AT10A_HUMAN Blast Output
Archaea
1|Sequence|1|10|MEREPAGTEE

>sp|WTPA_METJA|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MEREPAGT 8
+EREPAG+
Sbjct: 68 VEREPAGS 75


>sp|COXX1_NATPD|PROTOHEME IX farnesyltransferase 1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 MEREPAGTEE 10
++ EPA TE+
Sbjct: 153 VDEEPAATEQ 162


>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain ATCC

Query: 2 EREPAGTEE 10
+R+P GTEE
Sbjct: 3 QRQPPGTEE 11


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 EREPAGTEE 10
+ +PAGT+E
Sbjct: 179 QMDPAGTQE 187




2|Sequence|6|15|AGTEEPGPPG

>sp|RRP42_SACI1|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.N.15.51

Query: 3 TEEPGPP 9
T EPGPP
Sbjct: 97 TFEPGPP 103


>sp|RRP42_SACS2|EXOSOME complex component Rrp42|Saccharolobus solfataricus (strain ATCC

Query: 3 TEEPGPP 9
T EPGPP
Sbjct: 97 TFEPGPP 103


>sp|RRP42_SACI7|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.G.57.14

Query: 3 TEEPGPP 9
T EPGPP
Sbjct: 97 TFEPGPP 103


>sp|RRP42_SACI6|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.4 /

Query: 3 TEEPGPP 9
T EPGPP
Sbjct: 97 TFEPGPP 103


>sp|RRP42_SACI4|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.14.25 /

Query: 3 TEEPGPP 9
T EPGPP
Sbjct: 97 TFEPGPP 103


>sp|RRP42_SACI3|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.27)

Query: 3 TEEPGPP 9
T EPGPP
Sbjct: 97 TFEPGPP 103


>sp|RRP42_SACI2|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 TEEPGPP 9
T EPGPP
Sbjct: 97 TFEPGPP 103


>sp|RRP42_SULTO|EXOSOME complex component Rrp42|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 TEEPGPP 9
T EPGPP
Sbjct: 97 TFEPGPP 103


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EPGPPG 10
EPGP G
Sbjct: 789 EPGPSG 794


>sp|RRP42_ARCFU|EXOSOME complex component Rrp42|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TEEPGPP 9
T EPGPP
Sbjct: 92 TFEPGPP 98


>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 3 TEEPGPP 9
T PGPP
Sbjct: 9 TVSPGPP 15


>sp|RRP42_METTH|EXOSOME complex component Rrp42|Methanothermobacter thermautotrophicus

Query: 3 TEEPGPP 9
T EPGPP
Sbjct: 94 TFEPGPP 100


>sp|TRPB_HALSA|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 700922

Query: 1 AGTEEPGP 8
AGT EP P
Sbjct: 263 AGTHEPAP 270


>sp|TRPB_HALS3|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 29341

Query: 1 AGTEEPGP 8
AGT EP P
Sbjct: 263 AGTHEPAP 270




3|Sequence|11|20|PGPPGRRRRR

>sp|G3P_HALVA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula vallismortis (Halobacterium vallismortis)

Query: 2 GPPGRRRRR 10
GP G+ RRR
Sbjct: 194 GPNGKPRRR 202


>sp|GUOP_HALLT|GUANOSINE phosphorylase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PGPPGRRRR 9
PG PGR R
Sbjct: 21 PGDPGRVDR 29


>sp|SURE_NATPD|5'-NUCLEOTIDASE SurE|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PGPPGRRRR 9
P PPG RR
Sbjct: 217 PDPPGTDRR 225


>sp|CAPPA_METTH|PHOSPHOENOLPYRUVATE carboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 PGRRRRR 10
PGRR+R+
Sbjct: 348 PGRRKRK 354




4|Sequence|16|25|RRRRREGRTR

>sp|RL18_METS3|LARGE ribosomal subunit protein uL18|Methanobrevibacter smithii (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_META3|LARGE ribosomal subunit protein uL18|Methanococcus aeolicus (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 1 RRRRREGR 8
R RRREG+
Sbjct: 556 RARRREGK 563


>sp|RL18_SULAC|LARGE ribosomal subunit protein uL18|Sulfolobus acidocaldarius (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_SACI7|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_SACI6|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_SACI4|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_SACI3|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_SACI2|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_SACI1|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_METPE|LARGE ribosomal subunit protein uL18|Methanosphaerula palustris (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_SULTO|LARGE ribosomal subunit protein uL18|Sulfurisphaera tokodaii (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_METB6|LARGE ribosomal subunit protein uL18|Methanoregula boonei (strain DSM

Query: 2 RRRREGRT 9
RRRREGRT
Sbjct: 12 RRRREGRT 19


>sp|RL18_STAMF|LARGE ribosomal subunit protein uL18|Staphylothermus marinus (strain

Query: 1 RRRRREGRT 9
+RRRREG+T
Sbjct: 11 KRRRREGKT 19


>sp|RL18_METBU|LARGE ribosomal subunit protein uL18|Methanococcoides burtonii (strain

Query: 2 RRRREGRT 9
RRRREGRT
Sbjct: 12 RRRREGRT 19


>sp|RL18_METLZ|LARGE ribosomal subunit protein uL18|Methanocorpusculum labreanum

Query: 2 RRRREGRT 9
RRRREGRT
Sbjct: 12 RRRREGRT 19


>sp|RL18_METMP|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_METHJ|LARGE ribosomal subunit protein uL18|Methanospirillum hungatei JF-1

Query: 2 RRRREGRT 9
RRRREGRT
Sbjct: 12 RRRREGRT 19


>sp|RL18_METBF|LARGE ribosomal subunit protein uL18|Methanosarcina barkeri (strain

Query: 2 RRRREGRT 9
RRRREGRT
Sbjct: 12 RRRREGRT 19


>sp|RL18_METAC|LARGE ribosomal subunit protein uL18|Methanosarcina acetivorans (strain

Query: 2 RRRREGRT 9
RRRREGRT
Sbjct: 12 RRRREGRT 19


>sp|RL18_METMA|LARGE ribosomal subunit protein uL18|Methanosarcina mazei (strain ATCC

Query: 2 RRRREGRT 9
RRRREGRT
Sbjct: 12 RRRREGRT 19


>sp|RL18_SACS2|LARGE ribosomal subunit protein uL18|Saccharolobus solfataricus (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 15 RRRREGKT 22


>sp|RL18_METVA|LARGE ribosomal subunit protein uL18|Methanococcus vannielii

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 14 RRRREGKT 21


>sp|RL18_METM5|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_METVS|LARGE ribosomal subunit protein uL18|Methanococcus vannielii (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_METST|LARGE ribosomal subunit protein uL18|Methanosphaera stadtmanae (strain

Query: 2 RRRREGRT 9
+RRREG+T
Sbjct: 12 KRRREGKT 19


>sp|RL18_METAR|LARGE ribosomal subunit protein uL18|Methanocella arvoryzae (strain DSM

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_METM7|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_METM6|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_KORCO|LARGE ribosomal subunit protein uL18|Korarchaeum cryptofilum (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_ARCFU|LARGE ribosomal subunit protein uL18|Archaeoglobus fulgidus (strain

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 14 RRRREGKT 21


>sp|RL18_METTH|LARGE ribosomal subunit protein uL18|Methanothermobacter

Query: 2 RRRREGRT 9
RRRREG+T
Sbjct: 12 RRRREGKT 19


>sp|RL18_METMJ|LARGE ribosomal subunit protein uL18|Methanoculleus marisnigri (strain

Query: 2 RRRREGRT 9
RRR EG+T
Sbjct: 12 RRRHEGKT 19


>sp|APGM_PYRIL|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RRRRREGR 8
R+RR EGR
Sbjct: 212 RKRRLEGR 219


>sp|APGM_PYRHO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RRRREGR 8
RRR+EG+
Sbjct: 211 RRRKEGK 217




5|Sequence|21|30|EGRTRTVRSN

>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GRTRTVRSN 10
G+T T++SN
Sbjct: 662 GKTFTIKSN 670




6|Sequence|26|35|TVRSNLLPPP

>sp|FAEHP_METAR|BIFUNCTIONAL enzyme Fae/Hps|Methanocella arvoryzae (strain DSM 22066

Query: 2 VRSNLLPPP 10
VR NL+P P
Sbjct: 51 VRPNLIPKP 59


>sp|ILVC_CALMQ|KETOL-ACID reductoisomerase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 2 VRSNLLPPP 10
+R NL+ PP
Sbjct: 111 IRYNLIKPP 119


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TVRSNLLPP 9
TV++N +PP
Sbjct: 292 TVKTNEMPP 300


>sp|RS5_SACI1|SMALL ribosomal subunit protein uS5|Saccharolobus islandicus (strain

Query: 1 TVRSNLLPPP 10
+V NLLP P
Sbjct: 144 SVEVNLLPAP 153




7|Sequence|31|40|LLPPPGAEDP

>sp|MTD_METST|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaera

Query: 3 PPPGAEDP 10
P PGA+ P
Sbjct: 68 PDPGAKSP 75


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 5 PGAEDP 10
PG+EDP
Sbjct: 24 PGSEDP 29


>sp|BGAL_SACS2|BETA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 5 PGAEDP 10
PG+EDP
Sbjct: 24 PGSEDP 29


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LPPPGAEDP 10
+PPPG P
Sbjct: 408 VPPPGKPSP 416


>sp|SYH_NANEQ|HISTIDINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LLPPPGAED 9
+LPP G +D
Sbjct: 2 ILPPRGTKD 10


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 2 LPPPGAEDP 10
+P PG+ DP
Sbjct: 386 VPLPGSADP 394


>sp|RS3_METHJ|SMALL ribosomal subunit protein uS3|Methanospirillum hungatei JF-1

Query: 2 LPPPGAEDP 10
L PPGA+ P
Sbjct: 182 LIPPGAQLP 190


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 5 PGAEDP 10
PG+EDP
Sbjct: 24 PGSEDP 29


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 1 LLPPPGAE 8
L+PP GAE
Sbjct: 502 LVPPEGAE 509


>sp|THYX_HALMA|FLAVIN-DEPENDENT thymidylate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LLPPPGAEDP 10
++ PP A DP
Sbjct: 118 VVTPPSATDP 127


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LLPPPGA 7
++PPPGA
Sbjct: 405 VVPPPGA 411


>sp|PUR2_METST|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LLPPPGAED 9
L+P P A+D
Sbjct: 207 LIPMPAAQD 215




8|Sequence|36|45|GAEDPAAGAA

>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AEDPAA 7
AEDPAA
Sbjct: 811 AEDPAA 816




9|Sequence|41|50|AAGAAKGERR

>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AAGAAKGER 9
A G+AKG+R
Sbjct: 297 ATGSAKGDR 305


>sp|ENO_SACS2|ENOLASE solfataricus (strain ATCC 35092

Query: 2 AGAAKGER 9
AGA+KG R
Sbjct: 42 AGASKGTR 49


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AAGAAKGER 9
A G+A+G+R
Sbjct: 296 ATGSARGDR 304


>sp|ENO_SULTO|ENOLASE tokodaii (strain DSM 16993

Query: 2 AGAAKGER 9
AGA+KG R
Sbjct: 42 AGASKGSR 49


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 AAGAAKGER 9
A G+A+G+R
Sbjct: 296 ATGSARGDR 304


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AAGAAKGER 9
A G+A+G+R
Sbjct: 298 ATGSARGDR 306


>sp|ENO_SACI1|ENOLASE islandicus (strain Y.N.15.51 /

Query: 2 AGAAKGER 9
AGA+KG R
Sbjct: 42 AGASKGTR 49


>sp|ENO_SACI7|ENOLASE islandicus (strain Y.G.57.14 /

Query: 2 AGAAKGER 9
AGA+KG R
Sbjct: 42 AGASKGTR 49




10|Sequence|46|55|KGERRRRRGC

>sp|RS6E_HYPBU|SMALL ribosomal subunit protein eS6|Hyperthermus butylicus (strain DSM

Query: 1 KGERRRR 7
KGERRR+
Sbjct: 187 KGERRRK 193


>sp|KAD6_PYRHO|PUTATIVE adenylate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GERRRRRG 9
GER R RG
Sbjct: 94 GERLRERG 101


>sp|KAD6_PYRAB|PUTATIVE adenylate kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 GERRRRRG 9
GER R RG
Sbjct: 94 GERLRERG 101


>sp|RS6E_STAMF|SMALL ribosomal subunit protein eS6|Staphylothermus marinus (strain ATCC

Query: 1 KGERRRR 7
KGERRR+
Sbjct: 189 KGERRRK 195


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 3 ERRRRRGC 10
E RRR GC
Sbjct: 842 EYRRRLGC 849


>sp|PURP_KORCO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 KGERRRRR 8
+G+RRR+R
Sbjct: 124 EGDRRRQR 131




11|Sequence|51|60|RRRGCAQHLA

>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 RGCAQHL 9
+GC QHL
Sbjct: 158 QGCGQHL 164


>sp|UVRC_HALSA|UVRABC system protein C|Halobacterium salinarum (strain ATCC 700922

Query: 3 RGCAQH 8
RGC++H
Sbjct: 156 RGCSEH 161


>sp|UVRC_HALS3|UVRABC system protein C|Halobacterium salinarum (strain ATCC 29341

Query: 3 RGCAQH 8
RGC++H
Sbjct: 156 RGCSEH 161




12|Sequence|56|65|AQHLADNRLK

>sp|CFBC_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 1 AQHLADNRLK 10
A HL+D RL+
Sbjct: 252 ASHLSDERLR 261


>sp|TKSP_THEKO|SUBTILISIN-LIKE serine protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 ADNRLK 10
ADNRLK
Sbjct: 342 ADNRLK 347


>sp|Y699_METJA|UNCHARACTERIZED protein MJ0699|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HLADNRLK 10
H+ADN +K
Sbjct: 60 HIADNSIK 67


>sp|PGK_THEKO|PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QHLADNRLK 10
QHL DN K
Sbjct: 43 QHLLDNGAK 51




13|Sequence|61|70|DNRLKTTKYT

>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DNRLKTTKYT 10
+++LK T+YT
Sbjct: 252 EDKLKGTEYT 261


>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DNRLKTTKY 9
DN LKT Y
Sbjct: 457 DNNLKTVAY 465


>sp|PYRB_CALMQ|ASPARTATE carbamoyltransferase catalytic subunit|Caldivirga maquilingensis

Query: 1 DNRLKTTKY 9
D+RL +T+Y
Sbjct: 273 DHRLDSTRY 281




14|Sequence|66|75|TTKYTLLSFL

>sp|GATB_SULTO|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfurisphaera tokodaii (strain DSM

Query: 1 TTKYTLLSF 9
T+KYTLL +
Sbjct: 139 TSKYTLLDY 147


>sp|GATB_SACS2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 1 TTKYTLLSF 9
T+KYTLL +
Sbjct: 138 TSKYTLLDY 146


>sp|CDPAS_SACS2|CDP-ARCHAEOL synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TTKYTLLSFL 10
T ++TL+SFL
Sbjct: 74 TAEWTLISFL 83


>sp|CDPAS_SACI7|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 TTKYTLLSFL 10
T ++TL+SFL
Sbjct: 74 TAEWTLISFL 83


>sp|CDPAS_SACI6|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 TTKYTLLSFL 10
T ++TL+SFL
Sbjct: 74 TAEWTLISFL 83


>sp|CDPAS_SACI4|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 TTKYTLLSFL 10
T ++TL+SFL
Sbjct: 74 TAEWTLISFL 83


>sp|CDPAS_SACI3|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 TTKYTLLSFL 10
T ++TL+SFL
Sbjct: 74 TAEWTLISFL 83


>sp|CDPAS_SACI2|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 TTKYTLLSFL 10
T ++TL+SFL
Sbjct: 74 TAEWTLISFL 83




15|Sequence|71|80|LLSFLPKNLF

>sp|PDXS_SULTO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Sulfurisphaera tokodaii

Query: 1 LLSFLPKNL 9
LLSFLP+ L
Sbjct: 10 LLSFLPQKL 18


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LSFLPKNL 9
LSF+PKN+
Sbjct: 252 LSFIPKNV 259


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 1 LLSFLPKN 8
LLS+LP+N
Sbjct: 243 LLSYLPQN 250


>sp|TRUD_METAC|PROBABLE tRNA pseudouridine synthase D|Methanosarcina acetivorans (strain

Query: 2 LSFLPKNLF 10
S LPKNL+
Sbjct: 261 FSVLPKNLY 269


>sp|PIMT_METM6|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C6 /

Query: 4 FLPKNL 9
FLPKN+
Sbjct: 36 FLPKNM 41


>sp|Y1676_METJA|UNCHARACTERIZED protein MJ1676|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLSFLPKNL 9
+ SF+P+NL
Sbjct: 54 ITSFVPENL 62


>sp|PCNA_THEPD|DNA polymerase sliding clamp|Thermofilum pendens (strain DSM 2475

Query: 4 FLPKNLF 10
F+P NLF
Sbjct: 51 FIPSNLF 57




16|Sequence|76|85|PKNLFEQFHR

>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PKNLFEQF 8
P+NLF++F
Sbjct: 698 PQNLFQEF 705


>sp|PCNA_THEPD|DNA polymerase sliding clamp|Thermofilum pendens (strain DSM 2475

Query: 1 PKNLFEQF 8
P NLFE++
Sbjct: 53 PSNLFEEY 60


>sp|DNLI_METKA|DNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 PKNLFEQFHR 10
PK E FHR
Sbjct: 385 PKEAAEMFHR 394


>sp|PCNA_METMP|DNA polymerase sliding clamp|Methanococcus maripaludis (strain DSM

Query: 1 PKNLFEQF 8
PK++FE++
Sbjct: 52 PKDVFEEY 59


>sp|PCNA_METM7|DNA polymerase sliding clamp|Methanococcus maripaludis (strain C7 /

Query: 1 PKNLFEQF 8
PK++FE++
Sbjct: 52 PKDVFEEY 59


>sp|PCNA_METM5|DNA polymerase sliding clamp|Methanococcus maripaludis (strain C5 /

Query: 1 PKNLFEQF 8
PK++FE++
Sbjct: 52 PKDVFEEY 59


>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 NLFEQFHR 10
NLF++F R
Sbjct: 313 NLFDEFER 320


>sp|DPHB_PYRFU|DIPHTHINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PKNLFEQF 8
PK + EQF
Sbjct: 257 PKEILEQF 264


>sp|PCNA_THEAC|DNA polymerase sliding clamp|Thermoplasma acidophilum (strain ATCC

Query: 1 PKNLFEQFH 9
PK F +FH
Sbjct: 52 PKEAFVEFH 60


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PKNLFEQFHR 10
PK L E +H+
Sbjct: 71 PKELVEVYHK 80


>sp|PURO_METVS|IMP cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PKNLFEQF 8
PKNL E F
Sbjct: 45 PKNLEEMF 52


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PKNLFEQFHR 10
PK L E +H+
Sbjct: 75 PKELVEIYHK 84


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 PKNLFEQFH 9
P+N+ ++FH
Sbjct: 494 PENIRQEFH 502


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 PKNLFEQFH 9
P+N+ ++FH
Sbjct: 494 PENIRQEFH 502


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PKNLFEQFH 9
P+NL +FH
Sbjct: 491 PENLRHEFH 499




17|Sequence|81|90|EQFHRPANVY

>sp|XACK_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacK|Haloferax volcanii (strain ATCC

Query: 3 FHRPANVY 10
+HRP N++
Sbjct: 228 YHRPNNLF 235


>sp|MRE11_PYRFU|DNA double-strand break repair protein|Pyrococcus furiosus (strain

Query: 1 EQFHRP 6
EQFH+P
Sbjct: 14 EQFHKP 19


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 3 FHRPANV 9
FH PAN+
Sbjct: 562 FHGPANI 568


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EQFHRPANVY 10
EQF + +N+Y
Sbjct: 20 EQFWKESNIY 29


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 FHRPANVY 10
HR ANVY
Sbjct: 323 LHRIANVY 330


>sp|SYN_PYRFU|ASPARAGINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EQFHRPANVY 10
E+F RP VY
Sbjct: 314 EEFDRPFFVY 323


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EQFHRPANVY 10
EQ RP N Y
Sbjct: 1125 EQITRPINEY 1134


>sp|SYN_PYRHO|ASPARAGINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EQFHRPANVY 10
E+F RP VY
Sbjct: 314 EEFDRPFFVY 323


>sp|TRM1_METMP|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 EQFHRPANV 9
E FH ANV
Sbjct: 108 EVFHEDANV 116


>sp|TRM1_METMI|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 EQFHRPANV 9
E FH ANV
Sbjct: 108 EVFHEDANV 116


>sp|UVRC_HALWD|UVRABC system protein C|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EQFHRPANV 9
E+F R AN+
Sbjct: 215 EEFERAANI 223


>sp|TRM1_METM6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 EQFHRPANV 9
E FH ANV
Sbjct: 108 EVFHEDANV 116


>sp|TRM1_METM5|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 EQFHRPANV 9
E FH ANV
Sbjct: 108 EVFHEDANV 116


>sp|TRM1_METM7|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 EQFHRPANV 9
E FH ANV
Sbjct: 108 EVFHEDANV 116


>sp|DNAG_THEGJ|DNA primase DnaG|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EQFHRPANVY 10
E FH+ N Y
Sbjct: 301 EMFHKGKNFY 310




18|Sequence|86|95|PANVYFVFIA

>sp|CSG_METJA|S-LAYER protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PANVYFVFIA 10
PAN Y +F+A
Sbjct: 117 PANAYALFVA 126


>sp|EF1A_META3|ELONGATION factor 1-alpha|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PANVYFVFIA 10
PAN++FV +A
Sbjct: 180 PANIHFVPVA 189


>sp|Y075_METJA|UNCHARACTERIZED ATP-binding protein MJ0075|Methanocaldococcus jannaschii (strain

Query: 1 PANVYFVF 8
P N+YF++
Sbjct: 23 PDNIYFIY 30


>sp|Y1428_METJA|TPR repeat-containing protein MJ1428|Methanocaldococcus jannaschii

Query: 1 PANVYFVFI 9
P+N+YF ++
Sbjct: 79 PSNIYFAYL 87


>sp|AMTAB_PYRHO|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 1 PANVYFVF 8
P NVYF+
Sbjct: 135 PRNVYFIL 142


>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 1 PANVYFVF 8
P N+YF++
Sbjct: 21 PNNIYFIY 28


>sp|RNH2_PYRNV|RIBONUCLEASE HII|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PANVYFV 7
PA+VY+V
Sbjct: 97 PADVYYV 103


>sp|Y1609_METJA|UNCHARACTERIZED ATP-binding protein MJ1609|Methanocaldococcus jannaschii (strain

Query: 1 PANVYFVF 8
P N+YF++
Sbjct: 21 PNNIYFIY 28


>sp|TRPB2_PYRFU|TRYPTOPHAN synthase beta chain 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PANVYFVF 8
PA +YF F
Sbjct: 93 PARIYFKF 100


>sp|TRPB1_SULTO|TRYPTOPHAN synthase beta chain 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PANVYFVF 8
PA +YF F
Sbjct: 90 PAKIYFKF 97


>sp|PURP_ARCFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Archaeoglobus fulgidus (strain ATCC

Query: 2 ANVYFVF 8
AN+YF F
Sbjct: 203 ANIYFSF 209




19|Sequence|91|100|FVFIALLNFV

>sp|Y4223_METAC|UPF0228 protein MA_4223|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VFIALLNFV 10
VFIALL F+
Sbjct: 10 VFIALLTFL 18


>sp|Y393_METMA|UPF0228 protein MM_0393|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VFIALLNFV 10
VFIALL F+
Sbjct: 10 VFIALLTFL 18


>sp|HTPX_THEGJ|PROTEASE HtpX homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FVFIALLNFV 10
F+F L NF+
Sbjct: 37 FLFAMLFNFI 46




20|Sequence|96|105|LLNFVPAVNA

>sp|HEM3_METAR|PROBABLE porphobilinogen deaminase|Methanocella arvoryzae (strain DSM 22066

Query: 3 NFVPAVN 9
NFVPA N
Sbjct: 183 NFVPAAN 189


>sp|COBD_PYRFU|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus furiosus (strain

Query: 1 LLNFVPA 7
LLNFVPA
Sbjct: 193 LLNFVPA 199


>sp|ENGB_METMP|PROBABLE GTP-binding protein EngB|Methanococcus maripaludis (strain DSM

Query: 1 LLNFVPAV 8
L NFVPA+
Sbjct: 197 LDNFVPAI 204


>sp|COBD_AERPE|PROBABLE cobalamin biosynthesis protein CobD|Aeropyrum pernix (strain ATCC

Query: 1 LLNFVPA 7
LLNF+PA
Sbjct: 213 LLNFIPA 219


>sp|COBD_PYRAB|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus abyssi (strain GE5 /

Query: 1 LLNFVPA 7
+LNF+PA
Sbjct: 194 ILNFIPA 200




21|Sequence|101|110|PAVNAFQPGL

>sp|SPT5_THEKO|TRANSCRIPTION elongation factor Spt5|Thermococcus kodakarensis (strain ATCC

Query: 1 PAVNAFQPG 9
PAV+ F+PG
Sbjct: 88 PAVSGFEPG 96


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 NAFQPGL 10
NAFQP L
Sbjct: 384 NAFQPAL 390


>sp|Y130_ARCFU|PROBABLE deacetylase AF_0130|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PAVNAFQP 8
P VN F+P
Sbjct: 232 PVVNEFKP 239


>sp|SPT5_PYRFU|TRANSCRIPTION elongation factor Spt5|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PAVNAFQPG 9
PAV+ +PG
Sbjct: 87 PAVSGLEPG 95




22|Sequence|106|115|FQPGLALAPV

>sp|Y1629_METJA|UPF0282 protein MJ1629|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PGLALAP 9
PG+ALAP
Sbjct: 31 PGVALAP 37


>sp|Y504_ARCFU|UPF0282 protein AF_0504|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PGLALAP 9
PG++LAP
Sbjct: 31 PGVSLAP 37


>sp|Y1587_METJA|UNCHARACTERIZED protein MJ1587|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QPGLALAP 9
Q GLA+AP
Sbjct: 107 QGGLAIAP 114


>sp|Y763_ARCFU|UNCHARACTERIZED protein AF_0763|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FQPGLAL 7
F+PGLA+
Sbjct: 77 FRPGLAI 83


>sp|Y055_KORCO|UPF0173 metal-dependent hydrolase Kcr_0055|Korarchaeum cryptofilum (strain

Query: 1 FQPGLALAPV 10
++P LAL P+
Sbjct: 148 YKPDLALLPI 157




23|Sequence|111|120|ALAPVLFILA

***** No hits found ******


24|Sequence|116|125|LFILAITAFR

>sp|HTPX_HALSA|PROTEASE HtpX homolog|Halobacterium salinarum (strain ATCC 700922

Query: 1 LFILAITAFR 10
LF+LAI+ +R
Sbjct: 187 LFVLAISRYR 196


>sp|PYRB_IGNH4|ASPARTATE carbamoyltransferase catalytic subunit|Ignicoccus hospitalis

Query: 2 FILAITAFR 10
F+LA+T F+
Sbjct: 169 FLLALTKFK 177


>sp|PYRB_HYPBU|ASPARTATE carbamoyltransferase catalytic subunit|Hyperthermus butylicus

Query: 2 FILAITAFR 10
FILA+T +R
Sbjct: 177 FILALTIYR 185


>sp|Y1595_METJA|UPF0104 membrane protein MJ1595|Methanocaldococcus jannaschii (strain

Query: 1 LFILAITAF 9
LFILAI A+
Sbjct: 18 LFILAIMAY 26




25|Sequence|121|130|ITAFRDLWED

>sp|AGLB2_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TAFRDLW 8
T+F+DLW
Sbjct: 352 TSFKDLW 358


>sp|IDI2_THEVO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ITAFRDLWED 10
++AF + W+D
Sbjct: 18 VSAFHNYWDD 27


>sp|AHBD_METBF|ADOMET-DEPENDENT heme synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 FRDLWED 10
FR++WE+
Sbjct: 289 FREIWEN 295


>sp|GSA_METPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 TAFRDLWE 9
TAF++ W+
Sbjct: 372 TAFKEFWD 379


>sp|Y870_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 ITAFRDLW 8
I + RDLW
Sbjct: 337 IISIRDLW 344


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 ITAFRDLW 8
+T RD+W
Sbjct: 882 VTGLRDVW 889


>sp|NFI_THEPD|ENDONUCLEASE V|Thermofilum pendens (strain DSM 2475

Query: 1 ITAFRDLW 8
+ AFR++W
Sbjct: 83 LLAFREVW 90


>sp|FKBPL_METTH|LONG-TYPE peptidyl-prolyl cis-trans isomerase|Methanothermobacter

Query: 5 RDLWED 10
RD+WE+
Sbjct: 212 RDIWEN 217


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 1 ITAFRDLW 8
++AF +LW
Sbjct: 466 VSAFAELW 473




26|Sequence|126|135|DLWEDYSRHR

>sp|SRP54_THEVO|SIGNAL recognition particle 54 kDa|Thermoplasma volcanium (strain ATCC

Query: 1 DLWEDYSR 8
D+WE +SR
Sbjct: 330 DVWEKFSR 337


>sp|PYRC_THEKO|DIHYDROOROTASE kodakarensis (strain ATCC BAA-918

Query: 2 LWEDYSR 8
LWE++SR
Sbjct: 263 LWENFSR 269


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 WEDYSRHR 10
WED+ +HR
Sbjct: 720 WEDFEQHR 727


>sp|IDH_HALVD|ISOCITRATE dehydrogenase [NADP]|Haloferax volcanii (strain ATCC 29605

Query: 1 DLWEDYSRHR 10
+LWE+Y R
Sbjct: 260 ELWEEYDGER 269


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 DLWEDY 6
DLW+DY
Sbjct: 264 DLWKDY 269


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LWEDYSR 8
LW +YSR
Sbjct: 356 LWTNYSR 362


>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 4 EDYSRHR 10
EDY RHR
Sbjct: 318 EDYLRHR 324


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LWEDYSRHR 10
+W+DY R R
Sbjct: 64 MWDDYDRFR 72


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 LWEDYSRHR 10
+W+DY R R
Sbjct: 64 MWDDYDRFR 72


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LWEDYSRHR 10
+W+DY R R
Sbjct: 64 MWDDYDRFR 72


>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LWEDYSRHR 10
+W+DY R R
Sbjct: 64 MWDDYDRFR 72


>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 4 EDYSRH 9
E+YSRH
Sbjct: 305 ENYSRH 310


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LWEDYSRHR 10
L+EDYS ++
Sbjct: 96 LYEDYSTYK 104


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 1 DLWEDYSRHR 10
+LW+ HR
Sbjct: 238 ELWDKIKEHR 247


>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 4 EDYSRH 9
E+YSRH
Sbjct: 308 ENYSRH 313


>sp|DPCKG_AERPE|GTP-DEPENDENT dephospho-CoA kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LWEDYSRH 9
L E+Y RH
Sbjct: 113 LMEEYGRH 120


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 EDYSRH 9
E+YSRH
Sbjct: 327 ENYSRH 332


>sp|TRUA_THEGJ|TRNA pseudouridine synthase A|Thermococcus gammatolerans (strain DSM

Query: 1 DLWEDYSR 8
DL+E YSR
Sbjct: 245 DLFERYSR 252


>sp|UVRB_METAC|UVRABC system protein B|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 EDYSRH 9
E+YSRH
Sbjct: 327 ENYSRH 332


>sp|CDC61_HALSA|ORC1-TYPE DNA replication protein 1|Halobacterium salinarum (strain ATCC

Query: 3 WEDYSR 8
WED+SR
Sbjct: 79 WEDHSR 84




27|Sequence|131|140|YSRHRSDHKI

>sp|RS4E_THEVO|SMALL ribosomal subunit protein eS4|Thermoplasma volcanium (strain ATCC

Query: 3 RHRSDHKI 10
RH++DH +
Sbjct: 31 RHKADHSV 38


>sp|Y614_METJA|UNCHARACTERIZED protein MJ0614|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YSRHRSDHKI 10
Y RHR H +
Sbjct: 74 YGRHRVGHVV 83


>sp|DTDA_SULTO|D-AMINOACYL-TRNA deacylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YSRHRSDHKI 10
+SRH S KI
Sbjct: 45 FSRHESSSKI 54


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 YSRHRSDHKI 10
Y+RHR + +I
Sbjct: 306 YARHRPNKEI 315


>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YSRHRSDHKI 10
Y+RHR + +I
Sbjct: 306 YARHRPNKEI 315




28|Sequence|136|145|SDHKINHLGC

>sp|COFH_ARCFU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 DHKINHL 8
+H+INHL
Sbjct: 208 EHRINHL 214


>sp|GSA_SACI7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 HKINHLG 9
H INH+G
Sbjct: 346 HTINHIG 352


>sp|GSA_SACI6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 HKINHLG 9
H INH+G
Sbjct: 346 HTINHIG 352


>sp|GSA_SACI4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 HKINHLG 9
H INH+G
Sbjct: 346 HTINHIG 352


>sp|GSA_SACI3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.27)

Query: 3 HKINHLG 9
H INH+G
Sbjct: 346 HTINHIG 352


>sp|GSA_SACI2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 HKINHLG 9
H INH+G
Sbjct: 346 HTINHIG 352


>sp|GSA_SACI1|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 HKINHLG 9
H INH+G
Sbjct: 346 HTINHIG 352


>sp|GSA_SACS2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SDHKINHLG 9
+ H INH+G
Sbjct: 336 TKHTINHVG 344


>sp|PDAD_METMP|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SDHKINHLGC 10
S+H + ++GC
Sbjct: 145 SEHTVENIGC 154


>sp|PDAD_METM7|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus maripaludis (strain C7 /

Query: 1 SDHKINHLGC 10
S+H + ++GC
Sbjct: 145 SEHTVENIGC 154


>sp|PDAD_METM6|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus maripaludis (strain C6 /

Query: 1 SDHKINHLGC 10
S+H + ++GC
Sbjct: 145 SEHTVENIGC 154


>sp|PDAD_METM5|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus maripaludis (strain C5 /

Query: 1 SDHKINHLGC 10
S+H + ++GC
Sbjct: 145 SEHTVENIGC 154


>sp|RL30_THEKO|LARGE ribosomal subunit protein uL30|Thermococcus kodakarensis (strain

Query: 3 HKINHL 8
H+INHL
Sbjct: 29 HRINHL 34


>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 HKINHL 8
H+INHL
Sbjct: 396 HEINHL 401


>sp|RL15E_METKA|LARGE ribosomal subunit protein eL15|Methanopyrus kandleri (strain AV19 /

Query: 1 SDHKIN 6
SDH+IN
Sbjct: 145 SDHRIN 150


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 3 HKINHL 8
H INHL
Sbjct: 417 HNINHL 422


>sp|RL30_METJA|LARGE ribosomal subunit protein uL30|Methanocaldococcus jannaschii

Query: 3 HKINH 7
HK+NH
Sbjct: 28 HKVNH 32


>sp|RL30_META3|LARGE ribosomal subunit protein uL30|Methanococcus aeolicus (strain

Query: 3 HKINH 7
HK+NH
Sbjct: 28 HKVNH 32


>sp|RL30_METBU|LARGE ribosomal subunit protein uL30|Methanococcoides burtonii (strain

Query: 3 HKINH 7
HK+NH
Sbjct: 27 HKVNH 31


>sp|HUTI_THEVO|IMIDAZOLONEPROPIONASE volcanium (strain ATCC 51530

Query: 3 HKINHLGC 10
++IN++GC
Sbjct: 236 NEINNIGC 243


>sp|RL30_METMA|LARGE ribosomal subunit protein uL30|Methanosarcina mazei (strain ATCC

Query: 3 HKINH 7
HK+NH
Sbjct: 27 HKVNH 31


>sp|NIFH2_METTH|NITROGENASE iron protein 2|Methanothermobacter thermautotrophicus (strain

Query: 1 SDHKINHLGC 10
S+H++ +GC
Sbjct: 27 SEHRVLVIGC 36


>sp|RL30_METBF|LARGE ribosomal subunit protein uL30|Methanosarcina barkeri (strain

Query: 3 HKINH 7
HK+NH
Sbjct: 27 HKVNH 31




29|Sequence|141|150|NHLGCLVFSR

>sp|FLUC2_METHJ|FLUORIDE-SPECIFIC ion channel FluC 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 GCLVFSR 10
GC+VFSR
Sbjct: 46 GCVVFSR 52


>sp|GCH3_PYRAE|GTP cyclohydrolase III|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HLGCLVF 8
+LGCL F
Sbjct: 151 NLGCLAF 157


>sp|AGLS_HALVD|DOLICHOL phosphate-mannose mannosyltransferase|Haloferax volcanii (strain

Query: 2 HLGCLVFS 9
H+G +VFS
Sbjct: 49 HIGWMVFS 56




30|Sequence|146|155|LVFSREEKKY

>sp|ASSY_METST|ARGININOSUCCINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LVFSREEKKY 10
L+FSREE K+
Sbjct: 285 LIFSREEIKF 294


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 1 LVFSREEKKY 10
+V+SREE Y
Sbjct: 317 VVYSREEGLY 326


>sp|RTCA_PYRHO|RNA 3'-terminal phosphate cyclase|Pyrococcus horikoshii (strain ATCC

Query: 1 LVFSREEKKY 10
+VF+RE+ K+
Sbjct: 106 MVFAREKVKF 115


>sp|PRNK_METJA|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase MJ1315|Methanocaldococcus jannaschii (strain

Query: 3 FSREEKK 9
FSREE+K
Sbjct: 196 FSREERK 202


>sp|CAS1B_METRM|CRISPR-ASSOCIATED protein Cas1 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 LVFSREEKKY 10
L SREEK Y
Sbjct: 120 LAKSREEKDY 129




31|Sequence|151|160|EEKKYVNRFW

>sp|Y1110_METJA|UNCHARACTERIZED protein MJ1110|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEKKYVNRFW 10
EEKKY+NR+
Sbjct: 263 EEKKYLNRYL 272


>sp|Y1266_METJA|UNCHARACTERIZED protein MJ1266|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEKKYVNRF 9
EEKKYV RF
Sbjct: 149 EEKKYVFRF 157


>sp|NIKR_THEGJ|PUTATIVE nickel-responsive regulator|Thermococcus gammatolerans (strain

Query: 1 EEKKYVNR 8
EEK YVNR
Sbjct: 23 EEKGYVNR 30


>sp|RL1_CENSY|LARGE ribosomal subunit protein uL1|Cenarchaeum symbiosum (strain A)

Query: 1 EEKKYVNRF 9
E +K++NR+
Sbjct: 93 ESRKFINRY 101


>sp|NIKR_THEON|PUTATIVE nickel-responsive regulator|Thermococcus onnurineus (strain NA1)

Query: 1 EEKKYVNR 8
EEK YVNR
Sbjct: 23 EEKGYVNR 30


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 EEKKYVNRF 9
+E KY+ RF
Sbjct: 164 DEAKYITRF 172


>sp|COBD_THEAC|PROBABLE cobalamin biosynthesis protein CobD|Thermoplasma acidophilum

Query: 3 KKYVNRF 9
+KYV+RF
Sbjct: 228 RKYVSRF 234


>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 KKYVNRFW 10
K+Y++ FW
Sbjct: 246 KRYISYFW 253


>sp|NIKR_THESM|PUTATIVE nickel-responsive regulator|Thermococcus sibiricus (strain DSM

Query: 1 EEKKYVNR 8
EEK Y NR
Sbjct: 23 EEKGYANR 30


>sp|HIS4_PYRFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Pyrococcus furiosus (strain ATCC

Query: 3 KKYVNRF 9
+K+VNRF
Sbjct: 154 RKFVNRF 160


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EEKKYVNRFW 10
EEKK V R W
Sbjct: 32 EEKKVVRREW 41


>sp|ASSY_PICTO|ARGININOSUCCINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 3 KKYVNRFW 10
K Y++ FW
Sbjct: 293 KNYIDNFW 300


>sp|Y1610_METJA|UNCHARACTERIZED glycosyl hydrolase MJ1610|Methanocaldococcus jannaschii (strain

Query: 2 EKKYVNRFW 10
++K+V R+W
Sbjct: 373 DRKFVERYW 381


>sp|DAPAT_METMP|LL-DIAMINOPIMELATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EEKKYVNRFW 10
E KK+VNR +
Sbjct: 69 EAKKHVNRGY 78


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 KKYVNRF 9
KKY++RF
Sbjct: 280 KKYLDRF 286


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 KKYVNRF 9
KKY++RF
Sbjct: 280 KKYLDRF 286


>sp|SYT_METMA|THREONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KKYVNRF 9
KKY++RF
Sbjct: 279 KKYLDRF 285


>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 KKYVNRF 9
KKY++RF
Sbjct: 280 KKYLDRF 286


>sp|HIS4_THEKO|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Thermococcus kodakarensis (strain

Query: 3 KKYVNRF 9
+ YVNRF
Sbjct: 152 RNYVNRF 158


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 3 KKYVNRFW 10
+KYV+RF
Sbjct: 316 RKYVSRFL 323


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 KKYVNRF 9
KKY++RF
Sbjct: 281 KKYLDRF 287


>sp|SYT_THEON|THREONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 KKYVNRF 9
+KY+NRF
Sbjct: 273 EKYLNRF 279


>sp|SYT_PYRFU|THREONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KKYVNRF 9
+KY+NRF
Sbjct: 271 EKYLNRF 277




32|Sequence|156|165|VNRFWKEIHV

>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 2 NRFWKEIH 9
N FW+EIH
Sbjct: 418 NGFWREIH 425


>sp|Y1631_ARCFU|UNCHARACTERIZED protein AF_1631|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VNRFWKEI 8
VNRF+KE+
Sbjct: 40 VNRFYKEL 47


>sp|HIS4_THEON|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Thermococcus onnurineus (strain

Query: 1 VNRFWKE 7
+ RFWK+
Sbjct: 175 IERFWKD 181


>sp|THIL_METHJ|THIAMINE-MONOPHOSPHATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 NRFWKEI 8
+RFWK++
Sbjct: 162 SRFWKDL 168


>sp|Y326_METJA|PUTATIVE permease MJ0326|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WKEIH 9
WKE+H
Sbjct: 413 WKEVH 417


>sp|FLAB3_NATMM|FLAGELLIN B3|Natrialba magadii (strain ATCC 43099

Query: 2 NRFWKEI 8
N FW EI
Sbjct: 192 NNFWDEI 198


>sp|R15PI_THEKO|RIBOSE 1,5-bisphosphate isomerase|Thermococcus kodakarensis (strain ATCC

Query: 1 VNRFWKEI 8
V+ FWKE+
Sbjct: 45 VDEFWKEM 52


>sp|SYW_SULAC|TRYPTOPHAN--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 WKEIHV 10
WK IHV
Sbjct: 376 WKRIHV 381


>sp|EPPA_METJA|PREPILIN peptidase EppA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RFWKEI 8
R+WK+I
Sbjct: 121 RYWKDI 126


>sp|PRIS_THEKO|DNA primase small subunit PriS|Thermococcus kodakarensis (strain ATCC

Query: 5 WKEIH 9
WKE+H
Sbjct: 340 WKELH 344


>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 1 VNRFWKEI 8
+ FWKE+
Sbjct: 235 LREFWKEL 242


>sp|NADM2_SULAC|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VNRFWKEIHV 10
VNR +KE +V
Sbjct: 106 VNRLFKEANV 115




33|Sequence|161|170|KEIHVGDFVR

>sp|GATD_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus horikoshii (strain ATCC

Query: 1 KEIHVGDFVR 10
K I++GDF+R
Sbjct: 10 KNINIGDFIR 19


>sp|GATD_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus abyssi (strain GE5 /

Query: 1 KEIHVGDFVR 10
+ I+VGDFVR
Sbjct: 10 RNINVGDFVR 19


>sp|Y119_METJA|UNCHARACTERIZED protein MJ0119|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KEIHVGDFVR 10
KE+ VGD++R
Sbjct: 114 KELKVGDYIR 123


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IHVGDFVR 10
+H+GD++R
Sbjct: 468 VHIGDYIR 475


>sp|LEUD_SULAC|3-ISOPROPYLMALATE dehydratase small subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 KEIHVGDFVR 10
KEI+ GD VR
Sbjct: 110 KEINQGDLVR 119


>sp|GATD_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KEIHVGDFVR 10
K I VGD+VR
Sbjct: 10 KGIEVGDYVR 19


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 3 IHVGDFVR 10
+H+GD++R
Sbjct: 468 VHLGDYIR 475


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IHVGDFVR 10
+H+GD++R
Sbjct: 473 VHIGDYLR 480


>sp|ILVC_ARCFU|KETOL-ACID reductoisomerase (NAD(P)(+))|Archaeoglobus fulgidus (strain ATCC

Query: 1 KEIHVGDFVR 10
KEI G+F R
Sbjct: 281 KEIQTGEFAR 290


>sp|RL2_PICTO|LARGE ribosomal subunit protein uL2|Picrophilus torridus (strain ATCC

Query: 1 KEIHVGD 7
+EIHVGD
Sbjct: 74 QEIHVGD 80


>sp|COXX2_PICTO|PROTOHEME IX farnesyltransferase 2|Picrophilus torridus (strain ATCC 700027

Query: 1 KEIHVG 6
KEIHVG
Sbjct: 228 KEIHVG 233


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IHVGDFVR 10
+H+GD++R
Sbjct: 471 VHLGDYLR 478


>sp|Y35K_HALSI|UNCHARACTERIZED 36 kDa protein|Halobacterium salinarum (Halobacterium halobium)

Query: 3 IHVGDFVR 10
IH+G FVR
Sbjct: 154 IHLGVFVR 161


>sp|RS4E_META3|SMALL ribosomal subunit protein eS4|Methanococcus aeolicus (strain ATCC

Query: 4 HVGDFVR 10
HVGDF +
Sbjct: 195 HVGDFAK 201


>sp|P936_METJA|PHOSPHODIESTERASE MJ0936|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IHVGDFVR 10
IH GDFV
Sbjct: 32 IHCGDFVS 39


>sp|Y200_METJA|UNCHARACTERIZED hydrogenase expression/formation protein

Query: 1 KEIHVGDFV 9
KE+ +GD++
Sbjct: 39 KEVKIGDYI 47


>sp|RS4E_METJA|SMALL ribosomal subunit protein eS4|Methanocaldococcus jannaschii (strain

Query: 4 HVGDFVR 10
HVGDF +
Sbjct: 195 HVGDFAK 201


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 3 IHVGDFVR 10
+ VGDFVR
Sbjct: 162 VLVGDFVR 169


>sp|Y1252_METJA|UNCHARACTERIZED protein MJ1252|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KEIHVGDFV 9
KEI GDFV
Sbjct: 51 KEIKDGDFV 59


>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 2 EIHVGDFV 9
EIHVG F
Sbjct: 107 EIHVGTFT 114


>sp|HEM1_HALWD|GLUTAMYL-TRNA reductase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 KEIHVGDFVR 10
K IHVG+ R
Sbjct: 138 KAIHVGERAR 147


>sp|LEUD1_ARCFU|3-ISOPROPYLMALATE dehydratase small subunit 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 KEIHVGDFV 9
KE+ GDFV
Sbjct: 44 KEVKKGDFV 52


>sp|DCD_HALWD|DCTP deaminase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 IHVGDFV 9
+H GDFV
Sbjct: 78 LHPGDFV 84


>sp|COBQ_HALMA|PROBABLE cobyric acid synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 EIHVGD 7
EIH+GD
Sbjct: 403 EIHMGD 408


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 HVGDFVR 10
HVGD V+
Sbjct: 353 HVGDMVK 359


>sp|THIC1_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina barkeri (strain Fusaro /

Query: 4 HVGDFVR 10
HVGD V+
Sbjct: 353 HVGDMVK 359


>sp|HEM1_HALMA|GLUTAMYL-TRNA reductase|Haloarcula marismortui (strain ATCC 43049

Query: 1 KEIHVGDFVR 10
K IHVG+ R
Sbjct: 140 KAIHVGERAR 149


>sp|RPO7_METJA|DNA-DIRECTED RNA polymerase subunit Rpo7|Methanocaldococcus jannaschii (strain

Query: 1 KEIHVGDFVR 10
K + +GD+VR
Sbjct: 134 KVLEIGDYVR 143


>sp|PGMI_THEAC|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma acidophilum

Query: 3 IHVGDFV 9
IH GD+V
Sbjct: 278 IHFGDYV 284


>sp|LEUD_METS5|3-ISOPROPYLMALATE dehydratase small subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 KEIHVGDFVR 10
KEI+ GD V+
Sbjct: 110 KEINEGDVVK 119


>sp|Y1507_METJA|UNCHARACTERIZED ABC transporter permease MJ1507|Methanocaldococcus jannaschii

Query: 1 KEIHVGDFVR 10
+EI VGD ++
Sbjct: 165 REIKVGDVIK 174


>sp|DCD_NATPD|DCTP deaminase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 IHVGDFV 9
+H GDFV
Sbjct: 78 LHPGDFV 84


>sp|DCD_HALLT|DCTP deaminase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 IHVGDFV 9
+H GDFV
Sbjct: 78 LHPGDFV 84


>sp|COFD_METM7|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain C7 /

Query: 1 KEIHVGDFV 9
K IH DFV
Sbjct: 185 KAIHESDFV 193


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 4 HVGDFVR 10
HVGD V+
Sbjct: 353 HVGDMVK 359


>sp|DCD_HALMA|DCTP deaminase|Haloarcula marismortui (strain ATCC 43049

Query: 3 IHVGDFV 9
+H GDFV
Sbjct: 78 LHPGDFV 84




34|Sequence|166|175|GDFVRLRCNE

>sp|EPDC_METMP|MINOR structural pilin EpdC|Methanococcus maripaludis (strain DSM 14266

Query: 1 GDFVRLRCN 9
GD+V ++CN
Sbjct: 113 GDYVSIKCN 121


>sp|RS27_NATPD|SMALL ribosomal subunit protein eS27|Natronomonas pharaonis (strain

Query: 1 GDFVRLRCNE 10
GDF+R+ C++
Sbjct: 3 GDFIRVHCDD 12


>sp|PROB_METBF|GLUTAMATE 5-kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GDFVRLRC 8
GD VRL C
Sbjct: 325 GDVVRLEC 332


>sp|AATB_ARCFU|A-TYPE ATP synthase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GDFVRLRCNE 10
GD V+L C++
Sbjct: 72 GDIVKLNCSQ 81


>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GDFVRLRCN 9
GD V+L C+
Sbjct: 318 GDIVKLECD 326


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GDFVRLRC 8
GD+ LRC
Sbjct: 669 GDYFTLRC 676


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 DFVRLRCN 9
D VRLRC+
Sbjct: 502 DDVRLRCS 509


>sp|PROB_METMA|GLUTAMATE 5-kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GDFVRLRCN 9
GD V+L C+
Sbjct: 325 GDVVKLECD 333


>sp|RS27_PYRCJ|SMALL ribosomal subunit protein eS27|Pyrobaculum calidifontis (strain

Query: 3 FVRLRCNE 10
FVRLRC +
Sbjct: 17 FVRLRCPD 24


>sp|PROB_METAC|GLUTAMATE 5-kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GDFVRLRC 8
GD V+L C
Sbjct: 325 GDVVKLEC 332


>sp|GATD_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus abyssi (strain GE5 /

Query: 1 GDFVRLRCNE 10
GDFVR+ E
Sbjct: 15 GDFVRITKEE 24


>sp|RS27_THEAC|SMALL ribosomal subunit protein eS27|Thermoplasma acidophilum (strain

Query: 1 GDFVRLRCNE 10
G FV+++C +
Sbjct: 14 GHFVKIKCRD 23


>sp|IF1A2_HALWD|TRANSLATION initiation factor 1A 2|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GDFVRLRCNE 10
G+ VR+RC +
Sbjct: 28 GNHVRVRCQD 37


>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 4 VRLRCNE 10
VR+RC E
Sbjct: 176 VRIRCRE 182


>sp|RS27_METTH|SMALL ribosomal subunit protein eS27|Methanothermobacter

Query: 1 GDFVRLRC 8
G+F+R++C
Sbjct: 11 GNFLRVKC 18


>sp|RS27_METMA|SMALL ribosomal subunit protein eS27|Methanosarcina mazei (strain ATCC

Query: 3 FVRLRCNE 10
F+R++CN+
Sbjct: 12 FLRVKCND 19


>sp|RS27_METBF|SMALL ribosomal subunit protein eS27|Methanosarcina barkeri (strain

Query: 3 FVRLRCNE 10
F+R++CN+
Sbjct: 12 FLRVKCND 19


>sp|RS27_METAC|SMALL ribosomal subunit protein eS27|Methanosarcina acetivorans (strain

Query: 3 FVRLRCNE 10
F+R++CN+
Sbjct: 12 FLRVKCND 19


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDFVRLR 7
GD+VR+R
Sbjct: 239 GDYVRVR 245




35|Sequence|171|180|LRCNEIFPAD

>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 4 NEIFPAD 10
NEIFP D
Sbjct: 745 NEIFPQD 751


>sp|TRPD_METS3|ANTHRANILATE phosphoribosyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 LRCNEIFPAD 10
L+C EI P D
Sbjct: 242 LKCYEIAPED 251


>sp|IF5A_KORCO|TRANSLATION initiation factor 5A|Korarchaeum cryptofilum (strain OPF8)

Query: 2 RCNEIFPAD 10
R ++IFPAD
Sbjct: 54 RRSKIFPAD 62


>sp|MCRD_METFE|METHYL-COENZYME M reductase operon protein|Methanothermus fervidus

Query: 3 CNEIFP 8
C+E+FP
Sbjct: 83 CDEVFP 88


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 4 NEIFPAD 10
NE+FP D
Sbjct: 740 NELFPQD 746


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 CNEIFPAD 10
CN +FP +
Sbjct: 1134 CNRVFPEE 1141


>sp|RAD50_NANEQ|DNA double-strand break repair Rad50|Nanoarchaeum equitans (strain

Query: 1 LRCNEI 6
+RCNEI
Sbjct: 293 IRCNEI 298


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 4 NEIFPAD 10
NEI+P D
Sbjct: 739 NEIYPQD 745


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 CNEIFPAD 10
C+EI P D
Sbjct: 444 CSEIIPED 451


>sp|PURL_HALSA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 700922

Query: 3 CNEIFPAD 10
C E+ PAD
Sbjct: 305 CYEVAPAD 312


>sp|PURL_HALS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 29341

Query: 3 CNEIFPAD 10
C E+ PAD
Sbjct: 305 CYEVAPAD 312


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 EIFPAD 10
E+FPAD
Sbjct: 479 ELFPAD 484


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 5 EIFPAD 10
E+FPAD
Sbjct: 354 EVFPAD 359


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 CNEIFPAD 10
C E+ PA+
Sbjct: 441 CGEVIPAE 448


>sp|Y1303_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ1303|Methanocaldococcus jannaschii

Query: 1 LRCNEIFPAD 10
L+C EI P D
Sbjct: 233 LKCVEICPND 242




36|Sequence|176|185|IFPADILLLS

>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PADILLLS 10
PADI+L+S
Sbjct: 376 PADIVLIS 383


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 IFPADIL 7
+FPAD+L
Sbjct: 349 LFPADLL 355


>sp|GGGPS_SACS2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IFPADILLLS 10
IFP++I LLS
Sbjct: 88 IFPSNINLLS 97


>sp|GGGPS_SACI7|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IFPADILLLS 10
IFP++I LLS
Sbjct: 88 IFPSNINLLS 97


>sp|GGGPS_SACI3|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.27)

Query: 1 IFPADILLLS 10
IFP++I LLS
Sbjct: 88 IFPSNINLLS 97


>sp|GGGPS_SACI2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IFPADILLLS 10
IFP++I LLS
Sbjct: 88 IFPSNINLLS 97


>sp|GGGPS_SACI1|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IFPADILLLS 10
IFP++I LLS
Sbjct: 88 IFPSNINLLS 97


>sp|GGGPS_SACI6|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IFPADILLLS 10
IFP++I LLS
Sbjct: 88 IFPSNINLLS 97


>sp|GGGPS_SACI4|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IFPADILLLS 10
IFP++I LLS
Sbjct: 88 IFPSNINLLS 97


>sp|Y1204_ARCFU|UNCHARACTERIZED protein AF_1204|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IFPADILL 8
+FPAD++L
Sbjct: 1 MFPADVIL 8




37|Sequence|181|190|ILLLSSSDPD

>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 3 LLSSSDPD 10
L+SSSDP+
Sbjct: 526 LMSSSDPE 533


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 LLLSSSDPD 10
LLL++ DPD
Sbjct: 472 LLLAAYDPD 480


>sp|NADK_METPE|NAD kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 LSSSDPD 10
LSS+DPD
Sbjct: 49 LSSADPD 55




38|Sequence|186|195|SSDPDGLCHI

>sp|ACAR_METS5|ACRYLOYL-COENZYME A reductase|Metallosphaera sedula (strain ATCC 51363

Query: 4 PDGLCH 9
PDG CH
Sbjct: 89 PDGTCH 94


>sp|SYR_ARCFU|ARGININE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SSDPDGLCHI 10
S++PDG HI
Sbjct: 112 SANPDGPLHI 121


>sp|Y2034_SULTO|UNCHARACTERIZED solute-binding protein STK_20340|Sulfurisphaera tokodaii (strain

Query: 1 SSDPDGL 7
SSDP+GL
Sbjct: 191 SSDPEGL 197


>sp|RS2_KORCO|SMALL ribosomal subunit protein uS2|Korarchaeum cryptofilum (strain

Query: 4 PDGLCHI 10
PDGLC I
Sbjct: 51 PDGLCII 57


>sp|PROA_METBU|GAMMA-GLUTAMYL phosphate reductase|Methanococcoides burtonii (strain DSM 6242

Query: 5 DGLCHI 10
DG+CH+
Sbjct: 228 DGICHV 233


>sp|TRPE2_HALMA|ANTHRANILATE synthase component 1 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 SSDPDG 6
SSDPDG
Sbjct: 65 SSDPDG 70


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 1 SSDPDGLC 8
+ PDG+C
Sbjct: 17 TDSPDGMC 24


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 3 DPDGLCHI 10
DPD L H+
Sbjct: 24 DPDTLLHL 31


>sp|HEM1_METTH|GLUTAMYL-TRNA reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SSDPDGL 7
SSDP+G+
Sbjct: 351 SSDPEGV 357


>sp|NADA_THEGJ|QUINOLINATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 PDGLCHI 10
PDG C++
Sbjct: 169 PDGHCYV 175


>sp|PRIL_THEVO|DNA primase large subunit PriL|Thermoplasma volcanium (strain ATCC

Query: 3 DPDGLCH 9
D D LCH
Sbjct: 302 DDDKLCH 308


>sp|UPP_HALWD|URACIL phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 SDPDGLCHI 10
S P+GL H+
Sbjct: 179 SAPEGLLHV 187


>sp|PRIL_THEAC|DNA primase large subunit PriL|Thermoplasma acidophilum (strain ATCC

Query: 3 DPDGLCH 9
D D LCH
Sbjct: 313 DDDPLCH 319


>sp|SYY_NATPD|TYROSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SDPDGLCHI 10
+DPDG+ I
Sbjct: 107 ADPDGISFI 115


>sp|THIE_METB6|THIAMINE-PHOSPHATE synthase|Methanoregula boonei (strain DSM 21154

Query: 4 PDGLCHI 10
PD LC I
Sbjct: 43 PDALCRI 49




39|Sequence|191|200|GLCHIETANL

>sp|Y2090_METMA|UPF0251 protein MM_2090|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LCHIETANL 10
LC +ETANL
Sbjct: 25 LCCLETANL 33


>sp|NADB_SULTO|L-ASPARTATE oxidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GLCHIETAN 9
GLC ++T N
Sbjct: 67 GLCDVKTVN 75


>sp|IF2A_HALMA|TRANSLATION initiation factor 2 subunit|Haloarcula marismortui (strain ATCC

Query: 1 GLCHI 5
GLCHI
Sbjct: 37 GLCHI 41


>sp|PYRC_METST|DIHYDROOROTASE stadtmanae (strain ATCC 43021

Query: 2 LCHIET 7
LCHI T
Sbjct: 227 LCHIST 232


>sp|MFNA_NATPD|PROBABLE L-aspartate decarboxylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GLCHIETA 8
LCH++ A
Sbjct: 169 ALCHVDAA 176


>sp|MFNA_HALMA|PROBABLE L-aspartate decarboxylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GLCHIETA 8
LCH++ A
Sbjct: 170 ALCHVDAA 177


>sp|PYRC_PYRAE|DIHYDROOROTASE aerophilum (strain ATCC 51768

Query: 1 GLCHI 5
GLCH+
Sbjct: 232 GLCHV 236


>sp|Y807_METJA|PUTATIVE lyase MJ0807|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLCHIETAN 9
G C +ET N
Sbjct: 50 GECRVETIN 58




40|Sequence|196|205|ETANLDGETN

>sp|RNZ_METS5|RIBONUCLEASE Z|Metallosphaera sedula (strain ATCC 51363

Query: 1 ETANLDGE 8
+TANLD E
Sbjct: 145 DTANLDAE 152


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 NLDGET 9
NLDGET
Sbjct: 285 NLDGET 290


>sp|G1PDH_METTP|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothrix thermoacetophila (strain DSM

Query: 4 NLDGET 9
N+DGET
Sbjct: 139 NMDGET 144


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ETANLDGE 8
E NLDGE
Sbjct: 803 EMQNLDGE 810




41|Sequence|201|210|DGETNLKRRQ

>sp|AROA_CALMQ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 DGETNLKRR 9
DG+ LKRR
Sbjct: 108 DGDETLKRR 116


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 ETNLKRRQ 10
ETNL+RR+
Sbjct: 759 ETNLERRE 766


>sp|APGM_THEVO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DGETNLKRR 9
DG+ LKRR
Sbjct: 307 DGDYELKRR 315


>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 1 DGETNL 6
DGETNL
Sbjct: 170 DGETNL 175


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DGETNLKR 8
DGE NL+R
Sbjct: 465 DGEDNLER 472


>sp|ARLY_METMA|ARGININOSUCCINATE lyase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ETNLKRRQ 10
E+N+KRR+
Sbjct: 432 ESNIKRRK 439




42|Sequence|206|215|LKRRQVVRGF

>sp|RS6E_METS3|SMALL ribosomal subunit protein eS6|Methanobrevibacter smithii (strain

Query: 1 LKRRQVVRG 9
+KRR+ VRG
Sbjct: 85 VKRRKTVRG 93


>sp|RS6E_METS5|SMALL ribosomal subunit protein eS6|Metallosphaera sedula (strain ATCC

Query: 2 KRRQVVRG 9
+RR++VRG
Sbjct: 189 RRRKIVRG 196


>sp|RS19_METLZ|SMALL ribosomal subunit protein uS19|Methanocorpusculum labreanum

Query: 3 RRQVVRGF 10
RR+V+RGF
Sbjct: 43 RRKVLRGF 50


>sp|Y303_PYRFU|UPF0284 protein PF0303|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LKRRQVVRGF 10
LKRR + GF
Sbjct: 171 LKRRVIEEGF 180


>sp|TRPD_METTM|ANTHRANILATE phosphoribosyltransferase|Methanothermobacter marburgensis (strain

Query: 1 LKRRQVVRGF 10
+KR VV GF
Sbjct: 214 VKRAMVVHGF 223


>sp|RS6E_METST|SMALL ribosomal subunit protein eS6|Methanosphaera stadtmanae (strain

Query: 1 LKRRQVVRG 9
L+RR+ VRG
Sbjct: 87 LRRRKTVRG 95




43|Sequence|211|220|VVRGFSELVS

>sp|HIS4_THEKO|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Thermococcus kodakarensis

Query: 1 VVRGFSELVS 10
+ +GFSELV
Sbjct: 34 IAQGFSELVD 43


>sp|Y1986_AERPE|UNCHARACTERIZED protein APE_1986.1|Aeropyrum pernix (strain ATCC 700893

Query: 3 RGFSELV 9
RG+SELV
Sbjct: 26 RGYSELV 32


>sp|LPLAN_THEAC|LIPOATE-PROTEIN ligase A subunit 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VVRGFSE 7
++RGFSE
Sbjct: 214 LIRGFSE 220


>sp|RNP3_PYRFU|RIBONUCLEASE P protein component 3|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VRGFSELVS 10
VRG EL+S
Sbjct: 178 VRGVKELIS 186




44|Sequence|216|225|SELVSEFNPL

>sp|GUAAB_METPE|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosphaerula

Query: 2 ELVSEFNP 9
ELV EF P
Sbjct: 218 ELVEEFRP 225


>sp|PUR1_METJA|AMIDOPHOSPHORIBOSYLTRANSFERASE jannaschii (strain ATCC 43067

Query: 4 VSEFNPL 10
VSE+NP+
Sbjct: 235 VSEYNPV 241


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SELVSEFNP 9
+ LVSE NP
Sbjct: 4 THLVSELNP 12


>sp|PUS10_CALMQ|TRNA pseudouridine synthase Pus10|Caldivirga maquilingensis (strain ATCC

Query: 2 ELVSEFNPL 10
E+VSE PL
Sbjct: 223 EVVSELRPL 231


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SELVSEFN 8
+E VSEFN
Sbjct: 460 NEFVSEFN 467


>sp|GYAR_THEGJ|GLYOXYLATE reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 ELVSEFNPL 10
EL +EF PL
Sbjct: 190 ELKAEFKPL 198


>sp|HIS8_THEGJ|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 SELVSEFNP 9
SELV F P
Sbjct: 3 SELVKSFQP 11


>sp|NEP1_PYRAB|RIBOSOMAL RNA small subunit methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 ELVSEFNP 9
EL++E NP
Sbjct: 143 ELINEINP 150


>sp|GAD_PICTO|D-GLUCONATE/D-GALACTONATE dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 SELVSEFNPL 10
+ + EFNPL
Sbjct: 212 GQALDEFNPL 221


>sp|CDC6_METHJ|ORC1-TYPE DNA replication protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SELVSEFNPL 10
S+L+SE N L
Sbjct: 362 SDLISELNML 371




45|Sequence|221|230|EFNPLTFTSV

>sp|SUCC_DESA1|SUCCINATE--COA ligase [ADP-forming] subunit beta|Desulfurococcus amylolyticus

Query: 1 EFNPLTFT 8
EFNPL +T
Sbjct: 190 EFNPLAYT 197


>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 EFNPLTFTSV 10
EF PLT T +
Sbjct: 165 EFRPLTLTHI 174


>sp|Y277_SULAC|UPF0282 protein Saci_0277|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EFNPLTFTSV 10
EF PL F S+
Sbjct: 2 EFTPLAFESL 11


>sp|Y1085_PICTO|PUTATIVE adenine deaminase PTO1085|Picrophilus torridus (strain ATCC 700027

Query: 2 FNPLTFTSV 10
+NP+TF +
Sbjct: 108 YNPVTFNEI 116


>sp|SUCC_STAMF|SUCCINATE--COA ligase [ADP-forming] subunit beta|Staphylothermus marinus (strain

Query: 1 EFNPLTFT 8
EFNPL T
Sbjct: 189 EFNPLVKT 196




46|Sequence|226|235|TFTSVIECEK

>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 4 SVIECEK 10
S+IECEK
Sbjct: 410 SIIECEK 416


>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TFTSVIECE 9
T SVIECE
Sbjct: 63 TRESVIECE 71


>sp|KUP_METAC|PROBABLE potassium transport system protein|Methanosarcina acetivorans

Query: 2 FTSVIECE 9
F S+I+CE
Sbjct: 503 FISIIKCE 510


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 FTSVIECEK 10
F SV+EC K
Sbjct: 528 FESVLECMK 536




47|Sequence|231|240|IECEKPNNDL

>sp|NRPR_METMP|GLOBAL nitrogen regulator NrpR|Methanococcus maripaludis (strain DSM 14266

Query: 1 IECEKPNNDL 10
IE +PNND+
Sbjct: 476 IEIGRPNNDI 485


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 3 CEKPNN 8
CE PNN
Sbjct: 361 CEAPNN 366


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 3 CEKPNNDL 10
CE P+N L
Sbjct: 523 CEDPDNSL 530


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 3 CEKPNNDL 10
CEKPN +
Sbjct: 589 CEKPNESM 596


>sp|AATB_HALSA|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC

Query: 1 IECEKPNNDL 10
+E E PN D+
Sbjct: 29 VEIETPNGDV 38


>sp|AATB_HALS3|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 29341

Query: 1 IECEKPNNDL 10
+E E PN D+
Sbjct: 29 VEIETPNGDV 38


>sp|UDGA_PYRAE|TYPE-4 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IECEKPNN 8
++C PNN
Sbjct: 82 VKCRPPNN 89


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IECEKPNNDL 10
+E E PN D+
Sbjct: 29 VEIETPNGDI 38


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IECEKPNND 9
+ C KP D
Sbjct: 148 VSCNKPEED 156


>sp|Y450_METJA|UNCHARACTERIZED protein MJ0450|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CEKPNND 9
CE+PN++
Sbjct: 42 CERPNHE 48




48|Sequence|236|245|PNNDLSRFRG

>sp|ADEC_METMJ|ADENINE deaminase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 DLSRFRG 10
DL+RFRG
Sbjct: 116 DLARFRG 122


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 NNDLSRF 8
NND+S+F
Sbjct: 274 NNDISKF 280


>sp|MDH_NITMS|MALATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 DLSRFR 9
DLSRFR
Sbjct: 146 DLSRFR 151


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 1 PNNDLSRFRG 10
P D+S FRG
Sbjct: 260 PGADISGFRG 269


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PNNDLSRFRG 10
PN D+ RG
Sbjct: 517 PNKDVEEIRG 526


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 NNDLSRFR 9
NND+ +FR
Sbjct: 17 NNDVFKFR 24




49|Sequence|241|250|SRFRGCIIHD

>sp|HDRB2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 SRFRGCII 8
S FRGCI+
Sbjct: 5 SLFRGCIV 12


>sp|SELB_METJA|SELENOCYSTEINE-SPECIFIC elongation factor|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SRFRGCII 8
S FRGCI+
Sbjct: 263 SLFRGCIL 270


>sp|MTBB3_METMA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SRFRGCIIHD 10
SR GC++H+
Sbjct: 94 SRLVGCMMHE 103


>sp|MTBB2_METMA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SRFRGCIIHD 10
SR GC++H+
Sbjct: 94 SRLVGCMMHE 103


>sp|MTBB2_METBF|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri (strain Fusaro /

Query: 1 SRFRGCIIHD 10
SR GC++H+
Sbjct: 94 SRLVGCMMHE 103


>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 1 SRFRGCIIHD 10
SR GC++H+
Sbjct: 94 SRLVGCMMHE 103


>sp|MTBB1_METMA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SRFRGCIIHD 10
SR GC++H+
Sbjct: 94 SRLVGCMMHE 103


>sp|DTDA_METPE|D-AMINOACYL-TRNA deacylase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 RFRGCIIHD 10
R+R IIHD
Sbjct: 344 RYRSQIIHD 352


>sp|F16PA_METB6|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanoregula boonei (strain DSM 21154

Query: 2 RFRGCIIHD 10
RF GC + D
Sbjct: 209 RFSGCFVAD 217


>sp|LYSK_SULAC|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 FRGCIIHD 10
F GC IH+
Sbjct: 246 FEGCEIHE 253


>sp|IF6_METVS|TRANSLATION initiation factor 6|Methanococcus vannielii (strain ATCC 35089

Query: 4 RGCIIH 9
+GC++H
Sbjct: 157 KGCLVH 162


>sp|IF6_METMP|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain DSM 14266

Query: 4 RGCIIH 9
+GC++H
Sbjct: 157 KGCLVH 162


>sp|IF6_METM7|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain C7 /

Query: 4 RGCIIH 9
+GC++H
Sbjct: 157 KGCLVH 162


>sp|IF6_METM6|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain C6 /

Query: 4 RGCIIH 9
+GC++H
Sbjct: 157 KGCLVH 162


>sp|IF6_METM5|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain C5 /

Query: 4 RGCIIH 9
+GC++H
Sbjct: 157 KGCLVH 162


>sp|Y096_METJA|UNCHARACTERIZED protein MJ0096|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SRFRGCII 8
S F GC+I
Sbjct: 96 SNFMGCLI 103




50|Sequence|246|255|CIIHDNGKKA

>sp|FLAF_METJA|PUTATIVE flagella-related protein F|Methanocaldococcus jannaschii (strain

Query: 1 CIIHDNGKK 9
CI+ DNG K
Sbjct: 125 CIVSDNGNK 133


>sp|Y2784_METAR|UPF0179 protein UNCMA_27840|Methanocella arvoryzae (strain DSM 22066

Query: 1 CIIHDNGKKA 10
C++HD G KA
Sbjct: 62 CLVHDTGVKA 71


>sp|Y1064_HALMA|UPF0179 protein rrnAC1064|Haloarcula marismortui (strain ATCC 43049

Query: 1 CIIHDNGKKA 10
C +H+NG +A
Sbjct: 59 CAVHENGVRA 68


>sp|MTRA2_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanothermobacter

Query: 1 CIIHDNG 7
C++HD+G
Sbjct: 154 CVVHDSG 160


>sp|PSB_THEVO|PROTEASOME subunit beta|Thermoplasma volcanium (strain ATCC 51530

Query: 2 IIHDNGKK 9
I+H NGKK
Sbjct: 34 IMHKNGKK 41


>sp|PSB_THEAC|PROTEASOME subunit beta|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IIHDNGKK 9
I+H NGKK
Sbjct: 34 IMHKNGKK 41


>sp|MTRA2_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanothermobacter marburgensis

Query: 1 CIIHDNG 7
C++HD+G
Sbjct: 155 CVVHDSG 161


>sp|PDXS_METLZ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanocorpusculum labreanum

Query: 3 IHDNGK 8
+HDNGK
Sbjct: 198 VHDNGK 203


>sp|THYX_SULTO|FLAVIN-DEPENDENT thymidylate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 CIIHDN 6
CIIH+N
Sbjct: 203 CIIHEN 208


>sp|THYX_SULAC|FLAVIN-DEPENDENT thymidylate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 CIIHDN 6
CIIH+N
Sbjct: 203 CIIHEN 208


>sp|THYX_SACS2|FLAVIN-DEPENDENT thymidylate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 CIIHDN 6
CIIH+N
Sbjct: 204 CIIHEN 209


>sp|Y3004_HALWD|UPF0179 protein HQ_3004A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 CIIHDNGKKA 10
C +HD G +A
Sbjct: 59 CAVHDTGVRA 68


>sp|Y2319_HALLT|UPF0179 protein Hlac_2319|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 CIIHDNGKKA 10
C +HD G +A
Sbjct: 59 CAVHDAGVRA 68


>sp|Y3406_NATPD|UPF0179 protein NP_3406A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 CIIHDNGKKA 10
C +HD G A
Sbjct: 58 CAVHDTGVTA 67


>sp|Y979_METVS|UPF0179 protein Mevan_0979|Methanococcus vannielii (strain ATCC 35089

Query: 1 CIIHDNGKKA 10
C +H+NG K
Sbjct: 58 CTVHENGVKV 67


>sp|Y500_METJA|UNCHARACTERIZED protein MJ0500|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IIHDNGKKA 10
+I NGKKA
Sbjct: 39 LIESNGKKA 47


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 HDNGK 8
HDNGK
Sbjct: 520 HDNGK 524


>sp|Y939_SULTO|KELCH domain-containing protein STK_09390|Sulfurisphaera tokodaii (strain

Query: 2 IIHDNGK 8
+I+DNGK
Sbjct: 596 LIYDNGK 602


>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 1 CIIHDNG 7
I+HDNG
Sbjct: 113 VILHDNG 119


>sp|OFOB1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 1 CIIHDNG 7
I+HDNG
Sbjct: 113 VILHDNG 119


>sp|Y1728_METM5|UPF0179 protein MmarC5_1728|Methanococcus maripaludis (strain C5 /

Query: 1 CIIHDNGKK 9
C +H+NG K
Sbjct: 58 CTVHENGVK 66


>sp|Y952_METM7|UPF0179 protein MmarC7_0952|Methanococcus maripaludis (strain C7 /

Query: 1 CIIHDNGKK 9
C +H+NG K
Sbjct: 58 CTVHENGVK 66


>sp|Y993_METM6|UPF0179 protein MmarC6_0993|Methanococcus maripaludis (strain C6 /

Query: 1 CIIHDNGKK 9
C +H+NG K
Sbjct: 58 CTVHENGVK 66


>sp|Y3004_HALS3|UPF0179 protein OE_3004R|Halobacterium salinarum (strain ATCC 29341

Query: 1 CIIHDNGKKA 10
C +HD G A
Sbjct: 58 CAVHDEGAVA 67


>sp|Y1401_HALSA|UPF0179 protein VNG_1401C|Halobacterium salinarum (strain ATCC 700922

Query: 1 CIIHDNGKKA 10
C +HD G A
Sbjct: 58 CAVHDEGAVA 67


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 IIHDNGKK 9
++HD G+K
Sbjct: 459 VLHDKGEK 466


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 2 IIHDNGKK 9
+ HD+G+K
Sbjct: 210 VFHDDGEK 217


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 2 IIHDNGKK 9
+ HD+G+K
Sbjct: 210 VFHDDGEK 217


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 2 IIHDNGKK 9
+ HD+G+K
Sbjct: 210 VFHDDGEK 217


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 2 IIHDNGKK 9
+ HD+G+K
Sbjct: 211 VFHDDGEK 218


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 2 IIHDNGKK 9
+ HD+G+K
Sbjct: 210 VFHDDGEK 217


>sp|Y104_SACS2|UNCHARACTERIZED aminotransferase SSO0104|Saccharolobus solfataricus (strain ATCC

Query: 4 HDNGKK 9
H NGKK
Sbjct: 164 HSNGKK 169


>sp|Y1033_METBU|UPF0179 protein Mbur_1033|Methanococcoides burtonii (strain DSM 6242

Query: 1 CIIHDNG 7
C +HD G
Sbjct: 62 CFVHDKG 68


>sp|Y540_METJA|UNCHARACTERIZED protein MJ0540|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IIHDNGKK 9
++H NG+K
Sbjct: 71 LVHSNGEK 78




51|Sequence|251|260|NGKKAGLYKE

>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 2 GKKAGLYKE 10
GKKAG++ E
Sbjct: 503 GKKAGVFGE 511


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GKKAGLY 8
GK+AGLY
Sbjct: 447 GKRAGLY 453


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GKKAGLY 8
GK+AGLY
Sbjct: 447 GKRAGLY 453


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GKKAGLY 8
GK+AGLY
Sbjct: 447 GKRAGLY 453


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GKKAGLY 8
GK+AGLY
Sbjct: 447 GKRAGLY 453


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GKKAGLY 8
GK+AGLY
Sbjct: 447 GKRAGLY 453


>sp|PURP_METS5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Metallosphaera sedula (strain ATCC

Query: 1 NGKKAGLYK 9
NGK+ G Y+
Sbjct: 30 NGKREGFYR 38


>sp|AMPPA_METJA|AMP phosphorylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NGKKAGLY 8
N KKAG+Y
Sbjct: 444 NDKKAGIY 451


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain

Query: 2 GKKAGLYKE 10
KKAG+Y E
Sbjct: 56 AKKAGVYME 64


>sp|HDG_METAC|HYPOXANTHINE DNA glycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NGKKAGLYK 9
NG+KAG Y+
Sbjct: 113 NGRKAGEYE 121


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 2 GKKAGLYKE 10
KKAG+Y E
Sbjct: 56 AKKAGVYME 64


>sp|Y635_METJA|UNCHARACTERIZED protein MJ0635|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NGKKAGLY 8
NG+K G+Y
Sbjct: 78 NGEKTGIY 85


>sp|IF2P_METHJ|PROBABLE translation initiation factor IF-2|Methanospirillum hungatei JF-1

Query: 1 NGKKAGLYK 9
+GKKAG K
Sbjct: 515 DGKKAGTLK 523


>sp|Y1201_ARCFU|UNCHARACTERIZED protein AF_1201|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GKKAGLYKE 10
GKK GL+ E
Sbjct: 122 GKKEGLFDE 130


>sp|HDG_METBF|HYPOXANTHINE DNA glycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NGKKAGLYK 9
NGKK+G Y+
Sbjct: 113 NGKKSGEYE 121




52|Sequence|256|265|GLYKENLLLR

>sp|TRPD_METKA|ANTHRANILATE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 GLYKENLL 8
G+Y ENLL
Sbjct: 193 GVYSENLL 200


>sp|NADK_METHJ|NAD kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LYKENLL 8
+YKENLL
Sbjct: 34 IYKENLL 40


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LYKENLLLR 10
LY EN++LR
Sbjct: 281 LYLENVILR 289


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 1 GLYKENLL 8
GL++EN+L
Sbjct: 229 GLFEENIL 236


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LYKENLLLR 10
+YKENL L+
Sbjct: 377 MYKENLKLK 385


>sp|PELO_PYRFU|PROTEIN pelota homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GLYKENLL 8
G YKEN +
Sbjct: 208 GFYKENFV 215


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 LYKENLLLR 10
+YKENL ++
Sbjct: 377 MYKENLKIK 385


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 LYKENLLLR 10
+YKENL ++
Sbjct: 377 MYKENLKIK 385


>sp|SYP_METM6|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 LYKENLLLR 10
+YKENL ++
Sbjct: 377 MYKENLKIK 385


>sp|Y1024_METJA|UNCHARACTERIZED protein MJ1024|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LYKENLLLR 10
LY+ENL L+
Sbjct: 386 LYEENLTLK 394


>sp|GCH1_SULTO|GTP cyclohydrolase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GLYKENLLLR 10
GL+K N+ LR
Sbjct: 182 GLFKNNVSLR 191


>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 GLYKENLL 8
GL++EN+L
Sbjct: 227 GLFEENIL 234


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 GLYKENLL 8
GL++EN+L
Sbjct: 224 GLFEENIL 231


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 GLYKENLL 8
GL++EN+L
Sbjct: 228 GLFEENIL 235


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 GLYKENLL 8
GL++EN+L
Sbjct: 228 GLFEENIL 235


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 GLYKENLL 8
GL++EN+L
Sbjct: 228 GLFEENIL 235


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 GLYKENLL 8
GL++EN+L
Sbjct: 228 GLFEENIL 235


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 GLYKENLL 8
GL++EN+L
Sbjct: 228 GLFEENIL 235


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 GLYKENLL 8
GL++EN+L
Sbjct: 228 GLFEENIL 235




53|Sequence|261|270|NLLLRGCTLR

>sp|Y1236_ARCFU|UNCHARACTERIZED protein AF_1236|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LLLRGCTLR 10
+LLRGC L
Sbjct: 85 ILLRGCGLH 93




54|Sequence|266|275|GCTLRNTDAV

>sp|MOAA_THEKO|PROBABLE GTP 3',8-cyclase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 CTLRNTDAV 10
C LRN D +
Sbjct: 268 CLLRNNDLI 276


>sp|RF1_METMP|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain DSM

Query: 2 CTLRNTDAV 10
C + NTD +
Sbjct: 384 CNMHNTDLI 392




55|Sequence|271|280|NTDAVVGIVI

>sp|MTNA_ARCFU|PUTATIVE methylthioribose-1-phosphate isomerase|Archaeoglobus fulgidus

Query: 2 TDAVVGIVI 10
TD++VGIV+
Sbjct: 211 TDSMVGIVM 219


>sp|RS28_PYRAR|SMALL ribosomal subunit protein eS28|Pyrobaculum arsenaticum (strain

Query: 3 DAVVGIVI 10
DAV GIVI
Sbjct: 12 DAVAGIVI 19


>sp|PELO_METBU|PROTEIN pelota homolog|Methanococcoides burtonii (strain DSM 6242

Query: 1 NTDAVVGIVI 10
N+D V GI++
Sbjct: 213 NSDLVAGILV 222


>sp|AATF_METTP|A-TYPE ATP synthase subunit F|Methanothrix thermoacetophila (strain DSM

Query: 1 NTDAVVGIVI 10
N+DAV+G +
Sbjct: 8 NSDAVIGFSL 17




56|Sequence|276|285|VGIVIYAGHE

>sp|CISY_PYRFU|CITRATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VGIVIYAGHE 10
V +++YA HE
Sbjct: 181 VALILYAEHE 190


>sp|MTRH_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanopyrus kandleri (strain AV19

Query: 2 GIVIYAGHE 10
G + YAGH+
Sbjct: 32 GTIFYAGHK 40


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii

Query: 2 GIVIYAG 8
G+VI+AG
Sbjct: 87 GVVIFAG 93


>sp|RF1_METMP|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain

Query: 1 VGIVIYAG 8
+G++I+AG
Sbjct: 86 MGVIIFAG 93


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7

Query: 1 VGIVIYAG 8
+G++I+AG
Sbjct: 86 MGVIIFAG 93


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6

Query: 1 VGIVIYAG 8
+G++I+AG
Sbjct: 86 MGVIIFAG 93


>sp|RF1_METM5|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C5

Query: 1 VGIVIYAG 8
+G++I+AG
Sbjct: 86 MGVIIFAG 93


>sp|CHED1_METAC|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina acetivorans

Query: 1 VGIVIYAGHE 10
VG+ IY HE
Sbjct: 32 VGVTIYDRHE 41


>sp|Y1554_METJA|UNCHARACTERIZED protein MJ1554|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGIVIYAGH 9
+G IY GH
Sbjct: 58 IGNYIYVGH 66


>sp|LEU3_HALVD|3-ISOPROPYLMALATE dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 5 IYAGHE 10
+Y+GHE
Sbjct: 118 VYSGHE 123


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GIVIYAG 8
G+V+YAG
Sbjct: 201 GMVVYAG 207




57|Sequence|281|290|YAGHETKALL

>sp|Y1571_AERPE|UNCHARACTERIZED protein APE_1571.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 YAGHETKALL 10
Y GH KALL
Sbjct: 370 YPGHGKKALL 379


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 HETKALL 10
HE+KALL
Sbjct: 6 HESKALL 12


>sp|IF2G_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 YAGHETK 7
Y GHET+
Sbjct: 75 YCGHETE 81


>sp|IF2G_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC

Query: 1 YAGHETK 7
Y GHET+
Sbjct: 75 YCGHETE 81


>sp|IF2G_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 YAGHETK 7
Y GHET+
Sbjct: 75 YCGHETE 81


>sp|IF2G_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 1 YAGHETK 7
Y GHET+
Sbjct: 75 YCGHETE 81


>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 1 YAGHETK 7
Y GHET+
Sbjct: 75 YCGHETE 81


>sp|G3P_HALSA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 YAGHETKAL 9
YA H+T A+
Sbjct: 98 YAAHDTPAI 106


>sp|G3P_HALS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 29341

Query: 1 YAGHETKAL 9
YA H+T A+
Sbjct: 98 YAAHDTPAI 106


>sp|FPOL_METMA|F(420)H(2) dehydrogenase subunit L|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YAGHETKALL 10
Y GHE+ A++
Sbjct: 477 YHGHESPAIM 486


>sp|RL24_ARCFU|LARGE ribosomal subunit protein uL24|Archaeoglobus fulgidus (strain

Query: 1 YAGHETKAL 9
+AGHE + L
Sbjct: 61 FAGHEGRVL 69


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 4 HETKALL 10
HE KALL
Sbjct: 191 HEVKALL 197




58|Sequence|286|295|TKALLNNSGP

>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 LLNNSG 9
LLNNSG
Sbjct: 855 LLNNSG 860


>sp|CAS1_METTH|CRISPR-ASSOCIATED endonuclease Cas1|Methanothermobacter thermautotrophicus (strain

Query: 4 LLNNSG 9
LLNNSG
Sbjct: 274 LLNNSG 279


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 1 TKALLNNSG 9
TKA++++SG
Sbjct: 158 TKAIMSSSG 166


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 1 TKALLNNSG 9
TKA++++SG
Sbjct: 158 TKAIMSSSG 166


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 1 TKALLNNSG 9
TKA++++SG
Sbjct: 158 TKAIMSSSG 166


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 1 TKALLNNSG 9
TKA++++SG
Sbjct: 158 TKAIMSSSG 166




59|Sequence|291|300|NNSGPRYKRS

>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 GPRYKR 9
GP+YKR
Sbjct: 896 GPKYKR 901


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 GPRYK 8
GPRYK
Sbjct: 783 GPRYK 787


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 NSGPRY 7
+SGPRY
Sbjct: 401 SSGPRY 406


>sp|RL18_HALLT|LARGE ribosomal subunit protein uL18|Halorubrum lacusprofundi (strain

Query: 3 SGPRYK 8
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|RL18_METMA|LARGE ribosomal subunit protein uL18|Methanosarcina mazei (strain

Query: 3 SGPRYK 8
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|RL18_HALSA|LARGE ribosomal subunit protein uL18|Halobacterium salinarum (strain

Query: 3 SGPRYK 8
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|RL18_HALS3|LARGE ribosomal subunit protein uL18|Halobacterium salinarum (strain

Query: 3 SGPRYK 8
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|RL18_METBF|LARGE ribosomal subunit protein uL18|Methanosarcina barkeri (strain

Query: 3 SGPRYK 8
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|RL18_HALMA|LARGE ribosomal subunit protein uL18|Haloarcula marismortui (strain

Query: 3 SGPRYK 8
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|RL18_METAC|LARGE ribosomal subunit protein uL18|Methanosarcina acetivorans

Query: 3 SGPRYK 8
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|RL18_HALMT|LARGE ribosomal subunit protein uL18|Haloferax mediterranei (strain

Query: 3 SGPRYK 8
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|YPV4_METTF|UNCHARACTERIZED protein ORF4|Methanothermobacter thermautotrophicus

Query: 3 SGPRYKRS 10
SGPR KR+
Sbjct: 115 SGPREKRA 122


>sp|RL18_HALVD|LARGE ribosomal subunit protein uL18|Haloferax volcanii (strain ATCC

Query: 3 SGPRYK 8
+GPRYK
Sbjct: 3 TGPRYK 8


>sp|YPZ4_METTF|UNCHARACTERIZED protein ORF4'|Methanothermobacter thermautotrophicus

Query: 3 SGPRYKRS 10
SGPR KR+
Sbjct: 115 SGPREKRA 122




60|Sequence|296|305|RYKRSKLERQ

>sp|NK_METTH|NUCLEOSIDE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 YKRSKLER 9
Y RS+LER
Sbjct: 171 YSRSQLER 178




61|Sequence|301|310|KLERQMNCDV

>sp|CBIX_ARCFU|SIROHYDROCHLORIN cobaltochelatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RQMNCDV 10
R+MNCD+
Sbjct: 55 REMNCDI 61


>sp|TIAS_PYRNV|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrobaculum neutrophilum

Query: 1 KLERQMNCDV 10
+LER + CDV
Sbjct: 298 ELERCLRCDV 307


>sp|HYD2G_PYRFU|SULFHYDROGENASE 2 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LERQMNCDV 10
LER+M C V
Sbjct: 244 LERRMRCGV 252


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LERQMNCDV 10
LER+M C +
Sbjct: 247 LERRMKCGI 255


>sp|COFD_METMP|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain DSM 14266

Query: 3 ERQMNCDV 10
+++MNC+V
Sbjct: 275 KKEMNCEV 282


>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 1 KLERQMNCDV 10
KLE ++ CD+
Sbjct: 559 KLEYELFCDI 568


>sp|Y2225_ARCFU|UNCHARACTERIZED protein AF_2225|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KLERQMNCD 9
K++RQ+ C+
Sbjct: 241 KIDRQIRCE 249


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 1 KLERQMNCDV 10
+LE+++NC +
Sbjct: 600 QLEKKLNCPI 609


>sp|SYFB_SACI7|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LERQMNCDV 10
+ +MNCD+
Sbjct: 298 MRMRMNCDI 306


>sp|SYFB_SACI1|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LERQMNCDV 10
+ +MNCD+
Sbjct: 298 MRMRMNCDI 306


>sp|SYFB_SACI2|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LERQMNCDV 10
+ +MNCD+
Sbjct: 298 MRMRMNCDI 306


>sp|SYFB_SACI6|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LERQMNCDV 10
+ +MNCD+
Sbjct: 298 MRMRMNCDI 306


>sp|SYFB_SACI4|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LERQMNCDV 10
+ +MNCD+
Sbjct: 298 MRMRMNCDI 306


>sp|SYFB_SACI3|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.16.27)

Query: 2 LERQMNCDV 10
+ +MNCD+
Sbjct: 298 MRMRMNCDI 306




62|Sequence|306|315|MNCDVLWCVL

>sp|CBIX_ARCFU|SIROHYDROCHLORIN cobaltochelatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MNCDVLWCV 9
MNCD+++ V
Sbjct: 57 MNCDIIYVV 65


>sp|Y773_ARCFU|UNCHARACTERIZED protein AF_0773|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DVLWCVL 10
D LWC+L
Sbjct: 53 DTLWCLL 59


>sp|THII_THEAC|TRNA sulfurtransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 CDVLWCVL 10
CD+L+C L
Sbjct: 195 CDILFCSL 202


>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 MNCDVLWC 8
+NCD ++C
Sbjct: 138 LNCDSVYC 145


>sp|Y429_METAC|PUTATIVE nickel insertion protein|Methanosarcina acetivorans (strain ATCC

Query: 1 MNCDVLWC 8
+NCD ++C
Sbjct: 138 LNCDSVYC 145


>sp|Y1617_METMA|PUTATIVE nickel insertion protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MNCDVLWC 8
+NCD ++C
Sbjct: 138 LNCDSVYC 145


>sp|Y686_ARCFU|UNCHARACTERIZED protein AF_0686|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DVLWC 8
D+LWC
Sbjct: 132 DILWC 136


>sp|NADK_METST|NAD kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 MNCDVLWCV 9
MN D++ CV
Sbjct: 55 MNADIVLCV 63


>sp|Y1071_ARCFU|UNCHARACTERIZED protein AF_1071|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CDVLWCVL 10
C+ WC L
Sbjct: 82 CNAFWCKL 89


>sp|DMRX_METJA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MNCDVLWCV 9
+N ++WC+
Sbjct: 7 INMKIVWCI 15


>sp|THII_THEVO|TRNA sulfurtransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 CDVLWCVL 10
CD+ +C L
Sbjct: 195 CDIFFCSL 202


>sp|CBIA_METVS|COBYRINATE a,c-diamide synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 NCDVLW 7
NCD+L+
Sbjct: 292 NCDILY 297


>sp|FNO_METJA|F420-DEPENDENT NADP reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MNCDVLWC 8
++CD+L C
Sbjct: 154 VDCDILVC 161


>sp|Y620_METKA|UPF0425 pyridoxal phosphate-dependent protein MK0620|Methanopyrus kandleri

Query: 3 CDVLWCVL 10
CDV W V+
Sbjct: 151 CDVRWNVV 158


>sp|IF1A_METMP|TRANSLATION initiation factor 1A|Methanococcus maripaludis (strain DSM 14266

Query: 3 CDVLW 7
CDV+W
Sbjct: 80 CDVIW 84


>sp|IF1A_METM7|TRANSLATION initiation factor 1A|Methanococcus maripaludis (strain C7 /

Query: 3 CDVLW 7
CDV+W
Sbjct: 80 CDVIW 84


>sp|IF1A_METM6|TRANSLATION initiation factor 1A|Methanococcus maripaludis (strain C6 /

Query: 3 CDVLW 7
CDV+W
Sbjct: 80 CDVIW 84


>sp|IF1A_METM5|TRANSLATION initiation factor 1A|Methanococcus maripaludis (strain C5 /

Query: 3 CDVLW 7
CDV+W
Sbjct: 79 CDVIW 83


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 1 MNCDVL 6
+NCD+L
Sbjct: 101 LNCDIL 106


>sp|IF1A_META3|TRANSLATION initiation factor 1A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 CDVLW 7
CD++W
Sbjct: 80 CDIIW 84


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 3 CDVLWCV 9
CD+ W V
Sbjct: 410 CDMAWAV 416


>sp|IF1A_METJA|TRANSLATION initiation factor 1A|Methanocaldococcus jannaschii (strain ATCC

Query: 3 CDVLW 7
CD++W
Sbjct: 78 CDIIW 82




63|Sequence|311|320|LWCVLLLVCM

***** No hits found ******


64|Sequence|316|325|LLVCMSLFSA

***** No hits found ******


65|Sequence|321|330|SLFSAVGHGL

>sp|RIFK_AERPE|RIBOFLAVIN kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SLFSAVGHG 9
++FS +GHG
Sbjct: 9 TVFSGLGHG 17


>sp|TRPB_THEON|TRYPTOPHAN synthase beta chain|Thermococcus onnurineus (strain NA1)

Query: 2 LFSAVGHGL 10
LF+ GHGL
Sbjct: 406 LFNLSGHGL 414


>sp|TRPB_THEGJ|TRYPTOPHAN synthase beta chain|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LFSAVGHGL 10
LF+ GHGL
Sbjct: 406 LFNLSGHGL 414


>sp|TRPB_PYRHO|TRYPTOPHAN synthase beta chain|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LFSAVGHGL 10
LF+ GHGL
Sbjct: 417 LFNLSGHGL 425


>sp|TRPB2_PYRFU|TRYPTOPHAN synthase beta chain 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LFSAVGHGL 10
LF+ GHGL
Sbjct: 406 LFNLSGHGL 414


>sp|TRPB2_PYRAB|TRYPTOPHAN synthase beta chain 2|Pyrococcus abyssi (strain GE5 /

Query: 2 LFSAVGHGL 10
LF+ GHGL
Sbjct: 406 LFNLSGHGL 414


>sp|TRPB_DESA1|TRYPTOPHAN synthase beta chain|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 LFSAVGHGL 10
LF+ GHGL
Sbjct: 410 LFNLSGHGL 418




66|Sequence|326|335|VGHGLWIWRY

>sp|AROC_METTH|CHORISMATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GHGLWIWR 9
GHG + WR
Sbjct: 112 GHGDYTWR 119


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 GLWIWRY 10
G WIW++
Sbjct: 602 GSWIWQH 608


>sp|AROC_METST|CHORISMATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GHGLWIWR 9
GHG + WR
Sbjct: 105 GHGDFCWR 112


>sp|TRET_THELN|TREHALOSE synthase|Thermococcus litoralis (strain ATCC 51850

Query: 6 WIWR 9
WIWR
Sbjct: 148 WIWR 151


>sp|TRET_PYRFU|TREHALOSE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 6 WIWR 9
WIWR
Sbjct: 148 WIWR 151


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 VGHGLWIW 8
+G G W+W
Sbjct: 384 LGEGGWVW 391


>sp|AKSA_METKA|HOMOCITRATE synthase AksA|Methanopyrus kandleri (strain AV19 /

Query: 3 HGLWI 7
HGLW+
Sbjct: 142 HGLWV 146


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 1 VGHGLWIWR 9
VG+GL +WR
Sbjct: 522 VGNGLVLWR 530


>sp|Y286_METJA|UNCHARACTERIZED protein MJ0286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 LWIWRY 10
LW W+Y
Sbjct: 39 LWRWKY 44


>sp|TRUA_METBF|TRNA pseudouridine synthase A|Methanosarcina barkeri (strain Fusaro /

Query: 4 GLWIWRY 10
G+W+W +
Sbjct: 87 GIWVWAH 93


>sp|NADK_SULTO|NAD kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 HGLWIWRY 10
G W W Y
Sbjct: 146 QGSWAWSY 153


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 4 GLWIWRY 10
G W+W++
Sbjct: 602 GSWVWQH 608


>sp|Y066_METJA|UNCHARACTERIZED protein MJ0066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGHGLWIWRY 10
+ GLW W++
Sbjct: 468 IKKGLWRWKH 477


>sp|MTAD_THEON|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus onnurineus (strain NA1)

Query: 1 VGHGLWI 7
+ HG+W+
Sbjct: 243 IAHGVWL 249


>sp|MTAD_THEKO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VGHGLWI 7
+ HG+W+
Sbjct: 243 IAHGVWL 249


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 3 HGLWI 7
HG+WI
Sbjct: 391 HGVWI 395


>sp|THI4_PYRAR|THIAMINE thiazole synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 LWIW 8
LWIW
Sbjct: 140 LWIW 143


>sp|THI4_PYRAE|THIAMINE thiazole synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 LWIW 8
LWIW
Sbjct: 140 LWIW 143


>sp|THI4_PYRCJ|THIAMINE thiazole synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 LWIW 8
LWIW
Sbjct: 140 LWIW 143


>sp|LYSJ_PYRHO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 GHGLWIW 8
G G+++W
Sbjct: 13 GEGIYVW 19


>sp|LYSJ_PYRFU|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 GHGLWIW 8
G G+++W
Sbjct: 13 GEGIYVW 19


>sp|LYSJ_PYRAB|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 GHGLWIW 8
G G+++W
Sbjct: 13 GEGIYVW 19


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 HGLWIWR 9
H +WI+R
Sbjct: 100 HTIWIYR 106




67|Sequence|331|340|WIWRYQEKKS

>sp|SYH_THEVO|HISTIDINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 IWRYQEKKS 10
+WRY+E ++
Sbjct: 105 VWRYEEPQA 113


>sp|SYH_THEAC|HISTIDINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IWRYQEKKS 10
+WRY+E ++
Sbjct: 108 VWRYEEPQA 116


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 IWRYQEKK 9
+WRY+E +
Sbjct: 105 VWRYEEPQ 112


>sp|CDC6_PYRAB|ORC1-TYPE DNA replication protein|Pyrococcus abyssi (strain GE5 /

Query: 2 IWRYQEK 8
+WR QEK
Sbjct: 288 VWRAQEK 294


>sp|PANB_PYRFU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WRYQEKKS 10
W YQ+K++
Sbjct: 262 WEYQDKET 269


>sp|SYH_HALSA|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 WRYQEKK 9
WRY+E +
Sbjct: 106 WRYEEPQ 112


>sp|SYH_HALS3|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 WRYQEKK 9
WRY+E +
Sbjct: 106 WRYEEPQ 112


>sp|SYH_HALMA|HISTIDINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 WRYQEKK 9
WRY+E +
Sbjct: 106 WRYEEPQ 112


>sp|THYX_HALMA|FLAVIN-DEPENDENT thymidylate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 WIWRYQEKKS 10
WI R Q+K S
Sbjct: 129 WIGRNQQKAS 138


>sp|UDGA_SULTO|TYPE-4 uracil-DNA glycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WIWRYQEKK 9
++W+Y+EK+
Sbjct: 148 YVWKYKEKE 156


>sp|SYY_PYRAR|TYROSINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 IWRYQE 7
+W YQE
Sbjct: 315 VWSYQE 320


>sp|SYY_PYRCJ|TYROSINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 IWRYQE 7
+W+Y+E
Sbjct: 315 VWKYEE 320


>sp|SYH_AERPE|HISTIDINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 IWRYQE 7
IWR+Q+
Sbjct: 66 IWRFQD 71




68|Sequence|336|345|QEKKSLFYVP

>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 EKKSLFYVP 10
EKKS +Y+P
Sbjct: 268 EKKSKYYIP 276


>sp|SEPS_METMA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QEKKSLFYVP 10
EK+S +YVP
Sbjct: 269 DEKRSKYYVP 278


>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 QEKKSLFYVP 10
EK+S +YVP
Sbjct: 269 DEKRSKYYVP 278


>sp|SEPS_METAC|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EKKSLFYVP 10
EK+S +YVP
Sbjct: 270 EKRSKYYVP 278


>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EKKSLFYVP 10
EKK L Y+P
Sbjct: 445 EKKGLEYIP 453


>sp|SEPS_METTP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 EKKSLFYVP 10
EK+S +Y+P
Sbjct: 271 EKRSKYYIP 279


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QEKKSLFYVP 10
EK+S +Y+P
Sbjct: 269 DEKRSKYYIP 278


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 EKKSLFYVP 10
EK+S +Y+P
Sbjct: 271 EKRSKYYMP 279


>sp|SEPS_ARCFU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QEKKSLFYVP 10
EK+S +Y+P
Sbjct: 267 DEKRSKYYIP 276


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EKKSLFYVP 10
EK+S +Y+P
Sbjct: 271 EKRSKYYMP 279


>sp|WTPC_PYRAB|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus abyssi (strain GE5 /

Query: 2 EKKSLFYVP 10
EK++L Y+P
Sbjct: 70 EKRNLAYIP 78


>sp|WTPC_THEKO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Thermococcus kodakarensis (strain

Query: 2 EKKSLFYVP 10
EK+ L Y+P
Sbjct: 71 EKRGLAYIP 79


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QEKKSLFYVP 10
EKKS +Y P
Sbjct: 267 DEKKSKYYTP 276


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QEKKSLFY 8
Q KK++FY
Sbjct: 30 QNKKAIFY 37


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 1 QEKKSLFYVP 10
EKKS +Y P
Sbjct: 267 DEKKSKYYTP 276


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 1 QEKKSLFYVP 10
EKKS +Y P
Sbjct: 267 DEKKSKYYTP 276


>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 1 QEKKSLFYVP 10
EKKS +Y P
Sbjct: 267 DEKKSKYYTP 276


>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QEKKSLFYVP 10
EKKS +Y P
Sbjct: 269 DEKKSKYYTP 278


>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QEKKSLFYVP 10
EKKS +Y P
Sbjct: 269 DEKKSKYYTP 278


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 QEKKSLFYVP 10
EKKS +Y P
Sbjct: 267 DEKKSKYYTP 276


>sp|TFE_SULTO|TRANSCRIPTION factor E|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QEKKSLFY 8
QEK SL+Y
Sbjct: 109 QEKDSLYY 116


>sp|SEPS_METLZ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 EKKSLFYVP 10
EK+S +Y+P
Sbjct: 271 EKRSKYYMP 279


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain

Query: 1 QEKKSLFY 8
+EKK+ FY
Sbjct: 19 EEKKTTFY 26


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 1 QEKKSLFY 8
+EKK+ FY
Sbjct: 19 EEKKTTFY 26


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 QEKKSLFY 8
+EKK+ FY
Sbjct: 23 EEKKTTFY 30


>sp|WTPC_PYRFU|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus furiosus (strain ATCC

Query: 2 EKKSLFYVP 10
EK+ + YVP
Sbjct: 70 EKRGIAYVP 78


>sp|CMR6_SACS2|CRISPR system CMR subunit Cmr6|Saccharolobus solfataricus (strain ATCC

Query: 1 QEKKSLF 7
+EKKSLF
Sbjct: 71 EEKKSLF 77


>sp|TFE_SULAC|TRANSCRIPTION factor E|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QEKKSLFY 8
QEK LFY
Sbjct: 101 QEKDGLFY 108


>sp|Y412_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 QEKKSLFYV 9
+EKK++F+V
Sbjct: 196 KEKKTVFFV 204




69|Sequence|341|350|LFYVPKSDGS

>sp|SYR_HALSA|ARGININE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 FYVPKSDGS 10
FY+ KSDGS
Sbjct: 363 FYIVKSDGS 371


>sp|Y978_PYRFU|UPF0252 protein PF0978|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LFYVPKSDGS 10
L+YV KS+GS
Sbjct: 182 LYYVSKSNGS 191


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 LFYVPKSDG 9
+FY+P+ DG
Sbjct: 576 VFYIPEVDG 584


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 LFYVPKSDG 9
+FY+P+ DG
Sbjct: 283 VFYIPEVDG 291


>sp|ACDB_METKA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanopyrus kandleri

Query: 1 LFYVPKSDG 9
+FY+P+ DG
Sbjct: 289 VFYIPEVDG 297


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LFYVPKSDG 9
+ YVPK DG
Sbjct: 895 VIYVPKQDG 903


>sp|SYS_HALLT|SERINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 FYVPKSDGS 10
FYV K DG+
Sbjct: 166 FYVAKGDGA 174


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 2 FYVPKSDG 9
FY+P+ DG
Sbjct: 285 FYIPELDG 292


>sp|RRP42_THEVO|EXOSOME complex component Rrp42|Thermoplasma volcanium (strain ATCC 51530

Query: 3 YVPKSDGS 10
YVP+++GS
Sbjct: 44 YVPRANGS 51


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 FYVPKSDGS 10
FY+ +SDG+
Sbjct: 367 FYLTRSDGT 375


>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FYVPKSDGS 10
FYV KS+G+
Sbjct: 30 FYVEKSEGA 38


>sp|RS6E_METS3|SMALL ribosomal subunit protein eS6|Methanobrevibacter smithii (strain

Query: 3 YVPKSDG 9
Y PKSDG
Sbjct: 78 YHPKSDG 84


>sp|RRP42_THEAC|EXOSOME complex component Rrp42|Thermoplasma acidophilum (strain ATCC

Query: 3 YVPKSDGS 10
Y+P+++GS
Sbjct: 44 YIPRANGS 51


>sp|APGM2_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanocaldococcus jannaschii (strain

Query: 2 FYVPKSD 8
+Y+PK D
Sbjct: 415 YYIPKDD 421


>sp|TOP6A_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LFYVPKSDGS 10
L ++P+ DGS
Sbjct: 137 LGFIPEEDGS 146


>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 3 YVPKSDGS 10
Y+PKSD S
Sbjct: 198 YMPKSDFS 205


>sp|AGLJ_HALVD|GLYCOSYLTRANSFERASE AglJ|Haloferax volcanii (strain ATCC 29605

Query: 3 YVPKSDGS 10
Y P+ DGS
Sbjct: 195 YYPRPDGS 202


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 2 FYVPKSDGS 10
FYV +++GS
Sbjct: 37 FYVERAEGS 45


>sp|RL4_HALMA|LARGE ribosomal subunit protein uL4|Haloarcula marismortui (strain ATCC

Query: 3 YVPKSDG 9
+VPK DG
Sbjct: 69 HVPKQDG 75


>sp|ALDC_METMA|ALPHA-ACETOLACTATE decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LFYVPKSDGS 10
LFY K DG+
Sbjct: 163 LFYAVKVDGN 172


>sp|RS6E_SULAC|SMALL ribosomal subunit protein eS6|Sulfolobus acidocaldarius (strain

Query: 3 YVPKSDG 9
Y PK DG
Sbjct: 182 YYPKEDG 188


>sp|Y1307_METJA|UNCHARACTERIZED protein MJ1307|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LFYVPKSD 8
LF+ P+SD
Sbjct: 90 LFHAPESD 97


>sp|TRPF_SULAC|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LFYVPKSD 8
+ YVP SD
Sbjct: 97 ILYVPSSD 104


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 YVPKSDG 9
+VPK DG
Sbjct: 33 FVPKMDG 39




70|Sequence|346|355|KSDGSSLSPV

>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DGSSLSP 9
DGSSL P
Sbjct: 434 DGSSLDP 440


>sp|TRUA_THEGJ|TRNA pseudouridine synthase A|Thermococcus gammatolerans (strain DSM

Query: 1 KSDGSSLS 8
K+DG SLS
Sbjct: 233 KTDGKSLS 240


>sp|SYR_HALSA|ARGININE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 KSDGSSL 7
KSDGS+L
Sbjct: 367 KSDGSTL 373


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 3 DGSSLSPV 10
DGS L PV
Sbjct: 282 DGSELEPV 289




71|Sequence|351|360|SLSPVTAAVY

>sp|HUTH_THEVO|PROBABLE histidine ammonia-lyase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LSPVTAAVY 10
+SPVT A+Y
Sbjct: 451 ISPVTKAIY 459


>sp|CFBD_METJA|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanocaldococcus

Query: 3 SPVTAAVY 10
SP+ AA+Y
Sbjct: 8 SPIAAAMY 15


>sp|LEUC2_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 3 SPVTAAV 9
SPVTAAV
Sbjct: 360 SPVTAAV 366


>sp|GLT_PYRHO|SODIUM-ASPARTATE symporter Glt(Ph)|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SLSPVTAAVY 10
L+ VTAAVY
Sbjct: 227 ELAKVTAAVY 236


>sp|LEUC2_METKA|3-ISOPROPYLMALATE dehydratase large subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 3 SPVTAAV 9
SPVTAAV
Sbjct: 381 SPVTAAV 387




72|Sequence|356|365|TAAVYSFLTM

>sp|Y452_PYRFU|UPF0216 protein PF0452|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TAAVYSFLT 9
T VY+F+T
Sbjct: 126 TTTVYAFIT 134




73|Sequence|361|370|SFLTMIIVLQ

***** No hits found ******


74|Sequence|366|375|IIVLQVLIPI

>sp|RTCA_CALMQ|RNA 3'-terminal phosphate cyclase|Caldivirga maquilingensis (strain

Query: 2 IVLQVLIPI 10
+VLQ L+P+
Sbjct: 97 LVLQTLLPV 105




75|Sequence|371|380|VLIPISLYVS

>sp|KAE1_ARCFU|TRNA N6-adenosine threonylcarbamoyltransferase|Archaeoglobus fulgidus

Query: 4 PISLYVS 10
P+SLYVS
Sbjct: 122 PVSLYVS 128


>sp|KAE1B_METTH|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 PISLYVS 10
P+SLYVS
Sbjct: 125 PVSLYVS 131


>sp|KAE1_METKA|TRNA N6-adenosine threonylcarbamoyltransferase|Methanopyrus kandleri

Query: 4 PISLYVS 10
P++LYVS
Sbjct: 131 PVTLYVS 137


>sp|KAE1B_METS3|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 PISLYVS 10
P++LYVS
Sbjct: 128 PVTLYVS 134


>sp|TRUD_SACS2|PROBABLE tRNA pseudouridine synthase D|Saccharolobus solfataricus (strain

Query: 2 LIPISLYV 9
IPISLY+
Sbjct: 255 FIPISLYL 262


>sp|Y1055_METJA|UNCHARACTERIZED protein MJ1055|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PISLYVS 10
PISLY S
Sbjct: 153 PISLYAS 159


>sp|Y1317_METJA|UNCHARACTERIZED MFS-type transporter MJ1317|Methanocaldococcus jannaschii (strain

Query: 1 VLIPISLYV 9
++IPI+LY+
Sbjct: 259 IIIPIALYI 267




76|Sequence|376|385|SLYVSIEIVK

>sp|Y1547_METJA|PUTATIVE protein adenylyltransferase MJ1547|Methanocaldococcus jannaschii

Query: 2 LYVSIEIVK 10
LY+ +EI+K
Sbjct: 57 LYIKMEIIK 65




77|Sequence|381|390|IEIVKACQVY

>sp|SPCS_METMP|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IEIVKACQVY 10
+EI K C+ Y
Sbjct: 231 VEIAKICENY 240


>sp|SERK_STAMF|ATP-DEPENDENT L-serine kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 IEIVKACQVY 10
IEI K QVY
Sbjct: 219 IEIAKRNQVY 228


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 IEIVKAC 7
++IVKAC
Sbjct: 472 LQIVKAC 478


>sp|Y1416_METJA|UNCHARACTERIZED protein MJ1416|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IEIVKACQ 8
++ +KACQ
Sbjct: 277 VDFIKACQ 284


>sp|RL13_PICTO|LARGE ribosomal subunit protein uL13|Picrophilus torridus (strain ATCC

Query: 1 IEIVKACQVY 10
+E +K C VY
Sbjct: 88 MEALKRCMVY 97


>sp|VHUA_METJA|F420-NON-REDUCING hydrogenase vhu subunit A|Methanocaldococcus jannaschii (strain

Query: 1 IEIVKACQ 8
IE+V+AC+
Sbjct: 332 IELVEACE 339




78|Sequence|386|395|ACQVYFINQD

>sp|Y1575_ARCFU|UNCHARACTERIZED protein AF_1575|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ACQVYFINQD 10
C+V+FI +D
Sbjct: 191 GCEVWFIRED 200


>sp|AROE_SULAC|SHIKIMATE dehydrogenase (NADP(+))|Sulfolobus acidocaldarius (strain ATCC

Query: 1 ACQVYFINQ 9
C+VY IN+
Sbjct: 142 GCEVYVINR 150


>sp|CAS1_NANEQ|CRISPR-ASSOCIATED endonuclease Cas1|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 VYFINQD 10
+YFIN+D
Sbjct: 19 LYFINKD 25


>sp|CAS1_METTH|CRISPR-ASSOCIATED endonuclease Cas1|Methanothermobacter thermautotrophicus (strain

Query: 4 VYFINQD 10
+YFIN+D
Sbjct: 33 LYFINKD 39


>sp|TRUD_SULTO|PROBABLE tRNA pseudouridine synthase D|Sulfurisphaera tokodaii (strain DSM

Query: 5 YFINQD 10
YFIN+D
Sbjct: 7 YFINED 12


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 CQVYFINQD 10
CQ +F N D
Sbjct: 336 CQKFFWNSD 344


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CQVYFINQD 10
C +YF+ D
Sbjct: 107 CPIYFLTTD 115


>sp|CARA_METS5|CARBAMOYL phosphate synthase small chain|Metallosphaera sedula (strain ATCC

Query: 3 QVYFINQD 10
Q++F+N D
Sbjct: 318 QIWFVNPD 325


>sp|Y858_METJA|UNCHARACTERIZED protein MJ0858|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QVYFINQD 10
QV+FI++D
Sbjct: 59 QVFFIDKD 66




79|Sequence|391|400|FINQDMQLYD

>sp|UGNO_METMP|UDP-N-ACETYLGLUCOSAMINE 3-dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FINQDMQLYD 10
++NQD+ LYD
Sbjct: 246 YMNQDLTLYD 255


>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 FINQDMQLY 9
F+NQ QLY
Sbjct: 182 FLNQSPQLY 190


>sp|SYDND_METHJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FINQDMQLY 9
F+NQ QLY
Sbjct: 182 FLNQSPQLY 190


>sp|SYDND_ARCFU|ASPARTATE--TRNA(ASP/ASN) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FINQDMQLY 9
F+NQ QLY
Sbjct: 184 FLNQSPQLY 192


>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FINQDMQLY 9
F+NQ QLY
Sbjct: 182 FMNQSPQLY 190


>sp|DNAG_METB6|DNA primase DnaG|Methanoregula boonei (strain DSM 21154

Query: 1 FINQDM 6
F+NQDM
Sbjct: 341 FLNQDM 346


>sp|SYN_THEVO|ASPARAGINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FINQDMQLY 9
F+NQ Q Y
Sbjct: 179 FLNQSAQFY 187


>sp|HELS_THEAC|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FINQDMQLYD 10
F D QLYD
Sbjct: 16 FDGNDFQLYD 25




80|Sequence|396|405|MQLYDEETDS

>sp|ABLA_METMA|L-LYSINE 2,3-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QLYDEETD 9
+LYDEE D
Sbjct: 397 RLYDEEND 404


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 3 LYDEETDS 10
LY++ETD+
Sbjct: 118 LYEQETDA 125


>sp|MCRG_METFE|METHYL-COENZYME M reductase subunit gamma|Methanothermus fervidus

Query: 2 QLYDEET 8
Q+YDEET
Sbjct: 175 QVYDEET 181


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 QLYDEE 7
Q+YDEE
Sbjct: 211 QIYDEE 216


>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 1 MQLYDEETDS 10
M YD ETD+
Sbjct: 474 MAAYDPETDT 483


>sp|ENO_METVS|ENOLASE vannielii (strain ATCC 35089

Query: 2 QLYDEETDS 10
+ YDE+T+S
Sbjct: 249 EFYDEKTNS 257




81|Sequence|401|410|EETDSQLQCR

>sp|CDC6_METB6|ORC1-TYPE DNA replication protein|Methanoregula boonei (strain DSM 21154

Query: 2 ETDSQLQC 9
ETDS ++C
Sbjct: 302 ETDSMIEC 309


>sp|RS28_METMA|SMALL ribosomal subunit protein eS28|Methanosarcina mazei (strain ATCC

Query: 5 SQLQCR 10
SQ+QCR
Sbjct: 28 SQIQCR 33


>sp|CDC6_METMJ|ORC1-TYPE DNA replication protein|Methanoculleus marisnigri (strain ATCC

Query: 2 ETDSQLQC 9
ETDS ++C
Sbjct: 302 ETDSMVEC 309


>sp|CDC6_METHJ|ORC1-TYPE DNA replication protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ETDSQLQC 9
ETDS ++C
Sbjct: 302 ETDSMVEC 309




82|Sequence|406|415|QLQCRALNIT

>sp|RS8E_METBF|SMALL ribosomal subunit protein eS8|Methanosarcina barkeri (strain

Query: 2 LQCRALNIT 10
LQC NIT
Sbjct: 56 LQCDVANIT 64


>sp|RS28_METMA|SMALL ribosomal subunit protein eS28|Methanosarcina mazei (strain ATCC

Query: 1 QLQCRAL 7
Q+QCR L
Sbjct: 29 QIQCRVL 35


>sp|RS28_METAC|SMALL ribosomal subunit protein eS28|Methanosarcina acetivorans (strain

Query: 1 QLQCRAL 7
Q+QCR L
Sbjct: 32 QIQCRVL 38




83|Sequence|411|420|ALNITEDLGQ

>sp|COFC_METRM|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanobrevibacter ruminantium (strain ATCC

Query: 2 LNITEDLGQ 10
+N TEDLG+
Sbjct: 191 VNTTEDLGE 199


>sp|UPPS_METMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina mazei

Query: 3 NITEDLGQ 10
N +EDLGQ
Sbjct: 281 NKSEDLGQ 288


>sp|COFC_METS3|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LNITEDLGQ 10
+N TEDLG+
Sbjct: 180 VNTTEDLGE 188


>sp|SURE_METST|5'-NUCLEOTIDASE SurE|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ALNITEDLGQ 10
A N EDLGQ
Sbjct: 19 ARNSVEDLGQ 28


>sp|SYK_SACS2|LYSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LNITEDL 8
+N+TEDL
Sbjct: 276 MNLTEDL 282


>sp|DNLI_METTP|DNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ALNITEDLG 9
A N+T DLG
Sbjct: 191 AYNLTNDLG 199


>sp|COFC_META3|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LNITEDLGQ 10
+N EDLG+
Sbjct: 177 INTVEDLGE 185


>sp|COFC_METVS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LNITEDLGQ 10
+N EDLG+
Sbjct: 178 INTVEDLGE 186




84|Sequence|416|425|EDLGQIQYIF

>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 1 EDLGQIQYI 9
ED+G+++YI
Sbjct: 553 EDIGRMKYI 561


>sp|RL3_METS3|LARGE ribosomal subunit protein uL3|Methanobrevibacter smithii (strain

Query: 1 EDLGQIQYI 9
ED+ QI YI
Sbjct: 320 EDMPQINYI 328


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DLGQIQYI 9
DLG+++YI
Sbjct: 553 DLGKMKYI 560


>sp|Y1610_METJA|UNCHARACTERIZED glycosyl hydrolase MJ1610|Methanocaldococcus jannaschii (strain

Query: 2 DLGQIQYIF 10
D G+I+Y+F
Sbjct: 19 DYGEIEYLF 27


>sp|CAS3_METTH|CRISPR-ASSOCIATED nuclease/helicase Cas3|Methanothermobacter thermautotrophicus

Query: 2 DLGQIQYIF 10
DLG+I Y F
Sbjct: 67 DLGKIDYNF 75


>sp|DPCKG_SULAC|GTP-DEPENDENT dephospho-CoA kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EDLGQIQYI 9
E+ GQ +YI
Sbjct: 69 ENFGQFEYI 77




85|Sequence|421|430|IQYIFSDKTG

>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IQYIFSDKT 9
+QY++ DKT
Sbjct: 114 VQYVYKDKT 122


>sp|HTPX2_METAC|PROTEASE HtpX homolog 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IQYIFSDK 8
IQY +SDK
Sbjct: 53 IQYFYSDK 60


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IQYIFSDKT 9
+QY++ DKT
Sbjct: 106 VQYVYKDKT 114


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IQYIFSDKT 9
+QY++ D+T
Sbjct: 112 VQYVYKDRT 120


>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC

Query: 1 IQYIFSDKTG 10
++ IFSDK+G
Sbjct: 5 VEKIFSDKSG 14


>sp|SYH_ARCFU|HISTIDINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YIFSDKTG 10
Y+F DK+G
Sbjct: 63 YVFKDKSG 70


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 IQYIFSDKT 9
++Y++ DKT
Sbjct: 114 VEYVYKDKT 122


>sp|SYH_METKA|HISTIDINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 YIFSDKTG 10
Y+F DK G
Sbjct: 68 YVFKDKKG 75


>sp|HEM1_ARCFU|GLUTAMYL-TRNA reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IQYIFSDKTG 10
I+Y+F D G
Sbjct: 402 IKYVFGDGNG 411


>sp|MCRZ_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 QYIFSDKTG 10
+YI+ +KTG
Sbjct: 178 RYIYDEKTG 186


>sp|SYH_METPE|HISTIDINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 YIFSDKTG 10
Y+F DK G
Sbjct: 62 YVFQDKGG 69


>sp|SYH_METMJ|HISTIDINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 YIFSDKTG 10
Y+F DK G
Sbjct: 62 YVFEDKGG 69


>sp|SYH_METB6|HISTIDINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 YIFSDKTG 10
Y+F DK G
Sbjct: 62 YVFEDKGG 69


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 1 IQYIFSDKTG 10
++YI ++KTG
Sbjct: 546 VEYIVNNKTG 555


>sp|SYH_METHJ|HISTIDINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 YIFSDKTG 10
Y+F DK G
Sbjct: 62 YVFEDKGG 69


>sp|MCRG_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 QYIFSDKTG 10
+Y++ +KTG
Sbjct: 178 RYVYDEKTG 186


>sp|HTPX2_METMA|PROTEASE HtpX homolog 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QYIFSDK 8
QY +SDK
Sbjct: 54 QYFYSDK 60


>sp|SYH_SULTO|HISTIDINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YIFSDKTG 10
Y+F DK G
Sbjct: 64 YVFKDKAG 71




86|Sequence|426|435|SDKTGTLTEN

>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 SDKTGTLTEN 10
SDKTGTLT+N
Sbjct: 310 SDKTGTLTKN 319


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DKTGTLTE 9
DKTGTLTE
Sbjct: 389 DKTGTLTE 396


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 2 DKTGTLTE 9
DKTGTLT+
Sbjct: 424 DKTGTLTK 431


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DKTGTLTE 9
DKTG LTE
Sbjct: 251 DKTGCLTE 258


>sp|PURQ_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus abyssi (strain GE5 /

Query: 1 SDKTGTLTE 9
SD+ G LTE
Sbjct: 161 SDENGNLTE 169


>sp|KDPB_THEAC|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 DKTGTLT 8
DKTGT+T
Sbjct: 295 DKTGTIT 301


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 2 DKTGTLT 8
DKTGT+T
Sbjct: 298 DKTGTIT 304




87|Sequence|431|440|TLTENKMVFR

>sp|AMTAB_METJA|PROBABLE threonylcarbamoyladenosine tRNA

Query: 3 TENKMVFR 10
TEN+M++R
Sbjct: 63 TENRMIYR 70


>sp|AMPPA_METHJ|AMP phosphorylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 TLTENKMV 8
TLTEN++V
Sbjct: 71 TLTENEVV 78


>sp|SYC_METMA|CYSTEINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TLTENKMVFR 10
TLT NK F+
Sbjct: 7 TLTRNKETFK 16




88|Sequence|436|445|KMVFRRCTVS

>sp|TRPC_HALSA|INDOLE-3-GLYCEROL phosphate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 5 RRCTVS 10
RRCTVS
Sbjct: 26 RRCTVS 31


>sp|ACDE_METKA|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanopyrus

Query: 1 KMVFRRCTVS 10
KMVFRR S
Sbjct: 24 KMVFRRANDS 33




89|Sequence|441|450|RCTVSGVEYS

>sp|FPOC_METMA|F(420)H(2) dehydrogenase subunit C|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CTVSGVEY 9
C+VSGV+Y
Sbjct: 55 CSVSGVDY 62


>sp|ARDF_PYRFU|ARCHAEAL ribosome dimerization factor|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RCTVSGVE 8
RCT++GVE
Sbjct: 144 RCTLNGVE 151


>sp|PRIL_THEVO|DNA primase large subunit PriL|Thermoplasma volcanium (strain ATCC

Query: 4 VSGVEYS 10
+SGVEYS
Sbjct: 280 ISGVEYS 286


>sp|NADB_PYRFU|L-ASPARTATE oxidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CTVSGVEYS 10
C VSG+E S
Sbjct: 349 CIVSGIEVS 357


>sp|KCY_PYRIL|CYTIDYLATE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 CTVSGVEYS 10
CTV G +YS
Sbjct: 172 CTVLGFKYS 180


>sp|AROC_HALMD|CHORISMATE synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 CTVSGV 7
CTVSGV
Sbjct: 25 CTVSGV 30


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 CTVSGV 7
CT+SGV
Sbjct: 15 CTISGV 20


>sp|HIS6_METBF|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina barkeri

Query: 2 CTVSGVEY 9
C V GVE+
Sbjct: 20 CVVKGVEF 27


>sp|HIS6_METMA|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina mazei (strain

Query: 2 CTVSGVEY 9
C V GVE+
Sbjct: 20 CVVKGVEF 27


>sp|HIS6_METAC|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina acetivorans

Query: 2 CTVSGVEY 9
C V GVE+
Sbjct: 20 CVVKGVEF 27


>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 2 CTVSGVEY 9
CT+ +EY
Sbjct: 406 CTIEDIEY 413


>sp|HIS6_METAR|IMIDAZOLE glycerol phosphate synthase subunit|Methanocella arvoryzae

Query: 2 CTVSGVEY 9
C V GVE+
Sbjct: 20 CVVKGVEF 27


>sp|Y138_METJA|PUTATIVE glutamine amidotransferase-like protein MJ0138|Methanocaldococcus

Query: 2 CTVSGVE 8
C +SG+E
Sbjct: 361 CNISGIE 367


>sp|AROC_HALMA|CHORISMATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 CTVSGV 7
CTVSGV
Sbjct: 25 CTVSGV 30


>sp|THIL_HALSA|THIAMINE-MONOPHOSPHATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 CTVSGVEY 9
CT G EY
Sbjct: 96 CTAVGAEY 103


>sp|RIFK_METLZ|RIBOFLAVIN kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RCTVSGV 7
+CT+SG+
Sbjct: 174 KCTISGI 180




90|Sequence|446|455|GVEYSHDANA

>sp|Y090_METJA|UNCHARACTERIZED protease MJ0090|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GVEYSHDAN 9
G++Y+HD N
Sbjct: 52 GIKYAHDNN 60


>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 VEYSHDA 8
VE+SHDA
Sbjct: 441 VEFSHDA 447


>sp|KPRS_PYRFU|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVEYSH 6
G+EYSH
Sbjct: 174 GLEYSH 179


>sp|KPRS_PYRHO|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GVEYSH 6
G+EYSH
Sbjct: 177 GLEYSH 182


>sp|KPRS_THEKO|RIBOSE-PHOSPHATE pyrophosphokinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GVEYSH 6
G+EYSH
Sbjct: 175 GLEYSH 180


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 1 GVEYSHD 7
GVE+ HD
Sbjct: 764 GVEFDHD 770


>sp|ARGB_METB6|ACETYLGLUTAMATE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 GVEYSHDANA 10
GV+YSH N
Sbjct: 259 GVKYSHIING 268


>sp|KPRS_PYRAB|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus abyssi (strain GE5 /

Query: 1 GVEYSH 6
G+EYSH
Sbjct: 177 GLEYSH 182


>sp|SYFB_THEPD|PHENYLALANINE--TRNA ligase beta subunit|Thermofilum pendens (strain DSM 2475

Query: 1 GVEYSH 6
GVEY H
Sbjct: 179 GVEYGH 184




91|Sequence|451|460|HDANAQRLAR

>sp|DNAG_THEVO|DNA primase DnaG|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HDANAQRLA 9
+D+N QR+A
Sbjct: 370 YDSNGQRIA 378




92|Sequence|456|465|QRLARYQEAD

>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 LARYQEAD 10
L+RY+EAD
Sbjct: 283 LSRYKEAD 290


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 3 LARYQEAD 10
L RY+EAD
Sbjct: 283 LTRYKEAD 290


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 3 LARYQEAD 10
L RY+EAD
Sbjct: 283 LTRYKEAD 290


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 1 QRLARYQEA 9
Q+LAR++EA
Sbjct: 841 QKLARFEEA 849


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 LARYQEAD 10
L RY+EAD
Sbjct: 283 LTRYKEAD 290


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 3 LARYQEAD 10
L RY+EAD
Sbjct: 283 LTRYKEAD 290


>sp|PSB1_PYRFU|PROTEASOME subunit beta 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QRLARYQEAD 10
Q LARY EA+
Sbjct: 59 QMLARYLEAE 68


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 LARYQEAD 10
+ RY+EAD
Sbjct: 282 MTRYKEAD 289


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 LARYQEAD 10
+ RY+EAD
Sbjct: 282 MTRYKEAD 289


>sp|RS2_PYRAR|SMALL ribosomal subunit protein uS2|Pyrobaculum arsenaticum (strain DSM

Query: 3 LARYQEAD 10
L YQEAD
Sbjct: 112 LPHYQEAD 119




93|Sequence|461|470|YQEADSEEEE

>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YQEADSEEEE 10
Y+ DSE+EE
Sbjct: 271 YKSIDSEKEE 280




94|Sequence|466|475|SEEEEVVPRG

>sp|RL10_SACS2|LARGE ribosomal subunit protein uL10|Saccharolobus solfataricus (strain

Query: 1 SEEEEVVPRG 10
+EEE V+P G
Sbjct: 121 AEEEVVIPAG 130


>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 5 EVVPRG 10
EVVPRG
Sbjct: 346 EVVPRG 351


>sp|RL10_SULAC|LARGE ribosomal subunit protein uL10|Sulfolobus acidocaldarius (strain

Query: 1 SEEEEVVPRG 10
++EE VVP G
Sbjct: 120 ADEEVVVPAG 129


>sp|RL10_SACI6|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 SEEEEVVPRG 10
+EEE ++P G
Sbjct: 121 AEEEVIIPAG 130


>sp|RL10_SACI4|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 SEEEEVVPRG 10
+EEE ++P G
Sbjct: 121 AEEEVIIPAG 130


>sp|RL10_SACI7|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 SEEEEVVPRG 10
+EEE ++P G
Sbjct: 121 AEEEVIIPAG 130


>sp|RL10_SACI2|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 SEEEEVVPRG 10
+EEE ++P G
Sbjct: 121 AEEEVIIPAG 130


>sp|RL10_SACI1|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 SEEEEVVPRG 10
+EEE ++P G
Sbjct: 121 AEEEVIIPAG 130


>sp|RL10_SACI3|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 SEEEEVVPRG 10
+EEE ++P G
Sbjct: 121 AEEEVIIPAG 130


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain

Query: 3 EEEVVPR 9
EEE+VPR
Sbjct: 69 EEELVPR 75


>sp|DUT_AERPE|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Aeropyrum pernix

Query: 1 SEEEEVVPRG 10
EE++++P+G
Sbjct: 44 GEEDKIMPKG 53


>sp|RL3_METKA|LARGE ribosomal subunit protein uL3|Methanopyrus kandleri (strain AV19 /

Query: 4 EEVVPRG 10
EEV PRG
Sbjct: 279 EEVTPRG 285




95|Sequence|471|480|VVPRGGSVSQ

>sp|RCE1_METMP|CAAX prenyl protease 2|Methanococcus maripaludis (strain DSM 14266

Query: 2 VPRGGSVSQ 10
+P GGS+SQ
Sbjct: 105 IPFGGSISQ 113


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 1 VVPRGGSVSQ 10
V+ RGG VSQ
Sbjct: 238 VIRRGGKVSQ 247


>sp|PCCA_HALMT|PROPIONYL-COA carboxylase, biotin carboxylase and|Haloferax mediterranei (strain

Query: 1 VVPRGGSVSQ 10
V RGG+VSQ
Sbjct: 573 VAERGGTVSQ 582


>sp|CDPAS_SACI1|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 VPRGGSV 8
+PRGG V
Sbjct: 104 IPRGGRV 110


>sp|CDPAS_SACS2|CDP-ARCHAEOL synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VPRGGSV 8
+PRGG V
Sbjct: 104 IPRGGRV 110


>sp|CDPAS_SACI7|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 VPRGGSV 8
+PRGG V
Sbjct: 104 IPRGGRV 110


>sp|CDPAS_SACI6|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 VPRGGSV 8
+PRGG V
Sbjct: 104 IPRGGRV 110


>sp|CDPAS_SACI4|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VPRGGSV 8
+PRGG V
Sbjct: 104 IPRGGRV 110


>sp|CDPAS_SACI3|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 VPRGGSV 8
+PRGG V
Sbjct: 104 IPRGGRV 110


>sp|CDPAS_SACI2|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 VPRGGSV 8
+PRGG V
Sbjct: 104 IPRGGRV 110


>sp|THIL_NITMS|THIAMINE-MONOPHOSPHATE kinase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 VVPRGGSVSQ 10
+VPR GS S+
Sbjct: 135 IVPRNGSESK 144


>sp|FAE_METBF|5,6,7,8-TETRAHYDROMETHANOPTERIN hydro-lyase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PRGGSV 8
PRGGSV
Sbjct: 40 PRGGSV 45


>sp|GLYA_PYRCJ|SERINE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VVPRGGSVS 9
+VP GGSV+
Sbjct: 104 LVPEGGSVA 112


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VPRGGSV 8
VPRGG +
Sbjct: 626 VPRGGDI 632


>sp|COBQ_METMJ|PROBABLE cobyric acid synthase|Methanoculleus marisnigri (strain ATCC

Query: 3 PRGGSVSQ 10
P+G SVSQ
Sbjct: 79 PKGDSVSQ 86


>sp|GLYA_PYRIL|SERINE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VVPRGGSVS 9
+VP GG+V+
Sbjct: 104 LVPEGGTVA 112




96|Sequence|476|485|GSVSQRGSIG

>sp|DGGGP_HALWD|DIGERANYLGERANYLGLYCERYL phosphate synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GSVSQRGSI 9
G++S+RG+I
Sbjct: 83 GAISERGAI 91


>sp|RL30_META3|LARGE ribosomal subunit protein uL30|Methanococcus aeolicus (strain

Query: 1 GSVSQRGSIG 10
GSV RGSI
Sbjct: 10 GSVGVRGSIA 19


>sp|HBCAL_NITMS|4-HYDROXYBUTYRATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GSVSQRGSIG 10
G+ +RGS+G
Sbjct: 16 GASDKRGSVG 25




97|Sequence|481|490|RGSIGSHQSV

>sp|CDC6B_HALMA|ORC1-TYPE DNA replication protein 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 GSIGSHQSV 10
G G+HQS+
Sbjct: 390 GEFGAHQSI 398


>sp|PURP_ARCFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Archaeoglobus fulgidus (strain ATCC

Query: 2 GSIGSHQSV 10
G+IGSH ++
Sbjct: 23 GTIGSHSAL 31


>sp|Y661_METTH|PUTATIVE ammonium transporter MTH_661|Methanothermobacter

Query: 2 GSIGSHQ 8
G IGSHQ
Sbjct: 72 GIIGSHQ 78




98|Sequence|486|495|SHQSVRVVHR

>sp|SUCC_METTH|SUCCINATE--COA ligase [ADP-forming] subunit beta|Methanothermobacter

Query: 1 SHQSVRVV 8
SH SVRVV
Sbjct: 286 SHPSVRVV 293


>sp|FOLD_METHJ|BIFUNCTIONAL protein FolD|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SHQSVRVVHR 10
SH VR+ HR
Sbjct: 40 SHMYVRMKHR 49


>sp|TBP_HALMA|TATA-BOX-BINDING protein|Haloarcula marismortui (strain ATCC 43049

Query: 2 HQSVRVV 8
HQS+R+V
Sbjct: 76 HQSLRIV 82


>sp|Y017_METJA|UNCHARACTERIZED protein MJ0017|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SHQSVRVVH 9
SH+SVR+ +
Sbjct: 55 SHESVRIYY 63


>sp|Y1466_METJA|UNCHARACTERIZED protein MJ1466|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SHQSVRVVH 9
SH+SVR+ +
Sbjct: 55 SHESVRIYY 63


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 1 SHQSVRVVH 9
SH S++++H
Sbjct: 8 SHSSLQILH 16


>sp|PURP_SULAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfolobus acidocaldarius (strain

Query: 1 SHQSVRVVH 9
SH S++++H
Sbjct: 9 SHSSLQILH 17


>sp|PURP_METS5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Metallosphaera sedula (strain ATCC

Query: 1 SHQSVRVVH 9
SH S++++H
Sbjct: 8 SHSSLQILH 16


>sp|Y13A_METJA|UNCHARACTERIZED protein MJ0139.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SHQSVRVVH 9
SH+SVR+ +
Sbjct: 55 SHESVRIYY 63




99|Sequence|491|500|RVVHRTQSTK

>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 RVVHRTQSTK 10
R VH T STK
Sbjct: 65 RAVHHTASTK 74




100|Sequence|496|505|TQSTKSHRRT

***** No hits found ******


101|Sequence|501|510|SHRRTGSRAE

>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 HRRTGSRA 9
HRRTG +A
Sbjct: 450 HRRTGDKA 457


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 HRRTGSR 8
HR+TG R
Sbjct: 34 HRKTGKR 40


>sp|Y119_METJA|UNCHARACTERIZED protein MJ0119|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SHRRTGSRAE 10
SHR TG + E
Sbjct: 153 SHRITGEKIE 162


>sp|NPD_AERPE|NAD-DEPENDENT protein deacylase|Aeropyrum pernix (strain ATCC 700893

Query: 2 HRRTGSR 8
HRR GSR
Sbjct: 106 HRRAGSR 112


>sp|RL3_PYRCJ|LARGE ribosomal subunit protein uL3|Pyrobaculum calidifontis (strain DSM

Query: 2 HRRTGS 7
HRRTG+
Sbjct: 234 HRRTGT 239


>sp|RL3_PYRIL|LARGE ribosomal subunit protein uL3|Pyrobaculum islandicum (strain DSM

Query: 2 HRRTGS 7
HRRTG+
Sbjct: 238 HRRTGT 243


>sp|RL3_PYRAR|LARGE ribosomal subunit protein uL3|Pyrobaculum arsenaticum (strain DSM

Query: 2 HRRTGS 7
HRRTG+
Sbjct: 234 HRRTGT 239


>sp|RL3_PYRAE|LARGE ribosomal subunit protein uL3|Pyrobaculum aerophilum (strain ATCC

Query: 2 HRRTGS 7
HRRTG+
Sbjct: 234 HRRTGT 239


>sp|RL3_PYRNV|LARGE ribosomal subunit protein uL3|Pyrobaculum neutrophilum (strain DSM

Query: 2 HRRTGS 7
HRRTG+
Sbjct: 234 HRRTGT 239




102|Sequence|506|515|GSRAEAKRAS

***** No hits found ******


103|Sequence|511|520|AKRASMLSKH

>sp|RL5_META3|LARGE ribosomal subunit protein uL5|Methanococcus aeolicus (strain ATCC

Query: 1 AKRASMLSKH 10
AKRA++ +KH
Sbjct: 150 AKRANIPAKH 159




104|Sequence|516|525|MLSKHTAFSS

>sp|MPGS_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 MLSKHTAFSS 10
++S+HTAF +
Sbjct: 232 LISEHTAFET 241


>sp|MPGS_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MLSKHTAFSS 10
++S+HTAF +
Sbjct: 232 LVSEHTAFET 241




105|Sequence|521|530|TAFSSPMEKD

>sp|ARLY_META3|ARGININOSUCCINATE lyase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 AFSSPMEKD 10
+++SPME+D
Sbjct: 176 SYASPMERD 184


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 FSSPME 8
FSSPME
Sbjct: 949 FSSPME 954


>sp|CBID_META3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 TAFSSPMEKD 10
TA+SSP D
Sbjct: 301 TAYSSPFIND 310




106|Sequence|526|535|PMEKDITPDP

>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 1 PMEKDITP 8
PM+K ITP
Sbjct: 128 PMDKPITP 135


>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 3 EKDITPD 9
EK++TPD
Sbjct: 377 EKNLTPD 383


>sp|Y772_ARCFU|UNCHARACTERIZED protein AF_0772|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PMEKDITPD 9
P+E ITPD
Sbjct: 2 PVEGFITPD 10


>sp|Y1714_PYRHO|UNCHARACTERIZED lipoprotein PH1714|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 KDITPD 9
KD+TPD
Sbjct: 333 KDMTPD 338


>sp|Y452_PYRAB|UNCHARACTERIZED lipoprotein PYRAB04520|Pyrococcus abyssi (strain GE5 /

Query: 4 KDITPD 9
KD+TPD
Sbjct: 332 KDMTPD 337


>sp|SYFA_METMA|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PMEKDITPDP 10
P DITP P
Sbjct: 221 PYRLDITPKP 230




107|Sequence|531|540|ITPDPKLLEK

>sp|RL19E_AERPE|LARGE ribosomal subunit protein eL19|Aeropyrum pernix (strain ATCC

Query: 1 ITPDPKLLEK 10
I+PDP+L E+
Sbjct: 23 ISPDPELREE 32


>sp|HIS5_METTH|IMIDAZOLE glycerol phosphate synthase subunit|Methanothermobacter

Query: 1 ITPDPKLLE 9
+T DP++LE
Sbjct: 28 VTSDPQILE 36


>sp|PRIL_METKA|DNA primase large subunit PriL|Methanopyrus kandleri (strain AV19 /

Query: 3 PDPKLLE 9
PDP LLE
Sbjct: 224 PDPNLLE 230


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TPDPKL 7
TPDPKL
Sbjct: 33 TPDPKL 38


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 ITPDPKLLEK 10
+TPD K++EK
Sbjct: 405 LTPDFKIVEK 414


>sp|RPIA_METB6|RIBOSE-5-PHOSPHATE isomerase A|Methanoregula boonei (strain DSM 21154

Query: 3 PDPKLLE 9
PDP LLE
Sbjct: 189 PDPALLE 195


>sp|DADD_META3|5'-DEOXYADENOSINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ITPDPKLLE 9
I P PKL+E
Sbjct: 278 IAPIPKLME 286


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 1 ITPDPKL 7
I+PDP+L
Sbjct: 329 ISPDPRL 335


>sp|EF1A_METJA|ELONGATION factor 1-alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DPKLLEK 10
DP+LLEK
Sbjct: 35 DPQLLEK 41


>sp|DADD_METKA|5'-DEOXYADENOSINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 ITPDPKLLEK 10
I+P P++LE+
Sbjct: 282 ISPVPEMLER 291


>sp|IF2A_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 1 ITPDPKLLEK 10
I DPKLL K
Sbjct: 229 IGTDPKLLSK 238


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 3 PDPKLLEK 10
PDPK L+K
Sbjct: 378 PDPKKLQK 385


>sp|PSTB1_HALSA|PHOSPHATE import ATP-binding protein PstB|Halobacterium salinarum (strain

Query: 1 ITPDPKLL 8
I PDP++L
Sbjct: 191 IAPDPEVL 198


>sp|RL37A_ARCFU|LARGE ribosomal subunit protein eL43|Archaeoglobus fulgidus (strain

Query: 1 ITPDPKLLEK 10
+TP K++EK
Sbjct: 71 VTPGGKIVEK 80


>sp|PRIS_PICTO|DNA primase small subunit PriS|Picrophilus torridus (strain ATCC

Query: 1 ITPDPKLLEK 10
I PD K +EK
Sbjct: 72 IKPDEKRMEK 81


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 ITPDPKLLEK 10
+TPD ++EK
Sbjct: 263 VTPDEYIVEK 272


>sp|COFG_METTH|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 TPDPKLLE 9
TP+P LLE
Sbjct: 28 TPEPPLLE 35


>sp|IF2B_STAMF|TRANSLATION initiation factor 2 subunit|Staphylothermus marinus (strain ATCC

Query: 1 ITPDPKLLEK 10
I DPK+L++
Sbjct: 57 INRDPKILQR 66




108|Sequence|536|545|KLLEKVSECD

>sp|RFCS_METST|REPLICATION factor C small subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KLLEKVSECD 10
KL+E +SECD
Sbjct: 285 KLMEYMSECD 294


>sp|GYAR_PYRFU|GLYOXYLATE reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KLLEKVSECD 10
KLLEKV + D
Sbjct: 38 KLLEKVKDVD 47


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 KLLEKVSECD 10
+LLE+V E D
Sbjct: 616 RLLERVGEAD 625


>sp|HPRT_METZD|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 1 KLLEKVSEC 9
LLE++SEC
Sbjct: 37 SLLEEISEC 45


>sp|FTR_METBU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KLLEKVSEC 9
+LLE+V +C
Sbjct: 87 QLLERVGQC 95


>sp|RL13_ARCFU|LARGE ribosomal subunit protein uL13|Archaeoglobus fulgidus (strain ATCC

Query: 2 LLEKVSECD 10
LLEKVS+ D
Sbjct: 131 LLEKVSKTD 139


>sp|MRE11_METKA|DNA double-strand break repair protein|Methanopyrus kandleri (strain

Query: 1 KLLEKVSEC 9
+L+E+V EC
Sbjct: 31 RLMEEVREC 39


>sp|RS8_NITMS|SMALL ribosomal subunit protein uS8|Nitrosopumilus maritimus (strain

Query: 1 KLLEKVSEC 9
KLL K+++C
Sbjct: 64 KLLAKITKC 72


>sp|FTR_METMA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KLLEKVSEC 9
+LLE++ +C
Sbjct: 87 QLLERIGQC 95


>sp|CYAS_METBU|CYSTEATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KLLEKVSE 8
K+LEKV+E
Sbjct: 403 KILEKVAE 410


>sp|Y1475_METJA|UNCHARACTERIZED protein MJ1475|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLEKVSECD 10
L+EK+ EC+
Sbjct: 12 LIEKIKECE 20


>sp|FTR_METBF|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KLLEKVSEC 9
+LLE++ +C
Sbjct: 87 QLLERIGQC 95


>sp|FTR_METAC|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KLLEKVSEC 9
+LLE++ +C
Sbjct: 87 QLLERIGQC 95


>sp|GYAR_KORCO|GLYOXYLATE reductase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 LLEKVSECD 10
++E+V +CD
Sbjct: 39 IIERVKDCD 47


>sp|RFCS_METS3|REPLICATION factor C small subunit|Methanobrevibacter smithii (strain ATCC

Query: 2 LLEKVSECD 10
L+E +++CD
Sbjct: 286 LIEAIADCD 294


>sp|Y865_METJA|PUTATIVE methylthiotransferase MJ0865|Methanocaldococcus jannaschii (strain

Query: 2 LLEKVSEC 9
LLEKVSE
Sbjct: 241 LLEKVSEV 248


>sp|ISF3_ARCFU|IRON-SULFUR flavoprotein AF_1896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KLLEKVSECD 10
K+LEK+ E D
Sbjct: 65 KVLEKMQEAD 74


>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 3 LEKVSECD 10
LEKVSE D
Sbjct: 135 LEKVSEYD 142


>sp|HIS51_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 2 LLEKVSEC 9
LLEK EC
Sbjct: 88 LLEKSEEC 95


>sp|EF1B_NANEQ|ELONGATION factor 1-beta|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 KLLEKVSEC 9
KLLEKV E
Sbjct: 14 KLLEKVKEV 22


>sp|Y575_METJA|UNCHARACTERIZED protein MJ0575|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLEKVSECD 10
LLEK+ E D
Sbjct: 52 LLEKIKEAD 60


>sp|Y1011_METJA|UNCHARACTERIZED protein MJ1011|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLEKVSEC 9
+LEK+ EC
Sbjct: 89 MLEKIEEC 96




109|Sequence|541|550|VSECDKSLAV

***** No hits found ******


110|Sequence|546|555|KSLAVARHQE

>sp|Y1154_METJA|UNCHARACTERIZED protein MJ1154|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KSLAVARHQ 9
+SL VARHQ
Sbjct: 192 ESLLVARHQ 200


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 2 SLAVARHQE 10
+LAVARH +
Sbjct: 115 TLAVARHHQ 123




111|Sequence|551|560|ARHQEHLLAH

>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RHQEHLL 8
RHQEH
Sbjct: 191 RHQEHFF 197


>sp|GGR_METJA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RHQEHLLAH 10
+H E+L++H
Sbjct: 330 KHYEYLMSH 338


>sp|G1PDH_SULTO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ARHQEHLLAH 10
A EHL AH
Sbjct: 245 ASGSEHLFAH 254


>sp|G1PDH_SACS2|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus solfataricus (strain ATCC

Query: 1 ARHQEHLLAH 10
A EHL AH
Sbjct: 246 ASGSEHLFAH 255


>sp|G1PDH_SACI7|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 ARHQEHLLAH 10
A EHL AH
Sbjct: 246 ASGSEHLFAH 255


>sp|G1PDH_SACI6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ARHQEHLLAH 10
A EHL AH
Sbjct: 246 ASGSEHLFAH 255


>sp|G1PDH_SACI4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ARHQEHLLAH 10
A EHL AH
Sbjct: 246 ASGSEHLFAH 255


>sp|G1PDH_SACI3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.16.27)

Query: 1 ARHQEHLLAH 10
A EHL AH
Sbjct: 246 ASGSEHLFAH 255


>sp|G1PDH_SACI2|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 ARHQEHLLAH 10
A EHL AH
Sbjct: 246 ASGSEHLFAH 255


>sp|G1PDH_SACI1|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 ARHQEHLLAH 10
A EHL AH
Sbjct: 246 ASGSEHLFAH 255


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 ARHQEHLLAH 10
A H HLL H
Sbjct: 117 AAHGRHLLDH 126


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 ARHQEHLLAH 10
A H HLL H
Sbjct: 118 AAHGRHLLDH 127


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 ARHQEHLLAH 10
A H HLL H
Sbjct: 117 AAHGRHLLDH 126


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 ARHQEHLLAH 10
A H HLL H
Sbjct: 118 AAHGRHLLDH 127


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 ARHQEHLLAH 10
A H HLL H
Sbjct: 118 AAHGRHLLDH 127


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 1 ARHQEHLLAH 10
A H HLL H
Sbjct: 118 AAHGRHLLDH 127


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 ARHQEHLLAH 10
A H HLL H
Sbjct: 118 AAHGRHLLDH 127


>sp|G1PDH_METS5|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Metallosphaera sedula (strain ATCC 51363

Query: 1 ARHQEHLLAH 10
A EHL AH
Sbjct: 246 ASGSEHLFAH 255


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 3 HQEHLLAH 10
H +H+L+H
Sbjct: 334 HVQHILSH 341


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus (strain

Query: 3 HQEHLLAH 10
H +H+L+H
Sbjct: 332 HVQHILSH 339


>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 2 RHQEHLLAH 10
RH E LAH
Sbjct: 295 RHFERALAH 303


>sp|G1PDH_SULAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Sulfolobus acidocaldarius (strain ATCC

Query: 1 ARHQEHLLAH 10
A EHL AH
Sbjct: 246 ASGSEHLFAH 255


>sp|G1PDH_AERPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Aeropyrum pernix (strain ATCC 700893

Query: 1 ARHQEHLLAH 10
A EHL AH
Sbjct: 248 ASGSEHLFAH 257




112|Sequence|556|565|HLLAHLSPEL

>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 1 HLLAHLSPEL 10
H++A+L P+L
Sbjct: 531 HIMAYLEPDL 540


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 2 LLAHLSPE 9
L+AH SPE
Sbjct: 140 LIAHSSPE 147


>sp|NADK_ARCFU|NAD kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LLAHLSPE 9
LL H SPE
Sbjct: 75 LLTHASPE 82


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 AHLSPEL 10
AHLSP L
Sbjct: 81 AHLSPNL 87


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HLLAHLSPEL 10
HL++ L+P+L
Sbjct: 5 HLVSELNPKL 14


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HLLAHLSPE 9
H + HL+PE
Sbjct: 409 HPVVHLAPE 417


>sp|RL3_METH6|LARGE ribosomal subunit protein uL3|Methanothrix harundinacea (strain

Query: 2 LLAHLSPEL 10
L+AH +P+L
Sbjct: 140 LIAHTNPKL 148


>sp|IF2B_METMJ|TRANSLATION initiation factor 2 subunit|Methanoculleus marisnigri (strain

Query: 1 HLLAHLSPEL 10
HL+ HL EL
Sbjct: 58 HLMKHLLGEL 67


>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 HLLAHLSPE 9
H + HL+PE
Sbjct: 409 HPVVHLAPE 417


>sp|CDC6_METHJ|ORC1-TYPE DNA replication protein|Methanospirillum hungatei JF-1 (strain

Query: 1 HLLAHLSPEL 10
H+L H P++
Sbjct: 35 HILPHRKPQI 44




113|Sequence|561|570|LSPELSDVFD

>sp|SYR_METB6|ARGININE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 LSPELSDVFD 10
+SPE S VFD
Sbjct: 423 ISPEKSTVFD 432


>sp|Y090_METJA|UNCHARACTERIZED protease MJ0090|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PELSDVFD 10
PEL +VFD
Sbjct: 236 PELMEVFD 243


>sp|RL3_METBU|LARGE ribosomal subunit protein uL3|Methanococcoides burtonii (strain DSM

Query: 4 ELSDVFD 10
E+SDVFD
Sbjct: 188 EISDVFD 194


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LSPELSDVFD 10
+SPE S VFD
Sbjct: 423 VSPEKSTVFD 432


>sp|SYR_METBU|ARGININE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LSPELSDVFD 10
+SPE S VFD
Sbjct: 423 VSPEKSTVFD 432


>sp|SECY_ARCFU|PROTEIN translocase subunit SecY|Archaeoglobus fulgidus (strain ATCC

Query: 1 LSPELSDVF 9
LSPE D+F
Sbjct: 52 LSPESIDIF 60


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 2 SPELSDVFD 10
SP+++DV D
Sbjct: 338 SPKINDVMD 346


>sp|Y872_METJA|UNCHARACTERIZED lipoprotein MJ0872|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SPELSDVFD 10
SP+L ++FD
Sbjct: 138 SPKLKELFD 146


>sp|PYRDB_THEAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermoplasma acidophilum

Query: 1 LSPELSDVFD 10
LSP +SD+ +
Sbjct: 164 LSPNVSDIIE 173


>sp|TRPD_THEAC|ANTHRANILATE phosphoribosyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 2 SPELSDVF 9
SPE SD F
Sbjct: 25 SPECSDAF 32


>sp|DHOM_SULTO|HOMOSERINE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SPELSDV 8
SPEL+DV
Sbjct: 24 SPELNDV 30


>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain

Query: 2 SPELSDVFD 10
+P LSD+F+
Sbjct: 58 APNLSDIFN 66


>sp|NADE_THEAC|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 LSDVFD 10
LSDVFD
Sbjct: 204 LSDVFD 209




114|Sequence|566|575|SDVFDFFIAL

>sp|RL1_METTP|LARGE ribosomal subunit protein uL1|Methanothrix thermoacetophila (strain

Query: 1 SDVFDFFIA 9
+D +DFFIA
Sbjct: 99 ADEYDFFIA 107


>sp|GCH3_PYRIL|GTP cyclohydrolase III|Pyrobaculum islandicum (strain DSM 4184

Query: 4 FDFFIAL 10
+DFFIAL
Sbjct: 54 YDFFIAL 60


>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SDVFDFFIA 9
SD+++FFI+
Sbjct: 585 SDIYNFFIS 593


>sp|GCH3_PYRNV|GTP cyclohydrolase III|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 FDFFIAL 10
+DF+IAL
Sbjct: 54 YDFYIAL 60


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 1 SDVFDFF 7
SDV DFF
Sbjct: 443 SDVSDFF 449


>sp|GATD_THEPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermofilum pendens (strain DSM 2475

Query: 2 DVFDFFI 8
D+FDF++
Sbjct: 329 DIFDFYL 335


>sp|Y764_METJA|UNCHARACTERIZED protein MJ0764|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SDVFDFFI 8
SD+ +FF+
Sbjct: 90 SDILEFFV 97


>sp|Y068_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 2 DVFDFF 7
DVF+FF
Sbjct: 217 DVFEFF 222


>sp|FLAE_METJA|PUTATIVE flagella-related protein E|Methanocaldococcus jannaschii (strain

Query: 1 SDVFDFFIAL 10
SD+ DF+ L
Sbjct: 54 SDILDFYYML 63


>sp|CSG2_HALHT|CELL surface glycoprotein 2|Haloarcula hispanica (strain ATCC 33960

Query: 1 SDVFDFFIA 9
SDV D FIA
Sbjct: 526 SDVTDAFIA 534


>sp|Y626_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB06260|Pyrococcus abyssi (strain GE5 /

Query: 2 DVFDFFIAL 10
++F+FFI L
Sbjct: 159 EIFNFFIHL 167




115|Sequence|571|580|FFIALTICNT

>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 IALTICN 9
IALTIC+
Sbjct: 206 IALTICS 212


>sp|TRMI_PYRAB|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 1 FFIALTICN 9
FF+A T C+
Sbjct: 189 FFVAYTPCS 197


>sp|DGGGP_METLZ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanocorpusculum labreanum (strain ATCC

Query: 1 FFIALTICNT 10
FFI L IC
Sbjct: 41 FFIVLVICGA 50


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FFIALTICN 9
FF ALT+ N
Sbjct: 107 FFAALTVKN 115




116|Sequence|576|585|TICNTVVVTS

>sp|HPRT_METBU|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 2 ICNTVVVTS 10
ICN +VV S
Sbjct: 144 ICNVIVVIS 152


>sp|DNLI_METLZ|DNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 ICNTVVVTS 10
ICNT+ TS
Sbjct: 9 ICNTIEGTS 17


>sp|FTSZ2_ARCFU|CELL division protein FtsZ 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ICNTVVV 8
+C+TVVV
Sbjct: 174 VCDTVVV 180




117|Sequence|581|590|VVVTSPDQPR

>sp|GLMD_THEKO|GLUCOSAMINE-6-PHOSPHATE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 SPDQPR 10
+PDQPR
Sbjct: 313 NPDQPR 318


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 VVVTSPDQPR 10
V+ ++PD+PR
Sbjct: 81 VLASAPDEPR 90


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VVVTSPDQP 9
V +T PD+P
Sbjct: 334 VEITEPDEP 342


>sp|Y1682_PYRHO|UPF0145 protein PH1682|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VVVTSPDQP 9
+VVT+P+ P
Sbjct: 11 IVVTTPEIP 19


>sp|GLK_PYRCJ|GLUCOKINASE calidifontis (strain DSM 21063

Query: 1 VVVTSPDQP 9
VVV SP+ P
Sbjct: 67 VVVNSPNSP 75


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 VVVTSPDQPR 10
V+ +PD+PR
Sbjct: 78 VLAQAPDEPR 87


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVVTSPDQPR 10
V+ +PD+PR
Sbjct: 78 VLAQAPDEPR 87


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 3 VTSPDQ 8
+TSPDQ
Sbjct: 383 ITSPDQ 388


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 6 PDQPR 10
PDQPR
Sbjct: 276 PDQPR 280


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VVTSPDQP 9
++ SPD P
Sbjct: 356 IIASPDNP 363


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus fulgidus

Query: 1 VVVTSPDQP 9
V + SPD+P
Sbjct: 223 VCIVSPDRP 231


>sp|EF2_METS3|ELONGATION factor 2|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VVVTSPDQP 9
++ TSPD P
Sbjct: 283 MITTSPDGP 291


>sp|THSA_THEK8|CHAPERONIN subunit alpha|Thermococcus sp. (strain KS-8)

Query: 3 VTSPDQ 8
+TSPDQ
Sbjct: 259 ITSPDQ 264


>sp|THSA_THEKO|CHAPERONIN subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VTSPDQ 8
+TSPDQ
Sbjct: 259 ITSPDQ 264


>sp|THSA_THEK1|CHAPERONIN subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 3 VTSPDQ 8
+TSPDQ
Sbjct: 259 ITSPDQ 264




118|Sequence|586|595|PDQPRTKVRV

>sp|MCRC_METTM|METHYL-COENZYME M reductase I operon|Methanothermobacter marburgensis (strain ATCC

Query: 1 PDQPRTK 7
PD+P+TK
Sbjct: 157 PDEPKTK 163


>sp|MCRC_METTH|METHYL-COENZYME M reductase I operon|Methanothermobacter thermautotrophicus (strain

Query: 1 PDQPRTK 7
PD+P+TK
Sbjct: 157 PDEPKTK 163


>sp|SPEE_PYRAE|POLYAMINE aminopropyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DQPRTKVRV 10
D PR++VR+
Sbjct: 133 DDPRSEVRI 141


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 1 PDQPRTKV 8
PD PR +V
Sbjct: 743 PDNPRAEV 750


>sp|GATE_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PDQPRTKVR 9
P+ P TK+R
Sbjct: 457 PENPETKLR 465


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 PDQPRT 6
PD+PRT
Sbjct: 86 PDEPRT 91


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 1 PDQPR 5
PDQPR
Sbjct: 276 PDQPR 280


>sp|PRIL_PYRAB|DNA primase large subunit PriL|Pyrococcus abyssi (strain GE5 /

Query: 1 PDQPRTKVRV 10
P+ PR VRV
Sbjct: 262 PNPPRRNVRV 271


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 1 PDQPRTKV 8
PD PR++V
Sbjct: 130 PDAPRSRV 137




119|Sequence|591|600|TKVRVRFELK

>sp|THII_METS3|PROBABLE tRNA sulfurtransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 TKVRVRFELK 10
+KVR RFE K
Sbjct: 18 SKVRARFERK 27


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 TKVRVRFELK 10
T +R+R ELK
Sbjct: 275 TNIRLRDELK 284




120|Sequence|596|605|RFELKSPVKT

>sp|GLNA_HALSA|GLUTAMINE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RFELKSP 7
RFE++SP
Sbjct: 341 RFEIRSP 347


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 1 RFELKSPVK 9
RF++K+PV+
Sbjct: 222 RFDIKAPVR 230


>sp|MVK_SACS2|MEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FELKSPVK 9
FE+K PVK
Sbjct: 84 FEMKKPVK 91


>sp|PGK_AERPE|PHOSPHOGLYCERATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RFELKSPV 8
RF+L SPV
Sbjct: 26 RFDLNSPV 33


>sp|RNP3_METBF|RIBONUCLEASE P protein component 3|Methanosarcina barkeri (strain Fusaro /

Query: 2 FELKSPVKT 10
F+L+SP++T
Sbjct: 182 FDLRSPMET 190


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus

Query: 3 ELKSPVK 9
ELK+PVK
Sbjct: 8 ELKNPVK 14


>sp|DCD_HALLT|DCTP deaminase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 ELKSPVK 9
ELKSP K
Sbjct: 157 ELKSPAK 163




121|Sequence|601|610|SPVKTIEDFL

>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PVKTIEDFL 10
P KTIED L
Sbjct: 604 PAKTIEDVL 612


>sp|GLYA_NITMS|SERINE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 PVKTIEDFL 10
PVK + DFL
Sbjct: 190 PVKELSDFL 198


>sp|MOAA_AERPE|PROBABLE GTP 3',8-cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SPVKTIEDF 9
SPV ++ED+
Sbjct: 45 SPVLSVEDY 53


>sp|RFRNP_IGNH4|RNA-FREE ribonuclease P|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 VKTIEDFL 10
VKTIE++L
Sbjct: 190 VKTIEEYL 197


>sp|HIS6_METVS|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus vannielii

Query: 3 VKTIEDF 9
+KT+EDF
Sbjct: 83 IKTVEDF 89


>sp|FAEHP_METAR|BIFUNCTIONAL enzyme Fae/Hps|Methanocella arvoryzae (strain DSM 22066

Query: 1 SPVKTIEDFL 10
+P+ TIE F+
Sbjct: 260 APIATIEKFI 269


>sp|THPR_AERPE|RNA 2',3'-cyclic phosphodiesterase|Aeropyrum pernix (strain ATCC

Query: 2 PVKTIED 8
P+KT+ED
Sbjct: 18 PMKTVED 24


>sp|ENO_METM7|ENOLASE maripaludis (strain C7 /

Query: 2 PVKTIEDFL 10
PVKTI++ L
Sbjct: 215 PVKTIDEAL 223


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 1 SPVKTIEDFL 10
SP++TIE L
Sbjct: 169 SPIETIETVL 178


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 2 PVKTIEDFL 10
PV+TIE+ L
Sbjct: 766 PVETIEEVL 774


>sp|ENO_METM5|ENOLASE maripaludis (strain C5 /

Query: 2 PVKTIEDFL 10
PVKTI++ L
Sbjct: 215 PVKTIDEAL 223


>sp|ENO_METMP|ENOLASE maripaludis (strain DSM 14266

Query: 2 PVKTIEDFL 10
PVKTI++ L
Sbjct: 215 PVKTIDEAL 223


>sp|DNAG_DESA1|DNA primase DnaG|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 PVKTIEDF 9
PVK IED
Sbjct: 313 PVKLIEDI 320




122|Sequence|606|615|IEDFLRRFTP

>sp|NADB_PYRFU|L-ASPARTATE oxidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IEDFLRRF 8
IEDF RRF
Sbjct: 272 IEDFKRRF 279


>sp|DHYS_SACS2|PROBABLE deoxyhypusine synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 IEDFLRRFTP 10
IED +R+F P
Sbjct: 140 IEDVVRKFLP 149


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IEDFLRRF 8
+EDFL++F
Sbjct: 337 VEDFLKKF 344


>sp|MTAD_HALMA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloarcula marismortui (strain ATCC 43049

Query: 2 EDFLRRFTP 10
E++LR F P
Sbjct: 191 EEYLREFVP 199


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 IEDFLRRFTP 10
++DF+ +F+P
Sbjct: 334 VKDFVEKFSP 343


>sp|NADB_SULTO|L-ASPARTATE oxidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IEDFLRRF 8
IEDF R+F
Sbjct: 281 IEDFERKF 288


>sp|SYC_ARCFU|CYSTEINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IEDFLRRF 8
+ED++RRF
Sbjct: 349 VEDYIRRF 356


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 3 DFLRRFTP 10
DFLR TP
Sbjct: 226 DFLREVTP 233


>sp|NADB_SACS2|L-ASPARTATE oxidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IEDFLRRF 8
IEDF R+F
Sbjct: 280 IEDFDRKF 287


>sp|RS8_SACI7|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 1 IEDFLRRFTP 10
+ D++RR+ P
Sbjct: 89 LPDYIRRYLP 98


>sp|RS8_SACI6|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 1 IEDFLRRFTP 10
+ D++RR+ P
Sbjct: 89 LPDYIRRYLP 98


>sp|RS8_SACI4|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 1 IEDFLRRFTP 10
+ D++RR+ P
Sbjct: 89 LPDYIRRYLP 98


>sp|RS8_SACI3|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 1 IEDFLRRFTP 10
+ D++RR+ P
Sbjct: 89 LPDYIRRYLP 98


>sp|RS8_SACI2|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 1 IEDFLRRFTP 10
+ D++RR+ P
Sbjct: 89 LPDYIRRYLP 98


>sp|RS8_SACI1|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 1 IEDFLRRFTP 10
+ D++RR+ P
Sbjct: 89 LPDYIRRYLP 98


>sp|RS8_METS5|SMALL ribosomal subunit protein uS8|Metallosphaera sedula (strain ATCC

Query: 1 IEDFLRRFTP 10
+ D++RR+ P
Sbjct: 89 LPDYIRRYLP 98


>sp|Y811_METJA|UNCHARACTERIZED protein MJ0811|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DFLRRF 8
DFLRRF
Sbjct: 248 DFLRRF 253


>sp|PRIS_METBF|DNA primase small subunit PriS|Methanosarcina barkeri (strain Fusaro /

Query: 1 IEDFLRRF 8
+EDFL RF
Sbjct: 300 VEDFLHRF 307


>sp|Y383_PYRFU|UNCHARACTERIZED protein PF0383|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IEDFLRRFT 9
IED+LRR +
Sbjct: 89 IEDYLRRIS 97


>sp|CSA5B_SACS2|CRISPR type I-A cluster 2/Apern-associated|Saccharolobus solfataricus

Query: 1 IEDFLR 6
IEDFLR
Sbjct: 106 IEDFLR 111


>sp|DHYS_SACI7|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IEDFLRRFTP 10
IE+ +R+F P
Sbjct: 140 IEEIVRKFLP 149


>sp|DHYS_SACI4|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IEDFLRRFTP 10
IE+ +R+F P
Sbjct: 140 IEEIVRKFLP 149


>sp|DHYS_SACI3|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.16.27)

Query: 1 IEDFLRRFTP 10
IE+ +R+F P
Sbjct: 140 IEEIVRKFLP 149


>sp|DHYS_SACI2|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IEDFLRRFTP 10
IE+ +R+F P
Sbjct: 140 IEEIVRKFLP 149


>sp|DHYS_SACI1|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IEDFLRRFTP 10
IE+ +R+F P
Sbjct: 140 IEEIVRKFLP 149


>sp|LEUD2_ARCFU|3-ISOPROPYLMALATE dehydratase small subunit 2|Archaeoglobus fulgidus (strain ATCC

Query: 3 DFLRRFTP 10
DF+++F P
Sbjct: 45 DFMKKFRP 52


>sp|DHYS_SACI6|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IEDFLRRFTP 10
IE+ +R+F P
Sbjct: 140 IEEIVRKFLP 149


>sp|HISX_ARCFU|HISTIDINOL dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IEDFLRRFT 9
+E FL+ FT
Sbjct: 357 VESFLKHFT 365


>sp|PRIS_METAC|DNA primase small subunit PriS|Methanosarcina acetivorans (strain ATCC

Query: 2 EDFLRRF 8
EDFL RF
Sbjct: 301 EDFLHRF 307


>sp|RL1_CENSY|LARGE ribosomal subunit protein uL1|Cenarchaeum symbiosum (strain A)

Query: 1 IEDFLRRF 8
IE FL RF
Sbjct: 138 IESFLERF 145


>sp|HPRT_METTH|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 2 EDFLRRFTP 10
E+ +RRF P
Sbjct: 44 EEIVRRFRP 52


>sp|RL31_META3|LARGE ribosomal subunit protein eL31|Methanococcus aeolicus (strain

Query: 1 IEDFLRRFT 9
I DFL+R T
Sbjct: 31 IRDFLKRHT 39


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 2 EDFLRRF 8
ED+L+RF
Sbjct: 482 EDYLQRF 488


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 EDFLRRF 8
ED LRRF
Sbjct: 764 EDLLRRF 770


>sp|PRIS_METJA|DNA primase small subunit PriS|Methanocaldococcus jannaschii (strain

Query: 3 DFLRRFTP 10
D LRRF P
Sbjct: 283 DELRRFNP 290


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 IEDFLRRF 8
++DF R+F
Sbjct: 4 VQDFFRKF 11


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 3 DFLRRFTP 10
D+L ++TP
Sbjct: 238 DYLEKYTP 245


>sp|TCPO_METOL|PROBABLE 2' cyclic ADP-D-ribose synthase|Methanobrevibacter olleyae

Query: 1 IEDFLRRF 8
IE+FL RF
Sbjct: 103 IENFLERF 110


>sp|MIG_AERPE|THYMINE-DNA glycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 2 EDFLRRF 8
E+FLRR+
Sbjct: 59 EEFLRRY 65


>sp|DPCKG_IGNH4|GTP-DEPENDENT dephospho-CoA kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 IEDFLRRF 8
+E+FLR F
Sbjct: 153 VEEFLREF 160




123|Sequence|611|620|RRFTPSCLTS

>sp|RIFK_SACS2|RIBOFLAVIN kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RFTPSCLTS 10
RF SCL+S
Sbjct: 26 RFLSSCLSS 34




124|Sequence|616|625|SCLTSGCSSI

>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SCLTSGCSSI 10
+CL GC+ I
Sbjct: 45 TCLNYGCTYI 54


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 3 LTSGCSSI 10
LTSGC+++
Sbjct: 521 LTSGCTAM 528


>sp|IDI2_METKA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanopyrus kandleri (strain AV19 /

Query: 3 LTSGCSSI 10
L +GCSS+
Sbjct: 319 LMAGCSSV 326


>sp|RACD_PYRHO|ASPARTATE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 CLTSGCSSI 10
C+ +GC+ +
Sbjct: 189 CIIAGCTEV 197


>sp|Y550_METJA|UNCHARACTERIZED protein MJ0550|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CLTSGCSSI 10
C+ GCS I
Sbjct: 238 CIELGCSRI 246




125|Sequence|621|630|GCSSIGSLAA

>sp|HEM1_META3|GLUTAMYL-TRNA reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GCSSIGSLA 9
GC SIGS A
Sbjct: 134 GCVSIGSAA 142


>sp|IF6_HALS3|TRANSLATION initiation factor 6|Halobacterium salinarum (strain ATCC 29341

Query: 1 GCSSIGSLAA 10
G S++GSLAA
Sbjct: 52 GSSTVGSLAA 61


>sp|Y224_METJA|UNCHARACTERIZED protein MJ0224|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CSSIGSLAA 10
C++IGS+ A
Sbjct: 152 CTAIGSIPA 160


>sp|IF6_METS3|TRANSLATION initiation factor 6|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GCSSIGSLA 9
GC+ IGSLA
Sbjct: 53 GCNLIGSLA 61


>sp|OFOB1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Aeropyrum pernix (strain ATCC

Query: 1 GCSSIGSLAA 10
GC G LAA
Sbjct: 20 GCGDFGILAA 29


>sp|MCRB_METBF|METHYL-COENZYME M reductase subunit beta|Methanosarcina barkeri (strain Fusaro /

Query: 2 CSSIGSLAA 10
C+++G+LAA
Sbjct: 303 CAAVGTLAA 311


>sp|MFNA_METVS|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus vannielii

Query: 1 GCSSIGSL 8
GC+ +GS+
Sbjct: 166 GCTELGSI 173


>sp|MFNA_METMP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 GCSSIGSL 8
GC+ +GS+
Sbjct: 166 GCTELGSI 173


>sp|MFNA_METM7|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 GCSSIGSL 8
GC+ +GS+
Sbjct: 166 GCTELGSI 173


>sp|MFNA_METM5|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 GCSSIGSL 8
GC+ +GS+
Sbjct: 166 GCTELGSI 173




126|Sequence|626|635|GSLAANKSSH

>sp|THIM_ARCFU|HYDROXYETHYLTHIAZOLE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GSLAANKSS 9
G LAA KSS
Sbjct: 229 GELAAEKSS 237




127|Sequence|631|640|NKSSHKLGSS

>sp|RS15_CALMQ|SMALL ribosomal subunit protein uS15|Caldivirga maquilingensis (strain

Query: 1 NKSSHKLGSS 10
++S HK GSS
Sbjct: 3 HRSRHKRGSS 12


>sp|ARNR1_SULAC|HTH-TYPE transcriptional activator ArnR1|Sulfolobus acidocaldarius (strain

Query: 1 NKSSHKLGSS 10
+K+SH+LG S
Sbjct: 138 DKASHELGIS 147




128|Sequence|636|645|KLGSSFPSTP

>sp|RNH2_METTP|RIBONUCLEASE HII|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LGSSFPSTP 10
LGS +PS P
Sbjct: 168 LGSGYPSDP 176


>sp|RRP42_PYRFU|EXOSOME complex component Rrp42|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LGSSFPSTP 10
LG FP TP
Sbjct: 67 LGEPFPDTP 75


>sp|RRP42_PYRHO|EXOSOME complex component Rrp42|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LGSSFPSTP 10
LG FP TP
Sbjct: 67 LGEPFPDTP 75


>sp|RRP42_PYRAB|EXOSOME complex component Rrp42|Pyrococcus abyssi (strain GE5 /

Query: 2 LGSSFPSTP 10
LG FP TP
Sbjct: 67 LGEPFPDTP 75


>sp|RNH2_METMP|RIBONUCLEASE HII|Methanococcus maripaludis (strain DSM 14266

Query: 1 KLGSSFPSTP 10
++GS +PS P
Sbjct: 189 EIGSGYPSDP 198


>sp|RNH2_METM7|RIBONUCLEASE HII|Methanococcus maripaludis (strain C7 /

Query: 1 KLGSSFPSTP 10
++GS +PS P
Sbjct: 186 EIGSGYPSDP 195


>sp|RNH2_METM6|RIBONUCLEASE HII|Methanococcus maripaludis (strain C6 /

Query: 1 KLGSSFPSTP 10
++GS +PS P
Sbjct: 186 EIGSGYPSDP 195


>sp|RNH2_METM5|RIBONUCLEASE HII|Methanococcus maripaludis (strain C5 /

Query: 1 KLGSSFPSTP 10
++GS +PS P
Sbjct: 186 EIGSGYPSDP 195


>sp|RFRNP_IGNH4|RNA-FREE ribonuclease P|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KLGSSFPSTP 10
KLG SF +TP
Sbjct: 42 KLGFSFYTTP 51


>sp|RNH2_THEON|RIBONUCLEASE HII|Thermococcus onnurineus (strain NA1)

Query: 1 KLGSSFPSTP 10
++GS +PS P
Sbjct: 165 EIGSGYPSDP 174


>sp|RNH2_THEKO|RIBONUCLEASE HII|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KLGSSFPSTP 10
++GS +PS P
Sbjct: 165 EIGSGYPSDP 174


>sp|RNH2_METKA|RIBONUCLEASE HII|Methanopyrus kandleri (strain AV19 /

Query: 1 KLGSSFPSTP 10
++GS +PS P
Sbjct: 158 EVGSGYPSDP 167


>sp|RNH2_METS3|RIBONUCLEASE HII|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LGSSFPSTP 10
+GS +PS P
Sbjct: 167 IGSGYPSDP 175


>sp|RNH2_METJA|RIBONUCLEASE HII|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LGSSFPSTP 10
+GS +PS P
Sbjct: 180 IGSGYPSDP 188


>sp|RNH2_METLZ|RIBONUCLEASE HII|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KLGSSFPSTP 10
++GS +PS P
Sbjct: 160 EIGSGYPSDP 169


>sp|RNH2_METTH|RIBONUCLEASE HII|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LGSSFPSTP 10
+GS +PS P
Sbjct: 168 IGSGYPSDP 176


>sp|RRP42_METTH|EXOSOME complex component Rrp42|Methanothermobacter thermautotrophicus

Query: 1 KLGSSFPSTP 10
++G FP TP
Sbjct: 67 QIGEPFPDTP 76


>sp|DTDA_SULTO|D-AMINOACYL-TRNA deacylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KLGSSFPS 8
KLG +FPS
Sbjct: 76 KLGIAFPS 83


>sp|RNH2_HALMA|RIBONUCLEASE HII|Haloarcula marismortui (strain ATCC 43049

Query: 2 LGSSFPSTP 10
+GS +PS P
Sbjct: 161 VGSGYPSDP 169


>sp|RNH2_NATPD|RIBONUCLEASE HII|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LGSSFPSTP 10
+GS +PS P
Sbjct: 162 VGSGYPSDP 170


>sp|IF2P_THEPD|PROBABLE translation initiation factor IF-2|Thermofilum pendens (strain DSM

Query: 5 SFPSTP 10
SFP+TP
Sbjct: 147 SFPNTP 152


>sp|CBIM_HALS3|PUTATIVE cobalt transport protein CbiM|Halobacterium salinarum (strain ATCC

Query: 1 KLGSSFPSTP 10
+LG +FPS P
Sbjct: 158 QLGVAFPSGP 167


>sp|RNH2_THESM|RIBONUCLEASE HII|Thermococcus sibiricus (strain DSM 12597

Query: 2 LGSSFPSTP 10
+GS +PS P
Sbjct: 166 IGSGYPSDP 174


>sp|RNH2_METBU|RIBONUCLEASE HII|Methanococcoides burtonii (strain DSM 6242

Query: 2 LGSSFPSTP 10
+GS +PS P
Sbjct: 173 IGSGYPSDP 181


>sp|RNH2_METB6|RIBONUCLEASE HII|Methanoregula boonei (strain DSM 21154

Query: 1 KLGSSFPSTP 10
++GS +PS P
Sbjct: 161 QIGSGYPSDP 170


>sp|RNH2_METHJ|RIBONUCLEASE HII|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LGSSFPSTP 10
+GS +PS P
Sbjct: 162 IGSGYPSDP 170


>sp|RRP42_THEVO|EXOSOME complex component Rrp42|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GSSFPSTP 10
G FP TP
Sbjct: 70 GEPFPDTP 77


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KLGSSFPST 9
+LGSSF +T
Sbjct: 1033 ELGSSFETT 1041


>sp|RRP42_METAR|EXOSOME complex component Rrp42|Methanocella arvoryzae (strain DSM 22066

Query: 3 GSSFPSTP 10
G FP TP
Sbjct: 67 GEPFPDTP 74


>sp|RRP42_THEAC|EXOSOME complex component Rrp42|Thermoplasma acidophilum (strain ATCC

Query: 3 GSSFPSTP 10
G FP TP
Sbjct: 70 GEPFPDTP 77




129|Sequence|641|650|FPSTPSSDGM

>sp|G1PDH_THESM|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus sibiricus (strain DSM 12597

Query: 1 FPSTPSSDGM 10
FP+T S DG+
Sbjct: 117 FPTTASHDGI 126


>sp|G1PDH_PYRHO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FPSTPSSDGM 10
FP+T S DG+
Sbjct: 113 FPTTASHDGI 122


>sp|G1PDH_PYRFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FPSTPSSDGM 10
FP+T S DG+
Sbjct: 113 FPTTASHDGI 122


>sp|G1PDH_PYRAB|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus abyssi (strain GE5 /

Query: 1 FPSTPSSDGM 10
FP+T S DG+
Sbjct: 113 FPTTASHDGI 122


>sp|G1PDH_THEKO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus kodakarensis (strain ATCC

Query: 1 FPSTPSSDGM 10
FP+T S DG+
Sbjct: 118 FPTTASHDGI 127


>sp|G1PDH_PICTO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Picrophilus torridus (strain ATCC 700027

Query: 2 PSTPSSDGM 10
P+TPS DG+
Sbjct: 118 PTTPSHDGI 126


>sp|G1PDH_SACI7|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 PSTPSSDGM 10
P++PS DG+
Sbjct: 118 PTSPSHDGI 126


>sp|G1PDH_SACI6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PSTPSSDGM 10
P++PS DG+
Sbjct: 118 PTSPSHDGI 126


>sp|G1PDH_SACI4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PSTPSSDGM 10
P++PS DG+
Sbjct: 118 PTSPSHDGI 126


>sp|G1PDH_SACI3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.16.27)

Query: 2 PSTPSSDGM 10
P++PS DG+
Sbjct: 118 PTSPSHDGI 126


>sp|G1PDH_SACI2|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PSTPSSDGM 10
P++PS DG+
Sbjct: 118 PTSPSHDGI 126


>sp|G1PDH_SACI1|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 PSTPSSDGM 10
P++PS DG+
Sbjct: 118 PTSPSHDGI 126


>sp|G1PDH_HYPBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Hyperthermus butylicus (strain DSM 5456

Query: 2 PSTPSSDGM 10
P++PS DG+
Sbjct: 116 PTSPSHDGI 124


>sp|G1PDH_SULAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Sulfolobus acidocaldarius (strain ATCC

Query: 2 PSTPSSDGM 10
P++PS DG+
Sbjct: 118 PTSPSHDGI 126


>sp|G1PDH_THEVO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PSTPSSDGM 10
P++PS DG+
Sbjct: 120 PTSPSHDGI 128


>sp|G1PDH_SACS2|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus solfataricus (strain ATCC

Query: 2 PSTPSSDGM 10
P++PS DG+
Sbjct: 118 PTSPSHDGI 126


>sp|DNAG_METST|DNA primase DnaG|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PSTPSSDGM 10
P+TP+SD +
Sbjct: 167 PNTPTSDAI 175


>sp|G1PDH_SULTO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FPSTPSSDGM 10
P+ PS DG+
Sbjct: 116 LPTAPSHDGI 125


>sp|G1PDH_THEAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PSTPSSDGM 10
P+ PS DG+
Sbjct: 120 PTAPSHDGI 128


>sp|G1PDH_METS5|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Metallosphaera sedula (strain ATCC 51363

Query: 2 PSTPSSDGM 10
P+ PS DG+
Sbjct: 118 PTAPSHDGI 126


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 1 FPSTPSSD 8
+P TPSS+
Sbjct: 37 YPGTPSSE 44


>sp|G1PDH_METJA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PSTPSSDGM 10
P+T S+DG+
Sbjct: 99 PTTASNDGI 107


>sp|G1PDH_META3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus aeolicus (strain ATCC

Query: 2 PSTPSSDGM 10
P+T S+DG+
Sbjct: 102 PTTASNDGI 110


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 1 FPSTPSSD 8
+P TPSS+
Sbjct: 40 YPGTPSSE 47


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 1 FPSTPSSD 8
+P TPSS+
Sbjct: 40 YPGTPSSE 47


>sp|G1PDH_METVS|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus vannielii (strain ATCC 35089

Query: 2 PSTPSSDGM 10
P+T S+DG+
Sbjct: 98 PTTASNDGI 106


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain

Query: 1 FPSTPSSD 8
+P TPSS+
Sbjct: 40 YPGTPSSE 47


>sp|G1PDH_METM7|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain C7 /

Query: 2 PSTPSSDGM 10
P+T S+DG+
Sbjct: 98 PTTASNDGI 106


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 FPSTPSSD 8
+P TPSS+
Sbjct: 38 YPGTPSSE 45


>sp|G1PDH_METMP|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain DSM 14266

Query: 2 PSTPSSDGM 10
P+T S+DG+
Sbjct: 98 PTTASNDGI 106


>sp|G1PDH_METM5|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain C5 /

Query: 2 PSTPSSDGM 10
P+T S+DG+
Sbjct: 98 PTTASNDGI 106


>sp|G1PDH_METM6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain C6 /

Query: 2 PSTPSSDGM 10
P+T S+DG+
Sbjct: 98 PTTASNDGI 106


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter

Query: 1 FPSTPSSD 8
+P TPSS+
Sbjct: 38 YPGTPSSE 45


>sp|MTSA_METBA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina barkeri

Query: 1 FPSTPSSDG 9
FP+ PS+ G
Sbjct: 198 FPADPSASG 206




130|Sequence|646|655|SSDGMLLRLE

>sp|PYLB_METBF|3-METHYLORNITHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DGMLLRL 9
DGM+LRL
Sbjct: 284 DGMVLRL 290




131|Sequence|651|660|LLRLEERLGQ

>sp|ENO_METBF|ENOLASE barkeri (strain Fusaro /

Query: 1 LLRLEERLGQ 10
LLR+EE LG+
Sbjct: 412 LLRIEEDLGE 421


>sp|ENO_METMA|ENOLASE mazei (strain ATCC BAA-159

Query: 1 LLRLEERLGQ 10
LLR+EE LG+
Sbjct: 412 LLRIEEDLGE 421


>sp|ENO_METBU|ENOLASE burtonii (strain DSM 6242

Query: 1 LLRLEERLG 9
LLR+EE LG
Sbjct: 409 LLRIEEDLG 417


>sp|DPHB_SACS2|DIPHTHINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LLRLEER 7
LLRLEER
Sbjct: 186 LLRLEER 192


>sp|ENO_METAC|ENOLASE acetivorans (strain ATCC 35395

Query: 1 LLRLEERLGQ 10
LLR+EE LG+
Sbjct: 413 LLRIEEDLGE 422


>sp|AMZA_PYRFU|ARCHAEMETZINCIN furiosus (strain ATCC 43587

Query: 1 LLRLEERLGQ 10
L +LEERLG+
Sbjct: 176 LRKLEERLGR 185


>sp|TRM56_METST|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosphaera stadtmanae

Query: 1 LLRLEERLGQ 10
+LRL+ RLG+
Sbjct: 4 VLRLDHRLGR 13


>sp|Y557_PICTO|PUTATIVE HTH-type transcriptional regulatory protein|Picrophilus torridus

Query: 2 LRLEERLGQ 10
L+LEE LG+
Sbjct: 172 LKLEETLGE 180


>sp|DPHB_PYRAE|DIPHTHINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LLRLEERLGQ 10
LL+LEER+G+
Sbjct: 181 LLQLEERVGR 190


>sp|ENO_META3|ENOLASE aeolicus (strain ATCC BAA-1280

Query: 1 LLRLEERLG 9
L+R+EE +G
Sbjct: 404 LIRIEEEIG 412


>sp|TRM56_METS3|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanobrevibacter smithii

Query: 1 LLRLEERLGQ 10
+LRL+ R+G+
Sbjct: 6 VLRLDHRIGR 15


>sp|RRP41_HYPBU|EXOSOME complex component Rrp41|Hyperthermus butylicus (strain DSM 5456

Query: 1 LLRLEERLGQ 10
L+R EER GQ
Sbjct: 11 LIRWEERDGQ 20


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus

Query: 1 LLRLEERLGQ 10
LLRL++ LGQ
Sbjct: 75 LLRLKKPLGQ 84


>sp|PIMT_PYRAE|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LLRLEERLGQ 10
++ +EERLGQ
Sbjct: 170 VIPVEERLGQ 179




132|Sequence|656|665|ERLGQPTSAI

>sp|PGP_METTP|PHOSPHOGLYCOLATE phosphatase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ERLGQPTSAI 10
ERLG PT I
Sbjct: 155 ERLGIPTKRI 164


>sp|G1PDH_METS5|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Metallosphaera sedula (strain ATCC 51363

Query: 1 ERLGQPTSA 9
+R+G PT+A
Sbjct: 294 DRIGAPTTA 302


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ERLGQPTS 8
ER+G+P S
Sbjct: 224 ERMGRPVS 231


>sp|APAUH_THEKO|N(1)-AMINOPROPYLAGMATINE ureohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ERLGQPTS 8
E+LG PT+
Sbjct: 262 EKLGDPTA 269


>sp|PTH_THEKO|PEPTIDYL-TRNA hydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ERLGQPTSAI 10
E+LG PT+ I
Sbjct: 73 EKLGLPTALI 82


>sp|PTH_THEON|PEPTIDYL-TRNA hydrolase|Thermococcus onnurineus (strain NA1)

Query: 1 ERLGQPTSAI 10
E+LG PT+ I
Sbjct: 73 EKLGIPTALI 82


>sp|PTH_PYRFU|PEPTIDYL-TRNA hydrolase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ERLGQPTSAI 10
E+LG PT+ I
Sbjct: 74 EKLGLPTALI 83




133|Sequence|661|670|PTSAIASNGY

>sp|PUR5_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PTSAIASNG 9
P+S I SNG
Sbjct: 177 PSSGIHSNG 185


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 1 PTSAIASNG 9
PTSAIA G
Sbjct: 445 PTSAIAGMG 453


>sp|ILVD_METBU|DIHYDROXY-ACID dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PTSAIASNG 9
PTSAIA G
Sbjct: 448 PTSAIAGMG 456


>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PTSAIASNG 9
PTSAIA G
Sbjct: 445 PTSAIAGMG 453


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PTSAIASNG 9
PTSAIA G
Sbjct: 445 PTSAIAGMG 453


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PTSAIASNG 9
PTSAIA G
Sbjct: 442 PTSAIAGAG 450


>sp|HIS6_NATPD|IMIDAZOLE glycerol phosphate synthase subunit|Natronomonas pharaonis (strain

Query: 1 PTSAIASNG 9
PT IAS+G
Sbjct: 215 PTPVIASSG 223




134|Sequence|666|675|ASNGYSSQAD

***** No hits found ******


135|Sequence|671|680|SSQADNWASE

>sp|PIWI_ARCFU|PIWI protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 ADNWASE 10
+DNW SE
Sbjct: 352 SDNWTSE 358


>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 2 SQADNWA 8
+++DNWA
Sbjct: 86 TESDNWA 92


>sp|TRUB_THEAC|PROBABLE tRNA pseudouridine synthase B|Thermoplasma acidophilum (strain

Query: 1 SSQADNWASE 10
S Q D+W E
Sbjct: 20 SHQVDHWVRE 29




136|Sequence|676|685|NWASELAQEQ

>sp|NTPPA_METAC|DTTP/UTP pyrophosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 WASELAQEQ 10
W +EL++EQ
Sbjct: 127 WLAELSKEQ 135


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 1 NWASELAQEQ 10
+WASEL +E+
Sbjct: 627 DWASELDEER 636


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 1 NWASELAQEQ 10
+WASEL +E+
Sbjct: 627 DWASELDEER 636


>sp|SYY_PICTO|TYROSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 WASELAQE 9
WASEL ++
Sbjct: 108 WASELVEK 115


>sp|IDH_HALVD|ISOCITRATE dehydrogenase [NADP]|Haloferax volcanii (strain ATCC 29605

Query: 1 NWASELAQEQ 10
+W ELA+E+
Sbjct: 241 DWGYELAEEE 250


>sp|DNLI_METM6|DNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 NWASELAQEQ 10
NW SEL + Q
Sbjct: 371 NWDSELEKIQ 380


>sp|CARA_ARCFU|CARBAMOYL phosphate synthase small chain|Archaeoglobus fulgidus (strain

Query: 1 NWASELAQEQ 10
NW SE++ ++
Sbjct: 89 NWRSEMSVDE 98


>sp|Y1408_METJA|UNCHARACTERIZED protein MJ1408|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WASELAQE 9
WASEL ++
Sbjct: 104 WASELVRK 111




137|Sequence|681|690|LAQEQESERE

***** No hits found ******


138|Sequence|686|695|ESERELRYEA

>sp|Y070_ARCFU|UNCHARACTERIZED protein AF_0070|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ESERELRYE 9
ES+REL +E
Sbjct: 48 ESQRELNFE 56


>sp|FTSZ1_PYRFU|CELL division protein FtsZ 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ESERELR 7
ESERELR
Sbjct: 114 ESERELR 120


>sp|FTSZ1_PYRAB|CELL division protein FtsZ 1|Pyrococcus abyssi (strain GE5 /

Query: 1 ESERELR 7
ESERELR
Sbjct: 114 ESERELR 120


>sp|CAS1C_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ESERELRY 8
E ERE+RY
Sbjct: 244 EPEREVRY 251


>sp|GLPK2_SACS2|GLYCEROL kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ESERELRYEA 10
+ ERE RY A
Sbjct: 472 KEERERRYNA 481


>sp|FTSZ1_PYRWO|CELL division protein FtsZ 1|Pyrococcus woesei

Query: 1 ESERELR 7
ESERELR
Sbjct: 108 ESERELR 114


>sp|RS9_SULAC|SMALL ribosomal subunit protein uS9|Sulfolobus acidocaldarius (strain

Query: 1 ESERELRYEA 10
ESE+ +RY A
Sbjct: 120 ESEKWMRYSA 129


>sp|RS9_SULTO|SMALL ribosomal subunit protein uS9|Sulfurisphaera tokodaii (strain DSM

Query: 1 ESERELRYEA 10
ESE+ +RY A
Sbjct: 119 ESEKWMRYSA 128


>sp|RS9_SACS2|SMALL ribosomal subunit protein uS9|Saccharolobus solfataricus (strain

Query: 1 ESERELRYEA 10
ESE+ +RY A
Sbjct: 119 ESEKWMRYSA 128


>sp|DPHB_THEAC|DIPHTHINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SERELRYEA 10
+ ELRYEA
Sbjct: 89 THNELRYEA 97


>sp|NDK_PYRAE|NUCLEOSIDE diphosphate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ESERELRY 8
E+ERE+R+
Sbjct: 167 EAEREIRF 174


>sp|FTSZ1_THEKO|CELL division protein FtsZ 1|Thermococcus kodakarensis (strain ATCC

Query: 1 ESERELR 7
ESERE+R
Sbjct: 114 ESEREIR 120




139|Sequence|691|700|LRYEAESPDE

>sp|SRP54_PYRNV|SIGNAL recognition particle 54 kDa|Pyrobaculum neutrophilum (strain DSM

Query: 3 YEAESPDE 10
YEA SPDE
Sbjct: 205 YEAVSPDE 212


>sp|SRP54_PYRAE|SIGNAL recognition particle 54 kDa|Pyrobaculum aerophilum (strain ATCC

Query: 3 YEAESPDE 10
Y+A SPDE
Sbjct: 205 YDAVSPDE 212


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LRYEAESPDE 10
RY AE PD+
Sbjct: 148 FRYIAEDPDK 157


>sp|Y1959_METB6|UPF0179 protein Mboo_1959|Methanoregula boonei (strain DSM 21154

Query: 3 YEAESPD 9
YE ESP+
Sbjct: 24 YEGESPE 30


>sp|PYRF_METMA|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina mazei (strain ATCC

Query: 3 YEAESPDE 10
Y+AESP E
Sbjct: 197 YKAESPKE 204


>sp|PYRF_METTE|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina thermophila

Query: 3 YEAESPDE 10
Y+AESP E
Sbjct: 191 YKAESPKE 198


>sp|PYRF_METAC|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina acetivorans (strain ATCC

Query: 3 YEAESPDE 10
Y+AESP E
Sbjct: 197 YKAESPKE 204


>sp|SRP54_PYRIL|SIGNAL recognition particle 54 kDa|Pyrobaculum islandicum (strain DSM 4184

Query: 3 YEAESPDE 10
YEA +PDE
Sbjct: 205 YEAVNPDE 212


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LRYEAESPD 9
LRY E+PD
Sbjct: 6 LRYLRENPD 14


>sp|SRP54_ACIAM|SIGNAL recognition particle 54 kDa|Acidianus ambivalens (Desulfurolobus

Query: 3 YEAESPDE 10
YEA PDE
Sbjct: 208 YEAIKPDE 215


>sp|PYRF_METBF|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 3 YEAESPDE 10
Y+AESP E
Sbjct: 197 YKAESPRE 204




140|Sequence|696|705|ESPDEAALVY

>sp|KDGK1_HALVD|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE volcanii (strain ATCC 29605

Query: 2 SPDEAALVY 10
SPDEAA VY
Sbjct: 176 SPDEAAEVY 184


>sp|Y958_METJA|UNCHARACTERIZED protein MJ0958|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SPDEAALVY 10
SP+EA LVY
Sbjct: 149 SPNEALLVY 157


>sp|CMR4_SACS2|CRISPR system CMR subunit Cmr4|Saccharolobus solfataricus (strain ATCC

Query: 1 ESPDEAAL 8
E+PDEA+L
Sbjct: 79 ENPDEASL 86


>sp|UVRC_NATPD|UVRABC system protein C|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SPDEAALVY 10
+PDEAA V+
Sbjct: 116 TPDEAATVF 124


>sp|TF2B_SACSH|TRANSCRIPTION initiation factor IIB|Saccharolobus shibatae (strain ATCC 51178

Query: 4 DEAALVY 10
DEAAL+Y
Sbjct: 139 DEAALIY 145


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 4 DEAALVY 10
DEAAL+Y
Sbjct: 142 DEAALIY 148


>sp|TRPD_METMP|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 ESPDEAA 7
ESPDE+A
Sbjct: 254 ESPDESA 260


>sp|TRPD_METM5|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 ESPDEAA 7
ESPDE+A
Sbjct: 254 ESPDESA 260


>sp|TRPD_METM6|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 ESPDEAA 7
ESPDE+A
Sbjct: 254 ESPDESA 260


>sp|TRPD_METM7|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 ESPDEAA 7
ESPDE+A
Sbjct: 254 ESPDESA 260


>sp|TF2B_SULTO|TRANSCRIPTION initiation factor IIB|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 DEAALVY 10
DEAAL+Y
Sbjct: 141 DEAALIY 147


>sp|TF2B_SULAC|TRANSCRIPTION initiation factor IIB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 DEAALVY 10
DEAAL+Y
Sbjct: 140 DEAALIY 146


>sp|FAEHP_METB6|BIFUNCTIONAL enzyme Fae/Hps|Methanoregula boonei (strain DSM 21154

Query: 3 PDEAALVY 10
PDE LVY
Sbjct: 145 PDEKTLVY 152


>sp|NADA_METKA|QUINOLINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 ESPDEAALVY 10
E PD A +VY
Sbjct: 87 EHPDAAVVVY 96


>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 1 ESPDEAA 7
E+PDEAA
Sbjct: 288 EAPDEAA 294


>sp|SRP54_AERPE|SIGNAL recognition particle 54 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 3 PDEAALV 9
PDE ALV
Sbjct: 210 PDEVALV 216


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ESPDEAALVY 10
+ PD A +VY
Sbjct: 107 KRPDRATIVY 116


>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PDEAALV 9
PDEAA V
Sbjct: 127 PDEAAFV 133


>sp|FEN_PYRAE|FLAP endonuclease 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PDEAAL 8
PDEAAL
Sbjct: 303 PDEAAL 308




141|Sequence|701|710|AALVYAARAY

>sp|GATE_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus solfataricus (strain ATCC

Query: 1 AALVYAARAY 10
LVY RAY
Sbjct: 305 GGLVYGIRAY 314


>sp|GATE_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 AALVYAARAY 10
LVY RAY
Sbjct: 305 GGLVYGIRAY 314


>sp|GATE_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.16.4

Query: 1 AALVYAARAY 10
LVY RAY
Sbjct: 305 GGLVYGIRAY 314


>sp|GATE_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.14.25

Query: 1 AALVYAARAY 10
LVY RAY
Sbjct: 305 GGLVYGIRAY 314


>sp|GATE_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 AALVYAARAY 10
LVY RAY
Sbjct: 305 GGLVYGIRAY 314


>sp|GATE_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 AALVYAARAY 10
LVY RAY
Sbjct: 305 GGLVYGIRAY 314


>sp|GATE_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 AALVYAARAY 10
LVY RAY
Sbjct: 305 GGLVYGIRAY 314


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 3 LVYAARAY 10
L YAAR Y
Sbjct: 75 LAYAAREY 82


>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC

Query: 3 LVYAARAY 10
L YAAR Y
Sbjct: 75 LAYAARKY 82


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 3 LVYAARAY 10
L YAAR Y
Sbjct: 75 LAYAAREY 82


>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus fulgidus

Query: 1 AALVYAARAY 10
AALV+A R Y
Sbjct: 313 AALVFAERFY 322




142|Sequence|706|715|AARAYNCVLV

>sp|TRMY_AERPE|TRNA (pseudouridine(54)-N(1))-methyltransferase|Aeropyrum pernix

Query: 2 ARAYNCVL 9
ARAYN +L
Sbjct: 33 ARAYNAIL 40


>sp|RADA_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 2 ARAYNCVLV 10
A YNCV++
Sbjct: 275 ADIYNCVVI 283




143|Sequence|711|720|NCVLVERLHD

>sp|Y1526_METAR|PUTATIVE HTH-type transcriptional regulatory protein|Methanocella arvoryzae

Query: 2 CVLVERLHD 10
CV +E LHD
Sbjct: 98 CVNIETLHD 106


>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 1 NCVLVERLH 9
NCV+VE H
Sbjct: 176 NCVIVEGGH 184


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 1 NCVLVERLHD 10
N VLV+RL +
Sbjct: 197 NSVLVDRLRE 206


>sp|PURA_METTH|ADENYLOSUCCINATE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 CVLVERLH 9
C ++ER H
Sbjct: 103 CAIIERKH 110




144|Sequence|716|725|ERLHDQVSVE

>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 1 ERLHDQV 7
ER+HD++
Sbjct: 350 ERIHDEI 356


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 4 HDQVSV 9
HDQ+SV
Sbjct: 134 HDQISV 139


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 ERLHDQVSVE 10
ER+ D+VSV+
Sbjct: 154 ERILDEVSVD 163




145|Sequence|721|730|QVSVELPHLG

>sp|PGK_METMA|PHOSPHOGLYCERATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QVSVELPHLG 10
+SVE+ HLG
Sbjct: 364 HISVEVAHLG 373


>sp|PGK2_METAC|PHOSPHOGLYCERATE kinase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QVSVELPHLG 10
+SVE+ HLG
Sbjct: 364 HISVEVAHLG 373


>sp|HIS5_SULTO|IMIDAZOLE glycerol phosphate synthase subunit|Sulfurisphaera tokodaii (strain

Query: 3 SVELPHLG 10
+V+LPH+G
Sbjct: 108 NVKLPHIG 115


>sp|HIS5_SACS2|IMIDAZOLE glycerol phosphate synthase subunit|Saccharolobus solfataricus

Query: 3 SVELPHLG 10
+V+LPH+G
Sbjct: 108 NVKLPHIG 115


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VSVELPHL 9
V V+LPHL
Sbjct: 376 VLVQLPHL 383


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VSVELPH 8
++VE+PH
Sbjct: 462 INVEIPH 468




146|Sequence|726|735|LPHLGRLTFE

>sp|GYAR_PYRFU|GLYOXYLATE reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PHLGRLTFE 10
PH+G TFE
Sbjct: 287 PHIGSATFE 295


>sp|PRIL_THEVO|DNA primase large subunit PriL|Thermoplasma volcanium (strain ATCC

Query: 1 LPHLGRL 7
+PH+GRL
Sbjct: 232 VPHMGRL 238


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LPHLGRLT 8
LP +GR+T
Sbjct: 706 LPQMGRIT 713


>sp|RLME_NATPD|RIBOSOMAL RNA large subunit methyltransferase|Natronomonas pharaonis (strain

Query: 3 HLGRLTFE 10
HL R+ FE
Sbjct: 125 HLARMAFE 132


>sp|EF1A_METST|ELONGATION factor 1-alpha|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LPHLGRL 7
+PH+GR
Sbjct: 386 IPHMGRF 392


>sp|SMC_PYRFU|CHROMOSOME partition protein Smc|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LGRLTF 9
LGRLTF
Sbjct: 572 LGRLTF 577


>sp|EF1A_METTH|ELONGATION factor 1-alpha|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LPHLGRL 7
+PH+GR
Sbjct: 386 IPHMGRF 392


>sp|DYRA_HALVD|DIHYDROFOLATE reductase HdrA|Haloferax volcanii (strain ATCC 29605

Query: 4 LGRLTFE 10
LGR TFE
Sbjct: 44 LGRTTFE 50


>sp|HISX_METKA|HISTIDINOL dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 LPHLGRLTFE 10
LP + R+TF+
Sbjct: 99 LPRVDRITFD 108


>sp|BRIX_METKA|PROBABLE Brix domain-containing ribosomal biogenesis|Methanopyrus kandleri

Query: 3 HLGRLTF 9
HLG LTF
Sbjct: 161 HLGTLTF 167




147|Sequence|731|740|RLTFELLHTL

>sp|GATE_CALMQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Caldivirga maquilingensis (strain ATCC

Query: 1 RLTFELL 7
R+TFELL
Sbjct: 440 RITFELL 446




148|Sequence|736|745|LLHTLGFDSV

>sp|IDI2_META3|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LLHTLGFDSV 10
LL+ LGFDS+
Sbjct: 214 LLNGLGFDSI 223


>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 2 LHTLGFDS 9
LHT GFD+
Sbjct: 349 LHTAGFDA 356


>sp|TOP6B_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 3 HTLGFDS 9
H LGFDS
Sbjct: 37 HMLGFDS 43


>sp|TOP6B_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 3 HTLGFDS 9
H LGFDS
Sbjct: 37 HMLGFDS 43


>sp|TOP6B_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 3 HTLGFDS 9
H LGFDS
Sbjct: 36 HMLGFDS 42


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LHTLGFDSV 10
LHT FD++
Sbjct: 210 LHTYAFDTI 218


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LHTLGFDSV 10
LHT FD++
Sbjct: 210 LHTYAFDTI 218


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LHTLGFDSV 10
LHT FD++
Sbjct: 210 LHTYAFDTI 218


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LHTLGFDSV 10
LHT FD++
Sbjct: 210 LHTYAFDTI 218


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 LHTLGFDSV 10
LHT FD++
Sbjct: 210 LHTYAFDTI 218


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LHTLGFDSV 10
LHT FD++
Sbjct: 210 LHTYAFDTI 218


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LHTLGFDSV 10
LHT FD++
Sbjct: 210 LHTYAFDTI 218


>sp|K6PF_METAC|ADP-SPECIFIC phosphofructokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LHTLGFDSV 10
+H+LG D+V
Sbjct: 303 VHSLGLDTV 311


>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 2 LHTLGFDS 9
LH+LGF++
Sbjct: 346 LHSLGFEA 353


>sp|AROK_METS3|SHIKIMATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 HTLGFDS 9
+TLGFDS
Sbjct: 223 NTLGFDS 229


>sp|K6PF_METJA|BIFUNCTIONAL ADP-specific glucokinase/phosphofructokinase|Methanocaldococcus

Query: 1 LLHTLGFDSV 10
+LH LG+D +
Sbjct: 306 VLHILGYDEL 315


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 LLHTLGFD 8
L+H+LG D
Sbjct: 551 LIHSLGLD 558


>sp|PGK_METLZ|PHOSPHOGLYCERATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LLHTLGFD 8
L+H LG+D
Sbjct: 247 LIHMLGYD 254


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLHTLGF 7
LLH LGF
Sbjct: 197 LLHLLGF 203


>sp|Y1811_METBU|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcoides

Query: 1 LLHTLGFD 8
L++TLG+D
Sbjct: 220 LIYTLGYD 227


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LLHTLGFDS 9
+LH +G+DS
Sbjct: 74 VLHPMGWDS 82


>sp|PFP_THETK|PYROPHOSPHATE--FRUCTOSE 6-phosphate 1-phosphotransferase|Thermoproteus tenax (strain ATCC

Query: 3 HTLGFDS 9
+T+GFDS
Sbjct: 134 YTIGFDS 140


>sp|ARLY_META3|ARGININOSUCCINATE lyase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 LGFDSV 10
LGFDSV
Sbjct: 221 LGFDSV 226


>sp|ARLY_HALMA|ARGININOSUCCINATE lyase|Haloarcula marismortui (strain ATCC 43049

Query: 5 LGFDSV 10
LGFDSV
Sbjct: 225 LGFDSV 230


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLHTLGFDSV 10
+LHT G D V
Sbjct: 276 VLHTEGIDEV 285


>sp|PIMT_METAR|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LLHTLGFDSV 10
+L LGFD+V
Sbjct: 93 VLSRLGFDNV 102




149|Sequence|741|750|GFDSVRKRMS

>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 1 GFDSVRKRM 9
G D+VRKRM
Sbjct: 41 GADAVRKRM 49


>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GFDSVRKRMS 10
GFD V KRM+
Sbjct: 336 GFDVVVKRMA 345


>sp|IDI2_SULTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FDSVRKR 8
+DSVRKR
Sbjct: 361 YDSVRKR 367


>sp|AROA_METM6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 GFDSVRKR 8
G DS+RKR
Sbjct: 111 GDDSIRKR 118


>sp|AROA_METM5|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 GFDSVRKR 8
G DS+RKR
Sbjct: 111 GDDSIRKR 118


>sp|AROA_METVS|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 GFDSVRKR 8
G DS+RKR
Sbjct: 111 GDDSIRKR 118


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GFDSVRKRMS 10
G D ++K+M+
Sbjct: 365 GLDGIKKKMT 374


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 FDSVRKRMS 10
FDS RKR +
Sbjct: 8811 FDSTRKRYA 8819


>sp|AROA_METMP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 GFDSVRKR 8
G DS+RKR
Sbjct: 111 GDDSIRKR 118


>sp|AROA_METM7|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 GFDSVRKR 8
G DS+RKR
Sbjct: 111 GDDSIRKR 118


>sp|AROA_METJA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 GFDSVRKR 8
G DS+RKR
Sbjct: 115 GDDSIRKR 122


>sp|ILVC_SACS2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 3 DSVRKRM 9
+SVRKRM
Sbjct: 272 ESVRKRM 278


>sp|AMPPA_HYPBU|AMP phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 2 FDSVRKRMS 10
FD+ +KR+S
Sbjct: 89 FDAFKKRLS 97


>sp|DPCKG_SACI6|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GFDSVRKRMS 10
FD++RK +S
Sbjct: 14 AFDNLRKELS 23


>sp|AROC_ARCFU|CHORISMATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GFDSVRKRMS 10
GF++ RKR S
Sbjct: 248 GFEAARKRGS 257


>sp|DPCKG_SACI4|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GFDSVRKRMS 10
FD++RK +S
Sbjct: 14 AFDNLRKELS 23


>sp|DPCKG_SACI3|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain M.16.27)

Query: 1 GFDSVRKRMS 10
FD++RK +S
Sbjct: 14 AFDNLRKELS 23


>sp|RL14_METST|LARGE ribosomal subunit protein uL14|Methanosphaera stadtmanae (strain

Query: 1 GFDSVRKRMS 10
GF VR+R++
Sbjct: 36 GFKGVRRRLA 45


>sp|DPCKG_SACI7|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GFDSVRKRMS 10
FD++RK +S
Sbjct: 14 AFDNLRKELS 23


>sp|DPCKG_SACI2|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GFDSVRKRMS 10
FD++RK +S
Sbjct: 14 AFDNLRKELS 23


>sp|DPCKG_SACI1|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GFDSVRKRMS 10
FD++RK +S
Sbjct: 14 AFDNLRKELS 23




150|Sequence|746|755|RKRMSVVIRH

>sp|TRPA_METB6|TRYPTOPHAN synthase alpha chain|Methanoregula boonei (strain DSM 21154

Query: 2 KRMSVVIRH 10
+RM ++RH
Sbjct: 158 ERMDTIVRH 166


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 1 RKRMSVVIRH 10
R+ SVV+RH
Sbjct: 322 RRDSSVVVRH 331


>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 2 KRMSVVIR 9
+RMSV++R
Sbjct: 154 RRMSVILR 161




151|Sequence|751|760|VVIRHPLTDE

>sp|IF6_METVS|TRANSLATION initiation factor 6|Methanococcus vannielii (strain ATCC 35089

Query: 5 HPLTDE 10
HPLTDE
Sbjct: 162 HPLTDE 167


>sp|IF6_METM6|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain C6 /

Query: 5 HPLTDE 10
HPLTDE
Sbjct: 162 HPLTDE 167


>sp|IF6_METMP|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain DSM 14266

Query: 5 HPLTDE 10
HPLTDE
Sbjct: 162 HPLTDE 167


>sp|IF6_METM7|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain C7 /

Query: 5 HPLTDE 10
HPLTDE
Sbjct: 162 HPLTDE 167


>sp|IF6_METM5|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain C5 /

Query: 5 HPLTDE 10
HPLTDE
Sbjct: 162 HPLTDE 167


>sp|PYRB_THEAC|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma acidophilum

Query: 1 VVIRHPL 7
+VIRHPL
Sbjct: 103 IVIRHPL 109


>sp|PYRB_ARCFU|ASPARTATE carbamoyltransferase catalytic subunit|Archaeoglobus fulgidus

Query: 1 VVIRHPL 7
+VIRHPL
Sbjct: 101 IVIRHPL 107


>sp|TAL_THEVO|PROBABLE transaldolase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VVIRHPLTDE 10
++I+HP TDE
Sbjct: 194 LLIKHPKTDE 203


>sp|PYRB_PICTO|ASPARTATE carbamoyltransferase catalytic subunit|Picrophilus torridus (strain

Query: 1 VVIRHPL 7
+V+RHPL
Sbjct: 103 IVVRHPL 109


>sp|PYRB_THEVO|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma volcanium

Query: 1 VVIRHPL 7
+VIRHPL
Sbjct: 103 IVIRHPL 109


>sp|VHUB_METJA|POLYFERREDOXIN protein VhuB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HPLTDE 10
HP+TDE
Sbjct: 265 HPITDE 270


>sp|HTPX1_METAC|PROTEASE HtpX homolog 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 HPLTDE 10
HP+TDE
Sbjct: 271 HPVTDE 276


>sp|HTPX1_METMA|PROTEASE HtpX homolog 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 HPLTDE 10
HP+TDE
Sbjct: 272 HPVTDE 277


>sp|PYRB_THEKO|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus kodakarensis

Query: 1 VVIRHPL 7
+VIRHP+
Sbjct: 104 IVIRHPM 110


>sp|PYRB_THEGJ|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus gammatolerans

Query: 1 VVIRHPL 7
+VIRHP+
Sbjct: 104 IVIRHPM 110


>sp|PYRB_THEON|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus onnurineus

Query: 1 VVIRHPL 7
+VIRHP+
Sbjct: 104 IVIRHPM 110


>sp|TAL_THEAC|PROBABLE transaldolase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VIRHPLTDE 10
+++HP TDE
Sbjct: 195 LMKHPKTDE 203


>sp|PYRB_METBF|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina barkeri

Query: 1 VVIRHPL 7
+V+RHPL
Sbjct: 104 IVLRHPL 110


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 1 VVIRHPLTD 9
V+IR PL+D
Sbjct: 210 VIIRPPLSD 218


>sp|RELE4_METJA|PUTATIVE toxin RelE4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IRHPLTD 9
+RHPL D
Sbjct: 45 LRHPLND 51


>sp|PYRB_CENSY|ASPARTATE carbamoyltransferase catalytic subunit|Cenarchaeum symbiosum

Query: 1 VVIRHPL 7
+V+RHPL
Sbjct: 104 LVLRHPL 110


>sp|PYRB_METAC|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina acetivorans

Query: 1 VVIRHPL 7
+V+RHPL
Sbjct: 104 IVLRHPL 110


>sp|RL2_METAC|LARGE ribosomal subunit protein uL2|Methanosarcina acetivorans (strain

Query: 3 IRHPLTDE 10
+RHP DE
Sbjct: 28 LRHPRVDE 35


>sp|PYRB_METMA|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina mazei (strain

Query: 1 VVIRHPL 7
+V+RHPL
Sbjct: 105 IVLRHPL 111


>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VVIRHPLT 8
VV+R PLT
Sbjct: 286 VVLREPLT 293


>sp|RL2_METMA|LARGE ribosomal subunit protein uL2|Methanosarcina mazei (strain ATCC

Query: 3 IRHPLTDE 10
+RHP DE
Sbjct: 28 LRHPRVDE 35


>sp|RL2_METBF|LARGE ribosomal subunit protein uL2|Methanosarcina barkeri (strain

Query: 3 IRHPLTDE 10
+RHP DE
Sbjct: 28 LRHPRVDE 35


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 HPLTDE 10
HPL DE
Sbjct: 288 HPLADE 293


>sp|PYRB_METVS|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus vannielii

Query: 1 VVIRHP 6
+VIRHP
Sbjct: 100 IVIRHP 105


>sp|PYRB_NITMS|ASPARTATE carbamoyltransferase catalytic subunit|Nitrosopumilus maritimus

Query: 1 VVIRHPL 7
+V+RHPL
Sbjct: 104 MVLRHPL 110


>sp|PYRB_PYRFU|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus furiosus (strain

Query: 1 VVIRHP 6
+VIRHP
Sbjct: 104 IVIRHP 109


>sp|PYRB_PYRHO|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus horikoshii

Query: 1 VVIRHP 6
+VIRHP
Sbjct: 104 IVIRHP 109


>sp|HIS8_THEKO|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VVIRHP 6
VV+RHP
Sbjct: 245 VVLRHP 250


>sp|PYRB_PYRAB|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus abyssi (strain

Query: 1 VVIRHP 6
+VIRHP
Sbjct: 104 IVIRHP 109


>sp|TAL_META3|PROBABLE transaldolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VIRHPLTDE 10
+ HPLTD+
Sbjct: 192 MFNHPLTDK 200


>sp|TAL_METJA|PROBABLE transaldolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VIRHPLTD 9
+ HPLTD
Sbjct: 192 LFNHPLTD 199


>sp|PYRB_METTP|ASPARTATE carbamoyltransferase catalytic subunit|Methanothrix

Query: 1 VVIRHP 6
+VIRHP
Sbjct: 102 IVIRHP 107


>sp|TAL_METMP|PROBABLE transaldolase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VIRHPLTD 9
+ HPLTD
Sbjct: 192 LFNHPLTD 199


>sp|TAL_METM5|PROBABLE transaldolase|Methanococcus maripaludis (strain C5 /

Query: 2 VIRHPLTD 9
+ HPLTD
Sbjct: 192 LFNHPLTD 199


>sp|HPRT_FERPA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Ferroglobus placidus (strain DSM 10642

Query: 5 HPLTD 9
HPLTD
Sbjct: 25 HPLTD 29


>sp|TAL_METM7|PROBABLE transaldolase|Methanococcus maripaludis (strain C7 /

Query: 2 VIRHPLTD 9
+ HPLTD
Sbjct: 192 LFNHPLTD 199


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 VIRHPLTDE 10
V+RHP T E
Sbjct: 423 VLRHPSTRE 431


>sp|TYSY_METMA|PUTATIVE thymidylate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VVIRHPLTD 9
VVI +P TD
Sbjct: 50 VVIENPYTD 58


>sp|TYSY_METAC|PUTATIVE thymidylate synthase|Methanosarcina acetivorans (strain ATCC

Query: 1 VVIRHPLTD 9
VVI +P TD
Sbjct: 50 VVIENPYTD 58


>sp|COFC_HALWD|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VVIRHP 6
+V+RHP
Sbjct: 225 IVVRHP 230


>sp|RPO11_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus shibatae (strain ATCC

Query: 5 HPLTDE 10
HPLTD+
Sbjct: 47 HPLTDK 52


>sp|RPO11_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 5 HPLTDE 10
HPLTD+
Sbjct: 47 HPLTDK 52


>sp|RPO11_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 5 HPLTDE 10
HPLTD+
Sbjct: 47 HPLTDK 52


>sp|RPO11_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 5 HPLTDE 10
HPLTD+
Sbjct: 47 HPLTDK 52


>sp|RPO11_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 5 HPLTDE 10
HPLTD+
Sbjct: 47 HPLTDK 52


>sp|RPO11_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 5 HPLTDE 10
HPLTD+
Sbjct: 47 HPLTDK 52


>sp|RPO11_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 5 HPLTDE 10
HPLTD+
Sbjct: 47 HPLTDK 52




152|Sequence|756|765|PLTDEINVYT

>sp|SYTC_SACS2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 PLTDEINVY 9
P+TDE+N Y
Sbjct: 445 PITDEVNEY 453


>sp|SYTC_SACI7|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 PLTDEINVY 9
P+TDE+N Y
Sbjct: 445 PITDEVNEY 453


>sp|SYTC_SACI1|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 PLTDEINVY 9
P+TDE+N Y
Sbjct: 445 PITDEVNEY 453


>sp|SYTC_SACI2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 1 PLTDEINVY 9
P+TDE+N Y
Sbjct: 445 PITDEVNEY 453


>sp|SYTC_SACI3|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 PLTDEINVY 9
P+TDE+N Y
Sbjct: 445 PITDEVNEY 453


>sp|SYTC_SACI4|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PLTDEINVY 9
P+TDE+N Y
Sbjct: 445 PITDEVNEY 453


>sp|SYTC_SACI6|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PLTDEINVY 9
P+TDE+N Y
Sbjct: 445 PITDEVNEY 453


>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PLTDEINVY 9
P+TDEI Y
Sbjct: 449 PITDEIEDY 457


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 PLTDEINVYT 10
PL+D++N+ T
Sbjct: 374 PLSDDVNLST 383


>sp|CISY_SACS2|CITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PLTDEIN 7
P TDEIN
Sbjct: 165 PTTDEIN 171


>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 3 TDEINVY 9
TD+INVY
Sbjct: 55 TDKINVY 61


>sp|FEN_CALMQ|FLAP endonuclease 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 PLTDEINV 8
P+T E+NV
Sbjct: 293 PVTQEVNV 300


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PLTDEINV 8
PL D++N+
Sbjct: 641 PLADDVNI 648


>sp|DNLI_METBU|DNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LTDEINV 8
LTD++NV
Sbjct: 391 LTDDVNV 397


>sp|FSX1_UNCAX|FUSEXIN 1|Uncultured archaeon

Query: 3 TDEINVY 9
TDEI++Y
Sbjct: 52 TDEIDIY 58


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DEINVYT 10
DE+ VYT
Sbjct: 350 DEVKVYT 356




153|Sequence|761|770|INVYTKGADS

>sp|RPIA_AERPE|RIBOSE-5-PHOSPHATE isomerase A|Aeropyrum pernix (strain ATCC 700893

Query: 1 INVYTKGAD 9
+NVY GAD
Sbjct: 80 VNVYVDGAD 88


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 INVYTKGAD 9
+ VYT GAD
Sbjct: 842 VTVYTGGAD 850


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 1 INVYTKGADS 10
++VYTKG ++
Sbjct: 224 VDVYTKGKEA 233


>sp|HIS7_PYRAR|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 INVYTKGAD 9
+++Y +GAD
Sbjct: 144 VHIYARGAD 152


>sp|DEOC_AERPE|DEOXYRIBOSE-PHOSPHATE aldolase|Aeropyrum pernix (strain ATCC 700893

Query: 3 VYTKGAD 9
VYTKG D
Sbjct: 172 VYTKGGD 178


>sp|SODF_AERPE|SUPEROXIDE dismutase [Mn/Fe]|Aeropyrum pernix (strain ATCC 700893

Query: 2 NVYTKGADS 10
N Y KGA++
Sbjct: 37 NTYVKGANA 45


>sp|TPIS_PYRAE|TRIOSEPHOSPHATE isomerase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 INVYTKGAD 9
I VY +GAD
Sbjct: 57 IPVYAQGAD 65


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 INVYTKGADS 10
++VYT+G ++
Sbjct: 226 VDVYTRGKEA 235


>sp|ARGDC_SULAC|ARGININE decarboxylase proenzyme|Sulfolobus acidocaldarius (strain ATCC

Query: 1 INVYTKGADS 10
++VYT G DS
Sbjct: 93 LDVYTCGVDS 102


>sp|TPIS_THETK|TRIOSEPHOSPHATE isomerase|Thermoproteus tenax (strain ATCC 35583

Query: 1 INVYTKGAD 9
I VY +GAD
Sbjct: 57 IPVYAQGAD 65


>sp|ARGDC_METS5|ARGININE decarboxylase proenzyme|Metallosphaera sedula (strain ATCC 51363

Query: 1 INVYTKGADS 10
++VYT G DS
Sbjct: 91 LDVYTCGEDS 100


>sp|ARGDC_HYPBU|ARGININE decarboxylase proenzyme|Hyperthermus butylicus (strain DSM 5456

Query: 1 INVYTKGADS 10
++VYT GA+S
Sbjct: 96 VDVYTCGANS 105


>sp|ARGDC_SACS2|ARGININE decarboxylase proenzyme|Saccharolobus solfataricus (strain ATCC

Query: 1 INVYTKGADS 10
++VYT G DS
Sbjct: 97 LDVYTCGEDS 106


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 3 VYTKGADS 10
VYT G+DS
Sbjct: 387 VYTGGSDS 394


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 3 VYTKGADS 10
VYT G+DS
Sbjct: 387 VYTGGSDS 394


>sp|TPIS_PYRIL|TRIOSEPHOSPHATE isomerase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 INVYTKGAD 9
I VY +GAD
Sbjct: 57 IPVYAQGAD 65


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 INVYTKG 7
IN+YT G
Sbjct: 261 INIYTHG 267


>sp|ARGDC_SACI7|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 INVYTKGADS 10
++VYT G DS
Sbjct: 97 LDVYTCGEDS 106


>sp|ARGDC_SACI6|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 1 INVYTKGADS 10
++VYT G DS
Sbjct: 97 LDVYTCGEDS 106


>sp|ARGDC_SACI4|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain M.14.25 /

Query: 1 INVYTKGADS 10
++VYT G DS
Sbjct: 97 LDVYTCGEDS 106


>sp|ARGDC_SACI3|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain M.16.27)

Query: 1 INVYTKGADS 10
++VYT G DS
Sbjct: 97 LDVYTCGEDS 106


>sp|ARGDC_SACI2|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 INVYTKGADS 10
++VYT G DS
Sbjct: 97 LDVYTCGEDS 106


>sp|ARGDC_SACI1|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 INVYTKGADS 10
++VYT G DS
Sbjct: 97 LDVYTCGEDS 106


>sp|Y805_METJA|UNCHARACTERIZED protein MJ0805|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 INVYTKGAD 9
INV +KGA+
Sbjct: 169 INVKSKGAE 177




154|Sequence|766|775|KGADSVVMDL

>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GADSVVMDL 10
GAD+VVMD+
Sbjct: 272 GADNVVMDI 280


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GADSVVMDL 10
GAD+VVMD+
Sbjct: 273 GADNVVMDI 281


>sp|TOP6A_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KGADSVVMDL 10
K +DSV+MD+
Sbjct: 131 KESDSVIMDI 140


>sp|Y1069_METJA|UNCHARACTERIZED glycosyltransferase MJ1069|Methanocaldococcus jannaschii (strain

Query: 1 KGADSVVMD 9
+GAD VV+D
Sbjct: 322 EGADEVVID 330


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GADSVVMDL 10
GA++VVMD+
Sbjct: 272 GAENVVMDI 280


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GADSVVMDL 10
GAD VVMD+
Sbjct: 273 GADHVVMDI 281


>sp|AMPPA_METTP|AMP phosphorylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GADSVVMDL 10
GAD+VV+D+
Sbjct: 271 GADAVVVDM 279


>sp|RL18_METS3|LARGE ribosomal subunit protein uL18|Methanobrevibacter smithii (strain

Query: 1 KGADSVVMDL 10
KG DS ++D+
Sbjct: 96 KGVDSAILDI 105


>sp|NTPTH_PYRHO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KGADSVVMD 9
+GAD +V+D
Sbjct: 94 RGADLIVID 102


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GADSVVMDL 10
GAD++V+D+
Sbjct: 273 GADTMVLDI 281


>sp|AROE_METMP|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain DSM 14266

Query: 4 DSVVMDL 10
D+VVMDL
Sbjct: 216 DAVVMDL 222


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 KGADSVVMDL 10
KGA V++DL
Sbjct: 402 KGAPQVILDL 411


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 1 KGADSVVM 8
KGA++VVM
Sbjct: 112 KGANAVVM 119


>sp|AROE_META3|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus aeolicus (strain ATCC

Query: 4 DSVVMDL 10
D+VVMDL
Sbjct: 216 DAVVMDL 222




155|Sequence|771|780|VVMDLLQPCS

>sp|OFOB1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 2 VMDLLQPC 9
V+D+LQPC
Sbjct: 194 VIDVLQPC 201


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 2 VMDLLQPC 9
++D+LQPC
Sbjct: 190 LVDILQPC 197


>sp|OFOB2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 2 VMDLLQPC 9
++D+LQPC
Sbjct: 193 LVDILQPC 200


>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 2 VMDLLQPC 9
++D+LQPC
Sbjct: 190 LIDVLQPC 197


>sp|OFOB1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 2 VMDLLQPC 9
++D+LQPC
Sbjct: 190 LIDVLQPC 197


>sp|OFOB_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Saccharolobus solfataricus (Sulfolobus

Query: 2 VMDLLQPC 9
++D+LQPC
Sbjct: 190 MIDVLQPC 197


>sp|HEM1_HALSA|GLUTAMYL-TRNA reductase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VVMDLLQP 8
VV+DL QP
Sbjct: 266 VVVDLAQP 273


>sp|HEM1_HALS3|GLUTAMYL-TRNA reductase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VVMDLLQP 8
VV+DL QP
Sbjct: 266 VVVDLAQP 273




156|Sequence|776|785|LQPCSSVDAR

>sp|PURP_METMP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain DSM

Query: 3 PCSSVD 8
PCSSV+
Sbjct: 168 PCSSVE 173


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 LQPCSSVDA 9
+ PC S+D
Sbjct: 354 ITPCDSIDG 362




157|Sequence|781|790|SVDARGRHQK

>sp|RS8E_HALMA|SMALL ribosomal subunit protein eS8|Haloarcula marismortui (strain ATCC

Query: 1 SVDARGRHQK 10
+VD+RG QK
Sbjct: 43 TVDSRGNTQK 52


>sp|AROA_HALSA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 SVDARGRHQ 9
SVD RG H+
Sbjct: 387 SVDGRGDHR 395


>sp|AROA_HALS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 SVDARGRHQ 9
SVD RG H+
Sbjct: 378 SVDGRGDHR 386


>sp|ASPD_ARCFU|L-ASPARTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VDARGRHQK 10
+D RG H+K
Sbjct: 30 LDVRGEHEK 38


>sp|ASPGP_PYRCJ|PLANT-TYPE L-asparaginase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 VDARGRH 8
VDARGR
Sbjct: 270 VDARGRF 276


>sp|RL2_PYRAR|LARGE ribosomal subunit protein uL2|Pyrobaculum arsenaticum (strain DSM

Query: 2 VDARGR 7
VDARGR
Sbjct: 150 VDARGR 155


>sp|RL2_PYRNV|LARGE ribosomal subunit protein uL2|Pyrobaculum neutrophilum (strain DSM

Query: 2 VDARGR 7
VDARGR
Sbjct: 149 VDARGR 154


>sp|KAE1B_HALSA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 SVDARGRHQ 9
+V+ RGR+Q
Sbjct: 518 AVEGRGRYQ 526


>sp|RL2_PYRCJ|LARGE ribosomal subunit protein uL2|Pyrobaculum calidifontis (strain DSM

Query: 2 VDARGR 7
VDARGR
Sbjct: 148 VDARGR 153




158|Sequence|786|795|GRHQKKIRSK

>sp|COBS_METAC|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GRHQKKIRS 9
G H+KKI++
Sbjct: 95 GSHEKKIKA 103


>sp|AMPPA_METTP|AMP phosphorylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GRHQKKIRS 9
G HQK+I S
Sbjct: 409 GEHQKQILS 417


>sp|SPSS_METTH|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GRHQKK 6
GRH+KK
Sbjct: 240 GRHEKK 245




159|Sequence|791|800|KIRSKTQNYL

>sp|SPSS2_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KIRSKTQNYL 10
+IRS+ +NY+
Sbjct: 69 EIRSREENYI 78


>sp|Y017_METJA|UNCHARACTERIZED protein MJ0017|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SKTQNYL 10
SKT+NYL
Sbjct: 114 SKTRNYL 120


>sp|Y1466_METJA|UNCHARACTERIZED protein MJ1466|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SKTQNYL 10
SKT+NYL
Sbjct: 114 SKTRNYL 120


>sp|GLCAE_SULAC|D-GLUCOSAMINE-6-PHOSPHATE 4-epimerase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KIRSKTQNYL 10
KIR +T N L
Sbjct: 294 KIRERTHNLL 303


>sp|YC9A_METJA|UNCHARACTERIZED protein MJ1292.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KIRSKTQNYL 10
KIR++TQ ++
Sbjct: 33 KIRNRTQGFV 42




160|Sequence|796|805|TQNYLNVYAA

>sp|KTHY_METMJ|PROBABLE thymidylate kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 QNYLNVYAA 10
+NYLN+ AA
Sbjct: 159 ENYLNLAAA 167


>sp|Y1020_METJA|UNCHARACTERIZED protein MJ1020|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QNYLNVYA 9
+NY++VYA
Sbjct: 238 KNYVSVYA 245


>sp|IF2B_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 2 QNYLNVY 8
QNY+N Y
Sbjct: 96 QNYVNEY 102


>sp|IF2B_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 2 QNYLNVY 8
QNY+N Y
Sbjct: 96 QNYVNEY 102


>sp|IF2B_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7 /

Query: 2 QNYLNVY 8
QNY+N Y
Sbjct: 96 QNYVNEY 102


>sp|IF2B_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6 /

Query: 2 QNYLNVY 8
QNY+N Y
Sbjct: 96 QNYVNEY 102


>sp|IF2B_METM5|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C5 /

Query: 2 QNYLNVY 8
QNY+N Y
Sbjct: 96 QNYVNEY 102


>sp|AGLB1_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QNYLNVY 8
QNYLN Y
Sbjct: 449 QNYLNPY 455




161|Sequence|801|810|NVYAAEGLRT

>sp|PORA_METTM|PYRUVATE synthase subunit PorA|Methanothermobacter marburgensis (strain

Query: 2 VYAAEGLR 9
VYAA GLR
Sbjct: 91 VYAAAGLR 98


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VYAAEGLRT 10
+YA +GLRT
Sbjct: 80 IYAKKGLRT 88


>sp|PORA_METTH|PYRUVATE synthase subunit PorA|Methanothermobacter thermautotrophicus

Query: 2 VYAAEGLR 9
VYAA GLR
Sbjct: 91 VYAAAGLR 98


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 NVYAAEGLR 9
+VY AEG++
Sbjct: 292 DVYVAEGIK 300


>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 3 YAAEGL 8
YAAEGL
Sbjct: 67 YAAEGL 72


>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NVYAAEGLR 9
+VY AEG++
Sbjct: 292 DVYVAEGIK 300


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NVYAAEGLR 9
+VY AEG++
Sbjct: 292 DVYVAEGIK 300


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 2 VYAAEGLR 9
VYAA G+R
Sbjct: 310 VYAAAGVR 317


>sp|KHSE_PYRNV|HOMOSERINE kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 YAAEGLR 9
YA EGLR
Sbjct: 275 YAEEGLR 281


>sp|KHSE_PYRAE|HOMOSERINE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 YAAEGLR 9
YA EGLR
Sbjct: 275 YAEEGLR 281


>sp|KHSE_PYRCJ|HOMOSERINE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 YAAEGLRT 10
YA EGLR
Sbjct: 275 YAEEGLRA 282


>sp|FTHS_THEAC|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NVYAAEGL 8
NVY A+G+
Sbjct: 435 NVYGADGV 442


>sp|RL2_PYRNV|LARGE ribosomal subunit protein uL2|Pyrobaculum neutrophilum (strain

Query: 3 YAAEGL 8
YAAEGL
Sbjct: 68 YAAEGL 73


>sp|RL2_PYRCJ|LARGE ribosomal subunit protein uL2|Pyrobaculum calidifontis (strain

Query: 3 YAAEGL 8
YAAEGL
Sbjct: 67 YAAEGL 72


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 1 NVYAAEGLR 9
VYAA G+R
Sbjct: 311 RVYAAAGVR 319


>sp|FTHS_THEVO|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NVYAAEGL 8
NVY A+G+
Sbjct: 435 NVYGADGV 442




162|Sequence|806|815|EGLRTLCIAK

>sp|PURP_IGNH4|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Ignicoccus hospitalis (strain KIN4/I

Query: 1 EGLRTLCIAK 10
EGLRTL I K
Sbjct: 35 EGLRTLLIVK 44


>sp|GATA_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Saccharolobus solfataricus (strain

Query: 1 EGLRTLCIAK 10
EG+RT C +K
Sbjct: 78 EGIRTTCASK 87


>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 EGLRTLC 7
EGLR LC
Sbjct: 298 EGLRVLC 304


>sp|PURP_ARCFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Archaeoglobus fulgidus (strain ATCC

Query: 1 EGLRTLCIAK 10
EG T+CI +
Sbjct: 40 EGFSTVCICR 49


>sp|PURP_PYRAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum arsenaticum (strain DSM

Query: 2 GLRTLCIAK 10
G RT+ IAK
Sbjct: 34 GFRTIAIAK 42


>sp|DGGGP_NATPD|DIGERANYLGERANYLGLYCERYL phosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EGLRTLCI 8
EGLRTL I
Sbjct: 186 EGLRTLPI 193


>sp|GATA_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Haloarcula marismortui (strain ATCC

Query: 1 EGLRTLC 7
EG+RT C
Sbjct: 35 EGVRTTC 41


>sp|GATA_CENSY|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Cenarchaeum symbiosum (strain A)

Query: 2 GLRTLCIAK 10
G+RT C +K
Sbjct: 81 GMRTTCASK 89


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 2 GLRTLCIAK 10
G RT CI K
Sbjct: 760 GFRTNCILK 768


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 GLRTLCIAK 10
G+RTL +AK
Sbjct: 399 GVRTLDVAK 407


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 2 GLRTLCIAK 10
G+RTL +AK
Sbjct: 399 GVRTLDVAK 407




163|Sequence|811|820|LCIAKRVLSK

>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 LCIAKRVLSK 10
+C+ KR+LSK
Sbjct: 776 ICMIKRILSK 785


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LCIAKRVL 8
LC+AKR L
Sbjct: 275 LCLAKRFL 282




164|Sequence|816|825|RVLSKEEYAC

>sp|SYH_SACSH|HISTIDINE--TRNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 RVLSKEEY 8
R+L KEEY
Sbjct: 354 RILRKEEY 361


>sp|SYH_SACI7|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RVLSKEEY 8
R+L KEEY
Sbjct: 354 RILRKEEY 361


>sp|SYH_SACI6|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RVLSKEEY 8
R+L KEEY
Sbjct: 354 RILRKEEY 361


>sp|SYH_SACI4|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RVLSKEEY 8
R+L KEEY
Sbjct: 354 RILRKEEY 361


>sp|SYH_SACI2|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RVLSKEEY 8
R+L KEEY
Sbjct: 354 RILRKEEY 361


>sp|SYH_SACI1|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RVLSKEEY 8
R+L KEEY
Sbjct: 354 RILRKEEY 361


>sp|SYH_SACI3|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 RVLSKEEY 8
R+L KEEY
Sbjct: 354 RILRKEEY 361


>sp|CBIM_METST|PUTATIVE cobalt transport protein CbiM|Methanosphaera stadtmanae (strain

Query: 1 RVLSKEE 7
RV+SKEE
Sbjct: 214 RVISKEE 220


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 5 KEEYAC 10
KEEY C
Sbjct: 193 KEEYEC 198


>sp|Y2387_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 4 SKEEYAC 10
SK+EY+C
Sbjct: 243 SKKEYSC 249


>sp|RPO5_THESM|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermococcus sibiricus (strain DSM

Query: 1 RVLSKEE 7
RVLSKEE
Sbjct: 19 RVLSKEE 25


>sp|Y1602_METBF|UNCHARACTERIZED protein Mbar_A1602|Methanosarcina barkeri (strain Fusaro /

Query: 2 VLSKEEYAC 10
+ K+EY C
Sbjct: 201 IFPKDEYVC 209


>sp|ACDE_METJA|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanocaldococcus

Query: 3 LSKEEY 8
LSKEEY
Sbjct: 131 LSKEEY 136


>sp|SYFA_PYRFU|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RVLSKEEYA 9
++LS++EYA
Sbjct: 144 KILSEKEYA 152




165|Sequence|821|830|EEYACWLQSH

>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 YACWLQSH 10
YA W++SH
Sbjct: 120 YALWIRSH 127


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 1 EEYACWLQSH 10
+EY C +Q H
Sbjct: 109 KEYVCLMQVH 118


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 YACWLQSH 10
YA W++SH
Sbjct: 120 YALWVRSH 127


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 YACWLQSH 10
YA W++SH
Sbjct: 120 YALWVRSH 127


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EEYACW 6
E+Y CW
Sbjct: 282 EQYRCW 287


>sp|TRUB_SACS2|PROBABLE tRNA pseudouridine synthase B|Saccharolobus solfataricus (strain

Query: 1 EEYACWLQSH 10
+EY C +Q H
Sbjct: 21 KEYVCVMQVH 30


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC 700893

Query: 1 EEYACWLQSH 10
+EY C +Q H
Sbjct: 118 KEYVCVMQLH 127


>sp|SPEE1_HYPBU|POLYAMINE aminopropyltransferase 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 EEYACWLQS 9
EEY W+ S
Sbjct: 224 EEYGVWVPS 232


>sp|K6PF_THEKO|ADP-SPECIFIC phosphofructokinase|Thermococcus kodakarensis (strain ATCC

Query: 1 EEYACWLQSH 10
EE W SH
Sbjct: 83 EELQAWFDSH 92


>sp|TRUB_METBF|PROBABLE tRNA pseudouridine synthase B|Methanosarcina barkeri (strain Fusaro

Query: 1 EEYACWLQSH 10
+EY C L+ H
Sbjct: 104 KEYVCLLKLH 113


>sp|SYP_METS3|PROLINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 YACWLQSH 10
Y+ W++SH
Sbjct: 111 YSLWIRSH 118


>sp|Y1800_ARCFU|PUTATIVE transport protein AF_1800|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEYACWLQSH 10
EEY W+ S+
Sbjct: 110 EEYVKWITSN 119


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 3 YACWL 7
Y CWL
Sbjct: 119 YPCWL 123


>sp|GGR3_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 3|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EEYACWLQSH 10
+EYA ++ SH
Sbjct: 325 QEYADYIDSH 334


>sp|TRUB_METAC|PROBABLE tRNA pseudouridine synthase B|Methanosarcina acetivorans (strain

Query: 1 EEYACWLQSH 10
+EY C L+ H
Sbjct: 104 KEYVCHLKLH 113


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EYACWLQSH 10
E A WL+SH
Sbjct: 452 EVAEWLESH 460


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 1 EEYACWLQ 8
E+Y WL+
Sbjct: 443 EDYGAWLK 450


>sp|SYP_METKA|PROLINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 YACWLQSH 10
+A W++SH
Sbjct: 128 FALWIRSH 135


>sp|CYAS_METB6|CYSTEATE synthase|Methanoregula boonei (strain DSM 21154

Query: 3 YACWL 7
Y CWL
Sbjct: 52 YLCWL 56


>sp|TRUB_METMA|PROBABLE tRNA pseudouridine synthase B|Methanosarcina mazei (strain ATCC

Query: 1 EEYACWLQSH 10
+EY C L+ H
Sbjct: 104 KEYICHLKLH 113


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 YACWLQSH 10
+A W++SH
Sbjct: 120 FALWVRSH 127


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 YACWLQSH 10
+A W++SH
Sbjct: 118 FALWIRSH 125


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YACWLQSH 10
+A W++SH
Sbjct: 118 FALWIRSH 125


>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEYACWLQS 9
++YA WL S
Sbjct: 218 DKYAIWLAS 226


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 YACWLQSH 10
Y W++SH
Sbjct: 120 YKLWIRSH 127


>sp|SYP_METTH|PROLINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 YACWLQSH 10
+A W++SH
Sbjct: 126 FALWVRSH 133


>sp|SYP_PYRFU|PROLINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YACWLQSH 10
+A W++SH
Sbjct: 118 FALWIRSH 125




166|Sequence|826|835|WLQSHLEAES

>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WLQSHLE 7
WL++H+E
Sbjct: 715 WLKTHME 721


>sp|MTAD_THEKO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WLQSHL 6
WLQ+H+
Sbjct: 80 WLQNHI 85


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 WLQSHLEAE 9
WL H+E++
Sbjct: 379 WLNGHVESK 387


>sp|AGLB2_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WLQSHLEAE 9
W++ +LEA+
Sbjct: 444 WMKENLEAQ 452


>sp|SYP_CALMQ|PROLINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 WLQSHLEAES 10
WL+SH+ S
Sbjct: 401 WLRSHVRRSS 410




167|Sequence|831|840|LEAESSLENS

***** No hits found ******


168|Sequence|836|845|SLENSEELLF

>sp|PFDA_SULTO|PREFOLDIN subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LENSEELLF 10
L+NS+ELL
Sbjct: 55 LQNSQELLM 63


>sp|GGR1_METKA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanopyrus kandleri (strain AV19 /

Query: 1 SLENSEELL 9
S+EN EE+L
Sbjct: 355 SVENLEEML 363




169|Sequence|841|850|EELLFQSAIR

***** No hits found ******


170|Sequence|846|855|QSAIRLETNL

>sp|PUR2_METS3|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 QSAIRLETN 9
QSA R+ET+
Sbjct: 93 QSAARIETD 101


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 QSAIRLETNL 10
QSA + +TNL
Sbjct: 284 QSAFKYDTNL 293




171|Sequence|851|860|LETNLHLLGA

>sp|DNLI_METM5|DNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 ETNLHLLG 9
E+NLH++G
Sbjct: 475 ESNLHVIG 482


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LETNLHLLG 9
LET L LLG
Sbjct: 551 LETGLELLG 559


>sp|LEUC_PYRCJ|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum calidifontis (strain DSM

Query: 5 LHLLGA 10
LHLLGA
Sbjct: 176 LHLLGA 181


>sp|HIS1_METM7|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 3 TNLHLLGA 10
TNL +LGA
Sbjct: 269 TNLEMLGA 276


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 3 TNLHLLGA 10
+N H+LGA
Sbjct: 562 SNAHILGA 569


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 NLHLLG 9
N+HLLG
Sbjct: 53 NIHLLG 58


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 4 NLHLLG 9
N+HLLG
Sbjct: 51 NIHLLG 56




172|Sequence|856|865|HLLGATGIED

>sp|COFH_METJA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocaldococcus jannaschii (strain

Query: 4 GATGIED 10
GATGIED
Sbjct: 264 GATGIED 270


>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 1 HLLGATGIED 10
HLLG IED
Sbjct: 272 HLLGIGAIED 281


>sp|THIOL_METJA|ACETYL-COA acetyltransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HLLGATGI 8
H LGATGI
Sbjct: 336 HALGATGI 343


>sp|THIOL_METTL|ACETYL-COA acetyltransferase|Methanothermococcus thermolithotrophicus

Query: 1 HLLGATGIE 9
H LGATGI
Sbjct: 336 HALGATGIR 344


>sp|NADB_PYRFU|L-ASPARTATE oxidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LLGATGIED 10
L ATGIED
Sbjct: 266 FLDATGIED 274


>sp|CBID_THEAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LLGATGIED 10
+LG TGIE+
Sbjct: 169 ILGTTGIEE 177


>sp|CBID_SACS2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 LLGATGIE 9
+LG TGIE
Sbjct: 167 ILGTTGIE 174


>sp|CBID_SACI2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LLGATGIE 9
+LG TGIE
Sbjct: 167 ILGTTGIE 174


>sp|CBID_SACI1|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LLGATGIE 9
+LG TGIE
Sbjct: 167 ILGTTGIE 174


>sp|CBID_SACI7|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LLGATGIE 9
+LG TGIE
Sbjct: 167 ILGTTGIE 174


>sp|CBID_SACI6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LLGATGIE 9
+LG TGIE
Sbjct: 167 ILGTTGIE 174


>sp|CBID_SACI4|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LLGATGIE 9
+LG TGIE
Sbjct: 167 ILGTTGIE 174


>sp|CBID_SACI3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 2 LLGATGIE 9
+LG TGIE
Sbjct: 167 ILGTTGIE 174


>sp|THIOL_METTH|ACETYL-COA acetyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 HLLGATGI 8
H LGATGI
Sbjct: 332 HPLGATGI 339


>sp|CBID_SULAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LLGATGIE 9
+LG TGIE
Sbjct: 172 ILGTTGIE 179


>sp|CBID_PYRAE|COBALT-PRECORRIN-5B C(1)-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LLGATGIE 9
+LG TGIE
Sbjct: 162 ILGTTGIE 169


>sp|RNFD_METAC|ION-TRANSLOCATING oxidoreductase complex subunit D|Methanosarcina acetivorans

Query: 2 LLGATGIE 9
+LGA GIE
Sbjct: 52 ILGAVGIE 59


>sp|CBID_THEVO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LLGATGIED 10
+LG TGIE+
Sbjct: 180 VLGTTGIEE 188


>sp|CBID_SULTO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LLGATGIE 9
+LG TGIE
Sbjct: 165 ILGTTGIE 172


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 1 HLLGATGIE 9
HL+G G+E
Sbjct: 180 HLIGDVGVE 188


>sp|GATD_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C5 /

Query: 1 HLLGATGIED 10
HLLG G E+
Sbjct: 388 HLLGNYGFEE 397


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 1 HLLGATGIE 9
HL+G G+E
Sbjct: 180 HLIGDVGVE 188


>sp|RNP2_METAC|RIBONUCLEASE P protein component 2|Methanosarcina acetivorans (strain ATCC

Query: 1 HLLGATG 7
H+LGA+G
Sbjct: 92 HVLGASG 98


>sp|MDH_METMA|MALATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LGATGIED 10
LGA GIE+
Sbjct: 270 LGANGIEE 277


>sp|MDH_METBF|MALATE dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 3 LGATGIED 10
LGA+G+E+
Sbjct: 270 LGASGVEE 277




173|Sequence|861|870|TGIEDRLQDG

>sp|RL10E_THEPD|LARGE ribosomal subunit protein uL16|Thermofilum pendens (strain DSM 2475

Query: 5 DRLQDG 10
DRLQDG
Sbjct: 106 DRLQDG 111


>sp|RL10E_SULTO|LARGE ribosomal subunit protein uL16|Sulfurisphaera tokodaii (strain DSM

Query: 5 DRLQDG 10
DRLQDG
Sbjct: 107 DRLQDG 112


>sp|RL10E_SULAC|LARGE ribosomal subunit protein uL16|Sulfolobus acidocaldarius (strain

Query: 5 DRLQDG 10
DRLQDG
Sbjct: 107 DRLQDG 112


>sp|RL10E_STAMF|LARGE ribosomal subunit protein uL16|Staphylothermus marinus (strain ATCC

Query: 5 DRLQDG 10
DRLQDG
Sbjct: 106 DRLQDG 111


>sp|RL10E_SACS2|LARGE ribosomal subunit protein uL16|Saccharolobus solfataricus (strain

Query: 5 DRLQDG 10
DRLQDG
Sbjct: 107 DRLQDG 112


>sp|RL10E_SACI7|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 5 DRLQDG 10
DRLQDG
Sbjct: 107 DRLQDG 112


>sp|RL10E_SACI6|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 5 DRLQDG 10
DRLQDG
Sbjct: 107 DRLQDG 112


>sp|RL10E_SACI4|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 5 DRLQDG 10
DRLQDG
Sbjct: 107 DRLQDG 112


>sp|RL10E_SACI3|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 5 DRLQDG 10
DRLQDG
Sbjct: 107 DRLQDG 112


>sp|RL10E_SACI2|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 5 DRLQDG 10
DRLQDG
Sbjct: 107 DRLQDG 112


>sp|RL10E_SACI1|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 5 DRLQDG 10
DRLQDG
Sbjct: 107 DRLQDG 112


>sp|RL10E_METS5|LARGE ribosomal subunit protein uL16|Metallosphaera sedula (strain ATCC

Query: 5 DRLQDG 10
DRLQDG
Sbjct: 107 DRLQDG 112


>sp|RL10E_AERPE|LARGE ribosomal subunit protein uL16|Aeropyrum pernix (strain ATCC 700893

Query: 5 DRLQDG 10
DRLQDG
Sbjct: 108 DRLQDG 113


>sp|ACDG_METTH|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanothermobacter

Query: 1 TGIEDRLQD 9
TGIE+R++D
Sbjct: 406 TGIEERVRD 414


>sp|IF5A_THEGJ|TRANSLATION initiation factor 5A|Thermococcus gammatolerans (strain DSM 15229

Query: 1 TGIEDRLQD 9
TG+ED ++D
Sbjct: 103 TGVEDEVKD 111


>sp|TATAT_HALVD|SEC-INDEPENDENT protein translocase protein TatAt|Haloferax volcanii (strain ATCC

Query: 3 IEDRLQD 9
IED LQD
Sbjct: 55 IEDELQD 61


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TGIEDRLQD 9
G+EDRL++
Sbjct: 275 AGMEDRLEN 283




174|Sequence|866|875|RLQDGVPETI

>sp|THYX_SULTO|FLAVIN-DEPENDENT thymidylate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LQDGVPE 8
LQDGVPE
Sbjct: 131 LQDGVPE 137


>sp|HPRT_METTP|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothrix thermoacetophila (strain

Query: 2 LQDGVPET 9
+ DGVPET
Sbjct: 27 ITDGVPET 34


>sp|BACR2_HALS2|ARCHAERHODOPSIN-2 sp. (strain aus-2)

Query: 2 LQDGVPETI 10
L DG PET+
Sbjct: 13 LNDGRPETL 21


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 DGVPETI 10
DG+PET+
Sbjct: 375 DGLPETV 381


>sp|KDPA_THEVO|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Thermoplasma volcanium (strain

Query: 5 GVPETI 10
GVPETI
Sbjct: 213 GVPETI 218


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 2 LQDGVPETI 10
+DG+PET
Sbjct: 63 FEDGLPETF 71


>sp|Y1726_THEGJ|MEMO1 family protein TGAM_1726|Thermococcus gammatolerans (strain DSM

Query: 2 LQDGVPET 9
+DG+PET
Sbjct: 63 FEDGLPET 70


>sp|Y539_PYRAB|MEMO1 family protein PYRAB05390|Pyrococcus abyssi (strain GE5 /

Query: 3 QDGVPET 9
+DG+PET
Sbjct: 64 EDGLPET 70


>sp|Y132_THEON|MEMO1 family protein TON_0132|Thermococcus onnurineus (strain NA1)

Query: 3 QDGVPET 9
+DG+PET
Sbjct: 64 EDGLPET 70


>sp|Y992_IGNH4|MEMO1 family protein Igni_0992|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 QDGVPETI 10
Q+G PET+
Sbjct: 74 QEGAPETV 81


>sp|URE3_HALWD|UREASE subunit gamma|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LQDGVPETI 10
+ DGVPE I
Sbjct: 69 VMDGVPEMI 77


>sp|PSB2_METS5|PROTEASOME subunit beta 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 RLQDGV 6
RLQDGV
Sbjct: 12 RLQDGV 17


>sp|URE3_HALMA|UREASE subunit gamma|Haloarcula marismortui (strain ATCC 43049

Query: 2 LQDGVPETI 10
+ DGVPE I
Sbjct: 69 VMDGVPEMI 77


>sp|CAS8A_METJA|CRISPR-ASSOCIATED protein Cas8a2/Csa4|Methanocaldococcus jannaschii (strain ATCC

Query: 4 DGVPETI 10
DG+P+T+
Sbjct: 129 DGIPKTL 135


>sp|HPRT_METLZ|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocorpusculum labreanum (strain

Query: 2 LQDGVPE 8
L DG+PE
Sbjct: 31 LTDGIPE 37


>sp|CARA_METTH|CARBAMOYL phosphate synthase small chain|Methanothermobacter

Query: 1 RLQDGVPETI 10
L DG PE I
Sbjct: 314 NLNDGTPEGI 323


>sp|PTH_SULAC|PEPTIDYL-TRNA hydrolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LQDGVPETI 10
LQ G+P TI
Sbjct: 75 LQSGLPATI 83


>sp|HPRT_FERPA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Ferroglobus placidus (strain DSM 10642

Query: 2 LQDGVPE 8
L DGVPE
Sbjct: 27 LTDGVPE 33


>sp|MRE11_METMA|DNA double-strand break repair protein|Methanosarcina mazei (strain

Query: 1 RLQDGVPETI 10
R+++G+PE +
Sbjct: 312 RVKEGIPEEV 321


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RLQDGVPETI 10
R+QDGV I
Sbjct: 738 RIQDGVERII 747


>sp|AHBB_METBF|SIROHEME decarboxylase beta subunit|Methanosarcina barkeri (strain Fusaro

Query: 2 LQDGVPET 9
+QDG+P T
Sbjct: 12 VQDGIPIT 19


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 RLQDGVPETI 10
R+QDGV I
Sbjct: 738 RIQDGVERII 747


>sp|COBQ_METAR|PROBABLE cobyric acid synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LQDGVPETI 10
++ G+PETI
Sbjct: 343 IEGGMPETI 351


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RLQDGVPETI 10
R+QDGV I
Sbjct: 738 RIQDGVERII 747


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RLQDGVPETI 10
R+QDGV I
Sbjct: 740 RIQDGVERII 749


>sp|URE3_NATPD|UREASE subunit gamma|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LQDGVPETI 10
+ DGVPE +
Sbjct: 69 VMDGVPELV 77




175|Sequence|871|880|VPETISKLRQ

>sp|HYD2A_PYRFU|SULFHYDROGENASE 2 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VPETISKLRQ 10
VPE++ KLR+
Sbjct: 83 VPESVEKLRE 92


>sp|MOAA_SULAC|PROBABLE GTP 3',8-cyclase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VPETISKLRQ 10
+PE ISKL++
Sbjct: 72 LPEIISKLKE 81


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PETISKLRQ 10
PE + K+RQ
Sbjct: 343 PEDVEKIRQ 351


>sp|GSA_HYPBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Hyperthermus butylicus (strain DSM 5456

Query: 1 VPETISKLRQ 10
V ETI KLR+
Sbjct: 411 VSETIEKLRK 420


>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 1 VPETISKLR 9
VPE + KLR
Sbjct: 383 VPEIVQKLR 391


>sp|RLME_ARCFU|RIBOSOMAL RNA large subunit methyltransferase|Archaeoglobus fulgidus

Query: 1 VPETISKLRQ 10
+PET+ K+R+
Sbjct: 85 LPETLEKIRE 94


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VPETISKL 8
VPE +SKL
Sbjct: 166 VPEEVSKL 173


>sp|PYRF_METTH|OROTIDINE 5'-phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 2 PETISKLRQ 10
PE +S+LR+
Sbjct: 161 PERLSRLRE 169


>sp|Y2183_ARCFU|UNCHARACTERIZED protein AF_2183|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VPETISKL 8
VPE +SKL
Sbjct: 16 VPELLSKL 23


>sp|ARSM_HALSA|ARSENITE methyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PETISKLRQ 10
PE ISK R+
Sbjct: 238 PEMISKARE 246


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 1 VPETISKLRQ 10
+PET K+R+
Sbjct: 87 IPETAYKMRE 96


>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPETISKLRQ 10
V ETI +LRQ
Sbjct: 49 VMETIERLRQ 58


>sp|RADA_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 2 PETISKLRQ 10
PET KLR+
Sbjct: 22 PETARKLRE 30


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 VPETISKL 8
+PE ISKL
Sbjct: 991 IPELISKL 998




176|Sequence|876|885|SKLRQAGLQI

>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KLRQAGLQI 10
+L++AGLQI
Sbjct: 380 QLQRAGLQI 388


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KLRQAGLQI 10
+L++AGLQI
Sbjct: 380 QLQRAGLQI 388


>sp|SECY_PYRAB|PROTEIN translocase subunit SecY|Pyrococcus abyssi (strain GE5 /

Query: 2 KLRQAGLQI 10
+L++AGLQI
Sbjct: 380 QLQRAGLQI 388


>sp|Y2580_AERPE|UNCHARACTERIZED protein APE_2580|Aeropyrum pernix (strain ATCC 700893

Query: 2 KLRQAGLQI 10
K+R+AGL I
Sbjct: 94 KIREAGLNI 102




177|Sequence|881|890|AGLQIWVLTG

>sp|KADA_METIG|ADENYLATE kinase|Methanotorris igneus (Methanococcus igneus)

Query: 1 AGLQIWVL 8
AGL IWVL
Sbjct: 103 AGLPIWVL 110


>sp|Y2093_ARCFU|UNCHARACTERIZED protein AF_2093|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AGLQIWVL 8
AGL+IWV+
Sbjct: 194 AGLKIWVV 201


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 GLQIWV 7
GLQIW+
Sbjct: 438 GLQIWL 443


>sp|Y133_THEAC|PUTATIVE quercetin 2,3-dioxygenase Ta0133|Thermoplasma acidophilum (strain

Query: 1 AGLQIWV 7
AG+Q+W+
Sbjct: 84 AGIQLWL 90


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GLQIWVLT 9
GL+ W+LT
Sbjct: 223 GLKDWILT 230


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LQIWVLTG 10
+ WVLTG
Sbjct: 507 FRTWVLTG 514


>sp|CAS1A_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 QIWVLTG 10
+IW+LTG
Sbjct: 37 RIWILTG 43


>sp|DHYS_METTH|PROBABLE deoxyhypusine synthase|Methanothermobacter thermautotrophicus

Query: 2 GLQIWVLT 9
GLQ+W+ T
Sbjct: 192 GLQLWMYT 199


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 6 WVLTG 10
WVLTG
Sbjct: 247 WVLTG 251


>sp|HTPX_THEGJ|PROTEASE HtpX homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 2 GLQIWVLTG 10
GL++W+ TG
Sbjct: 2 GLEMWLRTG 10


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GLQIWVLTG 10
G+Q ++LTG
Sbjct: 38 GIQAYLLTG 46


>sp|RNZ_PYRIL|RIBONUCLEASE Z|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AGLQIWVLT 9
AGL W LT
Sbjct: 147 AGLPKWALT 155




178|Sequence|886|895|WVLTGDKQET

>sp|OTC_METMJ|ORNITHINE carbamoyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 WVLTGDKQE 9
WV GD+QE
Sbjct: 223 WVSMGDEQE 231


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WVLTGDK 7
WVLTG+K
Sbjct: 510 WVLTGEK 516


>sp|MTXX_METAC|PUTATIVE methyltransferase mtx subunit X|Methanosarcina acetivorans

Query: 2 VLTGDKQE 9
VL GDK+E
Sbjct: 46 VLVGDKKE 53


>sp|MTM1_METJA|TYPE II methyltransferase M.MjaI|Methanocaldococcus jannaschii (strain

Query: 1 WVLTGDKQ 8
W + GDKQ
Sbjct: 208 WEIVGDKQ 215


>sp|OTC_METS3|ORNITHINE carbamoyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 WVLTGDKQE 9
WV GD++E
Sbjct: 222 WVSMGDEKE 230


>sp|LYSY_HALWD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 VLTGDKQ 8
+LTGD+Q
Sbjct: 164 ILTGDEQ 170


>sp|MTIP_METJA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanocaldococcus

Query: 2 VLTGDKQE 9
+L GDK+E
Sbjct: 13 ILKGDKEE 20


>sp|HEM3_METAC|PROBABLE porphobilinogen deaminase|Methanosarcina acetivorans (strain ATCC

Query: 3 LTGDKQE 9
LT DKQE
Sbjct: 244 LTSDKQE 250


>sp|COBS_METJA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 WVLTGDKQE 9
W+ GDK++
Sbjct: 92 WMAVGDKRK 100


>sp|OTC_METST|ORNITHINE carbamoyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 WVLTGDKQE 9
WV GD+ E
Sbjct: 222 WVSMGDEDE 230


>sp|Y356_ARCFU|UNCHARACTERIZED sugar kinase AF_0356|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WVLTGDKQET 10
W+ GD++ T
Sbjct: 180 WIKKGDREVT 189




179|Sequence|891|900|DKQETAVNIA

***** No hits found ******


180|Sequence|896|905|AVNIAYACKL

***** No hits found ******


181|Sequence|901|910|YACKLLDHDE

>sp|HIS2_METBF|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YACKLLDH 8
Y CKLL+H
Sbjct: 28 YVCKLLNH 35


>sp|HIS2_METMA|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YACKLLDH 8
Y CKLL+H
Sbjct: 28 YVCKLLNH 35


>sp|HIS2_METAC|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YACKLLDH 8
Y CKLL+H
Sbjct: 28 YVCKLLNH 35


>sp|HIS2_METBU|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 1 YACKLLDH 8
Y C LLDH
Sbjct: 28 YVCSLLDH 35


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain ATCC

Query: 3 CKLLDHDE 10
C LLD DE
Sbjct: 188 CALLDSDE 195


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.16.4

Query: 3 CKLLDHDE 10
C LLD DE
Sbjct: 188 CALLDSDE 195


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.14.25

Query: 3 CKLLDHDE 10
C LLD DE
Sbjct: 188 CALLDSDE 195


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 CKLLDHDE 10
C LLD DE
Sbjct: 188 CALLDSDE 195


>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 CKLLDHDE 10
C LLD DE
Sbjct: 188 CALLDSDE 195


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 CKLLDHDE 10
C LLD DE
Sbjct: 188 CALLDSDE 195


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 CKLLDHDE 10
C LLD DE
Sbjct: 188 CALLDSDE 195


>sp|RS12_METAR|SMALL ribosomal subunit protein uS12|Methanocella arvoryzae (strain DSM

Query: 1 YACKLLDHD 9
+AC+ L HD
Sbjct: 6 FACRKLVHD 14


>sp|MPTA_METLZ|GTP cyclohydrolase MptA|Methanocorpusculum labreanum (strain ATCC

Query: 4 KLLDHDE 10
KLLDH E
Sbjct: 93 KLLDHHE 99


>sp|RS13_METST|SMALL ribosomal subunit protein uS13|Methanosphaera stadtmanae (strain

Query: 3 CKLLDHDE 10
CK+LD D+
Sbjct: 42 CKVLDLDQ 49


>sp|PRIS_PYRFU|DNA primase small subunit PriS|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ACKLLDHDE 10
A K+LDH E
Sbjct: 232 AKKILDHKE 240


>sp|Y054_METJA|UNCHARACTERIZED protein MJ0054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CKLLDHDE 10
CK L++DE
Sbjct: 182 CKSLENDE 189


>sp|Y305_METJA|UNCHARACTERIZED protein MJ0305|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ACKLLDHD 9
AC++++H+
Sbjct: 161 ACEIIEHE 168




182|Sequence|906|915|LDHDEEVITL

>sp|SYH_AERPE|HISTIDINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LDHDEEVITL 10
LDH EE+++L
Sbjct: 248 LDHLEEMLSL 257


>sp|RS12_SACS2|SMALL ribosomal subunit protein uS12|Saccharolobus solfataricus (strain

Query: 2 DHDEEVIT 9
+HDE +IT
Sbjct: 99 EHDEVIIT 106


>sp|SYFB_THEAC|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LDHDEEV 7
+DHDEE+
Sbjct: 34 VDHDEEL 40


>sp|KPRS_PYRHO|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LDHDEEVITL 10
L+H EEVI +
Sbjct: 42 LEHGEEVIVV 51


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 LDHDEEVI 8
++HDEE I
Sbjct: 554 VEHDEETI 561


>sp|PRIS_PYRFU|DNA primase small subunit PriS|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LDHDEEV 7
LDH EE+
Sbjct: 236 LDHKEEI 242


>sp|SYH_KORCO|HISTIDINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LDHDEEVITL 10
LDH EE+ ++
Sbjct: 242 LDHLEEIFSI 251


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LDHDEEVI 8
LDH++E++
Sbjct: 203 LDHNQEIV 210


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain DSM

Query: 1 LDHDEEVIT 9
LDH E++T
Sbjct: 202 LDHHPEIVT 210




183|Sequence|911|920|EVITLNATSQ

>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EVITLNATSQ 10
EVI LNA+ Q
Sbjct: 75 EVIELNASDQ 84


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EVITLNA 7
EVITLNA
Sbjct: 186 EVITLNA 192


>sp|RFCL_METMJ|REPLICATION factor C large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 EVITLNATSQ 10
EV+ LNA+ Q
Sbjct: 63 EVVELNASDQ 72


>sp|ENDA_METTH|TRNA-SPLICING endonuclease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EVITLNATS 9
EV+T+ ATS
Sbjct: 10 EVVTIKATS 18


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 EVITLNATSQ 10
EVI LNA+ Q
Sbjct: 70 EVIELNASDQ 79


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 EVITLNATSQ 10
EV+ LNA+ Q
Sbjct: 63 EVVELNASDQ 72




184|Sequence|916|925|NATSQEACAA

***** No hits found ******


185|Sequence|921|930|EACAALLDQC

>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 2 ACAALLDQ 9
AC A+LDQ
Sbjct: 149 ACGAMLDQ 156


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 4 AALLDQC 10
AALLD+C
Sbjct: 240 AALLDEC 246


>sp|BIOD_HALMT|ATP-DEPENDENT dethiobiotin synthetase BioD|Haloferax mediterranei (strain ATCC

Query: 1 EACAALLDQ 9
E CAA LD+
Sbjct: 96 ETCAAALDR 104




186|Sequence|926|935|LLDQCLCYVQ

>sp|Y351_METJA|UNCHARACTERIZED protein MJ0351|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLDQCLCYV 9
L+++C CY+
Sbjct: 52 LVNRCQCYI 60


>sp|Y1187_METJA|UNCHARACTERIZED protein MJ1187|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLDQCLCYVQ 10
LLD+C Y++
Sbjct: 182 LLDECYNYIK 191


>sp|KAD6_METJA|PUTATIVE adenylate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLDQCLC 7
+LD CLC
Sbjct: 119 ILDVCLC 125


>sp|AATE_STAMF|A-TYPE ATP synthase subunit E|Staphylothermus marinus (strain ATCC 43588

Query: 1 LLDQCLCYVQ 10
LLD+ L Y++
Sbjct: 111 LLDEALYYIE 120




187|Sequence|931|940|LCYVQSRGLQ

>sp|PYRB_PYRNV|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum neutrophilum

Query: 3 YVQSRGLQ 10
YVQSRGL+
Sbjct: 198 YVQSRGLK 205


>sp|PYRB_PYRIL|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum islandicum

Query: 3 YVQSRGL 9
Y+QSRGL
Sbjct: 198 YIQSRGL 204


>sp|PYRB_PYRAE|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum aerophilum

Query: 3 YVQSRGLQ 10
Y+QSRG++
Sbjct: 198 YIQSRGMK 205


>sp|PYRB_PYRAR|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum arsenaticum

Query: 1 LCYVQSRGLQ 10
L YV+SRGL+
Sbjct: 196 LDYVKSRGLK 205


>sp|SRP54_METJA|SIGNAL recognition particle 54 kDa|Methanocaldococcus jannaschii (strain

Query: 3 YVQSRGLQ 10
Y+Q RGL+
Sbjct: 123 YIQKRGLK 130




188|Sequence|936|945|SRGLQRAPEK

>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 RGLQRAPEK 10
RG+QRAP +
Sbjct: 8 RGIQRAPHR 16


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 RGLQRAPEK 10
+G+QRAP +
Sbjct: 8 KGIQRAPHR 16


>sp|IF6_PYRAE|TRANSLATION initiation factor 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SRGLQRAPE 9
SRGL APE
Sbjct: 153 SRGLLVAPE 161


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RGLQRAPEK 10
+GL+RAP +
Sbjct: 8 KGLKRAPNR 16


>sp|CETZ3_HALVD|TUBULIN-LIKE protein CetZ3|Haloferax volcanii (strain ATCC 29605

Query: 2 RGLQRAPE 9
RGL+ APE
Sbjct: 45 RGLRTAPE 52


>sp|DNAG_METMA|DNA primase DnaG|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GLQRAPEK 10
G +RAPEK
Sbjct: 338 GPERAPEK 345


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis

Query: 2 RGLQRAPE 9
RG++R PE
Sbjct: 89 RGIERDPE 96




189|Sequence|941|950|RAPEKTKGKV

>sp|PELO_THEAC|PROTEIN pelota homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 APEKTKGK 9
PE TKGK
Sbjct: 88 GPEDTKGK 95


>sp|RS3A_THESM|SMALL ribosomal subunit protein eS1|Thermococcus sibiricus (strain DSM

Query: 3 PEKTKGKV 10
PEK KG++
Sbjct: 44 PEKVKGRI 51


>sp|T1M1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 3 PEKTKGKV 10
PE+ KGK+
Sbjct: 462 PEERKGKI 469


>sp|GGPP_METMA|GERANYLGERANYL diphosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 APEKTKGKV 10
APE+ GKV
Sbjct: 224 APEEVLGKV 232


>sp|IDI2_IGNH4|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 APEKTKGK 9
APE KGK
Sbjct: 329 APEHIKGK 336




190|Sequence|946|955|TKGKVSMRFS

>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KGKVSMRFS 10
KGKV MRF+
Sbjct: 91 KGKVVMRFA 99


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 KGKVSMRFS 10
KG V+MRF+
Sbjct: 91 KGNVAMRFA 99


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 KGKVSMRFS 10
KG V MRF+
Sbjct: 91 KGNVVMRFA 99


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 GKVSMRFS 10
GKV MRF+
Sbjct: 102 GKVVMRFA 109


>sp|CBID_METBF|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TKGKVSMRFS 10
T G++ MR+S
Sbjct: 231 TTGRIGMRYS 240


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GKVSMRFS 10
GKV MRF+
Sbjct: 102 GKVVMRFA 109


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KGKVSMRFS 10
KG V MRF+
Sbjct: 91 KGNVVMRFA 99


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 KGKVSMRFS 10
KG V MRF+
Sbjct: 91 KGNVVMRFA 99


>sp|CBID_METMA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TKGKVSMRFS 10
T G++ MR+S
Sbjct: 231 TTGRIGMRYS 240


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GKVSMRFS 10
GKV MRF+
Sbjct: 102 GKVVMRFA 109


>sp|Y447_METJA|UNCHARACTERIZED protein MJ0447|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KGKVSMRF 9
KGK+ +RF
Sbjct: 25 KGKIEIRF 32




191|Sequence|951|960|SMRFSSLCPP

>sp|TF2B_SULAC|TRANSCRIPTION initiation factor IIB|Sulfolobus acidocaldarius (strain ATCC

Query: 5 SSLCPP 10
SSLCPP
Sbjct: 10 SSLCPP 15


>sp|Y038_METJA|UNCHARACTERIZED protein MJ0038|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MRFSSLCPP 10
+RF + CPP
Sbjct: 121 VRFFNECPP 129


>sp|CYAS_METPE|CYSTEATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 RFSSLCP 9
R+SS CP
Sbjct: 19 RYSSFCP 25


>sp|GCH1_CALMQ|GTP cyclohydrolase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 MRFSSLC 8
+RFS+LC
Sbjct: 67 IRFSTLC 73


>sp|RL44E_HALSA|LARGE ribosomal subunit protein eL42|Halobacterium salinarum (strain

Query: 3 RFSSLCP 9
RF+S CP
Sbjct: 6 RFNSYCP 12




192|Sequence|956|965|SLCPPSTSTA

>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LCPPS 6
LCPPS
Sbjct: 1083 LCPPS 1087


>sp|TF2B_SULAC|TRANSCRIPTION initiation factor IIB|Sulfolobus acidocaldarius (strain ATCC

Query: 1 SLCPP 5
SLCPP
Sbjct: 11 SLCPP 15


>sp|LEUC_METB6|3-ISOPROPYLMALATE dehydratase large subunit|Methanoregula boonei (strain DSM 21154

Query: 2 LCPPSTSTA 10
LC P+T+ A
Sbjct: 395 LCSPATAAA 403


>sp|FRHG_METVO|COENZYME F420 hydrogenase subunit gamma|Methanococcus voltae

Query: 3 CPPSTST 9
CPPST +
Sbjct: 141 CPPSTES 147




193|Sequence|961|970|STSTASGRRP

>sp|Y1574_METJA|UNCHARACTERIZED ATP-dependent helicase MJ1574|Methanocaldococcus jannaschii

Query: 1 STSTASGR 8
+TSTASG+
Sbjct: 66 TTSTASGK 73


>sp|ATGT_HALMA|TRNA-GUANINE(15) transglycosylase|Haloarcula marismortui (strain ATCC 43049

Query: 2 TSTASGRRP 10
TST S RRP
Sbjct: 369 TSTESARRP 377




194|Sequence|966|975|SGRRPSLVID

>sp|Y1076_METJA|UNCHARACTERIZED ATP-binding protein MJ1076|Methanocaldococcus jannaschii (strain

Query: 2 GRRPSLVID 10
G+RP LVID
Sbjct: 126 GKRPVLVID 134


>sp|CAS1_METKA|CRISPR-ASSOCIATED endonuclease Cas1|Methanopyrus kandleri (strain AV19 /

Query: 2 GRRPSLVID 10
GRRP L++D
Sbjct: 225 GRRPGLILD 233


>sp|Y948_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB09480|Pyrococcus abyssi (strain GE5 /

Query: 1 SGRRPSLVID 10
+G+RP L++D
Sbjct: 133 AGKRPILILD 142


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SGRRPSLVID 10
SG RP VID
Sbjct: 32 SGSRPVFVID 41


>sp|Y1451_METJA|UNCHARACTERIZED protein MJ1451|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SGRRPSLVID 10
+GR+P L+I+
Sbjct: 407 TGRKPELIIE 416


>sp|Y147_METJA|UNCHARACTERIZED ATP-binding protein MJ0147|Methanocaldococcus jannaschii (strain

Query: 1 SGRRPSLVID 10
SG++P L++D
Sbjct: 141 SGKQPVLILD 150


>sp|SAHH_AERPE|ADENOSYLHOMOCYSTEINASE pernix (strain ATCC 700893

Query: 1 SGRRPSLVID 10
+GR P +VID
Sbjct: 116 AGREPDIVID 125


>sp|Y626_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB06260|Pyrococcus abyssi (strain GE5 /

Query: 2 GRRPSLVID 10
G+RP L++D
Sbjct: 134 GKRPILILD 142


>sp|Y625_METJA|UNCHARACTERIZED ATP-binding protein MJ0625|Methanocaldococcus jannaschii (strain

Query: 2 GRRPSLVID 10
G++P L+ID
Sbjct: 126 GKKPVLIID 134


>sp|Y3526_METJA|UNCHARACTERIZED ATP-binding protein MJECL26|Methanocaldococcus jannaschii (strain

Query: 2 GRRPSLVID 10
G++P L+ID
Sbjct: 130 GKKPVLIID 138


>sp|Y1006_METJA|UNCHARACTERIZED ATP-binding protein MJ1006|Methanocaldococcus jannaschii (strain

Query: 2 GRRPSLVID 10
G++P L+ID
Sbjct: 144 GKKPILIID 152


>sp|Y760_METJA|UNCHARACTERIZED protein MJ0760|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RRPSLVID 10
R PSL+ID
Sbjct: 14 RSPSLLID 21


>sp|Y1200_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB12000|Pyrococcus abyssi (strain GE5 /

Query: 1 SGRRPSLVID 10
SGR P L++D
Sbjct: 116 SGRIPVLILD 125


>sp|MV3K_PICTO|MEVALONATE-3-KINASE torridus (strain ATCC 700027

Query: 1 SGRRPSLVID 10
S R PS VID
Sbjct: 71 SDRSPSKVID 80


>sp|PELO_METVS|PROTEIN pelota homolog|Methanococcus vannielii (strain ATCC 35089

Query: 1 SGRRPSLVI 9
SG+RP +V+
Sbjct: 128 SGKRPKVVV 136


>sp|DPCKG_KORCO|GTP-DEPENDENT dephospho-CoA kinase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 SGRRPSLVI 9
SGRRP + I
Sbjct: 48 SGRRPEVAI 56


>sp|CAS1A_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 RPSLVID 10
RPSLV+D
Sbjct: 225 RPSLVLD 231


>sp|CAS1B_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 RPSLVID 10
RPSLV+D
Sbjct: 221 RPSLVLD 227


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GRRPSLVID 10
GRR +V+D
Sbjct: 498 GRRAEIVVD 506




195|Sequence|971|980|SLVIDGRSLA

>sp|SFSA_SULAC|SUGAR fermentation stimulation protein homolog|Sulfolobus acidocaldarius

Query: 1 SLVIDGRSL 9
SLV+DG++L
Sbjct: 124 SLVVDGKAL 132


>sp|HTR6_HALS3|TRANSDUCER protein Htr6|Halobacterium salinarum (strain ATCC 29341

Query: 2 LVIDGRSLA 10
L I+GRSLA
Sbjct: 134 LAIEGRSLA 142


>sp|PYRH_METTP|URIDYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 SLVIDGRSLA 10
++V+DGR++A
Sbjct: 197 TVVVDGRNVA 206


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 1 SLVIDGRSLA 10
SL++D RS+
Sbjct: 125 SLIVDSRSIG 134


>sp|FOLD_METBU|BIFUNCTIONAL protein FolD|Methanococcoides burtonii (strain DSM 6242

Query: 3 VIDGRSLA 10
+IDGR++A
Sbjct: 9 IIDGRAIA 16


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SLVIDGRSL 9
SL+I+GR++
Sbjct: 238 SLIIEGRNI 246


>sp|GUAAB_SULTO|GMP synthase [glutamine-hydrolyzing] subunit B|Sulfurisphaera

Query: 3 VIDGRSLA 10
++DGR++A
Sbjct: 19 IVDGRAIA 26


>sp|ENGB_HALMA|PROBABLE GTP-binding protein EngB|Haloarcula marismortui (strain ATCC 43049

Query: 2 LVIDGRSL 9
LV+DG+S+
Sbjct: 98 LVVDGKSV 105


>sp|TRPD_THEVO|ANTHRANILATE phosphoribosyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 VIDGRSLA 10
V+DGRS++
Sbjct: 238 VVDGRSIS 245


>sp|COBQ_HALSA|PROBABLE cobyric acid synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LVIDGRSL 9
LV+DGR++
Sbjct: 104 LVVDGRAV 111


>sp|COBQ_HALS3|PROBABLE cobyric acid synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LVIDGRSL 9
LV+DGR++
Sbjct: 104 LVVDGRAV 111




196|Sequence|976|985|GRSLAYALEK

>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GRSLAYALEK 10
G+S+A ALE+
Sbjct: 398 GKSIAAALER 407


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GRSLAYALEK 10
GR + Y LEK
Sbjct: 463 GRKITYLLEK 472


>sp|DNAK_THEVO|CHAPERONE protein DnaK|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GRSLAYALEK 10
SLAY++EK
Sbjct: 516 AESLAYSVEK 525


>sp|DNAK_THEAC|CHAPERONE protein DnaK|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GRSLAYALEK 10
SLAY++EK
Sbjct: 515 AESLAYSVEK 524


>sp|DNAK_METTH|CHAPERONE protein DnaK|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 SLAYALEK 10
SLAY L+K
Sbjct: 159 SLAYGLDK 166


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 3 SLAYALEK 10
SLAY L+K
Sbjct: 153 SLAYGLDK 160


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SLAYALEK 10
SLAY L+K
Sbjct: 153 SLAYGLDK 160


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 3 SLAYALEK 10
SLAY L+K
Sbjct: 153 SLAYGLDK 160


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 3 SLAYALEK 10
SLAY L+K
Sbjct: 153 SLAYGLDK 160




197|Sequence|981|990|YALEKNLEDK

>sp|PFDA_PYRFU|PREFOLDIN subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YALEKNLED 9
YA+EK LED
Sbjct: 86 YAVEKTLED 94


>sp|AATE_METVS|A-TYPE ATP synthase subunit E|Methanococcus vannielii (strain ATCC 35089

Query: 1 YALEKNLEDK 10
+ALEK +ED+
Sbjct: 140 WALEKEMEDR 149


>sp|AATE_METM5|A-TYPE ATP synthase subunit E|Methanococcus maripaludis (strain C5 /

Query: 1 YALEKNLEDK 10
+ALEK +ED+
Sbjct: 140 WALEKEMEDR 149


>sp|AATE_METM6|A-TYPE ATP synthase subunit E|Methanococcus maripaludis (strain C6 /

Query: 1 YALEKNLEDK 10
+ALEK +ED+
Sbjct: 140 WALEKEMEDR 149


>sp|AATE_METMP|A-TYPE ATP synthase subunit E|Methanococcus maripaludis (strain DSM 14266

Query: 1 YALEKNLEDK 10
+ALEK +ED+
Sbjct: 140 WALEKEMEDR 149


>sp|AATE_METM7|A-TYPE ATP synthase subunit E|Methanococcus maripaludis (strain C7 /

Query: 1 YALEKNLEDK 10
+ALEK +ED+
Sbjct: 140 WALEKEMEDR 149


>sp|HIS1_METJA|ATP phosphoribosyltransferase|Methanocaldococcus jannaschii (strain

Query: 3 LEKNLEDK 10
LE+N+EDK
Sbjct: 73 LERNVEDK 80


>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YALEKNLED 9
YA+ KNL+D
Sbjct: 31 YAIMKNLKD 39


>sp|PFDA_THEON|PREFOLDIN subunit alpha|Thermococcus onnurineus (strain NA1)

Query: 1 YALEKNLED 9
YA EK+L+D
Sbjct: 87 YATEKSLDD 95


>sp|CDC62_METTH|ORC1-TYPE DNA replication protein 2|Methanothermobacter thermautotrophicus

Query: 1 YALEKNLE 8
YAL+KN++
Sbjct: 191 YALDKNVD 198


>sp|PFDA1_THEKO|PREFOLDIN subunit alpha 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YALEKNLED 9
YA++K+L+D
Sbjct: 86 YAVQKSLDD 94




198|Sequence|986|995|NLEDKFLFLA

>sp|Y237_THEAC|MEMO1 family protein Ta0237|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LEDKFLFLA 10
+ED F+F+A
Sbjct: 168 IEDPFIFIA 176


>sp|RLME_HALSA|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum (strain

Query: 1 NLEDKFLFLA 10
++ED+F F+A
Sbjct: 165 DIEDEFAFVA 174


>sp|RLME_HALS3|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum (strain

Query: 1 NLEDKFLFLA 10
++ED+F F+A
Sbjct: 165 DIEDEFAFVA 174


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 1 NLEDKF 6
NLEDKF
Sbjct: 317 NLEDKF 322




199|Sequence|991|1000|FLFLAKQCRS

>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FLAKQCR 9
F+A QCR
Sbjct: 887 FMASQCR 893


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLFLAKQCR 9
FL+L CR
Sbjct: 527 FLYLCPNCR 535




200|Sequence|996|1005|KQCRSVLCCR

>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KQCRSVLCC 9
K CR +L C
Sbjct: 131 KSCRFILSC 139


>sp|RFCS_METB6|REPLICATION factor C small subunit|Methanoregula boonei (strain DSM 21154

Query: 1 KQCRSVLCC 9
K CR +L C
Sbjct: 132 KTCRFILSC 140


>sp|Y2656_METAC|UPF0228 protein MA_2656|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 SVLCC 9
SVLCC
Sbjct: 303 SVLCC 307




201|Sequence|1001|1010|VLCCRSTPLQ

***** No hits found ******


202|Sequence|1006|1015|STPLQKSMVV

>sp|SYH_METMA|HISTIDINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PLQKSMVV 10
P QKS+VV
Sbjct: 319 PAQKSLVV 326




203|Sequence|1011|1020|KSMVVKLVRS

>sp|Y1517_METJA|UNCHARACTERIZED protein MJ1517|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KSMVVKLVR 9
KSMVVKLV+
Sbjct: 250 KSMVVKLVK 258




204|Sequence|1016|1025|KLVRSKLKAM

>sp|HIS8_SACS2|HISTIDINOL-PHOSPHATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KLVRSKLKA 9
KLVR+K+K+
Sbjct: 24 KLVRNKIKS 32


>sp|SYE_PYRAE|GLUTAMATE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LVRSKLKAM 10
L +SKLKAM
Sbjct: 345 LSKSKLKAM 353




205|Sequence|1021|1030|KLKAMTLAIG

>sp|COFH1_METMP|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanococcus maripaludis (strain DSM

Query: 1 KLKAMTLAIG 10
KLK M LA+G
Sbjct: 336 KLKDMVLAVG 345


>sp|TRPE_SACS2|ANTHRANILATE synthase component 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KLKAMTLAIG 10
KLKA+ AIG
Sbjct: 410 KLKALKTAIG 419


>sp|COFH_METM5|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C5 /

Query: 1 KLKAMTLAIG 10
KLK M LA+G
Sbjct: 336 KLKDMILAVG 345


>sp|COFH_METM6|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C6 /

Query: 1 KLKAMTLAIG 10
KLK M LA+G
Sbjct: 336 KLKDMILAVG 345


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 KLKAMTLAIG 10
K+KA+ +A+G
Sbjct: 977 KIKALEVAVG 986




206|Sequence|1026|1035|TLAIGDGAND

>sp|SERB_METJA|PHOSPHOSERINE phosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TLAIGDGAND 10
T+A+GDGAND
Sbjct: 162 TVAVGDGAND 171


>sp|PATS_METJA|SOLUBLE P-type ATPase-like phosphatase|Methanocaldococcus jannaschii

Query: 1 TLAIGDGAND 10
T+ +GDGAND
Sbjct: 205 TIMVGDGAND 214


>sp|SERB_ARCFU|PHOSPHOSERINE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LAIGDGAND 10
+A+GDGAND
Sbjct: 287 VAVGDGAND 295


>sp|MPGP_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TLAIGDGAND 10
+ A+GDG ND
Sbjct: 199 SYAVGDGEND 208


>sp|PGP_AERPE|PHOSPHOGLYCOLATE phosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LAIGDGAND 10
LAIGDG ND
Sbjct: 179 LAIGDGEND 187


>sp|PGP_SULTO|PHOSPHOGLYCOLATE phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TLAIGDGAND 10
T+AIGD ND
Sbjct: 159 TIAIGDSQND 168


>sp|PGP_METMA|PHOSPHOGLYCOLATE phosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LAIGDGAND 10
+AIGD AND
Sbjct: 169 VAIGDSAND 177


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TLAIGDGAND 10
T +GDG ND
Sbjct: 578 TAMVGDGVND 587


>sp|PGP_METBU|PHOSPHOGLYCOLATE phosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LAIGDGAND 10
LAIGD ND
Sbjct: 169 LAIGDSCND 177


>sp|PGP_THEKO|PHOSPHOGLYCOLATE phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 IGDGAND 10
IGDG ND
Sbjct: 178 IGDGEND 184


>sp|GPMPP_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE/MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TLAIGDGAND 10
T+A+GD ND
Sbjct: 209 TIALGDSLND 218


>sp|PGP_HALMA|PHOSPHOGLYCOLATE phosphatase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LAIGDGAND 10
LA+GD ND
Sbjct: 174 LAVGDSVND 182


>sp|PGP_HALSA|PHOSPHOGLYCOLATE phosphatase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LAIGDGAND 10
+A+GD AND
Sbjct: 172 VAVGDSAND 180


>sp|PGP_HALS3|PHOSPHOGLYCOLATE phosphatase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LAIGDGAND 10
+A+GD AND
Sbjct: 172 VAVGDSAND 180


>sp|PGP_PYRAB|PHOSPHOGLYCOLATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 4 IGDGAND 10
IGDG ND
Sbjct: 175 IGDGEND 181


>sp|RL14E_METS5|LARGE ribosomal subunit protein eL14|Metallosphaera sedula (strain ATCC

Query: 1 TLAIGDGAND 10
T+ IG GA+D
Sbjct: 60 TVEIGKGASD 69


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 4 IGDGAND 10
+GDG ND
Sbjct: 502 VGDGTND 508


>sp|KDPB_THEAC|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma acidophilum (strain ATCC

Query: 4 IGDGAND 10
+GDG ND
Sbjct: 499 VGDGTND 505


>sp|PGP_PYRHO|PHOSPHOGLYCOLATE phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 IGDGAND 10
+GDG ND
Sbjct: 175 VGDGEND 181


>sp|PGP_PYRFU|PHOSPHOGLYCOLATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 IGDGAND 10
+GDG ND
Sbjct: 175 VGDGEND 181


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 4 IGDGAND 10
+GDG ND
Sbjct: 616 VGDGIND 622


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 5 GDGAND 10
GDG ND
Sbjct: 557 GDGVND 562


>sp|PGP_METAC|PHOSPHOGLYCOLATE phosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LAIGDGAND 10
+AIGD ND
Sbjct: 169 VAIGDSEND 177


>sp|PGP_THESM|PHOSPHOGLYCOLATE phosphatase|Thermococcus sibiricus (strain DSM 12597

Query: 4 IGDGAND 10
IGDG ND
Sbjct: 176 IGDGEND 182


>sp|PGP_PICTO|PHOSPHOGLYCOLATE phosphatase|Picrophilus torridus (strain ATCC 700027

Query: 1 TLAIGDGAND 10
L IGD ND
Sbjct: 180 VLVIGDSQND 189


>sp|BTUDA_HALSA|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 1 TLAIGDGA 8
TLA+GD A
Sbjct: 361 TLAVGDAA 368


>sp|BTUDA_HALS3|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 1 TLAIGDGA 8
TLA+GD A
Sbjct: 361 TLAVGDAA 368


>sp|PGP_METMJ|PHOSPHOGLYCOLATE phosphatase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LAIGDGAND 10
+A+GD ND
Sbjct: 176 MAVGDSEND 184


>sp|PGP_NATPD|PHOSPHOGLYCOLATE phosphatase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LAIGDGAND 10
+AIGD ND
Sbjct: 171 IAIGDSEND 179


>sp|PGP_METS3|PHOSPHOGLYCOLATE phosphatase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 TLAIGDGAND 10
+A+GD ND
Sbjct: 180 VMAMGDSEND 189


>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 3 AIGDGAND 10
AIGD ND
Sbjct: 28 AIGDKCND 35


>sp|PGP2_SACS2|PHOSPHOGLYCOLATE phosphatase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LAIGDGAND 10
+A+GD ND
Sbjct: 170 IALGDSEND 178




207|Sequence|1031|1040|DGANDVSMIQ

>sp|SERB_METJA|PHOSPHOSERINE phosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGANDVSMIQ 10
DGAND+SM +
Sbjct: 167 DGANDISMFK 176


>sp|SERB_ARCFU|PHOSPHOSERINE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGANDVSMIQ 10
DGAND MI+
Sbjct: 291 DGANDRLMIE 300


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 GANDVSMIQ 10
A+DV+MIQ
Sbjct: 288 AAHDVAMIQ 296


>sp|PATS_METJA|SOLUBLE P-type ATPase-like phosphatase|Methanocaldococcus jannaschii

Query: 1 DGANDV-SMIQ 10
DGANDV +MI+
Sbjct: 210 DGANDVPAMIE 220


>sp|PGP_AERPE|PHOSPHOGLYCOLATE phosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DGANDVSMI 9
DG NDV ++
Sbjct: 183 DGENDVEVL 191




208|Sequence|1036|1045|VSMIQVADVG

>sp|DNAG_PICTO|DNA primase DnaG|Picrophilus torridus (strain ATCC 700027

Query: 3 MIQVADV 9
M+QVADV
Sbjct: 232 MLQVADV 238




209|Sequence|1041|1050|VADVGVGISG

>sp|GGR_METMJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VADVGVGISG 10
A+VG+GISG
Sbjct: 218 TANVGIGISG 227


>sp|GGR_METB6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoregula boonei (strain DSM 21154

Query: 2 ADVGVGISG 10
A+VG+GISG
Sbjct: 219 ANVGIGISG 227


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 ADVGVGISG 10
A+VG+GISG
Sbjct: 219 ANVGLGISG 227


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ADVGVGI 8
AD+GVG+
Sbjct: 468 ADIGVGV 474


>sp|Y1157_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 VGVGISG 10
+G+GISG
Sbjct: 85 IGIGISG 91


>sp|NCPP_SACI4|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 2 ADVGVGISG 10
AD+G+GI G
Sbjct: 65 ADIGLGIEG 73


>sp|NCPP_SACI7|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 2 ADVGVGISG 10
AD+G+GI G
Sbjct: 65 ADIGLGIEG 73


>sp|NCPP_SACI6|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 2 ADVGVGISG 10
AD+G+GI G
Sbjct: 65 ADIGLGIEG 73


>sp|NCPP_SACI3|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 2 ADVGVGISG 10
AD+G+GI G
Sbjct: 65 ADIGLGIEG 73


>sp|NCPP_SACI2|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 2 ADVGVGISG 10
AD+G+GI G
Sbjct: 65 ADIGLGIEG 73


>sp|NCPP_SACI1|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 2 ADVGVGISG 10
AD+G+GI G
Sbjct: 65 ADIGLGIEG 73


>sp|Y410_METJA|UNCHARACTERIZED ATP-binding protein MJ0410|Methanocaldococcus jannaschii (strain

Query: 1 VADVGVGISG 10
+ D+G+G++G
Sbjct: 159 ITDLGIGLTG 168


>sp|NCPP_SACS2|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus solfataricus

Query: 2 ADVGVGISG 10
AD+G+GI G
Sbjct: 65 ADIGLGIEG 73


>sp|BACH_HALHM|HALORHODOPSIN halobium (strain mex)

Query: 1 VADVGVGISG 10
VADVG+ I+G
Sbjct: 109 VADVGMCITG 118


>sp|UPPP_METBU|UNDECAPRENYL-DIPHOSPHATASE burtonii (strain DSM 6242

Query: 1 VADVGVGISG 10
VA++GVG+ G
Sbjct: 204 VAEIGVGLMG 213


>sp|GGR_METLZ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 ADVGVGISG 10
A+VG+GI+G
Sbjct: 219 ANVGIGIAG 227


>sp|NCPP_KORCO|PROBABLE inosine/xanthosine triphosphatase|Korarchaeum cryptofilum (strain

Query: 2 ADVGVGISG 10
AD GVGI G
Sbjct: 63 ADFGVGIEG 71


>sp|PRIL_SACS2|DNA primase large subunit PriL|Saccharolobus solfataricus (strain ATCC

Query: 3 DVGVGISG 10
D+G G+SG
Sbjct: 240 DIGKGLSG 247


>sp|GGR1_METKA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanopyrus kandleri (strain AV19 /

Query: 2 ADVGVGISG 10
A+VGVGI G
Sbjct: 212 ANVGVGIRG 220


>sp|MCH_METTM|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanothermobacter marburgensis (strain ATCC

Query: 1 VADVGVGISG 10
+ADVG+ I G
Sbjct: 60 LADVGISIPG 69


>sp|MCH_METTH|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanothermobacter thermautotrophicus (strain

Query: 1 VADVGVGISG 10
+ADVG+ I G
Sbjct: 60 LADVGISIPG 69


>sp|PURQ_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosphaera stadtmanae (strain ATCC

Query: 1 VADVGVGI 8
VADV VGI
Sbjct: 4 VADVNVGI 11


>sp|MCH_METS3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VADVGVGISG 10
+ADVG+ I G
Sbjct: 60 LADVGISIPG 69




210|Sequence|1046|1055|VGISGQEGMQ

>sp|PYRI_PYRAE|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum aerophilum

Query: 1 VGISGQEGMQ 10
+GISG+EG++
Sbjct: 31 LGISGKEGLR 40


>sp|PYRI_PYRCJ|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum calidifontis

Query: 1 VGISGQEGMQ 10
+GI+G+EG++
Sbjct: 31 LGITGREGLR 40


>sp|PYRI_PYRIL|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum islandicum

Query: 1 VGISGQEGMQ 10
+GI+G+EG++
Sbjct: 31 LGITGKEGVR 40


>sp|PYRI_STAMF|ASPARTATE carbamoyltransferase regulatory chain|Staphylothermus marinus

Query: 1 VGISGQEGMQ 10
+GI+G EG++
Sbjct: 39 LGITGSEGLR 48


>sp|PYRI_PYRNV|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum neutrophilum

Query: 1 VGISGQEGMQ 10
+GI+G+EG++
Sbjct: 31 LGITGREGVR 40


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VGISGQEG 8
VGI GQ+G
Sbjct: 272 VGIKGQKG 279


>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VGISGQEG 8
VGI GQ+G
Sbjct: 271 VGIKGQKG 278


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VGISGQEG 8
VGI GQ+G
Sbjct: 271 VGIKGQKG 278


>sp|PYRI_PYRAR|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum arsenaticum

Query: 1 VGISGQEGMQ 10
+GI+G+EG +
Sbjct: 31 LGITGKEGAR 40


>sp|Y753_METJA|UNCHARACTERIZED protein MJ0753|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGISGQE 7
VGISG+E
Sbjct: 93 VGISGKE 99


>sp|ARGB_ARCFU|ACETYLGLUTAMATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VGISGQEGM 9
VG+SG++G+
Sbjct: 116 VGLSGKDGL 124




211|Sequence|1051|1060|QEGMQAVMAS

***** No hits found ******


212|Sequence|1056|1065|AVMASDFAVP

***** No hits found ******


213|Sequence|1061|1070|DFAVPKFRYL

>sp|RL22_THEAC|LARGE ribosomal subunit protein uL22|Thermoplasma acidophilum (strain

Query: 2 FAVPKFRYL 10
+A+P FRYL
Sbjct: 57 YAIPYFRYL 65


>sp|RL22_THEVO|LARGE ribosomal subunit protein uL22|Thermoplasma volcanium (strain

Query: 2 FAVPKFRYL 10
+A+P FRYL
Sbjct: 54 YAIPYFRYL 62


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DFAVPKFRYL 10
DF+ PK +Y+
Sbjct: 168 DFSFPKIKYI 177


>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 2 FAVPKFRYL 10
F P+FRY+
Sbjct: 232 FDAPEFRYV 240


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 AVPKFRY 9
VPKFR+
Sbjct: 429 GVPKFRF 435


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 3 AVPKFRY 9
VPKFR+
Sbjct: 428 GVPKFRF 434


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 AVPKFRY 9
VPKFR+
Sbjct: 428 GVPKFRF 434


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 AVPKFRY 9
VPKFR+
Sbjct: 430 GVPKFRF 436


>sp|Y1782_THEKO|UNCHARACTERIZED serpin-like protein TK1782|Thermococcus kodakarensis (strain ATCC

Query: 3 AVPKFRY 9
A+PKFR+
Sbjct: 315 ALPKFRF 321


>sp|PRIS_THEON|DNA primase small subunit PriS|Thermococcus onnurineus (strain NA1)

Query: 3 AVPKFR 8
AVPKFR
Sbjct: 322 AVPKFR 327


>sp|PRIS_PYRHO|DNA primase small subunit PriS|Pyrococcus horikoshii (strain ATCC

Query: 3 AVPKFR 8
AVPKFR
Sbjct: 324 AVPKFR 329


>sp|PRIS_PYRFU|DNA primase small subunit PriS|Pyrococcus furiosus (strain ATCC 43587

Query: 3 AVPKFR 8
AVPKFR
Sbjct: 324 AVPKFR 329


>sp|PRIS_PYRAB|DNA primase small subunit PriS|Pyrococcus abyssi (strain GE5 /

Query: 3 AVPKFR 8
AVPKFR
Sbjct: 324 AVPKFR 329


>sp|PRIS_THESM|DNA primase small subunit PriS|Thermococcus sibiricus (strain DSM 12597

Query: 3 AVPKFR 8
AVPKFR
Sbjct: 320 AVPKFR 325


>sp|RL22_NANEQ|LARGE ribosomal subunit protein uL22|Nanoarchaeum equitans (strain

Query: 1 DFAVPKFRY 9
+ AVP FRY
Sbjct: 51 ELAVPFFRY 59


>sp|Y2678_METMA|UNCHARACTERIZED serpin-like protein MM_2675|Methanosarcina mazei (strain ATCC

Query: 1 DFAVPKFRY 9
D +PKF++
Sbjct: 310 DILIPKFKF 318


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DFAVPKFRYL 10
D P FRY+
Sbjct: 141 DTVTPPFRYI 150




214|Sequence|1066|1075|KFRYLERLLI

>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 FRYLERL 8
+RYLERL
Sbjct: 8 YRYLERL 14


>sp|ACDE_METTH|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanothermobacter

Query: 2 FRYLERL 8
FRYLE++
Sbjct: 164 FRYLEKM 170


>sp|SYFB_METHJ|PHENYLALANINE--TRNA ligase beta subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 FRYLERL 8
++YLERL
Sbjct: 8 YKYLERL 14


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 2 FRYLERL 8
++YLERL
Sbjct: 8 YKYLERL 14


>sp|Y075_METJA|UNCHARACTERIZED ATP-binding protein MJ0075|Methanocaldococcus jannaschii (strain

Query: 2 FRYLERL 8
FRYLER+
Sbjct: 133 FRYLERV 139


>sp|Y778_AERPE|PUTATIVE HTH-type transcriptional regulatory protein|Aeropyrum pernix

Query: 2 FRYLERLLI 10
+RY ERL++
Sbjct: 21 YRYAERLVV 29


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FRYLERL 8
F YLERL
Sbjct: 206 FAYLERL 212


>sp|Y858_METJA|UNCHARACTERIZED protein MJ0858|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RYLERLLI 10
RY+ERL I
Sbjct: 93 RYIERLRI 100


>sp|H669_METJA|PROBABLE ATP-dependent RNA helicase MJ0669|Methanocaldococcus jannaschii

Query: 1 KFRYLERLL 9
K RY+ER +
Sbjct: 349 KLRYIERAM 357




215|Sequence|1071|1080|ERLLILHGHW

>sp|COFC_METMS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 4 LILHGH 9
LILHGH
Sbjct: 178 LILHGH 183


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ERLLILHGHW 10
E+LL LH W
Sbjct: 301 EKLLALHNLW 310


>sp|RS4_METJA|SMALL ribosomal subunit protein uS4|Methanocaldococcus jannaschii (strain

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 124 RQLIVHGH 131


>sp|THYX_SACS2|FLAVIN-DEPENDENT thymidylate synthase|Saccharolobus solfataricus (strain ATCC

Query: 2 RLLILHGHW 10
R ILHG+W
Sbjct: 47 RDAILHGYW 55


>sp|RS4_METST|SMALL ribosomal subunit protein uS4|Methanosphaera stadtmanae (strain

Query: 2 RLLILHGH 9
RL ++HGH
Sbjct: 122 RLFVVHGH 129


>sp|PYRB_METMJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanoculleus marisnigri

Query: 1 ERLLILH 7
ERL+ILH
Sbjct: 252 ERLMILH 258


>sp|RS4_METS5|SMALL ribosomal subunit protein uS4|Metallosphaera sedula (strain ATCC

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 123 RQLIVHGH 130


>sp|CCA_PYRHO|CCA-ADDING enzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 ILHGHW 10
ILH HW
Sbjct: 140 ILHTHW 145


>sp|RS4_METS3|SMALL ribosomal subunit protein uS4|Methanobrevibacter smithii (strain

Query: 2 RLLILHGH 9
R+ ++HGH
Sbjct: 122 RMFVVHGH 129


>sp|RS4_SACI7|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 123 RQLIIHGH 130


>sp|RS4_SACI6|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 123 RQLIIHGH 130


>sp|RS4_SACI4|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 123 RQLIIHGH 130


>sp|RS4_SACI3|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 123 RQLIIHGH 130


>sp|RS4_SACI2|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 123 RQLIIHGH 130


>sp|RS4_SACI1|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 123 RQLIIHGH 130


>sp|THYX_SULTO|FLAVIN-DEPENDENT thymidylate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RLLILHGHW 10
R ILHG+W
Sbjct: 46 RDAILHGYW 54


>sp|RS4_METVS|SMALL ribosomal subunit protein uS4|Methanococcus vannielii (strain ATCC

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 123 RQLIVHGH 130


>sp|RS4_METLZ|SMALL ribosomal subunit protein uS4|Methanocorpusculum labreanum (strain

Query: 2 RLLILHGH 9
R LI HGH
Sbjct: 127 RQLITHGH 134


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 2 RLLILHGHW 10
RLL LH W
Sbjct: 298 RLLALHNLW 306


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RLLILHGHW 10
RLL LH W
Sbjct: 302 RLLALHNLW 310


>sp|RS4_PYRHO|SMALL ribosomal subunit protein uS4|Pyrococcus horikoshii (strain ATCC

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 122 RQLIVHGH 129


>sp|RS4_THEON|SMALL ribosomal subunit protein uS4|Thermococcus onnurineus (strain NA1)

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 122 RQLIVHGH 129


>sp|RS4_PYRFU|SMALL ribosomal subunit protein uS4|Pyrococcus furiosus (strain ATCC

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 122 RQLIVHGH 129


>sp|RS4_PYRAB|SMALL ribosomal subunit protein uS4|Pyrococcus abyssi (strain GE5 /

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 122 RQLIVHGH 129


>sp|RS4_THEKO|SMALL ribosomal subunit protein uS4|Thermococcus kodakarensis (strain

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 122 RQLIVHGH 129


>sp|RS4_THEGJ|SMALL ribosomal subunit protein uS4|Thermococcus gammatolerans (strain

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 122 RQLIVHGH 129


>sp|RS4_THEAC|SMALL ribosomal subunit protein uS4|Thermoplasma acidophilum (strain ATCC

Query: 2 RLLILHGH 9
R LI HGH
Sbjct: 125 RQLITHGH 132


>sp|RS4_THESM|SMALL ribosomal subunit protein uS4|Thermococcus sibiricus (strain DSM

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 122 RQLIVHGH 129


>sp|RS4_STAMF|SMALL ribosomal subunit protein uS4|Staphylothermus marinus (strain ATCC

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 122 RQLIIHGH 129


>sp|RS4_HYPBU|SMALL ribosomal subunit protein uS4|Hyperthermus butylicus (strain DSM

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 122 RQLIVHGH 129


>sp|RS4_THEVO|SMALL ribosomal subunit protein uS4|Thermoplasma volcanium (strain ATCC

Query: 2 RLLILHGH 9
R LI HGH
Sbjct: 125 RQLITHGH 132


>sp|RS4_SULTO|SMALL ribosomal subunit protein uS4|Sulfurisphaera tokodaii (strain DSM

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 123 RQLIVHGH 130


>sp|RS4_SACS2|SMALL ribosomal subunit protein uS4|Saccharolobus solfataricus (strain

Query: 2 RLLILHGH 9
R LI HGH
Sbjct: 123 RQLITHGH 130


>sp|RS4_META3|SMALL ribosomal subunit protein uS4|Methanococcus aeolicus (strain ATCC

Query: 2 RLLILHGH 9
R I+HGH
Sbjct: 123 RQFIVHGH 130


>sp|MTAD_PYRAB|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus abyssi (strain GE5 /

Query: 1 ERLLILHGHW 10
E+L+ HG W
Sbjct: 242 EKLIAAHGIW 251


>sp|RS4_METM7|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain C7

Query: 2 RLLILHGH 9
R I+HGH
Sbjct: 123 RQFIVHGH 130


>sp|RS4_METM5|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain C5

Query: 2 RLLILHGH 9
R I+HGH
Sbjct: 123 RQFIVHGH 130


>sp|Y516_METST|UPF0173 metal-dependent hydrolase Msp_0516|Methanosphaera stadtmanae

Query: 3 LLILHGH 9
+LI HGH
Sbjct: 45 ILITHGH 51


>sp|RS4_METMP|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain DSM

Query: 2 RLLILHGH 9
R I+HGH
Sbjct: 123 RQFIVHGH 130


>sp|RS4_METAR|SMALL ribosomal subunit protein uS4|Methanocella arvoryzae (strain DSM

Query: 2 RLLILHGH 9
R I+HGH
Sbjct: 129 RQFIVHGH 136


>sp|RS4_SULAC|SMALL ribosomal subunit protein uS4|Sulfolobus acidocaldarius (strain

Query: 2 RLLILHGH 9
R LI HGH
Sbjct: 123 RQLITHGH 130


>sp|RS4_METM6|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain C6

Query: 2 RLLILHGH 9
R I+HGH
Sbjct: 123 RQFIVHGH 130


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 ERLLILH 7
E+LL+LH
Sbjct: 531 EKLLVLH 537


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 ERLLILH 7
E+LL+LH
Sbjct: 525 EKLLVLH 531


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 ERLLILH 7
E+LL+LH
Sbjct: 524 EKLLVLH 530


>sp|RS4_CALMQ|SMALL ribosomal subunit protein uS4|Caldivirga maquilingensis (strain

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 125 RQLIVHGH 132


>sp|RS4_PYRAR|SMALL ribosomal subunit protein uS4|Pyrobaculum arsenaticum (strain DSM

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 125 RQLIVHGH 132


>sp|NADK_METHJ|NAD kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ERLLILHGH 9
E+LL HGH
Sbjct: 22 EKLLHHHGH 30


>sp|RS4_PYRAE|SMALL ribosomal subunit protein uS4|Pyrobaculum aerophilum (strain ATCC

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 125 RQLIVHGH 132


>sp|MTAD_PYRFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ERLLILHGHW 10
E+L+ HG W
Sbjct: 237 EKLIAAHGVW 246


>sp|RS4_PYRNV|SMALL ribosomal subunit protein uS4|Pyrobaculum neutrophilum (strain DSM

Query: 2 RLLILHGH 9
R LI+HGH
Sbjct: 125 RQLIVHGH 132


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 ERLLILH 7
ER+LILH
Sbjct: 440 ERVLILH 446


>sp|RS4_AERPE|SMALL ribosomal subunit protein uS4|Aeropyrum pernix (strain ATCC 700893

Query: 2 RLLILHGH 9
R L++HGH
Sbjct: 123 RQLVVHGH 130


>sp|NADM_SACS2|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RLLILHGHW 10
RL+IL+ +W
Sbjct: 135 RLIILNDNW 143


>sp|RS4_HALMA|SMALL ribosomal subunit protein uS4|Haloarcula marismortui (strain ATCC

Query: 2 RLLILHGH 9
R I+HGH
Sbjct: 120 RQFIVHGH 127


>sp|RS4_KORCO|SMALL ribosomal subunit protein uS4|Korarchaeum cryptofilum (strain OPF8)

Query: 2 RLLILHGH 9
R LI HGH
Sbjct: 121 RQLITHGH 128


>sp|COFH1_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina barkeri (strain Fusaro

Query: 4 LILHGH 9
++LHGH
Sbjct: 279 ILLHGH 284


>sp|RS4_THEPD|SMALL ribosomal subunit protein uS4|Thermofilum pendens (strain DSM 2475

Query: 2 RLLILHGH 9
R LI HGH
Sbjct: 123 RQLITHGH 130


>sp|RS4_METTH|SMALL ribosomal subunit protein uS4|Methanothermobacter

Query: 2 RLLILHGH 9
R +++HGH
Sbjct: 122 RQMVIHGH 129


>sp|THYX_SULAC|FLAVIN-DEPENDENT thymidylate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 ILHGHW 10
I HG+W
Sbjct: 49 ITHGYW 54


>sp|RS4_PYRIL|SMALL ribosomal subunit protein uS4|Pyrobaculum islandicum (strain DSM

Query: 2 RLLILHGH 9
R L++HGH
Sbjct: 125 RQLVVHGH 132


>sp|RS4_PYRCJ|SMALL ribosomal subunit protein uS4|Pyrobaculum calidifontis (strain DSM

Query: 2 RLLILHGH 9
R L++HGH
Sbjct: 125 RQLVVHGH 132




216|Sequence|1076|1085|LHGHWCYSRL

>sp|CAS6L_PYRHO|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6nc|Pyrococcus

Query: 2 HGHWCYSRL 10
HG W +SR+
Sbjct: 47 HGFWTFSRI 55


>sp|Y864_THEVO|UPF0173 metal-dependent hydrolase TV0864|Thermoplasma volcanium (strain

Query: 2 HGHWCYS 8
HGH C+S
Sbjct: 8 HGHACFS 14


>sp|Y764_THEAC|UPF0173 metal-dependent hydrolase Ta0764|Thermoplasma acidophilum (strain

Query: 2 HGHWCYS 8
HGH C+S
Sbjct: 9 HGHACFS 15


>sp|Y1118_PICTO|UPF0173 metal-dependent hydrolase PTO1118|Picrophilus torridus (strain

Query: 2 HGHWCYS 8
HGH C+S
Sbjct: 6 HGHACFS 12


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 1 LHGHWCYS 8
+ GHW YS
Sbjct: 382 MEGHWGYS 389


>sp|CAS6L_PYRFU|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6|Pyrococcus

Query: 2 HGHWCYS 8
HG+W +S
Sbjct: 47 HGYWTFS 53


>sp|Y804_METJA|UNCHARACTERIZED protein MJ0804|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WCYSRL 10
+CYSRL
Sbjct: 56 YCYSRL 61


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 3 GHWCYSR 9
HW Y R
Sbjct: 750 AHWVYER 756


>sp|METE_THEVO|METHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 HWCYSR 9
H CYSR
Sbjct: 211 HVCYSR 216


>sp|RLME_METPE|RIBOSOMAL RNA large subunit methyltransferase|Methanosphaerula palustris

Query: 1 LHGHWCYSR 9
L GH CY +
Sbjct: 113 LSGHKCYDQ 121


>sp|GPMA_METAC|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 4 HWCYS 8
HWC S
Sbjct: 149 HWCRS 153


>sp|THYX_SACS2|FLAVIN-DEPENDENT thymidylate synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 LHGHW 5
LHG+W
Sbjct: 51 LHGYW 55


>sp|RIO2_METJA|RIO-TYPE serine/threonine-protein kinase Rio2|Methanocaldococcus jannaschii

Query: 2 HGHWCYSR 9
HG C++R
Sbjct: 97 HGRTCFTR 104


>sp|THYX_SULTO|FLAVIN-DEPENDENT thymidylate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LHGHW 5
LHG+W
Sbjct: 50 LHGYW 54




217|Sequence|1081|1090|CYSRLANMVL

>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 YSRLANM 8
YSR+ANM
Sbjct: 481 YSRIANM 487


>sp|Y1453_METJA|UNCHARACTERIZED protein MJ1453|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YSRLAN 7
YSRLAN
Sbjct: 141 YSRLAN 146


>sp|FOLD_NITMS|BIFUNCTIONAL protein FolD|Nitrosopumilus maritimus (strain SCM1)

Query: 1 CYSRLANMV 9
C+SR N+V
Sbjct: 188 CHSRTKNLV 196




218|Sequence|1086|1095|ANMVLYFFYK

>sp|THII_SACI7|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 NMVLYFFYK 10
N V YF+YK
Sbjct: 149 NDVAYFYYK 157


>sp|THII_SACI1|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 NMVLYFFYK 10
N V YF+YK
Sbjct: 149 NDVAYFYYK 157


>sp|THII_SACI2|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 NMVLYFFYK 10
N V YF+YK
Sbjct: 149 NDVAYFYYK 157


>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain

Query: 3 MVLYFFY 9
MV++FFY
Sbjct: 1 MVIWFFY 7


>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ANMVLYFFY 9
AN+ LYF Y
Sbjct: 79 ANISLYFEY 87


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ANMVLYFFY 9
AN+ LYF Y
Sbjct: 79 ANISLYFEY 87


>sp|EF2_PYRCJ|ELONGATION factor 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ANMVLYFFY 9
AN+ LYF Y
Sbjct: 79 ANISLYFEY 87


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ANMVLYFFY 9
AN+ LYF Y
Sbjct: 79 ANISLYFEY 87


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ANMVLYFFY 9
AN+ LYF Y
Sbjct: 79 ANISLYFEY 87


>sp|YPV4_METTF|UNCHARACTERIZED protein ORF4|Methanothermobacter thermautotrophicus

Query: 3 MVLYFFY 9
++LYFFY
Sbjct: 63 VLLYFFY 69


>sp|FLUC_IGNH4|FLUORIDE-SPECIFIC ion channel FluC|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 MVLYFFYK 10
+V YFFYK
Sbjct: 16 IVRYFFYK 23




219|Sequence|1091|1100|YFFYKNTMFV

>sp|Y1488_PYRFU|UPF0128 protein PF1488|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FYKNTMFV 10
FYK+T+F+
Sbjct: 139 FYKDTVFI 146


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 FFYKNTM 8
F+KNTM
Sbjct: 506 LFFKNTM 512


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 2 FFYKNTMFV 10
F+Y NT++V
Sbjct: 1014 FYYNNTIWV 1022


>sp|SYTC_AERPE|THREONINE--TRNA ligase catalytic subunit|Aeropyrum pernix (strain ATCC 700893

Query: 3 FYKNTMFV 10
FY+N M++
Sbjct: 90 FYRNNMYL 97


>sp|PURQ_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FFYKNTMFV 10
+ YKN M V
Sbjct: 155 YMYKNNMIV 163




220|Sequence|1096|1105|NTMFVGLLFW

>sp|RL15E_METAR|LARGE ribosomal subunit protein eL15|Methanocella arvoryzae (strain DSM

Query: 4 FVGLLFW 10
+VG LFW
Sbjct: 20 YVGELFW 26


>sp|Y762_METJA|UNCHARACTERIZED transporter MJ0762|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NTMFVGLLFW 10
N +F+G +FW
Sbjct: 101 NNLFLGKIFW 110




221|Sequence|1101|1110|GLLFWFQFFC

>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WFQFFC 10
WFQ FC
Sbjct: 488 WFQPFC 493


>sp|CS2H_SACS2|CARBON disulfide hydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 WFQFF 9
WF+FF
Sbjct: 135 WFKFF 139


>sp|Y136_ARCFU|UNCHARACTERIZED protein AF_0136|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 WFQFFC 10
W Q FC
Sbjct: 132 WIQIFC 137


>sp|Y3521_METJA|UNCHARACTERIZED protein MJECL21|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WFQFF 9
WF+FF
Sbjct: 69 WFKFF 73


>sp|YE8A_METJA|UNCHARACTERIZED protein MJ1489.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLLFWFQF 8
GLLF FQF
Sbjct: 29 GLLFAFQF 36




222|Sequence|1106|1115|FQFFCGFSAS

>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FQFFCGFS 8
FQFF G S
Sbjct: 349 FQFFIGIS 356


>sp|COFH_METPE|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanosphaerula palustris (strain

Query: 4 FCGFS 8
FCGFS
Sbjct: 76 FCGFS 80


>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain

Query: 4 FCGFS 8
FCGFS
Sbjct: 76 FCGFS 80


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 5 CGFSAS 10
CGFSA+
Sbjct: 432 CGFSAA 437


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 5 CGFSAS 10
CGFSA+
Sbjct: 432 CGFSAA 437


>sp|COBD_THEAC|PROBABLE cobalamin biosynthesis protein CobD|Thermoplasma acidophilum

Query: 3 FFCGFSA 9
FF GFSA
Sbjct: 209 FFIGFSA 215




223|Sequence|1111|1120|GFSASTMIDQ

>sp|NNR_METTH|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanothermobacter

Query: 1 GFSASTMID 9
GF+AS M+D
Sbjct: 498 GFTASDMVD 506


>sp|PCNA1_SACS2|DNA polymerase sliding clamp 1|Saccharolobus solfataricus (strain ATCC

Query: 1 GFSASTMI 8
GFSA TM+
Sbjct: 214 GFSAPTMV 221




224|Sequence|1116|1125|TMIDQWYLIF

>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 TMIDQWYL 8
TM+D WYL
Sbjct: 770 TMLDAWYL 777


>sp|TRPB_PYRIL|TRYPTOPHAN synthase beta chain|Pyrobaculum islandicum (strain DSM 4184

Query: 2 MIDQWYLI 9
M+D+WY I
Sbjct: 1 MVDRWYNI 8


>sp|TRPB_PYRAR|TRYPTOPHAN synthase beta chain|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 MIDQWYLI 9
M+D+WY I
Sbjct: 1 MVDRWYNI 8


>sp|TRPB_PYRAE|TRYPTOPHAN synthase beta chain|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 MIDQWYLI 9
M+D+WY I
Sbjct: 1 MVDRWYNI 8


>sp|RS3A_PYRHO|SMALL ribosomal subunit protein eS1|Pyrococcus horikoshii (strain ATCC

Query: 3 IDQWYLIF 10
+ QWY+I+
Sbjct: 17 LKQWYIIY 24


>sp|RS3A_PYRAB|SMALL ribosomal subunit protein eS1|Pyrococcus abyssi (strain GE5 /

Query: 3 IDQWYLIF 10
+ QWY+I+
Sbjct: 16 LKQWYVIY 23


>sp|RS3A_PYRFU|SMALL ribosomal subunit protein eS1|Pyrococcus furiosus (strain ATCC

Query: 3 IDQWYLIF 10
+ QWY+I+
Sbjct: 15 LKQWYIIY 22


>sp|VHUA_METVO|F420-NON-REDUCING hydrogenase vhu subunit A|Methanococcus voltae

Query: 2 MIDQWYL 8
+ID WYL
Sbjct: 218 VIDTWYL 224


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 TMIDQWYL 8
T+ID+W L
Sbjct: 703 TLIDRWML 710


>sp|SECD_HALVD|PROTEIN-EXPORT membrane protein SecD|Haloferax volcanii (strain ATCC 29605

Query: 1 TMIDQWYLIF 10
T+ D W +IF
Sbjct: 3 TLRDNWRVIF 12


>sp|RPO1C_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrobaculum aerophilum (strain ATCC

Query: 4 DQWYLI 9
D+WY++
Sbjct: 234 DEWYIV 239




225|Sequence|1121|1130|WYLIFFNLLF

>sp|Y137_METJA|UNCHARACTERIZED protein MJ0137|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WYLIFFNLL 9
W+L+FF L+
Sbjct: 18 WWLLFFYLI 26


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WYLIFFNL 8
WYL FF +
Sbjct: 565 WYLSFFGI 572




226|Sequence|1126|1135|FNLLFSSLPP

>sp|FAU1_CALMQ|PROBABLE ribonuclease FAU-1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 FNLLFSSLPP 10
FN+L S+ PP
Sbjct: 36 FNILHSTEPP 45


>sp|Y2601_AERPE|UNCHARACTERIZED protein APE_2601.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 FNLLFSSLPP 10
FN++F+ PP
Sbjct: 9 FNMVFTRRPP 18


>sp|OFOA_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Saccharolobus solfataricus

Query: 1 FNLLFSSLPP 10
FNL S PP
Sbjct: 50 FNLTISDKPP 59


>sp|GSA_NITMS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 FNLLFSS 7
FNLLFS+
Sbjct: 324 FNLLFST 330


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 3 LLFSSLPP 10
LL+S LPP
Sbjct: 363 LLYSILPP 370




227|Sequence|1131|1140|SSLPPLVTGV

>sp|NADK_HALSA|NAD kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SSLPPLVTGV 10
+LPPLVTG+
Sbjct: 210 DALPPLVTGL 219


>sp|NADK_HALS3|NAD kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 SSLPPLVTGV 10
+LPPLVTG+
Sbjct: 210 DALPPLVTGL 219


>sp|Y1031_METJA|UNCHARACTERIZED transporter MJ1031|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SSLPPLVTGV 10
+ PPL+TG+
Sbjct: 163 AKFPPLITGI 172


>sp|SYFB_THEVO|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SLPPLVTGV 10
S+PP+V G+
Sbjct: 200 SVPPIVNGI 208


>sp|SYFB_METM7|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C7 /

Query: 2 SLPPLVTG 9
SLPP++ G
Sbjct: 214 SLPPIING 221


>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 SLPPLVTG 9
SLPP++ G
Sbjct: 214 SLPPIING 221


>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 2 SLPPLVTG 9
S+PP++ G
Sbjct: 214 SMPPIING 221


>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 SLPPLVTG 9
S+PP++ G
Sbjct: 208 SMPPIING 215


>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 SLPPLVTG 9
S+PP++ G
Sbjct: 208 SMPPIING 215


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SSLPPLV 7
S LPPLV
Sbjct: 1054 SQLPPLV 1060


>sp|SYFB_METM5|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C5 /

Query: 2 SLPPLVTG 9
S+PP++ G
Sbjct: 214 SMPPIING 221


>sp|SYFB_METM6|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C6 /

Query: 2 SLPPLVTG 9
S+PP++ G
Sbjct: 214 SMPPIING 221


>sp|FWDB_METMP|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanococcus

Query: 3 LPPLVTGV 10
LPP +TG+
Sbjct: 383 LPPAITGL 390


>sp|SYFB_METTH|PHENYLALANINE--TRNA ligase beta subunit|Methanothermobacter thermautotrophicus (strain

Query: 2 SLPPLVTG 9
S+PP++ G
Sbjct: 206 SMPPIING 213


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SLPPLVTG 9
+LPPL+ G
Sbjct: 345 ALPPLIIG 352


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 1 SSLPPL 6
SSLPPL
Sbjct: 68 SSLPPL 73


>sp|LEUC_THEKO|3-ISOPROPYLMALATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 SSLPPLV 7
SSLPP+V
Sbjct: 228 SSLPPMV 234


>sp|RNP1_AERPE|RIBONUCLEASE P protein component 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 LPPLVTGV 10
+PPL+TG+
Sbjct: 13 IPPLLTGL 20




228|Sequence|1136|1145|LVTGVLDRDV

>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 GVLDRDV 10
G+LDRDV
Sbjct: 174 GLLDRDV 180


>sp|NNRD_NITMS|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Nitrosopumilus maritimus (strain

Query: 1 LVTGVLDRDV 10
LV +LDRDV
Sbjct: 123 LVKSLLDRDV 132


>sp|UPPP_METBU|UNDECAPRENYL-DIPHOSPHATASE burtonii (strain DSM 6242

Query: 1 LVTGVLDRDV 10
+VTG+L R V
Sbjct: 131 IVTGILQRTV 140


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VTGVLDRDV 10
V GV+D DV
Sbjct: 584 VKGVIDSDV 592




229|Sequence|1141|1150|LDRDVPANVL

>sp|DHAS_METJA|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DRDVPANV 9
DRD+P N+
Sbjct: 59 DRDIPENI 66


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 LDRDVPANVL 10
+ RD+PA V+
Sbjct: 357 IQRDIPATVI 366


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 1 LDRDVPANVL 10
+ RD+PA V+
Sbjct: 351 IQRDIPATVI 360


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 1 LDRDVPAN 8
LD DVP N
Sbjct: 219 LDTDVPQN 226


>sp|LIPA_HALSA|LIPOYL synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LDRDVPANV 9
LD D PANV
Sbjct: 83 LDPDEPANV 91


>sp|LIPA_HALS3|LIPOYL synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LDRDVPANV 9
LD D PANV
Sbjct: 83 LDPDEPANV 91


>sp|PELO_METKA|PROTEIN pelota homolog|Methanopyrus kandleri (strain AV19 /

Query: 2 DRDVPANV 9
+RD+PA+V
Sbjct: 215 ERDIPAHV 222


>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 1 LDRDVPANVL 10
LDR++P +L
Sbjct: 182 LDREIPEYIL 191


>sp|MTTC_METBA|TRIMETHYLAMINE corrinoid protein|Methanosarcina barkeri

Query: 1 LDRDVPANVL 10
L RDVP N
Sbjct: 128 LGRDVPINTF 137


>sp|PSB1_NITMS|PROTEASOME subunit beta 1|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LDRDVPANVL 10
L RDVP N +
Sbjct: 77 LKRDVPPNTV 86


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LDRDVPANVL 10
+DRD P N L
Sbjct: 408 IDRDHPENYL 417


>sp|PGP_METTH|PHOSPHOGLYCOLATE phosphatase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LDRDVPANVL 10
L RDVPA+ +
Sbjct: 112 LTRDVPADTV 121


>sp|LIPA_NATPD|LIPOYL synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LDRDVPANV 9
LD D PANV
Sbjct: 84 LDPDEPANV 92


>sp|Y1084_METPE|UPF0212 protein Mpal_1084|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 RDVPANV 9
RDVP NV
Sbjct: 100 RDVPLNV 106




230|Sequence|1146|1155|PANVLLTNPQ

>sp|SUCC_IGNH4|SUCCINATE--COA ligase [ADP-forming] subunit beta|Ignicoccus hospitalis (strain

Query: 3 NVLLTNPQ 10
NVLL NP+
Sbjct: 293 NVLLKNPK 300


>sp|Y439_METJA|UNCHARACTERIZED ATP-binding protein MJ0439|Methanocaldococcus jannaschii (strain

Query: 3 NVLLTNPQ 10
N+L NPQ
Sbjct: 335 NILFLNPQ 342


>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 3 NVLLTNPQ 10
N+L NPQ
Sbjct: 339 NILFLNPQ 346


>sp|Y074_METJA|UNCHARACTERIZED ATP-binding protein MJ0074|Methanocaldococcus jannaschii (strain

Query: 3 NVLLTNPQ 10
N+L NPQ
Sbjct: 332 NILFLNPQ 339


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PANVLLTNPQ 10
P NVLL P+
Sbjct: 347 PTNVLLNPPR 356


>sp|Y819_METJA|PUTATIVE uncharacterized protein MJ0819|Methanocaldococcus jannaschii

Query: 3 NVLLTNPQ 10
N+L NPQ
Sbjct: 83 NILFLNPQ 90


>sp|SLAB_METS5|S-LAYER protein B|Metallosphaera sedula (strain ATCC 51363

Query: 3 NVLLTNPQ 10
NVL+ NPQ
Sbjct: 124 NVLVVNPQ 131


>sp|RS2_METBF|SMALL ribosomal subunit protein uS2|Methanosarcina barkeri (strain Fusaro

Query: 5 LLTNPQ 10
LLTNPQ
Sbjct: 131 LLTNPQ 136




231|Sequence|1151|1160|LTNPQLYKSG

>sp|LYSY_PYRCJ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 PQLYKSG 10
PQLY+SG
Sbjct: 85 PQLYESG 91


>sp|LYSY_SULAC|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LTNPQLYK 8
L NP+LYK
Sbjct: 104 LKNPELYK 111


>sp|LYSY_SACS2|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LTNPQLYK 8
L NP+LYK
Sbjct: 107 LKNPELYK 114


>sp|EF1A_SULTO|ELONGATION factor 1-alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 NPQLYKSG 10
NPQ KSG
Sbjct: 376 NPQFLKSG 383


>sp|Y3532_METJA|UNCHARACTERIZED protein MJECL32|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NPQLYKS 9
NP+LYKS
Sbjct: 157 NPRLYKS 163


>sp|RL18_PYRNV|LARGE ribosomal subunit protein uL18|Pyrobaculum neutrophilum (strain DSM

Query: 3 NPQLYKS 9
NP+LYK+
Sbjct: 159 NPELYKA 165


>sp|RS2_SULTO|SMALL ribosomal subunit protein uS2|Sulfurisphaera tokodaii (strain DSM

Query: 1 LTNPQL 6
LTNPQL
Sbjct: 125 LTNPQL 130


>sp|RL18_CALMQ|LARGE ribosomal subunit protein uL18|Caldivirga maquilingensis (strain

Query: 2 TNPQLYK 8
+NP+LYK
Sbjct: 159 SNPELYK 165


>sp|ENO_ARCFU|ENOLASE fulgidus (strain ATCC 49558

Query: 1 LTNPQLYKSG 10
+TNP++ K G
Sbjct: 297 VTNPEIIKKG 306


>sp|RL18_PYRIL|LARGE ribosomal subunit protein uL18|Pyrobaculum islandicum (strain DSM

Query: 3 NPQLYKS 9
NP+LYK+
Sbjct: 159 NPELYKT 165


>sp|TRUA_METBF|TRNA pseudouridine synthase A|Methanosarcina barkeri (strain Fusaro /

Query: 1 LTNPQLYKSG 10
+ NP++Y+ G
Sbjct: 203 MLNPEIYEEG 212


>sp|TRUA_METAC|TRNA pseudouridine synthase A|Methanosarcina acetivorans (strain ATCC

Query: 1 LTNPQLYKSG 10
+ NP++Y+ G
Sbjct: 203 MLNPEIYEEG 212


>sp|MOAA_METJA|PROBABLE GTP 3',8-cyclase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NPQLYK 8
NP+LYK
Sbjct: 120 NPELYK 125


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 PQLYKSG 10
P+LY+SG
Sbjct: 84 PKLYESG 90


>sp|RS2_NANEQ|SMALL ribosomal subunit protein uS2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LTNPQL 6
LTNPQL
Sbjct: 99 LTNPQL 104


>sp|LYSY_PYRIL|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 PQLYKSG 10
P+LY+SG
Sbjct: 85 PKLYESG 91


>sp|LYSY_PYRNV|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 PQLYKSG 10
P+LY+SG
Sbjct: 85 PKLYESG 91


>sp|RNH2_PYRAE|RIBONUCLEASE HII|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 NPQLYKSG 10
NP+ Y+SG
Sbjct: 106 NPKRYESG 113


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 3 NPQLYKSG 10
NP+ YK G
Sbjct: 183 NPEKYKEG 190


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 3 NPQLYKSG 10
NP+ YK G
Sbjct: 490 NPKTYKGG 497


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LTNPQLYK 8
L NP+L+K
Sbjct: 154 LKNPELFK 161


>sp|HDLB_ARCPA|HETERODISULFIDE reductase subunit B-like protein|Archaeoglobus profundus (strain

Query: 1 LTNPQLYK 8
LTNP++++
Sbjct: 94 LTNPEIHR 101


>sp|RS2_METMA|SMALL ribosomal subunit protein uS2|Methanosarcina mazei (strain ATCC

Query: 1 LTNPQLY 7
LTNPQ++
Sbjct: 131 LTNPQIH 137


>sp|RS2_METAC|SMALL ribosomal subunit protein uS2|Methanosarcina acetivorans (strain

Query: 1 LTNPQLY 7
LTNPQ++
Sbjct: 132 LTNPQIH 138


>sp|ASD_METJA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanocaldococcus

Query: 3 NPQLYKSG 10
NP+++K G
Sbjct: 55 NPEVFKDG 62


>sp|CDPAS_HYPBU|CDP-ARCHAEOL synthase|Hyperthermus butylicus (strain DSM 5456

Query: 3 NPQLYKSG 10
NP+LY +G
Sbjct: 76 NPKLYAAG 83


>sp|RS2_METBF|SMALL ribosomal subunit protein uS2|Methanosarcina barkeri (strain Fusaro

Query: 1 LTNPQLY 7
LTNPQ++
Sbjct: 132 LTNPQIH 138


>sp|DGGGP_METTH|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 LTNPQLYKSG 10
LT+P LY G
Sbjct: 207 LTSPSLYLLG 216




232|Sequence|1156|1165|LYKSGQNMEE

>sp|RS3_SACS2|SMALL ribosomal subunit protein uS3|Saccharolobus solfataricus (strain

Query: 1 LYKSGQNMEE 10
+YKSGQ +E+
Sbjct: 152 VYKSGQQLEK 161


>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii (strain

Query: 2 YKSGQNMEE 10
Y+ G+NMEE
Sbjct: 851 YEEGKNMEE 859


>sp|RS3_SULAC|SMALL ribosomal subunit protein uS3|Sulfolobus acidocaldarius (strain

Query: 1 LYKSGQNMEE 10
+YKSGQ +E+
Sbjct: 152 VYKSGQQLEK 161


>sp|RS7_PYRNV|SMALL ribosomal subunit protein uS7|Pyrobaculum neutrophilum (strain DSM

Query: 2 YKSGQN 7
YK+GQN
Sbjct: 122 YKTGQN 127


>sp|RS7_PYRIL|SMALL ribosomal subunit protein uS7|Pyrobaculum islandicum (strain DSM

Query: 2 YKSGQN 7
YK+GQN
Sbjct: 122 YKTGQN 127


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LYKSGQNME 9
LYKSG+ +E
Sbjct: 469 LYKSGKEIE 477


>sp|PSB1_AERPE|PROTEASOME subunit beta 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 LYKSGQNMEE 10
+YK G ++EE
Sbjct: 148 VYKRGMSLEE 157


>sp|HIS8_METAR|HISTIDINOL-PHOSPHATE aminotransferase|Methanocella arvoryzae (strain DSM 22066

Query: 2 YKSGQNMEE 10
Y +G+N+EE
Sbjct: 14 YVAGKNVEE 22


>sp|AMPPA_METVS|AMP phosphorylase|Methanococcus vannielii (strain ATCC 35089

Query: 2 YKSGQNMEE 10
Y +G NMEE
Sbjct: 132 YVNGMNMEE 140


>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LYKSGQNMEE 10
YK+G+ +EE
Sbjct: 360 FYKAGKKVEE 369


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 1 LYKSGQNMEE 10
LYK+ QN ++
Sbjct: 243 LYKTNQNTDD 252




233|Sequence|1161|1170|QNMEEYRPRT

>sp|RS5_METTH|SMALL ribosomal subunit protein uS5|Methanothermobacter

Query: 2 NMEEYRPRT 10
NMEE+ PRT
Sbjct: 6 NMEEWEPRT 14


>sp|RS5_SACS2|SMALL ribosomal subunit protein uS5|Saccharolobus solfataricus (strain

Query: 2 NMEEYRPRT 10
N+EE++PRT
Sbjct: 9 NIEEWKPRT 17


>sp|RS5_SACI1|SMALL ribosomal subunit protein uS5|Saccharolobus islandicus (strain

Query: 2 NMEEYRPRT 10
N+EE++PRT
Sbjct: 9 NIEEWKPRT 17


>sp|RS5_METS5|SMALL ribosomal subunit protein uS5|Metallosphaera sedula (strain ATCC

Query: 2 NMEEYRPRT 10
N+EE++PRT
Sbjct: 9 NVEEWKPRT 17


>sp|RS5_NANEQ|SMALL ribosomal subunit protein uS5|Nanoarchaeum equitans (strain

Query: 2 NMEEYRPRT 10
N+EE++P+T
Sbjct: 3 NIEEWQPKT 11


>sp|FLPA_THEAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermoplasma acidophilum (strain

Query: 1 QNMEEYRPRT 10
+NM+E++PR+
Sbjct: 164 RNMDEFQPRS 173


>sp|SAHH_SULAC|ADENOSYLHOMOCYSTEINASE acidocaldarius (strain ATCC 33909

Query: 1 QNMEEYRPR 9
QN+EEY+ R
Sbjct: 314 QNLEEYKLR 322


>sp|RS5_SULTO|SMALL ribosomal subunit protein uS5|Sulfurisphaera tokodaii (strain DSM

Query: 2 NMEEYRPRT 10
N EE++PRT
Sbjct: 9 NPEEWKPRT 17


>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 MEEYRPRT 10
+E+YRPRT
Sbjct: 8 VEKYRPRT 15


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QNMEEYR 7
QN++EYR
Sbjct: 352 QNLQEYR 358


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QNMEEYR 7
QN+EEY+
Sbjct: 353 QNLEEYK 359


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 4 EEYRPRT 10
E+YRPRT
Sbjct: 14 EKYRPRT 20


>sp|CAS1A_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 MEEYRP 8
MEE+RP
Sbjct: 233 MEEFRP 238


>sp|CAS1B_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 MEEYRPR 9
ME++RPR
Sbjct: 229 MEQWRPR 235


>sp|KAE1_METBU|TRNA N6-adenosine threonylcarbamoyltransferase|Methanococcoides

Query: 4 EEYRPRT 10
E YRP+T
Sbjct: 30 ETYRPKT 36


>sp|RFCS_NATPD|REPLICATION factor C small subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 3 MEEYRPRT 10
+E+YRP+T
Sbjct: 15 IEKYRPQT 22


>sp|RFCL_PYRIL|REPLICATION factor C large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 3 MEEYRPRT 10
+E+YRP+T
Sbjct: 6 VEKYRPKT 13


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 EEYRPRT 10
E+YRPRT
Sbjct: 14 EKYRPRT 20


>sp|RFCL_META3|REPLICATION factor C large subunit|Methanococcus aeolicus (strain ATCC

Query: 3 MEEYRPRT 10
+E+YRP+T
Sbjct: 4 VEKYRPKT 11


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 MEEYRPRT 10
+E+YRP+T
Sbjct: 10 VEKYRPKT 17


>sp|RFCS_AERPE|REPLICATION factor C small subunit|Aeropyrum pernix (strain ATCC 700893

Query: 3 MEEYRPRT 10
+E+YRPR+
Sbjct: 10 VEKYRPRS 17


>sp|RFCS_THEPD|REPLICATION factor C small subunit|Thermofilum pendens (strain DSM 2475

Query: 3 MEEYRPRT 10
+E+YRPR+
Sbjct: 7 VEKYRPRS 14


>sp|RFCS_SACS2|REPLICATION factor C small subunit|Saccharolobus solfataricus (strain ATCC

Query: 4 EEYRPRT 10
E+YRP+T
Sbjct: 12 EKYRPKT 18


>sp|Y812_METJA|UNCHARACTERIZED protein MJ0812|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EEYRPRT 10
EEY+P+T
Sbjct: 183 EEYKPKT 189


>sp|Y079_METJA|UNCHARACTERIZED protein MJ0079|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EEYRPRT 10
EEY+P+T
Sbjct: 189 EEYKPKT 195


>sp|RFCS_METHJ|REPLICATION factor C small subunit|Methanospirillum hungatei JF-1 (strain

Query: 3 MEEYRPR 9
+E+YRPR
Sbjct: 9 IEKYRPR 15


>sp|RFCS2_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 MEEYRPRT 10
E+YRPR+
Sbjct: 7 FEKYRPRS 14


>sp|RFCS_HALMA|REPLICATION factor C small subunit|Haloarcula marismortui (strain ATCC 43049

Query: 3 MEEYRPRT 10
+E+YRP+T
Sbjct: 17 IEKYRPQT 24


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 MEEYRPRT 10
E+YRPR+
Sbjct: 7 FEKYRPRS 14


>sp|RFCS_METMJ|REPLICATION factor C small subunit|Methanoculleus marisnigri (strain ATCC

Query: 3 MEEYRPR 9
+E+YRPR
Sbjct: 9 IEKYRPR 15


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 3 MEEYRPRT 10
E+YRPR+
Sbjct: 7 FEKYRPRS 14


>sp|RFCS1_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 MEEYRPRT 10
E+YRPR+
Sbjct: 7 FEKYRPRS 14


>sp|RFCS_METAR|REPLICATION factor C small subunit|Methanocella arvoryzae (strain DSM 22066

Query: 4 EEYRPR 9
E+YRPR
Sbjct: 9 EKYRPR 14


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 4 EEYRPRT 10
E+YRP+T
Sbjct: 15 EKYRPKT 21


>sp|RFCS1_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 MEEYRPRT 10
E+YRPR+
Sbjct: 7 FEKYRPRS 14


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 MEEYRPRT 10
+E+YRP T
Sbjct: 18 IEKYRPAT 25


>sp|RFCS_METM7|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C7 /

Query: 3 MEEYRPRT 10
+E+YRP+T
Sbjct: 6 VEKYRPQT 13


>sp|RFCS_SULTO|REPLICATION factor C small subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 EEYRPRT 10
E+YRPR+
Sbjct: 11 EKYRPRS 17


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 MEEYRPRT 10
+E+YRP+T
Sbjct: 4 VEKYRPKT 11


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain

Query: 4 EEYRPR 9
E+YRPR
Sbjct: 5 EKYRPR 10


>sp|RFCS_METM5|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C5 /

Query: 3 MEEYRPRT 10
+E+YRP T
Sbjct: 6 VEKYRPET 13


>sp|LIPA_SULAC|LIPOYL synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 NMEEYR 7
NMEEY+
Sbjct: 237 NMEEYK 242


>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 EEYRPRT 10
E+YRPR+
Sbjct: 8 EKYRPRS 14


>sp|RFCS_METST|REPLICATION factor C small subunit|Methanosphaera stadtmanae (strain ATCC

Query: 3 MEEYRPRT 10
+E+YRP+T
Sbjct: 6 VEKYRPQT 13


>sp|RFCS_METMP|REPLICATION factor C small subunit|Methanococcus maripaludis (strain DSM

Query: 3 MEEYRPRT 10
+E+YRP T
Sbjct: 6 VEKYRPET 13


>sp|RFCS_METM6|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C6 /

Query: 3 MEEYRPRT 10
+E+YRP T
Sbjct: 6 VEKYRPET 13


>sp|RFCL_PYRAB|REPLICATION factor C large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 MEEYRPR 9
+E+YRPR
Sbjct: 7 VEKYRPR 13


>sp|RFCS1_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 4 EEYRPRT 10
E+YRPR+
Sbjct: 8 EKYRPRS 14




234|Sequence|1166|1175|YRPRTFWFNM

>sp|RFCL_METBU|REPLICATION factor C large subunit|Methanococcoides burtonii (strain DSM 6242

Query: 1 YRPRTFWFNM 10
Y+P +FW M
Sbjct: 336 YQPPSFWRKM 345


>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 YRPRTF 6
YRPR+F
Sbjct: 10 YRPRSF 15


>sp|RFCS2_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YRPRTF 6
YRPR+F
Sbjct: 10 YRPRSF 15


>sp|MANB_METJA|PHOSPHOMANNOMUTASE jannaschii (strain ATCC 43067

Query: 4 RTFWFNM 10
+ FWFN+
Sbjct: 404 KNFWFNL 410


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YRPRTF 6
YRPR+F
Sbjct: 10 YRPRSF 15


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YRPRTF 6
YRPR+F
Sbjct: 10 YRPRSF 15


>sp|RFCL_PYRIL|REPLICATION factor C large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YRPRTF 6
YRP+TF
Sbjct: 9 YRPKTF 14


>sp|RFCS1_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YRPRTF 6
YRPR+F
Sbjct: 10 YRPRSF 15


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 RPRTFW 7
RPR +W
Sbjct: 479 RPRVYW 484


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 YRPRTFWFNM 10
YRP F FN+
Sbjct: 734 YRPGRFSFNV 743


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 1 YRPRTFW 7
YR R FW
Sbjct: 165 YRTREFW 171


>sp|RFCS1_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YRPRTF 6
YRPR+F
Sbjct: 10 YRPRSF 15


>sp|RFCS1_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YRPRTF 6
YRPR+F
Sbjct: 10 YRPRSF 15


>sp|PNPH_PYRFU|6-OXOPURINE nucleoside phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RPRTFW 7
RPRTF+
Sbjct: 109 RPRTFY 114


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RPRTFW 7
RP T+W
Sbjct: 484 RPETYW 489


>sp|AGOG_PYRHO|N-GLYCOSYLASE/DNA lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RPRTFWFNM 10
RPR FW +
Sbjct: 188 RPRDFWMKI 196


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YRPRTF---WFN 9
YRP TF W N
Sbjct: 364 YRPETFRRYWIN 375


>sp|RL6_METMA|LARGE ribosomal subunit protein uL6|Methanosarcina mazei (strain ATCC

Query: 4 RTFWF 8
RTFW+
Sbjct: 35 RTFWY 39


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 YRPRTF---WFN 9
YRP TF W N
Sbjct: 365 YRPETFRRYWIN 376


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 YRPRTFW 7
Y P T+W
Sbjct: 330 YSPPTYW 336


>sp|CSG_METMA|MAJOR S-layer protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YRPRTFWFN 9
YRP W N
Sbjct: 108 YRPAAGWSN 116


>sp|Y1546_ARCFU|UNCHARACTERIZED MscS family protein AF_1546|Archaeoglobus fulgidus (strain ATCC

Query: 1 YRPRTFWFNM 10
+ P T W+N+
Sbjct: 229 WAPSTEWYNV 238


>sp|COXX_SULTO|PROTOHEME IX farnesyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RPRTFW 7
+PRT+W
Sbjct: 148 KPRTWW 153


>sp|AGOG_PYRAB|N-GLYCOSYLASE/DNA lyase|Pyrococcus abyssi (strain GE5 /

Query: 2 RPRTFWFNM 10
+PR FW +
Sbjct: 188 KPRKFWMKI 196


>sp|Y2105_SACS2|UNCHARACTERIZED protein SSO2105|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 RTFWFN 9
RTFW++
Sbjct: 238 RTFWYS 243


>sp|Y1589_METAC|UPF0228 protein MA_1589|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PRTFW 7
PRT+W
Sbjct: 170 PRTYW 174




235|Sequence|1171|1180|FWFNMADAAF

>sp|Y1428_METJA|TPR repeat-containing protein MJ1428|Methanocaldococcus jannaschii

Query: 2 WFNMADAAF 10
WFN+A A +
Sbjct: 51 WFNLAYALY 59


>sp|HBCL2_METS5|4-HYDROXYBUTYRATE--COA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 WFNMADAA 9
WF+ DAA
Sbjct: 420 WFHSGDAA 427




236|Sequence|1176|1185|ADAAFQSLVC

***** No hits found ******


237|Sequence|1181|1190|QSLVCFSIPY

>sp|TRPG_HALSA|ANTHRANILATE synthase component 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 QSLVCFSIP 9
SLVC SIP
Sbjct: 136 HSLVCTSIP 144


>sp|Y943_METJA|UNCHARACTERIZED protein MJ0943|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QSLVCFSI 8
++LVCFSI
Sbjct: 9 KALVCFSI 16




238|Sequence|1186|1195|FSIPYLAYYD

>sp|KPRS_SULAC|RIBOSE-PHOSPHATE pyrophosphokinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 IPYLAY 8
IPYLAY
Sbjct: 86 IPYLAY 91


>sp|KPRS_PYRAB|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus abyssi (strain GE5 /

Query: 3 IPYLAY 8
IPYLAY
Sbjct: 84 IPYLAY 89


>sp|RL22_THEAC|LARGE ribosomal subunit protein uL22|Thermoplasma acidophilum (strain

Query: 1 FSIPYLAYYD 10
++IPY Y D
Sbjct: 57 YAIPYFRYLD 66


>sp|KPRS_SULTO|RIBOSE-PHOSPHATE pyrophosphokinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 IPYLAY 8
+PYLAY
Sbjct: 86 VPYLAY 91


>sp|KPRS_SACS2|RIBOSE-PHOSPHATE pyrophosphokinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 IPYLAY 8
+PYLAY
Sbjct: 86 VPYLAY 91


>sp|KPRS_PYRHO|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IPYLAY 8
+PYLAY
Sbjct: 84 VPYLAY 89


>sp|RL22_THEVO|LARGE ribosomal subunit protein uL22|Thermoplasma volcanium (strain

Query: 1 FSIPYLAYYD 10
++IPY Y D
Sbjct: 54 YAIPYFRYLD 63


>sp|KPRS_PYRFU|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IPYLAY 8
IPY+AY
Sbjct: 81 IPYMAY 86


>sp|Y182_ARCFU|UNCHARACTERIZED protein AF_0182|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FSIPYLAYYD 10
FS+PY+ YD
Sbjct: 9 FSLPYVNSYD 18


>sp|RNP2_METJA|RIBONUCLEASE P protein component 2|Methanocaldococcus jannaschii (strain ATCC

Query: 4 PYLAYYD 10
P+L YYD
Sbjct: 56 PWLVYYD 62


>sp|GLME_HALSA|GLUTAMATE mutase epsilon subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 FSIPYLAYYD 10
+++PY + YD
Sbjct: 173 YNLPYTSAYD 182


>sp|KPRS_METKA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanopyrus kandleri (strain AV19 /

Query: 3 IPYLAY 8
+PY+AY
Sbjct: 85 VPYMAY 90


>sp|RNJL_SACS2|RNASE aCSPSF2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SIPYLAYYD 10
+ PY YYD
Sbjct: 313 NFPYPVYYD 321


>sp|RL10E_THEGJ|LARGE ribosomal subunit protein uL16|Thermococcus gammatolerans (strain

Query: 3 IPYLAYY 9
+PY AYY
Sbjct: 156 LPYSAYY 162


>sp|RL10E_THEON|LARGE ribosomal subunit protein uL16|Thermococcus onnurineus (strain NA1)

Query: 3 IPYLAYY 9
+PY AYY
Sbjct: 156 LPYSAYY 162


>sp|RL10E_THEKO|LARGE ribosomal subunit protein uL16|Thermococcus kodakarensis (strain

Query: 3 IPYLAYY 9
+PY AYY
Sbjct: 156 LPYSAYY 162


>sp|CBIM_ARCFU|PUTATIVE cobalt transport protein CbiM|Archaeoglobus fulgidus (strain ATCC

Query: 1 FSIPYLAY 8
F+IP+L Y
Sbjct: 19 FAIPFLVY 26


>sp|RRP4_SULTO|EXOSOME complex component Rrp4|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FSIPYLAYY 9
F IP+ YY
Sbjct: 25 FQIPWSPYY 33


>sp|HCGC_METJA|6-CARBOXYMETHYL-5-METHYL-4-HYDROXYPYRIDIN-2-OL 3-C-methyltransferase HcgC|Methanocaldococcus jannaschii (strain

Query: 1 FSIPYLAYYD 10
++IP L YY+
Sbjct: 208 YAIPNLRYYE 217


>sp|ENDA_THEON|TRNA-SPLICING endonuclease|Thermococcus onnurineus (strain NA1)

Query: 1 FSIPYLAYYD 10
F I YL Y D
Sbjct: 80 FDIKYLVYKD 89


>sp|PURO_META3|IMP cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FSIPYLAY 8
F+ PY+AY
Sbjct: 53 FANPYIAY 60


>sp|ENDA_PYRAB|TRNA-SPLICING endonuclease|Pyrococcus abyssi (strain GE5 /

Query: 1 FSIPYLAYYD 10
F I YL Y D
Sbjct: 80 FDIKYLVYKD 89


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 FSIPYLAYY 9
F PYL YY
Sbjct: 364 FGNPYLNYY 372


>sp|Y795_METJA|UNCHARACTERIZED protein MJ0795|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SIPYLAYYD 10
SIP + Y+D
Sbjct: 338 SIPIVIYFD 346




239|Sequence|1191|1200|LAYYDSNVDL

>sp|Y1349_METJA|UNCHARACTERIZED protein MJ1349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YDSNVDL 10
YD NVDL
Sbjct: 337 YDENVDL 343


>sp|ASPD_METM5|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 LAYYDSNVD 9
LA+YD N++
Sbjct: 31 LAFYDGNLE 39


>sp|IF2G_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 2 AYYDSNVDL 10
AY+++N+D+
Sbjct: 180 AYHNTNIDI 188


>sp|ASPD_METM6|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C6 /

Query: 1 LAYYDSNVD 9
LA+YD N++
Sbjct: 31 LAFYDGNLE 39


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YYDSNVDL 10
YYD N+D+
Sbjct: 252 YYDENIDI 259


>sp|ASPD_METMP|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LAYYDSNVD 9
LA+YD N++
Sbjct: 31 LAFYDGNLE 39


>sp|RADB_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 3 YYDSNVD 9
YYDSN +
Sbjct: 155 YYDSNTN 161


>sp|ASPD_METM7|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 LAYYDSNVD 9
LA+YD N++
Sbjct: 31 LAFYDGNLE 39


>sp|CBIA_METAC|COBYRINATE a,c-diamide synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 YYDSNVDL 10
YY N+DL
Sbjct: 285 YYRDNIDL 292


>sp|PUR5_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LAYYDSNVDL 10
L Y DS VD+
Sbjct: 6 LTYADSGVDI 15


>sp|PUR5_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LAYYDSNVDL 10
L Y DS VD+
Sbjct: 6 LTYADSGVDI 15


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 4 YDSNVD 9
YD+NVD
Sbjct: 441 YDANVD 446


>sp|PUR5_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LAYYDSNVDL 10
L Y DS VD+
Sbjct: 6 LTYADSGVDI 15


>sp|RADB_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 3 YYDSN 7
YYDSN
Sbjct: 159 YYDSN 163


>sp|PUR5_METBU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LAYYDSNVDL 10
L Y DS VD+
Sbjct: 6 LTYADSGVDI 15


>sp|KAE1B_METBF|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 LAYYDSNVD 9
LAYYD ++
Sbjct: 482 LAYYDKGLE 490


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 YYDSNV 8
YYD NV
Sbjct: 441 YYDENV 446


>sp|ARCH_ARCFU|PROTEIN archease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LAYYDSNVD 9
LA+YD+ VD
Sbjct: 30 LAFYDAFVD 38


>sp|CBIA_METBF|COBYRINATE a,c-diamide synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 YYDSNVDL 10
YY N+DL
Sbjct: 282 YYRDNIDL 289


>sp|HFLX_METJA|GTPASE HflX|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AYYDSNVDL 10
A YD N+DL
Sbjct: 329 AKYDINMDL 337


>sp|MOAA_PYRAE|PROBABLE GTP 3',8-cyclase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 YYDSNVDL 10
Y DS+VDL
Sbjct: 270 YADSSVDL 277


>sp|CBIA_SULTO|COBYRINATE a,c-diamide synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YYDSNVDL 10
YY N+DL
Sbjct: 255 YYSENIDL 262


>sp|PSTB_METST|PHOSPHATE import ATP-binding protein PstB|Methanosphaera stadtmanae (strain

Query: 4 YDSNVDL 10
YD+NVD+
Sbjct: 75 YDNNVDV 81


>sp|ENO_PICTO|ENOLASE torridus (strain ATCC 700027

Query: 1 LAYYDSNVD 9
+AY D+N+D
Sbjct: 49 IAYPDNNID 57




240|Sequence|1196|1205|SNVDLFTWGT

>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 2 NVDLFTWGT 10
+VDLF +GT
Sbjct: 114 SVDLFIYGT 122


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 4 DLFTWG 9
DLF WG
Sbjct: 1019 DLFEWG 1024


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 VDLFTW 8
VDLF W
Sbjct: 600 VDLFQW 605


>sp|DPH2_METJA|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NVDLFTWG 9
N++++ WG
Sbjct: 69 NIEIYLWG 76


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SNVDLF 6
SNVDLF
Sbjct: 792 SNVDLF 797


>sp|TRPG_METJA|ANTHRANILATE synthase component 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NVDLFTW 8
N+D F W
Sbjct: 11 NIDSFVW 17


>sp|SPEH_ARCFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NVDLFTWG 9
N+D+FT G
Sbjct: 76 NLDIFTCG 83


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SNVDLFTWGT 10
S +D+F W T
Sbjct: 629 SALDVFFWNT 638




241|Sequence|1201|1210|FTWGTPIVTI

>sp|PSB2_THEGJ|PROTEASOME subunit beta 2|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FTWGTPIVT 9
FTWG P+ T
Sbjct: 75 FTWGRPMTT 83


>sp|PSB2_THEON|PROTEASOME subunit beta 2|Thermococcus onnurineus (strain NA1)

Query: 1 FTWGTPIVT 9
FTWG P+ T
Sbjct: 75 FTWGKPMST 83


>sp|RASEA_METAC|ARCHAEOSINE synthase subunit beta|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FTWGTPIV 8
FT+GTPI+
Sbjct: 338 FTYGTPIL 345


>sp|PSB1_PYRFU|PROTEASOME subunit beta 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FTWGTPIVT 9
FTWG P+ T
Sbjct: 74 FTWGRPMTT 82


>sp|PSB1_PYRAB|PROTEASOME subunit beta 1|Pyrococcus abyssi (strain GE5 /

Query: 1 FTWGTPIVT 9
FTWG P+ T
Sbjct: 74 FTWGRPMTT 82


>sp|PSB2_THEKO|PROTEASOME subunit beta 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FTWGTPI 7
FTWG P+
Sbjct: 74 FTWGRPM 80


>sp|Y601_METAC|MEMO1 family protein MA_0601|Methanosarcina acetivorans (strain ATCC

Query: 2 TWGTPIVTI 10
TW TP+ TI
Sbjct: 88 TWKTPLGTI 96


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FTWGTPI 7
TWG PI
Sbjct: 231 LTWGVPI 237


>sp|PSB2_THESM|PROTEASOME subunit beta 2|Thermococcus sibiricus (strain DSM 12597

Query: 1 FTWGTPI 7
FTWG P+
Sbjct: 74 FTWGKPM 80


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 WGTPI 7
WGTPI
Sbjct: 423 WGTPI 427


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 3 WGTPIV 8
WG PIV
Sbjct: 621 WGIPIV 626


>sp|Y1182_METJA|UNCHARACTERIZED protein MJ1182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FTWGTPI 7
+TW TPI
Sbjct: 204 YTWITPI 210


>sp|AGL5_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl5|Haloferax volcanii

Query: 1 FTWGTPIVT 9
F +G PI+T
Sbjct: 298 FAFGKPIIT 306


>sp|PSB1_PYRHO|PROTEASOME subunit beta 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FTWGTPIVT 9
F WG P+ T
Sbjct: 74 FAWGRPMTT 82


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 TWGTPIVT 9
TW TPI T
Sbjct: 555 TWLTPIQT 562


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 TWGTPIVT 9
TW TPI T
Sbjct: 555 TWLTPIQT 562


>sp|OFOA2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 1 FTWGTP 6
TWG+P
Sbjct: 518 LTWGSP 523


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 WGTPI 7
WGTP+
Sbjct: 455 WGTPL 459


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 WGTPI 7
WGTP+
Sbjct: 455 WGTPL 459


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 2 TWGTPIVT 9
T+GTP+++
Sbjct: 503 TFGTPVIS 510


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 WGTPI 7
WGTP+
Sbjct: 455 WGTPL 459


>sp|OFOA_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Saccharolobus solfataricus (Sulfolobus

Query: 2 TWGTP 6
TWG+P
Sbjct: 523 TWGSP 527


>sp|OFOA1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 2 TWGTP 6
TWG+P
Sbjct: 521 TWGSP 525


>sp|OFOA_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Sulfolobus sp

Query: 2 TWGTP 6
TWG+P
Sbjct: 521 TWGSP 525


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 3 WGTPIV 8
WG P+V
Sbjct: 642 WGIPVV 647


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 WGTPI 7
WGTP+
Sbjct: 458 WGTPL 462


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 4 GTPIVTI 10
GTPI+T+
Sbjct: 88 GTPIITM 94


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 WGTPI 7
WGTP+
Sbjct: 458 WGTPL 462


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 3 WGTPIV 8
WG P+V
Sbjct: 500 WGIPVV 505


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 WGTPI 7
WGTP+
Sbjct: 461 WGTPL 465


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 WGTPI 7
WGTP+
Sbjct: 461 WGTPL 465


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 WGTPI 7
WGTP+
Sbjct: 398 WGTPL 402


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 WGTPI 7
WGTP+
Sbjct: 464 WGTPL 468




242|Sequence|1206|1215|PIVTIALLTF

>sp|Y4223_METAC|UPF0228 protein MA_4223|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IVTIALLTF 10
+V IALLTF
Sbjct: 9 VVFIALLTF 17


>sp|Y393_METMA|UPF0228 protein MM_0393|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IVTIALLTF 10
+V IALLTF
Sbjct: 9 VVFIALLTF 17


>sp|MNTP_METTH|MANGANESE exporter MntP|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PIVTIALLTF 10
P++ I L+TF
Sbjct: 131 PVIVIGLITF 140


>sp|RL18E_METAC|LARGE ribosomal subunit protein eL18|Methanosarcina acetivorans (strain

Query: 3 VTIALLTF 10
VTIA LTF
Sbjct: 84 VTIAALTF 91


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PIVTIALL 8
PI+TIALL
Sbjct: 325 PILTIALL 332




243|Sequence|1211|1220|ALLTFLLHLG

***** No hits found ******


244|Sequence|1216|1225|LLHLGIETKT

>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LLHLGIETKT 10
L H GIET+T
Sbjct: 324 LKHAGIETQT 333


>sp|RADA_IGNH4|DNA repair and recombination protein|Ignicoccus hospitalis (strain

Query: 1 LLHLGIETKT 10
LL GIETKT
Sbjct: 98 LLGGGIETKT 107


>sp|RADA_AERPX|DNA repair and recombination protein|Aeropyrum pernix

Query: 1 LLHLGIETKT 10
LL GIETKT
Sbjct: 96 LLGGGIETKT 105


>sp|RADA_AERPE|DNA repair and recombination protein|Aeropyrum pernix (strain ATCC

Query: 1 LLHLGIETKT 10
LL GIETKT
Sbjct: 96 LLGGGIETKT 105


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 1 LLHLGIE 7
LLH+GI+
Sbjct: 2 LLHIGID 8


>sp|CAS4_SACS2|CRISPR-ASSOCIATED exonuclease Cas4|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LLHLGIET 8
+LHLG+E+
Sbjct: 60 ILHLGLES 67


>sp|GUAAA_PYRHO|GMP synthase [glutamine-hydrolyzing] subunit A|Pyrococcus horikoshii

Query: 1 LLHLGIETK 9
L +LG+ETK
Sbjct: 20 LRYLGVETK 28


>sp|RADA_DESAM|DNA repair and recombination protein|Desulfurococcus amylolyticus

Query: 1 LLHLGIETKT 10
LL G+ETKT
Sbjct: 103 LLGGGVETKT 112


>sp|RADA_DESA1|DNA repair and recombination protein|Desulfurococcus amylolyticus

Query: 1 LLHLGIETKT 10
LL G+ETKT
Sbjct: 103 LLGGGVETKT 112




245|Sequence|1221|1230|IETKTWTWLN

>sp|MTXH_METMA|PUTATIVE methyltransferase mtx subunit H|Methanosarcina mazei (strain ATCC

Query: 6 WTWLN 10
W WLN
Sbjct: 234 WNWLN 238


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 6 WTWLN 10
W WLN
Sbjct: 234 WNWLN 238


>sp|MTXH_METAC|PUTATIVE methyltransferase mtx subunit H|Methanosarcina acetivorans (strain

Query: 6 WTWLN 10
W WLN
Sbjct: 234 WNWLN 238


>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 5 TWTWLN 10
+WTW++
Sbjct: 59 SWTWIH 64


>sp|CAS1B_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 KTWTWL 9
K W WL
Sbjct: 104 KKWVWL 109


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 6 WTWLN 10
WTW++
Sbjct: 263 WTWMS 267


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 6 WTWLN 10
WTW++
Sbjct: 259 WTWMS 263


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 6 WTWLN 10
WTW++
Sbjct: 259 WTWMS 263


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 6 WTWLN 10
WTW++
Sbjct: 262 WTWMS 266


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 6 WTWLN 10
WTW++
Sbjct: 262 WTWMS 266


>sp|TRUD_PYRNV|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum neutrophilum (strain

Query: 6 WTWLN 10
WTW++
Sbjct: 60 WTWIH 64


>sp|TRUD_PYRAR|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum arsenaticum (strain DSM

Query: 6 WTWLN 10
WTW++
Sbjct: 60 WTWIH 64


>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 6 WTWLN 10
WTW++
Sbjct: 60 WTWIH 64


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 1 IETKTWTWL 9
+ETKT W+
Sbjct: 315 LETKTPEWI 323


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 2 ETKTWTW 8
ET+ W W
Sbjct: 259 ETRPWDW 265


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 TWTWL 9
TW WL
Sbjct: 678 TWEWL 682


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 TWTWL 9
TW WL
Sbjct: 676 TWEWL 680


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 5 TWTWL 9
TW WL
Sbjct: 676 TWEWL 680




246|Sequence|1226|1235|WTWLNWITCG

>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WTWLNW 6
W WL W
Sbjct: 422 WLWLKW 427


>sp|Y1562_ARCFU|UNCHARACTERIZED protein AF_1562|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WTWLNWITCG 10
W W+N++T G
Sbjct: 74 WGWINYVTYG 83


>sp|DNLI1_METBF|DNA ligase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 WTWLNW 6
W WL W
Sbjct: 389 WFWLKW 394


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 NWITCG 10
NW TCG
Sbjct: 329 NWTTCG 334


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 2 TWLNWITC 9
TW++W C
Sbjct: 241 TWVDWDLC 248


>sp|DTDA_THEON|D-AMINOACYL-TRNA deacylase|Thermococcus onnurineus (strain NA1)

Query: 4 LNWITC 9
LNWI C
Sbjct: 130 LNWIIC 135


>sp|AATC_THEGJ|A-TYPE ATP synthase subunit C|Thermococcus gammatolerans (strain DSM

Query: 1 WTWLNWIT 8
+TWL W T
Sbjct: 18 FTWLGWKT 25


>sp|FENR2_SULAC|FERREDOXIN--NADP reductase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 WLNWIT 8
W++WIT
Sbjct: 85 WVDWIT 90


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WTWLNW 6
W W W
Sbjct: 421 WFWFKW 426


>sp|TDXH1_PICTO|PEROXIREDOXIN 1|Picrophilus torridus (strain ATCC 700027

Query: 3 WLNWI 7
W+NWI
Sbjct: 83 WINWI 87


>sp|AATC_THEKO|A-TYPE ATP synthase subunit C|Thermococcus kodakarensis (strain ATCC

Query: 1 WTWLNWIT 8
+TW+ W T
Sbjct: 17 FTWVGWKT 24


>sp|TDXH1_THEAC|PEROXIREDOXIN 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 WLNWI 7
W+NWI
Sbjct: 85 WVNWI 89


>sp|Y275_METJA|UNCHARACTERIZED protein MJ0275|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WLNW 6
W+NW
Sbjct: 191 WMNW 194


>sp|SYP_SULTO|PROLINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 WLNWI 7
WL+W+
Sbjct: 15 WLDWV 19


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 4 LNWITCG 10
+ W+ CG
Sbjct: 491 MQWVPCG 497


>sp|MPTE_METTH|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 3 WLNWIT 8
WL W T
Sbjct: 6 WLRWYT 11


>sp|NPD_AERPE|NAD-DEPENDENT protein deacylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WTWLNW 6
W W +W
Sbjct: 63 WEWYSW 68


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TWLNW 6
TW NW
Sbjct: 221 TWQNW 225




247|Sequence|1231|1240|WITCGFSVLL

>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 1 WITCGFSVLL 10
W CGFSV L
Sbjct: 667 WCDCGFSVDL 676


>sp|AGL6_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl6|Haloferax volcanii

Query: 1 WITCGFSVL 9
W+T GFS L
Sbjct: 374 WVTSGFSAL 382


>sp|TH11_HALSA|PROBABLE transposase for insertion sequence|Halobacterium salinarum

Query: 1 WITCGF 6
W++CGF
Sbjct: 85 WLSCGF 90


>sp|TH11_HALS3|PROBABLE transposase for insertion sequence|Halobacterium salinarum

Query: 1 WITCGF 6
W++CGF
Sbjct: 85 WLSCGF 90


>sp|DCDB_METLZ|DCTP deaminase, dUMP-forming|Methanocorpusculum labreanum (strain ATCC

Query: 1 WITCGFS 7
WI GFS
Sbjct: 115 WIDAGFS 121


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WITCG 5
W TCG
Sbjct: 330 WTTCG 334


>sp|HIS4_META3|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus aeolicus (strain

Query: 1 WITCG 5
WI CG
Sbjct: 39 WIKCG 43


>sp|Y1038_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 1 WITCGFSVLL 10
WI GFS+L+
Sbjct: 170 WIWTGFSMLM 179




248|Sequence|1236|1245|FSVLLFFTVA

>sp|DGGGP_METLZ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanocorpusculum labreanum (strain ATCC

Query: 1 FSVLLFFTV 9
FSVLLFF V
Sbjct: 36 FSVLLFFIV 44


>sp|Y2423_ARCFU|UNCHARACTERIZED protein AF_2423|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FSVLLFFTVA 10
+SVL+FF ++
Sbjct: 57 YSVLIFFNIS 66




249|Sequence|1241|1250|FFTVALIYNA

>sp|MALE_PYRAB|MALTOTRIOSE-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 3 TVALIYN 9
TVA+IYN
Sbjct: 189 TVAMIYN 195


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TVALIYN 9
TVA+IYN
Sbjct: 170 TVAIIYN 176


>sp|KPRS_METJA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FFTVALIY 8
FFT+ IY
Sbjct: 132 FFTIPFIY 139




250|Sequence|1246|1255|LIYNASCATC

>sp|DNAJ_NATPD|CHAPERONE protein DnaJ|Natronomonas pharaonis (strain ATCC 35678

Query: 2 IYNASCATC 10
IY+ +C+TC
Sbjct: 206 IYSETCSTC 214


>sp|THIRX_METTH|THIOREDOXIN thermautotrophicus (strain ATCC 29096

Query: 2 IYNASCATC 10
IY CA C
Sbjct: 6 IYGTGCANC 14


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IYNASCATC 10
+ NA CA C
Sbjct: 168 LVNAKCALC 176


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IYNASCATC 10
IY SC C
Sbjct: 11 IYTRSCPNC 19


>sp|G3P_HALVA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula vallismortis (Halobacterium vallismortis)

Query: 1 LIYNASCAT 9
++ NASC T
Sbjct: 150 VVSNASCTT 158


>sp|TRM1_ARCFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Archaeoglobus fulgidus

Query: 3 YNASCATC 10
Y A C+TC
Sbjct: 217 YLAYCSTC 224




251|Sequence|1251|1260|SCATCYPPSN

>sp|RIFK_HALWD|RIBOFLAVIN kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 ATCYP 7
ATCYP
Sbjct: 174 ATCYP 178


>sp|CCA_HALMA|CCA-ADDING enzyme|Haloarcula marismortui (strain ATCC 43049

Query: 5 CYPPS 9
C+PPS
Sbjct: 73 CFPPS 77


>sp|CBIH_METTH|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanothermobacter

Query: 1 SCATCYPP 8
+CA CY P
Sbjct: 275 NCAFCYCP 282


>sp|AAT_THEKO|ASPARTATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SCATCYPP 8
S TC PP
Sbjct: 228 STVTCVPP 235


>sp|CAS8_THETK|CRISPR system associated protein Cas8|Thermoproteus tenax (strain ATCC

Query: 2 CATCYPPS 9
CATC+ S
Sbjct: 176 CATCFALS 183


>sp|HAS8_HALS8|HALOCIN-S8 S8a

Query: 1 SCATCYP 7
SCA C P
Sbjct: 252 SCALCSP 258


>sp|ARSR2_HALSA|PUTATIVE arsenical resistance operon repressor|Halobacterium salinarum

Query: 1 SCATCYPPSN 10
S A C PP N
Sbjct: 14 SDACCAPPGN 23


>sp|HDRC2_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 2 CATCY 6
C TCY
Sbjct: 79 CTTCY 83


>sp|MOAA_METMA|PROBABLE GTP 3',8-cyclase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CATCYPPSN 10
C TC P N
Sbjct: 54 CCTCGPVGN 62




252|Sequence|1256|1265|YPPSNPYWTM

>sp|SYC_METS5|CYSTEINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 YPPSNPYW 8
Y P PYW
Sbjct: 182 YKPGEPYW 189


>sp|COFE_METMA|COENZYME F420:L-glutamate ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YPPSNP 6
YPP NP
Sbjct: 120 YPPENP 125


>sp|COFE_METAC|COENZYME F420:L-glutamate ligase|Methanosarcina acetivorans (strain ATCC

Query: 1 YPPSNP 6
YPP NP
Sbjct: 120 YPPKNP 125


>sp|Y2133_ARCFU|UNCHARACTERIZED protein AF_2133|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YPPSNPYWTM 10
+PPSNP + +
Sbjct: 112 FPPSNPQFLL 121


>sp|TKTN_METJA|PUTATIVE transketolase N-terminal section|Methanocaldococcus jannaschii

Query: 1 YPPSNPY 7
Y P NPY
Sbjct: 53 YSPDNPY 59


>sp|GGGPS_METTH|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 4 SNPYWTM 10
+NPYW +
Sbjct: 99 TNPYWII 105


>sp|PIMT_IGNH4|PROTEIN-L-ISOASPARTATE O-methyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YPPSNPY 7
YPP+ PY
Sbjct: 139 YPPAAPY 145


>sp|GGGPS_METST|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 SNPYW 8
+NPYW
Sbjct: 99 TNPYW 103


>sp|PIMT_METMJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 YPPSNPY 7
YPP PY
Sbjct: 141 YPPEAPY 147


>sp|PIMT_METKA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 YPPSNPY 7
YPP PY
Sbjct: 147 YPPEAPY 153


>sp|GGGPS_KORCO|GERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 SNPYWTM 10
+NPYW +
Sbjct: 97 TNPYWII 103


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 SNPYWTM 10
S P+WT+
Sbjct: 28 STPFWTL 34


>sp|PIMT_THESM|PROTEIN-L-ISOASPARTATE O-methyltransferase|Thermococcus sibiricus (strain DSM 12597

Query: 1 YPPSNPY 7
YPP+ PY
Sbjct: 143 YPPNAPY 149


>sp|GGGPS_METTM|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 4 SNPYWTM 10
+NPYW +
Sbjct: 99 NNPYWII 105


>sp|RS13_METLZ|SMALL ribosomal subunit protein uS13|Methanocorpusculum labreanum

Query: 1 YPPSNPYWTM 10
YP S P W +
Sbjct: 72 YPASVPKWMV 81


>sp|TRUB_PYRAR|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum arsenaticum (strain DSM

Query: 3 PSNPYW 8
P+NP W
Sbjct: 15 PTNPEW 20


>sp|GGGPS_METS3|GERANYLGERANYLGLYCERYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 SNPYW 8
+NPYW
Sbjct: 100 TNPYW 104


>sp|SURE_METTH|5'-NUCLEOTIDASE SurE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PPSNPY 7
PPS PY
Sbjct: 237 PPSPPY 242


>sp|MFNA_META3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus aeolicus (strain

Query: 2 PPSNPYWTM 10
PP Y+TM
Sbjct: 136 PPLTKYYTM 144


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YPPSNPYWTM 10
Y P + YW +
Sbjct: 748 YSPKSGYWQL 757


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PSNPYWT 9
PSNPY+T
Sbjct: 57 PSNPYYT 63


>sp|PYRH_AERPE|URIDYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YPPSNPY 7
YP S PY
Sbjct: 85 YPRSQPY 91


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 1 YPPSNPYWTM 10
Y PSN W +
Sbjct: 515 YNPSNDSWEL 524


>sp|MOAA_PYRHO|PROBABLE GTP 3',8-cyclase|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 PYWT 9
PYWT
Sbjct: 303 PYWT 306


>sp|DCD_PYRHO|DCTP deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PPSNPY 7
PP NPY
Sbjct: 133 PPRNPY 138


>sp|PIMT_PYRHO|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YPPSNPY 7
+PP +PY
Sbjct: 143 FPPKSPY 149


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 YPPSNPYWTM 10
Y P + YW +
Sbjct: 873 YEPPSKYWAV 882


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 YPPSNPYWTM 10
Y P + YW +
Sbjct: 873 YEPPSKYWAV 882


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 YPPSNPYWTM 10
Y P + YW +
Sbjct: 873 YEPPSKYWAV 882


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 YPPSNPYWTM 10
Y P + YW +
Sbjct: 873 YEPPSKYWAV 882


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 YPPSNPYWTM 10
Y P + YW +
Sbjct: 873 YEPPSKYWAV 882


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 YPPSNPYWTM 10
Y P + YW +
Sbjct: 873 YEPPSKYWAV 882


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 YPPSNPYWTM 10
Y P + YW +
Sbjct: 873 YEPPSKYWAV 882


>sp|RS4_IGNH4|SMALL ribosomal subunit protein uS4|Ignicoccus hospitalis (strain KIN4/I

Query: 1 YPPSNPYW 8
Y P++PY+
Sbjct: 154 YAPTSPYF 161


>sp|KAE1_NANEQ|TRNA N6-adenosine threonylcarbamoyltransferase|Nanoarchaeum equitans

Query: 2 PPSNPYW 8
P PYW
Sbjct: 304 PKPRPYW 310


>sp|ARCH_METMA|PROTEIN archease|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YPPSNPYWT 9
YP S+P+ T
Sbjct: 111 YPESHPFET 119


>sp|ARCH_METAC|PROTEIN archease|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YPPSNPYWT 9
YP S+P+ T
Sbjct: 111 YPESHPFET 119




253|Sequence|1261|1270|PYWTMQALLG

>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PYWTMQALL 9
PYW ++ALL
Sbjct: 222 PYWVIEALL 230


>sp|AROB_PYRFU|3-DEHYDROQUINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PYWTMQAL 8
PY T+QA+
Sbjct: 286 PYTTLQAM 293




254|Sequence|1266|1275|QALLGDPVFY

>sp|AROC_METTH|CHORISMATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 LGDPVF 9
LGDPVF
Sbjct: 228 LGDPVF 233


>sp|AROC_METKA|CHORISMATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 4 LGDPVF 9
LGDPVF
Sbjct: 227 LGDPVF 232


>sp|AROE_METBU|SHIKIMATE dehydrogenase (NADP(+))|Methanococcoides burtonii (strain DSM

Query: 2 ALLGDPV 8
A+LGDP+
Sbjct: 6 AVLGDPI 12


>sp|TRM1_METKA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanopyrus kandleri

Query: 6 DPVFY 10
DPVFY
Sbjct: 26 DPVFY 30


>sp|TIAS_CENSY|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Cenarchaeum symbiosum (strain

Query: 6 DPVFY 10
DPVFY
Sbjct: 217 DPVFY 221


>sp|AROE_METTP|SHIKIMATE dehydrogenase (NADP(+))|Methanothrix thermoacetophila (strain DSM

Query: 2 ALLGDPV 8
A+LGDP+
Sbjct: 5 AVLGDPI 11


>sp|AAT_SACS2|ASPARTATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QALLGDPVFY 10
+ +L DP FY
Sbjct: 121 EVILPDPSFY 130


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 QALLGDPVFY 10
+ ++GD V+Y
Sbjct: 535 EKIIGDKVYY 544


>sp|HTPX_METTH|PROTEASE HtpX homolog|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 LGDPVFY 10
LG P+FY
Sbjct: 43 LGGPLFY 49




255|Sequence|1271|1280|DPVFYLTCLM

>sp|DPHB_METMA|DIPHTHINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 FYLTCLM 10
FY +CLM
Sbjct: 33 FYTSCLM 39


>sp|DPHB_METBF|DIPHTHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 FYLTCLM 10
FY +CLM
Sbjct: 33 FYTSCLM 39


>sp|DPHB_METAC|DIPHTHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 FYLTCLM 10
FY +CLM
Sbjct: 33 FYTSCLM 39


>sp|Y3543_METJA|UNCHARACTERIZED protein MJECL43|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DPVFYLTCLM 10
D FYL C++
Sbjct: 293 DKNFYLDCVL 302


>sp|Y1809_ARCFU|UNCHARACTERIZED protein AF_1809|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DPVFYLTC 8
PV +LTC
Sbjct: 24 QPVMFLTC 31




256|Sequence|1276|1285|LTCLMTPVAA

>sp|SYY_METKA|TYROSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 TCLMTPV 8
TCL TP+
Sbjct: 200 TCLHTPI 206




257|Sequence|1281|1290|TPVAALLPRL

>sp|GGR_METAR|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 PVAALLPRL 10
PV+ +LP+L
Sbjct: 261 PVSGMLPKL 269


>sp|DNLI_METMJ|DNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 VAALLPRL 10
VAA+LPRL
Sbjct: 26 VAAVLPRL 33


>sp|ARGC_METMJ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 TPVAALLPRL 10
TPVA++ P L
Sbjct: 39 TPVASVHPHL 48




258|Sequence|1286|1295|LLPRLFFRSL

>sp|COBQ_THEAC|PROBABLE cobyric acid synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LPRLFFRS 9
L R+FFRS
Sbjct: 20 LSRIFFRS 27


>sp|YC8B_METJA|UNCHARACTERIZED protein MJ1282.2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PRLFFRSL 10
PR+F+ SL
Sbjct: 160 PRMFYSSL 167


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PRLFFRSL 10
P +FFRS+
Sbjct: 113 PGIFFRSM 120


>sp|Y1533_ARCFU|UNCHARACTERIZED transporter AF_1533|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RLFFRSL 10
RLFFRS+
Sbjct: 201 RLFFRSV 207




259|Sequence|1291|1300|FFRSLQGRVF

>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 FRSLQGRV 9
FRSL GRV
Sbjct: 917 FRSLAGRV 924


>sp|HIS3_METTP|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FFRSLQGRV 9
F+R+L GR+
Sbjct: 99 FYRTLDGRI 107


>sp|ASSY_ARCFU|ARGININOSUCCINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FRSLQGRVF 10
F LQGR+F
Sbjct: 377 FHGLQGRLF 385


>sp|LIVG_ARCFU|PROBABLE branched-chain amino acid transport|Archaeoglobus fulgidus

Query: 1 FFRSLQGRVF 10
F+R+ +G+VF
Sbjct: 52 FYRADEGKVF 61


>sp|Y365_METJA|UNCHARACTERIZED protein MJ0365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FRSLQGRV 9
FR QGRV
Sbjct: 84 FRKYQGRV 91


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 3 RSLQGRVF 10
+ LQGRVF
Sbjct: 332 KMLQGRVF 339


>sp|DNLI_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 RSLQGRVF 10
R +QGRVF
Sbjct: 42 RFVQGRVF 49


>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 3 RSLQGRVF 10
R +QGRVF
Sbjct: 42 RFVQGRVF 49


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 RSLQGRVF 10
R +QGRVF
Sbjct: 42 RFVQGRVF 49


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 RSLQGRVF 10
R +QGRVF
Sbjct: 42 RFVQGRVF 49


>sp|DNLI_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 RSLQGRVF 10
R +QGRVF
Sbjct: 42 RFVQGRVF 49


>sp|Y388_METJA|UNCHARACTERIZED protein MJ0388|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FFRSLQGRV 9
FFR +GR+
Sbjct: 172 FFREEEGRI 180


>sp|HIS3_METBF|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FFRSLQGRV 9
F+R+L+G V
Sbjct: 107 FYRNLEGEV 115


>sp|HIS3_METAC|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FFRSLQGRV 9
F+R+L+G V
Sbjct: 100 FYRNLKGEV 108


>sp|SYW_THEAC|TRYPTOPHAN--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FFRSLQGRV 9
FF+ L GRV
Sbjct: 83 FFQKLGGRV 91


>sp|DNLI_METPE|DNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 FFRSLQGRVF 10
F R L G++F
Sbjct: 41 FIRFLMGKIF 50




260|Sequence|1296|1305|QGRVFPTQLQ

>sp|DNLI_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QGRVFPTQ 8
QGRVFP
Sbjct: 45 QGRVFPAH 52


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 QGRVFPTQ 8
QGRVFP
Sbjct: 45 QGRVFPAH 52


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 QGRVFPTQ 8
QGRVFP
Sbjct: 45 QGRVFPAH 52


>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 QGRVFP 6
QGRVFP
Sbjct: 45 QGRVFP 50


>sp|DNLI_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QGRVFP 6
QGRVFP
Sbjct: 45 QGRVFP 50


>sp|RFRNP_HALVD|RNA-FREE ribonuclease P|Haloferax volcanii (strain ATCC 29605

Query: 1 QGRVFPTQLQ 10
+GR FPT L+
Sbjct: 199 RGRAFPTLLE 208


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GRVFPTQLQ 10
GR+FP Q++
Sbjct: 22 GRLFPPQVE 30


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 3 RVFPTQL 9
R+FP QL
Sbjct: 86 RIFPNQL 92


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QGRVFPTQL 9
+GR++P +L
Sbjct: 46 EGRIYPPEL 54


>sp|NNR_METHJ|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanospirillum hungatei JF-1

Query: 1 QGRVFPTQL 9
QGR FP L
Sbjct: 6 QGRSFPDDL 14


>sp|RL3_NANEQ|LARGE ribosomal subunit protein uL3|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 GRVFPT 7
GR+FPT
Sbjct: 232 GRIFPT 237




261|Sequence|1301|1310|PTQLQLARQL

>sp|RL15E_HALSA|LARGE ribosomal subunit protein eL15|Halobacterium salinarum (strain

Query: 1 PTQLQLARQL 10
PT+L AR+L
Sbjct: 44 PTRLDKAREL 53


>sp|RL15E_HALS3|LARGE ribosomal subunit protein eL15|Halobacterium salinarum (strain

Query: 1 PTQLQLARQL 10
PT+L AR+L
Sbjct: 44 PTRLDKAREL 53




262|Sequence|1306|1315|LARQLTRKSP

>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LARQLTRKSP 10
+AR++ RK P
Sbjct: 81 IARRIQRKDP 90


>sp|SYS_HALWD|SERINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 RQLTRKSP 10
RQL RK+P
Sbjct: 4 RQLLRKNP 11




263|Sequence|1311|1320|TRKSPRRCSA

>sp|GLK_PYRCJ|GLUCOKINASE calidifontis (strain DSM 21063

Query: 3 KSPRRC 8
KSPRRC
Sbjct: 153 KSPRRC 158


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KSPRRCS 9
K PR+CS
Sbjct: 434 KPPRKCS 440


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 5 PRRCS 9
PRRCS
Sbjct: 152 PRRCS 156




264|Sequence|1316|1325|RRCSAPKETF

>sp|DPCKG_METST|GTP-DEPENDENT dephospho-CoA kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 SAPKETF 10
+APK+TF
Sbjct: 131 NAPKDTF 137


>sp|DTDA_IGNH4|D-AMINOACYL-TRNA deacylase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RRCSAPKETF 10
RC APK +
Sbjct: 155 HRCEAPKAVW 164




265|Sequence|1321|1330|PKETFAQGRL

>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 PKETFAQGRL 10
P E+F QGR+
Sbjct: 204 PLESFPQGRV 213


>sp|Y429_METAC|PUTATIVE nickel insertion protein|Methanosarcina acetivorans (strain ATCC

Query: 1 PKETFAQGR 9
P ETF QG+
Sbjct: 204 PVETFPQGK 212


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 KETFAQGRL 10
+E+F QGRL
Sbjct: 26 EESFKQGRL 34


>sp|RL3_PYRNV|LARGE ribosomal subunit protein uL3|Pyrobaculum neutrophilum (strain DSM

Query: 1 PKETFAQGRL 10
PKE F G+L
Sbjct: 191 PKEVFTAGQL 200


>sp|RL3_PYRIL|LARGE ribosomal subunit protein uL3|Pyrobaculum islandicum (strain DSM

Query: 1 PKETFAQGRL 10
PKE F G+L
Sbjct: 195 PKEVFTAGQL 204


>sp|ADEC_METB6|ADENINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 2 KETFAQGR 9
KET+++GR
Sbjct: 338 KETYSRGR 345


>sp|RL3_PYRAR|LARGE ribosomal subunit protein uL3|Pyrobaculum arsenaticum (strain DSM

Query: 1 PKETFAQGRL 10
PK+ F+ G+L
Sbjct: 191 PKDVFSPGQL 200




266|Sequence|1326|1335|AQGRLPKDSG

>sp|QUEC_METKA|7-CYANO-7-DEAZAGUANINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 GRLPKDSG 10
GRLP+++G
Sbjct: 79 GRLPREAG 86


>sp|SPT5_SACS2|TRANSCRIPTION elongation factor Spt5|Saccharolobus solfataricus (strain ATCC

Query: 1 AQGRLPKD 8
AQG LP+D
Sbjct: 75 AQGLLPRD 82


>sp|SPT5_ACIAM|TRANSCRIPTION elongation factor Spt5|Acidianus ambivalens (Desulfurolobus

Query: 1 AQGRLPKD 8
AQG +PKD
Sbjct: 74 AQGLVPKD 81


>sp|ARLY_METST|ARGININOSUCCINATE lyase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 QGRLPKDSG 10
+G +PK+SG
Sbjct: 47 EGIIPKESG 55


>sp|GATC_SACI7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 2 QGRLPKDS 9
QGRL KD+
Sbjct: 60 QGRLRKDT 67


>sp|GATC_SACI6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 2 QGRLPKDS 9
QGRL KD+
Sbjct: 60 QGRLRKDT 67


>sp|GATC_SACI4|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 2 QGRLPKDS 9
QGRL KD+
Sbjct: 60 QGRLRKDT 67


>sp|GATC_SACI3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 2 QGRLPKDS 9
QGRL KD+
Sbjct: 60 QGRLRKDT 67


>sp|GATC_SACI2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 2 QGRLPKDS 9
QGRL KD+
Sbjct: 60 QGRLRKDT 67


>sp|GATC_SACI1|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 2 QGRLPKDS 9
QGRL KD+
Sbjct: 60 QGRLRKDT 67


>sp|AROD_PYRAE|3-DEHYDROQUINATE dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 QGRLPKDSG 10
GRL KD+G
Sbjct: 256 MGRLKKDAG 264


>sp|SRP54_METTH|SIGNAL recognition particle 54 kDa|Methanothermobacter thermautotrophicus

Query: 3 GRLPKDS 9
G+LPKD+
Sbjct: 353 GKLPKDA 359


>sp|RS15_CENSY|SMALL ribosomal subunit protein uS15|Cenarchaeum symbiosum (strain A)

Query: 3 GRLPKD 8
GR+PKD
Sbjct: 132 GRIPKD 137


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 3 GRLPKDS 9
GRLP DS
Sbjct: 534 GRLPLDS 540


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 AQGRLPKDS 9
AQG +P DS
Sbjct: 300 AQGFIPTDS 308




267|Sequence|1331|1340|PKDSGTEHSS

***** No hits found ******


268|Sequence|1336|1345|TEHSSGRTVK

>sp|PELO_METVS|PROTEIN pelota homolog|Methanococcus vannielii (strain ATCC 35089

Query: 1 TEHSSGRTVK 10
TEH SGR +K
Sbjct: 325 TEHDSGRQLK 334


>sp|NNR_PYRAE|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Pyrobaculum aerophilum (strain

Query: 3 HSSGRTVK 10
H++GRTV+
Sbjct: 69 HAAGRTVR 76




269|Sequence|1341|1350|GRTVKTSVPL

>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 1 GRTVKTSVP 9
GRTVK VP
Sbjct: 285 GRTVKKEVP 293


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RTVKTSVP 9
RT+ TS+P
Sbjct: 1121 RTLNTSIP 1128


>sp|PFDA_METBF|PREFOLDIN subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 1 GRTVKTSVPL 10
G+T +T VP+
Sbjct: 57 GKTAETMVPV 66


>sp|FPON_METMA|F(420)H(2) dehydrogenase subunit N|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GRTVKTSVPL 10
G+T K S+P
Sbjct: 447 GKTEKVSIPF 456


>sp|RS4E_THEKO|SMALL ribosomal subunit protein eS4|Thermococcus kodakarensis (strain

Query: 3 TVKTSVPL 10
++KTS+PL
Sbjct: 38 SMKTSIPL 45


>sp|RS4E_PYRAR|SMALL ribosomal subunit protein eS4|Pyrobaculum arsenaticum (strain DSM

Query: 2 RTVKTSVPL 10
+T+KT +P+
Sbjct: 166 KTIKTHIPM 174




270|Sequence|1346|1355|TSVPLSQPSW

>sp|DPHB_METPE|DIPHTHINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 SVPLSQPSW 10
SVP Q +W
Sbjct: 134 SVPFPQKNW 142


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 5 LSQPSW 10
+SQP+W
Sbjct: 681 ISQPNW 686


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 5 LSQPSW 10
+SQP+W
Sbjct: 681 ISQPNW 686


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 5 LSQPSW 10
+SQP+W
Sbjct: 681 ISQPNW 686


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 5 LSQPSW 10
+SQP+W
Sbjct: 681 ISQPNW 686


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 5 LSQPSW 10
+SQP+W
Sbjct: 681 ISQPNW 686


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 5 LSQPSW 10
+SQP+W
Sbjct: 681 ISQPNW 686


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 5 LSQPSW 10
+SQPSW
Sbjct: 508 ISQPSW 513




271|Sequence|1351|1360|SQPSWHTQQP

>sp|RL21_NANEQ|LARGE ribosomal subunit protein eL21|Nanoarchaeum equitans (strain

Query: 2 QPSWHTQQP 10
+PSWH P
Sbjct: 47 EPSWHYGMP 55


>sp|Y500_AERPE|UPF0282 protein APE_0500.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 SQPSWHTQQ 9
S+P WH ++
Sbjct: 143 SKPVWHGEE 151


>sp|ENGB_METJA|PROBABLE GTP-binding protein EngB|Methanocaldococcus jannaschii (strain ATCC

Query: 2 QPSWH 6
QP WH
Sbjct: 178 QPPWH 182


>sp|SYH_HALSA|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SQPSWHTQQP 10
S+P W ++P
Sbjct: 102 SRPFWRYEEP 111


>sp|SYH_HALS3|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 SQPSWHTQQP 10
S+P W ++P
Sbjct: 102 SRPFWRYEEP 111


>sp|RS15_NITMS|SMALL ribosomal subunit protein uS15|Nitrosopumilus maritimus (strain

Query: 3 PSWHTQQP 10
PSW TQ P
Sbjct: 23 PSWITQSP 30


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SQPSW 5
SQPSW
Sbjct: 509 SQPSW 513




272|Sequence|1356|1365|HTQQPVCSLE

>sp|Y1575_ARCFU|UNCHARACTERIZED protein AF_1575|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HTQQPVCSL 9
HT PVC +
Sbjct: 177 HTDWPVCEI 185


>sp|Y1521_ARCFU|ADP-RIBOSE glycohydrolase AF_1521|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HTQQPVCS 8
HT P+CS
Sbjct: 98 HTVGPICS 105


>sp|KAE1B_HALSA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 QQPVC 7
QQPVC
Sbjct: 122 QQPVC 126


>sp|EF1A_HALSA|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 700922

Query: 1 HTQQPVCSLE 10
HT Q C++E
Sbjct: 341 HTAQVACTIE 350


>sp|EF1A_HALS3|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 29341

Query: 1 HTQQPVCSLE 10
HT Q C++E
Sbjct: 341 HTAQVACTIE 350


>sp|EF1A_HALWD|ELONGATION factor 1-alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HTQQPVCSLE 10
HT Q C++E
Sbjct: 341 HTAQVACTIE 350


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HTQQPVCSLE 10
HT Q C++E
Sbjct: 342 HTAQVACTIE 351


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 1 HTQQPVCSL 9
HT Q C+L
Sbjct: 341 HTAQTACTL 349


>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 HTQQPVCSLE 10
HT Q C++E
Sbjct: 341 HTAQVACTVE 350




273|Sequence|1361|1370|VCSLEASGEP

>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 CSLEASGE 9
C LEASGE
Sbjct: 48 CFLEASGE 55


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 CSLEASGE 9
C L+ASGE
Sbjct: 45 CFLKASGE 52


>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CSLEASGE 9
C LE SGE
Sbjct: 51 CFLETSGE 58


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 2 CSLEASG 8
C LEASG
Sbjct: 45 CLLEASG 51


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 2 CSLEASGE 9
C LE SGE
Sbjct: 51 CFLECSGE 58


>sp|Y887_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 4 LEASGEP 10
LEASG P
Sbjct: 260 LEASGSP 266


>sp|ARCH_AERPE|PROTEIN archease|Aeropyrum pernix (strain ATCC 700893

Query: 1 VCSLEASGE 9
VC +E +GE
Sbjct: 87 VCKIECNGE 95


>sp|COBQ_METAR|PROBABLE cobyric acid synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VCSLEASGEP 10
+CSL + G P
Sbjct: 314 ICSLASDGVP 323




274|Sequence|1366|1375|ASGEPSTVDM

>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 1 ASGEPSTVDM 10
++GEP TVD+
Sbjct: 74 STGEPLTVDL 83


>sp|AATA_HALSA|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC

Query: 2 SGEPSTVDM 10
+GEP TVD+
Sbjct: 73 TGEPLTVDL 81


>sp|AATA_HALS3|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 29341

Query: 2 SGEPSTVDM 10
+GEP TVD+
Sbjct: 73 TGEPLTVDL 81


>sp|RIBL_THEKO|FAD synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GEPSTVDM 10
G P T+DM
Sbjct: 78 GTPGTIDM 85


>sp|Y2678_METMA|UNCHARACTERIZED serpin-like protein MM_2675|Methanosarcina mazei (strain ATCC

Query: 1 ASGEPSTVDM 10
A+GE ++VDM
Sbjct: 236 ANGEEASVDM 245


>sp|Y907_METJA|UNCHARACTERIZED protein MJ0907|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SGEPSTVD 9
+G+PST+D
Sbjct: 128 NGKPSTLD 135


>sp|TDXH2_THEAC|PEROXIREDOXIN 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GEPSTVD 9
G PSTVD
Sbjct: 173 GAPSTVD 179


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 2 SGEPSTVDM 10
SGEP VD+
Sbjct: 233 SGEPLAVDL 241


>sp|RRP4_PICTO|EXOSOME complex component Rrp4|Picrophilus torridus (strain ATCC 700027

Query: 3 GEPSTVDM 10
GEP VD+
Sbjct: 183 GEPENVDL 190


>sp|MVK_AERPE|MEVALONATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ASGEPSTVDM 10
A G+PS VD+
Sbjct: 146 AHGKPSGVDV 155


>sp|NUCS1_HALSA|ENDONUCLEASE NucS 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 ASGEPSTVD 9
ASG P TVD
Sbjct: 74 ASGGPVTVD 82


>sp|PUR2_METJA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GEPSTVD 9
GEP TVD
Sbjct: 356 GEPITVD 362


>sp|FTHS_HALWD|FORMATE--TETRAHYDROFOLATE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 GEPSTVD 9
GEP TVD
Sbjct: 248 GEPITVD 254


>sp|RTCA_METKA|RNA 3'-terminal phosphate cyclase|Methanopyrus kandleri (strain AV19 /

Query: 3 GEPSTVDM 10
GEP+TV++
Sbjct: 341 GEPATVEV 348


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SGEPSTVDM 10
+GEP +VD+
Sbjct: 75 TGEPLSVDL 83


>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 2 SGEPSTVDM 10
+GEP +VD+
Sbjct: 74 TGEPLSVDL 82


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 1 ASGEPSTVDM 10
A G P+ +DM
Sbjct: 978 AEGSPNVLDM 987




275|Sequence|1371|1380|STVDMSMPVR

***** No hits found ******


276|Sequence|1376|1385|SMPVREHTLL

>sp|Y733_METJA|UNCHARACTERIZED protein MJ0733|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SMPVREHTLL 10
+MPV HTLL
Sbjct: 22 NMPVMMHTLL 31


>sp|GCST_AERPE|PROBABLE aminomethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 MPVREHTL 9
MPVR H L
Sbjct: 1 MPVRRHIL 8


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 2 MPVREHTL 9
MPV EH L
Sbjct: 275 MPVMEHPL 282


>sp|Y841_METTH|UNCHARACTERIZED transporter MTH_841|Methanothermobacter thermautotrophicus (strain

Query: 3 PVREHTL 9
P+REH L
Sbjct: 95 PLREHVL 101


>sp|RS5_METTP|SMALL ribosomal subunit protein uS5|Methanothrix thermoacetophila

Query: 2 MPVREHTLL 10
+P++EH ++
Sbjct: 36 LPIKEHQII 44


>sp|SPSS1_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanococcoides burtonii (strain DSM 6242

Query: 3 PVREHTLL 10
PV EH +L
Sbjct: 195 PVNEHNIL 202




277|Sequence|1381|1390|EHTLLEGLSA

>sp|AMPD_METSM|ANHYDROMEVALONATE phosphate decarboxylase|Methanobrevibacter smithii

Query: 1 EHTLLEGL 8
EH LL+GL
Sbjct: 276 EHKLLQGL 283


>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC

Query: 1 EHTLLEGLSA 10
EH L+ GL+A
Sbjct: 50 EHALVAGLTA 59


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 EHTLLEGLSA 10
EH L+ GL+A
Sbjct: 50 EHALVAGLTA 59


>sp|GGR_META3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EHTLLEG 7
EH LLEG
Sbjct: 239 EHPLLEG 245


>sp|PHNC2_HALWD|PHOSPHONATES import ATP-binding protein PhnC|Haloquadratum walsbyi (strain DSM

Query: 1 EHTLLEGLSA 10
+H L++G+SA
Sbjct: 79 QHNLVDGVSA 88


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 1 EHTLLEGL 8
EH LL+GL
Sbjct: 281 EHRLLQGL 288


>sp|PYRB_HALLT|ASPARTATE carbamoyltransferase catalytic subunit|Halorubrum lacusprofundi

Query: 1 EHTLLEGL 8
EHT LEG+
Sbjct: 206 EHTDLEGV 213




278|Sequence|1386|1395|EGLSAPAPMS

>sp|CAS1C_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GLSAPAP 8
G+SAPAP
Sbjct: 278 GISAPAP 284


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EGLSAPAP 8
EG+S P P
Sbjct: 1958 EGVSVPVP 1965




279|Sequence|1391|1400|PAPMSSAPGE

>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 1 PAPMSSAPG 9
P P + APG
Sbjct: 12 PGPPTEAPG 20


>sp|Y436_PYRFU|KELCH domain-containing protein PF0436|Pyrococcus furiosus (strain ATCC

Query: 1 PAPMSSAPG 9
P P+ APG
Sbjct: 288 PYPLGQAPG 296




280|Sequence|1396|1405|SAPGEAVLRS

>sp|TSGDD_HALVD|GLUCOSE import ATP-binding protein TsgD13|Haloferax volcanii (strain ATCC

Query: 2 APGEAVLRS 10
APGE VLR+
Sbjct: 281 APGEPVLRA 289


>sp|LEUC2_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 1 SAPGEAVLR 9
+ PGEAV+R
Sbjct: 10 AKPGEAVIR 18


>sp|SYE_NITMS|GLUTAMATE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 PGEAVLR 9
PGEA++R
Sbjct: 235 PGEAIVR 241


>sp|TRPD_METAC|ANTHRANILATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 SAPGEAVLRS 10
S PGEA L S
Sbjct: 347 SCPGEAFLAS 356


>sp|PGK_HALSA|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 APGEAVL 8
APGEAV+
Sbjct: 106 APGEAVV 112


>sp|PGK_HALS3|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 APGEAVL 8
APGEAV+
Sbjct: 106 APGEAVV 112


>sp|PGK_AERPE|PHOSPHOGLYCERATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PGEAVL 8
PGEAVL
Sbjct: 114 PGEAVL 119




281|Sequence|1401|1410|AVLRSPGGCP

>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 1 AVLRSPGGCP 10
AV+ SP CP
Sbjct: 82 AVMTSPAKCP 91


>sp|TTDB_METJA|PUTATIVE L(+)-tartrate dehydratase subunit beta|Methanocaldococcus

Query: 3 LRSPGGC 9
L +PGGC
Sbjct: 123 LAAPGGC 129


>sp|CS1F2_THETK|CRISPR-ASSOCIATED endonuclease Cas1/endonuclease Cas2 fusion|Thermoproteus tenax

Query: 4 RSPGGCP 10
RSPGG P
Sbjct: 147 RSPGGAP 153


>sp|CFBD_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 1 AVLRSPGGC 9
A+L P GC
Sbjct: 31 AILHGPPGC 39


>sp|AGL13_HALVD|PROBABLE low-salt glycan biosynthesis epimerase|Haloferax volcanii (strain

Query: 2 VLRSPGGC 9
V+R PG C
Sbjct: 100 VIRIPGDC 107


>sp|SUA5_PYRAB|THREONYLCARBAMOYL-AMP synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 VLRSPGGCP 10
VL PGG P
Sbjct: 192 VLLRPGGLP 200


>sp|Y3242_HALS3|UPF0284 protein OE_3242F|Halobacterium salinarum (strain ATCC 29341

Query: 5 SPGGCP 10
SP GCP
Sbjct: 59 SPSGCP 64


>sp|Y1572_HALSA|UPF0284 protein VNG_1572C|Halobacterium salinarum (strain ATCC 700922

Query: 5 SPGGCP 10
SP GCP
Sbjct: 59 SPSGCP 64




282|Sequence|1406|1415|PGGCPEESKV

>sp|CS3HD_THETK|CRISPR-ASSOCIATED endonuclease Cas3-HD|Thermoproteus tenax (strain ATCC 35583

Query: 2 GGCPEESKV 10
GG PEE++V
Sbjct: 177 GGAPEEARV 185


>sp|Y841_METTH|UNCHARACTERIZED transporter MTH_841|Methanothermobacter thermautotrophicus

Query: 3 GCPEE 7
GCPEE
Sbjct: 33 GCPEE 37


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 PGGCPEES 8
P CPEES
Sbjct: 306 PALCPEES 313


>sp|Y872_METJA|UNCHARACTERIZED lipoprotein MJ0872|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GGCPEESK 9
GC EESK
Sbjct: 19 AGCVEESK 26


>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGGCPEESK 9
PGG P E +
Sbjct: 19 PGGFPREPR 27


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 PGGCPEESK 9
PG PEE K
Sbjct: 1087 PGAKPEEIK 1095


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 1 PGGCPEESK 9
P G PEE++
Sbjct: 397 PKGVPEETR 405


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 1 PGGCPEESK 9
P G PEE++
Sbjct: 397 PRGVPEETR 405


>sp|CYAS_METBU|CYSTEATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GGCPEE 7
G CPEE
Sbjct: 282 GNCPEE 287


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 1 PGGCPEESK 9
P G PEE++
Sbjct: 397 PRGVPEETR 405


>sp|MFNA_METMJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoculleus marisnigri

Query: 3 GCPEE 7
GCPEE
Sbjct: 5 GCPEE 9


>sp|MRE11_METKA|DNA double-strand break repair protein|Methanopyrus kandleri (strain

Query: 1 PGGCPEESKV 10
PG P+ES++
Sbjct: 172 PGTIPDESEI 181


>sp|DPOL_PYRGL|DNA polymerase|Pyrococcus glycovorans

Query: 1 PGGCPEESK 9
PG PEE K
Sbjct: 550 PGAKPEEIK 558


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GCPEESKV 10
GCP E ++
Sbjct: 92 GCPTEKEI 99




283|Sequence|1411|1420|EESKVRAAST

***** No hits found ******


284|Sequence|1416|1425|RAASTGRVTP

>sp|MEND_HALLT|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 RAASTGRVTP 10
RA TG+VTP
Sbjct: 65 RARRTGKVTP 74


>sp|TRPB_HALSA|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 700922

Query: 4 STGRVTP 10
TGR+TP
Sbjct: 346 DTGRITP 352


>sp|TRPB_HALS3|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 29341

Query: 4 STGRVTP 10
TGR+TP
Sbjct: 346 DTGRITP 352


>sp|THPR_AERPE|RNA 2',3'-cyclic phosphodiesterase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RAASTGRV 8
+AAS+GRV
Sbjct: 169 KAASSGRV 176




285|Sequence|1421|1430|GRVTPLSSLF

>sp|SRP19_METAR|SIGNAL recognition particle 19 kDa|Methanocella arvoryzae (strain DSM

Query: 1 GRVTPLS 7
GR+TP+S
Sbjct: 23 GRLTPMS 29


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 2 RVTPLSSL 9
RVTPLS +
Sbjct: 132 RVTPLSQV 139


>sp|Y841_METTH|UNCHARACTERIZED transporter MTH_841|Methanothermobacter thermautotrophicus (strain

Query: 1 GRVTPLSSLF 10
G + PLSSLF
Sbjct: 298 GALFPLSSLF 307


>sp|DNLJ_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 GRVTPLSSL 9
GR+TP++ L
Sbjct: 374 GRLTPVAEL 382


>sp|AIPS_AERPE|ARCHAETIDYLINOSITOL phosphate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GRVTPLSSLF 10
GRV+PL S
Sbjct: 78 GRVSPLGSFL 87


>sp|COXX_CALMQ|PROTOHEME IX farnesyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 GRVTPLSSL 9
G+VTPL++L
Sbjct: 78 GKVTPLNAL 86


>sp|CBIA_HALMA|COBYRINATE a,c-diamide synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GRVTPLSSL 9
GR+ P+S L
Sbjct: 170 GRIPPMSDL 178


>sp|THPS_SULAC|THERMOPSIN acidocaldarius (strain ATCC 33909

Query: 1 GRVTPLSSLF 10
G +TP+ SL+
Sbjct: 288 GSITPVPSLY 297


>sp|MOBA_NATPD|PROBABLE molybdenum cofactor guanylyltransferase|Natronomonas pharaonis

Query: 3 VTPLSSL 9
+TPLSSL
Sbjct: 160 ITPLSSL 166




286|Sequence|1426|1435|LSSLFSLPTF

>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 2 SSLFSLPT 9
S +FSLPT
Sbjct: 449 SGVFSLPT 456




287|Sequence|1431|1440|SLPTFSLLNW

>sp|GATA_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus vannielii (strain ATCC

Query: 1 SLPTFSLLNW 10
+LPT+ L+N+
Sbjct: 275 ALPTYYLINY 284


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 1 SLPTFSLLNW 10
+LPT+ L+N+
Sbjct: 275 ALPTYYLINY 284


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 SLPTFSLLNW 10
+LPT+ L+N+
Sbjct: 275 ALPTYYLINY 284


>sp|GATA_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 SLPTFSLLNW 10
+LPT+ L+N+
Sbjct: 275 ALPTYYLINY 284


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 SLPTFSLLNW 10
+LPT+ L+N+
Sbjct: 275 ALPTYYLINY 284


>sp|GATA_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanocaldococcus jannaschii (strain

Query: 1 SLPTFSLLNW 10
+LPT+ L+N+
Sbjct: 277 ALPTYYLINY 286


>sp|YD5A_METJA|UNCHARACTERIZED protein MJ1351.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FSLLNW 10
F+LLNW
Sbjct: 188 FNLLNW 193


>sp|GATA_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanothermobacter thermautotrophicus

Query: 2 LPTFSLLNW 10
LPT+ L+N+
Sbjct: 300 LPTYYLINY 308


>sp|GATA_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 2 LPTFSLLNW 10
LPT+ L+N+
Sbjct: 301 LPTYYLINY 309


>sp|GATA_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 2 LPTFSLLNW 10
LPT+ L+N+
Sbjct: 301 LPTYYLINY 309


>sp|MPTA_AERPE|GTP cyclohydrolase MptA|Aeropyrum pernix (strain ATCC 700893

Query: 1 SLPTFSLL 8
S PTF+LL
Sbjct: 200 SAPTFTLL 207


>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 2 LPTFSLLNW 10
+P F + NW
Sbjct: 276 IPAFLIRNW 284


>sp|FLA1_THEVO|FLAGELLIN B1|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SLPTFSLLNW 10
S+PT ++ W
Sbjct: 83 SVPTHGVIEW 92




288|Sequence|1436|1445|SLLNWISSWS

>sp|CAS8_THETK|CRISPR system associated protein Cas8|Thermoproteus tenax (strain ATCC

Query: 3 LNWISSW 9
LNWI W
Sbjct: 55 LNWIDQW 61


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 SLLNWISSWS 10
S LN+ S+WS
Sbjct: 6725 SALNYTSTWS 6734


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 SLLNWISSW 9
+L+NWI S+
Sbjct: 25 ALINWIESF 33


>sp|IDI2_IGNH4|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 SLLNWISSW 9
++ +W+SSW
Sbjct: 239 TVADWMSSW 247


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LLNWISSW 9
L+ WI SW
Sbjct: 27 LVEWIESW 34


>sp|RS4E_CALMQ|SMALL ribosomal subunit protein eS4|Caldivirga maquilingensis (strain

Query: 1 SLLNWISSW 9
+L+NW+ S+
Sbjct: 192 TLINWVRSF 200


>sp|HEM1_METTP|GLUTAMYL-TRNA reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 SLLNWISS 8
+LL W+SS
Sbjct: 29 ALLKWVSS 36


>sp|CMR5_ARCFU|CRISPR system Cmr subunit Cmr5|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SLLNWISSWS 10
S+LNWI ++
Sbjct: 138 SILNWIKKFA 147


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 WISSW 9
WI SW
Sbjct: 31 WIESW 35


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 5 WISSW 9
WI SW
Sbjct: 31 WIESW 35


>sp|Y597_METJA|UNCHARACTERIZED protein MJ0597|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LNWISS 8
+NW+SS
Sbjct: 230 MNWVSS 235


>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 2 LLNWISSW 9
L WI SW
Sbjct: 27 LKKWIESW 34


>sp|SYP_THEPD|PROLINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 5 WISSW 9
WI SW
Sbjct: 124 WIQSW 128


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 LNWISSWS 10
+ WI SW+
Sbjct: 422 VQWIPSWA 429


>sp|FDHC_METTF|PROBABLE formate transporter|Methanothermobacter thermautotrophicus

Query: 4 NWISSW 9
NW++SW
Sbjct: 112 NWVTSW 117


>sp|RFCL_SACI1|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 LLNWISSW 9
L WI SW
Sbjct: 26 LQEWIESW 33




289|Sequence|1441|1450|ISSWSLVSRL

>sp|DNAG_PYRCJ|DNA primase DnaG|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 SSWSLVSRL 10
++WSL+ R+
Sbjct: 331 TNWSLIKRI 339


>sp|LYSK_AERPE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Aeropyrum pernix (strain

Query: 2 SSWSLVSR 9
+WSLVSR
Sbjct: 134 GAWSLVSR 141


>sp|Y531_METJA|UNIVERSAL stress protein MJ0531|Methanocaldococcus jannaschii (strain ATCC

Query: 3 SWSLVSRL 10
SW L+S L
Sbjct: 76 SWELISEL 83


>sp|YSO3_ACIAM|UNCHARACTERIZED protein in sor 5'region|Acidianus ambivalens (Desulfurolobus

Query: 1 ISSWSLV 7
I+SWSL+
Sbjct: 128 IASWSLI 134




290|Sequence|1446|1455|LVSRLGSVLQ

>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VSRLGSVL 9
V+RLGSVL
Sbjct: 850 VNRLGSVL 857


>sp|IF2P_IGNH4|PROBABLE translation initiation factor IF-2|Ignicoccus hospitalis (strain

Query: 3 SRLGSVLQ 10
SR+GS+LQ
Sbjct: 514 SRVGSILQ 521




291|Sequence|1451|1460|GSVLQFSRTE

>sp|COBD_META3|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus aeolicus (strain

Query: 2 SVLQFSRT 9
S+LQFS+T
Sbjct: 103 SLLQFSKT 110


>sp|PYRB_METS5|ASPARTATE carbamoyltransferase catalytic subunit|Metallosphaera sedula

Query: 2 SVLQFSRTE 10
SVL FSR E
Sbjct: 6 SVLDFSRDE 14




292|Sequence|1456|1465|FSRTEQLADG

>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSRTEQLADG 10
SR E+L+DG
Sbjct: 662 LSRVEELSDG 671


>sp|RS3_METVS|SMALL ribosomal subunit protein uS3|Methanococcus vannielii (strain ATCC

Query: 2 SRTEQLADG 10
SRTE+ DG
Sbjct: 140 SRTEKFMDG 148


>sp|RS3_METMP|SMALL ribosomal subunit protein uS3|Methanococcus maripaludis (strain DSM

Query: 2 SRTEQLADG 10
SRTE+ DG
Sbjct: 140 SRTEKFMDG 148


>sp|RS3_METM5|SMALL ribosomal subunit protein uS3|Methanococcus maripaludis (strain C5

Query: 2 SRTEQLADG 10
SRTE+ DG
Sbjct: 140 SRTEKFMDG 148


>sp|RS3_METM7|SMALL ribosomal subunit protein uS3|Methanococcus maripaludis (strain C7

Query: 2 SRTEQLADG 10
SRTE+ DG
Sbjct: 140 SRTEKFMDG 148


>sp|RS3_METM6|SMALL ribosomal subunit protein uS3|Methanococcus maripaludis (strain C6

Query: 2 SRTEQLADG 10
SRTE+ DG
Sbjct: 140 SRTEKFMDG 148


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FSRTEQLADG 10
RT++LADG
Sbjct: 380 LRRTKRLADG 389


>sp|HIS2_NATPD|PHOSPHORIBOSYL-ATP pyrophosphatase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SRTEQLADG 10
SR E+L DG
Sbjct: 21 SRKEELPDG 29


>sp|FOLD2_HALMA|BIFUNCTIONAL protein FolD 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 SRTEQLAD 9
SRT+ LAD
Sbjct: 193 SRTDDLAD 200


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 SRTEQLADG 10
+RTE++ DG
Sbjct: 710 NRTERIQDG 718




293|Sequence|1461|1470|QLADGQAGRG

>sp|SYW_THEKO|TRYPTOPHAN--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LADGQAGRG 10
LAD ++GRG
Sbjct: 64 LADYESGRG 72


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QLADGQA 7
Q+ADGQA
Sbjct: 33 QVADGQA 39




294|Sequence|1466|1475|QAGRGLPVQP

>sp|HIS6_METPE|IMIDAZOLE glycerol phosphate synthase subunit|Methanosphaerula palustris

Query: 2 AGRGLPVQ 9
AGRG+PV+
Sbjct: 260 AGRGVPVR 267


>sp|HIS6_METAR|IMIDAZOLE glycerol phosphate synthase subunit|Methanocella arvoryzae (strain

Query: 4 RGLPVQP 10
RG+PV+P
Sbjct: 267 RGIPVRP 273


>sp|Y4342_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 GRGLPVQP 10
RGLPV P
Sbjct: 245 ARGLPVNP 252


>sp|HIS6_METMJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanoculleus marisnigri

Query: 2 AGRGLPVQ 9
AGRG+PV+
Sbjct: 260 AGRGIPVR 267


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 4 RGLPVQ 9
RGLPVQ
Sbjct: 830 RGLPVQ 835


>sp|GYRB_HALVD|DNA gyrase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 3 GRGLPV 8
GRG+PV
Sbjct: 76 GRGIPV 81


>sp|GYRB_HALL2|DNA gyrase subunit B|Haloferax lucentense (strain DSM 14919

Query: 3 GRGLPV 8
GRG+PV
Sbjct: 76 GRGIPV 81


>sp|Y344_METJA|UNCHARACTERIZED protein MJ0344|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AGRGLPVQ 9
AG G+P+Q
Sbjct: 69 AGNGIPMQ 76


>sp|HIS6_IGNH4|IMIDAZOLE glycerol phosphate synthase subunit|Ignicoccus hospitalis (strain

Query: 4 RGLPVQP 10
RG+PV+P
Sbjct: 246 RGVPVRP 252


>sp|AATA_METS3|A-TYPE ATP synthase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 3 GRGLPVQ 9
GRG+P+Q
Sbjct: 538 GRGVPIQ 544


>sp|FILR1_METH6|METHANOGENESIS regulatory protein FilR1|Methanothrix harundinacea (strain 6Ac)

Query: 1 QAGRGLPVQ 9
Q G+GLP++
Sbjct: 437 QEGQGLPLK 445


>sp|CPKA_PYRFU|CARBAMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QAGRGLPVQP 10
QA G+P QP
Sbjct: 68 QATYGIPAQP 77




295|Sequence|1471|1480|LPVQPHSGRS

>sp|PGK_METFV|PHOSPHOGLYCERATE kinase|Methanothermus fervidus (strain ATCC 43054

Query: 2 PVQPHSGR 9
PV PH+GR
Sbjct: 26 PVDPHTGR 33


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 3 VQPHSGRS 10
VQPHSG S
Sbjct: 91 VQPHSGSS 98


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 3 VQPHSGRS 10
VQPHSG S
Sbjct: 91 VQPHSGSS 98


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPVQPHSG 8
LP+ PH+G
Sbjct: 428 LPLNPHTG 435


>sp|GLYA_METBF|SERINE hydroxymethyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VQPHSG 8
VQPHSG
Sbjct: 89 VQPHSG 94


>sp|GLYA_METMA|SERINE hydroxymethyltransferase|Methanosarcina mazei (strain ATCC

Query: 3 VQPHSG 8
VQPHSG
Sbjct: 89 VQPHSG 94


>sp|GLYA_METAC|SERINE hydroxymethyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 3 VQPHSG 8
VQPHSG
Sbjct: 89 VQPHSG 94


>sp|GLYA_METPE|SERINE hydroxymethyltransferase|Methanosphaerula palustris (strain ATCC

Query: 3 VQPHSG 8
VQPHSG
Sbjct: 89 VQPHSG 94


>sp|GLYA_METHJ|SERINE hydroxymethyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 3 VQPHSG 8
VQPHSG
Sbjct: 89 VQPHSG 94


>sp|GLYA_HALMA|SERINE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC

Query: 3 VQPHSG 8
VQPHSG
Sbjct: 91 VQPHSG 96


>sp|GLYA_NATPD|SERINE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC

Query: 3 VQPHSG 8
VQPHSG
Sbjct: 91 VQPHSG 96


>sp|GLYA_HALWD|SERINE hydroxymethyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 VQPHSG 8
VQPHSG
Sbjct: 91 VQPHSG 96


>sp|GLYA_HALLT|SERINE hydroxymethyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 3 VQPHSG 8
VQPHSG
Sbjct: 91 VQPHSG 96


>sp|GLYA_METTP|SERINE hydroxymethyltransferase|Methanothrix thermoacetophila (strain

Query: 3 VQPHSG 8
VQPHSG
Sbjct: 89 VQPHSG 94


>sp|K6PF_PYRFU|ADP-SPECIFIC phosphofructokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 PHSGR 9
PHSGR
Sbjct: 183 PHSGR 187


>sp|CFBD_METJA|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanocaldococcus

Query: 1 LPVQPHSG 8
+PV+ HSG
Sbjct: 115 IPVEVHSG 122


>sp|SDO1_AERPE|RIBOSOME maturation protein SDO1 homolog|Aeropyrum pernix (strain ATCC

Query: 5 PHSGRS 10
PHSGR+
Sbjct: 173 PHSGRA 178


>sp|GCS2_HALMA|GLUTAMATE--CYSTEINE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 VQPHSG 8
V+PHSG
Sbjct: 229 VRPHSG 234




296|Sequence|1476|1485|HSGRSGLQGP

>sp|PELO_METMP|PROTEIN pelota homolog|Methanococcus maripaludis (strain DSM 14266

Query: 1 HSGRSGL 7
H+G+SGL
Sbjct: 229 HTGKSGL 235


>sp|PELO_METM7|PROTEIN pelota homolog|Methanococcus maripaludis (strain C7 /

Query: 1 HSGRSGL 7
H+G+SGL
Sbjct: 229 HTGKSGL 235


>sp|PELO_METM6|PROTEIN pelota homolog|Methanococcus maripaludis (strain C6 /

Query: 1 HSGRSGL 7
H+G+SGL
Sbjct: 229 HTGKSGL 235


>sp|PELO_METM5|PROTEIN pelota homolog|Methanococcus maripaludis (strain C5 /

Query: 1 HSGRSGL 7
H+G+SGL
Sbjct: 229 HTGKSGL 235


>sp|Y1940_AERPE|UNCHARACTERIZED protein APE_1940.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 SGRSGLQG 9
+GRSGL G
Sbjct: 61 AGRSGLVG 68


>sp|RS4_METB6|SMALL ribosomal subunit protein uS4|Methanoregula boonei (strain DSM

Query: 1 HSGRSGLQGP 10
H R+GL GP
Sbjct: 81 HMQRAGLLGP 90




297|Sequence|1481|1490|GLQGPDHRLL

>sp|BTUCA_HALSA|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 4 GPDHRLL 10
GPDHR+L
Sbjct: 311 GPDHRVL 317


>sp|BTUCA_HALS3|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 4 GPDHRLL 10
GPDHR+L
Sbjct: 311 GPDHRVL 317


>sp|Y1065_METJA|UNCHARACTERIZED protein MJ1065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LQGPDHRL 9
++GPDH L
Sbjct: 230 MEGPDHAL 237


>sp|MSRA_METBU|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcoides burtonii

Query: 3 QGPDH 7
QGPDH
Sbjct: 85 QGPDH 89


>sp|RL3_HALWD|LARGE ribosomal subunit protein uL3|Haloquadratum walsbyi (strain DSM

Query: 2 LQGPDHRLL 10
L GPD RLL
Sbjct: 302 LPGPDQRLL 310


>sp|RPO5_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo5|Aeropyrum pernix (strain ATCC 700893

Query: 5 PDHRLL 10
P+HRLL
Sbjct: 19 PEHRLL 24


>sp|THII_HALSA|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC 700922

Query: 4 GPDHR 8
GPDHR
Sbjct: 220 GPDHR 224


>sp|THII_HALS3|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC 29341

Query: 4 GPDHR 8
GPDHR
Sbjct: 220 GPDHR 224


>sp|RS8E_SACS2|SMALL ribosomal subunit protein eS8|Saccharolobus solfataricus (strain

Query: 3 QGPDHR 8
QGPD+R
Sbjct: 5 QGPDNR 10


>sp|RS8E_SACI4|SMALL ribosomal subunit protein eS8|Saccharolobus islandicus (strain

Query: 3 QGPDHR 8
QGPD+R
Sbjct: 5 QGPDNR 10


>sp|RS8E_SACI7|SMALL ribosomal subunit protein eS8|Saccharolobus islandicus (strain

Query: 3 QGPDHR 8
QGPD+R
Sbjct: 5 QGPDNR 10


>sp|RS8E_SACI6|SMALL ribosomal subunit protein eS8|Saccharolobus islandicus (strain

Query: 3 QGPDHR 8
QGPD+R
Sbjct: 5 QGPDNR 10


>sp|RS8E_SACI3|SMALL ribosomal subunit protein eS8|Saccharolobus islandicus (strain

Query: 3 QGPDHR 8
QGPD+R
Sbjct: 5 QGPDNR 10


>sp|RS8E_SACI2|SMALL ribosomal subunit protein eS8|Saccharolobus islandicus (strain

Query: 3 QGPDHR 8
QGPD+R
Sbjct: 5 QGPDNR 10


>sp|RS8E_SACI1|SMALL ribosomal subunit protein eS8|Saccharolobus islandicus (strain

Query: 3 QGPDHR 8
QGPD+R
Sbjct: 5 QGPDNR 10


>sp|COFH_METTH|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanothermobacter thermautotrophicus

Query: 2 LQGPDHRL 9
+ GP+HR+
Sbjct: 223 IDGPEHRV 230


>sp|Y1653_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 1 GLQGPDH 7
G Q PDH
Sbjct: 359 GSQSPDH 365


>sp|NARH_HALMT|RESPIRATORY nitrate reductase subunit beta|Haloferax mediterranei (strain ATCC

Query: 3 QGPDHRLL 10
QGP H+L+
Sbjct: 247 QGPIHKLV 254


>sp|ARGB_METAC|ACETYLGLUTAMATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LQGPDH 7
L GPDH
Sbjct: 291 LYGPDH 296


>sp|ADEC_METTH|ADENINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GLQGPDHRLL 10
+ G DHR+L
Sbjct: 456 AVSGDDHRVL 465




298|Sequence|1486|1499|DHRLLIGASSRRSQ

>sp|GGR_METB6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoregula boonei (strain DSM 21154

Query: 1 DHRLLIGASSR 11
DH +L+G ++R
Sbjct: 273 DHLMLVGDAAR 283


>sp|DNAK_PICTO|CHAPERONE protein DnaK|Picrophilus torridus (strain ATCC 700027

Query: 1 DHRLLIGASSRR 12
D +LL+G +RR
Sbjct: 49 DGQLLVGEPARR 60


>sp|PURA_METTH|ADENYLOSUCCINATE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DHRLLIGA 8
D RLLIGA
Sbjct: 65 DARLLIGA 72


>sp|AROA_METJA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocaldococcus jannaschii (strain

Query: 2 HRLLIGAS 9
HR +IGAS
Sbjct: 26 HRAVIGAS 33






THE END