1|SequenceR|10|1|LLLVGLGMVM
>sp|VF134_ASFWA|EARLY transcription factor large subunit|African swine fever virus (isolate
Query: 1 LLLVGLGMV 9
LLL GLG++
Sbjct: 1313 LLLTGLGVI 1321
>sp|ETFL_ASFM2|EARLY transcription factor large subunit|African swine fever virus (isolate
Query: 1 LLLVGLGMV 9
LLL GLG++
Sbjct: 1313 LLLTGLGVI 1321
>sp|ETFL_ASFK5|EARLY transcription factor large subunit|African swine fever virus (isolate
Query: 1 LLLVGLGMV 9
LLL GLG++
Sbjct: 1313 LLLTGLGVI 1321
>sp|ETFL_ASFB7|EARLY transcription factor large subunit|African swine fever virus (strain
Query: 1 LLLVGLGMV 9
LLL GLG++
Sbjct: 1313 LLLTGLGVI 1321
>sp|EFTL_ASFP4|EARLY transcription factor large subunit|African swine fever virus (isolate
Query: 1 LLLVGLGMV 9
LLL GLG++
Sbjct: 1313 LLLTGLGVI 1321
2|SequenceR|15|6|GLVFVLLLVG
>sp|GH_SHV21|ENVELOPE glycoprotein H|Saimiriine herpesvirus 2 (strain 11)
Query: 2 LVFVLLLVG 10
+VF+L LVG
Sbjct: 697 MVFILFLVG 705
>sp|L_MMVR|RNA-DIRECTED RNA polymerase L|Maize mosaic virus (isolate Maize/United
Query: 1 GLVFVLLLVG 10
GLV L+L+G
Sbjct: 1378 GLVLFLMLIG 1387
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GLVFVLLLV 9
G++F+LL++
Sbjct: 266 GIIFILLML 274
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GLVFVLLLV 9
G++F+LL++
Sbjct: 266 GIIFILLML 274
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GLVFVLLLV 9
G++F+LL++
Sbjct: 266 GIIFILLML 274
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 LVFVLLLVG 10
LV VLLL+G
Sbjct: 2252 LVCVLLLIG 2260
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GLVFVLLLV 9
G++F+LL++
Sbjct: 266 GIIFILLML 274
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GLVFVLLLV 9
G++F+LL++
Sbjct: 266 GIIFILLML 274
3|SequenceR|20|11|PTLGLGLVFV
>sp|VP3_FDVS|PUTATIVE structural protein VP3|Fiji disease virus (isolate Sugarcane)
Query: 1 PTLGLGLVFV 10
P LG+GL+FV
Sbjct: 827 PVLGIGLIFV 836
>sp|UL43_PSHV1|MEMBRANE protein UL43|Psittacid herpesvirus 1 (isolate Amazon
Query: 1 PTLGLGLV 8
PTLGLG V
Sbjct: 396 PTLGLGCV 403
>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)
Query: 2 TLGLGLVFV 10
TLG+GL F+
Sbjct: 2166 TLGVGLAFM 2174
>sp|VF307_IIV3|UNCHARACTERIZED protein 033L|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 PTLGLGLVF 9
PT+GLG+ +
Sbjct: 118 PTIGLGVEY 126
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 3 LGLGLVFV 10
LGLG VFV
Sbjct: 43 LGLGNVFV 50
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LGLGLVFV 10
LGLG VFV
Sbjct: 41 LGLGNVFV 48
4|SequenceR|25|16|QALTPPTLGL
>sp|TUBZ_CBCP|TUBULIN-LIKE protein TubZ|Clostridium botulinum C phage (Clostridium
Query: 2 ALTPPTLGL 10
+TPP LGL
Sbjct: 103 GITPPILGL 111
>sp|LT_POVLY|LARGE T antigen|B-lymphotropic polyomavirus (LPV)
Query: 1 QALTPPTLGL 10
+ L PPT+G+
Sbjct: 593 EYLLPPTIGV 602
>sp|P3_RGDV|OUTER capsid protein P3|Rice gall dwarf virus (RGDV)
Query: 1 QALTPPT 7
QA+TPP+
Sbjct: 395 QAITPPS 401
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 QALTPPTLGL 10
Q +TP LGL
Sbjct: 566 QTITPTELGL 575
>sp|DPOL1_BPK54|DEPOLYMERASE 1, capsule K8-specific|Klebsiella phage K5-4 (Bacteriophage K5-4)
Query: 3 LTPPTLGL 10
+TPP LG+
Sbjct: 208 ITPPPLGV 215
>sp|ITP_PSHV1|INNER tegument protein|Psittacid herpesvirus 1 (isolate Amazon
Query: 1 QALTPPTLG 9
QAL PP +G
Sbjct: 738 QALPPPYVG 746
5|SequenceR|30|21|YRSNDQALTP
>sp|NS1_PAVCN|INITIATOR protein NS1|Canine parvovirus type 2 (isolate
Query: 2 RSNDQALTP 10
+S DQ LTP
Sbjct: 591 QSQDQVLTP 599
>sp|CAPSD_BGYMV|CAPSID protein|Bean golden yellow mosaic virus
Query: 1 YRSNDQAL 8
Y SNDQAL
Sbjct: 185 YASNDQAL 192
>sp|SPIKE_ADEP3|FIBER protein|Porcine adenovirus A serotype 3
Query: 1 YRSNDQALTP 10
+RSND + P
Sbjct: 336 FRSNDSVIEP 345
>sp|PORTL_BPE15|PORTAL protein|Salmonella phage epsilon15
Query: 2 RSNDQALTP 10
R ND+AL P
Sbjct: 401 RLNDEALNP 409
6|SequenceR|35|26|TLFHTYRSND
>sp|Y038_OSHVF|PUTATIVE RING finger protein ORF38|Ostreid herpesvirus 1 (isolate France)
Query: 3 FHTYRS 8
FHTYR+
Sbjct: 71 FHTYRN 76
>sp|PORI_BPPA2|OUTER membrane porin protein LC|Enterobacteria phage PA-2 (Bacteriophage
Query: 1 TLFHTYRSND 10
T F TYR+ND
Sbjct: 152 TGFATYRNND 161
>sp|463L_IIV6|PROBABLE lipid hydrolase 463L|Invertebrate iridescent virus 6 (IIV-6)
Query: 1 TLFHTYRSN 9
TLF TY+ N
Sbjct: 226 TLFSTYKQN 234
>sp|UL79_SHV21|GENE 18 protein|Saimiriine herpesvirus 2 (strain 11)
Query: 4 HTYRSND 10
HTY +ND
Sbjct: 232 HTYMTND 238
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 TLFHTYRSN 9
TLFH Y N
Sbjct: 615 TLFHYYNVN 623
>sp|VP2_ROTSR|INNER capsid protein VP2|Rotavirus A (strain RVA/SA11-Ramig/G3P[X])
Query: 1 TLFHTYRSN 9
TLFH Y N
Sbjct: 601 TLFHYYNVN 609
>sp|VP2_ROTS1|INNER capsid protein VP2|Rotavirus A (strain RVA/SA11-Both/G3P5B[2])
Query: 1 TLFHTYRSN 9
TLFH Y N
Sbjct: 600 TLFHYYNVN 608
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 TLFHTYRSN 9
TLFH Y N
Sbjct: 609 TLFHYYNVN 617
>sp|VP2_ROTSH|INNER capsid protein VP2|Rotavirus A (isolate RVA/Monkey/South
Query: 1 TLFHTYRSN 9
TLFH Y N
Sbjct: 601 TLFHYYNVN 609
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 TLFHTYRSN 9
TLFH Y N
Sbjct: 609 TLFHYYNVN 617
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 TLFHTYRSN 9
TLFH Y N
Sbjct: 609 TLFHYYNVN 617
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 TLFHTYRSN 9
TLFH Y N
Sbjct: 609 TLFHYYNVN 617
>sp|VP2_ROTBU|INNER capsid protein VP2|Rotavirus A (strain RVA/Cow/United
Query: 1 TLFHTYRSN 9
TLFH Y N
Sbjct: 600 TLFHYYNVN 608
7|SequenceR|40|31|ADYHQTLFHT
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 2 DYHQTLF 8
DYH T F
Sbjct: 452 DYHSTFF 458
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 2 DYHQTLFHT 10
D H T FHT
Sbjct: 732 DLHGTKFHT 740
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 YHQTLF 8
YH+TLF
Sbjct: 762 YHKTLF 767
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 YHQTLF 8
YH+TLF
Sbjct: 762 YHKTLF 767
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 YHQTLF 8
YH+TLF
Sbjct: 762 YHKTLF 767
>sp|ENV_WDSV|ENVELOPE glycoprotein|Walleye dermal sarcoma virus (WDSV)
Query: 1 ADYHQT 6
ADYH+T
Sbjct: 1093 ADYHET 1098
8|SequenceR|45|36|RGQPKADYHQ
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 GQPKADYH 9
G+P+A YH
Sbjct: 675 GEPRAHYH 682
>sp|YL115_MIMIV|PUTATIVE helicase L115|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 PKADYH 9
PK+DYH
Sbjct: 444 PKSDYH 449
>sp|RDRP_CLBVS|RNA replication polyprotein|Citrus leaf blotch virus (isolate
Query: 1 RGQPKADYH 9
RGQ DYH
Sbjct: 653 RGQFSTDYH 661
>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate
Query: 1 RGQPKADY 8
RGQ +ADY
Sbjct: 588 RGQGEADY 595
>sp|YR401_MIMIV|UNCHARACTERIZED protein R401|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 PKADYH 9
PK DYH
Sbjct: 147 PKHDYH 152
>sp|ORF4B_MERS1|NON-STRUCTURAL protein ORF4b|Middle East respiratory syndrome-related
Query: 2 GQPKADYH 9
GQP ++YH
Sbjct: 87 GQPVSEYH 94
>sp|NS1AB_OASV1|NON-STRUCTURAL polyprotein 1AB|Ovine astrovirus 1 (OAstV-1)
Query: 1 RGQPKADY 8
RG PK DY
Sbjct: 1343 RGGPKFDY 1350
>sp|GAG_BIV29|GAG polyprotein|Bovine immunodeficiency virus (strain R29)
Query: 1 RGQPKADYHQ 10
R QP+ ++HQ
Sbjct: 451 RSQPQNNFHQ 460
>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 1 RGQPKADYH 9
RG P AD H
Sbjct: 942 RGGPLADVH 950
>sp|RPOTF_PRRSL|REPLICASE polyprotein 1TF|Porcine reproductive and respiratory syndrome
Query: 1 RGQPKADYH 9
RG P AD H
Sbjct: 942 RGGPLADVH 950
>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 1 RGQPKADYH 9
RG P AD H
Sbjct: 925 RGGPLADVH 933
>sp|MOBD_BPT4|PROBABLE mobile endonuclease D|Enterobacteria phage T4 (Bacteriophage T4)
Query: 2 GQPKADYHQ 10
G PK++YH+
Sbjct: 233 GYPKSNYHR 241
>sp|HEMA_I68A3|HEMAGGLUTININ A virus (strain A/Turkey/Ontario/6118/1968
Query: 2 GQPKADYH 9
G PK D H
Sbjct: 79 GNPKCDIH 86
>sp|1ATF_PRRSS|TRUNCATED polyprotein 1aTF|Porcine reproductive and respiratory syndrome
Query: 1 RGQPKADYH 9
RG P AD H
Sbjct: 925 RGGPLADVH 933
>sp|RDRP_NMV|RNA replication protein|Narcissus mosaic virus (NMV)
Query: 5 KADYHQ 10
+ADYHQ
Sbjct: 1564 EADYHQ 1569
>sp|GLYC_HRSV8|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 3 QPKADYH 9
+PK DYH
Sbjct: 158 KPKDDYH 164
>sp|GLYC_HRSV1|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 3 QPKADYH 9
+PK DYH
Sbjct: 158 KPKDDYH 164
9|SequenceR|50|41|CYRDDRGQPK
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 RDDRGQP 9
R DRGQP
Sbjct: 726 RKDRGQP 732
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 RDDRGQP 9
R DRGQP
Sbjct: 722 RKDRGQP 728
>sp|VINT_LAMBD|INTEGRASE phage lambda (Bacteriophage lambda)
Query: 2 YRDDRGQ 8
YRDDRG+
Sbjct: 342 YRDDRGR 348
>sp|VINT_BP434|INTEGRASE phage 434 (Bacteriophage 434)
Query: 2 YRDDRGQ 8
YRDDRG+
Sbjct: 342 YRDDRGR 348
>sp|DPOL_ADEB2|DNA polymerase|Bovine adenovirus 2 (BAdV-2) (Mastadenovirus
Query: 2 YRDDRGQP 9
Y +DRG+P
Sbjct: 810 YAEDRGKP 817
>sp|DPOL_BPKVM|DNA-DIRECTED DNA polymerase|Vibrio phage KVP40 (isolate Vibrio
Query: 2 YRDDRGQP 9
Y DD+G P
Sbjct: 741 YSDDKGNP 748
>sp|NCAP_ISAV8|NUCLEOPROTEIN salmon anemia virus (isolate
Query: 2 YRDDRG 7
YR+DRG
Sbjct: 33 YREDRG 38
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CYRDDRGQP 9
C+R D G P
Sbjct: 193 CFRTDGGLP 201
>sp|UL32_EHV1B|PACKAGING protein UL32 homolog|Equine herpesvirus 1 (strain Ab4p)
Query: 1 CYRDDRGQPK 10
C+R D G P+
Sbjct: 186 CFRTDGGVPR 195
>sp|UL32_EHV1A|PACKAGING protein UL32 homolog|Equine herpesvirus 1 (strain AB1)
Query: 1 CYRDDRGQPK 10
C+R D G P+
Sbjct: 186 CFRTDGGVPR 195
>sp|UL32_GAHVM|PACKAGING protein UL32 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 1 CYRDDRGQP 9
C+R D G P
Sbjct: 187 CFRTDGGVP 195
>sp|NS1AB_TASV1|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 1 (TAstV-1)
Query: 1 CYRDDR 6
CY DDR
Sbjct: 1469 CYGDDR 1474
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 YRDDRGQP 9
Y +DRG P
Sbjct: 917 YEEDRGTP 924
>sp|NS1AB_ANV1|NON-STRUCTURAL polyprotein 1AB|Avian nephritis virus 1 (ANV-1)
Query: 1 CYRDDR 6
CY DDR
Sbjct: 1373 CYGDDR 1378
>sp|NS1AB_TASV2|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 2 (TAstV-2)
Query: 1 CYRDDR 6
CY DDR
Sbjct: 1498 CYGDDR 1503
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 3 RDDRGQP 9
+DD+GQP
Sbjct: 55 QDDQGQP 61
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 1 CYRDDRGQP 9
C+R D G P
Sbjct: 214 CFRTDGGVP 222
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 CYRDDRGQP 9
Y +DRG P
Sbjct: 992 LYEEDRGTP 1000
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 CYRDDRGQP 9
Y +DRG P
Sbjct: 992 LYEEDRGTP 1000
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 1 CYRDDRGQP 9
C+R D G P
Sbjct: 214 CFRTDGGVP 222
10|SequenceR|55|46|RMISECYRDD
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 RMISECYRD 9
++ISEC RD
Sbjct: 2049 KVISECVRD 2057
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 RMISECYRD 9
++ISEC RD
Sbjct: 2049 KVISECVRD 2057
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 RMISECYRD 9
++ISEC RD
Sbjct: 2049 KVISECVRD 2057
>sp|VIL6_HHV8P|VIRAL interleukin-6 homolog|Human herpesvirus 8 type P
Query: 2 MISECYRD 9
+I EC+RD
Sbjct: 45 VIDECFRD 52
>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)
Query: 2 MISECYRD 9
M ECYRD
Sbjct: 2752 MQHECYRD 2759
>sp|IORF_CVHN1|PROTEIN I|Human coronavirus HKU1 (isolate N1)
Query: 4 SECYRD 9
S CYRD
Sbjct: 109 SSCYRD 114
>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus
Query: 1 RMISECYRD 9
R+I CY D
Sbjct: 1018 RLIHRCYSD 1026
>sp|LOADL_BPR69|SLIDING-CLAMP-LOADER large subunit|Escherichia phage RB69 (Bacteriophage RB69)
Query: 1 RMISECY 7
+++SECY
Sbjct: 267 KLVSECY 273
>sp|YR259_MIMIV|UNCHARACTERIZED protein R259|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 RMISECYRD 9
R + +CYR+
Sbjct: 177 RSVKDCYRN 185
>sp|Y383B_ATV|TNPB-LIKE protein ORF383B|Acidianus two-tailed virus (ATV)
Query: 1 RMISECYRD 9
++ +CYRD
Sbjct: 74 KVTEDCYRD 82
>sp|Y383A_ATV|TNPB-LIKE protein ORF383a|Acidianus two-tailed virus (ATV)
Query: 1 RMISECYRD 9
++ ++CYRD
Sbjct: 74 KVSADCYRD 82
11|SequenceR|60|51|TLGRRRMISE
>sp|VG71_GAHVM|UNCHARACTERIZED gene 71 protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 1 TLGRRRMIS 9
+LGRRR IS
Sbjct: 138 SLGRRRGIS 146
12|SequenceR|65|56|DKCPSTLGRR
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 DKCPST 6
DKCPST
Sbjct: 357 DKCPST 362
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 DKCPST 6
DKCPST
Sbjct: 357 DKCPST 362
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 DKCPST 6
DKCPST
Sbjct: 357 DKCPST 362
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 DKCPST 6
DKCPST
Sbjct: 357 DKCPST 362
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 DKCPST 6
DKCPST
Sbjct: 357 DKCPST 362
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 DKCPST 6
DKCPST
Sbjct: 357 DKCPST 362
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 DKCPST 6
DKCPST
Sbjct: 357 DKCPST 362
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 DKCPST 6
DKCPST
Sbjct: 357 DKCPST 362
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 DKCPST 6
DKCPST
Sbjct: 357 DKCPST 362
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 DKCPST 6
DKCPST
Sbjct: 357 DKCPST 362
>sp|PB1F2_I68A3|PROTEIN PB1-F2|Influenza A virus (strain A/Turkey/Ontario/6118/1968
Query: 1 DKCPSTLGR 9
D+CP T+ R
Sbjct: 40 DRCPKTMNR 48
>sp|PB1F2_I66A0|PROTEIN PB1-F2|Influenza A virus (strain A/Turkey/Ontario/7732/1966
Query: 1 DKCPSTLGR 9
D CP T+ R
Sbjct: 40 DHCPKTMNR 48
13|SequenceR|70|61|IFTNIDKCPS
>sp|P3_PCVC|UNCHARACTERIZED protein p3|Penicillium chrysogenum virus (isolate Caston/2003)
Query: 1 IFTNIDKCP 9
+F +DKCP
Sbjct: 93 VFGGLDKCP 101
>sp|TRM1_PSHV1|TRIPARTITE terminase subunit 1|Psittacid herpesvirus 1 (isolate Amazon
Query: 2 FTNIDKC 8
F+N+D+C
Sbjct: 595 FSNLDRC 601
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 TNIDKCP 9
+N+D CP
Sbjct: 807 SNVDHCP 813
>sp|Y286B_AFV2P|UNCHARACTERIZED protein ORF286b|Acidianus filamentous virus 2 (isolate
Query: 2 FTNIDKCP 9
FT DKCP
Sbjct: 255 FTIFDKCP 262
>sp|VHR2_SWPVK|PROBABLE host range protein 2|Swinepox virus (strain Kasza) (SWPV)
Query: 1 IFTNIDKC 8
IF++ID+C
Sbjct: 99 IFSDIDRC 106
>sp|VF098_IIV3|UNCHARACTERIZED protein 038R|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 IFTNIDKCPS 10
+FT I++C S
Sbjct: 479 LFTQIEQCTS 488
>sp|ENV_EIAVY|ENVELOPE glycoprotein|Equine infectious anemia virus (strain
Query: 2 FTNIDKCPS 10
FTNI C S
Sbjct: 338 FTNITSCNS 346
>sp|ENV_EIAV1|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 2 FTNIDKCPS 10
FTNI C S
Sbjct: 338 FTNITSCNS 346
>sp|OE56_GVCPM|OCCLUSION-DERIVED virus envelope protein E56|Cydia pomonella granulosis virus
Query: 2 FTNIDKC 8
F+NID C
Sbjct: 195 FSNIDAC 201
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 FTNIDKCPS 10
FT ID+ PS
Sbjct: 1087 FTRIDESPS 1095
14|SequenceR|75|66|RKNGHIFTNI
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 KNGHIFTN 9
K GHI TN
Sbjct: 417 KPGHIMTN 424
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 KNGHIFTN 9
K GHI TN
Sbjct: 417 KPGHIMTN 424
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 KNGHIFTN 9
K GHI TN
Sbjct: 417 KPGHIMTN 424
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 KNGHIFTN 9
K GHI TN
Sbjct: 417 KPGHIMTN 424
>sp|VGE3_EHV2|SUSHI domain-containing protein E3|Equine herpesvirus 2 (strain 86/87)
Query: 2 KNGHIFTN 9
KNG I+TN
Sbjct: 83 KNGTIWTN 90
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 3 NGHIFTN 9
+GHIFT+
Sbjct: 178 SGHIFTS 184
>sp|YL076_MIMIV|PUTATIVE BTB/POZ domain-containing protein L76|Acanthamoeba polyphaga
Query: 1 RKNGHIFTN 9
KN HIF N
Sbjct: 316 EKNTHIFNN 324
>sp|RDRP_BNYVS|REPLICASE necrotic yellow vein virus
Query: 3 NGHIFTNI 10
NGH+F ++
Sbjct: 1976 NGHLFPSV 1983
>sp|242L_IIV6|PUTATIVE GIY-YIG domain-containing protein 242L|Invertebrate iridescent
Query: 2 KNGHIFTNI 10
KNG+I+T I
Sbjct: 15 KNGNIYTGI 23
>sp|VG03_BPML5|GENE 3 protein|Mycobacterium phage L5 (Mycobacteriophage L5)
Query: 2 KNGHIFTNI 10
+NGH+ T +
Sbjct: 26 ENGHVLTRL 34
15|SequenceR|80|71|IAKISRKNGH
>sp|CAPSD_PCV87|CAPSID protein|Peanut clump virus (isolate 87/TGTA2)
Query: 1 IAKISRKNGH 10
IA++SR GH
Sbjct: 4 IAEVSRGGGH 13
16|SequenceR|85|76|NKNECIAKIS
>sp|PRIM_SHV21|DNA primase|Saimiriine herpesvirus 2 (strain 11)
Query: 1 NKNECIAKIS 10
N N+CIA +S
Sbjct: 818 NSNKCIAHMS 827
>sp|DBH2_BPSPB|DNA-BINDING protein HU 2|Bacillus phage SPbeta (Bacillus phage
Query: 1 NKNECIAKIS 10
NK E IAK++
Sbjct: 2 NKTELIAKVA 11
>sp|MCP_PSHV1|MAJOR capsid protein|Psittacid herpesvirus 1 (isolate Amazon
Query: 1 NKNECIAKI 9
+KN C+A++
Sbjct: 1314 DKNRCLARL 1322
>sp|L_RSVT|RNA-DIRECTED RNA polymerase L|Rice stripe virus (isolate T)
Query: 1 NKNECI 6
NKNEC+
Sbjct: 1404 NKNECM 1409
>sp|YL792_MIMIV|UNCHARACTERIZED protein L792|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 NECIAKIS 10
NEC+ KI+
Sbjct: 192 NECVVKIT 199
>sp|CP_CSVMV|PUTATIVE Polyprotein CP|Cassava vein mosaic virus (CsVMV)
Query: 1 NKNECIAKI 9
NK E IAKI
Sbjct: 190 NKTEAIAKI 198
17|SequenceR|90|81|RHPNGNKNEC
>sp|U1141_GAHVG|UNCHARACTERIZED protein US1141|Gallid herpesvirus 2 (strain GA)
Query: 2 HPNGNKN 8
HP GN+N
Sbjct: 49 HPKGNEN 55
>sp|RIR1_GAHVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Gallid herpesvirus 2 (strain
Query: 1 RHPNGNKN 8
RH NG KN
Sbjct: 381 RHVNGEKN 388
>sp|GD_GAHVM|ENVELOPE glycoprotein D|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 2 HPNGNKN 8
HP GN+N
Sbjct: 49 HPKGNEN 55
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 RHPNGNKNEC 10
+HP+ N C
Sbjct: 593 KHPDATYNRC 602
>sp|NS1_INBLE|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Lee/1940)
Query: 1 RHPNGNKN 8
+HPNG+K+
Sbjct: 195 KHPNGDKS 202
>sp|NS1_INBGA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GA/1986)
Query: 1 RHPNGNKN 8
+HPNG+K+
Sbjct: 195 KHPNGDKS 202
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 2 HPNGNK 7
HP GNK
Sbjct: 247 HPGGNK 252
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 2 HPNGNK 7
HP GNK
Sbjct: 247 HPGGNK 252
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 2 HPNGNK 7
HP GNK
Sbjct: 247 HPGGNK 252
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 2 HPNGNK 7
HP GNK
Sbjct: 247 HPGGNK 252
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 RHPNGNKN 8
+HPN NK+
Sbjct: 604 KHPNVNKS 611
>sp|POLG_PVYO|GENOME polyprotein|Potato virus Y (strain O)
Query: 1 RHPNGNK 7
+HPNG +
Sbjct: 522 KHPNGTR 528
>sp|GP2_EHV1K|GLYCOPROTEIN gp2|Equine herpesvirus 1 (strain Kentucky
Query: 2 HPNGNKN 8
HPNG N
Sbjct: 123 HPNGRNN 129
>sp|POLG_PVYC|GENOME polyprotein|Potato virus Y (strain C)
Query: 1 RHPNGNK 7
+HPNG +
Sbjct: 522 KHPNGTR 528
>sp|GP2_EHV1V|GLYCOPROTEIN gp2|Equine herpesvirus 1 (strain V592)
Query: 2 HPNGNKN 8
HPNG N
Sbjct: 606 HPNGRNN 612
>sp|GP2_EHV1B|GLYCOPROTEIN gp2|Equine herpesvirus 1 (strain Ab4p)
Query: 2 HPNGNKN 8
HPNG N
Sbjct: 537 HPNGRNN 543
>sp|YR266_MIMIV|PUTATIVE J domain-containing protein R266|Acanthamoeba polyphaga mimivirus
Query: 2 HPNGNKN 8
HP+ NKN
Sbjct: 34 HPDRNKN 40
>sp|FPG_MIMIV|PROBABLE formamidopyrimidine-DNA glycosylase|Acanthamoeba polyphaga
Query: 1 RHPNGNK 7
+ PNGNK
Sbjct: 257 KDPNGNK 263
18|SequenceR|95|86|IRLNERHPNG
>sp|UL96_HHV6U|PROTEIN U68|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IRLNERHP 8
IRL ERHP
Sbjct: 25 IRLGERHP 32
>sp|UL96_HHV6Z|PROTEIN U68|Human herpesvirus 6B (strain Z29)
Query: 1 IRLNERHP 8
IRL ERHP
Sbjct: 25 IRLGERHP 32
>sp|PK1_ASFK5|SERINE/THREONINE-PROTEIN kinase 1|African swine fever virus (isolate
Query: 1 IRLNERHP 8
+RLNE HP
Sbjct: 177 VRLNEDHP 184
>sp|NRAM_I88A1|NEURAMINIDASE A virus (strain A/Duck/Burjatia/652/1988
Query: 3 LNERHPNG 10
LN+RH NG
Sbjct: 138 LNDRHSNG 145
>sp|PK1_ASFM2|SERINE/THREONINE-PROTEIN kinase 1|African swine fever virus (isolate
Query: 1 IRLNERHP 8
+RLNE HP
Sbjct: 177 VRLNETHP 184
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 3 LNERHPNG 10
LN+RH NG
Sbjct: 140 LNDRHSNG 147
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 3 LNERHPNG 10
LN+RH NG
Sbjct: 140 LNDRHSNG 147
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 LNERHPNG 10
LN+RH NG
Sbjct: 140 LNDRHSNG 147
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 3 LNERHPNG 10
LN+RH NG
Sbjct: 140 LNDRHSNG 147
>sp|VSR_RHBVC|SUPPRESSOR of RNA silencing p3|Rice hoja blanca virus (strain
Query: 3 LNERHPN 9
LNERHP+
Sbjct: 47 LNERHPS 53
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IRLNERH 7
IRL+ERH
Sbjct: 424 IRLSERH 430
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IRLNERH 7
IRL+ERH
Sbjct: 424 IRLSERH 430
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 121 LNDKHSNG 128
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 121 LNDKHSNG 128
>sp|NRAM_I80A6|NEURAMINIDASE A virus (strain A/Duck/Hokkaido/8/1980
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I79A7|NEURAMINIDASE A virus (strain A/Grey
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 139 LNDKHSNG 146
>sp|NRAM_I72A1|NEURAMINIDASE A virus (strain A/Duck/Chabarovsk/1610/1972
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I65A0|NEURAMINIDASE A virus (strain A/Quail/Italy/1117/1965
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I63A3|NEURAMINIDASE A virus (strain A/Duck/Ukraine/1/1963
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 125 LNDKHSNG 132
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I68A3|NEURAMINIDASE A virus (strain A/Turkey/Ontario/6118/1968
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 139 LNDKHSNG 146
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 120 LNDKHSNG 127
>sp|NRAM_I89A7|NEURAMINIDASE A virus (strain A/Equine/Jillin/1/1989
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I83A4|NEURAMINIDASE A virus (strain A/Turkey/Ireland/1378/1983
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 112 LNDKHSNG 119
>sp|NRAM_I72A0|NEURAMINIDASE A virus (strain A/Equine/Algiers/1972
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 120 LNDKHSNG 127
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 120 LNDKHSNG 127
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 120 LNDKHSNG 127
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 120 LNDKHSNG 127
>sp|NRAM_I73A0|NEURAMINIDASE A virus (strain A/Parrot/Ulster/1973
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I34A0|NEURAMINIDASE A virus (strain A/Fowl
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 118 LNDKHSNG 125
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 120 LNDKHSNG 127
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 5 ERHPNG 10
ERHP+G
Sbjct: 183 ERHPDG 188
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I90A1|NEURAMINIDASE A virus (strain A/Mallard/Edmonton/220/1990
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I69A2|NEURAMINIDASE A virus (strain A/Equine/Sao
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I63A2|NEURAMINIDASE A virus (strain A/Equine/Miami/1/1963
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 125 LNDKHSNG 132
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 120 LNDKHSNG 127
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 120 LNDKHSNG 127
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 124 LNDKHSNG 131
>sp|NRAM_I79A6|NEURAMINIDASE A virus (strain A/Equine/New
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I91A0|NEURAMINIDASE A virus (strain A/Equine/Alaska/1/1991
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 140 LNDKHSNG 147
>sp|NRAM_I74A2|NEURAMINIDASE A virus (strain A/Duck/Memphis/928/1974
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I86A3|NEURAMINIDASE A virus (strain A/Equine/Tennessee/5/1986
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|GP8_BPMU|UNCHARACTERIZED protein gp8|Escherichia phage Mu (Bacteriophage Mu)
Query: 1 IRLNERHPNG 10
IR+ ER+ NG
Sbjct: 13 IRIQERNNNG 22
>sp|MCP_PBCV1|MAJOR capsid protein|Paramecium bursaria Chlorella virus 1
Query: 1 IRLNERHP 8
IRLN HP
Sbjct: 251 IRLNFNHP 258
>sp|NRAM_I85A5|NEURAMINIDASE A virus (strain A/Equine/Santiago/1/1985
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I81A2|NEURAMINIDASE A virus (strain A/Equine/Kentucky/1/1981)
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I88A4|NEURAMINIDASE A virus (strain A/Herring
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I84A0|NEURAMINIDASE A virus (strain A/Guinea
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I63A1|NEURAMINIDASE A virus (strain A/Turkey/Canada/1963
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I78AC|NEURAMINIDASE A virus (strain A/Turkey/Minnesota/501/1978
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 138 LNDKHSNG 145
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 3 LNERHPNG 10
LN++H NG
Sbjct: 120 LNDKHSNG 127
>sp|UBC2_MIMIV|PROBABLE ubiquitin-conjugating enzyme E2 L709|Acanthamoeba polyphaga
Query: 1 IRLNERHP 8
IRLN HP
Sbjct: 58 IRLNNDHP 65
>sp|ENLYS_BPM10|PSEUDOMUREIN endoisopeptidase PeiW|Methanothermobacter phage psiM100
Query: 1 IRLNERHPN 9
+R+N R PN
Sbjct: 53 VRINGREPN 61
Query: 1 IRLNERHPN 9
+R+N R PN
Sbjct: 89 VRINGREPN 97
Query: 1 IRLNERHPN 9
+R+N R PN
Sbjct: 125 VRINGREPN 133
19|SequenceR|100|91|FSSKSIRLNE
>sp|MTC3_PBCVC|MODIFICATION methylase CviBIII|Paramecium bursaria Chlorella virus NC1A
Query: 1 FSSKSIRLNE 10
F+S +I+LNE
Sbjct: 267 FTSSNIKLNE 276
>sp|P4_BPPH6|PACKAGING enzyme P4|Pseudomonas phage phi6 (Bacteriophage phi-6)
Query: 2 SSKSIRLNE 10
S KSI LNE
Sbjct: 130 SGKSITLNE 138
20|SequenceR|105|96|CTTVQFSSKS
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 1 CTTVQFSSKS 10
C T QFSSKS
Sbjct: 324 CATNQFSSKS 333
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 1 CTTVQFSSKS 10
C T QFSSKS
Sbjct: 330 CATNQFSSKS 339
>sp|VG59_ALHV1|DNA polymerase processivity factor|Alcelaphine herpesvirus 1 (strain
Query: 1 CTTVQFSS 8
CTT++F S
Sbjct: 202 CTTIEFKS 209
21|SequenceR|110|101|GGHLKCTTVQ
>sp|SPIKE_CVBLY|SPIKE glycoprotein|Bovine coronavirus (strain LY-138) (BCoV)
Query: 2 GHLKCTTV 9
G LKCTTV
Sbjct: 17 GDLKCTTV 24
>sp|SPIKE_CVBF|SPIKE glycoprotein|Bovine coronavirus (strain F15) (BCoV)
Query: 2 GHLKCTTV 9
G LKCTTV
Sbjct: 17 GDLKCTTV 24
>sp|SPIKE_CVBV|SPIKE glycoprotein|Bovine coronavirus (strain vaccine) (BCoV)
Query: 2 GHLKCTTV 9
G LKCTTV
Sbjct: 17 GDLKCTTV 24
>sp|SPIKE_CVBQ|SPIKE glycoprotein|Bovine coronavirus (strain Quebec) (BCoV)
Query: 2 GHLKCTTV 9
G LKCTTV
Sbjct: 17 GDLKCTTV 24
>sp|SPIKE_CVBOK|SPIKE glycoprotein|Bovine coronavirus (strain OK-0514) (BCoV)
Query: 2 GHLKCTTV 9
G LKCTTV
Sbjct: 17 GDLKCTTV 24
>sp|SPIKE_CVBL9|SPIKE glycoprotein|Bovine coronavirus (strain L9) (BCoV)
Query: 2 GHLKCTTV 9
G LKCTTV
Sbjct: 17 GDLKCTTV 24
>sp|SPIKE_CVBM|SPIKE glycoprotein|Bovine coronavirus (strain Mebus) (BCoV)
Query: 2 GHLKCTTV 9
G LKCTTV
Sbjct: 17 GDLKCTTV 24
>sp|SPIKE_CVBLS|SPIKE glycoprotein|Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU)
Query: 2 GHLKCTTV 9
G LKCTTV
Sbjct: 17 GDLKCTTV 24
>sp|SPIKE_CVBLU|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-LUN)
Query: 2 GHLKCTTV 9
G LKCTTV
Sbjct: 17 GDLKCTTV 24
>sp|SPIKE_CVBEN|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-ENT)
Query: 2 GHLKCTTV 9
G LKCTTV
Sbjct: 17 GDLKCTTV 24
>sp|ENV_SIVVG|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet
Query: 2 GHLKCTT 8
GHL+CT+
Sbjct: 474 GHLQCTS 480
>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate
Query: 3 HLKCTTVQ 10
HL CTT Q
Sbjct: 171 HLNCTTDQ 178
>sp|ENV_SIVV1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet
Query: 2 GHLKCTT 8
GHL+CT+
Sbjct: 469 GHLQCTS 475
>sp|CAPSD_BLRV|MAJOR capsid protein|Bean leafroll virus (BLRV)
Query: 3 HLKCTTVQ 10
HLK TT+Q
Sbjct: 127 HLKNTTIQ 134
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 GGHLKC 6
GHLKC
Sbjct: 577 AGHLKC 582
>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)
Query: 2 GHLKCTTV 9
GH+ CT V
Sbjct: 2336 GHISCTDV 2343
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 GHLKC 6
GHLKC
Sbjct: 576 GHLKC 580
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 GHLKC 6
GHLKC
Sbjct: 571 GHLKC 575
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 GHLKC 6
GHLKC
Sbjct: 577 GHLKC 581
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 GHLKC 6
GHLKC
Sbjct: 577 GHLKC 581
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 GHLKC 6
GHLKC
Sbjct: 577 GHLKC 581
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 GHLKC 6
GHLKC
Sbjct: 574 GHLKC 578
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 GHLKC 6
GHLKC
Sbjct: 576 GHLKC 580
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 GHLKC 6
GHLKC
Sbjct: 577 GHLKC 581
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 GHLKC 6
GHLKC
Sbjct: 561 GHLKC 565
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 GHLKC 6
GHLKC
Sbjct: 570 GHLKC 574
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 GHLKC 6
GHLKC
Sbjct: 574 GHLKC 578
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 GHLKC 6
GHLKC
Sbjct: 561 GHLKC 565
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GGHLKC 6
GHLKC
Sbjct: 560 AGHLKC 565
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 GHLKC 6
GHLKC
Sbjct: 561 GHLKC 565
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GGHLKC 6
GHLKC
Sbjct: 560 AGHLKC 565
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GGHLKC 6
GHLKC
Sbjct: 559 AGHLKC 564
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GGHLKC 6
GHLKC
Sbjct: 560 AGHLKC 565
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 GHLKC 6
GHLKC
Sbjct: 577 GHLKC 581
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 GHLKC 6
GHLKC
Sbjct: 573 GHLKC 577
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 GHLKC 6
GHLKC
Sbjct: 569 GHLKC 573
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 GHLKC 6
GHLKC
Sbjct: 570 GHLKC 574
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GGHLKC 6
GHLKC
Sbjct: 559 AGHLKC 564
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 GHLKC 6
GHLKC
Sbjct: 561 GHLKC 565
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 GHLKC 6
GHLKC
Sbjct: 561 GHLKC 565
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 GHLKC 6
GHLKC
Sbjct: 561 GHLKC 565
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 GHLKC 6
GHLKC
Sbjct: 561 GHLKC 565
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 GHLKC 6
GHLKC
Sbjct: 577 GHLKC 581
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GGHLKC 6
GHLKC
Sbjct: 559 AGHLKC 564
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GGHLKC 6
GHLKC
Sbjct: 559 AGHLKC 564
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GGHLKC 6
GHLKC
Sbjct: 559 AGHLKC 564
>sp|TRM1_SHV21|TRIPARTITE terminase subunit 1|Saimiriine herpesvirus 2 (strain 11)
Query: 1 GGHLKCTTVQ 10
G H KC V+
Sbjct: 284 GAHKKCANVE 293
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 GHLKC 6
GHLKC
Sbjct: 569 GHLKC 573
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 GHLKC 6
GHLKC
Sbjct: 281 GHLKC 285
>sp|AN_NPVAC|ALKALINE nuclease|Autographa californica nuclear polyhedrosis virus
Query: 2 GHLKC 6
GHLKC
Sbjct: 312 GHLKC 316
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 GHLKC 6
GHLKC
Sbjct: 572 GHLKC 576
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GGHLKC 6
GHLKC
Sbjct: 558 AGHLKC 563
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GGHLKC 6
GHLKC
Sbjct: 558 AGHLKC 563
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GGHLKC 6
GHLKC
Sbjct: 558 AGHLKC 563
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GGHLKC 6
GHLKC
Sbjct: 558 AGHLKC 563
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GGHLKC 6
GHLKC
Sbjct: 558 AGHLKC 563
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 GHLKC 6
GHLKC
Sbjct: 505 GHLKC 509
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 GHLKC 6
GHLKC
Sbjct: 577 GHLKC 581
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 GHLKC 6
GHLKC
Sbjct: 577 GHLKC 581
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 GHLKC 6
GHLKC
Sbjct: 577 GHLKC 581
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 GHLKC 6
GHLKC
Sbjct: 577 GHLKC 581
22|SequenceR|115|106|PPWPSGGHLK
>sp|YL320_MIMIV|UNCHARACTERIZED protein L320|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 PPWPSGGH 8
PPW GG+
Sbjct: 180 PPWGGGGY 187
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 1 PPWPSGGHL 9
P WPS HL
Sbjct: 61 PKWPSSWHL 69
>sp|MCP_ELHVK|MAJOR capsid protein|Elephantid herpesvirus 1 (isolate Asian
Query: 1 PPWPSGGHLK 10
PP+P+ H++
Sbjct: 492 PPYPNEQHMR 501
>sp|YR403_MIMIV|UNCHARACTERIZED protein R403|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 PWPSGGHL 9
P P+GGH+
Sbjct: 191 PGPTGGHV 198
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 2 PWPSGG 7
PWPS G
Sbjct: 881 PWPSSG 886
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 PWPSGG 7
PWPS G
Sbjct: 881 PWPSSG 886
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 PWPSGGHLK 10
PW SG H +
Sbjct: 487 PWISGSHYR 495
>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 3 WPSGGHLK 10
WP+G H K
Sbjct: 295 WPAGEHCK 302
>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)
Query: 2 PWPSGGHLK 10
PW SG H +
Sbjct: 485 PWISGSHYR 493
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 3 WPSGGHLK 10
WP+G H K
Sbjct: 295 WPAGEHCK 302
>sp|VP03_SHV21|PROBABLE membrane antigen 3|Saimiriine herpesvirus 2 (strain 11)
Query: 1 PPWPSGGHLK 10
P W G HLK
Sbjct: 1119 PCWTQGTHLK 1128
>sp|GN_PSHV1|ENVELOPE glycoprotein N|Psittacid herpesvirus 1 (isolate Amazon
Query: 2 PWPSGGH 8
PW S GH
Sbjct: 37 PWGSAGH 43
>sp|VP47_NPVAC|DNA-DIRECTED RNA polymerase subunit p47|Autographa californica nuclear
Query: 3 WPSGGHL 9
W +GGHL
Sbjct: 325 WFNGGHL 331
>sp|POL1_TBRVM|RNA1 polyprotein|Tomato black ring virus (strain
Query: 2 PWPSGGH 8
P P GGH
Sbjct: 1011 PRPEGGH 1017
>sp|AN_PSHV1|ALKALINE nuclease|Psittacid herpesvirus 1 (isolate Amazon
Query: 3 WPSGG 7
WPSGG
Sbjct: 369 WPSGG 373
>sp|NEC2_ALHV1|NUCLEAR egress protein 2|Alcelaphine herpesvirus 1 (strain C500)
Query: 4 PSGGHLK 10
PS GHL+
Sbjct: 216 PSSGHLR 222
>sp|VG11_EHV2|UNCHARACTERIZED gene 11 protein|Equine herpesvirus 2 (strain 86/87)
Query: 3 WPSGGH 8
WP GGH
Sbjct: 389 WPKGGH 394
>sp|TRM1_SHV21|TRIPARTITE terminase subunit 1|Saimiriine herpesvirus 2 (strain 11)
Query: 3 WPSGGHLK 10
W SG H K
Sbjct: 281 WSSGAHKK 288
>sp|VG06_BPMD2|MINOR tail protein Gp6|Mycobacterium phage D29 (Mycobacteriophage D29)
Query: 2 PWPSG 6
PWP+G
Sbjct: 37 PWPAG 41
>sp|E434_ADE12|EARLY E4 34 kDa protein|Human adenovirus A serotype 12
Query: 2 PWPSGGH 8
PW + GH
Sbjct: 285 PWAADGH 291
23|SequenceR|120|111|ARYQCPPWPS
>sp|VP5_RRSVT|PUTATIVE minor structural protein VP5|Rice ragged stunt virus (isolate
Query: 1 ARYQCPPWPS 10
A+ +CP WPS
Sbjct: 790 AQVRCPAWPS 799
>sp|ORF4_SHVX|UNCHARACTERIZED ORF4 protein|Shallot virus X (ShVX)
Query: 1 ARYQCPPWP 9
ARY PP P
Sbjct: 133 ARYTLPPAP 141
>sp|VE5_CRPVK|PROBABLE protein E5|Cottontail rabbit papillomavirus (strain Kansas)
Query: 3 YQCPPWPS 10
Y C P+PS
Sbjct: 7 YACNPFPS 14
>sp|VE5_CRPVW|PROBABLE protein E5|Cottontail rabbit papillomavirus (strain Washington
Query: 3 YQCPPWPS 10
Y C P+PS
Sbjct: 7 YACNPFPS 14
>sp|CVC2_GAHVM|CAPSID vertex component 2|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 6 PPWP 9
PPWP
Sbjct: 29 PPWP 32
>sp|VG58_EHV2|GENE 58 protein|Equine herpesvirus 2 (strain 86/87)
Query: 1 ARYQCPPW 8
A Y CPP+
Sbjct: 125 AVYLCPPY 132
>sp|YO23_BPHC1|PUTATIVE tail sheath protein|Haemophilus phage HP1 (strain HP1c1)
Query: 1 ARYQCPPW 8
ARY P W
Sbjct: 236 ARYSVPMW 243
>sp|POL_SRV2|GAG-PRO-POL polyprotein|Simian retrovirus SRV-2
Query: 1 ARYQCPPWP 9
A+Y P WP
Sbjct: 186 AKYHNPDWP 194
>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)
Query: 1 ARYQCPP 7
A Y+CPP
Sbjct: 5814 ACYRCPP 5820
>sp|POL_SRV1|GAG-PRO-POL polyprotein|Simian retrovirus SRV-1
Query: 1 ARYQCPPWP 9
A+Y P WP
Sbjct: 189 AKYHNPDWP 197
>sp|GAG_SRV2|GAG polyprotein|Simian retrovirus SRV-2
Query: 1 ARYQCPPWP 9
A+Y P WP
Sbjct: 186 AKYHNPDWP 194
>sp|PRO_MPMV|GAG-PRO polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian
Query: 1 ARYQCPPWP 9
A+Y P WP
Sbjct: 188 AKYHNPDWP 196
>sp|PRO_SRV1|GAG-PRO polyprotein|Simian retrovirus SRV-1
Query: 1 ARYQCPPWP 9
A+Y P WP
Sbjct: 189 AKYHNPDWP 197
>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)
Query: 1 ARYQCPP 7
A Y+CPP
Sbjct: 5690 ACYRCPP 5696
>sp|RDRP_BPMS2|RNA-DIRECTED RNA polymerase beta chain|Escherichia phage MS2 (Bacteriophage MS2)
Query: 1 ARYQCPPW 8
R QC PW
Sbjct: 165 VRDQCAPW 172
>sp|GAG_MPMV|GAG polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian
Query: 1 ARYQCPPWP 9
A+Y P WP
Sbjct: 188 AKYHNPDWP 196
>sp|GAG_SRV1|GAG polyprotein|Simian retrovirus SRV-1
Query: 1 ARYQCPPWP 9
A+Y P WP
Sbjct: 189 AKYHNPDWP 197
>sp|PRO_SRV2|GAG-PRO polyprotein|Simian retrovirus SRV-2
Query: 1 ARYQCPPWP 9
A+Y P WP
Sbjct: 186 AKYHNPDWP 194
>sp|POL_MPMV|GAG-PRO-POL polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian
Query: 1 ARYQCPPWP 9
A+Y P WP
Sbjct: 188 AKYHNPDWP 196
>sp|RDRP_BPGA|RNA-DIRECTED RNA polymerase beta chain|Enterobacteria phage GA (Bacteriophage
Query: 1 ARYQCPP 7
ARY+C P
Sbjct: 505 ARYRCKP 511
24|SequenceR|125|116|RFGATARYQC
>sp|RDRP_LOLV|RNA-DIRECTED RNA polymerase|Lolium latent virus (isolate Lolium/USA/US1/-)
Query: 1 RFGATARY 8
+FGA ARY
Sbjct: 1441 KFGAMARY 1448
>sp|UBC4_MIMIV|PROBABLE bifunctional E2/E3 enzyme R795|Acanthamoeba polyphaga mimivirus
Query: 3 GATARYQC 10
GATA Y+C
Sbjct: 977 GATALYEC 984
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 RFGATARYQC 10
RFGA A QC
Sbjct: 15 RFGARAGNQC 24
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 RFGATARYQC 10
RFGA A QC
Sbjct: 15 RFGARAGNQC 24
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain
Query: 1 RFGATARYQC 10
RFGA A QC
Sbjct: 15 RFGARAGNQC 24
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 FGATARYQC 10
G T R+QC
Sbjct: 3426 LGTTCRFQC 3434
>sp|HELI_ICHVA|PROBABLE ATP-dependent helicase 25|Ictalurid herpesvirus 1 (strain Auburn)
Query: 1 RFGATARYQC 10
RFGA Y C
Sbjct: 329 RFGALIEYMC 338
25|SequenceR|130|121|AVVVNRFGAT
>sp|NCAP_TAMVU|NUCLEOPROTEIN mammarenavirus (isolate Rat/United States/W
Query: 1 AVVVNRFGAT 10
A+++N+FG+T
Sbjct: 167 ALLINQFGST 176
>sp|MUZZL_BPCA1|MUZZLE protein|Bacteroides phage crAss001 (Bacteroides phage
Query: 3 VVNRFGA 9
VVNRFG
Sbjct: 904 VVNRFGG 910
>sp|TLP20_NPVOP|TELOKIN-LIKE protein 20 homolog|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 2 VVVNRFGA 9
V NRFGA
Sbjct: 75 VAANRFGA 82
26|SequenceR|135|126|LGNECAVVVN
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5047 LANECAQVLS 5056
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5024 LANECAQVLS 5033
>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5022 LANECAQVLS 5031
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5033 LANECAQVLS 5042
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5030 LANECAQVLS 5039
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5018 LANECAQVLS 5027
>sp|R1AB_CVRSD|REPLICASE polyprotein 1ab|Rat coronavirus (strain 681) (RCV-SDAV)
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 150 LANECAQVLS 159
>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 4888 LANECAQVLS 4897
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5124 LANECAQVLS 5133
>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5077 LANECAQVLS 5086
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5020 LANECAQVLS 5029
>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5084 LANECAQVLS 5093
>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5020 LANECAQVLS 5029
>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5020 LANECAQVLS 5029
>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5020 LANECAQVLS 5029
>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5053 LANECAQVLS 5062
>sp|NCAP_HAZVJ|NUCLEOPROTEIN virus (isolate JC280)
Query: 1 LGNECAVVVN 10
+GN CA +++
Sbjct: 425 VGNPCACIIS 434
>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5105 LANECAQVLS 5114
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5108 LANECAQVLS 5117
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5058 LANECAQVLS 5067
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LGNECAVVVN 10
L NECA V++
Sbjct: 5078 LANECAQVLS 5087
27|SequenceR|140|131|DLHVPLGNEC
>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)
Query: 2 LHVPLGNEC 10
H PLGN C
Sbjct: 77 FHYPLGNHC 85
>sp|GI_HHV23|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain 333)
Query: 2 LHVPLGNEC 10
H PLGN C
Sbjct: 77 FHYPLGNHC 85
>sp|MCE_MYXVU|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Myxoma virus (strain
Query: 1 DLHVPLGNE 9
D +VP GNE
Sbjct: 187 DFYVPHGNE 195
>sp|MCE_MYXVL|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Myxoma virus (strain
Query: 1 DLHVPLGNE 9
D +VP GNE
Sbjct: 187 DFYVPHGNE 195
>sp|MCE_SHEVK|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Sheeppox virus (strain
Query: 1 DLHVPLGNE 9
D ++P GNE
Sbjct: 187 DFYIPHGNE 195
>sp|POL1_GFLV|RNA1 polyprotein|Grapevine fanleaf virus (GFLV)
Query: 2 LHVPLGNE 9
L VP+GNE
Sbjct: 1287 LAVPIGNE 1294
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLGN 8
++H+PLG+
Sbjct: 54 EVHIPLGD 61
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLGN 8
++H+PLG+
Sbjct: 54 EVHIPLGD 61
>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLGN 8
++H+PLG+
Sbjct: 54 EVHIPLGD 61
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLGN 8
++H+PLG+
Sbjct: 54 EVHIPLGD 61
>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLGN 8
++H+PLG+
Sbjct: 54 EVHIPLGD 61
>sp|VIF_HV1MA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLGN 8
++H+PLG+
Sbjct: 54 EVHIPLGD 61
>sp|VIF_HV1LW|TRUNCATED virion infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLGN 8
++H+PLG+
Sbjct: 54 EVHIPLGD 61
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLGN 8
++H+PLG+
Sbjct: 54 EVHIPLGD 61
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLGN 8
++H+PLG+
Sbjct: 54 EVHIPLGD 61
>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLGN 8
++H+PLG+
Sbjct: 54 EVHIPLGD 61
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLGN 8
++H+PLG+
Sbjct: 54 EVHIPLGD 61
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLGN 8
++H+PLG+
Sbjct: 54 EVHIPLGD 61
>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLGN 8
++H+PLG+
Sbjct: 54 EVHIPLGD 61
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLGN 8
++H+PLG+
Sbjct: 54 EVHIPLGD 61
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLGN 8
++H+PLG+
Sbjct: 54 EVHIPLGD 61
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLGN 8
++H+PLG+
Sbjct: 54 EVHIPLGD 61
>sp|VIF_HV1MN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLGN 8
++H+PLG+
Sbjct: 54 EVHIPLGD 61
>sp|VIF_SIVEK|VIRION infectivity factor|Simian immunodeficiency virus (isolate EK505)
Query: 1 DLHVPLG 7
++H+PLG
Sbjct: 54 EIHIPLG 60
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 DLHVPLGNEC 10
D ++P+G +C
Sbjct: 276 DSNLPIGQQC 285
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DLHVPLGNEC 10
D ++P+G +C
Sbjct: 276 DSNLPIGQQC 285
>sp|TRM1_ALHV1|TRIPARTITE terminase subunit 1|Alcelaphine herpesvirus 1 (strain C500)
Query: 1 DLHVPLGNE 9
DLH P G E
Sbjct: 325 DLHSPQGTE 333
>sp|GI_HHV11|ENVELOPE glycoprotein I|Human herpesvirus 1 (strain 17)
Query: 3 HVPLGNEC 10
H P+G++C
Sbjct: 78 HYPMGHKC 85
>sp|VGA_BPG4|A protein|Escherichia phage G4 (Bacteriophage G4)
Query: 3 HVPLGNE 9
H PLGN+
Sbjct: 157 HKPLGND 163
>sp|VIF_SIVMB|VIRION infectivity factor|Simian immunodeficiency virus (isolate MB66)
Query: 1 DLHVPLG 7
++H+PLG
Sbjct: 54 EVHIPLG 60
>sp|VIF_HV1Z6|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLG 7
++H+PLG
Sbjct: 54 EVHIPLG 60
>sp|VIF_HV1Z2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLG 7
++H+PLG
Sbjct: 54 EVHIPLG 60
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLG 7
++H+PLG
Sbjct: 54 EVHIPLG 60
>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLG 7
++H+PLG
Sbjct: 54 EVHIPLG 60
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLG 7
++H+PLG
Sbjct: 54 EVHIPLG 60
>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLG 7
++H+PLG
Sbjct: 54 EVHIPLG 60
>sp|VIF_HV1ET|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLG 7
++H+PLG
Sbjct: 54 EVHIPLG 60
>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLG 7
++H+PLG
Sbjct: 54 EVHIPLG 60
>sp|VIF_HV192|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLG 7
++H+PLG
Sbjct: 54 EVHIPLG 60
>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 DLHVPLG 7
++H+PLG
Sbjct: 54 EVHIPLG 60
>sp|VG75_EHV2|PROBABLE membrane antigen 75|Equine herpesvirus 2 (strain 86/87)
Query: 2 LHVPLGN 8
L VPLGN
Sbjct: 948 LEVPLGN 954
>sp|VE4_HPV13|PROTEIN E4|Human papillomavirus 13
Query: 1 DLHVPL 6
DLHVPL
Sbjct: 50 DLHVPL 55
>sp|YL524_MIMIV|UNCHARACTERIZED protein L524|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 DLHVPLGNE 9
D H LGNE
Sbjct: 272 DYHTLLGNE 280
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 DLHVPLGNEC 10
D H P+ EC
Sbjct: 124 DRHTPIHPEC 133
28|SequenceR|147|136|PRRFISQDLHVP
>sp|Y154_SIRV1|UNCHARACTERIZED protein 154|Sulfolobus islandicus rod-shaped virus 1
Query: 1 PRRFISQDLHVP 12
P RFI+Q ++P
Sbjct: 67 PFRFIAQQYNIP 78
>sp|NSS_TSWV1|NON-STRUCTURAL protein NS-S|Tomato spotted wilt virus (strain
Query: 2 RRFISQDLHVP 12
+RF+SQ +++P
Sbjct: 70 KRFLSQHVYIP 80
>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)
Query: 1 PRRFISQDLH 10
PR F +QDL+
Sbjct: 1861 PRTFTAQDLN 1870
>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)
Query: 1 PRRFISQDLH 10
PR F +QDL+
Sbjct: 1861 PRTFTAQDLN 1870
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 1 PRRFISQDLHVP 12
P RF +DL VP
Sbjct: 39 PNRFRGKDLPVP 50
>sp|055R_FRG3G|UNCHARACTERIZED protein 055R|Frog virus 3 (isolate Goorha)
Query: 2 RRFISQDLHVP 12
RRF SQD P
Sbjct: 338 RRFASQDPGTP 348
>sp|L_CDVO|RNA-DIRECTED RNA polymerase L|Canine distemper virus (strain Onderstepoort)
Query: 4 FISQDLHV 11
FI++D+H+
Sbjct: 338 FITEDIHI 345
>sp|SHUT_ADEP3|SHUTOFF protein|Porcine adenovirus A serotype 3
Query: 2 RRFISQDLH 10
R F+S+D H
Sbjct: 631 RHFVSEDYH 639
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 4 FISQDLHV 11
+I QD+H+
Sbjct: 1272 YIGQDIHI 1279
THE END