AT10B_HUMAN Blast Output
Archaea
1|Sequence|1|10|MALSVDSSWH

>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 2 ALSVDSSWH 10
ALS D WH
Sbjct: 108 ALSRDKKWH 116


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ALSVDSSWH 10
A+ VD+ WH
Sbjct: 394 AIDVDAIWH 402


>sp|NADK_METST|NAD kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 VDSSWH 10
+DS WH
Sbjct: 126 IDSQWH 131


>sp|PELO_METLZ|PROTEIN pelota homolog|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 MALSVDSSWH 10
M S+D WH
Sbjct: 20 MPESIDDLWH 29


>sp|PELO_METPE|PROTEIN pelota homolog|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 SVDSSWH 10
SVD WH
Sbjct: 21 SVDDIWH 27


>sp|PELO_METTP|PROTEIN pelota homolog|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 MALSVDSSWH 10
+A S+D WH
Sbjct: 18 VAESLDDLWH 27


>sp|PELO_METB6|PROTEIN pelota homolog|Methanoregula boonei (strain DSM 21154

Query: 4 SVDSSWH 10
S+D WH
Sbjct: 21 SIDDLWH 27


>sp|METXA_METFP|HOMOSERINE O-acetyltransferase|Methanobacterium formicicum (strain DSM 3637

Query: 1 MALSVDSSW 9
+ +SVDS W
Sbjct: 310 LVISVDSDW 318




2|Sequence|6|15|DSSWHRWQWR

>sp|Y1016_METJA|UNCHARACTERIZED protein MJ1016|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WHRWQW 9
+HRW W
Sbjct: 68 YHRWSW 73


>sp|AMZA_SULAC|ARCHAEMETZINCIN acidocaldarius (strain ATCC 33909

Query: 3 SWHRWQW 9
+W RWQ+
Sbjct: 46 NWERWQY 52


>sp|RNH2_PYRAE|RIBONUCLEASE HII|Pyrobaculum aerophilum (strain ATCC 51768

Query: 6 RWQWR 10
RWQW+
Sbjct: 184 RWQWK 188


>sp|Y064_ARCFU|UNCHARACTERIZED protein AF_0064|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DSSWHRWQW 9
++++HRWQW
Sbjct: 117 ENNFHRWQW 125


>sp|TRM14_PYRFU|TRNA (guanine(6)-N2)-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 1 DSSWHRWQWR 10
DSS H+ WR
Sbjct: 185 DSSLHKRPWR 194


>sp|Y089_SULAC|MEMO1 family protein Saci_0089|Sulfolobus acidocaldarius (strain ATCC

Query: 2 SSWHRWQWR 10
S WH+ +W+
Sbjct: 97 SIWHKGKWK 105


>sp|RS10_METPE|SMALL ribosomal subunit protein uS10|Methanosphaerula palustris (strain

Query: 2 SSWHRWQWR 10
++W RWQ R
Sbjct: 59 ATWDRWQMR 67


>sp|RS10_METMJ|SMALL ribosomal subunit protein uS10|Methanoculleus marisnigri (strain

Query: 2 SSWHRWQWR 10
++W RWQ R
Sbjct: 59 ATWDRWQMR 67


>sp|RS10_METHJ|SMALL ribosomal subunit protein uS10|Methanospirillum hungatei JF-1

Query: 2 SSWHRWQWR 10
++W RWQ R
Sbjct: 59 ATWDRWQMR 67


>sp|TFE_META3|TRANSCRIPTION factor E|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DSSWHRWQWR 10
+++W+ + WR
Sbjct: 72 ETNWYSYTWR 81


>sp|RS10_METLZ|SMALL ribosomal subunit protein uS10|Methanocorpusculum labreanum

Query: 2 SSWHRWQWR 10
++W RWQ R
Sbjct: 59 ATWDRWQMR 67


>sp|Y1986_ARCFU|UNCHARACTERIZED protein AF_1986|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DSSWHRWQ 8
D WHR++
Sbjct: 10 DGEWHRYK 17


>sp|PURT_METAR|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocella arvoryzae

Query: 2 SSWHRW 7
+SWH W
Sbjct: 239 ASWHPW 244


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SSWHRWQW 9
+ W+ W W
Sbjct: 2503 NGWNSWDW 2510


>sp|AATA_PYRIL|A-TYPE ATP synthase subunit A|Pyrobaculum islandicum (strain DSM 4184

Query: 4 WHRWQWR 10
WH+W R
Sbjct: 192 WHKWPVR 198


>sp|AATA_PYRCJ|A-TYPE ATP synthase subunit A|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 WHRWQWR 10
WH+W R
Sbjct: 192 WHKWPVR 198


>sp|AATA_PYRAE|A-TYPE ATP synthase subunit A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 WHRWQWR 10
WH+W R
Sbjct: 192 WHKWPVR 198


>sp|AATA_PYRNV|A-TYPE ATP synthase subunit A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 WHRWQWR 10
WH+W R
Sbjct: 192 WHKWPVR 198


>sp|TFE_METJA|TRANSCRIPTION factor E|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DSSWHRWQW 9
D++W+ + W
Sbjct: 72 DTNWYSYTW 80


>sp|AATA_PYRAR|A-TYPE ATP synthase subunit A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 WHRWQWR 10
WH+W R
Sbjct: 192 WHKWPVR 198


>sp|RS10_METS3|SMALL ribosomal subunit protein uS10|Methanobrevibacter smithii (strain

Query: 2 SSWHRWQWR 10
+SW +W+ R
Sbjct: 59 ASWEKWELR 67


>sp|ENGB_METJA|PROBABLE GTP-binding protein EngB|Methanocaldococcus jannaschii (strain ATCC

Query: 4 WHRWQW 9
WH+W++
Sbjct: 181 WHQWKF 186


>sp|FLPA_HALMA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Haloarcula marismortui (strain

Query: 1 DSSWHRW 7
D W RW
Sbjct: 31 DGDWRRW 37


>sp|PELO_METJA|PROTEIN pelota homolog|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DSSWHRWQ 8
+ +W +WQ
Sbjct: 111 EKNWKKWQ 118


>sp|SYY_SULTO|TYROSINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SSWHRW 7
++WH W
Sbjct: 76 ATWHAW 81


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 4 WHRWQWR 10
W +WQ R
Sbjct: 103 WRKWQIR 109


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 1 DSSWHRWQWR 10
DS+W W+
Sbjct: 282 DSTWEDLPWK 291


>sp|TFE_PYRFU|TRANSCRIPTION factor E|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DSSWHRWQWR 10
++ W+ + WR
Sbjct: 73 ETGWYYYYWR 82


>sp|TF2B_SACSH|TRANSCRIPTION initiation factor IIB|Saccharolobus shibatae (strain ATCC 51178

Query: 4 WHRWQWR 10
W +WQ R
Sbjct: 100 WRKWQIR 106


>sp|PTH_PYRAE|PEPTIDYL-TRNA hydrolase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DSSWHRW--QW 9
D+ W +W QW
Sbjct: 38 DAKWRKWLDQW 48


>sp|SYY_SACS2|TYROSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SSWHRW 7
++WH W
Sbjct: 76 AAWHAW 81


>sp|RS10_METST|SMALL ribosomal subunit protein uS10|Methanosphaera stadtmanae (strain

Query: 2 SSWHRWQWR 10
++W +W+ R
Sbjct: 59 ATWEKWELR 67


>sp|RS10_PICTO|SMALL ribosomal subunit protein uS10|Picrophilus torridus (strain ATCC

Query: 3 SWHRWQWR 10
+W RW+ R
Sbjct: 61 TWDRWEMR 68


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 5 HRWQW 9
H WQW
Sbjct: 603 HVWQW 607


>sp|TFE_METVS|TRANSCRIPTION factor E|Methanococcus vannielii (strain ATCC 35089

Query: 1 DSSWHRWQWR 10
+++W+ + W+
Sbjct: 72 ETNWYTYTWK 81


>sp|TFE_METMP|TRANSCRIPTION factor E|Methanococcus maripaludis (strain DSM 14266

Query: 1 DSSWHRWQWR 10
+++W+ + W+
Sbjct: 72 ETNWYTYTWK 81


>sp|TFE_METM7|TRANSCRIPTION factor E|Methanococcus maripaludis (strain C7 /

Query: 1 DSSWHRWQWR 10
+++W+ + W+
Sbjct: 72 ETNWYTYTWK 81


>sp|TFE_METM5|TRANSCRIPTION factor E|Methanococcus maripaludis (strain C5 /

Query: 1 DSSWHRWQWR 10
+++W+ + W+
Sbjct: 72 ETNWYTYTWK 81


>sp|SYY_SACI7|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 SSWHRW 7
++WH W
Sbjct: 71 ATWHAW 76


>sp|SYY_SACI3|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 SSWHRW 7
++WH W
Sbjct: 71 ATWHAW 76


>sp|SYY_SACI2|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 SSWHRW 7
++WH W
Sbjct: 71 ATWHAW 76


>sp|SYY_SACI1|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 SSWHRW 7
++WH W
Sbjct: 71 ATWHAW 76


>sp|Y1815_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 1 DSSWHRWQW 9
D W R +W
Sbjct: 118 DEMWRRIRW 126


>sp|TF2B_SULTO|TRANSCRIPTION initiation factor IIB|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 WHRWQWR 10
W +WQ R
Sbjct: 102 WRKWQIR 108


>sp|SYY_SACI6|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 SSWHRW 7
++WH W
Sbjct: 71 ATWHAW 76


>sp|SYY_SACI4|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 SSWHRW 7
++WH W
Sbjct: 71 ATWHAW 76


>sp|TF2B_SULAC|TRANSCRIPTION initiation factor IIB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 WHRWQWR 10
W +WQ R
Sbjct: 101 WRKWQIR 107


>sp|PDXS_HYPBU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Hyperthermus butylicus (strain

Query: 1 DSSWHRWQW 9
D H W+W
Sbjct: 146 DEKAHIWKW 154


>sp|TFE_SACS2|TRANSCRIPTION factor E|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DSSWHRWQWR 10
DS W + W+
Sbjct: 72 DSGWFIYYWK 81


>sp|SYY_PYRFU|TYROSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SSWHRW 7
+ WH W
Sbjct: 73 ADWHSW 78


>sp|SYY_PYRAB|TYROSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 SSWHRW 7
+ WH W
Sbjct: 73 ADWHSW 78


>sp|TFE_SACI7|TRANSCRIPTION factor E|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DSSWHRWQWR 10
DS W + W+
Sbjct: 72 DSGWFIYYWK 81


>sp|TFE_SACI6|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DSSWHRWQWR 10
DS W + W+
Sbjct: 72 DSGWFIYYWK 81


>sp|TFE_SACI4|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DSSWHRWQWR 10
DS W + W+
Sbjct: 72 DSGWFIYYWK 81


>sp|TFE_SACI3|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 DSSWHRWQWR 10
DS W + W+
Sbjct: 72 DSGWFIYYWK 81


>sp|TFE_SACI2|TRANSCRIPTION factor E|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DSSWHRWQWR 10
DS W + W+
Sbjct: 72 DSGWFIYYWK 81


>sp|RS10_METTH|SMALL ribosomal subunit protein uS10|Methanothermobacter

Query: 2 SSWHRWQWR 10
++W +W+ R
Sbjct: 59 ATWEKWEMR 67


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 SSWHRW 7
+ WH W
Sbjct: 73 ADWHSW 78


>sp|TFE_THEPD|TRANSCRIPTION factor E|Thermofilum pendens (strain DSM 2475

Query: 4 WHRWQWR 10
W+++ WR
Sbjct: 73 WYKYYWR 79


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SSWHRW 7
+ WH W
Sbjct: 73 ADWHSW 78


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 6 RWQWR 10
+W+WR
Sbjct: 118 KWEWR 122


>sp|RNH2_PYRNV|RIBONUCLEASE HII|Pyrobaculum neutrophilum (strain DSM 2338

Query: 6 RWQWR 10
RW WR
Sbjct: 187 RWSWR 191


>sp|Y949_METTH|UPF0216 protein MTH_949|Methanothermobacter thermautotrophicus (strain

Query: 1 DSSWHRWQW 9
D + HR++W
Sbjct: 43 DGTRHRFKW 51


>sp|TFE_THEKO|TRANSCRIPTION factor E|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DSSWHRWQWR 10
++ W+ + WR
Sbjct: 72 ETGWYYYYWR 81


>sp|SYY_THESM|TYROSINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 SSWHRW 7
+ WH W
Sbjct: 73 ADWHSW 78


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SSWHRW 7
+ WH W
Sbjct: 73 ADWHSW 78


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DSSWHRWQWR 10
D SW R+Q R
Sbjct: 395 DFSWDRFQER 404


>sp|RL30_PYRNV|LARGE ribosomal subunit protein uL30|Pyrobaculum neutrophilum (strain

Query: 5 HRWQWR 10
RW WR
Sbjct: 92 QRWGWR 97


>sp|TFE_METAR|TRANSCRIPTION factor E|Methanocella arvoryzae (strain DSM 22066

Query: 1 DSSWHRWQWR 10
DS W + W+
Sbjct: 75 DSGWLTYLWK 84


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 SSWHRW 7
+ WH W
Sbjct: 73 ADWHSW 78




3|Sequence|11|20|RWQWRVRDGF

>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 RWQWRVRDG 9
+WQ RV DG
Sbjct: 190 KWQVRVEDG 198


>sp|RNH2_PYRAE|RIBONUCLEASE HII|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RWQWRVRDG 9
RWQW+ G
Sbjct: 184 RWQWKTVGG 192


>sp|MUTL_METLZ|DNA mismatch repair protein MutL|Methanocorpusculum labreanum (strain

Query: 3 QWRVRDGF 10
QW +R+G+
Sbjct: 270 QWAIREGY 277


>sp|PDXS_METKA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanopyrus kandleri (strain

Query: 4 WRVRDGF 10
WRV+ GF
Sbjct: 6 WRVKTGF 12


>sp|DPCKG_SACI6|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 QWRVRD 8
+WRVRD
Sbjct: 164 KWRVRD 169


>sp|DPCKG_SACI4|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 QWRVRD 8
+WRVRD
Sbjct: 164 KWRVRD 169


>sp|DPCKG_SACI3|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain M.16.27)

Query: 3 QWRVRD 8
+WRVRD
Sbjct: 164 KWRVRD 169


>sp|DPCKG_SACS2|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 QWRVRD 8
+WRVRD
Sbjct: 164 RWRVRD 169


>sp|DPCKG_SACI7|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 QWRVRD 8
+WRVRD
Sbjct: 163 RWRVRD 168


>sp|DPCKG_SACI2|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 QWRVRD 8
+WRVRD
Sbjct: 163 RWRVRD 168


>sp|DPCKG_SACI1|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 QWRVRD 8
+WRVRD
Sbjct: 163 RWRVRD 168


>sp|CAS1_THEKO|CRISPR-ASSOCIATED endonuclease Cas1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 QWRVRDGF 10
+W+V DGF
Sbjct: 122 RWKVADGF 129


>sp|Y1062_PYRAB|UNCHARACTERIZED protein PYRAB10620|Pyrococcus abyssi (strain GE5 /

Query: 1 RWQWRVRDGF 10
R WR DGF
Sbjct: 216 RLFWRYADGF 225


>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 WRVRDGF 10
WR DGF
Sbjct: 219 WRYSDGF 225


>sp|APGM_THEGJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus gammatolerans (strain DSM

Query: 3 QWRVRDG 9
QW+VR G
Sbjct: 240 QWKVRAG 246


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 WRVRDGF 10
WR+++GF
Sbjct: 210 WRIKNGF 216


>sp|EF2_PYRWO|ELONGATION factor 2|Pyrococcus woesei

Query: 1 RWQWRVRDG 9
+W RV DG
Sbjct: 190 KWMVRVEDG 198


>sp|EF2_PYRFU|ELONGATION factor 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RWQWRVRDG 9
+W RV DG
Sbjct: 190 KWMVRVEDG 198


>sp|AGLP_HALVD|HEXURONIC acid methyltransferase AglP|Haloferax volcanii (strain ATCC 29605

Query: 4 WRVRD 8
WR+RD
Sbjct: 45 WRIRD 49


>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WQWRVRD 8
W W V+D
Sbjct: 24 WVWEVKD 30


>sp|Y1080_METJA|UNCHARACTERIZED protein MJ1080|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WRVRDG 9
W +RDG
Sbjct: 55 WHIRDG 60


>sp|ASSY_PYRFU|ARGININOSUCCINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RWQWRVRDGF 10
+W W V +G
Sbjct: 300 KWSWLVYNGL 309


>sp|RL14_NANEQ|LARGE ribosomal subunit protein uL14|Nanoarchaeum equitans (strain

Query: 3 QWRVRDG 9
+WR RDG
Sbjct: 79 EWRRRDG 85


>sp|EF2_METST|ELONGATION factor 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 WQWRVRDG 9
WQ ++ DG
Sbjct: 191 WQVKIEDG 198


>sp|SYDND_AERPE|ASPARTATE--TRNA(ASP/ASN) ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 WQWRVRD 8
W +R+RD
Sbjct: 27 WAYRIRD 33


>sp|SYD_PYRAE|ASPARTATE--TRNA(ASP) ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 WQWRVRD 8
W W +RD
Sbjct: 26 WVWELRD 32


>sp|LIPA_NATPD|LIPOYL synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RWQWRVRD 8
R QW VRD
Sbjct: 172 RLQWPVRD 179


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RWQWR 5
+W+WR
Sbjct: 118 KWEWR 122


>sp|LIPA_HALLT|LIPOYL synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 RWQWRVRD 8
R QW VRD
Sbjct: 172 RLQWPVRD 179


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 WQWR 5
WQWR
Sbjct: 834 WQWR 837


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 3 QWRVRDGF 10
+W +R+G+
Sbjct: 215 EWAIRNGY 222




4|Sequence|16|25|VRDGFPHCPS

>sp|PUR2_METVS|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VRDGFPHCP 9
V +G+P CP
Sbjct: 345 VPNGYPICP 353


>sp|PTH_HALWD|PEPTIDYL-TRNA hydrolase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 RDGFPH 7
RDG PH
Sbjct: 68 RDGIPH 73


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 VRDGFPHC 8
++ G PHC
Sbjct: 436 LKSGIPHC 443


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 VRDGFPHC 8
++ G PHC
Sbjct: 436 LKSGIPHC 443


>sp|RS6E_ARCFU|SMALL ribosomal subunit protein eS6|Archaeoglobus fulgidus (strain ATCC

Query: 2 RDGFPHCP 9
RDGFP P
Sbjct: 58 RDGFPMRP 65


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RDGFPHC 8
RD FP+C
Sbjct: 911 RDMFPNC 917


>sp|CSG_METJA|S-LAYER protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VRDGFPHC 8
V+DG P+C
Sbjct: 46 VKDGQPNC 53


>sp|THIO_METJA|THIOREDOXIN jannaschii (strain ATCC 43067

Query: 6 PHCPS 10
PHCP+
Sbjct: 15 PHCPA 19


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 6 PHCP 9
PHCP
Sbjct: 361 PHCP 364


>sp|PRIL_METKA|DNA primase large subunit PriL|Methanopyrus kandleri (strain AV19 /

Query: 1 VRDGFPHCPS 10
+R FPH P+
Sbjct: 1 MRSWFPHAPT 10


>sp|RS17_THEAC|SMALL ribosomal subunit protein uS17|Thermoplasma acidophilum (strain

Query: 6 PHCP 9
PHCP
Sbjct: 20 PHCP 23


>sp|RS17_THEVO|SMALL ribosomal subunit protein uS17|Thermoplasma volcanium (strain

Query: 6 PHCP 9
PHCP
Sbjct: 20 PHCP 23




5|Sequence|21|30|PHCPSETTPL

>sp|SYS_METAC|SERINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PHCPSETTPL 10
P+ PSETTP+
Sbjct: 105 PNIPSETTPV 114


>sp|SYS_METMA|SERINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PHCPSETTPL 10
P+ PSETTP+
Sbjct: 105 PNIPSETTPV 114


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PHCPSETTPL 10
P+ PS TTP+
Sbjct: 105 PNIPSSTTPV 114


>sp|LEUC1_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 1 PHCPSETTPL 10
PH P T P+
Sbjct: 275 PHLPENTVPI 284


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PHCPSETTPL 10
PH P T P+
Sbjct: 276 PHLPENTVPI 285


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 1 PHCPSETTPL 10
PHC ET P+
Sbjct: 258 PHCGVETVPV 267


>sp|Y1264_HALSA|UPF0212 protein VNG_1264C|Halobacterium salinarum (strain ATCC 700922

Query: 1 PHCPSETTP 9
PHC ++T P
Sbjct: 51 PHCGTDTEP 59


>sp|TFE_METAR|TRANSCRIPTION factor E|Methanocella arvoryzae (strain DSM 22066

Query: 3 CPSETTPL 10
CP + TPL
Sbjct: 139 CPVDETPL 146


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PHCPSETTPL 10
PHC TPL
Sbjct: 402 PHCWRCKTPL 411


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PHCPSETTPL 10
PHC TPL
Sbjct: 402 PHCWRCKTPL 411


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PHCPSETTPL 10
PHC TPL
Sbjct: 402 PHCWRCKTPL 411


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 PHCPSETTPL 10
PHC TPL
Sbjct: 402 PHCWRCKTPL 411


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PHCPSETTPL 10
PHC TPL
Sbjct: 403 PHCWRCKTPL 412


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PHCPSETTPL 10
PHC TPL
Sbjct: 403 PHCWRCKTPL 412


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PHCPSETTPL 10
PHC TPL
Sbjct: 408 PHCWRCKTPL 417


>sp|GLMS_PYRFU|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus furiosus (strain ATCC

Query: 1 PHCPSETTPL 10
P P E TP+
Sbjct: 555 PKLPEEITPI 564


>sp|RS9_META3|SMALL ribosomal subunit protein uS9|Methanococcus aeolicus (strain ATCC

Query: 1 PHCPSETT 8
PH PS++T
Sbjct: 115 PHKPSKST 122


>sp|TFE_CALMQ|TRANSCRIPTION factor E|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 CPSETTPL 10
CP + TPL
Sbjct: 145 CPLDRTPL 152


>sp|RPO2N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 3 CPSET 7
CPSET
Sbjct: 464 CPSET 468


>sp|RPO2N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 3 CPSET 7
CPSET
Sbjct: 464 CPSET 468


>sp|Y1404_METJA|UNCHARACTERIZED protein MJ1404|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HCPSETTPL 10
HC E TP
Sbjct: 79 HCVHEDTPF 87


>sp|Y1270_PYRAB|UPF0148 protein PYRAB12700|Pyrococcus abyssi (strain GE5 /

Query: 2 HCPSETTPL 10
HCP +PL
Sbjct: 25 HCPKCGSPL 33


>sp|AROC_THEKO|CHORISMATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PHCPSE 6
P+CP E
Sbjct: 173 PYCPDE 178


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 3 CPSET 7
CPSET
Sbjct: 455 CPSET 459


>sp|Y795_PYRHO|UPF0148 protein PH0795|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HCPSETTPL 10
HCP +PL
Sbjct: 25 HCPKCGSPL 33


>sp|AROC_THEGJ|CHORISMATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PHCPSE 6
P+CP E
Sbjct: 174 PYCPDE 179


>sp|RPO2N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanococcus vannielii (strain ATCC

Query: 3 CPSET 7
CPSET
Sbjct: 455 CPSET 459


>sp|Y1383_METJA|UNCHARACTERIZED protein MJ1383|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HCPSETT 8
HC ETT
Sbjct: 163 HCNKETT 169


>sp|RNH2_THEPD|RIBONUCLEASE HII|Thermofilum pendens (strain DSM 2475

Query: 3 CPSETTPL 10
CP E PL
Sbjct: 26 CPEEKVPL 33


>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 2 HCPSETTPL 10
HC S TP+
Sbjct: 205 HCTSGMTPM 213


>sp|COFG_METPE|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 CPSETTPL 10
CP E TP+
Sbjct: 204 CPKEGTPM 211


>sp|TRMY_HALMA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Haloarcula marismortui

Query: 2 HCPSETTP 9
H P ET+P
Sbjct: 96 HIPVETSP 103




6|Sequence|26|35|ETTPLLSPEK

>sp|MV3K_PICTO|MEVALONATE-3-KINASE torridus (strain ATCC 700027

Query: 2 TTPLLSPE 9
T PLL PE
Sbjct: 167 TEPLLEPE 174


>sp|NADC_METJA|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 1 ETTPLLSP 8
+T PLLSP
Sbjct: 130 KTLPLLSP 137


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ETTPLLSPEK 10
E LLSPEK
Sbjct: 654 EEVALLSPEK 663


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 1 ETTPLLSPEK 10
ET P PEK
Sbjct: 376 ETVPFTDPEK 385


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 TPLLSPEK 10
TP++ PEK
Sbjct: 67 TPVIGPEK 74


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 1 ETTPLLSPEK 10
ET P PEK
Sbjct: 376 ETVPFTDPEK 385


>sp|GCSH1_SULTO|PROBABLE glycine cleavage system H|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ETTPLLSPEK 10
E LLSPEK
Sbjct: 119 EIEKLLSPEK 128


>sp|GCSH1_SACS2|PROBABLE glycine cleavage system H|Saccharolobus solfataricus (strain ATCC

Query: 1 ETTPLLSPEK 10
E LLSPEK
Sbjct: 120 EKEKLLSPEK 129


>sp|SPT5_METJA|TRANSCRIPTION elongation factor Spt5|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ETTPLLSPEK 10
E PLL+P+K
Sbjct: 75 EIEPLLTPKK 84


>sp|COFC_METMA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PLLSPE 9
PLLSPE
Sbjct: 96 PLLSPE 101




7|Sequence|31|40|LSPEKGRQSY

>sp|DHOM_METJA|HOMOSERINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PEKGRQ 8
PEKGR+
Sbjct: 70 PEKGRE 75


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSPEKGRQSY 10
++PEKGR ++
Sbjct: 144 VAPEKGRIAF 153


>sp|SYH_NATPD|HISTIDINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PEKGRQSY 10
PE+GR +Y
Sbjct: 421 PEEGRPTY 428




8|Sequence|36|45|GRQSYNLTQQ

>sp|FILR1_METH6|METHANOGENESIS regulatory protein FilR1|Methanothrix harundinacea (strain 6Ac)

Query: 1 GRQSYNLT 8
GRQ Y LT
Sbjct: 63 GRQGYRLT 70


>sp|Y3119_METAC|UPF0228 protein MA_3119|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 QSYNLTQ 9
Q+YN+TQ
Sbjct: 94 QNYNMTQ 100




9|Sequence|41|50|NLTQQRVVFP

>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NLTQQRVVFP 10
NL+ QRVV P
Sbjct: 538 NLSFQRVVKP 547


>sp|NADA_METB6|QUINOLINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 NLTQQRVVF 9
+LT+ RV+F
Sbjct: 139 SLTEDRVIF 147




10|Sequence|46|55|RVVFPNNSIF

>sp|TRM56_HALSA|TRNA (cytidine(56)-2'-O)-methyltransferase|Halobacterium salinarum

Query: 1 RVVFPNNS 8
RV+FP+N+
Sbjct: 37 RVLFPDNA 44


>sp|TRM56_HALS3|TRNA (cytidine(56)-2'-O)-methyltransferase|Halobacterium salinarum

Query: 1 RVVFPNNS 8
RV+FP+N+
Sbjct: 37 RVLFPDNA 44


>sp|PSTB_SACS2|PHOSPHATE import ATP-binding protein PstB|Saccharolobus solfataricus

Query: 2 VVFPNNSIF 10
+ PNNSIF
Sbjct: 31 IKIPNNSIF 39


>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 1 RVVFPNNSI 9
R FPNN++
Sbjct: 77 REFFPNNAV 85


>sp|WTPC_THEKO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Thermococcus kodakarensis (strain

Query: 3 VFPNNSIF 10
+FPN S+F
Sbjct: 84 LFPNMSVF 91


>sp|GGR3_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 3|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 RVVFPNNS 8
R+V PNN+
Sbjct: 75 RIVSPNNT 82


>sp|WTPC_PYRFU|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus furiosus (strain ATCC

Query: 3 VFPNNSIF 10
+FPN S+F
Sbjct: 83 LFPNMSVF 90


>sp|YC8C_METJA|UNCHARACTERIZED protein MJ1288.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RVVFPNNS 8
+V+F NNS
Sbjct: 71 KVIFENNS 78


>sp|YPZ4_METTF|UNCHARACTERIZED protein ORF4'|Methanothermobacter thermautotrophicus

Query: 4 FPNNSIF 10
+PN SIF
Sbjct: 183 YPNGSIF 189


>sp|YPV4_METTF|UNCHARACTERIZED protein ORF4|Methanothermobacter thermautotrophicus

Query: 4 FPNNSIF 10
+PN SIF
Sbjct: 186 YPNGSIF 192




11|Sequence|51|60|NNSIFHQDWE

>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 NSIFHQDWE 10
+S+ H++WE
Sbjct: 604 DSVIHEEWE 612


>sp|RBL_METJA|RIBULOSE bisphosphate carboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NSIFHQDW 9
N F+QDW
Sbjct: 335 NKFFNQDW 342


>sp|Y009_METJA|UNCHARACTERIZED protein MJ0009|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NNSIFHQDWE 10
N +IF+++WE
Sbjct: 78 NINIFYKNWE 87


>sp|Y1575_ARCFU|UNCHARACTERIZED protein AF_1575|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 IFHQDW 9
+FH DW
Sbjct: 175 VFHTDW 180


>sp|LIVG_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 2 NSIFHQDW 9
NS+F++ W
Sbjct: 116 NSLFYKKW 123


>sp|Y1429_THEAC|UPF0159 protein Ta1429|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 SIFHQDWE 10
S+FH+++E
Sbjct: 21 SVFHREFE 28


>sp|HYD1B_PYRFU|SULFHYDROGENASE 1 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 5 FHQDW 9
+H+DW
Sbjct: 206 YHEDW 210


>sp|PRIL_THEVO|DNA primase large subunit PriL|Thermoplasma volcanium (strain ATCC

Query: 1 NNSIFHQDW 9
++ + HQDW
Sbjct: 303 DDKLCHQDW 311




12|Sequence|56|65|HQDWEEVSRR

>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QDWEEVSRR 10
+DWEEV RR
Sbjct: 1012 KDWEEVKRR 1020


>sp|SURE_PYRAR|5'-NUCLEOTIDASE SurE|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 QDWEEV 7
QDWEEV
Sbjct: 130 QDWEEV 135


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DWEEVSRR 10
DW+EV+ R
Sbjct: 434 DWDEVAER 441


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QDWEEVSR 9
+DWEE+ R
Sbjct: 58 KDWEELYR 65


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HQDWEEVSRR 10
H D+EE RR
Sbjct: 451 HPDYEERGRR 460


>sp|Y2343_ARCFU|UNCHARACTERIZED protein AF_2343|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HQDWEEVSR 9
H DW+E+ R
Sbjct: 53 HVDWDELKR 61


>sp|PSTB2_HALMA|PHOSPHATE import ATP-binding protein PstB|Haloarcula marismortui (strain ATCC

Query: 4 WEEVSRR 10
WEEVS R
Sbjct: 195 WEEVSDR 201


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QDWEEVSRR 10
++WEE+ +R
Sbjct: 272 KEWEEMVKR 280


>sp|GATE_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 3 DWEEVSRR 10
DWEE+ R
Sbjct: 7 DWEEIGLR 14




13|Sequence|61|70|EVSRRYPGNR

>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 EVSRRYPG 8
EVSR YPG
Sbjct: 290 EVSRAYPG 297


>sp|SFSA_SULAC|SUGAR fermentation stimulation protein homolog|Sulfolobus

Query: 6 YPGNR 10
YPGNR
Sbjct: 50 YPGNR 54


>sp|SFSA_METBU|SUGAR fermentation stimulation protein homolog|Methanococcoides

Query: 6 YPGNR 10
YPGNR
Sbjct: 57 YPGNR 61


>sp|RPO3_NATPD|DNA-DIRECTED RNA polymerase subunit Rpo3|Natronomonas pharaonis (strain ATCC

Query: 1 EVSRRYPG 8
++S+RYPG
Sbjct: 192 DLSQRYPG 199


>sp|Y954_METJA|UNCHARACTERIZED protein MJ0954|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VSRRYPGN 9
+S YPGN
Sbjct: 375 ISTNYPGN 382


>sp|Y1092_METJA|PUTATIVE nickel/cobalt efflux system MJ1092|Methanocaldococcus jannaschii

Query: 1 EVSRRYPGNR 10
E+ ++Y GNR
Sbjct: 174 ELIKKYVGNR 183


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 4 RRYPGNR 10
RRYPG +
Sbjct: 250 RRYPGGQ 256


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 4 RRYPGNR 10
RRYPG +
Sbjct: 250 RRYPGGQ 256


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 2 VSRRYPGNR 10
RRYPG +
Sbjct: 245 TERRYPGGQ 253


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 4 RRYPGNR 10
RRYPG +
Sbjct: 247 RRYPGGQ 253


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 3 SRRYPGNR 10
RRYPG +
Sbjct: 251 ERRYPGGQ 258


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VSRRYPG 8
+ +RYPG
Sbjct: 358 IKKRYPG 364


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 4 RRYPGNR 10
RRYPG +
Sbjct: 837 RRYPGGQ 843




14|Sequence|66|75|YPGNRTCTTK

>sp|DCDB_METS3|DCTP deaminase, dUMP-forming|Methanobrevibacter smithii (strain ATCC

Query: 1 YPGNRTC 7
YPG R C
Sbjct: 145 YPGQRVC 151


>sp|DCDB_METST|DCTP deaminase, dUMP-forming|Methanosphaera stadtmanae (strain ATCC

Query: 1 YPGNRTC 7
YPG R C
Sbjct: 145 YPGQRVC 151


>sp|Y2077_ARCFU|UNCHARACTERIZED protein AF_2077|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YPG-NRTCTTK 10
+PG R+CTTK
Sbjct: 201 HPGAGRSCTTK 211


>sp|GGGPS_STAMF|GERANYLGERANYLGLYCERYL phosphate synthase|Staphylothermus marinus (strain ATCC 43588

Query: 1 YPGNRTCTT 9
+PGN C T
Sbjct: 79 FPGNINCLT 87


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PGNRTCTTK 10
PG + CT++
Sbjct: 428 PGGKICTSE 436


>sp|URED_CENSY|UREASE accessory protein UreD|Cenarchaeum symbiosum (strain A)

Query: 1 YPGNRTC 7
YPG R C
Sbjct: 279 YPGIRKC 285


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 YPGNRTCT 8
YP N TC+
Sbjct: 63 YPCNATCS 70




15|Sequence|71|80|TCTTKYTLFT

***** No hits found ******


16|Sequence|76|85|YTLFTFLPRN

>sp|RADA_DESAM|DNA repair and recombination protein|Desulfurococcus amylolyticus

Query: 3 LFTFLPRN 10
LFTF+P+N
Sbjct: 198 LFTFVPKN 205


>sp|RADA_DESA1|DNA repair and recombination protein|Desulfurococcus amylolyticus

Query: 3 LFTFLPRN 10
LFTF+P+N
Sbjct: 198 LFTFVPKN 205




17|Sequence|81|90|FLPRNLFEQF

>sp|PCNA_THEPD|DNA polymerase sliding clamp|Thermofilum pendens (strain DSM 2475

Query: 1 FLPRNLFEQF 10
F+P NLFE++
Sbjct: 51 FIPSNLFEEY 60


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FLPRNLFEQF 10
+P+NLF++F
Sbjct: 696 LVPQNLFQEF 705


>sp|RPO3_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Archaeoglobus fulgidus (strain ATCC

Query: 3 PRNLFEQ 9
PRN+FE+
Sbjct: 184 PRNVFEK 190


>sp|PURO_METVS|IMP cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LPRNLFEQF 10
LP+NL E F
Sbjct: 44 LPKNLEEMF 52


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 LPRNLFEQ 9
+PR LF+Q
Sbjct: 718 VPRELFDQ 725


>sp|TRUD_METAC|PROBABLE tRNA pseudouridine synthase D|Methanosarcina acetivorans (strain

Query: 2 LPRNLFEQF 10
LP+NL+ F
Sbjct: 264 LPKNLYRMF 272


>sp|AMPD_METSM|ANHYDROMEVALONATE phosphate decarboxylase|Methanobrevibacter smithii

Query: 2 LPRNLFEQF 10
+PRNL+ F
Sbjct: 149 VPRNLYTYF 157


>sp|TRUD_METBF|PROBABLE tRNA pseudouridine synthase D|Methanosarcina barkeri (strain Fusaro

Query: 2 LPRNLFEQF 10
LP+NL+ F
Sbjct: 261 LPKNLYRMF 269


>sp|PCNA2_SULAC|DNA polymerase sliding clamp 2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 FLPRNLFEQF 10
F+P++ FE++
Sbjct: 50 FVPKDYFEEY 59


>sp|TRUD_METMA|PROBABLE tRNA pseudouridine synthase D|Methanosarcina mazei (strain ATCC

Query: 2 LPRNLFEQF 10
LP+NL+ F
Sbjct: 261 LPQNLYRMF 269




18|Sequence|86|95|LFEQFHRWAN

>sp|MPGS_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 LFEQFHRWAN 10
L E+F +W N
Sbjct: 278 LLERFGKWEN 287


>sp|MPGS_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LFEQFHRWAN 10
L E+F +W N
Sbjct: 278 LLERFGKWEN 287


>sp|HEM1_THEVO|GLUTAMYL-TRNA reductase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LFEQFHRWAN 10
+F QF+R+A+
Sbjct: 305 IFSQFYRFAS 314


>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LFEQFHRWAN 10
LF++F R+ N
Sbjct: 314 LFDEFERYLN 323


>sp|PELO_ARCFU|PROTEIN pelota homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 QFHRWAN 10
+FHR+AN
Sbjct: 71 EFHRFAN 77


>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 FEQFHRWA 9
E+ HRWA
Sbjct: 193 LERTHRWA 200


>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 1 LFEQFHRWAN 10
L E+F +W N
Sbjct: 441 LVEEFTKWFN 450


>sp|IXTPA_ARCFU|DITP/XTP pyrophosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FEQFHRW 8
FE+F RW
Sbjct: 169 FEEFFRW 175


>sp|HJE_SACI5|CROSSOVER junction endodeoxyribonuclease Hje|Saccharolobus islandicus

Query: 2 FEQFHRW 8
F+Q H W
Sbjct: 90 FKQIHEW 96


>sp|MPGS_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LFEQFHRWAN 10
+ E+F +W N
Sbjct: 278 ILERFGKWEN 287


>sp|HJE_SACS2|CROSSOVER junction endodeoxyribonuclease Hje|Saccharolobus solfataricus

Query: 2 FEQFHRW 8
F+Q H W
Sbjct: 90 FKQVHEW 96


>sp|PURA_THEVO|ADENYLOSUCCINATE synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LFEQFHRWAN 10
L+E+F W +
Sbjct: 376 LYEEFEGWGD 385


>sp|YH74_ARCFU|UNCHARACTERIZED protein AF_1754|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LFEQFHRWAN 10
L F+RW N
Sbjct: 72 LILSFYRWRN 81


>sp|CBP1_PYRFU|THERMOSTABLE carboxypeptidase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LFEQFHRWAN 10
L E+ HRW +
Sbjct: 460 LREKIHRWGS 469


>sp|Y064_ARCFU|UNCHARACTERIZED protein AF_0064|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 FHRW 8
FHRW
Sbjct: 120 FHRW 123




19|Sequence|91|100|HRWANLYFLF

>sp|DNLI1_KORCO|DNA ligase 1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 HRWANLYFL 9
HRW + Y+L
Sbjct: 426 HRWYSDYYL 434


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 1 HRWANLYF 8
++W NLY+
Sbjct: 481 YQWQNLYY 488


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 1 HRWANLY 7
HR ANLY
Sbjct: 449 HRLANLY 455


>sp|RADA_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 1 HRWANLY 7
HR ANLY
Sbjct: 269 HRLANLY 275


>sp|RADA_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 1 HRWANLY 7
HR ANLY
Sbjct: 273 HRLANLY 279


>sp|KPTA1_ARCFU|PROBABLE RNA 2'-phosphotransferase 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 HRWANLYFL 9
++WAN++ +
Sbjct: 74 YKWANIWLI 82


>sp|Y1214_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 3 WANLYF 8
WAN YF
Sbjct: 287 WANGYF 292


>sp|OGT_ARCFU|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RWANLYF 8
+W LYF
Sbjct: 5 KWGELYF 11


>sp|FLAB5_PYRHO|FLAGELLIN B5|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WANLYF 8
W NLY+
Sbjct: 157 WKNLYY 162


>sp|FLAB1_THEKO|FLAGELLIN B1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 WANLYF 8
W NLY+
Sbjct: 163 WKNLYY 168


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 WANLYFLF 10
W N YF F
Sbjct: 143 WENPYFTF 150


>sp|RGYRB_NANEQ|REVERSE gyrse subunit B|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 WANLY 7
WAN+Y
Sbjct: 54 WANIY 58


>sp|Y2239_ARCFU|UNCHARACTERIZED protein AF_2239|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RWANLYFLF 10
++ +LYFLF
Sbjct: 44 KYRSLYFLF 52




20|Sequence|96|105|LYFLFLVILN

>sp|PELO_PYRAR|PROTEIN pelota homolog|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LYFLFLVI 8
LYFL+L+I
Sbjct: 22 LYFLYLLI 29


>sp|PELO_THEPD|PROTEIN pelota homolog|Thermofilum pendens (strain DSM 2475

Query: 1 LYFLFLVI 8
LY+LFL++
Sbjct: 23 LYYLFLLV 30


>sp|HTPX1_METMA|PROTEASE HtpX homolog 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 FLFLVILN 10
FLF V+LN
Sbjct: 35 FLFAVVLN 42


>sp|HTPX1_METAC|PROTEASE HtpX homolog 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 FLFLVILN 10
FLF VI+N
Sbjct: 35 FLFAVIMN 42


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LYFLFLVILN 10
LYF+F +LN
Sbjct: 654 LYFVFERVLN 663


>sp|GLMD_THEKO|GLUCOSAMINE-6-PHOSPHATE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LYFLFLVILN 10
YF FL +LN
Sbjct: 145 FYFAFLQLLN 154




21|Sequence|101|110|LVILNWMPSM

>sp|THI4_HALWD|THIAMINE thiazole synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VILNWMP 8
++LNW P
Sbjct: 149 IVLNWTP 155


>sp|TRMY_METTP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanothrix

Query: 1 LVILNWM 7
+VI+NWM
Sbjct: 182 IVIVNWM 188


>sp|THI4_THEKO|THIAMINE thiazole synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VILNWMPSM 10
+++NW P M
Sbjct: 138 LVINWTPVM 146


>sp|NUCS_AERPE|ENDONUCLEASE NucS|Aeropyrum pernix (strain ATCC 700893

Query: 4 LNWMPS 9
LNW PS
Sbjct: 80 LNWQPS 85


>sp|THI4_NATPD|THIAMINE thiazole synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VILNWMP 8
+++NW P
Sbjct: 150 IVMNWTP 156


>sp|THI4_HALVD|THIAMINE thiazole synthase|Haloferax volcanii (strain ATCC 29605

Query: 2 VILNWMP 8
+++NW P
Sbjct: 149 IVMNWTP 155


>sp|THI4_HALMA|THIAMINE thiazole synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 VILNWMP 8
+++NW P
Sbjct: 153 IVMNWTP 159


>sp|THI4_PYRHO|THIAMINE thiazole synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VILNWMPSM 10
+++NW P +
Sbjct: 139 IVINWTPVL 147


>sp|THI4_PYRAB|THIAMINE thiazole synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 VILNWMPSM 10
+++NW P +
Sbjct: 139 IVINWTPVL 147


>sp|COBD_METTP|PROBABLE cobalamin biosynthesis protein CobD|Methanothrix thermoacetophila

Query: 3 ILNWMPS 9
ILNW+P+
Sbjct: 215 ILNWIPA 221


>sp|NUCS2_HALSA|ENDONUCLEASE NucS 2|Halobacterium salinarum (strain ATCC 700922

Query: 4 LNWMP 8
+NWMP
Sbjct: 72 VNWMP 76


>sp|THI4_PYRFU|THIAMINE thiazole synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VILNWMP 8
+++NW P
Sbjct: 139 IVINWTP 145


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LVILNWMP 8
LVI NW P
Sbjct: 147 LVITNWNP 154


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 VILNWMPSM 10
V++ W PS+
Sbjct: 180 VVIEWNPSV 188




22|Sequence|106|115|WMPSMEVFHR

>sp|THIM_METVS|HYDROXYETHYLTHIAZOLE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 WMPSME 6
W+PSME
Sbjct: 71 WIPSME 76


>sp|THIM_METMP|HYDROXYETHYLTHIAZOLE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 WMPSME 6
W+PSME
Sbjct: 71 WIPSME 76


>sp|THIM_METM7|HYDROXYETHYLTHIAZOLE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 WMPSME 6
W+PSME
Sbjct: 71 WIPSME 76


>sp|THIM_METM5|HYDROXYETHYLTHIAZOLE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 WMPSME 6
W+PSME
Sbjct: 71 WIPSME 76


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 4 SMEVFHR 10
++EVFHR
Sbjct: 240 NLEVFHR 246


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 3 PSMEVFHR 10
P+M+V HR
Sbjct: 46 PAMQVAHR 53


>sp|PURT_METM7|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 3 PSMEVFHR 10
P+M+V HR
Sbjct: 46 PAMQVAHR 53


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 3 PSMEVFHR 10
P+M+V HR
Sbjct: 47 PAMQVAHR 54


>sp|PURT_HALWD|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Haloquadratum walsbyi

Query: 3 PSMEVFHR 10
P+M+V HR
Sbjct: 53 PAMQVAHR 60


>sp|PURT_METM5|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 3 PSMEVFHR 10
P+M+V HR
Sbjct: 46 PAMQVAHR 53


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 3 PSMEVFHR 10
P+M+V HR
Sbjct: 52 PAMQVAHR 59


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 3 PSMEVFHR 10
P+M+V HR
Sbjct: 52 PAMQVAHR 59


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 3 PSMEVFHR 10
P+M+V HR
Sbjct: 52 PAMQVAHR 59


>sp|RL6_NATPD|LARGE ribosomal subunit protein uL6|Natronomonas pharaonis (strain ATCC

Query: 1 WMPSMEVFH 9
W SMEVF+
Sbjct: 80 WEYSMEVFY 88




23|Sequence|111|120|EVFHREITML

>sp|PDXT_HYPBU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Hyperthermus butylicus (strain

Query: 2 VFHREIT 8
VFH EIT
Sbjct: 178 VFHPEIT 184


>sp|DNPH1_THEPD|PUTATIVE 2'-deoxynucleoside 5'-phosphate N-hydrolase 1|Thermofilum pendens

Query: 1 EVFHREITML 10
EVF R+I +L
Sbjct: 53 EVFERDIRLL 62




24|Sequence|116|125|EITMLPLAIV

>sp|METE_SULAC|METHIONINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EITMLPLAIV 10
EIT+LP ++
Sbjct: 4 EITILPTTVI 13


>sp|CBIM2_METBF|PUTATIVE cobalt transport protein CbiM|Methanosarcina barkeri (strain Fusaro

Query: 2 ITMLPLAIV 10
IT +PLAIV
Sbjct: 188 ITQVPLAIV 196


>sp|PUR7_METMJ|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 ITMLPLAIV 10
+TM+PL ++
Sbjct: 84 LTMIPLEVI 92




25|Sequence|121|130|PLAIVLFVIM

***** No hits found ******


26|Sequence|126|135|LFVIMIKDGM

>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 FVIMIKDG 9
F+I++KDG
Sbjct: 158 FIIVMKDG 165


>sp|APGM1_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanothermobacter thermautotrophicus

Query: 3 VIMIKDGM 10
VIMI DGM
Sbjct: 4 VIMIIDGM 11


>sp|Y666_PYRAB|UPF0166 protein PYRAB06660|Pyrococcus abyssi (strain GE5 /

Query: 5 MIKDGM 10
MIKDGM
Sbjct: 93 MIKDGM 98


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 2 FVIMIKDG 9
F+I +KDG
Sbjct: 156 FIIELKDG 163


>sp|Y1503_PYRHO|UPF0166 protein PH1503|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 MIKDGM 10
MIKDGM
Sbjct: 93 MIKDGM 98


>sp|RL21_META3|LARGE ribosomal subunit protein eL21|Methanococcus aeolicus (strain

Query: 2 FVIMIKDG 9
F++ +KDG
Sbjct: 72 FIVEVKDG 79




27|Sequence|131|140|IKDGMEDFKR

>sp|SRP54_METJA|SIGNAL recognition particle 54 kDa|Methanocaldococcus jannaschii (strain

Query: 1 IKDGMEDFKR 10
+K+GME FK+
Sbjct: 172 VKEGMEKFKK 181


>sp|NADB_PYRFU|L-ASPARTATE oxidase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GMEDFKR 10
G+EDFKR
Sbjct: 271 GIEDFKR 277


>sp|GAD_PICTO|D-GLUCONATE/D-GALACTONATE dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 IKDGMEDFKR 10
I DGME+F +
Sbjct: 370 IYDGMEEFNK 379


>sp|ARGJ_METJA|GLUTAMATE N-acetyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KDGMEDFKR 10
KDGMED K
Sbjct: 79 KDGMEDAKE 87


>sp|PYRDB_METKA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanopyrus kandleri (strain

Query: 3 DGMEDFKR 10
DG E FKR
Sbjct: 103 DGPEGFKR 110


>sp|Y1554_METJA|UNCHARACTERIZED protein MJ1554|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKDGMEDFK 9
IK+G DFK
Sbjct: 29 IKEGSNDFK 37


>sp|RRP42_THEAC|EXOSOME complex component Rrp42|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KDGMEDFK 9
K+G EDFK
Sbjct: 172 KEGGEDFK 179


>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 1 IKDGMEDF 8
IKDG+E+
Sbjct: 720 IKDGLEEI 727




28|Sequence|136|145|EDFKRHRFDK

>sp|Y2601_AERPE|UNCHARACTERIZED protein APE_2601.1|Aeropyrum pernix (strain ATCC 700893

Query: 3 FKRHRFD 9
FKRH FD
Sbjct: 196 FKRHGFD 202


>sp|PYRDB_PYRAB|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus abyssi (strain GE5

Query: 1 EDFKRHRFD 9
E+F++ +FD
Sbjct: 81 EEFRKEKFD 89


>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EDFKRHRFDK 10
ED+ RHR ++
Sbjct: 318 EDYLRHRVEQ 327


>sp|NFI_PICTO|BIFUNCTIONAL methyltransferase/endonuclease|Picrophilus torridus (strain ATCC

Query: 2 DFKRHRFD 9
D KR+RF+
Sbjct: 93 DLKRYRFN 100


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 1 EDFKRHRFDK 10
ED+KR+ F K
Sbjct: 4 EDYKRYEFKK 13


>sp|ASSY_HALWD|ARGININOSUCCINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DFKRH 6
DFKRH
Sbjct: 292 DFKRH 296


>sp|Y1632_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 2 DFKRHRFDK 10
DFKRH+ K
Sbjct: 243 DFKRHKKSK 251


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 EDFKRHR 7
EDF++HR
Sbjct: 721 EDFEQHR 727




29|Sequence|141|150|HRFDKAINCS

>sp|RS7_NANEQ|SMALL ribosomal subunit protein uS7|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 RFDKAINCS 10
R+ KA++CS
Sbjct: 128 RYPKAVDCS 136


>sp|SYR_METAC|ARGININE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RFDKAIN 8
RFDKA++
Sbjct: 225 RFDKAVS 231


>sp|Y1428_METJA|TPR repeat-containing protein MJ1428|Methanocaldococcus jannaschii

Query: 3 FDKAINC 9
+DKA+ C
Sbjct: 30 YDKAVEC 36




30|Sequence|146|155|AINCSNIRIY

>sp|GLYA_METS3|SERINE hydroxymethyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 AINCSNIR 8
AIN SNIR
Sbjct: 317 AINVSNIR 324


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CSNIRIY 10
CSN+++Y
Sbjct: 267 CSNVKLY 273


>sp|CDC6N_HALMA|ORC1-TYPE DNA replication protein 14|Haloarcula marismortui (strain ATCC

Query: 2 INCSNIR 8
INC N+R
Sbjct: 91 INCQNLR 97


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 INCSNI 7
INCSNI
Sbjct: 115 INCSNI 120


>sp|COFH_METHJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanospirillum hungatei JF-1

Query: 2 INCSNI 7
INCSN+
Sbjct: 64 INCSNV 69


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 AINCSNIRIY 10
A+ C+NI++Y
Sbjct: 516 AVVCNNIKVY 525


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NCSNIRIY 10
NC IR+Y
Sbjct: 452 NCEVIRLY 459


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 INCSNI 7
INCSN+
Sbjct: 117 INCSNL 122


>sp|DCDB_METLZ|DCTP deaminase, dUMP-forming|Methanocorpusculum labreanum (strain ATCC

Query: 3 NCSNIRIY 10
NC +R+Y
Sbjct: 132 NCRPVRVY 139


>sp|CBIA_SULTO|COBYRINATE a,c-diamide synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 INCSNI 7
+NCSN+
Sbjct: 117 VNCSNV 122




31|Sequence|151|160|NIRIYERKEQ

>sp|GLKA_THESM|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 NIRIYERKE 9
N R+Y RKE
Sbjct: 214 NARVYMRKE 222


>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 IRIYERKE 9
I+IY++KE
Sbjct: 361 IQIYQKKE 368


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 NIRIYERK 8
N++ YERK
Sbjct: 533 NVKKYERK 540


>sp|G3P_PICTO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 NIRIYERK 8
NI+IY++K
Sbjct: 93 NIKIYKKK 100




32|Sequence|156|165|ERKEQTYVQK

>sp|NIFD_METIV|NITROGENASE molybdenum-iron protein alpha chain|Methanobacterium ivanovii

Query: 1 ERKEQTYVQ 9
ERKE TYV+
Sbjct: 14 ERKEHTYVK 22


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 1 ERKEQTYVQK 10
ERK+ Y++K
Sbjct: 14 ERKKHVYIKK 23


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ERKEQTYVQK 10
ERKE T +QK
Sbjct: 183 ERKEITMMQK 192


>sp|Y007_METJA|PUTATIVE dehydratase subunit MJ0007|Methanocaldococcus jannaschii (strain

Query: 2 RKEQTYVQK 10
RKEQ Y QK
Sbjct: 17 RKEQLYKQK 25




33|Sequence|161|170|TYVQKCWKDV

>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 2 YVQKCW 7
YV++CW
Sbjct: 180 YVRRCW 185


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 2 YVQKCW 7
YV++CW
Sbjct: 160 YVKRCW 165


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 2 YVQKCWKDV 10
YVQKC+ +
Sbjct: 162 YVQKCFSSL 170


>sp|SYR_HALSA|ARGININE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 YVQKCWKDV 10
Y Q+ W DV
Sbjct: 291 YAQEGWNDV 299


>sp|CCA_PYRFU|CCA-ADDING enzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YVQKCWKDV 10
Y K WKDV
Sbjct: 124 YDVKSWKDV 132


>sp|GATD_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanothermobacter thermautotrophicus

Query: 2 YVQKCW 7
YV+ CW
Sbjct: 396 YVKMCW 401


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 3 VQKCWKDV 10
+QK WK++
Sbjct: 545 IQKGWKEI 552


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VQKCWKDV 10
+QK WK++
Sbjct: 546 IQKGWKEI 553


>sp|HIS6_METMJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanoculleus marisnigri

Query: 4 QKCWKDV 10
Q+CW +V
Sbjct: 151 QECWYEV 157


>sp|RL18E_PYRFU|LARGE ribosomal subunit protein eL18|Pyrococcus furiosus (strain ATCC

Query: 2 YVQKCWKDV 10
Y K WKDV
Sbjct: 25 YGVKIWKDV 33


>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 2 YVQKCW 7
YV+ CW
Sbjct: 234 YVRACW 239


>sp|CCA_PYRHO|CCA-ADDING enzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YVQKCWKDV 10
Y K WKDV
Sbjct: 124 YNVKNWKDV 132


>sp|MTD_METMA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 1 TYVQKCWKDV 10
T ++ WKDV
Sbjct: 77 TAAREIWKDV 86


>sp|MTD_METAC|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 1 TYVQKCWKDV 10
T ++ WKDV
Sbjct: 77 TAAREIWKDV 86


>sp|Y631_ARCFU|UNCHARACTERIZED protein AF_0631|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 QKCWK 8
+KCWK
Sbjct: 57 EKCWK 61


>sp|Y2167_ARCFU|UNCHARACTERIZED protein AF_2167|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 KCWKDV 10
KCW D+
Sbjct: 128 KCWDDI 133


>sp|Y597_METJA|UNCHARACTERIZED protein MJ0597|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YVQKC 6
YVQKC
Sbjct: 112 YVQKC 116


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 TYVQKCWK 8
TY++ WK
Sbjct: 177 TYIESWWK 184


>sp|KAE1_PYRAE|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum aerophilum

Query: 1 TYVQKCWK 8
TY K WK
Sbjct: 206 TYALKLWK 213




34|Sequence|166|175|CWKDVRVGDF

>sp|T1S2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii

Query: 2 WKDVRVGDF 10
W+ VR+GDF
Sbjct: 25 WEVVRIGDF 33


>sp|RS17_NANEQ|SMALL ribosomal subunit protein uS17|Nanoarchaeum equitans (strain

Query: 1 CWKDVRVGDF 10
C KD++ GD+
Sbjct: 75 CLKDIKEGDY 84


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 2 WKDVRV 7
WKDVR+
Sbjct: 466 WKDVRI 471


>sp|Y090_METJA|UNCHARACTERIZED protease MJ0090|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WKDVRVGD 9
W D+++GD
Sbjct: 344 WHDLKIGD 351


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 WKDVRVG 8
W DVR+G
Sbjct: 348 WSDVRLG 354


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 3 KDVRVGDF 10
KD++VGD+
Sbjct: 421 KDLKVGDY 428


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 WKDVRVG 8
W DVR+G
Sbjct: 352 WDDVRLG 358


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 WKDVRVG 8
W DVR+G
Sbjct: 349 WDDVRLG 355


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 2 WKDVRV 7
WKDV+V
Sbjct: 483 WKDVKV 488


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WKDVRVG 8
W D+R+G
Sbjct: 348 WSDIRLG 354


>sp|CCA_PYRHO|CCA-ADDING enzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WKDVRVG 8
WKDVR
Sbjct: 129 WKDVRTA 135


>sp|CCA_PYRFU|CCA-ADDING enzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WKDVRVG 8
WKDVR
Sbjct: 129 WKDVRTA 135


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 3 KDVRVGDF 10
K VR+GDF
Sbjct: 508 KLVRIGDF 515


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WKDVRVG 8
WKDVR
Sbjct: 129 WKDVRTA 135


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WKDVRVG 8
WKD +VG
Sbjct: 237 WKDPKVG 243


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WKDVRVG 8
W DVR+G
Sbjct: 342 WDDVRLG 348


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 4 DVRVGDF 10
D+RV DF
Sbjct: 323 DIRVADF 329


>sp|RS5_METB6|SMALL ribosomal subunit protein uS5|Methanoregula boonei (strain DSM

Query: 3 KDVRVGD 9
KDV+VGD
Sbjct: 90 KDVQVGD 96


>sp|CAS5A_SACS2|CRISPR system aCascade subunit Cas5|Saccharolobus solfataricus (strain

Query: 1 CWKDVRVG 8
CW R+G
Sbjct: 137 CWSITRIG 144


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WKDVRVGD 9
+ DVRVGD
Sbjct: 242 YADVRVGD 249


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 WKDVRVG 8
W+ VR+G
Sbjct: 550 WRQVRIG 556


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 WKDVRVG 8
WKDV+ G
Sbjct: 569 WKDVKYG 575


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 3 KDVRVGDF 10
KD+ VG+F
Sbjct: 406 KDISVGEF 413


>sp|NURA_SULAC|DNA double-strand break repair nuclease|Sulfolobus acidocaldarius

Query: 3 KDVRVG 8
KDVRVG
Sbjct: 301 KDVRVG 306


>sp|Y200_METJA|UNCHARACTERIZED hydrogenase expression/formation protein

Query: 3 KDVRVGDF 10
K+V++GD+
Sbjct: 39 KEVKIGDY 46


>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 2 WKDVRVGD 9
W+D +GD
Sbjct: 39 WQDPNIGD 46


>sp|Y812_ARCFU|UNCHARACTERIZED protein AF_0812|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WKDVR 6
WKDVR
Sbjct: 267 WKDVR 271


>sp|VAPC9_PYRAE|EXONUCLEASE VapC9|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 WKDVRVG 8
WK+ R+G
Sbjct: 44 WKEARLG 50


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 KDVRVGD 9
KD++VGD
Sbjct: 522 KDLKVGD 528


>sp|ENGB_META3|PROBABLE GTP-binding protein EngB|Methanococcus aeolicus (strain ATCC

Query: 3 KDVRVG 8
KDVRVG
Sbjct: 54 KDVRVG 59


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KDVRVGD 9
KD++VGD
Sbjct: 240 KDLKVGD 246


>sp|RS17_METTH|SMALL ribosomal subunit protein uS17|Methanothermobacter

Query: 4 DVRVGD 9
DVRVGD
Sbjct: 76 DVRVGD 81




35|Sequence|171|180|RVGDFIQMKC

>sp|PYRI_METAR|ASPARTATE carbamoyltransferase regulatory chain|Methanocella arvoryzae

Query: 1 RVGDFIQMKC 10
R GD IQ++C
Sbjct: 131 RTGDDIQLRC 140


>sp|RS28_HALSA|SMALL ribosomal subunit protein eS28|Halobacterium salinarum (strain

Query: 1 RVGDFIQMK 9
RVGD IQ+K
Sbjct: 54 RVGDVIQLK 62


>sp|RS28_HALS3|SMALL ribosomal subunit protein eS28|Halobacterium salinarum (strain

Query: 1 RVGDFIQMK 9
RVGD IQ+K
Sbjct: 54 RVGDVIQLK 62


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RVGDFIQM 8
RVG F+QM
Sbjct: 423 RVGPFVQM 430


>sp|NADE_PYRAB|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 RVGDFIQMKC 10
R+ DFI+ KC
Sbjct: 12 RIIDFIREKC 21


>sp|Y356_ARCFU|UNCHARACTERIZED sugar kinase AF_0356|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RVGDFIQMKC 10
R+G+F+ KC
Sbjct: 226 RLGNFVAAKC 235


>sp|RS28_NATPD|SMALL ribosomal subunit protein eS28|Natronomonas pharaonis (strain

Query: 1 RVGDFIQMK 9
RVGD IQ++
Sbjct: 55 RVGDVIQLR 63


>sp|EPDC_METMP|MINOR structural pilin EpdC|Methanococcus maripaludis (strain DSM 14266

Query: 3 GDFIQMKC 10
GD++ +KC
Sbjct: 113 GDYVSIKC 120


>sp|T1S2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii

Query: 1 RVGDFIQ 7
R+GDFI+
Sbjct: 29 RIGDFIK 35


>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 RVGDFIQMKC 10
+VGDF ++ C
Sbjct: 40 QVGDFYELFC 49


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 RVGDFIQMKC 10
+VGDF ++ C
Sbjct: 40 QVGDFYELFC 49


>sp|MCH_METVS|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 RVGDFIQMKC 10
+V D++ KC
Sbjct: 150 KVADYVAQKC 159


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RVGDFIQMKC 10
RV +F++++C
Sbjct: 358 RVNEFLRVEC 367


>sp|RRP4_AERPE|EXOSOME complex component Rrp4|Aeropyrum pernix (strain ATCC 700893

Query: 1 RVGDFIQMK 9
+VGD+I+ K
Sbjct: 116 KVGDYIKAK 124


>sp|RS27_NATPD|SMALL ribosomal subunit protein eS27|Natronomonas pharaonis (strain

Query: 3 GDFIQMKC 10
GDFI++ C
Sbjct: 3 GDFIRVHC 10


>sp|RS27_THEAC|SMALL ribosomal subunit protein eS27|Thermoplasma acidophilum (strain

Query: 3 GDFIQMKC 10
G F+++KC
Sbjct: 14 GHFVKIKC 21




36|Sequence|176|185|IQMKCNEIVP

>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 QMKCNEIVP 10
Q+K NEI P
Sbjct: 63 QIKLNEIAP 71


>sp|TRPD_METS3|ANTHRANILATE phosphoribosyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 QMKCNEIVP 10
++KC EI P
Sbjct: 241 RLKCYEIAP 249


>sp|MANB_METJA|PHOSPHOMANNOMUTASE jannaschii (strain ATCC 43067

Query: 3 MKCNEIVP 10
++C++IVP
Sbjct: 279 LRCSKIVP 286


>sp|MPTA_METBU|GTP cyclohydrolase MptA|Methanococcoides burtonii (strain DSM 6242

Query: 2 QMKCNEIV 9
+MKC E+V
Sbjct: 126 KMKCQEVV 133


>sp|CCA_METJA|CCA-ADDING enzyme|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IQMKCNEIV 9
+Q+K NEI+
Sbjct: 27 LQLKANEII 35


>sp|TF2B_HALVA|TRANSCRIPTION initiation factor IIB|Haloarcula vallismortis (Halobacterium

Query: 1 IQMKCNEIV 9
+Q K NEI+
Sbjct: 43 VQSKANEII 51




37|Sequence|181|190|NEIVPADILL

>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 NEIVPADILL 10
+IVPADI+L
Sbjct: 142 GDIVPADIIL 151


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 NEIVPADILL 10
NEI P D+++
Sbjct: 745 NEIFPQDVII 754


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 NEIVPADILL 10
NEI P DI++
Sbjct: 739 NEIYPQDIII 748


>sp|TRUA_METMJ|TRNA pseudouridine synthase A|Methanoculleus marisnigri (strain ATCC

Query: 1 NEIVPADI 8
N ++PADI
Sbjct: 80 NRVLPADI 87


>sp|Y1349_METJA|UNCHARACTERIZED protein MJ1349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IVPADIL 9
IVPADI+
Sbjct: 54 IVPADIV 60


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NEIVPADIL 9
N+I P+DIL
Sbjct: 241 NDIKPSDIL 249


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 NEIVPADILL 10
NE+ P D+++
Sbjct: 740 NELFPQDVII 749


>sp|HFLX_THEKO|GTPASE HflX|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EIVPADILL 10
EIV ADI+L
Sbjct: 260 EIVKADIVL 268


>sp|RSMA_METBU|PROBABLE ribosomal RNA small subunit|Methanococcoides burtonii (strain DSM

Query: 2 EIVPADIL 9
EI+P D+L
Sbjct: 87 EIIPGDVL 94


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NEIVPADIL 9
+ +VPAD+L
Sbjct: 188 DALVPADVL 196


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NEIVPADILL 10
NEIVP I L
Sbjct: 41 NEIVPGHIHL 50


>sp|Y3021_SACS2|UNCHARACTERIZED protein SSO3021|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NEIVPADILL 10
N + P+DILL
Sbjct: 359 NVVNPSDILL 368


>sp|COFC_METIM|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocaldococcus infernus (strain DSM 11812

Query: 3 IVPADILL 10
IVPADI L
Sbjct: 91 IVPADIPL 98


>sp|RS19E_SACS2|SMALL ribosomal subunit protein eS19|Saccharolobus solfataricus (strain

Query: 2 EIVPADILL 10
E+VP D+L+
Sbjct: 9 EMVPPDLLI 17




38|Sequence|186|195|ADILLLFSSD

>sp|Y575_METJA|UNCHARACTERIZED protein MJ0575|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ADILLLFS 8
ADILLL++
Sbjct: 59 ADILLLYT 66


>sp|ARLY_METPE|ARGININOSUCCINATE lyase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 DILLLFSSD 10
D+LL FS+D
Sbjct: 63 DVLLRFSAD 71




39|Sequence|191|200|LFSSDPNGIC

>sp|PSA2_HALVD|PROTEASOME subunit alpha 2|Haloferax volcanii (strain ATCC 29605

Query: 1 LFSSDPNG 8
LF++DP+G
Sbjct: 149 LFATDPSG 156


>sp|TDXH_STAMF|PEROXIREDOXIN marinus (strain ATCC 43588

Query: 1 LFSSDPNGI 9
+F DPNGI
Sbjct: 126 VFVIDPNGI 134


>sp|Y008_METJA|UNCHARACTERIZED protein MJ0008|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FSSDPNGI 9
FSS+PN I
Sbjct: 116 FSSNPNNI 123


>sp|PYRH_NATPD|URIDYLATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LFSSDPN 7
+FS+DPN
Sbjct: 145 VFSADPN 151


>sp|PYRH_HALSA|URIDYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LFSSDPN 7
+FS+DPN
Sbjct: 145 VFSADPN 151


>sp|PYRH_HALS3|URIDYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LFSSDPN 7
+FS+DPN
Sbjct: 145 VFSADPN 151


>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LFSSDPNGI 9
LF+ DPN I
Sbjct: 413 LFTKDPNII 421


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 5 DPNGIC 10
DPN IC
Sbjct: 1202 DPNDIC 1207


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LFSSDPNG 8
LF++DP G
Sbjct: 851 LFNADPEG 858


>sp|IF2A_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 1 LFSSDPNGI 9
L SSDP GI
Sbjct: 185 LRSSDPAGI 193


>sp|PYRH_METAC|URIDYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LFSSDPN 7
++SSDPN
Sbjct: 144 VYSSDPN 150


>sp|PYRH_METBF|URIDYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LFSSDPN 7
++SSDPN
Sbjct: 144 VYSSDPN 150


>sp|PYRH_METMA|URIDYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LFSSDPN 7
++SSDPN
Sbjct: 144 VYSSDPN 150


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 3 SSDPNGIC 10
+ PNG+C
Sbjct: 10 TDSPNGMC 17


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 3 SSDPNGIC 10
+ PNG+C
Sbjct: 10 TDSPNGMC 17


>sp|HEM1_METTH|GLUTAMYL-TRNA reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 SSDPNGI 9
SSDP G+
Sbjct: 351 SSDPEGV 357




40|Sequence|196|205|PNGICHLETA

>sp|HTPX2_SULAC|PROTEASE HtpX homolog 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PNGICHLETA 10
PNG +L+TA
Sbjct: 223 PNGASNLQTA 232


>sp|NRPR1_METMA|GLOBAL nitrogen regulator NrpRI|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NGICHLE 8
NGIC LE
Sbjct: 294 NGICALE 300


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 NGICHL 7
NG CHL
Sbjct: 16 NGFCHL 21


>sp|PYRC_METTH|DIHYDROOROTASE thermautotrophicus (strain ATCC 29096

Query: 1 PNGICHLET 9
P ICHL T
Sbjct: 218 PVHICHLST 226


>sp|PYRC_PYRAE|DIHYDROOROTASE aerophilum (strain ATCC 51768

Query: 1 PNGICHLETA 10
P GIC L+ A
Sbjct: 279 PPGICSLDVA 288


>sp|ACAR_METS5|ACRYLOYL-COENZYME A reductase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PNGICH 6
P+G CH
Sbjct: 89 PDGTCH 94


>sp|Y1581_ARCFU|UNCHARACTERIZED protein AF_1581|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PNGICHLET 9
P+ +C LET
Sbjct: 95 PSDVCDLET 103


>sp|HTPX2_SULTO|PROTEASE HtpX homolog 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PNGICHLETA 10
PNG +L+TA
Sbjct: 234 PNGAKNLQTA 243


>sp|HTPX_THEVO|PROTEASE HtpX homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PNGICHLETA 10
PNG +L+TA
Sbjct: 229 PNGARNLQTA 238


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NGICHL 7
NG CHL
Sbjct: 14 NGPCHL 19


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 NGICHL 7
NG CHL
Sbjct: 14 NGPCHL 19


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 NGICHL 7
NG CHL
Sbjct: 16 NGPCHL 21


>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 NGICHLET 9
NGIC L +
Sbjct: 220 NGICELNS 227


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 NGICHL 7
NG CHL
Sbjct: 16 NGPCHL 21


>sp|PROA_METMA|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NGICHL 7
+GICH+
Sbjct: 228 SGICHI 233


>sp|PROA_METBF|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina barkeri (strain Fusaro /

Query: 2 NGICHL 7
+GICH+
Sbjct: 228 SGICHI 233


>sp|PROA_METAC|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 NGICHL 7
+GICH+
Sbjct: 228 SGICHI 233


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 NGICHL 7
NG CHL
Sbjct: 16 NGPCHL 21


>sp|KAE1_PYRAE|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum aerophilum

Query: 2 NGICHLETA 10
+GI H+E A
Sbjct: 108 HGIAHIEVA 116




41|Sequence|201|210|HLETASLDGE

>sp|PYRH_HALWD|URIDYLATE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HLETASLDGE 10
H+E+A LDGE
Sbjct: 209 HIESAVLDGE 218


>sp|DNLI1_THEPD|DNA ligase 1|Thermofilum pendens (strain DSM 2475

Query: 1 HLETASLDGE 10
H+E A +DGE
Sbjct: 264 HVEEAVVDGE 273


>sp|Y1627_PYRAE|PUTATIVE HTH-type transcriptional regulatory protein|Pyrobaculum aerophilum

Query: 4 TASLDGE 10
TAS+DGE
Sbjct: 121 TASIDGE 127




42|Sequence|206|215|SLDGETNLKQ

>sp|OGG1_SACS2|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus solfataricus (strain ATCC

Query: 4 GETNLKQ 10
GETN+KQ
Sbjct: 160 GETNVKQ 166


>sp|F16PA_NATPD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LDGETNLK 9
LDG +NLK
Sbjct: 88 LDGSSNLK 95


>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 3 DGETNL 8
DGETNL
Sbjct: 170 DGETNL 175


>sp|F16PA_HALWD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LDGETNLK 9
LDG +NLK
Sbjct: 110 LDGSSNLK 117




43|Sequence|211|220|TNLKQRCVVK

>sp|DGGGP_METST|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NLKQRCVV 9
+LKQRC +
Sbjct: 118 DLKQRCFI 125




44|Sequence|216|225|RCVVKGFSQQ

>sp|GUAAA_SACS2|GMP synthase [glutamine-hydrolyzing] subunit A|Saccharolobus

Query: 3 VVKGFSQQ 10
++KGFSQQ
Sbjct: 114 ILKGFSQQ 121


>sp|EF1A_PICTO|ELONGATION factor 1-alpha|Picrophilus torridus (strain ATCC 700027

Query: 3 VVKGFSQQ 10
VVKGF+ Q
Sbjct: 316 VVKGFTAQ 323




45|Sequence|221|230|GFSQQEVQFE

>sp|PRIS_METBF|DNA primase small subunit PriS|Methanosarcina barkeri (strain Fusaro /

Query: 1 GFSQQEVQF 9
GFS+QE++
Sbjct: 134 GFSEQEIEL 142


>sp|DAPB_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GFSQQEVQ 8
GFS++E+Q
Sbjct: 105 GFSEEEMQ 112


>sp|Y737_ARCFU|UNCHARACTERIZED protein AF_0737|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GFSQQEVQFE 10
GF Q+EV+ E
Sbjct: 9 GFDQKEVEVE 18


>sp|PDXT_METST|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosphaera stadtmanae

Query: 1 GFSQQEVQFE 10
GF +Q + FE
Sbjct: 110 GFGRQRMSFE 119


>sp|Y1006_METJA|UNCHARACTERIZED ATP-binding protein MJ1006|Methanocaldococcus jannaschii (strain

Query: 1 GFSQQEVQF 9
GFS++EV +
Sbjct: 236 GFSEEEVDY 244




46|Sequence|226|235|EVQFEPELFH

>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 EVQFEPEL 8
EV+FEPEL
Sbjct: 483 EVRFEPEL 490


>sp|TBP3_METAC|TATA-BOX-BINDING protein 3|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VQFEPELF 9
V++EPE+F
Sbjct: 127 VEYEPEVF 134


>sp|TBP2_METAC|TATA-BOX-BINDING protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VQFEPELF 9
V++EPE+F
Sbjct: 127 VEYEPEVF 134


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 FEPELFH 10
F PE+FH
Sbjct: 187 FNPEVFH 193


>sp|TBP3_METMA|TATA-BOX-BINDING protein 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VQFEPELF 9
V++EPE+F
Sbjct: 127 VEYEPEVF 134


>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 2 VQFEPELFH 10
VQF PE+ H
Sbjct: 161 VQFHPEVHH 169


>sp|GUAAA_SULTO|GMP synthase [glutamine-hydrolyzing] subunit A|Sulfurisphaera tokodaii

Query: 2 VQFEPELFH 10
VQF PE+ H
Sbjct: 163 VQFHPEVKH 171


>sp|Y1331_THEVO|PUTATIVE esterase TV1331|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VQFEPE 7
+QFEPE
Sbjct: 20 IQFEPE 25


>sp|GUAAA_METMP|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 2 VQFEPELFH 10
VQF PE+ H
Sbjct: 160 VQFHPEVSH 168


>sp|GUAAA_SULAC|GMP synthase [glutamine-hydrolyzing] subunit A|Sulfolobus

Query: 2 VQFEPELFH 10
VQF PE+ H
Sbjct: 163 VQFHPEVKH 171


>sp|GUAAA_METM6|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 2 VQFEPELFH 10
VQF PE+ H
Sbjct: 160 VQFHPEVSH 168


>sp|GUAAA_METM5|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 2 VQFEPELFH 10
VQF PE+ H
Sbjct: 160 VQFHPEVSH 168


>sp|HIS52_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 2 VQFEPELFH 10
VQF PE H
Sbjct: 180 VQFHPEKSH 188


>sp|GUAAA_METJA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanocaldococcus

Query: 2 VQFEPELFH 10
VQF PE+ H
Sbjct: 160 VQFHPEVAH 168


>sp|GUAAA_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit A|Archaeoglobus fulgidus

Query: 2 VQFEPELFH 10
VQ+ PE++H
Sbjct: 158 VQWHPEVYH 166


>sp|GUAAA_METM7|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 2 VQFEPELFH 10
VQF PE+ H
Sbjct: 160 VQFHPEVSH 168


>sp|RPIA_ARCFU|RIBOSE-5-PHOSPHATE isomerase A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VQFEPEL 8
V+FEP+L
Sbjct: 73 VEFEPDL 79


>sp|GUAAA_METS3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanobrevibacter

Query: 2 VQFEPELFH 10
+QF PE+ H
Sbjct: 160 IQFHPEVHH 168


>sp|AROB_PICTO|3-DEHYDROQUINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 VQFEPELFH 10
+ EPELF+
Sbjct: 175 ITIEPELFN 183


>sp|GUAAA_META3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus aeolicus

Query: 2 VQFEPELFH 10
VQF PE+ H
Sbjct: 160 VQFHPEVSH 168


>sp|GUAAA_THEKO|GMP synthase [glutamine-hydrolyzing] subunit A|Thermococcus

Query: 2 VQFEPELFH 10
VQF PE+ H
Sbjct: 162 VQFHPEVAH 170


>sp|GUAAA_METVS|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus vannielii

Query: 2 VQFEPELFH 10
VQF PE+ H
Sbjct: 160 VQFHPEVSH 168


>sp|GUAAA_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit A|Pyrococcus furiosus

Query: 2 VQFEPELFH 10
VQF PE+ H
Sbjct: 162 VQFHPEVAH 170


>sp|GUAAA_PYRAB|GMP synthase [glutamine-hydrolyzing] subunit A|Pyrococcus abyssi

Query: 2 VQFEPELFH 10
VQF PE+ H
Sbjct: 162 VQFHPEVAH 170


>sp|GUAAA_PYRHO|GMP synthase [glutamine-hydrolyzing] subunit A|Pyrococcus horikoshii

Query: 2 VQFEPELFH 10
VQF PE+ H
Sbjct: 163 VQFHPEVAH 171


>sp|GUAAA_METTH|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothermobacter

Query: 2 VQFEPELFH 10
+QF PE+ H
Sbjct: 161 IQFHPEVHH 169


>sp|GUAAA_SACS2|GMP synthase [glutamine-hydrolyzing] subunit A|Saccharolobus

Query: 2 VQFEPELFH 10
VQF PE+ H
Sbjct: 163 VQFHPEVKH 171


>sp|GUAAA_METST|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosphaera

Query: 2 VQFEPELFH 10
+QF PE+ H
Sbjct: 160 IQFHPEVQH 168


>sp|GUAAA_THEVO|GMP synthase [glutamine-hydrolyzing] subunit A|Thermoplasma volcanium

Query: 2 VQFEPELFH 10
VQF PE+ H
Sbjct: 165 VQFHPEVEH 173


>sp|GUAAA_IGNH4|GMP synthase [glutamine-hydrolyzing] subunit A|Ignicoccus hospitalis

Query: 2 VQFEPELFH 10
VQF PE+ H
Sbjct: 163 VQFHPEVQH 171




47|Sequence|231|240|PELFHNTIVC

>sp|AMASY_HALMA|APPARENT malate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PELFHNT 7
PEL HNT
Sbjct: 211 PELRHNT 217


>sp|ACEB_HALVD|MALATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 PELFHNT 7
PEL HNT
Sbjct: 210 PELRHNT 216


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PELFHNTI 8
P L HNT+
Sbjct: 611 PTLLHNTV 618


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PELFHNTI 8
P L HNT+
Sbjct: 660 PTLLHNTV 667


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 PELFHNTI 8
P L HNT+
Sbjct: 664 PTLLHNTV 671


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM

Query: 1 PELFHNTIV 9
PELF N ++
Sbjct: 41 PELFSNNLI 49


>sp|Y958_METJA|UNCHARACTERIZED protein MJ0958|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PELFHN 6
PEL+HN
Sbjct: 74 PELYHN 79


>sp|ARGJ_METJA|GLUTAMATE N-acetyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PELFHNTIVC 10
P + H T++C
Sbjct: 179 PNMLHATMLC 188


>sp|HPRT_METAR|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocella arvoryzae (strain DSM

Query: 1 PELFHNTIVC 10
PEL + I C
Sbjct: 36 PELLRDVIAC 45


>sp|MOAA_THEKO|PROBABLE GTP 3',8-cyclase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 HNTIVC 10
HNT+ C
Sbjct: 246 HNTVFC 251


>sp|MOAA_PYRHO|PROBABLE GTP 3',8-cyclase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 HNTIVC 10
HNT+ C
Sbjct: 245 HNTVFC 250


>sp|MOAA_PYRAB|PROBABLE GTP 3',8-cyclase|Pyrococcus abyssi (strain GE5 /

Query: 5 HNTIVC 10
HNT+ C
Sbjct: 245 HNTVFC 250




48|Sequence|236|245|NTIVCEKPNN

>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 4 VCEKPN 9
VCEKPN
Sbjct: 588 VCEKPN 593


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain

Query: 3 IVCEKPNN 10
I+CEKP +
Sbjct: 12 IICEKPKS 19


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 4 VCEKPNN 10
+CE PNN
Sbjct: 360 LCEAPNN 366


>sp|Y450_METJA|UNCHARACTERIZED protein MJ0450|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IVCEKPNN 10
+VCE+PN+
Sbjct: 40 VVCERPNH 47


>sp|GFO6_HALMA|D-XYLOSE 1-dehydrogenase [NADP(+)]|Haloarcula marismortui (strain ATCC 43049

Query: 3 IVCEKP 8
I+CEKP
Sbjct: 117 ILCEKP 122


>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 NTIVCEKPN 9
N +VC KP+
Sbjct: 462 NCVVCGKPS 470


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IVCEKPN 9
I+CEKP+
Sbjct: 9 IICEKPS 15


>sp|PHOU1_METTH|PHOSPHATE-SPECIFIC transport system accessory protein|Methanothermobacter

Query: 3 IVCEKP 8
I CEKP
Sbjct: 214 ITCEKP 219


>sp|XDH2_HALVD|D-XYLOSE 1-dehydrogenase (NADP(+)) 2|Haloferax volcanii (strain ATCC 29605

Query: 3 IVCEKP 8
++CEKP
Sbjct: 89 VLCEKP 94


>sp|XDH1_HALVD|D-XYLOSE 1-dehydrogenase [NADP(+)] 1|Haloferax volcanii (strain ATCC 29605

Query: 3 IVCEKP 8
++CEKP
Sbjct: 118 VLCEKP 123


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 IVCEKPNN 10
I+C+KP +
Sbjct: 462 IICKKPES 469


>sp|Y133_METJA|UNCHARACTERIZED protein MJ0133|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TIVCEKP 8
T++CE P
Sbjct: 251 TVICESP 257


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 NTIVCEKPNN 10
NT++ EKP +
Sbjct: 56 NTMLSEKPEH 65


>sp|AROC_METVS|CHORISMATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NTIVCEKPNN 10
N I+C K NN
Sbjct: 281 NGIICPKTNN 290


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 2 TIVCEKPNN 10
T+V + PNN
Sbjct: 81 TLVMDMPNN 89




49|Sequence|241|250|EKPNNHLNKF

>sp|TF2B_PYRWO|TRANSCRIPTION initiation factor IIB|Pyrococcus woesei

Query: 2 KPNNHLNKF 10
KP +++NKF
Sbjct: 207 KPTDYVNKF 215


>sp|TF2B_PYRHO|TRANSCRIPTION initiation factor IIB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KPNNHLNKF 10
KP +++NKF
Sbjct: 207 KPTDYVNKF 215


>sp|TF2B_PYRFU|TRANSCRIPTION initiation factor IIB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KPNNHLNKF 10
KP +++NKF
Sbjct: 207 KPTDYVNKF 215


>sp|TF2B_PYRAB|TRANSCRIPTION initiation factor IIB|Pyrococcus abyssi (strain GE5 /

Query: 2 KPNNHLNKF 10
KP +++NKF
Sbjct: 207 KPTDYVNKF 215


>sp|TF2B1_THEKO|TRANSCRIPTION initiation factor IIB 1|Thermococcus kodakarensis (strain ATCC

Query: 2 KPNNHLNKF 10
KP +++NKF
Sbjct: 207 KPTDYVNKF 215


>sp|NIKR_METBU|PUTATIVE nickel-responsive regulator|Methanococcoides burtonii (strain DSM

Query: 3 PNNHLNKF 10
P+N LNKF
Sbjct: 13 PDNLLNKF 20


>sp|SPSS_METTP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EKPNNH 6
EKP+NH
Sbjct: 307 EKPHNH 312


>sp|NFI_HALMA|ENDONUCLEASE V|Haloarcula marismortui (strain ATCC 43049

Query: 1 EKPNNHLN 8
+ PN H+N
Sbjct: 217 DSPNRHIN 224


>sp|SPSS_METVS|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EKPNNH 6
EKP NH
Sbjct: 304 EKPRNH 309


>sp|ASSTI_METJA|L-ASPARTATE semialdehyde sulfurtransferase iron-sulfur

Query: 1 EKPNNHLNKF 10
EK N+L+KF
Sbjct: 56 EKALNYLSKF 65


>sp|TRXB_METJA|PUTATIVE thioredoxin reductase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EKPNNHLNKF 10
EK NH KF
Sbjct: 62 EKFKNHAEKF 71




50|Sequence|246|255|HLNKFKGYME

>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 1 HLNKFKGYME 10
HL KF+ Y++
Sbjct: 477 HLEKFEDYLQ 486


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 1 HLNKFKGYME 10
HL KF+ Y++
Sbjct: 477 HLEKFEEYLD 486


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HLNKFKGYM 9
+LNKFK Y+
Sbjct: 308 YLNKFKDYI 316


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC

Query: 1 HLNKFKGY 8
+L KF+GY
Sbjct: 54 YLQKFRGY 61


>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 2 LNKFKGY 8
L KFKGY
Sbjct: 26 LKKFKGY 32


>sp|MFNA_PYRFU|PROBABLE L-aspartate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 FKGYME 10
F+GYME
Sbjct: 292 FEGYME 297


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 HLNKFKG 7
HL+ FKG
Sbjct: 723 HLDSFKG 729


>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LNKFKGYME 10
+NKF+G +E
Sbjct: 195 INKFRGDLE 203


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 1 HLNKFKGYME 10
++NK K Y+E
Sbjct: 659 YVNKIKAYIE 668


>sp|GATE_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina barkeri (strain Fusaro /

Query: 1 HLNKFKG 7
HL KF+G
Sbjct: 309 HLKKFEG 315


>sp|COBQ_METMA|PROBABLE cobyric acid synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LNKFKGYME 10
+NKF+G +E
Sbjct: 195 INKFRGDIE 203


>sp|Y1049_METJA|UNCHARACTERIZED protein MJ1049|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LNKFKGYM 9
LN+F+ YM
Sbjct: 116 LNEFRDYM 123


>sp|GLYA_ARCFU|SERINE hydroxymethyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HLNKFKGYM 9
HLN GY+
Sbjct: 272 HLNTLAGYV 280


>sp|COAD_PYRHO|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LNKFKGY 8
+N FKGY
Sbjct: 69 VNNFKGY 75


>sp|COBQ_METJA|PROBABLE cobyric acid synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LNKFKGYME 10
+NKF+G +E
Sbjct: 195 INKFRGNVE 203




51|Sequence|251|260|KGYMEHPDQT

>sp|FLAK_HALMA|PREFLAGELLIN peptidase|Haloarcula marismortui (strain ATCC 43049

Query: 4 MEHPDQ 9
M+HPDQ
Sbjct: 261 MDHPDQ 266


>sp|RNP4_METBF|RIBONUCLEASE P protein component 4|Methanosarcina barkeri (strain Fusaro /

Query: 3 YMEHPDQT 10
Y EHPD++
Sbjct: 32 YAEHPDRS 39


>sp|Y575_METJA|UNCHARACTERIZED protein MJ0575|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YMEHPDQT 10
Y +HPD T
Sbjct: 65 YTQHPDNT 72


>sp|NARO_HALVD|TRANSCRIPTIONAL regulator NarO|Haloferax volcanii (strain ATCC 29605

Query: 2 GYMEHPDQ 9
GY EHP +
Sbjct: 169 GYFEHPRE 176


>sp|GATE_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanocaldococcus jannaschii (strain

Query: 1 KGYMEHPDQT 10
KG+ E PD++
Sbjct: 549 KGFCEFPDKS 558


>sp|TRIN_SULTO|PUTATIVE Tricorn-like protease N-terminal subunit|Sulfurisphaera tokodaii

Query: 1 KGYMEHPD 8
KGY HPD
Sbjct: 20 KGYYLHPD 27


>sp|LEUC_PYRIL|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KGYMEHPD 8
KG M HPD
Sbjct: 379 KGRMGHPD 386


>sp|AGL12_HALVD|LOW-SALT glycan biosynthesis protein Agl12|Haloferax volcanii (strain ATCC

Query: 2 GYMEHPDQ 9
GY++HP+
Sbjct: 45 GYLDHPNH 52


>sp|DNAG_METKA|DNA primase DnaG|Methanopyrus kandleri (strain AV19 /

Query: 2 GYMEHPD 8
GY+E PD
Sbjct: 25 GYVERPD 31


>sp|PYRB_SULTO|ASPARTATE carbamoyltransferase catalytic subunit|Sulfurisphaera tokodaii

Query: 2 GYMEHPDQT 10
G EHP QT
Sbjct: 124 GKHEHPTQT 132


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 3 YMEHPD 8
YME+PD
Sbjct: 82 YMEYPD 87


>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain ATCC

Query: 4 MEHPDQ 9
M HPDQ
Sbjct: 191 MHHPDQ 196


>sp|Y1281_ARCFU|UNCHARACTERIZED protein AF_1281|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KGYMEHPDQT 10
KGY PD T
Sbjct: 44 KGYQVRPDLT 53


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 3 YMEHPD 8
YME+PD
Sbjct: 82 YMEYPD 87


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 3 YMEHPD 8
YME+PD
Sbjct: 82 YMEYPD 87


>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 3 YMEHPD 8
YME+PD
Sbjct: 82 YMEYPD 87


>sp|Y1094_HALWD|PUTATIVE heme-binding protein HQ_1094A|Haloquadratum walsbyi (strain DSM

Query: 2 GYMEHPD 8
GY E+PD
Sbjct: 117 GYFENPD 123


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KGYMEHPD 8
KG+ HPD
Sbjct: 312 KGFCLHPD 319


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KGYMEHP 7
K YM+HP
Sbjct: 585 KFYMDHP 591


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 KGYMEHP 7
K YM+HP
Sbjct: 581 KFYMDHP 587


>sp|DNAG_METST|DNA primase DnaG|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KGYMEHPD 8
KG++E PD
Sbjct: 20 KGFVEKPD 27


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 2 GYMEHPD 8
GY+++PD
Sbjct: 357 GYIQNPD 363


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KGYMEHP 7
K YM+HP
Sbjct: 585 KFYMDHP 591


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KGYMEHP 7
K Y+EHP
Sbjct: 84 KLYLEHP 90


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 4 MEHPDQ 9
+EHPDQ
Sbjct: 102 VEHPDQ 107


>sp|CSG_HALSA|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 700922

Query: 4 MEHPDQT 10
+E PDQT
Sbjct: 773 LEEPDQT 779


>sp|CSG_HALS3|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 29341

Query: 4 MEHPDQT 10
+E PDQT
Sbjct: 773 LEEPDQT 779


>sp|DPOL_PYRAY|DNA polymerase 1|Pyrococcus abyssi

Query: 1 KGYMEHP 7
K Y+EHP
Sbjct: 84 KLYLEHP 90




52|Sequence|256|265|HPDQTRTGFG

>sp|RBL_METJA|RIBULOSE bisphosphate carboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HPDQTRTG 8
HPD TR G
Sbjct: 383 HPDGTRAG 390


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 1 HPDQTRTGFG 10
HPD R G G
Sbjct: 593 HPDIMRHGLG 602


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PDQTRTGFG 10
PD+T TG G
Sbjct: 520 PDKTDTGIG 528


>sp|CHEA_HALS3|CHEMOTAXIS protein CheA|Halobacterium salinarum (strain ATCC 29341

Query: 2 PDQTRTGFG 10
PD+TR G G
Sbjct: 600 PDETRNGDG 608


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 PDQTRTGF 9
PD+TR+ F
Sbjct: 348 PDETRSAF 355


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 PDQTRTGF 9
PD+TR+ F
Sbjct: 348 PDETRSAF 355


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PDQTRTGFG 10
P Q +TG G
Sbjct: 212 PSQKKTGIG 220


>sp|DCHI_THEKO|DIACETYLCHITOBIOSE deacetylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HPDQTRTGF 9
HPD GF
Sbjct: 148 HPDHRHAGF 156


Query: 1 HPDQTRTGFG 10
HPD G G
Sbjct: 40 HPDDCAIGLG 49


>sp|METK_METS3|S-ADENOSYLMETHIONINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 HPDQTRTGFG 10
HPD G G
Sbjct: 29 HPDSISDGIG 38


>sp|PDXT_PYRCJ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum calidifontis (strain

Query: 1 HPDQTRTGF 9
HP+ T T F
Sbjct: 181 HPELTTTAF 189


>sp|PDXT_PYRAR|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum arsenaticum (strain

Query: 1 HPDQTRTGF 9
HP+ T T F
Sbjct: 184 HPELTTTAF 192


>sp|TRPG_HALSA|ANTHRANILATE synthase component 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 HPDQTRTGFG 10
HP+ TG G
Sbjct: 175 HPESVLTGVG 184




53|Sequence|261|270|RTGFGCESLL

>sp|FTR_METJA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 TGFGCESLL 10
TGFGC ++
Sbjct: 41 TGFGCSVIM 49


>sp|Y253_METJA|PUTATIVE hydrogenase maturation protease MJ0253|Methanocaldococcus

Query: 3 GFGCE 7
GFGCE
Sbjct: 20 GFGCE 24


>sp|HTPX_METTH|PROTEASE HtpX homolog|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 TGFGCESLL 10
TG GC+ LL
Sbjct: 248 TGRGCQGLL 256


>sp|RIBL_METTH|FAD synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 RTGFGCE 7
R G GCE
Sbjct: 110 RRGLGCE 116


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 3 GFGCESL 9
G GCE+L
Sbjct: 238 GMGCENL 244


>sp|Y039_METKA|UPF0273 protein MK0039|Methanopyrus kandleri (strain AV19 /

Query: 3 GFGCESLL 10
G GC S+L
Sbjct: 162 GLGCTSIL 169


>sp|SYDND_METBU|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GFGCESLL 10
G GCE L+
Sbjct: 412 GIGCERLV 419


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 3 GFGCESL 9
G GCE L
Sbjct: 238 GMGCEKL 244


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 1 RTGFGCESLL 10
+TGF C ++
Sbjct: 266 KTGFNCVEIM 275




54|Sequence|266|275|CESLLLRGCT

>sp|Y1236_ARCFU|UNCHARACTERIZED protein AF_1236|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CESLLLRGC 9
C ++LLRGC
Sbjct: 82 CIAILLRGC 90


>sp|Y1807_METBF|PROTEIN Mbar_A1807|Methanosarcina barkeri (strain Fusaro /

Query: 2 ESLLLRGC 9
ES LLRGC
Sbjct: 53 ESGLLRGC 60




55|Sequence|271|280|LRGCTIRNTE

>sp|SPSS_METTP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LRGCTIR 7
L GCT+R
Sbjct: 256 LLGCTVR 262




56|Sequence|276|285|IRNTEMAVGI

***** No hits found ******


57|Sequence|281|290|MAVGIVIYAG

>sp|TRMJ_SULAC|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Sulfolobus acidocaldarius

Query: 2 AVGIVIY 8
AVGIV+Y
Sbjct: 145 AVGIVLY 151


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GIVIYAG 10
G+V+YAG
Sbjct: 201 GMVVYAG 207


>sp|RF1_METMP|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain

Query: 1 MAVGIVIYAG 10
+ +G++I+AG
Sbjct: 84 LEMGVIIFAG 93


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7

Query: 1 MAVGIVIYAG 10
+ +G++I+AG
Sbjct: 84 LEMGVIIFAG 93


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6

Query: 1 MAVGIVIYAG 10
+ +G++I+AG
Sbjct: 84 LEMGVIIFAG 93


>sp|RF1_METM5|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C5

Query: 1 MAVGIVIYAG 10
+ +G++I+AG
Sbjct: 84 LEMGVIIFAG 93


>sp|GUAAA_SACS2|GMP synthase [glutamine-hydrolyzing] subunit A|Saccharolobus

Query: 1 MAVGIVIYAG 10
M VG+V Y G
Sbjct: 1 MKVGLVYYGG 10


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii

Query: 4 GIVIYAG 10
G+VI+AG
Sbjct: 87 GVVIFAG 93


>sp|PDXT_SULTO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Sulfurisphaera tokodaii

Query: 1 MAVGIVIYAG 10
M +GIV Y G
Sbjct: 1 MKIGIVAYQG 10


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 1 MAVGIVIYAG 10
+AVG + Y G
Sbjct: 641 LAVGFITYRG 650


>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 AVGIVIY 8
A+GIV+Y
Sbjct: 37 AIGIVVY 43




58|Sequence|286|295|VIYAGHETKA

>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VIYAGHETK 9
V+Y GH+ K
Sbjct: 75 VVYNGHQIK 83


>sp|DTDA_SACI7|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VIYAGHETKA 10
VI++ HE+KA
Sbjct: 43 VIFSRHESKA 52


>sp|DTDA_SACI6|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VIYAGHETKA 10
VI++ HE+KA
Sbjct: 43 VIFSRHESKA 52


>sp|DTDA_SACI4|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VIYAGHETKA 10
VI++ HE+KA
Sbjct: 43 VIFSRHESKA 52


>sp|DTDA_SACI3|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VIYAGHETKA 10
VI++ HE+KA
Sbjct: 43 VIFSRHESKA 52


>sp|DTDA_SACI2|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VIYAGHETKA 10
VI++ HE+KA
Sbjct: 43 VIFSRHESKA 52


>sp|DTDA_SACI1|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VIYAGHETKA 10
VI++ HE+KA
Sbjct: 43 VIFSRHESKA 52


>sp|DTDA_SACS2|D-AMINOACYL-TRNA deacylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VIYAGHETKA 10
VI++ HE+KA
Sbjct: 43 VIFSRHESKA 52


>sp|IF2G_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 YAGHETK 9
Y GHET+
Sbjct: 75 YCGHETE 81


>sp|RL3_STAMF|LARGE ribosomal subunit protein uL3|Staphylothermus marinus (strain ATCC

Query: 1 VIYAGHETK 9
+IY HE+K
Sbjct: 384 IIYYSHESK 392


>sp|IF2G_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 YAGHETK 9
Y GHET+
Sbjct: 75 YCGHETE 81


>sp|IF2G_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC

Query: 3 YAGHETK 9
Y GHET+
Sbjct: 75 YCGHETE 81


>sp|IF2G_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 3 YAGHETK 9
Y GHET+
Sbjct: 75 YCGHETE 81


>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 3 YAGHETK 9
Y GHET+
Sbjct: 75 YCGHETE 81


>sp|ARFB_METRM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanobrevibacter ruminantium

Query: 1 VIYAGHETK 9
VIY HE K
Sbjct: 62 VIYPAHELK 70


>sp|LEU3_HALVD|3-ISOPROPYLMALATE dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 2 IYAGHETK 9
+Y+GHE +
Sbjct: 118 VYSGHEDR 125




59|Sequence|291|300|HETKAMLNNS

>sp|RPIA_METM7|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain C7 /

Query: 2 ETKAMLNN 9
ET+ MLNN
Sbjct: 203 ETEIMLNN 210


>sp|RPIA_METM6|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain C6 /

Query: 2 ETKAMLNN 9
ET+ MLNN
Sbjct: 203 ETEIMLNN 210


>sp|RPIA_METMP|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain DSM 14266

Query: 2 ETKAMLNN 9
ET+ MLNN
Sbjct: 203 ETETMLNN 210


>sp|RPIA_METM5|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain C5 /

Query: 2 ETKAMLNN 9
ET+ MLNN
Sbjct: 203 ETENMLNN 210




60|Sequence|296|305|MLNNSGPRYK

>sp|RL18_HALSA|LARGE ribosomal subunit protein uL18|Halobacterium salinarum (strain

Query: 5 SGPRYK 10
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|RL18_HALS3|LARGE ribosomal subunit protein uL18|Halobacterium salinarum (strain

Query: 5 SGPRYK 10
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|RL18_HALLT|LARGE ribosomal subunit protein uL18|Halorubrum lacusprofundi (strain

Query: 5 SGPRYK 10
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|RL18_HALMA|LARGE ribosomal subunit protein uL18|Haloarcula marismortui (strain

Query: 5 SGPRYK 10
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 5 SGPRYK 10
+GPRYK
Sbjct: 8292 AGPRYK 8297


>sp|RL18_METBU|LARGE ribosomal subunit protein uL18|Methanococcoides burtonii (strain

Query: 5 SGPRYK 10
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 1 MLNNSGP 7
MLN++GP
Sbjct: 356 MLNSAGP 362


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 MLNNSGP 7
MLN++GP
Sbjct: 356 MLNSAGP 362


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 6 GPRYK 10
GPRYK
Sbjct: 783 GPRYK 787


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 4 NSGPRY 9
+SGPRY
Sbjct: 401 SSGPRY 406


>sp|RL18_METMA|LARGE ribosomal subunit protein uL18|Methanosarcina mazei (strain ATCC

Query: 5 SGPRYK 10
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|RL18_METAR|LARGE ribosomal subunit protein uL18|Methanocella arvoryzae (strain DSM

Query: 5 SGPRYK 10
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|RL18_HALMT|LARGE ribosomal subunit protein uL18|Haloferax mediterranei (strain

Query: 5 SGPRYK 10
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|RL18_METBF|LARGE ribosomal subunit protein uL18|Methanosarcina barkeri (strain

Query: 5 SGPRYK 10
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|RL18_HALVD|LARGE ribosomal subunit protein uL18|Haloferax volcanii (strain ATCC

Query: 5 SGPRYK 10
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|RL18_METAC|LARGE ribosomal subunit protein uL18|Methanosarcina acetivorans (strain

Query: 5 SGPRYK 10
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|RL18_HALWD|LARGE ribosomal subunit protein uL18|Haloquadratum walsbyi (strain DSM

Query: 5 SGPRYK 10
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|CAS1_METTH|CRISPR-ASSOCIATED endonuclease Cas1|Methanothermobacter thermautotrophicus (strain

Query: 1 MLNNSGPR 8
+LNNSG R
Sbjct: 274 LLNNSGKR 281


>sp|RL18_METTH|LARGE ribosomal subunit protein uL18|Methanothermobacter

Query: 6 GPRYK 10
GPRYK
Sbjct: 4 GPRYK 8


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 1 MLNNSGPR 8
+LNN+ PR
Sbjct: 703 ILNNASPR 710


>sp|RL18_PYRNV|LARGE ribosomal subunit protein uL18|Pyrobaculum neutrophilum (strain

Query: 6 GPRYK 10
GPRYK
Sbjct: 4 GPRYK 8


>sp|RL18_HYPBU|LARGE ribosomal subunit protein uL18|Hyperthermus butylicus (strain DSM

Query: 6 GPRYK 10
GPRYK
Sbjct: 4 GPRYK 8


>sp|RL18_PYRIL|LARGE ribosomal subunit protein uL18|Pyrobaculum islandicum (strain DSM

Query: 6 GPRYK 10
GPRYK
Sbjct: 4 GPRYK 8


>sp|RL18_STAMF|LARGE ribosomal subunit protein uL18|Staphylothermus marinus (strain

Query: 6 GPRYK 10
GPRYK
Sbjct: 4 GPRYK 8


>sp|RL18_ARCFU|LARGE ribosomal subunit protein uL18|Archaeoglobus fulgidus (strain

Query: 6 GPRYK 10
GPRYK
Sbjct: 6 GPRYK 10


>sp|RL18_DESA1|LARGE ribosomal subunit protein uL18|Desulfurococcus amylolyticus

Query: 6 GPRYK 10
GPRYK
Sbjct: 4 GPRYK 8




61|Sequence|301|310|GPRYKRSKIE

>sp|SPEE_SULAC|POLYAMINE aminopropyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PRYKRSKIE 10
P+Y R KIE
Sbjct: 278 PKYIREKIE 286


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 GPRYK 5
GPRYK
Sbjct: 8293 GPRYK 8297


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPRYKRSKIE 10
GP Y R +E
Sbjct: 403 GPNYSREDVE 412


>sp|EF1B_PYRIL|ELONGATION factor 1-beta|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GPRYKRSKIE 10
P+YK K+E
Sbjct: 32 APKYKVDKVE 41


>sp|EF1B_PYRAE|ELONGATION factor 1-beta|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GPRYKRSKIE 10
P+YK K+E
Sbjct: 32 APKYKVDKVE 41


>sp|EF1B_PYRCJ|ELONGATION factor 1-beta|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GPRYKRSKIE 10
P+YK K+E
Sbjct: 32 APKYKVDKVE 41


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GPRYKRS 7
GP+YKR
Sbjct: 896 GPKYKRD 902


>sp|TRM1_SULAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfolobus acidocaldarius

Query: 1 GPRYKRSKIE 10
GP YK S ++
Sbjct: 274 GPAYKESLVD 283


>sp|EF1B_PYRAR|ELONGATION factor 1-beta|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GPRYKRSKIE 10
P+YK K+E
Sbjct: 32 SPKYKVDKVE 41


>sp|Y797_METJA|UNCHARACTERIZED ABC transporter permease MJ0797|Methanocaldococcus jannaschii

Query: 2 PRYKRSKIE 10
P YK SK++
Sbjct: 351 PAYKASKLD 359




62|Sequence|306|315|RSKIERRMNI

>sp|DHQS_METS3|3-DEHYDROQUINATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 RSKIERR 7
RSKIERR
Sbjct: 295 RSKIERR 301


>sp|CDPAS_STAMF|CDP-ARCHAEOL synthase|Staphylothermus marinus (strain ATCC 43588

Query: 2 SKIERRMNI 10
S I+RRMNI
Sbjct: 103 SFIKRRMNI 111


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 RSKIERRMN 9
R K+ERR N
Sbjct: 265 REKLERRFN 273


>sp|DHQS_METB6|3-DEHYDROQUINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 RSKIERR 7
R+KIERR
Sbjct: 255 RTKIERR 261


>sp|DHQS_NITMS|3-DEHYDROQUINATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 RSKIERR 7
RSKIERR
Sbjct: 278 RSKIERR 284


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RSKIERRMNI 10
R+ IERR+NI
Sbjct: 841 RNLIERRINI 850


>sp|DHQS_CENSY|3-DEHYDROQUINATE synthase|Cenarchaeum symbiosum (strain A)

Query: 1 RSKIERR 7
RSKIERR
Sbjct: 263 RSKIERR 269


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 SKIERRMN 9
S IERR+N
Sbjct: 96 SAIERRLN 103




63|Sequence|311|320|RRMNIDIFFC

>sp|MOAA_AERPE|PROBABLE GTP 3',8-cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 4 NIDIFFC 10
N+D FFC
Sbjct: 22 NLDCFFC 28


>sp|KCY_SULAC|CYTIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RRMNIDI 7
+RMNIDI
Sbjct: 40 KRMNIDI 46


>sp|SPEH_ARCFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 MNIDIFFC 10
+N+DIF C
Sbjct: 75 VNLDIFTC 82


>sp|IF2B_PYRAR|TRANSLATION initiation factor 2 subunit|Pyrobaculum arsenaticum (strain DSM

Query: 1 RRMNIDIFF 9
+R+N DI+F
Sbjct: 48 KRLNRDIYF 56


>sp|BIOD_NITMS|ATP-DEPENDENT dethiobiotin synthetase BioD|Nitrosopumilus maritimus (strain

Query: 1 RRMNIDI 7
R+MN+D+
Sbjct: 27 RKMNVDV 33


>sp|Y394_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 RMNIDIF 8
R+N+D+F
Sbjct: 429 RINVDVF 435


>sp|IF2B_PYRNV|TRANSLATION initiation factor 2 subunit|Pyrobaculum neutrophilum (strain DSM

Query: 1 RRMNIDIFF 9
+R+N DI+F
Sbjct: 48 KRLNRDIYF 56


>sp|IF2B_PYRIL|TRANSLATION initiation factor 2 subunit|Pyrobaculum islandicum (strain DSM

Query: 1 RRMNIDIFF 9
+R+N D++F
Sbjct: 48 KRLNRDVYF 56


>sp|IF2B_PYRAE|TRANSLATION initiation factor 2 subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 RRMNIDIFF 9
+R+N D++F
Sbjct: 48 KRLNRDVYF 56




64|Sequence|316|325|DIFFCIGILI

>sp|THII_THEVO|TRNA sulfurtransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DIFFC 5
DIFFC
Sbjct: 196 DIFFC 200


>sp|Y795_METJA|UNCHARACTERIZED protein MJ0795|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IFFCIGIL 9
I FC+G++
Sbjct: 486 ILFCVGVV 493




65|Sequence|321|330|IGILILMCLI

>sp|Y795_METJA|UNCHARACTERIZED protein MJ0795|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IGILILMCL 9
+GI IL C+
Sbjct: 482 VGIAILFCV 490




66|Sequence|326|335|LMCLIGAVGH

>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 LMCLIGAVGH 10
L CLIG H
Sbjct: 107 LACLIGTAAH 116


>sp|MTD_METMA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina mazei

Query: 2 MCLIGAVGH 10
+CL A GH
Sbjct: 226 VCLTAAAGH 234


>sp|MTD_METAC|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 2 MCLIGAVGH 10
+CL A GH
Sbjct: 226 VCLTAAAGH 234


>sp|LYSY_PYRNV|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 MCLIGAVG 9
+C+IGA G
Sbjct: 4 VCIIGASG 11


>sp|RL14_PYRIL|LARGE ribosomal subunit protein uL14|Pyrobaculum islandicum (strain DSM

Query: 1 LMCLIGAVGH 10
L+ +IG VGH
Sbjct: 38 LVRVIGVVGH 47


>sp|RL14_PYRCJ|LARGE ribosomal subunit protein uL14|Pyrobaculum calidifontis (strain

Query: 1 LMCLIGAVGH 10
L+ +IG VGH
Sbjct: 38 LVRVIGVVGH 47


>sp|RL14_PYRAR|LARGE ribosomal subunit protein uL14|Pyrobaculum arsenaticum (strain

Query: 1 LMCLIGAVGH 10
L+ +IG VGH
Sbjct: 38 LVRVIGVVGH 47


>sp|RL14_PYRAE|LARGE ribosomal subunit protein uL14|Pyrobaculum aerophilum (strain

Query: 1 LMCLIGAVGH 10
L+ +IG VGH
Sbjct: 38 LVRVIGVVGH 47


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 MCLIGAVG 9
+C+IGA G
Sbjct: 3 VCIIGASG 10


>sp|TATC_METAR|SEC-INDEPENDENT protein translocase protein TatC|Methanocella arvoryzae (strain

Query: 2 MCLIGAV 8
MC IGA+
Sbjct: 78 MCFIGAI 84


>sp|AROE_METM6|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain C6 /

Query: 4 LIGAVGH 10
LIG +GH
Sbjct: 8 LIGLIGH 14


>sp|MTRE_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 1 LMCLIGA 7
LMC IGA
Sbjct: 66 LMCSIGA 72


>sp|PYRH_CENSY|URIDYLATE kinase|Cenarchaeum symbiosum (strain A)

Query: 1 LMCLIGAVGH 10
L+C +GA H
Sbjct: 81 LICALGAKAH 90


>sp|IF2P_THEVO|PROBABLE translation initiation factor IF-2|Thermoplasma volcanium (strain

Query: 1 LMCLIGAVGH 10
++C++G V H
Sbjct: 18 IVCVLGHVDH 27


>sp|IF2P_THEAC|PROBABLE translation initiation factor IF-2|Thermoplasma acidophilum

Query: 1 LMCLIGAVGH 10
++C++G V H
Sbjct: 18 IVCVLGHVDH 27


>sp|IF2P_METLZ|PROBABLE translation initiation factor IF-2|Methanocorpusculum labreanum

Query: 1 LMCLIGAVGH 10
++C++G V H
Sbjct: 9 IVCVLGHVDH 18


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 1 LMCLIGAVGH 10
++C++G V H
Sbjct: 19 IVCVLGHVDH 28


>sp|IF2P_METHJ|PROBABLE translation initiation factor IF-2|Methanospirillum hungatei JF-1

Query: 1 LMCLIGAVGH 10
++C++G V H
Sbjct: 22 IVCVLGHVDH 31




67|Sequence|331|340|GAVGHSIWNG

>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 2 AVGHSIWNG 10
A+GH+IW
Sbjct: 202 AIGHTIWQA 210


>sp|AROE_METJA|SHIKIMATE dehydrogenase (NADP(+))|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GAVGHSIWNG 10
GAV IW G
Sbjct: 255 GAVAFKIWTG 264


>sp|AROE_METVS|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus vannielii (strain ATCC 35089

Query: 1 GAVGHSIWNG 10
GAV IW G
Sbjct: 257 GAVSFEIWTG 266


>sp|AROE_METM7|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain C7 /

Query: 1 GAVGHSIWNG 10
GAV IW G
Sbjct: 253 GAVSFEIWTG 262


>sp|AROE_METM6|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain C6 /

Query: 1 GAVGHSIWNG 10
GAV IW G
Sbjct: 253 GAVSFQIWTG 262


>sp|AROE_METMP|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain DSM 14266

Query: 1 GAVGHSIWNG 10
GAV IW G
Sbjct: 253 GAVSFEIWTG 262


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GAVGHSIWNG 10
G + H IW+
Sbjct: 976 GIIAHPIWHA 985


>sp|RFHPS_METJA|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VGHSIW 8
VGH IW
Sbjct: 323 VGHKIW 328


>sp|NFI_THEKO|ENDONUCLEASE V|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GHSIWNG 10
GH+ W+G
Sbjct: 185 GHTSWSG 191


>sp|TRPE2_HALMA|ANTHRANILATE synthase component 1 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 GAVGHSIWNG 10
G VG+ W+G
Sbjct: 451 GGVGYFDWDG 460


>sp|TRPE1_HALSA|ANTHRANILATE synthase component 1 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GAVGHSIWNG 10
G VG+ W G
Sbjct: 450 GGVGYFSWTG 459


>sp|KORA_METTH|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter thermautotrophicus

Query: 1 GAVGHSIWNG 10
GAV ++W+G
Sbjct: 62 GAVIGAVWSG 71


>sp|DHYS_PICTO|PROBABLE deoxyhypusine synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 GAVGHSIWN 9
G+VG +W+
Sbjct: 194 GSVGSQLWS 202




68|Sequence|336|345|SIWNGTFEEH

>sp|MTBA_METBA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina barkeri

Query: 2 IWNGTFEE 9
+WNGT EE
Sbjct: 289 LWNGTPEE 296


>sp|PDXT_SULTO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Sulfurisphaera tokodaii

Query: 3 WNGTFEEH 10
+ G+FEEH
Sbjct: 8 YQGSFEEH 15


>sp|PDXT_SULAC|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Sulfolobus acidocaldarius

Query: 3 WNGTFEEH 10
+ G+FEEH
Sbjct: 8 YQGSFEEH 15


>sp|PDXT_SACS2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus solfataricus

Query: 3 WNGTFEEH 10
+ G+FEEH
Sbjct: 8 YQGSFEEH 15


>sp|PDXT_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 3 WNGTFEEH 10
+ G+FEEH
Sbjct: 8 YQGSFEEH 15


>sp|PDXT_SACI6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 3 WNGTFEEH 10
+ G+FEEH
Sbjct: 8 YQGSFEEH 15


>sp|PDXT_SACI4|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 3 WNGTFEEH 10
+ G+FEEH
Sbjct: 8 YQGSFEEH 15


>sp|PDXT_SACI3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 3 WNGTFEEH 10
+ G+FEEH
Sbjct: 8 YQGSFEEH 15


>sp|PDXT_METS5|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Metallosphaera sedula (strain

Query: 3 WNGTFEEH 10
+ G+FEEH
Sbjct: 8 YQGSFEEH 15


>sp|PDXT_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 3 WNGTFEEH 10
+ G+FEEH
Sbjct: 8 YQGSFEEH 15


>sp|PDXT_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 3 WNGTFEEH 10
+ G+FEEH
Sbjct: 8 YQGSFEEH 15


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 WNGTFE 8
WNG FE
Sbjct: 550 WNGDFE 555


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SIWNGTF 7
SIW GTF
Sbjct: 368 SIWKGTF 374


>sp|PGP_METAC|PHOSPHOGLYCOLATE phosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 NGTFEE 9
NGTFEE
Sbjct: 75 NGTFEE 80


>sp|HIS6_THEGJ|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus gammatolerans

Query: 3 WNGTFEE 9
WNG+F E
Sbjct: 133 WNGSFWE 139


>sp|MTBA_METMA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IWNGTFEE 9
+WNGT E+
Sbjct: 289 LWNGTPED 296


>sp|MTBA_METAC|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina acetivorans (strain ATCC

Query: 2 IWNGTFEE 9
+WNGT E+
Sbjct: 289 LWNGTPED 296


>sp|HIS6_THEKO|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus kodakarensis

Query: 3 WNGTFEE 9
WNG+F E
Sbjct: 133 WNGSFWE 139


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 IWNGTFEE 9
IW+GT E+
Sbjct: 173 IWSGTIEK 180


>sp|Y1614_METJA|UNCHARACTERIZED protein MJ1614|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NGTFEEH 10
NG F+EH
Sbjct: 197 NGEFDEH 203


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 3 WNGTFEEH 10
W G + EH
Sbjct: 482 WGGEYSEH 489


>sp|Y2307_ARCFU|UNCHARACTERIZED protein AF_2307|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SIWNGTFEE 9
SI NG +EE
Sbjct: 208 SILNGIYEE 216


>sp|Y226_ARCFU|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase AF_0226|Archaeoglobus

Query: 1 SIWNGTFEE 9
++W G F+E
Sbjct: 119 AVWVGAFDE 127


>sp|HIS6_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 3 WNGTFEE 9
WNG F E
Sbjct: 133 WNGKFWE 139


>sp|KPYK_THELN|PYRUVATE kinase|Thermococcus litoralis (strain ATCC 51850

Query: 4 NGTFEEH 10
+GT EEH
Sbjct: 41 HGTLEEH 47


>sp|RSMA_METMA|PROBABLE ribosomal RNA small subunit|Methanosarcina mazei (strain ATCC

Query: 1 SIWNGTFEEH 10
+I GTF++H
Sbjct: 10 NIKGGTFDQH 19


>sp|RSMA_METBF|PROBABLE ribosomal RNA small subunit|Methanosarcina barkeri (strain Fusaro

Query: 1 SIWNGTFEEH 10
+I GTF++H
Sbjct: 20 NIKGGTFDQH 29


>sp|RSMA_METAC|PROBABLE ribosomal RNA small subunit|Methanosarcina acetivorans (strain

Query: 1 SIWNGTFEEH 10
+I GTF++H
Sbjct: 10 NIKGGTFDQH 19


>sp|PUR1_PYRAB|AMIDOPHOSPHORIBOSYLTRANSFERASE abyssi (strain GE5 /

Query: 1 SIWNG 5
S+WNG
Sbjct: 43 SVWNG 47


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 IWNGTFEE 9
+WNG+ ++
Sbjct: 255 LWNGSMQD 262


>sp|TRUD_METVS|PROBABLE tRNA pseudouridine synthase D|Methanococcus vannielii (strain

Query: 3 WNGTF 7
WNG+F
Sbjct: 52 WNGSF 56


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 2 IWNGTFE 8
IW GT+E
Sbjct: 221 IWPGTYE 227


>sp|RL6_HALSA|LARGE ribosomal subunit protein uL6|Halobacterium salinarum (strain

Query: 5 GTFEEH 10
GTFE H
Sbjct: 64 GTFESH 69




69|Sequence|341|350|TFEEHPPFDV

>sp|AROD_PYRAE|3-DEHYDROQUINATE dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FEEHPPFDV 10
FE+ PP DV
Sbjct: 121 FEKTPPLDV 129


>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FEEHPPFD 9
FEE PP D
Sbjct: 257 FEEEPPKD 264


>sp|GLCDH_METPS|GLUCOSE 1-dehydrogenase|Methanocella paludicola (strain DSM 17711

Query: 3 EEHPPFDV 10
E+H PFD+
Sbjct: 237 EKHGPFDI 244


>sp|AROD_PYRAB|3-DEHYDROQUINATE dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 2 FEEHPPFDV 10
F E PPF V
Sbjct: 114 FRETPPFGV 122


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 TFEEHP 6
TFE+HP
Sbjct: 168 TFEQHP 173


>sp|Y2263_ARCFU|UNCHARACTERIZED protein AF_2263|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FEEHPPFDV 10
F EHP F V
Sbjct: 18 FPEHPEFSV 26


>sp|PANB_PYRAB|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 FEEHPPF 8
+EE PPF
Sbjct: 222 YEESPPF 228


>sp|PIMT_PYRCJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 FEEHPPFD 9
E H PFD
Sbjct: 137 LERHAPFD 144


>sp|SERA_METTH|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 FEEHPP 7
FEE PP
Sbjct: 258 FEEEPP 263


>sp|PIMT_PYRAE|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FEEHPPFD 9
E+H PFD
Sbjct: 137 LEKHAPFD 144


>sp|RS4_SULTO|SMALL ribosomal subunit protein uS4|Sulfurisphaera tokodaii (strain DSM

Query: 2 FEEHPP 7
F++HPP
Sbjct: 161 FKQHPP 166


>sp|HEM3_SACI7|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain

Query: 2 FEEHPPFDV 10
E PP+D+
Sbjct: 93 LERDPPYDI 101


>sp|HEM3_SACI6|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 FEEHPPFDV 10
E PP+D+
Sbjct: 93 LERDPPYDI 101


>sp|HEM3_SACI4|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.14.25

Query: 2 FEEHPPFDV 10
E PP+D+
Sbjct: 93 LERDPPYDI 101


>sp|HEM3_SACI3|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.16.27)

Query: 2 FEEHPPFDV 10
E PP+D+
Sbjct: 93 LERDPPYDI 101


>sp|HEM3_SACI2|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain L.S.2.15

Query: 2 FEEHPPFDV 10
E PP+D+
Sbjct: 93 LERDPPYDI 101


>sp|PIMT_PYRIL|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 FEEHPPFD 9
E H PFD
Sbjct: 137 LERHAPFD 144


>sp|PANB_STAMF|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 2 FEEHPPF 8
+EE PPF
Sbjct: 222 YEEIPPF 228


>sp|HEM3_SACS2|PROBABLE porphobilinogen deaminase|Saccharolobus solfataricus (strain ATCC

Query: 3 EEHPPFDV 10
E PP+D+
Sbjct: 94 ERDPPYDI 101


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 HPPFDV 10
+PPFDV
Sbjct: 342 YPPFDV 347


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 HPPFDV 10
+PPFDV
Sbjct: 342 YPPFDV 347


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 HPPFDV 10
+PPFDV
Sbjct: 342 YPPFDV 347


>sp|PIMT_PYRNV|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 FEEHPPFD 9
E H PFD
Sbjct: 137 LERHAPFD 144


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 1 TFEEHPPFD 9
T EEHP F+
Sbjct: 274 TVEEHPDFE 282


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 1 TFEEHPPFD 9
T EEHP F+
Sbjct: 274 TVEEHPDFE 282


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 5 HPPFDV 10
+PPFDV
Sbjct: 342 YPPFDV 347


>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain ATCC

Query: 5 HPPFDV 10
HP FDV
Sbjct: 118 HPEFDV 123


>sp|MTNA_AERPE|PUTATIVE methylthioribose-1-phosphate isomerase|Aeropyrum pernix (strain

Query: 6 PPFDV 10
PPFDV
Sbjct: 358 PPFDV 362


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 HPPFDV 10
+PPFDV
Sbjct: 342 YPPFDV 347


>sp|AATB_STAMF|A-TYPE ATP synthase subunit B|Staphylothermus marinus (strain ATCC 43588

Query: 5 HPPFDV 10
+PPFD+
Sbjct: 345 YPPFDI 350


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 3 EEHPPFD 9
E H PFD
Sbjct: 355 ESHDPFD 361


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 3 EEHPPFD 9
E H PFD
Sbjct: 355 ESHDPFD 361


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 TFEEHP 6
TFE+HP
Sbjct: 169 TFEQHP 174


>sp|MFNA_METS3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanobrevibacter smithii

Query: 4 EHPPFD 9
E PPFD
Sbjct: 214 EFPPFD 219


>sp|NADM_METTI|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanolobus tindarius

Query: 6 PPFDV 10
PPFDV
Sbjct: 91 PPFDV 95


>sp|NADM_ARCFU|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 PPFDV 10
PPFDV
Sbjct: 96 PPFDV 100


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FEEHPPFD 9
F E PPF+
Sbjct: 381 FSEIPPFE 388


>sp|PURQ_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanothermobacter thermautotrophicus

Query: 1 TFEEHPPFD 9
T EHP F+
Sbjct: 102 TVNEHPKFN 110


>sp|NADM_PYRAR|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 6 PPFDV 10
PPFDV
Sbjct: 94 PPFDV 98




70|Sequence|346|355|PPFDVPDANG

>sp|GSA2_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 2|Cenarchaeum symbiosum (strain A)

Query: 2 PFDVPDANG 10
P+DVP++ G
Sbjct: 163 PYDVPESGG 171


>sp|SAHH_THEAC|ADENOSYLHOMOCYSTEINASE acidophilum (strain ATCC 25905

Query: 1 PPFDVPDAN 9
P FDV DAN
Sbjct: 162 PMFDVNDAN 170


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 1 PPFDVPDAN 9
P FDV DAN
Sbjct: 162 PMFDVNDAN 170


>sp|SFSA_PYRNV|SUGAR fermentation stimulation protein homolog|Pyrobaculum neutrophilum

Query: 2 PFDVPDANG 10
P D PDA G
Sbjct: 7 PLDEPDARG 15


>sp|XPB_ARCFU|DNA 3'-5' translocase XPB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DVPDAN 9
DVPDAN
Sbjct: 389 DVPDAN 394


>sp|CBSB_SACS2|CYTOCHROME b558/566 subunit B|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PFDVPDAN 9
P ++PD+N
Sbjct: 39 PLNIPDSN 46


>sp|XPB1_SULTO|DNA 3'-5' helicase/translocase StoXPB1|Sulfurisphaera tokodaii (strain

Query: 3 FDVPDAN 9
D+PDAN
Sbjct: 470 LDIPDAN 476


>sp|SDX_SULTO|SULREDOXIN tokodaii (strain DSM 16993

Query: 1 PPFDVPDA 8
PP+ PDA
Sbjct: 79 PPYVAPDA 86


>sp|SDX_SACS2|PROBABLE sulredoxin|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PPFDVPDA 8
PP+ PDA
Sbjct: 79 PPYVAPDA 86


>sp|PRIL_HALMA|DNA primase large subunit PriL|Haloarcula marismortui (strain ATCC

Query: 2 PFDVPDA 8
PF VPDA
Sbjct: 192 PFTVPDA 198


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 3 FDVPDANG 10
DVPDA+G
Sbjct: 202 LDVPDADG 209


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 1 PPFDVPDANG 10
PP VPDA G
Sbjct: 82 PPHVVPDAFG 91


>sp|HICDH_PYRHO|ISOCITRATE/HOMOISOCITRATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PFDVP 6
PFDVP
Sbjct: 72 PFDVP 76


>sp|HUTH_THEAC|PROBABLE histidine ammonia-lyase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PPFDVPDA 8
PPF PD+
Sbjct: 363 PPFLTPDS 370


>sp|TOP6B_SACI7|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 PPFDVPDANG 10
PP +VP+A G
Sbjct: 82 PPQEVPNAFG 91


>sp|TOP6B_SACI6|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PPFDVPDANG 10
PP +VP+A G
Sbjct: 82 PPQEVPNAFG 91


>sp|TOP6B_SACI4|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PPFDVPDANG 10
PP +VP+A G
Sbjct: 82 PPQEVPNAFG 91


>sp|TOP6B_SACI3|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.27)

Query: 1 PPFDVPDANG 10
PP +VP+A G
Sbjct: 82 PPQEVPNAFG 91


>sp|TOP6B_SACI2|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PPFDVPDANG 10
PP +VP+A G
Sbjct: 82 PPQEVPNAFG 91


>sp|TOP6B_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 1 PPFDVPDANG 10
PP +VP+A G
Sbjct: 82 PPQEVPNAFG 91


>sp|TOP6B_SACI1|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 PPFDVPDANG 10
PP +VP+A G
Sbjct: 82 PPQEVPNAFG 91


>sp|TOP6B_SACS2|TYPE 2 DNA topoisomerase 6|Saccharolobus solfataricus (strain ATCC

Query: 1 PPFDVPDANG 10
PP +VP+A G
Sbjct: 82 PPQEVPNAFG 91


>sp|Y856_METTH|METALLOPROTEASE MTH_856|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PPFDVPDA 8
PP DVP A
Sbjct: 110 PPSDVPAA 117


>sp|AGL3_SULAC|UDP-SULFOQUINOVOSE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PPFDVPDA 8
P FD+P++
Sbjct: 151 PAFDIPES 158


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 PFDVPDA 8
P+D PDA
Sbjct: 356 PYDPPDA 362


>sp|RSMA_NATPD|PROBABLE ribosomal RNA small subunit|Natronomonas pharaonis (strain ATCC

Query: 1 PPFDVPD 7
PP++VPD
Sbjct: 197 PPYEVPD 203


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PPFDVPDANG 10
PP D D NG
Sbjct: 107 PPEDFRDVNG 116


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PPFDVPDANG 10
PP D D NG
Sbjct: 107 PPEDFRDVNG 116


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PPFDVPDANG 10
PP D D NG
Sbjct: 107 PPEDFRDVNG 116


>sp|PCNA_METMJ|DNA polymerase sliding clamp|Methanoculleus marisnigri (strain ATCC

Query: 3 FDVPDANG 10
FD+ D NG
Sbjct: 227 FDIADGNG 234


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PPFDVPDANG 10
PP D D NG
Sbjct: 107 PPEDFRDVNG 116


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPFDVPDANG 10
PP D D NG
Sbjct: 107 PPEDFRDVNG 116


>sp|AATF_METM5|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain C5 /

Query: 4 DVPDANG 10
+VPD NG
Sbjct: 71 EVPDKNG 77


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 2 PFDVPDA 8
PFD P+A
Sbjct: 169 PFDSPEA 175


>sp|AATF_METM7|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain C7 /

Query: 4 DVPDANG 10
+VPD NG
Sbjct: 71 EVPDKNG 77


>sp|AATF_METM6|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain C6 /

Query: 4 DVPDANG 10
+VPD NG
Sbjct: 71 EVPDKNG 77


>sp|IF2B_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 3 FDVPDAN 9
F+VPD N
Sbjct: 24 FEVPDPN 30


>sp|IF2B_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 3 FDVPDAN 9
F+VPD N
Sbjct: 24 FEVPDPN 30


>sp|Y3887_METAC|UPF0284 protein MA_3887|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PPFDVP 6
PP+D P
Sbjct: 68 PPYDTP 73




71|Sequence|351|360|PDANGSFLPS

>sp|RS4E_META3|SMALL ribosomal subunit protein eS4|Methanococcus aeolicus (strain ATCC

Query: 1 PDANGSFL 8
PDAN SFL
Sbjct: 94 PDANESFL 101


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DANGSFLP 9
DAN SF+P
Sbjct: 153 DANFSFVP 160


>sp|MFNF_METJA|(4- jannaschii (strain ATCC 43067

Query: 2 DANGSFLPS 10
D NG+FL S
Sbjct: 93 DVNGNFLTS 101


>sp|MOAA_HALWD|PROBABLE GTP 3',8-cyclase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 NGSFLP 9
NG+FLP
Sbjct: 98 NGTFLP 103


>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PDANGSF 7
PD NG F
Sbjct: 12 PDENGKF 18


>sp|GSA_METAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ANGSFLP 9
ANG FLP
Sbjct: 389 ANGVFLP 395


>sp|MOAA_HALSA|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 4 NGSFLP 9
NG+FLP
Sbjct: 98 NGTFLP 103


>sp|MOAA_HALS3|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 4 NGSFLP 9
NG+FLP
Sbjct: 98 NGTFLP 103




72|Sequence|356|365|SFLPSALGGF

>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 1 SFLPSALGG 9
SFLPS GG
Sbjct: 910 SFLPSTRGG 918


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 SFLPSALGG 9
S+LPS+ GG
Sbjct: 864 SYLPSSRGG 872


>sp|RL4_METST|LARGE ribosomal subunit protein uL4|Methanosphaera stadtmanae (strain

Query: 1 SFLPSALGG 9
+F+P A+GG
Sbjct: 81 AFVPQAIGG 89


>sp|Y1512_SULAC|UPF0173 metal-dependent hydrolase Saci_1512|Sulfolobus acidocaldarius

Query: 2 FLPSALGGF 10
F+P+ +GGF
Sbjct: 93 FIPANVGGF 101


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 1 SFLPSALGGF 10
S LP+ +GGF
Sbjct: 405 SSLPARIGGF 414


>sp|RL4_METVS|LARGE ribosomal subunit protein uL4|Methanococcus vannielii (strain

Query: 1 SFLPSALGG 9
+F+P A+GG
Sbjct: 79 AFVPQAVGG 87


>sp|RL4_METTH|LARGE ribosomal subunit protein uL4|Methanothermobacter

Query: 1 SFLPSALGG 9
+F+P A+GG
Sbjct: 80 AFVPQAVGG 88


>sp|RL4_METMP|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain

Query: 1 SFLPSALGG 9
+F+P A+GG
Sbjct: 79 AFVPQAVGG 87


>sp|RL4_METM7|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain

Query: 1 SFLPSALGG 9
+F+P A+GG
Sbjct: 79 AFVPQAVGG 87


>sp|RL4_METM5|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain

Query: 1 SFLPSALGG 9
+F+P A+GG
Sbjct: 79 AFVPQAVGG 87


>sp|RL4_META3|LARGE ribosomal subunit protein uL4|Methanococcus aeolicus (strain ATCC

Query: 1 SFLPSALGG 9
+F+P A+GG
Sbjct: 79 AFVPQAVGG 87


>sp|RL4_METM6|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain

Query: 1 SFLPSALGG 9
+F+P A+GG
Sbjct: 79 AFVPQAVGG 87


>sp|CYDE_METM5|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain C5 /

Query: 2 FLPSALGGF 10
LP+ +GGF
Sbjct: 72 LLPAVVGGF 80


>sp|RL22_METHJ|LARGE ribosomal subunit protein uL22|Methanospirillum hungatei JF-1

Query: 1 SFLPSALG 8
SF+P A+G
Sbjct: 126 SFMPRAMG 133


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 PSALGGF 10
PSA GGF
Sbjct: 349 PSAKGGF 355


>sp|RL4_METS3|LARGE ribosomal subunit protein uL4|Methanobrevibacter smithii (strain

Query: 1 SFLPSALGG 9
+F+P A+GG
Sbjct: 80 AFVPMAVGG 88


>sp|AIPS_METTH|ARCHAETIDYLINOSITOL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 2 FLPSALGGF 10
F P+A GGF
Sbjct: 79 FRPTAFGGF 87


>sp|EF1A_HALWD|ELONGATION factor 1-alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SFLPSALGG 9
SF PS +GG
Sbjct: 257 SFQPSDVGG 265


>sp|EF1A_HALSA|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 700922

Query: 1 SFLPSALGG 9
SF PS +GG
Sbjct: 257 SFQPSDVGG 265


>sp|EF1A_HALS3|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 29341

Query: 1 SFLPSALGG 9
SF PS +GG
Sbjct: 257 SFQPSDVGG 265


>sp|Y1181_METJA|UNCHARACTERIZED protein MJ1181|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LPSALGG 9
LPSA GG
Sbjct: 72 LPSATGG 78


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 1 SFLPSALGG 9
+F+P A+GG
Sbjct: 81 AFVPFAVGG 89


>sp|FLAJ_METJA|FLAGELLA accessory protein J|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FLPSALGGF 10
F P A+GGF
Sbjct: 311 FTPLAIGGF 319


>sp|AMZA_PYRHO|ARCHAEMETZINCIN horikoshii (strain ATCC 700860

Query: 1 SFLPSALGGF 10
SFL + LGGF
Sbjct: 19 SFLQNFLGGF 28




73|Sequence|361|370|ALGGFYMFLT

>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ALGGFYMFL 9
A+G FY FL
Sbjct: 248 AIGAFYEFL 256


>sp|AAT_SACS2|ASPARTATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GGFYMF 8
G FYMF
Sbjct: 324 GAFYMF 329


>sp|AAT_THEKO|ASPARTATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GGFYMFL 9
G FY+FL
Sbjct: 280 GAFYIFL 286


>sp|AAT_SULAC|ASPARTATE aminotransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GGFYMF 8
G FYMF
Sbjct: 323 GAFYMF 328


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 3 GGFYMFL 9
GG Y+FL
Sbjct: 128 GGLYIFL 134


>sp|AAT_SULTO|ASPARTATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GGFYMF 8
G FYMF
Sbjct: 322 GAFYMF 327


>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ALGGFYM 7
++GGFY+
Sbjct: 382 SIGGFYL 388


>sp|THIDN_METJA|BIFUNCTIONAL thiamine biosynthesis protein ThiDN|Methanocaldococcus jannaschii

Query: 2 LGGFYM 7
LGGFY+
Sbjct: 294 LGGFYI 299




74|Sequence|366|375|YMFLTMIILL

>sp|Y3125_METAC|UPF0228 protein MA_3125|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 MFLTMIILL 10
+FLT+++LL
Sbjct: 12 VFLTLVVLL 20


>sp|COXX_THEVO|PROTOHEME IX farnesyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 MFLTMIILL 10
MFL++IILL
Sbjct: 98 MFLSIIILL 106


>sp|DIPPS_THEKO|BIFUNCTIONAL IPC transferase and DIPP|Thermococcus kodakarensis (strain ATCC

Query: 2 MFLTMIILL 10
+FLTM+ LL
Sbjct: 385 VFLTMLFLL 393




75|Sequence|371|380|MIILLQVLIP

***** No hits found ******


76|Sequence|376|385|QVLIPISLYV

>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QVLIPISLY 9
Q+L+P S+Y
Sbjct: 1061 QILMPSSIY 1069


>sp|TRUD_SACS2|PROBABLE tRNA pseudouridine synthase D|Saccharolobus solfataricus (strain

Query: 3 LIPISLYV 10
IPISLY+
Sbjct: 255 FIPISLYL 262


>sp|Y1317_METJA|UNCHARACTERIZED MFS-type transporter MJ1317|Methanocaldococcus jannaschii (strain

Query: 2 VLIPISLYV 10
++IPI+LY+
Sbjct: 259 IIIPIALYI 267




77|Sequence|381|390|ISLYVSIELV

***** No hits found ******


78|Sequence|386|395|SIELVKLGQV

>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 ELVKLGQV 10
E+VKLG+V
Sbjct: 570 EVVKLGEV 577


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 2 IELVKLGQ 9
+EL+KLG+
Sbjct: 191 VELMKLGE 198


>sp|HMGCS_PYRAR|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SIELVKLGQV 10
+I LVK GQV
Sbjct: 123 AIGLVKAGQV 132


>sp|Y1266_ARCFU|UNCHARACTERIZED protein AF_1266|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SIELVKLGQV 10
++ELVK+G V
Sbjct: 149 AVELVKMGAV 158


>sp|Y089_SULAC|MEMO1 family protein Saci_0089|Sulfolobus acidocaldarius (strain ATCC

Query: 1 SIELVKLGQV 10
S+ELVKL ++
Sbjct: 118 SLELVKLTEI 127


>sp|Y1143_METST|PUTATIVE HTH-type transcriptional regulatory protein|Methanosphaera

Query: 2 IELVKLG 8
IEL+KLG
Sbjct: 211 IELIKLG 217


>sp|ARGJ_METMA|GLUTAMATE N-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IELVKLGQV 10
+ELVK G++
Sbjct: 336 VELVKAGEI 344




79|Sequence|391|400|KLGQVFFLSN

>sp|FLAB2_ARCFU|PROBABLE flagellin 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KLGQVFF 7
K+GQV+F
Sbjct: 88 KVGQVYF 94


>sp|BIOW_METSF|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus sp. (strain FS406-22)

Query: 3 GQVFFLSN 10
G+VFF+ N
Sbjct: 207 GRVFFVKN 214


>sp|BIOW_META3|6-CARBOXYHEXANOATE--COA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GQVFFLSN 10
G+VFF+ N
Sbjct: 210 GRVFFVKN 217


>sp|BIOW_METVS|6-CARBOXYHEXANOATE--COA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GQVFFLSN 10
G+VFF+ N
Sbjct: 219 GRVFFIEN 226


>sp|BIOW_METM5|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 GQVFFLSN 10
G+VFF+ N
Sbjct: 219 GRVFFVEN 226


>sp|BIOW_METM7|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 GQVFFLSN 10
G+VFF+ N
Sbjct: 219 GRVFFVEN 226


>sp|BIOW_METM6|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 GQVFFLSN 10
G+VFF+ N
Sbjct: 219 GRVFFVEN 226




80|Sequence|396|405|FFLSNDLDLY

>sp|DNAG_METTH|DNA primase DnaG|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 FLSNDLDL 9
LSNDLDL
Sbjct: 39 LLSNDLDL 46


>sp|DNAG_METS3|DNA primase DnaG|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 FLSNDLDL 9
LSNDLDL
Sbjct: 40 LLSNDLDL 47


>sp|SPSS_METMJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FFLSNDL 7
FFLS+DL
Sbjct: 339 FFLSSDL 345


>sp|TRMY_METLZ|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocorpusculum

Query: 1 FFLSNDL 7
FFLS+DL
Sbjct: 40 FFLSHDL 46


>sp|RS13_PICTO|SMALL ribosomal subunit protein uS13|Picrophilus torridus (strain ATCC

Query: 2 FLSNDLDL 9
+SNDLDL
Sbjct: 100 LVSNDLDL 107


>sp|TRMY_NATPD|TRNA (pseudouridine(54)-N(1))-methyltransferase|Natronomonas pharaonis

Query: 1 FFLSNDL 7
FFLS+DL
Sbjct: 40 FFLSHDL 46


>sp|DNAG_METMP|DNA primase DnaG|Methanococcus maripaludis (strain DSM 14266

Query: 2 FLSNDLDL 9
LSN+LDL
Sbjct: 36 LLSNELDL 43


>sp|DNAG_METM7|DNA primase DnaG|Methanococcus maripaludis (strain C7 /

Query: 2 FLSNDLDL 9
LSN+LDL
Sbjct: 36 LLSNELDL 43


>sp|DNAG_METM6|DNA primase DnaG|Methanococcus maripaludis (strain C6 /

Query: 2 FLSNDLDL 9
LSN+LDL
Sbjct: 36 LLSNELDL 43


>sp|DNAG_METM5|DNA primase DnaG|Methanococcus maripaludis (strain C5 /

Query: 2 FLSNDLDL 9
LSN+LDL
Sbjct: 36 LLSNELDL 43


>sp|KHSE_METVS|HOMOSERINE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 4 SNDLDLY 10
+NDLDL+
Sbjct: 213 NNDLDLF 219


>sp|KHSE_METMP|HOMOSERINE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 4 SNDLDLY 10
+NDLDL+
Sbjct: 212 NNDLDLF 218


>sp|TRMY_META3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus aeolicus

Query: 1 FFLSNDL 7
FFLS+DL
Sbjct: 40 FFLSHDL 46




81|Sequence|401|410|DLDLYDEETD

>sp|DGGGP_HYPBU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Hyperthermus butylicus (strain DSM 5456

Query: 3 DLYDEETD 10
D YD ETD
Sbjct: 67 DYYDIETD 74


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 4 LYDEETD 10
LY++ETD
Sbjct: 118 LYEQETD 124


>sp|ABLA_METMA|L-LYSINE 2,3-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LYDEETD 10
LYDEE D
Sbjct: 398 LYDEEND 404


>sp|GVPN_HALMT|GAS vesicle ATPase GvpN|Haloferax mediterranei (strain ATCC 33500

Query: 2 LDLYDEETD 10
LD YD ET+
Sbjct: 245 LDFYDRETE 253


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LDLYDE 7
+DLYDE
Sbjct: 8 IDLYDE 13


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 1 DLDLYDEET 9
++DLYD ET
Sbjct: 183 EVDLYDSET 191


>sp|Y1126_METTH|UNCHARACTERIZED protein MTH_1126|Methanothermobacter thermautotrophicus (strain

Query: 1 DLDLYDEET 9
DL+L+DE T
Sbjct: 274 DLNLFDEVT 282


>sp|DADD_METM5|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C5 /

Query: 2 LDLYDEE 8
+DL+DEE
Sbjct: 141 IDLFDEE 147


>sp|MTAD_HALWD|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DLDLYDEETD 10
DLD++DE D
Sbjct: 318 DLDMFDELRD 327


>sp|DADD_METMP|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LDLYDEE 8
+DL+DEE
Sbjct: 141 IDLFDEE 147


>sp|DADD_METM7|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C7 /

Query: 2 LDLYDEE 8
+DL+DEE
Sbjct: 141 IDLFDEE 147


>sp|DADD_METM6|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C6 /

Query: 2 LDLYDEE 8
+DL+DEE
Sbjct: 141 IDLFDEE 147


>sp|DADD_METJA|5'-DEOXYADENOSINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LDLYDEE 8
+DL+DEE
Sbjct: 139 IDLFDEE 145


>sp|DADD_META3|5'-DEOXYADENOSINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LDLYDEE 8
+DL+DEE
Sbjct: 143 IDLFDEE 149


>sp|MTAD_HALMA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DLDLYDEETD 10
DLD++DE D
Sbjct: 306 DLDMFDEMRD 315


>sp|MDH_NITMS|MALATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DLDLYDEE 8
+LDL DEE
Sbjct: 277 ELDLNDEE 284




82|Sequence|406|415|DEETDLSIQC

>sp|IF2A_METS3|TRANSLATION initiation factor 2 subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 DEETDLSIQC 10
DEE ++ +QC
Sbjct: 208 DEEEEIKVQC 217




83|Sequence|411|420|LSIQCRALNI

>sp|GLFT_PICTO|GLUTAMATE formimidoyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 LSIQCRALNI 10
LSI+CR N+
Sbjct: 252 LSIECRRYNV 261


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSIQCRALNI 10
L C+ALNI
Sbjct: 496 LKAVCKALNI 505




84|Sequence|416|425|RALNIAEDLG

>sp|RRP4_SACS2|EXOSOME complex component Rrp4|Saccharolobus solfataricus (strain ATCC

Query: 1 RALNIAEDL 9
R++N+ EDL
Sbjct: 108 RSINVGEDL 116


>sp|MOAA_AERPE|PROBABLE GTP 3',8-cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RALNIAEDLG 10
R L +AEDLG
Sbjct: 173 RLLRLAEDLG 182


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 RALNIAEDL 9
R++N+AED+
Sbjct: 635 RSMNLAEDV 643


>sp|HDRB_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 1 RALNIAEDLG 10
R + IAED+G
Sbjct: 62 RNITIAEDMG 71


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RALNIAEDL 9
+A+NIAE L
Sbjct: 290 KAMNIAETL 298


>sp|NADE_ARCFU|NH(3)-DEPENDENT NAD(+) synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ALNIAEDLG 10
A+N+AE LG
Sbjct: 71 AINVAESLG 79


>sp|RBL_METBF|RIBULOSE bisphosphate carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RALNIAEDLG 10
R +NI +DLG
Sbjct: 228 RRMNILKDLG 237


>sp|GLNA3_HALMT|GLUTAMINE synthetase 3|Haloferax mediterranei (strain ATCC 33500

Query: 1 RALNIAEDLG 10
RA+ AED+G
Sbjct: 126 RAIERAEDMG 135


>sp|PYRF_METTH|OROTIDINE 5'-phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 3 LNIAEDLG 10
LN+AE++G
Sbjct: 110 LNVAEEMG 117


>sp|FDHD_SULAC|SULFUR carrier protein FdhD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RALNIAEDLG 10
+A+ IAED G
Sbjct: 221 KAIEIAEDAG 230


>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 NIAEDLG 10
N+A+DLG
Sbjct: 450 NVAKDLG 456


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RALNIAEDL 9
R +N+AED+
Sbjct: 355 RKMNLAEDV 363


>sp|NPPNK_METMP|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanococcus maripaludis (strain DSM

Query: 2 ALNIAEDL 9
ALNIA+D+
Sbjct: 7 ALNIAKDI 14


>sp|DNLI_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RALNIAEDLG 10
RAL +A D G
Sbjct: 195 RALQVANDCG 204


>sp|CS3HE_THETK|CRISPR-ASSOCIATED helicase Cas3|Thermoproteus tenax (strain ATCC 35583

Query: 3 LNIAEDLG 10
LN+AED G
Sbjct: 114 LNVAEDHG 121


>sp|CARB2_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 2 ALNIAEDLG 10
A+ +AED+G
Sbjct: 144 AVEVAEDIG 152


>sp|Y1318_METJA|UNCHARACTERIZED protein MJ1318|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LNIAEDLG 10
+N+AE+LG
Sbjct: 495 INLAENLG 502




85|Sequence|421|430|AEDLGQIQYI

>sp|RL3_METS3|LARGE ribosomal subunit protein uL3|Methanobrevibacter smithii (strain

Query: 1 AEDLGQIQYI 10
+ED+ QI YI
Sbjct: 319 SEDMPQINYI 328


>sp|COFC_METTH|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 AEDLGQI 7
AEDLG+I
Sbjct: 182 AEDLGEI 188


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 2 EDLGQIQYI 10
ED+G+++YI
Sbjct: 553 EDIGRMKYI 561


>sp|DPCKG_SULAC|GTP-DEPENDENT dephospho-CoA kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EDLGQIQYI 10
E+ GQ +YI
Sbjct: 69 ENFGQFEYI 77


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 DLGQIQYI 10
DLG+++YI
Sbjct: 553 DLGKMKYI 560


>sp|PURA_METMP|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 1 AEDLGQIQY 9
AE+LG ++Y
Sbjct: 242 AENLGVVEY 250




86|Sequence|426|435|QIQYIFSDKT

>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QIQYIFSDKT 10
++QY++ DKT
Sbjct: 113 EVQYVYKDKT 122


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QIQYIFSDKT 10
++QY++ D+T
Sbjct: 111 EVQYVYKDRT 120


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 IQYIFSDKT 10
+QY++ DKT
Sbjct: 106 VQYVYKDKT 114


>sp|HTPX2_METAC|PROTEASE HtpX homolog 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IQYIFSDK 9
IQY +SDK
Sbjct: 53 IQYFYSDK 60


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 IQYIFSDKT 10
++Y++ DKT
Sbjct: 114 VEYVYKDKT 122


>sp|HTPX2_METMA|PROTEASE HtpX homolog 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 QYIFSDK 9
QY +SDK
Sbjct: 54 QYFYSDK 60




87|Sequence|431|440|FSDKTGTLTE

>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 2 SDKTGTLTE 10
SDKTGTLT+
Sbjct: 310 SDKTGTLTK 318


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DKTGTLTE 10
DKTGTLTE
Sbjct: 389 DKTGTLTE 396


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 3 DKTGTLTE 10
DKTGTLT+
Sbjct: 424 DKTGTLTK 431


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 DKTGTLTE 10
DKTG LTE
Sbjct: 251 DKTGCLTE 258


>sp|PURQ_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus abyssi (strain GE5 /

Query: 1 FSDKTGTLTE 10
+SD+ G LTE
Sbjct: 160 YSDENGNLTE 169


>sp|YIH50_HALSA|UNCHARACTERIZED protein in transposable element|Halobacterium salinarum (strain

Query: 1 FSDKTGTLTE 10
F+D+TGT+ E
Sbjct: 57 FNDQTGTVFE 66


>sp|PURQ_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FSDKTGTLTE 10
+SD+ G++TE
Sbjct: 160 YSDEKGSITE 169


>sp|PURQ_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FSDKTGTLTE 10
+SD+ G++TE
Sbjct: 160 YSDEKGSITE 169


>sp|KATG_HALSA|CATALASE-PEROXIDASE salinarum (strain ATCC 700922

Query: 1 FSDKTGTLT 9
F+D+ GTLT
Sbjct: 625 FTDQPGTLT 633


>sp|KATG_HALS3|CATALASE-PEROXIDASE salinarum (strain ATCC 29341

Query: 1 FSDKTGTLT 9
F+D+ GTLT
Sbjct: 625 FTDQPGTLT 633


>sp|PURQ_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermococcus kodakarensis (strain ATCC

Query: 1 FSDKTGTLTE 10
+SD+ G +TE
Sbjct: 160 YSDEEGNITE 169


>sp|KDPB_THEAC|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 DKTGTLT 9
DKTGT+T
Sbjct: 295 DKTGTIT 301


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 3 DKTGTLT 9
DKTGT+T
Sbjct: 298 DKTGTIT 304


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 FSDKTGTLT 9
F+D+ GTLT
Sbjct: 635 FTDEPGTLT 643


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 1 FSDKTGTLT 9
F+D+ GTLT
Sbjct: 618 FTDEPGTLT 626


>sp|PURQ_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FSDKTGTLTE 10
+ D+TG +TE
Sbjct: 166 YCDETGEVTE 175


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 3 DKTGTLT 9
DKTGT+T
Sbjct: 318 DKTGTIT 324


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 3 DKTGTLT 9
DKTGT+T
Sbjct: 318 DKTGTIT 324


>sp|UVRC_METHJ|UVRABC system protein C|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FSDKTGTL 8
F D+TGT+
Sbjct: 18 FKDETGTI 25




88|Sequence|436|445|GTLTENKMVF

>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 GTLTENKMV 9
GTLT+N++V
Sbjct: 314 GTLTKNQLV 322


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 GTLTENKMV 9
GTL ENK V
Sbjct: 844 GTLAENKRV 852


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 GTLTENKMV 9
GTL ENK V
Sbjct: 810 GTLAENKRV 818


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 GTLTENKMV 9
GTL ENK V
Sbjct: 841 GTLAENKRV 849


>sp|AMPPA_METHJ|AMP phosphorylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 TLTENKMV 9
TLTEN++V
Sbjct: 71 TLTENEVV 78


>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 1 GTLTENKMV 9
GTLTE++++
Sbjct: 124 GTLTESELL 132




89|Sequence|441|450|NKMVFRRCTI

>sp|ACDE_METKA|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanopyrus

Query: 2 KMVFRR 7
KMVFRR
Sbjct: 24 KMVFRR 29


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KMVFRRCTI 10
K +F RC+I
Sbjct: 665 KKLFERCSI 673




90|Sequence|446|455|RRCTIMGSEY

>sp|GSA_SACI7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 RCTIMGSE 9
RCTI+ SE
Sbjct: 5 RCTILNSE 12


>sp|GSA_SACI6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 RCTIMGSE 9
RCTI+ SE
Sbjct: 5 RCTILNSE 12


>sp|GSA_SACI4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 RCTIMGSE 9
RCTI+ SE
Sbjct: 5 RCTILNSE 12


>sp|GSA_SACI3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.27)

Query: 2 RCTIMGSE 9
RCTI+ SE
Sbjct: 5 RCTILNSE 12


>sp|GSA_SACI2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 RCTIMGSE 9
RCTI+ SE
Sbjct: 5 RCTILNSE 12


>sp|GSA_SACI1|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 RCTIMGSE 9
RCTI+ SE
Sbjct: 5 RCTILNSE 12


>sp|Y1566_ARCFU|UNCHARACTERIZED protein AF_1566|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RCTIMGSEY 10
+C+++G EY
Sbjct: 154 QCSVLGDEY 162


>sp|Y002_METMP|UPF0425 pyridoxal phosphate-dependent protein MMP0002|Methanococcus

Query: 1 RRCTIMGSEY 10
R C I G EY
Sbjct: 118 RSCKIFGMEY 127


>sp|PURE_METJA|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide mutase|Methanocaldococcus jannaschii (strain

Query: 3 CTIMGSE 9
C IMGSE
Sbjct: 3 CIIMGSE 9


>sp|ARGX_SULAC|GLUTAMATE--LYSW ligase ArgX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RCTIMGSE 9
RC ++GSE
Sbjct: 178 RCIVIGSE 185


>sp|THIL_HALSA|THIAMINE-MONOPHOSPHATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 CTIMGSEY 10
CT +G+EY
Sbjct: 96 CTAVGAEY 103


>sp|SPSS2_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 CTIMGS 8
CT+MGS
Sbjct: 323 CTLMGS 328


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 CTIMGSEY 10
C++M S+Y
Sbjct: 206 CSVMSSKY 213


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 CTIMGSEY 10
C++M S+Y
Sbjct: 209 CSVMSSKY 216


>sp|SYC_NANEQ|CYSTEINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 CTIMGSEY 10
C++M S+Y
Sbjct: 207 CSVMSSKY 214


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 CTIMGSEY 10
C++M S+Y
Sbjct: 209 CSVMSSKY 216


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CTIMGSEY 10
C++M S+Y
Sbjct: 208 CSVMSSKY 215


>sp|KCY_PYRIL|CYTIDYLATE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 CTIMGSEY 10
CT++G +Y
Sbjct: 172 CTVLGFKY 179


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RCTIMGSE 9
RC + GSE
Sbjct: 172 RCMVCGSE 179




91|Sequence|451|460|MGSEYSHQEN

>sp|PANB_PYRAR|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GSEYSH 7
GSEY+H
Sbjct: 116 GSEYAH 121


>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MGSEYSHQEN 10
+GS HQEN
Sbjct: 154 LGSRAIHQEN 163


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SEYSHQEN 10
+EY HQE+
Sbjct: 188 AEYRHQEH 195


>sp|DKFP_METJA|FRUCTOSE-BISPHOSPHATE aldolase/6-deoxy-5-ketofructose 1-phosphate

Query: 2 GSEYSH 7
GSEY H
Sbjct: 152 GSEYEH 157


>sp|PANB_NATPD|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GSEYSHQEN 10
G E+SH E+
Sbjct: 254 GDEHSHYED 262




92|Sequence|456|465|SHQENAKRLE

>sp|Y237_THEAC|MEMO1 family protein Ta0237|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SHQENAKRLE 10
+H E+AKR+E
Sbjct: 181 THYEDAKRVE 190


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HQENAKRLE 10
H+E+AK++E
Sbjct: 11 HKEHAKKIE 19


>sp|GCST_PYRAB|PROBABLE aminomethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 HQENAKRLE 10
H+E+AK++E
Sbjct: 11 HKEHAKKIE 19


>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 HQENAKRLE 10
H+E+AK++E
Sbjct: 11 HKEHAKKVE 19


>sp|AGLJ_HALVD|GLYCOSYLTRANSFERASE AglJ|Haloferax volcanii (strain ATCC 29605

Query: 2 HQENAKRLE 10
H+E KR+E
Sbjct: 292 HREQMKRIE 300


>sp|GCST_THEGJ|PROBABLE aminomethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 2 HQENAKRLE 10
H+E+AK++E
Sbjct: 11 HKEHAKKVE 19




93|Sequence|461|470|AKRLETPKEL

>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 1 AKRLETPKEL 10
A+R+E+P E+
Sbjct: 522 ARRIESPNEI 531


>sp|PMDHL_AERPE|PHOSPHOMEVALONATE dehydratase large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 AKRLETPKEL 10
A RLETPK L
Sbjct: 193 AYRLETPKVL 202


>sp|METE_SULTO|METHIONINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KRLETPKEL 10
KR+ETP+E+
Sbjct: 264 KRIETPEEV 272


>sp|PCNA_THEAC|DNA polymerase sliding clamp|Thermoplasma acidophilum (strain ATCC

Query: 3 RLETPKE 9
RLE PKE
Sbjct: 48 RLEVPKE 54


>sp|KDGK1_HALVD|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE volcanii (strain ATCC 29605

Query: 1 AKRLETPKEL 10
+RLET +EL
Sbjct: 19 GERLETAREL 28


>sp|RL18E_METMA|LARGE ribosomal subunit protein eL18|Methanosarcina mazei (strain ATCC

Query: 1 AKRLETP 7
AKRLE P
Sbjct: 40 AKRLEAP 46


>sp|RL18E_METAC|LARGE ribosomal subunit protein eL18|Methanosarcina acetivorans (strain

Query: 1 AKRLETP 7
AKRLE P
Sbjct: 40 AKRLEAP 46


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 KRLETPKEL 10
KR E+PK+L
Sbjct: 67 KRGESPKDL 75


>sp|PCNA_THEVO|DNA polymerase sliding clamp|Thermoplasma volcanium (strain ATCC

Query: 3 RLETPKEL 10
RLE PKE+
Sbjct: 48 RLEVPKEV 55


>sp|OGT_METMA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AKRLETPK 8
AKR++ PK
Sbjct: 99 AKRIQNPK 106




94|Sequence|466|475|TPKELDSDGE

>sp|RNP1_METVS|RIBONUCLEASE P protein component 1|Methanococcus vannielii (strain ATCC 35089

Query: 1 TPKELDSDGE 10
TPK++D DG
Sbjct: 70 TPKKVDIDGR 79


>sp|RNP1_METVA|RIBONUCLEASE P protein component 1|Methanococcus vannielii

Query: 1 TPKELDSDGE 10
TPK++D DG
Sbjct: 70 TPKKVDIDGR 79


>sp|Y978_METJA|UNCHARACTERIZED protein MJ0978|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KELDSDGE 10
KELD DG+
Sbjct: 59 KELDEDGK 66


>sp|ECFA_METMP|ENERGY-COUPLING factor transporter ATP-binding protein|Methanococcus maripaludis

Query: 1 TPKELDSDGE 10
TP+E+ SD E
Sbjct: 222 TPREIFSDSE 231


>sp|Y1402_METJA|UNCHARACTERIZED protein MJ1402|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PKELDSDGE 10
PKE+D +G+
Sbjct: 69 PKEIDVEGD 77


>sp|WTPA_METJA|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PKELDSD 8
PKELD D
Sbjct: 205 PKELDVD 211


>sp|DPCKG_METTP|GTP-DEPENDENT dephospho-CoA kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 TPKELDSDGE 10
TP E+ DGE
Sbjct: 116 TPTEIIVDGE 125


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PKELDSDGE 10
P EL SD E
Sbjct: 540 PNELKSDAE 548


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 TPKELDSDGE 10
P+EL+ DG+
Sbjct: 785 VPEELEVDGQ 794




95|Sequence|471|480|DSDGEEWTQY

>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 4 GEEWTQY 10
GEEW +Y
Sbjct: 152 GEEWKEY 158


>sp|KCY_METBF|CYTIDYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DGEEWTQY 10
D E+W QY
Sbjct: 156 DSEKWNQY 163


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 DSDGEEWT 8
D +G EWT
Sbjct: 528 DREGREWT 535


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 1 DSDGEEWTQY 10
D DG E T Y
Sbjct: 170 DEDGREITAY 179


>sp|NADM_ARCFU|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DGEEWTQY 10
+GE+W +Y
Sbjct: 141 EGEDWEKY 148


>sp|KCY_METMA|CYTIDYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DGEEWTQY 10
D E+W QY
Sbjct: 156 DSEKWNQY 163


>sp|KCY_METAC|CYTIDYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DGEEWTQY 10
D E+W QY
Sbjct: 156 DSEKWNQY 163


>sp|Y009_METJA|UNCHARACTERIZED protein MJ0009|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GEEWTQ 9
GEEW Q
Sbjct: 210 GEEWEQ 215


>sp|GSA_METVS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DSDGEEWTQY 10
D DG E+ Y
Sbjct: 49 DEDGNEFIDY 58


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DSDGEEWTQY 10
D DG E+ Y
Sbjct: 49 DEDGNEFIDY 58


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 1 DSDGEEWTQY 10
D DG E+ Y
Sbjct: 49 DEDGNEFIDY 58


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 1 DSDGEEWTQY 10
D DG E+ Y
Sbjct: 49 DEDGNEFIDY 58


>sp|PHAE_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaE|Haloferax mediterranei (strain ATCC 33500

Query: 4 GEEWTQY 10
G+EWT Y
Sbjct: 6 GDEWTMY 12


>sp|GSA_METM5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C5 /

Query: 1 DSDGEEWTQY 10
D DG E+ Y
Sbjct: 49 DEDGNEFIDY 58


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DSDGEEW 7
+ DG EW
Sbjct: 1036 EKDGREW 1042


>sp|DNLI_SULAC|DNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SDGEEWTQ 9
+DGE++TQ
Sbjct: 355 NDGEDYTQ 362


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 3 DGEEWTQY 10
+GEE+T Y
Sbjct: 239 EGEEYTLY 246


>sp|RPO1C_METAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina acetivorans (strain

Query: 3 DGEEWTQY 10
+GEE+T Y
Sbjct: 236 EGEEYTLY 243


>sp|Y021_PYRIL|UPF0282 protein Pisl_0021|Pyrobaculum islandicum (strain DSM 4184

Query: 2 SDGEEWT 8
+DG EWT
Sbjct: 137 ADGGEWT 143


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 3 DGEEWTQ 9
+GEE+TQ
Sbjct: 324 EGEEYTQ 330


>sp|XACK_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacK|Haloferax volcanii (strain ATCC

Query: 3 DGEEWTQY 10
DG+E TQ+
Sbjct: 323 DGDEGTQF 330




96|Sequence|476|485|EWTQYQCLSF

>sp|KCY_METMA|CYTIDYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EWTQYQCL 8
+W QYQ L
Sbjct: 159 KWNQYQTL 166


>sp|KCY_METAC|CYTIDYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EWTQYQCL 8
+W QYQ L
Sbjct: 159 KWNQYQTL 166


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 EWTQYQCLSF 10
+W +Q LSF
Sbjct: 553 DWDPFQALSF 562


>sp|KCY_METBF|CYTIDYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EWTQYQCL 8
+W QYQ L
Sbjct: 159 KWNQYQIL 166




97|Sequence|481|490|QCLSFSARWA

>sp|GLYA_META3|SERINE hydroxymethyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 QCLSFSAR 8
+C+ FSAR
Sbjct: 323 ECIEFSAR 330


>sp|TRUA_METTP|TRNA pseudouridine synthase A|Methanothrix thermoacetophila (strain DSM

Query: 3 LSFSARWA 10
+ FSARW+
Sbjct: 96 VGFSARWS 103




98|Sequence|486|495|SARWAQDPAT

>sp|AHBC_METBF|FE-COPROPORPHYRIN III synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 WAQDPA 9
WA DPA
Sbjct: 381 WADDPA 386


>sp|RNZ_HALVD|RIBONUCLEASE Z|Haloferax volcanii (strain ATCC 29605

Query: 1 SARWAQDPA 9
SAR+A DP+
Sbjct: 270 SARYAADPS 278


>sp|YHIT_SACS2|UNCHARACTERIZED HIT-like protein SSO2163|Saccharolobus solfataricus (strain ATCC

Query: 4 WAQDP 8
W+QDP
Sbjct: 104 WSQDP 108


>sp|SECD_HALWD|PROTEIN-EXPORT membrane protein SecD|Haloquadratum walsbyi (strain DSM 16790

Query: 4 WAQDPA 9
WAQDP
Sbjct: 308 WAQDPV 313


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 ARWAQDPAT 10
A W+ +PAT
Sbjct: 370 ATWSVNPAT 378


>sp|AROK_HALSA|SHIKIMATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SARWAQDPAT 10
S RW ++P T
Sbjct: 261 STRWHENPGT 270


>sp|AROK_HALS3|SHIKIMATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 SARWAQDPAT 10
S RW ++P T
Sbjct: 261 STRWHENPGT 270


>sp|RL15E_SULTO|LARGE ribosomal subunit protein eL15|Sulfurisphaera tokodaii (strain DSM

Query: 3 RWAQDPA 9
+W QDPA
Sbjct: 146 KWLQDPA 152


>sp|HIS8_HALVD|HISTIDINOL-PHOSPHATE aminotransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 SARWAQD 7
SARW++D
Sbjct: 277 SARWSRD 283




99|Sequence|491|500|QDPATMRSQK

>sp|ADEC_CENSY|ADENINE deaminase|Cenarchaeum symbiosum (strain A)

Query: 1 QDPATMRS 8
+DP TMRS
Sbjct: 187 RDPGTMRS 194


>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 QDPATMR 7
QDP TMR
Sbjct: 391 QDPDTMR 397




100|Sequence|496|505|MRSQKGAQPL

>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 MRSQKGAQP 9
M+SQ+GA P
Sbjct: 383 MKSQRGALP 391


>sp|COBQ_METTH|PROBABLE cobyric acid synthase|Methanothermobacter thermautotrophicus

Query: 1 MRSQKGAQPL 10
+R +KG +PL
Sbjct: 458 LRERKGIEPL 467


>sp|COBQ_THEON|PROBABLE cobyric acid synthase|Thermococcus onnurineus (strain NA1)

Query: 1 MRSQKGAQPL 10
+R++KG +P+
Sbjct: 441 LRAEKGLEPI 450




101|Sequence|501|510|GAQPLRRSQS

>sp|GLNK2_HALMT|NITROGEN regulatory protein GlnK2|Haloferax mediterranei (strain ATCC

Query: 1 GAQPLRRSQ 9
G+QP ++SQ
Sbjct: 48 GSQPAKKSQ 56




102|Sequence|506|515|RRSQSARVPI

>sp|HMDH_ARCFU|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RRSQSARVP 9
RR+ S+R+P
Sbjct: 17 RRAMSSRIP 25




103|Sequence|511|520|ARVPIQGHYR

>sp|PURO_METTH|IMP cyclohydrolase|Methanothermobacter thermautotrophicus (strain

Query: 1 ARVPIQGHYR 10
A VP++GH R
Sbjct: 40 AVVPVEGHER 49


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 1 ARVPIQGHY 9
A+VP++G+Y
Sbjct: 596 AKVPLRGNY 604


>sp|SECY_METJA|PROTEIN translocase subunit SecY|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VPIQGHY 9
+PI GHY
Sbjct: 281 IPILGHY 287


>sp|Y891_STAMF|UPF0173 metal-dependent hydrolase Smar_0891|Staphylothermus marinus (strain

Query: 1 ARVPIQGHY 9
A +PI GHY
Sbjct: 159 ALLPIGGHY 167


>sp|Y1254_IGNH4|UPF0173 metal-dependent hydrolase Igni_1254|Ignicoccus hospitalis (strain

Query: 1 ARVPIQGHY 9
A +PI GHY
Sbjct: 163 ALLPIGGHY 171


>sp|Y764_THEAC|UPF0173 metal-dependent hydrolase Ta0764|Thermoplasma acidophilum (strain

Query: 1 ARVPIQGHY 9
A +PI GHY
Sbjct: 157 ALLPIGGHY 165


>sp|Y1118_PICTO|UPF0173 metal-dependent hydrolase PTO1118|Picrophilus torridus (strain ATCC

Query: 3 VPIQGHY 9
+PI GHY
Sbjct: 155 LPIGGHY 161


>sp|Y886_HYPBU|UPF0173 metal-dependent hydrolase Hbut_0886|Hyperthermus butylicus (strain

Query: 1 ARVPIQGHY 9
A VPI GH+
Sbjct: 160 ALVPIGGHF 168


>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 VPIQGHYR 10
+PI+GH R
Sbjct: 56 LPIEGHLR 63


>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 PIQGHY 9
P++GHY
Sbjct: 148 PLEGHY 153


>sp|SYS_STAMF|SERINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 ARVPIQGHYR 10
A +P QG YR
Sbjct: 362 AWMPAQGRYR 371


>sp|Y864_THEVO|UPF0173 metal-dependent hydrolase TV0864|Thermoplasma volcanium (strain

Query: 3 VPIQGHY 9
+PI GHY
Sbjct: 158 LPIGGHY 164


>sp|TRUA_METTH|TRNA pseudouridine synthase A|Methanothermobacter thermautotrophicus

Query: 2 RVPIQGHYR 10
R P++ HYR
Sbjct: 102 RYPLERHYR 110


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VPIQGHY 9
+PIQG Y
Sbjct: 508 LPIQGRY 514


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ARVPIQGHYR 10
A +P QG YR
Sbjct: 363 AWMPAQGKYR 372


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 2 RVPIQGHYR 10
R P+ HYR
Sbjct: 372 RFPVYTHYR 380




104|Sequence|516|525|QGHYRQRSMG

>sp|CPKA_THEKO|CARBAMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QGHYRQRSMG 10
+GH+++ SMG
Sbjct: 266 EGHFKKGSMG 275


>sp|RLME_META3|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus aeolicus

Query: 1 QGHYRQRS 8
Q HYR R+
Sbjct: 23 QNHYRSRA 30


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus (strain

Query: 2 GHYRQRSMG 10
GH + RSMG
Sbjct: 173 GHLKYRSMG 181


>sp|CPKA_PYRAB|CARBAMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 QGHYRQRSMG 10
+GH++ SMG
Sbjct: 266 EGHFKAGSMG 275


>sp|CPKA_PYRHO|CARBAMATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QGHYRQRSMG 10
+GH++ SMG
Sbjct: 266 EGHFKAGSMG 275


>sp|CPKA_PYRFU|CARBAMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QGHYRQRSMG 10
+GH++ SMG
Sbjct: 266 EGHFKAGSMG 275


>sp|RS4_METAC|SMALL ribosomal subunit protein uS4|Methanosarcina acetivorans (strain

Query: 1 QGHYRQRS 8
+GHYR +S
Sbjct: 71 EGHYRTQS 78




105|Sequence|521|530|QRSMGHRESS

>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 4 MGHRES 9
MGHRES
Sbjct: 387 MGHRES 392




106|Sequence|526|535|HRESSQPPVA

>sp|SPSS_METAC|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RESSQPPV 9
+ES +PPV
Sbjct: 155 KESGKPPV 162


>sp|WTPA_PYRFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HRESSQPPVA 10
H++ +PP+A
Sbjct: 320 HQDFLEPPIA 329


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HRESSQPP 8
H+E +PP
Sbjct: 190 HKEHDEPP 197




107|Sequence|531|540|QPPVAFSSSI

>sp|IF2G_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 PPVAFS 7
PPVAFS
Sbjct: 318 PPVAFS 323


>sp|DHSD_THEAC|SUCCINATE dehydrogenase hydrophobic membrane anchor|Thermoplasma

Query: 3 PVAFSSSI 10
PVAF SS+
Sbjct: 42 PVAFFSSV 49


>sp|FLAA_METVO|FLAGELLIN A|Methanococcus voltae

Query: 2 PPVAFSSS 9
PPV++SS+
Sbjct: 109 PPVSYSST 116


>sp|HTR6_HALS3|TRANSDUCER protein Htr6|Halobacterium salinarum (strain ATCC 29341

Query: 1 QPPVAFSSSI 10
+P +AF+SS+
Sbjct: 178 EPVMAFASSV 187


>sp|WTPA_PYRFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QPPVAFSS 8
+PP+AF +
Sbjct: 325 EPPIAFGN 332




108|Sequence|536|545|FSSSIEKDVT

>sp|PSB2_SACI9|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain L.D.8.5 /

Query: 3 SSIEKDVT 10
+SIE+D+T
Sbjct: 166 ASIERDIT 173


>sp|PSB2_SACI7|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 SSIEKDVT 10
+SIE+D+T
Sbjct: 166 ASIERDIT 173


>sp|PSB2_SACI6|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.16.4 /

Query: 3 SSIEKDVT 10
+SIE+D+T
Sbjct: 166 ASIERDIT 173


>sp|PSB2_SACI4|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.14.25 /

Query: 3 SSIEKDVT 10
+SIE+D+T
Sbjct: 166 ASIERDIT 173


>sp|PSB2_SACI3|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.16.27)

Query: 3 SSIEKDVT 10
+SIE+D+T
Sbjct: 166 ASIERDIT 173


>sp|PSB2_SACI2|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 SSIEKDVT 10
+SIE+D+T
Sbjct: 166 ASIERDIT 173


>sp|PSB1_SACI1|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 SSIEKDVT 10
+SIE+D+T
Sbjct: 166 ASIERDIT 173


>sp|PSB1_SACS9|PROTEASOME subunit beta 1|Saccharolobus solfataricus (strain 98/2) (Sulfolobus

Query: 3 SSIEKDVT 10
+SIE+D+T
Sbjct: 166 ASIERDIT 173


>sp|PSB1_SACS2|PROTEASOME subunit beta 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 SSIEKDVT 10
+SIE+D+T
Sbjct: 166 ASIERDIT 173




109|Sequence|541|550|EKDVTPDKNL

>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DVTPDKNL 10
DV PD+NL
Sbjct: 210 DVQPDENL 217


>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KDVTPDKN 9
KD+ PD+N
Sbjct: 8 KDMYPDEN 15


>sp|CSG1_HALHT|CELL surface glycoprotein 1|Haloarcula hispanica (strain ATCC 33960

Query: 1 EKDVTPDKNL 10
++DV P++NL
Sbjct: 102 DQDVQPNRNL 111


>sp|CSG2_HALHT|CELL surface glycoprotein 2|Haloarcula hispanica (strain ATCC 33960

Query: 1 EKDVTPDKNL 10
++DV P++NL
Sbjct: 102 DQDVQPNRNL 111


>sp|Y452_PYRAB|UNCHARACTERIZED lipoprotein PYRAB04520|Pyrococcus abyssi (strain GE5 /

Query: 2 KDVTPDK 8
KD+TPD+
Sbjct: 332 KDMTPDE 338


>sp|Y1714_PYRHO|UNCHARACTERIZED lipoprotein PH1714|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KDVTPDK 8
KD+TPD+
Sbjct: 333 KDMTPDE 339


>sp|Y2246_METAC|UNCHARACTERIZED serpin-like protein MA_2246|Methanosarcina acetivorans (strain ATCC

Query: 4 VTPDKNL 10
+TPDK+L
Sbjct: 348 ITPDKSL 354


>sp|RL1_METBU|LARGE ribosomal subunit protein uL1|Methanococcoides burtonii (strain DSM

Query: 4 VTPDKNL 10
+TPDKN+
Sbjct: 134 LTPDKNV 140


>sp|Y962_METM5|UPF0285 protein MmarC5_0962|Methanococcus maripaludis (strain C5 /

Query: 4 VTPDKNL 10
+TPDKN+
Sbjct: 260 LTPDKNV 266


>sp|Y642_METMP|UPF0285 protein MMP0642|Methanococcus maripaludis (strain DSM 14266

Query: 4 VTPDKNL 10
+TPDKN+
Sbjct: 260 LTPDKNV 266




110|Sequence|546|555|PDKNLLTKVR

>sp|SYFA_PYRHO|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PDKNLLTKVR 10
PD+NL++KV+
Sbjct: 301 PDENLVSKVK 310


>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 2 DKNLLTKV 9
DKNLLT V
Sbjct: 268 DKNLLTPV 275


>sp|FLAB1_NATMM|FLAGELLIN B1|Natrialba magadii (strain ATCC 43099

Query: 1 PDKNLLTK 8
PD N+LT+
Sbjct: 132 PDNNVLTE 139


>sp|ARNR1_SULAC|HTH-TYPE transcriptional activator ArnR1|Sulfolobus acidocaldarius (strain

Query: 2 DKNLLTKVR 10
DK L+TKV+
Sbjct: 65 DKELVTKVK 73


>sp|SPCS_METMP|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DKNLLTKV 9
DKNLLT +
Sbjct: 277 DKNLLTPI 284


>sp|ARNR_SULAC|HTH-TYPE transcriptional activator ArnR|Sulfolobus acidocaldarius (strain

Query: 2 DKNLLTKVR 10
DK L+TKV+
Sbjct: 62 DKELVTKVK 70




111|Sequence|551|560|LTKVRDAALW

>sp|PSTB_HALWD|PHOSPHATE import ATP-binding protein PstB|Haloquadratum walsbyi (strain DSM

Query: 4 VRDAALW 10
+RDAALW
Sbjct: 183 LRDAALW 189


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VRDAALW 10
+RD +LW
Sbjct: 325 IRDGSLW 331


>sp|DNAK_CENSY|CHAPERONE protein DnaK|Cenarchaeum symbiosum (strain A)

Query: 1 LTKVRDAA 8
LT+VR+AA
Sbjct: 235 LTRVREAA 242


>sp|HYD2A_PYRFU|SULFHYDROGENASE 2 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KVRDAALW 10
K+R+ ALW
Sbjct: 89 KLRELALW 96




112|Sequence|556|565|DAALWLETLS

>sp|HIS4_METB6|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanoregula boonei (strain

Query: 1 DAALWLET 8
DAA WL+T
Sbjct: 87 DAARWLDT 94


>sp|PSTB_HALWD|PHOSPHATE import ATP-binding protein PstB|Haloquadratum walsbyi (strain DSM

Query: 1 DAALWLE 7
DAALW E
Sbjct: 185 DAALWDE 191


>sp|PSTB_METAC|PHOSPHATE import ATP-binding protein PstB|Methanosarcina acetivorans (strain

Query: 2 AALWLET 8
AALW ET
Sbjct: 138 AALWNET 144


>sp|COBD_AERPE|PROBABLE cobalamin biosynthesis protein CobD|Aeropyrum pernix (strain ATCC

Query: 1 DAALWLETLS 10
AA+WL T+S
Sbjct: 63 GAAIWLLTIS 72




113|Sequence|561|570|LETLSDSRPA

>sp|PXPA_THEKO|5-OXOPROLINASE subunit A|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 TLSDSRPA 10
TLS SRPA
Sbjct: 143 TLSGSRPA 150


>sp|T1SX_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 LETLSDSR 8
+ET+SDS+
Sbjct: 57 IETISDSK 64


>sp|BPSA_METJA|N(4)-BIS(AMINOPROPYL)SPERMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LETLSDSR 8
+ETL DSR
Sbjct: 322 IETLKDSR 329


>sp|AROA_CALMQ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 LETLSDS 7
LET+SDS
Sbjct: 329 LETISDS 335




114|Sequence|566|575|DSRPAKASLS

***** No hits found ******


115|Sequence|571|580|KASLSTTSSI

***** No hits found ******


116|Sequence|576|585|TTSSIADFFL

>sp|Y1015_HALLT|UPF0145 protein Hlac_1015|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 TTSSIAD 7
TTSSIAD
Sbjct: 83 TTSSIAD 89


>sp|NPD_PYRHO|NAD-DEPENDENT protein deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 SSIADFFL 10
+ IADFFL
Sbjct: 223 TPIADFFL 230


>sp|NPD_PYRFU|NAD-DEPENDENT protein deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SSIADFFL 10
+ IADFFL
Sbjct: 223 TPIADFFL 230


>sp|NPD_PYRAB|NAD-DEPENDENT protein deacylase|Pyrococcus abyssi (strain GE5 /

Query: 3 SSIADFFL 10
+ IADFFL
Sbjct: 223 TPIADFFL 230




117|Sequence|581|590|ADFFLALTIC

>sp|HTPX_HALSA|PROTEASE HtpX homolog|Halobacterium salinarum (strain ATCC 700922

Query: 1 ADFFLALTI 9
ADFFLA+ +
Sbjct: 169 ADFFLAIVV 177


>sp|RFCL_METMJ|REPLICATION factor C large subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DFFLALTI 9
DFF A+TI
Sbjct: 362 DFFTAITI 369


>sp|PUR5_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ADFFLALT 8
DF+LA+T
Sbjct: 53 GDFYLAIT 60


>sp|PUR5_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DFFLALT 8
DF+LA+T
Sbjct: 53 DFYLAIT 59


>sp|YJ16_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 1 ADFFLAL 7
+DFFLAL
Sbjct: 208 SDFFLAL 214




118|Sequence|586|595|ALTICNSVMV

***** No hits found ******


119|Sequence|591|600|NSVMVSTTTE

>sp|DIPPS_ARCFU|BIFUNCTIONAL IPC transferase and DIPP|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SVMVSTTTE 10
SVMVS T+E
Sbjct: 411 SVMVSYTSE 419


>sp|DIPPS_THEKO|BIFUNCTIONAL IPC transferase and DIPP|Thermococcus kodakarensis (strain ATCC

Query: 2 SVMVSTTTE 10
SVMVS +TE
Sbjct: 349 SVMVSYSTE 357




120|Sequence|596|605|STTTEPRQRV

>sp|CDC6G_HALMA|ORC1-TYPE DNA replication protein 7|Haloarcula marismortui (strain ATCC 43049

Query: 1 STTTEPRQRV 10
STT P+QRV
Sbjct: 117 STTGYPQQRV 126




121|Sequence|601|610|PRQRVTIKPS

>sp|RASEA_METAC|ARCHAEOSINE synthase subunit beta|Methanosarcina acetivorans (strain ATCC

Query: 2 RQRVTIKPS 10
RQR+ +KPS
Sbjct: 11 RQRIKVKPS 19


>sp|IF2A_METS3|TRANSLATION initiation factor 2 subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 PRQRVTIKPS 10
PR R+T+K +
Sbjct: 221 PRYRITVKST 230


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 3 QRVTIKPS 10
+R+T+KPS
Sbjct: 858 ERITLKPS 865


>sp|CCA_THEGJ|CCA-ADDING enzyme|Thermococcus gammatolerans (strain DSM 15229

Query: 2 RQRVTIKP 9
R+RV IKP
Sbjct: 357 RERVKIKP 364


>sp|IF2P_PYRNV|PROBABLE translation initiation factor IF-2|Pyrobaculum neutrophilum (strain

Query: 1 PRQRVTIKPS 10
PR ++T++P
Sbjct: 223 PRDKLTVRPG 232


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RQRVTIKP 9
R+RV +KP
Sbjct: 354 RKRVAVKP 361




122|Sequence|606|615|TIKPSSKALG

>sp|RS8_METBU|SMALL ribosomal subunit protein uS8|Methanococcoides burtonii (strain

Query: 1 TIKPSSKALG 10
TI+P+SK +G
Sbjct: 26 TIRPASKLIG 35


>sp|COFE_METM7|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C7 /

Query: 1 TIKPSSKAL 9
TIKPS++A+
Sbjct: 60 TIKPSNEAI 68


>sp|COFE_METM6|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C6 /

Query: 1 TIKPSSKAL 9
TIKPS++A+
Sbjct: 60 TIKPSNEAI 68


>sp|ENO_SACI7|ENOLASE islandicus (strain Y.G.57.14 /

Query: 2 IKPSSKALG 10
+K SSKALG
Sbjct: 117 LKTSSKALG 125


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TIKPSSKALG 10
TI+ ++KALG
Sbjct: 198 TIREAAKALG 207


>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 1 TIKPSSKALG 10
TI+ ++KALG
Sbjct: 198 TIREAAKALG 207


>sp|RL7A_SULTO|LARGE ribosomal subunit protein eL8|Sulfurisphaera tokodaii (strain DSM

Query: 4 PSSKALG 10
PS KALG
Sbjct: 81 PSKKALG 87




123|Sequence|611|620|SKALGTSLEK

>sp|DPHB_METTP|DIPHTHINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 SKALGTSLEK 10
S+ +GTS+E+
Sbjct: 36 SRLMGTSIER 45


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SKALGTSLE 9
++ LGTSLE
Sbjct: 508 ARKLGTSLE 516


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SKALGTSLE 9
++ LGTSLE
Sbjct: 506 ARKLGTSLE 514


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 KALGTSLEK 10
K +GTS+EK
Sbjct: 845 KEIGTSVEK 853




124|Sequence|616|625|TSLEKIQQLF

>sp|NADA_METMA|QUINOLINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TSLEKIQQ 8
TSLEK+QQ
Sbjct: 272 TSLEKMQQ 279


>sp|DPHB_METTP|DIPHTHINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 TSLEKIQQLF 10
TS+E+++QL+
Sbjct: 41 TSIERLEQLY 50


>sp|Y739_SACI1|MEMO1 family protein YN1551_0739|Saccharolobus islandicus (strain

Query: 2 SLEKIQQL 9
++EKIQQL
Sbjct: 213 AIEKIQQL 220


>sp|Y2180_SACI7|MEMO1 family protein YG5714_2180|Saccharolobus islandicus (strain

Query: 2 SLEKIQQL 9
++EKIQQL
Sbjct: 213 AIEKIQQL 220


>sp|Y2134_SACI3|MEMO1 family protein M1627_2134|Saccharolobus islandicus (strain M.16.27)

Query: 2 SLEKIQQL 9
++EKIQQL
Sbjct: 213 AIEKIQQL 220


>sp|Y2061_SACI6|MEMO1 family protein M164_2061|Saccharolobus islandicus (strain M.16.4 /

Query: 2 SLEKIQQL 9
++EKIQQL
Sbjct: 213 AIEKIQQL 220


>sp|Y2054_SACI4|MEMO1 family protein M1425_2054|Saccharolobus islandicus (strain M.14.25

Query: 2 SLEKIQQL 9
++EKIQQL
Sbjct: 213 AIEKIQQL 220


>sp|ACDG_METKA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanopyrus

Query: 2 SLEKIQQLF 10
SLEK+Q+L
Sbjct: 50 SLEKLQELL 58


>sp|Y2219_SACI2|MEMO1 family protein LS215_2219|Saccharolobus islandicus (strain L.S.2.15

Query: 2 SLEKIQQL 9
++EKIQQL
Sbjct: 213 AIEKIQQL 220


>sp|Y066_SACS2|MEMO1 family protein SSO0066|Saccharolobus solfataricus (strain ATCC

Query: 2 SLEKIQQL 9
++EKIQQL
Sbjct: 213 AIEKIQQL 220


>sp|RS19_NITMS|SMALL ribosomal subunit protein uS19|Nitrosopumilus maritimus (strain

Query: 2 SLEKIQQLF 10
SLEK+ QLF
Sbjct: 19 SLEKLFQLF 27


>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 LEKIQQLF 10
LEKI Q+F
Sbjct: 438 LEKIDQIF 445


>sp|PIMT_METM7|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 TSLEKIQQLF 10
T++E+I +LF
Sbjct: 105 TTIERIPELF 114


>sp|PIMT_METMP|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TSLEKIQQLF 10
T++E+I +LF
Sbjct: 105 TTIERIPELF 114


>sp|PIMT_METM5|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 TSLEKIQQLF 10
T++E+I +LF
Sbjct: 105 TTIERIPELF 114


>sp|RADB_METST|DNA repair and recombination protein|Methanosphaera stadtmanae

Query: 2 SLEKIQQL 9
SLE+IQQ+
Sbjct: 71 SLERIQQI 78


>sp|RS5_CENSY|SMALL ribosomal subunit protein uS5|Cenarchaeum symbiosum (strain A)

Query: 1 TSLEKIQQ 8
TSLE+IQ+
Sbjct: 43 TSLEEIQE 50


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SLEKIQQL 9
+LEKI+QL
Sbjct: 731 TLEKIEQL 738


>sp|FLAC_METJA|PUTATIVE flagella-related protein C|Methanocaldococcus jannaschii (strain

Query: 1 TSLEKIQQL 9
TSLEK+++L
Sbjct: 72 TSLEKLERL 80


>sp|PSA_PICTO|PROTEASOME subunit alpha|Picrophilus torridus (strain ATCC 700027

Query: 1 TSLEKIQ 7
TSLEKIQ
Sbjct: 62 TSLEKIQ 68


>sp|CBID_SULAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SLEKIQQL 9
SLEKIQ++
Sbjct: 289 SLEKIQKI 296


>sp|CMR7B_SACS2|PUTATIVE CRISPR system CMR subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 TSLEKIQQ 8
T +EKIQQ
Sbjct: 155 TKIEKIQQ 162




125|Sequence|621|630|IQQLFQKLKL

>sp|Y252_PYRCJ|UPF0248 protein Pcal_0252|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 IQQLFQKLK 9
++QLF KLK
Sbjct: 1 MRQLFNKLK 9


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 2 QQLFQKLK 9
+ LFQKLK
Sbjct: 374 ESLFQKLK 381


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 QQLFQKLKL 10
++LFQKL++
Sbjct: 328 EELFQKLEI 336




126|Sequence|626|635|QKLKLLSLSQ

>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 QKLKLLSLS 9
Q+L+LLSLS
Sbjct: 1107 QRLELLSLS 1115




127|Sequence|631|640|LSLSQSFSST

***** No hits found ******


128|Sequence|636|645|SFSSTAPSDT

>sp|AATK_SULTO|A-TYPE ATP synthase subunit K|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FSSTAPSDT 10
FS+ AP DT
Sbjct: 20 FSAQAPYDT 28


>sp|XACC_HALVD|PENTONOLACTONASE XacC|Haloferax volcanii (strain ATCC 29605

Query: 2 FSSTAPSDT 10
F T PSDT
Sbjct: 108 FCGTMPSDT 116




129|Sequence|641|650|APSDTDLGES

>sp|RS8E_METB6|SMALL ribosomal subunit protein eS8|Methanoregula boonei (strain DSM

Query: 1 APSDTDLGE 9
AP+DT +GE
Sbjct: 30 APADTHIGE 38


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PSDTDLGE 9
P+DTD+ E
Sbjct: 164 PADTDIDE 171


>sp|RS8E_METMJ|SMALL ribosomal subunit protein eS8|Methanoculleus marisnigri (strain

Query: 1 APSDTDLGE 9
AP++T +GE
Sbjct: 30 APAETHIGE 38


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 APSDTDLGE 9
AP DLGE
Sbjct: 409 APEPEDLGE 417


>sp|KTHY_METST|PROBABLE thymidylate kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PSDTDLGE 9
P+D+D+G+
Sbjct: 37 PTDSDIGK 44


>sp|TRPB_PYRIL|TRYPTOPHAN synthase beta chain|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PSDTDLGES 10
P D D GES
Sbjct: 19 PKDPDEGES 27




130|Sequence|646|655|DLGESLGANV

>sp|ACDG1_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 1 DLGESLGANV 10
DL ++LGANV
Sbjct: 438 DLEDTLGANV 447


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii

Query: 2 LGESLGANV 10
LGESLG +
Sbjct: 62 LGESLGCTI 70


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 1 DLGESLGA 8
D+GE+LGA
Sbjct: 176 DVGEALGA 183


>sp|TRUB_META3|PROBABLE tRNA pseudouridine synthase B|Methanococcus aeolicus (strain ATCC

Query: 1 DLGESLGAN 9
D+GE+LG +
Sbjct: 170 DMGEALGTS 178


>sp|TRUB_METM7|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C7

Query: 1 DLGESLGAN 9
D+GE+LG +
Sbjct: 170 DMGEALGTS 178


>sp|TRUB_METMP|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain DSM

Query: 1 DLGESLGAN 9
D+GE+LG +
Sbjct: 170 DMGEALGTS 178


>sp|TRUB_METM5|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C5

Query: 1 DLGESLGAN 9
D+GE+LG +
Sbjct: 170 DMGEALGTS 178


>sp|TRUB_METM6|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C6

Query: 1 DLGESLGAN 9
D+GE+LG +
Sbjct: 170 DMGEALGTS 178


>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii (strain

Query: 1 DLGESLGAN 9
D+GE+LG +
Sbjct: 185 DIGEALGTS 193


>sp|PANB_METS5|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LGESLGANV 10
+G+SLG NV
Sbjct: 42 VGDSLGMNV 50


>sp|HMGCS_METBF|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DLGESLGANV 10
DLG ++GA+V
Sbjct: 133 DLGMAIGADV 142


>sp|RL13_NATPD|LARGE ribosomal subunit protein uL13|Natronomonas pharaonis (strain ATCC

Query: 1 DLGESLGANV 10
++ E+LGANV
Sbjct: 133 EVSENLGANV 142


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 3 GESLGANV 10
GE+ GANV
Sbjct: 298 GEARGANV 305


>sp|TRUB_METKA|PROBABLE tRNA pseudouridine synthase B|Methanopyrus kandleri (strain AV19 /

Query: 1 DLGESLG 7
D+GE+LG
Sbjct: 184 DIGEALG 190


>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LGESLGAN 9
+GESLG N
Sbjct: 259 IGESLGKN 266


>sp|AROA_METJA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 DLGESLGANV 10
D+ +SLGAN+
Sbjct: 417 DVMKSLGANI 426


>sp|TRUB_HALSA|PROBABLE tRNA pseudouridine synthase B|Halobacterium salinarum (strain ATCC

Query: 1 DLGESLGAN 9
D+G +LG N
Sbjct: 157 DIGRALGTN 165


>sp|TRUB_HALS3|PROBABLE tRNA pseudouridine synthase B|Halobacterium salinarum (strain ATCC

Query: 1 DLGESLGAN 9
D+G +LG N
Sbjct: 157 DIGRALGTN 165


>sp|HMGCS_METBU|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DLGESLGANV 10
DLG ++GA+V
Sbjct: 133 DLGMAIGADV 142


>sp|Y1312_METJA|UPF0026 protein MJ1312|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LGESLGAN 9
LG+SLG N
Sbjct: 13 LGKSLGIN 20


>sp|AGL3_SULAC|UDP-SULFOQUINOVOSE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GESLGANV 10
GE LG NV
Sbjct: 310 GEELGLNV 317


>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DLGESLGANV 10
DLG ++GA+V
Sbjct: 132 DLGLAIGADV 141


>sp|HMGCS_METAC|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DLGESLGANV 10
DLG ++GA+V
Sbjct: 133 DLGLAIGADV 142


>sp|HMGCS_METMA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DLGESLGANV 10
DLG ++GA+V
Sbjct: 133 DLGLAIGADV 142


>sp|HERA_PYRFU|DNA double-strand break repair helicase|Pyrococcus furiosus (strain

Query: 1 DLGESLGAN 9
+ GESLG N
Sbjct: 73 EYGESLGEN 81




131|Sequence|651|660|LGANVATTDS

>sp|FLGA2_HALVD|FLAGELLIN A2|Haloferax volcanii (strain ATCC 29605

Query: 2 GANVATTDS 10
GAN AT DS
Sbjct: 118 GANSATNDS 126


>sp|MEND_HALLT|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LGANVATTD 9
LGA ATTD
Sbjct: 468 LGAGSATTD 476




132|Sequence|656|665|ATTDSDERDD

>sp|COFC_METMJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TTDSDERDD 10
+TD DE++D
Sbjct: 164 STDIDEKED 172




133|Sequence|661|670|DERDDASVCS

>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 2 ERDDASVC 9
ERDD VC
Sbjct: 803 ERDDQVVC 810


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 ERDDASVC 9
ERDD VC
Sbjct: 796 ERDDQVVC 803


>sp|RS12_METLZ|SMALL ribosomal subunit protein uS12|Methanocorpusculum labreanum (strain

Query: 1 DERDDASVC 9
DE D+ ++C
Sbjct: 93 DEHDEVTIC 101


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 3 RDDASVC 9
RD+A+VC
Sbjct: 363 RDEATVC 369


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 ERDDASVC 9
ERDD VC
Sbjct: 797 ERDDQIVC 804


>sp|HIS8_HALLT|HISTIDINOL-PHOSPHATE aminotransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 DERDDASVC 9
DERDD +V
Sbjct: 209 DERDDVAVL 217




134|Sequence|666|675|ASVCSGGDST

>sp|KHSE_AERPE|HOMOSERINE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 3 VCSGGDST 10
VCSGG+S
Sbjct: 39 VCSGGNSV 46


>sp|NADK_METST|NAD kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 VCSGGDST 10
+C GGD T
Sbjct: 61 LCVGGDGT 68


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 5 SGGDST 10
SGGDST
Sbjct: 70 SGGDST 75


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 4 CSGGDST 10
C GGD T
Sbjct: 703 CVGGDKT 709


>sp|PDXT_METTH|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanothermobacter

Query: 1 ASVCSGGDST 10
A + SGG+ST
Sbjct: 47 AIIISGGEST 56




135|Sequence|671|680|GGDSTDDGGY

>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGDSTDDGGY 10
GG + DDG +
Sbjct: 160 GGTAADDGSF 169


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 DDGGY 10
DDGGY
Sbjct: 162 DDGGY 166


>sp|RPO2N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 1 GGDSTDDGGY 10
G D D GGY
Sbjct: 138 GEDPADLGGY 147


>sp|PYRK_PYRFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus furiosus

Query: 4 STDDGGY 10
+TDDG Y
Sbjct: 144 TTDDGSY 150


>sp|CAR_HALS3|TRANSDUCER protein Car|Halobacterium salinarum (strain ATCC 29341

Query: 2 GDSTDDGG 9
GD+ DDGG
Sbjct: 27 GDNEDDGG 34


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 1 GGDSTDDGGY 10
G D TD+G +
Sbjct: 683 GDDETDEGMF 692




136|Sequence|676|685|DDGGYRSSMW

>sp|PELO_HALMA|PROTEIN pelota homolog|Haloarcula marismortui (strain ATCC 43049

Query: 1 DDGGYRSSMW 10
D GG R MW
Sbjct: 56 DKGGEREPMW 65


>sp|PELO_NATPD|PROTEIN pelota homolog|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DDGGYRSSMW 10
D GG R MW
Sbjct: 56 DTGGEREPMW 65


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DDGGYR 6
DDGG+R
Sbjct: 270 DDGGWR 275


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DDGGYRSSMW 10
D G R+S+W
Sbjct: 571 DTGSIRASLW 580


>sp|KDGA_PICTO|2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE aldolase|Picrophilus torridus (strain ATCC 700027

Query: 2 DGGYRSSMW 10
+GGYR M+
Sbjct: 252 NGGYRPPMY 260


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DDGGYRSSMW 10
D+G Y S+W
Sbjct: 361 DNGKYTDSIW 370


>sp|LIPB_PYRAR|PROBABLE octanoyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 GGYRSSMW 10
GG RS +W
Sbjct: 88 GGVRSYLW 95


>sp|NADM_ARCFU|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 YRSSMW 10
YR+S+W
Sbjct: 82 YRNSLW 87


>sp|Y2239_ARCFU|UNCHARACTERIZED protein AF_2239|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DDGGYRS 7
DDG +RS
Sbjct: 74 DDGNFRS 80


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus fulgidus

Query: 2 DGGYRSSMW 10
DGG+ ++W
Sbjct: 367 DGGWYRTVW 375


>sp|APGM_METVS|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DDGGYRSSM 9
+ GGYR+++
Sbjct: 137 ESGGYRAAL 145


>sp|KDGK2_HALVD|2-DEHYDRO-3-DEOXYGALACTONOKINASE volcanii (strain ATCC 29605

Query: 2 DGGYRSSMW 10
D YRS +W
Sbjct: 165 DLNYRSKLW 173


>sp|GLMM_THEON|PROBABLE phosphoglucosamine mutase|Thermococcus onnurineus (strain NA1)

Query: 1 DDGGYRSSMW 10
D G +R + W
Sbjct: 128 DSGNFRKAAW 137


>sp|APGM_METMP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DDGGYRSSM 9
+ GGYR+++
Sbjct: 137 ESGGYRAAL 145


>sp|APGM_METM7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C7 /

Query: 1 DDGGYRSSM 9
+ GGYR+++
Sbjct: 137 ESGGYRAAL 145


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 DDGGYRS 7
D GGYR+
Sbjct: 691 DGGGYRA 697


>sp|APGM_METM5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C5 /

Query: 1 DDGGYRSSM 9
+ GGYR+++
Sbjct: 137 ESGGYRAAL 145


>sp|APGM_METM6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C6 /

Query: 1 DDGGYRSSM 9
+ GGYR+++
Sbjct: 137 ESGGYRAAL 145


>sp|ARCH_PYRNV|PROTEIN archease|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 DGGYR 6
DGGYR
Sbjct: 96 DGGYR 100




137|Sequence|681|690|RSSMWDQGDI

>sp|TYW2_METJA|TRNA(PHE) (4-demethylwyosine(37)-C(7))

Query: 4 MWDQGDI 10
MW QG+I
Sbjct: 78 MWSQGNI 84


>sp|TRUD_THEON|PROBABLE tRNA pseudouridine synthase D|Thermococcus onnurineus (strain NA1)

Query: 1 RSSMWDQGDI 10
R + W+ GD+
Sbjct: 208 RKNFWETGDV 217


>sp|TRUD_THEKO|PROBABLE tRNA pseudouridine synthase D|Thermococcus kodakarensis (strain

Query: 1 RSSMWDQGDI 10
R + W+ GD+
Sbjct: 208 RKNFWETGDV 217


>sp|OTC_SACS2|ORNITHINE carbamoyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RSSMWDQGD 9
+S++WDQ +
Sbjct: 285 KSAVWDQAE 293


>sp|OTC_SULTO|ORNITHINE carbamoyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RSSMWDQGD 9
+S++WDQ +
Sbjct: 284 KSAVWDQAE 292


>sp|Y1771_AERPE|MEMO1 family protein APE_1771|Aeropyrum pernix (strain ATCC 700893

Query: 2 SSMWDQG 8
+S+WD+G
Sbjct: 95 ASLWDEG 101


>sp|OTC_METST|ORNITHINE carbamoyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 RSSMWDQGD 9
+S++WDQ +
Sbjct: 278 QSAIWDQAE 286


>sp|OTC_PYRAE|ORNITHINE carbamoyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RSSMWDQGD 9
+S++WDQ +
Sbjct: 282 QSAVWDQAE 290


>sp|GFCR_HALWD|TRANSCRIPTIONAL regulator GfcR|Haloquadratum walsbyi (strain DSM 16790

Query: 5 WDQGDI 10
WD+GDI
Sbjct: 129 WDEGDI 134


>sp|OTC_PYRCJ|ORNITHINE carbamoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RSSMWDQGD 9
+S++WDQ +
Sbjct: 282 QSAVWDQAE 290


>sp|OTC_SULAC|ORNITHINE carbamoyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RSSMWDQGD 9
+S++WDQ +
Sbjct: 284 QSAVWDQAE 292


>sp|Y954_METJA|UNCHARACTERIZED protein MJ0954|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WDQGDI 10
WD+G+I
Sbjct: 431 WDKGEI 436


>sp|MCH_HALSA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 5 WDQGDI 10
WD GD+
Sbjct: 269 WDAGDV 274


>sp|MCH_HALS3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 5 WDQGDI 10
WD GD+
Sbjct: 269 WDAGDV 274


>sp|OTC_AERPE|ORNITHINE carbamoyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SSMWDQGD 9
S++WDQ +
Sbjct: 292 SAVWDQAE 299


>sp|ADEC_METB6|ADENINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 2 SSMWDQGDI 10
S W++GD+
Sbjct: 34 SCSWEEGDL 42


>sp|GFCR_HALSA|TRANSCRIPTIONAL regulator GfcR|Halobacterium salinarum (strain ATCC 700922

Query: 1 RSSMWDQGDI 10
R WD+GD+
Sbjct: 123 RKHQWDEGDM 132


>sp|GFCR_HALS3|TRANSCRIPTIONAL regulator GfcR|Halobacterium salinarum (strain ATCC 29341

Query: 1 RSSMWDQGDI 10
R WD+GD+
Sbjct: 123 RKHQWDEGDM 132


>sp|GFCR_HALLT|TRANSCRIPTIONAL regulator GfcR|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 WDQGDI 10
WD+GDI
Sbjct: 127 WDEGDI 132


>sp|T1S1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 1 RSSMWDQGDI 10
+S W+ G+I
Sbjct: 249 KSEYWENGEI 258


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RSSMWDQGD 9
R MW +GD
Sbjct: 758 RKRMWVEGD 766


>sp|GFCR_HALVD|TRANSCRIPTIONAL regulator GfcR|Haloferax volcanii (strain ATCC 29605

Query: 5 WDQGDI 10
WD+GD+
Sbjct: 127 WDEGDL 132


>sp|OTC_METHJ|ORNITHINE carbamoyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 SSMWDQGD 9
S++WDQ +
Sbjct: 280 SAVWDQAE 287


>sp|OTC_METLZ|ORNITHINE carbamoyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 RSSMWDQGD 9
+S +WDQ +
Sbjct: 279 QSGVWDQAE 287


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 WDQGDI 10
W++GDI
Sbjct: 260 WEEGDI 265




138|Sequence|686|695|DQGDILESGS

>sp|CHEB_METBF|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanosarcina barkeri

Query: 1 DQGDILESGS 10
++GDI+E G+
Sbjct: 233 EEGDIIEEGT 242


>sp|CHEB2_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina mazei

Query: 2 QGDILESGS 10
+GDI+E G+
Sbjct: 237 EGDIMEEGT 245


>sp|NFI_SULAC|ENDONUCLEASE V|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GDILESGS 10
GDI+E GS
Sbjct: 132 GDIVEEGS 139


>sp|CHEB_PYRAB|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus abyssi

Query: 1 DQGDILESG 9
++GD++E G
Sbjct: 225 EEGDVVEEG 233


>sp|CSG1_HALHT|CELL surface glycoprotein 1|Haloarcula hispanica (strain ATCC 33960

Query: 3 GDILESGS 10
GD LE+GS
Sbjct: 423 GDTLEAGS 430


>sp|FILR2_METH6|PROBABLE methanogenesis regulatory protein FilR2|Methanothrix harundinacea

Query: 1 DQGDILES 8
D GD+LE+
Sbjct: 6 DSGDVLEA 13


>sp|CHEB_PYRHO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus horikoshii

Query: 1 DQGDILESG 9
++GD++E G
Sbjct: 225 EEGDVVEEG 233


>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 4 DILESGS 10
DILESG+
Sbjct: 304 DILESGA 310




139|Sequence|691|700|LESGSGTSLE

>sp|Y031_METPE|PUTATIVE HTH-type transcriptional regulatory protein|Methanosphaerula

Query: 2 ESGSGTSLE 10
ESG GT+LE
Sbjct: 161 ESGMGTTLE 169


>sp|Y195_METB6|PUTATIVE HTH-type transcriptional regulatory protein|Methanoregula boonei

Query: 2 ESGSGTSLE 10
ESG GT+LE
Sbjct: 161 ESGMGTTLE 169


>sp|IDI2_SULTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ESGSGTSLE 10
ESGSG S+E
Sbjct: 194 ESGSGLSME 202


>sp|IDI2_METS5|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Metallosphaera sedula (strain ATCC 51363

Query: 2 ESGSGTSLE 10
ESG+G S+E
Sbjct: 192 ESGTGMSME 200


>sp|Y2347_METMJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanoculleus

Query: 2 ESGSGTSLE 10
ESG GT+L+
Sbjct: 161 ESGMGTTLD 169


>sp|IDI2_THEON|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus onnurineus (strain NA1)

Query: 2 ESGSGTSLE 10
E+G+G S+E
Sbjct: 204 ETGAGVSME 212


>sp|IDI2_SACSH|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 ESGSGTSLE 10
ESG+G S+E
Sbjct: 194 ESGNGISME 202


>sp|IDI2_SACI7|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 ESGSGTSLE 10
ESG+G S+E
Sbjct: 194 ESGNGISME 202


>sp|IDI2_SACI6|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 ESGSGTSLE 10
ESG+G S+E
Sbjct: 194 ESGNGISME 202


>sp|IDI2_SACI4|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 ESGSGTSLE 10
ESG+G S+E
Sbjct: 194 ESGNGISME 202


>sp|IDI2_SACI3|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain M.16.27)

Query: 2 ESGSGTSLE 10
ESG+G S+E
Sbjct: 194 ESGNGISME 202


>sp|IDI2_SACI2|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 ESGSGTSLE 10
ESG+G S+E
Sbjct: 194 ESGNGISME 202


>sp|IDI2_SACI1|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 ESGSGTSLE 10
ESG+G S+E
Sbjct: 194 ESGNGISME 202


>sp|IDI2_SACS2|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ESGSGTSLE 10
ESG+G S+E
Sbjct: 194 ESGNGISME 202


>sp|IDI2_THEKO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ESGSGTSLE 10
E+G+G S+E
Sbjct: 204 ETGAGVSME 212


>sp|IDI2_THESM|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus sibiricus (strain DSM 12597

Query: 2 ESGSGTSLE 10
E+G+G S+E
Sbjct: 204 ETGAGVSME 212




140|Sequence|696|705|GTSLEEALEA

>sp|Y191_METTH|PUTATIVE glutamine amidotransferase MTH_191|Methanothermobacter

Query: 1 GTSLEEALE 9
G SLEEALE
Sbjct: 225 GYSLEEALE 233


>sp|THIE_PYRAB|THIAMINE-PHOSPHATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 SLEEALEA 10
SLEEALEA
Sbjct: 109 SLEEALEA 116


>sp|METXA_METST|HOMOSERINE O-acetyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 TSLEEALE 9
TSLEEAL+
Sbjct: 296 TSLEEALK 303


>sp|THIE_PYRFU|THIAMINE-PHOSPHATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SLEEALEA 10
SLEEALEA
Sbjct: 109 SLEEALEA 116


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GTSLEEALE 9
GT+L EALE
Sbjct: 808 GTNLYEALE 816


>sp|DKFP_METJA|FRUCTOSE-BISPHOSPHATE aldolase/6-deoxy-5-ketofructose 1-phosphate

Query: 1 GTSLEEALE 9
G SLEEAL+
Sbjct: 295 GKSLEEALK 303


>sp|GLYA_NATPD|SERINE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GTSLEEALEA 10
GT EEALEA
Sbjct: 328 GTVAEEALEA 337


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 2 TSLEEALEA 10
TSLEEA EA
Sbjct: 150 TSLEEAEEA 158


>sp|PURT_IGNH4|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Ignicoccus hospitalis

Query: 1 GTSLEEALE 9
G+++EEALE
Sbjct: 380 GSTVEEALE 388


>sp|HIS4_PYRFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Pyrococcus furiosus (strain ATCC

Query: 3 SLEEALE 9
SLEEALE
Sbjct: 221 SLEEALE 227


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GTSLEEALE 9
GT+LEEA E
Sbjct: 407 GTALEEARE 415


>sp|THIE_PYRHO|THIAMINE-PHOSPHATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 SLEEALEA 10
SLEEALEA
Sbjct: 109 SLEEALEA 116


>sp|PURT_SACS2|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Saccharolobus

Query: 1 GTSLEEALE 9
G S+EEALE
Sbjct: 377 GNSVEEALE 385


>sp|NADA_METKA|QUINOLINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 GTSLEEALEA 10
G SLE ALEA
Sbjct: 23 GDSLELALEA 32


>sp|CYSO_AERPE|PROTEIN CysO|Aeropyrum pernix (strain ATCC 700893

Query: 2 TSLEEALEA 10
+LEEA+EA
Sbjct: 318 VTLEEAMEA 326




141|Sequence|701|710|EALEAPATDL

>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EALEAPATD 9
E ++APATD
Sbjct: 1017 EVIKAPATD 1025


>sp|AROD_PYRAE|3-DEHYDROQUINATE dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EALEAPATDL 10
+ALEAP T L
Sbjct: 22 KALEAPVTCL 31




142|Sequence|706|715|PATDLARPEF

>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 1 PATDLARPEF 10
P+ D+A PEF
Sbjct: 342 PSYDIAWPEF 351


>sp|GLPK_HALSA|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 TDLARPE 9
TDLARPE
Sbjct: 438 TDLARPE 444


>sp|GLPK_HALS3|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 29341

Query: 3 TDLARPE 9
TDLARPE
Sbjct: 438 TDLARPE 444


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 ATDLARPEF 10
++DLARPE
Sbjct: 82 SSDLARPEL 90


>sp|KPYK_PYRAE|PYRUVATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PATDLARPE 9
P+TD+ RP+
Sbjct: 25 PSTDVLRPD 33


>sp|TRPCD_ARCFU|TRYPTOPHAN biosynthesis protein TrpCD|Archaeoglobus fulgidus (strain ATCC

Query: 1 PATDLARPE 9
P T+ ARPE
Sbjct: 394 PLTNPARPE 402


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 ATDLARP 8
+TDLARP
Sbjct: 80 STDLARP 86


>sp|GLPK_HALMA|GLYCEROL kinase|Haloarcula marismortui (strain ATCC 43049

Query: 3 TDLARPE 9
TD+ARP+
Sbjct: 438 TDIARPQ 444


>sp|Y691_METJA|DNA-BINDING protein MJ0691|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 LARPEF 10
LARPEF
Sbjct: 56 LARPEF 61


>sp|TRUA_THEKO|TRNA pseudouridine synthase A|Thermococcus kodakarensis (strain ATCC

Query: 4 DLARPE 9
DLARPE
Sbjct: 74 DLARPE 79


>sp|TRUA_THEGJ|TRNA pseudouridine synthase A|Thermococcus gammatolerans (strain DSM

Query: 4 DLARPE 9
DLARPE
Sbjct: 74 DLARPE 79




143|Sequence|711|720|ARPEFCYEAE

>sp|DHYS1_METAC|PROBABLE deoxyhypusine synthase 1|Methanosarcina acetivorans (strain ATCC

Query: 4 EFCYEAE 10
E CYEAE
Sbjct: 223 EICYEAE 229


>sp|Y1446_ARCFU|UNCHARACTERIZED protein AF_1446|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ARPEFCYEAE 10
RPEF Y AE
Sbjct: 114 VRPEFSYVAE 123


>sp|GLCDH_SACSO|GLUCOSE 1-dehydrogenase|Saccharolobus solfataricus (Sulfolobus

Query: 1 ARPEFCYEAE 10
RP+FC E
Sbjct: 102 GRPDFCETGE 111


>sp|GLCD2_SACS2|GLUCOSE 1-dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ARPEFCYEAE 10
RP+FC E
Sbjct: 104 GRPDFCETGE 113


>sp|GLCD1_SACS2|GLUCOSE 1-dehydrogenase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ARPEFCYEAE 10
RP+FC E
Sbjct: 102 GRPDFCETGE 111


>sp|GLCD1_PICTO|GLUCOSE 1-dehydrogenase 1|Picrophilus torridus (strain ATCC 700027

Query: 1 ARPEFCYEAE 10
RP+FC E
Sbjct: 96 GRPDFCETGE 105


>sp|Y1631_PYRHO|PUTATIVE uncharacterized protein PH1631|Pyrococcus horikoshii (strain ATCC

Query: 1 ARPEFCY 7
ARP +CY
Sbjct: 49 ARPYYCY 55


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 2 RPEFCYEAE 10
RP++C E E
Sbjct: 209 RPDYCSEKE 217


>sp|AGL10_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl10|Haloferax volcanii

Query: 4 EFCYEA 9
EFCY A
Sbjct: 201 EFCYRA 206


>sp|Y3815_HALS3|DNA-BINDING protein OE_3815R|Halobacterium salinarum (strain ATCC 29341

Query: 1 ARPEFCYEAE 10
++PEF +AE
Sbjct: 68 SKPEFAEQAE 77


>sp|Y2008_HALSA|DNA-BINDING protein VNG_2008H|Halobacterium salinarum (strain ATCC 700922

Query: 1 ARPEFCYEAE 10
++PEF +AE
Sbjct: 68 SKPEFAEQAE 77


>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 RPEFC 6
RPEFC
Sbjct: 337 RPEFC 341


>sp|HIS6_THEGJ|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus gammatolerans

Query: 1 ARPEFCYEA 9
RPE YEA
Sbjct: 205 GRPEHFYEA 213


>sp|HIS6_THEKO|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus kodakarensis

Query: 1 ARPEFCYEA 9
RPE YEA
Sbjct: 205 GRPEHFYEA 213


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 2 RPEFCYEAE 10
RP++C E E
Sbjct: 215 RPDYCGEKE 223




144|Sequence|716|725|CYEAESPDEA

>sp|SRP54_PYRNV|SIGNAL recognition particle 54 kDa|Pyrobaculum neutrophilum (strain DSM

Query: 2 YEAESPDE 9
YEA SPDE
Sbjct: 205 YEAVSPDE 212


>sp|IF2B_PICTO|TRANSLATION initiation factor 2 subunit|Picrophilus torridus (strain ATCC

Query: 1 CYEAESPD 8
CYE +SPD
Sbjct: 103 CYECKSPD 110


>sp|PYRF_METTE|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina thermophila

Query: 1 CYEAESPDEA 10
Y+AESP EA
Sbjct: 190 IYKAESPKEA 199


>sp|PYRF_METMA|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina mazei (strain ATCC

Query: 1 CYEAESPDEA 10
Y+AESP EA
Sbjct: 196 IYKAESPKEA 205


>sp|NADC_METTH|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 3 EAESPDEA 10
E ESPD+A
Sbjct: 189 EVESPDDA 196


>sp|PYRF_METAC|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina acetivorans (strain ATCC

Query: 1 CYEAESPDEA 10
Y+AESP EA
Sbjct: 196 IYKAESPKEA 205


>sp|SRP54_PYRAE|SIGNAL recognition particle 54 kDa|Pyrobaculum aerophilum (strain ATCC

Query: 2 YEAESPDE 9
Y+A SPDE
Sbjct: 205 YDAVSPDE 212


>sp|SRP54_PYRIL|SIGNAL recognition particle 54 kDa|Pyrobaculum islandicum (strain DSM 4184

Query: 2 YEAESPDE 9
YEA +PDE
Sbjct: 205 YEAVNPDE 212


>sp|PYRF_METBF|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CYEAESPDEA 10
Y+AESP EA
Sbjct: 196 IYKAESPREA 205


>sp|AATF_METM6|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain C6 /

Query: 2 YEAESPDEA 10
YE +SP++A
Sbjct: 24 YEVKSPEQA 32


>sp|PELO_PYRCJ|PROTEIN pelota homolog|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 YEAESPDEA 10
Y E PDEA
Sbjct: 285 YMKEKPDEA 293


>sp|AATF_METVS|A-TYPE ATP synthase subunit F|Methanococcus vannielii (strain ATCC 35089

Query: 2 YEAESPDEA 10
YE +SP++A
Sbjct: 24 YEVKSPEQA 32


>sp|SRP54_ACIAM|SIGNAL recognition particle 54 kDa|Acidianus ambivalens (Desulfurolobus

Query: 2 YEAESPDE 9
YEA PDE
Sbjct: 208 YEAIKPDE 215


>sp|AATF_METM5|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain C5 /

Query: 2 YEAESPDEA 10
YE +SP++A
Sbjct: 24 YEVKSPEQA 32


>sp|AATF_METTH|A-TYPE ATP synthase subunit F|Methanothermobacter thermautotrophicus

Query: 2 YEAESPDEA 10
Y E+PDEA
Sbjct: 26 YVVETPDEA 34


>sp|AATF_METM7|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain C7 /

Query: 2 YEAESPDEA 10
YE +SP++A
Sbjct: 24 YEVKSPEQA 32


>sp|AATF_METMP|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain DSM

Query: 2 YEAESPDEA 10
YE SP++A
Sbjct: 24 YEVNSPEQA 32


>sp|KPYK_METJA|PYRUVATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CYEAESPDEA 10
C E ES DE
Sbjct: 328 CLEVESIDEG 337


>sp|DHYS1_METAC|PROBABLE deoxyhypusine synthase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 CYEAES 6
CYEAES
Sbjct: 225 CYEAES 230


>sp|SRP54_PYRAR|SIGNAL recognition particle 54 kDa|Pyrobaculum arsenaticum (strain DSM

Query: 2 YEAESPDE 9
Y+A +PDE
Sbjct: 205 YDAVNPDE 212


>sp|QUEC_HALSA|7-CYANO-7-DEAZAGUANINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 CYEAESP 7
CY AE+P
Sbjct: 190 CYRAEAP 196


>sp|QUEC_HALS3|7-CYANO-7-DEAZAGUANINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 CYEAESP 7
CY AE+P
Sbjct: 190 CYRAEAP 196


>sp|Y1029_THESM|UPF0282 protein TSIB_1029|Thermococcus sibiricus (strain DSM 12597

Query: 2 YEAESPDEA 10
YE+ SP++A
Sbjct: 87 YESSSPEKA 95


>sp|TRPD_METVS|ANTHRANILATE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 CYEAESPDEA 10
C E+PDEA
Sbjct: 120 CKILENPDEA 129




145|Sequence|721|730|SPDEAALVHA

>sp|HEM1_METMJ|GLUTAMYL-TRNA reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PDEAALVH 9
PDEAA +H
Sbjct: 30 PDEAAFLH 37


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius

Query: 2 PDEAALVHA 10
PD++AL+H
Sbjct: 8 PDKSALLHG 16


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SPDEAALVH 9
SPDE+ VH
Sbjct: 751 SPDESGRVH 759


>sp|KDGK1_HALVD|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE volcanii (strain ATCC 29605

Query: 1 SPDEAALVH 9
SPDEAA V+
Sbjct: 176 SPDEAAEVY 184


>sp|FAEHP_METHJ|BIFUNCTIONAL enzyme Fae/Hps|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PDEAALVH 9
PDE L+H
Sbjct: 145 PDEKTLIH 152


>sp|SRP54_AERPE|SIGNAL recognition particle 54 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 2 PDEAALV 8
PDE ALV
Sbjct: 210 PDEVALV 216


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 2 PDEAALVHA 10
PDE ALV A
Sbjct: 91 PDEEALVTA 99


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 2 PDEAALVHA 10
PDE ALV A
Sbjct: 91 PDEEALVTA 99


>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PDEAALV 8
PDEAA V
Sbjct: 127 PDEAAFV 133


>sp|FEN_PYRAE|FLAP endonuclease 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PDEAAL 7
PDEAAL
Sbjct: 303 PDEAAL 308


>sp|IF6_METAC|TRANSLATION initiation factor 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DEAALVH 9
D AALVH
Sbjct: 104 DSAALVH 110


>sp|IF6_METMA|TRANSLATION initiation factor 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DEAALVH 9
D AALVH
Sbjct: 105 DSAALVH 111


>sp|IF6_METBF|TRANSLATION initiation factor 6|Methanosarcina barkeri (strain Fusaro /

Query: 3 DEAALVH 9
D AALVH
Sbjct: 105 DSAALVH 111


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 3 DEAALVHA 10
DEAAL+ A
Sbjct: 449 DEAALIRA 456


>sp|UVRC_NATPD|UVRABC system protein C|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SPDEAALV 8
+PDEAA V
Sbjct: 116 TPDEAATV 123


>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 PDEAALVH 9
P+EAALV
Sbjct: 478 PEEAALVK 485




146|Sequence|726|735|ALVHAAHAYS

>sp|DPH2_PYRHO|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ALVHAAHAY 9
AL+H H+Y
Sbjct: 73 ALIHLGHSY 81


>sp|Y759_ARCFU|UNCHARACTERIZED protein AF_0759|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ALVHAAH 7
A++HAAH
Sbjct: 112 AIIHAAH 118


>sp|RSMA_META3|PROBABLE ribosomal RNA small subunit|Methanococcus aeolicus (strain ATCC

Query: 1 ALVHAAH 7
AL+H+AH
Sbjct: 213 ALIHSAH 219


>sp|TRMY_METHJ|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanospirillum

Query: 1 ALVHAAHA 8
A+VHA HA
Sbjct: 171 AIVHADHA 178


>sp|Y1115_METJA|UNCHARACTERIZED protein MJ1115|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ALVHAAHAY 9
A VH HAY
Sbjct: 150 ADVHVKHAY 158


>sp|MTRE_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus aeolicus (strain ATCC

Query: 1 ALVHAAHAYS 10
ALVH A++ S
Sbjct: 98 ALVHGAYSVS 107




147|Sequence|731|740|AHAYSFTLVS

>sp|YA00_PYRHO|PUTATIVE transport protein PH1000|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 YSFTLVS 10
Y FTLVS
Sbjct: 283 YGFTLVS 289




148|Sequence|736|745|FTLVSRTPEQ

>sp|PROF_HEILC|HEIMDALL profilin|Heimdallarchaeota archaeon (strain LC_2)

Query: 1 FTLVSRTPEQ 10
FT++ +TPE+
Sbjct: 62 FTIIGKTPER 71


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 1 FTLVSRTPE 9
+ LVSRTP+
Sbjct: 567 YHLVSRTPD 575


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 1 FTLVSRTPE 9
+ LVSRTP+
Sbjct: 567 YHLVSRTPD 575


>sp|AROE_METTH|SHIKIMATE dehydrogenase (NADP(+))|Methanothermobacter thermautotrophicus

Query: 2 TLVSRTPEQ 10
T+++RTPE+
Sbjct: 150 TILNRTPEK 158


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 1 FTLVSRTPE 9
+ LVSRTP+
Sbjct: 575 YHLVSRTPD 583


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 FTLVSRTPEQ 10
F LVS PEQ
Sbjct: 363 FVLVSLRPEQ 372


>sp|Y737_METJA|UNCHARACTERIZED protein MJ0737|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LVSRTPEQ 10
LV+RTP Q
Sbjct: 50 LVARTPNQ 57




149|Sequence|741|750|RTPEQVTVRL

>sp|PUR7_HALSA|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 1 RTPEQVTVRL 10
RTP+ TVRL
Sbjct: 72 RTPDGETVRL 81


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 TPEQVTVRL 10
+PEQ+ VRL
Sbjct: 765 SPEQIEVRL 773


>sp|KAD_PYRHO|ADENYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RTPEQV 6
RTPEQV
Sbjct: 86 RTPEQV 91


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RTPEQV 6
RTPEQV
Sbjct: 86 RTPEQV 91


>sp|KAD_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 RTPEQV 6
RTPEQV
Sbjct: 86 RTPEQV 91


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 RTPEQV 6
RTPEQV
Sbjct: 86 RTPEQV 91




150|Sequence|746|755|VTVRLPQGTC

>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VTVRLPQGT 9
VTV LP GT
Sbjct: 4 VTVTLPDGT 12


>sp|METK_META3|S-ADENOSYLMETHIONINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 TVRLPQGT 9
T+RLP GT
Sbjct: 104 TIRLPVGT 111


>sp|AATB_METBA|A-TYPE ATP synthase subunit B|Methanosarcina barkeri

Query: 1 VTVRLPQGT 9
VT+ LP GT
Sbjct: 30 VTINLPDGT 38


>sp|F16PA_METLZ|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 VRLPQGT 9
VR+P+GT
Sbjct: 196 VRIPEGT 202


>sp|RL2_NITMS|LARGE ribosomal subunit protein uL2|Nitrosopumilus maritimus (strain

Query: 1 VTVRLPQG 8
VTV+LP G
Sbjct: 138 VTVKLPSG 145


>sp|AATB_METBF|A-TYPE ATP synthase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 1 VTVRLPQGT 9
VT+ +P GT
Sbjct: 30 VTINMPDGT 38


>sp|CBID_METKA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 VTVRLPQGT 9
V VRLP GT
Sbjct: 76 VRVRLPVGT 84


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VTVRLPQGT 9
VTV LP G+
Sbjct: 4 VTVTLPDGS 12


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VTVRLPQGT 9
VTV LP G+
Sbjct: 4 VTVTLPDGS 12


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VTVRLPQG 8
+TV++P+G
Sbjct: 223 ITVKIPRG 230




151|Sequence|751|760|PQGTCLTFSL

>sp|RL18E_METPE|LARGE ribosomal subunit protein eL18|Methanosphaerula palustris (strain

Query: 2 QGTCLT 7
QGTC+T
Sbjct: 98 QGTCMT 103


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 2 QGTCLTFSL 10
+GTC+ F+L
Sbjct: 875 RGTCVLFTL 883


>sp|OGT_METTH|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 PQGTCLTFS 9
P+G+ LT+S
Sbjct: 106 PRGSTLTYS 114


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 1 PQGTCLTFSL 10
P GT LTF +
Sbjct: 626 PSGTELTFKI 635




152|Sequence|756|765|LTFSLLCTLG

***** No hits found ******


153|Sequence|761|770|LCTLGFDSVR

>sp|ARGJ_METM7|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 CTLGFDSVR 10
C LG+D VR
Sbjct: 393 CDLGYDYVR 401


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LCTLGFDSV 9
LC+L FD++
Sbjct: 153 LCSLNFDNI 161


>sp|RADA_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 1 LCTLGFDS 8
LC LGF S
Sbjct: 90 LCNLGFKS 97


>sp|RADA_METVO|DNA repair and recombination protein|Methanococcus voltae

Query: 1 LCTLGFDS 8
LC LGF S
Sbjct: 59 LCDLGFKS 66


>sp|RADA_METMP|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 LCTLGFDS 8
LC LGF S
Sbjct: 59 LCDLGFKS 66


>sp|RADA_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 LCTLGFDS 8
LC LGF S
Sbjct: 59 LCDLGFKS 66


>sp|RADA_METM7|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 LCTLGFDS 8
LC LGF S
Sbjct: 59 LCDLGFKS 66


>sp|RADA_METM6|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 LCTLGFDS 8
LC LGF S
Sbjct: 59 LCDLGFKS 66


>sp|RADA_METM5|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 LCTLGFDS 8
LC LGF S
Sbjct: 59 LCDLGFKS 66


>sp|ARGJ_METMP|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CTLGFDSVR 10
C LG+D V+
Sbjct: 393 CDLGYDYVK 401


>sp|PIMT_METAR|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LCTLGFDSVR 10
L LGFD+V+
Sbjct: 94 LSRLGFDNVK 103


>sp|FTR_METBU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LCTLGFDSV 9
CT GF S+
Sbjct: 76 FCTFGFKSL 84


>sp|MTAD_NATPD|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 TLGFDSVR 10
TLGFD+ R
Sbjct: 344 TLGFDAGR 351


>sp|AROK_METS3|SHIKIMATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 TLGFDS 8
TLGFDS
Sbjct: 224 TLGFDS 229


>sp|ARGJ_METVS|GLUTAMATE N-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 CTLGFDSVR 10
C LG++ VR
Sbjct: 393 CDLGYEYVR 401


>sp|ARGJ_METM6|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 CTLGFDSVR 10
C LG++ VR
Sbjct: 393 CDLGYEYVR 401


>sp|ARLY_META3|ARGININOSUCCINATE lyase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 LGFDSV 9
LGFDSV
Sbjct: 221 LGFDSV 226


>sp|ARLY_HALMA|ARGININOSUCCINATE lyase|Haloarcula marismortui (strain ATCC 43049

Query: 4 LGFDSV 9
LGFDSV
Sbjct: 225 LGFDSV 230


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 1 LCTLGFDSV 9
+CT FDS+
Sbjct: 113 MCTSRFDSI 121


>sp|AMT2_METJA|AMMONIUM transporter Amt2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LCTLGFD 7
LC+ GFD
Sbjct: 89 LCSKGFD 95


>sp|COME_METTH|SULFOPYRUVATE decarboxylase subunit beta|Methanothermobacter thermautotrophicus

Query: 1 LCTLGFDS 8
+C LGF S
Sbjct: 22 ICNLGFPS 29




154|Sequence|766|775|FDSVRKRMSV

>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 FDSVRKRMSV 10
FD VR+R++V
Sbjct: 77 FDDVRERVTV 86


>sp|IDI2_SULTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FDSVRKR 7
+DSVRKR
Sbjct: 361 YDSVRKR 367


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 FDSVRKRMS 9
FDS RKR +
Sbjct: 8811 FDSTRKRYA 8819


>sp|ILVC_SACS2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 2 DSVRKRM 8
+SVRKRM
Sbjct: 272 ESVRKRM 278


>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 FDSVRKRMSV 10
FD VR+R+ V
Sbjct: 76 FDDVRERVRV 85


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 2 DSVRKRM 8
D+VRKRM
Sbjct: 43 DAVRKRM 49


>sp|AMPPA_HYPBU|AMP phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 1 FDSVRKRMS 9
FD+ +KR+S
Sbjct: 89 FDAFKKRLS 97


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 FDSVRKRMSV 10
FD++ K MSV
Sbjct: 430 FDALEKGMSV 439




155|Sequence|771|780|KRMSVVVRHP

>sp|COFC_HALWD|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 SVVVRHP 10
++VVRHP
Sbjct: 224 AIVVRHP 230


>sp|TRUD_HALMA|PROBABLE tRNA pseudouridine synthase D|Haloarcula marismortui (strain ATCC

Query: 1 KRMSVVVRH 9
KR+S V RH
Sbjct: 354 KRLSTVERH 362


>sp|TRPA_METB6|TRYPTOPHAN synthase alpha chain|Methanoregula boonei (strain DSM 21154

Query: 1 KRMSVVVRH 9
+RM +VRH
Sbjct: 158 ERMDTIVRH 166


>sp|PYRB_PICTO|ASPARTATE carbamoyltransferase catalytic subunit|Picrophilus torridus (strain

Query: 5 VVVRHP 10
+VVRHP
Sbjct: 103 IVVRHP 108


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 2 RMSVVVRHP 10
R VVV HP
Sbjct: 97 RREVVVEHP 105


>sp|SYY_PYRCJ|TYROSINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KRMSVVVRHP 10
+R+S+V+R+P
Sbjct: 5 ERLSLVLRYP 14


>sp|Y772_METJA|UNCHARACTERIZED protein MJ0772|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MSVVVRHP 10
+SVV+R+P
Sbjct: 163 ISVVIRYP 170




156|Sequence|776|785|VVRHPLTGEI

>sp|PYRB_PICTO|ASPARTATE carbamoyltransferase catalytic subunit|Picrophilus torridus (strain

Query: 1 VVRHPLTG 8
VVRHPL G
Sbjct: 104 VVRHPLEG 111


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 RHPLTGE 9
RHPLTG+
Sbjct: 262 RHPLTGD 268


>sp|PYRB_THEVO|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma volcanium

Query: 1 VVRHPLTG 8
V+RHPL G
Sbjct: 104 VIRHPLEG 111


>sp|PYRB_THEAC|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma acidophilum

Query: 1 VVRHPLTG 8
V+RHPL G
Sbjct: 104 VIRHPLEG 111


>sp|SYFA_HALSA|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 700922

Query: 3 RHPLTGEI 10
RHP TGE+
Sbjct: 432 RHPETGEL 439


>sp|SYFA_HALS3|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 29341

Query: 3 RHPLTGEI 10
RHP TGE+
Sbjct: 432 RHPETGEL 439


>sp|PYRB_ARCFU|ASPARTATE carbamoyltransferase catalytic subunit|Archaeoglobus fulgidus

Query: 1 VVRHPLTG 8
V+RHPL G
Sbjct: 102 VIRHPLEG 109


>sp|PYRB_THEKO|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus kodakarensis

Query: 1 VVRHPLTG 8
V+RHP+ G
Sbjct: 105 VIRHPMEG 112


>sp|FEN_METKA|FLAP endonuclease 1|Methanopyrus kandleri (strain AV19 /

Query: 3 RHPLTGEI 10
+HP TGEI
Sbjct: 192 KHPHTGEI 199


>sp|PYRB_THEGJ|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus gammatolerans

Query: 1 VVRHPLTG 8
V+RHP+ G
Sbjct: 105 VIRHPMEG 112


>sp|PYRB_THEON|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus onnurineus

Query: 1 VVRHPLTG 8
V+RHP+ G
Sbjct: 105 VIRHPMEG 112


>sp|PGK_THEAC|PHOSPHOGLYCERATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 HPLTGEI 10
+PLTGEI
Sbjct: 28 NPLTGEI 34


>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 VVRHPLTGE 9
+V HPLTG+
Sbjct: 48 LVCHPLTGD 56


>sp|GCSH_THEVO|PROBABLE glycine cleavage system H|Thermoplasma volcanium (strain ATCC

Query: 2 VRHPLTGEI 10
V PLTGEI
Sbjct: 69 VYSPLTGEI 77


>sp|HAC8_HALAS|PRE-PROTEIN-C8 sp. (strain AS7092)

Query: 3 RHPLTGEI 10
R+P TGEI
Sbjct: 125 RNPETGEI 132


>sp|IDI2_METKA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanopyrus kandleri (strain AV19 /

Query: 4 HPLTGEI 10
HP TGEI
Sbjct: 67 HPKTGEI 73


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VVRHPLTGEI 10
V+ H LTGE+
Sbjct: 900 VLDHELTGEM 909


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VRHPLTGE 9
VR+P+TG+
Sbjct: 296 VRNPVTGD 303


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 2 VRHPLTGEI 10
+ HP+ GEI
Sbjct: 395 INHPIFGEI 403


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 VRHPLTGE 9
VR+P+TG+
Sbjct: 296 VRNPVTGD 303


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 HPLTGE 9
HPLTG+
Sbjct: 276 HPLTGD 281


>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 HPLTGE 9
HPLTG+
Sbjct: 276 HPLTGD 281


>sp|SYE_PYRAE|GLUTAMATE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 HPLTGE 9
HPLTG+
Sbjct: 276 HPLTGD 281


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 HPLTGE 9
HP+TGE
Sbjct: 203 HPVTGE 208


>sp|GCK_PICTO|GLYCERATE 2-kinase|Picrophilus torridus (strain ATCC 700027

Query: 4 HPLTGEI 10
HP TG++
Sbjct: 100 HPFTGDL 106


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 HPLTGE 9
HPLTG+
Sbjct: 269 HPLTGD 274


>sp|Y206_METKA|UPF0280 protein MK0206|Methanopyrus kandleri (strain AV19 /

Query: 4 HPLTGEI 10
HPL+G I
Sbjct: 124 HPLSGRI 130


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 4 HPLTGE 9
HPLTG+
Sbjct: 274 HPLTGD 279


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VRHPLTGEI 10
+ HP+ GEI
Sbjct: 395 ISHPIFGEI 403


>sp|PDXT_HYPBU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Hyperthermus butylicus (strain

Query: 2 VRHPLTGEI 10
+ HPL GE+
Sbjct: 157 LNHPLLGEV 165


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 HPLTGEI 10
HP+TG +
Sbjct: 122 HPMTGTV 128


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 HPLTGE 9
HP+TG+
Sbjct: 270 HPITGD 275


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VRHPLTGEI 10
+ HP+ GEI
Sbjct: 399 IPHPIFGEI 407


>sp|CAPPA_METAC|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 HPLTGEI 10
HP+TG +
Sbjct: 122 HPMTGTV 128


>sp|PYRB_PYRHO|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus horikoshii

Query: 1 VVRHPLTG 8
V+RHP G
Sbjct: 105 VIRHPKEG 112


>sp|PYRB_METVS|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus vannielii

Query: 1 VVRHPLTG 8
V+RHP G
Sbjct: 101 VIRHPSEG 108


>sp|PYRB_PYRFU|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus furiosus (strain

Query: 1 VVRHPLTG 8
V+RHP G
Sbjct: 105 VIRHPKEG 112


>sp|PYRB_PYRAB|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus abyssi (strain

Query: 1 VVRHPLTG 8
V+RHP G
Sbjct: 105 VIRHPKEG 112


>sp|PYRB_METTP|ASPARTATE carbamoyltransferase catalytic subunit|Methanothrix

Query: 1 VVRHPLTG 8
V+RHP G
Sbjct: 103 VIRHPKEG 110




157|Sequence|781|790|LTGEIVVYTK

>sp|Y905_ARCFU|UPF0292 protein AF_0905|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LTGEIVVYT 9
++GEIVV+T
Sbjct: 40 VSGEIVVFT 48


>sp|RPO5_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo5|Sulfurisphaera tokodaii (strain DSM

Query: 1 LTGEIVVY 8
L+GE+VVY
Sbjct: 71 LSGEVVVY 78


>sp|Y2352_ARCFU|UNCHARACTERIZED protein AF_2352|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LTGEIVVY 8
LTG IVVY
Sbjct: 51 LTGNIVVY 58


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 2 TGEIVVYT 9
TGE VV+T
Sbjct: 120 TGEAVVFT 127


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 4 EIVVYTK 10
E+V+YTK
Sbjct: 32 EVVIYTK 38


>sp|FWDD_METJA|PROTEIN FwdD|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GEIVVYTK 10
GE+VVY K
Sbjct: 58 GEVVVYVK 65


>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LTGEIVVYTK 10
L GEIV Y +
Sbjct: 294 LDGEIVAYAE 303


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LTGEIVVYTK 10
L GEIV Y +
Sbjct: 293 LDGEIVAYAE 302


>sp|ABLB_METMA|BETA-LYSINE N(6)-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GEIVVYT 9
G+I+VYT
Sbjct: 24 GKIIVYT 30


>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 2 TGEIVVYTK 10
TGE V+Y K
Sbjct: 202 TGERVIYNK 210


>sp|RPO3_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum calidifontis (strain DSM

Query: 2 TGEIVVY 8
TG++VVY
Sbjct: 102 TGDVVVY 108


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 1 LTGEIVVYT 9
L+GE V+YT
Sbjct: 53 LSGEKVLYT 61


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 3 GEIVVY 8
GEIVVY
Sbjct: 314 GEIVVY 319




158|Sequence|786|795|VVYTKGADSV

>sp|DEOC_AERPE|DEOXYRIBOSE-PHOSPHATE aldolase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VYTKGADSV 10
VYTKG D V
Sbjct: 172 VYTKGGDPV 180


>sp|TRPC_METTM|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 2 VYTKGADSV 10
VY +GAD+V
Sbjct: 76 VYREGADAV 84


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 1 VVYTKGADS 9
+VYT G+DS
Sbjct: 386 IVYTGGSDS 394


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 1 VVYTKGADS 9
+VYT G+DS
Sbjct: 386 IVYTGGSDS 394


>sp|Y524_METJA|UNCHARACTERIZED protein MJ0524|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YTKGADSV 10
YT+G D+V
Sbjct: 130 YTRGMDTV 137


>sp|Y1987_ARCFU|UNCHARACTERIZED protein AF_1987|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VYTKGADSV 10
+YTK DSV
Sbjct: 114 IYTKKGDSV 122


>sp|NURA_SACS2|DNA double-strand break repair nuclease|Saccharolobus solfataricus

Query: 1 VVYTKGADSV 10
+VY GA+SV
Sbjct: 70 IVYAVGAESV 79


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VYTKGAD 8
VYT GAD
Sbjct: 844 VYTGGAD 850




159|Sequence|791|800|GADSVIMDLL

>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GADSVIMDL 9
GAD+V+MD+
Sbjct: 272 GADNVVMDI 280


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GADSVIMDL 9
GAD+V+MD+
Sbjct: 273 GADNVVMDI 281


>sp|TOP6A_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ADSVIMDL 9
+DSVIMD+
Sbjct: 133 SDSVIMDI 140


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ADSVIMDLL 10
A+ VIMDLL
Sbjct: 1127 AEDVIMDLL 1135


>sp|IF5A_HALWD|TRANSLATION initiation factor 5A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GADSVIMDL 9
G+D+ IMDL
Sbjct: 82 GSDAQIMDL 90


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GADSVIMDL 9
GAD V+MD+
Sbjct: 273 GADHVVMDI 281


>sp|AROE_METMP|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain DSM 14266

Query: 3 DSVIMDLL 10
D+V+MDL+
Sbjct: 216 DAVVMDLI 223


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GADSVIMDL 9
GA++V+MD+
Sbjct: 272 GAENVVMDI 280


>sp|AROA_THEVO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 DSVIMDLL 10
DSVI+DL
Sbjct: 256 DSVILDLF 263


>sp|AROE_META3|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus aeolicus (strain ATCC

Query: 3 DSVIMDLL 10
D+V+MDL+
Sbjct: 216 DAVVMDLI 223


>sp|ARADH_HALVD|L-ARABINOSE 1-dehydrogenase (NAD(P)(+))|Haloferax volcanii (strain ATCC 29605

Query: 1 GADSVIMDL 9
G DSVI+D+
Sbjct: 37 GLDSVILDV 45


>sp|AROE_METM7|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain C7 /

Query: 3 DSVIMDLL 10
D+V+MDL+
Sbjct: 216 DAVVMDLI 223




160|Sequence|796|805|IMDLLEDPAC

>sp|UPPS_SACS2|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Saccharolobus

Query: 1 IMDLLEDP 8
I DLLEDP
Sbjct: 108 IQDLLEDP 115


>sp|HMGCS_METBU|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IMDLLEDP 8
++DLL+DP
Sbjct: 324 VLDLLKDP 331


>sp|RL2_STAMF|LARGE ribosomal subunit protein uL2|Staphylothermus marinus (strain

Query: 1 IMDLLEDPA 9
I+DLL DP
Sbjct: 43 IIDLLHDPG 51


>sp|AROA_METPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaerula palustris (strain ATCC

Query: 5 LEDPAC 10
+EDPAC
Sbjct: 400 IEDPAC 405


>sp|RL10_IGNH4|LARGE ribosomal subunit protein uL10|Ignicoccus hospitalis (strain

Query: 1 IMDLLEDPA 9
++DL+E PA
Sbjct: 39 VLDLVETPA 47


>sp|SAT_HYPBU|SULFATE adenylyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 MDLLEDP 8
+DL+EDP
Sbjct: 155 IDLIEDP 161


>sp|RL2_META3|LARGE ribosomal subunit protein uL2|Methanococcus aeolicus (strain ATCC

Query: 1 IMDLLEDPA 9
I+D+L DP
Sbjct: 46 IIDILHDPG 54


>sp|OTC_HYPBU|ORNITHINE carbamoyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 MDLLEDPA 9
++L+EDPA
Sbjct: 213 IELIEDPA 220


>sp|PGK2_PYRHO|2-PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 MDLLEDP 8
+DLLE+P
Sbjct: 295 LDLLEEP 301


>sp|RL2_METJA|LARGE ribosomal subunit protein uL2|Methanocaldococcus jannaschii

Query: 1 IMDLLEDPA 9
I+D+L DP
Sbjct: 46 IVDILHDPG 54


>sp|FBPAP_PYRNV|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 MDLLEDPA 9
+DL +DPA
Sbjct: 318 VDLFDDPA 325


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 3 DLLEDP 8
DL+EDP
Sbjct: 230 DLIEDP 235


>sp|CCA_THEAC|CCA-ADDING enzyme|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 LLEDPAC 10
L+E PAC
Sbjct: 323 LIETPAC 329


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 1 IMDLLEDP 8
I+DL +DP
Sbjct: 90 ILDLFQDP 97


>sp|FBPAP_THEON|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus onnurineus (strain NA1)

Query: 2 MDLLEDPA 9
+DL +DPA
Sbjct: 317 VDLFDDPA 324


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 LEDPAC 10
LEDP C
Sbjct: 168 LEDPRC 173


>sp|FBPAP_THEKO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 MDLLEDPA 9
+DL +DPA
Sbjct: 317 VDLFDDPA 324


>sp|ASSY_METTH|ARGININOSUCCINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 DLLEDP 8
D+LEDP
Sbjct: 188 DILEDP 193


>sp|KPRS_METTH|RIBOSE-PHOSPHATE pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 1 IMDLLEDPAC 10
+ DLL++P C
Sbjct: 15 VADLLDEPLC 24




161|Sequence|801|810|EDPACVPDIN

>sp|Y1199_ARCFU|UNCHARACTERIZED protein AF_1199|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PACVPDI 9
PAC PD+
Sbjct: 297 PACFPDV 303


>sp|AROA_METPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 EDPACV 6
EDPACV
Sbjct: 401 EDPACV 406


>sp|RS3_HALWD|SMALL ribosomal subunit protein uS3|Haloquadratum walsbyi (strain DSM

Query: 1 EDPACVPDIN 10
EDPA +PD+
Sbjct: 219 EDPADIPDVG 228


>sp|RL10_HALMA|LARGE ribosomal subunit protein uL10|Haloarcula marismortui (strain ATCC

Query: 1 EDPACVPDI 9
EDP VPD+
Sbjct: 262 EDPEVVPDL 270


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 2 DPACVPDIN 10
DPA V DIN
Sbjct: 177 DPAFVIDIN 185


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 2 DPACVPDIN 10
DPA V DIN
Sbjct: 177 DPAFVIDIN 185


>sp|GMS_METOI|GMGT synthase|Methanothermococcus okinawensis (strain DSM 14208

Query: 1 EDPACV 6
EDP C+
Sbjct: 455 EDPGCI 460


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DPACVP 7
DPAC P
Sbjct: 341 DPACNP 346


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 EDPACVPDIN 10
EDP V D+N
Sbjct: 171 EDPIAVVDMN 180


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EDPACVPDIN 10
EDP V D+N
Sbjct: 171 EDPIAVVDMN 180


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 EDPACVPDIN 10
EDP V D+N
Sbjct: 171 EDPIAVVDMN 180


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EDPACVPDIN 10
EDP V D+N
Sbjct: 171 EDPIAVVDMN 180


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EDPACVPDIN 10
EDP V D+N
Sbjct: 171 EDPIAVVDMN 180


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 1 EDPACVPDIN 10
EDP V D+N
Sbjct: 171 EDPIAVVDMN 180


>sp|MFNA_METB6|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoregula boonei (strain

Query: 3 PACVPDIN 10
PA PD+N
Sbjct: 310 PAASPDVN 317


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 2 DPACVP 7
DPAC P
Sbjct: 341 DPACNP 346


>sp|ANTRB_HALVD|PUTATIVE ABC transporter anion-binding protein|Haloferax volcanii (strain

Query: 2 DPACVPDIN 10
+PA PD+N
Sbjct: 255 NPAKYPDVN 263


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 1 EDPACVPDIN 10
EDP + D+N
Sbjct: 171 EDPIAIVDMN 180


>sp|KHSE_HALMA|HOMOSERINE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 4 ACVPDI 9
AC+PDI
Sbjct: 159 ACLPDI 164


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 2 DPACVPD 8
DPA +PD
Sbjct: 390 DPAALPD 396




162|Sequence|806|815|VPDINMEKKL

>sp|IF6_METM6|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain C6 /

Query: 1 VPDINMEKKL 10
VPDI EK++
Sbjct: 70 VPDITTEKEV 79


>sp|XYLG_SULAC|XYLOSE/ARABINOSE import ATP-binding protein XylG|Sulfolobus acidocaldarius (strain

Query: 1 VPDINME 7
+PDINM+
Sbjct: 132 IPDINMK 138


>sp|IF6_METM7|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain C7 /

Query: 1 VPDINMEKKL 10
VPDI EK++
Sbjct: 70 VPDITTEKEV 79


>sp|IF6_METM5|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain C5 /

Query: 1 VPDINMEKKL 10
VPDI EK++
Sbjct: 70 VPDITTEKEV 79


>sp|MTAP_PYRAE|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VPDINMEKKL 10
VP+IN+ ++L
Sbjct: 205 VPEINLAREL 214


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 VPDINMEKK 9
VP+IN E+K
Sbjct: 172 VPEINGEQK 180


>sp|IF6_METMP|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain DSM 14266

Query: 1 VPDINMEKKL 10
VP+I EK+L
Sbjct: 70 VPNITTEKEL 79


>sp|ACDD_METTH|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanothermobacter

Query: 1 VPDINMEKKL 10
+ D+NM+K L
Sbjct: 240 ITDVNMQKTL 249


>sp|CHEC1_HALS3|PUTATIVE CheY-P phosphatase CheC1|Halobacterium salinarum (strain ATCC 29341

Query: 2 PDINMEKKL 10
PD N+E K+
Sbjct: 171 PDANVEAKI 179


>sp|EF1B_METB6|ELONGATION factor 1-beta|Methanoregula boonei (strain DSM 21154

Query: 2 PDINMEK 8
PDI++EK
Sbjct: 15 PDIDLEK 21


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPDINMEKKL 10
+PD++ ++KL
Sbjct: 510 IPDVDTKRKL 519


>sp|MTAP_PYRAB|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 1 VPDINMEKKL 10
VP++N+ ++L
Sbjct: 183 VPEVNLAREL 192


>sp|RIFK_METAC|RIBOFLAVIN kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VPDINMEKKL 10
VPDI KKL
Sbjct: 13 VPDIEYLKKL 22


>sp|MTAP_PYRHO|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VPDINMEKKL 10
VP++N+ ++L
Sbjct: 183 VPEVNLAREL 192


>sp|MTAP_THEKO|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VPDINMEKKL 10
VP++N+ ++L
Sbjct: 183 VPEVNLAREL 192




163|Sequence|811|820|MEKKLRKIRA

>sp|CIMA_METPE|PUTATIVE (R)-citramalate synthase CimA|Methanosphaerula palustris (strain

Query: 1 MEKKLRKIRA 10
++KKLRK RA
Sbjct: 107 IQKKLRKDRA 116


>sp|RFCS_PICTO|REPLICATION factor C small subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 MEKKLRKI 8
ME+KLR+I
Sbjct: 164 MERKLREI 171


>sp|SYH_METMP|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 MEKKLRKI 8
+EKKLRK+
Sbjct: 22 IEKKLRKV 29


>sp|SYH_METM5|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 MEKKLRKI 8
+EKKLRK+
Sbjct: 24 IEKKLRKV 31


>sp|SYH_METM7|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 MEKKLRKI 8
+EKKLRK+
Sbjct: 24 IEKKLRKV 31


>sp|SYH_METM6|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 MEKKLRKI 8
+EKKLRK+
Sbjct: 24 IEKKLRKV 31


>sp|RPE_METJA|RIBULOSE-PHOSPHATE 3-epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MEKKLRKIRA 10
M KK+RK+++
Sbjct: 149 MTKKIRKLKS 158


>sp|Y1349_METJA|UNCHARACTERIZED protein MJ1349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MEKKLRKI 8
MEKKL+K+
Sbjct: 185 MEKKLKKL 192


>sp|RS8E_METS3|SMALL ribosomal subunit protein eS8|Methanobrevibacter smithii (strain

Query: 2 EKKLRKIR 9
EK+L+KIR
Sbjct: 39 EKRLKKIR 46




164|Sequence|816|825|RKIRARTQKH

***** No hits found ******


165|Sequence|821|830|RTQKHLDLYA

>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 RTQKHLDLYA 10
RT HL LYA
Sbjct: 210 RTGNHLGLYA 219


>sp|ENO_META3|ENOLASE aeolicus (strain ATCC BAA-1280

Query: 1 RTQKHLDLY 9
RTQ+ +D Y
Sbjct: 86 RTQREIDTY 94


>sp|PGK_METS5|PHOSPHOGLYCERATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 3 QKHLDL 8
QKHLD+
Sbjct: 81 QKHLDM 86


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RTQKHLDLY 9
+T+K +D+Y
Sbjct: 393 KTEKFIDIY 401


>sp|CDC65_HALSA|ORC1-TYPE DNA replication protein 5|Halobacterium salinarum (strain ATCC

Query: 2 TQKHLDLYA 10
TQK + LYA
Sbjct: 307 TQKKISLYA 315


>sp|LYSX_SACS2|ALPHA-AMINOADIPATE--LYSW ligase LysX|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TQKHLDLY 9
TQK+ D+Y
Sbjct: 151 TQKYKDIY 158




166|Sequence|826|835|LDLYARDGLR

>sp|PURA_THEVO|ADENYLOSUCCINATE synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DLYARDGLR 10
D YAR GLR
Sbjct: 145 DKYARSGLR 153


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 1 LDLYARDGLR 10
L + RDGLR
Sbjct: 343 LKIMGRDGLR 352


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DLYARDGLR 10
++YA+ GLR
Sbjct: 79 EIYAKKGLR 87


>sp|PURA_THEAC|ADENYLOSUCCINATE synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DLYARDGLR 10
D YAR G+R
Sbjct: 144 DKYARTGIR 152


>sp|Y658_METJA|UNCHARACTERIZED protein MJ0658|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LYARDG 8
+YARDG
Sbjct: 281 IYARDG 286


>sp|MTRE_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus vannielii (strain ATCC

Query: 1 LDLYARDGLR 10
+D+YA G+R
Sbjct: 210 IDIYAEYGIR 219


>sp|RL18E_THEAC|LARGE ribosomal subunit protein eL18|Thermoplasma acidophilum (strain

Query: 1 LDLYARDG 8
+D YA+DG
Sbjct: 52 IDKYAKDG 59


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 3 LYARDG 8
LYARDG
Sbjct: 255 LYARDG 260


>sp|SURE_CALMQ|5'-NUCLEOTIDASE SurE|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LDLYARDG 8
+D+YA DG
Sbjct: 65 VDVYATDG 72


>sp|G3P_HALMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DLYARDG 8
DLYA DG
Sbjct: 49 DLYAADG 55


>sp|MTRE_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus maripaludis (strain DSM

Query: 1 LDLYARDGLR 10
+D+YA G+R
Sbjct: 210 IDIYAEYGVR 219


>sp|MTRE_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus maripaludis (strain C7

Query: 1 LDLYARDGLR 10
+D+YA G+R
Sbjct: 210 IDIYAEYGVR 219


>sp|MTRE_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus maripaludis (strain C5

Query: 1 LDLYARDGLR 10
+D+YA G+R
Sbjct: 210 IDIYAEYGVR 219


>sp|MCRY_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 LDLYARDG 8
+DLY DG
Sbjct: 8 IDLYGADG 15


>sp|MCRY_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 LDLYARDG 8
+DLY DG
Sbjct: 8 IDLYGADG 15


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 1 LDLYARDG 8
LD++ RDG
Sbjct: 70 LDVFVRDG 77




167|Sequence|831|840|RDGLRTLCIA

>sp|MDH_METJA|L-MALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DGLRTLCIA 10
DG+R +CI
Sbjct: 262 DGIRDVCIG 270


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DGLRTLCIA 10
DGLR C+A
Sbjct: 220 DGLRPGCLA 228


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 DGLRTLCIA 10
DG+R CIA
Sbjct: 221 DGMRPGCIA 229


>sp|THIC1_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DGLRTLCIA 10
DG+R CIA
Sbjct: 221 DGMRPGCIA 229


>sp|PURP_IGNH4|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Ignicoccus hospitalis (strain KIN4/I

Query: 1 RDGLRTLCI 9
++GLRTL I
Sbjct: 34 KEGLRTLLI 42


>sp|GATA_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Natronomonas pharaonis (strain ATCC

Query: 2 DGLRTLC 8
DG+RT C
Sbjct: 34 DGVRTTC 40


>sp|THIC1_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DGLRTLCIA 10
DG+R CIA
Sbjct: 221 DGMRPGCIA 229


>sp|THIC2_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 DGLRTLCIA 10
DGLR C+A
Sbjct: 225 DGLRPGCLA 233


>sp|MDH_METKA|MALATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 DGLRTLCIA 10
DG+R +CI
Sbjct: 262 DGIRDVCIG 270


>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 DGLRTLC 8
+GLR LC
Sbjct: 298 EGLRVLC 304


>sp|MDH_METTM|MALATE dehydrogenase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 DGLRTLCIA 10
DG+R +C+
Sbjct: 267 DGIRDVCLG 275


>sp|MDH_METTH|MALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 DGLRTLCIA 10
DG+R +C+
Sbjct: 267 DGIRDVCLG 275




168|Sequence|836|845|TLCIAKKVVS

>sp|COFE_NATPD|COENZYME F420:L-glutamate ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LCIAKKVVS 10
LC+A +VS
Sbjct: 34 LCVASTIVS 42


>sp|IDI2_METTP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LCIAKKVVS 10
+C+ K+VVS
Sbjct: 13 ICLKKEVVS 21


>sp|IF1A_SACS2|TRANSLATION initiation factor 1A|Saccharolobus solfataricus (strain ATCC

Query: 1 TLCIAKKVV 9
T+C+ KK++
Sbjct: 23 TICVVKKML 31


>sp|IF1A_SACI7|TRANSLATION initiation factor 1A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 TLCIAKKVV 9
T+C+ KK++
Sbjct: 23 TICVVKKML 31


>sp|IF1A_SACI6|TRANSLATION initiation factor 1A|Saccharolobus islandicus (strain M.16.4 /

Query: 1 TLCIAKKVV 9
T+C+ KK++
Sbjct: 23 TICVVKKML 31


>sp|IF1A_SACI4|TRANSLATION initiation factor 1A|Saccharolobus islandicus (strain M.14.25 /

Query: 1 TLCIAKKVV 9
T+C+ KK++
Sbjct: 23 TICVVKKML 31


>sp|IF1A_SACI3|TRANSLATION initiation factor 1A|Saccharolobus islandicus (strain M.16.27)

Query: 1 TLCIAKKVV 9
T+C+ KK++
Sbjct: 23 TICVVKKML 31


>sp|IF1A_SACI2|TRANSLATION initiation factor 1A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 TLCIAKKVV 9
T+C+ KK++
Sbjct: 23 TICVVKKML 31


>sp|IF1A_SACI1|TRANSLATION initiation factor 1A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 TLCIAKKVV 9
T+C+ KK++
Sbjct: 23 TICVVKKML 31




169|Sequence|841|850|KKVVSEEDFR

>sp|GGGPS_IGNH4|GERANYLGERANYLGLYCERYL phosphate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KVVSEEDF 9
KV+SEED+
Sbjct: 23 KVISEEDY 30


>sp|Y078_THEAC|UPF0284 protein Ta0078|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KKVVSEEDFR 10
KK V+EE FR
Sbjct: 190 KKKVAEESFR 199


>sp|PYRH_METKA|URIDYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 3 VVSEEDFR 10
VVS EDFR
Sbjct: 197 VVSWEDFR 204


>sp|BIOF_META3|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus aeolicus (strain ATCC

Query: 5 SEEDFR 10
SEEDFR
Sbjct: 359 SEEDFR 364


>sp|Y1573_ARCFU|UNCHARACTERIZED protein AF_1573|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VSEEDFR 10
++EEDFR
Sbjct: 58 ITEEDFR 64


>sp|Y971_METJA|UNCHARACTERIZED protein MJ0971|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKVVSEEDFR 10
KK+ S EDF+
Sbjct: 226 KKINSLEDFK 235


>sp|Y096_ARCFU|UNCHARACTERIZED protein AF_0096|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VSEEDFR 10
++EEDFR
Sbjct: 31 ITEEDFR 37


>sp|DHYS_METS5|PROBABLE deoxyhypusine synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KKVVSEEDFR 10
K++VSE D R
Sbjct: 47 KRIVSECDLR 56


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KKVVSEEDF 9
KK++ EED
Sbjct: 368 KKIIKEEDL 376


>sp|CAS1A_METRM|CRISPR-ASSOCIATED protein Cas1 1|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 KKVVSEEDF 9
KK+++E+DF
Sbjct: 246 KKMITEKDF 254


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain

Query: 2 KVVSEEDFR 10
KV+S++ FR
Sbjct: 58 KVISDKSFR 66




170|Sequence|846|855|EEDFRRWASF

>sp|DHSD_NATPH|SUCCINATE dehydrogenase hydrophobic membrane anchor|Natronomonas pharaonis

Query: 2 EDFRRWASF 10
EDF RW F
Sbjct: 11 EDFGRWQEF 19


>sp|CS2H_ACIS1|CARBON disulfide hydrolase|Acidianus sp. (strain A1-3)

Query: 1 EEDFRRWASF 10
EEDF +W F
Sbjct: 129 EEDFIKWFKF 138


>sp|IF2P_METAR|PROBABLE translation initiation factor IF-2|Methanocella arvoryzae (strain

Query: 2 EDFRRWAS 9
+DFR+W +
Sbjct: 443 DDFRKWET 450


>sp|UBIX_ARCFU|FLAVIN prenyltransferase UbiX|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEDFRRWA 8
E D+RRW
Sbjct: 175 EVDYRRWG 182


>sp|GUAAB_METMJ|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoculleus

Query: 2 EDFRRWASF 10
E+FR W F
Sbjct: 221 EEFRPWQCF 229


>sp|Y1356_METJA|UNCHARACTERIZED protein MJ1356|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEDFRRW 7
EEDF+ W
Sbjct: 70 EEDFKNW 76


>sp|DHSD_HALSA|SUCCINATE dehydrogenase hydrophobic membrane anchor|Halobacterium salinarum

Query: 3 DFRRWASF 10
DF RW F
Sbjct: 12 DFGRWTEF 19


>sp|XERA_SACS2|TYROSINE recombinase XerA|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EDFRRWAS 9
ED RW S
Sbjct: 56 EDLNRWIS 63


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EEDFRRW 7
+EDF+ W
Sbjct: 156 DEDFKYW 162


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 2 EDFRRW 7
EDF +W
Sbjct: 450 EDFEKW 455


>sp|CS2H_SACS2|CARBON disulfide hydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EDFRRWASF 10
EDF +W F
Sbjct: 130 EDFTKWFKF 138


>sp|AROE_THEKO|SHIKIMATE dehydrogenase (NADP(+))|Thermococcus kodakarensis (strain ATCC

Query: 2 EDFRRWASF 10
E FR W F
Sbjct: 247 ESFRLWTGF 255


>sp|GADH_PICTO|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Picrophilus torridus (strain ATCC 700027

Query: 1 EEDFRRWA 8
E+ F+RW+
Sbjct: 48 EDAFKRWS 55


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 DFRRWA 8
DFR WA
Sbjct: 33 DFRAWA 38


>sp|Y998_METJA|UNCHARACTERIZED protein MJ0998|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEDFRRW 7
+E+F++W
Sbjct: 170 QEEFKKW 176


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EDFRRWA 8
+D R+WA
Sbjct: 32 QDLRKWA 38


>sp|Y1680_ARCFU|UNCHARACTERIZED protein AF_1680|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EDFRRWASF 10
EDFR + F
Sbjct: 125 EDFREYPDF 133


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEDFRRW 7
E+DF+ W
Sbjct: 154 EDDFKYW 160


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EEDFRRWASF 10
+ED ++W F
Sbjct: 392 DEDVKKWLKF 401




171|Sequence|851|860|RWASFRREAE

>sp|EF1A_METMJ|ELONGATION factor 1-alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 SFRREAE 10
SFR+EAE
Sbjct: 41 SFRKEAE 47


>sp|OTC_THEKO|ORNITHINE carbamoyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WASFRREAE 10
WAS +EAE
Sbjct: 232 WASMGQEAE 240


>sp|OTC_PYRAB|ORNITHINE carbamoyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 WASFRREAE 10
WAS +EAE
Sbjct: 232 WASMGQEAE 240


>sp|OTC_PYRHO|ORNITHINE carbamoyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WASFRREAE 10
WAS +EAE
Sbjct: 232 WASMGQEAE 240


>sp|OTCA_PYRFU|ORNITHINE carbamoyltransferase, anabolic|Pyrococcus furiosus (strain ATCC

Query: 2 WASFRREAE 10
WAS +EAE
Sbjct: 232 WASMGQEAE 240


>sp|SYFA_THEON|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus onnurineus (strain NA1)

Query: 2 WASFRRE 8
WAS R+E
Sbjct: 114 WASIRKE 120


>sp|DEOC_PYRAR|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RWASFRRE 8
RWA RR+
Sbjct: 96 RWADVRRD 103




172|Sequence|856|865|RREAEASLDN

>sp|PCCA_HALMT|PROPIONYL-COA carboxylase, biotin carboxylase and|Haloferax mediterranei (strain

Query: 1 RREAEASLDN 10
+RE EA DN
Sbjct: 185 KREGEAYFDN 194




173|Sequence|861|870|ASLDNRDELL

>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 4 DNRDELL 10
DNR+ELL
Sbjct: 293 DNREELL 299


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 LDNRDEL 9
LD+RDEL
Sbjct: 324 LDDRDEL 330


>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SLDNRDELL 10
+L+NRD+LL
Sbjct: 322 TLENRDKLL 330


>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 LDNRDELL 10
LD+RDE L
Sbjct: 551 LDDRDETL 558


>sp|NTPTH_METKA|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanopyrus kandleri (strain AV19 /

Query: 2 SLDNRDEL 9
+L NRDEL
Sbjct: 158 TLSNRDEL 165


>sp|CYDE_METJA|L-CYSTEINE desulfidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SLDNRDELL 10
SLD +DE+L
Sbjct: 196 SLDLKDEIL 204


>sp|CBIZ_HALSA|ADENOSYLCOBINAMIDE amidohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ASLDNRD 7
ASLD+RD
Sbjct: 200 ASLDSRD 206


>sp|ARGC_METST|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 SLDNRDELL 10
SLD+ DEL+
Sbjct: 295 SLDDEDELV 303




174|Sequence|866|875|RDELLMETAQ

>sp|TFE_NATPD|TRANSCRIPTION factor E|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RDELLMETAQ 10
RDEL +ETA+
Sbjct: 165 RDELHVETAE 174


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 1 RDELLMETAQ 10
+DE +ME+ Q
Sbjct: 434 KDEFIMESLQ 443


>sp|SYW_THEON|TRYPTOPHAN--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 DELLMETAQ 10
DELL +TAQ
Sbjct: 31 DELLEKTAQ 39


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 1 RDELLMETAQ 10
+D+L++ETA+
Sbjct: 486 KDKLILETAR 495


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RDELLMETAQ 10
+D+L++ETA+
Sbjct: 486 KDKLVLETAR 495


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RDELLMETAQ 10
+D+L++ETA+
Sbjct: 486 KDKLVLETAR 495


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 1 RDELLMETAQ 10
+D+L++ETA+
Sbjct: 486 KDKLVLETAR 495


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RDELLMETAQ 10
+D+L++ETA+
Sbjct: 486 KDKLVLETAR 495


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RDELLMETAQ 10
+D+L++ETA+
Sbjct: 486 KDKLVLETAR 495


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RDELLMETAQ 10
+D+L++ETA+
Sbjct: 486 KDKLVLETAR 495




175|Sequence|871|880|METAQHLENQ

>sp|CPGS_THESM|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus sibiricus (strain

Query: 2 ETAQHLENQ 10
+ A+HLEN+
Sbjct: 341 KAARHLENR 349


>sp|OTC_STAMF|ORNITHINE carbamoyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 METAQHLENQ 10
+ETA+HL+ +
Sbjct: 25 LETAKHLKQR 34




176|Sequence|876|885|HLENQLTLLG

>sp|SYR_METM5|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 LENQLTLLG 10
LEN L LLG
Sbjct: 551 LENTLDLLG 559


>sp|SYR_METM6|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 LENQLTLLG 10
LEN L LLG
Sbjct: 551 LENTLDLLG 559


>sp|SYR_METM7|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 LENQLTLLG 10
LEN L LLG
Sbjct: 551 LENTLDLLG 559


>sp|SYR_METVS|ARGININE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LENQLTLLG 10
LEN L LLG
Sbjct: 554 LENSLDLLG 562


>sp|SYR_METMP|ARGININE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LENQLTLLG 10
LEN L LLG
Sbjct: 551 LENTLDLLG 559


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 HLENQLTLL 9
H+E QLT L
Sbjct: 170 HVEEQLTQL 178


>sp|RL10_NATPD|LARGE ribosomal subunit protein uL10|Natronomonas pharaonis (strain

Query: 1 HLENQLTLLG 10
H+E Q+ L+G
Sbjct: 83 HVEGQVGLIG 92


>sp|SYR_META3|ARGININE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LENQLTLLG 10
+EN L LLG
Sbjct: 559 IENALNLLG 567




177|Sequence|881|890|LTLLGATGIE

>sp|CBID_SULTO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LTLLGATGIE 10
+++LG TGIE
Sbjct: 163 ISILGTTGIE 172


>sp|CBID_THEAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LTLLGATGIE 10
+++LG TGIE
Sbjct: 167 ISILGTTGIE 176


>sp|CBID_SACI2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LTLLGATGIE 10
+++LG TGIE
Sbjct: 165 ISILGTTGIE 174


>sp|CBID_SACI1|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LTLLGATGIE 10
+++LG TGIE
Sbjct: 165 ISILGTTGIE 174


>sp|CBID_SACS2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 LTLLGATGIE 10
+++LG TGIE
Sbjct: 165 ISILGTTGIE 174


>sp|CBID_SACI7|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LTLLGATGIE 10
+++LG TGIE
Sbjct: 165 ISILGTTGIE 174


>sp|CBID_SACI6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LTLLGATGIE 10
+++LG TGIE
Sbjct: 165 ISILGTTGIE 174


>sp|CBID_SACI4|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LTLLGATGIE 10
+++LG TGIE
Sbjct: 165 ISILGTTGIE 174


>sp|CBID_SACI3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 LTLLGATGIE 10
+++LG TGIE
Sbjct: 165 ISILGTTGIE 174


>sp|CBID_THEVO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LTLLGATGIE 10
+++LG TGIE
Sbjct: 178 ISVLGTTGIE 187


>sp|CBID_PYRAE|COBALT-PRECORRIN-5B C(1)-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LTLLGATGIE 10
+++LG TGIE
Sbjct: 160 ISILGTTGIE 169


>sp|COFH_METJA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocaldococcus jannaschii (strain

Query: 5 GATGIE 10
GATGIE
Sbjct: 264 GATGIE 269


>sp|RNFD_METAC|ION-TRANSLOCATING oxidoreductase complex subunit D|Methanosarcina acetivorans

Query: 2 TLLGATGIE 10
++LGA GIE
Sbjct: 51 SILGAVGIE 59


>sp|CBID_SULAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LTLLGATGIE 10
+++LG TGIE
Sbjct: 170 ISILGTTGIE 179


>sp|CBID_METJA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LTLLGATGI 9
L++LG TGI
Sbjct: 170 LSILGTTGI 178


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 2 TLLGATG 8
TLLG TG
Sbjct: 49 TLLGVTG 55


>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 2 TLLGATG 8
TLLG TG
Sbjct: 35 TLLGVTG 41


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 TLLGATG 8
TLLG TG
Sbjct: 35 TLLGVTG 41


>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 2 TLLGATG 8
TLLG TG
Sbjct: 39 TLLGVTG 45


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TLLGATG 8
TLLG TG
Sbjct: 61 TLLGVTG 67


>sp|UVRB_METAC|UVRABC system protein B|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TLLGATG 8
TLLG TG
Sbjct: 61 TLLGVTG 67


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 2 TLLGATG 8
TLLG TG
Sbjct: 50 TLLGVTG 56


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 2 TLLGATG 8
TLLG TG
Sbjct: 50 TLLGVTG 56


>sp|MTMC2_METAC|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TLLGATGIE 10
T+LGA G E
Sbjct: 115 TMLGANGFE 123


>sp|MPTA_ARCFU|GTP cyclohydrolase MptA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LTLLGATGIE 10
L+ +GATGI+
Sbjct: 16 LSRVGATGIK 25




178|Sequence|886|895|ATGIEDRLQE

>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ATGIEDRLQ 9
A G+EDRL+
Sbjct: 274 AAGMEDRLE 282


>sp|NADB_PYRFU|L-ASPARTATE oxidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ATGIED 6
ATGIED
Sbjct: 269 ATGIED 274


>sp|Y811_METJA|UNCHARACTERIZED protein MJ0811|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GIEDRLQE 10
G+ED+L+E
Sbjct: 130 GLEDKLKE 137




179|Sequence|891|900|DRLQEGVPDT

>sp|VHCG_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit G|Archaeoglobus profundus (strain

Query: 2 RLQEGVPD 9
R+ EG+PD
Sbjct: 221 RMHEGIPD 228


>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DRLQEGVPDT 10
DR++ G PDT
Sbjct: 174 DRIKPGKPDT 183


>sp|RL10E_CALMQ|LARGE ribosomal subunit protein uL16|Caldivirga maquilingensis (strain

Query: 1 DRLQEGV 7
DRLQEG+
Sbjct: 109 DRLQEGM 115


>sp|RL10E_PYRNV|LARGE ribosomal subunit protein uL16|Pyrobaculum neutrophilum (strain DSM

Query: 1 DRLQEGV 7
DRLQEG+
Sbjct: 110 DRLQEGM 116


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DRLQEGVPD 9
DR++EG+ D
Sbjct: 1685 DRIEEGIED 1693


>sp|RL10E_PYRIL|LARGE ribosomal subunit protein uL16|Pyrobaculum islandicum (strain DSM

Query: 1 DRLQEGV 7
DRLQEG+
Sbjct: 110 DRLQEGM 116


>sp|RL10E_PYRCJ|LARGE ribosomal subunit protein uL16|Pyrobaculum calidifontis (strain DSM

Query: 1 DRLQEGV 7
DRLQEG+
Sbjct: 110 DRLQEGM 116


>sp|RL10E_PYRAE|LARGE ribosomal subunit protein uL16|Pyrobaculum aerophilum (strain ATCC

Query: 1 DRLQEGV 7
DRLQEG+
Sbjct: 110 DRLQEGM 116


>sp|HDLC_ARCPA|HETERODISULFIDE reductase subunit C-like protein|Archaeoglobus profundus (strain

Query: 1 DRLQEGVPD 9
+ ++EGVPD
Sbjct: 2 EMMEEGVPD 10


>sp|RL10E_HYPBU|LARGE ribosomal subunit protein uL16|Hyperthermus butylicus (strain DSM

Query: 1 DRLQEGV 7
DRLQEG+
Sbjct: 111 DRLQEGM 117


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DRLQEGVP 8
DRL G+P
Sbjct: 20 DRLHAGIP 27


>sp|Y2062_SULTO|MEMO1 family protein STK_20620|Sulfurisphaera tokodaii (strain DSM

Query: 5 EGVPDT 10
EG+PDT
Sbjct: 75 EGIPDT 80


>sp|RL10E_PYRAR|LARGE ribosomal subunit protein uL16|Pyrobaculum arsenaticum (strain DSM

Query: 1 DRLQEGV 7
DRLQEG+
Sbjct: 110 DRLQEGM 116


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 DRLQEGVP 8
DRL++G+P
Sbjct: 23 DRLEKGLP 30


>sp|THYX_SULTO|FLAVIN-DEPENDENT thymidylate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LQEGVPD 9
LQ+GVP+
Sbjct: 131 LQDGVPE 137


>sp|MPCT_HALS3|TRANSDUCER protein MpcT|Halobacterium salinarum (strain ATCC 29341

Query: 4 QEGVPDT 10
+EGVPD+
Sbjct: 596 EEGVPDS 602


>sp|TRM56_CENSY|TRNA (cytidine(56)-2'-O)-methyltransferase|Cenarchaeum symbiosum (strain

Query: 1 DRLQEG 6
DRLQEG
Sbjct: 141 DRLQEG 146


>sp|LYSJ_AERPE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 4 QEGVPD 9
+EGVPD
Sbjct: 289 EEGVPD 294


>sp|PYRF_PYRHO|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC

Query: 1 DRLQEGV 7
DRL+EG+
Sbjct: 151 DRLKEGI 157


>sp|PURO_METKA|IMP cyclohydrolase|Methanopyrus kandleri (strain AV19 /

Query: 1 DRLQEGVP 8
D+L+ GVP
Sbjct: 81 DKLESGVP 88


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 1 DRLQEGV 7
+RLQEG+
Sbjct: 309 ERLQEGI 315


>sp|Y992_IGNH4|MEMO1 family protein Igni_0992|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 QEGVPDT 10
QEG P+T
Sbjct: 74 QEGAPET 80


>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 1 DRLQEGVPD 9
D QEGVP+
Sbjct: 529 DLAQEGVPE 537


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 1 DRLQEGVPD 9
D QEGVP+
Sbjct: 529 DLAQEGVPE 537




180|Sequence|896|905|GVPDTIATLR

>sp|CSG2_HALHT|CELL surface glycoprotein 2|Haloarcula hispanica (strain ATCC 33960

Query: 3 PDTIATLR 10
PDT+ TLR
Sbjct: 449 PDTVGTLR 456


>sp|CSG1_HALHT|CELL surface glycoprotein 1|Haloarcula hispanica (strain ATCC 33960

Query: 3 PDTIATLR 10
PDT+ TLR
Sbjct: 446 PDTVGTLR 453


>sp|Y2062_SULTO|MEMO1 family protein STK_20620|Sulfurisphaera tokodaii (strain DSM

Query: 1 GVPDTIATL 9
G+PDT+ L
Sbjct: 76 GIPDTVIIL 84


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 GVPDTIAT 8
GVPD +AT
Sbjct: 410 GVPDRVAT 417


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 GVPDTIAT 8
GVPD +AT
Sbjct: 410 GVPDRVAT 417


>sp|HIS7_METKA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 1 GVPDTIATLR 10
GVP T TLR
Sbjct: 190 GVPSTKGTLR 199


>sp|Y3535_METJA|UNCHARACTERIZED protein MJECL35|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PDTIATLR 10
PD IATL+
Sbjct: 348 PDFIATLK 355


>sp|MAX1_METAC|SODIUM/CALCIUM exchanger MaX1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GVPDTI 6
G+PDT+
Sbjct: 237 GIPDTV 242


>sp|HEM1_PYRIL|GLUTAMYL-TRNA reductase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GVPDTIAT 8
GVP T+A+
Sbjct: 263 GVPQTVAS 270




181|Sequence|901|910|IATLREAGIQ

>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 1 IATLREAGIQ 10
+ TLREAGI+
Sbjct: 131 VKTLREAGIE 140


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 1 IATLREAGIQ 10
+ TLREAGI+
Sbjct: 131 VKTLREAGIE 140


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 1 IATLREAGIQ 10
+ +LREAGI+
Sbjct: 131 VKSLREAGIE 140


>sp|COFC_METMS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 1 IATLREAGIQ 10
+ATL+E GI+
Sbjct: 37 VATLKEGGIR 46


>sp|G1PDH_PYRIL|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum islandicum (strain DSM 4184

Query: 3 TLREAGIQ 10
TLREAGI
Sbjct: 294 TLREAGID 301


>sp|KDPC_METPE|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Methanosphaerula palustris (strain ATCC

Query: 1 IATLREAGI 9
IA+LR+AG+
Sbjct: 103 IASLRDAGV 111


>sp|COFC_METBF|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IATLREAGI 9
I TL+EAG+
Sbjct: 37 IDTLKEAGV 45


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 IATLREAGIQ 10
+ TLREAG +
Sbjct: 855 VKTLREAGFR 864


>sp|R15PI_ARCFU|RIBOSE 1,5-bisphosphate isomerase|Archaeoglobus fulgidus (strain ATCC

Query: 1 IATLREAGIQ 10
+ LREAGI+
Sbjct: 157 VKQLREAGIE 166


>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IATLREAGIQ 10
+ LRE GIQ
Sbjct: 193 VKALREIGIQ 202


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 1 IATLREAGIQ 10
+A +RE GIQ
Sbjct: 282 VAVIRELGIQ 291


>sp|PYRE_METAR|OROTATE phosphoribosyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IATLREAGI 9
I TLREAG+
Sbjct: 127 IHTLREAGL 135


>sp|RIBB_METLZ|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanocorpusculum labreanum (strain ATCC

Query: 1 IATLREAGI 9
+A LREAG+
Sbjct: 153 LAGLREAGL 161


>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IATLREAGIQ 10
+ LRE GIQ
Sbjct: 193 VKALREIGIQ 202


>sp|MCRC_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 4 LREAGIQ 10
+REAGIQ
Sbjct: 61 IREAGIQ 67


>sp|MCRC_METVA|METHYL-COENZYME M reductase operon protein|Methanococcus vannielii

Query: 4 LREAGIQ 10
+REAGIQ
Sbjct: 61 IREAGIQ 67


>sp|RL13E_AERPE|LARGE ribosomal subunit protein eL13|Aeropyrum pernix (strain ATCC

Query: 1 IATLREAGIQ 10
I LREAG++
Sbjct: 70 IERLREAGVE 79




182|Sequence|906|915|EAGIQLWVLT

>sp|Y133_THEAC|PUTATIVE quercetin 2,3-dioxygenase Ta0133|Thermoplasma acidophilum (strain

Query: 2 AGIQLWV 8
AGIQLW+
Sbjct: 84 AGIQLWL 90


>sp|RNZ_METKA|RIBONUCLEASE Z|Methanopyrus kandleri (strain AV19 /

Query: 1 EAGIQLWVLT 10
EAG+ L VLT
Sbjct: 235 EAGVDLLVLT 244


>sp|DHYS_METTH|PROBABLE deoxyhypusine synthase|Methanothermobacter thermautotrophicus

Query: 3 GIQLWVLT 10
G+QLW+ T
Sbjct: 192 GLQLWMYT 199


>sp|KADA_METIG|ADENYLATE kinase|Methanotorris igneus (Methanococcus igneus)

Query: 2 AGIQLWVL 9
AG+ +WVL
Sbjct: 103 AGLPIWVL 110


>sp|Y2093_ARCFU|UNCHARACTERIZED protein AF_2093|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AGIQLWVL 9
AG+++WV+
Sbjct: 194 AGLKIWVV 201


>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EAGIQLWVL 9
EAG+ WV+
Sbjct: 58 EAGVGPWVI 66


>sp|FTRL_METKA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanopyrus kandleri (strain AV19

Query: 1 EAGIQLWV 8
EAG++ W+
Sbjct: 53 EAGVERWL 60


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 IQLWVLT 10
+ LW+LT
Sbjct: 600 VNLWILT 606


>sp|RTCA_IGNH4|RNA 3'-terminal phosphate cyclase|Ignicoccus hospitalis (strain KIN4/I

Query: 2 AGIQLWVLT 10
+GI LW +T
Sbjct: 240 SGIVLWAIT 248


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EAGIQLWVLT 10
+ G+++W LT
Sbjct: 111 DRGVEIWDLT 120


>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 2 AGIQLWVLT 10
+G++LW +T
Sbjct: 302 SGVELWDVT 310




183|Sequence|911|920|LWVLTGDKQE

>sp|OTC_METMJ|ORNITHINE carbamoyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LWVLTGDKQE 10
+WV GD+QE
Sbjct: 222 IWVSMGDEQE 231


>sp|MTM1_METJA|TYPE II methyltransferase M.MjaI|Methanocaldococcus jannaschii (strain

Query: 1 LWVLTGDKQ 9
+W + GDKQ
Sbjct: 207 IWEIVGDKQ 215


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WVLTGDK 8
WVLTG+K
Sbjct: 510 WVLTGEK 516


>sp|OTC_METS3|ORNITHINE carbamoyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LWVLTGDKQE 10
+WV GD++E
Sbjct: 221 VWVSMGDEKE 230


>sp|MTXX_METAC|PUTATIVE methyltransferase mtx subunit X|Methanosarcina acetivorans

Query: 3 VLTGDKQE 10
VL GDK+E
Sbjct: 46 VLVGDKKE 53


>sp|LYSY_HALWD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 VLTGDKQ 9
+LTGD+Q
Sbjct: 164 ILTGDEQ 170


>sp|MTIP_METJA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanocaldococcus

Query: 3 VLTGDKQE 10
+L GDK+E
Sbjct: 13 ILKGDKEE 20


>sp|OTC_METST|ORNITHINE carbamoyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LWVLTGDKQE 10
+WV GD+ E
Sbjct: 221 VWVSMGDEDE 230


>sp|OTC_METMA|ORNITHINE carbamoyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LWVLTGDKQE 10
+WV GD+ E
Sbjct: 222 VWVSMGDEAE 231


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 WVLTG 6
WVLTG
Sbjct: 247 WVLTG 251


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 2 WVLTGDK 8
W++TG K
Sbjct: 853 WIMTGAK 859


>sp|HEM3_METAC|PROBABLE porphobilinogen deaminase|Methanosarcina acetivorans (strain ATCC

Query: 4 LTGDKQE 10
LT DKQE
Sbjct: 244 LTSDKQE 250


>sp|OTC_METAC|ORNITHINE carbamoyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LWVLTGDKQE 10
+WV GD+ E
Sbjct: 222 VWVSMGDEAE 231


>sp|OTC_METKA|ORNITHINE carbamoyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 LWVLTGDKQE 10
+WV GD+ E
Sbjct: 232 VWVSMGDEAE 241


>sp|OTC_METBF|ORNITHINE carbamoyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LWVLTGDKQE 10
+WV GD+ E
Sbjct: 222 VWVSMGDEAE 231


>sp|COBS_METJA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 WVLTGDKQE 10
W+ GDK++
Sbjct: 92 WMAVGDKRK 100


>sp|CAS1A_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LWVLTG 6
+W+LTG
Sbjct: 38 IWILTG 43


>sp|GFCR2_METAC|TRANSCRIPTIONAL regulator GfcR 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 WVLTGDKQE 10
W+LT K+E
Sbjct: 37 WLLTRSKKE 45




184|Sequence|916|925|GDKQETAVNI

>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 GDKQETAVNI 10
GDK++ VNI
Sbjct: 4 GDKRQPEVNI 13


>sp|CBIT_SACI7|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 DKQETAVNI 10
DK+E A+N+
Sbjct: 72 DKEEKAINL 80


>sp|CBIT_SACI6|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 DKQETAVNI 10
DK+E A+N+
Sbjct: 72 DKEEKAINL 80


>sp|CBIT_SACI4|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 DKQETAVNI 10
DK+E A+N+
Sbjct: 72 DKEEKAINL 80


>sp|CBIT_SACI3|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 DKQETAVNI 10
DK+E A+N+
Sbjct: 72 DKEEKAINL 80


>sp|CBIT_SACI2|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 DKQETAVNI 10
DK+E A+N+
Sbjct: 72 DKEEKAINL 80


>sp|CBIT_SACS2|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 DKQETAVNI 10
DK+E A+N+
Sbjct: 72 DKEEKAINL 80


>sp|CBIT_SACI1|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 DKQETAVNI 10
DK+E A+N+
Sbjct: 72 DKEEKAINL 80


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GDKQETAV 8
G+KQ TA+
Sbjct: 154 GEKQRTAI 161


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 GDKQETAV 8
G+KQ TA+
Sbjct: 154 GEKQRTAI 161




185|Sequence|921|930|TAVNIAHSCR

>sp|RL22_THEVO|LARGE ribosomal subunit protein uL22|Thermoplasma volcanium (strain

Query: 2 AVNIAHSCR 10
AVNIAH R
Sbjct: 27 AVNIAHHIR 35


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 2 AVNIAHSCR 10
VN+AHS R
Sbjct: 241 GVNLAHSMR 249


>sp|PRIL_METBU|DNA primase large subunit PriL|Methanococcoides burtonii (strain DSM

Query: 2 AVNIAHSCR 10
VN+AHS R
Sbjct: 248 GVNLAHSMR 256


>sp|PRIL_METBF|DNA primase large subunit PriL|Methanosarcina barkeri (strain Fusaro /

Query: 2 AVNIAHSCR 10
VN+AHS R
Sbjct: 241 GVNLAHSMR 249


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain ATCC

Query: 2 AVNIAHSCR 10
VN+AHS R
Sbjct: 241 GVNLAHSMR 249


>sp|RL22_THEAC|LARGE ribosomal subunit protein uL22|Thermoplasma acidophilum (strain

Query: 2 AVNIAHSCR 10
+VNIAH R
Sbjct: 30 SVNIAHHLR 38


>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 NIAHSC 9
NIAH C
Sbjct: 279 NIAHGC 284


>sp|ARGDC_SACI7|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain

Query: 2 AVNIAH 7
AVNIAH
Sbjct: 50 AVNIAH 55


>sp|ARGDC_SACI6|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 2 AVNIAH 7
AVNIAH
Sbjct: 50 AVNIAH 55


>sp|ARGDC_SACI4|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain M.14.25

Query: 2 AVNIAH 7
AVNIAH
Sbjct: 50 AVNIAH 55


>sp|ARGDC_SACI3|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain M.16.27)

Query: 2 AVNIAH 7
AVNIAH
Sbjct: 50 AVNIAH 55


>sp|ARGDC_SACI2|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain L.S.2.15

Query: 2 AVNIAH 7
AVNIAH
Sbjct: 50 AVNIAH 55


>sp|ARGDC_SACI1|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain

Query: 2 AVNIAH 7
AVNIAH
Sbjct: 50 AVNIAH 55


>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 3 VNIAHSCR 10
+ +AHSC+
Sbjct: 360 LTVAHSCQ 367




186|Sequence|926|935|AHSCRLLNQT

>sp|AROA_METVS|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 AHSCRLL 7
AH+CR+L
Sbjct: 52 AHACRML 58


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 1 AHSCRLLN 8
A++CR+LN
Sbjct: 152 AYTCRVLN 159




187|Sequence|931|940|LLNQTDTVYT

>sp|Y1641_METJA|UNCHARACTERIZED protein MJ1641|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLNQTDTVYT 10
LLN D VYT
Sbjct: 95 LLNNLDLVYT 104


>sp|DNAG_PYRCJ|DNA primase DnaG|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LLNQTDTVY 9
L N TD++Y
Sbjct: 348 LANSTDSIY 356


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 2 LNQTDTVYT 10
++ DTVYT
Sbjct: 58 MDMADTVYT 66




188|Sequence|936|945|DTVYTINTEN

>sp|UPPS_METKA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanopyrus

Query: 2 TVYTINTEN 10
TVY ++TEN
Sbjct: 90 TVYALSTEN 98


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DTVYTINTE 9
+TVY++NT+
Sbjct: 211 ETVYSVNTQ 219


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DTVYTINT 8
DTVY++NT
Sbjct: 202 DTVYSVNT 209


>sp|RNP1_NITMS|RIBONUCLEASE P protein component 1|Nitrosopumilus maritimus (strain SCM1)

Query: 2 TVYTINTEN 10
+++TINTEN
Sbjct: 40 SMFTINTEN 48


>sp|UPPS_PYRHO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrococcus

Query: 2 TVYTINTEN 10
TVY +TEN
Sbjct: 83 TVYAFSTEN 91


>sp|UPPS_PYRFU|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrococcus

Query: 2 TVYTINTEN 10
TVY +TEN
Sbjct: 83 TVYAFSTEN 91


>sp|UPPS_PYRAB|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrococcus abyssi

Query: 2 TVYTINTEN 10
TVY +TEN
Sbjct: 83 TVYAFSTEN 91


>sp|UPPS_THEKO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermococcus

Query: 2 TVYTINTEN 10
TVY +TEN
Sbjct: 83 TVYAFSTEN 91


>sp|UPPS_HALMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Haloarcula

Query: 2 TVYTINTEN 10
T+YT +TEN
Sbjct: 73 TLYTFSTEN 81


>sp|BTUCA_HALSA|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 2 TVYTINTEN 10
TVY I T+N
Sbjct: 171 TVYAIATKN 179


>sp|BTUCA_HALS3|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 2 TVYTINTEN 10
TVY I T+N
Sbjct: 171 TVYAIATKN 179


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 1 DTVYTINTE 9
+TVY+ NT+
Sbjct: 208 ETVYSANTQ 216


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 1 DTVYTINTE 9
+TVY+ NT+
Sbjct: 211 ETVYSANTQ 219


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DTVYTINTE 9
+TVY+ NT+
Sbjct: 213 ETVYSANTQ 221


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DTVYTINT 8
+TVY++NT
Sbjct: 200 NTVYSVNT 207


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DTVYTINTE 9
+TVY+ NT+
Sbjct: 208 ETVYSANTQ 216


>sp|UPPS_HALSA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Halobacterium

Query: 2 TVYTINTEN 10
T+Y +TEN
Sbjct: 73 TLYAFSTEN 81


>sp|UPPS_ARCFU|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Archaeoglobus

Query: 2 TVYTINTEN 10
T+Y +TEN
Sbjct: 69 TLYAFSTEN 77


>sp|UPPS_METMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina

Query: 2 TVYTINTEN 10
T+Y +TEN
Sbjct: 75 TLYAFSTEN 83


>sp|UPPS_PICTO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Picrophilus

Query: 2 TVYTINTEN 10
TVY +TEN
Sbjct: 74 TVYAFSTEN 82




189|Sequence|941|950|INTENQETCE

>sp|TRPF_METKA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanopyrus kandleri (strain AV19 /

Query: 3 TENQETCE 10
TE+ ETCE
Sbjct: 83 TEDPETCE 90


>sp|PYRK_METKA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanopyrus kandleri

Query: 4 ENQETCE 10
EN+E CE
Sbjct: 13 ENREECE 19


>sp|SYDND_METBU|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 INTENQETCE 10
+N E++ET E
Sbjct: 296 VNAESEETVE 305




190|Sequence|946|955|QETCESILNC

>sp|RFCS_METLZ|REPLICATION factor C small subunit|Methanocorpusculum labreanum (strain ATCC

Query: 2 ETCESILNC 10
ETC IL+C
Sbjct: 132 ETCRFILSC 140


>sp|DPCKG_CALMQ|GTP-DEPENDENT dephospho-CoA kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 QETCESILNC 10
++ CE++ NC
Sbjct: 180 RDECETLRNC 189


>sp|PUR2_METJA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ETCESILN 9
E CE+I+N
Sbjct: 317 EVCEAIVN 324


>sp|RFCS_METHJ|REPLICATION factor C small subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ETCESILNC 10
+TC IL+C
Sbjct: 132 QTCRFILSC 140


>sp|SURE_METMJ|5'-NUCLEOTIDASE SurE|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 QETCESIL 8
+ETCE +L
Sbjct: 156 RETCERVL 163


>sp|LEU3_METJA|3-ISOPROPYLMALATE/3-METHYLMALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QETCESILNC 10
+ET E+ L+C
Sbjct: 52 EETIETALDC 61


>sp|RFCS_METB6|REPLICATION factor C small subunit|Methanoregula boonei (strain DSM 21154

Query: 2 ETCESILNC 10
+TC IL+C
Sbjct: 132 KTCRFILSC 140


>sp|Y1986_ARCFU|UNCHARACTERIZED protein AF_1986|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ETCESILN 9
E CE ILN
Sbjct: 131 EECEVILN 138


>sp|RFCS_METMJ|REPLICATION factor C small subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 TCESILNC 10
TC IL+C
Sbjct: 133 TCRFILSC 140




191|Sequence|951|960|SILNCALEEL

>sp|CARA_METVS|CARBAMOYL phosphate synthase small chain|Methanococcus vannielii (strain ATCC

Query: 1 SILNCALE 8
SILNC LE
Sbjct: 183 SILNCLLE 190


>sp|ALF1_THETK|FRUCTOSE-BISPHOSPHATE aldolase class 1|Thermoproteus tenax (strain ATCC 35583

Query: 1 SILNCALEE 9
S+ NC++EE
Sbjct: 92 SVANCSVEE 100


>sp|FEN_IGNH4|FLAP endonuclease 1|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 LNCALEEL 10
L C LEEL
Sbjct: 216 LKCVLEEL 223


>sp|DHQS_METB6|3-DEHYDROQUINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 ILNCALE 8
IL CALE
Sbjct: 307 ILGCALE 313


>sp|THS_METMP|CHAPERONIN subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 SILNCALE 8
++LNCA+E
Sbjct: 233 ALLNCAIE 240


>sp|IDI2_METMA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ILNCALEEL 10
+L+C LEE
Sbjct: 310 VLSCMLEEF 318


>sp|THS_METJA|THERMOSOME subunit|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ILNCALEE 9
++ CALEE
Sbjct: 394 VVKCALEE 401




192|Sequence|956|965|ALEELKQFRE

>sp|SRP54_METTH|SIGNAL recognition particle 54 kDa|Methanothermobacter thermautotrophicus

Query: 1 ALEELKQFRE 10
ALE+LKQ+ E
Sbjct: 142 ALEQLKQYTE 151


>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ALEELKQFRE 10
A E LKQF E
Sbjct: 396 AFETLKQFNE 405


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LEELKQF 8
LEELK+F
Sbjct: 240 LEELKKF 246


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 3 EELKQFRE 10
EE+K FRE
Sbjct: 282 EEIKLFRE 289


>sp|SRP54_METJA|SIGNAL recognition particle 54 kDa|Methanocaldococcus jannaschii (strain

Query: 2 LEELKQFRE 10
LEE+KQ +E
Sbjct: 200 LEEMKQIKE 208


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LEELKQFRE 10
LEE+KQ+++
Sbjct: 49 LEEIKQYKD 57


>sp|SYFB_SACI7|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LEELKQFRE 10
LEEL QF+E
Sbjct: 107 LEELIQFQE 115


>sp|SYFB_SACI1|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LEELKQFRE 10
LEEL QF+E
Sbjct: 107 LEELIQFQE 115


>sp|SYFB_SACI2|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LEELKQFRE 10
LEEL QF+E
Sbjct: 107 LEELIQFQE 115


>sp|SYFB_SACI3|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.16.27)

Query: 2 LEELKQFRE 10
LEEL QF+E
Sbjct: 107 LEELIQFQE 115


>sp|SYFB_SACI6|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LEELKQFRE 10
LEEL QF+E
Sbjct: 107 LEELIQFQE 115


>sp|SYFB_SACI4|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LEELKQFRE 10
LEEL QF+E
Sbjct: 107 LEELIQFQE 115


>sp|SMC_PYRFU|CHROMOSOME partition protein Smc|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ALEELKQFRE 10
ALEELKQ E
Sbjct: 179 ALEELKQAEE 188


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LEELKQFRE 10
LE+L++FRE
Sbjct: 604 LEDLQRFRE 612


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 1 ALEELKQFRE 10
AL ELK+FR+
Sbjct: 121 ALLELKRFRD 130


>sp|RL18E_SULTO|LARGE ribosomal subunit protein eL18|Sulfurisphaera tokodaii (strain DSM

Query: 1 ALEELKQFR 9
ALEE+K F+
Sbjct: 103 ALEEVKDFK 111


>sp|Y924_METJA|UNCHARACTERIZED ATP-binding protein MJ0924|Methanocaldococcus jannaschii (strain

Query: 1 ALEELKQFRE 10
ALE+LK+ +E
Sbjct: 238 ALEKLKEVKE 247


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 3 EELKQFRE 10
EELK+F+E
Sbjct: 634 EELKKFKE 641


>sp|SYFB_AERPE|PHENYLALANINE--TRNA ligase beta subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 LEELKQFRE 10
LEEL QF+E
Sbjct: 110 LEELIQFQE 118


>sp|SODF_PYRAE|SUPEROXIDE dismutase [Fe]|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ALEELKQFRE 10
ALE+L++FR+
Sbjct: 46 ALEKLEKFRK 55


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 2 LEELKQFR 9
L+ELK+F+
Sbjct: 669 LDELKEFK 676


>sp|MFNA_ARCFU|PROBABLE L-aspartate decarboxylase|Archaeoglobus fulgidus (strain ATCC

Query: 2 LEELKQFRE 10
+EEL+ +RE
Sbjct: 4 IEELRAYRE 12




193|Sequence|961|970|KQFRELQKPD

>sp|Y1089_METJA|UNCHARACTERIZED protein MJ1089|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FRELQKPD 10
FREL+ PD
Sbjct: 145 FRELKMPD 152


>sp|PGP_METBU|PHOSPHOGLYCOLATE phosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KQFRELQKP 9
K+FREL P
Sbjct: 27 KRFRELNVP 35


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FRELQKPD 10
+RE+Q PD
Sbjct: 201 YREIQVPD 208


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 KQFRELQKPD 10
K FR+ KPD
Sbjct: 207 KAFRDAGKPD 216


>sp|RF1_THEVO|PEPTIDE chain release factor subunit|Thermoplasma volcanium (strain ATCC

Query: 3 FRELQKPD 10
RE++KPD
Sbjct: 288 LREVKKPD 295


>sp|RF1_THEAC|PEPTIDE chain release factor subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 FRELQKPD 10
RE++KPD
Sbjct: 288 LREVRKPD 295




194|Sequence|966|975|LQKPDRKLFG

>sp|TRUB_PICTO|PROBABLE tRNA pseudouridine synthase B|Picrophilus torridus (strain ATCC

Query: 1 LQKPDRKLFG 10
+QKP+RKL G
Sbjct: 302 VQKPERKLHG 311


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQKPDRKLF 9
+QKPD +LF
Sbjct: 450 IQKPDGRLF 458


>sp|SECE_SACS2|PROTEIN translocase subunit SecE|Saccharolobus solfataricus (strain ATCC

Query: 2 QKPDRKLF 9
+KPDR F
Sbjct: 25 RKPDRNFF 32


>sp|COXX_THEVO|PROTOHEME IX farnesyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LQKPDRK 7
++KPDRK
Sbjct: 256 VRKPDRK 262


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 1 LQKPDRKLFG 10
L+KP + LFG
Sbjct: 564 LEKPYKALFG 573


>sp|RRP41_PYRHO|EXOSOME complex component Rrp41|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LQKPDRKLF 9
LQ+PDR +
Sbjct: 67 LQRPDRAIL 75


>sp|RRP41_PYRAB|EXOSOME complex component Rrp41|Pyrococcus abyssi (strain GE5 /

Query: 1 LQKPDRKLF 9
LQ+PDR +
Sbjct: 67 LQRPDRAIL 75


>sp|RRP41_THEON|EXOSOME complex component Rrp41|Thermococcus onnurineus (strain NA1)

Query: 1 LQKPDRKLF 9
LQ+PDR +
Sbjct: 67 LQRPDRAIL 75


>sp|RRP41_PYRFU|EXOSOME complex component Rrp41|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LQKPDRKLF 9
LQ+PDR +
Sbjct: 67 LQRPDRAIL 75


>sp|RRP41_THEKO|EXOSOME complex component Rrp41|Thermococcus kodakarensis (strain ATCC

Query: 1 LQKPDRKLF 9
LQ+PDR +
Sbjct: 67 LQRPDRAIL 75




195|Sequence|971|980|RKLFGFRLPS

>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 FGFRLPS 10
+GFRLPS
Sbjct: 362 YGFRLPS 368


>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 4 FGFRLPS 10
+GFRLPS
Sbjct: 365 YGFRLPS 371


>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 4 FGFRLPS 10
+GFRLPS
Sbjct: 362 YGFRLPS 368


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 FGFRLPS 10
+GFRLPS
Sbjct: 384 YGFRLPS 390


>sp|UVRB_METAC|UVRABC system protein B|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 FGFRLPS 10
+GFRLPS
Sbjct: 384 YGFRLPS 390


>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 4 FGFRLPS 10
+GFRLPS
Sbjct: 362 YGFRLPS 368


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 RKLFGFRL 8
RKLFGF+
Sbjct: 318 RKLFGFKF 325


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 GFRLPS 10
GFRLPS
Sbjct: 363 GFRLPS 368


>sp|NIFH2_METTH|NITROGENASE iron protein 2|Methanothermobacter thermautotrophicus (strain

Query: 1 RKLFGFRLPS 10
R L+G RLP+
Sbjct: 44 RTLYGERLPT 53


>sp|KCY_IGNH4|CYTIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RKLFGFRLPS 10
RKL+GF + S
Sbjct: 136 RKLYGFDVAS 145


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 KLFGFRL 8
KL+GFR+
Sbjct: 676 KLYGFRI 682


>sp|Y1010_METJA|UNCHARACTERIZED ATP-binding protein MJ1010|Methanocaldococcus jannaschii (strain

Query: 2 KLFGFRL 8
K FGFRL
Sbjct: 81 KTFGFRL 87


>sp|RL23_METBF|LARGE ribosomal subunit protein uL23|Methanosarcina barkeri (strain

Query: 2 KLFGFRLPS 10
KL+GF++ S
Sbjct: 41 KLYGFKVKS 49


>sp|LYSY_AERPE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 KLFGFRLP 9
KL+GF+ P
Sbjct: 115 KLYGFKHP 122




196|Sequence|976|985|FRLPSKTPSI

>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 RLPSKTP 8
RLPSK P
Sbjct: 46 RLPSKAP 52


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RLPSKTP 8
RLPSK P
Sbjct: 46 RLPSKAP 52


>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RLPSKTPSI 10
R PS+TP++
Sbjct: 243 RFPSQTPTV 251


>sp|RL3_PICTO|LARGE ribosomal subunit protein uL3|Picrophilus torridus (strain ATCC

Query: 3 LPSKTPSI 10
+PSKTP I
Sbjct: 146 VPSKTPEI 153


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RLPSKTPS 9
R PS+TP+
Sbjct: 243 RFPSQTPT 250


>sp|PYLC_METMA|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RLPSKTPS 9
R PS+TP+
Sbjct: 251 RFPSQTPT 258


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 LPSKTPS 9
LPSK PS
Sbjct: 198 LPSKRPS 204




197|Sequence|981|990|KTPSITSEAV

>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 2 TPSITSEA 9
TP ITSEA
Sbjct: 525 TPKITSEA 532


>sp|PCNA_THEAC|DNA polymerase sliding clamp|Thermoplasma acidophilum (strain ATCC

Query: 1 KTPSITSE 8
K P+ITSE
Sbjct: 119 KIPNITSE 126




198|Sequence|986|995|TSEAVVPEAG

>sp|GLYA_PYRAE|SERINE hydroxymethyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TSEAVVPEAG 10
T A+VPE G
Sbjct: 100 TYHALVPEGG 109


>sp|PHR_HALSA|DEOXYRIBODIPYRIMIDINE photo-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 3 EAVVPEAG 10
EA VP+AG
Sbjct: 201 EAAVPDAG 208


>sp|GATE_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Natronomonas pharaonis (strain ATCC

Query: 1 TSEAVVPEAG 10
T+EA V EAG
Sbjct: 544 TAEAAVEEAG 553




199|Sequence|991|1000|VPEAGLVIDG

>sp|Y2160_ARCFU|UNCHARACTERIZED protein AF_2160|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VPEAGLVIDG 10
V + GLVIDG
Sbjct: 101 VADKGLVIDG 110


>sp|AMPD_METJA|ANHYDROMEVALONATE phosphate decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VPEAGLVIDG 10
VPEA +I+G
Sbjct: 217 VPEAEFIIEG 226


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VPEAGLVID 9
VPEAG++ D
Sbjct: 362 VPEAGILYD 370


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 2 PEAGLVIDG 10
PE GLV+ G
Sbjct: 70 PEKGLVVAG 78


>sp|Y1383_THEVO|MEMO1 family protein TV1383|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VPEAGLVIDG 10
VP AG+V G
Sbjct: 42 VPHAGIVYSG 51


>sp|K6PF_THELI|ADP-SPECIFIC phosphofructokinase|Thermococcus litoralis

Query: 1 VPEAGLVIDG 10
+PE G ++DG
Sbjct: 215 LPEIGEMVDG 224


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPEAGLVI 8
VPE GL++
Sbjct: 748 VPEEGLIL 755


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 2 PEAGLVID 9
P +GL++D
Sbjct: 235 PRSGLIVD 242


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VPEAGLVID 9
VPEAG++ D
Sbjct: 362 VPEAGVLYD 370


>sp|PMDHS_PYRAB|PHOSPHOMEVALONATE dehydratase small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 PEAGLVID 9
PE G++ID
Sbjct: 32 PETGIIID 39


>sp|THI4_SACI1|THIAMINE thiazole synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VPEAGLVIDG 10
+PE G+VI G
Sbjct: 189 IPELGIVIAG 198


>sp|K6PF_PYRFU|ADP-SPECIFIC phosphofructokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VPEAGLVIDG 10
+PE G ++DG
Sbjct: 210 LPEIGEMVDG 219


>sp|THI4_METS5|THIAMINE thiazole synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VPEAGLVIDG 10
+PE G+VI G
Sbjct: 187 IPELGIVIPG 196


>sp|THI4_SACI4|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VPEAGLVIDG 10
+PE G+VI G
Sbjct: 189 IPELGIVIPG 198


>sp|THI4_SACI7|THIAMINE thiazole synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VPEAGLVIDG 10
+PE G+VI G
Sbjct: 189 IPELGIVIPG 198


>sp|THI4_SACI6|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VPEAGLVIDG 10
+PE G+VI G
Sbjct: 189 IPELGIVIPG 198


>sp|THI4_SACI3|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.16.27)

Query: 1 VPEAGLVIDG 10
+PE G+VI G
Sbjct: 189 IPELGIVIPG 198


>sp|THI4_SACI2|THIAMINE thiazole synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VPEAGLVIDG 10
+PE G+VI G
Sbjct: 189 IPELGIVIPG 198


>sp|THI4_SULAC|THIAMINE thiazole synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VPEAGLVIDG 10
+PE G+VI G
Sbjct: 191 IPELGIVIPG 200


>sp|THI4_SACS2|THIAMINE thiazole synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VPEAGLVIDG 10
+PE G+VI G
Sbjct: 189 IPELGIVIPG 198


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PEAGLVIDG 10
P AGL++ G
Sbjct: 307 PHAGLIVTG 315


>sp|AROC_CALMQ|CHORISMATE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 PEAGLVIDG 10
P G+VIDG
Sbjct: 19 PAVGVVIDG 27


>sp|AROC_SACS2|CHORISMATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PEAGLVIDG 10
P G+VIDG
Sbjct: 21 PAVGVVIDG 29


>sp|AROC_SACI7|CHORISMATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PEAGLVIDG 10
P G+VIDG
Sbjct: 21 PAVGVVIDG 29


>sp|AROC_SACI6|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PEAGLVIDG 10
P G+VIDG
Sbjct: 21 PAVGVVIDG 29


>sp|AROC_SACI4|CHORISMATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PEAGLVIDG 10
P G+VIDG
Sbjct: 21 PAVGVVIDG 29


>sp|AROC_SACI3|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 PEAGLVIDG 10
P G+VIDG
Sbjct: 21 PAVGVVIDG 29


>sp|AROC_SACI2|CHORISMATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PEAGLVIDG 10
P G+VIDG
Sbjct: 21 PAVGVVIDG 29


>sp|AROC_SACI1|CHORISMATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PEAGLVIDG 10
P G+VIDG
Sbjct: 21 PAVGVVIDG 29


>sp|APGM_PYRAE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VPEAGLVID 9
V EAG+VID
Sbjct: 99 VDEAGVVID 107


>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 EAGLVIDG 10
EAGLV+ G
Sbjct: 472 EAGLVVSG 479


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 1 VPEAGLVIDG 10
V E+GL I+G
Sbjct: 163 VTESGLTIEG 172


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 EAGLVIDG 10
EAGLV+ G
Sbjct: 472 EAGLVVSG 479


>sp|PMDHS_METTP|PHOSPHOMEVALONATE dehydratase small subunit|Methanothrix thermoacetophila (strain

Query: 2 PEAGLVID 9
PE G+V+D
Sbjct: 32 PETGVVVD 39


>sp|Y237_THEAC|MEMO1 family protein Ta0237|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VPEAGLVIDG 10
VP AG++ G
Sbjct: 42 VPHAGIIYSG 51


>sp|LEUC1_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 1 VPEAGLVIDG 10
+PE GLV+ G
Sbjct: 107 LPELGLVLPG 116


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VPEAGLVIDG 10
+PE GLV+ G
Sbjct: 108 LPELGLVLPG 117




200|Sequence|996|1005|LVIDGKTLNA

>sp|DPCKG_AERPE|GTP-DEPENDENT dephospho-CoA kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LVIDGKT 7
LV+DGKT
Sbjct: 70 LVVDGKT 76


>sp|PDXT_METVS|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus vannielii (strain

Query: 1 LVIDGKTLNA 10
+++DGK LNA
Sbjct: 116 IILDGKKLNA 125


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 4 DGKTLN 9
DGKTLN
Sbjct: 237 DGKTLN 242


>sp|SPEE_AERPE|POLYAMINE aminopropyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LVIDGKT 7
LV+DGKT
Sbjct: 56 LVLDGKT 62


>sp|SFSA_SULAC|SUGAR fermentation stimulation protein homolog|Sulfolobus acidocaldarius

Query: 1 LVIDGKTL 8
LV+DGK L
Sbjct: 125 LVVDGKAL 132


>sp|NADK_METHJ|NAD kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LVIDGKT 7
LVIDG+T
Sbjct: 224 LVIDGQT 230


>sp|ENGB_HALMA|PROBABLE GTP-binding protein EngB|Haloarcula marismortui (strain ATCC 43049

Query: 1 LVIDGKTL 8
LV+DGK++
Sbjct: 98 LVVDGKSV 105


>sp|Y967_METTH|PUTATIVE HTH-type transcriptional regulatory protein|Methanothermobacter

Query: 3 IDGKTL 8
IDGKTL
Sbjct: 129 IDGKTL 134


>sp|SPSS_META3|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LVIDGKTLNA 10
L ++GK LNA
Sbjct: 203 LPVNGKKLNA 212


>sp|DHEB_HALSI|GLUTAMATE dehydrogenase B|Halobacterium salinarum (Halobacterium halobium)

Query: 1 LVIDGKTLNA 10
+V+D KTL+A
Sbjct: 122 VVVDPKTLSA 131


>sp|DHEB_HALSA|GLUTAMATE dehydrogenase B|Halobacterium salinarum (strain ATCC 700922

Query: 1 LVIDGKTLNA 10
+V+D KTL+A
Sbjct: 122 VVVDPKTLSA 131


>sp|Y076_METFV|UNCHARACTERIZED protein Mfer_0076|Methanothermus fervidus (strain ATCC 43054

Query: 1 LVIDGKTL 8
+ IDGKT+
Sbjct: 120 ITIDGKTI 127


>sp|CHEB_ARCFU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Archaeoglobus fulgidus

Query: 2 VIDGKTLNA 10
V+DG+ +NA
Sbjct: 248 VVDGEPVNA 256


>sp|DPCKG_CENSY|GTP-DEPENDENT dephospho-CoA kinase|Cenarchaeum symbiosum (strain A)

Query: 2 VIDGKTLNA 10
+IDGKT A
Sbjct: 47 IIDGKTRRA 55


>sp|FOLD_METTP|BIFUNCTIONAL protein FolD|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LVIDGKTL 8
++IDGK L
Sbjct: 1 MIIDGKAL 8




201|Sequence|1001|1010|KTLNAIFQGK

>sp|G3P_SACS2|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 NAIFQG 9
NAIFQG
Sbjct: 103 NAIFQG 108


>sp|G3P_SACI7|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 NAIFQG 9
NAIFQG
Sbjct: 103 NAIFQG 108


>sp|G3P_SACI6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 NAIFQG 9
NAIFQG
Sbjct: 103 NAIFQG 108


>sp|G3P_SACI4|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 NAIFQG 9
NAIFQG
Sbjct: 103 NAIFQG 108


>sp|G3P_SACI3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 NAIFQG 9
NAIFQG
Sbjct: 103 NAIFQG 108


>sp|G3P_SACI2|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 NAIFQG 9
NAIFQG
Sbjct: 103 NAIFQG 108


>sp|G3P_SACI1|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 NAIFQG 9
NAIFQG
Sbjct: 103 NAIFQG 108


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KTLNAIFQGK 10
+ LNAI GK
Sbjct: 408 EALNAILDGK 417


>sp|COFF_METJA|COENZYME gamma-F420-2:alpha-L-glutamate ligase|Methanocaldococcus jannaschii

Query: 2 TLNAIFQGK 10
T NAI++GK
Sbjct: 162 TKNAIWEGK 170




202|Sequence|1006|1015|IFQGKLEKKF

>sp|SECF_METP4|PROTEIN-EXPORT membrane protein SecF|Methanolacinia petrolearia (strain DSM 11571

Query: 3 QGKLEKKF 10
QGK+++KF
Sbjct: 207 QGKVDEKF 214


>sp|PPSA_ARCFU|PROBABLE phosphoenolpyruvate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 1 IFQGKLEKK 9
+++G++EKK
Sbjct: 436 VYEGRIEKK 444


>sp|SAHH_SACS2|ADENOSYLHOMOCYSTEINASE solfataricus (strain ATCC 35092

Query: 3 QGKLEKK 9
+GKLEKK
Sbjct: 369 RGKLEKK 375




203|Sequence|1011|1020|LEKKFLELTQ

>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 LEKKFLELTQ 10
L K+F+ELT+
Sbjct: 210 LRKRFMELTR 219


>sp|KHSE_PYRAE|HOMOSERINE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 KKFLELT 9
KKF ELT
Sbjct: 58 KKFFELT 64


>sp|MRE11_ARCFU|DNA double-strand break repair protein|Archaeoglobus fulgidus (strain

Query: 1 LEKKFLEL 8
LEKKFLE+
Sbjct: 280 LEKKFLEV 287


>sp|PDXT_THEKO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Thermococcus kodakarensis

Query: 2 EKKFLEL 8
E+KFLEL
Sbjct: 101 EQKFLEL 107


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LEKKFLELTQ 10
L ++F+ELT+
Sbjct: 211 LRQRFMELTE 220




204|Sequence|1016|1025|LELTQYCRSV

>sp|Y1584_METJA|UNCHARACTERIZED protein MJ1584|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 TQYCRSV 10
++YCRSV
Sbjct: 64 SEYCRSV 70


>sp|DNLI_NITMS|DNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LELTQY 6
LELTQY
Sbjct: 20 LELTQY 25


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 LTQYCRSV 10
+TQYC+ +
Sbjct: 520 ITQYCQDL 527


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 2 ELTQYCRSV 10
++T YC S+
Sbjct: 248 DMTNYCESL 256




205|Sequence|1021|1030|YCRSVLCCRS

>sp|HIS8_NATPD|HISTIDINOL-PHOSPHATE aminotransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YCRSVLCCRS 10
Y RS L CR+
Sbjct: 284 YIRSTLECRT 293


>sp|Y2656_METAC|UPF0228 protein MA_2656|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 SVLCC 8
SVLCC
Sbjct: 303 SVLCC 307




206|Sequence|1026|1035|LCCRSTPLQK

***** No hits found ******


207|Sequence|1031|1040|TPLQKSMIVK

***** No hits found ******


208|Sequence|1036|1045|SMIVKLVRDK

>sp|METK_PYRIL|S-ADENOSYLMETHIONINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SMIVKLVRDK 10
+MI KLV+DK
Sbjct: 217 AMISKLVKDK 226


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 SMIVKLVRD 9
SM+ KL+RD
Sbjct: 195 SMVRKLIRD 203


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 IVKLVRDK 10
+VK+VRD+
Sbjct: 444 VVKMVRDQ 451


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 3 IVKLVRDK 10
++KL RDK
Sbjct: 140 LIKLARDK 147


>sp|Y1517_METJA|UNCHARACTERIZED protein MJ1517|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SMIVKLVR 8
SM+VKLV+
Sbjct: 251 SMVVKLVK 258




209|Sequence|1041|1050|LVRDKLRVMT

>sp|MTBC_METTE|DIMETHYLAMINE corrinoid protein|Methanosarcina thermophila

Query: 2 VRDKLRVM 9
+RDK++VM
Sbjct: 17 LRDKIKVM 24


>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain

Query: 2 VRDKLRVM 9
V+DKLR M
Sbjct: 80 VQDKLRAM 87


>sp|Y241_ARCFU|S-ADENOSYL-L-METHIONINE-BINDING protein AF_0241|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RDKLRVM 9
RDKLRV+
Sbjct: 62 RDKLRVV 68




210|Sequence|1046|1055|LRVMTLSIGD

>sp|SYS_NITMS|SERINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 RVMTLSIGD 10
RVM LS GD
Sbjct: 316 RVMLLSTGD 324


>sp|THIC1_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 MTLSIGD 10
MTLS+GD
Sbjct: 215 MTLSLGD 221


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 4 MTLSIGD 10
MTLS+GD
Sbjct: 215 MTLSLGD 221


>sp|THIC1_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 MTLSIGD 10
MTLS+GD
Sbjct: 215 MTLSLGD 221


>sp|RS3A_METLZ|SMALL ribosomal subunit protein eS1|Methanocorpusculum labreanum

Query: 2 RVMTLSIGD 10
RV+T+S+G+
Sbjct: 48 RVLTVSLGE 56


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 LRVMTLSIG 9
LRV+ LS+G
Sbjct: 324 LRVLELSLG 332


>sp|PELO_THEPD|PROTEIN pelota homolog|Thermofilum pendens (strain DSM 2475

Query: 2 RVMTLSIGD 10
RV+ +S+GD
Sbjct: 133 RVLLISVGD 141


>sp|DHQS_METLZ|3-DEHYDROQUINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 RVMTLSIGD 10
++ TLS+GD
Sbjct: 176 KISTLSLGD 184




211|Sequence|1051|1060|LSIGDGANDV

>sp|SERB_METJA|PHOSPHOSERINE phosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSIGDGANDV 10
+++GDGAND+
Sbjct: 163 VAVGDGANDI 172


>sp|PATS_METJA|SOLUBLE P-type ATPase-like phosphatase|Methanocaldococcus jannaschii

Query: 1 LSIGDGANDV 10
+ +GDGANDV
Sbjct: 206 IMVGDGANDV 215


>sp|PGP_AERPE|PHOSPHOGLYCOLATE phosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LSIGDGANDV 10
L+IGDG NDV
Sbjct: 179 LAIGDGENDV 188


>sp|SERB_ARCFU|PHOSPHOSERINE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSIGDGAND 9
+++GDGAND
Sbjct: 287 VAVGDGAND 295


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSIGDGANDV 10
LS+G G NDV
Sbjct: 375 LSLGVGENDV 384


>sp|MPGP_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SIGDGAND 9
++GDG ND
Sbjct: 201 AVGDGEND 208


>sp|PGP_THEKO|PHOSPHOGLYCOLATE phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IGDGANDV 10
IGDG ND+
Sbjct: 178 IGDGENDL 185


>sp|PGP_HALSA|PHOSPHOGLYCOLATE phosphatase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LSIGDGANDV 10
+++GD ANDV
Sbjct: 172 VAVGDSANDV 181


>sp|PGP_HALS3|PHOSPHOGLYCOLATE phosphatase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LSIGDGANDV 10
+++GD ANDV
Sbjct: 172 VAVGDSANDV 181


>sp|MPGP_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 2 SIGDGAND 9
++GDG ND
Sbjct: 201 AVGDGYND 208


>sp|PGP_PYRAB|PHOSPHOGLYCOLATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 3 IGDGANDV 10
IGDG ND+
Sbjct: 175 IGDGENDL 182


>sp|OTC_AERPE|ORNITHINE carbamoyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 IGDGANDV 10
+GDGA++V
Sbjct: 163 VGDGADNV 170


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IGDGAND 9
+GDG ND
Sbjct: 581 VGDGVND 587


>sp|OTC_IGNH4|ORNITHINE carbamoyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 IGDGANDV 10
+GDGA++V
Sbjct: 160 VGDGADNV 167


>sp|PGP_PYRHO|PHOSPHOGLYCOLATE phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IGDGANDV 10
+GDG ND+
Sbjct: 175 VGDGENDL 182


>sp|SECD_METKA|PROTEIN-EXPORT membrane protein SecD|Methanopyrus kandleri (strain AV19 /

Query: 1 LSIGDGANDV 10
LSIG G +D+
Sbjct: 309 LSIGSGVDDL 318


>sp|PGP_PYRFU|PHOSPHOGLYCOLATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IGDGANDV 10
+GDG ND+
Sbjct: 175 VGDGENDL 182


>sp|PGP_METMA|PHOSPHOGLYCOLATE phosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LSIGDGAND 9
++IGD AND
Sbjct: 169 VAIGDSAND 177


>sp|OTC_HYPBU|ORNITHINE carbamoyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 3 IGDGANDV 10
+GDG N+V
Sbjct: 162 VGDGRNNV 169


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 3 IGDGAND 9
+GDG ND
Sbjct: 502 VGDGTND 508


>sp|KDPB_THEAC|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 IGDGAND 9
+GDG ND
Sbjct: 499 VGDGTND 505


>sp|Y1094_METJA|UNCHARACTERIZED protein MJ1094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GDGANDV 10
G GAND+
Sbjct: 67 GKGANDI 73


>sp|PGP_THESM|PHOSPHOGLYCOLATE phosphatase|Thermococcus sibiricus (strain DSM 12597

Query: 3 IGDGANDV 10
IGDG ND+
Sbjct: 176 IGDGENDL 183


>sp|PGP_SULTO|PHOSPHOGLYCOLATE phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LSIGDGANDV 10
++IGD ND+
Sbjct: 160 IAIGDSQNDI 169


>sp|PGP_METHJ|PHOSPHOGLYCOLATE phosphatase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LSIGDGANDV 10
L IGD ND+
Sbjct: 174 LGIGDSENDI 183


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 3 IGDGAND 9
+GDG ND
Sbjct: 616 VGDGIND 622


>sp|PGP_METKA|PHOSPHOGLYCOLATE phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 1 LSIGDGAND 9
++IGDG ND
Sbjct: 175 VAIGDGDND 183


>sp|PGP_METAC|PHOSPHOGLYCOLATE phosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LSIGDGANDV 10
++IGD ND+
Sbjct: 169 VAIGDSENDI 178


>sp|PGP_METBU|PHOSPHOGLYCOLATE phosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LSIGDGAND 9
L+IGD ND
Sbjct: 169 LAIGDSCND 177


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 4 GDGAND 9
GDG ND
Sbjct: 557 GDGVND 562


>sp|Y978_META3|UPF0285 protein Maeo_0978|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 SIGDGANDV 10
S+GDG N++
Sbjct: 61 SMGDGINEI 69


>sp|PGP_HALLT|PHOSPHOGLYCOLATE phosphatase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LSIGDGANDV 10
++IGD NDV
Sbjct: 171 VAIGDSENDV 180


>sp|PYRB_METKA|ASPARTATE carbamoyltransferase catalytic subunit|Methanopyrus kandleri

Query: 1 LSIGDGAN 8
++ GDGAN
Sbjct: 126 INAGDGAN 133




212|Sequence|1056|1065|GANDVSMIQA

>sp|SERB_METJA|PHOSPHOSERINE phosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GANDVSMIQ 9
GAND+SM +
Sbjct: 168 GANDISMFK 176


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 GANDVSMIQ 9
A+DV+MIQ
Sbjct: 288 AAHDVAMIQ 296




213|Sequence|1061|1070|SMIQAADIGI

>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 3 IQAADIGI 10
I AADIGI
Sbjct: 85 IVAADIGI 92




214|Sequence|1066|1075|ADIGIGISGQ

>sp|GGR_METB6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoregula boonei (strain DSM 21154

Query: 1 ADIGIGISGQ 10
A++GIGISG+
Sbjct: 219 ANVGIGISGR 228


>sp|Y1157_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 IGIGISG 9
IGIGISG
Sbjct: 85 IGIGISG 91


>sp|NCPP_SACI4|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 ADIGIGISG 9
ADIG+GI G
Sbjct: 65 ADIGLGIEG 73


>sp|GGR_METMJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ADIGIGISGQ 10
A++GIGISG+
Sbjct: 219 ANVGIGISGR 228


>sp|NCPP_SACI7|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 ADIGIGISG 9
ADIG+GI G
Sbjct: 65 ADIGLGIEG 73


>sp|NCPP_SACI6|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 ADIGIGISG 9
ADIG+GI G
Sbjct: 65 ADIGLGIEG 73


>sp|NCPP_SACI3|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 ADIGIGISG 9
ADIG+GI G
Sbjct: 65 ADIGLGIEG 73


>sp|NCPP_SACI2|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 ADIGIGISG 9
ADIG+GI G
Sbjct: 65 ADIGLGIEG 73


>sp|NCPP_SACI1|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 ADIGIGISG 9
ADIG+GI G
Sbjct: 65 ADIGLGIEG 73


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 ADIGIGISGQ 10
A++G+GISG+
Sbjct: 219 ANVGLGISGK 228


>sp|NCPP_SACS2|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus solfataricus

Query: 1 ADIGIGISG 9
ADIG+GI G
Sbjct: 65 ADIGLGIEG 73


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ADIGIGI 7
ADIG+G+
Sbjct: 468 ADIGVGV 474


>sp|GGR_METLZ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ADIGIGISG 9
A++GIGI+G
Sbjct: 219 ANVGIGIAG 227


>sp|PRIL_SACS2|DNA primase large subunit PriL|Saccharolobus solfataricus (strain ATCC

Query: 2 DIGIGISG 9
DIG G+SG
Sbjct: 240 DIGKGLSG 247


>sp|HCGF_METLZ|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanocorpusculum labreanum

Query: 1 ADIGIGISG 9
ADIGIG +
Sbjct: 98 ADIGIGTTA 106


>sp|NCPP_KORCO|PROBABLE inosine/xanthosine triphosphatase|Korarchaeum cryptofilum (strain

Query: 1 ADIGIGISG 9
AD G+GI G
Sbjct: 63 ADFGVGIEG 71


>sp|Y410_METJA|UNCHARACTERIZED ATP-binding protein MJ0410|Methanocaldococcus jannaschii (strain

Query: 2 DIGIGISG 9
D+GIG++G
Sbjct: 161 DLGIGLTG 168


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 4 GIGISG 9
GIGISG
Sbjct: 112 GIGISG 117


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 4 GIGISG 9
GIGISG
Sbjct: 112 GIGISG 117


>sp|TOP6B_THEGJ|TYPE 2 DNA topoisomerase 6|Thermococcus gammatolerans (strain DSM 15229

Query: 4 GIGISG 9
GIGISG
Sbjct: 112 GIGISG 117


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GIGISG 9
GIGISG
Sbjct: 112 GIGISG 117


>sp|TOP6B_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GIGISG 9
GIGISG
Sbjct: 112 GIGISG 117


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 4 GIGISG 9
GIGISG
Sbjct: 112 GIGISG 117


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 4 GIGISG 9
GIGISG
Sbjct: 114 GIGISG 119


>sp|HEM3_METJA|PROBABLE porphobilinogen deaminase|Methanocaldococcus jannaschii (strain

Query: 1 ADIGIGI 7
+DIGIG+
Sbjct: 48 SDIGIGV 54


>sp|Y631_ARCFU|UNCHARACTERIZED protein AF_0631|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GIGISGQ 10
G+G+SG+
Sbjct: 15 GVGVSGE 21


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 1 ADIGIGI 7
ADIG+GI
Sbjct: 554 ADIGLGI 560


>sp|GFCR_METBU|TRANSCRIPTIONAL regulator GfcR|Methanococcoides burtonii (strain DSM 6242

Query: 3 IGIGISG 9
IGIG+SG
Sbjct: 94 IGIGLSG 100


>sp|RL5_PYRAE|LARGE ribosomal subunit protein uL5|Pyrobaculum aerophilum (strain ATCC

Query: 2 DIGIGISGQ 10
+IG+G SG+
Sbjct: 26 NIGVGASGE 34




215|Sequence|1071|1080|GISGQEGMQA

>sp|PYRI_PYRAE|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum aerophilum

Query: 1 GISGQEGMQ 9
GISG+EG++
Sbjct: 32 GISGKEGLR 40


>sp|PYRI_PYRCJ|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum calidifontis

Query: 1 GISGQEGMQ 9
GI+G+EG++
Sbjct: 32 GITGREGLR 40


>sp|PYRI_PYRIL|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum islandicum

Query: 1 GISGQEGMQ 9
GI+G+EG++
Sbjct: 32 GITGKEGVR 40


>sp|PYRI_STAMF|ASPARTATE carbamoyltransferase regulatory chain|Staphylothermus marinus

Query: 1 GISGQEGMQ 9
GI+G EG++
Sbjct: 40 GITGSEGLR 48


>sp|PYRI_PYRNV|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum neutrophilum

Query: 1 GISGQEGMQ 9
GI+G+EG++
Sbjct: 32 GITGREGVR 40




216|Sequence|1076|1085|EGMQAVMSSD

>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EGMQAVMS 8
EG+Q +MS
Sbjct: 436 EGLQGIMS 443




217|Sequence|1081|1090|VMSSDFAITR

***** No hits found ******


218|Sequence|1086|1095|FAITRFKHLK

>sp|PYRI_METS5|ASPARTATE carbamoyltransferase regulatory chain|Metallosphaera sedula (strain

Query: 2 AITRFKHLK 10
AITRF+ LK
Sbjct: 124 AITRFRTLK 132


>sp|RS3A_PYRIL|SMALL ribosomal subunit protein eS1|Pyrobaculum islandicum (strain DSM

Query: 2 AITRFKHLK 10
AITRFK L+
Sbjct: 87 AITRFKGLE 95


>sp|KTHY_THEVO|PROBABLE thymidylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FAITRFKHLK 10
F + R+KH K
Sbjct: 55 FTLDRYKHQK 64


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 2 AITRFKHLK 10
AIT KHL+
Sbjct: 956 AITLLKHLR 964


>sp|RS3A_PYRAE|SMALL ribosomal subunit protein eS1|Pyrobaculum aerophilum (strain ATCC

Query: 2 AITRFKHLK 10
A+TRFK L+
Sbjct: 87 ALTRFKGLE 95


>sp|RS3A_PYRAR|SMALL ribosomal subunit protein eS1|Pyrobaculum arsenaticum (strain DSM

Query: 2 AITRFKHLK 10
A+TRFK L+
Sbjct: 87 ALTRFKGLE 95




219|Sequence|1091|1100|FKHLKKLLLV

>sp|ASRAC_PYRHO|ALANINE/SERINE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FKHLKKLL 8
FK LKKLL
Sbjct: 262 FKELKKLL 269


>sp|PCNA1_PYRAE|DNA polymerase sliding clamp 1|Pyrobaculum aerophilum (strain ATCC

Query: 1 FKHLKKLL 8
FK LKKLL
Sbjct: 74 FKELKKLL 81


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FKHLKKLL 8
++H+KKLL
Sbjct: 186 YEHIKKLL 193




220|Sequence|1096|1105|KLLLVHGHWC

>sp|NFI_METKA|ENDONUCLEASE V|Methanopyrus kandleri (strain AV19 /

Query: 2 LLLVHGH 8
LL VHGH
Sbjct: 101 LLFVHGH 107


>sp|Y1347_HALLT|UPF0173 metal-dependent hydrolase Hlac_1347|Halorubrum lacusprofundi

Query: 2 LLLVHGH 8
LLL HGH
Sbjct: 43 LLLTHGH 49


>sp|RS4_METST|SMALL ribosomal subunit protein uS4|Methanosphaera stadtmanae (strain

Query: 1 KLLLVHGH 8
+L +VHGH
Sbjct: 122 RLFVVHGH 129


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KLLLVHGHW 9
K+L HG+W
Sbjct: 112 KVLTEHGYW 120


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 1 KLLLVHGHW 9
K+L HG+W
Sbjct: 104 KVLTEHGYW 112


>sp|Y1118_PICTO|UPF0173 metal-dependent hydrolase PTO1118|Picrophilus torridus (strain

Query: 2 LLLVHGHW 9
+LL HGH+
Sbjct: 43 ILLTHGHF 50


>sp|LYSZ_METS5|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KLLLVHG 7
KL+LVHG
Sbjct: 28 KLILVHG 34


>sp|IPK_METJA|ISOPENTENYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLLLVHG 7
KL+LVHG
Sbjct: 48 KLILVHG 54


>sp|RS4_THESM|SMALL ribosomal subunit protein uS4|Thermococcus sibiricus (strain DSM

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 124 LIVHGH 129


>sp|RS4_THEON|SMALL ribosomal subunit protein uS4|Thermococcus onnurineus (strain NA1)

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 124 LIVHGH 129


>sp|RS4_THEKO|SMALL ribosomal subunit protein uS4|Thermococcus kodakarensis (strain

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 124 LIVHGH 129


>sp|RS4_THEGJ|SMALL ribosomal subunit protein uS4|Thermococcus gammatolerans (strain

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 124 LIVHGH 129


>sp|RS4_SULTO|SMALL ribosomal subunit protein uS4|Sulfurisphaera tokodaii (strain DSM

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 125 LIVHGH 130


>sp|RS4_PYRHO|SMALL ribosomal subunit protein uS4|Pyrococcus horikoshii (strain ATCC

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 124 LIVHGH 129


>sp|RS4_PYRFU|SMALL ribosomal subunit protein uS4|Pyrococcus furiosus (strain ATCC

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 124 LIVHGH 129


>sp|RS4_PYRAB|SMALL ribosomal subunit protein uS4|Pyrococcus abyssi (strain GE5 /

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 124 LIVHGH 129


>sp|RS4_METVS|SMALL ribosomal subunit protein uS4|Methanococcus vannielii (strain ATCC

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 125 LIVHGH 130


>sp|RS4_METS5|SMALL ribosomal subunit protein uS4|Metallosphaera sedula (strain ATCC

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 125 LIVHGH 130


>sp|RS4_METJA|SMALL ribosomal subunit protein uS4|Methanocaldococcus jannaschii (strain

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 126 LIVHGH 131


>sp|RS4_HYPBU|SMALL ribosomal subunit protein uS4|Hyperthermus butylicus (strain DSM

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 124 LIVHGH 129


>sp|RS4_CALMQ|SMALL ribosomal subunit protein uS4|Caldivirga maquilingensis (strain

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 127 LIVHGH 132


>sp|RS4_PYRAR|SMALL ribosomal subunit protein uS4|Pyrobaculum arsenaticum (strain DSM

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 127 LIVHGH 132


>sp|RS4_METS3|SMALL ribosomal subunit protein uS4|Methanobrevibacter smithii (strain

Query: 1 KLLLVHGH 8
++ +VHGH
Sbjct: 122 RMFVVHGH 129


>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 5 VHGHW 9
VH HW
Sbjct: 328 VHSHW 332


>sp|Y300_HALMA|UPF0173 metal-dependent hydrolase rrnAC0300|Haloarcula marismortui

Query: 2 LLLVHGH 8
+LL HGH
Sbjct: 43 VLLTHGH 49


>sp|Y2513_HALS3|UPF0173 metal-dependent hydrolase OE_2513F|Halobacterium salinarum

Query: 2 LLLVHGH 8
+LL HGH
Sbjct: 43 VLLTHGH 49


>sp|Y2132_NATPD|UPF0173 metal-dependent hydrolase NP_2132A|Natronomonas pharaonis (strain

Query: 2 LLLVHGH 8
+LL HGH
Sbjct: 44 VLLTHGH 50


>sp|Y1038_HALSA|UPF0173 metal-dependent hydrolase VNG_1038C|Halobacterium salinarum

Query: 2 LLLVHGH 8
+LL HGH
Sbjct: 43 VLLTHGH 49


>sp|RS4_AERPE|SMALL ribosomal subunit protein uS4|Aeropyrum pernix (strain ATCC 700893

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 125 LVVHGH 130


>sp|COFC_METLZ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 LLVHGH 8
L++HGH
Sbjct: 176 LMIHGH 181


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain

Query: 1 KLLLVHGHWC 10
KL+ +HG C
Sbjct: 58 KLIWIHGSEC 67


>sp|RS4_PYRAE|SMALL ribosomal subunit protein uS4|Pyrobaculum aerophilum (strain ATCC

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 127 LIVHGH 132


>sp|MTAD_PYRFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KLLLVHGHW 9
KL+ HG W
Sbjct: 238 KLIAAHGVW 246


>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KLLLVHGHW 9
KL+ HG W
Sbjct: 240 KLIAAHGIW 248


>sp|MTAD_PYRAB|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus abyssi (strain GE5 /

Query: 1 KLLLVHGHW 9
KL+ HG W
Sbjct: 243 KLIAAHGIW 251


>sp|RS4_SACI7|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 3 LLVHGH 8
L++HGH
Sbjct: 125 LIIHGH 130


>sp|RS4_SACI6|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 3 LLVHGH 8
L++HGH
Sbjct: 125 LIIHGH 130


>sp|RS4_SACI4|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 3 LLVHGH 8
L++HGH
Sbjct: 125 LIIHGH 130


>sp|RS4_SACI3|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 3 LLVHGH 8
L++HGH
Sbjct: 125 LIIHGH 130


>sp|RS4_SACI2|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 3 LLVHGH 8
L++HGH
Sbjct: 125 LIIHGH 130


>sp|RS4_SACI1|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 3 LLVHGH 8
L++HGH
Sbjct: 125 LIIHGH 130


>sp|RS4_PYRNV|SMALL ribosomal subunit protein uS4|Pyrobaculum neutrophilum (strain DSM

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 127 LIVHGH 132


>sp|NIFH_METMJ|NITROGENASE iron protein|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 LLVHGHW 9
+L+HG W
Sbjct: 46 MLMHGTW 52


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KLLLVHGHW 9
++L HG+W
Sbjct: 104 RVLTEHGYW 112


>sp|TRPD_CALMQ|ANTHRANILATE phosphoribosyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 LLLVHG 7
LLLVHG
Sbjct: 214 LLLVHG 219


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 4 LVHGH 8
LVHGH
Sbjct: 126 LVHGH 130


>sp|RS4_PYRIL|SMALL ribosomal subunit protein uS4|Pyrobaculum islandicum (strain DSM

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 127 LVVHGH 132


>sp|RS4_STAMF|SMALL ribosomal subunit protein uS4|Staphylothermus marinus (strain ATCC

Query: 3 LLVHGH 8
L++HGH
Sbjct: 124 LIIHGH 129


>sp|RS4_PYRCJ|SMALL ribosomal subunit protein uS4|Pyrobaculum calidifontis (strain DSM

Query: 3 LLVHGH 8
L+VHGH
Sbjct: 127 LVVHGH 132


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 5 VHGHW 9
++GHW
Sbjct: 302 IYGHW 306


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 5 VHGHW 9
++GHW
Sbjct: 303 IYGHW 307


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 5 VHGHW 9
++GHW
Sbjct: 303 IYGHW 307


>sp|THYX_SACS2|FLAVIN-DEPENDENT thymidylate synthase|Saccharolobus solfataricus (strain ATCC

Query: 4 LVHGHW 9
++HG+W
Sbjct: 50 ILHGYW 55


>sp|THYX_SULTO|FLAVIN-DEPENDENT thymidylate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 LVHGHW 9
++HG+W
Sbjct: 49 ILHGYW 54


>sp|GLYA_PYRAR|SERINE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM

Query: 2 LLLVHGHW 9
++LVH +W
Sbjct: 12 VVLVHNNW 19


>sp|Y1488_ARCFU|UNCHARACTERIZED protein AF_1488|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KLLLVHGHW 9
KL+L G+W
Sbjct: 138 KLMLEDGNW 146


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 1 KLLLVHGHW 9
K+L HG W
Sbjct: 107 KILTEHGCW 115




221|Sequence|1101|1110|HGHWCYSRLA

>sp|CAS6L_PYRHO|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6nc|Pyrococcus

Query: 1 HGHWCYSRL 9
HG W +SR+
Sbjct: 47 HGFWTFSRI 55


>sp|Y864_THEVO|UPF0173 metal-dependent hydrolase TV0864|Thermoplasma volcanium (strain

Query: 1 HGHWCYS 7
HGH C+S
Sbjct: 8 HGHACFS 14


>sp|Y764_THEAC|UPF0173 metal-dependent hydrolase Ta0764|Thermoplasma acidophilum (strain

Query: 1 HGHWCYS 7
HGH C+S
Sbjct: 9 HGHACFS 15


>sp|Y1118_PICTO|UPF0173 metal-dependent hydrolase PTO1118|Picrophilus torridus (strain

Query: 1 HGHWCYS 7
HGH C+S
Sbjct: 6 HGHACFS 12


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 2 GHWCYS 7
GHW YS
Sbjct: 384 GHWGYS 389


>sp|CAS6L_PYRFU|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6|Pyrococcus

Query: 1 HGHWCYS 7
HG+W +S
Sbjct: 47 HGYWTFS 53


>sp|Y804_METJA|UNCHARACTERIZED protein MJ0804|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WCYSRL 9
+CYSRL
Sbjct: 56 YCYSRL 61


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 2 GHWCYSR 8
HW Y R
Sbjct: 750 AHWVYER 756


>sp|METE_THEVO|METHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 HWCYSR 8
H CYSR
Sbjct: 211 HVCYSR 216


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 2 GHWCYSRLA 10
GH+ SRLA
Sbjct: 318 GHYYLSRLA 326


>sp|GPMA_METAC|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 3 HWCYS 7
HWC S
Sbjct: 149 HWCRS 153


>sp|RIO2_METJA|RIO-TYPE serine/threonine-protein kinase Rio2|Methanocaldococcus jannaschii

Query: 1 HGHWCYSR 8
HG C++R
Sbjct: 97 HGRTCFTR 104




222|Sequence|1106|1115|YSRLARMVVY

>sp|PUR7_METTH|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 YSRLARMVV 9
Y R+ARM++
Sbjct: 228 YRRVARMIL 236


>sp|TFE_PYRNV|TRANSCRIPTION factor E|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 YSRLARMVV 9
Y RLAR VV
Sbjct: 22 YGRLARKVV 30


>sp|TFE_PYRAR|TRANSCRIPTION factor E|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YSRLARMVV 9
Y RLAR +V
Sbjct: 22 YGRLARKIV 30




223|Sequence|1111|1120|RMVVYYLYKN

>sp|ENO_PICTO|ENOLASE torridus (strain ATCC 700027

Query: 5 YYLYKN 10
YY+YKN
Sbjct: 244 YYIYKN 249


>sp|DHYS_METVS|PROBABLE deoxyhypusine synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 RMVVYYLYKN 10
+ +VY+ YKN
Sbjct: 195 KSIVYHAYKN 204


>sp|DHYS_PYRHO|PROBABLE deoxyhypusine synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RMVVYYLYKN 10
+ V+Y+ YKN
Sbjct: 194 KSVIYWAYKN 203


>sp|Y264_METJA|UNCHARACTERIZED protein MJ0264|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VYYLYKN 10
+YYLY N
Sbjct: 145 LYYLYAN 151


>sp|DHYS_THEKO|PROBABLE deoxyhypusine synthase|Thermococcus kodakarensis (strain ATCC

Query: 1 RMVVYYLYK 9
R V+Y+ YK
Sbjct: 195 RSVIYWAYK 203


>sp|NADE_PYRFU|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RMVVYYLYKN 10
RMV+ Y Y N
Sbjct: 111 RMVLLYSYAN 120


>sp|OGT_SULTO|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 MVVYYLYKN 10
M+VY LYK+
Sbjct: 1 MIVYGLYKS 9


>sp|EPPA_METTH|PREPILIN peptidase EppA|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 MVVYYLYKN 10
++VY LYKN
Sbjct: 222 IIVYSLYKN 230


>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 RMVVYYLYK 9
R+V YY +K
Sbjct: 544 RLVFYYAHK 552


>sp|Y366_METJA|UNCHARACTERIZED protein MJ0366|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RMVVYYLYKN 10
+ +YLYKN
Sbjct: 11 KRATFYLYKN 20


>sp|DHYS_PYRFU|PROBABLE deoxyhypusine synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RMVVYYLYKN 10
+ ++Y+ Y+N
Sbjct: 195 KSIIYWAYRN 204




224|Sequence|1116|1125|YLYKNVCYVN

>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YLYKNVC 7
YLYKNVC
Sbjct: 15 YLYKNVC 21


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 NVCYVN 10
N+CYVN
Sbjct: 333 NICYVN 338


>sp|Y1254_METJA|UNCHARACTERIZED protein MJ1254|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YLYKNVCYVN 10
+LYKN Y+N
Sbjct: 18 FLYKNSSYIN 27


>sp|MOBA_PYRAB|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus abyssi (strain

Query: 4 KNVCYV 9
KNVCY+
Sbjct: 159 KNVCYI 164


>sp|QUEC_THEKO|7-CYANO-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YLYKNVCYV 9
Y Y N CY+
Sbjct: 188 YEYSNSCYM 196


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 2 LYKNVCYV 9
L KN+CY+
Sbjct: 484 LLKNMCYL 491


>sp|QUEC_PYRHO|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YLYKNVCY 8
Y Y N CY
Sbjct: 188 YEYSNSCY 195


>sp|QUEC_PYRFU|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YLYKNVCY 8
Y Y N CY
Sbjct: 189 YEYSNSCY 196


>sp|QUEC_PYRAB|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 YLYKNVCY 8
Y Y N CY
Sbjct: 188 YEYSNSCY 195


>sp|ARGC_METJA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YKNVCY 8
YKN+C+
Sbjct: 55 YKNLCF 60


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YLYKNV 6
YLY+NV
Sbjct: 374 YLYRNV 379


>sp|Y366_METJA|UNCHARACTERIZED protein MJ0366|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YLYKNV 6
YLYKN+
Sbjct: 16 YLYKNI 21


>sp|ARGJ_METJA|GLUTAMATE N-acetyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 YKNVCY 8
++NVCY
Sbjct: 380 FENVCY 385


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 2 LYKNVCYV 9
LY NV YV
Sbjct: 101 LYANVIYV 108


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 YLYKNVC 7
+ YKN+C
Sbjct: 634 FTYKNLC 640


>sp|CDC6D_HALMA|ORC1-TYPE DNA replication protein 4|Haloarcula marismortui (strain ATCC 43049

Query: 2 LYKNVC 7
+YKN+C
Sbjct: 442 IYKNLC 447


>sp|MOBA_PYRHO|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus horikoshii

Query: 5 NVCYVN 10
NVCY++
Sbjct: 162 NVCYIS 167




225|Sequence|1121|1130|VCYVNLLFWY

>sp|HYD2D_PYRFU|SULFHYDROGENASE 2 subunit delta|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CYVNLLFWY 10
C +NLLF Y
Sbjct: 14 CALNLLFLY 22


>sp|FER_SULAC|ZINC-CONTAINING ferredoxin|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 CYVNLLFWY 10
C VN+ WY
Sbjct: 55 CPVNVFQWY 63


>sp|FER_ACIAM|ZINC-CONTAINING ferredoxin|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 CYVNLLFWY 10
C VN+ WY
Sbjct: 55 CPVNVFQWY 63


>sp|FER1_SULTO|ZINC-CONTAINING ferredoxin-1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 CYVNLLFWY 10
C VN+ WY
Sbjct: 56 CPVNVFQWY 64


>sp|TRPA_HALSA|TRYPTOPHAN synthase alpha chain|Halobacterium salinarum (strain ATCC 700922

Query: 1 VC--YVNLLFWY 10
VC Y NLLF Y
Sbjct: 92 VCMTYYNLLFQY 103


>sp|TRPA_HALS3|TRYPTOPHAN synthase alpha chain|Halobacterium salinarum (strain ATCC 29341

Query: 1 VC--YVNLLFWY 10
VC Y NLLF Y
Sbjct: 92 VCMTYYNLLFQY 103




226|Sequence|1126|1135|LLFWYQFFCG

>sp|PIP_THEVO|PROLINE iminopeptidase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LLFWYQFFCG 10
+LF+ QF CG
Sbjct: 60 VLFYDQFGCG 69


>sp|PIP_THEAC|PROLINE iminopeptidase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LLFWYQFFCG 10
+LF+ QF CG
Sbjct: 58 VLFYDQFGCG 67


>sp|PIP_SACS2|PROLINE iminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LLFWYQFFCG 10
+LF+ QF CG
Sbjct: 68 VLFYDQFGCG 77


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 WYQFFCG 10
W +F+CG
Sbjct: 273 WREFWCG 279


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 3 FWYQFF 8
FWY F+
Sbjct: 307 FWYSFY 312


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WYQFFC 9
WY+F C
Sbjct: 503 WYRFSC 508


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 3 FWYQFF 8
FWY F+
Sbjct: 309 FWYSFY 314


>sp|SECF_HALWD|PROTEIN-EXPORT membrane protein SecF|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LLFWYQF 7
LL WY+F
Sbjct: 280 LLRWYKF 286


>sp|SECF_HALVD|PROTEIN-EXPORT membrane protein SecF|Haloferax volcanii (strain ATCC 29605

Query: 1 LLFWYQF 7
LL WY+F
Sbjct: 276 LLRWYKF 282


>sp|Y1031_SACS2|UNCHARACTERIZED solute-binding protein SSO1031|Saccharolobus solfataricus (strain

Query: 3 FWYQFF 8
+WY FF
Sbjct: 198 YWYNFF 203


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 3 FWYQFFCG 10
+WY F+ G
Sbjct: 587 YWYDFWTG 594


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 YQFFCG 10
YQF CG
Sbjct: 529 YQFGCG 534


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WYQFFC 9
W+Q FC
Sbjct: 488 WFQPFC 493


>sp|Y136_ARCFU|UNCHARACTERIZED protein AF_0136|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WYQFFC 9
W Q FC
Sbjct: 132 WIQIFC 137


>sp|Y2034_SULTO|UNCHARACTERIZED solute-binding protein STK_20340|Sulfurisphaera tokodaii (strain

Query: 3 FWYQFF 8
+WY FF
Sbjct: 171 YWYNFF 176


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 1 LLFWYQFFCG 10
L F Y FF G
Sbjct: 370 LAFTYSFFFG 379




227|Sequence|1131|1140|QFFCGFSSST

>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 4 CGFSSST 10
CGFS++T
Sbjct: 432 CGFSAAT 438


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 4 CGFSSST 10
CGFS++T
Sbjct: 432 CGFSAAT 438


>sp|COFH_METPE|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanosphaerula palustris (strain

Query: 3 FCGFS 7
FCGFS
Sbjct: 76 FCGFS 80


>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain

Query: 3 FCGFS 7
FCGFS
Sbjct: 76 FCGFS 80


>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FFCGFSSST 10
+CGF++ T
Sbjct: 99 LYCGFAAGT 107


>sp|RSMA_SACS2|PROBABLE ribosomal RNA small subunit|Saccharolobus solfataricus (strain ATCC

Query: 3 FCGFSSS 9
CGFSS+
Sbjct: 167 LCGFSSN 173


>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 4 CGFSSST 10
CG SSST
Sbjct: 414 CGTSSST 420


>sp|Y933_METJA|UNCHARACTERIZED membrane protein MJ0933|Methanocaldococcus jannaschii (strain

Query: 2 FFCGF 6
+FCGF
Sbjct: 49 YFCGF 53




228|Sequence|1136|1145|FSSSTMIDYW

>sp|PHAC_HALMA|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula marismortui (strain ATCC 43049

Query: 2 SSSTMIDYW 10
SSST D W
Sbjct: 352 SSSTHADLW 360




229|Sequence|1141|1150|MIDYWQMIFF

>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IDYWQMI 8
IDYW ++
Sbjct: 121 IDYWSLV 127


>sp|Y771_METTH|UPF0047 protein MTH_771|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 WQMIFF 10
WQ IFF
Sbjct: 119 WQSIFF 124


>sp|GLME_HALSA|GLUTAMATE mutase epsilon subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 IDYWQMI 8
I+YWQ +
Sbjct: 187 IEYWQYV 193


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DYWQMI 8
DYWQ+I
Sbjct: 219 DYWQLI 224


>sp|Y1081_METJA|UPF0047 protein MJ1081|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MIDYWQMIFF 10
++ WQ IFF
Sbjct: 110 LLGTWQGIFF 119


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 IDYWQMIF 9
+DYW+ +
Sbjct: 353 VDYWRFLL 360




230|Sequence|1146|1155|QMIFFNLFFT

***** No hits found ******


231|Sequence|1151|1160|NLFFTSLPPL

>sp|Y1628_METJA|UNCHARACTERIZED protein MJ1628|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NLFFTSLPP 9
+LFF LPP
Sbjct: 308 SLFFQKLPP 316


>sp|Y1361_METJA|UNCHARACTERIZED protein MJ1361|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NLFFTSLP 8
N +FT+LP
Sbjct: 177 NFYFTALP 184


>sp|G1PDH_METS3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanobrevibacter smithii (strain ATCC

Query: 1 NLFFTSLP 8
N+FF S+P
Sbjct: 108 NVFFVSMP 115


>sp|TRUD2_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain DSM

Query: 4 FTSLPP 9
FT+LPP
Sbjct: 256 FTALPP 261


>sp|TRUD_METM5|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain C5

Query: 4 FTSLPP 9
FT+LPP
Sbjct: 256 FTALPP 261


>sp|Y179_ARCFU|UNCHARACTERIZED protein AF_0179|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FFTSLP 8
FFTS+P
Sbjct: 109 FFTSMP 114


>sp|Y182_AERPE|UPF0235 protein APE_0182.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 LFFTSLPPL 10
+F+T PPL
Sbjct: 42 VFYTDEPPL 50


>sp|GSA_METPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 LFFTSLPP 9
LFF S PP
Sbjct: 353 LFFRSSPP 360


>sp|BIOF_METVS|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus vannielii (strain

Query: 2 LFFTSLPP 9
++ TSLPP
Sbjct: 253 IYSTSLPP 260


>sp|BIOF_META3|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus aeolicus (strain ATCC

Query: 2 LFFTSLPP 9
++ TSLPP
Sbjct: 258 IYSTSLPP 265


>sp|QUEC_SACS2|7-CYANO-7-DEAZAGUANINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NLFFTSL 7
+LFFTSL
Sbjct: 193 SLFFTSL 199


>sp|TRUD_METVS|PROBABLE tRNA pseudouridine synthase D|Methanococcus vannielii (strain ATCC

Query: 4 FTSLPP 9
FT+LPP
Sbjct: 256 FTALPP 261


>sp|Y1060_METJA|UNCHARACTERIZED protein MJ1060|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LFFTSLPPL 10
LF+ + PPL
Sbjct: 20 LFYNTYPPL 28




232|Sequence|1156|1165|SLPPLVFGVL

>sp|SYFB_METM7|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C7 /

Query: 1 SLPPLVFGVL 10
SLPP++ G L
Sbjct: 214 SLPPIINGTL 223


>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 SLPPLVFGVL 10
SLPP++ G L
Sbjct: 214 SLPPIINGTL 223


>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 SLPPLVFGVL 10
S+PP++ G L
Sbjct: 214 SMPPIINGTL 223


>sp|NADK_HALSA|NAD kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SLPPLVFGV 9
+LPPLV G+
Sbjct: 211 ALPPLVTGL 219


>sp|NADK_HALS3|NAD kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 SLPPLVFGV 9
+LPPLV G+
Sbjct: 211 ALPPLVTGL 219


>sp|PYRI_METHJ|ASPARTATE carbamoyltransferase regulatory chain|Methanospirillum hungatei

Query: 2 LPPLVFGVL 10
+PP++ GVL
Sbjct: 103 IPPVLIGVL 111


>sp|SYFB_METM6|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C6 /

Query: 1 SLPPLVFGVL 10
S+PP++ G L
Sbjct: 214 SMPPIINGTL 223


>sp|SYFB_METM5|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C5 /

Query: 1 SLPPLVFGVL 10
S+PP++ G L
Sbjct: 214 SMPPIINGTL 223


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SLPPLVFGVL 10
S P L+FGV+
Sbjct: 223 SRPELIFGVV 232


>sp|SYFB_THEVO|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SLPPLVFGVL 10
S+PP+V G++
Sbjct: 200 SVPPIVNGIM 209


>sp|RS7_PYRNV|SMALL ribosomal subunit protein uS7|Pyrobaculum neutrophilum (strain

Query: 3 PPLVFG 8
PPL+FG
Sbjct: 39 PPLLFG 44


>sp|NARC_HALMT|PROBABLE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 2 LPPLVFGVL 10
LP LVFG++
Sbjct: 373 LPTLVFGII 381


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LPPLVFGV 9
L PLVFG+
Sbjct: 1226 LHPLVFGL 1233


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SLPPLVFG 8
+LPPL+ G
Sbjct: 345 ALPPLIIG 352


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 2 LPPLVFGV 9
+PP+ +GV
Sbjct: 864 IPPVAYGV 871


>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SLPPLVFGVL 10
S+PP++ G L
Sbjct: 208 SMPPIINGEL 217


>sp|PYRC_THEAC|DIHYDROOROTASE acidophilum (strain ATCC 25905

Query: 3 PPLVFGV 9
PP +FG+
Sbjct: 331 PPSIFGI 337


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 3 PPLVFGV 9
PP +FG+
Sbjct: 329 PPSIFGI 335


>sp|SYFB_METBU|PHENYLALANINE--TRNA ligase beta subunit|Methanococcoides burtonii (strain DSM 6242

Query: 1 SLPPLVFGVL 10
S PP++ G L
Sbjct: 204 SFPPIINGTL 213


>sp|SYFB_METTH|PHENYLALANINE--TRNA ligase beta subunit|Methanothermobacter thermautotrophicus (strain

Query: 1 SLPPLVFGVL 10
S+PP++ G L
Sbjct: 206 SMPPIINGEL 215


>sp|BRIX_ARCFU|PROBABLE Brix domain-containing ribosomal biogenesis|Archaeoglobus fulgidus

Query: 2 LPPLVFGVL 10
+ PLVFG +
Sbjct: 97 IDPLVFGAI 105


>sp|AGLB2_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SLPPLVFGVL 10
+ P++FGVL
Sbjct: 94 KITPVIFGVL 103


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SLPPLVFGVL 10
S PP++ G L
Sbjct: 204 SFPPIINGTL 213


>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 SLPPLVFGVL 10
S PP++ G L
Sbjct: 204 SFPPIINGTL 213




233|Sequence|1161|1170|VFGVLDKDIS

>sp|SYC_SULAC|CYSTEINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VFGVLDKDIS 10
VFGV+D++ S
Sbjct: 405 VFGVMDEEFS 414


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 VFGVLDKDIS 10
V GVLD+D++
Sbjct: 405 VLGVLDEDLA 414


>sp|TSR3_SULTO|16S rRNA aminocarboxypropyltransferase|Sulfurisphaera tokodaii

Query: 1 VFGVLDKDIS 10
+ +LDKDI+
Sbjct: 45 ILSILDKDIA 54


>sp|AMZA_NANEQ|ARCHAEMETZINCIN equitans (strain Kin4-M)

Query: 1 VFGVLDKDI 9
VF ++D+DI
Sbjct: 65 VFAIIDEDI 73


>sp|RL3_METBU|LARGE ribosomal subunit protein uL3|Methanococcoides burtonii (strain DSM

Query: 4 VLDKDIS 10
VLDKD+S
Sbjct: 105 VLDKDLS 111


>sp|RS13_HALMA|SMALL ribosomal subunit protein uS13|Haloarcula marismortui (strain

Query: 1 VFGVLDKDI 9
VFG LD D+
Sbjct: 66 VFGKLDDDV 74


>sp|SYC_SULTO|CYSTEINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VFGVLDKD 8
VFGV+D++
Sbjct: 404 VFGVMDEE 411


>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VFGVLDKD 8
VFGV+D++
Sbjct: 406 VFGVMDEE 413


>sp|DHE4_HALSI|NADP-SPECIFIC glutamate dehydrogenase A1|Halobacterium salinarum (Halobacterium

Query: 1 VFGVLDKDIS 10
VF LD+D+S
Sbjct: 200 VFDYLDRDLS 209


>sp|DHE4_HALSA|NADP-SPECIFIC glutamate dehydrogenase A1|Halobacterium salinarum (strain ATCC

Query: 1 VFGVLDKDIS 10
VF LD+D+S
Sbjct: 200 VFDYLDRDLS 209


>sp|GCSPA_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 2 FGVLDKDI 9
+G+LDK+I
Sbjct: 206 YGILDKNI 213


>sp|AROB_PYRFU|3-DEHYDROQUINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FGVLDKDI 9
+G+LDK++
Sbjct: 172 YGILDKEV 179


>sp|QUEC_SACS2|7-CYANO-7-DEAZAGUANINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VFGVLDKD 8
++G+LD+D
Sbjct: 64 LYGILDED 71


>sp|Y1286_METJA|UNCHARACTERIZED protein MJ1286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VFGVLDKD 8
V+G+L KD
Sbjct: 296 VYGILPKD 303


>sp|HCGE_METTM|GUANYLYLPYRIDINOL adenylase HcgE|Methanothermobacter marburgensis (strain ATCC

Query: 1 VFGVLDKDIS 10
VFG+ ++D+S
Sbjct: 138 VFGIGEEDVS 147




234|Sequence|1166|1175|DKDISAETLL

>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KDISAETLL 10
KDI A TLL
Sbjct: 191 KDIGARTLL 199




235|Sequence|1171|1180|AETLLALPEL

>sp|SYC_METAC|CYSTEINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ETLLALPEL 10
ETL ALPEL
Sbjct: 347 ETLKALPEL 355


>sp|SYC_METMA|CYSTEINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ETLLALPEL 10
ETL LPEL
Sbjct: 347 ETLKTLPEL 355


>sp|ANTRP_HALVD|PROBABLE anion ABC transporter permease|Haloferax volcanii (strain ATCC

Query: 1 AETLLALPEL 10
++T+LALP L
Sbjct: 96 SQTILALPVL 105


>sp|GLCDH_HALSA|GLUCOSE 1-dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 AETLLALPE 9
A+TL ALP+
Sbjct: 312 ADTLAALPD 320


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ETLLALPEL 10
+TL+A PEL
Sbjct: 869 KTLMAKPEL 877




236|Sequence|1176|1185|ALPELYKSGQ

>sp|ARGC_META3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LPELYKSG 9
+PELY++G
Sbjct: 86 VPELYETG 93


>sp|ENDA_METMA|TRNA-SPLICING endonuclease|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ALPELYKSG 9
A+ ELYK+G
Sbjct: 19 AVAELYKTG 27


>sp|ENDA_METAC|TRNA-SPLICING endonuclease|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ALPELYKSG 9
A+ ELYK+G
Sbjct: 16 AVAELYKTG 24


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 ELYKSGQ 10
ELYKSG+
Sbjct: 129 ELYKSGE 135


>sp|LYSY_PYRCJ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 LPELYKSG 9
+P+LY+SG
Sbjct: 84 VPQLYESG 91


>sp|CARA_METS5|CARBAMOYL phosphate synthase small chain|Metallosphaera sedula (strain ATCC

Query: 2 LPELYKSG 9
L ELYK+G
Sbjct: 198 LEELYKTG 205


>sp|PGMI_PYRAE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Pyrobaculum aerophilum

Query: 1 ALPELYKSG 9
A+P LY SG
Sbjct: 36 AMPRLYISG 44


>sp|CDC6G_HALMA|ORC1-TYPE DNA replication protein 7|Haloarcula marismortui (strain ATCC 43049

Query: 1 ALPELYKSGQ 10
AL LYKSG+
Sbjct: 252 ALDILYKSGE 261


>sp|Y376_METTP|UPF0282 protein Mthe_0376|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LPELYKSGQ 10
+PE+Y+S +
Sbjct: 245 IPEVYRSAE 253


>sp|Y909_METM5|UPF0305 protein MmarC5_0909|Methanococcus maripaludis (strain C5 /

Query: 2 LPELYKSG 9
LPE YK G
Sbjct: 36 LPEDYKKG 43


>sp|Y221_METM6|UPF0305 protein MmarC6_0221|Methanococcus maripaludis (strain C6 /

Query: 2 LPELYKSG 9
LPE YK G
Sbjct: 36 LPEDYKKG 43


>sp|UPP_PYRAR|URACIL phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ALPELYKSG 9
A+ E+YK+G
Sbjct: 145 AIEEVYKTG 153


>sp|LYSY_PYRIL|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 LPELYKSG 9
+P+LY+SG
Sbjct: 84 VPKLYESG 91


>sp|Y1691_METM7|UPF0305 protein MmarC7_1691|Methanococcus maripaludis (strain C7 /

Query: 2 LPELYKSG 9
LPE YK G
Sbjct: 36 LPEDYKKG 43


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 LPELYKSG 9
+P+LY+SG
Sbjct: 83 VPKLYESG 90


>sp|SYFA_THEON|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus onnurineus (strain NA1)

Query: 3 PELYKSGQ 10
PEL KSG+
Sbjct: 208 PELIKSGK 215


>sp|LYSY_PYRNV|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 LPELYKSG 9
+P+LY+SG
Sbjct: 84 VPKLYESG 91


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PELYKSG 9
PEL+K G
Sbjct: 588 PELFKEG 594


>sp|SYFA_THEKO|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PELYKSGQ 10
PEL KSG+
Sbjct: 208 PELIKSGK 215


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PELYKSG 9
PEL+K G
Sbjct: 590 PELFKEG 596


>sp|TYW32_PYRAB|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 2 LPELYKSGQ 10
LP LYK+ Q
Sbjct: 176 LPRLYKNFQ 184


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 3 PELYKSGQ 10
PEL KSG+
Sbjct: 207 PELIKSGK 214


>sp|SYFA_METMA|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PELYKSG 9
PEL KSG
Sbjct: 206 PELLKSG 212


>sp|SYFA_METBF|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 PELYKSG 9
PEL KSG
Sbjct: 203 PELLKSG 209


>sp|CDC6A_HALMA|ORC1-TYPE DNA replication protein 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 ALPELYKSG 9
AL LYK+G
Sbjct: 270 ALKRLYKAG 278


>sp|SYFA_METAC|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PELYKSG 9
PEL KSG
Sbjct: 203 PELLKSG 209




237|Sequence|1181|1190|YKSGQNSECY

>sp|SERK_STAMF|ATP-DEPENDENT L-serine kinase|Staphylothermus marinus (strain ATCC 43588

Query: 4 GQNSECY 10
G+N+ECY
Sbjct: 153 GKNNECY 159


>sp|Y325_METJA|UNCHARACTERIZED protein MJ0325|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YKSGQNSECY 10
YK G + CY
Sbjct: 33 YKQGDKAVCY 42


>sp|RS7_PYRNV|SMALL ribosomal subunit protein uS7|Pyrobaculum neutrophilum (strain DSM

Query: 1 YKSGQN 6
YK+GQN
Sbjct: 122 YKTGQN 127


>sp|RS7_PYRIL|SMALL ribosomal subunit protein uS7|Pyrobaculum islandicum (strain DSM

Query: 1 YKSGQN 6
YK+GQN
Sbjct: 122 YKTGQN 127


>sp|RS3_SULAC|SMALL ribosomal subunit protein uS3|Sulfolobus acidocaldarius (strain

Query: 1 YKSGQNSE 8
YKSGQ E
Sbjct: 153 YKSGQQLE 160


>sp|RS3_SACS2|SMALL ribosomal subunit protein uS3|Saccharolobus solfataricus (strain

Query: 1 YKSGQNSE 8
YKSGQ E
Sbjct: 153 YKSGQQLE 160




238|Sequence|1186|1195|NSECYNLSTF

>sp|Y762_ARCFU|UNCHARACTERIZED protein AF_0762|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NSECYNLST 9
NSEC+NL+T
Sbjct: 148 NSECFNLTT 156


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 NSECYNLSTF 10
N+ YNLSTF
Sbjct: 729 NNSFYNLSTF 738


>sp|SYR_METB6|ARGININE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 ECYNLST 9
ECY+L+T
Sbjct: 466 ECYDLAT 472


>sp|SERK_STAMF|ATP-DEPENDENT L-serine kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 NSECYNL 7
N+ECY +
Sbjct: 155 NNECYKI 161




239|Sequence|1191|1200|NLSTFWISMV

>sp|MALF_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 2 LSTFWISM 9
+ TFWIS+
Sbjct: 37 MGTFWISL 44




240|Sequence|1196|1205|WISMVDAFYQ

>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 MVDAFYQ 10
MVDAFY+
Sbjct: 590 MVDAFYE 596


>sp|CYSO_AERPE|PROTEIN CysO|Aeropyrum pernix (strain ATCC 700893

Query: 1 WISMVDAFY 9
WI+M+D Y
Sbjct: 305 WINMLDISY 313


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WISMVDAFY 9
W+ M AFY
Sbjct: 230 WVKMFAAFY 238


>sp|HFLX_THEPD|GTPASE HflX|Thermofilum pendens (strain DSM 2475

Query: 3 SMVDAFY 9
++VDAFY
Sbjct: 257 ALVDAFY 263


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 WISMVDAFYQ 10
W SM+ AF++
Sbjct: 482 WPSMLRAFFR 491




241|Sequence|1201|1210|DAFYQSLICF

>sp|Y798_METJA|TPR repeat-containing protein MJ0798|Methanocaldococcus jannaschii

Query: 2 AFYQSLICF 10
A+Y++L C+
Sbjct: 117 AYYEALFCY 125


>sp|PIMT_METTH|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 DAFYQSLI 8
D FYQ L+
Sbjct: 178 DKFYQELV 185


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 1 DAFYQSLIC 9
D FY L+C
Sbjct: 183 DVFYGCLMC 191




242|Sequence|1206|1215|SLICFFIPYL

>sp|MALE_THELN|TREHALOSE/MALTOSE-BINDING protein MalE|Thermococcus litoralis (strain ATCC 51850

Query: 1 SLICFFIPYL 10
SL+C F+ Y+
Sbjct: 219 SLVCDFVEYV 228


>sp|ARGC_METPE|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 CFFIPYL 10
C+F P+L
Sbjct: 217 CYFTPHL 223


>sp|ARGC_METMJ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 CFFIPYL 10
C+F P+L
Sbjct: 217 CYFTPHL 223


>sp|ARGC_METB6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoregula boonei (strain DSM 21154

Query: 4 CFFIPYL 10
C+F P+L
Sbjct: 217 CYFTPHL 223


>sp|ENGB_PYRHO|PROBABLE GTP-binding protein EngB|Pyrococcus horikoshii (strain ATCC

Query: 3 ICFFIPY 9
I FF+PY
Sbjct: 9 IFFFLPY 15


>sp|HMEE_ARCFU|HDR-LIKE menaquinol oxidoreductase cytochrome c|Archaeoglobus fulgidus

Query: 2 LICFFIPY 9
LI FF PY
Sbjct: 15 LIGFFTPY 22


>sp|DGGGP_METLZ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 SLICFFIPYL 10
+++C F+P+L
Sbjct: 210 AVLCSFVPFL 219


>sp|Y486_METJA|UNCHARACTERIZED protein MJ0486|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SLICFFIPYL 10
SL+C F+ +L
Sbjct: 261 SLVCDFLEHL 270


>sp|Y1157_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SLICFFIP 8
LICFF+
Sbjct: 113 KLICFFVD 120




243|Sequence|1211|1220|FIPYLAYKGS

>sp|KPRS_SULAC|RIBOSE-PHOSPHATE pyrophosphokinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IPYLAY 7
IPYLAY
Sbjct: 86 IPYLAY 91


>sp|KPRS_PYRAB|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus abyssi (strain GE5 /

Query: 2 IPYLAY 7
IPYLAY
Sbjct: 84 IPYLAY 89


>sp|EF1A_METAR|ELONGATION factor 1-alpha|Methanocella arvoryzae (strain DSM 22066

Query: 1 FIPYLAYKGS 10
FIP A+KG+
Sbjct: 181 FIPTSAFKGT 190


>sp|KPRS_SULTO|RIBOSE-PHOSPHATE pyrophosphokinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IPYLAY 7
+PYLAY
Sbjct: 86 VPYLAY 91


>sp|KPRS_SACS2|RIBOSE-PHOSPHATE pyrophosphokinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IPYLAY 7
+PYLAY
Sbjct: 86 VPYLAY 91


>sp|RTCA_PYRHO|RNA 3'-terminal phosphate cyclase|Pyrococcus horikoshii (strain ATCC

Query: 1 FIPYLAYKG 9
IP+LA+ G
Sbjct: 288 LIPFLAFSG 296


>sp|RTCA_PYRAB|RNA 3'-terminal phosphate cyclase|Pyrococcus abyssi (strain GE5 /

Query: 1 FIPYLAYKG 9
IP+LA+ G
Sbjct: 288 LIPFLAFSG 296


>sp|HIS7_METHJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PYLAYKGS 10
PYL ++GS
Sbjct: 113 PYLVFEGS 120


>sp|KPRS_PYRHO|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IPYLAY 7
+PYLAY
Sbjct: 84 VPYLAY 89


>sp|TRPA_HALMA|TRYPTOPHAN synthase alpha chain|Haloarcula marismortui (strain ATCC 43049

Query: 1 FIPYLA 6
F+PYLA
Sbjct: 13 FVPYLA 18


>sp|RTCA_THEGJ|RNA 3'-terminal phosphate cyclase|Thermococcus gammatolerans (strain

Query: 1 FIPYLAYKG 9
IP+LA+ G
Sbjct: 289 LIPFLAFAG 297


>sp|RTCA_THEKO|RNA 3'-terminal phosphate cyclase|Thermococcus kodakarensis (strain

Query: 1 FIPYLAYKG 9
IP+LA+ G
Sbjct: 289 LIPFLAFAG 297


>sp|EF1A_METTP|ELONGATION factor 1-alpha|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FIPYLAYKG 9
FIP AY G
Sbjct: 183 FIPVSAYNG 191


>sp|KPRS_PYRFU|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IPYLAY 7
IPY+AY
Sbjct: 81 IPYMAY 86


>sp|TRPA_HALVD|TRYPTOPHAN synthase alpha chain|Haloferax volcanii (strain ATCC 29605

Query: 1 FIPYLA 6
F+PYLA
Sbjct: 13 FVPYLA 18


>sp|EF1A_AERPE|ELONGATION factor 1-alpha|Aeropyrum pernix (strain ATCC 700893

Query: 1 FIPYLAYKG 9
FIP A+KG
Sbjct: 189 FIPVSAWKG 197


>sp|KPRS_METKA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanopyrus kandleri (strain AV19 /

Query: 2 IPYLAY 7
+PY+AY
Sbjct: 85 VPYMAY 90


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FIPYLAYKG 9
F+P YKG
Sbjct: 183 FVPISGYKG 191


>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FIPYLAYKG 9
F+P YKG
Sbjct: 183 FVPISGYKG 191


>sp|Y488_ARCFU|UNCHARACTERIZED protein AF_0488|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FIPYLAYKG 9
F+ YLAY G
Sbjct: 57 FLAYLAYMG 65


>sp|TRPA_NATPD|TRYPTOPHAN synthase alpha chain|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FIPYLA 6
F+PYLA
Sbjct: 12 FVPYLA 17


>sp|LEUD_METTH|3-ISOPROPYLMALATE dehydratase small subunit|Methanothermobacter thermautotrophicus

Query: 1 FIPYLAYKG 9
IPYL KG
Sbjct: 150 LIPYLKKKG 158


>sp|PURO_HALMA|IMP cyclohydrolase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PYLAYKG 9
PY++Y G
Sbjct: 49 PYISYNG 55




244|Sequence|1216|1225|AYKGSDIDVF

>sp|RIBL_METTM|FAD synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 AYKGSDIDVF 10
AY GS+ D+F
Sbjct: 81 AYLGSETDMF 90


>sp|RIBL_METTH|FAD synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 AYKGSDIDVF 10
AY GS+ D+F
Sbjct: 71 AYLGSETDMF 80


>sp|Y169_METJA|UNCHARACTERIZED ATP-binding protein MJ0169|Methanocaldococcus jannaschii (strain

Query: 2 YKGSDIDVF 10
YK SDID+
Sbjct: 93 YKKSDIDLL 101


>sp|CCA_METBF|CCA-ADDING enzyme|Methanosarcina barkeri (strain Fusaro /

Query: 2 YKGSDIDV 9
YKG D+D+
Sbjct: 119 YKGFDVDL 126


>sp|PURA2_METAC|ADENYLOSUCCINATE synthetase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YKGSDID 8
YKG D+D
Sbjct: 348 YKGEDLD 354


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 AYKGSDID 8
AYK S+ID
Sbjct: 137 AYKKSEID 144


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 1 AYKGSDID 8
AYK S+ID
Sbjct: 160 AYKKSEID 167


>sp|DHE4_SACSH|NADP-SPECIFIC glutamate dehydrogenase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 YKGSDIDV 9
Y GSD+D+
Sbjct: 141 YLGSDVDI 148


>sp|Y828_METBU|UPF0210 protein Mbur_0828|Methanococcoides burtonii (strain DSM 6242

Query: 5 SDIDVF 10
SDIDVF
Sbjct: 37 SDIDVF 42


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 GSDIDV 9
GSDIDV
Sbjct: 1031 GSDIDV 1036


>sp|RL22_CENSY|LARGE ribosomal subunit protein uL22|Cenarchaeum symbiosum (strain A)

Query: 2 YKGSDID 8
YKG D+D
Sbjct: 103 YKGMDLD 109


>sp|CCA_METMA|CCA-ADDING enzyme|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YKGSDIDV 9
YKG D+D+
Sbjct: 119 YKGFDVDL 126


>sp|CPGS_PYRAB|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 AYKGSDID 8
AYKG+D +
Sbjct: 99 AYKGADFE 106


>sp|CSG_METAC|MAJOR S-layer protein|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YKGSDID 8
Y GSDID
Sbjct: 35 YNGSDID 41


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YKGSDIDVF 10
Y GSD D+F
Sbjct: 962 YAGSDGDIF 970


>sp|CCA_PICTO|CCA-ADDING enzyme|Picrophilus torridus (strain ATCC 700027

Query: 3 KGSDIDVF 10
K SD+D+F
Sbjct: 58 KNSDLDIF 65


>sp|RL22_NITMS|LARGE ribosomal subunit protein uL22|Nitrosopumilus maritimus (strain

Query: 2 YKGSDID 8
YKG D+D
Sbjct: 103 YKGMDLD 109


>sp|CCA_PYRIL|CCA-ADDING enzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AYKGSDIDVF 10
AY GS IDV
Sbjct: 189 AYYGSFIDVL 198


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YKGSDIDVF 10
Y GSD D+F
Sbjct: 923 YAGSDGDIF 931


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 YKGSDIDVF 10
++G D+D++
Sbjct: 52 FEGKDVDIY 60


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 AYKGSDIDVF 10
Y GSD D+F
Sbjct: 752 QYAGSDGDIF 761


>sp|DN7_METS5|DNA-BINDING protein 7|Metallosphaera sedula (strain ATCC 51363

Query: 2 YKGSDIDV 9
YKG D++V
Sbjct: 9 YKGQDLEV 16


>sp|DN7_METCR|DNA-BINDING protein 7|Metallosphaera cuprina (strain Ar-4)

Query: 2 YKGSDIDV 9
YKG D++V
Sbjct: 9 YKGQDLEV 16


>sp|YPZ5_METTF|UNCHARACTERIZED protein ORF5'|Methanothermobacter thermautotrophicus

Query: 1 AYKGSDIDV 9
A KG+D+D+
Sbjct: 258 AVKGTDLDL 266


>sp|KTHY_THEVO|PROBABLE thymidylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YKGSDIDVF 10
Y+G D+++F
Sbjct: 44 YEGDDVELF 52




245|Sequence|1221|1230|DIDVFTFGTP

>sp|RASEA_METAC|ARCHAEOSINE synthase subunit beta|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DIDVFTFGTP 10
+I+ FT+GTP
Sbjct: 334 EIEDFTYGTP 343


>sp|LYSY_PYRFU|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 IDVFTFGTP 10
ID FT+G P
Sbjct: 116 IDRFTYGLP 124


>sp|FEN_METMA|FLAP endonuclease 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DIDVFTFGTP 10
D D F FG P
Sbjct: 173 DYDSFLFGAP 182


>sp|FEN_METBF|FLAP endonuclease 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 DIDVFTFGTP 10
D D F FG P
Sbjct: 173 DYDSFLFGAP 182


>sp|FEN_METAC|FLAP endonuclease 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DIDVFTFGTP 10
D D F FG P
Sbjct: 173 DYDSFLFGAP 182


>sp|FEN_CALMQ|FLAP endonuclease 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DIDVFTFGTP 10
D D F FG P
Sbjct: 177 DYDSFLFGAP 186


>sp|IF2A_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 1 DIDVFTFGTP 10
DI ++T G P
Sbjct: 213 DIKIYTIGAP 222


>sp|PUS10_THEPD|TRNA pseudouridine synthase Pus10|Thermofilum pendens (strain DSM 2475

Query: 1 DIDVFTFGT 9
DIDV T GT
Sbjct: 265 DIDVRTLGT 273


>sp|FEN_THESM|FLAP endonuclease 1|Thermococcus sibiricus (strain DSM 12597

Query: 1 DIDVFTFGTP 10
D D FGTP
Sbjct: 173 DYDSLLFGTP 182


>sp|FEN_PYRAB|FLAP endonuclease 1|Pyrococcus abyssi (strain GE5 /

Query: 1 DIDVFTFGTP 10
D D FGTP
Sbjct: 173 DYDSLLFGTP 182


>sp|CCA_SACI7|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DIDVFTF 7
DIDVF F
Sbjct: 53 DIDVFVF 59


>sp|CCA_SACI1|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 DIDVFTF 7
DIDVF F
Sbjct: 53 DIDVFVF 59


>sp|TRM1_METS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanobrevibacter smithii

Query: 2 IDVFTFGTP 10
ID+ FGTP
Sbjct: 130 IDIDPFGTP 138


>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 2 IDVFTFGTP 10
ID+ FGTP
Sbjct: 124 IDIDPFGTP 132


>sp|CCA_SACI6|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DIDVFTF 7
DIDVF F
Sbjct: 53 DIDVFVF 59


>sp|CCA_SACI4|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DIDVFTF 7
DIDVF F
Sbjct: 53 DIDVFVF 59


>sp|CCA_SACI3|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 DIDVFTF 7
DIDVF F
Sbjct: 53 DIDVFVF 59


>sp|CCA_SACI2|CCA-ADDING enzyme|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DIDVFTF 7
DIDVF F
Sbjct: 53 DIDVFVF 59


>sp|CCA_SACS2|CCA-ADDING enzyme|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DIDVFTF 7
DIDVF F
Sbjct: 53 DIDVFVF 59


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei (strain

Query: 2 IDVFTFGTP 10
+DV FGTP
Sbjct: 135 VDVDPFGTP 143


>sp|TRM1_METAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina acetivorans

Query: 2 IDVFTFGTP 10
+DV FGTP
Sbjct: 135 VDVDPFGTP 143


>sp|FEN_METBU|FLAP endonuclease 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 DIDVFTFGTP 10
D D F FG P
Sbjct: 173 DYDSFLFGAP 182


>sp|TRM1_HALMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloarcula marismortui

Query: 2 IDVFTFGTP 10
+DV FGTP
Sbjct: 118 VDVDPFGTP 126


>sp|CCA_SULTO|CCA-ADDING enzyme|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DIDVFTF 7
DID+F F
Sbjct: 54 DIDIFVF 60


>sp|CCA_SACSH|CCA-ADDING enzyme|Saccharolobus shibatae (strain ATCC 51178

Query: 1 DIDVFTF 7
D+DVF F
Sbjct: 53 DVDVFVF 59


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 2 IDVFTFGTP 10
+D+ FGTP
Sbjct: 135 VDIDPFGTP 143


>sp|NQOR_ARCFU|NAD(P)H dehydrogenase (quinone)|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DIDVFTFGTP 10
D D FG+P
Sbjct: 73 DYDAIIFGSP 82


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DIDVFTFGTP 10
D DV GTP
Sbjct: 395 DADVVIMGTP 404


>sp|CCA_SULAC|CCA-ADDING enzyme|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DIDVFTF 7
DID+F F
Sbjct: 54 DIDIFVF 60


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 2 IDVFTFGTP 10
+D+ FGTP
Sbjct: 127 VDIDPFGTP 135


>sp|FEN_METHJ|FLAP endonuclease 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DIDVFTFGTP 10
D D FGTP
Sbjct: 174 DYDTLLFGTP 183


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 2 IDVFTFGTP 10
ID+ FGTP
Sbjct: 121 IDLDPFGTP 129


>sp|PURT_HALWD|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Haloquadratum walsbyi

Query: 1 DIDVFTFGTP 10
D+D+ FG P
Sbjct: 353 DVDIRLFGKP 362


>sp|PUR7_THEKO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DIDVFTFG 8
D DVF FG
Sbjct: 205 DKDVFRFG 212


>sp|LYSJ_PYRAE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 3 DVFTFGTP 10
D+FT G P
Sbjct: 232 DIFTAGKP 239


>sp|Y1154_METTH|UNIVERSAL stress protein MTH_1154|Methanothermobacter thermautotrophicus

Query: 1 DIDVFTFGT 9
D+DV GT
Sbjct: 107 DVDVIVMGT 115


>sp|Y1359_METJA|UPF0273 protein MJ1359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IDVFTFG 8
ID FT+G
Sbjct: 89 IDAFTYG 95


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei (strain

Query: 2 IDVFTFGTP 10
+D+ FGTP
Sbjct: 121 VDIDPFGTP 129


>sp|FLAB3_THEKO|FLAGELLIN B3|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DIDVFTFGTP 10
D DVF G P
Sbjct: 127 DKDVFAVGMP 136


>sp|HEMH_THEVO|FERROCHELATASE volcanium (strain ATCC 51530

Query: 1 DIDVFT 6
D+DVFT
Sbjct: 73 DVDVFT 78




246|Sequence|1226|1235|TFGTPINTIS

>sp|MTTB_METBU|TRIMETHYLAMINE methyltransferase MttB|Methanococcoides burtonii (strain DSM 6242

Query: 2 FGTPINTIS 10
FG PIN IS
Sbjct: 241 FGIPINVIS 249


>sp|RL1_NANEQ|LARGE ribosomal subunit protein uL1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 TFGTPINT 8
TFG PI T
Sbjct: 160 TFGVPIGT 167


>sp|MTTB2_METMA|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FGTPINTIS 10
FG P+N +S
Sbjct: 240 FGMPVNVLS 248


>sp|RL10E_SACS2|LARGE ribosomal subunit protein uL16|Saccharolobus solfataricus (strain

Query: 1 TFGTPINT 8
+FGTPI T
Sbjct: 116 SFGTPIGT 123


>sp|MTTB1_METMA|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FGTPINTIS 10
FG P+N +S
Sbjct: 240 FGMPVNVLS 248


>sp|MTTB_METBA|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri

Query: 2 FGTPINTIS 10
FG P+N +S
Sbjct: 240 FGIPVNVLS 248


>sp|MTTB2_METAC|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina acetivorans (strain ATCC

Query: 2 FGTPINTIS 10
FG P+N +S
Sbjct: 240 FGMPVNVLS 248


>sp|MTTB1_METAC|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina acetivorans (strain ATCC

Query: 2 FGTPINTIS 10
FG P+N +S
Sbjct: 240 FGMPVNVLS 248


>sp|RL10E_SACI7|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 TFGTPINT 8
+FGTPI T
Sbjct: 116 SFGTPIGT 123


>sp|RL10E_SACI6|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 TFGTPINT 8
+FGTPI T
Sbjct: 116 SFGTPIGT 123


>sp|RL10E_SACI4|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 TFGTPINT 8
+FGTPI T
Sbjct: 116 SFGTPIGT 123


>sp|RL10E_SACI3|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 TFGTPINT 8
+FGTPI T
Sbjct: 116 SFGTPIGT 123


>sp|RL10E_SACI2|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 TFGTPINT 8
+FGTPI T
Sbjct: 116 SFGTPIGT 123


>sp|RL10E_SACI1|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 TFGTPINT 8
+FGTPI T
Sbjct: 116 SFGTPIGT 123


>sp|AROC_METKA|CHORISMATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 TFGTPINTI 9
T GTPI+ I
Sbjct: 74 TLGTPISMI 82


>sp|RPO7_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo7|Saccharolobus shibatae (strain ATCC

Query: 2 FGTPINTIS 10
FG P+N I+
Sbjct: 18 FGKPLNEIA 26


>sp|RL10E_METTH|LARGE ribosomal subunit protein uL16|Methanothermobacter

Query: 2 FGTPINTIS 10
FG P++T++
Sbjct: 104 FGKPVSTVA 112


>sp|AATE_THEON|A-TYPE ATP synthase subunit E|Thermococcus onnurineus (strain NA1)

Query: 1 TFGTPINTI 9
T G PI TI
Sbjct: 156 TLGEPITTI 164


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 1 TFGTPI 6
TFGTP+
Sbjct: 503 TFGTPV 508


>sp|RPO7_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo7|Saccharolobus solfataricus (strain

Query: 2 FGTPINTIS 10
FG P+N I+
Sbjct: 18 FGKPLNEIA 26


>sp|NPD_CALMQ|NAD-DEPENDENT protein deacetylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 FGTPINTIS 10
FG P+N I+
Sbjct: 170 FGEPVNEIN 178


>sp|Y2613_METAC|UNCHARACTERIZED serpin-like protein MA_2613/MA_2612|Methanosarcina acetivorans

Query: 4 TPINTIS 10
TPINTI+
Sbjct: 23 TPINTIN 29


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 2 FGTPINTI 9
FGTPI +
Sbjct: 307 FGTPIKDV 314


>sp|RASEA_METAC|ARCHAEOSINE synthase subunit beta|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TFGTPI 6
T+GTPI
Sbjct: 339 TYGTPI 344




247|Sequence|1231|1240|INTISLTTIL

>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 INTISLTTI 9
+N+ISLT I
Sbjct: 249 VNSISLTLI 257




248|Sequence|1236|1245|LTTILLHQAM

>sp|PDXT_CALMQ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Caldivirga maquilingensis

Query: 1 LTTILLHQ 8
LTTIL+H+
Sbjct: 182 LTTILVHE 189


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LTTILLHQA 9
+TTILL QA
Sbjct: 602 VTTILLTQA 610




249|Sequence|1241|1250|LHQAMEMKTW

>sp|Y3521_METJA|UNCHARACTERIZED protein MJECL21|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LHQAMEMKTW 10
LH+A+E+K +
Sbjct: 79 LHEALELKAF 88


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LHQAMEMKT 9
+H+AME +T
Sbjct: 417 IHEAMEQQT 425


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 1 LHQAMEMKT 9
+H+AME +T
Sbjct: 417 IHEAMEQQT 425


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 1 LHQAMEMKT 9
+H+AME +T
Sbjct: 417 IHEAMEQQT 425


>sp|MTAD1_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LHQAMEMKTW 10
LH+ +E K W
Sbjct: 73 LHEWLEKKIW 82


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus

Query: 2 HQAMEMKTW 10
H+A +K+W
Sbjct: 44 HEAAHIKSW 52


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 LHQAMEMKTW 10
L+Q M+ TW
Sbjct: 182 LYQLMQKYTW 191




250|Sequence|1246|1255|EMKTWTIFHG

>sp|MPTE_METJA|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EMKTWTIFH 9
+MK W IF+
Sbjct: 2 DMKEWEIFY 10


>sp|RSAMH_METJA|(R)-S-ADENOSYL-L-METHIONINE hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EMKTWTIFHG 10
E+K + I+HG
Sbjct: 52 EIKPFNIYHG 61


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 5 WTIFHG 10
W +FHG
Sbjct: 98 WPLFHG 103


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MKTWTIFH 9
M+ W I+H
Sbjct: 753 MELWEIYH 760


>sp|Y513_ARCFU|UNCHARACTERIZED protein AF_0513|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EMKTWTIFHG 10
E + W +++G
Sbjct: 74 EYRNWIVYYG 83


>sp|AGLB2_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 MKTWTIF 8
+KTWT F
Sbjct: 396 LKTWTRF 402




251|Sequence|1251|1260|TIFHGVVLLG

>sp|MCH_METPE|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 TIFHGVVLL 9
TI+HG +LL
Sbjct: 229 TIYHGRILL 237


>sp|MCH_METMJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 TIFHGVVLL 9
TI+HG ++L
Sbjct: 229 TIYHGSIML 237


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 HGVVLLG 10
HGVVL+G
Sbjct: 61 HGVVLVG 67


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 4 HGVVLLG 10
HGV+L+G
Sbjct: 61 HGVILVG 67


>sp|IF6_METTH|TRANSLATION initiation factor 6|Methanothermobacter thermautotrophicus (strain

Query: 1 TIFHGVVLLG 10
T+ HGV L+G
Sbjct: 180 TVNHGVTLIG 189


>sp|MBHJ_PYRFU|PROBABLE membrane-bound hydrogenase subunit mbhJ|Pyrococcus furiosus (strain

Query: 2 IFHGVVL 8
I HGVVL
Sbjct: 139 ILHGVVL 145


>sp|Y453_METJA|UNCHARACTERIZED protein MJ0453|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IFHGVVLLG 10
IF G+ L+G
Sbjct: 40 IFEGIFLIG 48




252|Sequence|1256|1265|VVLLGSFLMY

>sp|AROD_IGNH4|3-DEHYDROQUINATE dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 LLGSFLMY 10
LLGSFL Y
Sbjct: 179 LLGSFLNY 186


>sp|TVOK_THEVO|CALCIUM-GATED potassium channel TvoK|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VVLLGSFLMY 10
VVL+GS+L +
Sbjct: 29 VVLIGSYLEF 38


>sp|GATA_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfurisphaera tokodaii (strain DSM

Query: 2 VLLGSFLM 9
+LLGSF++
Sbjct: 345 ILLGSFIL 352


>sp|PRIL_THEKO|DNA primase large subunit PriL|Thermococcus kodakarensis (strain ATCC

Query: 2 VLLGSFLMY 10
VLL SFL Y
Sbjct: 266 VLLTSFLSY 274


>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 2 VLLGSFLMY 10
VLL SFL Y
Sbjct: 250 VLLTSFLSY 258


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VLLGSFLMY 10
VLL SFL Y
Sbjct: 250 VLLTSFLSY 258


>sp|PRIL_PYRAB|DNA primase large subunit PriL|Pyrococcus abyssi (strain GE5 /

Query: 2 VLLGSFLMY 10
VLL SFL Y
Sbjct: 249 VLLTSFLSY 257


>sp|GATA_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 2 VLLGSFLM 9
+LLGSF++
Sbjct: 349 ILLGSFIL 356




253|Sequence|1261|1270|SFLMYFLVSL

>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 LMYFLVSL 10
LMYFL+ L
Sbjct: 305 LMYFLMKL 312


>sp|RS2_METVS|SMALL ribosomal subunit protein uS2|Methanococcus vannielii (strain ATCC

Query: 3 LMYFLVS 9
LMYFL++
Sbjct: 167 LMYFLIA 173




254|Sequence|1266|1275|FLVSLLYNAT

>sp|Y774_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0774|Methanocaldococcus

Query: 1 FLVSLLYN 8
FL+ LLYN
Sbjct: 106 FLIQLLYN 113


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLVSLLYN 8
F+VSLL+N
Sbjct: 100 FMVSLLFN 107


>sp|Y83B_METJA|PROBABLE pilin MJ0835.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLVSLLYNAT 10
F+VS +YN T
Sbjct: 108 FIVSYIYNVT 117




255|Sequence|1271|1280|LYNATCVICN

>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LYNATCVICN 10
L N CVICN
Sbjct: 168 LVNPYCVICN 177


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LYNATCVICN 10
L ++TCV+C+
Sbjct: 490 LTDSTCVVCD 499


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 YNATCVICN 10
YN TC CN
Sbjct: 743 YNYTCPKCN 751


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 YNATCVICN 10
YN TC CN
Sbjct: 746 YNYTCPKCN 754


>sp|DNAJ_HALWD|CHAPERONE protein DnaJ|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LYNATCVICN 10
+Y TC CN
Sbjct: 213 MYTQTCSTCN 222


>sp|CYAS_METHJ|CYSTEATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 YNATCVICN 10
Y TC +CN
Sbjct: 4 YTLTCPVCN 12


>sp|ARAT2_THELN|AROMATIC-AMINO-ACID aminotransferase 2|Thermococcus litoralis (strain ATCC 51850

Query: 1 LYNATCVI 8
+YNATC +
Sbjct: 260 MYNATCPV 267


>sp|AAT_PYRAB|ASPARTATE aminotransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 LYNATCVI 8
+YNATC +
Sbjct: 260 MYNATCPV 267


>sp|SYP_SULTO|PROLINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 NATCVIC 9
NA CV+C
Sbjct: 463 NAKCVMC 469


>sp|DNAJ_HALMA|CHAPERONE protein DnaJ|Haloarcula marismortui (strain ATCC 43049

Query: 1 LYNATCVIC 9
LY+ TC C
Sbjct: 210 LYDETCSTC 218


>sp|RNP4_SACS2|RIBONUCLEASE P protein component 4|Saccharolobus solfataricus (strain ATCC

Query: 5 TCVICN 10
TC+ICN
Sbjct: 82 TCLICN 87


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LYNATCVIC 9
L NA C +C
Sbjct: 168 LVNAKCALC 176


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LYNATCVIC 9
L N CV+C
Sbjct: 168 LVNPKCVLC 176


>sp|PYRH_PICTO|URIDYLATE kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 LYNATC 6
LYN TC
Sbjct: 214 LYNGTC 219


>sp|SYP_SULAC|PROLINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 ATCVIC 9
+TCV+C
Sbjct: 464 STCVVC 469


>sp|RNP4_SACI7|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain Y.G.57.14

Query: 5 TCVICN 10
TC+ICN
Sbjct: 82 TCLICN 87


>sp|RNP4_SACI6|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain M.16.4 /

Query: 5 TCVICN 10
TC+ICN
Sbjct: 82 TCLICN 87


>sp|RNP4_SACI4|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain M.14.25 /

Query: 5 TCVICN 10
TC+ICN
Sbjct: 82 TCLICN 87


>sp|RNP4_SACI2|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 TCVICN 10
TC+ICN
Sbjct: 82 TCLICN 87


>sp|RNP4_SACI1|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain Y.N.15.51

Query: 5 TCVICN 10
TC+ICN
Sbjct: 82 TCLICN 87


>sp|RNP4_SACI3|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain M.16.27)

Query: 5 TCVICN 10
TC+ICN
Sbjct: 82 TCLICN 87


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 LYNATCVIC 9
++ ++CV+C
Sbjct: 61 IFGSSCVLC 69


>sp|SEPS_METMA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YNATCVI 8
Y+A+CVI
Sbjct: 232 YSASCVI 238


>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 YNATCVI 8
Y+A+CVI
Sbjct: 232 YSASCVI 238


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 YNATCVI 8
Y+A+CVI
Sbjct: 232 YSASCVI 238


>sp|SEPS_METAC|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YNATCVI 8
Y+A+CVI
Sbjct: 232 YSASCVI 238


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 ATCVIC 9
TC+IC
Sbjct: 459 GTCIIC 464


>sp|HIS6_META3|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus aeolicus (strain

Query: 1 LYNATCVI 8
LY A CV+
Sbjct: 119 LYGAQCVV 126


>sp|THII_METJA|PROBABLE tRNA sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 NATCVIC 9
N TC+ C
Sbjct: 269 NYTCIFC 275


>sp|TFE_PYRAB|TRANSCRIPTION factor E|Pyrococcus abyssi (strain GE5 /

Query: 2 YNATCVIC 9
Y TC IC
Sbjct: 132 YGFTCPIC 139


>sp|VHCD_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Archaeoglobus profundus (strain

Query: 3 NATCVICN 10
N C+ CN
Sbjct: 8 NIVCIACN 15


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 4 ATCVICN 10
ATC CN
Sbjct: 401 ATCTECN 407


>sp|AMZA_ARCFU|ARCHAEMETZINCIN fulgidus (strain ATCC 49558

Query: 2 YNATCVI 8
YN+TC++
Sbjct: 50 YNSTCIL 56




256|Sequence|1276|1285|CVICNSPTNP

>sp|MFNC_METJA|(5-FORMYLFURAN-3-YL)METHYL phosphate transaminase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VICNSPTNP 10
+I NSP+NP
Sbjct: 158 IIINSPSNP 166


>sp|AAT_METJA|PROBABLE aspartate aminotransferase|Methanocaldococcus jannaschii (strain

Query: 2 VICNSPTNP 10
+I NSP+NP
Sbjct: 158 IIFNSPSNP 166


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 CVICNSP 7
CV+C++P
Sbjct: 495 CVVCDNP 501


>sp|AAT_PYRAB|ASPARTATE aminotransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 VICNSPTNP 10
+I NSP NP
Sbjct: 164 LIINSPCNP 172


>sp|Y773_METJA|UNCHARACTERIZED protein MJ0773|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CVICNSPT 8
CVIC S T
Sbjct: 150 CVICQSDT 157


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 CVICNS 6
CVICN+
Sbjct: 173 CVICNA 178


>sp|ARAT2_THELN|AROMATIC-AMINO-ACID aminotransferase 2|Thermococcus litoralis (strain ATCC 51850

Query: 2 VICNSPTNP 10
+I N+P NP
Sbjct: 164 LIINTPNNP 172


>sp|Y345_METJA|UNCHARACTERIZED protein MJ0345|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VICNSPTNP 10
++ N+PTNP
Sbjct: 87 ILMNTPTNP 95


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 1 CVICNSPT 8
C IC PT
Sbjct: 355 CPICGGPT 362


>sp|CAS8A_METJA|CRISPR-ASSOCIATED protein Cas8a2/Csa4|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CVICNSPTN 9
C++ PTN
Sbjct: 66 CIVVEEPTN 74


>sp|AAT_SULAC|ASPARTATE aminotransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VICNSPTNP 10
V+ N+P NP
Sbjct: 173 VVLNNPHNP 181


>sp|PGK_THEVO|PHOSPHOGLYCERATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 NSPTNP 10
NSP NP
Sbjct: 24 NSPVNP 29


>sp|PGK_PICTO|PHOSPHOGLYCERATE kinase|Picrophilus torridus (strain ATCC 700027

Query: 5 NSPTNP 10
NSP NP
Sbjct: 25 NSPVNP 30


>sp|RKD4_PYRCJ|ARCADIN-4 calidifontis (strain DSM 21063

Query: 1 CVICNSP 7
C IC SP
Sbjct: 427 CPICGSP 433


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 VICNSPTN 9
+IC SPT+
Sbjct: 402 LICKSPTS 409


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VICNSPTN 9
+IC SPT+
Sbjct: 402 LICKSPTS 409


>sp|AAT_THEKO|ASPARTATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VICNSPTNP 10
+I N P NP
Sbjct: 136 IIINYPNNP 144


>sp|EF1A_METJA|ELONGATION factor 1-alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ICNSPTNP 10
+C P NP
Sbjct: 308 VCGHPDNP 315


>sp|RL2_METAR|LARGE ribosomal subunit protein uL2|Methanocella arvoryzae (strain DSM

Query: 1 CVICNSPTNP 10
C ICN + P
Sbjct: 104 CAICNIESQP 113


>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 2 VICNSPTNP 10
VICN T P
Sbjct: 493 VICNFVTKP 501


>sp|AAT_SULTO|ASPARTATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VICNSPTNP 10
++ N+P NP
Sbjct: 172 IVLNNPHNP 180


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 CVICNS 6
CVIC S
Sbjct: 176 CVICGS 181


>sp|NOB1_METJA|ENDORIBONUCLEASE Nob1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CVICNSP 7
C IC SP
Sbjct: 174 CEICGSP 180


>sp|BPS2_ACIAM|PROTEIN bps2|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 CVICNSPTNP 10
C +C S +P
Sbjct: 292 CYVCGSHVDP 301


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 VICNSPTN 9
++C SPT+
Sbjct: 402 LVCKSPTS 409


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VICNSPTN 9
++C SPT+
Sbjct: 402 LVCKSPTS 409


>sp|RL34_HYPBU|LARGE ribosomal subunit protein eL34|Hyperthermus butylicus (strain DSM

Query: 1 CVICNSPTN 9
C IC P N
Sbjct: 37 CAICGRPLN 45


>sp|RL34_STAMF|LARGE ribosomal subunit protein eL34|Staphylothermus marinus (strain

Query: 1 CVICNSPTN 9
C IC P N
Sbjct: 37 CAICGKPLN 45


>sp|SPT4_METJA|TRANSCRIPTION elongation factor Spt4|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CVICNSPTN 9
C IC+SPT+
Sbjct: 16 CPICHSPTS 24


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 3 ICNSP 7
ICNSP
Sbjct: 125 ICNSP 129




257|Sequence|1281|1290|SPTNPYWVME

>sp|GGGPS_KORCO|GERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 TNPYWVME 10
TNPYW+++
Sbjct: 97 TNPYWIIQ 104


>sp|GGGPS_METTH|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 3 TNPYWVM 9
TNPYW++
Sbjct: 99 TNPYWII 105


>sp|GGGPS_METST|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 TNPYWV 8
TNPYW+
Sbjct: 99 TNPYWI 104


>sp|GGGPS_METS3|GERANYLGERANYLGLYCERYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 TNPYWV 8
TNPYW+
Sbjct: 100 TNPYWI 105


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PYWVME 10
PYWV+E
Sbjct: 222 PYWVIE 227


>sp|GGGPS_METTM|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 4 NPYWVM 9
NPYW++
Sbjct: 100 NPYWII 105


>sp|TRUB_PYRAR|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum arsenaticum (strain DSM

Query: 2 PTNPYW 7
PTNP W
Sbjct: 15 PTNPEW 20


>sp|Y1129_METJA|UNCHARACTERIZED protein MJ1129|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PTNPY 6
PTNPY
Sbjct: 46 PTNPY 50


>sp|GGR_METB6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoregula boonei (strain DSM 21154

Query: 2 PTNPYWV 8
P NP W+
Sbjct: 59 PPNPRWI 65


>sp|G3PP_PYRAB|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 2 PTNPYWV 8
P NP WV
Sbjct: 72 PYNPKWV 78


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 TNPYWV 8
TNP WV
Sbjct: 149 TNPTWV 154


>sp|PIWI_ARCFU|PIWI protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TNPYWVM 9
T+P+WVM
Sbjct: 295 THPFWVM 301


>sp|TKTN_METJA|PUTATIVE transketolase N-terminal section|Methanocaldococcus jannaschii

Query: 1 SPTNPY 6
SP NPY
Sbjct: 54 SPDNPY 59


>sp|KORB_METJA|2-OXOGLUTARATE synthase subunit KorB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SPTNPY 6
SPT PY
Sbjct: 133 SPTTPY 138


>sp|KADA_METKA|ADENYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 PTNPYWVME 10
P P WV+E
Sbjct: 99 PGLPIWVLE 107


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 5 PYWVME 10
P W+ME
Sbjct: 354 PVWIME 359


>sp|KADA_METTH|ADENYLATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PTNPYWVME 10
P P WV+E
Sbjct: 96 PGLPVWVLE 104


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 5 PYWVME 10
PYWV++
Sbjct: 222 PYWVIK 227


>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 SPTNPYWVME 10
+PT P W E
Sbjct: 109 TPTMPNWYKE 118


>sp|BGAL_HALLT|BETA-GALACTOSIDASE Bga|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 PYWVME 10
P+WVME
Sbjct: 307 PFWVME 312


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 5 PYWVME 10
P+WVME
Sbjct: 306 PFWVME 311


>sp|G3PP_PYRHO|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PTNPYWV 8
P NP W+
Sbjct: 72 PYNPKWI 78


>sp|TRPC_PYRAR|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 TNPYWVM 9
T PYW +
Sbjct: 77 TEPYWFL 83


>sp|HIS7_PYRCJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 PYWVME 10
PYWV++
Sbjct: 109 PYWVVK 114


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 1 SPTNPYW 7
+PT P W
Sbjct: 264 TPTGPLW 270


>sp|Y289_METJA|UNCHARACTERIZED protein MJ0289|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SPTNPYWVME 10
SP+NP +V+
Sbjct: 129 SPSNPTYVIH 138


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 5 PYWVME 10
PYWV++
Sbjct: 222 PYWVIK 227


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 PYWVME 10
PYWV++
Sbjct: 222 PYWVIK 227


>sp|GGGPS_HYPBU|GERANYLGERANYLGLYCERYL phosphate synthase|Hyperthermus butylicus (strain DSM 5456

Query: 4 NPYWVM 9
+PYW++
Sbjct: 103 DPYWIV 108


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 2 PTNPYWV 8
P NP WV
Sbjct: 874 PNNPAWV 880


>sp|RS4E_PYRNV|SMALL ribosomal subunit protein eS4|Pyrobaculum neutrophilum (strain

Query: 3 TNPYW 7
T+PYW
Sbjct: 8 TSPYW 12




258|Sequence|1286|1295|YWVMEGQLSN

>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 2 WVMEGQLS 9
WV+E QLS
Sbjct: 374 WVLEQQLS 381


>sp|PTH_METVS|PEPTIDYL-TRNA hydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YWVMEGQ 7
YW+ EGQ
Sbjct: 44 YWMNEGQ 50


>sp|BSUHB_METTH|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE thermautotrophicus (strain ATCC 29096

Query: 1 YWVMEGQ 7
YW ++GQ
Sbjct: 144 YWAIKGQ 150


>sp|PELO_IGNH4|PROTEIN pelota homolog|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 WVMEGQL 8
WV EG L
Sbjct: 150 WVFEGSL 156




259|Sequence|1291|1300|GQLSNPTFYL

>sp|Y2362_ARCFU|UNCHARACTERIZED protein AF_2362|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GQLSNPTFYL 10
G + NP FY+
Sbjct: 29 GNIFNPIFYI 38


>sp|RS2_METS3|SMALL ribosomal subunit protein uS2|Methanobrevibacter smithii (strain

Query: 1 GQLSNPTF 8
G L+NPT+
Sbjct: 98 GTLTNPTY 105


>sp|ADEC_METMJ|ADENINE deaminase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GQLSNPTFYL 10
G ++NP YL
Sbjct: 477 GAIANPFMYL 486




260|Sequence|1296|1305|PTFYLVCFLT

>sp|PYRI_PYRAR|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum arsenaticum

Query: 1 PTFYLV 6
PTFYLV
Sbjct: 124 PTFYLV 129


>sp|PYRI_PYRIL|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum islandicum

Query: 1 PTFYLV 6
PTFYLV
Sbjct: 124 PTFYLV 129


>sp|PYRI_PYRCJ|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum calidifontis

Query: 1 PTFYLV 6
PTFYLV
Sbjct: 124 PTFYLV 129


>sp|PYRI_PYRAE|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum aerophilum

Query: 1 PTFYLV 6
PTFYLV
Sbjct: 124 PTFYLV 129


>sp|Y941_METJA|TPR repeat-containing protein MJ0941|Methanocaldococcus jannaschii

Query: 1 PTFYLVCFL 9
P FYL FL
Sbjct: 60 PDFYLALFL 68


>sp|TRPE_AERPE|ANTHRANILATE synthase component 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PTFYLVCF 8
PTF+LV +
Sbjct: 93 PTFFLVSY 100


>sp|Y177_METMA|MACRO domain-containing protein MM_0177|Methanosarcina mazei (strain ATCC

Query: 2 TFYLVCF 8
T YLVC+
Sbjct: 165 TVYLVCY 171


>sp|GATA_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus vannielii (strain ATCC

Query: 1 PTFYLVCFL 9
PT+YL+ ++
Sbjct: 277 PTYYLINYV 285


>sp|GATA_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanothermobacter thermautotrophicus

Query: 1 PTFYLVCFL 9
PT+YL+ ++
Sbjct: 301 PTYYLINYV 309


>sp|GATA_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 1 PTFYLVCFL 9
PT+YL+ ++
Sbjct: 302 PTYYLINYV 310


>sp|GATA_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 1 PTFYLVCFL 9
PT+YL+ ++
Sbjct: 302 PTYYLINYV 310


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 1 PTFYLVCFL 9
PT+YL+ ++
Sbjct: 277 PTYYLINYV 285


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 PTFYLVCFL 9
PT+YL+ ++
Sbjct: 277 PTYYLINYV 285


>sp|GATA_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 PTFYLVCFL 9
PT+YL+ ++
Sbjct: 277 PTYYLINYV 285


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 PTFYLVCFL 9
PT+YL+ ++
Sbjct: 277 PTYYLINYV 285


>sp|GATA_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanocaldococcus jannaschii (strain

Query: 1 PTFYLVCFL 9
PT+YL+ ++
Sbjct: 279 PTYYLINYV 287


>sp|DNLI_SULAC|DNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TFYLVC 7
TFY VC
Sbjct: 478 TFYTVC 483




261|Sequence|1301|1310|VCFLTPVVAL

>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 3 FLTPVVAL 10
FL P+VAL
Sbjct: 261 FLVPLVAL 268




262|Sequence|1306|1315|PVVALLPRYF

>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PVVALLP 7
PV+ALLP
Sbjct: 415 PVIALLP 421


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PVVALLPRY 9
PVVA +PR+
Sbjct: 434 PVVAKVPRH 442


>sp|ARCD_HALSA|ARGININE/ORNITHINE antiporter ArcD|Halobacterium salinarum (strain ATCC 700922

Query: 1 PVVALLPRYF 10
PV++ LP YF
Sbjct: 440 PVLSYLPYYF 449


>sp|ARCD_HALS3|ARGININE/ORNITHINE antiporter ArcD|Halobacterium salinarum (strain ATCC 29341

Query: 1 PVVALLPRYF 10
PV++ LP YF
Sbjct: 440 PVLSYLPYYF 449


>sp|THRC_METAC|THREONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PVVALLP 7
PVV LLP
Sbjct: 145 PVVVLLP 151


>sp|CBIA_METAC|COBYRINATE a,c-diamide synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PVVALLPR 8
PV+ ++PR
Sbjct: 188 PVIGIIPR 195


>sp|Y1126_ARCFU|UNCHARACTERIZED protein AF_1126|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VVALLPR 8
VVA+LPR
Sbjct: 59 VVAILPR 65


>sp|Y277_SULAC|UPF0282 protein Saci_0277|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PVVALLPRYF 10
P V+L PR F
Sbjct: 31 PAVSLAPRRF 40


>sp|TSGBD_HALVD|GLUCOSE ABC transporter permease protein|Haloferax volcanii (strain ATCC

Query: 1 PVVALLPRYF 10
P VALLP F
Sbjct: 113 PAVALLPLMF 122




263|Sequence|1311|1320|LPRYFFLSLQ

>sp|YF1B_METJA|UNCHARACTERIZED protein MJ1516.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RYFFLSL 9
R+FFLSL
Sbjct: 12 RHFFLSL 18


>sp|SYC_METS5|CYSTEINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 RYFFLSLQ 10
RY+FLS Q
Sbjct: 285 RYWFLSSQ 292


>sp|GLNA_PYRWO|GLUTAMINE synthetase|Pyrococcus woesei

Query: 1 LPRYFFL 7
L RYFFL
Sbjct: 433 LERYFFL 439


>sp|GLNA_PYRFU|GLUTAMINE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LPRYFFL 7
L RYFFL
Sbjct: 433 LERYFFL 439




264|Sequence|1316|1325|FLSLQGTCGK

>sp|Y665_METJA|UNCHARACTERIZED protein MJ0665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLSLQGTC 8
F+S +GTC
Sbjct: 151 FISFEGTC 158


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 FLSLQGTCG 9
FL+ +G CG
Sbjct: 35 FLAKEGACG 43


>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LSLQGTCGK 10
L GTCG+
Sbjct: 22 LEYDGTCGQ 30




265|Sequence|1321|1330|GTCGKSLISK

>sp|CDC6Q_HALMA|ORC1-TYPE DNA replication protein 17|Haloarcula marismortui (strain ATCC

Query: 3 CGKSLISK 10
CGKSL++K
Sbjct: 76 CGKSLVAK 83


>sp|Y266_ARCFU|UNCHARACTERIZED transporter AF_0266|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TCGKSLISK 10
T GKSL+SK
Sbjct: 157 TFGKSLLSK 165


>sp|GVPE_HALMT|TRANSCRIPTIONAL activator GvpE|Haloferax mediterranei (strain ATCC 33500

Query: 1 GTCGKSLI 8
G CGK L+
Sbjct: 97 GACGKELL 104


>sp|GVPE2_HALSA|TRANSCRIPTIONAL activator GvpE2|Halobacterium salinarum (strain ATCC 700922

Query: 1 GTCGKSLI 8
G CGK L+
Sbjct: 100 GACGKELL 107


>sp|GVPE1_HALSA|TRANSCRIPTIONAL activator GvpE1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GTCGKSLI 8
G CGK L+
Sbjct: 97 GACGKELL 104


>sp|CDC64_HALSA|ORC1-TYPE DNA replication protein 4|Halobacterium salinarum (strain ATCC

Query: 4 GKSLISK 10
GKSL+SK
Sbjct: 74 GKSLVSK 80


>sp|FDHD_THEVO|SULFUR carrier protein FdhD|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GTCGKSLIS 9
G CGKS I+
Sbjct: 123 GICGKSTIN 131


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 CGKSLISK 10
CGKS++++
Sbjct: 444 CGKSIVAE 451


>sp|CDC62_HALSA|ORC1-TYPE DNA replication protein 2|Halobacterium salinarum (strain ATCC

Query: 4 GKSLISK 10
GKSL+SK
Sbjct: 74 GKSLVSK 80


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 TCGKSLISK 10
TC K ++SK
Sbjct: 543 TCCKDMVSK 551


>sp|DADD_METBU|5'-DEOXYADENOSINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 2 TCGKSLISK 10
TC K +SK
Sbjct: 188 TCSKEFLSK 196


>sp|Y424_METJA|UNCHARACTERIZED protein MJ0424|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CGKSLISK 10
CG S +SK
Sbjct: 89 CGSSCVSK 96


>sp|FDHD_THEAC|SULFUR carrier protein FdhD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GTCGKSLIS 9
G CG+S I+
Sbjct: 127 GICGRSTIA 135




266|Sequence|1326|1335|SLISKAQKID

>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SLISKAQKID 10
S++ KAQ+ID
Sbjct: 526 SILEKAQEID 535




267|Sequence|1331|1340|AQKIDKLPPD

>sp|BRIX_METBF|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina barkeri

Query: 3 KIDKLPP 9
KID+LPP
Sbjct: 119 KIDQLPP 125


>sp|UPPS_SACS2|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Saccharolobus

Query: 3 KIDKLPPD 10
K+DKLP D
Sbjct: 129 KLDKLPKD 136


>sp|IF2B_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter

Query: 2 QKIDKLPPD 10
+ ID+LPP+
Sbjct: 10 RAIDQLPPE 18


>sp|IF2P_META3|PROBABLE translation initiation factor IF-2|Methanococcus aeolicus (strain

Query: 1 AQKIDKLP 8
A KID+LP
Sbjct: 129 ANKIDRLP 136


>sp|LYSJ_SULAC|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfolobus

Query: 2 QKIDKLPPD 10
Q +DK+ PD
Sbjct: 77 QALDKVKPD 85


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 1 AQKIDKLP 8
A KIDK+P
Sbjct: 129 ANKIDKIP 136


>sp|IF2P_SACS2|PROBABLE translation initiation factor IF-2|Saccharolobus solfataricus

Query: 1 AQKIDKLP 8
A KIDK+P
Sbjct: 136 ANKIDKIP 143


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 1 AQKIDKLP 8
A KIDK+P
Sbjct: 137 ANKIDKIP 144


>sp|IF2B_METS3|TRANSLATION initiation factor 2 subunit|Methanobrevibacter smithii (strain

Query: 4 IDKLPPD 10
ID+LPP+
Sbjct: 12 IDQLPPE 18




268|Sequence|1336|1345|KLPPDKRNLE

>sp|WTPC_PYRHO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus horikoshii (strain

Query: 2 LPPDKRNL 9
LPP+KRN
Sbjct: 67 LPPEKRNF 74


>sp|WTPC_PYRAB|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus abyssi (strain GE5 /

Query: 3 PPDKRNL 9
PP+KRNL
Sbjct: 68 PPEKRNL 74


>sp|WTPC_METJA|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Methanocaldococcus jannaschii

Query: 2 LPPDKRNL 9
LPP+KRN+
Sbjct: 66 LPPEKRNV 73


>sp|Y450_METJA|UNCHARACTERIZED protein MJ0450|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLPPDKRNLE 10
KLPPDK +E
Sbjct: 66 KLPPDKVKVE 75


>sp|TRUB_HALMA|PROBABLE tRNA pseudouridine synthase B|Haloarcula marismortui (strain ATCC

Query: 1 KLPPDKRNLE 10
+ PPD+R+L+
Sbjct: 22 RAPPDERDLD 31


>sp|WTPC_THEKO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Thermococcus kodakarensis (strain

Query: 2 LPPDKRNL 9
LPP+KR L
Sbjct: 68 LPPEKRGL 75


>sp|TRUB_PYRAB|PROBABLE tRNA pseudouridine synthase B|Pyrococcus abyssi (strain GE5 /

Query: 2 LPPDKRNLE 10
PPDKR +E
Sbjct: 33 FPPDKRPIE 41


>sp|DLHH_SACS2|PUTATIVE carboxymethylenebutenolidase|Saccharolobus solfataricus (strain

Query: 2 LPPDKRN 8
+PP+KRN
Sbjct: 83 IPPEKRN 89


>sp|WTPC_PYRFU|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus furiosus (strain ATCC

Query: 2 LPPDKRNL 9
LPP+KR +
Sbjct: 67 LPPEKRGI 74


>sp|TRMY_METJA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocaldococcus

Query: 1 KLPPDKRNL 9
K+ PD+RN+
Sbjct: 75 KVSPDERNI 83


>sp|Y579_METJA|UNCHARACTERIZED protein MJ0579|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLPPDKRNLE 10
K+P DKR +E
Sbjct: 232 KIPYDKRIVE 241


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 2 LPPDKRNLE 10
L PD RN+E
Sbjct: 262 LYPDGRNIE 270


>sp|Y1555_ARCFU|UNCHARACTERIZED protein AF_1555|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PPDKRN 8
PPD+RN
Sbjct: 45 PPDQRN 50


>sp|RADA_METS3|DNA repair and recombination protein|Methanobrevibacter smithii (strain

Query: 1 KLPPDKRNLE 10
+LPP+K L+
Sbjct: 122 QLPPEKGGLD 131


>sp|GLFT_PICTO|GLUTAMATE formimidoyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 4 PDKRNLE 10
P++RNLE
Sbjct: 136 PERRNLE 142


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 LPPDKRNL 9
LPP+ RN+
Sbjct: 214 LPPNARNM 221


>sp|MTRA1_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanothermobacter marburgensis

Query: 4 PDKRNL 9
PDKRN+
Sbjct: 100 PDKRNI 105


>sp|MTRA1_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanothermobacter

Query: 4 PDKRNL 9
PDKRN+
Sbjct: 100 PDKRNI 105


>sp|PHP_SACS2|ARYLDIALKYLPHOSPHATASE solfataricus (strain ATCC 35092

Query: 2 LPPDKRN 8
LP DKRN
Sbjct: 230 LPVDKRN 236


>sp|CETZ_PYRFU|TUBULIN-LIKE protein CetZ|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LPPDKRNL 9
+PPD+R L
Sbjct: 42 IPPDRRIL 49


>sp|MTNA_PYRFU|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus furiosus (strain

Query: 3 PPDKRNL 9
PP KRNL
Sbjct: 343 PPFKRNL 349


>sp|MTNA_PYRHO|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus horikoshii

Query: 3 PPDKRNL 9
PP KRNL
Sbjct: 343 PPFKRNL 349


>sp|MTNA_PYRAB|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus abyssi (strain

Query: 3 PPDKRNL 9
PP KRNL
Sbjct: 343 PPFKRNL 349


>sp|TRUB_THEON|PROBABLE tRNA pseudouridine synthase B|Thermococcus onnurineus (strain

Query: 2 LPPDKRNLE 10
PP+KR +E
Sbjct: 33 FPPEKRPME 41




269|Sequence|1341|1350|KRNLEIQSWR

>sp|LIPA_PYRCJ|LIPOYL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KRNLEIQSW 9
KR LE+Q W
Sbjct: 236 KRFLEVQRW 244


>sp|PRNK_THEKO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase TK1956|Thermococcus kodakarensis (strain ATCC

Query: 1 KRNLEIQSWR 10
+RNL + WR
Sbjct: 195 RRNLRAEKWR 204


>sp|Y1633_ARCFU|UNCHARACTERIZED protein AF_1633|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NLEIQSW 9
NLE+Q W
Sbjct: 135 NLEVQKW 141


>sp|AROE_NITMS|SHIKIMATE dehydrogenase (NADP(+))|Nitrosopumilus maritimus (strain SCM1)

Query: 1 KRNLEIQS 8
KRN+EI++
Sbjct: 112 KRNIEIEN 119


>sp|SYH_AERPE|HISTIDINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KRNLEIQSWR 10
+R +EI SWR
Sbjct: 215 ERIMEIISWR 224


>sp|TF2B_SULAC|TRANSCRIPTION initiation factor IIB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KRNLEIQSWR 10
KR LE+ WR
Sbjct: 93 KRRLEVLRWR 102


>sp|TF2B_SULTO|TRANSCRIPTION initiation factor IIB|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KRNLEIQSWR 10
KR LE+ WR
Sbjct: 94 KRRLEVLRWR 103




270|Sequence|1346|1355|IQSWRSRQRP

>sp|Y2328_HALVD|UNCHARACTERIZED isochorismatase family protein HVO_2328|Haloferax volcanii

Query: 1 IQSWRSRQRP 10
+ +WR+ RP
Sbjct: 42 LAAWRAADRP 51




271|Sequence|1351|1360|SRQRPAPVPE

>sp|TRM1_AERPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Aeropyrum pernix (strain

Query: 1 SRQRPAPV 8
SR+RP PV
Sbjct: 137 SRERPTPV 144


>sp|KTHY_METKA|PROBABLE thymidylate kinase|Methanopyrus kandleri (strain AV19 /

Query: 3 QRPAPVPE 10
QRP P P+
Sbjct: 106 QRPVPKPD 113


>sp|SYFA_PYRCJ|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 QRPAPVP 9
Q PAPVP
Sbjct: 211 QYPAPVP 217


>sp|GLCDH_HALMA|GLUCOSE 1-dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 2 RQRPAPVP 9
R+RP+P P
Sbjct: 18 RERPSPDP 25


>sp|PSTK_METKA|L-SERYL-TRNA(SEC) kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 SRQRPAPVPE 10
+R+R P+PE
Sbjct: 117 NRERGEPIPE 126


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RQRPAPVPE 10
R +P P+PE
Sbjct: 356 RWQPPPLPE 364




272|Sequence|1356|1365|APVPEVARPT

>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 4 PEVARP 9
PEVARP
Sbjct: 202 PEVARP 207


>sp|SECY_METVA|PROTEIN translocase subunit SecY|Methanococcus vannielii

Query: 3 VPEVARP 9
+PEV RP
Sbjct: 10 IPEVKRP 16


>sp|KAE1_METKA|TRNA N6-adenosine threonylcarbamoyltransferase|Methanopyrus kandleri

Query: 1 APVPEVARPT 10
APVP ARP+
Sbjct: 330 APVPWAARPS 339


>sp|TRUB_PYRCJ|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum calidifontis (strain DSM

Query: 2 PVPEVARP 9
P+ E+ARP
Sbjct: 230 PIEEIARP 237


>sp|SYS_METAR|SERINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 VPEVARP 9
+PEV RP
Sbjct: 411 IPEVLRP 417


>sp|KPRS_SULAC|RIBOSE-PHOSPHATE pyrophosphokinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PVPEVAR 8
P+P++AR
Sbjct: 144 PIPDIAR 150


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 4 PEVARP 9
PEVARP
Sbjct: 195 PEVARP 200


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 4 PEVARP 9
PEVARP
Sbjct: 195 PEVARP 200


>sp|SYS_METAC|SERINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 VPEVARP 9
+PEV RP
Sbjct: 404 IPEVLRP 410


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VPEVARP 9
+PEV RP
Sbjct: 403 IPEVLRP 409




273|Sequence|1361|1370|VARPTHHPVS

>sp|TYW3_AERPE|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 VARPTHHPVS 10
VA THHP+S
Sbjct: 60 VAYKTHHPIS 69


>sp|Y804_METJA|UNCHARACTERIZED protein MJ0804|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VARPTHHP 8
+ P HHP
Sbjct: 35 IENPQHHP 42


>sp|ENGB_METMA|PROBABLE GTP-binding protein EngB|Methanosarcina mazei (strain ATCC

Query: 3 RPTHHPVS 10
RPTH VS
Sbjct: 49 RPTHAQVS 56


>sp|RIFK_PYRCJ|RIBOFLAVIN kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 THHPV 9
THHPV
Sbjct: 179 THHPV 183


>sp|UDGA_SULTO|TYPE-4 uracil-DNA glycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PTHHPVS 10
PT+HP +
Sbjct: 161 PTYHPAA 167


>sp|UDGA_SACS2|TYPE-4 uracil-DNA glycosylase|Saccharolobus solfataricus (strain ATCC

Query: 4 PTHHPVS 10
PT+HP +
Sbjct: 161 PTYHPAA 167


>sp|DADD_METKA|5'-DEOXYADENOSINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 4 PTHHPVS 10
P H+P+S
Sbjct: 376 PNHNPIS 382


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 3 RPTHHP 8
RP HHP
Sbjct: 337 RPVHHP 342


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 4 PTHHPV 9
P HHPV
Sbjct: 96 PQHHPV 101


>sp|CS1F2_THETK|CRISPR-ASSOCIATED endonuclease Cas1/endonuclease Cas2 fusion|Thermoproteus tenax

Query: 2 ARPTHHPV 9
RPTH PV
Sbjct: 133 GRPTHPPV 140


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 PTHHPVS 10
P H+PVS
Sbjct: 391 PLHNPVS 397




274|Sequence|1366|1375|HHPVSSITGQ

>sp|GATA_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 1 HHPVSSITG 9
H+PVS ITG
Sbjct: 205 HNPVSDITG 213


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 3 PVSSITGQ 10
PVS+ITG+
Sbjct: 198 PVSAITGE 205


>sp|IF2P_METLZ|PROBABLE translation initiation factor IF-2|Methanocorpusculum labreanum

Query: 3 PVSSITGQ 10
PVSS+TG+
Sbjct: 195 PVSSMTGE 202


>sp|IF2P_METTP|PROBABLE translation initiation factor IF-2|Methanothrix thermoacetophila

Query: 3 PVSSITGQ 10
PVS+ITG+
Sbjct: 208 PVSAITGE 215


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 3 PVSSITGQ 10
P+S+ITG+
Sbjct: 196 PISAITGE 203


>sp|IF2P_THEPD|PROBABLE translation initiation factor IF-2|Thermofilum pendens (strain DSM

Query: 3 PVSSITGQ 10
PVS++TG+
Sbjct: 203 PVSAVTGE 210


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 3 PVSSITGQ 10
PVS++TG+
Sbjct: 756 PVSAVTGE 763


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PVSSITG 9
PVS+ITG
Sbjct: 178 PVSTITG 184


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 2 HPVSSITG 9
H VSSITG
Sbjct: 243 HVVSSITG 250


>sp|GFCR_METB6|TRANSCRIPTIONAL regulator GfcR|Methanoregula boonei (strain DSM 21154

Query: 1 HHPVSSITGQ 10
HPV SI+G
Sbjct: 126 EHPVGSISGN 135


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PVSSITG 9
PVS+ITG
Sbjct: 177 PVSTITG 183


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 2 HPVSSITG 9
HP++ +TG
Sbjct: 311 HPIADLTG 318


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PVSSITG 9
PVS+ITG
Sbjct: 195 PVSTITG 201


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 3 PVSSITGQ 10
PVS++TG+
Sbjct: 198 PVSAMTGE 205


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 3 PVSSITGQ 10
PVS++TG+
Sbjct: 198 PVSAMTGE 205


>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 3 PVSSITGQ 10
PVS++TG+
Sbjct: 198 PVSAMTGE 205


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 3 PVSSITGQ 10
PVS++TG+
Sbjct: 198 PVSAMTGE 205


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 2 HPVSSITG 9
HPV +TG
Sbjct: 314 HPVPDLTG 321


>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 HPVSSITG 9
HPV +TG
Sbjct: 314 HPVPDLTG 321


>sp|IF2P_METBU|PROBABLE translation initiation factor IF-2|Methanococcoides burtonii

Query: 3 PVSSITGQ 10
P+S+ITG+
Sbjct: 198 PISAITGE 205


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 HPVSSITG 9
HPV +TG
Sbjct: 319 HPVPDLTG 326


>sp|IF2P_METBF|PROBABLE translation initiation factor IF-2|Methanosarcina barkeri (strain

Query: 3 PVSSITGQ 10
PVS++TG+
Sbjct: 198 PVSAMTGE 205


>sp|IF2P_HALLT|PROBABLE translation initiation factor IF-2|Halorubrum lacusprofundi (strain

Query: 3 PVSSITGQ 10
P+S+ITG+
Sbjct: 201 PLSAITGE 208


>sp|AATB3_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 HPVSSITG 9
HPV +TG
Sbjct: 317 HPVPDLTG 324


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 2 HPVSSITGQ 10
HP + I GQ
Sbjct: 354 HPANRIAGQ 362


>sp|AATB_THESI|A-TYPE ATP synthase subunit B|Thermococcus sp. (strain KI)

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 314 HPIPDLTG 321


>sp|AATB_THEPD|A-TYPE ATP synthase subunit B|Thermofilum pendens (strain DSM 2475

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 314 HPIPDLTG 321


>sp|AATB_THEON|A-TYPE ATP synthase subunit B|Thermococcus onnurineus (strain NA1)

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 316 HPIPDLTG 323


>sp|AATB_THEKO|A-TYPE ATP synthase subunit B|Thermococcus kodakarensis (strain ATCC

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 316 HPIPDLTG 323


>sp|AATB_THEGJ|A-TYPE ATP synthase subunit B|Thermococcus gammatolerans (strain DSM 15229

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 314 HPIPDLTG 321


>sp|AATB_SULTO|A-TYPE ATP synthase subunit B|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 317 HPIPDLTG 324


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 318 HPIPDLTG 325


>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 315 HPIPDLTG 322


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 315 HPIPDLTG 322


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 315 HPIPDLTG 322


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 315 HPIPDLTG 322


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 315 HPIPDLTG 322


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 315 HPIPDLTG 322


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 315 HPIPDLTG 322


>sp|AATB_PYRHO|A-TYPE ATP synthase subunit B|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 316 HPIPDLTG 323


>sp|AATB_PYRFU|A-TYPE ATP synthase subunit B|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 313 HPIPDLTG 320


>sp|AATB_PYRAB|A-TYPE ATP synthase subunit B|Pyrococcus abyssi (strain GE5 /

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 313 HPIPDLTG 320


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 317 HPIPDLTG 324


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 319 HPIPDLTG 326


>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 319 HPIPDLTG 326


>sp|AATB_METS5|A-TYPE ATP synthase subunit B|Metallosphaera sedula (strain ATCC 51363

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 318 HPIPDLTG 325


>sp|AATB_METS3|A-TYPE ATP synthase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 318 HPIPDLTG 325


>sp|AATB_METMP|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain DSM 14266

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 318 HPIPDLTG 325


>sp|AATB_METM7|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C7 /

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 318 HPIPDLTG 325


>sp|AATB_METM6|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C6 /

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 318 HPIPDLTG 325


>sp|AATB_METM5|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C5 /

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 318 HPIPDLTG 325


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 837 HPIPDLTG 844


>sp|AATB_METJA|A-TYPE ATP synthase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 318 HPIPDLTG 325


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 320 HPIPDLTG 327


>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 316 HPIPDLTG 323


>sp|AATB_HALSA|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 700922

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 319 HPIPDLTG 326


>sp|AATB_HALS3|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 29341

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 319 HPIPDLTG 326


>sp|AATB_HALMA|A-TYPE ATP synthase subunit B|Haloarcula marismortui (strain ATCC 43049

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 318 HPIPDLTG 325


>sp|AATB_HALLT|A-TYPE ATP synthase subunit B|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 319 HPIPDLTG 326


>sp|AATB_DESSY|A-TYPE ATP synthase subunit B|Desulfurococcus sp. (strain SY)

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 314 HPIPDLTG 321


>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 317 HPIPDLTG 324


>sp|AATB_ARCFU|A-TYPE ATP synthase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 311 HPIPDLTG 318


>sp|AATB_AERPE|A-TYPE ATP synthase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 316 HPIPDLTG 323


>sp|AATB_IGNH4|A-TYPE ATP synthase subunit B|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 319 HPIPDLTG 326


>sp|AATB_METVS|A-TYPE ATP synthase subunit B|Methanococcus vannielii (strain ATCC 35089

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 318 HPIPDLTG 325


>sp|AATB_METLZ|A-TYPE ATP synthase subunit B|Methanocorpusculum labreanum (strain ATCC

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 311 HPIPDLTG 318


>sp|AATB_STAMF|A-TYPE ATP synthase subunit B|Staphylothermus marinus (strain ATCC 43588

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 319 HPIPDLTG 326


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 318 HPIPDLTG 325


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 311 HPIPDLTG 318


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 316 HPIPDLTG 323


>sp|AATB_METAR|A-TYPE ATP synthase subunit B|Methanocella arvoryzae (strain DSM 22066

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 311 HPIPDLTG 318


>sp|AATB_METB6|A-TYPE ATP synthase subunit B|Methanoregula boonei (strain DSM 21154

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 311 HPIPDLTG 318


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 316 HPIPDLTG 323


>sp|AATB_HYPBU|A-TYPE ATP synthase subunit B|Hyperthermus butylicus (strain DSM 5456

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 321 HPIPDLTG 328


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 316 HPIPDLTG 323


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 316 HPIPDLTG 323


>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 318 HPIPDLTG 325


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HPVSSITG 9
HP+ +TG
Sbjct: 316 HPIPDLTG 323




275|Sequence|1371|1380|SITGQDFSAS

>sp|AGLC_METVO|DOLICHYL N-acetyl-alpha-D-glucosaminyl phosphate

Query: 2 ITGQDF 7
ITGQDF
Sbjct: 187 ITGQDF 192


>sp|MTRA2_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanobrevibacter ruminantium

Query: 2 ITGQDFSA 9
ITGQ F A
Sbjct: 85 ITGQSFKA 92




276|Sequence|1376|1385|DFSASTPKSS

***** No hits found ******


277|Sequence|1381|1390|TPKSSNPPKR

>sp|PDXS_THEKO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus kodakarensis

Query: 3 KSSNPPK 9
KSSNPPK
Sbjct: 283 KSSNPPK 289


>sp|PDXS_THEGJ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus gammatolerans

Query: 3 KSSNPPK 9
KSSNPPK
Sbjct: 283 KSSNPPK 289


>sp|PDXS_PYRHO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus horikoshii (strain

Query: 3 KSSNPPK 9
KSSNPPK
Sbjct: 283 KSSNPPK 289


>sp|PDXS_PYRAB|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus abyssi (strain GE5 /

Query: 3 KSSNPPK 9
KSSNPPK
Sbjct: 283 KSSNPPK 289


>sp|PDXS_ARCFU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Archaeoglobus fulgidus (strain

Query: 3 KSSNPPK 9
KSSNPP+
Sbjct: 282 KSSNPPE 288


>sp|PDXS_PYRFU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus furiosus (strain ATCC

Query: 3 KSSNPP 8
KSSNPP
Sbjct: 283 KSSNPP 288


>sp|LYSK_THEKO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Thermococcus kodakarensis

Query: 1 TPKSSNPPK 9
TP NPPK
Sbjct: 221 TPPGYNPPK 229


>sp|KAD_METAC|ADENYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 SNPPKR 10
SNPPK+
Sbjct: 140 SNPPKK 145


>sp|RSMA_ARCFU|PROBABLE ribosomal RNA small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 PKSSNPPKR 10
P S NPP +
Sbjct: 158 PSSFNPPPK 166




278|Sequence|1386|1395|NPPKRKHVEE

>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PKRKHVEE 10
P+R HVEE
Sbjct: 289 PRRLHVEE 296


>sp|NCPP_CALMQ|PROBABLE inosine/xanthosine triphosphatase|Caldivirga maquilingensis

Query: 1 NPPKRKHVEE 10
NP K K VEE
Sbjct: 9 NPSKVKAVEE 18


>sp|UDGA_SACS2|TYPE-4 uracil-DNA glycosylase|Saccharolobus solfataricus (strain ATCC

Query: 1 NPPKRKHVEE 10
NPP RK +EE
Sbjct: 171 NPPIRKVLEE 180


>sp|TRMY_THEKO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 1 NPPKRKHVE 9
NPPK H E
Sbjct: 61 NPPKTIHFE 69


>sp|HELS_METVS|ATP-DEPENDENT DNA helicase Hel308|Methanococcus vannielii (strain ATCC 35089

Query: 2 PPKRKHVEE 10
PP++K +EE
Sbjct: 18 PPQKKVIEE 26


>sp|CBIG_METJA|PROBABLE cobalt-precorrin-5A hydrolase|Methanocaldococcus jannaschii (strain

Query: 2 PPKRKHV 8
PKRKH+
Sbjct: 134 TPKRKHI 140


>sp|EF2_IGNH4|ELONGATION factor 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PKRKHVEE 10
PK KHVE+
Sbjct: 2 PKYKHVED 9


>sp|MFNA_THEKO|L-ASPARTATE decarboxylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 KRKHVEE 10
KR+H+EE
Sbjct: 366 KREHLEE 372


>sp|AROE_METKA|SHIKIMATE dehydrogenase (NADP(+))|Methanopyrus kandleri (strain AV19 /

Query: 1 NPPKRKHVEE 10
NPP+ + +EE
Sbjct: 236 NPPRTRLLEE 245


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 PPKRKHVEE 10
PP+++ VEE
Sbjct: 207 PPRKRSVEE 215


>sp|RFCL_PYRAB|REPLICATION factor C large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 NPPKRK 6
NPPK+K
Sbjct: 39 NPPKKK 44


>sp|TRPA_METJA|TRYPTOPHAN synthase alpha chain|Methanocaldococcus jannaschii (strain ATCC

Query: 4 KRKHVEE 10
KR+HVEE
Sbjct: 216 KREHVEE 222


>sp|KPRS_SULAC|RIBOSE-PHOSPHATE pyrophosphokinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PPKRKHVEE 10
PP+ KH+ E
Sbjct: 58 PPQDKHLVE 66


>sp|Y818_METJA|UNCHARACTERIZED protein MJ0818|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PKRKHVEE 10
PK KH+ E
Sbjct: 31 PKEKHIAE 38


>sp|RFCL_THEKO|REPLICATION factor C large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 NPPKRKHV 8
NPPK+K +
Sbjct: 39 NPPKKKAL 46


>sp|RIBA_PICTO|GTP cyclohydrolase-2|Picrophilus torridus (strain ATCC 700027

Query: 1 NPPKRKHVEE 10
NP K K++EE
Sbjct: 149 NPEKLKYLEE 158


>sp|RNP2_THEON|RIBONUCLEASE P protein component 2|Thermococcus onnurineus (strain NA1)

Query: 5 RKHVEE 10
RKHVEE
Sbjct: 74 RKHVEE 79




279|Sequence|1391|1400|KHVEESVLHE

>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 1 KHVEESVLHE 10
KH+ E + HE
Sbjct: 475 KHIREQIFHE 484


>sp|PSB2_CENSY|PROTEASOME subunit beta 2|Cenarchaeum symbiosum (strain A)

Query: 2 HVEESVLH 9
+VEE +LH
Sbjct: 4 NVEEKILH 11




280|Sequence|1396|1405|SVLHEQRCGT

>sp|NFI_PICTO|BIFUNCTIONAL methyltransferase/endonuclease|Picrophilus torridus (strain ATCC

Query: 2 VLHEQRCG 9
+LH +RCG
Sbjct: 201 LLHPRRCG 208


>sp|Y1304_METJA|PUTATIVE toxin MJ1304|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SVLHEQRC 8
SV H Q+C
Sbjct: 37 SVYHSQQC 44


>sp|FWDG_METKA|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanopyrus kandleri

Query: 2 VLHEQRC 8
V+HE+RC
Sbjct: 5 VIHEERC 11


>sp|G1PDH_METLZ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocorpusculum labreanum (strain ATCC

Query: 2 VLHEQRCG 9
VLH + CG
Sbjct: 276 VLHGEACG 283


>sp|COFH_METHJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanospirillum hungatei JF-1

Query: 3 LHEQRCG 9
L E+RCG
Sbjct: 47 LREKRCG 53




281|Sequence|1401|1410|QRCGTECMRD

>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 RCGTECM 8
RCGTEC+
Sbjct: 435 RCGTECV 441


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RCGTECM 8
RCGT+C+
Sbjct: 438 RCGTKCV 444


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RCGTECM 8
RCGT C+
Sbjct: 441 RCGTPCI 447


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RCGTECM 8
RCGT C+
Sbjct: 440 RCGTPCV 446


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 RCGTECM 8
RCGT C+
Sbjct: 440 RCGTPCV 446


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RCGTECM 8
RCGT C+
Sbjct: 440 RCGTPCV 446


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RCGTECM 8
RCGT C+
Sbjct: 440 RCGTPCV 446


>sp|Y719_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 QRCGTECMR 9
++C ECM+
Sbjct: 26 KKCSMECMK 34


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 RCGTECMRD 10
RCG+E +R+
Sbjct: 763 RCGSELIRN 771


>sp|CHEB2_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina

Query: 6 ECMRD 10
ECMRD
Sbjct: 138 ECMRD 142


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 RCGTECM 8
RCG +C+
Sbjct: 453 RCGEKCI 459


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 RCGTECM 8
RCG +C+
Sbjct: 456 RCGEKCI 462


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 RCGTECM 8
RCG +C+
Sbjct: 456 RCGEKCI 462


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 RCGTECM 8
RCG +C+
Sbjct: 456 RCGEKCI 462


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 RCGTECM 8
RCG +C+
Sbjct: 465 RCGEKCI 471


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 RCGTE 6
RCGTE
Sbjct: 446 RCGTE 450


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RCGTE 6
RCGTE
Sbjct: 446 RCGTE 450


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 RCGTE 6
RCGTE
Sbjct: 446 RCGTE 450


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RCGTE 6
RCGTE
Sbjct: 446 RCGTE 450


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RCGTE 6
RCGTE
Sbjct: 446 RCGTE 450


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RCGTE 6
RCGTE
Sbjct: 431 RCGTE 435


>sp|IF2G_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter

Query: 1 QRCGTE 6
+RCGTE
Sbjct: 72 ERCGTE 77


>sp|NADA_PYRAE|QUINOLINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 CGTECM 8
CGT C+
Sbjct: 199 CGTACL 204


>sp|MCRA_METVO|METHYL-COENZYME M reductase subunit alpha|Methanococcus voltae

Query: 2 RCGTECMRD 10
RCGT+ D
Sbjct: 364 RCGTKATMD 372


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 2 RCGTE 6
RCGTE
Sbjct: 658 RCGTE 662




282|Sequence|1406|1415|ECMRDDSCSG

>sp|ILVD_METVS|DIHYDROXY-ACID dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ECMRDDSCSG 10
+C+ D +CSG
Sbjct: 178 KCIEDCACSG 187


>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CMRDDSC 8
C+ DD C
Sbjct: 299 CLEDDEC 305


>sp|ILVD_METMP|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ECMRDDSCSG 10
+C+ D +CSG
Sbjct: 178 KCIEDCACSG 187


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 CMRDDSC 8
CMR D C
Sbjct: 380 CMRYDDC 386


>sp|CHEB2_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina

Query: 1 ECMRD 5
ECMRD
Sbjct: 138 ECMRD 142


>sp|GATE_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus vannielii (strain ATCC

Query: 2 CMRDDSC 8
C+ +DSC
Sbjct: 157 CLEEDSC 163




283|Sequence|1411|1420|DSCSGDSSAQ

***** No hits found ******


284|Sequence|1416|1425|DSSAQLSSGE

>sp|CDC63_SULAC|ORC1-TYPE DNA replication protein 3|Sulfolobus acidocaldarius (strain ATCC

Query: 3 SAQLSSGE 10
+AQL+SGE
Sbjct: 257 AAQLASGE 264


>sp|CDC63_SULTO|ORC1-TYPE DNA replication protein 3|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 SAQLSSGE 10
+AQL+SGE
Sbjct: 257 AAQLASGE 264


>sp|CSG2_HALHT|CELL surface glycoprotein 2|Haloarcula hispanica (strain ATCC 33960

Query: 3 SAQLSSG 9
SAQLSSG
Sbjct: 763 SAQLSSG 769




285|Sequence|1421|1430|LSSGEHLLGP

>sp|NADB_HALSA|L-ASPARTATE oxidase|Halobacterium salinarum (strain ATCC 700922

Query: 2 SSGEHLLGP 10
++G H+LGP
Sbjct: 128 ATGHHILGP 136


>sp|REG7_PYRHO|HTH-TYPE transcriptional regulator LrpA|Pyrococcus horikoshii (strain ATCC

Query: 1 LSSGEHLL 8
LSSG+H++
Sbjct: 95 LSSGDHMI 102


>sp|REG7_PYRFU|HTH-TYPE transcriptional regulator LrpA|Pyrococcus furiosus (strain ATCC

Query: 1 LSSGEHLL 8
LSSG+H++
Sbjct: 95 LSSGDHMI 102


>sp|REG7_PYRAB|HTH-TYPE transcriptional regulator LrpA|Pyrococcus abyssi (strain GE5 /

Query: 1 LSSGEHLL 8
LSSG+H++
Sbjct: 95 LSSGDHMI 102


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 1 LSSGEHL 7
LSSG+HL
Sbjct: 384 LSSGDHL 390


>sp|LRPA1_HALS3|HTH-TYPE transcriptional regulator LrpA1|Halobacterium salinarum (strain

Query: 2 SSGEHLL 8
SSG+H+L
Sbjct: 97 SSGDHML 103


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 LSSGEHLLGP 10
L GE LGP
Sbjct: 894 LEEGEERLGP 903


>sp|COMC_METFV|L-SULFOLACTATE dehydrogenase|Methanothermus fervidus (strain ATCC 43054

Query: 1 LSSGEHLLG 9
L +G HLLG
Sbjct: 78 LINGNHLLG 86


>sp|CARA_METS5|CARBAMOYL phosphate synthase small chain|Metallosphaera sedula (strain ATCC

Query: 1 LSSGEHLLGP 10
++SGEH+ P
Sbjct: 144 IASGEHVEDP 153




286|Sequence|1426|1435|HLLGPNRIMA

>sp|DPO4_METS5|DNA polymerase IV|Metallosphaera sedula (strain ATCC 51363

Query: 3 LGPNRIMA 10
+GPN+++A
Sbjct: 144 IGPNKVVA 151


>sp|THSG_SACS2|CHAPERONIN subunit gamma|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HLLGPNRIMA 10
+L+G N IMA
Sbjct: 297 YLMGKNGIMA 306




287|Sequence|1431|1440|NRIMAYSRGQ

>sp|HISX_METKA|HISTIDINOL dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 RIMAYSRG 9
+++AYSRG
Sbjct: 220 KLLAYSRG 227


>sp|TRUA_THESM|TRNA pseudouridine synthase A|Thermococcus sibiricus (strain DSM 12597

Query: 1 NRIMAYSRGQ 10
NRI +SRG+
Sbjct: 154 NRIDVFSRGR 163




288|Sequence|1436|1445|YSRGQTDMCR

>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 YSRGQTD 7
YSRG+TD
Sbjct: 227 YSRGETD 233


>sp|COFD_METHJ|2-PHOSPHO-L-LACTATE transferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 RGQTDMC 9
RG TD+C
Sbjct: 156 RGNTDIC 162


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 YSRGQTD 7
Y+RG+TD
Sbjct: 233 YARGETD 239


>sp|HISX_METKA|HISTIDINOL dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 YSRGQTDM 8
YSRG TD+
Sbjct: 224 YSRGLTDV 231


>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YSRGQTD 7
Y RG+TD
Sbjct: 233 YERGETD 239


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 QTDMC 9
QTDMC
Sbjct: 354 QTDMC 358


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 YSRGQTD 7
Y RG+TD
Sbjct: 230 YKRGETD 236


>sp|HIS6_METB6|IMIDAZOLE glycerol phosphate synthase subunit|Methanoregula boonei (strain

Query: 1 YSRGQTDMC 9
++RG+ D C
Sbjct: 231 FTRGKADAC 239


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 YSRGQTD 7
Y RG+TD
Sbjct: 227 YGRGETD 233


>sp|SPSS_METTH|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 SRGQTDMCR 10
+RG D+CR
Sbjct: 171 ARGVADVCR 179


>sp|COFH_METHJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanospirillum hungatei JF-1 (strain

Query: 2 SRGQTDMC 9
SRG T++C
Sbjct: 105 SRGVTEIC 112




289|Sequence|1441|1450|TDMCRCSKRS

>sp|OGT_SULTO|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DMCRCSKRS 10
D C C++RS
Sbjct: 27 DFCDCAERS 35


>sp|CAS4_SACS2|CRISPR-ASSOCIATED exonuclease Cas4|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TDMCRCSKR 9
TD+ RC +R
Sbjct: 27 TDLVRCPRR 35


>sp|Y1401_SACS2|PUTATIVE CRISPR-associated protein SSO1401|Saccharolobus solfataricus

Query: 1 TDMCRCSKR 9
+DMC+ SK+
Sbjct: 167 SDMCKPSKK 175


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 4 CRCSKRS 10
C+CSK++
Sbjct: 206 CKCSKKA 212


>sp|OGT_METS5|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 DMCRCSKRS 10
D C+C++ S
Sbjct: 27 DFCKCAEES 35


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 2 DMCRCSK 8
D+C CSK
Sbjct: 547 DICICSK 553


>sp|OGT_SULAC|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DMCRCSKRS 10
D C C++R+
Sbjct: 27 DFCDCAERN 35


>sp|SPSS_METTP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 DMCRCSKRS 10
D RC KRS
Sbjct: 10 DKFRCMKRS 18




290|Sequence|1446|1455|CSKRSSHRRS

>sp|GYRA_HALWD|DNA gyrase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 2 SKRSSHRRS 10
S RS+HR+S
Sbjct: 69 SARSAHRKS 77




291|Sequence|1451|1461|SHRRSQSSLTI

***** No hits found ******




THE END