1|Sequence|1|10|MALSVDSSWH
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 LSVDSSW 9
+SVDS+W
Sbjct: 4136 ISVDSNW 4142
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 LSVDSSW 9
+SVDS+W
Sbjct: 4156 ISVDSNW 4162
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 LSVDSSW 9
+SVDS+W
Sbjct: 4186 ISVDSNW 4192
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 LSVDSSW 9
+SVDS+W
Sbjct: 4156 ISVDSNW 4162
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 LSVDSSW 9
+SVDS+W
Sbjct: 4136 ISVDSNW 4142
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 LSVDSSW 9
+SVDS+W
Sbjct: 4186 ISVDSNW 4192
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 ALSVDSSWH 10
A VD++W
Sbjct: 293 AFKVDANWQ 301
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LSVDSSW 9
++VD+SW
Sbjct: 356 VTVDASW 362
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MALSVDSSW 9
+ L+VD+ W
Sbjct: 157 VGLAVDTPW 165
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MALSVDSSW 9
+ L+VD+ W
Sbjct: 632 VGLAVDTPW 640
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MALSVDSSW 9
+ L+VD+ W
Sbjct: 653 VGLAVDTPW 661
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MALSVDSSW 9
+ L+VD+ W
Sbjct: 653 VGLAVDTPW 661
Query: 3 LSVDSSW 9
L+VD +W
Sbjct: 1674 LTVDQAW 1680
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MALSVDSSW 9
+ L+VD+ W
Sbjct: 653 VGLAVDTPW 661
Query: 3 LSVDSSW 9
L+VD +W
Sbjct: 1674 LTVDQAW 1680
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MALSVDSSW 9
+ L+VD+ W
Sbjct: 653 VGLAVDTPW 661
Query: 3 LSVDSSW 9
L+VD +W
Sbjct: 1674 LTVDQAW 1680
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MALSVDSSW 9
+ L+VD+ W
Sbjct: 647 VGLAVDTPW 655
Query: 3 LSVDSSW 9
L+VD +W
Sbjct: 1508 LTVDQAW 1514
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MALSVDSSW 9
+ L+VD+ W
Sbjct: 653 VGLAVDTPW 661
Query: 3 LSVDSSW 9
L+VD +W
Sbjct: 1674 LTVDQAW 1680
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MALSVDSSW 9
+ L+VD+ W
Sbjct: 653 VGLAVDTPW 661
Query: 3 LSVDSSW 9
L+VD +W
Sbjct: 1674 LTVDQAW 1680
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MALSVDSSW 9
+ L+VD+ W
Sbjct: 653 VGLAVDTPW 661
Query: 3 LSVDSSW 9
L+VD +W
Sbjct: 1674 LTVDQAW 1680
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LSVDSSW 9
L+VD +W
Sbjct: 1674 LTVDQAW 1680
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MALSVDSSW 9
+ L+VD+ W
Sbjct: 653 VGLAVDTPW 661
Query: 3 LSVDSSW 9
L+VD +W
Sbjct: 1674 LTVDQAW 1680
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MALSVDSSW 9
+ L+VD+ W
Sbjct: 653 VGLAVDTPW 661
Query: 3 LSVDSSW 9
L+VD +W
Sbjct: 1672 LTVDQAW 1678
2|Sequence|6|15|DSSWHRWQWR
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 4 WHRWQWR 10
+H WQW+
Sbjct: 1257 FHPWQWQ 1263
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 1 DSSWH 5
DSSWH
Sbjct: 538 DSSWH 542
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 WHRWQWR 10
+++WQW+
Sbjct: 1723 FNKWQWQ 1729
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 WHRWQWR 10
+++WQW+
Sbjct: 1743 FNKWQWQ 1749
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 WHRWQWR 10
+++WQW+
Sbjct: 1773 FNKWQWQ 1779
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 WHRWQWR 10
+++WQW+
Sbjct: 1723 FNKWQWQ 1729
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 WHRWQWR 10
+++WQW+
Sbjct: 1743 FNKWQWQ 1749
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 WHRWQWR 10
+++WQW+
Sbjct: 1773 FNKWQWQ 1779
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 DSSWHRWQ 8
DSSW R++
Sbjct: 289 DSSWPRYR 296
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 DSSWHRWQ 8
DSSW R++
Sbjct: 289 DSSWPRYR 296
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 3 SWHRWQ 8
SW+ WQ
Sbjct: 1822 SWNNWQ 1827
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 SSWHRWQ 8
S WH WQ
Sbjct: 3232 SGWHDWQ 3238
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 SSWHRWQ 8
+ WH WQ
Sbjct: 3227 TGWHNWQ 3233
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 DSSWHRWQ 8
+SSW W+
Sbjct: 1201 NSSWLSWE 1208
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 SSWHRWQWR 10
SSW + W+
Sbjct: 744 SSWDDYTWQ 752
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 4 WHRWQWR 10
WH W +R
Sbjct: 612 WHSWDFR 618
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 5 HRWQWR 10
+RW W+
Sbjct: 152 NRWYWK 157
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 5 HRWQWR 10
+RW W+
Sbjct: 152 NRWYWK 157
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 5 HRWQWR 10
+RW W+
Sbjct: 152 NRWYWK 157
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 5 HRWQWR 10
+RW W+
Sbjct: 152 NRWYWK 157
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 5 HRWQWR 10
+RW W+
Sbjct: 143 NRWYWK 148
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 5 HRWQWR 10
+RW W+
Sbjct: 158 NRWYWK 163
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 5 HRWQWR 10
+RW W+
Sbjct: 143 NRWYWK 148
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 5 HRWQWR 10
+RW W+
Sbjct: 154 NRWYWK 159
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 5 HRWQWR 10
+RW W+
Sbjct: 144 NRWYWK 149
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 5 HRWQWR 10
+RW W+
Sbjct: 144 NRWYWK 149
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 5 HRWQWR 10
+RW W+
Sbjct: 151 NRWYWK 156
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 5 HRWQWR 10
+RW W+
Sbjct: 152 NRWYWK 157
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 5 HRWQWR 10
+RW W+
Sbjct: 144 NRWYWK 149
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 WHRWQ 8
WH WQ
Sbjct: 1464 WHTWQ 1468
Query: 4 WHRWQ 8
WH WQ
Sbjct: 3190 WHDWQ 3194
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 WHRWQ 8
WH WQ
Sbjct: 1464 WHTWQ 1468
Query: 4 WHRWQ 8
WH WQ
Sbjct: 3190 WHDWQ 3194
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 WHRWQ 8
WH WQ
Sbjct: 1464 WHTWQ 1468
Query: 4 WHRWQ 8
WH WQ
Sbjct: 3190 WHDWQ 3194
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 WHRWQ 8
WH WQ
Sbjct: 1464 WHTWQ 1468
Query: 4 WHRWQ 8
WH WQ
Sbjct: 3190 WHDWQ 3194
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 WHRWQ 8
WH WQ
Sbjct: 1464 WHTWQ 1468
Query: 4 WHRWQ 8
WH WQ
Sbjct: 3190 WHDWQ 3194
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 WHRWQ 8
WH WQ
Sbjct: 3232 WHDWQ 3236
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 WHRWQ 8
WH WQ
Sbjct: 3232 WHDWQ 3236
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 WHRWQ 8
WH WQ
Sbjct: 3232 WHDWQ 3236
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 WHRWQ 8
WH WQ
Sbjct: 3232 WHDWQ 3236
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 6 RWQWR 10
RW W+
Sbjct: 149 RWYWK 153
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 SSWHRWQWR 10
++WH W+
Sbjct: 166 AAWHDSDWK 174
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 SSWHRWQWR 10
++WH W+
Sbjct: 166 AAWHDSDWK 174
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 WHRWQW 9
+HR QW
Sbjct: 234 YHRNQW 239
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 WHRWQW 9
+HR QW
Sbjct: 234 YHRNQW 239
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 SWHRWQ 8
+W+ WQ
Sbjct: 1846 TWNDWQ 1851
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 SWHRWQ 8
+W+ WQ
Sbjct: 1846 TWNDWQ 1851
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 5 HRWQW 9
H W+W
Sbjct: 460 HLWEW 464
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 5 HRWQW 9
H W+W
Sbjct: 460 HLWEW 464
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 5 HRWQW 9
H W+W
Sbjct: 460 HLWEW 464
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 5 HRWQW 9
H W+W
Sbjct: 460 HLWEW 464
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 5 HRWQW 9
H W+W
Sbjct: 460 HLWEW 464
>sp|UL06_HCMVM|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SSWHRWQ 8
S+W RW+
Sbjct: 262 SAWRRWR 268
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 5 HRWQWR 10
H W W+
Sbjct: 143 HGWWWK 148
>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 DSSWH 5
D+SWH
Sbjct: 95 DNSWH 99
>sp|NS4A_CVH22|NON-STRUCTURAL protein 4a|Human coronavirus 229E (HCoV-229E)
Query: 2 SSWHRWQWR 10
++WH W ++
Sbjct: 109 TAWHCWLYK 117
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 DSSWHRWQW 9
D W ++ W
Sbjct: 489 DKVWDKYGW 497
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 1 DSSWHRWQW 9
D W ++ W
Sbjct: 489 DKVWDKYGW 497
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 2 SSWHRWQWR 10
+ W W +R
Sbjct: 742 AEWFHWVYR 750
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 WHRWQW 9
WH+ W
Sbjct: 1767 WHKHMW 1772
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 DSSWHRWQW 9
++ WH+ W
Sbjct: 1764 EAFWHKHMW 1772
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 WHRWQWR 10
W+ WQ R
Sbjct: 1465 WYMWQVR 1471
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 5 HRWQW 9
H W+W
Sbjct: 12 HLWKW 16
3|Sequence|11|20|RWQWRVRDGF
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 RWQWRVRDGF 10
R+ W++ DGF
Sbjct: 259 RYMWKLIDGF 268
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 RWQWRVRDGF 10
R+ W++ DGF
Sbjct: 259 RYMWKLIDGF 268
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 RWQWRVRDGF 10
R+ W++ DGF
Sbjct: 259 RYMWKLIDGF 268
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 3 QWRVRDG 9
QW V DG
Sbjct: 184 QWEVHDG 190
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 RWQWRVR 7
RW W+++
Sbjct: 153 RWYWKLK 159
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 RWQWRVR 7
RW W+++
Sbjct: 153 RWYWKLK 159
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 RWQWRVR 7
RW W+++
Sbjct: 153 RWYWKLK 159
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 RWQWRVR 7
RW W+++
Sbjct: 153 RWYWKLK 159
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 RWQWRVR 7
RW W+++
Sbjct: 144 RWYWKLK 150
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 RWQWRVR 7
RW W+++
Sbjct: 159 RWYWKLK 165
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 RWQWRVR 7
RW W+++
Sbjct: 144 RWYWKLK 150
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 RWQWRVR 7
RW W+++
Sbjct: 155 RWYWKLK 161
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 RWQWRVR 7
RW W+++
Sbjct: 145 RWYWKLK 151
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 RWQWRVR 7
RW W+++
Sbjct: 145 RWYWKLK 151
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 RWQWRVR 7
RW W+++
Sbjct: 152 RWYWKLK 158
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 RWQWRVR 7
RW W+++
Sbjct: 153 RWYWKLK 159
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 1 RWQWRVR 7
RW W+++
Sbjct: 145 RWYWKLK 151
>sp|VE2_HPV31|REGULATORY protein E2|Human papillomavirus 31
Query: 2 WQWRVRDG 9
W W DG
Sbjct: 326 WHWTCTDG 333
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 2 WQWRVRD 8
W W ++D
Sbjct: 386 WMWAIKD 392
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 2 WQWRVRD 8
W W ++D
Sbjct: 386 WMWAIKD 392
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 WQWRVRD 8
W W ++D
Sbjct: 386 WMWAIKD 392
>sp|DR3_HHV6Z|UNCHARACTERIZED protein DR3|Human herpesvirus 6B (strain Z29)
Query: 4 WRVRDG 9
WRVR G
Sbjct: 54 WRVRSG 59
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RWQWRVR 7
RW W VR
Sbjct: 257 RWWWAVR 263
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 RWQWRVRDGF 10
+W W V GF
Sbjct: 1193 KWPWYVWLGF 1202
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RWQWRVR 7
RW W VR
Sbjct: 257 RWWWAVR 263
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 3 QWRVRDG 9
QW V DG
Sbjct: 184 QWEVHDG 190
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 1 RWQWRVRD 8
++ WRVR+
Sbjct: 538 KFTWRVRN 545
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 1 RWQWRVRD 8
++ WRVR+
Sbjct: 523 KFTWRVRN 530
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 RWQWRVR 7
RW W+++
Sbjct: 144 RWCWKLK 150
>sp|VE8E2_HPV31|PROTEIN E8^E2C|Human papillomavirus 31
Query: 2 WQWRVRDG 9
W W DG
Sbjct: 138 WHWTCTDG 145
>sp|AP3A_SARS|ORF3A protein|Severe acute respiratory syndrome coronavirus
Query: 1 RWQWRVRDGF 10
RWQ + GF
Sbjct: 68 RWQLALYKGF 77
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 RWQWRV 6
RW+W V
Sbjct: 719 RWEWVV 724
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 RWQWRV 6
RW+W V
Sbjct: 719 RWEWVV 724
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 RWQWRVRDGF 10
+W W + GF
Sbjct: 1211 KWPWYIWLGF 1220
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 RWQWRVRDGF 10
+W W + GF
Sbjct: 1294 KWPWYIWLGF 1303
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 1 RWQWRV 6
RW W++
Sbjct: 149 RWYWKL 154
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 RWQWRV 6
RW+W V
Sbjct: 526 RWKWYV 531
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 RWQWRVRDG 9
+W+ R++D
Sbjct: 1473 QWETRIKDA 1481
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 RWQWRVR 7
+W W ++
Sbjct: 84 KWTWEIK 90
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 RWQWRVR 7
+W W ++
Sbjct: 84 KWTWEIK 90
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 RWQWRVR 7
+W W ++
Sbjct: 84 KWTWEIK 90
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 RWQWRVRDG 9
+W+ R++D
Sbjct: 1473 QWEARIKDA 1481
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 RWQWRVRDG 9
R +WR DG
Sbjct: 936 RIEWRDPDG 944
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 RWQWRVRDG 9
R +WR DG
Sbjct: 937 RIEWRDPDG 945
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 RWQWRVRDG 9
R +WR DG
Sbjct: 936 RIEWRDPDG 944
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 RWQWRVRDG 9
R +WR DG
Sbjct: 936 RIEWRDPDG 944
>sp|US31_HCMVM|UNCHARACTERIZED protein US31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RWQWRVRDGF 10
+WQ RVRD
Sbjct: 55 QWQARVRDSH 64
>sp|US31_HCMVA|UNCHARACTERIZED protein HHRF6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RWQWRVRDGF 10
+WQ RVRD
Sbjct: 55 QWQARVRDSH 64
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 WQW 4
WQW
Sbjct: 310 WQW 312
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 2 WQW 4
WQW
Sbjct: 310 WQW 312
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 WQW 4
WQW
Sbjct: 310 WQW 312
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 QWRVRDG 9
+W RDG
Sbjct: 151 KWSARDG 157
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 RWQWRV 6
RW+W V
Sbjct: 719 RWEWVV 724
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 WQW 4
WQW
Sbjct: 310 WQW 312
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 2 WQW 4
WQW
Sbjct: 310 WQW 312
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 WQW 4
WQW
Sbjct: 308 WQW 310
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RWQWR 5
RW WR
Sbjct: 12 RWGWR 16
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RWQWR 5
RW WR
Sbjct: 12 RWGWR 16
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 WQWRVRD 8
W WR RD
Sbjct: 2459 WDWRQRD 2465
>sp|NS1_I82A8|NON-STRUCTURAL protein 1|Influenza A virus (strain
Query: 1 RWQWRVRD 8
R+ W +RD
Sbjct: 200 RFAWGIRD 207
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RWQWR 5
RW WR
Sbjct: 12 RWGWR 16
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RWQWR 5
RW WR
Sbjct: 12 RWGWR 16
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RWQWR 5
RW WR
Sbjct: 12 RWGWR 16
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 RWQWRV 6
+W+W V
Sbjct: 719 KWEWVV 724
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 RWQWRV 6
+W+W V
Sbjct: 719 KWEWVV 724
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 RWQWRV 6
+W+W V
Sbjct: 719 KWEWVV 724
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 2 WQWRVRDG 9
W W DG
Sbjct: 208 WGWTGSDG 215
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 2 WQWRVRDG 9
W W DG
Sbjct: 208 WGWTGSDG 215
4|Sequence|16|25|VRDGFPHCPS
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 DGFPHCP 9
D FP CP
Sbjct: 2401 DSFPSCP 2407
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 536 VRRAFPHC 543
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 536 VRRAFPHC 543
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 DGFPHCP 9
D FP CP
Sbjct: 2401 DSFPSCP 2407
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 539 VRRAFPHC 546
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 539 VRRAFPHC 546
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 539 VRRAFPHC 546
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 526 VRRAFPHC 533
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 526 VRRAFPHC 533
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 532 VRRAFPHC 539
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 532 VRRAFPHC 539
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 539 VRRAFPHC 546
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 539 VRRAFPHC 546
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 526 VRRAFPHC 533
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 539 VRRAFPHC 546
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 532 VRRAFPHC 539
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 536 VRRAFPHC 543
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 526 VRRAFPHC 533
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 536 VRRAFPHC 543
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 526 VRRAFPHC 533
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 526 VRRAFPHC 533
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 536 VRRAFPHC 543
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 536 VRRAFPHC 543
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 526 VRRAFPHC 533
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 VRDGFPHC 8
VR FPHC
Sbjct: 537 VRRAFPHC 544
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 6 PHCP 9
PHCP
Sbjct: 710 PHCP 713
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 6 PHCP 9
PHCP
Sbjct: 710 PHCP 713
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 6 PHCP 9
PHCP
Sbjct: 710 PHCP 713
>sp|VE6_HPV40|PROTEIN E6|Human papillomavirus 40
Query: 2 RDGFPH--CP 9
RD FPH CP
Sbjct: 55 RDDFPHAACP 64
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 FPHC 8
FPHC
Sbjct: 940 FPHC 943
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 FPHCP 9
FP CP
Sbjct: 266 FPECP 270
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 FPHCP 9
FP CP
Sbjct: 266 FPECP 270
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 FPHCP 9
FP CP
Sbjct: 266 FPECP 270
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 FPHCP 9
FP CP
Sbjct: 266 FPECP 270
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 5 FPHCP 9
FP CP
Sbjct: 266 FPECP 270
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 FPHCP 9
FP CP
Sbjct: 266 FPECP 270
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 FPHCP 9
FP CP
Sbjct: 266 FPECP 270
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 1 VRDGFPHC 8
+R GF HC
Sbjct: 124 LRHGFRHC 131
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 2 RDGFPH 7
RDG PH
Sbjct: 670 RDGRPH 675
>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)
Query: 2 RDGFPHCPS 10
RD PH PS
Sbjct: 20 RDIAPHAPS 28
>sp|VE6_HPV53|PROTEIN E6|Human papillomavirus type 53
Query: 2 RDGFPH 7
RDG+P+
Sbjct: 59 RDGYPY 64
>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /
Query: 2 RDGFPHCPS 10
RD PH PS
Sbjct: 20 RDIAPHAPS 28
>sp|C22L_VACCC|TRUNCATED CrmB protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RDGFPHCPS 10
RD PH PS
Sbjct: 20 RDIAPHAPS 28
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 GFPHCPS 10
G P+C S
Sbjct: 4292 GIPYCTS 4298
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 VRDGFPHCP 9
V D F CP
Sbjct: 738 VVDSFGRCP 746
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 VRDGFPHCP 9
+RDGF P
Sbjct: 2102 IRDGFDVTP 2110
>sp|VE6_HPV54|PROTEIN E6|Human papillomavirus type 54
Query: 2 RDGFPH 7
R GFPH
Sbjct: 57 RHGFPH 62
>sp|TRM2_HHV2H|TRIPARTITE terminase subunit 2|Human herpesvirus 2 (strain HG52)
Query: 1 VRDGFPHC 8
+RD P C
Sbjct: 13 LRDAIPDC 20
5|Sequence|21|30|PHCPSETTPL
>sp|UL125_HCMVA|UNCHARACTERIZED protein UL125|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HCPSET 7
HCPSET
Sbjct: 18 HCPSET 23
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 2 HCPSETTPL 10
HC S+ TP+
Sbjct: 306 HCGSQATPV 314
>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10
Query: 1 PHCPSETTP 9
P C S TTP
Sbjct: 214 PVCTSNTTP 222
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 2 HCPSETTPL 10
HC +TTP+
Sbjct: 284 HCGDKTTPV 292
>sp|VE8E2_HPV42|PROTEIN E8^E2C|Human papillomavirus 42
Query: 2 HCPSETTPL 10
HC S+ TP+
Sbjct: 113 HCGSQATPV 121
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PHCPSE 6
P CP E
Sbjct: 916 PECPDE 921
>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United
Query: 5 SETTPL 10
+ETTPL
Sbjct: 146 TETTPL 151
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PHCPSE 6
P CP E
Sbjct: 1214 PDCPGE 1219
>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4
Query: 3 CPSETTP 9
CPS T P
Sbjct: 26 CPSSTLP 32
>sp|MATRX_VSNJO|MATRIX protein|Vesicular stomatitis New Jersey virus
Query: 3 CPSETTP 9
CP ET P
Sbjct: 31 CPMETQP 37
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 3 CPSET 7
CP+ET
Sbjct: 1476 CPNET 1480
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 3 CPSETTP 9
CP +T P
Sbjct: 444 CPDKTPP 450
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 PHC--PSETTP 9
P+C PSE TP
Sbjct: 581 PYCLNPSEATP 591
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 3 CPSETTPL 10
C S TTP+
Sbjct: 281 CNSNTTPI 288
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 HCPSETTPL 10
HC +TT L
Sbjct: 1731 HCGQKTTTL 1739
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 HCPSETTPL 10
HC +TT L
Sbjct: 1731 HCGQKTTTL 1739
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 3 CPSETTPL 10
PS+TTP+
Sbjct: 172 VPSQTTPV 179
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PHCPSETTP 9
PH SET P
Sbjct: 868 PHLQSETGP 876
>sp|VE8E2_HPV16|PROTEIN E8^E2C|Human papillomavirus type 16
Query: 2 HCPSETTPL 10
+C S TTP+
Sbjct: 92 NCNSNTTPI 100
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PHCPSETTP 9
PH SET P
Sbjct: 851 PHLQSETGP 859
6|Sequence|26|35|ETTPLLSPEK
>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)
Query: 2 TTPLLSP 8
T PLLSP
Sbjct: 140 TNPLLSP 146
>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TTPLLSP 8
T PLLSP
Sbjct: 140 TNPLLSP 146
>sp|PG115_VACCA|CORE protein OPG115|Vaccinia virus (strain Ankara) (VACV)
Query: 2 TTPLLSP 8
T PLLSP
Sbjct: 136 TNPLLSP 142
>sp|PG115_MONPV|CORE protein OPG115|Monkeypox virus (MPXV)
Query: 2 TTPLLSP 8
T PLLSP
Sbjct: 136 TNPLLSP 142
>sp|D3_VARV|CORE protein D3|Variola virus
Query: 2 TTPLLSP 8
T PLLSP
Sbjct: 140 TNPLLSP 146
>sp|D3_VAR67|CORE protein D3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 TTPLLSP 8
T PLLSP
Sbjct: 140 TNPLLSP 146
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 4 PLLSPEK 10
PLL+PE+
Sbjct: 594 PLLAPEQ 600
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 TPLLSPE 9
TP+LSPE
Sbjct: 104 TPVLSPE 110
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 TPLLSPE 9
TP+LSPE
Sbjct: 104 TPVLSPE 110
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 TPLLSPE 9
TP+LSPE
Sbjct: 104 TPVLSPE 110
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 ETTPLLSPEK 10
E TP++ PE+
Sbjct: 1657 EDTPVVQPER 1666
>sp|M1_I71A1|MATRIX protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I78A8|MATRIX protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I78A7|MATRIX protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I76A6|MATRIX protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I75A0|MATRIX protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I73A5|MATRIX protein 1|Influenza A virus (strain A/Port
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I72A8|MATRIX protein 1|Influenza A virus (strain A/Udorn/1972
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I72A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I72A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I72A2|MATRIX protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I70A0|MATRIX protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I68A0|MATRIX protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I57A3|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I57A2|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I57A1|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I57A0|MATRIX protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I30A0|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I68A6|MATRIX protein 1|Influenza A virus (strain A/Northern
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I57A5|MATRIX protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I50A0|MATRIX protein 1|Influenza A virus (strain A/Fort
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I88A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/8/1988
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I77A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I43A0|MATRIX protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I40A0|MATRIX protein 1|Influenza A virus (strain A/Hickox/1940
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I83A8|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I80A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I78A3|MATRIX protein 1|Influenza A virus (strain A/Mallard/New
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I77AB|MATRIX protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I69A0|MATRIX protein 1|Influenza A virus (strain A/England/878/1969
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I68A4|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I56A3|MATRIX protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I51A0|MATRIX protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I33A0|MATRIX protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I03A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I02A1|MATRIX protein 1|Influenza A virus (strain A/Guinea
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 40 KTRPILSP 47
>sp|M1_I60A0|MATRIX protein 1|Influenza A virus (strain A/Ann
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I79A0|MATRIX protein 1|Influenza A virus (strain A/Bangkok/1/1979
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I35A3|MATRIX protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I89A2|MATRIX protein 1|Influenza A virus (strain A/Beijing/353/1989
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I83A1|MATRIX protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I82A9|MATRIX protein 1|Influenza A virus (strain A/Philippines/2/1982
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I77AA|MATRIX protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I54A2|MATRIX protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I45A0|MATRIX protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I000X|MATRIX protein 1|Influenza A virus (strain A/X-31
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I80AA|MATRIX protein 1|Influenza A virus (strain A/India/6263/1980
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I05A1|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I03A0|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I02A7|MATRIX protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 45 KTRPILSP 52
>sp|M1_I02A6|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I96A3|MATRIX protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I18A0|MATRIX protein 1|Influenza A virus (strain A/Brevig
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I01A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I01A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I96A2|MATRIX protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I82A7|MATRIX protein 1|Influenza A virus (strain A/Swine/Hong
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I77AC|MATRIX protein 1|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I67A0|MATRIX protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I36A0|MATRIX protein 1|Influenza A virus (strain A/Henry/1936
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I34A1|MATRIX protein 1|Influenza A virus (strain A/Puerto
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I07A0|MATRIX protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 44 KTRPILSP 51
>sp|M1_I06A0|MATRIX protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I02A4|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I02A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I00A1|MATRIX protein 1|Influenza A virus (strain A/New
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I00A0|MATRIX protein 1|Influenza A virus (strain A/Duck/Hong
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I01A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 1 ETTPLLSPE 9
ETT ++SP+
Sbjct: 338 ETTDIISPK 346
>sp|M1_I88A7|MATRIX protein 1|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I85A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I85A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I67A2|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I61A1|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I54A1|MATRIX protein 1|Influenza A virus (strain A/Swine/May/1954
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I37A0|MATRIX protein 1|Influenza A virus (strain A/Swine/29/1937
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I77A9|MATRIX protein 1|Influenza A virus (strain A/Equine/New
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I68A5|MATRIX protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I02A5|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 2 TTPLLS 7
TTPLLS
Sbjct: 293 TTPLLS 298
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 TTPLLS 7
TTPLLS
Sbjct: 293 TTPLLS 298
>sp|M1_I80A2|MATRIX protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 1 ETTPLLSPEK 10
E PLLSP
Sbjct: 335 EMQPLLSPSN 344
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 3 TPLLSPEK 10
TP+++PE+
Sbjct: 468 TPIINPEE 475
>sp|M1_I97A1|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I97A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I96A0|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I81A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I59A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I02A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
>sp|M1_I000F|MATRIX protein 1|Influenza A virus (strain A/Chicken/Weybridge
Query: 1 ETTPLLSP 8
+T P+LSP
Sbjct: 47 KTRPILSP 54
7|Sequence|31|40|LSPEKGRQSY
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 5 KGRQSY 10
KGRQSY
Sbjct: 267 KGRQSY 272
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 LSPEKGRQ 8
L PE G+Q
Sbjct: 2228 LQPETGKQ 2235
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 LSPEKGRQ 8
L PE G+Q
Sbjct: 2228 LQPETGKQ 2235
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 LSPEKGRQ 8
L PE G+Q
Sbjct: 2228 LQPEAGKQ 2235
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 LSPEKGRQ 8
L PE G+Q
Sbjct: 2228 LQPETGKQ 2235
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 LSPEKGRQ 8
L PE G+Q
Sbjct: 2228 LQPEAGKQ 2235
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 LSPEKGRQ 8
L PE G+Q
Sbjct: 2228 LQPEAGKQ 2235
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 LSPEKGRQ 8
L PE G+Q
Sbjct: 2228 LQPEAGKQ 2235
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 LSPEKGRQ 8
L PE G+Q
Sbjct: 2229 LQPEPGKQ 2236
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 LSPEKGRQ 8
L PE G+Q
Sbjct: 2230 LQPEPGKQ 2237
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 LSPEKGRQ 8
L PE G+Q
Sbjct: 2230 LQPEPGKQ 2237
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 LSPEKGRQS 9
+SP +GR++
Sbjct: 23 VSPSRGRRT 31
>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 LSPEKG 6
L+PEKG
Sbjct: 75 LTPEKG 80
>sp|VIF_HV2RO|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 LSPEKG 6
L+PEKG
Sbjct: 75 LTPEKG 80
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 LSPEKG 6
L+PEKG
Sbjct: 75 LTPEKG 80
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 LSPEKG 6
L+PEKG
Sbjct: 75 LTPEKG 80
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 LSPEKG 6
L+PEKG
Sbjct: 75 LTPEKG 80
>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 LSPEKG 6
L+PEKG
Sbjct: 75 LTPEKG 80
>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 LSPEKG 6
L+PEKG
Sbjct: 75 LTPEKG 80
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 LSPEKG 6
L+PEKG
Sbjct: 75 LTPEKG 80
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 5 KGRQSY 10
KG+QSY
Sbjct: 268 KGKQSY 273
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 3 PEKGRQSY 10
P KG Q Y
Sbjct: 621 PNKGTQQY 628
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 3 PEKGRQSY 10
P KG Q Y
Sbjct: 621 PNKGTQQY 628
8|Sequence|36|45|GRQSYNLTQQ
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 QSYNLTQ 9
QS+NLT+
Sbjct: 927 QSFNLTE 933
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 2 RQSYNLT 8
+Q YNLT
Sbjct: 115 KQPYNLT 121
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 2 RQSYNLT 8
+Q YNLT
Sbjct: 115 KQPYNLT 121
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 2 RQSYNLT 8
+Q YNLT
Sbjct: 114 KQPYNLT 120
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 2 RQSYNLT 8
+Q YNLT
Sbjct: 115 KQPYNLT 121
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 2 RQSYNLT 8
+Q YNLT
Sbjct: 115 KQPYNLT 121
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 2 RQSYNLT 8
+Q YNLT
Sbjct: 115 KQPYNLT 121
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 3 QSYNLTQ 9
Q+YN+T+
Sbjct: 122 QTYNITK 128
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 GRQSY 5
GRQSY
Sbjct: 268 GRQSY 272
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 4 SYNLTQQ 10
+YNLTQ
Sbjct: 1051 TYNLTQH 1057
>sp|NCAP_SFTSV|NUCLEOPROTEIN phlebovirus (isolate SFTSV/Human/China/HB29/2010) (Severe
Query: 1 GRQSYNLTQ 9
G Q NLT+
Sbjct: 12 GEQQLNLTE 20
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 QSYNLTQ 9
QS+N+T+
Sbjct: 929 QSFNITE 935
9|Sequence|41|50|NLTQQRVVFP
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 NLTQQRVVFP 10
N Q+R++FP
Sbjct: 1457 NPNQERMLFP 1466
>sp|E4OR1_ADE09|E4-ORF1 adenovirus D serotype 9
Query: 1 NLTQQRVVFP 10
L +RV+FP
Sbjct: 108 TLLLERVIFP 117
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 LTQQRVVFP 10
+TQ V+FP
Sbjct: 872 VTQNPVLFP 880
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LTQQRVVFP 10
+TQ V+FP
Sbjct: 872 VTQNPVLFP 880
10|Sequence|46|55|RVVFPNNSIF
>sp|PG112_VAR67|LATE protein OPG112|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 PNNSIF 10
PNN+IF
Sbjct: 36 PNNTIF 41
>sp|PG112_VACCC|LATE protein OPG112|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 PNNSIF 10
PNN+IF
Sbjct: 36 PNNTIF 41
>sp|PG112_VACCA|LATE protein OPG112|Vaccinia virus (strain Ankara) (VACV)
Query: 5 PNNSIF 10
PNN+IF
Sbjct: 36 PNNTIF 41
>sp|PG112_MONPV|LATE protein OPG112|Monkeypox virus (MPXV)
Query: 5 PNNSIF 10
PNN+IF
Sbjct: 36 PNNTIF 41
>sp|H7_VARV|LATE protein H7|Variola virus
Query: 5 PNNSIF 10
PNN+IF
Sbjct: 36 PNNTIF 41
>sp|H7_VACCT|LATE protein H7|Vaccinia virus (strain Tian Tan)
Query: 5 PNNSIF 10
PNN+IF
Sbjct: 36 PNNTIF 41
>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain
Query: 2 VVFPNNSI 9
+VFPN SI
Sbjct: 424 IVFPNTSI 431
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 4 FPNNSIF 10
FPN++IF
Sbjct: 31 FPNSAIF 37
>sp|A18_YLDV|TRANSCRIPT termination protein A18|Yaba-like disease virus (YLDV)
Query: 2 VVFPNNSI 9
+VFPN SI
Sbjct: 425 IVFPNTSI 432
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 RVVFPNNSI 9
++ FP N+I
Sbjct: 698 KIFFPRNTI 706
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 4 FPNNSI 9
FPNN I
Sbjct: 508 FPNNGI 513
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 RVVFPNN 7
+V+FPN+
Sbjct: 1565 KVLFPND 1571
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 RVVFPNN 7
+V+FPN+
Sbjct: 1565 KVLFPND 1571
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 4 FPNNSI 9
FPNN I
Sbjct: 508 FPNNGI 513
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 VFPNNSI 9
VFP NSI
Sbjct: 274 VFPLNSI 280
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 1 RVVFPNNSI 9
RVV PNN I
Sbjct: 779 RVVDPNNLI 787
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 2 VVFPN 6
VVFPN
Sbjct: 165 VVFPN 169
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 VFPNNSI 9
VFP NSI
Sbjct: 274 VFPLNSI 280
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 VVFPN 6
VVFPN
Sbjct: 160 VVFPN 164
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 2 VVFPN 6
VVFPN
Sbjct: 159 VVFPN 163
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 2 VVFPN 6
VVFPN
Sbjct: 158 VVFPN 162
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 4 FPNNSIF 10
FPNN +
Sbjct: 680 FPNNKLL 686
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 VVFPN 6
VVFPN
Sbjct: 166 VVFPN 170
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 VVFPNN 7
+VFP+N
Sbjct: 20 IVFPHN 25
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 VVFPNN 7
+VFP+N
Sbjct: 20 IVFPHN 25
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 VVFPNN 7
+VFP+N
Sbjct: 20 IVFPHN 25
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 2 VVFPNN 7
+VFP+N
Sbjct: 20 IVFPHN 25
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 VVFPNN 7
+VFP+N
Sbjct: 20 IVFPHN 25
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 VVFPNN 7
+VFP+N
Sbjct: 20 IVFPHN 25
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 VVFPNNSIF 10
V+F NN+ F
Sbjct: 6550 VIFKNNTSF 6558
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 FPNNSI 9
+PNN+I
Sbjct: 6296 YPNNAI 6301
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 VVFPNNSIF 10
V+F NN+ F
Sbjct: 6500 VIFKNNTSF 6508
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 3 VFPNNS 8
+FPNN+
Sbjct: 177 IFPNNA 182
11|Sequence|51|60|NNSIFHQDWE
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 NNSIFHQD 8
NNSI H+D
Sbjct: 199 NNSIIHRD 206
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 NSIFHQDW 9
N+IF +DW
Sbjct: 1433 NNIFKKDW 1440
>sp|YVAE_VACCC|UNCHARACTERIZED 18.2 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NNSIFHQD 8
NN+I H D
Sbjct: 9 NNAILHDD 16
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 4 IFHQDW 9
+ HQDW
Sbjct: 470 LMHQDW 475
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 4 IFHQDW 9
+ HQDW
Sbjct: 470 LMHQDW 475
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 4 IFHQDWE 10
IF+Q+W+
Sbjct: 71 IFNQEWQ 77
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 4 IFHQDW 9
+ HQDW
Sbjct: 470 LMHQDW 475
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 4 IFHQDW 9
+ HQDW
Sbjct: 470 LMHQDW 475
>sp|UNG_VACCC|URACIL-DNA glycosylase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 FHQDWE 10
+H DWE
Sbjct: 15 YHDDWE 20
>sp|UNG_VACCA|URACIL-DNA glycosylase|Vaccinia virus (strain Ankara) (VACV)
Query: 5 FHQDWE 10
+H DWE
Sbjct: 15 YHDDWE 20
>sp|UNG_VARV|URACIL-DNA glycosylase|Variola virus
Query: 5 FHQDWE 10
+H DWE
Sbjct: 15 YHDDWE 20
>sp|UNG_VAR67|URACIL-DNA glycosylase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 FHQDWE 10
+H DWE
Sbjct: 15 YHDDWE 20
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 NSIFHQDWE 10
NSI ++WE
Sbjct: 810 NSILSKNWE 818
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 2 NSIFH 6
NSIFH
Sbjct: 169 NSIFH 173
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 2 NSIFH 6
NSIFH
Sbjct: 168 NSIFH 172
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 2 NSIFH 6
NSIFH
Sbjct: 169 NSIFH 173
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 2 NSIFH 6
NSIFH
Sbjct: 169 NSIFH 173
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 2 NSIFH 6
NSIFH
Sbjct: 169 NSIFH 173
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 2 NSIFH 6
NSIFH
Sbjct: 168 NSIFH 172
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 2 NSIFH 6
NSIFH
Sbjct: 168 NSIFH 172
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 2 NSIFH 6
NSIFH
Sbjct: 169 NSIFH 173
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 2 NSIFH 6
NSIFH
Sbjct: 168 NSIFH 172
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 2 NSIFH 6
NSIFH
Sbjct: 169 NSIFH 173
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 2 NSIFH 6
NSIFH
Sbjct: 169 NSIFH 173
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 2 NSIFH 6
NSIFH
Sbjct: 168 NSIFH 172
>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)
Query: 1 NNSIFHQD 8
NN IF+QD
Sbjct: 158 NNMIFNQD 165
>sp|UNG_MONPV|URACIL-DNA glycosylase|Monkeypox virus (MPXV)
Query: 5 FHQDWE 10
+H DWE
Sbjct: 15 YHDDWE 20
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 NNSIFHQD 8
NN+ HQD
Sbjct: 461 NNNTHHQD 468
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 NNSIFHQDWE 10
NN F Q W+
Sbjct: 2298 NNPPFIQAWQ 2307
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 NNSIFHQD 8
NN+ HQD
Sbjct: 461 NNNTHHQD 468
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 2 NSIFHQ 7
N+IFH+
Sbjct: 142 NTIFHE 147
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 2 NSIFHQ 7
N+IFH+
Sbjct: 143 NTIFHE 148
>sp|NSP6_ROTHK|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 1 NNSIFHQ 7
NS+FHQ
Sbjct: 18 TNSMFHQ 24
>sp|NSP6_ROTAD|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 2 NSIFHQ 7
NS+FHQ
Sbjct: 19 NSMFHQ 24
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 NNSIFHQD 8
NN+ HQD
Sbjct: 461 NNNTHHQD 468
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 1 NNSIFHQD 8
NN+ HQD
Sbjct: 461 NNNTHHQD 468
>sp|NSP6_ROTHW|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 1 NNSIFHQ 7
NS+FHQ
Sbjct: 18 TNSMFHQ 24
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 NSIFHQ 7
N+IFH+
Sbjct: 136 NTIFHE 141
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 NSIFHQ 7
N+IFH+
Sbjct: 136 NTIFHE 141
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 NNSIFHQ 7
N+S FHQ
Sbjct: 182 NSSKFHQ 188
>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 NSIFHQDW 9
N+I+ +DW
Sbjct: 276 NTIWGRDW 283
12|Sequence|56|65|HQDWEEVSRR
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 HQDWEEVSR 9
HQDW E ++
Sbjct: 472 HQDWVEPAK 480
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 HQDWEEVSR 9
HQDW E ++
Sbjct: 472 HQDWVEPAK 480
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 HQDWEEVSR 9
HQDW E ++
Sbjct: 472 HQDWVEPAK 480
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 HQDWEEVSR 9
H+DW+ + +
Sbjct: 3761 HEDWQRIGK 3769
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 HQDWEEVSR 9
HQDW E ++
Sbjct: 472 HQDWVEPAK 480
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 HQDWEEVSR 9
H+DWE+ R
Sbjct: 716 HKDWEQPDR 724
>sp|UNG_VARV|URACIL-DNA glycosylase|Variola virus
Query: 1 HQDWEEV 7
H DWE V
Sbjct: 16 HDDWEPV 22
>sp|UNG_VACCC|URACIL-DNA glycosylase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HQDWEEV 7
H DWE V
Sbjct: 16 HDDWEPV 22
>sp|UNG_VACCA|URACIL-DNA glycosylase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HQDWEEV 7
H DWE V
Sbjct: 16 HDDWEPV 22
>sp|UNG_MONPV|URACIL-DNA glycosylase|Monkeypox virus (MPXV)
Query: 1 HQDWEEV 7
H DWE V
Sbjct: 16 HDDWEPV 22
>sp|UNG_VAR67|URACIL-DNA glycosylase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 HQDWEEV 7
H DWE V
Sbjct: 16 HDDWEPV 22
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 HQDWEEVSR 9
H+DWE+ R
Sbjct: 716 HKDWEQPDR 724
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 HQDWEEVSR 9
HQ W+E+SR
Sbjct: 1763 HQ-WDEISR 1770
>sp|X_HBVF6|PROTEIN X|Hepatitis B virus genotype F2
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVF4|PROTEIN X|Hepatitis B virus genotype F2
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVF2|PROTEIN X|Hepatitis B virus genotype F1
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVE4|PROTEIN X|Hepatitis B virus genotype E
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVE3|PROTEIN X|Hepatitis B virus genotype E
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVE2|PROTEIN X|Hepatitis B virus genotype E
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVE1|PROTEIN X|Hepatitis B virus genotype E
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVD7|PROTEIN X|Hepatitis B virus genotype D
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVD6|PROTEIN X|Hepatitis B virus genotype D
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVD5|PROTEIN X|Hepatitis B virus genotype D
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVD4|PROTEIN X|Hepatitis B virus genotype D
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVD3|PROTEIN X|Hepatitis B virus genotype D
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVCJ|PROTEIN X|Hepatitis B virus genotype C
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVC9|PROTEIN X|Hepatitis B virus genotype C
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVC7|PROTEIN X|Hepatitis B virus genotype C
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVC5|PROTEIN X|Hepatitis B virus genotype C
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVC3|PROTEIN X|Hepatitis B virus genotype C
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVC2|PROTEIN X|Hepatitis B virus genotype C
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVC1|PROTEIN X|Hepatitis B virus genotype C
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVC0|PROTEIN X|Hepatitis B virus genotype C
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVA9|PROTEIN X|Hepatitis B virus genotype A3
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVA8|PROTEIN X|Hepatitis B virus genotype A3
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVA7|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVA6|PROTEIN X|Hepatitis B virus genotype A1
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVA4|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVA3|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVA2|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|X_HBVF1|PROTEIN X|Hepatitis B virus genotype F2
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QDWEEVSRR 10
+ WEE+ R+
Sbjct: 215 RSWEELERK 223
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 2 QDWEEVSRR 10
+ WEE+ R+
Sbjct: 215 RSWEELERK 223
>sp|X_HBVC8|PROTEIN X|Hepatitis B virus genotype C
Query: 2 QDWEEV 7
+DWEE+
Sbjct: 118 KDWEEL 123
>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 WEEVS 8
WEE+S
Sbjct: 227 WEEIS 231
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DWEEVSRR 10
DW EVS R
Sbjct: 70 DWPEVSIR 77
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DWEEVSRR 10
DW EVS R
Sbjct: 70 DWPEVSIR 77
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 HQDWEEVSRR 10
H DW+ R
Sbjct: 16 HNDWKNKQYR 25
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 HQDWEEVSR 9
H++W E+ +
Sbjct: 1548 HENWSELHK 1556
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 HQDWEE 6
H DW++
Sbjct: 884 HTDWQK 889
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 HQDWE 5
H DW+
Sbjct: 887 HNDWQ 891
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 DWEEV 7
DW+EV
Sbjct: 3230 DWQEV 3234
>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HQDWEEVSRR 10
HQD + +RR
Sbjct: 8 HQDLVQATRR 17
13|Sequence|61|70|EVSRRYPGNR
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 EVSRRYP 7
E+SRRYP
Sbjct: 1098 ELSRRYP 1104
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 EVSRRYP 7
E++RRYP
Sbjct: 1098 ELARRYP 1104
Query: 2 VSRRYPGN 9
V+ RY GN
Sbjct: 1145 VTHRYTGN 1152
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 EVSRRYP 7
E++RRYP
Sbjct: 1098 ELARRYP 1104
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 EVSRRYP 7
E++RRYP
Sbjct: 1098 ELARRYP 1104
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 EVSRRYP 7
++SRRYP
Sbjct: 1100 QLSRRYP 1106
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 EVSRRYP 7
++SRRYP
Sbjct: 1100 QLSRRYP 1106
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 EVSRRYP 7
++SRRYP
Sbjct: 1100 QLSRRYP 1106
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 EVSRRYP 7
++SRRYP
Sbjct: 1100 QLSRRYP 1106
>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)
Query: 3 SRRYP 7
SRRYP
Sbjct: 434 SRRYP 438
>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)
Query: 3 SRRYP 7
SRRYP
Sbjct: 437 SRRYP 441
>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 SRRYP 7
SRRYP
Sbjct: 434 SRRYP 438
>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)
Query: 3 SRRYP 7
SRRYP
Sbjct: 434 SRRYP 438
>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)
Query: 3 SRRYP 7
SRRYP
Sbjct: 434 SRRYP 438
>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)
Query: 3 SRRYP 7
SRRYP
Sbjct: 434 SRRYP 438
>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)
Query: 3 SRRYP 7
SRRYP
Sbjct: 434 SRRYP 438
>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)
Query: 3 SRRYP 7
SRRYP
Sbjct: 434 SRRYP 438
>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)
Query: 3 SRRYP 7
SRRYP
Sbjct: 434 SRRYP 438
>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 SRRYP 7
SRRYP
Sbjct: 434 SRRYP 438
>sp|US10_HHV2H|VIRION protein US10|Human herpesvirus 2 (strain HG52)
Query: 3 SRRYPGNR 10
SR YPG R
Sbjct: 64 SRAYPGTR 71
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 6 YPGNR 10
YPGNR
Sbjct: 261 YPGNR 265
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 6 YPGNR 10
YPGNR
Sbjct: 261 YPGNR 265
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 6 YPGNR 10
YPGNR
Sbjct: 260 YPGNR 264
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 EVSRRYPGN 9
++ ++PGN
Sbjct: 676 KIKEKFPGN 684
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 3 SRRYPGNR 10
S+RYP +
Sbjct: 493 SKRYPNQK 500
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 3 SRRYPGNR 10
S+RYP +
Sbjct: 478 SKRYPNEK 485
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 RYPGNR 10
RY GNR
Sbjct: 351 RYKGNR 356
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 EVSRRYPGN 9
++ ++PGN
Sbjct: 676 KIKTKFPGN 684
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 EVSRRYPGN 9
++ ++PGN
Sbjct: 676 KIKAKFPGN 684
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 1 EVSRRYPGNR 10
E YPG R
Sbjct: 235 ETEAPYPGKR 244
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EVSRRYP 7
EVS+ YP
Sbjct: 123 EVSQNYP 129
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 EVSRRYP 7
++SR YP
Sbjct: 907 DISRTYP 913
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 EVSRRYP 7
++SR YP
Sbjct: 907 DISRTYP 913
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 EVSRRYP 7
++SR YP
Sbjct: 905 DISRTYP 911
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 EVSRRYP 7
++SR YP
Sbjct: 907 DISRTYP 913
14|Sequence|66|75|YPGNRTCTTK
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PGNRTC 7
PG RTC
Sbjct: 231 PGPRTC 236
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PGNRTC 7
PGN TC
Sbjct: 447 PGNLTC 452
>sp|NCAP_BUNSH|NUCLEOPROTEIN snowshoe hare
Query: 1 YPGNR 5
+PGNR
Sbjct: 77 FPGNR 81
>sp|NCAP_BUNLC|NUCLEOPROTEIN La Crosse
Query: 1 YPGNR 5
+PGNR
Sbjct: 77 FPGNR 81
>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United
Query: 1 YPGNR 5
+PGNR
Sbjct: 77 FPGNR 81
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 YPGNRTCT 8
YPG+ CT
Sbjct: 1104 YPGHTFCT 1111
>sp|PRO_ADE40|PROTEASE adenovirus F serotype 40
Query: 2 PGNRTC 7
P NRTC
Sbjct: 62 PKNRTC 67
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 YPGNRTCTTK 10
YP + C T+
Sbjct: 320 YPNEKDCETR 329
>sp|NCAP_BUNYW|NUCLEOPROTEIN virus (BUNV)
Query: 1 YPGNR 5
+PGNR
Sbjct: 77 FPGNR 81
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 2 PGNRTC 7
PGN+ C
Sbjct: 461 PGNKAC 466
>sp|UL33_HHV6U|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 6A (strain
Query: 1 YPGNRTCTT 9
+ GN +CT+
Sbjct: 12 FKGNASCTS 20
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 1 YPGNRTCTT 9
+ G R C+T
Sbjct: 19 WKGERNCST 27
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GNRTCTT 9
GN TCT+
Sbjct: 429 GNITCTS 435
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 2 PGNRTCT 8
P N TCT
Sbjct: 270 PANITCT 276
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 2 PGNRTCT 8
P N TCT
Sbjct: 270 PANITCT 276
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen
Query: 2 PGNRTCT 8
P N TCT
Sbjct: 267 PANITCT 273
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 2 PGNRTCT 8
P N TCT
Sbjct: 269 PANITCT 275
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 2 PGNRTCTTK 10
PGN + +TK
Sbjct: 712 PGNSSTSTK 720
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PGNRTCTTK 10
PGN + +TK
Sbjct: 682 PGNSSTSTK 690
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PGNRTCTTK 10
PGN + +TK
Sbjct: 712 PGNSSTSTK 720
15|Sequence|71|80|TCTTKYTLFT
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 CTTKYTLF 9
CT YT+F
Sbjct: 625 CTVNYTIF 632
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CTTKYTLF 9
CT YT+F
Sbjct: 620 CTVNYTIF 627
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CTTKYTLF 9
CT YT+F
Sbjct: 620 CTVNYTIF 627
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 CTTKYTLF 9
CT YT+F
Sbjct: 621 CTVNYTIF 628
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 CTTKYTLF 9
CT YT+F
Sbjct: 624 CTVNYTIF 631
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 3 TTKYTLFT 10
T KY LFT
Sbjct: 97 TGKYVLFT 104
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CTTKYTLF 9
CT YT+F
Sbjct: 620 CTINYTIF 627
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 CTTKYTLF 9
CT YT+F
Sbjct: 620 CTINYTIF 627
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 CTTKYTLF 9
CT YT+F
Sbjct: 620 CTINYTIF 627
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 CTTKYTLF 9
CT YT+F
Sbjct: 621 CTLNYTIF 628
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 CTTKYTLF 9
CT +TLF
Sbjct: 626 CTVNFTLF 633
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 3 TTKYTLFT 10
T KY LFT
Sbjct: 97 TGKYVLFT 104
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 CTTKYTLF 9
CT YT++
Sbjct: 624 CTVNYTIY 631
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 CTTKYTLF 9
CT +T+F
Sbjct: 624 CTVNFTIF 631
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 CTTKYTLF 9
CT +T+F
Sbjct: 624 CTVNFTIF 631
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 CTTKYTLF 9
CT +T+F
Sbjct: 624 CTVNFTIF 631
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CTTKYTLF 9
CT +T+F
Sbjct: 620 CTANFTIF 627
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CTTKYTLF 9
CT +T+F
Sbjct: 620 CTVNFTIF 627
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CTTKYTLF 9
CT +T+F
Sbjct: 620 CTVNFTIF 627
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CTTKYTLF 9
CT +T+F
Sbjct: 620 CTVNFTIF 627
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 CTTKYTL 8
CT YTL
Sbjct: 624 CTVNYTL 630
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 2 CTTKYTLF 9
CT +T+F
Sbjct: 624 CTVNFTIF 631
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CTTKYTLF 9
CT +T+F
Sbjct: 620 CTVNFTIF 627
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 3 TTKYTLFT 10
+TKYTL T
Sbjct: 35 STKYTLET 42
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 3 TTKYTLFT 10
+TKYTL T
Sbjct: 35 STKYTLET 42
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 3 TTKYTLFT 10
+TKYTL T
Sbjct: 35 STKYTLET 42
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CTTKYTLF 9
CT +T+F
Sbjct: 620 CTVNFTVF 627
16|Sequence|76|85|YTLFTFLPRN
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 LFTFLPRN 10
LFTF PR+
Sbjct: 290 LFTFSPRH 297
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 174 LFTFSPR 180
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 174 LFTFSPR 180
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 290 LFTFSPR 296
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 162 LFTFSPR 168
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 290 LFTFSPR 296
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 290 LFTFSPR 296
>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 174 LFTFSPR 180
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 290 LFTFSPR 296
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 290 LFTFQPR 296
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 290 LFTFRPR 296
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 290 LFTFSPR 296
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 290 LFTFSPR 296
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 290 LFTFSPR 296
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 290 LFTFSPR 296
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 290 LFTFSPR 296
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 290 LFTFRPR 296
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 290 LFTFSPR 296
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 290 LFTFSPR 296
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 3 LFTFLPR 9
LFTF PR
Sbjct: 290 LFTFSPR 296
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 LFTFLPRN 10
+FTF PR+
Sbjct: 290 IFTFSPRH 297
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 LFTFLPRN 10
LFTF P++
Sbjct: 290 LFTFRPKH 297
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 LFTFLPRN 10
LFT LP N
Sbjct: 217 LFTHLPGN 224
>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 LFTFLPRN 10
LFT LP N
Sbjct: 217 LFTHLPGN 224
>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 LFTFLPRN 10
LFT LP N
Sbjct: 217 LFTHLPGN 224
>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 LFTFLPRN 10
LFT LP N
Sbjct: 217 LFTHLPGN 224
>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 LFTFLPRN 10
LFT LP N
Sbjct: 217 LFTHLPGN 224
>sp|UL116_HCMVM|UNCHARACTERIZED protein UL116|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 TFLPRN 10
TF+PRN
Sbjct: 246 TFVPRN 251
>sp|UL116_HCMVA|UNCHARACTERIZED protein UL116|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 TFLPRN 10
TF+PRN
Sbjct: 247 TFVPRN 252
>sp|ALT2B_ENMGO|PROTEIN 2B*|Mengo encephalomyocarditis virus
Query: 4 FTFLPR 9
FTF PR
Sbjct: 2 FTFKPR 7
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 FTFLPR 9
FTF PR
Sbjct: 291 FTFRPR 296
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 4 FTFLPR 9
FTF PR
Sbjct: 292 FTFRPR 297
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 FTFLPR 9
FTF PR
Sbjct: 291 FTFRPR 296
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LFTFLPRN 10
LF F+P N
Sbjct: 377 LFCFVPGN 384
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LFTFLPRN 10
LF F+P N
Sbjct: 377 LFCFVPGN 384
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LFTFLPRN 10
LF F+P N
Sbjct: 377 LFCFVPGN 384
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LFTFLPRN 10
LF F+P N
Sbjct: 377 LFCFVPGN 384
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LFTFLPRN 10
LF F+P N
Sbjct: 377 LFCFVPGN 384
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LFTFLPRN 10
LF F+P N
Sbjct: 377 LFCFVPGN 384
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LFTFLPRN 10
LF F+P N
Sbjct: 377 LFCFVPGN 384
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LFTFLPRN 10
LF F+P N
Sbjct: 377 LFCFVPGN 384
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LFTFLPRN 10
LF F+P N
Sbjct: 377 LFCFVPGN 384
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LFTFLPRN 10
LF F+P N
Sbjct: 377 LFCFVPGN 384
17|Sequence|81|90|FLPRNLFEQF
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 3 PRNLFEQF 10
P+NLF+ F
Sbjct: 724 PQNLFKNF 731
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 3 PRNLFEQF 10
P+NLF+ F
Sbjct: 724 PQNLFKNF 731
>sp|UL116_HCMVM|UNCHARACTERIZED protein UL116|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FLPRNL 6
F+PRNL
Sbjct: 247 FVPRNL 252
>sp|UL116_HCMVA|UNCHARACTERIZED protein UL116|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FLPRNL 6
F+PRNL
Sbjct: 248 FVPRNL 253
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 2 LPRNLFEQF 10
+P N+F+Q+
Sbjct: 75 IPANMFDQY 83
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 RNLFEQF 10
RN+FE F
Sbjct: 2547 RNVFENF 2553
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 RNLFEQF 10
RN+FE F
Sbjct: 2547 RNVFENF 2553
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 2 LPRNLFEQF 10
+P N+F+Q+
Sbjct: 75 IPANMFDQY 83
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 1 FLPRNLFEQF 10
FL +NLFE++
Sbjct: 349 FLYKNLFEKW 358
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 1 FLPRNLFEQF 10
FL +NLFE++
Sbjct: 633 FLYKNLFEKW 642
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FLPRNLFEQF 10
FL +NLFE++
Sbjct: 633 FLYKNLFEKW 642
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|BALF1_EBVG|APOPTOSIS regulator BALF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LPRNLFEQF 10
+PR+L QF
Sbjct: 196 MPRSLRRQF 204
>sp|BALF1_EBVB9|APOPTOSIS regulator BALF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LPRNLFEQF 10
+PR+L QF
Sbjct: 196 MPRSLRRQF 204
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFEKF 699
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 694 NLFERF 699
>sp|RDRP_I82A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 NLFEQF 10
NLFE+F
Sbjct: 98 NLFEKF 103
18|Sequence|86|95|LFEQFHRWAN
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 LFEQFHRWAN 10
+FE+ H+WA+
Sbjct: 2934 MFEEQHKWAS 2943
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 FEQFHRW 8
FEQF +W
Sbjct: 2815 FEQFDQW 2821
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 FEQFHRW 8
FEQF +W
Sbjct: 2815 FEQFDQW 2821
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 LFEQFHRW 8
+FE+ H+W
Sbjct: 2936 IFEEEHQW 2943
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 4 QFHRWAN 10
Q H+W N
Sbjct: 681 QLHQWRN 687
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 LFEQFHRWAN 10
+FE+ ++W N
Sbjct: 2939 MFEEQNQWKN 2948
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 LFEQFHRWAN 10
+FE+ ++W N
Sbjct: 2943 MFEEQNQWKN 2952
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 LFEQFHRW 8
+ E F RW
Sbjct: 2663 VLENFERW 2670
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 4 QFHRW 8
FHRW
Sbjct: 248 HFHRW 252
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 LFEQFHRWAN 10
+FE+ ++WA+
Sbjct: 2934 IFEEQNQWAS 2943
>sp|NS8B_SARS|ORF8B protein|Severe acute respiratory syndrome coronavirus
Query: 5 FHRW 8
FHRW
Sbjct: 30 FHRW 33
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 5 FHRW 8
FHRW
Sbjct: 602 FHRW 605
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 QFHRW 8
+FH+W
Sbjct: 1718 KFHKW 1722
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 QFHRW 8
+FH+W
Sbjct: 1718 KFHKW 1722
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 5 FHRWA 9
FH WA
Sbjct: 477 FHGWA 481
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 5 FHRWA 9
FH WA
Sbjct: 477 FHGWA 481
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 5 FHRWA 9
FH WA
Sbjct: 479 FHGWA 483
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 5 FHRWA 9
FH WA
Sbjct: 479 FHGWA 483
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 5 FHRWA 9
FH WA
Sbjct: 479 FHGWA 483
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 5 FHRWA 9
FH WA
Sbjct: 477 FHGWA 481
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 5 FHRWA 9
FH WA
Sbjct: 479 FHGWA 483
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 5 FHRWA 9
FH WA
Sbjct: 477 FHGWA 481
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 3 EQFHRWAN 10
E F+ W N
Sbjct: 90 ENFNMWKN 97
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 EQFHRWAN 10
E+F+ W N
Sbjct: 82 EKFNMWEN 89
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 LFEQFHRWAN 10
+FE+ ++W++
Sbjct: 2938 MFEEQNQWSS 2947
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 EQFHRWAN 10
E+F+ W N
Sbjct: 90 EKFNMWKN 97
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 3 EQFHRWAN 10
E F+ W N
Sbjct: 90 ENFNMWKN 97
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 LFEQFHRWAN 10
+FE+ ++W++
Sbjct: 2943 MFEEQNQWSS 2952
19|Sequence|91|100|HRWANLYFLF
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 HRWANLYFLF 10
HR++NLY ++
Sbjct: 387 HRFSNLYAMY 396
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 HRWANLYFLF 10
HR+ N+Y ++
Sbjct: 387 HRFLNIYAMY 396
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 HRWANLY 7
+RW NL+
Sbjct: 2288 YRWLNLF 2294
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RWANLYFLF 10
+WANL+ F
Sbjct: 668 KWANLWNWF 676
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RWANLYFLF 10
+WANL+ F
Sbjct: 665 KWANLWNWF 673
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 HRWANLYFLF 10
HR+ N+Y ++
Sbjct: 387 HRFLNVYAMY 396
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RWANLYFLF 10
+WANL+ F
Sbjct: 674 KWANLWNWF 682
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 WANLYFL 9
W N YFL
Sbjct: 848 WWNQYFL 854
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 WANLYFL 9
W N YFL
Sbjct: 849 WWNQYFL 855
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 2 RWANLYF 8
RW ++Y+
Sbjct: 133 RWTSVYY 139
>sp|YVAQ_VACCC|UNCHARACTERIZED 8.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 NLYFLF 10
+LYFLF
Sbjct: 7 HLYFLF 12
>sp|YVDI_VACCC|UNCHARACTERIZED 9.5 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RWANLYFL 9
RW NLY L
Sbjct: 24 RWFNLYIL 31
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 WANLYFL 9
W N YF+
Sbjct: 842 WWNQYFI 848
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 4 ANLYFLF 10
+ LYFLF
Sbjct: 420 SELYFLF 426
>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus
Query: 2 RWANLYFLF 10
RW NL+ +
Sbjct: 55 RWPNLFHIL 63
>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate
Query: 2 RWANLYFLF 10
RW NL+ +
Sbjct: 55 RWPNLFHIL 63
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 RWANL 6
RW+NL
Sbjct: 2069 RWSNL 2073
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 4 ANLYFLF 10
+ LYFLF
Sbjct: 420 SELYFLF 426
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 4 ANLYFLF 10
+ LYFLF
Sbjct: 420 SELYFLF 426
>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)
Query: 2 RWANLYFLF 10
RW NL+ +
Sbjct: 58 RWPNLFHIL 66
20|Sequence|96|105|LYFLFLVILN
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 LYFLFLVIL 9
++F+F+V+L
Sbjct: 2212 VFFIFMVVL 2220
>sp|UL15A_HCMVM|UNCHARACTERIZED protein UL15A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LYFLFLV 7
L+F+FLV
Sbjct: 82 LWFMFLV 88
>sp|UL15A_HCMVA|UNCHARACTERIZED protein UL15A|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LYFLFLV 7
L+F+FLV
Sbjct: 82 LWFMFLV 88
>sp|IR04_HCMVA|UNCHARACTERIZED protein IRL4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 FLFLVILN 10
FLF++I+N
Sbjct: 126 FLFILIVN 133
>sp|UL78_HCMVM|PROTEIN UL78|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LYFLFLVI 8
L+FLFL++
Sbjct: 125 LFFLFLIL 132
>sp|UL78_HCMVA|UNCHARACTERIZED protein UL78|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LYFLFLVI 8
L+FLFL++
Sbjct: 125 LFFLFLIL 132
>sp|PG170_MONPV|PROTEIN OPG170|Monkeypox virus (MPXV)
Query: 1 LYFLFLVIL 9
+Y LF++++
Sbjct: 1 MYLLFIILM 9
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 2 YFLFLVI 8
YF FLVI
Sbjct: 334 YFTFLVI 340
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 2 YFLFLVI 8
YF FLVI
Sbjct: 339 YFTFLVI 345
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 2 YFLFLVI 8
YF FLVI
Sbjct: 339 YFTFLVI 345
21|Sequence|101|110|LVILNWMPSM
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 VILNWMPSM 10
+++NW P+M
Sbjct: 322 MMMNWSPAM 330
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 VILNWMPSM 10
++LNW P++
Sbjct: 322 MMLNWSPTL 330
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 2 VILNWMPSM 10
++LNW P++
Sbjct: 322 MMLNWSPTL 330
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 VILNWMPSM 10
++LNW P++
Sbjct: 322 MMLNWSPTV 330
>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 NWMPSM 10
NW PS+
Sbjct: 43 NWAPSV 48
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 NWMPSM 10
NW P M
Sbjct: 525 NWKPKM 530
>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 NWMPSM 10
NW PS+
Sbjct: 43 NWAPSV 48
>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)
Query: 5 NWMPSM 10
NW PS+
Sbjct: 43 NWAPSV 48
>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)
Query: 5 NWMPSM 10
NW PS+
Sbjct: 43 NWAPSV 48
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 LVILNWMPSM 10
+ I W P+M
Sbjct: 71 ITIRQWQPAM 80
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 VILNWMPSM 10
+I W+PS+
Sbjct: 854 LIQQWVPSL 862
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 1 LVILNWMPSM 10
LVI W P +
Sbjct: 69 LVIRQWQPDV 78
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 LVILNWMPS 9
L+I W P+
Sbjct: 69 LIIKQWQPN 77
22|Sequence|106|115|WMPSMEVFHR
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 WMPSMEVFHR 10
+MPSM+ F R
Sbjct: 3373 YMPSMKRFRR 3382
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WMPSMEVFHR 10
+MPSM+ F R
Sbjct: 3373 YMPSMKRFRR 3382
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WMPSMEVFHR 10
+MPSM+ F R
Sbjct: 3373 YMPSMKRFRR 3382
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WMPSMEVFHR 10
+MPSM+ F R
Sbjct: 3373 YMPSMKRFRR 3382
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WMPSMEVFHR 10
+MPSM+ F R
Sbjct: 3370 YMPSMKRFRR 3379
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WMPSMEVFHR 10
+MPSM+ F R
Sbjct: 3373 YMPSMKRFRR 3382
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WMPSMEVFH 9
W P++ FH
Sbjct: 1937 WGPAISYFH 1945
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WMPSMEVFH 9
W P++ FH
Sbjct: 1937 WGPAISYFH 1945
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WMPSMEVFH 9
W P++ FH
Sbjct: 1937 WGPAISYFH 1945
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WMPSMEVFH 9
W P++ FH
Sbjct: 1937 WGPAISYFH 1945
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WMPSMEVFH 9
W P++ FH
Sbjct: 1937 WGPAISYFH 1945
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WMPSMEVFH 9
W P++ FH
Sbjct: 1771 WGPAISYFH 1779
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WMPSMEVFH 9
W P++ FH
Sbjct: 1938 WGPAISYFH 1946
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WMPSMEVFH 9
W P++ FH
Sbjct: 1938 WGPAISYFH 1946
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 WMPSMEVFH 9
+ PS+ VFH
Sbjct: 90 YSPSVYVFH 98
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 WMPSMEVFH 9
+ PS+ VFH
Sbjct: 90 YSPSVYVFH 98
>sp|RP35_VAR67|DNA-DIRECTED RNA polymerase 35 kDa|Variola virus (isolate
Query: 2 MPSMEVFHR 10
+P+M++F++
Sbjct: 59 IPTMKIFYK 67
>sp|RP35_VACCT|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 MPSMEVFHR 10
+P+M++F++
Sbjct: 59 IPTMKIFYK 67
>sp|RP35_VACCC|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 MPSMEVFHR 10
+P+M++F++
Sbjct: 59 IPTMKIFYK 67
>sp|RP35_VACCA|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 MPSMEVFHR 10
+P+M++F++
Sbjct: 59 IPTMKIFYK 67
>sp|RP35_MONPV|DNA-DIRECTED RNA polymerase 35 kDa|Monkeypox virus (MPXV)
Query: 2 MPSMEVFHR 10
+P+M++F++
Sbjct: 59 IPTMKIFYK 67
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 WMPSMEV 7
W+P M+V
Sbjct: 864 WVPPMQV 870
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 WMPSMEV 7
W+P +EV
Sbjct: 864 WVPPLEV 870
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WMPSMEVFH 9
W P++ FH
Sbjct: 1935 WGPAISYFH 1943
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 WMPSMEVFH 9
W P++ FH
Sbjct: 1937 WGPAISYFH 1945
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 4 SMEVFHR 10
S+E+FH+
Sbjct: 54 SLELFHK 60
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PSMEVFH 9
PS+ VFH
Sbjct: 89 PSVFVFH 95
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PSMEVFH 9
PS+ VFH
Sbjct: 89 PSVFVFH 95
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 WMPSMEV 7
W P M+V
Sbjct: 864 WAPPMQV 870
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 WMPSMEVF 8
WM ++E F
Sbjct: 2193 WMKNLETF 2200
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 4 SMEVFHR 10
S+E+FH+
Sbjct: 56 SLELFHQ 62
23|Sequence|111|120|EVFHREITML
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 EVFHREITM 9
E H+++TM
Sbjct: 360 EKLHKQVTM 368
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 VFHREITML 10
V+H +TML
Sbjct: 200 VYHGAVTML 208
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 2 VFHREIT 8
+FH +IT
Sbjct: 206 IFHNQIT 212
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 2 VFHREIT 8
+FH +IT
Sbjct: 210 IFHNQIT 216
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 2 VFHREIT 8
+FH +IT
Sbjct: 210 IFHNQIT 216
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 2 VFHREIT 8
+FH +IT
Sbjct: 210 IFHNQIT 216
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 EVFHREITML 10
E +RE TML
Sbjct: 357 EEMYREYTML 366
>sp|OX2V_HHV6Z|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6B (strain
Query: 1 EVFHREITML 10
EV+ R+I M+
Sbjct: 181 EVYKRDIPMV 190
24|Sequence|116|125|EITMLPLAIV
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 EITMLPLAIV 10
E+TM+PL I+
Sbjct: 104 EMTMMPLLIL 113
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 EITMLP 6
EITM+P
Sbjct: 689 EITMVP 694
25|Sequence|121|130|PLAIVLFVIM
***** No hits found ******
26|Sequence|126|135|LFVIMIKDGM
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 LFVIMIKDGM 10
L+V+++ DGM
Sbjct: 891 LYVLVVVDGM 900
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 FVIMIKDGM 10
+VI +K+G+
Sbjct: 1569 YVIRVKEGL 1577
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 FVIMIKDGM 10
+VI +K+G+
Sbjct: 1570 YVIRVKEGL 1578
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LFVIMIKDGM 10
LF+ +KD +
Sbjct: 1331 LFIFSLKDAL 1340
27|Sequence|131|140|IKDGMEDFKR
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1)
Query: 2 KDGMEDFKR 10
KDG+EDF R
Sbjct: 5 KDGLEDFLR 13
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 2 KDGMEDFKR 10
KDG+EDF R
Sbjct: 5 KDGLEDFLR 13
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 2 KDGMEDFKR 10
KDG+EDF R
Sbjct: 5 KDGLEDFLR 13
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 IKDGMEDFKR 10
++DG ++FKR
Sbjct: 1598 LRDGTQNFKR 1607
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 IKDGMEDFKR 10
++DG ++FKR
Sbjct: 1598 LRDGTQNFKR 1607
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 IKDGMEDFKR 10
++DG ++FKR
Sbjct: 1598 LRDGTQNFKR 1607
>sp|VL2_HPV22|MINOR capsid protein L2|Human papillomavirus 22
Query: 1 IKDGMEDFKR 10
+ +G+EDF R
Sbjct: 429 LDNGVEDFSR 438
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 2 KDGMEDF 8
+DG EDF
Sbjct: 814 EDGAEDF 820
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 1 IKDGMEDFKR 10
+K G E+F R
Sbjct: 512 VKQGHEEFLR 521
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 KDGMEDF 8
K G+EDF
Sbjct: 6306 KYGLEDF 6312
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 KDGMEDF 8
K G+EDF
Sbjct: 6335 KYGLEDF 6341
>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9
Query: 1 IKDGMEDF 8
+ +G+EDF
Sbjct: 439 LDEGVEDF 446
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 3 DGMEDFK 9
+G+EDF+
Sbjct: 95 NGLEDFE 101
28|Sequence|136|145|EDFKRHRFDK
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 3 FKRHRFD 9
KRHR D
Sbjct: 449 LKRHRLD 455
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 3 FKRHRF 8
FK HRF
Sbjct: 292 FKNHRF 297
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 FKRHRF 8
FK HRF
Sbjct: 292 FKNHRF 297
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 2 DFKRHRFD 9
DFK RFD
Sbjct: 345 DFKIGRFD 352
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 EDFKRHRF 8
+DF +H F
Sbjct: 422 QDFHKHLF 429
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 3 FKRHRFDK 10
F RH F+K
Sbjct: 256 FARHFFNK 263
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 KRHRFDK 10
K+H+ DK
Sbjct: 208 KKHKLDK 214
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 KRHRFDK 10
K+H+ DK
Sbjct: 208 KKHKLDK 214
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 4 KRHRFDK 10
K+H+ DK
Sbjct: 208 KKHKLDK 214
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 KRHRFDK 10
K+H+ DK
Sbjct: 208 KKHKLDK 214
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 1 EDFKRH 6
ED++RH
Sbjct: 88 EDWRRH 93
29|Sequence|141|150|HRFDKAINCS
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 2 RFDKAINCS 10
RFD+ I+CS
Sbjct: 51 RFDRDISCS 59
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RFDKAINCS 10
RFD+ I+CS
Sbjct: 51 RFDRDISCS 59
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 2 RFDKAINCS 10
RFD+ I+CS
Sbjct: 51 RFDRDISCS 59
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 HRFDKAINCS 10
HRF+ NC+
Sbjct: 2159 HRFNHTRNCT 2168
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 HRFDKAINCS 10
HRF+ NC+
Sbjct: 2159 HRFNHTRNCT 2168
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 2 RFDKAINCS 10
RFD+ ++C+
Sbjct: 48 RFDREVSCA 56
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 1 HRFDKAINC 9
HR+ +NC
Sbjct: 244 HRYGTTVNC 252
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 1 HRFDKAINC 9
HR+ +NC
Sbjct: 258 HRYGTTVNC 266
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 1 HRFDKAINC 9
HR+ +NC
Sbjct: 258 HRYGTTVNC 266
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 1 HRFDKAINC 9
HR+ +NC
Sbjct: 263 HRYGTTVNC 271
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 1 HRFDKAINC 9
HR+ +NC
Sbjct: 263 HRYGTTVNC 271
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 1 HRFDKAINC 9
HR+ +NC
Sbjct: 263 HRYGTTVNC 271
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 FDKAINCS 10
FD A NC+
Sbjct: 153 FDNAFNCT 160
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 1 HRFDKAINC 9
HR+ +NC
Sbjct: 262 HRYGTTVNC 270
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 HRFDKAINCS 10
H F + NCS
Sbjct: 298 HNFTQECNCS 307
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1452 FDSVIDCN 1459
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 HRFDKAINCS 10
H F + NCS
Sbjct: 298 HNFTQECNCS 307
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1452 FDSVIDCN 1459
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 1 HRFDKAINCS 10
H F + NCS
Sbjct: 298 HNFTQECNCS 307
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 1 HRFDKAINCS 10
H DK+++CS
Sbjct: 35 HTSDKSLSCS 44
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HRFDKAINCS 10
H DK+++CS
Sbjct: 35 HTSDKSLSCS 44
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 1 HRFDKAINCS 10
H DK+++CS
Sbjct: 35 HTSDKSLSCS 44
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 HRFDKAINCS 10
H DK+++CS
Sbjct: 35 HTSDKSLSCS 44
>sp|PG045_VACCA|APOPTOSIS regulator OPG045|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HRFDKAIN 8
+RFDK+ N
Sbjct: 43 YRFDKSTN 50
>sp|PG045_VACCT|APOPTOSIS regulator OPG045|Vaccinia virus (strain Tian Tan)
Query: 1 HRFDKAIN 8
+RFDK+ N
Sbjct: 47 YRFDKSTN 54
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 1 HRFDKAINCS 10
HR INC+
Sbjct: 56 HRILDGINCT 65
>sp|PG045_VACCC|APOPTOSIS regulator OPG045|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HRFDKAIN 8
+RFDK+ N
Sbjct: 47 YRFDKSTN 54
>sp|PG045_MONPV|APOPTOSIS regulator OPG045|Monkeypox virus (MPXV)
Query: 1 HRFDKAIN 8
+RFDK+ N
Sbjct: 41 YRFDKSTN 48
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 HRFDKAINCS 10
H F + NCS
Sbjct: 298 HHFVQECNCS 307
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1452 FDSVIDCN 1459
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 4 DKAINC 9
DKAI+C
Sbjct: 478 DKAISC 483
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 4 DKAINC 9
DKAI+C
Sbjct: 478 DKAISC 483
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 4 DKAINC 9
DKAI+C
Sbjct: 478 DKAISC 483
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 1 HRFDKAINCS 10
HR INC+
Sbjct: 72 HRILDGINCT 81
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 1 HRFDKAINCS 10
HR INC+
Sbjct: 72 HRILDGINCT 81
>sp|PG045_VACCP|APOPTOSIS regulator OPG045|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 HRFDKAIN 8
+RFDK+ N
Sbjct: 47 YRFDKSTN 54
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 1 HRFDKAINCS 10
HR INC+
Sbjct: 72 HRILDGINCT 81
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 1 HRFDKAINCS 10
HR INC+
Sbjct: 73 HRILDGINCT 82
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 1 HRFDKAINCS 10
HR INC+
Sbjct: 72 HRILDGINCT 81
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 3 FDKAINCS 10
FD+++ CS
Sbjct: 451 FDESVPCS 458
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 RFDKAINCS 10
RFD A+N S
Sbjct: 1413 RFDVALNDS 1421
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 3 FDKAINCS 10
+DKAI C+
Sbjct: 171 WDKAIPCA 178
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 RFDKAIN 8
RF++A+N
Sbjct: 122 RFEEAVN 128
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RFDKAIN 8
RF++A+N
Sbjct: 122 RFEEAVN 128
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RFDKAIN 8
RF++A+N
Sbjct: 122 RFEEAVN 128
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1449 FDSVIDCN 1456
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1450 FDSVIDCN 1457
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1446 FDSVIDCN 1453
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1448 FDSVIDCN 1455
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1453 FDSVIDCN 1460
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1449 FDSVIDCN 1456
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1448 FDSVIDCN 1455
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1454 FDSVIDCN 1461
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1454 FDSVIDCN 1461
Query: 1 HRFDKAINCS 10
HR + NCS
Sbjct: 298 HRTVQTCNCS 307
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1448 FDSVIDCN 1455
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1452 FDSVIDCN 1459
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1453 FDSVIDCN 1460
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1452 FDSVIDCN 1459
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1448 FDSVIDCN 1455
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1452 FDSVIDCN 1459
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1448 FDSVIDCN 1455
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1448 FDSVIDCN 1455
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1448 FDSVIDCN 1455
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1448 FDSVIDCN 1455
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1449 FDSVIDCN 1456
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1452 FDSVIDCN 1459
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1448 FDSVIDCN 1455
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1448 FDSVIDCN 1455
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1448 FDSVIDCN 1455
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1448 FDSVIDCN 1455
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1453 FDSVIDCN 1460
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 FDKAINCS 10
FD I+C+
Sbjct: 1448 FDSVIDCN 1455
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 HRFDKAINCS 10
H F + NCS
Sbjct: 298 HTFVQDCNCS 307
>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)
Query: 3 FDKAINC 9
FD +NC
Sbjct: 205 FDTILNC 211
>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)
Query: 1 HRFDKAINCS 10
HR+ + I C+
Sbjct: 192 HRWKRVIRCN 201
>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 FDKAINC 9
FD +NC
Sbjct: 205 FDTILNC 211
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 3 FDKAINC 9
+DKAI C
Sbjct: 169 WDKAIPC 175
30|Sequence|146|155|AINCSNIRIY
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 1 AINCSNI 7
AINCSN+
Sbjct: 410 AINCSNL 416
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 INCSNIR 8
+NC+N+R
Sbjct: 200 MNCANVR 206
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 3 NCSNIRIY 10
+C+++RIY
Sbjct: 265 SCADMRIY 272
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 INCSNIR 8
+NC+N+R
Sbjct: 125 LNCTNVR 131
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 1 AINCSNI 7
AINCS I
Sbjct: 554 AINCSKI 560
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 INCSNIR 8
+NC+N+R
Sbjct: 128 LNCTNLR 134
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 3 NCSNIRIY 10
+C+ +RIY
Sbjct: 272 SCAEMRIY 279
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 3 NCSNIRIY 10
+C+ +RIY
Sbjct: 270 SCAEMRIY 277
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 3 NCSNIRIY 10
NC N IY
Sbjct: 446 NCGNSEIY 453
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 4 CSNIRI 9
CSNI++
Sbjct: 24 CSNIKL 29
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 4 CSNIRI 9
CSNI++
Sbjct: 24 CSNIKL 29
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 INCSNI 7
++CSNI
Sbjct: 1876 VDCSNI 1881
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 INCSNIRIY 10
+ C+ IR Y
Sbjct: 797 LRCARIRYY 805
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 INCSNI 7
++CSNI
Sbjct: 1876 VDCSNI 1881
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 INCSNI 7
++CSNI
Sbjct: 1876 VDCSNI 1881
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 INCSNI 7
++CSNI
Sbjct: 1876 VDCSNI 1881
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 INCSNI 7
++CSNI
Sbjct: 1876 VDCSNI 1881
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 AINCSNIR 8
A+NCS ++
Sbjct: 110 AMNCSRVQ 117
31|Sequence|151|160|NIRIYERKEQ
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 2 IRIYERKE 9
+R+Y+R+E
Sbjct: 354 VRMYKRQE 361
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 1 NIRIYER 7
N+RI+E+
Sbjct: 154 NLRIFEK 160
>sp|C8_VACCC|PROTEIN C8|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NIRIYERKE 9
NI+ Y R E
Sbjct: 96 NIQFYSRDE 104
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 NIRIYER 7
N+RI+E+
Sbjct: 153 NLRIFEK 159
32|Sequence|156|165|ERKEQTYVQK
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 ERKEQTY 7
E+KEQ Y
Sbjct: 797 EKKEQAY 803
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 ERKEQTY 7
E+KEQ Y
Sbjct: 797 EKKEQAY 803
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 ERKEQTY 7
E+KEQ Y
Sbjct: 797 EKKEQAY 803
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 ERKEQTYVQ 9
ERK Y+Q
Sbjct: 1218 ERKINNYIQ 1226
>sp|PHOSP_VSNJO|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 1 ERKEQTYVQ 9
ER+E Y+Q
Sbjct: 29 ERREDKYLQ 37
33|Sequence|161|170|TYVQKCWKDV
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 TYVQKCWKDV 10
T V+ CWK +
Sbjct: 473 TSVESCWKKI 482
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 2 YVQKCWK 8
+VQKC+K
Sbjct: 132 FVQKCFK 138
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 1 TYVQKCWKDV 10
T V+ CW+ +
Sbjct: 476 TAVENCWEKI 485
>sp|VE2_HPV61|REGULATORY protein E2|Human papillomavirus type 61
Query: 1 TYVQKCWK 8
T Q+CWK
Sbjct: 106 TQPQRCWK 113
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 3 VQKCWKDV 10
++ CW DV
Sbjct: 114 LESCWPDV 121
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 3 VQKCWKDV 10
++ CW DV
Sbjct: 114 LESCWPDV 121
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 3 VQKCWKDV 10
++ CW DV
Sbjct: 114 LESCWPDV 121
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 VQKCWKDV 10
++ CW DV
Sbjct: 114 LESCWPDV 121
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 410 QGCWK 414
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 3 VQKCWKDV 10
++ CW DV
Sbjct: 114 LESCWPDV 121
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 408 QGCWK 412
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 409 QGCWK 413
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 3 VQKCWKDV 10
++ CW DV
Sbjct: 114 LESCWPDV 121
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 TYVQKCWKD 9
T V+K W D
Sbjct: 19 TEVEKLWND 27
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 409 QGCWK 413
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 410 QGCWK 414
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 YVQKCWKDV 10
Y++K +KD+
Sbjct: 5265 YIEKLYKDL 5273
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 411 QGCWK 415
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 409 QGCWK 413
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 410 QGCWK 414
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 410 QGCWK 414
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 1 TYVQKCWKD 9
T V+K W D
Sbjct: 19 TEVEKLWND 27
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 KCWK 8
KCWK
Sbjct: 87 KCWK 90
>sp|GO_HHV7J|GLYCOPROTEIN U47 homolog|Human herpesvirus 7 (strain JI)
Query: 1 TYVQKC 6
TY+Q C
Sbjct: 61 TYIQSC 66
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 1 TYVQKCWK 8
T V+ CW+
Sbjct: 476 TAVENCWE 483
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 410 QGCWK 414
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 410 QGCWK 414
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 410 QGCWK 414
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 408 QGCWK 412
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 410 QGCWK 414
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 410 QGCWK 414
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 410 QGCWK 414
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 411 QGCWK 415
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 409 QGCWK 413
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 410 QGCWK 414
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 409 QGCWK 413
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 408 QGCWK 412
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 408 QGCWK 412
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 410 QGCWK 414
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 1 TYVQKCWK 8
T +KCWK
Sbjct: 104 TVPKKCWK 111
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 TYVQKCWKD 9
TYV C K+
Sbjct: 1229 TYVTNCIKE 1237
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 TYVQKCWKD 9
TYV C K+
Sbjct: 1229 TYVTNCIKE 1237
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 QKCWK 8
Q CWK
Sbjct: 409 QGCWK 413
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 1 TYVQKCWK 8
T +KCWK
Sbjct: 104 TVPKKCWK 111
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 QKCWKDV 10
K WKD+
Sbjct: 840 HKKWKDI 846
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 TYVQKCWKD 9
T +QK W D
Sbjct: 120 TGLQKLWVD 128
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 TYVQKCWKD 9
T +QK W D
Sbjct: 120 TGLQKLWVD 128
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 TYVQKCWKD 9
T +QK W D
Sbjct: 120 TGLQKLWVD 128
34|Sequence|166|175|CWKDVRVGDF
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 CWKDVRVG 8
CW+ +R+G
Sbjct: 751 CWEALRIG 758
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CWKDVRVG 8
CW+ +R+G
Sbjct: 1074 CWEALRIG 1081
>sp|A57_VACCC|GUANYLATE kinase homolog|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 WKDVRVGDF 10
WK + G+F
Sbjct: 17 WKGIAAGNF 25
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 2 WKDVRV 7
W DVRV
Sbjct: 274 WTDVRV 279
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 2 WKDVRV 7
W DVRV
Sbjct: 275 WTDVRV 280
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 WKDVRVGD 9
W+D R G+
Sbjct: 491 WEDRRAGE 498
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 WKDVRVGDF 10
++D R+G F
Sbjct: 293 YEDARIGGF 301
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 WKDVRVGDF 10
W +RV +F
Sbjct: 920 WNSIRVEEF 928
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 CWKDVRVGD 9
C++D+R D
Sbjct: 758 CFEDLRPSD 766
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 CWKDVRVGD 9
C++D+R D
Sbjct: 760 CFEDLRPSD 768
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 CWKDVRVGD 9
C++D+R D
Sbjct: 761 CFEDLRPSD 769
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 CWKDVRVGD 9
C++D+R D
Sbjct: 758 CFEDLRPSD 766
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 WKDVRV 7
WKD R+
Sbjct: 2087 WKDARM 2092
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 WKDVRV 7
WKD R+
Sbjct: 2087 WKDARM 2092
35|Sequence|171|180|RVGDFIQMKC
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 DFIQMKC 10
D++Q KC
Sbjct: 518 DYVQHKC 524
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 DFIQMKC 10
D++Q KC
Sbjct: 487 DYVQCKC 493
Query: 3 GDFIQ 7
GDFIQ
Sbjct: 4627 GDFIQ 4631
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 DFIQMKC 10
D++Q KC
Sbjct: 487 DYVQCKC 493
Query: 3 GDFIQ 7
GDFIQ
Sbjct: 4647 GDFIQ 4651
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 DFIQMKC 10
D++Q KC
Sbjct: 487 DYVQCKC 493
Query: 3 GDFIQ 7
GDFIQ
Sbjct: 4677 GDFIQ 4681
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 DFIQMKC 10
D++Q KC
Sbjct: 518 DYVQHKC 524
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 DFIQMKC 10
D++Q KC
Sbjct: 487 DYVQCKC 493
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 DFIQMKC 10
D++Q KC
Sbjct: 487 DYVQCKC 493
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 DFIQMKC 10
D++Q KC
Sbjct: 487 DYVQCKC 493
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 VGDFIQ 7
+GDFIQ
Sbjct: 6640 LGDFIQ 6645
>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)
Query: 1 RVGDFIQMK 9
R+GD+++ +
Sbjct: 5 RIGDYVKTR 13
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GDFIQ 7
GDFIQ
Sbjct: 4612 GDFIQ 4616
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 RVGDFI 6
RVGDF+
Sbjct: 850 RVGDFL 855
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GDFIQM 8
GDF+Q+
Sbjct: 4589 GDFVQV 4594
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 4 DFIQMKC 10
DF++++C
Sbjct: 462 DFVRLQC 468
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 4 DFIQMKC 10
DF++++C
Sbjct: 462 DFVRLQC 468
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 2 VGDFIQMKC 10
VG+ ++++C
Sbjct: 45 VGETVELRC 53
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 VGDFIQMK 9
VG+F++++
Sbjct: 982 VGEFVELR 989
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 VGDFIQMKC 10
+G FI KC
Sbjct: 430 MGHFILAKC 438
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 VGDFIQMKC 10
+G FI KC
Sbjct: 421 MGHFILAKC 429
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 2 VGDFIQMKC 10
+G FI KC
Sbjct: 430 MGHFILAKC 438
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 3 GDFIQMKC 10
G+F KC
Sbjct: 23 GEFYHFKC 30
36|Sequence|176|185|IQMKCNEIVP
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 5 CNEIVP 10
CN I+P
Sbjct: 569 CNRIIP 574
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 KCNEIVP 10
KC+ I+P
Sbjct: 5639 KCSRIIP 5645
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 KCNEIVP 10
KC+ I+P
Sbjct: 5630 KCSRIIP 5636
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 KCNEIVP 10
KC+ I+P
Sbjct: 5653 KCSRIIP 5659
>sp|NCAP_SINV|NUCLEOPROTEIN Nombre orthohantavirus (SNV) (Sin
Query: 3 MKCNEIVP 10
MK +EI P
Sbjct: 188 MKADEITP 195
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 5 CNEIVP 10
CN IVP
Sbjct: 76 CNHIVP 81
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 KCNEIVP 10
KC I+P
Sbjct: 5300 KCTRIIP 5306
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 3 MKCNEIVP 10
MK +EI P
Sbjct: 188 MKADEITP 195
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 KCNEIVP 10
KC I+P
Sbjct: 5325 KCTRIIP 5331
>sp|NCAP_BCCV|NUCLEOPROTEIN Creek Canal orthohantavirus (BCCV)
Query: 3 MKCNEIVP 10
MK +EI P
Sbjct: 188 MKADEITP 195
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 CNEIVP 10
CN +VP
Sbjct: 2657 CNNLVP 2662
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 5 CNEIVP 10
CN +VP
Sbjct: 2657 CNNLVP 2662
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 1 IQMKCNEIV 9
IQ+KC I+
Sbjct: 562 IQLKCPPIL 570
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 5 CNEIVP 10
CN I+P
Sbjct: 569 CNRIMP 574
37|Sequence|181|190|NEIVPADILL
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 NEIVPADI 8
N IVPAD+
Sbjct: 529 NIIVPADV 536
>sp|VU84_HHV7J|PROTEIN U84|Human herpesvirus 7 (strain JI)
Query: 5 PADILL 10
PADILL
Sbjct: 269 PADILL 274
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 VPADILL 10
VPA+ILL
Sbjct: 2270 VPAEILL 2276
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 2 EIVPAD 7
E+VPAD
Sbjct: 392 EVVPAD 397
>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65
Query: 1 NEIVPADIL 9
+EI+P D++
Sbjct: 97 SEIIPVDVV 105
>sp|VE7_HPV39|PROTEIN E7|Human papillomavirus 39
Query: 1 NEIVPADIL 9
NEI P D++
Sbjct: 19 NEIQPVDLV 27
>sp|VE7_HPV70|PROTEIN E7|Human papillomavirus type 70
Query: 1 NEIVPADIL 9
NEI P D++
Sbjct: 19 NEIQPVDLV 27
>sp|VE7_HPV68|PROTEIN E7|Human papillomavirus 68
Query: 1 NEIVPADIL 9
NEI P D++
Sbjct: 19 NEIQPVDLV 27
>sp|VE7_HPV45|PROTEIN E7|Human papillomavirus 45
Query: 1 NEIVPADIL 9
NE+ P D+L
Sbjct: 19 NELDPVDLL 27
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 1 NEIVPADILL 10
N+I+ D+LL
Sbjct: 138 NDILETDLLL 147
>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)
Query: 1 NEIVPADILL 10
N+I+ D+LL
Sbjct: 139 NDILETDLLL 148
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 IVPADILL 10
+VP D+++
Sbjct: 279 VVPGDVII 286
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 IVPADILL 10
+VP D+++
Sbjct: 279 VVPGDVII 286
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 1 NEIVPADIL 9
N+++P D L
Sbjct: 42 NDVIPLDSL 50
>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 EIVPADI 8
EI PAD+
Sbjct: 49 EITPADL 55
38|Sequence|186|195|ADILLLFSSD
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 1 ADILLLFSS 9
+DILL FSS
Sbjct: 34 SDILLRFSS 42
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 1 ADILLLFSS 9
+DILL FSS
Sbjct: 34 SDILLKFSS 42
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 1 ADILLLFSS 9
+DILL FSS
Sbjct: 34 SDILLKFSS 42
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DILLLFSSD 10
D+L++FS D
Sbjct: 2084 DVLIVFSRD 2092
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DILLLFSSD 10
D+L++FS D
Sbjct: 2084 DVLIVFSRD 2092
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DILLLFSSD 10
D+L++FS D
Sbjct: 2084 DVLIVFSRD 2092
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DILLLFSSD 10
D+L++FS D
Sbjct: 2084 DVLIVFSRD 2092
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DILLLFSSD 10
D+L++FS D
Sbjct: 2084 DVLIVFSRD 2092
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DILLLFSSD 10
D+L++FS D
Sbjct: 2084 DVLIVFSRD 2092
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DILLLFSSD 10
D+L++FS D
Sbjct: 1918 DVLIVFSRD 1926
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 1 ADILLLFSS 9
+D+LL FSS
Sbjct: 34 SDVLLKFSS 42
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DILLLFSSD 10
D+L++FS D
Sbjct: 2082 DVLVVFSRD 2090
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 1 ADILLLFSS 9
+DILL FS+
Sbjct: 34 SDILLKFST 42
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 4 LLLFSSD 10
LLLFSS+
Sbjct: 884 LLLFSSE 890
39|Sequence|191|200|LFSSDPNGIC
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 FSSDPNGIC 10
FSSD NG+C
Sbjct: 252 FSSDWNGVC 260
>sp|PG190_VACCT|PROTEIN OPG190|Vaccinia virus (strain Tian Tan)
Query: 3 SSDPNGIC 10
SSDPN +C
Sbjct: 54 SSDPNAVC 61
>sp|PG190_VACCL|PROTEIN OPG190|Vaccinia virus (strain Lister) (VACV)
Query: 3 SSDPNGIC 10
SSDPN +C
Sbjct: 54 SSDPNAVC 61
>sp|PG190_VACCC|PROTEIN OPG190|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 SSDPNGIC 10
SSDPN +C
Sbjct: 54 SSDPNAVC 61
>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)
Query: 3 SSDPNGIC 10
SSDPN +C
Sbjct: 54 SSDPNAVC 61
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 FSSDPNGIC 10
SSD NG+C
Sbjct: 252 LSSDWNGVC 260
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LFSSDPNGIC 10
L+ DP G+C
Sbjct: 152 LYMIDPAGVC 161
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LFSSDPNGIC 10
L+ DP G+C
Sbjct: 152 LYMIDPAGVC 161
>sp|PG034_VAR67|PROTEIN OPG034|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LFSSDPNGI 9
+ S+DPN I
Sbjct: 2 IMSTDPNNI 10
>sp|VB05_VACC8|TRUNCATED plaque-size/host range protein|Vaccinia virus (strain LC16m8)
Query: 3 SSDPNGIC 10
S DPN +C
Sbjct: 54 SLDPNAVC 61
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 SSDPNGI 9
SSDPN +
Sbjct: 65 SSDPNAL 71
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 SSDPNGI 9
SSDPN +
Sbjct: 65 SSDPNAL 71
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 3 SSDPNGI 9
SSDPN +
Sbjct: 65 SSDPNAL 71
>sp|PAX_I02A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 SSDPNGI 9
SSDPN +
Sbjct: 65 SSDPNAL 71
>sp|PAX_I01A3|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 3 SSDPNGI 9
SSDPN +
Sbjct: 65 SSDPNAL 71
>sp|PAX_I01A0|PROTEIN PA-X|Influenza A virus (strain A/Silky
Query: 3 SSDPNGI 9
SSDPN +
Sbjct: 65 SSDPNAL 71
>sp|PG145_VARV|TRANSCRIPT termination protein OPG145|Variola virus
Query: 4 SDPNGIC 10
SDP +C
Sbjct: 468 SDPTSVC 474
>sp|PG145_VAR67|TRANSCRIPT termination protein OPG145|Variola virus (isolate
Query: 4 SDPNGIC 10
SDP +C
Sbjct: 468 SDPTSVC 474
>sp|A18_VACCT|TRANSCRIPT termination protein A18|Vaccinia virus (strain Tian Tan)
Query: 4 SDPNGIC 10
SDP +C
Sbjct: 468 SDPTSVC 474
>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)
Query: 3 SSDPNGIC 10
S DPN +C
Sbjct: 54 SLDPNAVC 61
>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)
Query: 3 SSDPNGIC 10
S DPN +C
Sbjct: 54 SLDPNAVC 61
>sp|PG145_VACCC|TRANSCRIPT termination protein OPG145|Vaccinia virus (strain Copenhagen)
Query: 4 SDPNGIC 10
SDP +C
Sbjct: 468 SDPTSVC 474
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 FSSDPNGIC 10
SSD NG C
Sbjct: 252 LSSDWNGAC 260
>sp|A18_VACCA|TRANSCRIPT termination protein A18|Vaccinia virus (strain Ankara) (VACV)
Query: 4 SDPNGIC 10
SDP +C
Sbjct: 468 SDPTSVC 474
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 FSSDPNGIC 10
SSD NG C
Sbjct: 252 LSSDWNGAC 260
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LFSSDP 6
LF SDP
Sbjct: 490 LFGSDP 495
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 4 SDPNGIC 10
S PN +C
Sbjct: 208 SHPNSVC 214
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 4 SDPNGIC 10
S PN +C
Sbjct: 208 SHPNSVC 214
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 4 SDPNGIC 10
S PN +C
Sbjct: 208 SHPNSVC 214
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 6 PNGIC 10
PNG C
Sbjct: 116 PNGTC 120
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 1 LFSSDPNGIC 10
L S+P G C
Sbjct: 319 LLRSEPGGNC 328
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 1 LFSSDPNGIC 10
L S+P G C
Sbjct: 319 LLRSEPGGNC 328
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 LFSSDPN 7
+FSS PN
Sbjct: 401 IFSSGPN 407
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LFSSDPNGIC 10
+ +SD GIC
Sbjct: 196 VINSDYRGIC 205
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LFSSDPNGIC 10
+ +SD GIC
Sbjct: 196 VINSDYRGIC 205
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 FSSDPNGI 9
F S P+GI
Sbjct: 199 FCSQPSGI 206
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 FSSDPNGI 9
F S P+GI
Sbjct: 199 FCSQPSGI 206
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 FSSDPNGI 9
F S P+GI
Sbjct: 199 FCSQPSGI 206
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 FSSDPNGI 9
F S P+GI
Sbjct: 192 FCSQPSGI 199
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 FSSDPNGI 9
F S P+GI
Sbjct: 192 FCSQPSGI 199
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 FSSDPNGI 9
F S P+GI
Sbjct: 199 FCSQPSGI 206
40|Sequence|196|205|PNGICHLETA
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 PNGICHLET 9
PN +CH+ T
Sbjct: 210 PNSVCHVAT 218
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 PNGICHLET 9
PN +CH+ T
Sbjct: 210 PNSVCHVAT 218
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 PNGICHLET 9
PN +CH+ T
Sbjct: 210 PNSVCHVAT 218
>sp|US10_VZVD|VIRION protein US10 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PNGICH 6
P GICH
Sbjct: 154 PGGICH 159
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PNGICHL 7
PN CHL
Sbjct: 258 PNSRCHL 264
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PNGICHL 7
PN CHL
Sbjct: 258 PNSRCHL 264
>sp|YVKB_VACCC|UNCHARACTERIZED 9.0 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NGICHL 7
NG CH+
Sbjct: 22 NGYCHV 27
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 NGICHL 7
NG+C L
Sbjct: 257 NGVCKL 262
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 NGICHL 7
NG+C L
Sbjct: 257 NGVCKL 262
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 NGICH 6
+GICH
Sbjct: 2023 DGICH 2027
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 PNGIC 5
P+GIC
Sbjct: 1978 PSGIC 1982
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 PNGICHLET 9
P G+ HL T
Sbjct: 649 PQGLPHLRT 657
41|Sequence|201|210|HLETASLDGE
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HLETASLDGE 10
HLE A DGE
Sbjct: 1451 HLEGAREDGE 1460
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HLETASLDGE 10
HLE A DGE
Sbjct: 1450 HLEGAREDGE 1459
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HLETASLDGE 10
HLE A DGE
Sbjct: 1451 HLEGAREDGE 1460
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HLETASLDGE 10
HLE A DGE
Sbjct: 1452 HLEGAREDGE 1461
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HLETASLDGE 10
HLE A DGE
Sbjct: 1453 HLEGAREDGE 1462
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 HLETASLDGE 10
H++ LDGE
Sbjct: 1413 HMKVCKLDGE 1422
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 HLETASLDGE 10
H++ LDGE
Sbjct: 1413 HMKVCRLDGE 1422
>sp|GP_PUUMU|ENVELOPE glycoprotein|Puumala virus (strain Udmurtia/894CG/91)
Query: 2 LETASLDG 9
L TAS+DG
Sbjct: 71 LSTASIDG 78
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 2 LETASLDG 9
L TAS+DG
Sbjct: 983 LATASIDG 990
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 2 LETASLDG 9
L TAS+DG
Sbjct: 983 LATASIDG 990
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 LETASLDG 9
L TAS+DG
Sbjct: 983 LATASIDG 990
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HLETASLDGE 10
HLE DGE
Sbjct: 1452 HLEGTREDGE 1461
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 2 LETASLDG 9
LET ++DG
Sbjct: 330 LETVAIDG 337
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HLETASLDGE 10
HLE A +GE
Sbjct: 1451 HLEGARENGE 1460
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 LETASLDG 9
LET ++DG
Sbjct: 330 LETVAIDG 337
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 LETASLDG 9
LET ++DG
Sbjct: 330 LETVAIDG 337
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 LETASLDG 9
LET ++DG
Sbjct: 330 LETVAIDG 337
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 LETASLDG 9
LET ++DG
Sbjct: 330 LETVAIDG 337
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 LETASLDG 9
LET ++DG
Sbjct: 330 LETVAIDG 337
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 1 HLETASLD 8
HL+ SLD
Sbjct: 433 HLQIGSLD 440
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 HLETASLDGE 10
H++ LDG+
Sbjct: 1413 HMKVCRLDGD 1422
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 HLETASLDGE 10
H++ L+GE
Sbjct: 1414 HMKVCKLEGE 1423
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 HLETASLDGE 10
H++ L+GE
Sbjct: 1414 HMKVCKLEGE 1423
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 HLETASLDGE 10
HL T ++GE
Sbjct: 45 HLATKLIEGE 54
42|Sequence|206|215|SLDGETNLKQ
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 LDGETNLK 9
+DG TN+K
Sbjct: 1918 IDGRTNIK 1925
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 LDGETNLK 9
+DG TN+K
Sbjct: 1918 IDGRTNIK 1925
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 LDGETNLK 9
+DG TN+K
Sbjct: 1919 IDGRTNIK 1926
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 LDGETNLK 9
+DG TN+K
Sbjct: 1918 IDGRTNIK 1925
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 LDGETNLK 9
+DG TN+K
Sbjct: 1918 IDGRTNIK 1925
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 LDGETNLK 9
+DG TN+K
Sbjct: 1918 IDGRTNIK 1925
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 LDGETNLK 9
+DG TN+K
Sbjct: 1918 IDGRTNIK 1925
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 LDGETNLK 9
+DG TN+K
Sbjct: 1920 IDGRTNIK 1927
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 LDGETNLK 9
+DG TN+K
Sbjct: 1920 IDGRTNIK 1927
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 LDGETNLK 9
+DG TN+K
Sbjct: 1918 IDGRTNIK 1925
>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus
Query: 1 SLDGETNL 8
SL+G+TN
Sbjct: 285 SLEGKTNF 292
>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 SLDGETNL 8
SL+G+TN
Sbjct: 285 SLEGKTNF 292
>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 SLDGETNL 8
SL+G+TN
Sbjct: 285 SLEGKTNF 292
>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SLDGETNL 8
SL+G+TN
Sbjct: 285 SLEGKTNF 292
>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)
Query: 1 SLDGETNL 8
SL+G+TN
Sbjct: 285 SLEGKTNF 292
>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)
Query: 1 SLDGETNL 8
SL+G+TN
Sbjct: 285 SLEGKTNF 292
>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)
Query: 1 SLDGETNL 8
SL+G+TN
Sbjct: 290 SLEGKTNF 297
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 5 ETNLKQ 10
ETNLKQ
Sbjct: 11 ETNLKQ 16
43|Sequence|211|220|TNLKQRCVVK
>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NLKQRCVV 9
N+K RCVV
Sbjct: 89 NIKGRCVV 96
>sp|PP71_HCMVA|PROTEIN pp71|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NLKQRCVV 9
N+K RCVV
Sbjct: 89 NIKGRCVV 96
>sp|GL_HHV7J|ENVELOPE glycoprotein L|Human herpesvirus 7 (strain JI)
Query: 1 TNLKQRCV 8
+NL+Q C+
Sbjct: 27 SNLEQECI 34
>sp|VPAP_HHV6Z|DNA polymerase processivity factor|Human herpesvirus 6B (strain Z29)
Query: 4 KQRCVV 9
+QRCVV
Sbjct: 361 RQRCVV 366
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 TNLKQRCV 8
TN+ Q CV
Sbjct: 1636 TNVAQMCV 1643
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 TNLKQRCV 8
TN+ Q CV
Sbjct: 1636 TNVAQMCV 1643
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 TNLKQRCV 8
TN+ Q CV
Sbjct: 1636 TNVAQMCV 1643
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 TNLKQRCV 8
TN+ Q CV
Sbjct: 1636 TNVAQMCV 1643
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 TNLKQRCV 8
TN+ Q CV
Sbjct: 1636 TNVAQMCV 1643
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 4 KQRCVV 9
+QRCVV
Sbjct: 383 RQRCVV 388
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 4 KQRCVV 9
+QRCVV
Sbjct: 388 RQRCVV 393
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 LKQRCVVK 10
LKQ C V+
Sbjct: 66 LKQECCVQ 73
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 LKQRCVVK 10
LKQ C V+
Sbjct: 66 LKQECCVQ 73
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 4 KQRCVVK 10
K+RCV K
Sbjct: 678 KKRCVKK 684
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 4 KQRCVVK 10
K+RCV K
Sbjct: 678 KKRCVKK 684
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 NLKQRCV 8
NLK CV
Sbjct: 4114 NLKSNCV 4120
44|Sequence|216|225|RCVVKGFSQQ
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 2 CVVKGF 7
C+VKGF
Sbjct: 30 CIVKGF 35
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 1 RCVVKGF 7
+C+ KGF
Sbjct: 380 QCITKGF 386
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 CVVKG 6
CVVKG
Sbjct: 3193 CVVKG 3197
>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 RCVVKGF 7
RC+ GF
Sbjct: 193 RCIKSGF 199
>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)
Query: 1 RCVVKGF 7
RC+ GF
Sbjct: 188 RCIKSGF 194
>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RCVVKGFS 8
RC +K F+
Sbjct: 135 RCEIKSFA 142
>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)
Query: 1 RCVVKGF 7
RC+ GF
Sbjct: 193 RCIKSGF 199
>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 RCVVKGF 7
RC+ GF
Sbjct: 188 RCIKSGF 194
>sp|NS1_INCAA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Ann
Query: 1 RCVVKGF 7
RC+ GF
Sbjct: 193 RCIKSGF 199
>sp|NS1_INCTA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 RCVVKGF 7
RC+ GF
Sbjct: 188 RCIKSGF 194
>sp|NS1_INCJH|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 RCVVKGF 7
RC+ GF
Sbjct: 188 RCIKSGF 194
>sp|NS1_INCCA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/California/1978)
Query: 1 RCVVKGF 7
RC+ GF
Sbjct: 193 RCIKSGF 199
>sp|NS1_INCGL|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Great
Query: 1 RCVVKGF 7
RC+ GF
Sbjct: 188 RCIKSGF 194
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 CVVKGFSQQ 10
C++K F +Q
Sbjct: 1675 CLMKNFIEQ 1683
45|Sequence|221|230|GFSQQEVQFE
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 1 GFSQQEVQ 8
GF QQ+V+
Sbjct: 145 GFQQQQVR 152
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 3 SQQEVQFE 10
S+QE+Q+E
Sbjct: 334 SKQEMQYE 341
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 1 GFSQQEVQF 9
G + QEVQF
Sbjct: 358 GHALQEVQF 366
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 4 QQEVQFE 10
Q+EVQ+E
Sbjct: 91 QKEVQYE 97
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 4 QQEVQFE 10
Q+EVQ+E
Sbjct: 91 QKEVQYE 97
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 4 QQEVQFE 10
Q+EVQ+E
Sbjct: 91 QKEVQYE 97
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 4 QQEVQFE 10
Q+EVQ+E
Sbjct: 97 QKEVQYE 103
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 4 QQEVQFE 10
Q+EVQ+E
Sbjct: 93 QKEVQYE 99
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 4 QQEVQFE 10
Q+EVQ+E
Sbjct: 90 QKEVQYE 96
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SQQEVQF 9
++QE+QF
Sbjct: 1376 TEQEIQF 1382
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 4 QQEVQFE 10
Q+E+Q+E
Sbjct: 82 QKEIQYE 88
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SQQEVQF 9
++QE+QF
Sbjct: 1375 TEQEIQF 1381
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SQQEVQF 9
++QE+QF
Sbjct: 1376 TEQEIQF 1382
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 SQQEVQ 8
SQQE+Q
Sbjct: 110 SQQEIQ 115
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 4 QQEVQFE 10
Q+E+Q+E
Sbjct: 82 QKEIQYE 88
46|Sequence|226|235|EVQFEPELFH
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 EVQFEPELFH 10
+ + EP +FH
Sbjct: 1775 KTKLEPSVFH 1784
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 EVQFEPELFH 10
+ + EP +FH
Sbjct: 1755 KTKLEPSVFH 1764
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 EVQFEPELFH 10
+ + EP +FH
Sbjct: 1753 KTKLEPSVFH 1762
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 EVQFEPELFH 10
+ + EP +FH
Sbjct: 1745 KTKLEPSVFH 1754
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 EVQFEPELFH 10
+ + EP +FH
Sbjct: 1744 KTKLEPSVFH 1753
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 EVQFEPELFH 10
+ + EP +FH
Sbjct: 1745 KTKLEPSVFH 1754
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 EVQFEPELFH 10
+ + EP +FH
Sbjct: 1745 KTKLEPSVFH 1754
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 EVQFEPELFH 10
+ + EP +FH
Sbjct: 1742 KTKLEPSVFH 1751
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 EVQFEPELFH 10
+ + EP +FH
Sbjct: 1761 KTKLEPSVFH 1770
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 EVQFEPELFH 10
+ + EP +FH
Sbjct: 1755 KTKLEPSVFH 1764
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 QFEPELFH 10
+ EP +FH
Sbjct: 1755 KLEPSVFH 1762
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 QFEPELFH 10
+ EP +FH
Sbjct: 1755 KLEPSVFH 1762
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 EVQFEPELFH 10
+ + EP +FH
Sbjct: 1763 KTKLEPSVFH 1772
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 EVQFEPELFH 10
+ + EP +FH
Sbjct: 1744 KTKLEPSVFH 1753
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 EVQFEPELFH 10
+ + EP +FH
Sbjct: 1754 KTKLEPSVFH 1763
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 EVQFEPELFH 10
+ + EP +FH
Sbjct: 1756 KTKLEPSVFH 1765
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 EVQFEPELFH 10
+ + EP +FH
Sbjct: 1743 KTKLEPSVFH 1752
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 EVQFEPELFH 10
+ + EP +FH
Sbjct: 1753 KTKLEPSVFH 1762
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 QFEPELFH 10
+ EP +FH
Sbjct: 1755 KLEPSVFH 1762
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 QFEPELFH 10
+ EP +FH
Sbjct: 1755 KLEPSVFH 1762
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 EVQFEPEL 8
+VQF+PE
Sbjct: 620 QVQFKPEF 627
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 QFEPELFH 10
+ EP +FH
Sbjct: 1755 KLEPSVFH 1762
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 QFEPELFH 10
+ EP +FH
Sbjct: 1749 KLEPSVFH 1756
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 QFEPELFH 10
+ EP +FH
Sbjct: 1745 KLEPSVFH 1752
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 QFEPELFH 10
+ EP +FH
Sbjct: 1753 KLEPSVFH 1760
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 EVQFEPELFH 10
+ + EP FH
Sbjct: 1767 KTKLEPSAFH 1776
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 EVQFEPELFH 10
+ + EP FH
Sbjct: 1767 KTKLEPSAFH 1776
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 EVQFEPELFH 10
+ + EP FH
Sbjct: 1768 KTKLEPSAFH 1777
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 EVQFEPELFH 10
+ + EP FH
Sbjct: 1768 KTKLEPSAFH 1777
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 EVQFEPELFH 10
+ + EP FH
Sbjct: 1770 KTKLEPSAFH 1779
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 EVQFEPELFH 10
+ + EP FH
Sbjct: 1770 KTKLEPSAFH 1779
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 EVQFEPELFH 10
+ + EP FH
Sbjct: 1767 KTKLEPSAFH 1776
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 2 VQFEPELFH 10
++ +PEL H
Sbjct: 604 IKLDPELVH 612
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 2 VQFEPELF 9
+ EPE+F
Sbjct: 401 IMLEPEVF 408
>sp|75K_PAVHV|UNCHARACTERIZED protein 7.5K|Human parvovirus B19 (strain HV)
Query: 1 EVQFEPEL 8
E QF P+L
Sbjct: 67 EAQFPPKL 74
47|Sequence|231|240|PELFHNTIVC
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 ELFHNTIVC 10
EL+H +VC
Sbjct: 109 ELYHELMVC 117
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 ELFHNTIVC 10
EL+H +VC
Sbjct: 109 ELYHELMVC 117
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 ELFHNTIVC 10
EL+H +VC
Sbjct: 109 ELYHELMVC 117
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 PELFHNTIVC 10
P L H+ IVC
Sbjct: 561 PCLVHDCIVC 570
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 1 PELFHNTIV 9
PEL +NT++
Sbjct: 19 PELKNNTVI 27
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 4 FHNTIVC 10
FHN + C
Sbjct: 137 FHNDVTC 143
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 4 FHNTIVC 10
FHN + C
Sbjct: 137 FHNDVTC 143
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 PELFHNTIV 9
PEL +NT V
Sbjct: 917 PELANNTFV 925
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 PELFHNTIV 9
PEL +NT V
Sbjct: 913 PELANNTFV 921
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 PELFHNTIV 9
PEL +NT V
Sbjct: 917 PELANNTFV 925
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 PELFHNTIVC 10
P L H IVC
Sbjct: 561 PCLVHGCIVC 570
>sp|NEP_INBYA|NUCLEAR export protein|Influenza B virus (strain B/Yamagata/1/1973)
Query: 3 LFHNTIV 9
LFH T++
Sbjct: 82 LFHKTVI 88
>sp|NEP_INBLE|NUCLEAR export protein|Influenza B virus (strain B/Lee/1940)
Query: 3 LFHNTIV 9
LFH T++
Sbjct: 82 LFHKTVI 88
>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)
Query: 3 LFHNTI 8
L HNTI
Sbjct: 67 LIHNTI 72
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 FHNTIVC 10
+HN + C
Sbjct: 2475 YHNKVYC 2481
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 FHNTIVC 10
+HN + C
Sbjct: 2475 YHNKVYC 2481
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 FHNTIVC 10
+HN + C
Sbjct: 2479 YHNKVYC 2485
48|Sequence|236|245|NTIVCEKPNN
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 IVCEKPNN 10
I+CEKP N
Sbjct: 929 IICEKPTN 936
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 IVCEKPNN 10
I+CE+P N
Sbjct: 928 IICERPTN 935
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 IVCEKPNN 10
IVC +PNN
Sbjct: 290 IVCTRPNN 297
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 IVCEKPNN 10
IVC +PNN
Sbjct: 288 IVCYRPNN 295
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 TIVCEKPNN 10
TI+C++P N
Sbjct: 296 TILCKRPGN 304
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 TIVCEKPNN 10
TI+C +P N
Sbjct: 293 TILCRRPEN 301
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 IVCEKPNN 10
I C +PNN
Sbjct: 287 ITCTRPNN 294
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 1 NTIVCEKPN 9
+T VC PN
Sbjct: 216 DTFVCNHPN 224
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 IVCEKPNN 10
I C +PNN
Sbjct: 294 IDCRRPNN 301
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 IVCEKPNN 10
I C +PNN
Sbjct: 295 ITCMRPNN 302
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 NTIVCEKPNN 10
NT +CE+ N
Sbjct: 2431 NTFICEEVAN 2440
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 NTIVCEKPNN 10
NT +CE+ N
Sbjct: 2431 NTFICEEVAN 2440
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 NTIVCEKPNN 10
NT+V + P N
Sbjct: 1506 NTLVAQSPGN 1515
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 NTIVCEK 7
NTI+C K
Sbjct: 1477 NTILCTK 1483
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 NTIVCEK 7
NTI+C K
Sbjct: 1477 NTILCTK 1483
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 1 NTIVCEKP 8
N ++C KP
Sbjct: 510 NMLLCHKP 517
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 1 NTIVCEKP 8
N ++C KP
Sbjct: 510 NMLLCHKP 517
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 TIVCEKPNN 10
T+ C++P N
Sbjct: 296 TVHCKRPGN 304
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 NTIVC 5
NT+VC
Sbjct: 1264 NTVVC 1268
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 NTIVC 5
NT+VC
Sbjct: 1265 NTVVC 1269
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 TIVCEKPNN 10
T+ C++P N
Sbjct: 302 TMRCKRPGN 310
>sp|E312_ADE02|EARLY E3A 12.5 kDa protein|Human adenovirus C serotype 2
Query: 2 TIVCEKPN 9
T+VC PN
Sbjct: 80 TVVCNCPN 87
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 TIVCEKPNN 10
T+ C++P N
Sbjct: 300 TMHCKRPGN 308
49|Sequence|241|250|EKPNNHLNKF
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 KPNNHLNK 9
+PNNH K
Sbjct: 309 RPNNHTRK 316
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 EKPNNHLN 8
EKP H N
Sbjct: 178 EKPEGHYN 185
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 EKPNNHLN 8
EKP H N
Sbjct: 190 EKPEGHYN 197
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 2 KPNNHL 7
KP NHL
Sbjct: 991 KPTNHL 996
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 EKPNNHLN 8
EKP H N
Sbjct: 190 EKPEGHYN 197
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 EKPNNHLN 8
EKP H N
Sbjct: 187 EKPEGHYN 194
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 EKPNNHLN 8
EKP H N
Sbjct: 188 EKPEGHYN 195
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 EKPNNHLN 8
EKP H N
Sbjct: 173 EKPEGHYN 180
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 EKPNNHLN 8
EKP H N
Sbjct: 188 EKPEGHYN 195
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 EKPNNHLN 8
EKP H N
Sbjct: 187 EKPEGHYN 194
>sp|3BHS_MONPV|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Monkeypox
Query: 3 PNNHLNKF 10
PN H N F
Sbjct: 124 PNKHGNPF 131
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 PNNHLN 8
PN+H N
Sbjct: 35 PNDHAN 40
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 PNNHLN 8
PN+H N
Sbjct: 33 PNDHAN 38
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 KPNNHL 7
KPN+H+
Sbjct: 921 KPNDHV 926
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 PNNHLN 8
PN+H N
Sbjct: 33 PNDHAN 38
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 PNNHLN 8
PN+H N
Sbjct: 33 PNDHAN 38
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 PNNHLN 8
PN+H N
Sbjct: 34 PNDHAN 39
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 PNNHLN 8
PN+H N
Sbjct: 34 PNDHAN 39
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 PNNHLN 8
PN+H N
Sbjct: 34 PNDHAN 39
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 PNNHLN 8
PN+H N
Sbjct: 34 PNDHAN 39
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 PNNHLN 8
PN+H N
Sbjct: 34 PNDHAN 39
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 PNNH 6
PNNH
Sbjct: 1986 PNNH 1989
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 PNNH 6
PNNH
Sbjct: 1986 PNNH 1989
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 PNNH 6
PNNH
Sbjct: 1986 PNNH 1989
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 PNNHLN 8
PN+H N
Sbjct: 34 PNDHAN 39
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 EKPNNHLNKF 10
EK +HLN+F
Sbjct: 1621 EKDLHHLNEF 1630
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 5 NHLNK 9
NHLNK
Sbjct: 447 NHLNK 451
>sp|GLYC_HRSV7|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 KPNNH 6
KPNNH
Sbjct: 158 KPNNH 162
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 5 NHLNK 9
NHLNK
Sbjct: 447 NHLNK 451
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 5 NHLNK 9
NHLNK
Sbjct: 447 NHLNK 451
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 NHLNKF 10
+H+NKF
Sbjct: 177 HHINKF 182
>sp|3BHS_VAR67|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Variola
Query: 3 PNNHLNKF 10
PN H N F
Sbjct: 6 PNKHGNPF 13
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 PNNHLN 8
PN+H N
Sbjct: 36 PNDHAN 41
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 PNNHLN 8
PN+H N
Sbjct: 36 PNDHAN 41
50|Sequence|246|255|HLNKFKGYME
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 HLNKFKGY 8
HLN+ +GY
Sbjct: 1016 HLNRMQGY 1023
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 1 HLNKFKGY 8
H+N F+GY
Sbjct: 218 HVNVFRGY 225
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 LNKFKGYME 10
+N+F GY++
Sbjct: 1003 VNQFTGYLK 1011
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LNKFKGYME 10
+N+F GY++
Sbjct: 1003 VNQFTGYLK 1011
Query: 1 HLNKFKGYME 10
H N+++ Y++
Sbjct: 6389 HANEYRQYLD 6398
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 2 LNKFKGYME 10
LN+FK ++E
Sbjct: 678 LNRFKNHLE 686
>sp|A375_VAR67|PROTEIN A37.5 homolog|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 NKFKGYME 10
NK K YME
Sbjct: 30 NKIKDYME 37
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 LNKFKGYME 10
+N F GY++
Sbjct: 1025 VNSFSGYLK 1033
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LNKFKGYME 10
+N F GY++
Sbjct: 1025 VNSFSGYLK 1033
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 HLNKFKGYME 10
H N ++ Y+E
Sbjct: 6068 HANLYRAYVE 6077
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 1 HLNKFK 6
HL KFK
Sbjct: 328 HLTKFK 333
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 HLNKFKGYME 10
H N GY E
Sbjct: 1032 HYNHIPGYAE 1041
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 HLNKFKGYME 10
H N GY E
Sbjct: 1032 HYNHIPGYAE 1041
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 HLNKFKGY 8
H NK +GY
Sbjct: 1039 HHNKREGY 1046
51|Sequence|251|260|KGYMEHPDQT
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 3 YMEHPDQT 10
Y++HPD+T
Sbjct: 729 YVQHPDKT 736
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 3 YMEHPDQT 10
Y++HPD+T
Sbjct: 729 YVQHPDKT 736
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 KGYMEHPD 8
+ ++EHPD
Sbjct: 4315 RAHIEHPD 4322
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 KGYMEHPD 8
+ ++EHPD
Sbjct: 4315 RAHIEHPD 4322
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate
Query: 4 MEHPDQT 10
M+HPD T
Sbjct: 72 MDHPDPT 78
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 4 MEHPDQT 10
MEH +QT
Sbjct: 164 MEHENQT 170
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 4 MEHPDQT 10
MEH +QT
Sbjct: 164 MEHENQT 170
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 KGYMEHPD 8
+ +EHPD
Sbjct: 4310 RARVEHPD 4317
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 KGYMEHPD 8
+ +EHPD
Sbjct: 4348 RARVEHPD 4355
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 KGYMEHPD 8
+ +EHPD
Sbjct: 4368 RARVEHPD 4375
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 KGYMEHPD 8
+ +EHPD
Sbjct: 4398 RARVEHPD 4405
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 KGYMEHPD 8
+ +EHPD
Sbjct: 4310 RARVEHPD 4317
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 KGYMEHPD 8
+ +EHPD
Sbjct: 4348 RARVEHPD 4355
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 KGYMEHPD 8
+ +EHPD
Sbjct: 4368 RARVEHPD 4375
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 KGYMEHPD 8
+ +EHPD
Sbjct: 4398 RARVEHPD 4405
>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)
Query: 3 YMEHPDQT 10
Y+EHP T
Sbjct: 119 YIEHPYAT 126
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 818 GYELHPDK 825
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 1 KGYMEH 6
+GY EH
Sbjct: 868 RGYFEH 873
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 1 KGYMEH 6
+GY EH
Sbjct: 868 RGYFEH 873
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 819 GYELHPDK 826
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 824 GYELHPDK 831
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 818 GYELHPDK 825
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 830 GYELHPDK 837
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 830 GYELHPDK 837
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 813 GYELHPDK 820
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 818 GYELHPDK 825
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 823 GYELHPDK 830
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 822 GYELHPDK 829
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 818 GYELHPDK 825
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 819 GYELHPDK 826
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 817 GYELHPDK 824
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 815 GYELHPDK 822
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 813 GYELHPDK 820
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 818 GYELHPDK 825
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 830 GYELHPDK 837
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 814 GYELHPDK 821
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 818 GYELHPDK 825
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 817 GYELHPDK 824
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 818 GYELHPDK 825
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 820 GYELHPDK 827
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 815 GYELHPDK 822
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 822 GYELHPDK 829
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 813 GYELHPDK 820
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 813 GYELHPDK 820
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 828 GYELHPDK 835
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 828 GYELHPDK 835
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 819 GYELHPDK 826
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 811 GYELHPDK 818
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 816 GYELHPDK 823
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 815 GYELHPDK 822
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 818 GYELHPDK 825
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 817 GYELHPDK 824
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYMEHPDQ 9
GY HPD+
Sbjct: 819 GYELHPDK 826
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 1 KGYMEH 6
+GY EH
Sbjct: 869 RGYFEH 874
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 1 KGYMEH 6
+GY EH
Sbjct: 869 RGYFEH 874
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 GYMEHPD 8
GY HP+
Sbjct: 806 GYAYHPE 812
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 YMEHPDQ 9
Y++H DQ
Sbjct: 1088 YLDHCDQ 1094
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 YMEHPDQ 9
Y++H DQ
Sbjct: 1088 YLDHCDQ 1094
52|Sequence|256|265|HPDQTRTGFG
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 HPDQTRTG 8
HP Q R G
Sbjct: 171 HPQQERAG 178
>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)
Query: 2 PDQTRTGFG 10
PD+ T FG
Sbjct: 85 PDKNWTSFG 93
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 3 DQTRTGFG 10
D+TR G G
Sbjct: 471 DKTRLGLG 478
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 HPDQTRTGFG 10
HPD G G
Sbjct: 1363 HPDIEEVGLG 1372
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 1 HPDQTRTG 8
HP + RTG
Sbjct: 275 HPVRARTG 282
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 2 PDQTRT 7
PD TRT
Sbjct: 270 PDSTRT 275
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 2 PDQTRT 7
PD TRT
Sbjct: 273 PDSTRT 278
>sp|ORF3_TTVG1|UNCHARACTERIZED ORF3 protein|Torque teno midi virus 1
Query: 1 HPDQTRT 7
H D+TRT
Sbjct: 54 HTDRTRT 60
53|Sequence|261|270|RTGFGCESLL
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 2 TGFGC 6
TGFGC
Sbjct: 233 TGFGC 237
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 2 TGFGC 6
TGFGC
Sbjct: 229 TGFGC 233
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 2 TGFGC 6
TGFGC
Sbjct: 232 TGFGC 236
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 2 TGFGC 6
TGFGC
Sbjct: 203 TGFGC 207
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RTGFGCE 7
R G GCE
Sbjct: 757 RRGVGCE 763
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 1 RTGFGC 6
RTG GC
Sbjct: 225 RTGRGC 230
>sp|VP30_EBOSU|TRANSCRIPTIONAL activator VP30|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 RTGFGCES 8
R GF C+S
Sbjct: 76 RKGFLCDS 83
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TGFGCESLL 10
TG GC+ ++
Sbjct: 53 TGEGCQQIM 61
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 TGFGCESLL 10
TG GC+ ++
Sbjct: 53 TGEGCQQIM 61
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 RTGFGCE 7
RTG G E
Sbjct: 2377 RTGLGAE 2383
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 3 GFGCESLL 10
FGC++ L
Sbjct: 255 AFGCDAAL 262
>sp|M2_I85A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 1 RTGFGC 6
R G+GC
Sbjct: 12 RNGWGC 17
54|Sequence|266|275|CESLLLRGCT
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 ESLLLRGC 9
+SLLL GC
Sbjct: 770 DSLLLNGC 777
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 ESLLLRGC 9
+SLLL GC
Sbjct: 770 DSLLLNGC 777
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 ESLLLRGC 9
+SLLL GC
Sbjct: 770 DSLLLNGC 777
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 ESLLLRGC 9
+SLLL GC
Sbjct: 770 DSLLLNGC 777
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 ESLLLRGC 9
+SLLL GC
Sbjct: 770 DSLLLNGC 777
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 5 LLRGCT 10
L+RGCT
Sbjct: 354 LIRGCT 359
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CESLLLRGC 9
C S+L GC
Sbjct: 1773 CASVLKDGC 1781
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CESLLLRGC 9
C S+L GC
Sbjct: 1773 CASVLKDGC 1781
55|Sequence|271|280|LRGCTIRNTE
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 LRGCTIRNTE 10
+RGC I N E
Sbjct: 1772 IRGCIIYNLE 1781
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 LRGCTIRNTE 10
+RGC I N E
Sbjct: 1772 IRGCIIYNLE 1781
>sp|VP7_ROTHV|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTHT|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTHB|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTH6|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTAM|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTAD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTHX|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTHW|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTHJ|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTHK|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTYO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTHP|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTKU|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTHM|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTH3|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 CTIRN 8
CTIRN
Sbjct: 244 CTIRN 248
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 GCTIRN 8
GC +RN
Sbjct: 2712 GCLVRN 2717
>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 LRGCTIRN 8
L CTI+N
Sbjct: 241 LNTCTIQN 248
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 1 LRGCTIR 7
LRG T+R
Sbjct: 503 LRGVTVR 509
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 1 LRGCT 5
+RGCT
Sbjct: 355 IRGCT 359
56|Sequence|276|285|IRNTEMAVGI
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 IRNTEMAVGI 10
I++TEMA+G+
Sbjct: 47 IKSTEMALGL 56
57|Sequence|281|290|MAVGIVIYAG
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 MAVGIV 6
MAVGIV
Sbjct: 1354 MAVGIV 1359
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 MAVGIV 6
MAVGIV
Sbjct: 1353 MAVGIV 1358
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 AVGIVIY 8
A+G VIY
Sbjct: 2224 AIGCVIY 2230
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 AVGIVIY 8
A+G VIY
Sbjct: 2224 AIGCVIY 2230
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 AVGIVIY 8
A+G VIY
Sbjct: 2224 AIGCVIY 2230
58|Sequence|286|295|VIYAGHETKA
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 IYAGHET 8
IYAGH T
Sbjct: 308 IYAGHIT 314
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 1 VIYAGH 6
V+YAGH
Sbjct: 462 VLYAGH 467
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 YAGHE 7
YAGHE
Sbjct: 1287 YAGHE 1291
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 YAGHE 7
YAGHE
Sbjct: 1288 YAGHE 1292
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 VIYAGHET 8
VIY+G E+
Sbjct: 730 VIYSGRES 737
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 1 VIYAGHET 8
VIY+G E+
Sbjct: 730 VIYSGRES 737
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 1 VIYAGHETKA 10
V Y G ETKA
Sbjct: 119 VRYDGDETKA 128
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 IYAGHET 8
IY+GH T
Sbjct: 308 IYSGHIT 314
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 IYAGHET 8
IY+GH T
Sbjct: 308 IYSGHIT 314
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VIYAGHETK 9
VIY G E K
Sbjct: 800 VIYWGQELK 808
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 IYAGHET 8
IY GH T
Sbjct: 308 IYTGHVT 314
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 IYAGHET 8
IY GH T
Sbjct: 308 IYTGHVT 314
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 YAGHE 7
Y+GHE
Sbjct: 242 YSGHE 246
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 IYAGHET 8
IY GH T
Sbjct: 308 IYTGHVT 314
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 IYAGHETKA 10
+YAG T+A
Sbjct: 1323 VYAGLATRA 1331
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 IYAGHETKA 10
+YAG T+A
Sbjct: 1323 VYAGLATRA 1331
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 IYAGHETKA 10
+YAG T+A
Sbjct: 1323 VYAGLATRA 1331
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 IYAGH 6
+YAGH
Sbjct: 234 LYAGH 238
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 2 IYAGH 6
+YAGH
Sbjct: 266 LYAGH 270
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 IYAGH 6
+YAGH
Sbjct: 266 LYAGH 270
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 IYAGHET 8
IY GH T
Sbjct: 308 IYPGHVT 314
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 IYAGHET 8
IY GH T
Sbjct: 308 IYPGHVT 314
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 IYAGHET 8
IY GH T
Sbjct: 308 IYPGHVT 314
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 IYAGHET 8
IY GH T
Sbjct: 308 IYPGHVT 314
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 IYAGHET 8
IY GH T
Sbjct: 308 IYPGHVT 314
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 IYAGHET 8
IY GH T
Sbjct: 308 IYTGHIT 314
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 IYAGHET 8
IY GH T
Sbjct: 308 IYTGHIT 314
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 IYAGHET 8
IY GH T
Sbjct: 308 IYVGHIT 314
59|Sequence|291|300|HETKAMLNNS
***** No hits found ******
60|Sequence|296|305|MLNNSGPRYK
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 NNSGPRYK 10
N SGPRY+
Sbjct: 2772 NRSGPRYE 2779
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 NNSGPRYK 10
N +GPRY+
Sbjct: 2768 NRNGPRYE 2775
>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LNNSGPR 8
LNN GPR
Sbjct: 106 LNNFGPR 112
>sp|PP71_HCMVA|PROTEIN pp71|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LNNSGPR 8
LNN GPR
Sbjct: 106 LNNFGPR 112
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 5 SGPRYK 10
+GPRY+
Sbjct: 315 AGPRYR 320
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 LNNSGPRY 9
L + GPRY
Sbjct: 1932 LQSRGPRY 1939
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 NNSGPR 8
+NSGPR
Sbjct: 673 HNSGPR 678
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 NNSGPR 8
+NSGPR
Sbjct: 681 HNSGPR 686
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 3 NNSGPR 8
+NSGPR
Sbjct: 681 HNSGPR 686
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 3 NNSGPR 8
+NSGPR
Sbjct: 681 HNSGPR 686
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 3 NNSGPR 8
+NSGPR
Sbjct: 681 HNSGPR 686
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 3 NNSGPR 8
+NSGPR
Sbjct: 681 HNSGPR 686
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 3 NNSGPR 8
+NSGPR
Sbjct: 681 HNSGPR 686
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 NNSGPR 8
+NSGPR
Sbjct: 681 HNSGPR 686
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 3 NNSGPR 8
+NSGPR
Sbjct: 681 HNSGPR 686
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 2 LNNSGPR 8
+NN+ PR
Sbjct: 166 INNASPR 172
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 6 GPRYK 10
GPRY+
Sbjct: 2771 GPRYE 2775
61|Sequence|301|310|GPRYKRSKIE
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 GPRYKRSKIE 10
GP KR+K++
Sbjct: 181 GPPKKRAKVD 190
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 1 GPRYKRSKIE 10
GP KR+K++
Sbjct: 181 GPPKKRAKVD 190
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 1 GPRYKRSK 8
GPR K+SK
Sbjct: 151 GPRKKKSK 158
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 GPRYKRSKI 9
GP YKR +
Sbjct: 774 GPDYKRPGV 782
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 1 GPRYKRSKI 9
GP YKR +
Sbjct: 772 GPDYKRPGV 780
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 1 GPRYKRSK 8
GPR K+SK
Sbjct: 321 GPRKKKSK 328
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 1 GPRYKRSK 8
GPR K+SK
Sbjct: 321 GPRKKKSK 328
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 1 GPRYKRSK 8
GPR K+SK
Sbjct: 320 GPRKKKSK 327
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 3 RYKRSK 8
RYKR+K
Sbjct: 293 RYKRAK 298
>sp|VIE3_HCMVT|30 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 1 GPRYKRSK 8
GPR K+SK
Sbjct: 151 GPRKKKSK 158
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 3 RYKRSK 8
RYKR+K
Sbjct: 312 RYKRAK 317
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 3 RYKRSK 8
RYKR+K
Sbjct: 291 RYKRAK 296
62|Sequence|306|315|RSKIERRMNI
>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996
Query: 2 SKIERRM 8
+K+ERRM
Sbjct: 414 NKLERRM 420
>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996
Query: 2 SKIERRM 8
+K+ERRM
Sbjct: 415 NKLERRM 421
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 SKIERRM 8
+K+ERRM
Sbjct: 414 NKLERRM 420
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 SKIERRM 8
+K+ERRM
Sbjct: 414 NKLERRM 420
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 2 SKIERRM 8
+K+ERRM
Sbjct: 414 NKLERRM 420
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 2 SKIERRMN 9
SKI RR+N
Sbjct: 49 SKILRRLN 56
63|Sequence|311|320|RRMNIDIFFC
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 RRMNIDIF 8
R MN+DIF
Sbjct: 596 RSMNVDIF 603
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 RRMNIDIF 8
+ MN+DIF
Sbjct: 596 KSMNVDIF 603
>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)
Query: 1 RRMNIDIFF 9
R MN+ +FF
Sbjct: 203 RNMNLSVFF 211
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 5 IDIFFC 10
+D+F+C
Sbjct: 643 LDVFYC 648
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 5 IDIFFC 10
+D+F+C
Sbjct: 644 LDVFYC 649
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 4 NIDIFFC 10
NI+I FC
Sbjct: 325 NIEIGFC 331
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 RRMNIDI 7
+R+NIDI
Sbjct: 1324 QRVNIDI 1330
64|Sequence|316|325|DIFFCIGILI
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 IFFCIG 7
+F+CIG
Sbjct: 141 VFYCIG 146
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 3 FFCIGILI 10
FF IG++I
Sbjct: 469 FFTIGLII 476
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 FFCIGILI 10
FF IG++I
Sbjct: 469 FFIIGLII 476
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 FFCIGILI 10
FF IG++I
Sbjct: 469 FFIIGLII 476
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 FFCIGILI 10
FF IG++I
Sbjct: 469 FFIIGLII 476
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 FFCIGILI 10
FF IG++I
Sbjct: 469 FFIIGLII 476
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 FFCIGILI 10
FF IG++I
Sbjct: 469 FFIIGLII 476
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 FFCIGILI 10
FF IG++I
Sbjct: 469 FFIIGLII 476
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 DIFFCI 6
D FFC+
Sbjct: 810 DAFFCL 815
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 DIFFCI 6
D FFC+
Sbjct: 810 DAFFCL 815
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 DIFFCI 6
D FFC+
Sbjct: 810 DAFFCL 815
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 IFFCIGIL 9
I +CIG++
Sbjct: 1302 INYCIGVI 1309
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 DIFFCIGI 8
++ FC+G+
Sbjct: 2148 EVSFCVGL 2155
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 DIFFCIGI 8
++ FC+G+
Sbjct: 2148 EVSFCVGL 2155
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 FFCIGIL 9
F C+G++
Sbjct: 566 FVCLGVI 572
65|Sequence|321|330|IGILILMCLI
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 GILILMCLI 10
G ++LMC++
Sbjct: 872 GAILLMCVL 880
>sp|VEGFH_ORFN2|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ2) (OV
Query: 1 IGILILMCL 9
+GIL+ +CL
Sbjct: 5 VGILVAVCL 13
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GILILMCLI 10
+++LMC++
Sbjct: 872 AVILLMCVV 880
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 IGILILMC 8
+G+++L+C
Sbjct: 1220 VGLIVLVC 1227
>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11
Query: 2 GILILMCL 9
G+L L CL
Sbjct: 44 GVLTLKCL 51
>sp|SPIKE_ADE1A|FIBER protein|Human adenovirus B serotype 11
Query: 2 GILILMCL 9
G+L L CL
Sbjct: 44 GVLTLKCL 51
>sp|SPIKE_ADE07|FIBER protein|Human adenovirus B serotype 7
Query: 2 GILILMCL 9
G+L L CL
Sbjct: 62 GVLTLKCL 69
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GILILMCLI 10
I++LMC +
Sbjct: 872 AIILLMCAV 880
>sp|IR03_HCMVA|UNCHARACTERIZED protein IRL3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IGILILMC 8
IG+L+++C
Sbjct: 86 IGVLVVVC 93
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 2 GILILMCL 9
G+L L CL
Sbjct: 460 GVLALYCL 467
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 2 GILILMCL 9
G+LILM +
Sbjct: 269 GVLILMLI 276
>sp|U91_HHV6Z|PROTEIN U91|Human herpesvirus 6B (strain Z29)
Query: 2 GILILMCLI 10
GI++L C++
Sbjct: 104 GIILLFCIM 112
>sp|US08_HCMVA|UNIQUE short US8 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IGILILMCL 9
+G++I +C+
Sbjct: 181 LGVVIAICM 189
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 GILILMC 8
G+L+++C
Sbjct: 1265 GLLVIIC 1271
66|Sequence|326|335|LMCLIGAVGH
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 2 MCLIGAV 8
+CLIGA+
Sbjct: 92 LCLIGAI 98
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LIGAVGH 10
L+GA+GH
Sbjct: 235 LLGALGH 241
Query: 3 CLIGAVGH 10
C++G GH
Sbjct: 285 CVMGKKGH 292
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 4 LIGAVGH 10
L+GA+GH
Sbjct: 235 LLGALGH 241
Query: 3 CLIGAVGH 10
C++G GH
Sbjct: 285 CVMGKKGH 292
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 CLIGAVGH 10
C+IG VG+
Sbjct: 569 CVIGGVGN 576
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 1 LMCLIGAVGH 10
L CL+ A+G+
Sbjct: 989 LSCLLAALGN 998
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 MCLIGAV 8
MCL+G V
Sbjct: 273 MCLLGNV 279
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 MCLIGAV 8
MCL+G V
Sbjct: 273 MCLLGNV 279
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 2 MCLIGAV 8
MCL+G V
Sbjct: 273 MCLLGNV 279
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 3 CLIGAVGH 10
C+IG VG+
Sbjct: 569 CVIGGVGN 576
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 4 LIGAVGH 10
L+GA GH
Sbjct: 487 LVGACGH 493
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CLIGAVGH 10
CL+ A GH
Sbjct: 276 CLLVAYGH 283
>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain
Query: 1 LMCLIG 6
LMC++G
Sbjct: 39 LMCIVG 44
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 MCLIG 6
MCL+G
Sbjct: 683 MCLVG 687
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 MCLIG 6
MCL+G
Sbjct: 683 MCLVG 687
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 MCLIG 6
MCL+G
Sbjct: 683 MCLVG 687
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LMCLIG 6
L CLIG
Sbjct: 2365 LFCLIG 2370
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LMCLIG 6
L CLIG
Sbjct: 2385 LFCLIG 2390
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LMCLIG 6
L CLIG
Sbjct: 2415 LFCLIG 2420
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 LMCLIG 6
L CLIG
Sbjct: 2415 LFCLIG 2420
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 LMCLIG 6
L CLIG
Sbjct: 2385 LFCLIG 2390
>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LMCLIG 6
LMC++G
Sbjct: 41 LMCIVG 46
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 LMCLIG 6
L CLIG
Sbjct: 2365 LFCLIG 2370
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 3 CLIGAV 8
CL+G+V
Sbjct: 276 CLVGSV 281
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 LIGAVGH 10
+IG +GH
Sbjct: 172 IIGHIGH 178
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 LIGAVGH 10
+IG +GH
Sbjct: 172 IIGHIGH 178
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LIGAVGH 10
+IG +GH
Sbjct: 172 IIGHIGH 178
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 4 LIGAVGH 10
+IG +GH
Sbjct: 172 IIGHIGH 178
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 4 LIGAVGH 10
+IG +GH
Sbjct: 172 IIGHIGH 178
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 2 MCLIGAVG 9
+ L+GAVG
Sbjct: 16 LALLGAVG 23
>sp|Y97_ADE07|UNCHARACTERIZED 9.7 kDa early protein|Human adenovirus B serotype 7
Query: 5 IGAVGH 10
+GAVGH
Sbjct: 85 VGAVGH 90
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 LMCLIGAVGH 10
L L+GA+G+
Sbjct: 1386 LCALVGALGN 1395
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LMCLIGAVGH 10
++C + +GH
Sbjct: 409 MLCCLLTIGH 418
67|Sequence|331|340|GAVGHSIWNG
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 AVGHSIWNG 10
A GH++W G
Sbjct: 280 AYGHALWEG 288
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GHSIWNG 10
GH++W G
Sbjct: 288 GHALWEG 294
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 GAVGHSIWN 9
G+VGH ++N
Sbjct: 117 GSVGHPLFN 125
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 GAVGHSIWN 9
G+VGH ++N
Sbjct: 117 GSVGHPLFN 125
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 GAVGHSIWN 9
G+VGH ++N
Sbjct: 117 GSVGHPLFN 125
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 GAVGHSIWN 9
G+VGH ++N
Sbjct: 146 GSVGHPLFN 154
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 GAVGHSIWN 9
G+VGH ++N
Sbjct: 117 GSVGHPLFN 125
>sp|VE6_HPV43|PROTEIN E6|Human papillomavirus 43
Query: 5 HSIWNG 10
HS+W G
Sbjct: 130 HSVWKG 135
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 5 HSIWNG 10
H++WNG
Sbjct: 1015 HTLWNG 1020
>sp|VE2_HPV1|REGULATORY protein E2|Human papillomavirus type 1 (Human
Query: 5 HSIWN 9
H+IWN
Sbjct: 131 HTIWN 135
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 5 HSIWN 9
HS+WN
Sbjct: 417 HSMWN 421
>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus
Query: 5 HSIWN 9
H IWN
Sbjct: 20 HDIWN 24
>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate
Query: 5 HSIWN 9
H IWN
Sbjct: 20 HDIWN 24
>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)
Query: 5 HSIWN 9
H IWN
Sbjct: 20 HDIWN 24
>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)
Query: 5 HSIWN 9
H IWN
Sbjct: 20 HDIWN 24
>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)
Query: 5 HSIWN 9
H IWN
Sbjct: 20 HDIWN 24
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 AVGHSIWNG 10
A+ HS +NG
Sbjct: 78 ALHHSTYNG 86
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 AVGHSIWNG 10
A+ HS +NG
Sbjct: 78 ALHHSTYNG 86
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 5 HSIWNG 10
H IW G
Sbjct: 1405 HRIWRG 1410
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 5 HSIWNG 10
H IW G
Sbjct: 1404 HRIWRG 1409
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 5 HSIWNG 10
H IW G
Sbjct: 1403 HRIWRG 1408
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 5 HSIWNG 10
H IW G
Sbjct: 1424 HRIWRG 1429
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 1 GAVGHSI 7
GA+GH +
Sbjct: 237 GALGHEV 243
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GAVGHSI 7
GA+GH +
Sbjct: 237 GALGHEV 243
>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GHSIWN 9
G+S WN
Sbjct: 209 GNSTWN 214
>sp|Y7K_MEASH|PUTATIVE uncharacterized 7 kDa protein|Measles virus (strain Halle) (MeV)
Query: 5 HSIWNG 10
HS+W+G
Sbjct: 23 HSLWDG 28
>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 HSIWNG 10
H++W G
Sbjct: 250 HAVWAG 255
68|Sequence|336|345|SIWNGTFEEH
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 SIWNGTF 7
++WNGTF
Sbjct: 2058 NVWNGTF 2064
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 SIWNGTF 7
+IW+GTF
Sbjct: 2056 NIWHGTF 2062
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 SIWNGTF 7
+IW GTF
Sbjct: 2058 NIWQGTF 2064
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SIWNGTF 7
S W+GTF
Sbjct: 2054 STWHGTF 2060
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 2 IWNGT 6
IWNGT
Sbjct: 656 IWNGT 660
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 2 IWNGTFEEH 10
IWNGT++++
Sbjct: 388 IWNGTWDKN 396
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SIWNGTFEE 9
S+W TF+E
Sbjct: 361 SLWGFTFQE 369
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SIWNGTFEE 9
S+W TF+E
Sbjct: 361 SLWGFTFQE 369
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SIWNGTFEE 9
S+W TF+E
Sbjct: 361 SLWGFTFQE 369
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 2 IWNGT 6
IWNGT
Sbjct: 656 IWNGT 660
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 2 IWNGT 6
IWNGT
Sbjct: 656 IWNGT 660
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 2 IWNGT 6
IWNGT
Sbjct: 656 IWNGT 660
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 2 IWNGT 6
IWNGT
Sbjct: 656 IWNGT 660
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 SIWNGTF 7
++W+GTF
Sbjct: 2054 NMWSGTF 2060
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 IWNGT 6
IWNGT
Sbjct: 656 IWNGT 660
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SIWNGTF 7
++W+GTF
Sbjct: 2054 NMWSGTF 2060
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 SIWNGTF 7
++W+GTF
Sbjct: 2054 NMWSGTF 2060
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 SIWNGTF 7
++W+GTF
Sbjct: 2062 NMWHGTF 2068
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 SIWNGTF 7
++W+GTF
Sbjct: 2060 NMWHGTF 2066
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 2 IWNGT 6
IWNGT
Sbjct: 656 IWNGT 660
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 2 IWNGT 6
IWNGT
Sbjct: 656 IWNGT 660
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 SIWNGTF 7
++W GTF
Sbjct: 2058 NLWQGTF 2064
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 2 IWNGT 6
IWNGT
Sbjct: 656 IWNGT 660
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 SIWNGTFEEH 10
S+W E+H
Sbjct: 2567 SVWEDLLEDH 2576
Query: 3 WNGTF 7
W GTF
Sbjct: 2060 WQGTF 2064
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 SIWNGTF 7
++W GTF
Sbjct: 2058 NMWQGTF 2064
>sp|UL120_HCMVA|UNCHARACTERIZED protein UL120|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 IWNGTFEEH 10
IW+ TF H
Sbjct: 191 IWSWTFRRH 199
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 SIWNGTFEEH 10
S WN T + H
Sbjct: 336 SNWNSTLDLH 345
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 NGTFEEH 10
NG F++H
Sbjct: 6265 NGQFQDH 6271
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 WNGTF 7
W+GTF
Sbjct: 2057 WHGTF 2061
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WNGTF 7
W+GTF
Sbjct: 2056 WHGTF 2060
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WNGTF 7
W+GTF
Sbjct: 2056 WHGTF 2060
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WNGTF 7
W+GTF
Sbjct: 2056 WHGTF 2060
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 WNGTF 7
W+GTF
Sbjct: 2061 WHGTF 2065
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 NGTFEE 9
+GTFEE
Sbjct: 3156 DGTFEE 3161
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 NGTFEE 9
+GTFEE
Sbjct: 3156 DGTFEE 3161
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WNGTF 7
W+GTF
Sbjct: 2056 WHGTF 2060
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 WNGTF 7
W+GTF
Sbjct: 2061 WHGTF 2065
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WNGTF 7
W+GTF
Sbjct: 2056 WHGTF 2060
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WNGTF 7
W+GTF
Sbjct: 2056 WHGTF 2060
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 3 WNGTFE 8
W G+FE
Sbjct: 1828 WGGSFE 1833
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 WNGTF 7
W+GTF
Sbjct: 2060 WHGTF 2064
>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SIWNGT 6
S+W GT
Sbjct: 243 SVWTGT 248
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SIWNGT 6
S+W GT
Sbjct: 243 SVWTGT 248
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 3 WNGTFE 8
W G+FE
Sbjct: 1828 WGGSFE 1833
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 WNGTF 7
W+GTF
Sbjct: 2061 WHGTF 2065
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 WNGTF 7
W+GTF
Sbjct: 2056 WHGTF 2060
>sp|GP42_EBVG|GLYCOPROTEIN 42|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 WNGTFE 8
WNG F+
Sbjct: 125 WNGCFQ 130
>sp|GP42_EBVB9|GLYCOPROTEIN 42|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 WNGTFE 8
WNG F+
Sbjct: 125 WNGCFQ 130
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 3 WNGTFE 8
WNG F+
Sbjct: 410 WNGVFD 415
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 WNGTF 7
W GTF
Sbjct: 2057 WQGTF 2061
>sp|GP42_EBVA8|GLYCOPROTEIN 42|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 WNGTFE 8
WNG F+
Sbjct: 125 WNGCFQ 130
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 WNGTF 7
W GTF
Sbjct: 2060 WQGTF 2064
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 5 GTFEEH 10
GTF EH
Sbjct: 2043 GTFYEH 2048
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIWNGT 6
S WNGT
Sbjct: 387 STWNGT 392
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 WNGTF 7
W GTF
Sbjct: 2060 WQGTF 2064
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SIWNGT 6
S WNGT
Sbjct: 391 STWNGT 396
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 IWNGTFE 8
IWNG +
Sbjct: 723 IWNGVIK 729
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 IWNGTFE 8
IWNG +
Sbjct: 723 IWNGVIK 729
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 SIWNGTF 7
S W G+F
Sbjct: 761 SYWTGSF 767
>sp|UL120_HCMVM|MEMBRANE protein UL120|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 IWNGTFEEH 10
IW+ TF H
Sbjct: 191 IWSWTFRRH 199
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 SIWNGT 6
S+WN T
Sbjct: 2489 SVWNAT 2494
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 SIWNGT 6
S+WN T
Sbjct: 2489 SVWNAT 2494
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 SIWNGT 6
S+WN T
Sbjct: 2486 SVWNAT 2491
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 SIWNG 5
S WNG
Sbjct: 1820 SFWNG 1824
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 SIWNG 5
S WNG
Sbjct: 1817 SFWNG 1821
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 1 SIWNGTFEEH 10
+I N T E H
Sbjct: 294 AILNNTIENH 303
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 WNGTF 7
W GTF
Sbjct: 729 WTGTF 733
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 2 IWNG 5
IWNG
Sbjct: 239 IWNG 242
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 IWNG 5
IWNG
Sbjct: 239 IWNG 242
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 2 IWNG 5
IWNG
Sbjct: 239 IWNG 242
>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 5 GTFEE 9
GTFEE
Sbjct: 213 GTFEE 217
>sp|U24A_HHV6Z|UNCHARACTERIZED protein U24A|Human herpesvirus 6B (strain Z29)
Query: 2 IWNGTF 7
+W GT+
Sbjct: 18 LWEGTY 23
69|Sequence|341|350|TFEEHPPFDV
>sp|W_NIPAV|PROTEIN W|Nipah virus
Query: 2 FEEHPP 7
FE+HPP
Sbjct: 432 FEDHPP 437
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 2 FEEHPPFDV 10
+E PPF++
Sbjct: 162 YERQPPFEI 170
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 2 FEEHPPF 8
FE+HP F
Sbjct: 213 FEKHPHF 219
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 2 FEEHPPF 8
FE+HP F
Sbjct: 213 FEKHPHF 219
>sp|VU84_HHV6U|PROTEIN U84|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FEEHPPFDV 10
F +H P+D+
Sbjct: 69 FPQHTPYDI 77
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 1 TFEEHPP 7
TF EHPP
Sbjct: 211 TFREHPP 217
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 1 TFEEHPPFD 9
TFE PFD
Sbjct: 303 TFETWDPFD 311
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 1 TFEEHPP 7
TF+E PP
Sbjct: 299 TFDEFPP 305
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 TFEEHPP 7
TF+E PP
Sbjct: 298 TFDEFPP 304
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 2 FEEHP 6
FE+HP
Sbjct: 78 FEDHP 82
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 TFEEHP 6
T+E HP
Sbjct: 2489 TYERHP 2494
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 6 PPFDV 10
PPFD+
Sbjct: 468 PPFDI 472
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 2 FEEHP 6
FE+HP
Sbjct: 78 FEDHP 82
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 6 PPFDV 10
PPFDV
Sbjct: 233 PPFDV 237
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 TFEEHP 6
T+E HP
Sbjct: 2489 TYERHP 2494
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 EHPPFDV 10
++PP DV
Sbjct: 269 DYPPLDV 275
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 EHPPFDV 10
++PP DV
Sbjct: 269 DYPPLDV 275
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 EHPPFDV 10
++PP DV
Sbjct: 269 DYPPLDV 275
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 2 FEEHP 6
FE+HP
Sbjct: 213 FEKHP 217
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 2 FEEHP 6
FE+HP
Sbjct: 213 FEKHP 217
>sp|UXP_ADE02|U exon protein|Human adenovirus C serotype 2
Query: 3 EEHPPFDV 10
+EH FD+
Sbjct: 9 QEHEEFDI 16
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 4 EHPPFDV 10
E PPF +
Sbjct: 432 EEPPFSI 438
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 EHPPFDV 10
E PPF +
Sbjct: 432 EEPPFSI 438
>sp|VE7_HPV1|PROTEIN E7|Human papillomavirus type 1 (Human
Query: 2 FEEHPPFDV 10
+EE PP D+
Sbjct: 27 YEEVPPDDI 35
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 EHPPFDV 10
E PPF +
Sbjct: 432 EEPPFSI 438
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 FEEHPPFD 9
E HP FD
Sbjct: 541 LELHPAFD 548
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 3 EEHPPFDV 10
E HP FD+
Sbjct: 532 ERHPFFDL 539
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 EEHPPFDV 10
E HP FD+
Sbjct: 532 ERHPFFDL 539
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 FEEHPPFD 9
E HP FD
Sbjct: 541 LELHPAFD 548
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 TFEEHP 6
TFE HP
Sbjct: 1718 TFETHP 1723
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 5 HPPFDV 10
HP FDV
Sbjct: 49 HPYFDV 54
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 1 TFEEHP 6
TF+ HP
Sbjct: 1118 TFKSHP 1123
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 TFEEHP 6
TFE HP
Sbjct: 1688 TFETHP 1693
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 5 HPPFDV 10
HP FDV
Sbjct: 48 HPYFDV 53
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 EHPPFD 9
+HPP D
Sbjct: 1151 DHPPSD 1156
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 TFEEHPPFDV 10
+F E PP V
Sbjct: 1015 SFHEIPPIQV 1024
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 EHPPFDV 10
E PPF +
Sbjct: 433 EDPPFSI 439
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 5 HPPFDV 10
HP FDV
Sbjct: 48 HPYFDV 53
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 EHPP 7
EHPP
Sbjct: 317 EHPP 320
70|Sequence|346|355|PPFDVPDANG
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 99 PYDVPD 104
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 99 PYDVPD 104
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 116 PYDVPD 121
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 115 PYDVPD 120
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 99 PYDVPD 104
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 99 PYDVPD 104
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 99 PYDVPD 104
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 3 FDVPDA 8
FDVPD
Sbjct: 269 FDVPDG 274
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 99 PYDVPD 104
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 2 PFDVPD 7
P+DVPD
Sbjct: 99 PYDVPD 104
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 2 PFDVPD 7
P+DVP+
Sbjct: 114 PYDVPN 119
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PFDVPDAN 9
PF +PDA+
Sbjct: 755 PFRLPDAD 762
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 PPFDVP 6
PP D+P
Sbjct: 363 PPMDIP 368
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 PPFDVP 6
PP D+P
Sbjct: 372 PPIDIP 377
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 PPFDVP 6
PP D+P
Sbjct: 373 PPIDIP 378
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 PPFDVP 6
PP D+P
Sbjct: 372 PPIDIP 377
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 PPFDVP 6
PP D+P
Sbjct: 372 PPIDIP 377
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 PPFDVP 6
PP D+P
Sbjct: 373 PPIDIP 378
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 PPFDVP 6
PP D+P
Sbjct: 372 PPIDIP 377
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 FDVPD 7
FD+PD
Sbjct: 225 FDIPD 229
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 FDVPD 7
FD+PD
Sbjct: 443 FDIPD 447
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 FDVPDA 8
FD+PDA
Sbjct: 1092 FDIPDA 1097
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 FDVPDA 8
FD+PDA
Sbjct: 1092 FDIPDA 1097
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 3 FDVPDANG 10
F++ DANG
Sbjct: 389 FEIRDANG 396
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 FDVPDA 8
FD+PDA
Sbjct: 1092 FDIPDA 1097
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 FDVPDA 8
FD+PDA
Sbjct: 1093 FDIPDA 1098
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 3 FDVPDANG 10
F++ DANG
Sbjct: 389 FEIRDANG 396
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 FDVPDA 8
FD+PDA
Sbjct: 1092 FDIPDA 1097
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 FDVPDA 8
FD+PDA
Sbjct: 1093 FDIPDA 1098
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 PPFDVP 6
PP D+P
Sbjct: 363 PPLDIP 368
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 1 PPFDVPDANG 10
P FDV NG
Sbjct: 49 PYFDVRSVNG 58
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 1 PPFDVP 6
P FD+P
Sbjct: 154 PRFDIP 159
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PPFDVP 6
P FD+P
Sbjct: 154 PRFDIP 159
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PPFDVP 6
P FD+P
Sbjct: 154 PRFDIP 159
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PPFDVP 6
P FD+P
Sbjct: 154 PRFDIP 159
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 1 PPFDVP 6
P FD+P
Sbjct: 154 PRFDIP 159
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 3 FDVPDANG 10
F++ DANG
Sbjct: 390 FEIRDANG 397
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 3 FDVPDANG 10
F++ DANG
Sbjct: 389 FEIRDANG 396
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 2 PFDVPDAN 9
PF +PD N
Sbjct: 813 PFILPDDN 820
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 3 FDVPDANG 10
FD+P A G
Sbjct: 186 FDIPQAGG 193
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 3 FDVPDANG 10
F++ DANG
Sbjct: 389 FEIRDANG 396
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 3 FDVPDANG 10
F++ DANG
Sbjct: 389 FEIRDANG 396
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 3 FDVPDANG 10
F++ DANG
Sbjct: 389 FEIRDANG 396
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 3 FDVPDANG 10
F++ DANG
Sbjct: 390 FEIRDANG 397
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 DVPDANG 10
++P ANG
Sbjct: 145 NIPSANG 151
>sp|REV_HV2D1|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 PPFDVPDAN 9
PP D+P++N
Sbjct: 87 PPTDLPESN 95
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PPFDVP 6
PP DVP
Sbjct: 2777 PPGDVP 2782
>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United
Query: 4 DVPDAN 9
D+PD N
Sbjct: 193 DIPDRN 198
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PPFDVPDAN 9
PP+ PD N
Sbjct: 2286 PPWARPDYN 2294
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PPFDVPDAN 9
PP+ PD N
Sbjct: 2286 PPWARPDYN 2294
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 PPFDVPDA 8
PP D P A
Sbjct: 2779 PPGDAPQA 2786
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 PPFDVPDAN 9
PP+ PD N
Sbjct: 2290 PPWARPDYN 2298
>sp|REV_HV2BE|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 PPFDVPDAN 9
PP D+P++N
Sbjct: 87 PPTDLPESN 95
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 1 PPFDVPDA 8
PP D+P A
Sbjct: 166 PPIDIPQA 173
71|Sequence|351|360|PDANGSFLPS
>sp|VGF_MONPV|PRO-VIRAL epidermal growth factor|Monkeypox virus (MPXV)
Query: 1 PDANGSFLPS 10
PD S++PS
Sbjct: 94 PDTTTSYIPS 103
>sp|U18_HHV6Z|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 PDANGSF 7
PDANG+
Sbjct: 165 PDANGTL 171
>sp|U18_HHV6H|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 1 PDANGSF 7
PDANG+
Sbjct: 165 PDANGTL 171
>sp|US33_HCMVA|UNCHARACTERIZED protein HHLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PDANGSFLP 9
P+A+G+F P
Sbjct: 113 PEAHGAFAP 121
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 1 PDANGSFLP 9
PDA S LP
Sbjct: 398 PDAYESLLP 406
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PDANGSFLP 9
PDA S LP
Sbjct: 682 PDAYESLLP 690
>sp|DUT_HHV6G|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 2 DANGSFL 8
DAN SFL
Sbjct: 361 DANSSFL 367
>sp|DUT_HHV6U|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 2 DANGSFL 8
DAN SFL
Sbjct: 361 DANSSFL 367
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 5 GSFLPS 10
GS+LPS
Sbjct: 300 GSYLPS 305
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 1 PDANGSFLP 9
P ANG+++P
Sbjct: 107 PLANGNYIP 115
>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DANGSFLPS 10
D N S LPS
Sbjct: 504 DKNPSILPS 512
>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)
Query: 2 DANGSFLPS 10
D N S LPS
Sbjct: 504 DKNPSILPS 512
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 2 DANGSFLPS 10
DA+G+FL +
Sbjct: 604 DADGNFLTT 612
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 NGSFLPS 10
NG FLP+
Sbjct: 328 NGGFLPT 334
>sp|GI_CHV1|ENVELOPE glycoprotein I|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 3 ANGSFL 8
ANGSFL
Sbjct: 42 ANGSFL 47
>sp|PG068_VARV|PROTEIN OPG068|Variola virus
Query: 2 DANGSFLPS 10
D N S LPS
Sbjct: 504 DKNPSVLPS 512
>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 DANGSFLPS 10
D N S LPS
Sbjct: 504 DKNPSVLPS 512
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 PDANGSFLPS 10
PD N LPS
Sbjct: 2299 PDYNPPLLPS 2308
>sp|B8_HHV6Z|PROTEIN B8|Human herpesvirus 6B (strain Z29)
Query: 5 GSFLP 9
GSFLP
Sbjct: 27 GSFLP 31
Query: 5 GSFLP 9
GSFLP
Sbjct: 62 GSFLP 66
Query: 5 GSFLP 9
GSFLP
Sbjct: 97 GSFLP 101
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 1 PDANGSFLPS 10
PD + S++P+
Sbjct: 296 PDTHISYMPT 305
72|Sequence|356|365|SFLPSALGGF
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 SFLPSALGGF 10
SFL S+ GGF
Sbjct: 1023 SFLESSKGGF 1032
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 SFLPSALGGF 10
+ LPS LGG
Sbjct: 931 ALLPSQLGGL 940
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 SFLPSALGGF 10
+ LPS LGG
Sbjct: 931 ALLPSQLGGL 940
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 1 SFLPSALGGF 10
S LP LGGF
Sbjct: 133 SALPGHLGGF 142
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 FLPSALGGF 10
LPS LGG
Sbjct: 936 LLPSQLGGL 944
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 FLPSALGGF 10
LPS LGG
Sbjct: 938 LLPSQLGGL 946
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 FLPSALGGF 10
LPS LGG
Sbjct: 938 LLPSQLGGL 946
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 FLPSALGGF 10
LPS LGG
Sbjct: 938 LLPSQLGGL 946
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 FLPSALGG 9
F+P ++GG
Sbjct: 1020 FMPRSIGG 1027
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 FLPSALGG 9
F+P ++GG
Sbjct: 1020 FMPRSIGG 1027
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 FLPSALGG 9
F+P ++GG
Sbjct: 1020 FMPRSIGG 1027
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 FLPSALGG 9
F+P ++GG
Sbjct: 1020 FMPRSIGG 1027
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 FLPSALGG 9
F+P ++GG
Sbjct: 1020 FMPRSIGG 1027
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 FLPSALGG 9
F+P ++GG
Sbjct: 1020 FMPRSIGG 1027
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 FLPSALGG 9
F+P ++GG
Sbjct: 1020 FMPRSIGG 1027
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 FLPSALGG 9
F+P ++GG
Sbjct: 1020 FMPRSIGG 1027
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 FLPSALGG 9
F+P ++GG
Sbjct: 1020 FMPRSIGG 1027
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 2 FLPSALGG 9
F+P ++GG
Sbjct: 1020 FMPRSIGG 1027
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 FLPSALGG 9
F+P +GG
Sbjct: 1005 FMPKGIGG 1012
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 SFLPSALG 8
+FLP A+G
Sbjct: 3610 AFLPFAMG 3617
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SFLPSALG 8
+FLP A+G
Sbjct: 3610 AFLPFAMG 3617
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 3 LPSALGGF 10
+PS + GF
Sbjct: 968 MPSGMAGF 975
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 3 LPSALGGF 10
+PS + GF
Sbjct: 968 MPSGMAGF 975
>sp|PHOSP_RABVI|PHOSPHOPROTEIN virus (strain India) (RABV)
Query: 4 PSALGG 9
PS LGG
Sbjct: 63 PSGLGG 68
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 4 PSALGG 9
P+ALGG
Sbjct: 664 PAALGG 669
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 4 PSALGG 9
P+ALGG
Sbjct: 664 PAALGG 669
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 2 FLPSALGGF 10
+P+A+GG+
Sbjct: 65 LVPNAVGGY 73
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 FLPSALGGF 10
+P+A+GG+
Sbjct: 197 LVPNAVGGY 205
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 FLPSALGGF 10
+P+A+GG+
Sbjct: 197 LVPNAVGGY 205
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 2 FLPSALGGF 10
+P+A+GG+
Sbjct: 197 LVPNAVGGY 205
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 FLPSALGGF 10
+P+A+GG+
Sbjct: 197 LVPNAVGGY 205
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 FLPSALGGF 10
+P+A+GG+
Sbjct: 197 LVPNAVGGY 205
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 FLPSALGGF 10
+P+A+GG+
Sbjct: 197 LVPNAVGGY 205
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 FLPSALGGF 10
+P+A+GG+
Sbjct: 197 LVPNAVGGY 205
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 1 SFLPSA 6
SF+PSA
Sbjct: 155 SFIPSA 160
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 2 FLPSALGGF 10
+P+A+GG+
Sbjct: 195 LVPNAVGGY 203
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 1 SFLPSA 6
SF+PSA
Sbjct: 155 SFIPSA 160
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 FLPSALGGF 10
+P+A+GG+
Sbjct: 197 LVPNAVGGY 205
73|Sequence|361|370|ALGGFYMFLT
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 ALGGFYMFLT 10
ALGG +FL+
Sbjct: 776 ALGGVMIFLS 785
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 ALGGFYMFLT 10
ALGG +FL+
Sbjct: 780 ALGGVLIFLS 789
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 ALGGFYMFLT 10
ALGG +FL+
Sbjct: 780 ALGGVLIFLS 789
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 GGFYMFL 9
GGFY F+
Sbjct: 570 GGFYRFM 576
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 1 ALGGFYMFLT 10
ALGG Y +T
Sbjct: 460 ALGGLYTAVT 469
Query: 1 ALGGFYMFL 9
A GG Y FL
Sbjct: 259 AGGGLYAFL 267
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 5 FYMFLT 10
FY+FLT
Sbjct: 2223 FYIFLT 2228
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 GGFYMFL 9
GGFY F+
Sbjct: 570 GGFYRFM 576
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 ALGGFYMFLT 10
A+GG +FL+
Sbjct: 777 AVGGVLLFLS 786
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 ALGGFYMFLT 10
A+GG +FL+
Sbjct: 773 AVGGVLLFLS 782
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 ALGGFYMFLT 10
A+GG +FL+
Sbjct: 777 AVGGVLLFLS 786
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 LGGFYMF 8
+ GFY+F
Sbjct: 1801 MSGFYIF 1807
>sp|EV45_HHV1M|ENVELOPE protein UL45|Human herpesvirus 1 (strain MP)
Query: 3 GGFYMFLT 10
GGF F+T
Sbjct: 156 GGFVQFVT 163
>sp|EV45_HHV1K|ENVELOPE protein UL45|Human herpesvirus 1 (strain KOS)
Query: 3 GGFYMFLT 10
GGF F+T
Sbjct: 156 GGFVQFVT 163
>sp|EV45_HHV11|ENVELOPE protein UL45|Human herpesvirus 1 (strain 17)
Query: 3 GGFYMFLT 10
GGF F+T
Sbjct: 156 GGFVQFVT 163
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 LGGFYM 7
+GGFY+
Sbjct: 298 IGGFYI 303
>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus
Query: 4 GFYMFL 9
G+Y+FL
Sbjct: 74 GYYIFL 79
>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate
Query: 4 GFYMFL 9
G+Y+FL
Sbjct: 74 GYYIFL 79
>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 4 GFYMFL 9
G+Y+FL
Sbjct: 74 GYYIFL 79
>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)
Query: 4 GFYMFL 9
G+Y+FL
Sbjct: 74 GYYIFL 79
>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 4 GFYMFL 9
G+Y+FL
Sbjct: 74 GYYIFL 79
>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain
Query: 1 ALGGFYMFL 9
+GGF++ L
Sbjct: 264 GMGGFFLTL 272
>sp|EV45_HHV23|ENVELOPE protein UL45|Human herpesvirus 2 (strain 333)
Query: 3 GGFYMFLT 10
GGF F+T
Sbjct: 156 GGFVRFVT 163
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ALGGFYMFL 9
A+GG +FL
Sbjct: 760 AVGGITLFL 768
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ALGGFYMFL 9
A+GG +FL
Sbjct: 760 AVGGITLFL 768
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ALGGFYMFL 9
A+GG +FL
Sbjct: 760 AVGGITLFL 768
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ALGGFYMFL 9
A+GG +FL
Sbjct: 760 AVGGITLFL 768
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ALGGFYMFL 9
A+GG +FL
Sbjct: 760 AVGGITLFL 768
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 3 GGFYMF 8
G FY+F
Sbjct: 187 GSFYLF 192
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 3 GGFYMF 8
G FY+F
Sbjct: 187 GSFYLF 192
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 3 GGFYMF 8
G FY+F
Sbjct: 187 GSFYLF 192
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GGFYMFL 9
GG ++FL
Sbjct: 2159 GGIFLFL 2165
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GGFYMFL 9
GG ++FL
Sbjct: 2156 GGIFLFL 2162
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GGFYMFL 9
GG ++FL
Sbjct: 2159 GGIFLFL 2165
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GGFYMFL 9
GG ++FL
Sbjct: 2159 GGIFLFL 2165
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 GGFYMFL 9
GG ++FL
Sbjct: 2159 GGIFLFL 2165
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GGFYMFL 9
GG ++FL
Sbjct: 2159 GGIFLFL 2165
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 FYMFLT 10
FY++LT
Sbjct: 3085 FYLYLT 3090
>sp|EV45_HHV2H|ENVELOPE protein UL45|Human herpesvirus 2 (strain HG52)
Query: 3 GGFYMFLT 10
GGF F+T
Sbjct: 156 GGFVRFVT 163
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 2 LGGFYMFL 9
LG FY F+
Sbjct: 163 LGNFYCFV 170
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 ALGGFYMFL 9
A+GG +FL
Sbjct: 775 AVGGILIFL 783
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 FYMFLT 10
FY++LT
Sbjct: 3085 FYLYLT 3090
>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LGGFY 6
+GGFY
Sbjct: 452 IGGFY 456
>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LGGFY 6
+GGFY
Sbjct: 448 IGGFY 452
>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)
Query: 2 LGGFY 6
+GGFY
Sbjct: 452 IGGFY 456
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 ALGGFYMFL 9
A+GG +FL
Sbjct: 774 AVGGILVFL 782
74|Sequence|366|375|YMFLTMIILL
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 YMFLTMI 7
YM LT+I
Sbjct: 458 YMLLTLI 464
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 MFLTMIILL 10
+FL MI+L+
Sbjct: 2228 VFLLMIVLI 2236
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 2 MFLTMIILL 10
M+L M+++L
Sbjct: 1 MYLFMVVIL 9
75|Sequence|371|380|MIILLQVLIP
>sp|VE2_HPV15|REGULATORY protein E2|Human papillomavirus 15
Query: 1 MIILLQVL 8
M+ILLQ L
Sbjct: 1 MVILLQSL 8
>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 MIILLQVLIP 10
+IIL+ L+P
Sbjct: 19 VIILIGTLVP 28
76|Sequence|376|385|QVLIPISLYV
>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)
Query: 1 QVLIPISLY 9
+V++PIS+Y
Sbjct: 331 KVVLPISIY 339
>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)
Query: 1 QVLIPISLY 9
+V++PIS+Y
Sbjct: 331 KVVLPISIY 339
>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)
Query: 1 QVLIPISLY 9
+V++PIS+Y
Sbjct: 331 KVVLPISIY 339
>sp|NCAP_INBAA|NUCLEOPROTEIN B virus (strain B/Ann
Query: 1 QVLIPISLY 9
+V++PIS+Y
Sbjct: 331 KVVLPISIY 339
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 3 LIPISLYV 10
+P+SLYV
Sbjct: 4 FVPLSLYV 11
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 5 PISLYV 10
PISLY+
Sbjct: 161 PISLYI 166
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 4 IPISLYV 10
+P+S+Y+
Sbjct: 271 VPVSMYI 277
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 VLIPISL 8
VLIP+S+
Sbjct: 1479 VLIPVSM 1485
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 1 QVLIPISLYV 10
Q P+SLY+
Sbjct: 226 QTYTPMSLYL 235
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 IPISLY 9
IPI+LY
Sbjct: 493 IPIALY 498
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 IPISLY 9
IPI+LY
Sbjct: 493 IPIALY 498
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 1 QVLIPISLYV 10
Q P+SLY+
Sbjct: 227 QTFSPMSLYL 236
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 VLIPISL 8
VLIP+S+
Sbjct: 1479 VLIPVSV 1485
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 VLIPISLY 9
+L+P++LY
Sbjct: 1572 LLLPLALY 1579
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 VLIPISLY 9
+L+P++LY
Sbjct: 1572 LLLPLALY 1579
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 VLIPISLY 9
+L+P++LY
Sbjct: 1572 LLLPLALY 1579
>sp|ARBH_HHV8P|APOPTOSIS regulator Bcl-2 homolog|Human herpesvirus 8 type P
Query: 2 VLIPISLYV 10
+L PI LY+
Sbjct: 32 LLSPIKLYI 40
77|Sequence|381|390|ISLYVSIELV
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 ISLYVSIELV 10
++L+V +ELV
Sbjct: 1143 VALFVVLELV 1152
78|Sequence|386|395|SIELVKLGQV
>sp|V_MUMPE|NON-STRUCTURAL protein V|Mumps virus (strain Enders) (MuV)
Query: 1 SIELVKLGQ 9
S+EL K+G+
Sbjct: 124 SVELTKIGK 132
>sp|V_MUMPZ|NON-STRUCTURAL protein V|Mumps virus genotype N (strain
Query: 1 SIELVKLGQ 9
S+EL K+G+
Sbjct: 124 SVELAKIGK 132
>sp|V_MUMPS|NON-STRUCTURAL protein V|Mumps virus (strain SBL) (MuV)
Query: 1 SIELVKLGQ 9
S+EL K+G+
Sbjct: 124 SVELAKIGK 132
>sp|V_MUMPM|NON-STRUCTURAL protein V|Mumps virus genotype B (strain
Query: 1 SIELVKLGQ 9
S+EL K+G+
Sbjct: 124 SVELAKIGK 132
>sp|V_MUMPJ|NON-STRUCTURAL protein V|Mumps virus genotype A (strain
Query: 1 SIELVKLGQ 9
S+EL K+G+
Sbjct: 124 SVELAKIGK 132
>sp|V_MUMP1|NON-STRUCTURAL protein V|Mumps virus (strain SBL-1) (MuV)
Query: 1 SIELVKLGQ 9
S+EL K+G+
Sbjct: 124 SVELAKIGK 132
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 1 SIELVKLGQ 9
SIEL+ LG+
Sbjct: 364 SIELLPLGE 372
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 IELVKLGQV 10
+EL KLG+V
Sbjct: 1405 LELKKLGEV 1413
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 IELVKLGQV 10
+EL KLG+V
Sbjct: 1405 LELKKLGEV 1413
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 IELVKLGQV 10
+EL KLG+V
Sbjct: 1405 LELKKLGEV 1413
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 IELVKLGQV 10
+EL KLG+V
Sbjct: 1405 LELKKLGEV 1413
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 IELVKLGQV 10
+EL KLG+V
Sbjct: 1405 LELKKLGEV 1413
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 IELVKLGQV 10
+EL KLG+V
Sbjct: 1405 LELKKLGEV 1413
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 IELVKLGQV 10
+EL KLG+V
Sbjct: 1405 LELKKLGEV 1413
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 IELVKLGQV 10
+EL KLG+V
Sbjct: 1405 LELRKLGEV 1413
>sp|PHOSP_MUMPZ|PHOSPHOPROTEIN virus genotype N (strain
Query: 1 SIELVKLGQ 9
S+EL K+G+
Sbjct: 124 SVELAKIGK 132
>sp|I_MUMPZ|I virus genotype N (strain
Query: 1 SIELVKLGQ 9
S+EL K+G+
Sbjct: 124 SVELAKIGK 132
>sp|PHOSP_MUMPM|PHOSPHOPROTEIN virus genotype B (strain
Query: 1 SIELVKLGQ 9
S+EL K+G+
Sbjct: 124 SVELAKIGK 132
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 IELVKLGQV 10
+EL KLG++
Sbjct: 1405 LELKKLGEI 1413
>sp|I_MUMPJ|I virus genotype A (strain
Query: 1 SIELVKLGQ 9
S+EL K+G+
Sbjct: 124 SVELAKIGK 132
>sp|PHOSP_MUMPS|PHOSPHOPROTEIN virus (strain SBL) (MuV)
Query: 1 SIELVKLGQ 9
S+EL K+G+
Sbjct: 124 SVELAKIGK 132
>sp|V_PI2HT|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (strain
Query: 2 IELVKLGQ 9
+EL KLG+
Sbjct: 129 VELAKLGK 136
>sp|V_PI2H|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (HPIV-2)
Query: 2 IELVKLGQ 9
+EL KLG+
Sbjct: 129 VELAKLGK 136
>sp|PHOSP_MUMPE|PHOSPHOPROTEIN virus (strain Enders) (MuV)
Query: 1 SIELVKLGQ 9
S+EL K+G+
Sbjct: 124 SVELTKIGK 132
>sp|PHOSP_MUMP1|PHOSPHOPROTEIN virus (strain SBL-1) (MuV)
Query: 1 SIELVKLGQ 9
S+EL K+G+
Sbjct: 124 SVELAKIGK 132
>sp|PHOSP_MUMPJ|PHOSPHOPROTEIN virus genotype A (strain
Query: 1 SIELVKLGQ 9
S+EL K+G+
Sbjct: 124 SVELAKIGK 132
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 2 IELVKLG 8
+ELV+LG
Sbjct: 838 VELVQLG 844
>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 IELVKLG 8
+E+VKLG
Sbjct: 168 LEIVKLG 174
79|Sequence|391|400|KLGQVFFLSN
>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate
Query: 2 LGQVFFLS 9
LG++FFLS
Sbjct: 44 LGELFFLS 51
>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)
Query: 2 LGQVFFLS 9
LG++FFLS
Sbjct: 44 LGELFFLS 51
>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 2 LGQVFFLS 9
LG++FFLS
Sbjct: 44 LGELFFLS 51
>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 2 LGQVFFLS 9
LG++FFLS
Sbjct: 44 LGELFFLS 51
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 1 KLGQVFFL 8
+LG+VFF
Sbjct: 325 ELGKVFFF 332
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LGQVFFLS 9
LG+VFF++
Sbjct: 346 LGRVFFVT 353
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 KLGQVFFLSN 10
KLGQ LSN
Sbjct: 352 KLGQGIRLSN 361
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 KLGQVFFLSN 10
KLGQ LSN
Sbjct: 352 KLGQGIRLSN 361
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 1 KLGQVFFLSN 10
KLGQ LSN
Sbjct: 352 KLGQGIRLSN 361
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 LGQVFFLSN 10
LG+++F+S+
Sbjct: 496 LGRLYFISS 504
>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LGQVFFLSN 10
LG+++F+S+
Sbjct: 496 LGRLYFISS 504
>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LGQVFFLSN 10
LG+++F+S+
Sbjct: 495 LGRLYFISS 503
>sp|VEMP_CVHN5|ENVELOPE small membrane protein|Human coronavirus HKU1 (isolate N5)
Query: 2 LGQVFFL 8
+GQ+FFL
Sbjct: 13 VGQIFFL 19
>sp|VEMP_CVHN2|ENVELOPE small membrane protein|Human coronavirus HKU1 (isolate N2)
Query: 2 LGQVFFL 8
+GQ+FFL
Sbjct: 13 VGQIFFL 19
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 2 LGQVFFLS 9
LG++FF++
Sbjct: 406 LGRIFFVT 413
80|Sequence|396|405|FFLSNDLDLY
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 FLSNDLDLY 10
FL ND+D++
Sbjct: 510 FLKNDVDIF 518
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 FFLSND 6
FF SND
Sbjct: 657 FFFSND 662
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 FFLSNDLDL 9
F+L+ND+
Sbjct: 3114 FYLTNDVSF 3122
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 FFLSNDLD 8
FF+++D+D
Sbjct: 114 FFVAHDID 121
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 LSNDLDLY 10
++ND D+Y
Sbjct: 1228 ITNDSDIY 1235
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 FFLSNDLDL 9
F+L+ND+
Sbjct: 3114 FYLTNDVSF 3122
81|Sequence|401|410|DLDLYDEETD
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 1 DLDLYDEET 9
D DLYD +T
Sbjct: 196 DADLYDPDT 204
>sp|MATRX_VSNJO|MATRIX protein|Vesicular stomatitis New Jersey virus
Query: 1 DLDLYDEET 9
D+DLYD+++
Sbjct: 50 DMDLYDKDS 58
>sp|VE7_HPV33|PROTEIN E7|Human papillomavirus 33
Query: 2 LDLYDEETD 10
LDLY E TD
Sbjct: 13 LDLYPEPTD 21
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 1 DLDLYDEET 9
D DLYD +T
Sbjct: 102 DADLYDPDT 110
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 2 LDLYDEE 8
+D YDEE
Sbjct: 484 IDWYDEE 490
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 LYDEETD 10
LYD ETD
Sbjct: 995 LYDPETD 1001
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 2 LDLYDEETD 10
LDL++EE D
Sbjct: 627 LDLHEEEED 635
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 4 LYDEETD 10
LYD ETD
Sbjct: 995 LYDPETD 1001
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 LYDEETD 10
LYD ETD
Sbjct: 987 LYDPETD 993
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LDLYDEET 9
+ +YDEET
Sbjct: 248 MAVYDEET 255
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 4 LYDEETD 10
LYD ETD
Sbjct: 995 LYDPETD 1001
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LYDEETD 10
LYD ETD
Sbjct: 995 LYDPETD 1001
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 4 LYDEETD 10
LYD ETD
Sbjct: 995 LYDPETD 1001
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 4 LYDEETD 10
LYD ETD
Sbjct: 995 LYDPETD 1001
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 4 LYDEETD 10
LYD ETD
Sbjct: 995 LYDPETD 1001
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LDLYDEET 9
+ +YDEET
Sbjct: 248 MAVYDEET 255
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 4 LYDEETD 10
LYD ETD
Sbjct: 995 LYDPETD 1001
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 DLDLYDEETD 10
+LDL DEE +
Sbjct: 177 NLDLSDEEVN 186
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 1 DLDLYDEETD 10
D D++D ET+
Sbjct: 87 DKDIFDPETE 96
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 DLDLYDEETD 10
DL+LY EETD
Sbjct: 2077 DLELY-EETD 2085
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 1 DLDLYDEE 8
D+D YD++
Sbjct: 160 DMDAYDKK 167
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 1 DLDLYDE 7
DLD YD+
Sbjct: 160 DLDPYDK 166
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 DLDLYDE 7
DLD YD+
Sbjct: 160 DLDPYDK 166
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 1 DLDLYDE 7
DLD YD+
Sbjct: 160 DLDPYDK 166
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 DLDLYDE 7
DLD YD+
Sbjct: 160 DLDPYDK 166
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 DLDLYDE 7
DLD YD+
Sbjct: 160 DLDPYDK 166
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 DLDLYDE 7
DLD YD+
Sbjct: 160 DLDPYDK 166
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 DLDLYDE 7
DLD YD+
Sbjct: 160 DLDPYDK 166
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 DLDLYDE 7
DLD YD+
Sbjct: 160 DLDPYDK 166
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 1 DLDLYDEETD 10
D +LY+ +TD
Sbjct: 86 DPNLYNPDTD 95
>sp|YVBF_VACCC|UNCHARACTERIZED 8.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LYDEETD 10
++D ETD
Sbjct: 58 IFDSETD 64
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DLDLYDEE 8
DLDL DEE
Sbjct: 537 DLDLEDEE 544
>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LDLYDEETD 10
L+L+D TD
Sbjct: 194 LELHDGRTD 202
>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LDLYDEETD 10
L+L+D TD
Sbjct: 194 LELHDGRTD 202
82|Sequence|406|415|DEETDLSIQC
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 2 EETDLSIQC 10
EE D +QC
Sbjct: 210 EEVDRHLQC 218
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 2 EETDLSIQC 10
EE D +QC
Sbjct: 210 EEVDRHLQC 218
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 2 EETDLSIQC 10
EE D +QC
Sbjct: 210 EEVDRHLQC 218
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 2 EETDLSIQC 10
EE D +QC
Sbjct: 210 EEVDRHLQC 218
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 DEETDLSI 8
D E DLS+
Sbjct: 867 DNEVDLSV 874
>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DEETDLS 7
D+ETDLS
Sbjct: 252 DDETDLS 258
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 4 TDLSIQ 9
TDLS+Q
Sbjct: 763 TDLSVQ 768
>sp|PG190_VACCC|PROTEIN OPG190|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DEETDLS 7
D+ETDLS
Sbjct: 252 DDETDLS 258
>sp|PG190_VACCT|PROTEIN OPG190|Vaccinia virus (strain Tian Tan)
Query: 1 DEETDLS 7
D+ETDLS
Sbjct: 252 DDETDLS 258
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 4 TDLSIQ 9
TDLS+Q
Sbjct: 763 TDLSVQ 768
>sp|PG190_VACCL|PROTEIN OPG190|Vaccinia virus (strain Lister) (VACV)
Query: 1 DEETDLS 7
D+ETDLS
Sbjct: 252 DDETDLS 258
>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)
Query: 1 DEETDLS 7
D+ETDLS
Sbjct: 252 DDETDLS 258
>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)
Query: 1 DEETDLS 7
D+ETDLS
Sbjct: 252 DDETDLS 258
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 DEETDLSI 8
D E DLS+
Sbjct: 870 DNEIDLSV 877
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 1 DEETDLSIQ 9
D ETD+ ++
Sbjct: 222 DHETDMELK 230
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 1 DEETDLSIQ 9
D ETD+ ++
Sbjct: 222 DHETDMELK 230
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 1 DEETDLSIQ 9
D ETD+ ++
Sbjct: 227 DHETDMELK 235
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 1 DEETDLSIQ 9
D ETD+ ++
Sbjct: 227 DHETDMELK 235
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 1 DEETDLSIQ 9
D ETD+ ++
Sbjct: 226 DHETDMELK 234
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 1 DEETDLSIQ 9
D ETD+ ++
Sbjct: 227 DHETDMELK 235
>sp|VE6_HPV66|PROTEIN E6|Human papillomavirus 66
Query: 4 TDLSIQC 10
+DLSI+C
Sbjct: 100 SDLSIRC 106
>sp|VE6_HPV53|PROTEIN E6|Human papillomavirus type 53
Query: 4 TDLSIQC 10
+DLSI+C
Sbjct: 101 SDLSIRC 107
>sp|PHOSP_RABVD|PHOSPHOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 DEETDLSIQC 10
+EE DLS++
Sbjct: 190 NEEDDLSVEA 199
>sp|PHOSP_RABVN|PHOSPHOPROTEIN virus (strain Nishigahara RCEH)
Query: 1 DEETDLSIQC 10
+EE DLS++
Sbjct: 190 NEEDDLSVEA 199
83|Sequence|411|420|LSIQCRALNI
>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9
Query: 2 SIQCRA 7
S+QCRA
Sbjct: 121 SLQCRA 126
84|Sequence|416|425|RALNIAEDLG
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 2 ALNIAEDL 9
+LN AEDL
Sbjct: 125 SLNEAEDL 132
85|Sequence|421|430|AEDLGQIQYI
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 EDLGQIQYI 10
EDLG QY+
Sbjct: 2210 EDLGVDQYL 2218
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 AEDLGQIQYI 10
ED+ I+YI
Sbjct: 429 GEDVAPIEYI 438
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 AEDLGQIQYI 10
AE LG+++Y+
Sbjct: 252 AELLGRVRYM 261
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 EDLGQIQYI 10
+DL Q++Y+
Sbjct: 34 KDLEQVRYV 42
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 4 LGQIQY 9
+GQ+QY
Sbjct: 417 VGQVQY 422
86|Sequence|426|435|QIQYIFSDKT
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 QYIFSDKT 10
Q +FSD+T
Sbjct: 45 QTLFSDRT 52
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 2 IQYIFSDK 9
I+YI+SD+
Sbjct: 155 IEYIYSDE 162
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 2 IQYIFSDK 9
I+YI+SD+
Sbjct: 155 IEYIYSDE 162
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 IQYIFSDKT 10
I Y FSD T
Sbjct: 1676 INYNFSDNT 1684
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 IQYIFSDKT 10
I Y FSD T
Sbjct: 1676 INYNFSDNT 1684
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 1 QIQYIFSDKT 10
Q+Q+ F D T
Sbjct: 331 QLQHSFEDST 340
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 IQYIFSDKT 10
I Y FSD T
Sbjct: 1676 ISYNFSDNT 1684
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 5 IFSDKT 10
IF+DKT
Sbjct: 84 IFADKT 89
87|Sequence|431|440|FSDKTGTLTE
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 FSDKTGTLT 9
++ +TGTLT
Sbjct: 25 YTSRTGTLT 33
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FSDKTG 6
FSD+TG
Sbjct: 48 FSDRTG 53
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 DKTGTLTE 10
D T TLTE
Sbjct: 193 DSTSTLTE 200
>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 DKTGTLTE 10
D T TLTE
Sbjct: 193 DSTSTLTE 200
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 2 SDKTGTLTE 10
S KTG LT+
Sbjct: 211 SSKTGHLTD 219
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 SDKTGTLTE 10
S KTG LT+
Sbjct: 211 SSKTGHLTD 219
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 2 SDKTGTLTE 10
S KTG LT+
Sbjct: 211 SSKTGHLTD 219
>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 270 SGKTGTIT 277
>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 270 SGKTGTIT 277
>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 255 SGKTGTIT 262
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 263 SGKTGTIT 270
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 266 SGKTGTIT 273
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 270 SGKTGTIT 277
>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 262 SGKTGTIT 269
>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 270 SGKTGTIT 277
>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 255 SGKTGTIT 262
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 270 SGKTGTIT 277
>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 255 SGKTGTIT 262
>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 255 SGKTGTIT 262
>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 255 SGKTGTIT 262
>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 255 SGKTGTIT 262
>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 255 SGKTGTIT 262
>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 255 SGKTGTIT 262
>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 255 SGKTGTIT 262
>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 255 SGKTGTIT 262
>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 255 SGKTGTIT 262
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 2 SDKTGTLT 9
S KTGT+T
Sbjct: 263 SGKTGTIT 270
88|Sequence|436|445|GTLTENKMVF
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 TLTENKMVF 10
T TENK+V+
Sbjct: 948 TRTENKLVW 956
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GTLTENKM 8
GT T NKM
Sbjct: 149 GTFTYNKM 156
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GTLTENKMV 9
G+L E KM+
Sbjct: 264 GSLAEEKMI 272
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 1 GTLTENKMVF 10
G ENK++F
Sbjct: 311 GIYFENKLIF 320
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 1 GTLTENKMVF 10
G ENK++F
Sbjct: 311 GIYFENKLIF 320
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 1 GTLTENKMVF 10
G ENK++F
Sbjct: 311 GIYFENKLIF 320
>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka
Query: 3 LTENKMVF 10
LTE++++F
Sbjct: 47 LTEDELIF 54
>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)
Query: 3 LTENKMVF 10
LTE++++F
Sbjct: 47 LTEDELIF 54
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 1 GTLTENKMVF 10
G ENK++F
Sbjct: 311 GIYFENKLIF 320
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 1 GTLTENKMVF 10
G ENK++F
Sbjct: 311 GIYFENKLIF 320
89|Sequence|441|450|NKMVFRRCTI
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 MVFRRCT 9
M+FR CT
Sbjct: 1268 MIFRACT 1274
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 MVFRRCT 9
++FR CT
Sbjct: 1268 LIFRACT 1274
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 MVFRRCT 9
++FR CT
Sbjct: 1268 LIFRACT 1274
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 MVFRRCT 9
++FR CT
Sbjct: 1268 LIFRACT 1274
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 MVFRRCT 9
++FR CT
Sbjct: 1268 LIFRACT 1274
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 MVFRRCT 9
++FR CT
Sbjct: 1268 LIFRACT 1274
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 KMVFRRCTI 10
K F RCT+
Sbjct: 483 KHYFERCTL 491
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 MVFRRCTI 10
+V+R CT+
Sbjct: 1811 IVYRNCTL 1818
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 MVFRRCTI 10
+V+R CT+
Sbjct: 1811 IVYRNCTL 1818
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 KMVFRRCTI 10
K F RCT+
Sbjct: 467 KHYFERCTL 475
>sp|GPX_MCV1|GLUTATHIONE peroxidase|Molluscum contagiosum virus subtype 1
Query: 1 NKMVFRRCTI 10
N M+F +C +
Sbjct: 123 NFMLFEKCEV 132
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 2 KMVFRRCTI 10
K +F RCT+
Sbjct: 304 KCLFERCTL 312
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 MVFRRCT 9
++FR CT
Sbjct: 1268 IIFRACT 1274
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 KMVFRRCTI 10
K++FR C +
Sbjct: 1546 KLIFRYCIL 1554
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 2 KMVFRRCTI 10
K +F RCT+
Sbjct: 303 KCLFERCTL 311
>sp|PG067_MONPV|PROTEIN OPG067|Monkeypox virus (MPXV)
Query: 1 NKMVFRRC 8
+KM++ RC
Sbjct: 102 SKMIYARC 109
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 MVFRRCTI 10
+VFR C +
Sbjct: 1811 IVFRNCAL 1818
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 KMVFRRCTI 10
K +F RC++
Sbjct: 442 KHLFERCSL 450
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 2 KMVFRRCTI 10
K +F RC++
Sbjct: 442 KHLFERCSL 450
90|Sequence|446|455|RRCTIMGSEY
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 RRCTIMG 7
RRC I+G
Sbjct: 81 RRCNIVG 87
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 RRCTIMG 7
RRC I+G
Sbjct: 81 RRCNIVG 87
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 RRCTIMG 7
RRC I+G
Sbjct: 81 RRCNIVG 87
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 RRCTIMG 7
RRC I+G
Sbjct: 81 RRCNIVG 87
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 1 RRCTIMGSEY 10
R CT+MG +
Sbjct: 440 RACTLMGMRW 449
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 RRCTIMGS 8
RRC +MG+
Sbjct: 599 RRCHLMGA 606
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 RRCTIMGSEY 10
RR ++GS Y
Sbjct: 1402 RRQAVLGSSY 1411
91|Sequence|451|460|MGSEYSHQEN
>sp|V_PI4HB|NON-STRUCTURAL protein V|Human parainfluenza 4b virus (strain
Query: 4 EYSHQE 9
EYSHQE
Sbjct: 154 EYSHQE 159
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 MGSEYSHQEN 10
MG EY H ++
Sbjct: 191 MGEEYFHHQS 200
>sp|GPX_MCV1|GLUTATHIONE peroxidase|Molluscum contagiosum virus subtype 1
Query: 3 SEYSHQEN 10
+++ HQEN
Sbjct: 94 NQFGHQEN 101
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 5 YSHQEN 10
+SH+EN
Sbjct: 10 FSHEEN 15
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 5 YSHQEN 10
+SH+EN
Sbjct: 10 FSHEEN 15
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 4 EYSHQEN 10
EY+H++N
Sbjct: 825 EYTHKDN 831
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 3 SEYSHQEN 10
+ +SHQ+N
Sbjct: 252 TSFSHQKN 259
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 MGSEYSHQEN 10
MG++ S Q N
Sbjct: 1 MGAQVSRQNN 10
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 3 SEYSHQEN 10
SEY+ Q+N
Sbjct: 214 SEYAKQKN 221
92|Sequence|456|465|SHQENAKRLE
>sp|TEG7_VZVO|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SHQENAKRL 9
SH EN+KRL
Sbjct: 106 SHMENSKRL 114
>sp|TEG7_VZVD|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SHQENAKRL 9
SH EN+KRL
Sbjct: 106 SHMENSKRL 114
>sp|GPX_MCV1|GLUTATHIONE peroxidase|Molluscum contagiosum virus subtype 1
Query: 2 HQENAKRLE 10
HQENA+ E
Sbjct: 98 HQENAQNAE 106
>sp|RL9A_HCMVM|PROTEIN RL9A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SHQENAKRL 9
SHQ A+RL
Sbjct: 7 SHQPAARRL 15
>sp|PHOSP_PI3H4|PHOSPHOPROTEIN parainfluenza 3 virus (strain
Query: 1 SHQENAKRL 9
+HQE+ KR+
Sbjct: 230 THQEDDKRI 238
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 SHQENAKRLE 10
S + N KRLE
Sbjct: 1109 SERSNVKRLE 1118
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 1 SHQENA 6
SHQ+NA
Sbjct: 632 SHQQNA 637
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SHQENAKRLE 10
S + N KRLE
Sbjct: 222 SERSNVKRLE 231
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 3 QENAKRL 9
+ENA+RL
Sbjct: 347 EENARRL 353
93|Sequence|461|470|AKRLETPKEL
>sp|A40_VACCC|PROTEIN A40|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 RLETPKEL 10
++ETP EL
Sbjct: 95 KIETPNEL 102
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 2 KRLETPKE 9
KRLE P E
Sbjct: 326 KRLEEPVE 333
>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 2 KRLETPKE 9
KRLE P E
Sbjct: 326 KRLEEPVE 333
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 1 AKRLETPK 8
K+LE PK
Sbjct: 58 GKKLEVPK 65
>sp|PG121_MONPV|MRNA-DECAPPING protein OPG121|Monkeypox virus (MPXV)
Query: 4 LETPKEL 10
ETP+EL
Sbjct: 11 FETPREL 17
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 5 ETPKEL 10
ETPK+L
Sbjct: 830 ETPKQL 835
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 5 ETPKEL 10
ETPK+L
Sbjct: 830 ETPKQL 835
>sp|PG121_VAR67|MRNA-DECAPPING protein OPG121|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 LETPKEL 10
ETP+EL
Sbjct: 11 FETPREL 17
>sp|D9_VARV|MRNA-DECAPPING protein D9|Variola virus
Query: 4 LETPKEL 10
ETP+EL
Sbjct: 11 FETPREL 17
>sp|PG121_VACCC|MRNA-DECAPPING protein OPG121|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LETPKEL 10
ETP+EL
Sbjct: 11 FETPREL 17
>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus
Query: 2 KRLETPKE 9
K+LE P E
Sbjct: 66 KKLELPSE 73
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus
Query: 2 KRLETPKE 9
K+LE P E
Sbjct: 66 KKLELPSE 73
94|Sequence|466|475|TPKELDSDGE
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 PKELDSDGE 10
P+EL +DGE
Sbjct: 42 PEELLTDGE 50
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 PKELDSDGE 10
P+EL +DGE
Sbjct: 42 PEELLTDGE 50
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 2 PKELDSDGE 10
P+EL +DGE
Sbjct: 42 PEELLTDGE 50
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d
Query: 2 PKELDSDGE 10
P+EL +DGE
Sbjct: 42 PEELLTDGE 50
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 PKELDSDGE 10
P+EL +DGE
Sbjct: 42 PEELLTDGE 50
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 2 PKELDSDGE 10
P+EL +DGE
Sbjct: 42 PEELLTDGE 50
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TPKELDSDG 9
+P E D DG
Sbjct: 90 SPNETDDDG 98
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 1 TPKELDSDG 9
T KEL SDG
Sbjct: 798 TTKELKSDG 806
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 1 TPKELDSDG 9
+P E D DG
Sbjct: 60 SPNETDDDG 68
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 TPKELDSDG 9
+P E D DG
Sbjct: 64 SPNETDDDG 72
>sp|US07_HCMVA|UNIQUE short US7 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PKELDSDGE 10
P E+ +DG+
Sbjct: 100 PHEIQNDGQ 108
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 1 TPKELDS 7
TP+ELD+
Sbjct: 157 TPEELDT 163
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 4 ELDSDGE 10
ELDS+G+
Sbjct: 1444 ELDSNGD 1450
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 KELDSD 8
KE+DSD
Sbjct: 32 KEMDSD 37
>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PKELDSDGE 10
P E+ +DG+
Sbjct: 100 PHEVQNDGQ 108
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 2 PKELDSDGE 10
P+E DS+ E
Sbjct: 630 PREEDSEAE 638
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 TPKELD 6
TP+E+D
Sbjct: 545 TPREMD 550
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 TPKELD 6
TP+E+D
Sbjct: 545 TPREMD 550
95|Sequence|471|480|DSDGEEWTQY
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 DGEEWTQY 10
DG EW QY
Sbjct: 1112 DGTEWFQY 1119
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 DGEEWTQY 10
DG EW QY
Sbjct: 1112 DGTEWFQY 1119
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 1 DSDGEEW 7
DSDG++W
Sbjct: 254 DSDGQDW 260
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 1 DSDGEEW 7
D+DG++W
Sbjct: 262 DNDGQDW 268
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 1 DSDGEEWTQY 10
+ +G EW +Y
Sbjct: 246 NKNGSEWQEY 255
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 DSDGEEWTQY 10
D DG +W +
Sbjct: 1443 DPDGADWADF 1452
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 GEEWTQ 9
GEEWT+
Sbjct: 1209 GEEWTK 1214
>sp|NCAP_PTPV|NUCLEOPROTEIN toro phlebovirus
Query: 1 DSDGEEWTQ 9
D GE+W Q
Sbjct: 43 DRGGEDWKQ 51
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 DSDGEEWTQY 10
D DG +W +
Sbjct: 1440 DPDGADWADF 1449
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 GEEWTQ 9
GEEWT+
Sbjct: 1209 GEEWTK 1214
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 GEEWTQ 9
GEEWT+
Sbjct: 1209 GEEWTK 1214
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 GEEWTQ 9
GEEWT+
Sbjct: 1209 GEEWTK 1214
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 GEEWTQ 9
GEEWT+
Sbjct: 1209 GEEWTK 1214
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DSDGEEW 7
D+DG++W
Sbjct: 262 DNDGQDW 268
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 3 DGEEWT 8
DG EWT
Sbjct: 184 DGREWT 189
Query: 3 DGEEWT 8
DG+ WT
Sbjct: 384 DGDPWT 389
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 3 DGEEWT 8
DG EWT
Sbjct: 184 DGREWT 189
Query: 3 DGEEWT 8
DG+ WT
Sbjct: 384 DGDPWT 389
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 3 DGEEWT 8
DG EWT
Sbjct: 184 DGREWT 189
Query: 3 DGEEWT 8
DG+ WT
Sbjct: 384 DGDPWT 389
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 3 DGEEWT 8
DG EWT
Sbjct: 183 DGREWT 188
Query: 3 DGEEWT 8
DG+ WT
Sbjct: 383 DGDPWT 388
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 3 DGEEWT 8
DG EWT
Sbjct: 183 DGREWT 188
Query: 3 DGEEWT 8
DG+ WT
Sbjct: 383 DGDPWT 388
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 3 DGEEWT 8
DG EWT
Sbjct: 183 DGREWT 188
Query: 3 DGEEWT 8
DG+ WT
Sbjct: 383 DGDPWT 388
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 3 DGEEWTQ 9
DG EW +
Sbjct: 84 DGREWVE 90
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 3 DGEEWTQ 9
DG EW +
Sbjct: 84 DGREWVE 90
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 3 DGEEW 7
DG+EW
Sbjct: 84 DGKEW 88
>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain
Query: 3 DGEEW 7
+GEEW
Sbjct: 307 EGEEW 311
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 DSDGEEWTQY 10
DSD + +T Y
Sbjct: 204 DSDTQRYTSY 213
>sp|KRB2_MONPV|PSEUDOKINASE OPG198|Monkeypox virus (MPXV)
Query: 1 DSDGEEW 7
D+DG++W
Sbjct: 9 DNDGKKW 15
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 DSDGEEWTQY 10
DSD + +T Y
Sbjct: 204 DSDKQRYTSY 213
>sp|KRB2_VACCC|PSEUDOKINASE OPG198|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DSDGEEW 7
D+DG++W
Sbjct: 9 DNDGKKW 15
>sp|KRB2_VACCA|PSEUDOKINASE OPG198|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DSDGEEW 7
D+DG++W
Sbjct: 9 DNDGKKW 15
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 3 DGEEWT 8
DG EWT
Sbjct: 184 DGREWT 189
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 3 DGEEWT 8
DG EWT
Sbjct: 183 DGREWT 188
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 3 DGEEWT 8
DG EWT
Sbjct: 184 DGREWT 189
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 3 DGEEWT 8
DG EWT
Sbjct: 184 DGREWT 189
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 3 DGEEWT 8
DG EWT
Sbjct: 183 DGREWT 188
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 3 DGEEWT 8
DG EWT
Sbjct: 184 DGREWT 189
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 DSDGEEWT 8
DSD + W+
Sbjct: 2423 DSDSKSWS 2430
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 5 EEWTQY 10
E+WT Y
Sbjct: 87 EDWTSY 92
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 DSDGEEWT 8
DSD + W+
Sbjct: 2423 DSDSKSWS 2430
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 1 DSDGEEWTQ 9
+ DGE WT+
Sbjct: 141 NCDGEGWTK 149
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 5 EEWTQY 10
E+WT Y
Sbjct: 87 EDWTSY 92
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 5 EEWTQY 10
E+WT Y
Sbjct: 87 EDWTSY 92
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 5 EEWTQY 10
E+WT Y
Sbjct: 87 EDWTSY 92
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 3 DGEEWTQ 9
DG EW +
Sbjct: 84 DGREWVE 90
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 5 EEWTQY 10
E+WT Y
Sbjct: 87 EDWTSY 92
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 5 EEWTQY 10
E+WT Y
Sbjct: 87 EDWTSY 92
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 5 EEWTQY 10
E+WT Y
Sbjct: 87 EDWTSY 92
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 5 EEWTQY 10
E+WT Y
Sbjct: 87 EDWTSY 92
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 5 EEWTQY 10
E+WT Y
Sbjct: 87 EDWTSY 92
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 3 DGEEWTQ 9
DG EW +
Sbjct: 84 DGREWVE 90
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 5 EEWTQY 10
E+WT Y
Sbjct: 87 EDWTSY 92
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 4 GEEWTQY 10
GE W +Y
Sbjct: 2053 GEYWEEY 2059
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 5 EEWTQY 10
E+WT Y
Sbjct: 87 EDWTSY 92
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 5 EEWTQY 10
E+WT Y
Sbjct: 87 EDWTSY 92
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 5 EEWTQY 10
E+WT Y
Sbjct: 87 EDWTSY 92
>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 5 EEWTQY 10
E+WT Y
Sbjct: 87 EDWTSY 92
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 SDGEEWT 8
SDG+E+T
Sbjct: 681 SDGKEYT 687
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 SDGEEWT 8
SDG+E+T
Sbjct: 681 SDGKEYT 687
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 SDGEEWT 8
SDG+E+T
Sbjct: 681 SDGKEYT 687
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 DSDGEEWTQY 10
+ DG +W Y
Sbjct: 1111 EDDGTDWFMY 1120
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 4 GEEWTQY 10
G+E TQY
Sbjct: 624 GQEITQY 630
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 4 GEEWTQY 10
G+E TQY
Sbjct: 624 GQEITQY 630
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 DGEEWTQY 10
DG EW ++
Sbjct: 1112 DGTEWFRF 1119
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 SDGEEWTQ 9
S+G W Q
Sbjct: 71 SEGRSWAQ 78
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 3 DGEEW 7
DG+EW
Sbjct: 84 DGKEW 88
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 SDGEEWTQ 9
S+G W Q
Sbjct: 71 SEGRSWAQ 78
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 DSDGEE 6
DSDGE+
Sbjct: 642 DSDGED 647
>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)
Query: 4 GEEWTQ 9
GEEW +
Sbjct: 284 GEEWKR 289
>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)
Query: 4 GEEWTQ 9
GEEW +
Sbjct: 284 GEEWKR 289
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 4 GEEWTQ 9
GE WT+
Sbjct: 200 GEHWTK 205
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 GEEWT 8
GE WT
Sbjct: 244 GESWT 248
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 4 GEEWT 8
GE WT
Sbjct: 420 GERWT 424
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 4 GEEWTQ 9
GE WT+
Sbjct: 167 GEHWTK 172
96|Sequence|476|485|EWTQYQCLSF
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 WTQYQCLSF 10
W +Y+CLSF
Sbjct: 292 WPRYRCLSF 300
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 WTQYQCLSF 10
W +Y+CLSF
Sbjct: 292 WPRYRCLSF 300
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 2 WTQYQCLSF 10
W YQ L+F
Sbjct: 287 WPSYQALAF 295
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 2 WTQYQCLSF 10
W YQ L+F
Sbjct: 287 WPSYQALAF 295
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 2 WTQYQCLSF 10
W YQ L+F
Sbjct: 287 WPSYQALAF 295
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 1 EWTQYQCLSF 10
EW Y LSF
Sbjct: 286 EWPPYTILSF 295
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 3 TQYQCL 8
+QYQCL
Sbjct: 348 SQYQCL 353
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 3 TQYQCL 8
+QYQCL
Sbjct: 348 SQYQCL 353
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 3 TQYQCL 8
+QYQCL
Sbjct: 348 SQYQCL 353
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 EWTQYQC 7
+W QY+C
Sbjct: 420 QWIQYRC 426
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 1 EWTQYQCL 8
E T YQCL
Sbjct: 102 EPTDYQCL 109
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 1 EWTQYQC 7
+W QY+C
Sbjct: 414 QWLQYRC 420
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 3 TQYQCLSF 10
T+YQ L+F
Sbjct: 47 TRYQMLNF 54
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 3 TQYQCLSF 10
T+YQ L+F
Sbjct: 47 TRYQMLNF 54
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 2 WTQYQCLSF 10
W +Y CL
Sbjct: 60 WPRYWCLEL 68
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 3 TQYQCLSF 10
T+YQ L+F
Sbjct: 47 TRYQMLNF 54
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 QYQCL 8
QY+CL
Sbjct: 991 QYECL 995
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 QYQCL 8
QY+CL
Sbjct: 991 QYECL 995
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 QYQCL 8
QY+CL
Sbjct: 991 QYECL 995
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 EWTQYQCLSF 10
+W + C SF
Sbjct: 2495 QWNCFNCHSF 2504
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 EWTQYQCLSF 10
+W + C SF
Sbjct: 2525 QWNCFNCHSF 2534
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 3 TQYQCLSF 10
T+YQ L+F
Sbjct: 47 TRYQMLNF 54
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 EWTQYQCLSF 10
+W + C SF
Sbjct: 2475 QWNCFNCHSF 2484
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 EWTQYQCLSF 10
+W + C SF
Sbjct: 2495 QWNCFNCHSF 2504
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 EWTQYQCLSF 10
+W + C SF
Sbjct: 2525 QWNCFNCHSF 2534
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 EWTQYQCLSF 10
+W + C SF
Sbjct: 2475 QWNCFNCHSF 2484
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 1 EWTQYQC 7
EWT QC
Sbjct: 397 EWTLQQC 403
>sp|U148C_HCMVM|PROTEIN UL148C|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 WTQYQCLSF 10
WT +CL++
Sbjct: 58 WTFVRCLAY 66
97|Sequence|481|490|QCLSFSARWA
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CLSFSARW 9
CLS S RW
Sbjct: 2974 CLSTSGRW 2981
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 CLSFSARW 9
CLS S RW
Sbjct: 2974 CLSTSGRW 2981
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CLSFSARW 9
C+S S RW
Sbjct: 2997 CVSTSGRW 3004
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 CLSFSARW 9
C+S S RW
Sbjct: 2997 CVSTSGRW 3004
>sp|U79_HHV7J|PROTEIN U79|Human herpesvirus 7 (strain JI)
Query: 1 QCLSFSAR 8
QC ++SAR
Sbjct: 81 QCKTYSAR 88
>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)
Query: 2 CLSFSAR 8
C++F+AR
Sbjct: 218 CVTFAAR 224
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 QCLSFS 6
+CLSFS
Sbjct: 6746 KCLSFS 6751
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 CLSFSARW 9
C +F++ W
Sbjct: 3071 CFNFNSSW 3078
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 CLSFSARW 9
C +F++ W
Sbjct: 3071 CFNFNSSW 3078
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 CLSFSARW 9
C +F++ W
Sbjct: 3041 CFNFNSSW 3048
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 CLSFSARW 9
C +F++ W
Sbjct: 3041 CFNFNSSW 3048
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 CLSFSARW 9
C +F++ W
Sbjct: 3021 CFNFNSSW 3028
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 CLSFSARW 9
C +F++ W
Sbjct: 3021 CFNFNSSW 3028
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 LSFSARW 9
LSF +W
Sbjct: 1225 LSFDTKW 1231
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 LSFSARW 9
LSF +W
Sbjct: 1225 LSFDTKW 1231
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 LSFSARW 9
LSF +W
Sbjct: 1225 LSFDTKW 1231
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 QCLSFSA 7
QCL F+A
Sbjct: 30 QCLFFNA 36
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 2 CLSFSAR 8
C++F+AR
Sbjct: 218 CVTFAAR 224
>sp|VE6_HPV65|PROTEIN E6|Human papillomavirus 65
Query: 1 QCLSFSARW 9
+CL SAR+
Sbjct: 62 ECLRLSARF 70
98|Sequence|486|495|SARWAQDPAT
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 3 RWAQDPAT 10
RW QDP T
Sbjct: 327 RWEQDPLT 334
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 3 RWAQDPAT 10
RW QDP T
Sbjct: 327 RWEQDPLT 334
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2118 SIRWTKDP 2125
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 3 RWAQDPAT 10
RW QDP T
Sbjct: 252 RWRQDPQT 259
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2117 SIRWTRDP 2124
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2091 SIRWTKDP 2098
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2122 SIRWTKDP 2129
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2130 SIRWTKDP 2137
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2122 SIRWTKDP 2129
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2133 SIRWTKDP 2140
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2134 SIRWTKDP 2141
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2132 SIRWTKDP 2139
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2121 SIRWTKDP 2128
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2142 SIRWTKDP 2149
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2124 SIRWTKDP 2131
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2135 SIRWTKDP 2142
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2123 SIRWTKDP 2130
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2126 SIRWTKDP 2133
Query: 5 AQDPAT 10
AQDP+T
Sbjct: 698 AQDPST 703
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2124 SIRWTKDP 2131
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2133 SIRWTKDP 2140
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2132 SIRWTKDP 2139
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2124 SIRWTKDP 2131
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2123 SIRWTKDP 2130
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2140 SIRWTKDP 2147
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2145 SIRWTKDP 2152
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2148 SIRWTKDP 2155
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2153 SIRWTKDP 2160
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2148 SIRWTKDP 2155
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2144 SIRWTKDP 2151
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2146 SIRWTKDP 2153
>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 227 QWSQDP 232
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2145 SIRWTKDP 2152
>sp|PB2_I01A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 227 QWSQDP 232
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 SARWAQDP 8
S RW +DP
Sbjct: 2145 SIRWTKDP 2152
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 555 QWSQDP 560
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 2 ARWAQDP 8
ARW+ DP
Sbjct: 513 ARWSLDP 519
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 556 QWSQDP 561
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 2 ARWAQDP 8
ARW+ DP
Sbjct: 514 ARWSLDP 520
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 562 QWSQDP 567
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 557 QWSQDP 562
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 3 RWAQDP 8
+W+QDP
Sbjct: 563 QWSQDP 568
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 2 ARWAQDP 8
ARW+ DP
Sbjct: 507 ARWSLDP 513
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 3 RWAQDPA 9
+W+Q+PA
Sbjct: 563 QWSQNPA 569
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 3 RWAQDPA 9
+W+Q+PA
Sbjct: 563 QWSQNPA 569
>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4
Query: 2 ARWAQDP 8
ARW+ DP
Sbjct: 405 ARWSLDP 411
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 2 ARWAQDP 8
ARW+ DP
Sbjct: 493 ARWSPDP 499
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 2 ARWAQDP 8
ARW+ DP
Sbjct: 440 ARWSLDP 446
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 2 ARWAQDP 8
ARW+ DP
Sbjct: 495 ARWSPDP 501
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 4 WAQDP 8
WA DP
Sbjct: 994 WASDP 998
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 4 WAQDP 8
WA DP
Sbjct: 1053 WASDP 1057
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 4 WAQDP 8
WA DP
Sbjct: 994 WASDP 998
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 WAQDP 8
WA DP
Sbjct: 994 WASDP 998
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 WAQDP 8
WA DP
Sbjct: 994 WASDP 998
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 WAQDP 8
WA DP
Sbjct: 1053 WASDP 1057
>sp|E3CR1_ADE02|EARLY 3 Conserved Region 1-alpha|Human adenovirus C serotype 2
Query: 3 RWAQDP 8
RW Q P
Sbjct: 55 RWGQHP 60
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 SARWAQDPAT 10
SAR A PAT
Sbjct: 1290 SARLAGAPAT 1299
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 WAQDP 8
WA+DP
Sbjct: 98 WAEDP 102
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 ARWAQDP 8
A W+QDP
Sbjct: 810 APWSQDP 816
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 ARWAQDP 8
A W+QDP
Sbjct: 827 APWSQDP 833
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 4 WAQDPA 9
WA+DP
Sbjct: 713 WAEDPG 718
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 3 RWAQDPAT 10
RW DP T
Sbjct: 322 RWHGDPRT 329
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 3 RWAQDP 8
+W+Q+P
Sbjct: 563 QWSQEP 568
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWAQDP 8
+W+Q+P
Sbjct: 563 QWSQEP 568
99|Sequence|491|500|QDPATMRSQK
>sp|DNBI_ADE07|PROBABLE DNA-binding protein|Human adenovirus B serotype 7
Query: 1 QDPATMRSQ 9
Q P T+RSQ
Sbjct: 125 QGPETLRSQ 133
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 1 QDPATMR 7
QDP T+R
Sbjct: 89 QDPWTLR 95
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 DPATMRS 8
DPATM S
Sbjct: 257 DPATMLS 263
Query: 2 DPATMRSQ 9
DP T++SQ
Sbjct: 28 DPLTVKSQ 35
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DPATMRS 8
DPATM S
Sbjct: 257 DPATMLS 263
Query: 2 DPATMRSQ 9
DP T++SQ
Sbjct: 28 DPLTVKSQ 35
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 DPATMRSQK 10
DPA +RS +
Sbjct: 1339 DPALLRSAR 1347
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 DPATMRSQK 10
DPA +RS +
Sbjct: 1339 DPALLRSAR 1347
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 DPATMRSQ 9
DP T++SQ
Sbjct: 28 DPLTVKSQ 35
100|Sequence|496|505|MRSQKGAQPL
>sp|PG099_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 1 MRSQKGAQPL 10
+RS G+QP+
Sbjct: 111 LRSINGSQPV 120
>sp|PG099_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 1 MRSQKGAQPL 10
+RS G+QP+
Sbjct: 111 LRSINGSQPV 120
>sp|PG099_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 MRSQKGAQPL 10
+RS G+QP+
Sbjct: 111 LRSINGSQPV 120
>sp|PG099_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 1 MRSQKGAQPL 10
+RS G+QP+
Sbjct: 111 LRSINGSQPV 120
>sp|PG099_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 1 MRSQKGAQPL 10
+RS G+QP+
Sbjct: 111 LRSINGSQPV 120
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 MRSQKGAQPL 10
+R Q+G PL
Sbjct: 457 LRVQRGDNPL 466
101|Sequence|501|510|GAQPLRRSQS
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 3 QPLRRSQS 10
QPL RSQS
Sbjct: 339 QPLGRSQS 346
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 4 PLRRSQS 10
PLRRSQ+
Sbjct: 105 PLRRSQA 111
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 4 PLRRSQS 10
PLRRS++
Sbjct: 105 PLRRSET 111
102|Sequence|506|515|RRSQSARVPI
***** No hits found ******
103|Sequence|511|520|ARVPIQGHYR
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 ARVPIQG 7
ARVP++G
Sbjct: 789 ARVPLEG 795
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 5 IQGHY 9
IQGHY
Sbjct: 1032 IQGHY 1036
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 ARVPIQG 7
+R PIQG
Sbjct: 121 SRCPIQG 127
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RVPIQGHYR 10
R+P+ GH R
Sbjct: 23 RLPLPGHAR 31
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 VPIQGHYR 10
VPI G Y+
Sbjct: 200 VPIYGRYK 207
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 VPIQGH 8
VPI GH
Sbjct: 252 VPITGH 257
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 VPIQGH 8
VPI GH
Sbjct: 252 VPITGH 257
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 VPIQGH 8
VPI GH
Sbjct: 252 VPITGH 257
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 1 ARVPIQGHY 9
A VP+ HY
Sbjct: 143 ASVPLNPHY 151
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 5 IQGHY 9
+QGHY
Sbjct: 766 LQGHY 770
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 5 IQGHY 9
+QGHY
Sbjct: 767 LQGHY 771
104|Sequence|516|525|QGHYRQRSMG
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 QGHYRQRSM 9
QGH +Q+S+
Sbjct: 1868 QGHLQQKSV 1876
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 QGHYRQRSM 9
QGH +Q+S+
Sbjct: 1911 QGHLQQKSV 1919
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 QGHYRQRSM 9
QGH +Q+S+
Sbjct: 1895 QGHLQQKSV 1903
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 QGHYRQRSM 9
QGH +Q+S+
Sbjct: 1895 QGHLQQKSV 1903
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 QGHYRQRSM 9
QGH +Q+S+
Sbjct: 1901 QGHLQQKSV 1909
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 QGHYRQRSM 9
QGH +Q+S+
Sbjct: 1887 QGHLQQKSV 1895
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 QGHYRQRSM 9
QGH +Q+S+
Sbjct: 1912 QGHLQQKSV 1920
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 QGHYRQRSM 9
QGH +Q+S+
Sbjct: 1911 QGHLQQKSV 1919
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 QGHYRQRS 8
QGH +Q+S
Sbjct: 1895 QGHLQQKS 1902
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 QGHYRQRS 8
QGH +Q+S
Sbjct: 1875 QGHLQQKS 1882
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 QGHYRQRS 8
QGH +Q+S
Sbjct: 1872 QGHLQQKS 1879
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GHYRQRS 8
GH+R+RS
Sbjct: 52 GHFRRRS 58
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GHYRQRS 8
GH+R+RS
Sbjct: 52 GHFRRRS 58
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 GHYRQRSM 9
GH +QRS+
Sbjct: 1873 GHLQQRSV 1880
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 GHYRQRSM 9
GH +QRS+
Sbjct: 1866 GHLQQRSV 1873
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 GHYRQRSM 9
GH +QRS+
Sbjct: 1811 GHLQQRSV 1818
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 3 HYRQRSM 9
H RQ+SM
Sbjct: 1298 HKRQKSM 1304
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 3 HYRQRS 8
H+RQR+
Sbjct: 248 HFRQRA 253
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 3 HYRQRS 8
H+RQR+
Sbjct: 248 HFRQRA 253
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 QGHYRQRSMG 10
+GH RSMG
Sbjct: 863 RGHDNLRSMG 872
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 QGHYRQ 6
GHYR+
Sbjct: 674 HGHYRK 679
105|Sequence|521|530|QRSMGHRESS
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 QRSMGHRES 9
Q++ GHRES
Sbjct: 178 QKTTGHRES 186
>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 QRSMGHRES 9
Q++ GHRES
Sbjct: 178 QKTRGHRES 186
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 QRSMGHRES 9
Q++ GHRE+
Sbjct: 178 QKTRGHREN 186
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 5 GHRES 9
GHRES
Sbjct: 492 GHRES 496
>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 RSMGHRESS 10
R HRESS
Sbjct: 244 RVCDHRESS 252
>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 RSMGHRESS 10
R HRESS
Sbjct: 244 RVCDHRESS 252
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 1 QRSMGH 6
QRS GH
Sbjct: 346 QRSQGH 351
>sp|NSP1A_ROTGI|NON-STRUCTURAL protein 1, peptide 1|Rotavirus B (isolate RVB/Rat/United
Query: 4 MGHRESS 10
MG+R+SS
Sbjct: 1 MGNRQSS 7
106|Sequence|526|535|HRESSQPPVA
>sp|VPAP_HHV7J|DNA polymerase processivity factor|Human herpesvirus 7 (strain JI)
Query: 1 HRESSQPP 8
HR+S +PP
Sbjct: 17 HRDSKEPP 24
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 SSQPPVA 10
SS+PPV+
Sbjct: 43 SSEPPVS 49
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 1 HRESSQPP 8
+R+S QPP
Sbjct: 262 YRQSLQPP 269
>sp|CAP6_ADE41|PRE-PROTEIN VI|Human adenovirus F serotype 41
Query: 4 SSQPPVA 10
S QPPVA
Sbjct: 110 SRQPPVA 116
>sp|CAP6_ADE40|PRE-PROTEIN VI|Human adenovirus F serotype 40
Query: 4 SSQPPVA 10
S QPPVA
Sbjct: 110 SRQPPVA 116
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 1 HRESSQPP 8
H E S PP
Sbjct: 528 HNEMSLPP 535
107|Sequence|531|540|QPPVAFSSSI
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 PPVAFSSS 9
PPV+F S
Sbjct: 1097 PPVSFHGS 1104
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 PPVAFSSS 9
PPV+F S
Sbjct: 1097 PPVSFHGS 1104
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 PPVAFSSS 9
PPV+F S
Sbjct: 1097 PPVSFHGS 1104
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 PPVAFSSS 9
PPV+F S
Sbjct: 1097 PPVSFHGS 1104
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 PPVAFSSS 9
PPV+F S
Sbjct: 1097 PPVSFHGS 1104
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 2 PPVAFSSS 9
PPV+F S
Sbjct: 1097 PPVSFHGS 1104
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 PPVAFSSS 9
PPV+F S
Sbjct: 1097 PPVSFHGS 1104
>sp|PG172_VACCC|PROTEIN A43|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PPVAFSSSI 10
P +A+SSSI
Sbjct: 17 PVLAYSSSI 25
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 PPVAFSSS 9
PPV+F S
Sbjct: 1097 PPVSFHGS 1104
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 PPVAFSSS 9
PPV+F S
Sbjct: 1097 PPVSFHGS 1104
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 QPPVAFSSS 9
Q PV+F S+
Sbjct: 862 QKPVSFKSN 870
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 QPPVAFSSS 9
Q PV+F S+
Sbjct: 862 QKPVSFKSN 870
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 QPPVAFSSS 9
Q PV+F S+
Sbjct: 862 QKPVSFKSN 870
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 QPPVAFSSS 9
Q PV+F S+
Sbjct: 862 QKPVSFKSN 870
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 QPPVAFSSS 9
Q PV+F S+
Sbjct: 862 QKPVSFKSN 870
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 QPPVAFSSS 9
Q PV+F S+
Sbjct: 862 QKPVSFKSN 870
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 QPPVAFSSS 9
Q PV+F S+
Sbjct: 862 QKPVSFKSN 870
108|Sequence|536|545|FSSSIEKDVT
>sp|PG165_MONPV|PROTEIN OPG165|Monkeypox virus (MPXV)
Query: 1 FSSSIEKDV 9
+SSIE+D+
Sbjct: 213 INSSIEQDI 221
109|Sequence|541|550|EKDVTPDKNL
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 KDVTPDK 8
+D TPDK
Sbjct: 650 QDTTPDK 656
>sp|VIF_HV2UC|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 DVTPD 7
DVTPD
Sbjct: 99 DVTPD 103
>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 DVTPD 7
DVTPD
Sbjct: 99 DVTPD 103
>sp|VIF_HV2EH|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 DVTPD 7
DVTPD
Sbjct: 99 DVTPD 103
>sp|VIF_HV2D2|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 DVTPD 7
DVTPD
Sbjct: 99 DVTPD 103
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 EKDVTPDK 8
++DV PD+
Sbjct: 1596 DEDVVPDR 1603
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 EKDVTPDK 8
++DV PD+
Sbjct: 1596 DEDVVPDR 1603
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 EKDVTPDK 8
++DV PD+
Sbjct: 1596 DEDVVPDR 1603
>sp|NSS_PUUMS|NON-STRUCTURAL protein NS-S|Puumala virus (strain Sotkamo/V-2969/81)
Query: 6 PDKNL 10
PDKNL
Sbjct: 8 PDKNL 12
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 4 VTPDK 8
VTPDK
Sbjct: 660 VTPDK 664
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 EKDVTPDKNL 10
+K ++P KNL
Sbjct: 539 DKAISPPKNL 548
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 EKDVTPDKNL 10
+K ++P KNL
Sbjct: 539 DKAISPPKNL 548
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 KDVTPD 7
KDV PD
Sbjct: 629 KDVIPD 634
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 2 KDVTPD 7
KDV PD
Sbjct: 629 KDVIPD 634
>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 KDVTPDKN 9
KD PD N
Sbjct: 38 KDTWPDAN 45
>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 KDVTPDKN 9
KD PD N
Sbjct: 38 KDTWPDAN 45
>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 KDVTPDKN 9
KD PD N
Sbjct: 38 KDTWPDAN 45
>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 KDVTPDKN 9
KD PD N
Sbjct: 38 KDTWPDAN 45
>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 KDVTPDKN 9
KD PD N
Sbjct: 38 KDTWPDAN 45
>sp|HBSAG_HBVD1|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 KDVTPDKN 9
KD PD N
Sbjct: 38 KDTWPDAN 45
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 VTPDK 8
VTPDK
Sbjct: 983 VTPDK 987
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 KDVTPDKNL 10
+D+TPD L
Sbjct: 687 RDLTPDYAL 695
>sp|W_NIPAV|PROTEIN W|Nipah virus
Query: 1 EKDVTPDK 8
E+ ++PDK
Sbjct: 369 ERSISPDK 376
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 1 EKDVTPDK 8
E+ ++PDK
Sbjct: 369 ERSISPDK 376
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 1 EKDVTPDK 8
E+ ++PDK
Sbjct: 369 ERSISPDK 376
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 TPDKNL 10
TPDKN+
Sbjct: 489 TPDKNV 494
>sp|VIL6_HHV8P|VIRAL interleukin-6 homolog|Human herpesvirus 8 type P
Query: 3 DVTPD 7
DVTPD
Sbjct: 196 DVTPD 200
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 EKDVTPD 7
EK++ PD
Sbjct: 552 EKEIKPD 558
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 EKDVTPD 7
EK++ PD
Sbjct: 552 EKEIKPD 558
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 EKDVTPD 7
EK++ PD
Sbjct: 553 EKEIKPD 559
110|Sequence|546|555|PDKNLLTKVR
>sp|REV_HV196|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 1 PDKNLLTKVR 10
PD+ LLT VR
Sbjct: 8 PDEQLLTTVR 17
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 PDKNLLTK 8
PD+ L+T+
Sbjct: 501 PDRTLMTQ 508
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 DKNLLT 7
DKNL+T
Sbjct: 2559 DKNLIT 2564
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 DKNLLT 7
DKNL+T
Sbjct: 2559 DKNLIT 2564
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 460 KNLYEKVR 467
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 460 KNLYEKVR 467
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 460 KNLYEKVR 467
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 460 KNLYEKVR 467
>sp|UXP_ADE05|U exon protein|Human adenovirus C serotype 5
Query: 2 DKNLLTKVR 10
D+NLLT +
Sbjct: 47 DRNLLTDFK 55
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 456 KNLYDKVR 463
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 456 KNLYDKVR 463
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 456 KNLYDKVR 463
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 454 KNLYDKVR 461
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 456 KNLYDKVR 463
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 458 KNLYDKVR 465
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 462 KNLYDKVR 469
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 462 KNLYDKVR 469
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 4 NLLTKV 9
NLLTKV
Sbjct: 39 NLLTKV 44
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 462 KNLYDKVR 469
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 451 KNLYDKVR 458
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 461 KNLYDKVR 468
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 462 KNLYDKVR 469
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 462 KNLYDKVR 469
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 458 KNLYDKVR 465
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 462 KNLYDKVR 469
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 462 KNLYDKVR 469
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 462 KNLYDKVR 469
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 462 KNLYDKVR 469
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 451 KNLYDKVR 458
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 451 KNLYDKVR 458
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 451 KNLYDKVR 458
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 460 KNLYDKVR 467
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 KNLLTKVR 10
KNL KVR
Sbjct: 462 KNLYDKVR 469
111|Sequence|551|560|LTKVRDAALW
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TKVRDAALW 10
T++RD A W
Sbjct: 330 TQLRDLATW 338
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TKVRDAALW 10
T++RD A W
Sbjct: 324 TQLRDLATW 332
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 4 VRDAALW 10
++D +LW
Sbjct: 310 IKDTSLW 316
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 4 VRDAALW 10
++D +LW
Sbjct: 310 IKDTSLW 316
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 4 VRDAALW 10
++D +LW
Sbjct: 310 IKDTSLW 316
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 3 KVRDAALW 10
K+R AA W
Sbjct: 104 KIRKAANW 111
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 LTKVRDAALW 10
LT+ D +W
Sbjct: 948 LTRTEDKIVW 957
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 LTKVRDAALW 10
LT+ D +W
Sbjct: 948 LTRTEDRIVW 957
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 LTKVRDAALW 10
LT+ D +W
Sbjct: 948 LTRTEDRIVW 957
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 LTKVRDAALW 10
LT+ D +W
Sbjct: 948 LTRTEDRIVW 957
112|Sequence|556|565|DAALWLETLS
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 LWLETL 9
LWLETL
Sbjct: 1308 LWLETL 1313
Query: 5 WLETLS 10
WL+TLS
Sbjct: 2015 WLKTLS 2020
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 DAALWLETL 9
DAA WLE +
Sbjct: 1347 DAAEWLEMI 1355
>sp|TRM2_HHV2H|TRIPARTITE terminase subunit 2|Human herpesvirus 2 (strain HG52)
Query: 1 DAALWLETLS 10
DAA+W E ++
Sbjct: 42 DAAVWFEDMT 51
>sp|TRM2_HHV11|TRIPARTITE terminase subunit 2|Human herpesvirus 1 (strain 17)
Query: 1 DAALWLETLS 10
DAA+W E ++
Sbjct: 42 DAAVWFEDMT 51
>sp|UL148_HCMVM|MEMBRANE protein UL148|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 ALWLETLS 10
AL+LETLS
Sbjct: 151 ALYLETLS 158
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 3 ALWLET 8
ALWL+T
Sbjct: 2 ALWLQT 7
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 4 LWLETLS 10
LWL+T S
Sbjct: 224 LWLQTFS 230
>sp|LRP1_HHV1F|LATENCY-RELATED protein 1|Human herpesvirus 1 (strain F)
Query: 2 AALWL 6
AALWL
Sbjct: 13 AALWL 17
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 4 LWLETLS 10
LWLET S
Sbjct: 2017 LWLETES 2023
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 4 LWLETLS 10
LWLET S
Sbjct: 2022 LWLETES 2028
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 LWLETLS 10
LWLET S
Sbjct: 2044 LWLETES 2050
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 3 ALWLET 8
A WLET
Sbjct: 315 ARWLET 320
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 5 WLETLS 10
W++TLS
Sbjct: 967 WIKTLS 972
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 ALWLETLS 10
+ WL+T+S
Sbjct: 1587 SYWLKTMS 1594
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 ALWLETLS 10
+ WL+T+S
Sbjct: 1588 SYWLKTMS 1595
113|Sequence|561|570|LETLSDSRPA
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 LETLSDSRPA 10
LET++ RPA
Sbjct: 330 LETVAIDRPA 339
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 TLSDSRP 9
TLS SRP
Sbjct: 692 TLSASRP 698
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 ETLSDSRP 9
E LSD RP
Sbjct: 297 EGLSDPRP 304
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 ETLSDSRP 9
E SDSRP
Sbjct: 1499 EGRSDSRP 1506
>sp|HBSAG_HBVB6|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 1 LETLSDSR 8
L+TL DSR
Sbjct: 128 LQTLQDSR 135
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 LETLSDSRP 9
LETL RP
Sbjct: 482 LETLGARRP 490
114|Sequence|566|575|DSRPAKASLS
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 SRPAKASL 9
S+PAKA++
Sbjct: 1234 SKPAKAAI 1241
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 SRPAKASLS 10
+RPA ASLS
Sbjct: 2791 TRPAVASLS 2799
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 SRPAKASLS 10
+RPA ASLS
Sbjct: 2802 TRPAVASLS 2810
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 DSRPAKASL 9
+SRPA++ L
Sbjct: 3072 ESRPAESEL 3080
>sp|CAP6_ADE05|PRE-PROTEIN VI|Human adenovirus C serotype 5
Query: 2 SRPAKASL 9
+RP++ASL
Sbjct: 204 TRPSRASL 211
>sp|CAP6_ADE02|PRE-PROTEIN VI|Human adenovirus C serotype 2
Query: 2 SRPAKASL 9
+RP++ASL
Sbjct: 204 TRPSRASL 211
115|Sequence|571|580|KASLSTTSSI
***** No hits found ******
116|Sequence|576|585|TTSSIADFFL
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 SSIADFFL 10
SSIA FF
Sbjct: 463 SSIASFFF 470
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 SSIADFFL 10
SSIA FF
Sbjct: 463 SSIASFFF 470
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 SSIADFFL 10
SSIA FF
Sbjct: 463 SSIASFFF 470
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 SSIADFFL 10
SSIA FF
Sbjct: 463 SSIASFFF 470
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 SSIADFFL 10
SSIA FF
Sbjct: 463 SSIASFFF 470
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 3 SSIADFFL 10
SSIA FF
Sbjct: 463 SSIASFFF 470
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 SSIADFFL 10
SSIA FF
Sbjct: 463 SSIASFFF 470
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 TSSIADF 8
TSSIAD
Sbjct: 958 TSSIADL 964
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 TSSIADF 8
TSSIAD
Sbjct: 958 TSSIADL 964
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 TSSIADF 8
TSSIAD
Sbjct: 958 TSSIADL 964
117|Sequence|581|590|ADFFLALTIC
>sp|YVEF_VACCC|UNCHARACTERIZED 12.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 FFLALTIC 10
FFLAL+IC
Sbjct: 65 FFLALSIC 72
>sp|UL117_HCMVM|PROTEIN UL117|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DFFLALTIC 10
D F A+T+C
Sbjct: 375 DLFDAVTLC 383
>sp|UL117_HCMVA|PROTEIN UL117|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DFFLALTIC 10
D F A+T+C
Sbjct: 374 DLFDAVTLC 382
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 4 FLALTIC 10
FL+LT C
Sbjct: 176 FLSLTFC 182
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 4 FLALTIC 10
FL+LT C
Sbjct: 176 FLSLTFC 182
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 4 FLALTIC 10
FL++T+C
Sbjct: 174 FLSVTVC 180
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 4 FLALTIC 10
FL++T+C
Sbjct: 174 FLSVTVC 180
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 4 FLALTIC 10
FL++T+C
Sbjct: 174 FLSVTVC 180
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 4 FLALTIC 10
FL++T+C
Sbjct: 174 FLSVTVC 180
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 4 FLALTIC 10
FL++T+C
Sbjct: 174 FLSVTVC 180
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 FFLALTIC 10
FF L+IC
Sbjct: 887 FFPGLSIC 894
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 2 DFFLALT 8
+F+LALT
Sbjct: 286 NFYLALT 292
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 2 DFFLALT 8
+F+LALT
Sbjct: 286 NFYLALT 292
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 2 DFFLALTIC 10
DF +A IC
Sbjct: 1467 DFVMASKIC 1475
118|Sequence|586|595|ALTICNSVMV
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 1 ALTICNSV 8
+L ICNSV
Sbjct: 236 SLLICNSV 243
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 2 LTICNSV 8
L ICNS+
Sbjct: 223 LDICNSI 229
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 3 TICNSV 8
T CNSV
Sbjct: 667 TTCNSV 672
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 3 TICNSV 8
T CNSV
Sbjct: 667 TTCNSV 672
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 LTICNSVMV 10
LTICN V
Sbjct: 409 LTICNGTSV 417
119|Sequence|591|600|NSVMVSTTTE
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 1 NSVMVSTTT 9
NSVM +TT
Sbjct: 475 NSVMAPSTT 483
120|Sequence|596|605|STTTEPRQRV
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 STTTEPRQRV 10
+T TEP +RV
Sbjct: 955 ATRTEPAERV 964
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 STTTEPRQRV 10
+T TEP +RV
Sbjct: 955 ATRTEPAERV 964
>sp|VPX_HV2BE|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 4 TEPRQRV 10
T+PR+RV
Sbjct: 2 TDPRERV 8
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 1 STTTEPRQRV 10
STT +P+ +V
Sbjct: 500 STTPQPKSKV 509
>sp|VPX_HV2G1|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 4 TEPRQRV 10
T+PR+RV
Sbjct: 2 TDPRERV 8
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 STTTEP 6
+TTTEP
Sbjct: 5434 NTTTEP 5439
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TTTEPRQRV 10
TTEPR V
Sbjct: 187 ATTEPRYHV 195
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TTTEPRQRV 10
TTEPR V
Sbjct: 187 ATTEPRYHV 195
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 STTTEPRQRV 10
+T TEP +RV
Sbjct: 955 ATRTEPVERV 964
121|Sequence|601|610|PRQRVTIKPS
>sp|UL107_HCMVA|UNCHARACTERIZED protein UL107|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PRQRVTIKPS 10
PR R T KPS
Sbjct: 76 PRTRSTTKPS 85
>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus
Query: 5 VTIKPS 10
VTIKPS
Sbjct: 85 VTIKPS 90
>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 VTIKPS 10
VTIKPS
Sbjct: 85 VTIKPS 90
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 QRVTIKPS 10
+RV IKPS
Sbjct: 496 ERVKIKPS 503
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 QRVTIKP 9
Q VT+KP
Sbjct: 1093 QSVTVKP 1099
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 QRVTIKP 9
Q VT+KP
Sbjct: 1093 QSVTVKP 1099
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RQRVTIKP 9
R+RVT+ P
Sbjct: 315 RKRVTLGP 322
>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8
Query: 1 PRQRVTIKPS 10
P Q VTIK +
Sbjct: 314 PHQPVTIKTT 323
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 QRVTIKPS 10
Q VTI PS
Sbjct: 31 QNVTINPS 38
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 QRVTIKPS 10
QR+ KPS
Sbjct: 230 QRIDAKPS 237
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 RQRVTIKP 9
R+R T++P
Sbjct: 462 RERFTVRP 469
122|Sequence|606|615|TIKPSSKALG
>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus
Query: 1 TIKPSS 6
TIKPSS
Sbjct: 86 TIKPSS 91
>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 TIKPSS 6
TIKPSS
Sbjct: 86 TIKPSS 91
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 IKPSSKALG 10
+ P S+ALG
Sbjct: 109 VAPQSEALG 117
123|Sequence|611|620|SKALGTSLEK
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SKALGTSLEK 10
S LGT++EK
Sbjct: 614 SNLLGTTVEK 623
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 KALGTSLE 9
+ LGTSLE
Sbjct: 847 EVLGTSLE 854
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 KALGTSLE 9
+ LGTSLE
Sbjct: 847 EVLGTSLE 854
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 SKALGTSLEK 10
S LGT++EK
Sbjct: 614 SNLLGTTVEK 623
124|Sequence|616|625|TSLEKIQQLF
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 KIQQLF 10
K+QQLF
Sbjct: 6267 KVQQLF 6272
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SLEKIQQLF 10
++ K+QQ+F
Sbjct: 396 AINKLQQIF 404
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 SLEKIQQLF 10
++ K+QQ+F
Sbjct: 396 AINKLQQIF 404
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SLEKIQQLF 10
++ K+QQ+F
Sbjct: 396 AINKLQQIF 404
125|Sequence|621|630|IQQLFQKLKL
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 IQQLFQKL 8
+QQLF K
Sbjct: 1044 LQQLFNKF 1051
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 IQQLFQKL 8
+QQLF K
Sbjct: 1044 LQQLFNKF 1051
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 IQQLFQKL 8
+QQLF K
Sbjct: 1048 LQQLFNKF 1055
126|Sequence|626|635|QKLKLLSLSQ
***** No hits found ******
127|Sequence|631|640|LSLSQSFSST
>sp|UL09_HCMVM|MEMBRANE glycoprotein UL9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LSLSQSFSST 10
L +SQSF+ST
Sbjct: 159 LEISQSFTST 168
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 SLSQSFSS 9
SLS+ FSS
Sbjct: 1277 SLSRKFSS 1284
128|Sequence|636|645|SFSSTAPSDT
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 FSSTAPSDT 10
F T PSDT
Sbjct: 2654 FKPTEPSDT 2662
>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)
Query: 1 SFSSTAPSD 9
+FSS+AP D
Sbjct: 80 TFSSSAPPD 88
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SFSSTAP 7
SFSS AP
Sbjct: 429 SFSSVAP 435
129|Sequence|641|650|APSDTDLGES
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 PSDTDLGES 10
P+D DLGES
Sbjct: 428 PNDIDLGES 436
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 2 PSDTDLGES 10
P D DLGES
Sbjct: 296 PHDIDLGES 304
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 PSDTDLGES 10
P D DLGES
Sbjct: 428 PHDIDLGES 436
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 PSDTDLGES 10
P D DLGES
Sbjct: 428 PHDIDLGES 436
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 PSDTDLGES 10
P D DLGES
Sbjct: 428 PHDIDLGES 436
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 PSDTDLGES 10
P D DLGES
Sbjct: 428 PHDIDLGES 436
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 2 PSDTDLGES 10
P D DLGES
Sbjct: 426 PHDIDLGES 434
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 2 PSDTDLGES 10
PSD D GE+
Sbjct: 764 PSDEDEGEN 772
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 2 PSDTDLGES 10
P D DLG+S
Sbjct: 427 PHDIDLGDS 435
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 PSDTDLGES 10
P D DLG+S
Sbjct: 428 PHDIDLGDS 436
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 PSDTDLGES 10
P D DLG+S
Sbjct: 428 PHDIDLGDS 436
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PSDTDLGES 10
P D+ LG+S
Sbjct: 2021 PKDSRLGDS 2029
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 PSDTDLGES 10
PS D+GE+
Sbjct: 706 PSSQDIGET 714
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 APSDTDLGE 9
APS+ D+G+
Sbjct: 1560 APSEMDVGD 1568
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PSDTDLGES 10
P D+ LG+S
Sbjct: 2021 PKDSRLGDS 2029
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 APSDTDLGE 9
APS+ D+G+
Sbjct: 1561 APSEMDVGD 1569
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 PSDTDLGE 9
PS+TD+ E
Sbjct: 232 PSNTDVSE 239
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 2 PSDTDLGES 10
PSD D GE+
Sbjct: 764 PSDEDEGEN 772
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 3 SDTDLGE 9
SD D+GE
Sbjct: 151 SDVDIGE 157
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 3 SDTDLGE 9
SD D+GE
Sbjct: 151 SDVDIGE 157
130|Sequence|646|655|DLGESLGANV
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 3 GESLGANV 10
GE+ G NV
Sbjct: 232 GETFGTNV 239
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 DLGESLGAN 9
D+G S+G N
Sbjct: 732 DVGNSVGDN 740
>sp|PG068_VARV|PROTEIN OPG068|Variola virus
Query: 1 DLGESLGAN 9
+LGE +G N
Sbjct: 128 ELGELIGVN 136
>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DLGESLGAN 9
+LGE +G N
Sbjct: 128 ELGELIGVN 136
>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DLGESLGAN 9
+LGE +G N
Sbjct: 128 ELGELIGVN 136
>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)
Query: 1 DLGESLGAN 9
+LGE +G N
Sbjct: 128 ELGELIGVN 136
>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)
Query: 1 DLGESLGANV 10
D+G SLG+ +
Sbjct: 458 DVGTSLGSAI 467
>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16
Query: 3 GESLGANV 10
G+S+GA V
Sbjct: 317 GKSIGAKV 324
131|Sequence|651|660|LGANVATTDS
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 LGANVATTDS 10
G+NVAT +S
Sbjct: 560 FGSNVATINS 569
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 GANVATTDS 10
GAN+ TD+
Sbjct: 741 GANIIGTDN 749
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GANVATTDS 10
GAN+ TD+
Sbjct: 730 GANIIGTDN 738
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GANVATTDS 10
GAN+ TD+
Sbjct: 730 GANILGTDN 738
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GANVATTDS 10
GAN+ TD+
Sbjct: 730 GANILGTDN 738
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GANVATTDS 10
GAN+ TD+
Sbjct: 730 GANILGTDN 738
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GANVATTDS 10
GAN+ TD+
Sbjct: 730 GANILGTDN 738
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GANVATTDS 10
GAN+ TD+
Sbjct: 730 GANILGTDN 738
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GANVATTDS 10
GAN+ TD+
Sbjct: 730 GANILGTDN 738
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GANVATTDS 10
GAN+ TD+
Sbjct: 741 GANILGTDN 749
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GANVATTDS 10
GAN+ TD+
Sbjct: 741 GANILGTDN 749
132|Sequence|656|665|ATTDSDERDD
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 TTDSDER 8
TTD+DER
Sbjct: 83 TTDADER 89
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 TTDSDER 8
TTD+DER
Sbjct: 83 TTDADER 89
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 1 ATTDSDERDD 10
A D+D RD+
Sbjct: 135 ANADTDNRDN 144
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 2 TTDSDERDD 10
TTDS E DD
Sbjct: 537 TTDSQESDD 545
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 1 ATTDSDERDD 10
+TT+ D RD+
Sbjct: 136 STTNKDSRDN 145
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 TTDSDE 7
TTDS+E
Sbjct: 396 TTDSEE 401
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 TTDSDE 7
TTDS+E
Sbjct: 396 TTDSEE 401
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 TTDSDE 7
TTDS+E
Sbjct: 396 TTDSEE 401
133|Sequence|661|670|DERDDASVCS
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 ERDDASVC 9
E DD +VC
Sbjct: 2434 EEDDTTVC 2441
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 1 DERDDASVCS 10
+ER +A+ CS
Sbjct: 370 NERGNATACS 379
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DERDDASVCS 10
+ER +A+ CS
Sbjct: 371 NERGNATACS 380
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 ERDDASVC 9
E DD+ VC
Sbjct: 2434 EEDDSVVC 2441
>sp|LAP_YMTV5|E3 ubiquitin-protein ligase LAP|Yaba monkey tumor virus (strain
Query: 1 DERDDASVCS 10
DER++ +CS
Sbjct: 13 DERNNFCICS 22
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 ERDDASVCS 10
E DD CS
Sbjct: 2421 EEDDVVCCS 2429
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 DDASVC 9
DDA VC
Sbjct: 5152 DDAVVC 5157
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 DDASVC 9
DDA VC
Sbjct: 5129 DDAVVC 5134
>sp|NSP3_ROTJ1|NON-STRUCTURAL protein 3|Rotavirus X (strain
Query: 2 ERDDASVC 9
+RD+A +C
Sbjct: 196 QRDEAQIC 203
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 1 DERDDASV 8
DE DDA V
Sbjct: 173 DEEDDAGV 180
134|Sequence|666|675|ASVCSGGDST
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 VCSGGD 8
VCSGGD
Sbjct: 379 VCSGGD 384
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 VCSGGD 8
VCSGGD
Sbjct: 379 VCSGGD 384
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 3 VCSGGD 8
+CSGGD
Sbjct: 378 ICSGGD 383
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 SVCSGGDST 10
+VC GD+T
Sbjct: 2440 TVCISGDNT 2448
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 1 ASVCSGGDS 9
+VCSGG +
Sbjct: 157 GNVCSGGST 165
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 CSGGDST 10
CS GD+T
Sbjct: 1517 CSKGDTT 1523
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 CSGGDST 10
CS GD+T
Sbjct: 1517 CSKGDTT 1523
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 CSGGDST 10
CS GD+T
Sbjct: 1517 CSKGDTT 1523
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 VCSGGD 8
+C+GGD
Sbjct: 379 LCTGGD 384
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGGD 8
ASV SGG+
Sbjct: 5 ASVLSGGE 12
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 VCSGG 7
VCSGG
Sbjct: 379 VCSGG 383
>sp|ORF24_TTVV4|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 4 CSGGDS 9
C GGD+
Sbjct: 86 CGGGDA 91
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 VCSGG 7
VCSGG
Sbjct: 379 VCSGG 383
>sp|ORF24_TTVV7|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 ASVCSGGD 8
A+VC GD
Sbjct: 27 AAVCGCGD 34
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 2 SVCSGGDST 10
++C+GG ST
Sbjct: 382 ALCTGGVST 390
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ASVCSGG 7
ASV SGG
Sbjct: 5 ASVLSGG 11
135|Sequence|671|680|GGDSTDDGGY
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 1 GGDSTDDGG 9
GG+S D GG
Sbjct: 135 GGNSQDGGG 143
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 GGDSTD 6
GGDSTD
Sbjct: 1623 GGDSTD 1628
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 GGDSTD 6
GGDSTD
Sbjct: 1623 GGDSTD 1628
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 DSTDDGGY 10
D++DDG Y
Sbjct: 2378 DASDDGSY 2385
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GDSTDDGG 9
GD D+GG
Sbjct: 284 GDGRDNGG 291
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 TDDGGY 10
TDDG Y
Sbjct: 2006 TDDGNY 2011
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 2 GDSTDDGGY 10
GDS D GY
Sbjct: 270 GDSLPDSGY 278
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GGDSTDD 7
GGDS+D+
Sbjct: 473 GGDSSDE 479
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GGDSTDD 7
GGDS+D+
Sbjct: 473 GGDSSDE 479
>sp|SPIKE_ADE15|FIBER protein|Human adenovirus D serotype 15
Query: 1 GGDSTDDGG 9
G D+TD+GG
Sbjct: 142 GTDTTDNGG 150
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 2 GDSTDDGGY 10
GD DGG+
Sbjct: 192 GDRLRDGGF 200
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 1 GGDSTDDG 8
GGDS+D+
Sbjct: 168 GGDSSDNA 175
>sp|SPIKE_ADE1H|FIBER protein|Human adenovirus D serotype 15/H9
Query: 1 GGDSTDDGG 9
G +STD+GG
Sbjct: 142 GTESTDNGG 150
>sp|SPIKE_ADE09|FIBER protein|Human adenovirus D serotype 9
Query: 1 GGDSTDDGG 9
G +STD+GG
Sbjct: 142 GTESTDNGG 150
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 1 GGDSTDD 7
GGD+T D
Sbjct: 315 GGDATSD 321
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 STDDGGY 10
++DDG Y
Sbjct: 2383 ASDDGSY 2389
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 2 GDSTDD 7
G+STDD
Sbjct: 138 GNSTDD 143
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GGDSTDDG 8
GG TD G
Sbjct: 2634 GGGETDQG 2641
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 GGDSTDDG 8
GG TD G
Sbjct: 2607 GGGETDQG 2614
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 GGDSTDDG 8
GG TD G
Sbjct: 2612 GGGETDQG 2619
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 2 GDSTDD 7
G+STDD
Sbjct: 138 GNSTDD 143
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DSTDDGGY 10
++ DDG Y
Sbjct: 93 ETDDDGNY 100
>sp|UL136_HCMVM|PROTEIN UL136|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GGDSTDD 7
G DS DD
Sbjct: 177 GDDSNDD 183
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 3 DSTDDGGY 10
++ DDG Y
Sbjct: 63 ETDDDGNY 70
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 GGDSTDD 7
GG ST D
Sbjct: 1695 GGSSTSD 1701
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 DSTDDGGY 10
++ DDG Y
Sbjct: 67 ETDDDGNY 74
136|Sequence|676|685|DDGGYRSSMW
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 DDGGYRSSMW 10
+DG YRS W
Sbjct: 743 NDGDYRSWPW 752
>sp|US07_HCMVA|UNIQUE short US7 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 DGGYRSSMW 10
DGG +S+W
Sbjct: 66 DGGNMTSVW 74
>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DGGYRSSMW 10
DGG +S+W
Sbjct: 66 DGGNMTSVW 74
>sp|DUT_HHV8P|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 8 type P
Query: 2 DGGYRSSM 9
DGGYR +
Sbjct: 81 DGGYRGEI 88
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 DDGGYRSSMW 10
D+ GY + W
Sbjct: 574 DNSGYSQTTW 583
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 DDGGYRSSMW 10
D+ GY + W
Sbjct: 574 DNSGYSQTTW 583
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 DDGGYRSSMW 10
D+ GY + W
Sbjct: 574 DNSGYSQTTW 583
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 DGGYRSSMW 10
DG Y +S W
Sbjct: 419 DGFYNNSKW 427
>sp|K1_HHV8P|PROTEIN K1|Human herpesvirus 8 type P
Query: 4 GYRSSMW 10
G+R S+W
Sbjct: 81 GHRYSLW 87
>sp|UL79_HHV8P|PROTEIN UL79 homolog|Human herpesvirus 8 type P
Query: 4 GYRSSMW 10
YR S+W
Sbjct: 102 AYRDSLW 108
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 3 GGYRSSMW 10
GGY S+W
Sbjct: 113 GGYDVSVW 120
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 3 GGYRSSMW 10
GG SS+W
Sbjct: 408 GGLYSSIW 415
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 DDGGYRSSM 9
DD YRS++
Sbjct: 79 DDSDYRSAL 87
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 3 GGYRSSMW 10
GG SS+W
Sbjct: 408 GGLYSSIW 415
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 3 GGYRSSMW 10
GG SS+W
Sbjct: 408 GGLYSSIW 415
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 3 GGYRSSMW 10
GG SS+W
Sbjct: 408 GGLYSSIW 415
137|Sequence|681|690|RSSMWDQGDI
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 RSSMWDQGDI 10
RS W +GDI
Sbjct: 435 RSIFWKEGDI 444
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 RSSMWDQGDI 10
RS +W +GD+
Sbjct: 435 RSILWREGDM 444
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 RSSMWDQGDI 10
RS +W +GD+
Sbjct: 435 RSILWREGDM 444
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 RSSMWDQGDI 10
RS +W +GD+
Sbjct: 435 RSILWREGDM 444
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SMWDQG 8
S+WDQG
Sbjct: 109 SLWDQG 114
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 RSSMWDQGDI 10
+S+ WDQ I
Sbjct: 703 QSTQWDQAAI 712
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 RSSMWDQGDI 10
+S+ WDQ I
Sbjct: 703 QSTQWDQAAI 712
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 RSSMWDQGDI 10
+S+ WDQ I
Sbjct: 703 QSTQWDQAAI 712
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 RSSMWDQGDI 10
+S+ WDQ I
Sbjct: 703 QSTQWDQAAI 712
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 RSSMWDQGDI 10
+S+ WDQ I
Sbjct: 703 QSTQWDQAAI 712
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 RSSMWDQGDI 10
+S+ WDQ I
Sbjct: 703 QSTQWDQAAI 712
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 RSSMWDQGDI 10
+S+ WDQ I
Sbjct: 703 QSTQWDQAAI 712
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 SSMWDQGD 9
S++W+ GD
Sbjct: 532 STVWEDGD 539
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 RSSMWDQGDI 10
+S+ WDQ +
Sbjct: 703 QSTQWDQAAV 712
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 RSSMWDQGDI 10
+S+ WDQ +
Sbjct: 703 QSTQWDQAAV 712
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 RSSMWDQGDI 10
+S+ WDQ +
Sbjct: 703 QSTQWDQAAV 712
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 RSSMWDQGDI 10
+S+ WDQ +
Sbjct: 703 QSTQWDQAAV 712
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 RSSMWDQGDI 10
+S+ WDQ +
Sbjct: 703 QSTQWDQAAV 712
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 1 RSSMWDQGDI 10
+S+ WDQ +
Sbjct: 703 QSTQWDQAAV 712
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 RSSMWDQGDI 10
R+ +W +GD+
Sbjct: 435 RNILWREGDM 444
>sp|MC132_MCV1|PROTEIN MC132|Molluscum contagiosum virus subtype 1
Query: 2 SSMWDQGDI 10
S +W+QG++
Sbjct: 132 SHLWEQGNL 140
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 3 SMWDQ 7
S+WDQ
Sbjct: 109 SLWDQ 113
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 3 SMWDQ 7
S+WDQ
Sbjct: 109 SLWDQ 113
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 4 MWDQGDI 10
MW +GD+
Sbjct: 320 MWLKGDV 326
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SMWDQ 7
S+WDQ
Sbjct: 110 SLWDQ 114
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SMWDQ 7
S+WDQ
Sbjct: 109 SLWDQ 113
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 SMWDQGDI 10
++WD G I
Sbjct: 2482 TLWDNGAI 2489
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SMWDQ 7
S+WDQ
Sbjct: 109 SLWDQ 113
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SMWDQ 7
S+WDQ
Sbjct: 109 SLWDQ 113
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SMWDQ 7
S+WDQ
Sbjct: 109 SLWDQ 113
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SMWDQ 7
S+WDQ
Sbjct: 109 SLWDQ 113
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SMWDQ 7
S+WDQ
Sbjct: 115 SLWDQ 119
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SMWDQ 7
S+WDQ
Sbjct: 109 SLWDQ 113
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SMWDQ 7
S+WDQ
Sbjct: 109 SLWDQ 113
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SMWDQ 7
S+WDQ
Sbjct: 110 SLWDQ 114
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SMWDQ 7
S+WDQ
Sbjct: 109 SLWDQ 113
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SMWDQ 7
S+WDQ
Sbjct: 109 SLWDQ 113
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SMWDQ 7
S+WDQ
Sbjct: 109 SLWDQ 113
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 5 WDQGD 9
WD GD
Sbjct: 299 WDHGD 303
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SMWDQ 7
S+WDQ
Sbjct: 109 SLWDQ 113
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SMWDQ 7
S+WDQ
Sbjct: 111 SLWDQ 115
138|Sequence|686|695|DQGDILESGS
>sp|V_MUMP1|NON-STRUCTURAL protein V|Mumps virus (strain SBL-1) (MuV)
Query: 1 DQGDILESG 9
+ GD++E+G
Sbjct: 9 ETGDLIETG 17
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 1 DQGDILESG 9
+ GD++E+G
Sbjct: 302 EDGDMVETG 310
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 1 DQGDILESG 9
+ GD++E+G
Sbjct: 209 EDGDMVETG 217
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 1 DQGDILESG 9
+ GD++E+G
Sbjct: 208 EDGDMVETG 216
>sp|V_MUMPS|NON-STRUCTURAL protein V|Mumps virus (strain SBL) (MuV)
Query: 1 DQGDILESG 9
+ GD++E+G
Sbjct: 9 ETGDLIETG 17
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 4 DILESGS 10
DI++SGS
Sbjct: 52 DIIDSGS 58
>sp|V_MUMPJ|NON-STRUCTURAL protein V|Mumps virus genotype A (strain
Query: 1 DQGDILESG 9
+ GD++E+G
Sbjct: 9 ETGDLIETG 17
>sp|V_MUMPE|NON-STRUCTURAL protein V|Mumps virus (strain Enders) (MuV)
Query: 1 DQGDILESG 9
+ GD++E+G
Sbjct: 9 ETGDLIETG 17
>sp|PHOSP_MUMPS|PHOSPHOPROTEIN virus (strain SBL) (MuV)
Query: 1 DQGDILESG 9
+ GD++E+G
Sbjct: 9 ETGDLIETG 17
>sp|PHOSP_MUMPE|PHOSPHOPROTEIN virus (strain Enders) (MuV)
Query: 1 DQGDILESG 9
+ GD++E+G
Sbjct: 9 ETGDLIETG 17
>sp|V_MUMPZ|NON-STRUCTURAL protein V|Mumps virus genotype N (strain
Query: 1 DQGDILESG 9
+ GD++E+G
Sbjct: 9 ETGDLIETG 17
>sp|PHOSP_MUMPJ|PHOSPHOPROTEIN virus genotype A (strain
Query: 1 DQGDILESG 9
+ GD++E+G
Sbjct: 9 ETGDLIETG 17
139|Sequence|691|700|LESGSGTSLE
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 1 LESGSGTSLE 10
+E+G+GT +E
Sbjct: 142 VEAGTGTQVE 151
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 1 LESGSGTSLE 10
+E+G+GT +E
Sbjct: 142 VEAGTGTQVE 151
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 LESGSGTSLE 10
++SG G S+E
Sbjct: 1743 IDSGEGLSME 1752
>sp|GI_VZVO|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Oka vaccine)
Query: 4 GSGTSL 9
GSGTSL
Sbjct: 208 GSGTSL 213
>sp|GI_VZVD|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 GSGTSL 9
GSGTSL
Sbjct: 208 GSGTSL 213
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 4 GSGTSLE 10
G GTSLE
Sbjct: 472 GKGTSLE 478
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SGSGTSL 9
SG+GT+L
Sbjct: 435 SGTGTTL 441
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SGSGTSL 9
SG+GT+L
Sbjct: 435 SGTGTTL 441
140|Sequence|696|705|GTSLEEALEA
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 1 GTSLEEAL 8
GTSLE+ L
Sbjct: 474 GTSLEDVL 481
>sp|C_PI3H4|PROTEIN C|Human parainfluenza 3 virus (strain
Query: 3 SLEEALEA 10
SLEE+LEA
Sbjct: 120 SLEESLEA 127
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 GTSLEEA 7
GTS+EE+
Sbjct: 1011 GTSVEES 1017
141|Sequence|701|710|EALEAPATDL
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 1 EALEAPATDL 10
+ LE PATD+
Sbjct: 130 QTLEVPATDV 139
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 4 EAPATDL 10
E+PA+DL
Sbjct: 92 ESPASDL 98
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 LEAPATD 9
+E PATD
Sbjct: 381 IEGPATD 387
>sp|GPX_MCV1|GLUTATHIONE peroxidase|Molluscum contagiosum virus subtype 1
Query: 1 EALEAPATDL 10
EAL AP+ D+
Sbjct: 146 EALPAPSDDM 155
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 4 EAPATDL 10
E P+TDL
Sbjct: 224 EMPSTDL 230
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 EALEAPATD 9
EA+EA AT+
Sbjct: 1025 EAIEALATE 1033
>sp|CVC1_HHV8P|CAPSID vertex component 1|Human herpesvirus 8 type P
Query: 2 ALEAPAT 8
ALEAP T
Sbjct: 191 ALEAPGT 197
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 ALEAPATDL 10
A +AP TDL
Sbjct: 2619 AADAPQTDL 2627
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 ALEAPATDL 10
A +AP TDL
Sbjct: 2619 AADAPQTDL 2627
142|Sequence|706|715|PATDLARPEF
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 3 TDLARPEF 10
TD+ RP F
Sbjct: 765 TDVDRPSF 772
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PATDLA 6
PATDLA
Sbjct: 322 PATDLA 327
143|Sequence|711|720|ARPEFCYEAE
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 EFCYEA 9
E+CYEA
Sbjct: 346 EYCYEA 351
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 2 RPEFCYEA 9
RP FC+EA
Sbjct: 457 RPFFCFEA 464
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ARPEFC 6
++PEFC
Sbjct: 2661 SKPEFC 2666
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ARPEFC 6
++PEFC
Sbjct: 2661 SKPEFC 2666
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ARPEFC 6
++PEFC
Sbjct: 2661 SKPEFC 2666
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ARPEFC 6
++PEFC
Sbjct: 2661 SKPEFC 2666
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ARPEFC 6
++PEFC
Sbjct: 2661 SKPEFC 2666
>sp|DUT_VARV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus
Query: 3 PEFCY 7
P+FCY
Sbjct: 59 PKFCY 63
>sp|DUT_VAR67|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus (isolate
Query: 3 PEFCY 7
P+FCY
Sbjct: 59 PKFCY 63
>sp|DUT_MONPV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Monkeypox virus (MPXV)
Query: 3 PEFCY 7
P+FCY
Sbjct: 63 PKFCY 67
>sp|DUT_CWPXG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Cowpox virus (strain GRI-90 /
Query: 3 PEFCY 7
P+FCY
Sbjct: 59 PKFCY 63
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 RPEFC 6
+PEFC
Sbjct: 2699 KPEFC 2703
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 5 FCYEAE 10
+CY+AE
Sbjct: 42 YCYQAE 47
>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus
Query: 3 PEFCYEA 9
PE C+E
Sbjct: 500 PEICWEG 506
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 3 PEFCYEA 9
PEFC A
Sbjct: 110 PEFCRNA 116
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 PEFCYEA 9
PE C+E
Sbjct: 500 PEVCWEG 506
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 5 FCYEA 9
+CYEA
Sbjct: 349 YCYEA 353
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 5 FCYEA 9
+CYEA
Sbjct: 349 YCYEA 353
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 5 FCYEA 9
+CYEA
Sbjct: 349 YCYEA 353
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PEFCY 7
PE CY
Sbjct: 607 PELCY 611
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PEFCY 7
PE CY
Sbjct: 607 PELCY 611
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 RPEFCYEAE 10
RP CY E
Sbjct: 285 RPPTCYTRE 293
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 RPEFCYEAE 10
RP CY E
Sbjct: 285 RPPTCYTRE 293
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 2 RPEFCYEAE 10
RP CY E
Sbjct: 285 RPPTCYTRE 293
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 1 ARPEFCY 7
ARP CY
Sbjct: 576 ARPGTCY 582
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 3 PEFCYEAE 10
P FCY ++
Sbjct: 895 PGFCYMSQ 902
144|Sequence|716|725|CYEAESPDEA
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 CYEAESPD 8
C+EAE PD
Sbjct: 825 CWEAEYPD 832
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 EAESPDEA 10
EAE PD A
Sbjct: 1834 EAEIPDRA 1841
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 EAESPDEA 10
EAE PD A
Sbjct: 1834 EAEIPDRA 1841
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 CYEAESPD 8
C EA +PD
Sbjct: 941 CQEAGNPD 948
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 CYEAESPD 8
C EA +PD
Sbjct: 941 CQEAGNPD 948
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 CYEAESPD 8
C EA +PD
Sbjct: 941 CQEAGNPD 948
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 CYEAESPD 8
C EA +PD
Sbjct: 941 CQEAGNPD 948
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 CYEAESPD 8
C EA +PD
Sbjct: 941 CQEAGNPD 948
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 CYEAESPD 8
C EA +PD
Sbjct: 941 CQEAGNPD 948
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 CYEAESPD 8
C EA +PD
Sbjct: 941 CQEAGNPD 948
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 CYEAESPD 8
C EA +PD
Sbjct: 941 CQEAGNPD 948
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 1 CYEAESPD 8
C EA +PD
Sbjct: 942 CQEAGNPD 949
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 CYEAESPD 8
C EA +PD
Sbjct: 941 CQEAGNPD 948
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 1 CYEAESPD 8
C EA +PD
Sbjct: 941 CQEAGNPD 948
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 CYEAESPD 8
C EA +PD
Sbjct: 942 CQEAGNPD 949
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 CYEAESPD 8
CY + PD
Sbjct: 552 CYSIQGPD 559
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 CYEAESPD 8
C+E E PD
Sbjct: 825 CWEIEYPD 832
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 CYEAESPD 8
C+E E PD
Sbjct: 825 CWEIEYPD 832
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 97 CYPYDVPDYA 106
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 YEAESP 7
YEAE P
Sbjct: 6173 YEAERP 6178
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 EAESPDEA 10
EA+ PD+A
Sbjct: 1836 EAQVPDKA 1843
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 114 CYPYDVPDYA 123
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 97 CYPYDVPDYA 106
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 EAESPDEA 10
EAE+ DEA
Sbjct: 238 EAETEDEA 245
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 97 CYPYDVPDYA 106
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 97 CYPYDVPDYA 106
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 97 CYPYDVPDYA 106
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 113 CYPYDVPDYA 122
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 97 CYPYDVPDYA 106
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 YEAESP 7
YEAE P
Sbjct: 6198 YEAERP 6203
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 1 CYEAESPDEA 10
CY + PD A
Sbjct: 97 CYPYDVPDYA 106
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 EAESPDEA 10
EA+ PD+A
Sbjct: 1840 EAQIPDKA 1847
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 YEAESPDE 9
Y+A++P+E
Sbjct: 134 YQAKTPEE 141
>sp|VE7_HPV1|PROTEIN E7|Human papillomavirus type 1 (Human
Query: 1 CYEAESPDE 9
CYE PD+
Sbjct: 26 CYEEVPPDD 34
145|Sequence|721|730|SPDEAALVHA
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 PDEAALVHA 10
PD A L+HA
Sbjct: 971 PDRATLMHA 979
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 PDEAALVHA 10
PD A L+HA
Sbjct: 971 PDRATLMHA 979
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 PDEAALVHA 10
PD A L HA
Sbjct: 971 PDRATLTHA 979
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 PDEAALVHA 10
PD A L HA
Sbjct: 971 PDRATLTHA 979
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 PDEAALVHA 10
PD A L HA
Sbjct: 971 PDRATLTHA 979
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 PDEAALVHA 10
PD A L HA
Sbjct: 971 PDRATLTHA 979
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 PDEAALVHA 10
PD A L HA
Sbjct: 971 PDRATLTHA 979
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 PDEAALVHA 10
PD A L HA
Sbjct: 971 PDRATLTHA 979
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 PDEAALVHA 10
PD A L HA
Sbjct: 971 PDRATLTHA 979
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 PDEAAL 7
PDEAA+
Sbjct: 1625 PDEAAM 1630
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 SPDEAALVHA 10
SP++ A+VH+
Sbjct: 892 SPEQLAVVHS 901
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 PDEAALVH 9
PD AA++H
Sbjct: 790 PDIAAILH 797
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 PDEAALVHA 10
P+EA + HA
Sbjct: 160 PEEAEIYHA 168
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 SPDEAALVHA 10
+PD LVH
Sbjct: 1169 TPDPIELVHG 1178
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 SPDEAALVHA 10
+PD LVH
Sbjct: 1169 TPDPIELVHG 1178
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 SPDEAALVHA 10
+PD LVH
Sbjct: 1169 TPDPIELVHG 1178
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 1 SPDEAALVH 9
SPD+ VH
Sbjct: 288 SPDKKEAVH 296
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SPDEAALVH 9
SPD+ VH
Sbjct: 288 SPDKKEAVH 296
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SPDEAALVH 9
SPD+ VH
Sbjct: 288 SPDKKEAVH 296
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 SPDEAALVH 9
SPD+ VH
Sbjct: 288 SPDKKEAVH 296
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 1 SPDEAALVH 9
SPD+ VH
Sbjct: 288 SPDKKEAVH 296
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 SPDEAALVHA 10
SP++ ALV++
Sbjct: 765 SPNQLALVNS 774
146|Sequence|726|735|ALVHAAHAYS
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 ALVHAAH 7
A +HAAH
Sbjct: 1696 AWIHAAH 1702
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 ALVHAAH 7
A +HAAH
Sbjct: 1696 AWIHAAH 1702
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 ALVHAAH 7
A +HAAH
Sbjct: 1696 AWIHAAH 1702
>sp|PHOSP_PI4HA|PHOSPHOPROTEIN parainfluenza 4a virus (strain
Query: 3 VHAAH 7
+HAAH
Sbjct: 199 IHAAH 203
147|Sequence|731|740|AHAYSFTLVS
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 4 YSFTLVS 10
YS+T+VS
Sbjct: 1970 YSYTIVS 1976
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 2 HAYSF 6
HAYSF
Sbjct: 503 HAYSF 507
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 HAYSF 6
HAYSF
Sbjct: 503 HAYSF 507
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 AHAYSFTL 8
+H Y FTL
Sbjct: 586 SHNYDFTL 593
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 2 HAYSF 6
HAYSF
Sbjct: 503 HAYSF 507
148|Sequence|736|745|FTLVSRTPEQ
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 FTLVSRTPEQ 10
T+V++ PE+
Sbjct: 569 LTIVNKMPEE 578
149|Sequence|741|750|RTPEQVTVRL
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1536 TPSETTVRL 1544
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1529 TPSETTVRL 1537
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1532 TPAETTVRL 1540
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1531 TPAETTVRL 1539
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1535 TPAETTVRL 1543
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1535 TPAETTVRL 1543
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1535 TPAETTVRL 1543
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1532 TPAETTVRL 1540
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1535 TPAETTVRL 1543
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 RTPEQVTV 8
+TPE +T+
Sbjct: 1891 KTPENITI 1898
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 RTPEQVTV 8
+TPE +T+
Sbjct: 1891 KTPENITI 1898
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1533 TPSETTVRL 1541
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1536 TPSETTVRL 1544
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1535 TPSETTVRL 1543
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1531 TPAETTVRL 1539
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1535 TPAETTVRL 1543
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1535 TPAETTVRL 1543
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1531 TPAETTVRL 1539
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1532 TPAETTVRL 1540
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1531 TPAETTVRL 1539
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1536 TPAETTVRL 1544
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1531 TPAETTVRL 1539
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1531 TPAETTVRL 1539
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 TPEQVTVRL 10
TP + TVRL
Sbjct: 1535 TPAETTVRL 1543
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 TPEQVTV 8
PEQ+TV
Sbjct: 1027 NPEQITV 1033
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 2 TPEQVT 7
TPE+VT
Sbjct: 141 TPEEVT 146
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 TPEQVTV 8
PEQ+TV
Sbjct: 1024 NPEQITV 1030
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 TPEQVTV 8
PEQ+TV
Sbjct: 1028 NPEQITV 1034
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 PEQVTV 8
PEQ+TV
Sbjct: 1615 PEQITV 1620
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 PEQVTV 8
PEQ+TV
Sbjct: 1615 PEQITV 1620
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 PEQVTV 8
PEQ+TV
Sbjct: 1615 PEQITV 1620
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 PEQVTV 8
PEQ+TV
Sbjct: 1615 PEQITV 1620
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 2 TPEQVT 7
TPE+VT
Sbjct: 141 TPEEVT 146
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 2 TPEQVT 7
TPE+VT
Sbjct: 141 TPEEVT 146
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 PEQVTVRL 10
PE V VRL
Sbjct: 799 PEAVQVRL 806
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TPEQVTVRL 10
TP + +VRL
Sbjct: 1531 TPAETSVRL 1539
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TPEQVTVRL 10
TP + +VRL
Sbjct: 1531 TPAETSVRL 1539
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TPEQVTVRL 10
TP + +VRL
Sbjct: 1531 TPAETSVRL 1539
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TPEQVTVRL 10
TP + +VRL
Sbjct: 1531 TPAETSVRL 1539
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TPEQVTVRL 10
TP + +VRL
Sbjct: 1531 TPAETSVRL 1539
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TPEQVTVRL 10
TP + +VRL
Sbjct: 1531 TPAETSVRL 1539
150|Sequence|746|755|VTVRLPQGTC
>sp|NCAP_SARS2|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 1 VTVRLPQGT 9
+ ++LPQGT
Sbjct: 157 IVLQLPQGT 165
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 5 LPQGTC 10
+PQG+C
Sbjct: 209 IPQGSC 214
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 2 TVRLPQG 8
TVRLP+G
Sbjct: 186 TVRLPRG 192
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 3 VRLPQGTC 10
V +PQG C
Sbjct: 177 VPVPQGDC 184
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 1 VTVRLPQGT 9
+ + +PQGT
Sbjct: 575 IAIPIPQGT 583
>sp|NCAP_SARS|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 3 VRLPQGT 9
++LPQGT
Sbjct: 160 LQLPQGT 166
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 VTVRLPQGT 9
+ RLP GT
Sbjct: 285 IRFRLPDGT 293
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 2 TVRLPQG 8
TVR P+G
Sbjct: 476 TVRYPKG 482
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 4 RLPQGT 9
RLP+GT
Sbjct: 1946 RLPEGT 1951
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 4 RLPQGT 9
RLP+GT
Sbjct: 1942 RLPEGT 1947
>sp|UL33_HHV6U|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 6A (strain
Query: 5 LPQGTC 10
+PQ TC
Sbjct: 261 MPQNTC 266
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 VTVRLPQGT 9
+++ LP GT
Sbjct: 574 ISIPLPNGT 582
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VTVRLPQGT 9
+++ LP GT
Sbjct: 574 ISIPLPNGT 582
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 TVRLPQGT 9
TVRL GT
Sbjct: 4228 TVRLQAGT 4235
>sp|VE6_HPV94|PROTEIN E6|Human papillomavirus type 94
Query: 2 TVRLPQ 7
TVR+PQ
Sbjct: 143 TVRIPQ 148
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 TVRLPQGT 9
TVRL GT
Sbjct: 4228 TVRLQAGT 4235
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VTVRLP 6
VT+RLP
Sbjct: 106 VTIRLP 111
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 VTVRLPQGT 9
VTV+ P GT
Sbjct: 5588 VTVQGPPGT 5596
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 1 VTVRLP 6
VTVR+P
Sbjct: 350 VTVRIP 355
>sp|VE6_HPV28|PROTEIN E6|Human papillomavirus 28
Query: 2 TVRLPQ 7
TVR+PQ
Sbjct: 141 TVRIPQ 146
151|Sequence|751|760|PQGTCLTFSL
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 3 GTCLTFS 9
GTC TFS
Sbjct: 46 GTCETFS 52
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 3 GTCLTFS 9
GTC TFS
Sbjct: 46 GTCETFS 52
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 QGTCLTFSL 10
QGT TFS+
Sbjct: 1128 QGTSETFSM 1136
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 QGTCLTFSL 10
QGT TFS+
Sbjct: 1128 QGTSETFSM 1136
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 GTCLTFS 9
G CL+FS
Sbjct: 6745 GKCLSFS 6751
Query: 1 PQGTCL 6
P GTCL
Sbjct: 1150 PYGTCL 1155
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 QGTCLTFSL 10
QGT TFS+
Sbjct: 1128 QGTSETFSM 1136
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 PQGTCL 6
P GTCL
Sbjct: 1150 PYGTCL 1155
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 QGTCLTFSL 10
QGT TFS+
Sbjct: 1128 QGTSETFSM 1136
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 3 GTCLTFSL 10
GTC+T L
Sbjct: 486 GTCMTVRL 493
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 PQGTCLTF 8
P G CLT
Sbjct: 2161 PVGACLTL 2168
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 QGTCLTF 8
QG+C+T
Sbjct: 307 QGSCVTL 313
>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)
Query: 1 PQGTCLTFSL 10
PQ C FSL
Sbjct: 53 PQNFCPNFSL 62
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 GTCLTF 8
GTC TF
Sbjct: 46 GTCETF 51
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 PQGTCLTF 8
P G CLT
Sbjct: 2170 PVGRCLTL 2177
>sp|NCAP_SARS2|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 1 PQGTCLTFS 9
P GT LT++
Sbjct: 326 PSGTWLTYT 334
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 PQGTCLTF 8
P G CLT
Sbjct: 2182 PVGRCLTL 2189
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 PQGTCLTF 8
P G CLT
Sbjct: 2162 PVGRCLTL 2169
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PQGTCLT 7
P GTC++
Sbjct: 1248 PGGTCVS 1254
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 PQGTCLTF 8
P G CLT
Sbjct: 2163 PVGRCLTL 2170
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 PQGTCLTF 8
P G CLT
Sbjct: 2162 PVGRCLTL 2169
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 PQGTCLTF 8
P G CLT
Sbjct: 2173 PVGRCLTL 2180
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 PQGTCLTF 8
P G CLT
Sbjct: 2172 PVGRCLTL 2179
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PQGTCLT 7
P GTC++
Sbjct: 1248 PGGTCVS 1254
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 PQGTCLTF 8
P G CLT
Sbjct: 2180 PVGRCLTL 2187
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PQGTCLT 7
P GTC++
Sbjct: 1248 PGGTCVS 1254
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 PQGTCLTF 8
P G CLT
Sbjct: 2175 PVGRCLTL 2182
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 QGTCLTFSL 10
+ TC T+SL
Sbjct: 1378 RNTCRTYSL 1386
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 PQGTCLTF 8
P G CLT
Sbjct: 2172 PVGRCLTL 2179
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 PQGTCLTF 8
P G CLT
Sbjct: 2174 PVGRCLTL 2181
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 PQGTCLTF 8
P G CLT
Sbjct: 2163 PVGRCLTL 2170
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PQGTCLT 7
P GTC++
Sbjct: 1248 PGGTCVS 1254
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 PQGTCLTF 8
P G CLT
Sbjct: 2164 PVGRCLTL 2171
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 PQGTCLTF 8
P G CLT
Sbjct: 2164 PVGRCLTL 2171
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 1 PQGTC 5
P+GTC
Sbjct: 174 PKGTC 178
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 PQGTCLTF 8
P G CLT
Sbjct: 2164 PVGRCLTL 2171
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 5 CLTFS 9
CLTFS
Sbjct: 1109 CLTFS 1113
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 5 CLTFS 9
CLTFS
Sbjct: 1109 CLTFS 1113
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 5 CLTFS 9
CLTFS
Sbjct: 1109 CLTFS 1113
>sp|NCAP_SARS|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 1 PQGTCLTF 8
P GT LT+
Sbjct: 327 PSGTWLTY 334
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 1 PQGTCLT 7
P GTC T
Sbjct: 116 PNGTCET 122
>sp|UL62_HCMVA|UNCHARACTERIZED protein UL62|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PQGTCL 6
P GTC+
Sbjct: 178 PTGTCV 183
152|Sequence|756|765|LTFSLLCTLG
>sp|UL24_HHV6Z|PROTEIN UL24 homolog|Human herpesvirus 6B (strain Z29)
Query: 1 LTFSLLCTL 9
L+FS +C L
Sbjct: 165 LSFSFICDL 173
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 FSLLCTLG 10
F+L+CT+G
Sbjct: 992 FTLVCTVG 999
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 3 FSLLCTLG 10
F+L+CT+G
Sbjct: 992 FTLVCTVG 999
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 LTFSLLCTLG 10
L FSL+ +LG
Sbjct: 2480 LAFSLMKSLG 2489
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 LTFSLLCTLG 10
L FSL+ +LG
Sbjct: 2479 LAFSLMKSLG 2488
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 LTFSLLCTLG 10
L FSL+ +LG
Sbjct: 2480 LAFSLMKSLG 2489
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 1 LTFSLLC 7
L FSL+C
Sbjct: 456 LKFSLIC 462
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 TFSLLCTL 9
+FS++C L
Sbjct: 1537 SFSIMCRL 1544
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 TFSLLCTL 9
+FSL CT+
Sbjct: 1970 SFSLECTM 1977
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 FSLLCTLG 10
F+L CT+G
Sbjct: 991 FTLTCTVG 998
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 LTFSLLCTL 9
+TF LC L
Sbjct: 437 ITFDNLCNL 445
153|Sequence|761|770|LCTLGFDSVR
>sp|PG192_VACCC|PROTEIN OPG192|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CTLGFDSV 9
C +GFDS+
Sbjct: 68 CDVGFDSI 75
>sp|PG192_MONPV|PROTEIN OPG192|Monkeypox virus (MPXV)
Query: 2 CTLGFDSV 9
C +GFDS+
Sbjct: 68 CDVGFDSI 75
>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain AD169)
Query: 2 CTLGFDSV 9
CT+GF +V
Sbjct: 115 CTVGFATV 122
>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)
Query: 2 CTLGFDSV 9
CT+GF +V
Sbjct: 116 CTVGFATV 123
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LCTLGFDS 8
LCT F+S
Sbjct: 586 LCTFTFNS 593
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LCTLGFDS 8
LCT F+S
Sbjct: 586 LCTFTFNS 593
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LCTLGFDS 8
LCT F+S
Sbjct: 90 LCTFTFNS 97
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LCTLGFDS 8
LCT F+S
Sbjct: 587 LCTFTFNS 594
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LCTLGFDS 8
LCT F+S
Sbjct: 586 LCTFTFNS 593
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LCTLGFDS 8
LCT F+S
Sbjct: 586 LCTFTFNS 593
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LCTLGFDS 8
LCT F+S
Sbjct: 580 LCTFTFNS 587
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LCTLGFDS 8
LCT F+S
Sbjct: 586 LCTFTFNS 593
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LCTLGFDS 8
LCT F+S
Sbjct: 565 LCTFTFNS 572
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LCTLGFDS 8
LCT F+S
Sbjct: 586 LCTFTFNS 593
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LCTLGFDS 8
LCT F+S
Sbjct: 586 LCTFTFNS 593
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LCTLGFDS 8
LCT F+S
Sbjct: 586 LCTFTFNS 593
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 1 LCTLGFDSVR 10
LC FDS R
Sbjct: 105 LCVKQFDSRR 114
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 CTLGFDS 8
CTL FD+
Sbjct: 263 CTLIFDA 269
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 LCTLGFDSV 9
+ T+GFD V
Sbjct: 374 MSTVGFDRV 382
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 LCTLGFDSV 9
+ T+GFD V
Sbjct: 374 MSTVGFDRV 382
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 LCTLGF 6
CT+GF
Sbjct: 318 FCTVGF 323
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 LCTLGF 6
CT+GF
Sbjct: 318 FCTVGF 323
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 2 CTLGFDS 8
CT GF S
Sbjct: 277 CTCGFAS 283
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 2 CTLGFDS 8
CT GF S
Sbjct: 277 CTCGFAS 283
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 2 CTLGFDS 8
CT GF S
Sbjct: 277 CTCGFAS 283
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 2 CTLGFDS 8
CT GF S
Sbjct: 277 CTCGFAS 283
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 2 CTLGFDS 8
CT GF S
Sbjct: 276 CTCGFAS 282
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 2 CTLGFDS 8
CT GF S
Sbjct: 277 CTCGFAS 283
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 2 CTLGFDS 8
CT GF S
Sbjct: 276 CTCGFAS 282
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 CTLGFDSV 9
CT G D+V
Sbjct: 535 CTCGRDNV 542
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 CTLGFDSV 9
CT G D+V
Sbjct: 535 CTCGRDNV 542
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 2 CTLGFDS 8
CT GF S
Sbjct: 276 CTCGFAS 282
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 2 CTLGFDS 8
CT GF S
Sbjct: 277 CTCGFAS 283
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 2 CTLGFDS 8
CT GF S
Sbjct: 276 CTCGFAS 282
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 2 CTLGFDS 8
CT GF S
Sbjct: 276 CTCGFAS 282
154|Sequence|766|775|FDSVRKRMSV
>sp|PG165_MONPV|PROTEIN OPG165|Monkeypox virus (MPXV)
Query: 1 FDSVRKRM 8
FDSV K+M
Sbjct: 232 FDSVYKKM 239
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 1 FDSVRKRM 8
FD + KRM
Sbjct: 414 FDELEKRM 421
>sp|UL92_EBVB9|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain B95-8)
Query: 1 FDSVRKRM 8
+D+V KRM
Sbjct: 206 YDAVAKRM 213
>sp|UL92_EBVA8|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain AG876)
Query: 1 FDSVRKRM 8
+D+V KRM
Sbjct: 206 YDAVAKRM 213
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 4 VRKRMSV 10
VRKR+S+
Sbjct: 52 VRKRLSI 58
155|Sequence|771|780|KRMSVVVRHP
>sp|PG112_VAR67|LATE protein OPG112|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 MSVVVRHP 10
MS+ RHP
Sbjct: 29 MSIFKRHP 36
>sp|PG112_VACCC|LATE protein OPG112|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 MSVVVRHP 10
MS+ RHP
Sbjct: 29 MSIFKRHP 36
>sp|PG112_VACCA|LATE protein OPG112|Vaccinia virus (strain Ankara) (VACV)
Query: 3 MSVVVRHP 10
MS+ RHP
Sbjct: 29 MSIFKRHP 36
>sp|H7_VARV|LATE protein H7|Variola virus
Query: 3 MSVVVRHP 10
MS+ RHP
Sbjct: 29 MSIFKRHP 36
>sp|H7_VACCT|LATE protein H7|Vaccinia virus (strain Tian Tan)
Query: 3 MSVVVRHP 10
MS+ RHP
Sbjct: 29 MSIFKRHP 36
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 SVVVRHP 10
SV+V HP
Sbjct: 604 SVIVDHP 610
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 4 SVVVRHP 10
SV+V HP
Sbjct: 604 SVIVDHP 610
>sp|VE6_HPV61|PROTEIN E6|Human papillomavirus type 61
Query: 1 KRMSVVVRH 9
K +S+V RH
Sbjct: 45 KELSIVWRH 53
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KRMSVVVRHP 10
KR++++ HP
Sbjct: 1661 KRLTIMDLHP 1670
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 KRMSVVVRHP 10
KR++++ HP
Sbjct: 1660 KRLTIMDLHP 1669
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 KRMSVVVRHP 10
KR++++ HP
Sbjct: 1660 KRLTIMDLHP 1669
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 KRMSVVVRHP 10
KR++++ HP
Sbjct: 1660 KRLTIMDLHP 1669
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 KRMSVVVRHP 10
KR++++ HP
Sbjct: 1660 KRLTIMDLHP 1669
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 KRMSVVVRHP 10
KR++++ HP
Sbjct: 1660 KRLTIMDLHP 1669
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 KRMSVVVRHP 10
KR+ V HP
Sbjct: 1110 KRVGTTVPHP 1119
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 1 KRMSVVVRH 9
+ +SVV+RH
Sbjct: 378 RSISVVLRH 386
156|Sequence|776|785|VVRHPLTGEI
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 VVRHPLTGE 9
+VRHP G+
Sbjct: 579 IVRHPCNGQ 587
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 VRHPLTGEI 10
+ HPL GEI
Sbjct: 280 ITHPLRGEI 288
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 VRHPLTGEI 10
+ HPL GEI
Sbjct: 255 ITHPLRGEI 263
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 VVRHPLTGEI 10
V++H L GEI
Sbjct: 424 VLKHTLLGEI 433
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 VVRHPLTGEI 10
V++H L GEI
Sbjct: 426 VLKHTLLGEI 435
>sp|ORF11_TTVV3|ORF1/1 protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 VVRHPLTGE 9
+VRHP G+
Sbjct: 42 IVRHPCNGQ 50
>sp|PG040_VAR67|SUPERINFECTION exclusion protein|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 VVRHPLTGEI 10
++RH +TG I
Sbjct: 355 IIRHDITGFI 364
>sp|PG040_VACCC|SUPERINFECTION exclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VVRHPLTGEI 10
++RH +TG I
Sbjct: 351 IIRHDITGFI 360
>sp|PG040_VACCA|SUPERINFECTION exclusion protein|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VVRHPLTGEI 10
++RH +TG I
Sbjct: 351 IIRHDITGFI 360
>sp|PG040_MONPV|SUPERINFECTION exclusion protein|Monkeypox virus (MPXV)
Query: 1 VVRHPLTGEI 10
++RH +TG I
Sbjct: 357 IIRHDITGFI 366
>sp|TRX2_HHV6Z|TRIPLEX capsid protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 VVRHPLTGE 9
V+R P+TG+
Sbjct: 78 VLRKPMTGQ 86
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 VVRHPLTGEI 10
V +H L GEI
Sbjct: 424 VFKHTLLGEI 433
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 VVRHPLTGEI 10
V +H L GEI
Sbjct: 425 VFKHTLLGEI 434
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VRHPLTGEI 10
V+HPLT +
Sbjct: 1999 VKHPLTNNL 2007
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 VRHPLTGEI 10
V+HPLT +
Sbjct: 1972 VKHPLTNNL 1980
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 VRHPLTGEI 10
V+HPLT +
Sbjct: 1977 VKHPLTNNL 1985
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 5 PLTGEI 10
PLTGE+
Sbjct: 1372 PLTGEV 1377
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 1 VVRHPLTGEI 10
+VRH + GE+
Sbjct: 364 MVRHYMRGEM 373
>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)
Query: 3 RHPLTGE 9
RHP +GE
Sbjct: 758 RHPWSGE 764
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 VVRHPLTGEI 10
+ R+PL GE+
Sbjct: 26 IPRNPLHGEV 35
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 2 VRHPLTGE 9
V H +TGE
Sbjct: 363 VNHTITGE 370
>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 VRHPLT 7
VR+PLT
Sbjct: 134 VRYPLT 139
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 2 VRHPLTGE 9
+RH ++GE
Sbjct: 232 LRHKISGE 239
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 RHPLTGEI 10
RH LTG +
Sbjct: 661 RHSLTGNL 668
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 RHPLTGEI 10
RH LTG +
Sbjct: 661 RHSLTGNL 668
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 4 HPLTGEI 10
HP+ G+I
Sbjct: 1950 HPILGQI 1956
>sp|NEF_HV1BN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 VRHPLT 7
VR+PLT
Sbjct: 145 VRYPLT 150
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 2 VRHPLTGE 9
V H LTG+
Sbjct: 375 VNHTLTGQ 382
>sp|TRX2_HHV6U|TRIPLEX capsid protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VVRHPLTG 8
V+R P+TG
Sbjct: 78 VLRKPVTG 85
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 HPLTGE 9
H LTGE
Sbjct: 1205 HSLTGE 1210
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 3 RHPLTGE 9
R PLTG+
Sbjct: 51 RKPLTGK 57
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 HPLTGE 9
H LTGE
Sbjct: 1205 HSLTGE 1210
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 HPLTGE 9
H LTGE
Sbjct: 1205 HSLTGE 1210
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 HPLTGE 9
H LTGE
Sbjct: 1205 HSLTGE 1210
>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 VRHPLT 7
VR+PLT
Sbjct: 133 VRYPLT 138
>sp|NEF_HV1LA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 VRHPLT 7
VR+PLT
Sbjct: 133 VRYPLT 138
>sp|NEF_HV1BR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 VRHPLT 7
VR+PLT
Sbjct: 133 VRYPLT 138
157|Sequence|781|790|LTGEIVVYTK
>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)
Query: 1 LTGEIVVYTK 10
LTG ++YTK
Sbjct: 115 LTGSYIIYTK 124
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 1 LTGEIVVYTK 10
L EIV+YT+
Sbjct: 274 LAPEIVLYTE 283
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 4 EIVVYTK 10
EIV+YT+
Sbjct: 272 EIVLYTE 278
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 3 GEIVVYT 9
GE VV+T
Sbjct: 418 GEFVVFT 424
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 2 TGEIVVY 8
+GE++VY
Sbjct: 119 SGEMIVY 125
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 3 GEIVVYT 9
GE VV+T
Sbjct: 417 GEFVVFT 423
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 2 TGEIVVY 8
+GE++VY
Sbjct: 119 SGEMIVY 125
158|Sequence|786|795|VVYTKGADSV
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 3 YTKGAD 8
Y+KGAD
Sbjct: 475 YSKGAD 480
>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 2 VYTKGADS 9
V+TKG D+
Sbjct: 450 VFTKGKDN 457
>sp|PHOSP_PI1HD|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 2 VYTKGADS 9
V+TKG D+
Sbjct: 450 VFTKGKDN 457
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 2 VYTKGADS 9
V+TKG D+
Sbjct: 450 VFTKGKDN 457
>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 2 VYTKGADS 9
V+TKG D+
Sbjct: 450 VFTKGKDN 457
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 VVYTKGADSV 10
V+YT+G +V
Sbjct: 255 VIYTQGKRTV 264
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 VYTKGADS 9
V+T G+DS
Sbjct: 389 VWTSGSDS 396
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VYTKGADS 9
V+T G+DS
Sbjct: 399 VWTSGSDS 406
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VYTKGADS 9
V+T G+DS
Sbjct: 399 VWTSGSDS 406
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 2 VYTKGADS 9
+Y KGA+S
Sbjct: 274 LYIKGAES 281
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTKGA 7
+YT+GA
Sbjct: 187 IYTRGA 192
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTKGA 7
+YT+GA
Sbjct: 187 IYTRGA 192
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTKGA 7
+YT+GA
Sbjct: 187 IYTRGA 192
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTKGA 7
+YT+GA
Sbjct: 187 IYTRGA 192
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTKGA 7
+YT+GA
Sbjct: 187 IYTRGA 192
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTKGA 7
+YT+GA
Sbjct: 187 IYTRGA 192
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTKGA 7
+YT+GA
Sbjct: 187 IYTRGA 192
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTKGA 7
+YT+GA
Sbjct: 187 IYTRGA 192
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTKGA 7
+YT+GA
Sbjct: 187 IYTRGA 192
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VYTKGA 7
+YT+GA
Sbjct: 187 IYTRGA 192
>sp|DR5_HHV6U|UNCHARACTERIZED protein DR5|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 YTKGADS 9
YTKG S
Sbjct: 79 YTKGGSS 85
159|Sequence|791|800|GADSVIMDLL
>sp|MCES_YMTV5|MRNA-CAPPING enzyme small subunit|Yaba monkey tumor virus (strain
Query: 2 ADSVIMDL 9
AD+V++DL
Sbjct: 96 ADAVVIDL 103
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 ADSVIMDL 9
+DS+I+DL
Sbjct: 404 SDSMILDL 411
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 GADSVIMDLL 10
G D I+DL+
Sbjct: 2297 GVDQPILDLI 2306
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 GADSVIMDLL 10
G D I+DL+
Sbjct: 2297 GVDQPILDLI 2306
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 GADSVIMDLL 10
G D I+DL+
Sbjct: 2298 GVDQPILDLI 2307
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 GADSVIMDLL 10
G D ++DL+
Sbjct: 2261 GVDQALLDLI 2270
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 GADSVIMDLL 10
G D ++DL+
Sbjct: 2258 GVDQALLDLI 2267
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 2 ADSVIMDLL 10
ADS + DLL
Sbjct: 38 ADSDVSDLL 46
160|Sequence|796|805|IMDLLEDPAC
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 DLLEDP 8
DLLEDP
Sbjct: 2567 DLLEDP 2572
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 2 MDLLEDP 8
MD+ EDP
Sbjct: 404 MDIAEDP 410
>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 IMDLLEDP 8
+MD+ EDP
Sbjct: 284 LMDINEDP 291
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 5 LEDPAC 10
+EDP C
Sbjct: 259 IEDPVC 264
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 5 LEDPAC 10
+EDP C
Sbjct: 259 IEDPVC 264
>sp|GD_HHV23|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain 333)
Query: 4 LLEDPA 9
LLEDPA
Sbjct: 303 LLEDPA 308
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 4 LLEDPA 9
L+EDPA
Sbjct: 42 LIEDPA 47
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 4 LLEDPA 9
L+EDPA
Sbjct: 42 LIEDPA 47
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 4 LLEDPA 9
L+EDPA
Sbjct: 42 LIEDPA 47
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 4 LLEDPA 9
L+EDPA
Sbjct: 42 LIEDPA 47
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 4 LLEDPA 9
L+EDPA
Sbjct: 42 LIEDPA 47
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 4 LLEDPA 9
L+EDPA
Sbjct: 42 LIEDPA 47
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 4 LLEDPA 9
L+EDPA
Sbjct: 42 LIEDPA 47
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 4 LLEDPA 9
L+EDPA
Sbjct: 42 LIEDPA 47
>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)
Query: 4 LLEDPA 9
LLEDPA
Sbjct: 303 LLEDPA 308
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 4 LLEDPA 9
L+EDPA
Sbjct: 43 LIEDPA 48
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 IMDLLEDP 8
I LLEDP
Sbjct: 933 IEKLLEDP 940
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 IMDLLEDP 8
I LLEDP
Sbjct: 933 IEKLLEDP 940
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 IMDLLEDP 8
I LLEDP
Sbjct: 943 INKLLEDP 950
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 IMDLLEDP 8
I LLEDP
Sbjct: 943 INKLLEDP 950
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 DLLEDPAC 10
D L+ PAC
Sbjct: 612 DTLDYPAC 619
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 1 IMDLLEDP 8
I D+L DP
Sbjct: 124 IFDILTDP 131
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 IMDLLEDP 8
+ D+L DP
Sbjct: 121 VFDILTDP 128
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 MDLLEDPA 9
+DL+++PA
Sbjct: 413 IDLVDEPA 420
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 IMDLLED 7
IMD+LE+
Sbjct: 596 IMDILEE 602
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 IMDLLEDPAC 10
I+ LE+P C
Sbjct: 272 ILQGLEEPYC 281
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 1 IMDLLEDPAC 10
I+ LE+P C
Sbjct: 272 ILQGLEEPYC 281
161|Sequence|801|810|EDPACVPDIN
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 DPACVPDI 9
DP C PDI
Sbjct: 768 DPNCPPDI 775
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 DPACVPDIN 10
DP C PD++
Sbjct: 709 DPHCPPDLD 717
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 DPACVPDIN 10
DP C PD++
Sbjct: 709 DPHCPPDLD 717
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 DPACVPDIN 10
DP C PD++
Sbjct: 709 DPHCPPDLD 717
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 DPACVPDIN 10
DP C P+I+
Sbjct: 768 DPNCPPNID 776
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 2 DPACVPDIN 10
DP CVP I+
Sbjct: 298 DPDCVPVIH 306
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 1 EDPACVP 7
E+P CVP
Sbjct: 395 ENPECVP 401
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 DPACVPDI 9
DP C+P+I
Sbjct: 159 DPHCIPNI 166
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 CVPDIN 10
CVPD N
Sbjct: 468 CVPDAN 473
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 CVPDIN 10
CVPD N
Sbjct: 469 CVPDAN 474
>sp|UL28_HCMVA|UNCHARACTERIZED protein UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 CVPDIN 10
CVPD N
Sbjct: 147 CVPDAN 152
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 3 PACVPDI 9
P CVP I
Sbjct: 98 PVCVPSI 104
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DPACVPDIN 10
+P C PD N
Sbjct: 348 EPFCKPDRN 356
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 DPACVPD 8
DP CV D
Sbjct: 560 DPLCVED 566
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 ACVPDIN 10
ACV D+N
Sbjct: 1216 ACVVDVN 1222
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 DPACVPDI 9
DP C P +
Sbjct: 261 DPGCPPGV 268
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 DPACVPDI 9
DP C P +
Sbjct: 261 DPGCPPGV 268
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 DPACVPDI 9
DP C P +
Sbjct: 261 DPGCPPGV 268
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 ACVPDIN 10
ACV D+N
Sbjct: 1216 ACVVDVN 1222
>sp|PG070_VACCC|PROTEIN OPG070|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PACVPDIN 10
P C+ DI+
Sbjct: 197 PICIKDID 204
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 1 EDPACVPDIN 10
+DPA + DIN
Sbjct: 391 DDPANIADIN 400
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 5 CVPDI 9
C+PDI
Sbjct: 374 CIPDI 378
>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10
Query: 2 DPACVPDIN 10
DP C P I+
Sbjct: 292 DPDCAPVIH 300
>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)
Query: 2 DPACVPDI 9
DP C+ +I
Sbjct: 388 DPLCIANI 395
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 PACVPD 8
PAC PD
Sbjct: 511 PACPPD 516
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 DPACVPD 8
DP C+ D
Sbjct: 553 DPLCIED 559
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 2 DPACVPDI 9
DPA +P I
Sbjct: 592 DPALLPSI 599
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 2 DPACVPDIN 10
DP C P I+
Sbjct: 304 DPDCAPVIH 312
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 DPACVPD 8
DP C+ D
Sbjct: 553 DPLCIED 559
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 2 DPACVPDI 9
DPA +P I
Sbjct: 592 DPALLPSI 599
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 2 DPACVP 7
DP C P
Sbjct: 291 DPDCAP 296
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 2 DPACVPDI 9
DPA +P I
Sbjct: 592 DPALLPSI 599
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 4 ACVPDI 9
AC+P+I
Sbjct: 455 ACIPEI 460
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 EDPACV 6
+DP+C+
Sbjct: 1844 KDPSCI 1849
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 2 DPACVPDI 9
+P C P+I
Sbjct: 97 EPICEPNI 104
>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PACVPDIN 10
P C PD++
Sbjct: 253 PICHPDVS 260
>sp|US03_HCMVT|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 ACVPDI 9
ACVP +
Sbjct: 128 ACVPQV 133
>sp|US03_HCMVM|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 ACVPDI 9
ACVP +
Sbjct: 128 ACVPQV 133
>sp|US03_HCMVA|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 ACVPDI 9
ACVP +
Sbjct: 128 ACVPQV 133
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DPACVPDI 9
+P C P+I
Sbjct: 95 EPICEPNI 102
>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 CVPDIN 10
C+ DIN
Sbjct: 475 CIKDIN 480
>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)
Query: 5 CVPDIN 10
C+ DIN
Sbjct: 478 CIKDIN 483
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 2 DPACVPDI 9
DPA +P I
Sbjct: 587 DPALLPSI 594
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 DPACVP 7
+PAC P
Sbjct: 286 EPACAP 291
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PACVPDI 9
P C+P I
Sbjct: 486 PICLPQI 492
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 DPACVPD 8
DPA PD
Sbjct: 447 DPAAGPD 453
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)
Query: 5 CVPDIN 10
C PD N
Sbjct: 117 CAPDFN 122
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 5 CVPDIN 10
C PD N
Sbjct: 117 CAPDFN 122
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 DPACVP 7
+PAC P
Sbjct: 286 EPACAP 291
162|Sequence|806|815|VPDINMEKKL
>sp|VTF3S_MONPV|INTERMEDIATE transcription factor 3 small|Monkeypox virus (MPXV)
Query: 1 VPDINME 7
VPD+N+E
Sbjct: 5 VPDLNLE 11
>sp|VTF3S_VACCC|INTERMEDIATE transcription factor 3 small|Vaccinia virus (strain Copenhagen)
Query: 1 VPDINME 7
VPD+N+E
Sbjct: 5 VPDLNLE 11
>sp|VTF3S_VACCA|INTERMEDIATE transcription factor 3 small|Vaccinia virus (strain Ankara)
Query: 1 VPDINME 7
VPD+N+E
Sbjct: 5 VPDLNLE 11
>sp|VTF3S_VARV|INTERMEDIATE transcription factor 3 small|Variola virus
Query: 1 VPDINME 7
VPD+N+E
Sbjct: 5 VPDLNLE 11
>sp|VTF3S_VAR67|INTERMEDIATE transcription factor 3 small|Variola virus (isolate
Query: 1 VPDINME 7
VPD+N+E
Sbjct: 5 VPDLNLE 11
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 2 PDINME 7
PDI+ME
Sbjct: 257 PDIDME 262
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 PDINMEKKL 10
PD+ +KKL
Sbjct: 1684 PDVTHKKKL 1692
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 2 PDINME 7
PDI+ME
Sbjct: 253 PDIDME 258
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 3 DINMEKKL 10
DIN EKKL
Sbjct: 139 DINGEKKL 146
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)
Query: 2 PDINME 7
PD NME
Sbjct: 119 PDFNME 124
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 2 PDINME 7
PD NME
Sbjct: 119 PDFNME 124
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 PDINMEKKL 10
P ++MEKK+
Sbjct: 1460 PLMDMEKKI 1468
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PDINM 6
PDINM
Sbjct: 389 PDINM 393
>sp|UL65_HCMVA|UNCHARACTERIZED protein UL65|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VPDINMEKK 9
VP ++ EKK
Sbjct: 9 VPSLSSEKK 17
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 1 VPDINMEKK 9
VP ++ EKK
Sbjct: 80 VPSLSSEKK 88
163|Sequence|811|820|MEKKLRKIRA
>sp|LHDAG_HDVS1|LARGE delta antigen|Hepatitis delta virus genotype II
Query: 1 MEKKLRKIR 9
+EK LRK R
Sbjct: 31 LEKDLRKTR 39
>sp|LHDAG_HDV83|LARGE delta antigen|Hepatitis delta virus genotype II
Query: 1 MEKKLRKIR 9
+EK LRK R
Sbjct: 31 LEKDLRKTR 39
>sp|SHDAG_HDVS1|SMALL delta antigen|Hepatitis delta virus genotype II
Query: 1 MEKKLRKIR 9
+EK LRK R
Sbjct: 31 LEKDLRKTR 39
>sp|SHDAG_HDV83|SMALL delta antigen|Hepatitis delta virus genotype II
Query: 1 MEKKLRKIR 9
+EK LRK R
Sbjct: 31 LEKDLRKTR 39
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 MEKKLRKIRA 10
MEKK +RA
Sbjct: 3870 MEKKREAVRA 3879
>sp|LHDAG_HDVS2|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 1 MEKKLRKIR 9
+EK LRK R
Sbjct: 31 LEKDLRKAR 39
164|Sequence|816|825|RKIRARTQKH
***** No hits found ******
165|Sequence|821|830|RTQKHLDLYA
>sp|UL24_HHV6U|PROTEIN UL24 homolog|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 QKHLDLY 9
QKH DLY
Sbjct: 199 QKHTDLY 205
>sp|UL24_HHV6G|PROTEIN UL24 homolog|Human herpesvirus 6A (strain GS)
Query: 3 QKHLDLY 9
QKH DLY
Sbjct: 199 QKHTDLY 205
>sp|UL24_HHV6Z|PROTEIN UL24 homolog|Human herpesvirus 6B (strain Z29)
Query: 3 QKHLDLY 9
QKH DLY
Sbjct: 199 QKHTDLY 205
>sp|UL76_HCMVM|PROTEIN UL76|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 QKHLDLY 9
+KHLD+Y
Sbjct: 29 RKHLDIY 35
>sp|UL76_HCMVA|PROTEIN UL76|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 QKHLDLY 9
+KHLD+Y
Sbjct: 29 RKHLDIY 35
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 QKHLDLY 9
Q HLDL+
Sbjct: 1558 QDHLDLW 1564
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 QKHLDLYA 10
+KH+DL A
Sbjct: 259 RKHVDLLA 266
>sp|VP8_VARV|CORE protein VP8|Variola virus
Query: 2 TQKHLDLYA 10
T K L+LY+
Sbjct: 210 TNKELELYS 218
>sp|VP8_VAR67|CORE protein VP8|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 TQKHLDLYA 10
T K L+LY+
Sbjct: 210 TNKELELYS 218
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 TQKHLD 7
+Q+HLD
Sbjct: 736 SQRHLD 741
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 TQKHLD 7
+Q+HLD
Sbjct: 736 SQRHLD 741
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 2 TQKHLDLY 9
+QK+ DLY
Sbjct: 333 SQKYADLY 340
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 TQKHLDLY 9
T+K LDL+
Sbjct: 1444 TEKDLDLF 1451
166|Sequence|826|835|LDLYARDGLR
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 DLYARDGLR 10
DLY RDG++
Sbjct: 1575 DLYNRDGVK 1583
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 DLYARDGLR 10
DLY RDG++
Sbjct: 1575 DLYNRDGVK 1583
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 DLYARDGLR 10
DLYA GL+
Sbjct: 1018 DLYANTGLK 1026
>sp|PHOSP_ABLVH|PHOSPHOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 5 ARDGLR 10
ARDGLR
Sbjct: 251 ARDGLR 256
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LDLYARDGLR 10
L+LY+RD R
Sbjct: 641 LELYSRDEQR 650
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LDLYARDGLR 10
L+LY+RD R
Sbjct: 641 LELYSRDEQR 650
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LDLYARDGLR 10
L+LY+RD R
Sbjct: 641 LELYSRDEQR 650
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 LDLYARDGL 9
+D Y R+GL
Sbjct: 489 MDTYLRNGL 497
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 1 LDLYARDGL 9
+D Y R+GL
Sbjct: 487 MDTYLRNGL 495
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 LDLYARDGL 9
+D Y R+GL
Sbjct: 490 MDTYLRNGL 498
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 LDLYARDGL 9
+D Y R+GL
Sbjct: 486 MDTYLRNGL 494
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 1 LDLYARDGL 9
+D Y R+GL
Sbjct: 488 MDTYLRNGL 496
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 LDLYARDGL 9
+D Y R+GL
Sbjct: 487 MDTYLRNGL 495
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 LDLYARDGL 9
+D Y R+GL
Sbjct: 488 MDTYLRNGL 496
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 LDLYARDGL 9
+D Y R+GL
Sbjct: 489 MDTYLRNGL 497
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 1 LDLYARDGL 9
+D Y R+GL
Sbjct: 487 MDTYLRNGL 495
>sp|PHOSP_HRSVB|PHOSPHOPROTEIN respiratory syncytial virus B
Query: 5 ARDGLR 10
ARDG+R
Sbjct: 162 ARDGIR 167
>sp|PHOSP_HRSV1|PHOSPHOPROTEIN respiratory syncytial virus B
Query: 5 ARDGLR 10
ARDG+R
Sbjct: 162 ARDGIR 167
>sp|PHOSP_HMPVC|PHOSPHOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 5 ARDGLR 10
ARDG+R
Sbjct: 203 ARDGIR 208
>sp|PHOSP_HRSVA|PHOSPHOPROTEIN respiratory syncytial virus A
Query: 5 ARDGLR 10
ARDG+R
Sbjct: 162 ARDGIR 167
>sp|PHOSP_HRSV|PHOSPHOPROTEIN respiratory syncytial virus
Query: 5 ARDGLR 10
ARDG+R
Sbjct: 162 ARDGIR 167
>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34
Query: 1 LDLYARDGL 9
L+LY RD +
Sbjct: 17 LELYERDSI 25
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 1 LDLYARDGL 9
+D Y R+GL
Sbjct: 487 IDTYLRNGL 495
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 LDLYARDGL 9
+D Y R+GL
Sbjct: 492 IDTYLRNGL 500
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 5 ARDGLR 10
ARDG+R
Sbjct: 2589 ARDGVR 2594
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 ARDGLR 10
ARDG+R
Sbjct: 2589 ARDGVR 2594
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 1 LDLYARDGL 9
+D++ R+GL
Sbjct: 490 IDMFLRNGL 498
>sp|UL64_HCMVA|UNCHARACTERIZED protein UL64|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DLYARDG 8
DLY R+G
Sbjct: 89 DLYNREG 95
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 LDLYARDGL 9
+D Y R+GL
Sbjct: 488 MDQYLRNGL 496
>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)
Query: 1 LDLYARDGL 9
L+ +ARDG+
Sbjct: 225 LEKWARDGV 233
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 1 LDLYARDGL 9
+D Y R+GL
Sbjct: 488 IDQYLRNGL 496
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DLYARDGLR 10
+L +RDG+R
Sbjct: 121 ELPSRDGIR 129
>sp|UNG_HHV2H|URACIL-DNA glycosylase|Human herpesvirus 2 (strain HG52)
Query: 1 LDLYARDGL 9
L+ +ARDG+
Sbjct: 146 LEKWARDGV 154
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 3 LYARDGLR 10
+Y R G+R
Sbjct: 309 MYTRSGIR 316
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 1 LDLYARD 7
L+LY RD
Sbjct: 16 LELYERD 22
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 3 LYARDGL 9
LYARD L
Sbjct: 1178 LYARDTL 1184
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 1 LDLYARDGL 9
+D Y R+GL
Sbjct: 492 IDQYLRNGL 500
>sp|VU84_HHV7J|PROTEIN U84|Human herpesvirus 7 (strain JI)
Query: 1 LDLYARDGL 9
+ +Y+R+GL
Sbjct: 161 IQVYSRNGL 169
>sp|UNG_HHV23|URACIL-DNA glycosylase|Human herpesvirus 2 (strain 333)
Query: 1 LDLYARDGL 9
L+ +ARDG+
Sbjct: 186 LEKWARDGV 194
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 1 LDLYARDGL 9
+D Y R+GL
Sbjct: 492 IDQYLRNGL 500
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 LDLYARDGL 9
+D Y R+GL
Sbjct: 487 MDNYLRNGL 495
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 LYARDGL 9
LYA +GL
Sbjct: 85 LYANEGL 91
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 LYARDGL 9
LYA +GL
Sbjct: 85 LYANEGL 91
167|Sequence|831|840|RDGLRTLCIA
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 GLRTLCI 9
GLR LCI
Sbjct: 711 GLRNLCI 717
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 3 GLRTLCI 9
GLR LCI
Sbjct: 710 GLRNLCI 716
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 2 DGLRTLC 8
DGLR LC
Sbjct: 389 DGLRWLC 395
>sp|VE7_HPV68|PROTEIN E7|Human papillomavirus 68
Query: 1 RDGLRTL 7
RD LRTL
Sbjct: 84 RDNLRTL 90
>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)
Query: 5 RTLCIA 10
RTLCI+
Sbjct: 117 RTLCIS 122
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 3 GLRTLCIA 10
G+R C+A
Sbjct: 376 GIREYCVA 383
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 3 GLRTLCIA 10
G+R C+A
Sbjct: 376 GIREYCVA 383
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RDGLRTLC 8
RD + T+C
Sbjct: 472 RDAMGTIC 479
168|Sequence|836|845|TLCIAKKVVS
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 TLCIAKKVV 9
T+C+ KKV+
Sbjct: 1405 TVCLGKKVI 1413
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 1 TLCIAKKVVS 10
T+C +KK VS
Sbjct: 117 TICTSKKQVS 126
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 1 TLCIAKKVVS 10
T+C +KK +S
Sbjct: 117 TICTSKKQIS 126
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 CIAKKVV 9
C+ KKV+
Sbjct: 2159 CVTKKVI 2165
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 TLCIAKKVV 9
T+C KKV+
Sbjct: 1405 TVCHGKKVI 1413
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TLCIAKKV 8
T CIAK++
Sbjct: 848 TSCIAKQL 855
169|Sequence|841|850|KKVVSEEDFR
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 1 KKVVSEEDF 9
KKVV DF
Sbjct: 300 KKVVKRSDF 308
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KKVVSEEDF 9
KK+V DF
Sbjct: 329 KKIVKRSDF 337
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 1 KKVVSEEDF 9
KK+V DF
Sbjct: 329 KKIVKRSDF 337
170|Sequence|846|855|EEDFRRWASF
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EEDFRRWASF 10
+EDFR++ +F
Sbjct: 708 DEDFRKYTAF 717
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EEDFRRWASF 10
+EDFR++ +F
Sbjct: 720 DEDFRKYTAF 729
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EEDFRRWASF 10
+EDFR++ +F
Sbjct: 713 DEDFRKYTAF 722
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EEDFRRWASF 10
+EDFR++ +F
Sbjct: 705 DEDFRKYTAF 714
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EEDFRRWASF 10
+EDFR++ +F
Sbjct: 708 DEDFRKYTAF 717
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EEDFRRWASF 10
+EDFR++ +F
Sbjct: 708 DEDFRKYTAF 717
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EEDFRRWASF 10
+EDFR++ +F
Sbjct: 720 DEDFRKYTAF 729
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EEDFRRWASF 10
+EDFR++ +F
Sbjct: 708 DEDFRKYTAF 717
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EEDFRRWASF 10
+EDFR++ +F
Sbjct: 720 DEDFRKYTAF 729
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EEDFRRWASF 10
+EDFR++ +F
Sbjct: 706 DEDFRKYTAF 715
>sp|SPI1_CWPXB|SERINE proteinase inhibitor 1|Cowpox virus (strain Brighton Red)
Query: 1 EEDFRRWAS 9
+E+F++W S
Sbjct: 230 DENFKKWCS 238
>sp|SPI1_VARV|SERINE proteinase inhibitor 1|Variola virus
Query: 1 EEDFRRW 7
EE+F++W
Sbjct: 247 EENFKKW 253
>sp|SPI1_VAR67|SERINE proteinase inhibitor 1|Variola virus (isolate
Query: 1 EEDFRRW 7
EE+F++W
Sbjct: 247 EENFKKW 253
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EDFRRWASF 10
EDFR++ +F
Sbjct: 709 EDFRKYTAF 717
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EDFRRWASF 10
EDFR++ +F
Sbjct: 710 EDFRKYTAF 718
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 EDFRRWASF 10
EDFR++ +F
Sbjct: 733 EDFRQYTAF 741
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 EDFRRWASF 10
EDFR++ +F
Sbjct: 734 EDFRQYTAF 742
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 EDFRRWASF 10
EDFR++ +F
Sbjct: 733 EDFRQYTAF 741
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 EDFRRWASF 10
EDFR++ +F
Sbjct: 731 EDFRQYTAF 739
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 EDFRRWASF 10
EDFR++ +F
Sbjct: 733 EDFRQYTAF 741
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 EDFRRWASF 10
EDFR++ +F
Sbjct: 732 EDFRQYTAF 740
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 2 EDFRRW 7
+DFR+W
Sbjct: 130 KDFRKW 135
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 EDFRRW 7
+DFR+W
Sbjct: 130 KDFRKW 135
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 2 EDFRRW 7
+DF+RW
Sbjct: 127 QDFQRW 132
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 EDFRRWASF 10
EDFR++ +F
Sbjct: 733 EDFRQYTAF 741
>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)
Query: 4 FRRWASF 10
F RWA+F
Sbjct: 394 FTRWAAF 400
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 EDFRRWA 8
EDF WA
Sbjct: 3474 EDFNVWA 3480
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 EDFRRWA 8
EDF WA
Sbjct: 3512 EDFNVWA 3518
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 EDFRRWA 8
EDF WA
Sbjct: 3532 EDFNVWA 3538
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 EDFRRWA 8
EDF WA
Sbjct: 3562 EDFNVWA 3568
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 EDFRRWA 8
EDF WA
Sbjct: 3474 EDFNVWA 3480
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 EDFRRWA 8
EDF WA
Sbjct: 3512 EDFNVWA 3518
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 EDFRRWA 8
EDF WA
Sbjct: 3532 EDFNVWA 3538
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 EDFRRWA 8
EDF WA
Sbjct: 3562 EDFNVWA 3568
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 EEDFRRWASF 10
+ D + WA+F
Sbjct: 304 QSDRKAWAAF 313
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 6 RWASF 10
RW+SF
Sbjct: 68 RWSSF 72
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 EDFRRW 7
E+F RW
Sbjct: 2665 ENFERW 2670
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 DFRRWAS 9
DF+ W S
Sbjct: 1994 DFKNWLS 2000
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 DFRRWAS 9
DF+ W S
Sbjct: 1994 DFKNWLS 2000
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 DFRRWAS 9
DF+ W S
Sbjct: 1994 DFKNWLS 2000
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 DFRRWAS 9
DF+ W S
Sbjct: 1994 DFKNWLS 2000
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 1 EEDFRRW 7
+EDFR++
Sbjct: 366 QEDFRQY 372
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 6 RWASF 10
RWA+F
Sbjct: 855 RWAAF 859
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 6 RWASF 10
RWA+F
Sbjct: 855 RWAAF 859
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 6 RWASF 10
RWA+F
Sbjct: 855 RWAAF 859
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 6 RWASF 10
RWA+F
Sbjct: 855 RWAAF 859
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 5 RRWASF 10
R WA+F
Sbjct: 662 RNWAAF 667
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 5 RRWASF 10
R WA+F
Sbjct: 643 RNWAAF 648
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 5 RRWASF 10
R WA+F
Sbjct: 658 RNWAAF 663
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 5 RRWASF 10
R WA+F
Sbjct: 641 RNWAAF 646
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 5 RRWASF 10
R WA+F
Sbjct: 661 RNWAAF 666
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 5 RRWASF 10
R WA+F
Sbjct: 686 RNWAAF 691
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 DFRRWAS 9
DF+ W S
Sbjct: 1998 DFKTWLS 2004
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 DFRRWAS 9
DF+ W S
Sbjct: 1996 DFKTWLS 2002
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DFRRW 7
DF++W
Sbjct: 133 DFKKW 137
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DFRRW 7
DF++W
Sbjct: 133 DFKKW 137
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 5 RRWASF 10
R WA+F
Sbjct: 637 RNWAAF 642
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 5 RRWASF 10
R WA+F
Sbjct: 670 RNWAAF 675
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 5 RRWASF 10
R WA+F
Sbjct: 655 RNWAAF 660
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 6 RWASF 10
RW+SF
Sbjct: 68 RWSSF 72
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 DFRRWAS 9
DF+ W S
Sbjct: 1996 DFKAWLS 2002
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 1 EEDFRR 6
EED+RR
Sbjct: 87 EEDWRR 92
171|Sequence|851|860|RWASFRREAE
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RWASFRR 7
RW+SF++
Sbjct: 68 RWSSFKK 74
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 WASFRRE 8
W +F+RE
Sbjct: 1668 WTTFKRE 1674
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 WASFRRE 8
W +F+RE
Sbjct: 1668 WTTFKRE 1674
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RWASFRR 7
RW SF++
Sbjct: 68 RWGSFKK 74
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 1 RWASFRR 7
+W S+RR
Sbjct: 91 QWGSYRR 97
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RWASFRR 7
RW+SF++
Sbjct: 68 RWSSFKK 74
>sp|UNG_HHV2H|URACIL-DNA glycosylase|Human herpesvirus 2 (strain HG52)
Query: 2 WASFRR 7
WA+FRR
Sbjct: 30 WAAFRR 35
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RWASFRR 7
RW SF++
Sbjct: 68 RWGSFKK 74
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 2 WASFR 6
WA+FR
Sbjct: 645 WAAFR 649
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 2 WASFR 6
WA+FR
Sbjct: 643 WAAFR 647
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 2 WASFR 6
WA+FR
Sbjct: 660 WAAFR 664
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 2 WASFR 6
WA+FR
Sbjct: 663 WAAFR 667
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 2 WASFR 6
WA+FR
Sbjct: 664 WAAFR 668
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RWASFRR 7
RW SF++
Sbjct: 68 RWGSFKK 74
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 2 WASFR 6
WA+FR
Sbjct: 688 WAAFR 692
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 2 WASFRREA 9
W+ FR+ A
Sbjct: 363 WSPFRKSA 370
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 2 WASFRREA 9
W+ FR+ A
Sbjct: 363 WSPFRKSA 370
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 2 WASFRREA 9
W+ FR+ A
Sbjct: 363 WSPFRKSA 370
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 2 WASFRREA 9
W+ FR+ A
Sbjct: 363 WSPFRKSA 370
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 2 WASFR 6
WA+FR
Sbjct: 639 WAAFR 643
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 2 WASFR 6
WA+FR
Sbjct: 657 WAAFR 661
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 2 WASFR 6
WA+FR
Sbjct: 672 WAAFR 676
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 2 WASFRREA 9
W+ FR+ A
Sbjct: 363 WSPFRKSA 370
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 WASFRR 7
W +FRR
Sbjct: 46 WITFRR 51
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 2 WASFRR 7
WA+F R
Sbjct: 820 WAAFER 825
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 WASFRR 7
WA+F R
Sbjct: 820 WAAFER 825
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 RWASFRREAE 10
+W R++AE
Sbjct: 394 KWVERRQQAE 403
>sp|SHDAG_HDVTW|SMALL delta antigen|Hepatitis delta virus genotype II
Query: 1 RWASFRREAE 10
+W + RR+AE
Sbjct: 20 KWITTRRKAE 29
>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24
Query: 2 WASFRREA 9
W + RREA
Sbjct: 33 WQALRREA 40
172|Sequence|856|865|RREAEASLDN
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 EAEASLDN 10
+AEA+L+N
Sbjct: 743 QAEATLEN 750
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 EAEASLDN 10
+AEA+L+N
Sbjct: 744 QAEAALEN 751
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 EAEASLDN 10
+AEA+L+N
Sbjct: 745 QAEAALEN 752
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 EAEASLDN 10
+AEA+L+N
Sbjct: 743 QAEAALEN 750
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 EAEASLDN 10
+AEA+L+N
Sbjct: 744 QAEAALEN 751
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 EAEASLDN 10
+AEA+L+N
Sbjct: 743 QAEAALEN 750
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 EAEASLDN 10
+AEA+L+N
Sbjct: 749 QAEAALEN 756
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 EAEASLDN 10
+AEA+L+N
Sbjct: 743 QAEAALEN 750
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 EAEASLDN 10
+AEA+L+N
Sbjct: 747 QAEAALEN 754
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 EAEASLDN 10
+AEA+L+N
Sbjct: 748 QAEAALEN 755
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 EAEASLDN 10
+AEA+L+N
Sbjct: 743 QAEAALEN 750
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 EAEASLDN 10
+AEA+L+N
Sbjct: 743 QAEAALEN 750
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 3 EAEASLDN 10
+AEA+L+N
Sbjct: 743 QAEAALEN 750
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 EAEASLDN 10
+AEA+L+N
Sbjct: 743 QAEAALEN 750
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 EAEASLDN 10
+AEA+L+N
Sbjct: 743 QAEAALEN 750
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 EAEASLDN 10
+AEA+L+N
Sbjct: 743 QAEAALEN 750
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 EAEASLDN 10
+AEA+L+N
Sbjct: 743 QAEAALEN 750
173|Sequence|861|870|ASLDNRDELL
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 ASLDNRDELL 10
AS+DN+DE +
Sbjct: 1300 ASIDNKDEFM 1309
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 ASLDNRDELL 10
AS+DN+DE +
Sbjct: 1300 ASIDNKDEFM 1309
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 ASLDNRDELL 10
AS+DN+DE +
Sbjct: 1300 ASIDNKDEFM 1309
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 SLDNRDEL 9
SLDN DE+
Sbjct: 517 SLDNPDEI 524
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 4 DNRDEL 9
D+RDEL
Sbjct: 523 DHRDEL 528
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 ASLDNRDELL 10
ASLDN+ L
Sbjct: 1303 ASLDNKGMLF 1312
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 ASLDNRDELL 10
ASLDN+ L
Sbjct: 1304 ASLDNKGMLF 1313
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 1 ASLDNRDEL 9
A DNRD +
Sbjct: 137 ADTDNRDNV 145
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 1 ASLDNRDEL 9
A DNRD +
Sbjct: 138 ADTDNRDNV 146
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 2 SLDNRD 7
SL+NRD
Sbjct: 129 SLENRD 134
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 2 SLDNRD 7
SL+NRD
Sbjct: 129 SLENRD 134
174|Sequence|866|875|RDELLMETAQ
***** No hits found ******
175|Sequence|871|880|METAQHLENQ
>sp|YL15_ADE41|UNCHARACTERIZED 12.4 kDa protein in|Human adenovirus F serotype 41
Query: 1 METAQHL 7
MET HL
Sbjct: 1 METVSHL 7
>sp|UL24_VZVO|PROTEIN UL24 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 AQHLEN 9
A HLEN
Sbjct: 176 ASHLEN 181
>sp|UL24_VZVD|PROTEIN UL24 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 AQHLEN 9
A HLEN
Sbjct: 176 ASHLEN 181
176|Sequence|876|885|HLENQLTLLG
>sp|W_NIPAV|PROTEIN W|Nipah virus
Query: 1 HLENQLTLLG 10
HLEN+L+ G
Sbjct: 176 HLENKLSTTG 185
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 1 HLENQLTLLG 10
HLEN+L+ G
Sbjct: 176 HLENKLSTTG 185
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 1 HLENQLTLLG 10
HLEN+L+ G
Sbjct: 176 HLENKLSTTG 185
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 1 HLENQLTL 8
H+ENQ L
Sbjct: 253 HIENQFVL 260
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HLENQLTLL 9
H E QLTL+
Sbjct: 229 HREAQLTLI 237
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HLENQLTLL 9
H E QLTL+
Sbjct: 228 HREAQLTLI 236
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HLENQLTLL 9
H E QLTL+
Sbjct: 229 HREAQLTLI 237
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 1 HLENQLTLLG 10
HL+ +LTL G
Sbjct: 44 HLQAELTLEG 53
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 LENQLTLL 9
LENQ+T L
Sbjct: 1167 LENQITHL 1174
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 1 HLENQLTL 8
HL NQ+ L
Sbjct: 306 HLHNQILL 313
>sp|SPIKE_ADE1H|FIBER protein|Human adenovirus D serotype 15/H9
Query: 2 LENQLTLLG 10
++N+LTLL
Sbjct: 104 IDNKLTLLA 112
>sp|SPIKE_ADE09|FIBER protein|Human adenovirus D serotype 9
Query: 2 LENQLTLLG 10
++N+LTLL
Sbjct: 104 IDNKLTLLA 112
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HLENQLT 7
HL+NQ++
Sbjct: 1327 HLKNQIS 1333
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HLENQLT 7
HL+NQ++
Sbjct: 1328 HLKNQIS 1334
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HLENQLT 7
HL+NQ++
Sbjct: 1327 HLKNQIS 1333
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HLENQLT 7
HL+NQ++
Sbjct: 1328 HLKNQIS 1334
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HLENQLT 7
HL+NQ++
Sbjct: 1326 HLKNQIS 1332
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HLENQLT 7
HL+NQ++
Sbjct: 1326 HLKNQIS 1332
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HLENQLT 7
HL+NQ++
Sbjct: 1327 HLKNQIS 1333
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 LENQLTLLG 10
+ NQ T+LG
Sbjct: 524 INNQWTILG 532
>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8
Query: 2 LENQLTLLG 10
++N+LTLL
Sbjct: 104 IDNKLTLLA 112
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 2 LENQLTLLG 10
+ NQ T+LG
Sbjct: 524 INNQWTILG 532
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 HLENQLTLL 9
HL+NQ+ L
Sbjct: 1326 HLKNQIDRL 1334
177|Sequence|881|890|LTLLGATGIE
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 LTLLGATGIE 10
LTL GAT E
Sbjct: 1183 LTLQGATTTE 1192
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 LTLLGATGIE 10
LTL GAT E
Sbjct: 1183 LTLQGATTTE 1192
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 LTLLGATGIE 10
LTL GAT E
Sbjct: 1183 LTLQGATTTE 1192
178|Sequence|886|895|ATGIEDRLQE
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 GIEDRLQ 9
GIE RLQ
Sbjct: 639 GIEHRLQ 645
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 2 TGIEDRLQE 10
+G+E R+Q+
Sbjct: 416 SGVEGRIQD 424
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 IEDRLQE 10
IED LQE
Sbjct: 189 IEDNLQE 195
>sp|VP24_EBOZM|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 ATGIEDRL 8
A GI+D+L
Sbjct: 99 AAGIQDQL 106
>sp|VP24_EBOZ5|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 ATGIEDRL 8
A GI+D+L
Sbjct: 99 AAGIQDQL 106
>sp|VP24_EBOG4|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 ATGIEDRL 8
A GI+D+L
Sbjct: 99 AAGIQDQL 106
179|Sequence|891|900|DRLQEGVPDT
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 1 DRLQEGVPDT 10
+RLQE PD
Sbjct: 346 ERLQEFFPDA 355
>sp|VP40_EBOSU|MATRIX protein VP40|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 DRLQEGVPD 9
+RL +G+PD
Sbjct: 136 NRLGQGIPD 144
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 1 DRLQEGVPD 9
DR++E +PD
Sbjct: 8 DRMEEPLPD 16
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 3 LQEGVPD 9
LQ+G+PD
Sbjct: 484 LQQGLPD 490
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 3 LQEGVPD 9
LQ+G+PD
Sbjct: 484 LQQGLPD 490
>sp|VEMP_SARS|ENVELOPE small membrane protein|Severe acute respiratory syndrome
Query: 5 EGVPD 9
EGVPD
Sbjct: 69 EGVPD 73
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 DRLQEGV 7
+RLQ+GV
Sbjct: 597 ERLQQGV 603
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 RLQEGV 7
RLQEGV
Sbjct: 2009 RLQEGV 2014
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 LQEGVP 8
L+EGVP
Sbjct: 1265 LEEGVP 1270
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 EGVPDT 10
EGVP+T
Sbjct: 1400 EGVPET 1405
>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DRLQEGVPD 9
+ LQEG PD
Sbjct: 416 EYLQEGGPD 424
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 3 LQEGVPD 9
LQ G+PD
Sbjct: 468 LQNGLPD 474
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 5 EGVPD 9
EG+PD
Sbjct: 887 EGIPD 891
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 3 LQEGVPD 9
LQ G+PD
Sbjct: 451 LQNGLPD 457
>sp|M2_I30A0|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 5 EGVPDT 10
EGVPD+
Sbjct: 66 EGVPDS 71
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 3 LQEGVPD 9
LQ G+PD
Sbjct: 453 LQNGLPD 459
>sp|VE2_HPV61|REGULATORY protein E2|Human papillomavirus type 61
Query: 2 RLQEGVPD 9
RLQ VP+
Sbjct: 318 RLQHSVPE 325
180|Sequence|896|905|GVPDTIATLR
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 GVPDTIATL 9
GVP+TI L
Sbjct: 1401 GVPETIVKL 1409
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 1 GVPDTIA 7
GVPDT+
Sbjct: 489 GVPDTLG 495
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 1 GVPDTIA 7
GVPDT+
Sbjct: 489 GVPDTLG 495
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 GVPDTI 6
GVPD+I
Sbjct: 702 GVPDSI 707
>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)
Query: 1 GVPDTIAT 8
G+PDT T
Sbjct: 168 GLPDTFIT 175
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 3 PDTIATLR 10
PD +AT++
Sbjct: 1981 PDEVATVK 1988
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PDTIATL 9
PD++AT+
Sbjct: 298 PDSVATV 304
181|Sequence|901|910|IATLREAGIQ
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 IATLREAGI 9
I T+REAGI
Sbjct: 2466 ITTIREAGI 2474
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 IATLREAGI 9
+ T+REAGI
Sbjct: 2466 VTTVREAGI 2474
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 IATLREAGI 9
+ T+REAGI
Sbjct: 2465 VKTVREAGI 2473
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 IATLREAGI 9
+ T+REAGI
Sbjct: 2465 VKTVREAGI 2473
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 ATLREAGIQ 10
ATL+EA I+
Sbjct: 1150 ATLKEAAIE 1158
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 IATLREAGI 9
+ T+REAGI
Sbjct: 2462 VRTVREAGI 2470
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 IATLREAGI 9
+ T+REAG+
Sbjct: 2464 VTTVREAGV 2472
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 IATLREAGI 9
+ T+REAG+
Sbjct: 2464 VTTVREAGV 2472
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 IATLREAGI 9
+ T+REAG+
Sbjct: 2464 VTTVREAGV 2472
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 IATLREAGI 9
+ T+REAG+
Sbjct: 2464 VTTVREAGV 2472
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 ATLREAGIQ 10
ATL+EA ++
Sbjct: 1149 ATLKEAAVE 1157
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 ATLREAGIQ 10
ATL+EA ++
Sbjct: 1150 ATLKEAAVE 1158
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 ATLREAGIQ 10
ATL+EA ++
Sbjct: 1149 ATLKEAAVE 1157
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 ATLREAGIQ 10
ATL+EA ++
Sbjct: 1149 ATLKEAAVE 1157
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 ATLREAGIQ 10
ATL+EA ++
Sbjct: 1149 ATLKEASVE 1157
>sp|YEC4_EBVB9|UNCHARACTERIZED protein EC-RF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 IATLREAGIQ 10
+ TLR AG++
Sbjct: 259 VQTLRRAGVE 268
182|Sequence|906|915|EAGIQLWVLT
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 EAGIQLWVLT 10
+AG +WV T
Sbjct: 6084 QAGFNIWVPT 6093
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 EAGIQLWV 8
+AG +WV
Sbjct: 6059 QAGFNIWV 6066
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 AGIQLWVLT 10
AG+ LW+ +
Sbjct: 550 AGLSLWMCS 558
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 AGIQLWVLT 10
AG+ LW+ +
Sbjct: 550 AGLSLWMCS 558
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 2 AGIQLWVLT 10
AG+ LW+ +
Sbjct: 550 AGLSLWMCS 558
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 2 AGIQLWVLT 10
AG+ LW+ +
Sbjct: 549 AGLSLWMCS 557
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 AGIQLWVLT 10
AG+ LW+ +
Sbjct: 550 AGLSLWMCS 558
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 AGIQLWVLT 10
AG+ LW+ +
Sbjct: 542 AGLSLWMCS 550
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 AGIQLWVLT 10
AG+ LW+ +
Sbjct: 550 AGLSLWMCS 558
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 AGIQLWVLT 10
AG+ LW+ +
Sbjct: 550 AGLSLWMCS 558
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 AGIQLWVLT 10
AG+ LW+ +
Sbjct: 550 AGLSLWMCS 558
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 AGIQLWVLT 10
AG+ LW+ +
Sbjct: 550 AGLSLWMCS 558
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 AGIQLWVLT 10
AG+ LW+ +
Sbjct: 539 AGLSLWMCS 547
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 AGIQLWVLT 10
AG+ LW+ +
Sbjct: 539 AGLSLWMCS 547
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 AGIQLWVLT 10
AG+ LW+ +
Sbjct: 539 AGLSLWMCS 547
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 AGIQLWVLT 10
AG+ LW+ +
Sbjct: 539 AGLSLWMCS 547
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 AGIQLWVLT 10
AG+ LW+ +
Sbjct: 550 AGLSLWMCS 558
>sp|GI_HHV11|ENVELOPE glycoprotein I|Human herpesvirus 1 (strain 17)
Query: 1 EAGIQLW 7
+ G++LW
Sbjct: 71 DGGVELW 77
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 2 AGIQLWV 8
AG+ LW+
Sbjct: 548 AGLSLWM 554
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 4 IQLWVL 9
IQ+W++
Sbjct: 172 IQIWIM 177
>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12
Query: 1 EAGIQLWVL 9
E G++ W L
Sbjct: 342 EKGVRSWTL 350
183|Sequence|911|920|LWVLTGDKQE
>sp|PG108_VAR67|ENVELOPE protein H3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LWVLTG 6
LW LTG
Sbjct: 313 LWFLTG 318
>sp|PG108_VACCC|ENVELOPE protein H3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LWVLTG 6
LW LTG
Sbjct: 312 LWFLTG 317
>sp|PG108_MONPV|ENVELOPE protein OPG108|Monkeypox virus (MPXV)
Query: 1 LWVLTG 6
LW LTG
Sbjct: 312 LWFLTG 317
>sp|C10_VAR67|PROTEIN C10|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 WVLTGDKQ 9
+VLTGD +
Sbjct: 305 YVLTGDTE 312
>sp|C10_VACCC|PROTEIN C10|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 WVLTGDKQ 9
+VLTGD +
Sbjct: 306 YVLTGDTE 313
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 2 WVLTGD 7
W +TGD
Sbjct: 261 WYITGD 266
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 2 WVLTGD 7
W +TGD
Sbjct: 261 WYITGD 266
>sp|C10_VACCA|PROTEIN C10|Vaccinia virus (strain Ankara) (VACV)
Query: 2 WVLTGDKQ 9
+VLTGD +
Sbjct: 301 YVLTGDTE 308
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 2 WVLTGD 7
W +TGD
Sbjct: 264 WYVTGD 269
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 WVLTGD 7
+VLTGD
Sbjct: 3434 YVLTGD 3439
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 WVLTGD 7
+VLTGD
Sbjct: 3454 YVLTGD 3459
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 WVLTGD 7
+VLTGD
Sbjct: 3484 YVLTGD 3489
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 WVLTGD 7
+VLTGD
Sbjct: 3434 YVLTGD 3439
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 WVLTGD 7
+VLTGD
Sbjct: 3454 YVLTGD 3459
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 WVLTGD 7
+VLTGD
Sbjct: 3484 YVLTGD 3489
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 WVLTGDK 8
W+ TG+K
Sbjct: 54 WLTTGNK 60
>sp|GN_EBVG|ENVELOPE glycoprotein N|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 WVLTG 6
W+LTG
Sbjct: 22 WLLTG 26
>sp|GN_EBVB9|ENVELOPE glycoprotein N|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 WVLTG 6
W+LTG
Sbjct: 22 WLLTG 26
>sp|GN_EBVA8|ENVELOPE glycoprotein N|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 WVLTG 6
W+LTG
Sbjct: 22 WLLTG 26
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 4 LTGDKQE 10
+T DKQE
Sbjct: 526 ITNDKQE 532
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 LWVLTGDKQE 10
+W+ GD Q+
Sbjct: 2370 MWLRDGDFQD 2379
184|Sequence|916|925|GDKQETAVNI
***** No hits found ******
185|Sequence|921|930|TAVNIAHSCR
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 TAVNIAHS 8
TAVN+ HS
Sbjct: 1748 TAVNVTHS 1755
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 TAVNIAHS 8
TAVN+ HS
Sbjct: 1748 TAVNVTHS 1755
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 TAVNIAHS 8
TAVN+ HS
Sbjct: 1744 TAVNVTHS 1751
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 TAVNIAHS 8
TAVN+ HS
Sbjct: 140 TAVNLLHS 147
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 3 VNIAHSCR 10
+NI H C+
Sbjct: 567 INIKHDCK 574
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 TAVNIAHSC 9
TAV I SC
Sbjct: 1062 TAVKIDQSC 1070
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 4 NIAHSC 9
+I+HSC
Sbjct: 430 DISHSC 435
>sp|BEL1_SFV3L|PROTEIN Bel-1|Simian foamy virus type 3
Query: 4 NIAHSCR 10
++ H+CR
Sbjct: 171 SVVHTCR 177
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 1 TAVNIAHS 8
+A+N+ HS
Sbjct: 318 SAINLQHS 325
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 VNIAHS 8
VNIAH+
Sbjct: 2657 VNIAHA 2662
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 VNIAHS 8
VNIAH+
Sbjct: 2687 VNIAHA 2692
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 VNIAHS 8
VNIAH+
Sbjct: 2637 VNIAHA 2642
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 VNIAHS 8
VNIAH+
Sbjct: 2657 VNIAHA 2662
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 VNIAHS 8
VNIAH+
Sbjct: 2687 VNIAHA 2692
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 VNIAHS 8
VNIAH+
Sbjct: 2637 VNIAHA 2642
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 VNIAHSCR 10
+ +AH CR
Sbjct: 1192 IYLAHFCR 1199
186|Sequence|926|935|AHSCRLLNQT
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 HSCRLL 7
H CRLL
Sbjct: 860 HLCRLL 865
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 HSCRLL 7
H CRLL
Sbjct: 865 HLCRLL 870
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 SCRLLNQ 9
SCRLL +
Sbjct: 6265 SCRLLQR 6271
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 SCRLLNQ 9
SCRLL +
Sbjct: 6295 SCRLLQR 6301
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 SCRLLNQ 9
SCRLL +
Sbjct: 6245 SCRLLQR 6251
>sp|UL142_HCMVM|MEMBRANE glycoprotein UL142|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HSCRLLNQT 10
H+C L N T
Sbjct: 126 HTCDLTNST 134
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 2 HSCRLL 7
HSC LL
Sbjct: 384 HSCPLL 389
>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United
Query: 3 SCRLLNQT 10
+C L+N+T
Sbjct: 139 ACNLVNET 146
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 SCRLLNQT 10
SC +NQT
Sbjct: 550 SCVTINQT 557
187|Sequence|931|940|LLNQTDTVYT
>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 QTDTVY 9
+TDTVY
Sbjct: 48 KTDTVY 53
>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 QTDTVY 9
+TDTVY
Sbjct: 48 KTDTVY 53
>sp|K1_HHV8P|PROTEIN K1|Human herpesvirus 8 type P
Query: 1 LLNQTDTVY 9
L+NQT+ Y
Sbjct: 147 LMNQTEGCY 155
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 NQTDTVYT 10
N T+T+YT
Sbjct: 629 NYTNTIYT 636
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 NQTDTVYT 10
N T+T+YT
Sbjct: 636 NYTNTIYT 643
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 2 LNQTDTVYT 10
LN+ D +YT
Sbjct: 495 LNKDDGMYT 503
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 LNQTDTVYT 10
LN+ D +YT
Sbjct: 495 LNKDDGMYT 503
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 2 LNQTDTVYT 10
LN+ D +YT
Sbjct: 495 LNKDDGMYT 503
>sp|HEMA_I82A2|HEMAGGLUTININ A virus (strain A/Camel/Mongolia/1982
Query: 3 NQTDTVYT 10
N TDTV T
Sbjct: 8 NSTDTVDT 15
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 NQTDTVYT 10
N TDTV T
Sbjct: 28 NSTDTVDT 35
188|Sequence|936|945|DTVYTINTEN
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 1 DTVYTINTEN 10
D VYT+N EN
Sbjct: 598 DPVYTLNNEN 607
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 1 DTVYTINTEN 10
D VYT+N EN
Sbjct: 598 DPVYTLNNEN 607
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 DTVYTINTEN 10
D VYT+ EN
Sbjct: 2137 DVVYTLLNEN 2146
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 DTVYTINTEN 10
D VYT+ EN
Sbjct: 2137 DVVYTLLNEN 2146
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 1 DTVYTINTEN 10
+ VYT+N EN
Sbjct: 585 NAVYTLNDEN 594
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 1 DTVYTI 6
DT+YTI
Sbjct: 168 DTIYTI 173
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 1 DTVYTI 6
DT+YTI
Sbjct: 164 DTIYTI 169
>sp|A49_VACCC|PROTEIN A49|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DTVYTI 6
DTVYTI
Sbjct: 66 DTVYTI 71
>sp|A49_VACCA|PROTEIN A49|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DTVYTI 6
DTVYTI
Sbjct: 66 DTVYTI 71
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 1 DTVYTINTE 9
D YT NTE
Sbjct: 476 DPAYTNNTE 484
>sp|A49_VARV|PROTEIN A49|Variola virus
Query: 1 DTVYTI 6
DTVYTI
Sbjct: 66 DTVYTI 71
>sp|A49_VAR67|PROTEIN A49|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DTVYTI 6
DTVYTI
Sbjct: 66 DTVYTI 71
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 1 DTVYTINT 8
+ YTINT
Sbjct: 127 NCTYTINT 134
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 1 DTVYTINT 8
+ YTINT
Sbjct: 127 NCTYTINT 134
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 1 DTVYTINT 8
+ YTINT
Sbjct: 127 NCTYTINT 134
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 DTVYTINTEN 10
DT+Y I +N
Sbjct: 352 DTIYAIGGQN 361
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 DTVYTINTEN 10
DT+Y I +N
Sbjct: 352 DTIYAIGGQN 361
>sp|UL142_HCMVM|MEMBRANE glycoprotein UL142|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DTVYTINTEN 10
+T+Y I++EN
Sbjct: 97 ETLYNIDSEN 106
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 DTVYTINTEN 10
DT+Y I +N
Sbjct: 342 DTIYAIGGQN 351
189|Sequence|941|950|INTENQETCE
>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)
Query: 3 TENQETC 9
T+NQETC
Sbjct: 233 TDNQETC 239
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 NTENQETC 9
N NQE C
Sbjct: 1176 NPRNQEVC 1183
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 NTENQET 8
NT NQE+
Sbjct: 560 NTNNQES 566
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 5 NQETC 9
NQETC
Sbjct: 240 NQETC 244
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 NQETC 9
NQETC
Sbjct: 240 NQETC 244
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 1 INTENQETCE 10
INT Q C+
Sbjct: 143 INTSCQSNCQ 152
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 INTENQETC 9
INT++ E C
Sbjct: 1033 INTKHDELC 1041
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 INTENQETC 9
INT++ E C
Sbjct: 1033 INTKHDELC 1041
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 NTENQET 8
+T NQET
Sbjct: 1890 HTSNQET 1896
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 INTENQETC 9
INT++ E C
Sbjct: 1033 INTKHDELC 1041
190|Sequence|946|955|QETCESILNC
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 ETCESILNC 10
+TC LNC
Sbjct: 564 DTCPLTLNC 572
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 2 ETCESILNC 10
+ CESI NC
Sbjct: 172 QDCESIKNC 180
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 CESILNC 10
CE+I++C
Sbjct: 276 CETIVSC 282
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 CESILNC 10
CE+I++C
Sbjct: 276 CETIVSC 282
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 CESILNC 10
CE+I++C
Sbjct: 276 CETIVSC 282
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 CESILNC 10
CE+I++C
Sbjct: 276 CETIVSC 282
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 QETCESILN 9
+E C+ I+N
Sbjct: 745 KENCQEIMN 753
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 QETCESILN 9
+E C+ I+N
Sbjct: 745 KENCQEIMN 753
>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45
Query: 1 QETCESILN 9
Q+TCE + N
Sbjct: 101 QDTCEELWN 109
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 1 QETCESILN 9
Q+TCE + N
Sbjct: 99 QDTCEELWN 107
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 QETCESILN 9
+E C+ I+N
Sbjct: 748 KENCQEIVN 756
Query: 4 CESILNC 10
C++I++C
Sbjct: 277 CDTIVSC 283
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 QETCESILN 9
+E C+ I+N
Sbjct: 744 KENCQEIVN 752
Query: 4 CESILNC 10
C++I++C
Sbjct: 274 CDTIVSC 280
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 4 CESILNC 10
C++I++C
Sbjct: 276 CDTIVSC 282
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 QETCESILN 9
+ C S+LN
Sbjct: 315 RRACNSVLN 323
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 4 CESILNC 10
C++I++C
Sbjct: 274 CDTIVSC 280
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169)
Query: 2 ETCESILNC 10
E CE + C
Sbjct: 21 ERCEDAIRC 29
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 ETCESILNC 10
E CE + C
Sbjct: 21 ERCEDAIRC 29
191|Sequence|951|960|SILNCALEEL
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 1 SILNCALE 8
++LNCALE
Sbjct: 295 NLLNCALE 302
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 1 SILNCALE 8
++LNCALE
Sbjct: 295 NLLNCALE 302
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 1 SILNCALEEL 10
++LNCA+ +L
Sbjct: 229 TLLNCAVTKL 238
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)
Query: 1 SILNCALEEL 10
++LNCA+ +L
Sbjct: 229 TLLNCAVTKL 238
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SILNCALE 8
SI+NCA++
Sbjct: 351 SIVNCAVK 358
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SILNCALE 8
SI+NCA++
Sbjct: 351 SIVNCAVK 358
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SILNCALE 8
SI+NCA++
Sbjct: 351 SIVNCAVK 358
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 ILNCALEEL 10
I++CA+E L
Sbjct: 1477 IVSCAIEAL 1485
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 ILNCALEEL 10
I++CA+E L
Sbjct: 1477 IVSCAIEAL 1485
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 ILNCAL 7
+LNCAL
Sbjct: 2756 LLNCAL 2761
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 ILNCAL 7
+LNCAL
Sbjct: 2756 LLNCAL 2761
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 3 LNCALEEL 10
+NC +EE+
Sbjct: 275 VNCIIEEV 282
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LNCALEEL 10
+NC +EE+
Sbjct: 275 VNCIIEEV 282
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 1 SILNCALEEL 10
+ +NC +EE+
Sbjct: 248 TTVNCIVEEV 257
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 1 SILNCALEEL 10
+ +NC +EE+
Sbjct: 262 TTVNCIVEEV 271
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 1 SILNCALEEL 10
+ +NC +EE+
Sbjct: 262 TTVNCIVEEV 271
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 1 SILNCALEEL 10
+ +NC +EE+
Sbjct: 267 TTVNCIVEEV 276
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 1 SILNCALEEL 10
+ +NC +EE+
Sbjct: 267 TTVNCIVEEV 276
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 1 SILNCALEEL 10
+ +NC +EE+
Sbjct: 266 TTVNCIVEEV 275
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 1 SILNCALEEL 10
+ +NC +EE+
Sbjct: 267 TTVNCIVEEV 276
>sp|UL20_HCMVA|UNCHARACTERIZED protein UL20|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SILNCALEE 9
++L C L+E
Sbjct: 200 AVLTCGLQE 208
>sp|UL20_HCMVM|MEMBRANE protein UL20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SILNCALEE 9
++L C L+E
Sbjct: 198 AVLTCGLQE 206
192|Sequence|956|965|ALEELKQFRE
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 1 ALEELKQ 7
AL+ELKQ
Sbjct: 11 ALDELKQ 17
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 1 ALEELKQ 7
AL+ELKQ
Sbjct: 11 ALDELKQ 17
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 EELKQFRE 10
+ LKQ+RE
Sbjct: 723 KRLKQYRE 730
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LEELKQF 8
LEELKQ
Sbjct: 58 LEELKQL 64
>sp|VME1_SARS|MEMBRANE protein|Severe acute respiratory syndrome coronavirus
Query: 2 LEELKQFRE 10
+EELKQ E
Sbjct: 9 VEELKQLLE 17
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 EELKQFRE 10
+ELKQ+++
Sbjct: 174 DELKQYKD 181
193|Sequence|961|970|KQFRELQKPD
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 KQFRELQ 7
KQ+REL+
Sbjct: 726 KQYRELK 732
>sp|VP24_EBOZM|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 5 ELQKPD 10
ELQ+PD
Sbjct: 200 ELQEPD 205
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 QFRELQKPD 10
+ +ELQ PD
Sbjct: 1814 RIKELQNPD 1822
>sp|VP24_EBOG4|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 5 ELQKPD 10
ELQ+PD
Sbjct: 200 ELQEPD 205
>sp|VP24_EBOZ5|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 5 ELQKPD 10
ELQ+PD
Sbjct: 200 ELQEPD 205
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 KQFRELQ 7
KQF +LQ
Sbjct: 478 KQFEQLQ 484
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 KQFRELQ 7
KQF +LQ
Sbjct: 478 KQFEQLQ 484
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 KQFRELQ 7
KQF +LQ
Sbjct: 478 KQFEQLQ 484
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 1 KQFRELQK 8
K+F EL+K
Sbjct: 412 KEFDELEK 419
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 ELQKPD 10
+LQKPD
Sbjct: 240 DLQKPD 245
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 ELQKPD 10
+LQKPD
Sbjct: 240 DLQKPD 245
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 ELQKPD 10
+LQKPD
Sbjct: 240 DLQKPD 245
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 1 KQFREL 6
KQF+EL
Sbjct: 643 KQFKEL 648
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 1 KQFREL 6
KQF+EL
Sbjct: 643 KQFKEL 648
194|Sequence|966|975|LQKPDRKLFG
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 LQKPDRKLFG 10
+ KPDR+L G
Sbjct: 341 VHKPDRELTG 350
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LQKPDRKL 8
LQKPD+ L
Sbjct: 241 LQKPDKAL 248
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LQKPDRKL 8
LQKPD+ L
Sbjct: 241 LQKPDKAL 248
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LQKPDRKL 8
LQKPD+ L
Sbjct: 241 LQKPDKAL 248
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 4 PDRKLFG 10
P+R++FG
Sbjct: 31 PERRIFG 37
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 4 PDRKLFG 10
P+R++FG
Sbjct: 31 PERRIFG 37
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 2 QKPDRKLF 9
KP R+LF
Sbjct: 105 HKPKRRLF 112
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 LQKPDRKLFG 10
+ KPDR+ G
Sbjct: 89 IAKPDRRGLG 98
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 2 QKPDRK 7
Q PDRK
Sbjct: 267 QSPDRK 272
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 2 QKPDRK 7
Q PDRK
Sbjct: 267 QSPDRK 272
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 1 LQKPDRKLF 9
L PD++LF
Sbjct: 302 LVSPDKELF 310
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 LQKPDRKLFG 10
L+K R +FG
Sbjct: 2257 LEKTKRDIFG 2266
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LQKPDRKLF 9
+Q PD+K +
Sbjct: 200 IQNPDQKAY 208
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LQKPDRKLF 9
+Q PD+K +
Sbjct: 200 IQNPDQKAY 208
195|Sequence|971|980|RKLFGFRLPS
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 3 LFGFRLPS 10
LFG +LP+
Sbjct: 239 LFGIKLPA 246
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 LFGFRLPS 10
LFG +LP+
Sbjct: 239 LFGIKLPA 246
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LFGFRLPS 10
LFG +LP+
Sbjct: 239 LFGIKLPA 246
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 3 LFGFRLPS 10
LFG +LP+
Sbjct: 239 LFGIKLPA 246
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 FGFRLPS 10
FGF +PS
Sbjct: 19 FGFAIPS 25
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 FGFRLPS 10
FGF +PS
Sbjct: 19 FGFAIPS 25
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 3 LFGFRLPS 10
LF F LPS
Sbjct: 93 LFAFFLPS 100
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 RKLFGF 6
R+LFGF
Sbjct: 118 RELFGF 123
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 KLFGFRLP 9
+L+G RLP
Sbjct: 699 RLYGRRLP 706
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LFGFRLP 9
L GF+LP
Sbjct: 278 LVGFQLP 284
>sp|NCAP_BUNLC|NUCLEOPROTEIN La Crosse
Query: 4 FGFRLP 9
FG RLP
Sbjct: 230 FGIRLP 235
>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United
Query: 4 FGFRLP 9
FG RLP
Sbjct: 230 FGIRLP 235
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 3 LFGFRLP 9
L GF+LP
Sbjct: 278 LVGFQLP 284
>sp|NCAP_BUNSH|NUCLEOPROTEIN snowshoe hare
Query: 4 FGFRLP 9
FG RLP
Sbjct: 230 FGIRLP 235
196|Sequence|976|985|FRLPSKTPSI
>sp|VME1_CVHN1|MEMBRANE protein|Human coronavirus HKU1 (isolate N1)
Query: 1 FRLPSKTPS 9
+RLPS PS
Sbjct: 206 YRLPSSKPS 214
>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto
Query: 3 LPSKTPSI 10
LP TPSI
Sbjct: 464 LPDMTPSI 471
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 3 LPSKTPSI 10
LP TPSI
Sbjct: 464 LPDMTPSI 471
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 3 LPSKTPSI 10
LP TPSI
Sbjct: 464 LPDMTPSI 471
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 3 LPSKTPSI 10
LP TPSI
Sbjct: 464 LPDMTPSI 471
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 3 LPSKTPSI 10
LP TPSI
Sbjct: 464 LPDMTPSI 471
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 3 LPSKTPSI 10
LP TPSI
Sbjct: 464 LPDMTPSI 471
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 LPSKTPSI 10
LP+K PS+
Sbjct: 1554 LPNKKPSV 1561
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 PSKTPS 9
PS+TPS
Sbjct: 1842 PSRTPS 1847
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 2 RLPSKTP 8
R P KTP
Sbjct: 443 RCPDKTP 449
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 3 LPSKTP 8
LP KTP
Sbjct: 383 LPQKTP 388
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 PSKTPS 9
PS+TPS
Sbjct: 354 PSRTPS 359
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PSKTPS 9
PS+TPS
Sbjct: 354 PSRTPS 359
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 PSKTPS 9
PS+TPS
Sbjct: 354 PSRTPS 359
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 FRLPSKT 7
FRLP K
Sbjct: 525 FRLPKKV 531
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 FRLPSKT 7
FRLP K
Sbjct: 525 FRLPKKV 531
197|Sequence|981|990|KTPSITSEAV
***** No hits found ******
198|Sequence|986|995|TSEAVVPEAG
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TSEAVVPEAG 10
T+EA++PE G
Sbjct: 448 TTEAILPEYG 457
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TSEAVVPEAG 10
T+EA++PE G
Sbjct: 448 TTEAILPEYG 457
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TSEAVVPEAG 10
T+EA++PE G
Sbjct: 448 TAEAILPEYG 457
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TSEAVVPEAG 10
T+EA++PE G
Sbjct: 448 TAEAILPEYG 457
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TSEAVVPEAG 10
T EA++PE G
Sbjct: 448 TVEAILPEYG 457
>sp|UL56_HHV11|PROTEIN UL56|Human herpesvirus 1 (strain 17)
Query: 2 SEAVVPEAG 10
SEA P+AG
Sbjct: 3 SEAAQPDAG 11
199|Sequence|991|1000|VPEAGLVIDG
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 3 EAGLVIDG 10
EAG ++DG
Sbjct: 199 EAGKIVDG 206
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 VPEAGL 6
+PEAGL
Sbjct: 606 IPEAGL 611
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 5 GLVIDG 10
GL+IDG
Sbjct: 101 GLIIDG 106
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VPEAGLVIDG 10
+P AGL+ G
Sbjct: 27 IPNAGLIAAG 36
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 2 PEAGLVI 8
PE+GL++
Sbjct: 17 PESGLIL 23
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 VPEAGLVIDG 10
+PE GL+ G
Sbjct: 871 LPEKGLITYG 880
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PEAGLVI 8
PEAGL +
Sbjct: 156 PEAGLEV 162
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PEAGLVI 8
PEAGL +
Sbjct: 156 PEAGLEV 162
>sp|NSP3_ROTGA|NON-STRUCTURAL protein 3|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 4 AGLVID 9
AGLV+D
Sbjct: 265 AGLVVD 270
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VPEAGLVID 9
V +AG +ID
Sbjct: 541 VSQAGCIID 549
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 5 GLVIDG 10
G++IDG
Sbjct: 1203 GIIIDG 1208
200|Sequence|996|1005|LVIDGKTLNA
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 VIDGKTLNA 10
VID + LNA
Sbjct: 123 VIDRRALNA 131
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 4 DGKTLNA 10
+GKT+NA
Sbjct: 325 NGKTINA 331
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 4 DGKTLNA 10
+GKT+NA
Sbjct: 328 NGKTINA 334
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 VIDGKT 7
VIDG+T
Sbjct: 1917 VIDGRT 1922
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 VIDGKT 7
VIDG+T
Sbjct: 1917 VIDGRT 1922
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 VIDGKT 7
VIDG+T
Sbjct: 1917 VIDGRT 1922
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 VIDGKT 7
VIDG+T
Sbjct: 1918 VIDGRT 1923
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 VIDGKT 7
VIDG+T
Sbjct: 1917 VIDGRT 1922
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 VIDGKT 7
VIDG+T
Sbjct: 1917 VIDGRT 1922
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 VIDGKT 7
VIDG+T
Sbjct: 1917 VIDGRT 1922
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 VIDGKT 7
VIDG+T
Sbjct: 1917 VIDGRT 1922
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 VIDGKT 7
VIDG+T
Sbjct: 1919 VIDGRT 1924
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 VIDGKT 7
VIDG+T
Sbjct: 1919 VIDGRT 1924
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 VIDGKTLNA 10
+ID + LNA
Sbjct: 123 IIDRRALNA 131
>sp|PG001_VACCL|CHEMOKINE-BINDING protein|Vaccinia virus (strain Lister) (VACV)
Query: 4 DGKTLNA 10
DG T+NA
Sbjct: 124 DGNTVNA 130
>sp|PG001_VACCC|INACTIVE chemokine-binding protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 DGKTLNA 10
DG T+NA
Sbjct: 110 DGNTVNA 116
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 LVIDGKTL 8
++ DGKTL
Sbjct: 813 VLTDGKTL 820
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 LVIDGKTL 8
++ DGKTL
Sbjct: 813 VLTDGKTL 820
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 LVIDGKTL 8
++ DGKTL
Sbjct: 813 VLTDGKTL 820
201|Sequence|1001|1010|KTLNAIFQGK
>sp|YVAE_VACCC|UNCHARACTERIZED 18.2 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LNAIFQGK 10
LNA+F G+
Sbjct: 116 LNALFSGE 123
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 KTLNAIFQ 8
+ LNAIF+
Sbjct: 862 RELNAIFE 869
>sp|YVEB_VACCC|UNCHARACTERIZED 11.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KTLNAIF 7
K+LN+IF
Sbjct: 30 KSLNSIF 36
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 3 LNAIFQGK 10
L++IF+GK
Sbjct: 239 LSSIFRGK 246
202|Sequence|1006|1015|IFQGKLEKKF
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 QGKLEKK 9
QG+LEK+
Sbjct: 801 QGRLEKQ 807
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 3 QGKLEKK 9
QG+LEK+
Sbjct: 800 QGRLEKQ 806
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 IFQGKLEKKF 10
+ GKL+K+F
Sbjct: 1365 LIPGKLKKRF 1374
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 IFQGKLEKKF 10
+ GKL+K+F
Sbjct: 1338 LIPGKLKKRF 1347
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 IFQGKLEKKF 10
+ GKL+K+F
Sbjct: 1343 LIPGKLKKRF 1352
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 QGKLEKK 9
+GKLEK+
Sbjct: 546 EGKLEKE 552
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 QGKLEKK 9
+GKLEK+
Sbjct: 546 EGKLEKE 552
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 QGKLEKK 9
+GKLEK+
Sbjct: 546 EGKLEKE 552
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 IFQGKLEKKF 10
+FQGK K
Sbjct: 1351 VFQGKFNYKL 1360
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GKLEKKF 10
GKL K+F
Sbjct: 358 GKLRKQF 364
>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain
Query: 2 FQGKLE 7
F+GKLE
Sbjct: 100 FRGKLE 105
203|Sequence|1011|1020|LEKKFLELTQ
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EKKFLELTQ 10
EKK LEL +
Sbjct: 657 EKKLLELDE 665
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 KKFLELT 9
KKF E+T
Sbjct: 1115 KKFTEMT 1121
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 KKFLELT 9
KKF E+T
Sbjct: 1114 KKFTEMT 1120
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 KKFLELT 9
KKF E+T
Sbjct: 1116 KKFTEMT 1122
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 KKFLELT 9
KKF E+T
Sbjct: 1114 KKFTEMT 1120
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 KKFLELT 9
KKF E+T
Sbjct: 1124 KKFTEMT 1130
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 KKFLELT 9
KKF E+T
Sbjct: 1112 KKFTEMT 1118
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 KKFLELT 9
KKF E+T
Sbjct: 1117 KKFTEMT 1123
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 KKFLELT 9
KKF E+T
Sbjct: 1105 KKFTEMT 1111
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 KKFLELT 9
KKF E+T
Sbjct: 1105 KKFTEMT 1111
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 KKFLELT 9
KKF E+T
Sbjct: 1106 KKFTEMT 1112
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 KKFLELT 9
KKF E+T
Sbjct: 1104 KKFTEMT 1110
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 KKFLELT 9
KKF E+T
Sbjct: 1104 KKFTEMT 1110
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 KKFLELT 9
KKF E+T
Sbjct: 1106 KKFTEMT 1112
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 KKFLELT 9
KKF E+T
Sbjct: 1106 KKFTEMT 1112
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 KKFLELT 9
KKF E+T
Sbjct: 1108 KKFTEMT 1114
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 KKFLELT 9
KKF E+T
Sbjct: 1103 KKFTEMT 1109
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 KKFLELT 9
KKF E+T
Sbjct: 1122 KKFTEMT 1128
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 LEKKFLELTQ 10
EKKF+E T
Sbjct: 112 FEKKFIEDTN 121
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LEKKFLELT 9
L K F ELT
Sbjct: 318 LAKSFFELT 326
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LEKKFLELT 9
L K F ELT
Sbjct: 318 LAKSFFELT 326
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LEKKFLELT 9
L K F ELT
Sbjct: 318 LAKSFFELT 326
>sp|NEC2_HHV7J|NUCLEAR egress protein 2|Human herpesvirus 7 (strain JI)
Query: 1 LEKKFLE 7
L+KKFLE
Sbjct: 165 LKKKFLE 171
204|Sequence|1016|1025|LELTQYCRSV
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 ELTQYCRS 9
EL QYCR+
Sbjct: 74 ELEQYCRA 81
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 ELTQYCRS 9
EL QYCR+
Sbjct: 74 ELEQYCRA 81
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 ELTQYCRS 9
EL QYCR+
Sbjct: 74 ELEQYCRA 81
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 ELTQYCRS 9
EL QYCR+
Sbjct: 74 ELEQYCRA 81
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 ELTQYCR 8
E+ QYCR
Sbjct: 1472 EVRQYCR 1478
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 ELTQYCR 8
E+ QYCR
Sbjct: 1472 EVRQYCR 1478
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 ELTQYCR 8
E+ QYCR
Sbjct: 1472 EVRQYCR 1478
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 ELTQYCR 8
E+ QYCR
Sbjct: 1472 EVRQYCR 1478
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 ELTQYCR 8
E+ QYCR
Sbjct: 1472 EVRQYCR 1478
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LELTQYCRS 9
L++TQ CR+
Sbjct: 292 LKVTQLCRN 300
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 TQYCR 8
TQYCR
Sbjct: 2965 TQYCR 2969
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 TQYCR 8
TQYCR
Sbjct: 2965 TQYCR 2969
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 3 LTQYC 7
LTQYC
Sbjct: 256 LTQYC 260
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 LTQYCRSV 10
LT YC SV
Sbjct: 1675 LTAYCLSV 1682
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 3 LTQYC 7
LTQYC
Sbjct: 253 LTQYC 257
>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 LELTQYCRS 9
L+LTQY S
Sbjct: 241 LDLTQYMNS 249
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 ELTQYCR 8
E T YCR
Sbjct: 913 EATYYCR 919
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 2 ELTQYCRSV 10
ELTQ C+ +
Sbjct: 144 ELTQRCKQL 152
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 2 ELTQYCR 8
ELTQ C+
Sbjct: 144 ELTQRCK 150
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 LELTQYCRSV 10
L++T YC V
Sbjct: 434 LDITVYCNGV 443
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 TQYCR 8
T+YCR
Sbjct: 2692 TKYCR 2696
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 TQYCR 8
T+YCR
Sbjct: 2692 TKYCR 2696
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 LTQYCRS 9
L QYC++
Sbjct: 243 LIQYCKN 249
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 TQYCR 8
T+YCR
Sbjct: 2666 TRYCR 2670
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 TQYCR 8
T+YCR
Sbjct: 2666 TRYCR 2670
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 ELTQYC 7
+LT+YC
Sbjct: 669 DLTKYC 674
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 ELTQYC 7
+LT+YC
Sbjct: 669 DLTKYC 674
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 ELTQYC 7
+LT+YC
Sbjct: 669 DLTKYC 674
205|Sequence|1021|1030|YCRSVLCCRS
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 CRSVLC 7
CR VLC
Sbjct: 1652 CRDVLC 1657
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 2 CRSVLC 7
CRS+LC
Sbjct: 380 CRSMLC 385
>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 SVLCC 8
SVLCC
Sbjct: 68 SVLCC 72
>sp|PP71_HCMVA|PROTEIN pp71|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 SVLCC 8
SVLCC
Sbjct: 68 SVLCC 72
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 YCRSVLC 7
YC VLC
Sbjct: 2699 YCVKVLC 2705
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 RSVLCCR 9
R V CCR
Sbjct: 226 RGVYCCR 232
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CRSVLCCRS 10
CR VLC R
Sbjct: 203 CRDVLCFRD 211
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 RSVLCCR 9
R V CCR
Sbjct: 226 RGVYCCR 232
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 2 CRSVLCCRS 10
CR VLC R
Sbjct: 216 CRDVLCFRD 224
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 RSVLCCR 9
R V CCR
Sbjct: 226 RGVYCCR 232
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 RSVLCCR 9
R V CCR
Sbjct: 226 RGVYCCR 232
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 CRSVLCCR 9
C SV+C R
Sbjct: 1612 CGSVVCSR 1619
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 2 CRSVLC 7
C+S+LC
Sbjct: 384 CKSLLC 389
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 2 CRSVLC 7
C+S+LC
Sbjct: 384 CKSLLC 389
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 CRSVLCCR 9
C+ ++ CR
Sbjct: 240 CKDIITCR 247
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 CRSVLCCR 9
C+ ++ CR
Sbjct: 240 CKDIITCR 247
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 2 CRSVLC 7
C+S+LC
Sbjct: 384 CKSLLC 389
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 YCRSVLCC 8
YC +CC
Sbjct: 765 YCLVFICC 772
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 CRSVLCC 8
CR++ CC
Sbjct: 777 CRNLACC 783
>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CRSVLCCR 9
CRS C R
Sbjct: 449 CRSASCSR 456
>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)
Query: 2 CRSVLCCR 9
CRS C R
Sbjct: 449 CRSASCSR 456
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 2 CRSVLCCR 9
CRS C R
Sbjct: 449 CRSASCSR 456
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 CRSVLCCR 9
C+ ++ CR
Sbjct: 240 CKDLITCR 247
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 CRSVLCCR 9
C+ ++ CR
Sbjct: 240 CKDLITCR 247
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 CRSVLCC 8
C SVL C
Sbjct: 505 CGSVLLC 511
>sp|PG176_VACCC|PROTEIN OPG176|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YCRSVLCCRS 10
+ + ++CC S
Sbjct: 149 FVKDMICCDS 158
206|Sequence|1026|1035|LCCRSTPLQK
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 LCCRSTPLQK 10
L C +TPL K
Sbjct: 1886 LICSNTPLSK 1895
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 LCCRSTPLQK 10
L C +TPL K
Sbjct: 1856 LICSNTPLSK 1865
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 LCCRSTPLQK 10
L C +TPL K
Sbjct: 1836 LICSNTPLSK 1845
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LCCRSTPLQK 10
L C +TPL K
Sbjct: 1886 LICSNTPLSK 1895
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LCCRSTPLQK 10
L C +TPL K
Sbjct: 1856 LICSNTPLSK 1865
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LCCRSTPLQK 10
L C +TPL K
Sbjct: 1836 LICSNTPLSK 1845
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 2 CCRSTPL 8
CC +PL
Sbjct: 69 CCEHSPL 75
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 2 CCRSTPL 8
CC +PL
Sbjct: 69 CCEHSPL 75
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 CRSTPLQK 10
C STPL K
Sbjct: 1635 CSSTPLPK 1642
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 CRSTPLQK 10
C STPL K
Sbjct: 1635 CSSTPLPK 1642
>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 CRSTPLQK 10
CR TPL +
Sbjct: 531 CRITPLSR 538
>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 CRSTPLQK 10
CR TPL +
Sbjct: 531 CRLTPLSR 538
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 CRSTPLQK 10
CR++ LQK
Sbjct: 1306 CRTSCLQK 1313
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 CRSTPLQK 10
CR++ LQK
Sbjct: 1306 CRTSCLQK 1313
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 CRSTPLQK 10
CR++ LQK
Sbjct: 1306 CRTSCLQK 1313
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 CRSTPLQK 10
CR++ LQK
Sbjct: 1306 CRTSCLQK 1313
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 CRSTPLQK 10
CR++ LQK
Sbjct: 1306 CRTSCLQK 1313
>sp|EBNA1_EBVA8|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 CRSTPLQK 10
CR TPL +
Sbjct: 531 CRLTPLSR 538
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 5 STPLQK 10
STPLQ+
Sbjct: 246 STPLQR 251
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 5 STPLQK 10
STPLQ+
Sbjct: 248 STPLQR 253
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 LCCRSTPLQK 10
L CR+T L K
Sbjct: 549 LYCRTTALSK 558
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 1 LCCRSTPLQK 10
L CR+T L K
Sbjct: 549 LYCRTTALSK 558
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 1 LCCRSTPLQK 10
L CR+T L K
Sbjct: 549 LYCRTTALSK 558
>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38
Query: 5 STPLQK 10
STPLQ+
Sbjct: 249 STPLQR 254
>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25
Query: 5 STPLQK 10
STPLQ+
Sbjct: 247 STPLQR 252
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LCCRSTPLQK 10
LCC +QK
Sbjct: 466 LCCNYKLIQK 475
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LCCRSTPLQK 10
LCC +QK
Sbjct: 466 LCCNYKLIQK 475
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 1 LCCRSTPLQK 10
LCC +QK
Sbjct: 466 LCCNYKLIQK 475
>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14
Query: 5 STPLQK 10
STPLQ+
Sbjct: 248 STPLQR 253
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 2 CCRSTP 7
CRSTP
Sbjct: 172 ACRSTP 177
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CCRSTPLQK 10
C S PL+K
Sbjct: 120 CMLSAPLEK 128
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CCRSTPLQK 10
C S PL+K
Sbjct: 120 CMLSAPLEK 128
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CCRSTPLQK 10
C S PL+K
Sbjct: 120 CMLSAPLEK 128
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 2 CCRSTPLQK 10
C R TPL +
Sbjct: 431 CSRITPLPR 439
207|Sequence|1031|1040|TPLQKSMIVK
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PLQKSMI 8
PLQ+SM+
Sbjct: 1361 PLQQSML 1367
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PLQKSMI 8
PLQ+SM+
Sbjct: 1361 PLQQSML 1367
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 TPLQKSMIV 9
TP K+M+V
Sbjct: 830 TPAYKTMLV 838
208|Sequence|1036|1045|SMIVKLVRDK
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 MIVKLVRDK 10
M+ KLV+DK
Sbjct: 1858 MLEKLVQDK 1866
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 IVKLVRDK 10
I KLVRD+
Sbjct: 1041 IQKLVRDQ 1048
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 VKLVRDK 10
VKLV DK
Sbjct: 159 VKLVEDK 165
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 VKLVRDK 10
VKLV DK
Sbjct: 159 VKLVEDK 165
209|Sequence|1041|1050|LVRDKLRVMT
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVRDKLRVM 9
L R+K+R+M
Sbjct: 265 LSREKIRIM 273
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 RDKLRVM 9
RDK+RV+
Sbjct: 1074 RDKVRVL 1080
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 3 RDKLRVMT 10
RD LRV T
Sbjct: 414 RDSLRVYT 421
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 3 RDKLRVMT 10
RD LRV T
Sbjct: 414 RDSLRVYT 421
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 3 RDKLRVMT 10
RD LRV T
Sbjct: 80 RDSLRVYT 87
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LVRDKLRV 8
L+RDKL +
Sbjct: 6989 LIRDKLSL 6996
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LVRDKLRV 8
L+RDKL +
Sbjct: 7009 LIRDKLSL 7016
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LVRDKLRV 8
L+RDKL +
Sbjct: 7039 LIRDKLSL 7046
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LVRDKLRVM 9
L RD+ RVM
Sbjct: 295 LHRDRARVM 303
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LVRDKLRVM 9
L RD+ RVM
Sbjct: 295 LHRDRARVM 303
210|Sequence|1046|1055|LRVMTLSIGD
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 5 TLSIGD 10
TLS+GD
Sbjct: 141 TLSVGD 146
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 5 TLSIGD 10
TLS+GD
Sbjct: 141 TLSVGD 146
>sp|YVBI_VACCC|UNCHARACTERIZED 7.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RVMTLSIG 9
RV+TLS G
Sbjct: 45 RVLTLSWG 52
211|Sequence|1051|1060|LSIGDGANDV
>sp|VE2_HPV38|REGULATORY protein E2|Human papillomavirus 38
Query: 3 IGDGAND 9
IGD +ND
Sbjct: 395 IGDASND 401
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 5 DGAND 9
DGAND
Sbjct: 358 DGAND 362
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 4 GDGANDV 10
GDG N+V
Sbjct: 401 GDGENNV 407
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 4 GDGANDV 10
GDG N+V
Sbjct: 401 GDGENNV 407
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 5 DGANDV 10
DG NDV
Sbjct: 651 DGLNDV 656
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 5 DGANDV 10
DG NDV
Sbjct: 651 DGLNDV 656
212|Sequence|1056|1065|GANDVSMIQA
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 1 GANDVSMIQA 10
GANDVS +++
Sbjct: 515 GANDVSELES 524
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 1 GANDVSMIQA 10
GANDVS +++
Sbjct: 515 GANDVSELES 524
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 GANDVSMIQA 10
GANDVS +++
Sbjct: 515 GANDVSELES 524
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 GANDVSMIQA 10
GANDVS +++
Sbjct: 515 GANDVSELES 524
>sp|NS1_HRSVA|NON-STRUCTURAL protein 1|Human respiratory syncytial virus A
Query: 1 GANDVSMIQ 9
G+N +SMI+
Sbjct: 2 GSNSLSMIK 10
>sp|NS1_HRSS2|NON-STRUCTURAL protein 1|Human respiratory syncytial virus A
Query: 1 GANDVSMIQ 9
G+N +SMI+
Sbjct: 2 GSNSLSMIK 10
>sp|NS1_HRSV|NON-STRUCTURAL protein 1|Human respiratory syncytial virus
Query: 1 GANDVSMIQ 9
G+N +SMI+
Sbjct: 2 GSNSLSMIK 10
213|Sequence|1061|1070|SMIQAADIGI
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 1 SMIQAADIGI 10
SM+ AAD G+
Sbjct: 71 SMLLAADEGL 80
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 MIQAADIG 9
++QA D+G
Sbjct: 154 IVQAMDVG 161
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 IQAADIG 9
+QAA+IG
Sbjct: 612 LQAAEIG 618
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 IQAADIG 9
+QAA+IG
Sbjct: 612 LQAAEIG 618
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 IQAADIG 9
+QAA+IG
Sbjct: 612 LQAAEIG 618
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 IQAADIGI 10
I AAD+G+
Sbjct: 2670 IVAADLGV 2677
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 IQAADIGI 10
I AAD+G+
Sbjct: 2708 IVAADLGV 2715
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 IQAADIGI 10
I AAD+G+
Sbjct: 2728 IVAADLGV 2735
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 IQAADIGI 10
I AAD+G+
Sbjct: 2758 IVAADLGV 2765
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 IQAADIGI 10
I AAD+G+
Sbjct: 2670 IVAADLGV 2677
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 IQAADIGI 10
I AAD+G+
Sbjct: 2708 IVAADLGV 2715
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 IQAADIGI 10
I AAD+G+
Sbjct: 2728 IVAADLGV 2735
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 IQAADIGI 10
I AAD+G+
Sbjct: 2758 IVAADLGV 2765
214|Sequence|1066|1075|ADIGIGISGQ
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ADIGIGI 7
ADIGIG+
Sbjct: 386 ADIGIGV 392
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 3 IGIGISGQ 10
+G+GISG
Sbjct: 143 LGVGISGH 150
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 3 IGIGISGQ 10
+G+GISG
Sbjct: 129 LGVGISGH 136
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 3 IGIGISGQ 10
+G+GISG
Sbjct: 110 LGVGISGH 117
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 3 IGIGISGQ 10
+G+GISG
Sbjct: 142 LGVGISGH 149
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 3 IGIGISGQ 10
+G+GISG
Sbjct: 110 LGVGISGH 117
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 3 IGIGISGQ 10
+G+GISG
Sbjct: 139 LGVGISGH 146
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 3 IGIGISGQ 10
+G+GISG
Sbjct: 112 LGVGISGH 119
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 3 IGIGISGQ 10
+G+GISG
Sbjct: 113 LGVGISGH 120
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 3 IGIGISGQ 10
+G+GISG
Sbjct: 113 LGVGISGH 120
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 3 IGIGISGQ 10
+G+GISG
Sbjct: 114 LGVGISGH 121
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 3 IGIGISGQ 10
+G+GISG
Sbjct: 114 LGVGISGH 121
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 3 IGIGISGQ 10
+G+GISG
Sbjct: 113 LGVGISGH 120
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 3 IGIGISGQ 10
+G+GISG
Sbjct: 110 LGVGISGH 117
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 3 IGIGISGQ 10
+G+GISG
Sbjct: 111 LGVGISGH 118
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 3 IGIGISG 9
+G+GISG
Sbjct: 113 LGVGISG 119
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 3 IGIGISGQ 10
+GIG+SG
Sbjct: 140 LGIGLSGH 147
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 3 IGIGISGQ 10
+GIG+SG
Sbjct: 112 LGIGLSGH 119
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 3 IGIGISGQ 10
+GIGI+G
Sbjct: 117 LGIGITGH 124
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 113 LGVGVSGH 120
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 110 LGVGVSGH 117
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 110 LGVGVSGH 117
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 140 LGVGVSGH 147
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 111 LGVGVSGH 118
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 111 LGVGVSGH 118
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 128 LGVGVSGH 135
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 222 LGVGVSGH 229
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 110 LGVGVSGH 117
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 1 ADIGIGISGQ 10
A +GI ISG+
Sbjct: 138 APLGITISGE 147
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 3 IGIGISG 9
+G+G+SG
Sbjct: 120 LGVGVSG 126
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 ADIGIGI 7
+DIG+G+
Sbjct: 132 SDIGVGV 138
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 113 LGVGLSGH 120
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 112 LGVGLSGH 119
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 111 LGVGLSGH 118
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 113 LGVGLSGH 120
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 112 LGVGLSGH 119
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 112 LGVGLSGH 119
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 113 LGVGLSGH 120
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 113 LGVGLSGH 120
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 174 LGVGLSGH 181
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 141 LGVGLSGH 148
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 141 LGVGLSGH 148
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 DIGIGISGQ 10
D +GISGQ
Sbjct: 831 DPEMGISGQ 839
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 DIGIGISGQ 10
D +GISGQ
Sbjct: 831 DPEMGISGQ 839
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 DIGIGISGQ 10
D +GISGQ
Sbjct: 831 DPEMGISGQ 839
>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus
Query: 3 IGIGISGQ 10
IG G+SG
Sbjct: 135 IGYGVSGH 142
>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate
Query: 3 IGIGISGQ 10
IG G+SG
Sbjct: 135 IGYGVSGH 142
>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /
Query: 3 IGIGISGQ 10
IG G+SG
Sbjct: 137 IGYGVSGH 144
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 4 GIGISG 9
GIGI+G
Sbjct: 655 GIGITG 660
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 5 IGISGQ 10
+GISGQ
Sbjct: 266 LGISGQ 271
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 IGISGQ 10
+GISGQ
Sbjct: 266 LGISGQ 271
>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)
Query: 3 IGIGISG 9
IG G+SG
Sbjct: 135 IGYGVSG 141
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 3 IGIGISGQ 10
+G+G+SG
Sbjct: 110 LGLGLSGH 117
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 ADIGIGI 7
ADIG G+
Sbjct: 767 ADIGYGV 773
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 ADIGIGI 7
ADIG G+
Sbjct: 767 ADIGYGV 773
215|Sequence|1071|1080|GISGQEGMQA
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 ISGQEGMQ 9
I+G GMQ
Sbjct: 362 IAGSNGMQ 369
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 1 GISGQEGMQ 9
GI+GQ G +
Sbjct: 82 GINGQRGTK 90
216|Sequence|1076|1085|EGMQAVMSSD
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 GMQAVMSSD 10
G+ A +SSD
Sbjct: 47 GINATLSSD 55
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain
Query: 2 GMQAVMSSD 10
G+ A +SSD
Sbjct: 47 GINATLSSD 55
217|Sequence|1081|1090|VMSSDFAITR
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 1 VMSSDFAITR 10
V+S+D +TR
Sbjct: 37 VLSTDVYVTR 46
218|Sequence|1086|1095|FAITRFKHLK
>sp|UL78_HCMVM|PROTEIN UL78|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FAITRFKHL 9
FAI FKH+
Sbjct: 17 FAIVSFKHM 25
>sp|UL78_HCMVA|UNCHARACTERIZED protein UL78|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FAITRFKHL 9
FAI FKH+
Sbjct: 17 FAIVSFKHM 25
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 FAITRFKHLK 10
FAI+RF+ +K
Sbjct: 337 FAISRFEVIK 346
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 FAITRFKHLK 10
FAI+RF+ +K
Sbjct: 337 FAISRFEVIK 346
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 FAITRFKHLK 10
FAI+RF+ +K
Sbjct: 336 FAISRFEVIK 345
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 FAITRFKHLK 10
FAI+RF+ +K
Sbjct: 337 FAISRFEVIK 346
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas)
Query: 1 FAITRFKH 8
F +TRF H
Sbjct: 4 FGLTRFIH 11
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 FAITRFKHLK 10
F+I+RF+ +K
Sbjct: 337 FSISRFEVIK 346
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 AITRFKHLK 10
+++ FKH++
Sbjct: 2478 SVSNFKHIR 2486
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 ITRFKHLK 10
++ FKH++
Sbjct: 2456 VSNFKHIR 2463
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 4 TRFKHLK 10
TR++H K
Sbjct: 203 TRYRHYK 209
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 4 TRFKHLK 10
TR++H K
Sbjct: 203 TRYRHYK 209
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 4 TRFKHLK 10
TR++H K
Sbjct: 203 TRYRHYK 209
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 TRFKHLK 10
TR++H K
Sbjct: 203 TRYRHYK 209
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 TRFKHLK 10
TR++H K
Sbjct: 195 TRYRHYK 201
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 4 TRFKHLK 10
TR++H K
Sbjct: 203 TRYRHYK 209
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 4 TRFKHLK 10
TR++H K
Sbjct: 203 TRYRHYK 209
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 4 TRFKHLK 10
TR++H K
Sbjct: 203 TRYRHYK 209
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 4 TRFKHLK 10
TR++H K
Sbjct: 203 TRYRHYK 209
219|Sequence|1091|1100|FKHLKKLLLV
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 FKHLKKLLLV 10
++HL+ LLL+
Sbjct: 755 YRHLRDLLLI 764
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 1 FKHLKKLLLV 10
++H +KLLL+
Sbjct: 5 YQHFRKLLLL 14
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 FKHLKKLLLV 10
++H +K+LL+
Sbjct: 5 YQHFRKMLLL 14
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 1 FKHLKKLLLV 10
++H ++LLL+
Sbjct: 5 YQHFRRLLLL 14
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 1 FKHLKKLLLV 10
++H ++LLL+
Sbjct: 5 YQHFRRLLLL 14
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 1 FKHLKKLLLV 10
++H ++LLL+
Sbjct: 5 YQHFRRLLLL 14
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 1 FKHLKKLLLV 10
++H ++LLL+
Sbjct: 5 YQHFRRLLLL 14
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 1 FKHLKKLLLV 10
++H ++LLL+
Sbjct: 5 YQHFRRLLLL 14
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 FKHLKKLLLV 10
++H ++LLL+
Sbjct: 5 YQHFRRLLLL 14
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 FKHLKKLLLV 10
++H ++LLL+
Sbjct: 5 YQHFRRLLLL 14
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 FKHLKKLLLV 10
++H ++LLL+
Sbjct: 5 YQHFRRLLLL 14
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 FKHLKKLLLV 10
++H ++LLL+
Sbjct: 5 YQHFRRLLLL 14
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 FKHLKKLLLV 10
++H ++LLL+
Sbjct: 5 YQHFRRLLLL 14
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 FKHLKKLLLV 10
++H KLLL+
Sbjct: 5 YQHFLKLLLL 14
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 1 FKHLKKLL 8
F+H+KK L
Sbjct: 872 FEHMKKNL 879
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 1 FKHLKKLL 8
F+H+KK L
Sbjct: 872 FEHMKKNL 879
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 1 FKHLKKLL 8
F+H+KK L
Sbjct: 871 FEHMKKNL 878
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 1 FKHLKKLL 8
F+H+KK L
Sbjct: 871 FEHMKKNL 878
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 KHLKKLL 8
KHL KLL
Sbjct: 863 KHLCKLL 869
220|Sequence|1096|1105|KLLLVHGHWC
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 3 LLVHGHW 9
+L+HG W
Sbjct: 235 ILIHGSW 241
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 KLLLVHGHW 9
K LL+ GH+
Sbjct: 1028 KYLLIQGHY 1036
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 KLLLVHGHW 9
K LL+ GH+
Sbjct: 1029 KYLLIQGHF 1037
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 2 LLLVHGHW 9
LLLV +W
Sbjct: 430 LLLVRAYW 437
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 2 LLLVHGHW 9
LLLV +W
Sbjct: 428 LLLVRAYW 435
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 2 LLLVHG 7
+LLVHG
Sbjct: 86 MLLVHG 91
Query: 4 LVHGHWC 10
+V+GH C
Sbjct: 348 IVNGHTC 354
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 3 LLVHGH 8
LLVH H
Sbjct: 307 LLVHSH 312
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 LLLVHGHW 9
LLLV G W
Sbjct: 1468 LLLVLGGW 1475
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 LLLVHGH 8
+LLV GH
Sbjct: 1171 MLLVSGH 1177
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 4 LVHGHW 9
L HG W
Sbjct: 91 LAHGTW 96
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 4 LVHGHW 9
L+HG W
Sbjct: 2123 LLHGLW 2128
221|Sequence|1101|1110|HGHWCYSRLA
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 3 HWCYS 7
HWCY+
Sbjct: 173 HWCYT 177
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 3 HWCYS 7
HWCY+
Sbjct: 173 HWCYT 177
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 3 HWCYS 7
HWCY+
Sbjct: 173 HWCYT 177
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 3 HWCYS 7
HWCY+
Sbjct: 173 HWCYT 177
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 3 HWCYS 7
HWCY+
Sbjct: 190 HWCYT 194
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 3 HWCYS 7
HWCY+
Sbjct: 190 HWCYT 194
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 3 HWCYS 7
HWCY+
Sbjct: 190 HWCYT 194
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 3 HWCYS 7
HWCY+
Sbjct: 190 HWCYT 194
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 3 HWCYS 7
HWCY+
Sbjct: 190 HWCYT 194
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 3 HWCYS 7
HWCY+
Sbjct: 178 HWCYT 182
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 3 HWCYS 7
HWCY+
Sbjct: 178 HWCYT 182
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 3 HWCYS 7
HWCY+
Sbjct: 185 HWCYT 189
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 WCYSRL 9
WCYS++
Sbjct: 555 WCYSKV 560
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 HGHWCY 6
HG W Y
Sbjct: 922 HGQWTY 927
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 HGHWCY 6
HG W Y
Sbjct: 921 HGQWTY 926
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 HGHWCY 6
HG W Y
Sbjct: 916 HGQWTY 921
>sp|GN_HHV7J|ENVELOPE glycoprotein N|Human herpesvirus 7 (strain JI)
Query: 3 HWCYSRLA 10
+WC+ LA
Sbjct: 72 YWCFKTLA 79
>sp|VME1_CVHNL|MEMBRANE protein|Human coronavirus NL63 (HCoV-NL63)
Query: 1 HGHWCYSRL 9
+GH+ YSRL
Sbjct: 35 YGHYKYSRL 43
>sp|POXIN_VACCC|POXIN virus (strain Copenhagen) (VACV)
Query: 4 WCYSRL 9
WCYS++
Sbjct: 52 WCYSQV 57
>sp|POXIN_VACCA|POXIN virus (strain Ankara) (VACV)
Query: 4 WCYSRL 9
WCYS++
Sbjct: 52 WCYSQV 57
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 GHWCY 6
G WCY
Sbjct: 2592 GGWCY 2596
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 GHWCY 6
G WCY
Sbjct: 2592 GGWCY 2596
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 GHWCY 6
G WCY
Sbjct: 2592 GGWCY 2596
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 1 HGHWCYSRL 9
H H CY+ L
Sbjct: 78 HAHICYANL 86
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 1 HGHWCYSRL 9
H H CY+ L
Sbjct: 78 HAHICYANL 86
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 1 HGHWCYSRL 9
H H CY+ L
Sbjct: 78 HAHICYANL 86
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 GHWCY 6
G WCY
Sbjct: 2591 GGWCY 2595
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 GHWCY 6
G WCY
Sbjct: 2613 GGWCY 2617
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 GHWCY 6
G WCY
Sbjct: 2610 GGWCY 2614
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HGHWCYS 7
GHW YS
Sbjct: 319 RGHWTYS 325
>sp|VME1_CVH22|MEMBRANE protein|Human coronavirus 229E (HCoV-229E)
Query: 2 GHWCYSRL 9
GH+ YSRL
Sbjct: 35 GHYKYSRL 42
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 GHWCY 6
G WCY
Sbjct: 2591 GGWCY 2595
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 GHWCY 6
G WCY
Sbjct: 2613 GGWCY 2617
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 GHWCY 6
G WCY
Sbjct: 2591 GGWCY 2595
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 GHWCY 6
G WCY
Sbjct: 2591 GGWCY 2595
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 GHWCY 6
G WCY
Sbjct: 2591 GGWCY 2595
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 GHWCY 6
G WCY
Sbjct: 2591 GGWCY 2595
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 GHWCY 6
G WCY
Sbjct: 2592 GGWCY 2596
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 2 GHWCYS 7
GHW YS
Sbjct: 355 GHWTYS 360
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GHWCYS 7
GHW YS
Sbjct: 352 GHWTYS 357
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 1 HGHWCYSRL 9
+GH CY+ L
Sbjct: 150 YGHVCYAGL 158
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 GHWCYS 7
GH CY+
Sbjct: 425 GHGCYT 430
>sp|DUT_VARV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus
Query: 4 WCYSRLA 10
+CY R+A
Sbjct: 61 FCYGRIA 67
>sp|DUT_VAR67|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus (isolate
Query: 4 WCYSRLA 10
+CY R+A
Sbjct: 61 FCYGRIA 67
>sp|DUT_MONPV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Monkeypox virus (MPXV)
Query: 4 WCYSRLA 10
+CY R+A
Sbjct: 65 FCYGRIA 71
>sp|DUT_CWPXG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Cowpox virus (strain GRI-90 /
Query: 4 WCYSRLA 10
+CY R+A
Sbjct: 61 FCYGRIA 67
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 3 HWCYS 7
HWC S
Sbjct: 859 HWCTS 863
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 3 HWCYS 7
HWC S
Sbjct: 859 HWCTS 863
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 GHWCYSRLA 10
GH C+S +A
Sbjct: 350 GHSCHSPIA 358
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 3 HWCYS 7
HWC S
Sbjct: 860 HWCTS 864
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 3 HWCYS 7
HWC S
Sbjct: 861 HWCTS 865
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 3 HWCYS 7
HWC S
Sbjct: 861 HWCTS 865
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 3 HWCYS 7
HWC S
Sbjct: 859 HWCTS 863
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 GHWCYSRLA 10
GH C+S +A
Sbjct: 349 GHSCHSPIA 357
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 GHWCYSRLA 10
GH C+S +A
Sbjct: 349 GHSCHSPIA 357
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 GHWCYSRLA 10
GH C+S +A
Sbjct: 349 GHSCHSPIA 357
>sp|UL141_HCMVM|PROTEIN UL141|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GHWC 5
GHWC
Sbjct: 305 GHWC 308
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 HWCYSRL 9
+W Y+R+
Sbjct: 1111 YWLYTRI 1117
>sp|DUT_YMTV5|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Yaba monkey tumor virus
Query: 5 CYSRLA 10
CY R+A
Sbjct: 58 CYGRIA 63
>sp|DUT_VACCP|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain L-IVP)
Query: 5 CYSRLA 10
CY R+A
Sbjct: 62 CYGRIA 67
>sp|DUT_VACCC|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 5 CYSRLA 10
CY R+A
Sbjct: 62 CYGRIA 67
>sp|DUT_VACCA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 5 CYSRLA 10
CY R+A
Sbjct: 62 CYGRIA 67
>sp|GN_HHV6U|ENVELOPE glycoprotein N|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 HWCYSRLA 10
+WCY A
Sbjct: 70 YWCYKTFA 77
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 2 GHWCYS 7
GH+C S
Sbjct: 878 GHYCVS 883
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 GHWCYSRLA 10
GH C+S +A
Sbjct: 350 GHSCHSPVA 358
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 GHWCYSRLA 10
GH C+S +A
Sbjct: 350 GHSCHSPVA 358
>sp|GN_HHV6Z|ENVELOPE glycoprotein N|Human herpesvirus 6B (strain Z29)
Query: 3 HWCYSRLA 10
+WCY A
Sbjct: 70 YWCYKTFA 77
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 2 GHWCYS 7
GH+C S
Sbjct: 886 GHYCLS 891
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 2 GHWCYS 7
GH+C S
Sbjct: 886 GHYCLS 891
>sp|DUT_HHV6Z|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6B (strain
Query: 2 GHWCYS 7
GH+C S
Sbjct: 342 GHFCLS 347
>sp|DUT_HHV6U|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 2 GHWCYS 7
GH+C S
Sbjct: 342 GHFCLS 347
>sp|DUT_HHV6G|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 2 GHWCYS 7
GH+C S
Sbjct: 342 GHFCLS 347
>sp|M1_INBLE|MATRIX protein 1|Influenza B virus (strain B/Lee/1940)
Query: 1 HGHWCYSRLA 10
H H +SR A
Sbjct: 157 HSHRAHSRAA 166
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 GHWCYSRLA 10
GH C+S +A
Sbjct: 358 GHSCHSPVA 366
>sp|M1_INBYA|MATRIX protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 1 HGHWCYSRLA 10
H H +SR A
Sbjct: 157 HSHRAHSRAA 166
>sp|M1_INBMP|MATRIX protein 1|Influenza B virus (strain B/Memphis/12/1997)
Query: 1 HGHWCYSRLA 10
H H +SR A
Sbjct: 157 HSHRAHSRAA 166
>sp|M1_INBAD|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 1 HGHWCYSRLA 10
H H +SR A
Sbjct: 157 HSHRAHSRAA 166
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 GHWCYSRLA 10
GH C+S +A
Sbjct: 350 GHSCHSPVA 358
>sp|DUT_ORFN2|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Orf virus (strain NZ2) (OV
Query: 5 CYSRLA 10
CY R+A
Sbjct: 61 CYGRIA 66
>sp|M1_INBSI|MATRIX protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 HGHWCYSRLA 10
H H +SR A
Sbjct: 157 HSHRAHSRAA 166
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 2 GHWCYSRLA 10
GH C+S +A
Sbjct: 358 GHSCHSPVA 366
222|Sequence|1106|1115|YSRLARMVVY
>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 162 YDRLASTVIY 171
>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 162 YDRLASTVIY 171
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 162 YDRLASTVIY 171
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 163 YDRLASTVIY 172
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 163 YDRLASTVIY 172
>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 162 YDRLASTVIY 171
>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 162 YDRLASTVIY 171
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 162 YDRLASTVIY 171
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 162 YDRLASTVIY 171
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 162 YDRLASTVIY 171
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 163 YDRLASTVIY 172
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 163 YDRLASTVIY 172
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 163 YDRLASTVIY 172
>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 162 YDRLASTVIY 171
>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 162 YDRLASTVIY 171
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 162 YDRLASTVIY 171
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 162 YDRLASTVIY 171
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 162 YDRLASTVIY 171
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 162 YDRLASTVIY 171
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 162 YDRLASTVIY 171
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 163 YDRLASTVIY 172
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 163 YDRLASTVIY 172
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 163 YDRLASTVIY 172
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 162 YDRLASTVIY 171
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 1 YSRLARMVVY 10
Y RLA V+Y
Sbjct: 162 YDRLASTVIY 171
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 YSRLARMVVY 10
Y RLA ++Y
Sbjct: 162 YDRLASTIIY 171
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 YSRLARMVVY 10
Y RLA ++Y
Sbjct: 162 YDRLASTIIY 171
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 SRLARMVVY 10
S LAR+V+Y
Sbjct: 392 SDLARIVLY 400
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 RLARMVVY 10
R+AR +VY
Sbjct: 682 RIARSLVY 689
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 1 YSRLARMVVY 10
++ LAR VV+
Sbjct: 257 FTELARAVVF 266
223|Sequence|1111|1120|RMVVYYLYKN
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 2 MVVYYLYK 9
++V+YLYK
Sbjct: 341 LLVFYLYK 348
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 3 VVYYLY 8
VVYY+Y
Sbjct: 538 VVYYVY 543
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 3 VVYYLY 8
VVYY+Y
Sbjct: 538 VVYYVY 543
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 VVYYLY 8
VVYY+Y
Sbjct: 538 VVYYVY 543
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 3 VVYYLY 8
VVYY+Y
Sbjct: 538 VVYYVY 543
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 3 VVYYLY 8
VVYY+Y
Sbjct: 538 VVYYVY 543
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 VVYYLY 8
VVYY+Y
Sbjct: 538 VVYYVY 543
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 3 VVYYLYK 9
V+Y+LY+
Sbjct: 718 VIYFLYR 724
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 RMVVYYLYKN 10
+ VY YKN
Sbjct: 859 KFTVYLRYKN 868
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 RMVVYYLYKN 10
+ VY YKN
Sbjct: 859 KFTVYLRYKN 868
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 RMVVYYLYKN 10
+ VY YKN
Sbjct: 859 KFTVYLRYKN 868
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 RMVVYYLYKN 10
+ VY YKN
Sbjct: 859 KFTVYLRYKN 868
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 RMVVYYLYKN 10
+ VY YKN
Sbjct: 859 KFTVYLRYKN 868
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 RMVVYYLYKN 10
+ VY YKN
Sbjct: 857 KFTVYLRYKN 866
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 VVYYLYK 9
VVY +YK
Sbjct: 1528 VVYVMYK 1534
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 VVYYLYK 9
VVY +YK
Sbjct: 1531 VVYVMYK 1537
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 VVYYLYK 9
VVY +YK
Sbjct: 1529 VVYVMYK 1535
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 VVYYLYK 9
VVY +YK
Sbjct: 1531 VVYVMYK 1537
>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain
Query: 5 YYLYK 9
YYLY+
Sbjct: 516 YYLYR 520
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 VVYYLYK 9
VVY +YK
Sbjct: 1528 VVYVMYK 1534
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 VVYYLYK 9
VVY +YK
Sbjct: 1529 VVYVMYK 1535
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 VVYYLYK 9
VVY +YK
Sbjct: 1528 VVYVMYK 1534
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 VVYYLYK 9
VVY +YK
Sbjct: 1520 VVYVIYK 1526
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 1 RMVVYYLY 8
R V+YY Y
Sbjct: 59 RGVIYYSY 66
224|Sequence|1116|1125|YLYKNVCYVN
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 YLYKNVCYV 9
+ YK+ CYV
Sbjct: 626 FRYKSKCYV 634
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 YLYKNVCYV 9
+ YK+ CYV
Sbjct: 625 FRYKSRCYV 633
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 YLYKNVCYV 9
+ YK+ CYV
Sbjct: 627 FRYKSRCYV 635
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 YLYKNVCYV 9
+ YK+ CYV
Sbjct: 625 FRYKSRCYV 633
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 YLYKNVCYV 9
+ YK+ CYV
Sbjct: 624 FRYKSRCYV 632
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 2 LYKNVC-YVN 10
LY NVC Y N
Sbjct: 555 LYPNVCIYAN 564
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 LYKNVC 7
LYKN+C
Sbjct: 5402 LYKNMC 5407
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 2 LYKNVC 7
+Y+NVC
Sbjct: 630 VYENVC 635
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 2 LYKNVC 7
+Y+NVC
Sbjct: 632 VYENVC 637
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 4 KNVCYVN 10
K VC+VN
Sbjct: 147 KKVCFVN 153
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 KNVCYVN 10
K VC+VN
Sbjct: 147 KKVCFVN 153
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 KNVCYVN 10
K VC+VN
Sbjct: 147 KKVCFVN 153
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 4 KNVCYVN 10
+N CY++
Sbjct: 191 RNACYIS 197
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 4 KNVCYVN 10
K VC+VN
Sbjct: 147 KKVCFVN 153
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 4 KNVCYVN 10
K VC+VN
Sbjct: 147 KKVCFVN 153
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LYKNVC 7
LYKN C
Sbjct: 5416 LYKNTC 5421
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LYKNVC 7
LYKN C
Sbjct: 5393 LYKNTC 5398
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 KNVCYVN 10
KN CY+N
Sbjct: 188 KNRCYMN 194
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 YLYKNVCYV 9
+ YK+ CY+
Sbjct: 619 FRYKSRCYI 627
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 YLYKNVCYV 9
+ YK+ CY+
Sbjct: 619 FRYKSRCYI 627
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 YLYKNVCYV 9
+ YK+ CY+
Sbjct: 619 FRYKSRCYI 627
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 YLYKNVCYV 9
+ YK+ CY+
Sbjct: 621 FRYKSRCYI 629
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 3 YKNVCYVN 10
YKN +VN
Sbjct: 56 YKNSTWVN 63
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 YLYKNVCYV 9
+ YK+ CY+
Sbjct: 621 FRYKSRCYI 629
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 YLYKNVCYV 9
+ YK+ CY+
Sbjct: 619 FRYKSRCYI 627
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 YLYKNVCYV 9
+ YK+ CY+
Sbjct: 621 FRYKSRCYI 629
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 YLYKNVCYV 9
+ YK+ CY+
Sbjct: 621 FRYKSRCYI 629
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 3 YKNVCYVN 10
YKN +VN
Sbjct: 56 YKNSTWVN 63
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 3 YKNVCYVN 10
YKN +VN
Sbjct: 56 YKNSTWVN 63
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 3 YKNVCYVN 10
YKN +VN
Sbjct: 56 YKNSTWVN 63
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 3 YKNVCYVN 10
YKN +VN
Sbjct: 56 YKNSTWVN 63
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 4 KNVCYVN 10
K++CYV+
Sbjct: 127 KSMCYVH 133
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 4 KNVCYVN 10
+N CY++
Sbjct: 194 RNCCYIS 200
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 3 YKNVCYVN 10
YKN +VN
Sbjct: 56 YKNSTWVN 63
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 YKNVCYVN 10
YK++C+++
Sbjct: 502 YKDLCHMH 509
225|Sequence|1121|1130|VCYVNLLFWY
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 CYVNLLFWY 10
CYVNL +Y
Sbjct: 962 CYVNLPTYY 970
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 YVNLLFW 9
YVN++ W
Sbjct: 85 YVNVILW 91
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 YVNLLFW 9
YVN++ W
Sbjct: 85 YVNVILW 91
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 CYVNLLFWY 10
CYVNL +Y
Sbjct: 962 CYVNLPTYY 970
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 3 YVNLLFW 9
Y NL FW
Sbjct: 436 YKNLSFW 442
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 3 YVNLLFW 9
Y NL FW
Sbjct: 436 YKNLSFW 442
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 5 NLLFWY 10
NLL WY
Sbjct: 732 NLLRWY 737
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 3 YVNLLFW 9
Y N+ FW
Sbjct: 546 YANMTFW 552
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 3 YVNLLFW 9
Y NL FW
Sbjct: 458 YKNLHFW 464
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 2 CYVNLL 7
CY NLL
Sbjct: 9 CYCNLL 14
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 3 YVNLLFW 9
Y NL FW
Sbjct: 487 YKNLHFW 493
>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VCYVNLLFWY 10
V ++N FWY
Sbjct: 37 VSHINHTFWY 46
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 2 CYVNL 6
CY+NL
Sbjct: 407 CYINL 411
>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1
Query: 2 CYVNL 6
CY+NL
Sbjct: 409 CYINL 413
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 2 CYVNL 6
CY+NL
Sbjct: 532 CYINL 536
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 2 CYVNL 6
CY+NL
Sbjct: 516 CYINL 520
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 2 CYVNLLF 8
C VNLLF
Sbjct: 126 CIVNLLF 132
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1551 VCQEHLEFW 1559
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 3 YVNLLFW 9
Y N+ FW
Sbjct: 459 YKNMKFW 465
>sp|PG070_MONPV|PROTEIN OPG070|Monkeypox virus (MPXV)
Query: 5 NLLFWY 10
N+LFW+
Sbjct: 138 NILFWF 143
>sp|PG070_VARV|PROTEIN OPG070|Variola virus
Query: 5 NLLFWY 10
N+LFW+
Sbjct: 138 NILFWF 143
>sp|PG070_VAR67|PROTEIN OPG070|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 NLLFWY 10
N+LFW+
Sbjct: 138 NILFWF 143
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1554 VCQDHLEFW 1562
>sp|PG070_VACCC|PROTEIN OPG070|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 NLLFWY 10
N+LFW+
Sbjct: 138 NILFWF 143
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1554 VCQDHLEFW 1562
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1554 VCQDHLEFW 1562
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1551 VCQDHLEFW 1559
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1552 VCQDHLEFW 1560
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1554 VCQDHLEFW 1562
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1551 VCQDHLEFW 1559
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1550 VCQDHLEFW 1558
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1550 VCQDHLEFW 1558
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1555 VCQDHLEFW 1563
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1550 VCQDHLEFW 1558
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1550 VCQDHLEFW 1558
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1554 VCQDHLEFW 1562
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1550 VCQDHLEFW 1558
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1550 VCQDHLEFW 1558
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1550 VCQDHLEFW 1558
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1554 VCQDHLEFW 1562
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1548 VCQDHLEFW 1556
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1550 VCQDHLEFW 1558
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1554 VCQDHLEFW 1562
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1550 VCQDHLEFW 1558
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1550 VCQDHLEFW 1558
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1555 VCQDHLEFW 1563
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1555 VCQDHLEFW 1563
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1554 VCQDHLEFW 1562
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1550 VCQDHLEFW 1558
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 VCYVNLLFW 9
VC +L FW
Sbjct: 1550 VCQDHLEFW 1558
226|Sequence|1126|1135|LLFWYQFFCG
>sp|UL79_HHV7J|PROTEIN U52|Human herpesvirus 7 (strain JI)
Query: 3 FWYQFFC 9
FW++ FC
Sbjct: 82 FWFKIFC 88
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 LLFWYQFF 8
+L+W Q+F
Sbjct: 843 MLWWIQYF 850
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LLFWYQFF 8
L++W Q+F
Sbjct: 842 LIWWLQYF 849
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LLFWYQFF 8
L++W Q+F
Sbjct: 842 LIWWLQYF 849
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LLFWYQFF 8
L++W Q+F
Sbjct: 842 LIWWLQYF 849
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LLFWYQFF 8
L++W Q+F
Sbjct: 842 LIWWLQYF 849
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LLFWYQFF 8
L++W Q+F
Sbjct: 842 LIWWLQYF 849
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LLFWYQFF 8
L++W Q+F
Sbjct: 842 LIWWLQYF 849
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LLFWYQFF 8
L++W Q+F
Sbjct: 842 LIWWLQYF 849
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 LLFWYQFFC 9
LL+W FC
Sbjct: 3483 LLYWINRFC 3491
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 LLFWYQFFC 9
LL+W FC
Sbjct: 3483 LLYWINRFC 3491
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 LLFWYQFF 8
L+W Q+F
Sbjct: 846 FLWWTQYF 853
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 LFWYQFF 8
L+W Q+F
Sbjct: 843 LWWIQYF 849
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 LFWYQFF 8
L+W Q+F
Sbjct: 843 LWWLQYF 849
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 LFWYQFF 8
L+W Q+F
Sbjct: 843 LWWLQYF 849
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 LLFWYQFF 8
L+W Q+F
Sbjct: 840 FLWWNQYF 847
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 LLFWYQFF 8
+++W Q+F
Sbjct: 843 VMWWLQYF 850
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 LLFWYQFF 8
+++W Q+F
Sbjct: 843 VIWWLQYF 850
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 LFWYQFF 8
++W Q+F
Sbjct: 843 MWWLQYF 849
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 FWYQFF 8
FW FF
Sbjct: 248 FWENFF 253
>sp|E4OR1_ADE09|E4-ORF1 adenovirus D serotype 9
Query: 5 YQFFC 9
Y FFC
Sbjct: 26 YTFFC 30
>sp|U148C_HCMVM|PROTEIN UL148C|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LLFWYQFFC 9
L+ W + FC
Sbjct: 16 LVVWVEMFC 24
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 3 FWYQFF 8
FW FF
Sbjct: 248 FWENFF 253
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 4 WYQFFC 9
W Q FC
Sbjct: 221 WLQSFC 226
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 LLFWYQ 6
LLFW Q
Sbjct: 387 LLFWEQ 392
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 LLFWYQ 6
LLFW Q
Sbjct: 385 LLFWEQ 390
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 YQFFCG 10
Y+F CG
Sbjct: 324 YKFSCG 329
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 5 YQFFCG 10
Y+F CG
Sbjct: 324 YKFSCG 329
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 YQFFCG 10
Y+F CG
Sbjct: 324 YKFSCG 329
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 5 YQFFCG 10
Y+F CG
Sbjct: 324 YKFSCG 329
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 5 YQFFCG 10
Y+F CG
Sbjct: 324 YKFSCG 329
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 4 WYQFFC 9
W++ FC
Sbjct: 332 WFRDFC 337
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 4 WYQFFC 9
W++ FC
Sbjct: 332 WFRDFC 337
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 4 WYQFFC 9
W++ FC
Sbjct: 332 WFRDFC 337
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 4 WYQFFC 9
W++ FC
Sbjct: 332 WFRDFC 337
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 5 YQFFC 9
YQ FC
Sbjct: 303 YQLFC 307
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 5 YQFFC 9
YQ FC
Sbjct: 303 YQLFC 307
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 LLFWYQ 6
LLFW Q
Sbjct: 380 LLFWEQ 385
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 YQFFC 9
YQ FC
Sbjct: 303 YQLFC 307
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 LLFWYQ 6
LLFW Q
Sbjct: 384 LLFWEQ 389
227|Sequence|1131|1140|QFFCGFSSST
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 1 QFFCGFSSST 10
+FFC FS+ T
Sbjct: 353 RFFCAFSNET 362
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 FCGFSSST 10
FCG +SST
Sbjct: 455 FCGSASST 462
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 2 FFCGFSS 8
FFC FS+
Sbjct: 39 FFCKFSN 45
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FFCGFSS 8
FFC FS+
Sbjct: 39 FFCKFSN 45
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 2 FFCGFSS 8
FFC FS+
Sbjct: 39 FFCKFSN 45
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 FFCGFSSST 10
FCGF +T
Sbjct: 460 LFCGFMMAT 468
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 1 QFFCGFSS 8
QF+C F +
Sbjct: 167 QFYCNFKN 174
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 3 FCGFS 7
FCGF+
Sbjct: 1319 FCGFT 1323
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 3 FCGFS 7
FCGF+
Sbjct: 1318 FCGFT 1322
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 3 FCGFS 7
FCGF+
Sbjct: 1317 FCGFT 1321
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 3 FCGFS 7
FCGF+
Sbjct: 1338 FCGFT 1342
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 1 QFFCGF 6
QF+C F
Sbjct: 167 QFYCNF 172
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 FCGFS 7
FCGF+
Sbjct: 614 FCGFA 618
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 FCGFS 7
FCGF+
Sbjct: 614 FCGFA 618
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 FCGFS 7
FCGF+
Sbjct: 614 FCGFA 618
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 3 FCGFSSST 10
F GF SST
Sbjct: 59 FTGFYSST 66
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 5 GFSSST 10
GFSSST
Sbjct: 1066 GFSSST 1071
228|Sequence|1136|1145|FSSSTMIDYW
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 FSSSTMIDY 9
F +TM++Y
Sbjct: 160 FKGTTMLEY 168
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 1 FSSSTMIDY 9
F +TM++Y
Sbjct: 160 FKGTTMLEY 168
>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)
Query: 5 TMIDYW 10
TM+D W
Sbjct: 79 TMLDTW 84
>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)
Query: 5 TMIDYW 10
TM+D W
Sbjct: 79 TMLDTW 84
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 FSSSTMIDY 9
F +TM++Y
Sbjct: 160 FKGTTMLEY 168
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 FSSSTMIDYW 10
FSS++ D W
Sbjct: 668 FSSNSFSDDW 677
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 5 TMIDYW 10
TM+D W
Sbjct: 77 TMLDTW 82
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 5 TMIDYW 10
TM+D W
Sbjct: 77 TMLDTW 82
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FSSSTMIDYW 10
F+S + YW
Sbjct: 818 FTSKPTLGYW 827
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 1 FSSSTMIDY 9
F STMI Y
Sbjct: 315 FDLSTMIQY 323
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 FSSSTMIDYW 10
F+S + YW
Sbjct: 495 FASKPTLGYW 504
229|Sequence|1141|1150|MIDYWQMIFF
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 2 IDYWQMIFF 10
IDYW+++ +
Sbjct: 30 IDYWKLVRY 38
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 IDYWQMI 8
IDYW +I
Sbjct: 78 IDYWMLI 84
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 2 IDYWQMI 8
IDYW +I
Sbjct: 77 IDYWMLI 83
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 2 IDYWQMIFF 10
IDYW+++ +
Sbjct: 30 IDYWKLVRY 38
>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45
Query: 2 IDYWQMI 8
I YWQ+I
Sbjct: 36 ISYWQLI 42
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 2 IDYWQMI 8
I YWQ+I
Sbjct: 34 IQYWQLI 40
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 IDYWQMI 8
+DYW +I
Sbjct: 78 VDYWMLI 84
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 IDYWQMI 8
+DYW +I
Sbjct: 78 VDYWMLI 84
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 IDYWQMIF 9
+D+W+ +F
Sbjct: 1563 LDFWERVF 1570
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 2 IDYWQMI 8
IDYW+ +
Sbjct: 30 IDYWKAV 36
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 IDYWQMIF 9
+D+W+ +F
Sbjct: 1561 LDFWESVF 1568
>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53
Query: 2 IDYWQMI 8
IDYW+ +
Sbjct: 30 IDYWKAV 36
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 DYWQMIF 9
DYWQ+ +
Sbjct: 1014 DYWQVTW 1020
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 DYWQMIF 9
DYWQ+ +
Sbjct: 1012 DYWQVTW 1018
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 DYWQMIF 9
DYWQ+ +
Sbjct: 1013 DYWQVTW 1019
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 2 IDYWQ 6
IDYW+
Sbjct: 36 IDYWE 40
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 5 WQMIFF 10
WQ+++F
Sbjct: 3284 WQLLYF 3289
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 5 WQMIFF 10
WQ+++F
Sbjct: 3284 WQLLYF 3289
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 5 WQMIFF 10
WQ+++F
Sbjct: 3280 WQLLYF 3285
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 5 WQMIFF 10
WQ+++F
Sbjct: 3271 WQLLYF 3276
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 DYWQ 6
DYWQ
Sbjct: 986 DYWQ 989
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 DYWQ 6
DYWQ
Sbjct: 989 DYWQ 992
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 DYWQ 6
DYWQ
Sbjct: 988 DYWQ 991
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 DYWQ 6
DYWQ
Sbjct: 988 DYWQ 991
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 DYWQ 6
DYWQ
Sbjct: 995 DYWQ 998
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 DYWQ 6
DYWQ
Sbjct: 991 DYWQ 994
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 DYWQ 6
DYWQ
Sbjct: 987 DYWQ 990
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 2 IDYWQMI 8
ID+WQ +
Sbjct: 30 IDHWQTL 36
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 DYWQ 6
DYWQ
Sbjct: 990 DYWQ 993
>sp|VE2_HPV35|REGULATORY protein E2|Human papillomavirus 35
Query: 2 IDYWQMI 8
I YW++I
Sbjct: 31 IQYWKLI 37
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IDYWQ 6
I+YWQ
Sbjct: 987 IEYWQ 991
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 IDYWQMI 8
I+YW +I
Sbjct: 78 INYWMLI 84
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 1 MIDYWQM 7
+ID WQ+
Sbjct: 403 IIDSWQL 409
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 4 YWQMIFF 10
+W IFF
Sbjct: 421 FWSAIFF 427
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IDYWQ 6
++YWQ
Sbjct: 991 VEYWQ 995
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 5 WQMIF 9
WQ++F
Sbjct: 53 WQLVF 57
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 IDYWQM 7
I YWQ+
Sbjct: 1661 IQYWQV 1666
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 2 IDYWQMIFF 10
I +W +FF
Sbjct: 436 ICFWSTVFF 444
>sp|HBZ_HTL1L|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 2 IDYWQ 6
++YWQ
Sbjct: 195 VNYWQ 199
>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 2 IDYWQ 6
++YWQ
Sbjct: 196 VNYWQ 200
>sp|HBZ_HTL1A|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 2 IDYWQ 6
++YWQ
Sbjct: 196 VNYWQ 200
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 2 IDYWQMIFF 10
I +W ++F+
Sbjct: 447 ICFWSLVFY 455
>sp|UL26_HCMVM|TEGUMENT protein UL26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 IDYWQMI 8
++YW+++
Sbjct: 84 VEYWKLL 90
>sp|UL26_HCMVA|TEGUMENT protein UL26|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 IDYWQMI 8
++YW+++
Sbjct: 84 VEYWKLL 90
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 2 IDYWQMIFF 10
I +W +FF
Sbjct: 425 ICFWSTVFF 433
230|Sequence|1146|1155|QMIFFNLFFT
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 QMIFFNLF 8
+M+F NLF
Sbjct: 1881 RMVFGNLF 1888
231|Sequence|1151|1160|NLFFTSLPPL
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 FTSLPPL 10
F+S+PPL
Sbjct: 2396 FSSMPPL 2402
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 FFTSLPPL 10
+FTS PP+
Sbjct: 1831 YFTSEPPV 1838
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 NLFFTSLPP 9
NLF TS+ P
Sbjct: 91 NLFETSIKP 99
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 NLFFTSLPP 9
NLF TS+ P
Sbjct: 92 NLFETSIKP 100
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 NLFFTSLPP 9
NLF TS+ P
Sbjct: 93 NLFETSIKP 101
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 FFTSLPPL 10
+FTS PP+
Sbjct: 1831 YFTSEPPV 1838
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LFFTSLPP 9
LF+ S+PP
Sbjct: 628 LFYHSIPP 635
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1815 IFMTATPP 1822
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1815 IFMTATPP 1822
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1811 IFMTATPP 1818
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1818 IFMTATPP 1825
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1814 IFMTATPP 1821
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1816 IFMTATPP 1823
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1811 IFMTATPP 1818
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1812 IFMTATPP 1819
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1810 IFMTATPP 1817
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1816 IFMTATPP 1823
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1818 IFMTATPP 1825
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1805 IFMTATPP 1812
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1817 IFMTATPP 1824
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1817 IFMTATPP 1824
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1817 IFMTATPP 1824
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1817 IFMTATPP 1824
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1810 IFMTATPP 1817
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1786 IFMTATPP 1793
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1786 IFMTATPP 1793
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1786 IFMTATPP 1793
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1786 IFMTATPP 1793
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1786 IFMTATPP 1793
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1786 IFMTATPP 1793
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1786 IFMTATPP 1793
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1786 IFMTATPP 1793
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1786 IFMTATPP 1793
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1786 IFMTATPP 1793
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1377 IFMTATPP 1384
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1787 IFMTATPP 1794
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1787 IFMTATPP 1794
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1787 IFMTATPP 1794
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1787 IFMTATPP 1794
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1787 IFMTATPP 1794
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1787 IFMTATPP 1794
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1787 IFMTATPP 1794
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1788 IFMTATPP 1795
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1787 IFMTATPP 1794
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1788 IFMTATPP 1795
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 LFFTSLPP 9
+F T+ PP
Sbjct: 1785 IFMTATPP 1792
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 NLFFTSLPP 9
NLF +PP
Sbjct: 106 NLFSPRVPP 114
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 LFFTSL 7
+FFTSL
Sbjct: 567 IFFTSL 572
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 LFFTSL 7
+FFTSL
Sbjct: 567 IFFTSL 572
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 LFFTSL 7
+FFTSL
Sbjct: 567 IFFTSL 572
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 LFFTSL 7
+FFTSL
Sbjct: 567 IFFTSL 572
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 LFFTSL 7
+FFTSL
Sbjct: 567 IFFTSL 572
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 LFFTSL 7
+FFTSL
Sbjct: 567 IFFTSL 572
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 1 NLFFTSLPP 9
NLF +PP
Sbjct: 104 NLFSPRVPP 112
232|Sequence|1156|1165|SLPPLVFGVL
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 SLPPLVFG 8
+LPPLV G
Sbjct: 507 ALPPLVSG 514
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 SLPPLVFG 8
+LPPLV G
Sbjct: 507 ALPPLVSG 514
>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)
Query: 1 SLPPLVF 7
S+PP++F
Sbjct: 2 SIPPVIF 8
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 SLPPLVFG 8
S PP+ FG
Sbjct: 1795 SHPPISFG 1802
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 SLPPLV 6
+LPPLV
Sbjct: 506 ALPPLV 511
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 SLPPLV 6
+LPPLV
Sbjct: 511 ALPPLV 516
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 SLPPLV 6
+LPPLV
Sbjct: 509 ALPPLV 514
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 SLPPLV 6
+LPPLV
Sbjct: 511 ALPPLV 516
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 3 PPLVFGVL 10
PP FGV+
Sbjct: 499 PPKKFGVI 506
233|Sequence|1161|1170|VFGVLDKDIS
>sp|PG034_VACCC|PROTEIN OPG034|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VFGVLDKDI 9
+F VLDKDI
Sbjct: 80 IFLVLDKDI 88
>sp|PG034_MONPV|PROTEIN OPG034|Monkeypox virus (MPXV)
Query: 1 VFGVLDKDI 9
+F VLDKDI
Sbjct: 68 IFLVLDKDI 76
>sp|PG144_VARV|VIRION membrane protein OPG144 precursor|Variola virus
Query: 3 GVLDKDI 9
GVLDKD+
Sbjct: 18 GVLDKDL 24
>sp|PG144_VAR67|VIRION membrane protein OPG144 precursor|Variola virus (isolate
Query: 3 GVLDKDI 9
GVLDKD+
Sbjct: 18 GVLDKDL 24
>sp|PG144_VACCC|VIRION membrane protein OPG144 precursor|Vaccinia virus (strain
Query: 3 GVLDKDI 9
GVLDKD+
Sbjct: 18 GVLDKDL 24
>sp|PG144_MONPV|VIRION membrane protein OPG144 precursor|Monkeypox virus (MPXV)
Query: 3 GVLDKDI 9
GVLDKD+
Sbjct: 18 GVLDKDL 24
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 VFGVLDK 7
+FG+LD+
Sbjct: 148 LFGILDR 154
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 FGVLDK 7
FGVLD+
Sbjct: 349 FGVLDQ 354
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 FGVLDKDI 9
FG+ DK+I
Sbjct: 1282 FGMADKNI 1289
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 VFGVLD 6
+FGV+D
Sbjct: 275 IFGVID 280
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 2 FGVLDKDIS 10
+GVL D+S
Sbjct: 410 YGVLSVDLS 418
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 FGVLDKDIS 10
+GVL D+S
Sbjct: 410 YGVLSVDLS 418
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 2 FGVLDKDIS 10
+GVL D+S
Sbjct: 410 YGVLSVDLS 418
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 2 FGVLDKDIS 10
+GVL D+S
Sbjct: 410 YGVLSVDLS 418
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 FGVLDKDIS 10
+GVL D+S
Sbjct: 410 YGVLSVDLS 418
234|Sequence|1166|1175|DKDISAETLL
>sp|REV_HV2SB|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 DKDISAETL 9
D+DIS ETL
Sbjct: 160 DRDISKETL 168
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 DKDISAETL 9
D+D +ETL
Sbjct: 201 DEDTGSETL 209
235|Sequence|1171|1180|AETLLALPEL
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 ETLLALPEL 10
E LLALP L
Sbjct: 432 ELLLALPRL 440
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 2 ETLLALP 8
ET+L+LP
Sbjct: 255 ETVLSLP 261
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 ETLLALPEL 10
E LLALP L
Sbjct: 432 ELLLALPRL 440
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 ETLLALPEL 10
E LLALP L
Sbjct: 432 ELLLALPRL 440
236|Sequence|1176|1185|ALPELYKSGQ
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 PELYKSGQ 10
P LYKSG+
Sbjct: 1561 PLLYKSGK 1568
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 PELYKSGQ 10
P LYKSG+
Sbjct: 1561 PLLYKSGK 1568
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 PELYKSGQ 10
P LYKSG+
Sbjct: 1561 PLLYKSGK 1568
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 2 LPELYKSG 9
L E+YKSG
Sbjct: 724 LIEMYKSG 731
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 2 LPELYKSG 9
L E+YKSG
Sbjct: 724 LIEMYKSG 731
>sp|KRB2_VACCC|PSEUDOKINASE OPG198|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ALPELYKSGQ 10
A+P+LY G+
Sbjct: 83 AIPDLYGIGE 92
Query: 4 ELYKSG 9
+LYKSG
Sbjct: 162 KLYKSG 167
>sp|KRB2_VACCA|PSEUDOKINASE OPG198|Vaccinia virus (strain Ankara) (VACV)
Query: 1 ALPELYKSGQ 10
A+P+LY G+
Sbjct: 83 AIPDLYGIGE 92
Query: 4 ELYKSG 9
+LYKSG
Sbjct: 162 KLYKSG 167
>sp|KRB2_MONPV|PSEUDOKINASE OPG198|Monkeypox virus (MPXV)
Query: 1 ALPELYKSGQ 10
A+P+LY G+
Sbjct: 83 AIPDLYGIGE 92
Query: 4 ELYKSG 9
+LYKSG
Sbjct: 162 KLYKSG 167
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 ALPELYK 7
A+P LYK
Sbjct: 6808 AMPNLYK 6814
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 ALPELYK 7
A+P LYK
Sbjct: 6785 AMPNLYK 6791
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 ALPELYK 7
A+P++YK
Sbjct: 6438 AMPQIYK 6444
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 4 ELYKSGQ 10
+LYKSG+
Sbjct: 707 DLYKSGK 713
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 ELYKSGQ 10
+LYKSG+
Sbjct: 707 DLYKSGK 713
>sp|VLTF2_VACCA|VIRAL late gene transcription factor|Vaccinia virus (strain Ankara)
Query: 2 LPELYKS 8
LP+ YKS
Sbjct: 31 LPKYYKS 37
>sp|VLTF2_VARV|VIRAL late gene transcription factor|Variola virus
Query: 2 LPELYKS 8
LP+ YKS
Sbjct: 31 LPKYYKS 37
>sp|VLTF2_VAR67|VIRAL late gene transcription factor|Variola virus (isolate
Query: 2 LPELYKS 8
LP+ YKS
Sbjct: 31 LPKYYKS 37
>sp|VLTF2_MONPV|VIRAL late gene transcription factor|Monkeypox virus (MPXV)
Query: 2 LPELYKS 8
LP+ YKS
Sbjct: 31 LPKYYKS 37
>sp|VLTF2_VACCC|VIRAL late gene transcription factor|Vaccinia virus (strain Copenhagen)
Query: 2 LPELYKS 8
LP+ YKS
Sbjct: 31 LPKYYKS 37
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 2 LPELYKSG 9
+PEL +SG
Sbjct: 165 MPELLESG 172
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 ALPELYKSGQ 10
A+ YK GQ
Sbjct: 364 AMVRFYKKGQ 373
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 ALPELYKSGQ 10
A+ YK GQ
Sbjct: 362 AMVRFYKKGQ 371
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 1 ALPELYKSGQ 10
ALP YK+ Q
Sbjct: 299 ALPLQYKNNQ 308
237|Sequence|1181|1190|YKSGQNSECY
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 KSGQNSECY 10
K+G++S CY
Sbjct: 545 KTGESSRCY 553
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 KSGQNSECY 10
K+G+ S CY
Sbjct: 550 KTGERSRCY 558
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 KSGQNSECY 10
K+G+ S CY
Sbjct: 546 KTGEKSRCY 554
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 KSGQNSECY 10
K+G+ S CY
Sbjct: 546 KTGEKSRCY 554
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 KSGQNSECY 10
K+G+ S CY
Sbjct: 547 KTGERSRCY 555
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 KSGQNSECY 10
K+G+ S CY
Sbjct: 546 KTGERSRCY 554
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 KSGQNSECY 10
KSG S C+
Sbjct: 231 KSGNGSSCW 239
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 KSGQNSECY 10
K+G S+C+
Sbjct: 231 KTGNKSQCW 239
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 3 SGQNSEC 9
SGQ EC
Sbjct: 248 SGQRGEC 254
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 3 SGQNSEC 9
SGQ EC
Sbjct: 248 SGQRGEC 254
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 KSGQNSECY 10
+SG N+E Y
Sbjct: 485 RSGLNTEAY 493
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 YKSGQNSEC 9
YK+ +N +C
Sbjct: 1135 YKTNKNGDC 1143
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 YKSGQNSEC 9
Y GQ S C
Sbjct: 851 YSGGQLSSC 859
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 KSGQNSECY 10
K+G S C+
Sbjct: 231 KTGNKSRCW 239
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 KSGQNSECY 10
K+G+ S+CY
Sbjct: 555 KTGECSKCY 563
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 2 KSGQNSECY 10
K+G+ S+CY
Sbjct: 553 KTGECSKCY 561
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 4 GQNSECY 10
G N EC+
Sbjct: 1309 GDNEECW 1315
>sp|KTHY_VARV|THYMIDYLATE kinase|Variola virus
Query: 2 KSGQNSEC 9
KSG+ ++C
Sbjct: 14 KSGKTTQC 21
>sp|KTHY_VAR67|THYMIDYLATE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 KSGQNSEC 9
KSG+ ++C
Sbjct: 14 KSGKTTQC 21
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 1 YKSGQNSEC 9
YK+G S C
Sbjct: 288 YKNGTASVC 296
>sp|SPIKE_ADE07|FIBER protein|Human adenovirus B serotype 7
Query: 1 YKSGQN 6
+KSGQN
Sbjct: 236 HKSGQN 241
>sp|KTHY_VACCT|THYMIDYLATE kinase|Vaccinia virus (strain Tian Tan)
Query: 2 KSGQNSEC 9
KSG+ ++C
Sbjct: 14 KSGKTTQC 21
>sp|KTHY_VACCC|THYMIDYLATE kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KSGQNSEC 9
KSG+ ++C
Sbjct: 14 KSGKTTQC 21
>sp|KTHY_VACCA|THYMIDYLATE kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 KSGQNSEC 9
KSG+ ++C
Sbjct: 14 KSGKTTQC 21
>sp|KTHY_MONPV|THYMIDYLATE kinase|Monkeypox virus (MPXV)
Query: 2 KSGQNSEC 9
KSG+ ++C
Sbjct: 14 KSGKTTQC 21
>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11
Query: 1 YKSGQN 6
+KSGQN
Sbjct: 218 HKSGQN 223
>sp|KTHY_CWPXB|THYMIDYLATE kinase|Cowpox virus (strain Brighton Red)
Query: 2 KSGQNSEC 9
KSG+ ++C
Sbjct: 14 KSGKTTQC 21
238|Sequence|1186|1195|NSECYNLSTF
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 1 NSECYN 6
NSECYN
Sbjct: 414 NSECYN 419
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 1 NSECYN 6
NSECYN
Sbjct: 414 NSECYN 419
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 4 CYNLS 8
CYNLS
Sbjct: 369 CYNLS 373
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 4 CYNLS 8
CYNLS
Sbjct: 369 CYNLS 373
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 4 CYNLS 8
CYNLS
Sbjct: 369 CYNLS 373
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 4 CYNLS 8
CYNLS
Sbjct: 369 CYNLS 373
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 CYNLS 8
CYNLS
Sbjct: 369 CYNLS 373
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 4 CYNLS 8
CYNLS
Sbjct: 369 CYNLS 373
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 4 CYNLS 8
CYNLS
Sbjct: 369 CYNLS 373
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 4 CYNLS 8
CYNLS
Sbjct: 369 CYNLS 373
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 4 CYNLS 8
CYNLS
Sbjct: 369 CYNLS 373
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 NSECYNLSTF 10
+++C+N TF
Sbjct: 272 HAQCFNEGTF 281
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 YNLSTF 10
YNL+TF
Sbjct: 628 YNLTTF 633
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 YNLSTF 10
YNL+TF
Sbjct: 628 YNLTTF 633
>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SECYN 6
SECYN
Sbjct: 17 SECYN 21
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 NSECYNLSTF 10
N+E YN T+
Sbjct: 225 NTELYNPQTY 234
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 NSECYNLST 9
+S+C NL+T
Sbjct: 12 SSQCVNLTT 20
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 3 ECYN 6
ECYN
Sbjct: 285 ECYN 288
>sp|NEF_HV2CA|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 ECYN 6
ECYN
Sbjct: 30 ECYN 33
239|Sequence|1191|1200|NLSTFWISMV
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 2 LSTFWIS 8
LS+FW+S
Sbjct: 121 LSSFWVS 127
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 2 LSTFWIS 8
LS+FW+S
Sbjct: 121 LSSFWVS 127
>sp|U79_HHV7J|PROTEIN U79|Human herpesvirus 7 (strain JI)
Query: 2 LSTFWISMV 10
LS WISM+
Sbjct: 51 LSNGWISMI 59
>sp|NSS_TOSV|NON-STRUCTURAL protein NS-S|Toscana virus (Tos)
Query: 2 LSTFW 6
LSTFW
Sbjct: 275 LSTFW 279
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 2 LSTFWISMV 10
S WISM+
Sbjct: 51 FSKGWISMI 59
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 2 LSTFWISMV 10
S WISM+
Sbjct: 51 FSKGWISMI 59
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 NLSTFW 6
N+S FW
Sbjct: 738 NMSIFW 743
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 NLSTFW 6
N+S FW
Sbjct: 738 NMSIFW 743
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 3 STFWISM 9
S+FW S+
Sbjct: 879 SSFWTSL 885
>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)
Query: 1 NLSTFWISM 9
N+S W++M
Sbjct: 118 NVSRCWVAM 126
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 WISMV 10
WISM+
Sbjct: 55 WISMI 59
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 3 STFWISMV 10
STFW+ V
Sbjct: 459 STFWLQPV 466
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 3 STFWI 7
STFW+
Sbjct: 462 STFWL 466
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 NLSTFWISM 9
N+S W++M
Sbjct: 234 NVSRCWVAM 242
240|Sequence|1196|1205|WISMVDAFYQ
>sp|PG095_VARV|ENTRY-FUSION complex associated protein OPG095|Variola virus
Query: 1 WISMVDAFYQ 10
W + +D F++
Sbjct: 228 WTTYMDTFFR 237
>sp|PG095_VAR67|ENTRY-FUSION complex associated protein OPG095|Variola virus (isolate
Query: 1 WISMVDAFYQ 10
W + +D F++
Sbjct: 228 WTTYMDTFFR 237
>sp|PG095_VACCC|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain
Query: 1 WISMVDAFYQ 10
W + +D F++
Sbjct: 228 WTTYMDTFFR 237
>sp|PG095_VACCA|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain Ankara)
Query: 1 WISMVDAFYQ 10
W + +D F++
Sbjct: 228 WTTYMDTFFR 237
>sp|PG095_MONPV|ENTRY-FUSION complex associated protein OPG095|Monkeypox virus (MPXV)
Query: 1 WISMVDAFYQ 10
W + +D F++
Sbjct: 228 WTTYMDTFFR 237
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 WISMVD 6
W+ MVD
Sbjct: 3666 WLDMVD 3671
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 WISMVDAF 8
W+ VD F
Sbjct: 1856 WVGSVDCF 1863
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 1 WISMVD 6
W+ MVD
Sbjct: 197 WMKMVD 202
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 WISMVDAF 8
W+ VD F
Sbjct: 1856 WVGSVDCF 1863
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 WISMVD 6
W+ MVD
Sbjct: 3666 WLDMVD 3671
>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P
Query: 1 WISMVDAF 8
W+S D F
Sbjct: 165 WVSQDDGF 172
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 WISMVDAF 8
W+ +D F
Sbjct: 1856 WVGSIDCF 1863
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 WISMVDAFY 9
W + V+AF+
Sbjct: 14 WANAVNAFH 22
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 WISMVDAF 8
W S +DA
Sbjct: 1088 WFSYIDAL 1095
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WISMVD 6
WI +VD
Sbjct: 653 WIKLVD 658
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 WISMVDAF 8
W S +DA
Sbjct: 1088 WFSYIDAL 1095
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 WISMVDAF 8
W S +DA
Sbjct: 1088 WFSYIDAL 1095
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 WISMVDAF 8
W S +DA
Sbjct: 1088 WFSYIDAL 1095
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 WISMVDAF 8
W S +DA
Sbjct: 1088 WFSYIDAL 1095
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 WISMVDAF 8
W+S +D F
Sbjct: 1992 WLSGLDTF 1999
241|Sequence|1201|1210|DAFYQSLICF
>sp|NSP2_ROTHD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 1 DAFYQSLI 8
D FY S+I
Sbjct: 41 DKFYNSII 48
>sp|NSP2_ROTH7|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United
Query: 1 DAFYQSLI 8
D FY S+I
Sbjct: 41 DKFYNSII 48
>sp|NSP2_ROTH6|NON-STRUCTURAL protein 2|Rotavirus A (strain
Query: 1 DAFYQSLI 8
D FY S+I
Sbjct: 41 DKFYNSII 48
>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 AFYQSLIC 9
A +QSL C
Sbjct: 87 AHFQSLFC 94
>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 AFYQSLIC 9
A +QSL C
Sbjct: 87 AHFQSLFC 94
>sp|NSP2_ROT41|NON-STRUCTURAL protein 2|Rotavirus A (isolate
Query: 1 DAFYQSLI 8
D FY S+I
Sbjct: 41 DKFYNSII 48
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 1 DAFYQSLICF 10
D FY CF
Sbjct: 367 DVFYAIFNCF 376
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 DAFYQSLICF 10
DAFY S + +
Sbjct: 516 DAFYNSSLMY 525
>sp|NSP2_ROTHK|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 1 DAFYQSLI 8
D FY S+I
Sbjct: 41 DKFYNSII 48
>sp|NSP2_ROTHT|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 1 DAFYQSLI 8
D FY S+I
Sbjct: 41 DKFYNSII 48
>sp|NSP2_ROTAD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 1 DAFYQSLI 8
D FY S+I
Sbjct: 41 DKFYNSII 48
>sp|NSP2_ROTWI|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United
Query: 1 DAFYQSLI 8
D FY S+I
Sbjct: 41 DKFYNSII 48
>sp|NSP2_ROTHL|NON-STRUCTURAL protein 2|Rotavirus A (strain
Query: 1 DAFYQSLI 8
D FY S+I
Sbjct: 41 DKFYNSII 48
>sp|NSP2_ROTH3|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 1 DAFYQSLI 8
D FY S+I
Sbjct: 41 DKFYNSII 48
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 DAFYQSLICF 10
D FY CF
Sbjct: 367 DMFYAIFNCF 376
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 295 DRFYKSL 301
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 300 DRFYKSL 306
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 300 DRFYKSL 306
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 300 DRFYKSL 306
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 298 DRFYKSL 304
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 300 DRFYKSL 306
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 301 DRFYKSL 307
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 295 DRFYKSL 301
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 295 DRFYKSL 301
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 300 DRFYKSL 306
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 300 DRFYKSL 306
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 300 DRFYKSL 306
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 295 DRFYKSL 301
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 300 DRFYKSL 306
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 300 DRFYKSL 306
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 300 DRFYKSL 306
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 298 DRFYKSL 304
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 300 DRFYKSL 306
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 301 DRFYKSL 307
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 295 DRFYKSL 301
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 295 DRFYKSL 301
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 300 DRFYKSL 306
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 300 DRFYKSL 306
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DAFYQSL 7
D FY+SL
Sbjct: 300 DRFYKSL 306
>sp|A18_VACCT|TRANSCRIPT termination protein A18|Vaccinia virus (strain Tian Tan)
Query: 2 AFYQSLICF 10
A+Y ++C+
Sbjct: 224 AYYPPMMCY 232
>sp|PG145_VARV|TRANSCRIPT termination protein OPG145|Variola virus
Query: 2 AFYQSLICF 10
A+Y ++C+
Sbjct: 224 AYYPPMMCY 232
>sp|PG145_VAR67|TRANSCRIPT termination protein OPG145|Variola virus (isolate
Query: 2 AFYQSLICF 10
A+Y ++C+
Sbjct: 224 AYYPPMMCY 232
>sp|A18_CWPXG|TRANSCRIPT termination protein A18|Cowpox virus (strain GRI-90 /
Query: 2 AFYQSLICF 10
A+Y ++C+
Sbjct: 224 AYYPPMMCY 232
>sp|PG145_MONPV|TRANSCRIPT termination protein OPG145|Monkeypox virus (MPXV)
Query: 2 AFYQSLICF 10
A+Y ++C+
Sbjct: 224 AYYPPMMCY 232
>sp|PG145_VACCC|TRANSCRIPT termination protein OPG145|Vaccinia virus (strain Copenhagen)
Query: 2 AFYQSLICF 10
A+Y ++C+
Sbjct: 224 AYYPPMMCY 232
>sp|A18_VACCA|TRANSCRIPT termination protein A18|Vaccinia virus (strain Ankara) (VACV)
Query: 2 AFYQSLICF 10
A+Y ++C+
Sbjct: 224 AYYPPMMCY 232
>sp|NSP2_ROTHP|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 1 DAFYQSLI 8
D FY S++
Sbjct: 41 DKFYNSIV 48
>sp|NSP2_ROTHW|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 1 DAFYQSLI 8
D FY S++
Sbjct: 41 DKFYNSIV 48
242|Sequence|1206|1215|SLICFFIPYL
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 ICFFIPYL 10
+CFF+PY
Sbjct: 2508 LCFFMPYF 2515
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 ICFFIPYL 10
+CFF+PY
Sbjct: 2508 LCFFMPYF 2515
>sp|EBNA1_EBVA8|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SLICFFIPYL 10
S++C+FI +L
Sbjct: 557 SIVCYFIVFL 566
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 SLICFFI 7
S++CFFI
Sbjct: 207 SIVCFFI 213
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 1 SLICFFIPYL 10
L+ FF PYL
Sbjct: 2 DLVSFFNPYL 11
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 2 LICFFIPY 9
LIC PY
Sbjct: 495 LICVICPY 502
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 SLICFFIPYL 10
+L+C PYL
Sbjct: 2120 TLLCQLWPYL 2129
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 3 ICFFIPYL 10
+ FF PYL
Sbjct: 4 VSFFNPYL 11
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 3 ICFFI 7
ICFFI
Sbjct: 207 ICFFI 211
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 3 ICFFIPYL 10
+ FF PYL
Sbjct: 4 VSFFNPYL 11
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 SLICFFIPYL 10
+L+C PYL
Sbjct: 2118 NLLCNLWPYL 2127
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 3 ICFFI 7
ICFFI
Sbjct: 207 ICFFI 211
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 3 ICFFI 7
ICFFI
Sbjct: 207 ICFFI 211
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 3 ICFFI 7
ICFFI
Sbjct: 207 ICFFI 211
>sp|NSP2_ROTWI|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United
Query: 2 LICFFIPYL 10
L CF P+L
Sbjct: 4 LACFCYPHL 12
>sp|NSP2_ROTHW|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 2 LICFFIPYL 10
L CF P+L
Sbjct: 4 LACFCYPHL 12
>sp|NSP2_ROTHT|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 2 LICFFIPYL 10
L CF P+L
Sbjct: 4 LACFCYPHL 12
>sp|NSP2_ROTHP|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 2 LICFFIPYL 10
L CF P+L
Sbjct: 4 LACFCYPHL 12
>sp|NSP2_ROTHL|NON-STRUCTURAL protein 2|Rotavirus A (strain
Query: 2 LICFFIPYL 10
L CF P+L
Sbjct: 4 LACFCYPHL 12
>sp|NSP2_ROTHK|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 2 LICFFIPYL 10
L CF P+L
Sbjct: 4 LACFCYPHL 12
>sp|NSP2_ROTHD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 2 LICFFIPYL 10
L CF P+L
Sbjct: 4 LACFCYPHL 12
>sp|NSP2_ROTH7|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United
Query: 2 LICFFIPYL 10
L CF P+L
Sbjct: 4 LACFCYPHL 12
>sp|NSP2_ROTH6|NON-STRUCTURAL protein 2|Rotavirus A (strain
Query: 2 LICFFIPYL 10
L CF P+L
Sbjct: 4 LACFCYPHL 12
>sp|NSP2_ROTH3|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 2 LICFFIPYL 10
L CF P+L
Sbjct: 4 LACFCYPHL 12
>sp|NSP2_ROTAD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 2 LICFFIPYL 10
L CF P+L
Sbjct: 4 LACFCYPHL 12
>sp|NSP2_ROT41|NON-STRUCTURAL protein 2|Rotavirus A (isolate
Query: 2 LICFFIPYL 10
L CF P+L
Sbjct: 4 LACFCYPHL 12
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 LICFFIP 8
++C+F+P
Sbjct: 1001 VLCWFMP 1007
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 5 FFIPYL 10
FF PYL
Sbjct: 2 FFNPYL 7
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain
Query: 5 FFIPYL 10
FF PYL
Sbjct: 2 FFNPYL 7
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 SLICFFI 7
SLICF+
Sbjct: 9 SLICFYT 15
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 CFFIP 8
CFF P
Sbjct: 214 CFFTP 218
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 2 LICFFI 7
++CFF+
Sbjct: 208 IVCFFV 213
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 2 LICFFI 7
++CFF+
Sbjct: 208 IVCFFV 213
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 2 LICFFI 7
++CFF+
Sbjct: 208 IVCFFV 213
243|Sequence|1211|1220|FIPYLAYKGS
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 1 FIPYLAYKGS 10
F PY Y GS
Sbjct: 666 FDPYFTYSGS 675
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 1 FIPYLAYKGS 10
F PY Y GS
Sbjct: 686 FDPYFVYSGS 695
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 1 FIPYLAYKGS 10
F PY Y GS
Sbjct: 680 FDPYFVYSGS 689
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 1 FIPYLAYKGS 10
F PY Y GS
Sbjct: 687 FDPYFVYSGS 696
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 1 FIPYLAYKGS 10
F PY Y GS
Sbjct: 683 FDPYFVYSGS 692
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 1 FIPYLAYKGS 10
F PY Y GS
Sbjct: 668 FDPYFTYSGS 677
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 FIPYLAYK 8
++PY+ YK
Sbjct: 86 YVPYVGYK 93
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 1 FIPYLAYK 8
++PY+ YK
Sbjct: 86 YVPYVGYK 93
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FIPYLAYK 8
++PY+ YK
Sbjct: 86 YVPYVGYK 93
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 1 FIPYLAYK 8
++PY+ YK
Sbjct: 86 YVPYVGYK 93
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 1 FIPYLAYK 8
++PY+ YK
Sbjct: 86 YVPYVGYK 93
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 1 FIPYLAYK 8
++PY+ YK
Sbjct: 86 YVPYVGYK 93
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 1 FIPYLAYKGS 10
F PY Y G+
Sbjct: 662 FDPYFVYSGT 671
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 3 PYLAY 7
PYLAY
Sbjct: 346 PYLAY 350
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 3 PYLAY 7
PYLAY
Sbjct: 346 PYLAY 350
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 3 PYLAY 7
PYLAY
Sbjct: 348 PYLAY 352
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 FIPYLAYK 8
FIP AY+
Sbjct: 666 FIPMRAYR 673
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 3 PYLAYKGS 10
PY Y GS
Sbjct: 697 PYYTYSGS 704
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 3 PYLAYKGS 10
PY Y GS
Sbjct: 713 PYYTYSGS 720
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 183 VPYICTKG 190
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 190 VPYICTKG 197
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 190 VPYICTKG 197
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 181 VPYICTKG 188
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 182 VPYICTKG 189
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 190 VPYICTKG 197
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 182 VPYICAKG 189
>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 190 VPYICTKG 197
>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 190 VPYICTKG 197
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 190 VPYICTKG 197
>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 190 VPYICTKG 197
>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 190 VPYICTKG 197
>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 175 VPYICTKG 182
>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 190 VPYICTKG 197
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 190 VPYICTKG 197
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 190 VPYICTKG 197
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 IPYLAY 7
IP++AY
Sbjct: 428 IPFIAY 433
>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 190 VPYICTKG 197
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 3 PYLAY 7
PY+AY
Sbjct: 347 PYIAY 351
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 IPYLAY 7
IP++AY
Sbjct: 402 IPFIAY 407
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 187 VPYICTKG 194
>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 185 VPYICTKG 192
>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 190 VPYICAKG 197
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 2 IPYLAY 7
IP++AY
Sbjct: 398 IPFIAY 403
>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)
Query: 2 IPYLAYKG 9
+PY+ KG
Sbjct: 175 VPYICTKG 182
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PYLAYKGS 10
PYL+Y S
Sbjct: 283 PYLSYTTS 290
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 YLAYKGS 10
Y+AY GS
Sbjct: 4130 YVAYAGS 4136
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 YLAYKGS 10
Y+AY GS
Sbjct: 4130 YVAYAGS 4136
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 PYLAY 7
PY+AY
Sbjct: 347 PYIAY 351
244|Sequence|1216|1225|AYKGSDIDVF
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 AYKGSDID 8
AY+GSD+D
Sbjct: 501 AYEGSDVD 508
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 AYKGSDID 8
AY+GSD+D
Sbjct: 501 AYEGSDVD 508
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 AYKGSDID 8
AY+GSD+D
Sbjct: 501 AYEGSDVD 508
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 AYKGSDID 8
AY+GSD+D
Sbjct: 501 AYEGSDVD 508
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 AYKGSDID 8
AY+GSD+D
Sbjct: 501 AYEGSDVD 508
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 AYKGSDID 8
A++GSDID
Sbjct: 501 AFEGSDID 508
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 AYKGSDID 8
+Y+GSD+D
Sbjct: 501 SYEGSDVD 508
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 AYKGSDID 8
AYKG D+D
Sbjct: 2029 AYKGIDLD 2036
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 AYKGSDID 8
AYKG D+D
Sbjct: 2030 AYKGIDLD 2037
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2046 YKGIDLDQF 2054
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2046 YKGIDLDQF 2054
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2045 YKGIDLDQF 2053
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2047 YKGIDLDQF 2055
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2045 YKGIDLDQF 2053
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2055 YKGIDLDQF 2063
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2043 YKGIDLDQF 2051
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2048 YKGIDLDQF 2056
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2036 YKGIDLDQF 2044
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2036 YKGIDLDQF 2044
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2037 YKGIDLDQF 2045
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2035 YKGIDLDQF 2043
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2035 YKGIDLDQF 2043
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2037 YKGIDLDQF 2045
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2037 YKGIDLDQF 2045
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2039 YKGIDLDQF 2047
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2034 YKGIDLDQF 2042
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 YKGSDIDVF 10
YKG D+D F
Sbjct: 2053 YKGIDLDQF 2061
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 AYKGSDID 8
AY+GS++D
Sbjct: 501 AYEGSEVD 508
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 AYKGSDID 8
AY+GS++D
Sbjct: 501 AYEGSEVD 508
>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16
Query: 1 AYKGSDID 8
AY+G D+D
Sbjct: 256 AYEGIDVD 263
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 2 YKGSDIDV 9
Y G+DI+V
Sbjct: 200 YHGTDINV 207
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 YKGSDIDVF 10
YKG DVF
Sbjct: 1836 YKGPVTDVF 1844
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 YKGSDIDVF 10
YKG DVF
Sbjct: 1859 YKGPITDVF 1867
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 YKGSDID 8
YKG D+D
Sbjct: 2057 YKGIDLD 2063
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 YKGSDID 8
YKG D+D
Sbjct: 2059 YKGIDLD 2065
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 YKGSDID 8
YKG D+D
Sbjct: 2061 YKGIDLD 2067
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 YKGSDID 8
YKG D+D
Sbjct: 2061 YKGIDLD 2067
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 YKGSDID 8
YKG D+D
Sbjct: 2066 YKGIDLD 2072
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 YKGSDID 8
YKG D+D
Sbjct: 2058 YKGIDLD 2064
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 YKGSDID 8
YKG D+D
Sbjct: 2058 YKGIDLD 2064
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 YKGSDID 8
YKG D+D
Sbjct: 2058 YKGIDLD 2064
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 YKGSDIDVF 10
YKG DVF
Sbjct: 1836 YKGPVTDVF 1844
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 YKGSDI 7
YKG+DI
Sbjct: 844 YKGNDI 849
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 YKGSDI 7
YKG+DI
Sbjct: 844 YKGNDI 849
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 YKGSDIDVF 10
YKG DVF
Sbjct: 1859 YKGPITDVF 1867
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 2 YKGSDID 8
Y G DID
Sbjct: 404 YTGPDID 410
>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 GSDIDV 9
GSD+D+
Sbjct: 174 GSDVDI 179
>sp|UL22A_HCMVM|GLYCOPROTEIN UL22A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YKGSDIDVF 10
Y G D DV
Sbjct: 66 YSGGDYDVL 74
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 YKGSDIDV 9
Y GSD++V
Sbjct: 764 YLGSDMEV 771
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 2 YKGSDI 7
Y GSDI
Sbjct: 410 YSGSDI 415
>sp|VL2_HPV55|MINOR capsid protein L2|Human papillomavirus type 55
Query: 1 AYKGSDIDV 9
AY+G D+ +
Sbjct: 254 AYEGEDVSL 262
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 4 GSDIDVF 10
G D+DV+
Sbjct: 374 GPDVDVY 380
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 4 GSDIDVF 10
G D+DV+
Sbjct: 374 GPDVDVY 380
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 776 YVGSDLEI 783
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 785 YVGSDLEI 792
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 775 YVGSDLEI 782
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 769 YVGSDLEI 776
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 776 YVGSDLEI 783
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 768 YVGSDLEI 775
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 773 YVGSDLEI 780
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 772 YVGSDLEI 779
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 772 YVGSDLEI 779
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 776 YVGSDLEI 783
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 774 YVGSDLEI 781
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 772 YVGSDLEI 779
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 775 YVGSDLEI 782
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 770 YVGSDLEI 777
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 781 YVGSDLEI 788
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 780 YVGSDLEI 787
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 774 YVGSDLEI 781
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 775 YVGSDLEI 782
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 779 YVGSDLEI 786
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 775 YVGSDLEI 782
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 779 YVGSDLEI 786
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 775 YVGSDLEI 782
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 787 YVGSDLEI 794
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 775 YVGSDLEI 782
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 787 YVGSDLEI 794
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 787 YVGSDLEI 794
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 777 YVGSDLEI 784
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 775 YVGSDLEI 782
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 770 YVGSDLEI 777
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 770 YVGSDLEI 777
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 770 YVGSDLEI 777
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 771 YVGSDLEI 778
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YKGSDIDV 9
Y GSD+++
Sbjct: 775 YVGSDLEI 782
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 KGSDIDVF 10
KGSD++ +
Sbjct: 2378 KGSDVESY 2385
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 KGSDIDVF 10
KGSD++ +
Sbjct: 2378 KGSDVESY 2385
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 KGSDIDVF 10
KGSD++ +
Sbjct: 2378 KGSDVESY 2385
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 AYKGSDID 8
AYK D+D
Sbjct: 2001 AYKNIDLD 2008
>sp|VL2_HPV44|MINOR capsid protein L2|Human papillomavirus 44
Query: 1 AYKGSDI 7
AY+G D+
Sbjct: 254 AYEGEDV 260
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 AYKGSDID 8
AYK D+D
Sbjct: 2015 AYKNIDLD 2022
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 AYKGSDID 8
AYK D+D
Sbjct: 2008 AYKNIDLD 2015
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 AYKGSDID 8
AYK D+D
Sbjct: 2008 AYKNIDLD 2015
245|Sequence|1221|1230|DIDVFTFGTP
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 1 DIDVFTF 7
DID FTF
Sbjct: 631 DIDQFTF 637
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 2 IDVFTFGTP 10
++VF FG P
Sbjct: 401 VEVFYFGRP 409
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 DIDVFTFGTP 10
DID+ G+P
Sbjct: 1977 DIDILMEGSP 1986
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 1 DIDVFTFGTP 10
DI++FTF P
Sbjct: 135 DIELFTFRDP 144
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 2 IDVFTFGTP 10
I FT+ TP
Sbjct: 267 IAFFTYSTP 275
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 IDVFTFGTP 10
I FT+ TP
Sbjct: 267 IAFFTYSTP 275
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DVFTFG 8
D FTFG
Sbjct: 223 DYFTFG 228
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 4 VFTFGTP 10
V TFG P
Sbjct: 435 VLTFGAP 441
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 3 DVFTFG 8
D FTFG
Sbjct: 223 DYFTFG 228
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 3 DVFTFG 8
D FTFG
Sbjct: 223 DYFTFG 228
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 3 DVFTFG 8
D FTFG
Sbjct: 223 DYFTFG 228
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 3 DVFTFG 8
D FTFG
Sbjct: 223 DYFTFG 228
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 2 IDVFTFGT 9
+D+F F T
Sbjct: 431 VDLFVFST 438
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 2 IDVFTFGT 9
+D+F F T
Sbjct: 430 VDLFVFST 437
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 4 VFTFGT 9
VFT+GT
Sbjct: 292 VFTWGT 297
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 4 VFTFGTP 10
VF FG P
Sbjct: 708 VFRFGDP 714
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 DIDVFTF 7
DI+ FTF
Sbjct: 631 DIEQFTF 637
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 1 DIDVFTF 7
DI+ FTF
Sbjct: 631 DIEQFTF 637
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 4 VFTFGTP 10
VF FG P
Sbjct: 708 VFRFGDP 714
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 4 VFTFGTP 10
VF FG P
Sbjct: 708 VFRFGDP 714
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 DIDVFTF 7
DI+ FTF
Sbjct: 631 DIEQFTF 637
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 DIDVFTF 7
DI+ FTF
Sbjct: 631 DIEQFTF 637
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DIDVFTF 7
DI+ FTF
Sbjct: 631 DIEQFTF 637
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DIDVFTF 7
DI+ FTF
Sbjct: 623 DIEQFTF 629
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 DIDVFTF 7
DI+ FTF
Sbjct: 631 DIEQFTF 637
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 DIDVFTF 7
DI+ FTF
Sbjct: 631 DIEQFTF 637
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DIDVFTFGTP 10
D+D+ GTP
Sbjct: 1827 DLDMAITGTP 1836
246|Sequence|1226|1235|TFGTPINTIS
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 TFGTPIN 7
TFG P+N
Sbjct: 1637 TFGQPVN 1643
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 TFGTPINTIS 10
TFG P N S
Sbjct: 1308 TFGVPYNPQS 1317
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 TFGTPINTIS 10
TFG P N S
Sbjct: 1306 TFGVPYNPQS 1315
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 TFGTPINTIS 10
TFG P N S
Sbjct: 1307 TFGVPYNPQS 1316
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 TFGTPINTIS 10
TFG P N S
Sbjct: 1307 TFGVPYNPQS 1316
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 TFGTPIN 7
TFG P N
Sbjct: 1306 TFGVPYN 1312
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 4 TPINTIS 10
+PINTI+
Sbjct: 93 SPINTIA 99
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 3 GTPIN 7
GTPIN
Sbjct: 170 GTPIN 174
>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)
Query: 2 FGTPINTIS 10
FG P++T++
Sbjct: 298 FGHPVDTVT 306
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 GTPIN 7
GTPIN
Sbjct: 1171 GTPIN 1175
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 2 FGTPINTIS 10
+ +PINTI+
Sbjct: 91 YVSPINTIA 99
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 FGTPIN 7
+GTP+N
Sbjct: 625 WGTPLN 630
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 3 GTPIN 7
GTP+N
Sbjct: 170 GTPVN 174
>sp|NCAP_SARS2|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 3 GTPINTIS 10
G PINT S
Sbjct: 71 GVPINTNS 78
247|Sequence|1231|1240|INTISLTTIL
***** No hits found ******
248|Sequence|1236|1245|LTTILLHQAM
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LTTILLHQ 8
+TT+LLH+
Sbjct: 486 VTTVLLHE 493
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 TILLHQAM 10
T L HQAM
Sbjct: 161 TSLYHQAM 168
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 TILLHQAM 10
T L HQAM
Sbjct: 158 TSLYHQAM 165
>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11
Query: 1 LTTILLHQA 9
L ++LLH+A
Sbjct: 38 LESVLLHKA 46
>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34
Query: 1 LTTILLHQA 9
L +LLH+A
Sbjct: 39 LENVLLHKA 47
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 1 LTTILLHQA 9
+T +LLH A
Sbjct: 468 VTRVLLHAA 476
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 1 LTTILLHQAM 10
LTT ++H+A+
Sbjct: 510 LTTPVVHRAL 519
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 LTTILLHQAM 10
LTT ++H+A+
Sbjct: 510 LTTPVVHRAL 519
249|Sequence|1241|1250|LHQAMEMKTW
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 HQAMEMKTW 10
H+A +K W
Sbjct: 817 HKAKHIKAW 825
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 HQAMEMKTW 10
H+A +K W
Sbjct: 804 HKAKHVKAW 812
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 3 QAMEMKTW 10
+AM++ TW
Sbjct: 610 RAMQLITW 617
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 2 HQAMEMK 8
HQA+EM+
Sbjct: 70 HQAIEMQ 76
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 1 LHQAMEMKTW 10
L+ A+E TW
Sbjct: 297 LNCALESSTW 306
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 1 LHQAMEMKTW 10
L+ A+E TW
Sbjct: 297 LNCALESSTW 306
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 2 HQAMEMK 8
HQA+EM+
Sbjct: 70 HQAIEMQ 76
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 HQAMEMKTW 10
H+A K W
Sbjct: 811 HKAKHTKAW 819
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 HQAMEMKTW 10
H+A K W
Sbjct: 806 HKAKHTKAW 814
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 HQAMEMKTW 10
H+A K W
Sbjct: 811 HKAKHTKAW 819
250|Sequence|1246|1255|EMKTWTIFHG
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 5 WTIFHG 10
WT+FHG
Sbjct: 1080 WTVFHG 1085
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 WTIFHG 10
WT+FHG
Sbjct: 1079 WTVFHG 1084
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 WTIFHG 10
WT+FHG
Sbjct: 1079 WTVFHG 1084
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 5 WTIFHG 10
WT+FHG
Sbjct: 1083 WTVFHG 1088
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 5 WTIFHG 10
WT+FHG
Sbjct: 1083 WTVFHG 1088
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 5 WTIFHG 10
WT+FHG
Sbjct: 1080 WTLFHG 1085
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1085 WTVYHG 1090
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1079 WTVYHG 1084
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1079 WTVYHG 1084
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1077 WTVYHG 1082
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1079 WTVYHG 1084
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1079 WTVYHG 1084
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1079 WTVYHG 1084
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1083 WTVYHG 1088
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1083 WTVYHG 1088
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1087 WTVYHG 1092
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1079 WTVYHG 1084
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1081 WTVYHG 1086
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1079 WTVYHG 1084
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1083 WTVYHG 1088
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1084 WTVYHG 1089
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1084 WTVYHG 1089
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1083 WTVYHG 1088
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1085 WTVYHG 1090
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1084 WTVYHG 1089
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1079 WTVYHG 1084
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1083 WTVYHG 1088
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1079 WTVYHG 1084
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1083 WTVYHG 1088
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1079 WTVYHG 1084
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 5 WTIFHG 10
WT++HG
Sbjct: 1079 WTVYHG 1084
>sp|NCAP_SARS|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 4 TWTIFHG 10
TW +HG
Sbjct: 330 TWLTYHG 336
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 1 EMKTWTIFH 9
E W++FH
Sbjct: 343 ENSYWSVFH 351
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 3 KTWTIFH 9
K WTIF+
Sbjct: 296 KWWTIFY 302
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 3 KTWTIFH 9
K WTIF+
Sbjct: 296 KWWTIFY 302
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 5 WTIFHG 10
WT+++G
Sbjct: 1080 WTVYYG 1085
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 4 TWTIF 8
TWT+F
Sbjct: 711 TWTLF 715
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 5 WTIFH 9
W++FH
Sbjct: 347 WSLFH 351
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 5 WTIFH 9
W++FH
Sbjct: 347 WSLFH 351
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 EMKTWTIF 8
+++ WT+F
Sbjct: 168 DLQMWTLF 175
>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15
Query: 1 EMKTW 5
EM+TW
Sbjct: 232 EMQTW 236
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 1 EMKTWTIF 8
+++ WT+F
Sbjct: 168 DLQMWTLF 175
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 EMKTWTIF 8
+++ WT+F
Sbjct: 168 DLQMWTLF 175
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 1 EMKTWTIF 8
+++ WT+F
Sbjct: 168 DLQMWTLF 175
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 EMKTWT 6
E+KTW+
Sbjct: 2353 EVKTWS 2358
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 MKTWTIFHG 10
MKT FH
Sbjct: 398 MKTLAFFHA 406
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 MKTWTIFHG 10
MKT FH
Sbjct: 398 MKTLAFFHA 406
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 MKTWTIFHG 10
MKT FH
Sbjct: 398 MKTLAFFHA 406
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 2 MKTWT 6
M+TWT
Sbjct: 327 MQTWT 331
>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain
Query: 2 MKTWTIF 8
+K WT+F
Sbjct: 54 LKQWTLF 60
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 MKTWTIFH 9
MKT FH
Sbjct: 396 MKTLAFFH 403
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 MKTWTIFH 9
MKT FH
Sbjct: 396 MKTLAFFH 403
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 MKTWTIFH 9
MKT FH
Sbjct: 397 MKTLAFFH 404
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 5 WTIFH 9
W +FH
Sbjct: 673 WVLFH 677
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 WTIFH 9
W +FH
Sbjct: 673 WVLFH 677
>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)
Query: 1 EMKTWTIF 8
+MK W ++
Sbjct: 122 DMKVWELY 129
>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)
Query: 1 EMKTWTIF 8
+MK W ++
Sbjct: 122 DMKVWELY 129
>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)
Query: 1 EMKTWTIF 8
+MK W ++
Sbjct: 122 DMKVWELY 129
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 5 WTIFHG 10
W +F+G
Sbjct: 165 WALFYG 170
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 4 TWTIFHG 10
TW HG
Sbjct: 104 TWRCLHG 110
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 4 TWTIFHG 10
TW HG
Sbjct: 104 TWRCLHG 110
>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus
Query: 3 KTWTIF 8
K WT++
Sbjct: 308 KNWTVY 313
>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate
Query: 3 KTWTIF 8
K WT++
Sbjct: 308 KNWTVY 313
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 3 KTWTIF 8
K WT++
Sbjct: 308 KNWTVY 313
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 KTWTIF 8
K WT++
Sbjct: 308 KNWTVY 313
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 3 KTWTIF 8
K WT++
Sbjct: 308 KNWTVY 313
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 3 KTWTIF 8
K WT++
Sbjct: 308 KNWTVY 313
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 3 KTWTIF 8
K WT++
Sbjct: 308 KNWTVY 313
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 3 KTWTIF 8
K WT++
Sbjct: 308 KNWTVY 313
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 EMKTWTIFHG 10
++ W +F G
Sbjct: 341 DISAWPLFEG 350
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 EMKTWTIFHG 10
++ W +F G
Sbjct: 341 DISAWPLFEG 350
251|Sequence|1251|1260|TIFHGVVLLG
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 HGVVLL 9
HG+VLL
Sbjct: 281 HGIVLL 286
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 HGVVLL 9
HG+VLL
Sbjct: 281 HGIVLL 286
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 5 GVVLLG 10
GVVLLG
Sbjct: 1164 GVVLLG 1169
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 5 GVVLLG 10
GVVLLG
Sbjct: 1164 GVVLLG 1169
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 GVVLLG 10
GVVLLG
Sbjct: 1164 GVVLLG 1169
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 5 GVVLLG 10
GVVLLG
Sbjct: 1164 GVVLLG 1169
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 5 GVVLLG 10
GVVLLG
Sbjct: 1164 GVVLLG 1169
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 TIFHG 5
T+FHG
Sbjct: 1084 TVFHG 1088
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 TIFHG 5
T+FHG
Sbjct: 1081 TVFHG 1085
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TIFHG 5
T+FHG
Sbjct: 1080 TVFHG 1084
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TIFHG 5
T+FHG
Sbjct: 1080 TVFHG 1084
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 TIFHG 5
T+FHG
Sbjct: 1084 TVFHG 1088
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 3 FHGVVLLG 10
F GV++LG
Sbjct: 7 FVGVIILG 14
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 3 FHGVVLLG 10
F GV++LG
Sbjct: 7 FVGVIILG 14
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 3 FHGVVLLG 10
F GV++LG
Sbjct: 7 FVGVIILG 14
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 TIFHG 5
T+FHG
Sbjct: 1081 TLFHG 1085
>sp|E4OR1_ADE09|E4-ORF1 adenovirus D serotype 9
Query: 4 HGVVLL 9
HGVVLL
Sbjct: 39 HGVVLL 44
252|Sequence|1256|1265|VVLLGSFLMY
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 VLLGSF 7
VLLGSF
Sbjct: 1321 VLLGSF 1326
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 VLLGSFLMY 10
+L+G+ LM+
Sbjct: 756 ILIGTLLMW 764
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 LGSFLMY 10
LGS +MY
Sbjct: 2839 LGSIIMY 2845
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 VVLLGSFLM 9
VVLLG+ L+
Sbjct: 1165 VVLLGAMLV 1173
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 VVLLGSFLM 9
VVLLG+ L+
Sbjct: 1165 VVLLGAMLV 1173
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 VVLLGSFLM 9
VVLLG+ L+
Sbjct: 1165 VVLLGAMLV 1173
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 VVLLGSFLM 9
VVLLG+ L+
Sbjct: 1165 VVLLGAMLV 1173
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 VVLLGSFLM 9
VVLLG+ L+
Sbjct: 1165 VVLLGAMLV 1173
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 VLLGSFLMY 10
++ GS+L+Y
Sbjct: 260 LIYGSYLLY 268
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VLLGSFLMY 10
++ GS+L+Y
Sbjct: 260 LIYGSYLLY 268
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VLLGSFLMY 10
++ GS+L+Y
Sbjct: 260 LIYGSYLLY 268
253|Sequence|1261|1270|SFLMYFLVSL
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SFLMYFLVSL 10
S+LM+F++S+
Sbjct: 2339 SWLMWFIISI 2348
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 SFLMYFLVSL 10
S+LM+F++S+
Sbjct: 2339 SWLMWFIISI 2348
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 MYFLVSL 10
+YFL+SL
Sbjct: 4 IYFLISL 10
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 1 SFLMYF 6
SF+MYF
Sbjct: 441 SFVMYF 446
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 1 SFLMYF 6
SF+MYF
Sbjct: 426 SFVMYF 431
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 FLMYFLVSL 10
L Y LVSL
Sbjct: 8 LLFYLLVSL 16
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LMYFLV 8
L+YFLV
Sbjct: 621 LLYFLV 626
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LMYFLV 8
L+YFLV
Sbjct: 627 LLYFLV 632
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 FLMYFLVSL 10
FL+YF+ +
Sbjct: 2096 FLLYFVAQM 2104
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 1 SFLMYF 6
SFL YF
Sbjct: 436 SFLSYF 441
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 1 SFLMYF 6
SFL YF
Sbjct: 437 SFLSYF 442
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 FLMYFLVSL 10
FL+YF+ +
Sbjct: 2096 FLLYFVAQM 2104
254|Sequence|1266|1275|FLVSLLYNAT
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 1 FLVSLLYNAT 10
F+ LLYN T
Sbjct: 194 FVYFLLYNTT 203
255|Sequence|1271|1280|LYNATCVICN
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
LYN TCVI
Sbjct: 78 LYNTTCVI 85
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
LYN TCVI
Sbjct: 78 LYNTTCVI 85
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
LYN CVI
Sbjct: 78 LYNTVCVI 85
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
LYN CVI
Sbjct: 78 LYNTVCVI 85
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LYNATCVI 8
LYN CV+
Sbjct: 917 LYNGCCVV 924
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LYNATCVI 8
LYN CV+
Sbjct: 917 LYNGCCVV 924
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 5 TCVIC 9
TCVIC
Sbjct: 1176 TCVIC 1180
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 5 TCVIC 9
TCVIC
Sbjct: 1176 TCVIC 1180
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 5 TCVIC 9
TCVIC
Sbjct: 1176 TCVIC 1180
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNTVCVI 85
>sp|OX2V_HHV6Z|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6B (strain
Query: 2 YNATCVIC 9
Y+ATC+ C
Sbjct: 119 YDATCLTC 126
>sp|OX2V_HHV6U|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6A (strain
Query: 2 YNATCVIC 9
Y+ATC+ C
Sbjct: 118 YDATCLTC 125
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 NATCVIC 9
N TC++C
Sbjct: 222 NYTCIVC 228
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 NATCVIC 9
N TC++C
Sbjct: 222 NYTCIVC 228
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 NATCVIC 9
N TC++C
Sbjct: 222 NYTCIVC 228
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 NATCVIC 9
N TC++C
Sbjct: 222 NYTCIVC 228
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 NATCVIC 9
N TC++C
Sbjct: 222 NYTCIVC 228
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 NATCVIC 9
N TC++C
Sbjct: 222 NYTCIVC 228
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNIVCVI 85
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 LYNATCVI 8
L+N CVI
Sbjct: 78 LFNIVCVI 85
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 2 YNATCVI 8
YN TC I
Sbjct: 346 YNGTCAI 352
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 NATCVI 8
N TCVI
Sbjct: 144 NGTCVI 149
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 NATCVI 8
N TCVI
Sbjct: 144 NGTCVI 149
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 NATCVI 8
N TCVI
Sbjct: 144 NGTCVI 149
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 NATCVI 8
N TCVI
Sbjct: 142 NGTCVI 147
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 NATCVI 8
N TCVI
Sbjct: 144 NGTCVI 149
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 NATCVI 8
N TCVI
Sbjct: 144 NGTCVI 149
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 NATCVI 8
N TCVI
Sbjct: 144 NGTCVI 149
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 3 NATCVI 8
N TCVI
Sbjct: 144 NGTCVI 149
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 NATCVI 8
N TCVI
Sbjct: 144 NGTCVI 149
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 YNATCVI 8
YN TC I
Sbjct: 345 YNGTCAI 351
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 5 TCVICN 10
TC +CN
Sbjct: 162 TCPLCN 167
>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)
Query: 5 TCVICN 10
TC +CN
Sbjct: 152 TCPLCN 157
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 LYNATCVI 8
LYN C+I
Sbjct: 894 LYNGLCLI 901
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LYNATCVI 8
LYN C+I
Sbjct: 894 LYNGLCLI 901
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain
Query: 5 TCVIC 9
TC IC
Sbjct: 18 TCTIC 22
>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)
Query: 1 LYNATCV 7
LYN++C+
Sbjct: 341 LYNSSCI 347
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 NATCVI 8
N TC+I
Sbjct: 145 NGTCII 150
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 2 YNATCV 7
YNA C+
Sbjct: 47 YNAVCL 52
>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 5 TCVICN 10
TC+ C+
Sbjct: 134 TCIFCD 139
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 NATCVI 8
NATC+I
Sbjct: 1681 NATCII 1686
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 NATCVI 8
NATC+I
Sbjct: 1681 NATCII 1686
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 YNATC 6
YN TC
Sbjct: 1682 YNVTC 1686
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 YNATC 6
YN TC
Sbjct: 1682 YNVTC 1686
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 YNATCVIC 9
Y TC++C
Sbjct: 701 YVITCILC 708
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 LYNATCVI 8
LYN C++
Sbjct: 894 LYNGLCLV 901
>sp|CEP1_EBVG|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 YNATCVICN 10
+NA CV N
Sbjct: 35 HNAICVATN 43
>sp|CEP1_EBVB9|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 YNATCVICN 10
+NA CV N
Sbjct: 35 HNAICVATN 43
>sp|CEP1_EBVA8|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 YNATCVICN 10
+NA CV N
Sbjct: 35 HNAICVATN 43
256|Sequence|1276|1285|CVICNSPTNP
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CVICNSPTN 9
CV+CNS T+
Sbjct: 5306 CVLCNSQTS 5314
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CVICNSPTN 9
CV+CNS T+
Sbjct: 5329 CVLCNSQTS 5337
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 CVICNSPTN 9
CV+ N P N
Sbjct: 732 CVVVNPPLN 740
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CVICNSPTN 9
CV+C+S T+
Sbjct: 5302 CVVCSSQTS 5310
Query: 4 CNSPT 8
CN+PT
Sbjct: 4144 CNTPT 4148
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 CVICNSPTN 9
CV+C+S T+
Sbjct: 5360 CVVCSSQTS 5368
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 CVICNSPTN 9
CV+C+S T+
Sbjct: 5390 CVVCSSQTS 5398
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 CVICNSPTN 9
CV+C+S T+
Sbjct: 5340 CVVCSSQTS 5348
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 2 VICNSPTNP 10
V N+PTNP
Sbjct: 295 VTGNTPTNP 303
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 CVICNSPTN 9
CV+C+S T+
Sbjct: 5315 CVVCHSQTS 5323
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 2 VICNSPTNP 10
V N+P+NP
Sbjct: 303 VTGNAPSNP 311
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 VICNSPTN 9
+IC PTN
Sbjct: 929 IICEKPTN 936
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 4 CNSPTNP 10
C++P NP
Sbjct: 544 CSNPENP 550
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 3 ICNSPTNP 10
+ N P NP
Sbjct: 114 VSNQPNNP 121
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 VICNSPTN 9
+IC PTN
Sbjct: 928 IICERPTN 935
>sp|M2_I69A0|MATRIX protein 2|Influenza A virus (strain A/England/878/1969
Query: 4 CNSPTNP 10
CN +NP
Sbjct: 19 CNDSSNP 25
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 VICNSPT 8
+ICN+PT
Sbjct: 1189 IICNNPT 1195
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 VICNSPT 8
+ICN+PT
Sbjct: 1186 IICNNPT 1192
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 CVICNSPT 8
CV+C S T
Sbjct: 5000 CVVCGSQT 5007
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 1 CVICNSPTNP 10
C +C S NP
Sbjct: 118 CALCPSTENP 127
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CVICNSPT 8
CV+C S T
Sbjct: 4975 CVVCGSQT 4982
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 CVICNSPT 8
C+IC PT
Sbjct: 1611 CMICLKPT 1618
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 4 CNSPTNP 10
CNS T P
Sbjct: 281 CNSNTTP 287
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 CNSPT 8
CN+PT
Sbjct: 4144 CNTPT 4148
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 CVICNSP 7
CVI +SP
Sbjct: 1179 CVILDSP 1185
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CVICNSP 7
CVI N P
Sbjct: 1540 CVIANVP 1546
Query: 1 CVICNSPT 8
CV N PT
Sbjct: 1872 CVTSNVPT 1879
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 3 ICNSPTNP 10
+C P NP
Sbjct: 387 LCKVPLNP 394
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 3 ICNSPT 8
+CN PT
Sbjct: 1086 LCNDPT 1091
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 CVICNS 6
C+IC S
Sbjct: 1385 CLICES 1390
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CVICNSPTNP 10
C I +S TNP
Sbjct: 434 CAINHSITNP 443
257|Sequence|1281|1290|SPTNPYWVME
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 2 PTNPYWVM 9
PT+P+W +
Sbjct: 137 PTSPFWFL 144
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PTNPYWVM 9
PT+P+W +
Sbjct: 137 PTSPFWFL 144
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 2 PTNPYWVM 9
PT+P+W +
Sbjct: 137 PTSPFWFL 144
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 SPTNPYWVME 10
+P+N +W+ E
Sbjct: 959 TPSNNWWISE 968
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 TNPYWV 8
TNP WV
Sbjct: 409 TNPNWV 414
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PTNPY 6
PTNPY
Sbjct: 663 PTNPY 667
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PTNPY 6
PTNPY
Sbjct: 664 PTNPY 668
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PTNPY 6
PTNPY
Sbjct: 663 PTNPY 667
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PTNPY 6
PTNPY
Sbjct: 663 PTNPY 667
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PTNPY 6
PTNPY
Sbjct: 664 PTNPY 668
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PTNPY 6
PTNPY
Sbjct: 662 PTNPY 666
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PTNPY 6
PTNPY
Sbjct: 663 PTNPY 667
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 PTNPYWVM 9
PT P +VM
Sbjct: 2232 PTGPAYVM 2239
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PTNPY 6
PTNPY
Sbjct: 663 PTNPY 667
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PTNPY 6
PTNPY
Sbjct: 661 PTNPY 665
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PTNPY 6
PTNPY
Sbjct: 663 PTNPY 667
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PTNPY 6
PTNPY
Sbjct: 662 PTNPY 666
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PTNPY 6
PTNPY
Sbjct: 661 PTNPY 665
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 PTNPYWVM 9
PT P +VM
Sbjct: 2232 PTGPAYVM 2239
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 SPTNPYWVM 9
+P N YW++
Sbjct: 75 TPPNDYWIL 83
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 SPTNPYWVM 9
+P N YW++
Sbjct: 75 TPPNDYWIL 83
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 4 NPYWVM 9
+PYW++
Sbjct: 158 SPYWML 163
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 SPTNPYWVM 9
+P N YW++
Sbjct: 75 TPPNGYWIL 83
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 PTNPYWV 8
PTN W+
Sbjct: 373 PTNTLWL 379
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PTNPYWVM 9
PT+P W +
Sbjct: 140 PTSPSWFI 147
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PTNPYWVM 9
PT+P W +
Sbjct: 140 PTSPSWFI 147
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PTNPYWVM 9
PT+P W +
Sbjct: 140 PTSPSWFI 147
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 2 PTNPYWV 8
PTN W+
Sbjct: 373 PTNTLWL 379
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 TNPYWV 8
TNP W+
Sbjct: 2021 TNPLWL 2026
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 TNPYWV 8
TNP W+
Sbjct: 2021 TNPLWL 2026
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 TNPYWV 8
TNP W+
Sbjct: 2021 TNPLWL 2026
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 2 PTNPY 6
P NPY
Sbjct: 118 PNNPY 122
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 TNPYWV 8
TNP W+
Sbjct: 2021 TNPLWL 2026
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 2 PTNPY 6
P NPY
Sbjct: 118 PNNPY 122
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 TNPYWVM 9
TN Y+VM
Sbjct: 488 TNAYYVM 494
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 4 NPYW 7
NPYW
Sbjct: 71 NPYW 74
>sp|EBNA2_EBVA8|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PTNPYW 7
PTNPY
Sbjct: 32 PTNPYQ 37
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 PTNPYWVM 9
P N YW++
Sbjct: 76 PPNDYWLL 83
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 PTNPYWVM 9
P N YW++
Sbjct: 76 PPNDYWLL 83
>sp|ORF24_TTVV7|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 SPTNPYWVME 10
+PT+ W ME
Sbjct: 220 APTSGDWAME 229
258|Sequence|1286|1295|YWVMEGQLSN
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 WVMEGQLS 9
WV EGQ++
Sbjct: 520 WVAEGQMT 527
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 YWVMEGQLSN 10
Y+++ GQL N
Sbjct: 25 YYILHGQLPN 34
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 YWVMEGQLSN 10
Y+++ GQL N
Sbjct: 25 YYILHGQLPN 34
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 YWVMEGQLSN 10
Y+++ GQL N
Sbjct: 25 YYILHGQLPN 34
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 YWVMEGQLS 9
YWV G+L+
Sbjct: 641 YWVNSGKLA 649
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 WVMEGQLSN 10
WV+ G+L N
Sbjct: 683 WVLCGELVN 691
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 4 MEGQLSN 10
+EGQL+N
Sbjct: 608 LEGQLNN 614
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 YWVMEGQL 8
YW EG+L
Sbjct: 405 YWGSEGRL 412
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 YWVMEGQL 8
YW EG+L
Sbjct: 405 YWGSEGRL 412
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 YWVMEGQL 8
YW EG+L
Sbjct: 405 YWGSEGRL 412
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 YWVMEGQL 8
YW EG+L
Sbjct: 405 YWGSEGRL 412
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 YWVMEGQL 8
YW EG+L
Sbjct: 405 YWGSEGRL 412
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 YWVMEGQL 8
YW EG+L
Sbjct: 405 YWGSEGRL 412
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 YWVMEGQL 8
YW EG+L
Sbjct: 405 YWGSEGRL 412
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster
Query: 2 WVMEGQLS 9
W GQL+
Sbjct: 24 WTQSGQLT 31
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster
Query: 2 WVMEGQLS 9
W GQL+
Sbjct: 24 WTQSGQLT 31
>sp|U18_HHV6U|PUTATIVE immediate early glycoprotein|Human herpesvirus 6A (strain
Query: 2 WVMEGQLSN 10
W+ +GQ +N
Sbjct: 160 WISDGQDAN 168
259|Sequence|1291|1300|GQLSNPTFYL
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 1 GQLSNPTFYL 10
G NP+FYL
Sbjct: 126 GDTENPSFYL 135
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 GQLSNPTFY 9
G+L+NP F+
Sbjct: 691 GELTNPPFH 699
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 1 GQLSNPTFYL 10
G NP+FYL
Sbjct: 126 GDTENPSFYL 135
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 1 GQLSNPTF 8
GQ++NP F
Sbjct: 389 GQVTNPQF 396
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 1 GQLSNPTF 8
GQ++NP F
Sbjct: 389 GQVTNPQF 396
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 QLSNPTFYL 10
Q SNP F+L
Sbjct: 159 QQSNPKFFL 167
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 GQLSNPTFY 9
G+L NP F+
Sbjct: 687 GELVNPPFH 695
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 GQLSNPTFY 9
G+L+NP ++
Sbjct: 694 GELTNPPYH 702
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 GQLSNPTFY 9
G+L+NP ++
Sbjct: 694 GELTNPPYH 702
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQMSRPMF 562
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 GQLSNPTFYL 10
G++SN TF++
Sbjct: 889 GKVSNNTFHV 898
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 548 GQVSRPMF 555
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 551 GQVSRPMF 558
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 548 GQVSRPMF 555
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 532 GQVSRPMF 539
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I01A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 78 GQVSRPMF 85
>sp|PA_I01A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 78 GQVSRPMF 85
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPMF 562
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 GQLSNPTF 8
GQ+S P F
Sbjct: 555 GQVSRPIF 562
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 4 SNPTFY 9
+NPTFY
Sbjct: 503 TNPTFY 508
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 4 SNPTFY 9
+NPTFY
Sbjct: 503 TNPTFY 508
>sp|PG065_VAR67|RNA-BINDING protein OPG065|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 GQLSNPTFY 9
G ++PTFY
Sbjct: 141 GPSNSPTFY 149
>sp|PG065_VACCC|RNA-BINDING protein OPG065|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GQLSNPTFY 9
G ++PTFY
Sbjct: 141 GPSNSPTFY 149
>sp|PG065_MONPV|RNA-BINDING protein OPG065|Monkeypox virus (MPXV)
Query: 1 GQLSNPTFY 9
G ++PTFY
Sbjct: 104 GPSNSPTFY 112
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 GQLSNPTFY 9
G L+NP F+
Sbjct: 1116 GTLNNPEFW 1124
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 SNPTFYL 10
SNP FY+
Sbjct: 330 SNPVFYV 336
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 SNPTFYL 10
SNP FY+
Sbjct: 330 SNPVFYV 336
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 3 LSNPTFY 9
LS+P FY
Sbjct: 1986 LSDPVFY 1992
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 5 NPTFY 9
NPTFY
Sbjct: 509 NPTFY 513
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 SNPTFY 9
S PTFY
Sbjct: 999 SKPTFY 1004
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 4 SNPTFY 9
S PTFY
Sbjct: 999 SKPTFY 1004
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 4 SNPTFY 9
S PTFY
Sbjct: 999 SRPTFY 1004
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 4 SNPTFY 9
S PTFY
Sbjct: 998 SRPTFY 1003
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 SNPTFY 9
S PTFY
Sbjct: 998 SRPTFY 1003
>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35
Query: 3 LSNPTF 8
+SNPTF
Sbjct: 120 ISNPTF 125
>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11
Query: 3 LSNPTF 8
+SNPTF
Sbjct: 120 ISNPTF 125
>sp|E321_ADE1A|EARLY E3 20.2 kDa glycoprotein|Human adenovirus B serotype 11
Query: 3 LSNPTF 8
+SNPTF
Sbjct: 120 ISNPTF 125
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 GQLSNPTF 8
G+L PTF
Sbjct: 619 GRLKEPTF 626
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 QLSNPTF 8
+LSNP F
Sbjct: 873 RLSNPLF 879
>sp|PG055_VARV|PROTEIN OPG055|Variola virus
Query: 3 LSNPTFYL 10
LSN FYL
Sbjct: 347 LSNLDFYL 354
>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 LSNPTFYL 10
LSN FYL
Sbjct: 347 LSNLDFYL 354
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 NPTFY 9
NP+FY
Sbjct: 2572 NPSFY 2576
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 5 NPTFY 9
NP+FY
Sbjct: 2545 NPSFY 2549
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 5 NPTFY 9
NP+FY
Sbjct: 2550 NPSFY 2554
260|Sequence|1296|1305|PTFYLVCFLT
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 2 TFYLVCF 8
T YL+CF
Sbjct: 229 TLYLLCF 235
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 2 TFYLVCF 8
T YL+CF
Sbjct: 233 TLYLLCF 239
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 2 TFYLVCF 8
T YL+CF
Sbjct: 229 TLYLLCF 235
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 1 PTFYLVCFL 9
PT LVC L
Sbjct: 177 PTMRLVCML 185
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 2 TFYLVCF 8
+ YL+CF
Sbjct: 231 SLYLLCF 237
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 2 TFYLVCF 8
+ YL+CF
Sbjct: 230 SLYLLCF 236
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 2 TFYLVCF 8
+ YL+CF
Sbjct: 229 SLYLLCF 235
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 2 TFYLVCF 8
+ YL+CF
Sbjct: 231 SLYLLCF 237
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 5 LVCFLT 10
LVCFL+
Sbjct: 1301 LVCFLS 1306
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 5 LVCFLT 10
LVCFL+
Sbjct: 1301 LVCFLS 1306
>sp|EBNA2_EBVB9|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PTFYL 5
PTFYL
Sbjct: 2 PTFYL 6
>sp|EBNA2_EBVG|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PTFYL 5
PTFYL
Sbjct: 2 PTFYL 6
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 2 TFYLVCF 8
+ +LVCF
Sbjct: 229 SLFLVCF 235
>sp|TAT_HV1RH|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 6 VCFLT 10
VCFLT
Sbjct: 36 VCFLT 40
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PTFYLVC 7
P F LVC
Sbjct: 788 PAFLLVC 794
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 PTFYLVC 7
P F LVC
Sbjct: 786 PAFLLVC 792
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 3 FYLVCF 8
YL+CF
Sbjct: 233 LYLLCF 238
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 3 FYLVCF 8
YL+CF
Sbjct: 235 LYLLCF 240
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PTFYLVC 7
P F LVC
Sbjct: 788 PAFLLVC 794
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 3 FYLVCF 8
YL+CF
Sbjct: 228 LYLLCF 233
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 3 FYLVCF 8
YL+CF
Sbjct: 235 LYLLCF 240
>sp|TAT_HV1ET|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 5 LVCFLT 10
LVCFLT
Sbjct: 35 LVCFLT 40
>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 TFYLVCF 8
T+Y CF
Sbjct: 109 TYYFDCF 115
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 FYLVCF 8
FY VC+
Sbjct: 1691 FYQVCY 1696
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 FYLVCF 8
FY VC+
Sbjct: 1691 FYQVCY 1696
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 3 FYLVCF 8
YL+CF
Sbjct: 231 LYLLCF 236
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 2 TFYLVCFL 9
++YL C L
Sbjct: 356 SYYLTCIL 363
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 4 YLVCF 8
YL+CF
Sbjct: 1541 YLLCF 1545
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 4 YLVCF 8
YL+CF
Sbjct: 1541 YLLCF 1545
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 4 YLVCF 8
YL+CF
Sbjct: 1541 YLLCF 1545
261|Sequence|1301|1310|VCFLTPVVAL
>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)
Query: 2 CFLTP 6
CFLTP
Sbjct: 42 CFLTP 46
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 VCFLTP 6
VCF TP
Sbjct: 871 VCFATP 876
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 VCFLTP 6
VCF TP
Sbjct: 871 VCFATP 876
>sp|PG132_VARV|VIRION morphogenesis protein OPG132|Variola virus
Query: 1 VCFLTPVV 8
VC +TP +
Sbjct: 50 VCVITPTI 57
>sp|PG132_VAR67|VIRION morphogenesis protein OPG132|Variola virus (isolate
Query: 1 VCFLTPVV 8
VC +TP +
Sbjct: 50 VCVITPTI 57
>sp|PG132_MONPV|VIRION morphogenesis protein OPG132|Monkeypox virus (MPXV)
Query: 1 VCFLTPVV 8
VC +TP +
Sbjct: 50 VCVITPTI 57
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 FLTPVVAL 10
FL P++AL
Sbjct: 276 FLVPLIAL 283
>sp|PG132_VACCC|VIRION morphogenesis protein OPG132|Vaccinia virus (strain Copenhagen)
Query: 1 VCFLTPVV 8
VC +TP +
Sbjct: 50 VCAITPTI 57
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 VCFLTPVVAL 10
+C ++P+ L
Sbjct: 898 LCLISPITTL 907
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VCFLTPVVAL 10
+C ++P+ L
Sbjct: 898 LCLISPITTL 907
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 CFLTP 6
C+LTP
Sbjct: 24 CYLTP 28
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CFLTP 6
C+LTP
Sbjct: 24 CYLTP 28
262|Sequence|1306|1315|PVVALLPRYF
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 VALLPRYF 10
V+LLP YF
Sbjct: 783 VSLLPLYF 790
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 PVVALLPR 8
P V LPR
Sbjct: 365 PAVGFLPR 372
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 2 VVALLPRYF 10
+ ALL R+F
Sbjct: 121 IFALLSRFF 129
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 2 VVALLPRYF 10
+ ALL R+F
Sbjct: 121 IFALLSRFF 129
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 PVVALLPRY 9
P VAL+ RY
Sbjct: 910 PNVALVTRY 918
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PVVALLPRY 9
P V LL RY
Sbjct: 464 PAVDLLERY 472
263|Sequence|1311|1320|LPRYFFLSLQ
>sp|UL131_HCMVA|UNCHARACTERIZED protein UL131|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RYFFLSLQ 10
+ FFLSLQ
Sbjct: 8 KAFFLSLQ 15
>sp|NCAP_CVHOC|NUCLEOPROTEIN coronavirus OC43 (HCoV-OC43)
Query: 1 LPRYFFLSL 9
LPR++F L
Sbjct: 120 LPRWYFYYL 128
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 1 LPRYFFLS 8
LP++F+ S
Sbjct: 530 LPKFFYAS 537
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 2 PRYFFLSL 9
P++ FLS+
Sbjct: 174 PKHLFLSM 181
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 2 PRYFF 6
PRYF+
Sbjct: 609 PRYFY 613
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 2 PRYFF 6
PRYF+
Sbjct: 609 PRYFY 613
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 2 PRYFF 6
PRYF+
Sbjct: 608 PRYFY 612
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 2 PRYFF 6
PRYF+
Sbjct: 608 PRYFY 612
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 3 RYFFLSL 9
R FFLSL
Sbjct: 167 RQFFLSL 173
>sp|VP40_EBOZM|MATRIX protein VP40|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 LPRYFFLSL 9
LP+YF L
Sbjct: 168 LPQYFTFDL 176
>sp|VP40_EBOZ5|MATRIX protein VP40|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 LPRYFFLSL 9
LP+YF L
Sbjct: 168 LPQYFTFDL 176
>sp|VP40_EBOG4|MATRIX protein VP40|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 LPRYFFLSL 9
LP+YF L
Sbjct: 168 LPQYFTFDL 176
>sp|NCAP_CVHN1|NUCLEOPROTEIN coronavirus HKU1 (isolate N1)
Query: 1 LPRYFF 6
LPR++F
Sbjct: 119 LPRWYF 124
>sp|VP40_EBORE|MATRIX protein VP40|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 LPRYFFLSL 9
LP+YF L
Sbjct: 168 LPQYFTFDL 176
>sp|VP40_EBORR|MATRIX protein VP40|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 LPRYFFLSL 9
LP+YF L
Sbjct: 168 LPQYFTFDL 176
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 1 LPRYFF 6
LPR++F
Sbjct: 119 LPRWYF 124
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 1 LPRYFF 6
LPR++F
Sbjct: 119 LPRWYF 124
>sp|VP40_EBOSU|MATRIX protein VP40|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 LPRYFFLSL 9
LP+YF L
Sbjct: 168 LPQYFTFDL 176
264|Sequence|1316|1325|FLSLQGTCGK
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 SLQGTCG 9
S QG CG
Sbjct: 1847 SFQGLCG 1853
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 3 SLQGTCG 9
S QG CG
Sbjct: 1844 SFQGLCG 1850
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 5 QGTCG 9
QG+CG
Sbjct: 104 QGSCG 108
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 5 QGTCG 9
+GTCG
Sbjct: 828 EGTCG 832
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 1 FLSLQGTC 8
FL+ GTC
Sbjct: 41 FLADSGTC 48
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 1 FLSLQGTC 8
FL+ GTC
Sbjct: 41 FLADSGTC 48
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 2 LSLQGTCG 9
+SL+GTC
Sbjct: 107 VSLKGTCN 114
265|Sequence|1321|1330|GTCGKSLISK
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 GTCGKSLISK 10
G CG LISK
Sbjct: 1667 GMCGGLLISK 1676
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 GTCGKSLISK 10
G CG LISK
Sbjct: 1668 GMCGGLLISK 1677
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 GTCGKSLISK 10
G CG LISK
Sbjct: 1676 GMCGGLLISK 1685
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GTCGKSLIS 9
G CG +LIS
Sbjct: 1689 GMCGGALIS 1697
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GTCGKSLIS 9
G CG +LIS
Sbjct: 1689 GMCGGALIS 1697
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GTCGKSLIS 9
G CG +LIS
Sbjct: 1687 GMCGGALIS 1695
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 CGKSLIS 9
CGKSL++
Sbjct: 1218 CGKSLVT 1224
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GTCGKSLIS 9
G CG +L+S
Sbjct: 1689 GMCGGALVS 1697
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GTCGKSLIS 9
G CG +L+S
Sbjct: 1689 GMCGGALVS 1697
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GTCGKSLIS 9
G CG +L+S
Sbjct: 1689 GMCGGALVS 1697
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GTCGKSLIS 9
G CG +L+S
Sbjct: 1523 GMCGGALVS 1531
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GTCGKSLIS 9
G CG +L+S
Sbjct: 1689 GMCGGALVS 1697
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GTCGKSLIS 9
G CG +L+S
Sbjct: 1689 GMCGGALVS 1697
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GTCGKSLIS 9
G CG +L+S
Sbjct: 1689 GMCGGALVS 1697
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 CGKSLI 8
CGKSL+
Sbjct: 2 CGKSLL 7
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 3 CGKSLIS 9
CGKS+++
Sbjct: 342 CGKSMLT 348
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 CGKSLIS 9
CGKS+++
Sbjct: 342 CGKSMLT 348
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 3 CGKSLIS 9
CGKS+++
Sbjct: 342 CGKSMLT 348
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 TCGKS 6
TCGKS
Sbjct: 1685 TCGKS 1689
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 TCGKS 6
TCGKS
Sbjct: 1685 TCGKS 1689
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 3 CGKSLIS 9
CGKS+ +
Sbjct: 441 CGKSMFA 447
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 2 TCGKSLIS 9
TCGK+ ++
Sbjct: 279 TCGKNRVT 286
266|Sequence|1326|1335|SLISKAQKID
***** No hits found ******
267|Sequence|1331|1340|AQKIDKLPPD
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 1 AQKIDKLPPD 10
A+K DK+ PD
Sbjct: 97 ARKGDKITPD 106
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 1 AQKIDKLPPD 10
A+K DK+ PD
Sbjct: 97 ARKGDKITPD 106
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 AQKIDKLPPD 10
A+K DK+ PD
Sbjct: 97 ARKGDKITPD 106
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 1 AQKIDKLPPD 10
A+K DK+ PD
Sbjct: 97 ARKGDKITPD 106
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 2 QKIDKLPP 9
+K+D LPP
Sbjct: 49 EKVDLLPP 56
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 KIDKLP 8
KIDKLP
Sbjct: 1669 KIDKLP 1674
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 IDKLPPD 10
+DK PP+
Sbjct: 6283 VDKYPPN 6289
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 AQKIDKL 7
AQKIDK
Sbjct: 1135 AQKIDKF 1141
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 1 AQKIDKLPPD 10
+ KID PP+
Sbjct: 588 SDKIDFFPPN 597
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 AQKIDKLPPD 10
+ KID PP+
Sbjct: 588 SDKIDFFPPN 597
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 1 AQKIDKLPPD 10
+ KID PP+
Sbjct: 588 SDKIDFFPPN 597
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 1 AQKIDKLPPD 10
+ KID PP+
Sbjct: 588 SDKIDFFPPN 597
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 AQKIDKLPPD 10
+ KID PP+
Sbjct: 588 SDKIDFFPPN 597
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 AQKIDKLPPD 10
+ KID PP+
Sbjct: 588 SDKIDFFPPN 597
>sp|CEP1_HHV7J|CYTOPLASMIC envelopment protein 1|Human herpesvirus 7 (strain JI)
Query: 4 IDKLPP 9
+DK+PP
Sbjct: 179 LDKVPP 184
268|Sequence|1336|1345|KLPPDKRNLE
>sp|VCCL3_HHV8P|PROTEIN vCCL3|Human herpesvirus 8 type P
Query: 1 KLPPDK 6
+LPPDK
Sbjct: 46 RLPPDK 51
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 KLPPDKRNL 9
K+PP ++NL
Sbjct: 1737 KMPPSEQNL 1745
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PDKRNLE 10
PD +NLE
Sbjct: 447 PDNQNLE 453
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PDKRNLE 10
PD +NLE
Sbjct: 447 PDNQNLE 453
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 2 LPPDKRNL 9
LPPD++ L
Sbjct: 18 LPPDRKRL 25
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 KLPPDKRNLE 10
+LPP+ RN++
Sbjct: 2588 QLPPNPRNVQ 2597
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 KLPPDKRNLE 10
+LPP+ RN++
Sbjct: 2566 QLPPNPRNVQ 2575
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 KLPPDKRNLE 10
+LPP+ RN++
Sbjct: 2561 QLPPNPRNVQ 2570
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 1 KLPPDK 6
K+PPD+
Sbjct: 660 KIPPDQ 665
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 LPPDKRNLE 10
LPPD ++ +
Sbjct: 1256 LPPDPKHFD 1264
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 LPPDKRNLE 10
LPPD ++ +
Sbjct: 1257 LPPDPKHFD 1265
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KLPPD 5
KLPPD
Sbjct: 450 KLPPD 454
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KLPPD 5
KLPPD
Sbjct: 450 KLPPD 454
>sp|TRM2_HHV6Z|TRIPARTITE terminase subunit 2|Human herpesvirus 6B (strain Z29)
Query: 4 PDKRNLE 10
P+K NLE
Sbjct: 6 PEKTNLE 12
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KLPPDKR 7
++PPD+R
Sbjct: 592 QVPPDER 598
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KLPPDKR 7
++PPD+R
Sbjct: 592 QVPPDER 598
>sp|TRM2_HHV6U|TRIPARTITE terminase subunit 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PDKRNLE 10
P+K NLE
Sbjct: 6 PEKTNLE 12
269|Sequence|1341|1350|KRNLEIQSWR
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RNLEIQSWR 10
R E+Q+WR
Sbjct: 1390 RQKEVQAWR 1398
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 RNLEIQSWR 10
R E+Q+WR
Sbjct: 1363 RQKEVQAWR 1371
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 RNLEIQSWR 10
R E+Q+WR
Sbjct: 1368 RQKEVQAWR 1376
>sp|VL2_HPV37|MINOR capsid protein L2|Human papillomavirus 37
Query: 1 KRNLEIQSW 9
+ + E+QSW
Sbjct: 229 QESFEMQSW 237
>sp|VL2_HPV17|MINOR capsid protein L2|Human papillomavirus 17
Query: 1 KRNLEIQSW 9
+ + E+QSW
Sbjct: 229 QESFEMQSW 237
>sp|PG061_VACCC|PROTEIN OPG061|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KRNLEIQSWR 10
++NLE +W+
Sbjct: 47 EKNLEFDTWK 56
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 KRNLEIQSW 9
K LEI++W
Sbjct: 1814 KAGLEIRAW 1822
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 KRNLEIQSW 9
K LEI++W
Sbjct: 1814 KAGLEIRAW 1822
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 KRNLEIQSW 9
K LEI++W
Sbjct: 1814 KAGLEIRAW 1822
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 KRNLEIQSW 9
K LEI++W
Sbjct: 1814 KAGLEIRAW 1822
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 KRNLEIQSW 9
K LEI++W
Sbjct: 1814 KAGLEIRAW 1822
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 KRNLEIQSW 9
K LEI++W
Sbjct: 1814 KAGLEIRAW 1822
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 KRNLEIQSW 9
K LEI++W
Sbjct: 1814 KAGLEIRAW 1822
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 KRNLEIQSW 9
K LEI++W
Sbjct: 1814 KAGLEIRAW 1822
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 KRNLEIQSW 9
K LEI++W
Sbjct: 1814 KAGLEIRAW 1822
>sp|PG061_VARV|PROTEIN OPG061|Variola virus
Query: 1 KRNLEIQSWR 10
++NLE +W+
Sbjct: 47 EKNLEFATWK 56
>sp|PG061_VAR67|PROTEIN OPG061|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 KRNLEIQSWR 10
++NLE +W+
Sbjct: 47 EKNLEFATWK 56
>sp|PG061_VACCP|PROTEIN OPG061|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 KRNLEIQSW 9
++NLE +W
Sbjct: 47 EKNLEFDTW 55
270|Sequence|1346|1355|IQSWRSRQRP
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 WRSRQRP 10
WR+R RP
Sbjct: 10 WRNRDRP 16
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 4 WRSRQRP 10
WR+R RP
Sbjct: 10 WRNRDRP 16
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 IQSWRSRQRP 10
+++WRS++ P
Sbjct: 2628 LKTWRSKKTP 2637
>sp|PG039_VACCC|INTERFERON antagonist OPG040|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IQSWRSRQ 8
I +W+S+Q
Sbjct: 6 INTWKSKQ 13
>sp|PG039_MONPV|INTERFERON antagonist OPG039|Monkeypox virus (MPXV)
Query: 1 IQSWRSRQ 8
I +W+S+Q
Sbjct: 6 INTWKSKQ 13
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 WRSRQRP 10
WR R RP
Sbjct: 1642 WRGRHRP 1648
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 WRSRQRP 10
WR R RP
Sbjct: 1642 WRGRHRP 1648
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 IQSWRSRQRP 10
++ WRS++ P
Sbjct: 2627 LKMWRSKKTP 2636
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 IQSWRSRQRP 10
++ WRS++ P
Sbjct: 2633 LKMWRSKKTP 2642
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 IQSWRSRQRP 10
++ WRS++ P
Sbjct: 2630 LKMWRSKKTP 2639
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 IQSWRSRQRP 10
++ WRS++ P
Sbjct: 2629 LKMWRSKKTP 2638
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 IQSWRSRQR 9
+++W+SR R
Sbjct: 2939 LRAWKSRAR 2947
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 IQSWRSRQRP 10
I SW QRP
Sbjct: 1074 ICSWLQIQRP 1083
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 IQSWRSRQR 9
+++W+SR R
Sbjct: 2939 LRAWKSRAR 2947
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 IQSWRSRQR 9
+++W+SR R
Sbjct: 2943 LRAWKSRAR 2951
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 IQSWRSRQR 9
+++W+SR R
Sbjct: 2939 LRAWKSRAR 2947
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 IQSWRSRQR 9
+++W+SR R
Sbjct: 2939 LRAWKSRAR 2947
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 IQSWRSRQRP 10
+ W S Q+P
Sbjct: 204 VNDWTSTQKP 213
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 IQSWRSRQRP 10
+ W S Q+P
Sbjct: 204 VNDWTSTQKP 213
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 IQSWRSRQRP 10
+ W S Q+P
Sbjct: 204 VNDWTSTQKP 213
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 IQSWRSRQRP 10
+ W S Q+P
Sbjct: 204 VNDWTSTQKP 213
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 IQSWRSRQRP 10
++ WRS++ P
Sbjct: 2633 LKMWRSKKVP 2642
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 IQSWRSRQRP 10
++ WRS++ P
Sbjct: 2632 LKMWRSKKVP 2641
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 IQSWRSRQRP 10
+ W S Q+P
Sbjct: 204 VNDWTSTQKP 213
>sp|VE6_HPV33|PROTEIN E6|Human papillomavirus 33
Query: 4 WRSRQR 9
WRSR+R
Sbjct: 140 WRSRRR 145
271|Sequence|1351|1360|SRQRPAPVPE
>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)
Query: 3 QRPAPVPE 10
QRP PVP+
Sbjct: 433 QRPGPVPD 440
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 3 QRPAPVP 9
Q+P P+P
Sbjct: 355 QKPPPLP 361
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 1 SRQRPAP 7
SR+RPAP
Sbjct: 481 SRKRPAP 487
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 1 SRQRPAP 7
SRQRP P
Sbjct: 88 SRQRPGP 94
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 1 SRQRPAP 7
SRQRP P
Sbjct: 88 SRQRPGP 94
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 SRQRPAP 7
SR+RPAP
Sbjct: 481 SRKRPAP 487
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 RPAPVP 9
RPAP+P
Sbjct: 373 RPAPIP 378
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 5 PAPVP 9
PAP+P
Sbjct: 663 PAPIP 667
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SRQRPAPVP 9
SR+R PVP
Sbjct: 782 SRRRSVPVP 790
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SRQRPAPVP 9
SR+R PVP
Sbjct: 782 SRRRSVPVP 790
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 QRPAPVP 9
Q PAP+P
Sbjct: 1764 QEPAPIP 1770
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 QRPAPVP 9
Q PAP+P
Sbjct: 1761 QEPAPIP 1767
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SRQRPAPVP 9
SR+R PVP
Sbjct: 782 SRRRSVPVP 790
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 RPAPVP 9
RPAP+P
Sbjct: 373 RPAPIP 378
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 5 PAPVP 9
PAP+P
Sbjct: 663 PAPIP 667
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 SRQRPAPV 8
SRQ P PV
Sbjct: 391 SRQSPIPV 398
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 SRQRPAPV 8
SRQ P PV
Sbjct: 391 SRQSPIPV 398
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 SRQRPAPV 8
SRQ P PV
Sbjct: 391 SRQSPIPV 398
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 SRQRPAPV 8
SRQ P PV
Sbjct: 391 SRQSPIPV 398
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 SRQRPAPV 8
SRQ P PV
Sbjct: 389 SRQSPIPV 396
>sp|BLLF2_EBVB9|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SRQRPAP 7
SRQRP+P
Sbjct: 135 SRQRPSP 141
>sp|BLLF2_EBVA8|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SRQRPAP 7
SRQRP+P
Sbjct: 135 SRQRPSP 141
>sp|BLLF2_EBVG|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SRQRPAP 7
SRQRP+P
Sbjct: 135 SRQRPSP 141
>sp|UL17_HCMVM|PROTEIN UL17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 QRPAPVPE 10
QRPA +P+
Sbjct: 54 QRPAEIPK 61
>sp|UL17_HCMVA|UNCHARACTERIZED protein UL17|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 QRPAPVPE 10
QRPA +P+
Sbjct: 54 QRPAEIPK 61
>sp|UL17_HCMVT|PROTEIN UL17|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 QRPAPVPE 10
QRPA +P+
Sbjct: 54 QRPAEIPK 61
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 SRQRPAPV 8
SRQ P PV
Sbjct: 391 SRQSPIPV 398
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 1 SRQRPAP 7
+R+RPAP
Sbjct: 96 TRRRPAP 102
272|Sequence|1356|1365|APVPEVARPT
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 APVPEVARP 9
+P+P+V+RP
Sbjct: 303 SPIPDVSRP 311
>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34
Query: 4 PEVARP 9
PE+ RP
Sbjct: 209 PEIVRP 214
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 APVPEVARPT 10
P+PE PT
Sbjct: 71 GPLPEDNEPT 80
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 APVPEVARPT 10
P+PE PT
Sbjct: 71 GPLPEDNEPT 80
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 PVPEVARPT 10
P+P+ RPT
Sbjct: 64 PIPKARRPT 72
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 APVPEVARPT 10
P+PE PT
Sbjct: 71 GPLPEDNEPT 80
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 APVPEVARPT 10
P+PE PT
Sbjct: 71 GPLPEDNEPT 80
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PVPEVARP 9
P+P+V RP
Sbjct: 64 PIPKVRRP 71
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 APVPEVARPT 10
AP PE PT
Sbjct: 418 APSPEAQTPT 427
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 APVPEVARPT 10
P+PE PT
Sbjct: 71 GPLPEDNEPT 80
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 APVPEVARP 9
+P+P V+RP
Sbjct: 301 SPLPNVSRP 309
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 APVPEV 6
+PVPE+
Sbjct: 2671 SPVPEI 2676
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 3 VPEVARPT 10
+PE +PT
Sbjct: 376 IPEAVKPT 383
273|Sequence|1361|1370|VARPTHHPVS
>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 RPTHHPVS 10
RPTH PV+
Sbjct: 185 RPTHKPVT 192
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 1 VARPTHH 7
+A+PT+H
Sbjct: 989 IAKPTNH 995
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 THHPV 9
THHPV
Sbjct: 142 THHPV 146
>sp|VE2_HPV31|REGULATORY protein E2|Human papillomavirus 31
Query: 3 RPTHHP 8
R THHP
Sbjct: 253 RNTHHP 258
>sp|FUS_MUMPM|FUSION glycoprotein F0|Mumps virus genotype B (strain
Query: 1 VARPTHHPVS 10
+ +P HH V+
Sbjct: 394 IYQPDHHAVT 403
>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain
Query: 1 VARPTHHPVS 10
+ +P HH V+
Sbjct: 394 IYQPDHHAVT 403
>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)
Query: 1 VARPTHHPVS 10
+ +P HH V+
Sbjct: 394 IYQPDHHAVT 403
>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)
Query: 1 VARPTHHPVS 10
+ +P HH V+
Sbjct: 394 IYQPDHHAVT 403
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 ARPTHHPV 9
ARP ++PV
Sbjct: 2289 ARPDYNPV 2296
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 4 PTHHP 8
PT+HP
Sbjct: 407 PTNHP 411
>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)
Query: 1 VARPTHHPVS 10
+ +P HH V+
Sbjct: 394 IYQPDHHAVT 403
>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)
Query: 1 VARPTHHPVS 10
+ +P HH V+
Sbjct: 394 IYQPDHHAVT 403
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 2 ARPTHHPVS 10
A P H PV+
Sbjct: 197 ATPAHEPVN 205
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 2 ARPTHHPVS 10
A P H PV+
Sbjct: 197 ATPAHEPVN 205
>sp|VE8E2_HPV31|PROTEIN E8^E2C|Human papillomavirus 31
Query: 3 RPTHHP 8
R THHP
Sbjct: 65 RNTHHP 70
>sp|VL2_HPV6B|MINOR capsid protein L2|Human papillomavirus type 6b
Query: 3 RPTHHPVS 10
PT HPV+
Sbjct: 358 NPTQHPVT 365
>sp|VL2_HPV6A|MINOR capsid protein L2|Human papillomavirus type 6a
Query: 3 RPTHHPVS 10
PT HPV+
Sbjct: 358 NPTQHPVT 365
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 THHPVS 10
THH VS
Sbjct: 2541 THHAVS 2546
>sp|NEC2_VZVD|NUCLEAR egress protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 RPTHHPVS 10
RPT+ PV+
Sbjct: 102 RPTNAPVA 109
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 2 ARPTHHPVS 10
A P H PV+
Sbjct: 197 ATPAHEPVN 205
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 ARPTHHPVS 10
A P H PV+
Sbjct: 197 ATPAHEPVN 205
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 ARPTHHPVS 10
A P H PV+
Sbjct: 197 ATPAHEPVN 205
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 RPTHHPVS 10
RP HH V+
Sbjct: 294 RPKHHQVT 301
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 RPTHHPV 9
R TH+PV
Sbjct: 851 RSTHNPV 857
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 VARPTHH 7
VAR HH
Sbjct: 111 VARHAHH 117
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 ARPTHHPVS 10
A P H PV+
Sbjct: 197 ATPAHEPVN 205
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 ARPTHHPVS 10
A P H PV+
Sbjct: 197 ATPAHEPVN 205
274|Sequence|1366|1375|HHPVSSITGQ
>sp|VL2_HPV04|MINOR capsid protein L2|Human papillomavirus 4
Query: 1 HHPVSSITG 9
H P+S +TG
Sbjct: 149 HDPISDVTG 157
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 HPVSSITGQ 10
H VSSITG+
Sbjct: 1108 HFVSSITGE 1116
>sp|VP6_ROTGI|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Rat/United
Query: 1 HHPVSSITG 9
H P +S+TG
Sbjct: 167 HRPNASMTG 175
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HHPVSSITGQ 10
++P++ +TGQ
Sbjct: 356 NNPITIVTGQ 365
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 HHPVSSITGQ 10
++P++ +TGQ
Sbjct: 356 NNPITIVTGQ 365
>sp|NP04_HHV2H|NUCLEAR protein UL4|Human herpesvirus 2 (strain HG52)
Query: 1 HHPVSSIT 8
HHP +S+T
Sbjct: 13 HHPRASLT 20
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 HPVSSITG 9
+P+S+ITG
Sbjct: 696 YPMSTITG 703
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 HHPVSSIT 8
H PV S+T
Sbjct: 476 HEPVGSLT 483
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 HHPVSSIT 8
H PV S+T
Sbjct: 476 HEPVGSLT 483
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 HHPVSSIT 8
H PV S+T
Sbjct: 476 HEPVGSLT 483
275|Sequence|1371|1380|SITGQDFSAS
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 SITGQDFS 8
S+TG DFS
Sbjct: 1219 SLTGPDFS 1226
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 SITGQDFSAS 10
++ GQ FSA+
Sbjct: 204 AVVGQAFSAT 213
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 SITGQDFSA 9
++TG+D+S+
Sbjct: 1206 ALTGEDWSS 1214
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 SITGQDFSA 9
++TG+D+S+
Sbjct: 1206 ALTGEDWSS 1214
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 ITGQDF 7
ITG DF
Sbjct: 137 ITGMDF 142
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 SITGQDF 7
S+TG DF
Sbjct: 1219 SLTGPDF 1225
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 SITGQDF 7
S+TG DF
Sbjct: 1219 SLTGPDF 1225
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 SITGQDF 7
S+TG DF
Sbjct: 1219 SLTGPDF 1225
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 SITGQDF 7
S+TG DF
Sbjct: 1219 SLTGPDF 1225
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 SITGQDF 7
S+TG DF
Sbjct: 1219 SLTGPDF 1225
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 SITGQDF 7
S+TG DF
Sbjct: 1219 SLTGPDF 1225
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 SITGQDF 7
S+TG DF
Sbjct: 1219 SLTGPDF 1225
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 SITGQDF 7
S+TG DF
Sbjct: 1219 SLTGPDF 1225
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 SITGQDF 7
S+TG DF
Sbjct: 1220 SLTGPDF 1226
276|Sequence|1376|1385|DFSASTPKSS
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 DFSASTPK 8
DF+ +TPK
Sbjct: 47 DFATATPK 54
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 1 DFSASTPK 8
DF+ +TPK
Sbjct: 47 DFATATPK 54
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|C_PI3H4|PROTEIN C|Human parainfluenza 3 virus (strain
Query: 2 FSASTPKSS 10
+SA TPK +
Sbjct: 32 YSAPTPKKT 40
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 2 FSASTPKSS 10
F+A+ PK S
Sbjct: 621 FAAAPPKQS 629
277|Sequence|1381|1390|TPKSSNPPKR
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 4 SSNPPKR 10
++NPP+R
Sbjct: 483 ANNPPER 489
>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 TPKSSNPP 8
TPK + PP
Sbjct: 155 TPKKTKPP 162
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 1 TPKSSNP 7
TP+SS P
Sbjct: 538 TPRSSTP 544
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 1 TPKSSNP 7
TP+SS P
Sbjct: 538 TPRSSTP 544
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 TPKSSNPP 8
TPK + PP
Sbjct: 155 TPKKTKPP 162
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 TPKSSNPP 8
TP S+NPP
Sbjct: 600 TPPSANPP 607
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 1 TPKSSNP 7
TP S+NP
Sbjct: 71 TPTSANP 77
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 TPKSSNPP 8
TP S+NPP
Sbjct: 603 TPPSANPP 610
>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PKSSNPPK 9
PK S PK
Sbjct: 194 PKESTTPK 201
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 4 SSNPPKR 10
+SNPP R
Sbjct: 1213 ASNPPIR 1219
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 4 SSNPPKR 10
+SNPP R
Sbjct: 1213 ASNPPIR 1219
>sp|PG128_MONPV|PROTEIN OPG128|Monkeypox virus (MPXV)
Query: 6 NPPKR 10
NPPKR
Sbjct: 12 NPPKR 16
>sp|PG128_VAR67|PROTEIN OPG128|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 6 NPPKR 10
NPPKR
Sbjct: 12 NPPKR 16
>sp|PG128_VACCC|PROTEIN OPG128|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 NPPKR 10
NPPKR
Sbjct: 12 NPPKR 16
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 TPKSSNPP 8
TP ++PP
Sbjct: 1121 TPSHADPP 1128
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 TPKSSNPP 8
TP ++PP
Sbjct: 1121 TPSHADPP 1128
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 2 PKSSNPPK 9
PKS NP K
Sbjct: 53 PKSDNPKK 60
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 TPKSSNPP 8
TP ++PP
Sbjct: 1121 TPSPADPP 1128
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 TPKSSNPP 8
TP ++PP
Sbjct: 1121 TPSPADPP 1128
>sp|GL_VZVO|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Oka vaccine)
Query: 1 TPKSSNPPK 9
TP S+N P+
Sbjct: 136 TPSSTNIPE 144
>sp|GL_VZVD|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 TPKSSNPPK 9
TP S+N P+
Sbjct: 135 TPSSTNIPE 143
>sp|NEC2_HHV2H|NUCLEAR egress protein 2|Human herpesvirus 2 (strain HG52)
Query: 5 SNPPKR 10
SNPP R
Sbjct: 44 SNPPSR 49
>sp|VIF_HV1M2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 TPKSSNPP 8
TPK PP
Sbjct: 156 TPKKIKPP 163
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 TPKSSNPP 8
TPK PP
Sbjct: 155 TPKKVKPP 162
278|Sequence|1386|1395|NPPKRKHVEE
>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21
Query: 3 PKRKHVEE 10
PKR+H+EE
Sbjct: 15 PKRRHLEE 22
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 2 PPKRKHVEE 10
PP R+HV +
Sbjct: 123 PPSREHVPD 131
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 2 PPKRKH 7
PPK+KH
Sbjct: 134 PPKKKH 139
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 2 PPKRKH 7
PPK+KH
Sbjct: 134 PPKKKH 139
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 2 PPKRKH 7
PPK+KH
Sbjct: 134 PPKKKH 139
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 2 PPKRKHV 8
PPKR+ V
Sbjct: 250 PPKRQRV 256
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 2 PPKRKHVEE 10
PP R H++E
Sbjct: 544 PPPRGHLDE 552
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PPKRKHVEE 10
PP R H++E
Sbjct: 544 PPPRGHLDE 552
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 2 PPKRKHVEE 10
PP R H++E
Sbjct: 544 PPPRGHLDE 552
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 PPKRKHVEE 10
PP KH E
Sbjct: 342 PPSEKHFRE 350
>sp|TAX_HTL1L|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 PPKRKHVEE 10
PP KH E
Sbjct: 341 PPSEKHFHE 349
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 PPKRKHVEE 10
PP KH E
Sbjct: 342 PPSEKHFRE 350
>sp|VHR2_YLDV|PROBABLE host range protein 2|Yaba-like disease virus (YLDV)
Query: 1 NPPKRKHV 8
NP K KH+
Sbjct: 103 NPDKYKHM 110
279|Sequence|1391|1400|KHVEESVLHE
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 4 EESVLHE 10
EE+VLHE
Sbjct: 1914 EETVLHE 1920
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 KHVEESVLHE 10
KH ESV H+
Sbjct: 1500 KHAFESVEHK 1509
280|Sequence|1396|1405|SVLHEQRCGT
>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41
Query: 1 SVLHEQRCGT 10
++LHEQR T
Sbjct: 138 NILHEQRFPT 147
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 SVLHEQRCGT 10
S+LHE + GT
Sbjct: 90 SILHEVKPGT 99
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 HEQRC 8
H+QRC
Sbjct: 1766 HDQRC 1770
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SVLHEQRCG 9
S L+EQ CG
Sbjct: 690 SNLNEQLCG 698
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 3 LHEQRC 8
LH++RC
Sbjct: 139 LHQRRC 144
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 3 LHEQRC 8
LH++RC
Sbjct: 139 LHQRRC 144
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 3 LHEQRC 8
LH++RC
Sbjct: 139 LHQRRC 144
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 3 LHEQRC 8
LH++RC
Sbjct: 139 LHQRRC 144
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 3 LHEQRC 8
LH++RC
Sbjct: 139 LHQRRC 144
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 3 LHEQRC 8
LH++RC
Sbjct: 139 LHQRRC 144
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 SVLHEQRCGT 10
+ LH RC T
Sbjct: 1400 AALHNVRCKT 1409
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 SVLHEQRCG 9
S ++EQ CG
Sbjct: 690 SNINEQLCG 698
>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United
Query: 3 LHEQRCG 9
+HE CG
Sbjct: 67 IHEHFCG 73
>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)
Query: 1 SVLHEQR 7
S+LHE R
Sbjct: 97 SILHEVR 103
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 LHEQRC 8
+HE++C
Sbjct: 1932 VHEEKC 1937
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 LHEQRC 8
+HE++C
Sbjct: 1893 VHEEKC 1898
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 1 SVLHEQR 7
S+LHE R
Sbjct: 97 SILHEVR 103
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 LHEQRC 8
+HE++C
Sbjct: 1932 VHEEKC 1937
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 LHEQRC 8
+HE++C
Sbjct: 1933 VHEEKC 1938
>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)
Query: 1 SVLHEQR 7
S+LHE R
Sbjct: 97 SILHEVR 103
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 1 SVLHEQR 7
S+LHE R
Sbjct: 97 SILHEVR 103
>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)
Query: 1 SVLHEQR 7
S+LHE R
Sbjct: 97 SILHEVR 103
>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New
Query: 1 SVLHEQR 7
S+LHE R
Sbjct: 97 SILHEVR 103
>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 SVLHEQR 7
S+LHE R
Sbjct: 97 SILHEVR 103
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 SVLHEQR 7
S+LHE R
Sbjct: 97 SILHEVR 103
>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)
Query: 1 SVLHEQR 7
S+LHE R
Sbjct: 97 SILHEVR 103
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VLHEQRCG 9
VLH CG
Sbjct: 383 VLHSFNCG 390
>sp|VE8E2_HPV51|PROTEIN E8^E2C|Human papillomavirus 51
Query: 3 LHEQRCGT 10
L +QRC T
Sbjct: 8 LWKQRCST 15
>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)
Query: 1 SVLHEQR 7
S+LHE R
Sbjct: 82 SILHEVR 88
>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South
Query: 1 SVLHEQR 7
S+LHE R
Sbjct: 97 SILHEVR 103
281|Sequence|1401|1410|QRCGTECMRD
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 3 CGTECM 8
CGT CM
Sbjct: 1323 CGTNCM 1328
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 QRCGTECM 8
RC ECM
Sbjct: 488 HRCDNECM 495
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 RCGTECMR 9
RC T+C R
Sbjct: 584 RCPTDCFR 591
>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 485 HKCNNECM 492
>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCNNECM 493
>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCNNECM 493
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 485 HKCNNECM 492
>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCNNECM 493
>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCNNECM 493
>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCNNECM 493
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCNNECM 493
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCNNECM 493
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 485 HKCNNECM 492
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCNNECM 493
>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCNNECM 493
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QRCGTECMRD 10
Q+ G E MRD
Sbjct: 280 QKPGAEHMRD 289
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QRCGTECMRD 10
Q+ G E MRD
Sbjct: 280 QKPGAEHMRD 289
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 485 HKCDNECM 492
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 488 HKCDNECM 495
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 484 HKCDNECM 491
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCDNECM 493
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCDNECM 493
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 485 HKCDNECM 492
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 477 HKCDNECM 484
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 485 HKCNDECM 492
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 485 HKCNDECM 492
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCDNECM 493
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 477 HKCDNECM 484
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 484 HKCDNECM 491
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 488 HKCDNECM 495
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 487 HKCDNECM 494
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 4 GTECMRD 10
G++C+RD
Sbjct: 1628 GSKCVRD 1634
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCDNECM 493
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 QRCGTECMR 9
Q C T+C R
Sbjct: 577 QFCPTDCFR 585
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 RCGTECMR 9
+C T+C R
Sbjct: 588 KCPTDCFR 595
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 482 HKCDNECM 489
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 RCGTECMR 9
+C T+C R
Sbjct: 581 KCPTDCFR 588
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 4 GTECMRD 10
G++C+RD
Sbjct: 1624 GSKCVRD 1630
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 488 HKCDNECM 495
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCDNECM 493
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 488 HKCDNECM 495
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 488 HKCDNECM 495
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 488 HKCDNECM 495
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 4 GTECMRD 10
G++C+RD
Sbjct: 1626 GSKCVRD 1632
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 488 HKCDNECM 495
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 488 HKCDNECM 495
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 480 HKCDNECM 487
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 477 HKCDNECM 484
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 RCGTECM 8
RC T+C+
Sbjct: 568 RCVTQCL 574
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 477 HKCDNECM 484
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 RCGTECMR 9
+C T+C R
Sbjct: 581 KCPTDCFR 588
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCDDECM 493
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCDDECM 493
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 488 HKCDDECM 495
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCDDECM 493
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 4 GTECMRD 10
G++C+RD
Sbjct: 1616 GSKCVRD 1622
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 4 GTECMRD 10
G++C+RD
Sbjct: 1625 GSKCVRD 1631
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 486 HKCDDECM 493
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 4 GTECMRD 10
GT+ MRD
Sbjct: 2334 GTQAMRD 2340
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 482 HKCDDECM 489
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 482 HKCDDECM 489
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 5 TECMRD 10
+EC+RD
Sbjct: 2052 SECVRD 2057
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 5 TECMRD 10
+EC+RD
Sbjct: 2052 SECVRD 2057
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 5 TECMRD 10
+EC+RD
Sbjct: 2052 SECVRD 2057
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 482 HKCDDECM 489
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 CGTECMR 9
C T+C R
Sbjct: 581 CPTDCFR 587
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 QRCGTECMRD 10
+R ECMR+
Sbjct: 784 RRAVRECMRE 793
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 QRCGTECMRD 10
+R ECMR+
Sbjct: 784 RRAVRECMRE 793
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 3 CGTEC 7
CGT C
Sbjct: 221 CGTTC 225
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 3 CGTEC 7
CGT C
Sbjct: 221 CGTTC 225
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 CGTECMR 9
C T+C R
Sbjct: 585 CPTDCFR 591
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 CGTECMR 9
C T+C R
Sbjct: 586 CPTDCFR 592
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 3 CGTEC 7
CG EC
Sbjct: 4 CGREC 8
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 CGTECMR 9
C T+C R
Sbjct: 585 CPTDCFR 591
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QRCGTEC 7
Q C TEC
Sbjct: 21 QMCTTEC 27
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 1 QRCGTEC 7
Q C TEC
Sbjct: 23 QMCTTEC 29
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 CGTECMR 9
C T+C R
Sbjct: 583 CPTDCFR 589
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 CGTECMR 9
C T+C R
Sbjct: 585 CPTDCFR 591
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 CGTECMR 9
C T+C R
Sbjct: 585 CPTDCFR 591
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 CGTECMR 9
C T+C R
Sbjct: 585 CPTDCFR 591
>sp|TRX1_HHV6Z|TRIPLEX capsid protein 1|Human herpesvirus 6B (strain Z29)
Query: 3 CGTECM 8
CG+ C+
Sbjct: 148 CGSSCL 153
>sp|TRX1_HHV6U|TRIPLEX capsid protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 CGTECM 8
CG+ C+
Sbjct: 148 CGSSCL 153
>sp|TRX1_HHV6H|TRIPLEX capsid protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 3 CGTECM 8
CG+ C+
Sbjct: 148 CGSSCL 153
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 CGTECMR 9
C T+C R
Sbjct: 585 CPTDCFR 591
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 CGTECMR 9
C T+C R
Sbjct: 582 CPTDCFR 588
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 123 HKCRNECM 130
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11])
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 123 HKCRNECM 130
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 CGTECMR 9
C T+C R
Sbjct: 587 CPTDCFR 593
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 CGTECMR 9
C T+C R
Sbjct: 581 CPTDCFR 587
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 123 HKCRNECM 130
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CGTECMR 9
C T+C R
Sbjct: 581 CPTDCFR 587
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CGTECMR 9
C T+C R
Sbjct: 581 CPTDCFR 587
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 CGTECMR 9
C T+C R
Sbjct: 581 CPTDCFR 587
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 CGTECMR 9
C T+C R
Sbjct: 585 CPTDCFR 591
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CGTECMR 9
C T+C R
Sbjct: 581 CPTDCFR 587
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 CGTECMR 9
C T+C R
Sbjct: 587 CPTDCFR 593
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CGTECMR 9
C T+C R
Sbjct: 581 CPTDCFR 587
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CGTECMR 9
C T+C R
Sbjct: 581 CPTDCFR 587
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 CGTECMR 9
C T+C R
Sbjct: 586 CPTDCFR 592
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CGTECMR 9
C T+C R
Sbjct: 581 CPTDCFR 587
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 CGTECMR 9
C T+C R
Sbjct: 581 CPTDCFR 587
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 123 HKCRNECM 130
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 CGTECMR 9
C T+C R
Sbjct: 581 CPTDCFR 587
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 123 HKCRNECM 130
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CGTECMR 9
C T+C R
Sbjct: 581 CPTDCFR 587
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 QRCGTECM 8
Q C EC+
Sbjct: 1820 QNCTAECI 1827
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 CGTECMR 9
C T+C R
Sbjct: 586 CPTDCFR 592
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CGTECMR 9
C T+C R
Sbjct: 581 CPTDCFR 587
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 123 HKCRNECM 130
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 123 HKCRNECM 130
>sp|E3GL_ADE35|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 35
Query: 2 RCGTEC 7
+CG EC
Sbjct: 49 KCGWEC 54
>sp|E3GL_ADE1P|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 11
Query: 2 RCGTEC 7
+CG EC
Sbjct: 49 KCGWEC 54
>sp|E3GL_ADE1A|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 11
Query: 2 RCGTEC 7
+CG EC
Sbjct: 49 KCGWEC 54
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 3 CGTECMR 9
C T+C R
Sbjct: 581 CPTDCFR 587
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 3 CGTECM 8
CGT C+
Sbjct: 264 CGTHCV 269
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 3 CGTECM 8
CGT C+
Sbjct: 264 CGTHCV 269
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 3 CGTEC 7
CGT C
Sbjct: 222 CGTVC 226
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 1 QRCGTECM 8
+C ECM
Sbjct: 123 HKCRNECM 130
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 3 CGTECMR 9
C T+C R
Sbjct: 585 CPTDCFR 591
282|Sequence|1406|1415|ECMRDDSCSG
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 CMRDDSCSG 10
C+++DSC+G
Sbjct: 147 CIKNDSCTG 155
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ECMRDDSCSG 10
+C+++DSC+G
Sbjct: 144 KCIQNDSCAG 153
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 CMRDDSCSG 10
C+R D+C+G
Sbjct: 140 CIRTDNCTG 148
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 CMRDDSCSG 10
C R D+CSG
Sbjct: 146 CARADNCSG 154
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 CMRDDSCSG 10
C+R D+C+G
Sbjct: 140 CIRTDNCTG 148
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 CMRDDSCSG 10
C+++D+C G
Sbjct: 147 CIKNDTCPG 155
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 CMRDDSCSG 10
C+R ++CSG
Sbjct: 143 CIRTNNCSG 151
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 2 CMRDDSC 8
CM+ +SC
Sbjct: 1263 CMKSNSC 1269
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CMRDDSC 8
CM+ +SC
Sbjct: 1263 CMKSNSC 1269
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 ECMRDDSCSG 10
EC + +CSG
Sbjct: 2044 ECFKRYACSG 2053
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 ECMRDD 6
EC+R+D
Sbjct: 763 ECIRED 768
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 ECMRDDSCS 9
+C+ D+SC+
Sbjct: 605 QCIADNSCA 613
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 CMRDDS 7
C+RDD+
Sbjct: 2158 CLRDDN 2163
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 CMRDDS 7
C+RDD+
Sbjct: 2178 CLRDDN 2183
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 CMRDDS 7
C+RDD+
Sbjct: 2208 CLRDDN 2213
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 CMRDDS 7
C+RDD+
Sbjct: 2158 CLRDDN 2163
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 ECMRDDS 7
EC+ DDS
Sbjct: 1011 ECIVDDS 1017
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 CMRDDS 7
C+RDD+
Sbjct: 2178 CLRDDN 2183
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 CMRDDS 7
C+RDD+
Sbjct: 2208 CLRDDN 2213
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 ECMRDDSCSG 10
EC + +C+G
Sbjct: 2095 ECFKKFACNG 2104
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 ECMRDDS 7
EC+ DDS
Sbjct: 1011 ECIVDDS 1017
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 ECMRDDSCSG 10
EC + +C+G
Sbjct: 764 ECFKKFACNG 773
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 CMRDDSCSG 10
C++ ++CSG
Sbjct: 137 CIQLNNCSG 145
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 MRDDSCSG 10
++DD C G
Sbjct: 2034 VKDDYCDG 2041
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 MRDDSCSG 10
++DD C G
Sbjct: 2034 VKDDYCDG 2041
283|Sequence|1411|1420|DSCSGDSSAQ
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 3 CSGDSSA 9
CSG+SSA
Sbjct: 655 CSGNSSA 661
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 CSGDSSA 9
CSG+SSA
Sbjct: 656 CSGNSSA 662
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 2 SCSGDSSAQ 10
+C+G+SS Q
Sbjct: 337 TCAGNSSEQ 345
>sp|VME1_CVH22|MEMBRANE protein|Human coronavirus 229E (HCoV-229E)
Query: 1 DSCSGD 6
D+C+GD
Sbjct: 4 DNCTGD 9
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 1 DSCSGDS 7
++CSGD+
Sbjct: 216 NNCSGDT 222
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 2 SCSGD 6
SCSGD
Sbjct: 139 SCSGD 143
284|Sequence|1416|1425|DSSAQLSSGE
>sp|VP7_ROTHM|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 DSSAQLSSGE 10
++S Q+S GE
Sbjct: 88 EASTQISDGE 97
>sp|UL133_HCMVM|PROTEIN UL133|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SSAQLSSG 9
SSA +SSG
Sbjct: 37 SSADVSSG 44
285|Sequence|1421|1430|LSSGEHLLGP
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 3 SGEHLLG 9
+GEHLLG
Sbjct: 2131 TGEHLLG 2137
>sp|SCP_HHV8P|SMALL capsomere-interacting protein|Human herpesvirus 8 type P
Query: 1 LSSGEHLLGP 10
LSSG H L P
Sbjct: 130 LSSGPHSLSP 139
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 SGEHLLG 9
S EHLLG
Sbjct: 207 SPEHLLG 213
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 SGEHLLG 9
S EHLLG
Sbjct: 207 SPEHLLG 213
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 3 SGEHLLG 9
S EHLLG
Sbjct: 207 SPEHLLG 213
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 SGEHLLG 9
S EHLLG
Sbjct: 207 SPEHLLG 213
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 3 SGEHLLG 9
S EHLLG
Sbjct: 207 SPEHLLG 213
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 3 SGEHLLG 9
S EHLLG
Sbjct: 207 SPEHLLG 213
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 2 SSGEHLLGP 10
+SG+ LGP
Sbjct: 254 NSGDKYLGP 262
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SSGEHLLGP 10
+SG+ LGP
Sbjct: 254 NSGDKYLGP 262
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 2 SSGEHLLGP 10
+SG+ LGP
Sbjct: 254 NSGDKYLGP 262
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 2 SSGEHLLGP 10
+SG+ LGP
Sbjct: 254 NSGDKYLGP 262
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 2 SSGEHLLGP 10
+SG+ LGP
Sbjct: 254 NSGDKYLGP 262
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 2 SSGEHLLG 9
SSG+H+ G
Sbjct: 283 SSGQHVPG 290
>sp|CAP8_ADE40|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 40
Query: 1 LSSGEHLLG 9
LS+G H++G
Sbjct: 34 LSAGPHMIG 42
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 1 LSSGEHLL 8
L SG+H L
Sbjct: 552 LESGKHFL 559
>sp|CAP8_ADE41|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 41
Query: 1 LSSGEHLLG 9
LS+G H++G
Sbjct: 34 LSAGPHMIG 42
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 LSSGEHLLGP 10
++SGE+L P
Sbjct: 535 VTSGEYLRDP 544
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 LSSGEHLLGP 10
++SGE+L P
Sbjct: 535 VTSGEYLRDP 544
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 LSSGEHLLGP 10
++SGE+L P
Sbjct: 535 VTSGEYLRDP 544
>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LSSGEHL 7
+S+GEH+
Sbjct: 175 MSNGEHV 181
>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LSSGEHL 7
+S+GEH+
Sbjct: 175 MSNGEHV 181
>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LSSGEHL 7
+S+GEH+
Sbjct: 175 MSNGEHV 181
>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)
Query: 1 LSSGEHL 7
+S+GEH+
Sbjct: 175 MSNGEHV 181
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 SGEHLLG 9
SGE LLG
Sbjct: 1097 SGEWLLG 1103
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 3 SGEHLLG 9
SGE LLG
Sbjct: 1097 SGEWLLG 1103
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 SGEHLLG 9
SGE LLG
Sbjct: 1098 SGEWLLG 1104
>sp|VCP_VACCC|COMPLEMENT control protein C3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SSGEHLLG 9
+SG HL+G
Sbjct: 113 NSGYHLIG 120
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 3 SGEHLLG 9
SGE LLG
Sbjct: 1099 SGEWLLG 1105
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 SGEHLLG 9
SGE LLG
Sbjct: 1096 SGEWLLG 1102
286|Sequence|1426|1435|HLLGPNRIMA
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 2 LLGPNRIMA 10
L GP R+M
Sbjct: 116 LFGPGRLMG 124
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 HLLGPN 6
H+LGP+
Sbjct: 602 HILGPD 607
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 HLLGPN 6
H+LGP+
Sbjct: 602 HILGPD 607
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 HLLGPN 6
H+LGP+
Sbjct: 602 HILGPD 607
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 HLLGPN 6
H+LGP+
Sbjct: 602 HILGPD 607
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 1 HLLGPN 6
H+LGP+
Sbjct: 602 HILGPD 607
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LGPNRIM 9
L PNR++
Sbjct: 355 LNPNRVL 361
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 LLGPNRI 8
L+GPN I
Sbjct: 402 LVGPNSI 408
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HLLGPNRIMA 10
HL P+ +MA
Sbjct: 20 HLFVPDTVMA 29
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 1 HLLGP 5
HL+GP
Sbjct: 222 HLIGP 226
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 1 HLLGP 5
HL+GP
Sbjct: 222 HLIGP 226
287|Sequence|1431|1440|NRIMAYSRGQ
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 MAYSRGQ 10
+AY+RGQ
Sbjct: 334 LAYARGQ 340
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 MAYSRGQ 10
+AY+RGQ
Sbjct: 334 LAYARGQ 340
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 1 NRIMAYSRG 9
NR+M+ +RG
Sbjct: 587 NRLMSINRG 595
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 1 NRIMAYSRG 9
NR+M+ +RG
Sbjct: 587 NRLMSINRG 595
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 NRIMAYSRG 9
NR+M+ +RG
Sbjct: 587 NRLMSINRG 595
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NRIMAYSRG 9
NR+M+ +RG
Sbjct: 587 NRLMSINRG 595
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 IMAYSR 8
+MAYSR
Sbjct: 92 LMAYSR 97
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 2 RIMAYSRGQ 10
R AYSRG+
Sbjct: 358 REHAYSRGR 366
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 2 RIMAYSRGQ 10
R AYSRG+
Sbjct: 358 REHAYSRGR 366
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 IMAYSR 8
+MAYSR
Sbjct: 92 LMAYSR 97
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 3 IMAYSRG 9
IM Y+RG
Sbjct: 1275 IMRYNRG 1281
>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain
Query: 1 NRIMAYS 7
NR++ YS
Sbjct: 61 NRVLGYS 67
>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain
Query: 1 NRIMAYS 7
NR++ YS
Sbjct: 60 NRVLGYS 66
288|Sequence|1436|1445|YSRGQTDMCR
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 2 SRGQTDMCR 10
SRG+ +CR
Sbjct: 791 SRGRLGLCR 799
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 2 SRGQTDMCR 10
SRG+ +CR
Sbjct: 791 SRGRLGLCR 799
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 2 SRGQTDMCR 10
SRG+ +CR
Sbjct: 791 SRGRLGLCR 799
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 2 SRGQTDMCR 10
SRG+ +CR
Sbjct: 780 SRGRLGLCR 788
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 2 SRGQTDMCR 10
SRG+ +CR
Sbjct: 790 SRGRLGLCR 798
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 2 SRGQTDMCR 10
SRG+ +CR
Sbjct: 790 SRGRLGLCR 798
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 2 SRGQTDMCR 10
SRG+ +CR
Sbjct: 790 SRGRLGVCR 798
>sp|UL121_HCMVM|MEMBRANE protein UL121|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YSRGQTDMC 9
Y RG+ ++C
Sbjct: 116 YGRGEKELC 124
>sp|UL121_HCMVA|MEMBRANE protein UL121|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YSRGQTDMC 9
Y RG+ ++C
Sbjct: 116 YGRGEKELC 124
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 RGQTDMC 9
RG DMC
Sbjct: 76 RGVPDMC 82
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain
Query: 3 RGQTDMC 9
RG DMC
Sbjct: 76 RGVPDMC 82
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 1 YSRGQTDMC 9
Y G TD C
Sbjct: 365 YDNGHTDEC 373
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 1 YSRGQTDMCR 10
Y G TD C
Sbjct: 366 YDNGHTDECE 375
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 4 GQTDMCR 10
G+T +CR
Sbjct: 2174 GETPLCR 2180
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 4 GQTDMCR 10
G+T +CR
Sbjct: 2175 GETPLCR 2181
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 4 GQTDMCR 10
G+T +CR
Sbjct: 2174 GETPLCR 2180
289|Sequence|1441|1450|TDMCRCSKRS
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 TDMCRCS 7
TD CRCS
Sbjct: 513 TDWCRCS 519
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 TDMCRCSKRS 10
T+M R S+RS
Sbjct: 1481 TEMLRSSRRS 1490
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 TDMCRCSKRS 10
T+M R S+RS
Sbjct: 1481 TEMMRSSRRS 1490
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 2 DMCRCSKR 9
++CRC +R
Sbjct: 390 NICRCLRR 397
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 3 MCRCSKR 9
+CRC KR
Sbjct: 391 ICRCLKR 397
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 1 TDMCRCS 7
T CRCS
Sbjct: 121 TSRCRCS 127
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TDMCRCS 7
T CRCS
Sbjct: 121 TSRCRCS 127
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 DMCRCSK 8
++CRC++
Sbjct: 1038 ELCRCTR 1044
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 MCRCSKR 9
MC C++R
Sbjct: 713 MCMCARR 719
>sp|M2_I97A1|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 4 CRCSKRS 10
CRCS S
Sbjct: 17 CRCSDSS 23
>sp|M2_I97A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 CRCSKRS 10
CRCS S
Sbjct: 17 CRCSDSS 23
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 3 MCRCSKR 9
MC C++R
Sbjct: 713 MCMCARR 719
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 4 CRCS 7
CRCS
Sbjct: 917 CRCS 920
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 4 CRCS 7
CRCS
Sbjct: 907 CRCS 910
>sp|M2_I03A0|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 4 CRCSKRS 10
CRCS S
Sbjct: 17 CRCSDSS 23
>sp|M2_I02A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 CRCSKRS 10
CRCS S
Sbjct: 17 CRCSDSS 23
>sp|M2_I02A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 4 CRCSKRS 10
CRCS S
Sbjct: 17 CRCSDSS 23
>sp|M2_I59A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 4 CRCSKRS 10
CRCS S
Sbjct: 17 CRCSDSS 23
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 3 MCRCSKR 9
MC C++R
Sbjct: 713 MCMCARR 719
>sp|M2_I05A1|MATRIX protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 4 CRCSKRS 10
CRCS S
Sbjct: 17 CRCSDSS 23
>sp|M2_I03A1|MATRIX protein 2|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 4 CRCSKRS 10
CRCS S
Sbjct: 17 CRCSDSS 23
>sp|M2_I02A6|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 CRCSKRS 10
CRCS S
Sbjct: 17 CRCSDSS 23
>sp|M2_I01A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 CRCSKRS 10
CRCS S
Sbjct: 20 CRCSGSS 26
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 3 MCRCSKR 9
CRC KR
Sbjct: 603 FCRCVKR 609
>sp|M2_I01A1|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 CRCSKRS 10
CRCS S
Sbjct: 17 CRCSGSS 23
>sp|M2_I02A7|MATRIX protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 4 CRCSKRS 10
CRCS S
Sbjct: 15 CRCSDSS 21
>sp|M2_I02A5|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 CRCSKRS 10
CRCS S
Sbjct: 17 CRCSGSS 23
>sp|M2_I00A0|MATRIX protein 2|Influenza A virus (strain A/Duck/Hong
Query: 4 CRCSKRS 10
CRCS S
Sbjct: 17 CRCSGSS 23
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 MCRCSKR 9
MC C++R
Sbjct: 713 MCVCARR 719
>sp|M2_I01A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 CRCSKRS 10
CRCS S
Sbjct: 17 CRCSGSS 23
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 4 CRCSK 8
CRC K
Sbjct: 467 CRCGK 471
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 1 TDMCRC 6
T+MC C
Sbjct: 367 TNMCLC 372
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 MCRCSKR 9
MC C++R
Sbjct: 712 MCICARR 718
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 4 CRCSK 8
CRC K
Sbjct: 470 CRCGK 474
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 MCRCSKR 9
MC C++R
Sbjct: 712 MCICARR 718
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 MCRCSKR 9
MC C++R
Sbjct: 712 MCICARR 718
290|Sequence|1446|1455|CSKRSSHRRS
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 CSKRSSHRRS 10
C RS HRRS
Sbjct: 326 CRNRSRHRRS 335
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 CSKRSSHRRS 10
C RS HRRS
Sbjct: 326 CRNRSRHRRS 335
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 CSKRSSHRR 9
CS+ HRR
Sbjct: 194 CSQTGEHRR 202
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 CSKRSSHRR 9
CS+ HRR
Sbjct: 194 CSQTGEHRR 202
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 CSKRSSHRR 9
CS+ HRR
Sbjct: 194 CSQTGEHRR 202
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 CSKRSSHRR 9
CS+ HRR
Sbjct: 194 CSQTGEHRR 202
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 CSKRSSHRR 9
CS+ HRR
Sbjct: 194 CSQTGEHRR 202
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 CSKRSSHRR 9
C++ HRR
Sbjct: 194 CNQAGEHRR 202
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 CSKRSSHRR 9
C++ HRR
Sbjct: 194 CNQAGEHRR 202
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 CSKRSSHRR 9
C++ HRR
Sbjct: 194 CNQAGEHRR 202
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 CSKRSSHRR 9
C++ HRR
Sbjct: 194 CNQAGEHRR 202
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 1 CSKRSSHRR 9
CS+ ++H+R
Sbjct: 107 CSQMNAHQR 115
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 4 RSSHRRS 10
RSSHRR+
Sbjct: 84 RSSHRRA 90
>sp|BILF1_EBVB9|G-PROTEIN coupled receptor BILF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 KRSSHR 8
KR+SHR
Sbjct: 132 KRTSHR 137
>sp|VL2_HPV35|MINOR capsid protein L2|Human papillomavirus 35
Query: 2 SKRSSHRRS 10
+KR+ H RS
Sbjct: 305 NKRTMHTRS 313
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 1 CSKRSSH 7
C+K +SH
Sbjct: 86 CTKNNSH 92
291|Sequence|1451|1461|SHRRSQSSLTI
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 SHRRSQSSL 9
SH+RS SSL
Sbjct: 1813 SHQRSDSSL 1821
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 HRRSQSSL 9
H RS+SSL
Sbjct: 625 HTRSESSL 632
>sp|PHOSP_HMPVC|PHOSPHOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 SHRRSQS 7
SH+RSQS
Sbjct: 31 SHKRSQS 37
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 2 HRRSQSSL 9
HR+SQS L
Sbjct: 270 HRKSQSEL 277
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 1 SHRRSQS 7
SHR SQS
Sbjct: 207 SHRESQS 213
>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SHRRSQS 7
SHR SQS
Sbjct: 221 SHRESQS 227
>sp|VL2_HPV37|MINOR capsid protein L2|Human papillomavirus 37
Query: 1 SHRRSQSSLTI 11
+ RRS +S+TI
Sbjct: 455 TSRRSTNSITI 465