TYLPR
Sbjct: 72 IDTYLPR 78


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 2 VNTYLPR 8
++TYLPR
Sbjct: 72 IDTYLPR 78


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain

Query: 2 VNTYLPR 8
++TYLPR
Sbjct: 72 IDTYLPR 78


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 2 VNTYLPRRF 10
V+TYLP +
Sbjct: 339 VDTYLPEKL 347


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 2 VNTYLPRRF 10
VN Y+P+ F
Sbjct: 170 VNEYIPKPF 178


>sp|RPO3_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermococcus kodakarensis (strain ATCC

Query: 5 YLPRRF 10
YLPR+F
Sbjct: 198 YLPRKF 203


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 1 PVNTYLP 7
PV+TY P
Sbjct: 502 PVDTYCP 508




216|SequenceR|1085|1076|LAVLFPVNTY

>sp|RIFK_METST|RIBOFLAVIN kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 AVLFPVNT 9
A+LFPV T
Sbjct: 91 AILFPVKT 98


>sp|RIFK_METTH|RIBOFLAVIN kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 AVLFPVNTY 10
A+LFP+ T+
Sbjct: 77 AILFPLKTH 85


>sp|Y961_METJA|MCM-LIKE protein MJ0961|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LAVLFPVNTY 10
+A LFP N Y
Sbjct: 397 IARLFPQNAY 406


>sp|PRPB_AERPE|2-METHYLISOCITRATE lyase|Aeropyrum pernix (strain ATCC 700893

Query: 3 VLFPVNTY 10
V+FPV T+
Sbjct: 235 VIFPVTTF 242


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 VLFPVN 8
VLFP+N
Sbjct: 608 VLFPIN 613


>sp|THIO_ARCFU|PROBABLE Thioredoxin|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LAVLFPVNT 9
LA+ PVNT
Sbjct: 32 LAINLPVNT 40




217|SequenceR|1090|1081|SSLLALAVLF

***** No hits found ******


218|SequenceR|1095|1086|LGVLVSSLLA

***** No hits found ******


219|SequenceR|1100|1091|GPVLVLGVLV

>sp|RNH2_METTH|RIBONUCLEASE HII|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GPVLVLGVLV 10
GP++V GV++
Sbjct: 16 GPLVVAGVMI 25


>sp|RNH2_METLZ|RIBONUCLEASE HII|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GPVLVLGVLV 10
GP++ GVLV
Sbjct: 16 GPMITAGVLV 25


>sp|RNH2_METAR|RIBONUCLEASE HII|Methanocella arvoryzae (strain DSM 22066

Query: 1 GPVLVLGVLV 10
GP++V G++V
Sbjct: 22 GPLVVCGIIV 31


>sp|RNH2_METS3|RIBONUCLEASE HII|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GPVLVLGVLV 10
GP+++ GV+V
Sbjct: 16 GPLVIAGVIV 25


>sp|SPSS_METBF|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GPVLVLGV 8
GPV VLGV
Sbjct: 228 GPVGVLGV 235


>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 1 GPVLVLGV 8
GPV VLGV
Sbjct: 227 GPVGVLGV 234


>sp|RNH2_METKA|RIBONUCLEASE HII|Methanopyrus kandleri (strain AV19 /

Query: 1 GPVLVLGVL 9
GP++V GVL
Sbjct: 17 GPMVVAGVL 25


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GPVLVLGV 8
GP+ VLGV
Sbjct: 724 GPIRVLGV 731


>sp|SPSS_METMA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GPVLVLGV 8
GPV VLGV
Sbjct: 228 GPVGVLGV 235


>sp|SPSS_METAC|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GPVLVLGV 8
GPV VLGV
Sbjct: 228 GPVGVLGV 235


>sp|SPSS2_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanococcoides burtonii (strain DSM 6242

Query: 1 GPVLVLGV 8
GP+ VLGV
Sbjct: 228 GPIGVLGV 235


>sp|RNH2_SACS2|RIBONUCLEASE HII|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GPVLVLGVLV 10
GP++V GV++
Sbjct: 15 GPMIVAGVVI 24


>sp|THIC_PYRAB|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 GPVLVLGVLV 10
PV VLG LV
Sbjct: 289 APVYVLGPLV 298




220|SequenceR|1105|1096|PGQLLGPVLV

>sp|HMD_METKA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 PGQLLGPV 8
PG LLGPV
Sbjct: 253 PGYLLGPV 260


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PGQLLGPV 8
PG+LL PV
Sbjct: 169 PGELLNPV 176


>sp|AGMT_PYRHO|AGMATINASE horikoshii (strain ATCC 700860

Query: 1 PGQLLGPVLV 10
PG GPVL+
Sbjct: 38 PGARFGPVLI 47


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PGQLLGPV 8
PGQ+LG V
Sbjct: 129 PGQILGTV 136


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus

Query: 2 GQLLGP 7
GQLLGP
Sbjct: 83 GQLLGP 88


>sp|RL1_CENSY|LARGE ribosomal subunit protein uL1|Cenarchaeum symbiosum (strain A)

Query: 2 GQLLGP 7
GQ+LGP
Sbjct: 119 GQILGP 124


>sp|YHMF_METFE|UNCHARACTERIZED 32.2 kDa protein in|Methanothermus fervidus

Query: 1 PGQLLGPVLV 10
PG GP+++
Sbjct: 38 PGSRFGPLMI 47


>sp|RL1_METKA|LARGE ribosomal subunit protein uL1|Methanopyrus kandleri (strain AV19 /

Query: 2 GQLLGPVL 9
G++LGPVL
Sbjct: 118 GRVLGPVL 125


>sp|PSA_METS5|PROTEASOME subunit alpha|Metallosphaera sedula (strain ATCC 51363

Query: 1 PGQLLGP 7
PG+ LGP
Sbjct: 205 PGEKLGP 211




221|SequenceR|1110|1101|NRLALPGQLL

>sp|HACA_METMA|PROBABLE methanogen homoaconitase large subunit|Methanosarcina mazei

Query: 1 NRLALPGQLL 10
N ALPG+LL
Sbjct: 85 NGFALPGKLL 94


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RLALPGQLL 10
R A+PGQ++
Sbjct: 107 RYAMPGQVI 115


>sp|RRP4_METBU|EXOSOME complex component Rrp4|Methanococcoides burtonii (strain DSM 6242

Query: 2 RLALPGQLL 10
++ +PGQLL
Sbjct: 4 KIVIPGQLL 12


>sp|HACA_METAC|PROBABLE methanogen homoaconitase large subunit|Methanosarcina acetivorans

Query: 1 NRLALPGQLL 10
N ALPG+L+
Sbjct: 118 NGFALPGKLV 127


>sp|NAT_SULTO|N-ALPHA-ACETYLTRANSFERASE tokodaii (strain DSM 16993

Query: 1 NRLALP 6
NRLALP
Sbjct: 29 NRLALP 34


>sp|LEUC_PYRAE|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RLALPGQLL 10
+ ALPGQ++
Sbjct: 107 KYALPGQVI 115


>sp|NIKR3_METMA|PUTATIVE nickel-responsive regulator 3|Methanosarcina mazei (strain ATCC

Query: 3 LALPGQLL 10
++LPG+LL
Sbjct: 10 ISLPGELL 17




222|SequenceR|1115|1106|GTDTINRLAL

>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 2 TDTINRLAL 10
T+T+ R+AL
Sbjct: 128 TETVTRMAL 136


>sp|PELO_CALMQ|PROTEIN pelota homolog|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GTDTINRL 8
G DT+NR+
Sbjct: 246 GYDTVNRI 253




223|SequenceR|1120|1111|LLLKFGTDTI

>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LLLKFGTDTI 10
+LLK+G D +
Sbjct: 84 ILLKYGADAV 93


>sp|XPF_SACS2|3'-FLAP repair endonuclease Xpf|Saccharolobus solfataricus (strain ATCC

Query: 1 LLLKFGT 7
LLLKFGT
Sbjct: 175 LLLKFGT 181


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LLLKFGTDTI 10
LL K+G DT+
Sbjct: 531 LLEKYGADTL 540


>sp|METK_NATPD|S-ADENOSYLMETHIONINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LLKFGTDTI 10
L+FGTD +
Sbjct: 123 FLEFGTDVV 131


>sp|NTPPA_PYRFU|DTTP/UTP pyrophosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LLLKFGTDTI 10
L +KF TDTI
Sbjct: 55 LAVKFPTDTI 64


>sp|CPGS_METTH|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermobacter

Query: 1 LLLKFGTDTI 10
L+ K+G DT+
Sbjct: 82 LIRKYGADTV 91


>sp|PDXS_THEVO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermoplasma volcanium (strain

Query: 3 LKFGTDTI 10
LKFGT+ I
Sbjct: 8 LKFGTELI 15


>sp|PDXS_ARCFU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Archaeoglobus fulgidus (strain

Query: 3 LKFGTDTI 10
LKFGT+ I
Sbjct: 8 LKFGTELI 15


>sp|BTUDA_HALSA|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 4 KFGTDT 9
+FGTDT
Sbjct: 107 RFGTDT 112


>sp|BTUDA_HALS3|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 4 KFGTDT 9
+FGTDT
Sbjct: 107 RFGTDT 112


>sp|Y1520_METJA|UNCHARACTERIZED protein MJ1520|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLLKFGTDTI 10
L LK G DT+
Sbjct: 329 LFLKLGNDTL 338


>sp|THIC_PYRFU|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LLLKFGTDTI 10
+ +K+G DTI
Sbjct: 85 IAVKYGADTI 94


>sp|THIC_THEKO|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LKFGTDTI 10
+K+G DTI
Sbjct: 87 VKYGADTI 94


>sp|THIC_THEGJ|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 LKFGTDTI 10
+K+G DTI
Sbjct: 87 VKYGADTI 94


>sp|THIC_PYRAB|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 LKFGTDTI 10
+K+G DTI
Sbjct: 87 VKYGADTI 94


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 KFGTDTI 10
KFG DT+
Sbjct: 613 KFGADTL 619


>sp|RADA_PICTO|DNA repair and recombination protein|Picrophilus torridus (strain ATCC

Query: 2 LLKFGT 7
LLKFGT
Sbjct: 239 LLKFGT 244


>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLKFGTDTI 10
L K+G DTI
Sbjct: 182 LKKYGIDTI 190


>sp|FAEHP_METMA|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LLLKFGTDTI 10
L+ ++GTD I
Sbjct: 208 LIKRYGTDVI 217




224|SequenceR|1125|1116|TVLGLLLLKF

>sp|WTPA_PYRHO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VLGLLLLKF 10
+LG+LLL F
Sbjct: 7 ILGILLLSF 15




225|SequenceR|1130|1121|GVFNLTVLGL

>sp|FLAK_HALMA|PREFLAGELLIN peptidase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GVFNLTVL 8
GVF+LTVL
Sbjct: 127 GVFSLTVL 134


>sp|METK_PYRNV|S-ADENOSYLMETHIONINE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GVFNLTVLG 9
G+F LTV G
Sbjct: 266 GIFYLTVTG 274


>sp|METK_PYRIL|S-ADENOSYLMETHIONINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GVFNLTVLG 9
G+F LTV G
Sbjct: 266 GIFYLTVTG 274


>sp|METK_PYRAE|S-ADENOSYLMETHIONINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GVFNLTVLG 9
G+F LTV G
Sbjct: 266 GIFYLTVTG 274


>sp|LADH_METVS|LACTALDEHYDE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GVFNLT 6
GVFNLT
Sbjct: 191 GVFNLT 196


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC

Query: 2 VFNLTVLGL 10
V NLT+LG+
Sbjct: 58 VANLTILGV 66




226|SequenceR|1135|1126|ELMFAGVFNL

***** No hits found ******


227|SequenceR|1140|1131|QDLVSELMFA

>sp|RNP2_METBF|RIBONUCLEASE P protein component 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 DLVSELMFA 10
DLV E+MF+
Sbjct: 29 DLVKEVMFS 37


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 1 QDLVSELMFA 10
+DLV EL+F
Sbjct: 921 EDLVGELVFG 930


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 2 DLVSELMFA 10
DLV EL+F
Sbjct: 882 DLVGELVFG 890


>sp|SYT_METTH|THREONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 DLVSELMFA 10
DLVSEL+ A
Sbjct: 511 DLVSELIAA 519




228|SequenceR|1145|1136|CAPLCQDLVS

>sp|GATB_HALSA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Halobacterium salinarum (strain ATCC

Query: 2 APLCQD 7
AP+CQD
Sbjct: 105 APICQD 110


>sp|G1PDH_METB6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoregula boonei (strain DSM 21154

Query: 2 APLCQDL 8
AP+C+DL
Sbjct: 37 APVCEDL 43


>sp|TTDA_METJA|PUTATIVE L(+)-tartrate dehydratase subunit alpha|Methanocaldococcus

Query: 3 PLCQD 7
PLCQD
Sbjct: 58 PLCQD 62




229|SequenceR|1150|1141|RLRRLCAPLC

>sp|RFCL_METLZ|REPLICATION factor C large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 2 LRRLCAPL 9
+RRLC P+
Sbjct: 144 IRRLCDPV 151


>sp|RFCL_METMJ|REPLICATION factor C large subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RLRRLCA 7
RLR++CA
Sbjct: 164 RLRQICA 170


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 4 RLCAPLC 10
+LC P C
Sbjct: 440 KLCGPAC 446


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 RLCAPLC 10
+LC P C
Sbjct: 417 KLCGPAC 423


>sp|CAS4_AERPE|CRISPR-ASSOCIATED exonuclease Cas4|Aeropyrum pernix (strain ATCC 700893

Query: 1 RLRRLCAP 8
R RR+C P
Sbjct: 183 RFRRVCQP 190




230|SequenceR|1155|1146|SARKPRLRRL

>sp|ATGT_HALMA|TRNA-GUANINE(15) transglycosylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SARKPRLRR 9
SAR+P +RR
Sbjct: 373 SARRPEVRR 381


>sp|APGM1_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Archaeoglobus fulgidus (strain ATCC

Query: 2 ARKPRLRRL 10
ARKP L RL
Sbjct: 25 ARKPNLDRL 33


>sp|RPO11_THESM|DNA-DIRECTED RNA polymerase subunit Rpo11|Thermococcus sibiricus (strain DSM

Query: 2 ARKPRLR 8
ARKPR R
Sbjct: 52 ARKPRFR 58


>sp|AATE_AERPE|A-TYPE ATP synthase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 1 SARKPRLRR 9
+A +PRLRR
Sbjct: 183 AAEEPRLRR 191


>sp|RPO11_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo11|Pyrococcus furiosus (strain ATCC

Query: 2 ARKPRLR 8
ARKPR R
Sbjct: 52 ARKPRFR 58


>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 ARKPRLRRL 10
ARKPR+R +
Sbjct: 124 ARKPRVRAI 132


>sp|RPO11_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo11|Pyrococcus abyssi (strain GE5 /

Query: 2 ARKPRLR 8
ARKPR R
Sbjct: 52 ARKPRFR 58


>sp|RPO11_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo11|Pyrococcus horikoshii (strain ATCC

Query: 2 ARKPRLR 8
ARKPR R
Sbjct: 52 ARKPRFR 58




231|SequenceR|1160|1151|KFRKKSARKP

>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 RKKSARKP 10
RKK AR+P
Sbjct: 14 RKKLAREP 21




232|SequenceR|1165|1156|ERELQKFRKK

>sp|IF6_METVS|TRANSLATION initiation factor 6|Methanococcus vannielii (strain ATCC 35089

Query: 3 ELQKFRK 9
ELQ FRK
Sbjct: 121 ELQNFRK 127


>sp|HEM1_THEVO|GLUTAMYL-TRNA reductase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 ELQKFRK 9
E+QKFRK
Sbjct: 320 EIQKFRK 326


>sp|RNZ_METVS|RIBONUCLEASE Z|Methanococcus vannielii (strain ATCC 35089

Query: 1 ERELQKFRKK 10
ER++ KF++K
Sbjct: 288 ERDIVKFKEK 297


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ERELQKFRKK 10
+RE++KF++K
Sbjct: 278 QREIEKFKRK 287


Query: 2 RELQKFRKK 10
R L+KFR+K
Sbjct: 1307 RSLEKFREK 1315


>sp|RL10_STAMF|LARGE ribosomal subunit protein uL10|Staphylothermus marinus (strain

Query: 3 ELQKFRKK 10
+LQK RKK
Sbjct: 45 QLQKLRKK 52




233|SequenceR|1170|1161|PQEALERELQ

>sp|MFNA_PYRFU|PROBABLE L-aspartate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PQEALERELQ 10
PQE + REL+
Sbjct: 9 PQEEVMRELE 18


>sp|TRPB2_SACS2|TRYPTOPHAN synthase beta chain 2|Saccharolobus solfataricus (strain ATCC

Query: 1 PQEALERELQ 10
P E LER LQ
Sbjct: 65 PDEVLERYLQ 74


>sp|TRPB2_SULTO|TRYPTOPHAN synthase beta chain 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PQEALERELQ 10
P+E L+R LQ
Sbjct: 65 PEEVLQRYLQ 74


>sp|GSA_METMJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 QEALERELQ 10
+EA+ER+L+
Sbjct: 68 REAIERQLE 76


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PQEALER 7
PQE LER
Sbjct: 518 PQEELER 524


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PQEALER 7
PQE LER
Sbjct: 518 PQEELER 524


>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 3 EALERELQ 10
EA+EREL+
Sbjct: 59 EAMERELE 66


>sp|GGGPS_METS3|GERANYLGERANYLGLYCERYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PQEALE 6
PQEALE
Sbjct: 29 PQEALE 34


>sp|6PGD_HALVD|6-PHOSPHOGLUCONATE dehydrogenase, NAD(+)-dependent, decarboxylating|Haloferax volcanii

Query: 2 QEALEREL 9
QEALE+E+
Sbjct: 249 QEALEQEV 256


>sp|Y774_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0774|Methanocaldococcus

Query: 1 PQEALERELQ 10
P+E +ER+L+
Sbjct: 156 PRERIERDLE 165


>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PQEALERELQ 10
P E LER +Q
Sbjct: 62 PDEILERYMQ 71




234|SequenceR|1180|1166|RLPGAPLPPWPQEAL

>sp|AMASY_HALMA|APPARENT malate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PGAPLPPWPQ 12
P LPPWP+
Sbjct: 203 PTGELPPWPE 212


>sp|PUS10_THEPD|TRNA pseudouridine synthase Pus10|Thermofilum pendens (strain DSM 2475

Query: 4 GAPLPPWPQ 12
G P PWPQ
Sbjct: 220 GLPQNPWPQ 228


>sp|Y1237_ARCFU|UNCHARACTERIZED protein AF_1237|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GAPLPPWPQEA 14
G LPP PQE+
Sbjct: 148 GMGLPPSPQES 158


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 453 RFWGTPLPAW 462


>sp|Y1446_ARCFU|UNCHARACTERIZED protein AF_1446|Archaeoglobus fulgidus (strain ATCC 49558

Query: 7 LPPWP 11
LPPWP
Sbjct: 80 LPPWP 84


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 456 RFWGTPLPIW 465


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 396 RFWGTPLPIW 405


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 459 RFWGTPLPIW 468


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 459 RFWGTPLPIW 468


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 453 RFWGTPLPVW 462


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 PLPPWPQEAL 15
P+P W +E L
Sbjct: 97 PVPSWAKEKL 106


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 APLPPWPQE 13
AP PWPQE
Sbjct: 354 APETPWPQE 362


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 456 RFWGTPLPIW 465


>sp|ARLY_METTH|ARGININOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 RLPGAPLP 8
R+PG P P
Sbjct: 442 RIPGGPAP 449


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 PLPPWPQEAL 15
PLPP+ E +
Sbjct: 770 PLPPYTTETM 779


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PGAPLPPWPQEAL 15
P P+PP P A+
Sbjct: 526 PSGPIPPTPTLAM 538


>sp|ARLY_METHJ|ARGININOSUCCINATE lyase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RLPGAPLPPWPQEAL 15
+LPG P P +AL
Sbjct: 441 KLPGGPAPDAVLDAL 455


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 453 RYWGTPLPIW 462


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RLPGAPLPPWPQE 13
R G PLP W E
Sbjct: 465 RYWGIPLPIWQSE 477


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RLPGAPLPPW 10
R+ G PLP W
Sbjct: 445 RIYGTPLPFW 454


>sp|ENGB_METMP|PROBABLE GTP-binding protein EngB|Methanococcus maripaludis (strain DSM

Query: 7 LPPWPQ 12
LPPW Q
Sbjct: 190 LPPWRQ 195


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RLPGAPLPPWPQE 13
R G PLP W E
Sbjct: 465 RYWGIPLPIWQSE 477


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PGAPLPPW 10
PG P PP+
Sbjct: 510 PGRPSPPF 517


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PGAPLPPW 10
PG P PP+
Sbjct: 510 PGRPSPPF 517


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RLPGAPLPPWPQE 13
R G PLP W E
Sbjct: 465 RYWGIPLPIWESE 477


>sp|TIAS_CENSY|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Cenarchaeum symbiosum (strain

Query: 4 GAPLPPWPQE 13
G P P WP++
Sbjct: 178 GTPRPIWPED 187


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 RLPGAPLPPWPQE 13
R G PLP W E
Sbjct: 465 RYWGIPLPIWQSE 477


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PGAPLPPW 10
PG P PP+
Sbjct: 510 PGRPSPPF 517


>sp|RAD50_AERPE|DNA double-strand break repair Rad50|Aeropyrum pernix (strain ATCC

Query: 4 GAPLPPWPQEAL 15
GA LPP EA+
Sbjct: 468 GAELPPGRAEAI 479


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PGAPLPPW 10
PG P PP+
Sbjct: 510 PGRPSPPF 517


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 APLPPWPQEAL 15
PLPP+ + L
Sbjct: 925 GPLPPYTTDTL 935


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 APLPPWPQEAL 15
PLPP+ + L
Sbjct: 925 GPLPPYTTDTL 935


>sp|RS9_PYRAE|SMALL ribosomal subunit protein uS9|Pyrobaculum aerophilum (strain ATCC

Query: 1 RLPGAPLPPWPQE 13
R+ G PL WP E
Sbjct: 37 RINGYPLELWPIE 49


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 5 APLPPWPQEAL 15
+PLPP+ + L
Sbjct: 863 SPLPPFTTDTL 873


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 APLPPWPQEAL 15
+PLPP+ + L
Sbjct: 863 SPLPPFTTDTL 873


>sp|COBS_METBF|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina barkeri (strain Fusaro /

Query: 4 GAPLPPWPQEA 14
G P+PP ++A
Sbjct: 169 GKPIPPREKQA 179


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 465 RYWGIPLPIW 474


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RLPGAPLPPW 10
R+ G PLP W
Sbjct: 437 RVYGTPLPFW 446


>sp|CBID_PYRAE|COBALT-PRECORRIN-5B C(1)-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PGAPLPP 9
PG P+PP
Sbjct: 103 PGLPVPP 109


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 470 RYWGIPLPIW 479


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RLPGAPLPPW 10
R+ G PLP W
Sbjct: 462 RVWGTPLPVW 471


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 5 APLPPWPQEAL 15
AP+P P E L
Sbjct: 168 APIPKSPYEVL 178


>sp|RL10_SULTO|LARGE ribosomal subunit protein uL10|Sulfurisphaera tokodaii (strain DSM

Query: 3 PGAPLPP 9
PG P+PP
Sbjct: 165 PGDPIPP 171


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 GAPLPPWPQE 13
GAP WPQE
Sbjct: 351 GAPEVLWPQE 360


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RLPGAPLPPW 10
R+ G PLP W
Sbjct: 419 RVYGTPLPFW 428


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 3 PGAPLPPW 10
PG LP W
Sbjct: 462 PGDALPDW 469


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 4 GAPLPPWPQE 13
GAP WPQE
Sbjct: 351 GAPEILWPQE 360


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 7 LPPWPQEAL 15
+PP P+E L
Sbjct: 227 IPPMPKEVL 235


>sp|ENDAL_METKA|ENDA-LIKE protein|Methanopyrus kandleri (strain AV19 /

Query: 10 WPQEAL 15
WP+EAL
Sbjct: 39 WPEEAL 44


>sp|DNLI_ARCFU|DNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPGAPLPPWPQEAL 15
+ G PPW + L
Sbjct: 46 ITGKVYPPWDEREL 59


>sp|LEU1_IGNH4|PROBABLE 2-isopropylmalate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RLPGAPLPP 9
++ G P+PP
Sbjct: 280 KITGIPIPP 288


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PGAPLPPW 10
PG P PP+
Sbjct: 514 PGRPSPPF 521


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 PGAPLPPW 10
PG P PP+
Sbjct: 515 PGDPSPPF 522


>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 457 RYWGIPLPIW 466


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 5 APLPPWPQEAL 15
P+PP P AL
Sbjct: 528 GPIPPTPTLAL 538


>sp|SURE_HALWD|5'-NUCLEOTIDASE SurE|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LPGAPLPPWPQEA 14
+PG PW ++A
Sbjct: 127 IPGGGDTPWHKQA 139


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 5 APLPPWPQEAL 15
P+PP P AL
Sbjct: 537 GPIPPTPTLAL 547


>sp|RRP42_METAR|EXOSOME complex component Rrp42|Methanocella arvoryzae (strain DSM 22066

Query: 3 PGAPLPPWPQEAL 15
PG P P P +
Sbjct: 66 PGEPFPDTPDSGV 78


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 458 RYWGIPLPVW 467


>sp|METE_SULTO|METHIONINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 6 PLPPWPQEAL 15
P P W +EA+
Sbjct: 16 PRPKWLREAI 25


>sp|RRP4_AERPE|EXOSOME complex component Rrp4|Aeropyrum pernix (strain ATCC 700893

Query: 2 LPGAPLP 8
+PG PLP
Sbjct: 13 VPGEPLP 19


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 5 APLPPWPQEA 14
APL WP A
Sbjct: 115 APLNSWPDNA 124


>sp|RASEA_THEKO|ARCHAEOSINE synthase subunit beta|Thermococcus kodakarensis (strain ATCC

Query: 4 GAPLPPWPQEAL 15
AP W QEA+
Sbjct: 44 AAPKVKWTQEAI 55


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 RLPGAPLPPWPQE 13
R G PLP W E
Sbjct: 474 RYWGIPLPVWECE 486


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RLPGAPLPPWPQE 13
R G P+P W E
Sbjct: 462 RYWGIPVPIWTPE 474




235|SequenceR|1180|1171|RLPGAPLPPW

>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 453 RFWGTPLPAW 462


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 456 RFWGTPLPIW 465


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 396 RFWGTPLPIW 405


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 459 RFWGTPLPIW 468


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 459 RFWGTPLPIW 468


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 453 RFWGTPLPVW 462


>sp|ARLY_METTH|ARGININOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 RLPGAPLP 8
R+PG P P
Sbjct: 442 RIPGGPAP 449


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 456 RFWGTPLPIW 465


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 453 RYWGTPLPIW 462


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RLPGAPLPPW 10
R+ G PLP W
Sbjct: 445 RIYGTPLPFW 454


>sp|ARLY_METHJ|ARGININOSUCCINATE lyase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RLPGAPLP 8
+LPG P P
Sbjct: 441 KLPGGPAP 448


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PGAPLPPW 10
PG P PP+
Sbjct: 510 PGRPSPPF 517


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PGAPLPPW 10
PG P PP+
Sbjct: 510 PGRPSPPF 517


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PGAPLPPW 10
PG P PP+
Sbjct: 510 PGRPSPPF 517


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PGAPLPPW 10
PG P PP+
Sbjct: 510 PGRPSPPF 517


>sp|RL10_SULTO|LARGE ribosomal subunit protein uL10|Sulfurisphaera tokodaii (strain DSM

Query: 3 PGAPLPP 9
PG P+PP
Sbjct: 165 PGDPIPP 171


>sp|CBID_PYRAE|COBALT-PRECORRIN-5B C(1)-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PGAPLPP 9
PG P+PP
Sbjct: 103 PGLPVPP 109


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 465 RYWGIPLPIW 474


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 470 RYWGIPLPIW 479


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RLPGAPLPPW 10
R+ G PLP W
Sbjct: 437 RVYGTPLPFW 446


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RLPGAPLPPW 10
R+ G PLP W
Sbjct: 462 RVWGTPLPVW 471


>sp|LEU1_PYRAE|PROBABLE 2-isopropylmalate synthase|Pyrobaculum aerophilum (strain ATCC

Query: 1 RLPGAPLPP 9
+L G P+PP
Sbjct: 268 KLFGVPVPP 276


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 3 PGAPLPPW 10
PG LP W
Sbjct: 462 PGDALPDW 469


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RLPGAPLPPW 10
R+ G PLP W
Sbjct: 419 RVYGTPLPFW 428


>sp|LEU1_IGNH4|PROBABLE 2-isopropylmalate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RLPGAPLPP 9
++ G P+PP
Sbjct: 280 KITGIPIPP 288


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PGAPLPPW 10
PG P PP+
Sbjct: 514 PGRPSPPF 521


>sp|ARLY_METMA|ARGININOSUCCINATE lyase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RLPGAPLP 8
++PG P P
Sbjct: 439 KIPGGPAP 446


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 PGAPLPPW 10
PG P PP+
Sbjct: 515 PGDPSPPF 522


>sp|Y1815_ARCFU|UNCHARACTERIZED aminotransferase AF_1815|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GAPLPP 9
G PLPP
Sbjct: 204 GMPLPP 209


>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 457 RYWGIPLPIW 466


>sp|METK_HYPBU|S-ADENOSYLMETHIONINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 3 PGAPLP 8
PG PLP
Sbjct: 371 PGEPLP 376


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RLPGAPLPPW 10
R G P+P W
Sbjct: 465 RYWGIPIPVW 474


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RLPGAPLPPW 10
R G P P W
Sbjct: 396 RYYGVPFPVW 405


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 465 RYWGIPLPIW 474


>sp|RRP4_AERPE|EXOSOME complex component Rrp4|Aeropyrum pernix (strain ATCC 700893

Query: 2 LPGAPLP 8
+PG PLP
Sbjct: 13 VPGEPLP 19


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 465 RYWGIPLPIW 474


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RLPGAPLPPW 10
R G P P W
Sbjct: 396 RYYGVPFPVW 405


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 465 RYWGIPLPIW 474


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 465 RYWGIPLPIW 474


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 458 RYWGIPLPVW 467


>sp|DPO4_HALSA|DNA polymerase IV|Halobacterium salinarum (strain ATCC 700922

Query: 1 RLPGAP 6
RLPGAP
Sbjct: 6 RLPGAP 11


>sp|DPO4_HALS3|DNA polymerase IV|Halobacterium salinarum (strain ATCC 29341

Query: 1 RLPGAP 6
RLPGAP
Sbjct: 6 RLPGAP 11


>sp|RL10E_SULAC|LARGE ribosomal subunit protein uL16|Sulfolobus acidocaldarius (strain

Query: 2 LPGAPLP 8
+PG P+P
Sbjct: 23 IPGIPMP 29


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 RLPGAPLPPW 10
R G P+P W
Sbjct: 458 RYWGIPIPVW 467


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 465 RYWGIPLPVW 474


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LPGAPLPP 9
LPG+ PP
Sbjct: 215 LPGSSAPP 222


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 474 RYWGIPLPVW 483


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RLPGAPLPPW 10
R G P+P W
Sbjct: 452 RYWGIPIPVW 461


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RLPGAPLPPW 10
R G PLP W
Sbjct: 459 RYWGIPLPIW 468


>sp|UDGB_PYRAE|TYPE-5 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 GAPLPPW 10
G P+PPW
Sbjct: 49 GRPVPPW 55


>sp|RL10E_SULTO|LARGE ribosomal subunit protein uL16|Sulfurisphaera tokodaii (strain

Query: 2 LPGAPLP 8
+PG P+P
Sbjct: 23 IPGVPMP 29


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RLPGAPLPPW 10
R G P+P W
Sbjct: 437 RDSGIPIPVW 446


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RLPGAPLPPW 10
R G P+P W
Sbjct: 454 RYWGIPIPVW 463


>sp|NNR_HYPBU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Hyperthermus butylicus (strain

Query: 2 LPGAPLPPW 10
L GAP PP+
Sbjct: 142 LRGAPRPPY 150


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RLPGAPLPPW 10
R G P+P W
Sbjct: 458 RYWGMPIPVW 467


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RLPGAPLPPW 10
R+ G P+P W
Sbjct: 402 RVFGTPIPFW 411


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 RLPGAPLPPW 10
R G P+P W
Sbjct: 454 RYWGIPIPVW 463




THE END