1|Sequence|1|10|MVMGLGVLLL
>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)
Query: 1 MVMGLGVL 8
M++GLGVL
Sbjct: 1337 MLLGLGVL 1344
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 MVMGLGVL 8
M++GLGVL
Sbjct: 1337 MLLGLGVL 1344
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 MVMGLGVL 8
M++GLGVL
Sbjct: 1337 MLLGLGVL 1344
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 MVMGLGVL 8
M++GLGVL
Sbjct: 1337 MLLGLGVL 1344
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 MVMGLGV 7
M+MGLGV
Sbjct: 1256 MLMGLGV 1262
>sp|L_CDVO|RNA-DIRECTED RNA polymerase L|Canine distemper virus (strain Onderstepoort)
Query: 1 MVMGLGVL 8
M++GLG+L
Sbjct: 1337 MLLGLGIL 1344
2|Sequence|6|15|GVLLLVFVLG
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 GVLLLVFVL 9
GVLL+VF+L
Sbjct: 2223 GVLLIVFLL 2231
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 GVLLLVFVL 9
G+LLL F+L
Sbjct: 2228 GILLLTFLL 2236
>sp|VP91_NPVBM|CAPSID-ASSOCIATED protein Vp91|Bombyx mori nuclear polyhedrosis virus
Query: 1 GVLLLVFVL 9
GV+LLVF +
Sbjct: 4 GVMLLVFAI 12
>sp|X_HBVC1|PROTEIN X|Hepatitis B virus genotype C
Query: 2 VLLLVFVLG 10
+ L+VFVLG
Sbjct: 127 IRLMVFVLG 135
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 GVLLLVFVL 9
GVLL+ F+L
Sbjct: 2221 GVLLIAFLL 2229
3|Sequence|11|20|VFVLGLGLTP
>sp|DPOL_BPE32|DNA-DIRECTED DNA polymerase|Escherichia phage Phieco32 (Escherichia coli
Query: 2 FVLGLGLTP 10
+V GLGL P
Sbjct: 194 YVFGLGLNP 202
>sp|NCAP_SENDZ|NUCLEOPROTEIN virus (strain Z) (SeV)
Query: 1 VFVLGLGLT 9
VFVLGL +T
Sbjct: 37 VFVLGLSVT 45
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VFVLGLGLTP 10
+F GLG+TP
Sbjct: 30 LFKCGLGITP 39
>sp|CAP6_ADEM1|PRE-PROTEIN VI|Murine adenovirus A serotype 1
Query: 3 VLGLGLTP 10
++GLGL P
Sbjct: 223 IMGLGLQP 230
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 3 VLGLGLTP 10
++G+G+TP
Sbjct: 234 IIGMGVTP 241
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 FVLGLGLT 9
FV+ LGLT
Sbjct: 1343 FVMALGLT 1350
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 FVLGLGLT 9
FV+ LGLT
Sbjct: 1343 FVMALGLT 1350
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 FVLGLGLT 9
FV+ LGLT
Sbjct: 1339 FVMALGLT 1346
4|Sequence|16|25|LGLTPPTLAQ
>sp|RPO2_MIMIV|DNA-DIRECTED RNA polymerase subunit 2|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 LGLTPPTL 8
LG+ PPTL
Sbjct: 81 LGIKPPTL 88
>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)
Query: 1 LGLTPP 6
LGLTPP
Sbjct: 6133 LGLTPP 6138
>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus
Query: 1 LGLTPP 6
LGLTPP
Sbjct: 6108 LGLTPP 6113
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LGLTPP 6
+GLTPP
Sbjct: 6148 MGLTPP 6153
>sp|Y041_OSHVF|UNCHARACTERIZED protein ORF41|Ostreid herpesvirus 1 (isolate France)
Query: 2 GLTPPTL 8
GLTPP L
Sbjct: 603 GLTPPRL 609
>sp|POLG_FMDA1|GENOME polyprotein|Foot-and-mouth disease virus serotype Asia-1
Query: 2 GLTPPT 7
G+TPPT
Sbjct: 632 GMTPPT 637
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 LTPPTLAQ 10
+TPPT+A
Sbjct: 1351 ITPPTVAH 1358
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 LTPPTLAQ 10
+TPPT+A
Sbjct: 1351 ITPPTVAH 1358
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 LTPPTLAQ 10
+TPPT+A
Sbjct: 1352 ITPPTVAH 1359
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 LTPPTLAQ 10
+TPPT+A
Sbjct: 1352 ITPPTVAH 1359
5|Sequence|21|30|PTLAQDNSRY
>sp|TRM1_TUHV2|TRIPARTITE terminase subunit 1|Tupaiid herpesvirus (strain 2) (TuHV-2)
Query: 1 PTLAQDNSRY 10
P LA+ N+RY
Sbjct: 55 PALAEQNARY 64
>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)
Query: 1 PTLAQDNSRY 10
PTL+ NSR+
Sbjct: 6404 PTLSNKNSRW 6413
>sp|CAPSD_ADVG|CAPSID protein VP1|Aleutian mink disease parvovirus (strain
Query: 1 PTLAQDN 7
PT+AQDN
Sbjct: 555 PTVAQDN 561
>sp|DPOL_PBCV1|DNA polymerase|Paramecium bursaria Chlorella virus 1
Query: 1 PTLAQDN 7
PT AQDN
Sbjct: 829 PTFAQDN 835
>sp|RP18_FOWPN|DNA-DIRECTED RNA polymerase 18 kDa|Fowlpox virus (strain NVSL) (FPV)
Query: 2 TLAQDNSRY 10
T++ DNS+Y
Sbjct: 114 TVSYDNSKY 122
>sp|VP11_BPPRD|INFECTIVITY protein P11|Enterobacteria phage PRD1 (Bacteriophage PRD1)
Query: 1 PTLAQDNSRY 10
TLA DN+ Y
Sbjct: 97 ETLAADNAHY 106
6|Sequence|26|35|DNSRYTHFLT
>sp|RIR1_SHV21|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Saimiriine herpesvirus 2 (strain 11)
Query: 2 NSRYTHFLT 10
++RY HFLT
Sbjct: 643 STRYKHFLT 651
>sp|VPRT_ASFM2|CYSTEINE protease S273R|African swine fever virus (isolate
Query: 1 DNSRYTHFLT 10
DN YTHF++
Sbjct: 245 DNVSYTHFIS 254
>sp|VPRT_ASFK5|SUMO-1 cysteine protease S273R|African swine fever virus (isolate
Query: 1 DNSRYTHFLT 10
DN YTHF++
Sbjct: 245 DNVSYTHFIS 254
>sp|RDRP_RBDVR|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Raspberry bushy dwarf virus (isolate
Query: 1 DNSRYTHFLT 10
DN R+TH LT
Sbjct: 256 DNERHTHRLT 265
>sp|PG108_MONPV|ENVELOPE protein OPG108|Monkeypox virus (MPXV)
Query: 1 DNSRYTHFLT 10
D+ +YTHF +
Sbjct: 74 DDDKYTHFFS 83
>sp|RDRP_MYRV9|RNA-DIRECTED RNA polymerase VP1|Cryphonectria parasitica mycoreovirus 1
Query: 3 SRYTHFL 9
SRYTHF+
Sbjct: 5 SRYTHFV 11
>sp|Y123_OSHVF|UNCHARACTERIZED protein ORF123|Ostreid herpesvirus 1 (isolate France)
Query: 1 DNSRYTHFL 9
DN+++ HFL
Sbjct: 208 DNAKFGHFL 216
>sp|RDRP_BPGA|RNA-DIRECTED RNA polymerase beta chain|Enterobacteria phage GA (Bacteriophage
Query: 1 DNSRYTHFL 9
+N RY H+L
Sbjct: 483 ENGRYVHWL 491
>sp|POL_CERV|ENZYMATIC polyprotein|Carnation etched ring virus (CERV)
Query: 1 DNSRYTHFL 9
DN +THF+
Sbjct: 601 DNKNFTHFV 609
>sp|CRMB_CAMPS|SOLUBLE TNF receptor II|Camelpox virus (strain CMS)
Query: 2 NSRYTHFL 9
NS+ THFL
Sbjct: 342 NSKPTHFL 349
>sp|CRMB_CAMPM|SOLUBLE TNF receptor II|Camelpox virus (strain M-96)
Query: 2 NSRYTHFL 9
NS+ THFL
Sbjct: 342 NSKPTHFL 349
>sp|POL_FMVD|ENZYMATIC polyprotein|Figwort mosaic virus (strain DxS)
Query: 1 DNSRYTHFL 9
DN +T+FL
Sbjct: 611 DNKNFTYFL 619
>sp|SPIKE_BCHK3|SPIKE glycoprotein|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 1 DNSRYTHF 8
D+ RYT+F
Sbjct: 75 DSDRYTYF 82
>sp|POLG_TMEVG|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain
Query: 1 DNSRYTHF 8
DN RY +F
Sbjct: 474 DNKRYPYF 481
>sp|PG108_VACCC|ENVELOPE protein H3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DNSRYTHFLT 10
++ +YTHF +
Sbjct: 74 NDDKYTHFFS 83
7|Sequence|31|40|THFLTQHYDA
>sp|RDRP_TMOB|REPLICASE large subunit|Tobamovirus Ob
Query: 1 THFLTQHYDA 10
THFL Q YD
Sbjct: 973 THFLNQCYDG 982
>sp|VF201_IIV3|PUTATIVE Bro-N domain-containing protein 019R|Invertebrate iridescent virus
Query: 3 FLTQHYDA 10
F+ QHYDA
Sbjct: 281 FIVQHYDA 288
>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)
Query: 2 HFLTQHYDA 10
H+LT YDA
Sbjct: 1252 HYLTNMYDA 1260
>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)
Query: 2 HFLTQHYDA 10
H+LT YDA
Sbjct: 1252 HYLTNMYDA 1260
>sp|RDRP_TOMS1|REPLICASE large subunit|Tomato mosaic virus (strain S-1)
Query: 1 THFLTQHYDA 10
THFL Q Y+
Sbjct: 974 THFLNQRYEG 983
>sp|RDRP_TOML|REPLICASE large subunit|Tomato mosaic virus (strain L)
Query: 1 THFLTQHYDA 10
THFL Q Y+
Sbjct: 974 THFLNQRYEG 983
>sp|RDRP_TOMK1|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh
Query: 1 THFLTQHYDA 10
THFL Q Y+
Sbjct: 974 THFLNQRYEG 983
>sp|RDRP_TOMK2|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh
Query: 1 THFLTQHYDA 10
THFL Q Y+
Sbjct: 974 THFLNQRYEG 983
>sp|BXD_CBDP|BOTULINUM neurotoxin type D|Clostridium botulinum D phage (Clostridium
Query: 1 THFLTQHY 8
TH+ ++HY
Sbjct: 373 THYFSRHY 380
>sp|VF179_IIV3|UNCHARACTERIZED protein 035R|Invertebrate iridescent virus 3 (IIV-3)
Query: 3 FLTQHY 8
FLTQHY
Sbjct: 971 FLTQHY 976
>sp|RDRP_YOMV|REPLICASE large subunit|Youcai mosaic virus (YoMV)
Query: 1 THFLTQHYDA 10
T+FL Q YD
Sbjct: 961 TYFLNQKYDG 970
>sp|VINT_SSV1|INTEGRASE spindle-shape virus 1 (SSV1)
Query: 1 THFLTQHY 8
T LTQHY
Sbjct: 307 TRVLTQHY 314
>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain
Query: 2 HFLTQHYDA 10
H++T YDA
Sbjct: 1239 HYVTNFYDA 1247
>sp|RDRP_ORSVS|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Singapore
Query: 1 THFLTQHYDA 10
THF+ YD
Sbjct: 964 THFMNSKYDG 973
>sp|RDRP_ORSVC|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Korean
Query: 1 THFLTQHYDA 10
THF+ YD
Sbjct: 964 THFMNSKYDG 973
>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 1 THFLTQH 7
THF T+H
Sbjct: 2286 THFCTKH 2292
>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain
Query: 2 HFLTQHYDA 10
H++T YDA
Sbjct: 1239 HYVTNFYDA 1247
>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 1 THFLTQH 7
THF T+H
Sbjct: 2286 THFCTKH 2292
>sp|OE66_NPVAC|NON-SULFATED chondroitin lyase E66|Autographa californica nuclear polyhedrosis
Query: 5 TQHYD 9
TQHYD
Sbjct: 203 TQHYD 207
>sp|DPO13_BPK64|DEPOLYMERASE, capsule K21-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)
Query: 1 THFLTQH 7
THF T H
Sbjct: 337 THFTTDH 343
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 2 HFLTQHYDA 10
HF HY A
Sbjct: 310 HFYPDHYQA 318
8|Sequence|36|45|QHYDAKPQGR
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 HYDAKPQGR 10
H+D +P GR
Sbjct: 1085 HWDNRPGGR 1093
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 HYDAKPQGR 10
H+D +P GR
Sbjct: 1080 HWDNRPGGR 1088
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 HYDAKPQGR 10
H+D +P GR
Sbjct: 1081 HWDNRPGGR 1089
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 HYDAKPQGR 10
H+D +P GR
Sbjct: 1081 HWDNRPGGR 1089
>sp|DPOL_ASFK5|DNA polymerase beta|African swine fever virus (isolate
Query: 1 QHYDAKPQG 9
QHY +P+G
Sbjct: 169 QHYSYEPRG 177
>sp|DPOL_ASFB7|DNA polymerase beta|African swine fever virus (strain
Query: 1 QHYDAKPQG 9
QHY +P+G
Sbjct: 173 QHYSYEPRG 181
>sp|DPOL_ASFL6|DNA polymerase beta|African swine fever virus (isolate
Query: 1 QHYDAKPQG 9
QHY +P+G
Sbjct: 169 QHYSYEPRG 177
>sp|DPOL_ASFWA|DNA polymerase beta|African swine fever virus (isolate
Query: 1 QHYDAKPQG 9
QHY +P G
Sbjct: 169 QHYSYEPHG 177
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 HYDAKPQGR 10
H+D +P GR
Sbjct: 463 HHDPQPVGR 471
>sp|DPOL_ASFP4|DNA polymerase beta|African swine fever virus (isolate
Query: 1 QHYDAKPQG 9
QHY +P G
Sbjct: 169 QHYSYEPHG 177
>sp|089R_FRG3G|UNCHARACTERIZED protein 89R|Frog virus 3 (isolate Goorha)
Query: 1 QHYDAKPQG 9
Q DAKPQG
Sbjct: 225 QPEDAKPQG 233
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 3 YDAKPQGR 10
YD P+GR
Sbjct: 214 YDTNPRGR 221
>sp|CAPSD_SSVN|CAPSID protein|Sugarcane streak virus (isolate South
Query: 3 YDAKPQG 9
YDA+P G
Sbjct: 117 YDAQPSG 123
9|Sequence|41|50|KPQGRDDRYC
>sp|YL783_MIMIV|PUTATIVE BTB/POZ domain and WD-repeat|Acanthamoeba polyphaga mimivirus
Query: 4 GRDDRYC 10
GRDDR C
Sbjct: 335 GRDDRIC 341
>sp|VEF_GVHA|VIRAL-ENHANCING factor|Heliothis armigera granulosis virus (HaGV)
Query: 2 PQGRDDRY 9
P+G+D RY
Sbjct: 504 PRGKDKRY 511
>sp|VF268_IIV6|UNCHARACTERIZED protein 268L|Invertebrate iridescent virus 6 (IIV-6)
Query: 1 KPQGRDDR 8
KP GRDD+
Sbjct: 538 KPTGRDDK 545
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 3 QGRDDRYC 10
+GRD+ YC
Sbjct: 285 KGRDNNYC 292
>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13
Query: 3 QGRDDRYC 10
+GRD+ YC
Sbjct: 284 KGRDNSYC 291
>sp|PORTL_BPSP1|PROBABLE portal protein|Bacillus phage SP01 (Bacteriophage SP01)
Query: 2 PQGRDDRY 9
P G DDRY
Sbjct: 497 PDGLDDRY 504
>sp|VP3_LDCPR|PUTATIVE structural protein VP3|Lymantria dispar cypovirus 1 (isolate
Query: 2 PQGRDD 7
P+GRDD
Sbjct: 202 PRGRDD 207
>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)
Query: 5 RDDRYC 10
RDD++C
Sbjct: 1193 RDDKFC 1198
>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 5 RDDRYC 10
RDD++C
Sbjct: 1245 RDDKFC 1250
>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)
Query: 5 RDDRYC 10
RDD++C
Sbjct: 1246 RDDKFC 1251
>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)
Query: 5 RDDRYC 10
RDD++C
Sbjct: 1193 RDDKFC 1198
>sp|VE8E2_HPV13|PROTEIN E8^E2C|Human papillomavirus 13
Query: 3 QGRDDRYC 10
+GRD+ YC
Sbjct: 94 KGRDNSYC 101
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 5 RDDRYC 10
RDD++C
Sbjct: 1245 RDDKFC 1250
>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)
Query: 5 RDDRYC 10
RDD++C
Sbjct: 1246 RDDKFC 1251
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 3 QGRDDRYC 10
+GRD+ +C
Sbjct: 285 KGRDNNFC 292
10|Sequence|46|55|DDRYCESIMR
>sp|POL1_BBWVS|RNA1 polyprotein|Broad bean wilt virus 1
Query: 2 DRYCESI 8
DR CESI
Sbjct: 1241 DRVCESI 1247
>sp|POL1_SDVS5|RNA1 polyprotein|Satsuma dwarf virus (isolate Satsuma
Query: 2 DRYCES 7
+RYCES
Sbjct: 842 NRYCES 847
>sp|DPOL_SFAVA|DNA polymerase|Spodoptera frugiperda ascovirus 1a (SfAV-1a)
Query: 1 DDRYCESIMR 10
DDRY ES R
Sbjct: 652 DDRYAESTCR 661
>sp|MVP1_BYVU|MOVEMENT protein Hsp70h|Beet yellows virus (isolate Ukraine)
Query: 3 RYCESIM 9
+YCESI+
Sbjct: 398 KYCESIV 404
>sp|L_TIBVC|RNA-DIRECTED RNA polymerase L|Tibrogargan virus (strain CS132) (TIBV)
Query: 1 DDRYCESI 8
DD YC+++
Sbjct: 397 DDNYCQAL 404
>sp|VP2_AHSV|OUTER capsid protein VP2|African horse sickness virus (AHSV)
Query: 2 DRYCESI 8
DRYC+S+
Sbjct: 306 DRYCDSL 312
>sp|RP132_FOWPN|DNA-DIRECTED RNA polymerase 132 kDa|Fowlpox virus (strain NVSL) (FPV)
Query: 1 DDRYCESIM 9
++ YCESI+
Sbjct: 979 NEVYCESIL 987
11|Sequence|51|60|ESIMRRRGLT
>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)
Query: 1 ESIMRRRGLT 10
ES++R RGLT
Sbjct: 189 ESLLRVRGLT 198
>sp|PIF2_NPVAC|PER os infectivity factor 2|Autographa californica nuclear
Query: 1 ESIMRRR 7
ES+MRRR
Sbjct: 47 ESVMRRR 53
>sp|R1A_WBV24|REPLICASE polyprotein 1a|White bream virus (isolate Blicca
Query: 1 ESIMRRRGLT 10
+S+MRR+ LT
Sbjct: 363 QSVMRRQPLT 372
>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca
Query: 1 ESIMRRRGLT 10
+S+MRR+ LT
Sbjct: 363 QSVMRRQPLT 372
>sp|NS2A_CVMJH|NON-STRUCTURAL protein 2a|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 3 IMRRRGLT 10
I+RRRG T
Sbjct: 113 ILRRRGCT 120
>sp|NS2A_CVMA5|NON-STRUCTURAL protein 2a|Murine coronavirus (strain A59) (MHV-A59)
Query: 3 IMRRRGLT 10
I+RRRG T
Sbjct: 109 ILRRRGCT 116
>sp|FUS_MPV15|FUSION glycoprotein F0|Murine pneumonia virus (strain 15)
Query: 1 ESIMRRRGL 9
++IMRR GL
Sbjct: 243 KAIMRRNGL 251
>sp|ESTE_HVAVE|PUTATIVE esterase|Heliothis virescens ascovirus 3e (HvAV-3e)
Query: 1 ESIMRRRGLT 10
ES++RR +T
Sbjct: 82 ESVLRRHNIT 91
12|Sequence|56|65|RRGLTSPCKD
>sp|UL62_HCMVA|UNCHARACTERIZED protein UL62|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RGLTSPCKD 10
RGL PC+D
Sbjct: 149 RGLLGPCRD 157
>sp|CAPSD_BPMU|MAJOR capsid protein|Escherichia phage Mu (Bacteriophage Mu)
Query: 1 RRGLTSPCKD 10
+ G T PC D
Sbjct: 122 KDGFTQPCYD 131
>sp|YL484_MIMIV|PUTATIVE ankyrin repeat protein L484|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 RGLTSPCK 9
RGLT+P K
Sbjct: 268 RGLTNPLK 275
>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)
Query: 1 RRGLTSPCKD 10
RRG CKD
Sbjct: 1940 RRGRVGRCKD 1949
>sp|S10_DPIRV|UNCHARACTERIZED protein S10|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)
Query: 4 LTSPCKD 10
LTS CKD
Sbjct: 178 LTSKCKD 184
13|Sequence|61|70|SPCKDINTFI
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SPCKDINTF 9
+PCKD+ +
Sbjct: 75 APCKDVKIY 83
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SPCKDINTF 9
+PCKD+ +
Sbjct: 75 APCKDVKIY 83
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SPCKDINTF 9
+PCKD+ +
Sbjct: 75 APCKDVKIY 83
>sp|LTP_SHV21|LARGE tegument protein deneddylase|Saimiriine herpesvirus 2 (strain 11)
Query: 1 SPCKDINTFI 10
+P +D+ TFI
Sbjct: 1027 TPSRDVKTFI 1036
>sp|HELIC_BPT7|DNA helicase/primase|Escherichia phage T7 (Bacteriophage T7)
Query: 2 PCKDIN 7
PCKD N
Sbjct: 234 PCKDAN 239
>sp|HELIC_BPT3|DNA helicase/primase|Enterobacteria phage T3 (Bacteriophage T3)
Query: 2 PCKDIN 7
PCKD N
Sbjct: 233 PCKDAN 238
>sp|SPIKE_IBVU2|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SPCKDIN 7
+PC+D+N
Sbjct: 472 NPCEDVN 478
>sp|SPIKE_IBVU3|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SPCKDIN 7
+PC+D+N
Sbjct: 472 NPCEDVN 478
>sp|SPIKE_IBVU1|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SPCKDIN 7
+PC+D+N
Sbjct: 472 NPCEDVN 478
>sp|SPIKE_IBVB|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SPCKDIN 7
+PC+D+N
Sbjct: 489 NPCEDVN 495
>sp|SPIKE_IBV6|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SPCKDIN 7
+PC+D+N
Sbjct: 490 NPCEDVN 496
>sp|SPIKE_IBVD2|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SPCKDIN 7
+PC+D+N
Sbjct: 490 NPCEDVN 496
>sp|SPIKE_IBVK|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SPCKDIN 7
+PC+D+N
Sbjct: 489 NPCEDVN 495
>sp|SPIKE_IBVD3|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SPCKDIN 7
+PC+D+N
Sbjct: 490 NPCEDVN 496
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 1 SPCKDIN 7
S CKDIN
Sbjct: 620 SSCKDIN 626
>sp|SPIKE_IBVM|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SPCKDIN 7
+PC+D+N
Sbjct: 489 NPCEDVN 495
>sp|VP43_NPVAC|43 kDa protein|Autographa californica nuclear polyhedrosis virus
Query: 3 CKDINTFI 10
CKDIN I
Sbjct: 215 CKDINVAI 222
14|Sequence|66|75|INTFIHGNKR
>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)
Query: 1 INTFIHGNK 9
IN ++HG+K
Sbjct: 284 INAYVHGHK 292
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 INTFIHGNK 9
I T +HGNK
Sbjct: 612 IETLVHGNK 620
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 4 FIHGNKR 10
F+HGN R
Sbjct: 134 FLHGNPR 140
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 4 FIHGNKR 10
F+HGN R
Sbjct: 134 FLHGNPR 140
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 INTFIHG 7
IN+++HG
Sbjct: 289 INSYVHG 295
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 INTFIHGNKR 10
+ IHGN+R
Sbjct: 646 LEAVIHGNER 655
>sp|SPIKE_BCHK3|SPIKE glycoprotein|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 2 NTFIHGN 8
NTF+ GN
Sbjct: 1088 NTFVSGN 1094
>sp|PP220_ASFK5|POLYPROTEIN pp220|African swine fever virus (isolate
Query: 1 INTFIHGN 8
INTF +GN
Sbjct: 1573 INTFANGN 1580
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 NTFIHGN 8
NTF+ GN
Sbjct: 1101 NTFVSGN 1107
>sp|VP2_AHSV4|OUTER capsid protein VP2|African horse sickness virus 4
Query: 1 INTFIHGNKR 10
+ TF+H K+
Sbjct: 314 LTTFVHAKKK 323
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 NTFIHGN 8
NTF+ GN
Sbjct: 1119 NTFVSGN 1125
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 INTFIHGNK 9
I IHGNK
Sbjct: 612 IELLIHGNK 620
15|Sequence|71|80|HGNKRSIKAI
>sp|VE7_HPV2A|PROTEIN E7|Human papillomavirus type 2a
Query: 1 HGNKRSIKAI 10
HGN+ S+K I
Sbjct: 2 HGNRPSLKDI 11
16|Sequence|76|85|SIKAICENKN
>sp|VF268_IIV3|UNCHARACTERIZED protein 074L|Invertebrate iridescent virus 3 (IIV-3)
Query: 2 IKAICENKN 10
IK +C+N+N
Sbjct: 632 IKTVCKNRN 640
>sp|5057R_ASFWA|PROTEIN MGF 505-7R|African swine fever virus (isolate
Query: 2 IKAICEN 8
IKAICE+
Sbjct: 393 IKAICED 399
>sp|5057R_ASFP4|PROTEIN MGF 505-7R|African swine fever virus (isolate
Query: 2 IKAICEN 8
IKAICE+
Sbjct: 393 IKAICED 399
17|Sequence|81|90|CENKNGNPHR
>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)
Query: 1 CENKNGNPH 9
CEN G PH
Sbjct: 1312 CENVEGPPH 1320
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 CENKNGNPH 9
CEN NG H
Sbjct: 229 CENDNGTLH 237
>sp|YL143_MIMIV|UNCHARACTERIZED protein L143|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 CENKNGNPH 9
CE N NPH
Sbjct: 43 CETINYNPH 51
>sp|TRM1_ELHVK|TRIPARTITE terminase subunit 1|Elephantid herpesvirus 1 (isolate Asian
Query: 1 CENKNGNPHR 10
C+N N PHR
Sbjct: 571 CDNANVLPHR 580
>sp|RDRP_WCCVB|RNA-DIRECTED RNA polymerase|White clover cryptic virus 1
Query: 3 NKNGNPHR 10
N NG PHR
Sbjct: 490 NHNGLPHR 497
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 1 CENKNGNP 8
C N +GNP
Sbjct: 204 CNNNSGNP 211
>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)
Query: 1 CENKNGN 7
CE KNGN
Sbjct: 110 CEEKNGN 116
>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)
Query: 1 CENKNGN 7
CE KNGN
Sbjct: 110 CEEKNGN 116
>sp|PG190_VACCL|PROTEIN OPG190|Vaccinia virus (strain Lister) (VACV)
Query: 1 CENKNGN 7
CE KNGN
Sbjct: 110 CEEKNGN 116
>sp|SEMA_VACCW|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Western Reserve)
Query: 1 CENKNGNP 8
C NGNP
Sbjct: 117 CGTNNGNP 124
>sp|ENV_FENV1|ENVELOPE glycoprotein|Feline endogenous virus ECE1
Query: 4 KNGNPHR 10
K GNPH+
Sbjct: 26 KEGNPHQ 32
>sp|PG190_VACCT|PROTEIN OPG190|Vaccinia virus (strain Tian Tan)
Query: 1 CENKNGN 7
CE KNGN
Sbjct: 110 CEEKNGN 116
>sp|PG190_VACCW|PROTEIN OPG190|Vaccinia virus (strain Western Reserve)
Query: 1 CENKNGN 7
CE KNGN
Sbjct: 110 CEEKNGN 116
>sp|NS1AB_TASV2|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 2 (TAstV-2)
Query: 1 CENKNGNP 8
C+ K GNP
Sbjct: 1444 CQVKKGNP 1451
>sp|PG190_VACCC|PROTEIN OPG190|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CENKNGN 7
CE KNGN
Sbjct: 110 CEEKNGN 116
>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CENKNGN 7
CE KNGN
Sbjct: 110 CEEKNGN 116
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CENKNGNP 8
C NGNP
Sbjct: 79 CGTNNGNP 86
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 CENKNG 6
CEN NG
Sbjct: 229 CENDNG 234
>sp|SEMA_ECTVM|SEMAPHORIN-LIKE protein 139|Ectromelia virus (strain Moscow) (ECTV)
Query: 1 CENKNGNP 8
C NGNP
Sbjct: 76 CGTNNGNP 83
>sp|3BHS_MONPV|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Monkeypox
Query: 3 NKNGNP 8
NK+GNP
Sbjct: 125 NKHGNP 130
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 1 CENKNGNP 8
CEN G+P
Sbjct: 202 CENVEGDP 209
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 2 ENKNGNP 8
E +NGNP
Sbjct: 641 EEENGNP 647
>sp|S2_DPIRV|UNCHARACTERIZED protein S2|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)
Query: 4 KNGNPH 9
KN NPH
Sbjct: 392 KNDNPH 397
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 KNGNPH 9
K GNPH
Sbjct: 307 KTGNPH 312
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 3 NKNGNP 8
+KNGNP
Sbjct: 588 DKNGNP 593
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 4 KNGNPH 9
K GNPH
Sbjct: 307 KTGNPH 312
>sp|PG117_VACCW|UNCOATING factor OPG117|Vaccinia virus (strain Western Reserve)
Query: 4 KNGNPH 9
K GNPH
Sbjct: 307 KTGNPH 312
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 4 KNGNPH 9
K GNPH
Sbjct: 307 KTGNPH 312
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 KNGNPH 9
K GNPH
Sbjct: 307 KTGNPH 312
>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)
Query: 1 CENKNGNPH 9
CE G PH
Sbjct: 1312 CEKVEGPPH 1320
>sp|GAG_OMVVS|GAG polyprotein|Ovine maedi visna related virus
Query: 1 CENKNGNP 8
C K GNP
Sbjct: 418 CRQKKGNP 425
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 3 NKNGNP 8
+KNGNP
Sbjct: 588 DKNGNP 593
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 3 NKNGNP 8
+KNGNP
Sbjct: 581 DKNGNP 586
>sp|UB222_WSSVS|RING finger containing E3 ubiquitin-protein|White spot syndrome virus
Query: 5 NGNPHR 10
N NPHR
Sbjct: 515 NDNPHR 520
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 3 NKNGNP 8
+KNGNP
Sbjct: 602 DKNGNP 607
18|Sequence|86|95|GNPHRENLRI
>sp|YL098_MIMIV|PUTATIVE BTB/POZ domain-containing protein L98|Acanthamoeba polyphaga
Query: 1 GNPHRENLRI 10
G PH +LRI
Sbjct: 287 GQPHVHSLRI 296
>sp|Y077_AFV1Y|UNCHARACTERIZED protein ORF77|Acidianus filamentous virus 1 (isolate
Query: 2 NPHRENLRI 10
NP RE LR+
Sbjct: 67 NPFREALRL 75
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GNPHREN 7
GNPH E+
Sbjct: 577 GNPHNES 583
>sp|REP9_FBNC9|PARA-REP C9|Faba bean necrotic yellows C9
Query: 1 GNPHRENLR 9
GNPH E ++
Sbjct: 61 GNPHLEKMK 69
19|Sequence|91|100|ENLRISKSSF
***** No hits found ******
20|Sequence|96|105|SKSSFQVTTC
>sp|ESTE_SFAVA|PUTATIVE esterase|Spodoptera frugiperda ascovirus 1a (SfAV-1a)
Query: 1 SKSSFQVTTC 10
SKSSF T C
Sbjct: 135 SKSSFGFTDC 144
>sp|VF335_IIV6|UNCHARACTERIZED protein 335L|Invertebrate iridescent virus 6 (IIV-6)
Query: 2 KSSFQVTTC 10
K SFQ+T C
Sbjct: 148 KGSFQLTGC 156
>sp|YR348_MIMIV|UNCHARACTERIZED protein R348|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 SKSSFQVTTC 10
S S+Q++TC
Sbjct: 665 SDISYQISTC 674
21|Sequence|101|110|QVTTCKLHGG
>sp|YR819_MIMIV|UNCHARACTERIZED protein R819|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 QVTTCKLHG 9
+ T CKLHG
Sbjct: 28 EFTECKLHG 36
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 QVTTCKLH 8
QVTTC+L+
Sbjct: 1342 QVTTCELY 1349
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 QVTTCKLH 8
QVTTC+L+
Sbjct: 1342 QVTTCELY 1349
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 QVTTCKLH 8
QVTTC+L+
Sbjct: 1342 QVTTCELY 1349
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 QVTTCKLH 8
QVTTC+L+
Sbjct: 1342 QVTTCELY 1349
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 QVTTCKLH 8
QVTTC+L+
Sbjct: 1342 QVTTCELY 1349
>sp|RDRP_PVXX3|RNA replication protein|Potato virus X (strain X3)
Query: 1 QVTTCKLHGG 10
+V TC +HG
Sbjct: 727 KVATCVIHGA 736
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 1 QVTTCKLHG 9
QVTT +HG
Sbjct: 167 QVTTVDVHG 175
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 1 QVTTCKLHG 9
QVTT +HG
Sbjct: 167 QVTTVDVHG 175
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 1 QVTTCKLHGG 10
QVTT HGG
Sbjct: 148 QVTTNGEHGG 157
>sp|SPIKE_IBVK|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 2 VTTCKLHGG 10
VT C HGG
Sbjct: 111 VTHCYKHGG 119
>sp|SPIKE_IBVB|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 2 VTTCKLHGG 10
VT C HGG
Sbjct: 111 VTHCYKHGG 119
>sp|L_BCNVU|RNA-DIRECTED RNA polymerase L|Bear Canyon mammarenavirus (isolate Mouse/United
Query: 1 QVTTCKLHG 9
++ +CK HG
Sbjct: 51 EIDSCKKHG 59
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 QVTTCKLHGG 10
Q+ CK +GG
Sbjct: 890 QLAACKSNGG 899
>sp|ATI4_VACCW|27 kDa A-type inclusion protein|Vaccinia virus (strain Western
Query: 1 QVTTCKLHGG 10
Q+ CK +GG
Sbjct: 172 QLAACKSNGG 181
22|Sequence|106|115|KLHGGSPWPP
>sp|L_BEFVB|RNA-DIRECTED RNA polymerase L|Bovine ephemeral fever virus (strain
Query: 2 LHGGSPWPP 10
LHG P PP
Sbjct: 1749 LHGTRPSPP 1757
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 LHGGSPWP 9
+H G+ WP
Sbjct: 6061 MHKGAAWP 6068
>sp|Y189_ATV|PUTATIVE zinc finger protein ORF189|Acidianus two-tailed virus (ATV)
Query: 3 HGGSPWPP 10
H G PW P
Sbjct: 137 HNGFPWCP 144
>sp|PRIM_GAHVM|DNA primase|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 1 KLHGGSPW 8
++ GG+PW
Sbjct: 715 RVMGGAPW 722
>sp|YO01_BPL2|UNCHARACTERIZED 66.6 kDa protein|Acholeplasma phage L2 (Bacteriophage L2)
Query: 2 LHGGSPW 8
+ GGSPW
Sbjct: 409 IKGGSPW 415
>sp|NS1_I34A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fowl
Query: 3 HGGSPWPP 10
+GG P PP
Sbjct: 209 NGGPPLPP 216
>sp|NS1_I78A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/Alberta/827/1978
Query: 3 HGGSPWPP 10
+GG P PP
Sbjct: 209 NGGPPLPP 216
>sp|NS1_I76A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/Alberta/88/1976
Query: 3 HGGSPWPP 10
+GG P PP
Sbjct: 209 NGGPPLPP 216
>sp|NS1_I76A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Alberta/60/1976
Query: 3 HGGSPWPP 10
+GG P PP
Sbjct: 209 NGGPPLPP 216
>sp|NS1_I71A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Turkey/Oregon/1971
Query: 3 HGGSPWPP 10
+GG P PP
Sbjct: 209 NGGPPLPP 216
>sp|NS1_I79A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Pintail/Alberta/358/1979
Query: 3 HGGSPWPP 10
+GG P PP
Sbjct: 209 NGGPPLPP 216
>sp|NS1_I63A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Turkey/Canada/1963
Query: 3 HGGSPWPP 10
+GG P PP
Sbjct: 209 NGGPPLPP 216
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 LHGGSPWPP 10
L G SP PP
Sbjct: 1702 LRGSSPEPP 1710
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 LHGGSPWPP 10
L G SP PP
Sbjct: 1702 LRGSSPEPP 1710
>sp|SPIN_HAEPV|SPINDOLIN armigera entomopoxvirus (HaEPV)
Query: 2 LHGGSPWPP 10
+ GG WPP
Sbjct: 36 VRGGQWWPP 44
>sp|RDRP_NODAM|RNA-DIRECTED RNA polymerase|Nodamura virus (strain Mag115) (NoV)
Query: 1 KLHGGSPWP 9
K+H PWP
Sbjct: 267 KVHYCRPWP 275
>sp|RDRP_LOLV|RNA-DIRECTED RNA polymerase|Lolium latent virus (isolate Lolium/USA/US1/-)
Query: 3 HGGSPWPP 10
HGG W P
Sbjct: 207 HGGFQWAP 214
>sp|POL1_SDVS5|RNA1 polyprotein|Satsuma dwarf virus (isolate Satsuma
Query: 1 KLHGGSP 7
++HGG+P
Sbjct: 1739 EIHGGTP 1745
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 HGGSPWPP 10
HG WPP
Sbjct: 1369 HGKRSWPP 1376
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LHGGSPWPP 10
++G SPW P
Sbjct: 621 VNGNSPWAP 629
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 2 LHGGSPWPP 10
++G SPW P
Sbjct: 620 VNGNSPWAP 628
23|Sequence|111|120|SPWPPCQYRA
>sp|TRM3_ELHVK|TRIPARTITE terminase subunit 3|Elephantid herpesvirus 1 (isolate Asian
Query: 1 SPWPPCQYR 9
+PWP C+ R
Sbjct: 100 TPWPECRTR 108
>sp|L_SENDZ|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Z) (SeV)
Query: 3 WPPCQY 8
WPPC +
Sbjct: 416 WPPCDF 421
>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)
Query: 3 WPPCQY 8
WPPC +
Sbjct: 416 WPPCDF 421
>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)
Query: 3 WPPCQY 8
WPPC +
Sbjct: 416 WPPCDF 421
>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)
Query: 3 WPPCQY 8
WPPC +
Sbjct: 416 WPPCDF 421
>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)
Query: 3 WPPCQY 8
WPPC +
Sbjct: 416 WPPCDF 421
>sp|LTP_GAHVM|LARGE tegument protein deneddylase|Gallid herpesvirus 2 (strain
Query: 1 SPWPPC 6
S WPPC
Sbjct: 3164 SFWPPC 3169
>sp|RUSA_BP82|CROSSOVER junction endodeoxyribonuclease rusA|Enterobacteria phage 82
Query: 2 PWPPCQYR 9
PWPP R
Sbjct: 9 PWPPSNNR 16
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 3 WPPCQ 7
WPPCQ
Sbjct: 28 WPPCQ 32
>sp|CAPSD_SSVN|CAPSID protein|Sugarcane streak virus (isolate South
Query: 1 SPWPPCQ 7
S WPPC+
Sbjct: 180 SCWPPCR 186
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 WPPCQY 8
WP C Y
Sbjct: 1221 WPTCTY 1226
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 1 SPWPPCQYRA 10
+PWP CQ A
Sbjct: 57 TPWPLCQDHA 66
>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)
Query: 3 WPPCQY 8
+PPC Y
Sbjct: 196 FPPCMY 201
>sp|TSIS_WMSV|PDGF-RELATED-TRANSFORMING protein sis|Woolly monkey sarcoma virus (WMSV)
Query: 3 WPPC 6
WPPC
Sbjct: 106 WPPC 109
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain
Query: 2 PWPPC 6
PWPPC
Sbjct: 59 PWPPC 63
>sp|VG50_BPMD2|PUTATIVE adenosylcobalamin-dependent ribonucleoside-triphosphate
Query: 2 PWPPC 6
PW PC
Sbjct: 382 PWEPC 386
>sp|CAPSD_MSVPA|CAPSID protein|Maize streak virus genotype E
Query: 3 WPPCQ 7
WPPC+
Sbjct: 178 WPPCK 182
>sp|VG50_BPML5|PUTATIVE adenosylcobalamin-dependent ribonucleoside-triphosphate
Query: 2 PWPPC 6
PW PC
Sbjct: 377 PWEPC 381
>sp|CAPSD_MSVSE|CAPSID protein|Maize streak virus genotype C
Query: 3 WPPCQ 7
WPPC+
Sbjct: 178 WPPCK 182
>sp|CAPSD_MSVRA|CAPSID protein|Maize streak virus genotype D
Query: 3 WPPCQ 7
WPPC+
Sbjct: 178 WPPCK 182
>sp|VG50_BPMB2|PUTATIVE adenosylcobalamin-dependent ribonucleoside-triphosphate
Query: 2 PWPPC 6
PW PC
Sbjct: 363 PWEPC 367
>sp|AN_SHV21|SHUTOFF alkaline exonuclease|Saimiriine herpesvirus 2 (strain 11)
Query: 2 PWPPC 6
PW PC
Sbjct: 469 PWAPC 473
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 PWPPCQYRA 10
P P C Y+A
Sbjct: 1186 PGPQCTYKA 1194
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 PWPPCQYRA 10
P P C Y+A
Sbjct: 1186 PGPQCTYKA 1194
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 WPPCQY 8
WP C Y
Sbjct: 1365 WPSCTY 1370
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 PWPPCQYRA 10
P P C Y+A
Sbjct: 1186 PSPQCTYKA 1194
>sp|GP_HAZVJ|ENVELOPMENT polyprotein|Hazara virus (isolate JC280)
Query: 3 WPPCQY 8
WP C Y
Sbjct: 1101 WPSCTY 1106
>sp|POL_FLV|GAG-POL polyprotein|Feline leukemia virus
Query: 1 SPWPPC 6
S WPPC
Sbjct: 1030 SGWPPC 1035
>sp|BLLF2_EBVG|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PWPPCQYR 9
P PPCQ R
Sbjct: 129 PKPPCQSR 136
>sp|BLLF2_EBVB9|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PWPPCQYR 9
P PPCQ R
Sbjct: 129 PKPPCQSR 136
24|Sequence|116|125|CQYRATAGFR
>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus
Query: 1 CQYRATAGF 9
C+Y+ AGF
Sbjct: 1653 CKYKGDAGF 1661
>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus
Query: 1 CQYRATAGF 9
C+Y+ AGF
Sbjct: 1684 CKYKCDAGF 1692
>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)
Query: 1 CQYRATAGF 9
C+YR T G
Sbjct: 214 CKYRVTTGL 222
>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)
Query: 1 CQYRATAGF 9
C+Y+ AGF
Sbjct: 1675 CKYKNDAGF 1683
>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)
Query: 1 CQYRATAGF 9
C+Y+ AGF
Sbjct: 1675 CKYKNDAGF 1683
>sp|BRLF1_EHV2|PUTATIVE transcription activator BRLF1 homolog|Equine herpesvirus 2
Query: 2 QYRATAGF 9
QY A AGF
Sbjct: 69 QYNALAGF 76
25|Sequence|121|130|TAGFRNVVVA
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 GFRNVVV 9
GFRN+V+
Sbjct: 331 GFRNMVI 337
>sp|PG153_VACCW|ENVELOP protein OPG153|Vaccinia virus (strain Western Reserve)
Query: 3 GFRNVVV 9
GFRN+V+
Sbjct: 331 GFRNMVI 337
26|Sequence|126|135|NVVVACENGL
>sp|TOPL_BPT4|DNA topoisomerase large subunit|Enterobacteria phage T4 (Bacteriophage
Query: 1 NVVVACENGL 10
N+VV C NG+
Sbjct: 157 NIVVRCSNGM 166
>sp|YR154_MIMIV|PUTATIVE BTB/POZ domain and WD-repeat|Acanthamoeba polyphaga mimivirus
Query: 1 NVVVACENGL 10
+++V C NGL
Sbjct: 375 HILVGCHNGL 384
>sp|DPOL_GPCMV|DNA polymerase|Guinea pig cytomegalovirus (strain 22122)
Query: 2 VVVACENG 9
+VVAC++G
Sbjct: 1090 LVVACDDG 1097
>sp|VP5_FDVS|UNCHARACTERIZED protein VP5|Fiji disease virus (isolate Sugarcane)
Query: 2 VVVACENG 9
+V++C+NG
Sbjct: 615 MVISCKNG 622
27|Sequence|131|140|CENGLPVHLD
>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United
Query: 1 CENGLP 6
CENGLP
Sbjct: 857 CENGLP 862
>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette
Query: 1 CENGLP 6
CENGLP
Sbjct: 857 CENGLP 862
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 NGLPVHL 9
NG+PVHL
Sbjct: 1433 NGVPVHL 1439
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 NGLPVHL 9
NG+PVHL
Sbjct: 1430 NGVPVHL 1436
>sp|RDRP_PZSVT|RNA-DIRECTED RNA polymerase 2a|Pelargonium zonate spot virus (isolate
Query: 1 CENGLPVHL 9
C+ GLP HL
Sbjct: 454 CKIGLPAHL 462
>sp|CAPSD_PAVCN|CAPSID protein VP1|Canine parvovirus type 2 (isolate
Query: 2 ENGLPVHL 9
EN +PVHL
Sbjct: 390 ENSVPVHL 397
>sp|CAPSD_PAVCD|CAPSID protein VP1|Canine parvovirustype 2 (isolate Dog/United
Query: 2 ENGLPVHL 9
EN +PVHL
Sbjct: 390 ENSVPVHL 397
>sp|CAPSD_PAVCB|CAPSID protein VP1|Canine parvovirus type 2 (isolate
Query: 2 ENGLPVHL 9
EN +PVHL
Sbjct: 390 ENSVPVHL 397
>sp|CAPSD_MEVA|CAPSID protein VP1|Mink enteritis virus (strain Abashiri)
Query: 2 ENGLPVHL 9
EN +PVHL
Sbjct: 385 ENSVPVHL 392
>sp|CAPSD_FPV19|CAPSID protein VP1|Feline panleukopenia virus (strain 193)
Query: 2 ENGLPVHL 9
EN +PVHL
Sbjct: 390 ENSVPVHL 397
>sp|CAPSD_FPV|CAPSID protein VP1|Feline panleukopenia virus (FPV)
Query: 2 ENGLPVHL 9
EN +PVHL
Sbjct: 390 ENSVPVHL 397
>sp|CAPSD_PAVC7|CAPSID protein VP1|Canine parvovirus type 2 (strain
Query: 2 ENGLPVHL 9
EN +PVHL
Sbjct: 390 ENSVPVHL 397
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 ENGLPVHLD 10
E+G+P+H D
Sbjct: 1179 EHGVPIHAD 1187
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 ENGLPVHLD 10
E+G+P+H D
Sbjct: 1179 EHGVPIHAD 1187
>sp|DPOL_RHCM6|DNA polymerase catalytic subunit|Rhesus cytomegalovirus (strain 68-1)
Query: 2 ENGLPVHLD 10
E+G+P+H D
Sbjct: 973 EHGVPIHAD 981
Query: 2 ENGLPVH 8
ENG+PV+
Sbjct: 219 ENGIPVY 225
>sp|CAPSD_PAVC|CAPSID protein VP2|Canine parvovirus type 2 (CPV-2)
Query: 2 ENGLPVHL 9
EN +PVHL
Sbjct: 247 ENSVPVHL 254
>sp|CAPSD_PAVPN|CAPSID protein VP1|Porcine parvovirus (strain NADL-2) (PPV)
Query: 2 ENGLPVHL 9
EN +P+HL
Sbjct: 398 ENAVPIHL 405
>sp|CAPSD_PAVPK|CAPSID protein VP1|Porcine parvovirus (strain Kresse) (PPV)
Query: 2 ENGLPVHL 9
EN +P+HL
Sbjct: 398 ENAVPIHL 405
>sp|CAPSD_PAVP9|CAPSID protein VP1|Porcine parvovirus (strain 90HS) (PPV)
Query: 2 ENGLPVHL 9
EN +P+HL
Sbjct: 398 ENAVPIHL 405
>sp|POL_WDSV|GAG-POL polyprotein|Walleye dermal sarcoma virus (WDSV)
Query: 1 CENGLPVH 8
CEN +P H
Sbjct: 1193 CENNIPPH 1200
>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)
Query: 4 GLPVHL 9
GLPVHL
Sbjct: 1251 GLPVHL 1256
>sp|POLG_PVYHU|GENOME polyprotein|Potato virus Y (strain Hungarian)
Query: 4 GLPVHL 9
GLPVHL
Sbjct: 1251 GLPVHL 1256
>sp|GAM_LAMBD|HOST-NUCLEASE inhibitor protein gam|Escherichia phage lambda (Bacteriophage
Query: 2 ENGLPVHL 9
E GLP HL
Sbjct: 76 EKGLPQHL 83
>sp|RIR1_GAHVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Gallid herpesvirus 2 (strain
Query: 1 CENGLPVHLD 10
CE GLP D
Sbjct: 593 CERGLPPFAD 602
>sp|RDRP_NCBVS|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Nudaurelia capensis beta virus (isolate
Query: 1 CENGLPVHL 9
C+ G P HL
Sbjct: 1099 CDRGCPEHL 1107
>sp|YL410_MIMIV|PUTATIVE core protein L410|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 NGLPVHL 9
NG PVH+
Sbjct: 504 NGYPVHV 510
>sp|CAPSP_BPT4|CAPSID vertex protein|Enterobacteria phage T4 (Bacteriophage T4)
Query: 3 NGLPVHLD 10
NGLP++ D
Sbjct: 308 NGLPLYCD 315
>sp|CAPSP_BPAR1|CAPSID vertex protein|Escherichia phage AR1 (Bacteriophage AR1)
Query: 3 NGLPVHLD 10
NGLP++ D
Sbjct: 308 NGLPLYCD 315
>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)
Query: 1 CENGLPV 7
CEN +P+
Sbjct: 1612 CENDIPI 1618
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 ENGLPVHLD 10
+NG+ VH D
Sbjct: 965 KNGMAVHTD 973
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 ENGLPVHLD 10
+NG+ VH D
Sbjct: 965 KNGMAVHTD 973
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 ENGLPVHLD 10
+NG+ VH D
Sbjct: 965 KNGMAVHTD 973
>sp|RDRP_PSVJ|RNA-DIRECTED RNA polymerase 2a|Peanut stunt virus (strain J)
Query: 1 CENGLPVHL 9
C+ LP H+
Sbjct: 274 CDTSLPTHV 282
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 ENGLPVHLD 10
+NG+ VH D
Sbjct: 965 KNGIAVHTD 973
>sp|TRM1_EHV1B|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain Ab4p)
Query: 1 CENGLPVHLD 10
CE + VHLD
Sbjct: 115 CEYHVRVHLD 124
>sp|TRM1_EHV1|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain HVS25A)
Query: 1 CENGLPVHLD 10
CE + VHLD
Sbjct: 115 CEYHVRVHLD 124
>sp|TRM1_EHV1V|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain V592)
Query: 1 CENGLPVHLD 10
CE + VHLD
Sbjct: 115 CEYHVRVHLD 124
28|Sequence|136|147|PVHLDQSIFRRP
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 VHLDQSIFRR 11
VH DQS++ R
Sbjct: 972 VHTDQSLWMR 981
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 VHLDQSIFRR 11
+H DQS++ R
Sbjct: 970 IHTDQSLWMR 979
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 VHLDQSIFRR 11
+H DQS++ R
Sbjct: 970 IHTDQSLWMR 979
>sp|VF349_IIV3|PUTATIVE transcription elongation factor S-II-like|Invertebrate iridescent
Query: 1 PVHLDQSIFRR 11
P H +Q FRR
Sbjct: 46 PSHSEQDNFRR 56
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 DQSIFRRP 12
D+S FRRP
Sbjct: 189 DESNFRRP 196
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 DQSIFRRP 12
D+S FRRP
Sbjct: 189 DESNFRRP 196
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 DQSIFRRP 12
D+S FRRP
Sbjct: 189 DESNFRRP 196
>sp|PG073_VARV|CORE protein OPG073|Variola virus
Query: 2 VHLDQSIF 9
+H+DQS F
Sbjct: 42 IHIDQSEF 49
>sp|PG073_VAR67|CORE protein OPG073|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 VHLDQSIF 9
+H+DQS F
Sbjct: 42 IHIDQSEF 49
>sp|PG073_VACCW|CORE protein OPG073|Vaccinia virus (strain Western Reserve)
Query: 2 VHLDQSIF 9
+H+DQS F
Sbjct: 42 IHIDQSEF 49
>sp|PG073_VACCC|CORE protein OPG073|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VHLDQSIF 9
+H+DQS F
Sbjct: 42 IHIDQSEF 49
>sp|PG073_MONPV|CORE protein OPG073|Monkeypox virus (MPXV)
Query: 2 VHLDQSIF 9
+H+DQS F
Sbjct: 42 IHIDQSEF 49
>sp|IR05_HCMVA|UNCHARACTERIZED protein IRL5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 HLDQSIFRRP 12
HL S+F RP
Sbjct: 58 HLGSSVFSRP 67
>sp|VL2_HPV6B|MINOR capsid protein L2|Human papillomavirus type 6b
Query: 3 HLDQSIFRRP 12
H SIFR P
Sbjct: 149 HTTTSIFRNP 158
>sp|VL2_HPV6A|MINOR capsid protein L2|Human papillomavirus type 6a
Query: 3 HLDQSIFRRP 12
H SIFR P
Sbjct: 149 HTTTSIFRNP 158
>sp|VL1_BPV3|MAJOR capsid protein L1|Bovine papillomavirus type 3
Query: 2 VHLDQSIFRRP 12
V DQ I+ RP
Sbjct: 301 VSSDQQIYNRP 311