1|SequenceR|10|1|HYPKVQYMPM
>sp|VP6_ROTGI|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Rat/United
Query: 3 PKVQYM 8
PKVQYM
Sbjct: 339 PKVQYM 344
>sp|VP6_ROTGA|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 3 PKVQYM 8
PK QYM
Sbjct: 339 PKAQYM 344
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 PKVQYMPM 10
P V YMP+
Sbjct: 365 PPVDYMPL 372
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 PKVQYMP 9
PK Q++P
Sbjct: 355 PKTQFIP 361
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 YPKVQYMPM 10
YP + Y PM
Sbjct: 4 YPTLNYSPM 12
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 HYPKVQYMPM 10
H+PK + PM
Sbjct: 106 HHPKGRTRPM 115
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 PKVQYMP 9
PK++ MP
Sbjct: 170 PKIRLMP 176
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 PKVQYMP 9
PK++ MP
Sbjct: 170 PKIRLMP 176
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 PKVQYMP 9
PK++ MP
Sbjct: 170 PKIRLMP 176
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 PKVQYMP 9
PK++ MP
Sbjct: 170 PKIRLMP 176
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 PKVQYMP 9
PK++ MP
Sbjct: 170 PKIRLMP 176
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 PKVQYMP 9
PK++ MP
Sbjct: 170 PKIRLMP 176
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 PKVQYMP 9
PK++ MP
Sbjct: 170 PKIRLMP 176
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 3 PKVQY 7
PKVQY
Sbjct: 231 PKVQY 235
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 2 YPKVQYMPM 10
YP QY P+
Sbjct: 369 YPYWQYSPV 377
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 YPKVQYMPM 10
YP QY P+
Sbjct: 369 YPYWQYSPV 377
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 3 PKVQYMPM 10
PK Y P+
Sbjct: 94 PKTSYYPL 101
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 YPKVQYMPM 10
YP + Y PM
Sbjct: 4 YPTLNYPPM 12
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 YPKVQYMPM 10
YP + Y PM
Sbjct: 4 YPTLNYPPM 12
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 YPKVQ 6
YPK+Q
Sbjct: 1098 YPKIQ 1102
2|SequenceR|15|6|PAGGGHYPKV
>sp|NSP5_ROT41|NON-STRUCTURAL protein 5|Rotavirus A (isolate
Query: 4 GGHYPKV 10
G HYPK+
Sbjct: 144 GKHYPKI 150
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PAGGG-HYPKV 10
PA G HYPKV
Sbjct: 104 PATGTVHYPKV 114
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PAGGG-HYPKV 10
PA G HYPKV
Sbjct: 104 PATGTVHYPKV 114
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 1 PAGGGHY 7
P G GHY
Sbjct: 610 PYGNGHY 616
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PAGGGHYP 8
P GG+YP
Sbjct: 124 PPSGGNYP 131
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 6 HYPKV 10
HYPKV
Sbjct: 109 HYPKV 113
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 6 HYPKV 10
HYPKV
Sbjct: 104 HYPKV 108
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 6 HYPKV 10
HYPKV
Sbjct: 102 HYPKV 106
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 6 HYPKV 10
HYPKV
Sbjct: 103 HYPKV 107
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996
Query: 6 HYPKV 10
HYPKV
Sbjct: 110 HYPKV 114
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PAGGGHYP 8
P GG+YP
Sbjct: 124 PPSGGNYP 131
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 4 GGHYPKV 10
GG YPK+
Sbjct: 172 GGSYPKL 178
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 1 PAGGGHY 7
P+G GH+
Sbjct: 173 PSGSGHF 179
>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 PAGGGHYPKV 10
PA G ++P V
Sbjct: 198 PASGAYFPGV 207
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig
Query: 6 HYPKV 10
HYPK+
Sbjct: 110 HYPKI 114
>sp|NSP5_ROTHJ|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 6 HYPKV 10
HYPK+
Sbjct: 146 HYPKI 150
>sp|NSP5_ROTH7|NON-STRUCTURAL protein 5|Rotavirus A (isolate RVA/Human/United
Query: 6 HYPKV 10
HYPK+
Sbjct: 146 HYPKI 150
>sp|NSP5_ROTH3|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 6 HYPKV 10
HYPK+
Sbjct: 146 HYPKI 150
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PAGGGHYP 8
P GGG+ P
Sbjct: 538 PQGGGYIP 545
>sp|GQ2_HHV6Z|GLYCOPROTEIN Q2|Human herpesvirus 6B (strain Z29)
Query: 1 PAGGGHY 7
P G GHY
Sbjct: 176 PYGNGHY 182
>sp|PB2_I82A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Camel/Mongolia/1982
Query: 6 HYPKV 10
HYPK+
Sbjct: 49 HYPKI 53
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 1 PAGGGHY 7
P+G GH+
Sbjct: 173 PSGSGHF 179
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 4 GGHYP 8
GGH+P
Sbjct: 283 GGHHP 287
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 GGGHYPK 9
GGG+Y K
Sbjct: 5048 GGGYYVK 5054
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 6 HYPKV 10
HYPK+
Sbjct: 1620 HYPKM 1624
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PAGGGHYP 8
P GG+YP
Sbjct: 124 PPSGGNYP 131
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PAGGGHYP 8
P GG+YP
Sbjct: 124 PPSGGNYP 131
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 PAGGGH 6
P GGGH
Sbjct: 116 PYGGGH 121
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AGGGHY 7
A GGHY
Sbjct: 928 AAGGHY 933
>sp|PB1F2_I02A4|PROTEIN PB1-F2|Influenza A virus (strain A/Silky
Query: 6 HYPKV 10
HYP++
Sbjct: 41 HYPRI 45
>sp|PB1F2_I02A3|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong
Query: 6 HYPKV 10
HYP++
Sbjct: 41 HYPRI 45
>sp|PB1F2_I02A2|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong
Query: 6 HYPKV 10
HYP++
Sbjct: 41 HYPRI 45
>sp|PB1F2_I02A1|PROTEIN PB1-F2|Influenza A virus (strain A/Guinea
Query: 6 HYPKV 10
HYP++
Sbjct: 41 HYPRI 45
>sp|NSP5_ROTHW|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/United
Query: 6 HYPKV 10
HYP++
Sbjct: 145 HYPRI 149
>sp|NSP5_ROTHK|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 6 HYPKV 10
HYP++
Sbjct: 145 HYPRI 149
>sp|NSP5_ROTAM|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/United
Query: 6 HYPKV 10
HYP++
Sbjct: 145 HYPRI 149
>sp|NSP5_ROTAD|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/United
Query: 6 HYPKV 10
HYP++
Sbjct: 145 HYPRI 149
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 6 HYPKV 10
HYP+V
Sbjct: 23 HYPEV 27
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 HYPKV 10
HYP+V
Sbjct: 23 HYPEV 27
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 HYPKV 10
HYP+V
Sbjct: 23 HYPEV 27
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PAG-GGHYP 8
P+G GG+YP
Sbjct: 128 PSGRGGNYP 136
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PAG-GGHYP 8
P+G GG+YP
Sbjct: 128 PSGKGGNYP 136
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 5 GHYP 8
GHYP
Sbjct: 768 GHYP 771
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 PAGGGH 6
PAG GH
Sbjct: 248 PAGSGH 253
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 2 AGGGH 6
+GGGH
Sbjct: 289 SGGGH 293
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 PAGGGH 6
PAGGG+
Sbjct: 114 PAGGGN 119
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 2 AGGGHY 7
AGGG Y
Sbjct: 301 AGGGRY 306
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 3 GGGHY 7
G GHY
Sbjct: 152 GSGHY 156
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 GGGHY 7
G GHY
Sbjct: 1209 GSGHY 1213
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 GGGHY 7
G GHY
Sbjct: 1209 GSGHY 1213
3|SequenceR|20|11|LEVRLPAGGG
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 4 RLPAGGG 10
R+PAGGG
Sbjct: 112 RVPAGGG 118
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 1 LEVRLPAGGG 10
+EVRL A GG
Sbjct: 170 IEVRLQASGG 179
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 3 VRLPAGGG 10
+RL AGGG
Sbjct: 106 IRLSAGGG 113
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 LEVRLPAGG 9
L+ +LPAGG
Sbjct: 67 LQKKLPAGG 75
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain
Query: 1 LEVRLPAGG 9
L+ +LPAGG
Sbjct: 67 LQKKLPAGG 75
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 LEVRLPAGG 9
L+ +LPAGG
Sbjct: 67 LQKKLPAGG 75
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 EVRLPAGG 9
+ RLP GG
Sbjct: 385 DFRLPVGG 392
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 LEVRLPAGGG 10
+E +LP+G G
Sbjct: 491 IEKQLPSGNG 500
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 LEVRLPAGGG 10
+E +LP+G G
Sbjct: 491 IEKQLPSGNG 500
>sp|UL76_HCMVM|PROTEIN UL76|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 VRLPAGGG 10
+RLP GGG
Sbjct: 141 LRLPRGGG 148
>sp|UL76_HCMVA|PROTEIN UL76|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 VRLPAGGG 10
+RLP GGG
Sbjct: 141 LRLPRGGG 148
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 VRLPAG 8
VRLP+G
Sbjct: 245 VRLPSG 250
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 VRLPAG 8
VRLP+G
Sbjct: 245 VRLPSG 250
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 VRLPAG 8
VRLP+G
Sbjct: 245 VRLPSG 250
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 3 VRLPAG 8
VRLP+G
Sbjct: 245 VRLPSG 250
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 VRLPAG 8
VRLP+G
Sbjct: 245 VRLPSG 250
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 VRLPAG 8
VRLP+G
Sbjct: 245 VRLPSG 250
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 VRLPAG 8
VRLP+G
Sbjct: 245 VRLPSG 250
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 EVRLPAGGG 10
+V +PAGG
Sbjct: 608 KVLMPAGGA 616
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 LEVRLPAGGG 10
+E LP+G G
Sbjct: 491 IEKHLPSGNG 500
>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 83 IRLSAGG 89
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 3 VRLPAGG 9
+RL AGG
Sbjct: 106 IRLSAGG 112
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 4 RLPAGGG 10
++P GGG
Sbjct: 514 KIPMGGG 520
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 4 RLPAGGG 10
++P GGG
Sbjct: 514 KIPMGGG 520
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 1 LEVRLPAG 8
LEV LP G
Sbjct: 547 LEVELPPG 554
>sp|NP04_HHV11|NUCLEAR protein UL4|Human herpesvirus 1 (strain 17)
Query: 4 RLPAGG 9
RLP GG
Sbjct: 50 RLPRGG 55
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 3 VRLPAGGG 10
V +PAG G
Sbjct: 583 VNVPAGAG 590
4|SequenceR|25|16|YMCTPLEVRL
>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 YMCTPLEVRL 10
++C P++V+L
Sbjct: 163 WLCNPMDVKL 172
>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)
Query: 3 CTPLEVRL 10
CTP EVR+
Sbjct: 165 CTPDEVRV 172
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 YMCTPLEVR 9
+M PLEVR
Sbjct: 1046 WMQVPLEVR 1054
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 YMCTPLEVR 9
+M PLEVR
Sbjct: 1046 WMQVPLEVR 1054
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 YMCTPLEVR 9
+M PLEVR
Sbjct: 1046 WMQVPLEVR 1054
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 2 MCTPLEVR 9
+C P+E+R
Sbjct: 185 LCPPIELR 192
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YMCTPLEVRL 10
Y+C P +VR+
Sbjct: 76 YLCPPEQVRV 85
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YMCTPLEVRL 10
Y+C P +VR+
Sbjct: 76 YLCPPEQVRV 85
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 4 TPLEVRL 10
TPLE+R
Sbjct: 1057 TPLEIRF 1063
>sp|VP7_ROTHW|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 YMCTPLEVRL 10
++C P++V L
Sbjct: 163 WLCNPMDVTL 172
>sp|VP7_ROTAD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 YMCTPLEVRL 10
++C P++V L
Sbjct: 163 WLCNPMDVTL 172
>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 YMCTPLEVRL 10
++C P++V L
Sbjct: 163 WLCNPMDVTL 172
>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDISL 172
>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDISL 172
>sp|VP7_ROTKU|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDISL 172
>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDISL 172
>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDISL 172
>sp|VP7_ROTH4|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDITL 172
>sp|VP7_ROTYO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDITL 172
>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 YMCTPLEVRL 10
++C P++V L
Sbjct: 163 WLCNPMDVTL 172
>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDITL 172
>sp|VP7_ROTHP|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDITL 172
>sp|VP7_ROTAM|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDITL 172
>sp|VP7_ROTHX|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDITL 172
>sp|VP7_ROTHT|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDITL 172
>sp|VP7_ROTHV|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDIAL 172
>sp|VP7_ROTHK|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDITL 172
>sp|VP7_ROTHJ|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDITL 172
>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDITL 172
>sp|UNG_HHV23|URACIL-DNA glycosylase|Human herpesvirus 2 (strain 333)
Query: 3 CTPLEVRL 10
CTP +VR+
Sbjct: 126 CTPDDVRV 133
>sp|VP7_ROTHM|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDITL 172
>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDIAL 172
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 YMCTPLE 7
Y C P+E
Sbjct: 1490 YQCRPVE 1496
>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDITL 172
>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDITL 172
>sp|UNG_HHV2H|URACIL-DNA glycosylase|Human herpesvirus 2 (strain HG52)
Query: 3 CTPLEVRL 10
CTP +VR+
Sbjct: 86 CTPDDVRV 93
>sp|VP7_ROTH6|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDIAL 172
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 YMCTPLE 7
Y C P+E
Sbjct: 1490 YQCRPVE 1496
>sp|VP7_ROTH3|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDITL 172
>sp|VP7_ROTHB|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 YMCTPLEVRL 10
++C P+++ L
Sbjct: 163 WLCNPMDIAL 172
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 2 MCTPLEV 8
+C PLE+
Sbjct: 446 LCNPLEM 452
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 1 YMCTPL 6
Y CTP+
Sbjct: 231 YKCTPV 236
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 1 YMCTPL 6
Y CTP+
Sbjct: 231 YKCTPV 236
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 YMCTPLEVR 9
Y C LE+R
Sbjct: 700 YRCGELELR 708
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 YMCTPLEVR 9
Y C LE+R
Sbjct: 700 YRCGELELR 708
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 YMCTPLEVR 9
Y C LE+R
Sbjct: 700 YRCGELELR 708
5|SequenceR|30|21|VNPLRYMCTP
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VNPLRYMC 8
V+P+ Y+C
Sbjct: 681 VDPVEYLC 688
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 PLRYMCT 9
P+RYM T
Sbjct: 1742 PVRYMTT 1748
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 PLRYMCT 9
P+RYM T
Sbjct: 1742 PVRYMTT 1748
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 PLRYMCT 9
P+RYM T
Sbjct: 1738 PVRYMTT 1744
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 3 PLRYMC 8
PLRY C
Sbjct: 576 PLRYAC 581
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 3 PLRYMC 8
PLRY C
Sbjct: 579 PLRYAC 584
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 3 PLRYMC 8
PLRY C
Sbjct: 576 PLRYAC 581
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 1 VNPLRY 6
+NPLRY
Sbjct: 450 LNPLRY 455
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 2 NPLRYMCTP 10
NP+ +C P
Sbjct: 100 NPINSLCYP 108
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 3 PLRYMCTP 10
PLR C P
Sbjct: 267 PLRLPCGP 274
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 3 PLRYMCTP 10
PL CTP
Sbjct: 567 PLNSTCTP 574
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 PLRYMCTP 10
PLR C P
Sbjct: 267 PLRLPCGP 274
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 PLRYMCTP 10
PLR C P
Sbjct: 267 PLRLPCGP 274
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 4 LRYMCT 9
L+Y+CT
Sbjct: 368 LKYLCT 373
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 RYMCTP 10
RY C P
Sbjct: 43 RYACNP 48
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 VNPLRYMCTP 10
+NPL+Y P
Sbjct: 1445 LNPLQYARYP 1454
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 4 LRYMCT 9
LR++CT
Sbjct: 391 LRWLCT 396
>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NPLRYMCTP 10
+PL CTP
Sbjct: 102 SPLLLSCTP 110
>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NPLRYMCTP 10
+PL CTP
Sbjct: 102 SPLLLSCTP 110
>sp|VB05_VACC8|TRUNCATED plaque-size/host range protein|Vaccinia virus (strain LC16m8)
Query: 2 NPLRYMCT 9
NP + MCT
Sbjct: 70 NPCKKMCT 77
>sp|PG190_VACCL|PROTEIN OPG190|Vaccinia virus (strain Lister) (VACV)
Query: 2 NPLRYMCT 9
NP + MCT
Sbjct: 70 NPCKKMCT 77
>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)
Query: 2 NPLRYMCT 9
NP + MCT
Sbjct: 70 NPCKKMCT 77
>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)
Query: 2 NPLRYMCT 9
NP + MCT
Sbjct: 70 NPCKKMCT 77
>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)
Query: 2 NPLRYMCT 9
NP + MCT
Sbjct: 70 NPCKKMCT 77
>sp|PG190_VACCT|PROTEIN OPG190|Vaccinia virus (strain Tian Tan)
Query: 2 NPLRYMCT 9
NP + MCT
Sbjct: 70 NPCKKMCT 77
>sp|PG190_VACCC|PROTEIN OPG190|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NPLRYMCT 9
NP + MCT
Sbjct: 70 NPCKKMCT 77
>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)
Query: 5 RYMCT 9
RY+CT
Sbjct: 126 RYLCT 130
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 5 RYMCTP 10
RY C P
Sbjct: 43 RYACNP 48
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 1 VNPLRYMCTP 10
VNPL TP
Sbjct: 263 VNPLLGAATP 272
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 5 RYMCTP 10
RY+C P
Sbjct: 148 RYVCVP 153
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen
Query: 5 RYMCT 9
RY+CT
Sbjct: 126 RYLCT 130
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 5 RYMCT 9
RY+CT
Sbjct: 128 RYLCT 132
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VNPLRY 6
+NPL+Y
Sbjct: 449 LNPLKY 454
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NPLRYMCT 9
NP++ CT
Sbjct: 291 NPVKINCT 298
6|SequenceR|35|26|YSRGHVNPLR
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 SRGHVNPL 9
SRG +NP+
Sbjct: 2010 SRGDINPI 2017
>sp|DUT_HHV6G|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 1 YSRGHVNPL 9
Y R H NP+
Sbjct: 102 YERKHGNPV 110
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 SRGHVNP 8
SRG +NP
Sbjct: 2010 SRGDINP 2016
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 SRGHVNP 8
SRG +NP
Sbjct: 2010 SRGDINP 2016
>sp|NS1_INBYA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 1 YSRGHVNPLR 10
++ GH P+R
Sbjct: 247 FNEGHSKPIR 256
>sp|NS1_INBVJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Victoria/1987)
Query: 1 YSRGHVNPLR 10
++ GH P+R
Sbjct: 247 FNEGHSKPIR 256
>sp|NS1_INBGA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GA/1986)
Query: 1 YSRGHVNPLR 10
++ GH P+R
Sbjct: 247 FNEGHSKPIR 256
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SRGHVNPLR 10
SRG V+PL+
Sbjct: 108 SRGPVSPLQ 116
>sp|NS1_INBSJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/1964)
Query: 1 YSRGHVNPLR 10
++ GH P+R
Sbjct: 247 FNEGHSKPIR 256
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SRGHVNPLR 10
SRG V+PL+
Sbjct: 108 SRGPVSPLQ 116
>sp|NS1_INBHK|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Hong
Query: 1 YSRGHVNPLR 10
++ GH P+R
Sbjct: 247 FNEGHSKPIR 256
>sp|NS1_INBBA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/BA/1978)
Query: 1 YSRGHVNPLR 10
++ GH P+R
Sbjct: 247 FNEGHSKPIR 256
>sp|NS1_INBAD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 1 YSRGHVNPLR 10
++ GH P+R
Sbjct: 247 FNEGHSKPIR 256
>sp|NS1_INBAC|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 1 YSRGHVNPLR 10
++ GH P+R
Sbjct: 247 FNEGHSKPIR 256
>sp|NS1_INB|NON-STRUCTURAL protein 1|Influenza B virus (strain B/ID/1986)
Query: 1 YSRGHVNPLR 10
++ GH P+R
Sbjct: 247 FNEGHSKPIR 256
>sp|NS1_INBSI|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 YSRGHVNPLR 10
++ GH P+R
Sbjct: 247 FNEGHSKPIR 256
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 2 SRGHVNPL 9
+RG VNP
Sbjct: 410 TRGGVNPF 417
>sp|DUT_HHV6Z|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6B (strain
Query: 1 YSRGHVNPL 9
Y R H NP+
Sbjct: 102 YVRKHGNPV 110
>sp|NS1_INBMD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Maryland/1959)
Query: 1 YSRGHVNPLR 10
+ GH P+R
Sbjct: 247 FDEGHSKPIR 256
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 5 HVNPLR 10
+VNPLR
Sbjct: 793 NVNPLR 798
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 HVNPLR 10
+VNPLR
Sbjct: 793 NVNPLR 798
>sp|NS1_INBRU|NON-STRUCTURAL protein 1|Influenza B virus (strain B/RU/1969)
Query: 1 YSRGHVNPLR 10
+ GH P+R
Sbjct: 247 FDEGHSKPIR 256
>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)
Query: 1 YSRGHVNPLR 10
+ GH P+R
Sbjct: 247 FDEGHPKPIR 256
>sp|NS1_INBLE|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Lee/1940)
Query: 1 YSRGHVNPLR 10
+ GH P+R
Sbjct: 247 FDEGHSKPIR 256
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 YSRGHVNPLR 10
Y GH P R
Sbjct: 2467 YCDGHSEPFR 2476
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 YSRGHVNPLR 10
Y GH P R
Sbjct: 2445 YCDGHSEPFR 2454
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 YSRGHVNPLR 10
Y GH P R
Sbjct: 2440 YCDGHSEPFR 2449
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 1 YSRGHVNPLR 10
YS +NP++
Sbjct: 119 YSNNMINPIK 128
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 4 GHVNPL 9
GH+ PL
Sbjct: 20 GHIEPL 25
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YSRGHVNPLR 10
YS +NP++
Sbjct: 119 YSNNMINPIK 128
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 3 RGHVNPLR 10
+ H+ PLR
Sbjct: 283 KTHIEPLR 290
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 SRGHVNPL 9
+RGH+N +
Sbjct: 1490 ARGHLNDI 1497
7|SequenceR|40|31|GPAPGYSRGH
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 GPAPGYSR 8
GP PGY+R
Sbjct: 232 GPTPGYTR 239
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 GPAPGYSR 8
GP PGY+R
Sbjct: 232 GPTPGYTR 239
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 GPAPGYSR 8
GP PGY+R
Sbjct: 232 GPTPGYTR 239
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 GPAPGYSR 8
GP PGY+R
Sbjct: 232 GPTPGYTR 239
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 GPAPGYSR 8
GP PGY+R
Sbjct: 232 GPTPGYTR 239
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 GPAPGYSR 8
GP PGY+R
Sbjct: 232 GPTPGYTR 239
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 GPAPGYSR 8
GP PGY+R
Sbjct: 232 GPTPGYTR 239
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 GPAPGYSR 8
GP PGY+R
Sbjct: 232 GPTPGYTR 239
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 GPAPGYSR 8
GP PGY+R
Sbjct: 232 GPMPGYTR 239
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GPAPGYSRG 9
PAP YSR
Sbjct: 2073 SPAPNYSRA 2081
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GPAPGYSRG 9
PAP YSR
Sbjct: 2073 SPAPNYSRA 2081
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GPAPGYSRG 9
PAP YSR
Sbjct: 2073 SPAPNYSRA 2081
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GPAPGYSRG 9
PAP YSR
Sbjct: 2073 SPAPNYSRA 2081
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GPAPGYSRG 9
PAP YSR
Sbjct: 2073 SPAPNYSRA 2081
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GPAPGYSRG 9
PAP YSR
Sbjct: 2073 SPAPNYSRA 2081
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GPAPGYSRG 9
PAP YSR
Sbjct: 2073 SPAPNYSRA 2081
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 GPAPGYS 7
GPAP YS
Sbjct: 784 GPAPFYS 790
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 3 APGYSRGH 10
+PG+S GH
Sbjct: 682 SPGHSAGH 689
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 2 PAPGYSRGH 10
P PG RG
Sbjct: 486 PTPGVERGQ 494
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 PAPGYSRG 9
P PGY G
Sbjct: 257 PLPGYHAG 264
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 1 GPAPGYSR 8
PAPGY++
Sbjct: 441 APAPGYAK 448
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 3 APGYSRGH 10
PG S GH
Sbjct: 90 GPGKSDGH 97
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 3 APGYSRGH 10
PG S GH
Sbjct: 90 GPGKSDGH 97
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 PAPGYSRG 9
PAP Y R
Sbjct: 2079 PAPNYQRA 2086
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 PAPGYSRG 9
PAP Y R
Sbjct: 2078 PAPNYQRA 2085
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 PAPGYSRG 9
PAP Y R
Sbjct: 2079 PAPNYKRA 2086
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 PAPGYSRGH 10
P P +RGH
Sbjct: 857 PTPQCARGH 865
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 GPAPGYSRG 9
G PG SRG
Sbjct: 35 GNRPGPSRG 43
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 GPAPGYSRG 9
G PG SRG
Sbjct: 35 GNRPGPSRG 43
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 GPAPGYSRG 9
G PG SRG
Sbjct: 35 GNRPGPSRG 43
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GPAPGYSRG 9
G PG SRG
Sbjct: 35 GNRPGPSRG 43
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 GPAPGYSRG 9
G PG SRG
Sbjct: 35 GNRPGPSRG 43
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GPAPGYSRG 9
G PG SRG
Sbjct: 35 GNRPGPSRG 43
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 GPAPGYSRG 9
G PG SRG
Sbjct: 35 GNRPGPSRG 43
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 3 APGYSRG 9
APG S+G
Sbjct: 285 APGRSKG 291
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 3 APGYSRG 9
APG S+G
Sbjct: 285 APGRSKG 291
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 3 APGYSRG 9
APG S+G
Sbjct: 285 APGRSKG 291
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 3 APGYSRG 9
APG S+G
Sbjct: 285 APGRSKG 291
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 GPAPGYSRG 9
G PG SRG
Sbjct: 35 GNRPGPSRG 43
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 GPAPGYSRG 9
G PG SRG
Sbjct: 35 GNRPGPSRG 43
>sp|UL78_HCMVM|PROTEIN UL78|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GPAPGYS 7
GP GYS
Sbjct: 26 GPFEGYS 32
>sp|UL78_HCMVA|UNCHARACTERIZED protein UL78|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GPAPGYS 7
GP GYS
Sbjct: 26 GPFEGYS 32
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 3 APGYSRG 9
APG S+G
Sbjct: 285 APGRSKG 291
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 PAPGYSRG 9
P+P Y+R
Sbjct: 2080 PSPNYTRA 2087
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 GPAPGYSRG 9
G PG SRG
Sbjct: 35 GNRPGPSRG 43
>sp|VL2_HPV52|MINOR capsid protein L2|Human papillomavirus 52
Query: 2 PAPGYSRGH 10
PAP + GH
Sbjct: 172 PAPAEASGH 180
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 5 GYSRGH 10
GYSRG+
Sbjct: 1964 GYSRGN 1969
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 5 GYSRGH 10
GYSRG+
Sbjct: 1964 GYSRGN 1969
>sp|NCAP_CVHOC|NUCLEOPROTEIN coronavirus OC43 (HCoV-OC43)
Query: 2 PAPGYSRGH 10
P P RGH
Sbjct: 391 PKPQRQRGH 399
>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58
Query: 2 PAPGYSRGH 10
PAP + GH
Sbjct: 172 PAPAEASGH 180
8|SequenceR|45|36|QVHGAGPAPG
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 QVHGAGPAPG 10
+V G GP PG
Sbjct: 141 KVQGTGPCPG 150
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 QVHGAGPAPG 10
+V G GP PG
Sbjct: 141 KVQGTGPCPG 150
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 QVHGAGPAPG 10
+V G GP PG
Sbjct: 141 KVQGTGPCPG 150
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 QVHGAGPAPG 10
+V G GP PG
Sbjct: 140 KVSGTGPCPG 149
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 1 QVHGAGPAPG 10
+V G GP PG
Sbjct: 141 KVQGTGPCPG 150
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 1 QVHGAGPAPG 10
+V G GP PG
Sbjct: 141 KVQGTGPCPG 150
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 QVHGAGPAPG 10
+V G GP PG
Sbjct: 141 KVQGTGPCPG 150
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 QVHGAGPAPG 10
+V G GP PG
Sbjct: 141 KVQGTGPCPG 150
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 QVHGAGPAPG 10
+V G GP PG
Sbjct: 141 KVQGTGPCPG 150
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 1 QVHGAGPAPG 10
+ G GP PG
Sbjct: 140 KAQGTGPCPG 149
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 QVHGAGPAPG 10
+V G GP PG
Sbjct: 140 KVSGTGPCPG 149
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 QVHGAGPAPG 10
+ G GP PG
Sbjct: 140 KAQGTGPCPG 149
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 QVHGAGPAPG 10
+ G GP PG
Sbjct: 140 KAQGTGPCPG 149
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 QVHGAGPAPG 10
+ G GP PG
Sbjct: 140 KAQGTGPCPG 149
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 QVHGAGPAPG 10
+ G GP PG
Sbjct: 140 KAQGTGPCPG 149
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 QVHGAGPAPG 10
+ G GP PG
Sbjct: 140 KAQGTGPCPG 149
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 1 QVHGAGPAP 9
Q+HG P P
Sbjct: 3 QIHGLSPTP 11
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 QVHGAGPAPG 10
+ G GP PG
Sbjct: 140 KAQGTGPCPG 149
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 QVHGAGPAPG 10
Q+HG +PG
Sbjct: 310 QLHGQDESPG 319
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 QVHGAGPAPG 10
Q+HG +PG
Sbjct: 310 QLHGQDESPG 319
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QVHGAGPAPG 10
Q H +G PG
Sbjct: 776 QQHASGEGPG 785
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QVHGAGPAPG 10
Q H +G PG
Sbjct: 776 QQHASGEGPG 785
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QVHGAGPAPG 10
Q H +G PG
Sbjct: 776 QQHASGEGPG 785
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 2 VHGAGPAP 9
HG GPAP
Sbjct: 17 CHGRGPAP 24
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 QVHGAGPAPG 10
Q+H P PG
Sbjct: 2133 QIHRFAPTPG 2142
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 QVHGAGPAPG 10
Q+H P PG
Sbjct: 2133 QIHRFAPVPG 2142
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GAGPAPG 10
G GP PG
Sbjct: 207 GGGPRPG 213
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 4 GAGPAPG 10
GAGP PG
Sbjct: 230 GAGPTPG 236
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 GAGPAPG 10
GAGP PG
Sbjct: 230 GAGPTPG 236
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 4 GAGPAPG 10
GAGP PG
Sbjct: 230 GAGPTPG 236
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 4 GAGPAPG 10
GAGP PG
Sbjct: 230 GAGPTPG 236
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 4 GAGPAPG 10
GAGP PG
Sbjct: 230 GAGPTPG 236
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 4 GAGPAPG 10
GAGP PG
Sbjct: 230 GAGPTPG 236
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 4 GAGPAPG 10
GAGP PG
Sbjct: 230 GAGPTPG 236
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 4 GAGPAPG 10
GAGP PG
Sbjct: 230 GAGPTPG 236
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 1 QVHGAGPAP 9
Q+HG P P
Sbjct: 3 QIHGLSPTP 11
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 VHGAGPA 8
VHG GP
Sbjct: 962 VHGQGPG 968
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 QVHGAGPAPG 10
Q H A APG
Sbjct: 9 QTHHAARAPG 18
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 QVHGAGPAP 9
Q+HG P P
Sbjct: 3 QIHGLSPTP 11
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 4 GAGPAPG 10
GAGP PG
Sbjct: 230 GAGPMPG 236
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 1 QVHGAGPAPG 10
Q G GP PG
Sbjct: 1010 QKSGTGPQPG 1019
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QVHGAGPAPG 10
Q G GP PG
Sbjct: 1011 QKSGTGPQPG 1020
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 QVHGAGPAPG 10
Q++ GP PG
Sbjct: 293 QLNPPGPDPG 302
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 HGAGPA 8
HG GPA
Sbjct: 1295 HGCGPA 1300
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QVHGAGPAPG 10
Q++ GP PG
Sbjct: 293 QLNPPGPDPG 302
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 QVHGAGPA 8
QV+ AGP
Sbjct: 796 QVYSAGPG 803
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 QVHGAGPA 8
QV+ AGP
Sbjct: 794 QVYSAGPG 801
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 5 AGPAPG 10
+GP PG
Sbjct: 264 SGPGPG 269
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 QVHGAGPA 8
QV+ AGP
Sbjct: 796 QVYSAGPG 803
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 QVHGAGPA 8
QV+ AGP
Sbjct: 796 QVYSAGPG 803
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 QVHGAGPA 8
QV+ AGP
Sbjct: 796 QVYSAGPG 803
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 QVHGAGPAPG 10
Q+H A P P
Sbjct: 1349 QLHQAQPLPS 1358
>sp|SHDAG_HDVV2|SMALL delta antigen|Hepatitis delta virus genotype III
Query: 5 AGPAPG 10
AGP PG
Sbjct: 144 AGPRPG 149
9|SequenceR|50|41|LNSEEQVHGA
>sp|SODL_MONPZ|CU-ZN superoxide dismutase-like protein|Monkeypox virus (strain
Query: 5 EQVHG 9
EQVHG
Sbjct: 18 EQVHG 22
>sp|SODL_MONPV|CU-ZN superoxide dismutase-like protein OPG175|Monkeypox virus (MPXV)
Query: 5 EQVHG 9
EQVHG
Sbjct: 18 EQVHG 22
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LNSEEQV 7
+N+EEQ+
Sbjct: 541 INTEEQI 547
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 LNSEEQV 7
+N+EEQ+
Sbjct: 541 INTEEQI 547
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 LNSEEQV 7
LN++EQV
Sbjct: 233 LNADEQV 239
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 1 LNSEEQV 7
LN++EQV
Sbjct: 233 LNADEQV 239
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LNSEEQV 7
LN++EQV
Sbjct: 233 LNADEQV 239
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LNSEEQV 7
LN++EQV
Sbjct: 233 LNADEQV 239
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 LNSEEQV 7
LN++EQV
Sbjct: 233 LNADEQV 239
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 LNSEEQVHGA 10
LNS HGA
Sbjct: 540 LNSTRPPHGA 549
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 2 NSEEQVHG 9
N+E+ +HG
Sbjct: 341 NNEKGIHG 348
10|SequenceR|55|46|LAQLSLNSEE
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 1 LAQLSLNSEE 10
LAQ N EE
Sbjct: 87 LAQTDFNKEE 96
>sp|SEMA_VAR67|SEMAPHORIN-LIKE protein A43|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LAQLSLNSE 9
+AQ+ LN E
Sbjct: 49 IAQMCLNDE 57
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LAQLSLNSE 9
+AQ+ LN E
Sbjct: 191 IAQMCLNDE 199
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 LAQLSLNS 8
LAQL LN+
Sbjct: 48 LAQLKLNA 55
>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 LAQLSLNS 8
LAQL LN+
Sbjct: 48 LAQLKLNA 55
11|SequenceR|60|51|DQRSELAQLS
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 2 QRSELAQLS 10
+RSEL+QLS
Sbjct: 242 KRSELSQLS 250
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 2 QRSELAQLS 10
+RSEL+QLS
Sbjct: 242 KRSELSQLS 250
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 2 QRSELAQLS 10
+RSEL+QLS
Sbjct: 242 KRSELSQLS 250
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 QRSELAQLS 10
+RSEL+QLS
Sbjct: 242 KRSELSQLS 250
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 DQRSELAQLS 10
++ SEL+QLS
Sbjct: 241 NKGSELSQLS 250
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 SELAQLS 10
SEL+QLS
Sbjct: 244 SELSQLS 250
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 3 RSELAQLS 10
R+E+AQ+S
Sbjct: 377 RAEMAQMS 384
12|SequenceR|65|56|RKLIDDQRSE
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 KLIDDQR 8
KL+DD+R
Sbjct: 2933 KLVDDER 2939
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 KLIDDQRS 9
KL+D++RS
Sbjct: 2946 KLVDEERS 2953
>sp|VGF_VARV|PRO-VARIOLA growth factor|Variola virus
Query: 3 LIDDQRSE 10
L+D QRSE
Sbjct: 85 LVDYQRSE 92
>sp|VGF_VAR67|PRO-VARIOLA growth factor|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 LIDDQRSE 10
L+D QRSE
Sbjct: 85 LVDYQRSE 92
>sp|VGF_VACCT|PRO-VACCINIA growth factor|Vaccinia virus (strain Tian Tan)
Query: 3 LIDDQRSE 10
L+D QRSE
Sbjct: 85 LVDYQRSE 92
>sp|VGF_VACCP|PRO-VACCINIA growth factor|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 LIDDQRSE 10
L+D QRSE
Sbjct: 85 LVDYQRSE 92
>sp|VGF_VACCC|PRO-VACCINIA growth factor|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LIDDQRSE 10
L+D QRSE
Sbjct: 85 LVDYQRSE 92
>sp|VGF_VACCA|PRO-VACCINIA growth factor|Vaccinia virus (strain Ankara) (VACV)
Query: 3 LIDDQRSE 10
L+D QRSE
Sbjct: 85 LVDYQRSE 92
>sp|U79_HHV7J|PROTEIN U79|Human herpesvirus 7 (strain JI)
Query: 1 RKLIDDQRSE 10
RKL DD+R+E
Sbjct: 218 RKLEDDRRNE 227
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 IDDQRSE 10
+DD RSE
Sbjct: 779 VDDPRSE 785
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 IDDQRSE 10
+DD RSE
Sbjct: 779 VDDPRSE 785
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 IDDQRSE 10
+DD RSE
Sbjct: 779 VDDPRSE 785
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 IDDQRSE 10
+DD RSE
Sbjct: 773 VDDPRSE 779
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 IDDQRSE 10
+DD RSE
Sbjct: 779 VDDPRSE 785
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 IDDQRSE 10
+DD RSE
Sbjct: 779 VDDPRSE 785
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 IDDQRSE 10
+DD RSE
Sbjct: 779 VDDPRSE 785
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 IDDQRSE 10
+DD RSE
Sbjct: 779 VDDPRSE 785
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 IDDQRSE 10
+DD RSE
Sbjct: 779 VDDPRSE 785
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 RKLIDDQRSE 10
RKLID+++ +
Sbjct: 592 RKLIDERKHD 601
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 IDDQRSE 10
+DD RSE
Sbjct: 779 VDDPRSE 785
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 IDDQRSE 10
+DD RSE
Sbjct: 779 VDDPRSE 785
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 IDDQRSE 10
+DD RSE
Sbjct: 283 VDDPRSE 289
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 1 RKLIDDQRS 9
RKL+ QRS
Sbjct: 576 RKLVSIQRS 584
>sp|PHOSP_PI3H4|PHOSPHOPROTEIN parainfluenza 3 virus (strain
Query: 1 RKLIDDQR 8
R+LI++QR
Sbjct: 446 RRLIENQR 453
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 1 RKLIDDQRS 9
RKL+ QRS
Sbjct: 576 RKLVSIQRS 584
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 1 RKLIDDQRS 9
RKL+ QRS
Sbjct: 576 RKLVSIQRS 584
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 1 RKLIDDQRS 9
RKL+ QRS
Sbjct: 576 RKLVSIQRS 584
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 1 RKLIDDQRS 9
RKL+ QRS
Sbjct: 576 RKLVSIQRS 584
13|SequenceR|70|61|KLEYLRKLID
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 1 KLEYLRKLI 9
+L YLRKL+
Sbjct: 319 RLSYLRKLV 327
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LEYLRKLID 10
L+Y+RKL D
Sbjct: 5277 LQYIRKLHD 5285
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LEYLRKLID 10
L+Y+RKL D
Sbjct: 5254 LQYIRKLHD 5262
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 3 EYLRKLID 10
EY+R L+D
Sbjct: 516 EYMRNLLD 523
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 3 EYLRKLID 10
+YLR L+D
Sbjct: 515 DYLRNLLD 522
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 1 KLEYLRKLI 9
+L +LRKL+
Sbjct: 319 RLSHLRKLV 327
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 1 KLEYLRKLI 9
+L +LRKL+
Sbjct: 319 RLSHLRKLV 327
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 1 KLEYLRKLI 9
+L +LRKL+
Sbjct: 319 RLSHLRKLV 327
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 KLEYLRKLI 9
+L +LRKL+
Sbjct: 319 RLSHLRKLV 327
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 1 KLEYLRKLI 9
+L +LRKL+
Sbjct: 319 RLSHLRKLV 327
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 1 KLEYLRKLI 9
+L +LRKL+
Sbjct: 319 RLSHLRKLV 327
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 KLEYLRKLI 9
+L +LRKL+
Sbjct: 319 RLSHLRKLV 327
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 1 KLEYLRKLI 9
+L +LRKL+
Sbjct: 319 RLSHLRKLV 327
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 KLEYLRKLI 9
+L +LRKL+
Sbjct: 319 RLSHLRKLV 327
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 KLEYLRKLI 9
+L +LRKL+
Sbjct: 319 RLSHLRKLV 327
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 KLEYLRKLI 9
+L +LRKL+
Sbjct: 319 RLSHLRKLV 327
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 KLEYLRKLI 9
+L +LRKL+
Sbjct: 319 RLSHLRKLV 327
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 1 KLEYLRKLI 9
+L +LRKL+
Sbjct: 319 RLSHLRKLV 327
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 1 KLEYLRKLI 9
+L +LRKL+
Sbjct: 319 RLSHLRKLV 327
>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 KLEYLRKLI 9
+L +LRKL+
Sbjct: 319 RLSHLRKLV 327
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 LEYLRKL 8
LEY++KL
Sbjct: 5288 LEYIKKL 5294
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 LEYLRKL 8
LEY++KL
Sbjct: 5308 LEYIKKL 5314
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 LEYLRKL 8
LEY++KL
Sbjct: 5338 LEYIKKL 5344
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 4 YLRKLID 10
YLR L+D
Sbjct: 529 YLRNLLD 535
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 4 YLRKLID 10
YLR L+D
Sbjct: 529 YLRNLLD 535
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 4 YLRKLID 10
YLR L+D
Sbjct: 528 YLRNLLD 534
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 4 YLRKLID 10
YLR L+D
Sbjct: 529 YLRNLLD 535
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 4 YLRKLID 10
YLR L+D
Sbjct: 529 YLRNLLD 535
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 KLEYLRKL 8
+LEYL +L
Sbjct: 747 RLEYLNRL 754
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 4 YLRKLID 10
Y+RKLI+
Sbjct: 2194 YIRKLIE 2200
Query: 3 EYLRKLID 10
E+LRK+++
Sbjct: 1644 EFLRKVVN 1651
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 4 YLRKLID 10
Y+RKLI+
Sbjct: 2194 YIRKLIE 2200
Query: 3 EYLRKLID 10
E+LRK+++
Sbjct: 1644 EFLRKVVN 1651
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 LEYLRKLID 10
L++LR ++D
Sbjct: 1788 LQHLRTMVD 1796
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 LEYLRKLID 10
L++LR ++D
Sbjct: 1788 LQHLRTMVD 1796
14|SequenceR|75|66|GDVAAKLEYL
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 GDVAAKLEYL 10
GD AKLE+L
Sbjct: 100 GDHTAKLEFL 109
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 1 GDVAAKLEYL 10
GD AKLE+L
Sbjct: 100 GDHTAKLEFL 109
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 GDVAAKLEY 9
GDV K++Y
Sbjct: 578 GDVIKKIQY 586
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DVAAKLEYL 10
D+A LE+L
Sbjct: 651 DIATTLEHL 659
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DVAAKLEYL 10
D+A LE+L
Sbjct: 651 DIATTLEHL 659
>sp|PG040_VAR67|SUPERINFECTION exclusion protein|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 VAAKLEY 9
+AAKL+Y
Sbjct: 251 MAAKLDY 257
15|SequenceR|80|71|IMKSLGDVAA
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 IMKSLGD 7
I+K+LGD
Sbjct: 191 ILKTLGD 197
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 5 LGDVAA 10
LGD+AA
Sbjct: 841 LGDIAA 846
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 IMKSLGDVA 9
I+K+LG VA
Sbjct: 6156 ILKNLGVVA 6164
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 IMKSLGDVA 9
I+K+LG VA
Sbjct: 6181 ILKNLGVVA 6189
16|SequenceR|85|76|ADPTQIMKSL
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 DPTQIM 7
DP+QIM
Sbjct: 305 DPSQIM 310
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DPTQIM 7
DP+QIM
Sbjct: 305 DPSQIM 310
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 2 DPTQIMKS 9
DP IMKS
Sbjct: 321 DPILIMKS 328
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 DPTQIMKS 9
DP IMKS
Sbjct: 321 DPILIMKS 328
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 2 DPTQIMKS 9
DP IMKS
Sbjct: 321 DPILIMKS 328
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 2 DPTQIMKS 9
DP IMKS
Sbjct: 321 DPILIMKS 328
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 DPTQIMKS 9
DP IMKS
Sbjct: 321 DPILIMKS 328
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 3 PTQIMK 8
PTQ+MK
Sbjct: 803 PTQLMK 808
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 3 PTQIMK 8
PTQ+MK
Sbjct: 803 PTQLMK 808
17|SequenceR|90|81|TVDLDADPTQ
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VDLDADPT 9
+DL+ADPT
Sbjct: 375 LDLEADPT 382
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VDLDADPT 9
+DL+ADPT
Sbjct: 375 LDLEADPT 382
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 3 DLDADP 8
DLD+DP
Sbjct: 77 DLDSDP 82
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 1 TVDLDADPT 9
TVDLD+ P+
Sbjct: 331 TVDLDSKPS 339
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 TVDLDADPT 9
TVD DPT
Sbjct: 1461 TVDFSLDPT 1469
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TVDLDADPT 9
TVD DPT
Sbjct: 1461 TVDFSLDPT 1469
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 TVDLDADPT 9
TVD DPT
Sbjct: 1461 TVDFSLDPT 1469
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 TVDLDADPT 9
TVD DPT
Sbjct: 1461 TVDFSLDPT 1469
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TVDLDADPT 9
TVD DPT
Sbjct: 1461 TVDFSLDPT 1469
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VDLDADPTQ 10
+ LDADP +
Sbjct: 1343 IKLDADPVE 1351
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TVDLDADPT 9
TVD DPT
Sbjct: 1461 TVDFSLDPT 1469
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 TVDLDADPT 9
TVD DPT
Sbjct: 1462 TVDFSLDPT 1470
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VDLDADPTQ 10
+ LDADP +
Sbjct: 1509 IKLDADPVE 1517
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 TVDLDADPT 9
TVD DPT
Sbjct: 1465 TVDFSLDPT 1473
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VDLDADPTQ 10
+ LDADP +
Sbjct: 1509 IKLDADPVE 1517
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VDLDADPTQ 10
+ LDADP +
Sbjct: 1507 IKLDADPVE 1515
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VDLDADPTQ 10
+ LDADP +
Sbjct: 1509 IKLDADPVE 1517
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VDLDADPTQ 10
+ LDADP +
Sbjct: 1509 IKLDADPVE 1517
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VDLDADPTQ 10
+ LDADP +
Sbjct: 1509 IKLDADPVE 1517
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VDLDADPTQ 10
+ LDADP +
Sbjct: 1509 IKLDADPVE 1517
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 1 TVDLDADPTQ 10
TVDL PTQ
Sbjct: 331 TVDLSLKPTQ 340
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VDLDADPTQ 10
+ LDADP +
Sbjct: 1509 IKLDADPVE 1517
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VDLDADPTQ 10
+ LDADP +
Sbjct: 1509 IKLDADPVE 1517
>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 VDLDADPT 9
+D+ ADPT
Sbjct: 269 IDITADPT 276
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TVDLDADPTQ 10
T+D DPT+
Sbjct: 550 TLDYTEDPTE 559
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TVDLDADPT 9
TVD DPT
Sbjct: 1461 TVDFSLDPT 1469
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TVDLDADPT 9
TVD DPT
Sbjct: 1461 TVDFSLDPT 1469
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TVDLDADPT 9
TVD DPT
Sbjct: 1461 TVDFSLDPT 1469
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TVDLDADPT 9
TVD DPT
Sbjct: 1461 TVDFSLDPT 1469
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 TVDLDADPT 9
TVD DPT
Sbjct: 1461 TVDFSLDPT 1469
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TVDLDADPT 9
TVD DPT
Sbjct: 1461 TVDFSLDPT 1469
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 TVDLDADPT 9
TVD DPT
Sbjct: 1462 TVDFSLDPT 1470
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 4 LDADPTQ 10
LD DP+Q
Sbjct: 2069 LDRDPSQ 2075
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 VDLDAD 7
VDLDAD
Sbjct: 6 VDLDAD 11
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 VDLDAD 7
VDLDAD
Sbjct: 6 VDLDAD 11
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 TVDLDAD 7
+VDLD D
Sbjct: 879 SVDLDVD 885
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 2 VDLDADP 8
+DL +DP
Sbjct: 617 IDLQSDP 623
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 2 VDLDADPTQ 10
VDL+ DP +
Sbjct: 581 VDLNIDPLE 589
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 VDLDAD 7
VDLDAD
Sbjct: 6 VDLDAD 11
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 VDLDADP 8
+DL +DP
Sbjct: 618 IDLQSDP 624
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 VDLDAD 7
VDLDAD
Sbjct: 6 VDLDAD 11
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 2 VDLDADP 8
+DL +DP
Sbjct: 618 IDLQSDP 624
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 2 VDLDADP 8
+DL +DP
Sbjct: 605 IDLQSDP 611
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 VDLDADP 8
+DL +DP
Sbjct: 605 IDLQSDP 611
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 2 VDLDADP 8
+DL +DP
Sbjct: 605 IDLQSDP 611
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 2 VDLDADP 8
+DL +DP
Sbjct: 611 IDLQSDP 617
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 VDLDADP 8
+DL +DP
Sbjct: 605 IDLQSDP 611
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 2 VDLDADP 8
+DL +DP
Sbjct: 605 IDLQSDP 611
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 2 VDLDADP 8
+DL +DP
Sbjct: 611 IDLQSDP 617
>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain
Query: 2 VDLDADPT 9
+DL+AD T
Sbjct: 69 IDLNADET 76
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 2 VDLDADP 8
+DL +DP
Sbjct: 605 IDLQSDP 611
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 VDLDADP 8
+DL +DP
Sbjct: 604 IDLQSDP 610
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 1 TVDLDA 6
T+DLDA
Sbjct: 183 TIDLDA 188
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 2 VDLDADP 8
+DL +DP
Sbjct: 604 IDLQSDP 610
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 2 VDLDADP 8
+DL +DP
Sbjct: 604 IDLQSDP 610
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 2 VDLDADP 8
+DL +DP
Sbjct: 605 IDLQSDP 611
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 2 VDLDADPTQ 10
VD D P+Q
Sbjct: 141 VDTDTGPSQ 149
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 1 TVDLDADPTQ 10
TVDL P Q
Sbjct: 331 TVDLSTKPQQ 340
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 TVDLDADP 8
TVD DP
Sbjct: 1461 TVDFSLDP 1468
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 2 VDLDADP 8
+DL +DP
Sbjct: 604 IDLQSDP 610
18|SequenceR|95|86|AQIINTVDLD
>sp|REX_HTL32|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 1 AQIINTVDLD 10
AQ+ NT+ LD
Sbjct: 85 AQLYNTLSLD 94
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QIINTVDL 9
Q INTVD+
Sbjct: 1079 QNINTVDM 1086
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QIINTVDL 9
Q INTVD+
Sbjct: 1079 QNINTVDM 1086
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 1 AQIINTVDL 9
AQ+I+ VD+
Sbjct: 149 AQVIDLVDM 157
19|SequenceR|100|91|TTPEDAQIIN
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TTPEDA 6
TTPEDA
Sbjct: 2383 TTPEDA 2388
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 TPEDAQ 7
TPEDAQ
Sbjct: 352 TPEDAQ 357
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 TPEDAQ 7
TPEDAQ
Sbjct: 351 TPEDAQ 356
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 TPEDAQ 7
TPEDAQ
Sbjct: 349 TPEDAQ 354
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 TPEDAQ 7
TPEDAQ
Sbjct: 350 TPEDAQ 355
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 TPEDAQ 7
TPEDAQ
Sbjct: 350 TPEDAQ 355
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 TPEDAQ 7
TPEDAQ
Sbjct: 351 TPEDAQ 356
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 TPEDAQ 7
TPEDAQ
Sbjct: 351 TPEDAQ 356
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 TPEDAQ 7
TPEDAQ
Sbjct: 351 TPEDAQ 356
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 TPEDAQ 7
TPEDAQ
Sbjct: 351 TPEDAQ 356
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 TPEDAQ 7
TPEDAQ
Sbjct: 351 TPEDAQ 356
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TPEDAQII 9
TP+D Q+I
Sbjct: 2220 TPQDNQLI 2227
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TPEDAQII 9
TP+D Q+I
Sbjct: 2220 TPQDNQLI 2227
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TPEDAQII 9
TP+D Q+I
Sbjct: 2220 TPQDNQLI 2227
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TPEDAQII 9
TP+D Q+I
Sbjct: 2220 TPQDNQLI 2227
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TPEDAQII 9
TP+D Q+I
Sbjct: 2220 TPQDNQLI 2227
>sp|VE6_HPV25|PROTEIN E6|Human papillomavirus 25
Query: 3 PEDAQII 9
PE AQ+I
Sbjct: 13 PEQAQVI 19
>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 TPEDAQ 7
+PEDAQ
Sbjct: 78 SPEDAQ 83
>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 TPEDAQ 7
+PEDAQ
Sbjct: 78 SPEDAQ 83
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 TTPEDAQIIN 10
+TPE+A +++
Sbjct: 800 STPEEAVLLD 809
20|SequenceR|105|96|ANTTLTTPED
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 ANTTLTTPE 9
A TTL++PE
Sbjct: 1107 AKTTLSSPE 1115
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ANTTLTTPED 10
N TLT P D
Sbjct: 575 GNNTLTCPTD 584
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ANTTLTTPED 10
N TLT P D
Sbjct: 575 GNNTLTCPTD 584
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 TTLTTPED 10
TTL PED
Sbjct: 1237 TTLQLPED 1244
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 TLTTPED 10
TLTTPE+
Sbjct: 457 TLTTPEN 463
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 4 TLTTPED 10
TLTTPE+
Sbjct: 457 TLTTPEN 463
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 TLTTPED 10
TLTTPE+
Sbjct: 457 TLTTPEN 463
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ANTTLTTPED 10
N TLT P D
Sbjct: 575 GNKTLTCPTD 584
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 TTLTTPED 10
TTL PED
Sbjct: 1237 TTLQLPED 1244
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 TTLTTPED 10
TTL PED
Sbjct: 1237 TTLQLPED 1244
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ANTTLTTPED 10
N TLT P D
Sbjct: 575 GNLTLTCPTD 584
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 NTTLTTPED 10
NT TTP++
Sbjct: 1256 NTVDTTPKE 1264
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NTTLTTP 8
NTT+T P
Sbjct: 402 NTTITIP 408
21|SequenceR|110|101|SNLDLANTTL
>sp|VE5_HPV16|PROBABLE protein E5|Human papillomavirus type 16
Query: 1 SNLDLANTTL 10
+NLD A+TTL
Sbjct: 2 TNLDTASTTL 11
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 DLANTTL 10
DLAN TL
Sbjct: 220 DLANNTL 226
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 DLANTTL 10
DLAN TL
Sbjct: 220 DLANNTL 226
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 DLANTTL 10
DLAN TL
Sbjct: 220 DLANNTL 226
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 DLANTTL 10
DLAN TL
Sbjct: 220 DLANNTL 226
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 SNLDLANTTL 10
SNLDLA L
Sbjct: 1327 SNLDLAKQLL 1336
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 SNLDLANTTL 10
SNLDLA L
Sbjct: 1330 SNLDLAKQLL 1339
22|SequenceR|115|106|DKGLVSNLDL
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 GLVSNLDL 10
G++SNLDL
Sbjct: 173 GVISNLDL 180
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 2 KGLVSNLDL 10
KGL+ LDL
Sbjct: 508 KGLIKALDL 516
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 KGLVSNLDL 10
KG++ N DL
Sbjct: 147 KGVIDNADL 155
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 2 KGLVSNLDL 10
KG++ N DL
Sbjct: 147 KGVIDNADL 155
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 DKGLVSNLDL 10
D G++ LDL
Sbjct: 412 DNGMMDKLDL 421
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 KGLVSNLDL 10
KGLV N D
Sbjct: 978 KGLVYNYDF 986
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 2 KGLVSNLDL 10
KGL+ +DL
Sbjct: 508 KGLIKAMDL 516
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 GLVSNLDL 10
GLV N+D+
Sbjct: 4730 GLVMNMDV 4737
>sp|E1BS_ADE12|E1B protein, small T-antigen|Human adenovirus A serotype 12
Query: 3 GLVSNLDL 10
GL+++LDL
Sbjct: 60 GLLASLDL 67
23|SequenceR|120|111|KLAGYDKGLV
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 4 GYDKGLV 10
GY++GLV
Sbjct: 76 GYEQGLV 82
>sp|VE6_HPV69|PROTEIN E6|Human papillomavirus 69
Query: 1 KLAGYDKGL 9
++AGY KGL
Sbjct: 127 EIAGYWKGL 135
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 LAGYDKG 8
+AGYD G
Sbjct: 2980 VAGYDGG 2986
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 LAGYDKG 8
+AGYD G
Sbjct: 2979 VAGYDGG 2985
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 LAGYDKG 8
+AGYD G
Sbjct: 2980 VAGYDGG 2986
24|SequenceR|125|116|NIVIDKLAGY
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 IVIDKLAGY 10
++ID LAGY
Sbjct: 1845 VIIDILAGY 1853
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 IVIDKLAGY 10
+++D LAGY
Sbjct: 1848 VIVDVLAGY 1856
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 IVIDKLAGY 10
+++D LAGY
Sbjct: 1851 VIVDILAGY 1859
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 IVIDKLAGY 10
++ID LAGY
Sbjct: 1848 VLIDILAGY 1856
>sp|PG065_VAR67|RNA-BINDING protein OPG065|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 IVIDKLAGY 10
+ +DKL GY
Sbjct: 177 LAVDKLLGY 185
>sp|PG065_VACCC|RNA-BINDING protein OPG065|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 IVIDKLAGY 10
+ +DKL GY
Sbjct: 177 LAVDKLLGY 185
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 3 VIDKLAGY 10
V+D+ GY
Sbjct: 28 VVDRTTGY 35
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 1 NIVIDKL 7
++VIDKL
Sbjct: 221 DVVIDKL 227
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NIVIDKL 7
++VIDKL
Sbjct: 221 DVVIDKL 227
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 1 NIVIDKL 7
++VIDKL
Sbjct: 221 DVVIDKL 227
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 NIVIDKL 7
++VIDKL
Sbjct: 221 DVVIDKL 227
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 NIVIDKL 7
++VIDKL
Sbjct: 221 DVVIDKL 227
25|SequenceR|130|121|SAPNANIVID
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SAPNANIVID 10
S P ANI++D
Sbjct: 1099 SGPKANIIVD 1108
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SAPNANIVID 10
S P ANI++D
Sbjct: 1097 SGPKANIIVD 1106
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SAPNANIVID 10
S P ANI++D
Sbjct: 1099 SGPKANIIVD 1108
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SAPNANIVID 10
S P ANI++D
Sbjct: 1098 SGPKANIIVD 1107
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SAPNANIVID 10
S P NIV+D
Sbjct: 1098 SGPKVNIVVD 1107
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SAPNANIVID 10
S P NI++D
Sbjct: 1099 SGPQVNIIVD 1108
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SAPNANIVID 10
S P NI++D
Sbjct: 1097 SGPQVNIIVD 1106
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SAPNANIVID 10
S P NI++D
Sbjct: 1100 SGPKVNIIVD 1109
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SAPNANIVID 10
S P NI++D
Sbjct: 1100 SGPKVNIIVD 1109
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SAPNANIVID 10
S P NI++D
Sbjct: 1099 SGPKVNIIVD 1108
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SAPNANIVID 10
S P NI++D
Sbjct: 1098 SGPKVNIIVD 1107
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 SAPNANIVID 10
S P NIV D
Sbjct: 1077 SGPEVNIVTD 1086
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SAPNANIVI 9
S+PN +I+I
Sbjct: 440 SSPNVSIII 448
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 1 SAPNANIVI 9
S+PN +I+I
Sbjct: 440 SSPNVSIII 448
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 1 SAPNANIVI 9
S+PN +I+I
Sbjct: 440 SSPNVSIII 448
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 1 SAPNANIVI 9
S+PN +I+I
Sbjct: 440 SSPNVSIII 448
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 1 SAPNANIVI 9
S+PN +I+I
Sbjct: 440 SSPNVSIII 448
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 SAPNANIVI 9
S+PN +I+I
Sbjct: 440 SSPNVSIII 448
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 APNANIVI 9
APN IVI
Sbjct: 764 APNPEIVI 771
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 SAPNANIVID 10
+AP +IVID
Sbjct: 1611 AAPGDSIVID 1620
26|SequenceR|135|126|LSLPPSAPNA
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 3 LPPSAPNA 10
LPPSAP A
Sbjct: 13 LPPSAPVA 20
>sp|UL09_HCMVA|UNCHARACTERIZED protein UL9|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LSLPPS 6
LSLPPS
Sbjct: 42 LSLPPS 47
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 3 LPPSAPNA 10
LPPS P A
Sbjct: 13 LPPSTPVA 20
>sp|NP03_VZVD|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 LPPSAPNA 10
LPPS P A
Sbjct: 5 LPPSVPTA 12
>sp|NP03_VZVO|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Oka
Query: 3 LPPSAPNA 10
LPPS P A
Sbjct: 5 LPPSVPTA 12
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LSLPPSA 7
LS+PP+A
Sbjct: 56 LSIPPTA 62
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LSLPPSA 7
LS+PP+A
Sbjct: 56 LSIPPTA 62
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LSLPPSA 7
LS+PP+A
Sbjct: 56 LSIPPTA 62
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LSLPPSA 7
LS+PP+A
Sbjct: 56 LSIPPTA 62
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LSLPPSA 7
LS+PP+A
Sbjct: 56 LSIPPTA 62
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 3 LPPSAPNA 10
LPPS P A
Sbjct: 13 LPPSTPVA 20
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 3 LPPSAPNA 10
LPPS P A
Sbjct: 13 LPPSTPVA 20
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 LSLPPSAPN 9
+ +PP APN
Sbjct: 718 MYVPPGAPN 726
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 3 LPPSAPNA 10
LPPS P A
Sbjct: 13 LPPSTPVA 20
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 LSLPPSAPN 9
+ +PP APN
Sbjct: 718 MYVPPGAPN 726
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 3 LPPSAPNA 10
LPPS P A
Sbjct: 13 LPPSTPVA 20
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 1 LSLPPSAPNA 10
L LPPS P A
Sbjct: 11 LYLPPSTPVA 20
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 LPPSAPN 9
PPS PN
Sbjct: 551 FPPSYPN 557
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 3 LPPSAPNA 10
LPPS P A
Sbjct: 13 LPPSTPVA 20
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 3 LPPSAPNA 10
LPPS P A
Sbjct: 13 LPPSTPVA 20
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 LSLPPSAPNA 10
L LPP PNA
Sbjct: 392 LDLPPVPPNA 401
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LSLPPSAP 8
+SLP SAP
Sbjct: 45 ISLPVSAP 52
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 LSLPPSAPNA 10
L LPP PNA
Sbjct: 394 LDLPPVPPNA 403
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LSLPPSAP 8
+SLP SAP
Sbjct: 45 ISLPISAP 52
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 3 LPPSAPNA 10
LPPS P A
Sbjct: 13 LPPSTPVA 20
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 3 LPPSAPNA 10
LPPS P A
Sbjct: 13 LPPSTPVA 20
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 LPPSAP 8
+PP+AP
Sbjct: 441 VPPTAP 446
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 3 LPPSAPNA 10
LPPS P A
Sbjct: 42 LPPSTPVA 49
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 3 LPPSAPNA 10
LPPS P A
Sbjct: 14 LPPSTPVA 21
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 LPPSAP 8
+PP+AP
Sbjct: 441 VPPAAP 446
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 LPPSAP 8
+PP+AP
Sbjct: 441 VPPAAP 446
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 LSLPPSAP 8
L +PPS P
Sbjct: 529 LVVPPSTP 536
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 LPPSAPNA 10
+PP PN+
Sbjct: 530 VPPGTPNS 537
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 3 LPPSAPNA 10
LPPS P A
Sbjct: 13 LPPSTPVA 20
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 LPPSAPN 9
+PP+ PN
Sbjct: 529 VPPNTPN 535
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 1 LSLPPSA 7
L+LPPSA
Sbjct: 407 LTLPPSA 413
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 LSLPPSAPNA 10
+S P SAP+
Sbjct: 1050 MSFPQSAPHG 1059
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 3 LPPSAPNA 10
LPPS P A
Sbjct: 13 LPPSTPVA 20
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 LSLPPSAP 8
L +PP AP
Sbjct: 528 LVVPPGAP 535
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 1 LSLPPSA 7
L+LPPSA
Sbjct: 406 LTLPPSA 412
>sp|X_HBVB8|PROTEIN X|Hepatitis B virus genotype B1
Query: 2 SLPPSAPNA 10
+LPP++P+A
Sbjct: 36 ALPPASPSA 44
>sp|X_HBVF1|PROTEIN X|Hepatitis B virus genotype F2
Query: 2 SLPPSAPNA 10
++PPS+P+A
Sbjct: 36 AVPPSSPSA 44
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 4 PPSAPNA 10
PPS P A
Sbjct: 1773 PPSEPEA 1779
>sp|X_HBVB1|PROTEIN X|Hepatitis B virus genotype B1
Query: 2 SLPPSAPNA 10
+LPP++P+A
Sbjct: 36 ALPPASPSA 44
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 SLPPSAP 8
S PPSAP
Sbjct: 2790 SYPPSAP 2796
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 LSLPPSAPNA 10
L +PP PNA
Sbjct: 387 LDVPPVPPNA 396
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 SLPPSAP 8
S PPSAP
Sbjct: 2763 SYPPSAP 2769
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 SLPPSAP 8
S PPSAP
Sbjct: 2768 SYPPSAP 2774
27|SequenceR|140|131|RHLVLLSLPP
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 1 RHLVLLSLPP 10
RHLV + PP
Sbjct: 546 RHLVQIKCPP 555
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 1 RHLVLLSLPP 10
RHL+ + PP
Sbjct: 554 RHLIQIKCPP 563
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 1 RHLVLLSLP 9
RH ++++LP
Sbjct: 275 RHCIMMNLP 283
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RHLVLLSLP 9
RH ++++LP
Sbjct: 275 RHCIMMNLP 283
>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RHLVLLSLP 9
RH ++++LP
Sbjct: 275 RHCIMMNLP 283
>sp|PG181_VACCA|PROTEIN OPG181|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RHLVLLSLP 9
RH ++++LP
Sbjct: 271 RHCIMMNLP 279
>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)
Query: 1 RHLVLLSLP 9
RH ++++LP
Sbjct: 275 RHCIMMNLP 283
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 1 RHLVLLSLPP 10
+HL+ + PP
Sbjct: 550 KHLLQIKCPP 559
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 HLVLLSLPP 10
H +L PP
Sbjct: 423 HFILAKCPP 431
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 HLVLLSLPP 10
H +L PP
Sbjct: 432 HFILAKCPP 440
28|SequenceR|145|136|HECLLRHLVL
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 CLLRHLV 9
C+L HLV
Sbjct: 1798 CVLTHLV 1804
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 HECLLRHLV 9
H CLLR L+
Sbjct: 1668 HICLLRPLL 1676
>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus
Query: 2 ECLLR 6
ECLLR
Sbjct: 118 ECLLR 122
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 2 ECLLR 6
ECLLR
Sbjct: 118 ECLLR 122
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 ECLLR 6
ECLLR
Sbjct: 118 ECLLR 122
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 ECLLR 6
ECLLR
Sbjct: 118 ECLLR 122
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 2 ECLLR 6
ECLLR
Sbjct: 118 ECLLR 122
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 2 ECLLR 6
ECLLR
Sbjct: 118 ECLLR 122
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 2 ECLLR 6
ECLLR
Sbjct: 118 ECLLR 122
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 2 ECLLRH 7
EC+ RH
Sbjct: 394 ECIARH 399
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 HECLLRHLVL 10
EC+ H+VL
Sbjct: 1046 QECVSTHMVL 1055
29|SequenceR|150|141|SLVRFHECLL
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LVRFHECL 9
L+RF ECL
Sbjct: 235 LIRFSECL 242
>sp|V_MUMPZ|NON-STRUCTURAL protein V|Mumps virus genotype N (strain
Query: 4 RFHEC 8
RFH C
Sbjct: 201 RFHSC 205
>sp|V_MUMPS|NON-STRUCTURAL protein V|Mumps virus (strain SBL) (MuV)
Query: 4 RFHEC 8
RFH C
Sbjct: 201 RFHSC 205
>sp|V_MUMPM|NON-STRUCTURAL protein V|Mumps virus genotype B (strain
Query: 4 RFHEC 8
RFH C
Sbjct: 201 RFHSC 205
>sp|V_MUMPJ|NON-STRUCTURAL protein V|Mumps virus genotype A (strain
Query: 4 RFHEC 8
RFH C
Sbjct: 201 RFHSC 205
>sp|V_MUMPE|NON-STRUCTURAL protein V|Mumps virus (strain Enders) (MuV)
Query: 4 RFHEC 8
RFH C
Sbjct: 201 RFHSC 205
>sp|V_MUMP1|NON-STRUCTURAL protein V|Mumps virus (strain SBL-1) (MuV)
Query: 4 RFHEC 8
RFH C
Sbjct: 201 RFHSC 205
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 VRFHEC 8
+RF EC
Sbjct: 1069 IRFEEC 1074
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 VRFHEC 8
+RF EC
Sbjct: 1069 IRFEEC 1074
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 VRFHEC 8
+RF EC
Sbjct: 1065 IRFEEC 1070
>sp|UL05_HCMVM|PROTEIN UL5|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 VRFHEC 8
+RFH+C
Sbjct: 35 LRFHDC 40
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 1 SLVRFHECL 9
SLV H C+
Sbjct: 165 SLVGMHPCM 173
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 3 VRFHECL 9
V+FH C
Sbjct: 168 VQFHACF 174
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 3 VRFHECL 9
V+FH C
Sbjct: 168 VQFHACF 174
30|SequenceR|155|146|HTHVTSLVRF
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 1 HTHVTSLVR 9
H H+ +LVR
Sbjct: 598 HDHLLTLVR 606
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 HTHVTSLVR 9
++HV SL+R
Sbjct: 309 NSHVYSLIR 317
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 HTHVTSLVRF 10
+TH T +RF
Sbjct: 447 YTHWTGSIRF 456
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 THVTSLVRF 10
T +TSLVR
Sbjct: 415 TDITSLVRL 423
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 THVTSLVRF 10
T +TSLVR
Sbjct: 414 TDITSLVRL 422
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 THVTSLVRF 10
T +TSLVR
Sbjct: 414 TDITSLVRL 422
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 THVTSLVR 9
+H TSLVR
Sbjct: 1797 SHQTSLVR 1804
>sp|UNG_VAR67|URACIL-DNA glycosylase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 HVTSLVRF 10
H+T VRF
Sbjct: 147 HITKHVRF 154
>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45
Query: 2 THVTSLVRF 10
TH +SLV F
Sbjct: 243 THPSSLVTF 251
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 HTHVTSLVRF 10
+TH T +RF
Sbjct: 446 YTHWTGSLRF 455
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 HTHVTSLVRF 10
+TH T +RF
Sbjct: 438 YTHWTGSLRF 447
31|SequenceR|160|151|SKVSSHTHVT
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VSSHTHVT 10
V HTHVT
Sbjct: 381 VDGHTHVT 388
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 VSSHTHV 9
VSSH H+
Sbjct: 1029 VSSHNHI 1035
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 VSSHTHV 9
VSSH H+
Sbjct: 1029 VSSHNHI 1035
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 VSSHTHV 9
VSSH H+
Sbjct: 1029 VSSHNHI 1035
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 VSSHTHV 9
VSSH H+
Sbjct: 1029 VSSHNHI 1035
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 VSSHTHV 9
VSSH H+
Sbjct: 1029 VSSHNHI 1035
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 VSSHTHV 9
VSSH H+
Sbjct: 1029 VSSHNHI 1035
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 VSSHTHV 9
VSSH H+
Sbjct: 1029 VSSHNHI 1035
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 VSSHTHV 9
VSSH H+
Sbjct: 1029 VSSHNHI 1035
>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus
Query: 1 SKVSSHTHV 9
SKV HT V
Sbjct: 256 SKVREHTFV 264
>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate
Query: 1 SKVSSHTHV 9
SKV HT V
Sbjct: 256 SKVREHTFV 264
>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 1 SKVSSHTHV 9
SKV HT V
Sbjct: 256 SKVREHTFV 264
>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)
Query: 1 SKVSSHTHV 9
SKV HT V
Sbjct: 256 SKVREHTFV 264
>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 1 SKVSSHTHV 9
SKV HT V
Sbjct: 256 SKVREHTFV 264
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 3 VSSHTHV 9
VSSH H+
Sbjct: 1029 VSSHNHI 1035
32|SequenceR|165|156|LNEPVSKVSS
>sp|PG035_VAR67|PROTEIN OPG035|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LNEPVSKV 8
LN+PV+ V
Sbjct: 59 LNQPVNNV 66
>sp|PG035_MONPV|PROTEIN OPG035|Monkeypox virus (MPXV)
Query: 1 LNEPVSKV 8
LN+PV+ V
Sbjct: 59 LNQPVNNV 66
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 NEPVSKVSS 10
N PV VSS
Sbjct: 1833 NSPVHDVSS 1841
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 3 EPVSKV 8
EP+SKV
Sbjct: 55 EPISKV 60
>sp|PG035_VACCC|PROTEIN OPG035|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LNEPVSKV 8
LN+PV+ +
Sbjct: 59 LNQPVNNI 66
33|SequenceR|170|161|GFCKLLNEPV
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 1 GFCKLLNEP 9
G CKLLN P
Sbjct: 286 GMCKLLNIP 294
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 3 CKLLNEP 9
CKLL+EP
Sbjct: 244 CKLLSEP 250
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CKLLNEP 9
C LLNEP
Sbjct: 458 CPLLNEP 464
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CKLLNEP 9
C LLNEP
Sbjct: 458 CPLLNEP 464
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 GFCKLLNE 8
G C LLNE
Sbjct: 1323 GICSLLNE 1330
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 2 FCKLLNEPV 10
FCK N PV
Sbjct: 40 FCKFSNVPV 48
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 2 FCKLLNEPV 10
FCK N PV
Sbjct: 40 FCKFSNVPV 48
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 3 CKLLNEPV 10
C +LN+PV
Sbjct: 432 CYILNKPV 439
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 3 CKLLNEPV 10
C +LN+PV
Sbjct: 432 CYILNKPV 439
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 CKLLNEPV 10
C +LN+PV
Sbjct: 441 CYVLNKPV 448
>sp|ORF24_TTVV7|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 3 CKLLNEP 9
CK++N P
Sbjct: 233 CKIMNRP 239
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 1 GFCKLLNEP 9
GF LLN P
Sbjct: 303 GFSTLLNVP 311
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 2 FCKLLNEPV 10
+CK N PV
Sbjct: 549 YCKAKNTPV 557
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 2 FCKLLNEPV 10
+CK N PV
Sbjct: 549 YCKAKNTPV 557
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 KLLNEPV 10
KLL EPV
Sbjct: 470 KLLEEPV 476
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 2 FCKLLN 7
FC LLN
Sbjct: 310 FCSLLN 315
>sp|NCAP_VSIVS|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 CKLLNE 8
CK++NE
Sbjct: 164 CKMINE 169
>sp|NCAP_VSIVN|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 CKLLNE 8
CK++NE
Sbjct: 164 CKMINE 169
>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 CKLLNE 8
CK++NE
Sbjct: 164 CKMINE 169
>sp|NCAP_VSIVC|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 CKLLNE 8
CK++NE
Sbjct: 164 CKMINE 169
>sp|NCAP_VSIVA|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 CKLLNE 8
CK++NE
Sbjct: 164 CKMINE 169
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 CKLLNEP 9
CK LN+P
Sbjct: 1987 CKGLNKP 1993
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 GFCKLLNEP 9
G KLLN+P
Sbjct: 1451 GNFKLLNDP 1459
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 CKLLNEP 9
CK LN+P
Sbjct: 1987 CKGLNKP 1993
>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)
Query: 2 FCKLLNEPV 10
FC NEP+
Sbjct: 10 FCYGFNEPL 18
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 2 FCKLLNEP 9
C LLN P
Sbjct: 280 LCTLLNVP 287
>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)
Query: 2 FCKLLNEPV 10
FC NEP+
Sbjct: 10 FCYGFNEPL 18
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 GFCKLLNEP 9
G KL++EP
Sbjct: 1840 GLKKLIDEP 1848
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 GFCKLLNEP 9
G KL++EP
Sbjct: 1840 GLKKLIDEP 1848
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 GFCKLLNEP 9
G KL++EP
Sbjct: 1840 GLKKLIDEP 1848
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 GFCKLLNEP 9
G KL++EP
Sbjct: 1840 GLKKLIDEP 1848
>sp|HEMA_CVHN1|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N1)
Query: 2 FCKLLNEPV 10
FC NEP+
Sbjct: 10 FCYGFNEPL 18
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 4 KLLNEPV 10
K+L EPV
Sbjct: 373 KMLEEPV 379
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 4 KLLNEPV 10
K+L EPV
Sbjct: 373 KMLEEPV 379
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 4 KLLNEPV 10
K+L EPV
Sbjct: 373 KMLEEPV 379
>sp|TEG6_VZVO|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 FCKLLN 7
FC LLN
Sbjct: 96 FCSLLN 101
>sp|TEG6_VZVD|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 FCKLLN 7
FC LLN
Sbjct: 96 FCSLLN 101
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 2 FCKLLNEP 9
C LLN P
Sbjct: 284 LCMLLNVP 291
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 GFCKLLNEP 9
G C L NEP
Sbjct: 70 GRCFLDNEP 78
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 1 GFCKLLNEP 9
G C L NEP
Sbjct: 70 GRCFLDNEP 78
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 3 CKLLNEPV 10
C L N PV
Sbjct: 163 CPLCNTPV 170
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 1 GFCKLLNEP 9
G C L NEP
Sbjct: 70 GRCFLDNEP 78
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 4 KLLNEP 9
KLL+EP
Sbjct: 1425 KLLDEP 1430
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 1 GFCKLLNEP 9
G C L NEP
Sbjct: 70 GRCFLDNEP 78
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 1 GFCKLLNEP 9
G C L NEP
Sbjct: 70 GRCFLDNEP 78
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 2 FCKLLNEP 9
FCK +N P
Sbjct: 231 FCKGVNNP 238
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 2 FCKLLNEP 9
FCK +N P
Sbjct: 231 FCKGVNNP 238
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 2 FCKLLNEP 9
FCK +N P
Sbjct: 231 FCKGVNNP 238
34|SequenceR|175|166|KKNQEGFCKL
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 EGFCKL 10
+GFCKL
Sbjct: 2442 KGFCKL 2447
Query: 3 NQEGFCKL 10
N +GFC L
Sbjct: 4338 NPKGFCDL 4345
>sp|MATRX_RABVP|MATRIX protein|Rabies virus (strain Pasteur vaccins
Query: 1 KKNQEGFC 8
KKN+ FC
Sbjct: 47 KKNRRNFC 54
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 EGFCKL 10
+GFCKL
Sbjct: 2442 KGFCKL 2447
Query: 3 NQEGFCKL 10
N +GFC L
Sbjct: 4338 NPKGFCDL 4345
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 NQEGFCKL 10
N +GFC L
Sbjct: 4315 NPKGFCDL 4322
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 NQEGFCKL 10
N +GFC L
Sbjct: 4315 NPKGFCDL 4322
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 KKNQEGFC 8
KKN FC
Sbjct: 47 KKNMRNFC 54
>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)
Query: 1 KKNQEGFC 8
KKN FC
Sbjct: 47 KKNMRNFC 54
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 KKNQEGFC 8
K +QEG C
Sbjct: 842 KAHQEGVC 849
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 KKNQEGFC 8
K +QEG C
Sbjct: 842 KAHQEGVC 849
>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 KKNQEGFC 8
KKN FC
Sbjct: 47 KKNMRNFC 54
>sp|MATRX_RABVD|MATRIX protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 KKNQEGFC 8
KKN FC
Sbjct: 47 KKNMRNFC 54
>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 KKNQEGFC 8
KKN FC
Sbjct: 47 KKNMRNFC 54
>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)
Query: 1 KKNQEGFC 8
KKN FC
Sbjct: 47 KKNMRNFC 54
>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)
Query: 1 KKNQEGFC 8
KKN FC
Sbjct: 47 KKNMRNFC 54
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 KKNQEGFC 8
KKN FC
Sbjct: 47 KKNMRNFC 54
>sp|MATRX_RABVE|MATRIX protein|Rabies virus (strain ERA) (RABV)
Query: 1 KKNQEGFC 8
KKN FC
Sbjct: 47 KKNMRNFC 54
>sp|MATRX_RABVR|MATRIX protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 KKNQEGFC 8
KKN FC
Sbjct: 47 KKNMRNFC 54
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 EGFCKL 10
+G+CKL
Sbjct: 5966 DGYCKL 5971
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 KNQEGFC 8
K+Q+G C
Sbjct: 3355 KSQDGLC 3361
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 KNQEGFC 8
K+Q+G C
Sbjct: 3355 KSQDGLC 3361
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 6 GFCKL 10
GFC+L
Sbjct: 965 GFCRL 969
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 6 GFCKL 10
GFC+L
Sbjct: 965 GFCRL 969
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 6 GFCKL 10
GFC+L
Sbjct: 965 GFCRL 969
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 KKNQEGFCKL 10
K ++EG C L
Sbjct: 839 KAHKEGVCGL 848
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 KKNQEGFCKL 10
K ++EG C L
Sbjct: 839 KAHKEGVCGL 848
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 KKNQEGF 7
+K+Q+GF
Sbjct: 533 RKHQDGF 539
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 KKNQEGF 7
+K+Q+GF
Sbjct: 533 RKHQDGF 539
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 5 EGFCKL 10
EG CK+
Sbjct: 232 EGICKM 237
>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 KKNQEGFC 8
K+N FC
Sbjct: 47 KRNMRNFC 54
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 KKNQEG 6
KKNQ G
Sbjct: 912 KKNQHG 917
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 KKNQEGFCKL 10
KK+ FCK+
Sbjct: 415 KKSNNIFCKI 424
35|SequenceR|180|171|DQRPQKKNQE
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 RPQKKNQ 9
+PQK+NQ
Sbjct: 6 KPQKRNQ 12
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 RPQKKNQ 9
+PQKKN+
Sbjct: 6 KPQKKNK 12
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 2 QRPQKKNQE 10
+RP+ +NQE
Sbjct: 232 KRPKVRNQE 240
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 RPQKKNQE 10
RP+++N+E
Sbjct: 1123 RPKRENEE 1130
>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983
Query: 2 QRPQKKNQE 10
+RP+ +NQE
Sbjct: 233 KRPKVRNQE 241
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QRPQKKNQE 10
++PQKKN++
Sbjct: 268 EQPQKKNKK 276
>sp|E3GL_ADE03|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 3
Query: 3 RPQKKNQE 10
RP++ N+E
Sbjct: 160 RPRQSNEE 167
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 4 PQKKNQE 10
PQ+K+QE
Sbjct: 885 PQEKSQE 891
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 1 DQRPQKKNQ 9
D+RP KK++
Sbjct: 200 DKRPDKKDE 208
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 1 DQRPQKKNQ 9
D+RP KK++
Sbjct: 200 DKRPDKKDE 208
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 2 QRPQKKN 8
QRP+ KN
Sbjct: 80 QRPESKN 86
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 3 RPQKKNQE 10
RP +NQE
Sbjct: 1174 RPNPRNQE 1181
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 4 PQKKNQE 10
P+KKN+E
Sbjct: 506 PKKKNKE 512
36|SequenceR|185|176|FGLQYDQRPQ
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 FGLQYDQRP 9
+GL+Y+Q P
Sbjct: 481 YGLRYEQTP 489
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FGLQYDQRPQ 10
FG++ Q+PQ
Sbjct: 670 FGIRGKQQPQ 679
>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)
Query: 1 FGLQYDQRP 9
F L YDQ P
Sbjct: 326 FVLDYDQSP 334
>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)
Query: 1 FGLQYDQRP 9
F L YDQ P
Sbjct: 326 FVLDYDQSP 334
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 1 FGLQYDQRP 9
GL+YD P
Sbjct: 504 LGLRYDLHP 512
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 GLQYDQRP 9
GLQ D RP
Sbjct: 289 GLQQDWRP 296
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 1 FGLQYDQRP 9
G+QY+Q P
Sbjct: 532 LGIQYEQGP 540
>sp|YVBB_VACCC|UNCHARACTERIZED 7.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FGLQYDQR 8
FGL +D R
Sbjct: 31 FGLLFDSR 38
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 1 FGLQYDQRPQ 10
G YD+ PQ
Sbjct: 249 LGGTYDKNPQ 258
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 1 FGLQYDQRP 9
F L YDQ P
Sbjct: 325 FILDYDQSP 333
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 1 FGLQYDQRP 9
F L YDQ P
Sbjct: 325 FILDYDQSP 333
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 1 FGLQYDQRP 9
F L YDQ P
Sbjct: 325 FILDYDQSP 333
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 1 FGLQYDQRP 9
F L YDQ P
Sbjct: 325 FILDYDQSP 333
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 1 FGLQYDQRP 9
F L YDQ P
Sbjct: 325 FILDYDQSP 333
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 1 FGLQYDQRP 9
F L YDQ P
Sbjct: 325 FILDYDQSP 333
>sp|YVAR_VACCC|UNCHARACTERIZED 8.5 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FGLQYDQR 8
F +QYD+R
Sbjct: 8 FRIQYDRR 15
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 2 GLQYDQR 8
G+Q DQR
Sbjct: 373 GIQLDQR 379
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 3 LQYDQRPQ 10
LQ+ +RPQ
Sbjct: 111 LQFYKRPQ 118
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 3 LQYDQRPQ 10
LQ+ +RPQ
Sbjct: 111 LQFYKRPQ 118
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 3 LQYDQRPQ 10
LQ+ +RPQ
Sbjct: 111 LQFYKRPQ 118
>sp|CEP3_EBVB9|CYTOPLASMIC envelopment protein 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GLQYDQ 7
GL+YD+
Sbjct: 54 GLEYDE 59
>sp|CEP3_EBVA8|CYTOPLASMIC envelopment protein 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GLQYDQ 7
GL+YD+
Sbjct: 54 GLEYDE 59
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 2 GLQYDQR 8
G+Q DQR
Sbjct: 373 GIQLDQR 379
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 2 GLQYDQR 8
G+Q DQR
Sbjct: 334 GIQLDQR 340
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 2 GLQYDQR 8
G+Q DQR
Sbjct: 373 GIQLDQR 379
>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 QYDQRPQ 10
QY+ RPQ
Sbjct: 138 QYECRPQ 144
>sp|US07_HCMVA|UNIQUE short US7 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 QYDQRPQ 10
QY+ RPQ
Sbjct: 138 QYECRPQ 144
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 2 GLQYDQR 8
G+Q DQR
Sbjct: 377 GIQLDQR 383
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 2 GLQYDQR 8
G+Q DQR
Sbjct: 377 GIQLDQR 383
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 2 GLQYDQR 8
G+Q DQR
Sbjct: 377 GIQLDQR 383
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 GLQYDQR 8
G+Q DQR
Sbjct: 377 GIQLDQR 383
>sp|NCAP_PUUMK|NUCLEOPROTEIN virus (strain K27)
Query: 2 GLQYDQR 8
G+Q DQR
Sbjct: 377 GIQLDQR 383
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 2 GLQYDQR 8
G+Q DQR
Sbjct: 377 GIQLDQR 383
37|SequenceR|190|181|KWILTFGLQY
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 3 ILTFGLQY 10
+LTFG QY
Sbjct: 256 MLTFGFQY 263
>sp|NEF_HV1Y2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 KWILTFG 7
+W LTFG
Sbjct: 143 RWPLTFG 149
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 KW---ILTFGLQY 10
KW +L FG QY
Sbjct: 251 KWHSVMLKFGFQY 263
>sp|RUVV_VACCC|RESOLVASE OPG149|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 WILTFGLQ 9
W+ TFGL+
Sbjct: 123 WMDTFGLR 130
>sp|RUVV_VACCA|HOLLIDAY junction resolvase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 WILTFGLQ 9
W+ TFGL+
Sbjct: 134 WMDTFGLR 141
>sp|RUVV_MONPV|RESOLVASE OPG149|Monkeypox virus (MPXV)
Query: 2 WILTFGLQ 9
W+ TFGL+
Sbjct: 134 WMDTFGLR 141
>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 WILTFG 7
W LTFG
Sbjct: 13 WWLTFG 18
>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 WILTFG 7
W LTFG
Sbjct: 13 WWLTFG 18
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 KWILTFG 7
+W+++FG
Sbjct: 627 RWLVSFG 633
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 KWILTFG 7
+W+++FG
Sbjct: 630 RWLVSFG 636
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 KWILTFG 7
+W+++FG
Sbjct: 631 RWLVSFG 637
>sp|YL14_ADE41|UNCHARACTERIZED 7.3 kDa protein in|Human adenovirus F serotype 41
Query: 6 FGLQY 10
FGLQY
Sbjct: 49 FGLQY 53
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 KWILTFGLQY 10
+W+ +FG Y
Sbjct: 165 QWVPSFGPWY 174
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 KWILTFGLQY 10
+W+ +FG Y
Sbjct: 165 QWVPSFGPWY 174
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 KWILTFGLQY 10
+W+ +FG Y
Sbjct: 165 QWVPSFGPWY 174
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 2 WILTF 6
WILT+
Sbjct: 179 WILTY 183
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 TFGLQY 10
TFGL Y
Sbjct: 2825 TFGLSY 2830
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 3 ILTFGL 8
I+TFGL
Sbjct: 929 IITFGL 934
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 5 TFGLQY 10
TFGL Y
Sbjct: 2825 TFGLSY 2830
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 WILTFGL 8
WI+ FG
Sbjct: 153 WIVPFGF 159
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 WILTFGL 8
WI+ FG
Sbjct: 153 WIVPFGF 159
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 WILTFGL 8
WI+ FG
Sbjct: 153 WIVPFGF 159
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 WILTFGL 8
WI+ FG
Sbjct: 153 WIVPFGF 159
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 WILTFGL 8
WI+ FG
Sbjct: 153 WIVPFGF 159
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 WILTFGL 8
WI+ FG
Sbjct: 153 WIVPFGF 159
38|SequenceR|195|186|TKPVNKWILT
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 4 VNKWILT 10
+N+WI+T
Sbjct: 105 LNRWIMT 111
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TKPVNKWILT 10
T PV K+I+T
Sbjct: 1638 THPVTKYIMT 1647
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2824 PVNSWL 2829
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 TKPVNKWILT 10
T PV K+I+T
Sbjct: 1638 THPVTKYIMT 1647
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2824 PVNSWL 2829
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TKPVNKWILT 10
T P ++WI T
Sbjct: 202 TAPRDEWIFT 211
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 TKPVNKWILT 10
T P+ K+I+T
Sbjct: 1639 THPITKYIMT 1648
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2828 PVNSWL 2833
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 TKPVNKWILT 10
T P+ K+I+T
Sbjct: 1636 THPITKYIMT 1645
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2826 PVNSWL 2831
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TKPVNKWILT 10
T P+ K+I+T
Sbjct: 1643 THPITKYIMT 1652
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2832 PVNSWL 2837
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 TKPVNKWILT 10
T P+ K+I+T
Sbjct: 1643 THPITKYIMT 1652
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2832 PVNSWL 2837
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 TKPVNKWILT 10
T P+ K+I+T
Sbjct: 1638 THPITKYIMT 1647
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2824 PVNSWL 2829
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 TKPVNKWILT 10
T P+ K+I+T
Sbjct: 1640 THPITKYIMT 1649
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2829 PVNSWL 2834
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TKPVNKWILT 10
T P+ K+I+T
Sbjct: 1642 THPITKYIMT 1651
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2831 PVNSWL 2836
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 PVNKWIL 9
PVN W+L
Sbjct: 77 PVNYWML 83
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 3 PVNKWIL 9
PV KW+
Sbjct: 451 PVKKWLF 457
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 TKPVNKWIL 9
T P++ WIL
Sbjct: 75 TPPIDYWIL 83
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 TKPVNKWIL 9
T P++ WIL
Sbjct: 75 TPPIDYWIL 83
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 TKPVNKWIL 9
TKP KW L
Sbjct: 4654 TKPYIKWDL 4662
Query: 3 PVNKW 7
P NKW
Sbjct: 4897 PFNKW 4901
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 PVNKWIL 9
P+N W+L
Sbjct: 77 PINYWML 83
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 PVNKW 7
P NKW
Sbjct: 4874 PFNKW 4878
Query: 2 KPVNKWIL 9
KP+ KW L
Sbjct: 4632 KPLIKWDL 4639
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 4 VNKWILT 10
+N WI+T
Sbjct: 1591 INHWIIT 1597
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2836 PVNSWL 2841
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2823 PVNSWL 2828
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2834 PVNSWL 2839
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2834 PVNSWL 2839
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 2 KPVNKWI 8
KP NK++
Sbjct: 38 KPANKYV 44
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2823 PVNSWL 2828
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 TKPVNKWILT 10
T PV K+I T
Sbjct: 1643 THPVTKYIAT 1652
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2832 PVNSWL 2837
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2827 PVNSWL 2832
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2823 PVNSWL 2828
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2824 PVNSWL 2829
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2824 PVNSWL 2829
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2823 PVNSWL 2828
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2823 PVNSWL 2828
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 TKPVNKWILT 10
T PV K+I T
Sbjct: 1642 THPVTKYIAT 1651
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2846 PVNSWL 2851
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2823 PVNSWL 2828
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 TKPVNKWILT 10
T PV K+I T
Sbjct: 1642 THPVTKYIAT 1651
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2846 PVNSWL 2851
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2835 PVNSWL 2840
Query: 1 TKPVNKWIL 9
T PV K+I+
Sbjct: 1642 THPVTKYIM 1650
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2827 PVNSWL 2832
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 TKPVNKWILT 10
T PV K+I T
Sbjct: 1642 THPVTKYIAT 1651
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2846 PVNSWL 2851
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 TKPVNKWILT 10
T PV K+I T
Sbjct: 1642 THPVTKYIAT 1651
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2846 PVNSWL 2851
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 TKPVNKWILT 10
T PV K+I T
Sbjct: 1642 THPVTKYIAT 1651
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2850 PVNSWL 2855
>sp|SPIKE_ADE15|FIBER protein|Human adenovirus D serotype 15
Query: 1 TKPVNKWI 8
TKP NK I
Sbjct: 295 TKPTNKEI 302
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 PVNKWI 8
PVN W+
Sbjct: 2821 PVNSWL 2826
>sp|US21_HCMVM|MEMBRANE protein US21|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PVNKWIL 9
P N WIL
Sbjct: 76 PKNVWIL 82
>sp|US21_HCMVA|UNCHARACTERIZED protein HWLF2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PVNKWIL 9
P N WIL
Sbjct: 76 PKNVWIL 82
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 KPVNKWILT 10
KP+ +W LT
Sbjct: 4641 KPLIEWPLT 4649
>sp|VPR_HV1SC|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 2 KPVNKWIL 9
+P N+W L
Sbjct: 13 EPYNEWTL 20
>sp|VPR_HV1VI|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 2 KPVNKWIL 9
+P N+W L
Sbjct: 13 EPYNEWAL 20
>sp|VPR_HV193|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 2 KPVNKWIL 9
+P N+W L
Sbjct: 13 EPYNEWTL 20
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 3 PVNKWIL 9
P N W L
Sbjct: 231 PFNNWFL 237
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PVNKWI 8
P+N W+
Sbjct: 2823 PINSWL 2828
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 TKPVNKW 7
T P+N W
Sbjct: 967 TTPLNPW 973
>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 TKPVNKWI 8
T NKWI
Sbjct: 178 TDEANKWI 185
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 PVNKWI 8
P+N W+
Sbjct: 2846 PINSWL 2851
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 KPVNKWI 8
KP N WI
Sbjct: 933 KPTNIWI 939
>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 1 TKPVNKWI 8
T NKWI
Sbjct: 178 TDEANKWI 185
>sp|VP7_ROTAM|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 TKPVNKWI 8
T NKWI
Sbjct: 178 TDEANKWI 185
>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 TKPVNKWI 8
T NKWI
Sbjct: 178 TDEANKWI 185
>sp|VP7_ROTHP|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 TKPVNKWI 8
T NKWI
Sbjct: 178 TDEANKWI 185
>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 1 TKPVNKWI 8
T NKWI
Sbjct: 178 TDEANKWI 185
>sp|VP7_ROTH3|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 TKPVNKWI 8
T NKWI
Sbjct: 178 TDEANKWI 185
>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 TKPVNKWI 8
T NKWI
Sbjct: 178 TNEANKWI 185
>sp|VP7_ROTYO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 TKPVNKWI 8
T NKWI
Sbjct: 178 TDEANKWI 185
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 1 TKPVNKWILT 10
T PV+ W T
Sbjct: 456 TSPVSNWEFT 465
39|SequenceR|200|191|SFKMQTKPVN
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 2 FKMQTKPVN 10
FK +TKPV+
Sbjct: 215 FKPETKPVS 223
>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15
Query: 1 SFKMQTKP 8
SF+MQT P
Sbjct: 230 SFEMQTWP 237
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SFKMQTKPVN 10
+F M T P N
Sbjct: 22 AFSMATAPTN 31
>sp|SPIKE_ADE15|FIBER protein|Human adenovirus D serotype 15
Query: 1 SFKMQTKPVN 10
++ QTKP N
Sbjct: 290 AYPKQTKPTN 299
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 1 SFKMQTKPVN 10
+F M T P N
Sbjct: 22 AFSMATAPTN 31
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 2 FKMQTKPVN 10
FK KP+N
Sbjct: 246 FKQSPKPIN 254
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FKMQTKPVN 10
FK KP+N
Sbjct: 246 FKQSPKPIN 254
40|SequenceR|205|196|CMTQISFKMQ
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 1 CMTQISF 7
CM+ ISF
Sbjct: 488 CMSLISF 494
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 1 CMTQISF 7
CM+ ISF
Sbjct: 488 CMSLISF 494
41|SequenceR|210|201|EGEIPCMTQI
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EGEIPCMTQI 10
EGEI C + I
Sbjct: 427 EGEIQCTSNI 436
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 IPCMTQI 10
IPC+T +
Sbjct: 21 IPCITNV 27
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 IPCMTQI 10
IPC+T +
Sbjct: 21 IPCITNV 27
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 GEIPC 6
GE+PC
Sbjct: 6479 GELPC 6483
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 GEIPC 6
GE+PC
Sbjct: 6499 GELPC 6503
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 GEIPC 6
GE+PC
Sbjct: 6529 GELPC 6533
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 EIPCMTQ 9
E+P MTQ
Sbjct: 1061 EVPWMTQ 1067
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 1 EGEIPCMTQ 9
EG PC+ Q
Sbjct: 482 EGRRPCVCQ 490
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 GEIPC 6
GE+PC
Sbjct: 6441 GEMPC 6445
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 EIPCMT 8
EIPC T
Sbjct: 483 EIPCTT 488
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EGEIPCMTQI 10
EG+I C + I
Sbjct: 434 EGQIRCSSNI 443
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 3 EIPCMT 8
EIPC T
Sbjct: 483 EIPCTT 488
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EGEIPCMTQI 10
EG+I C + I
Sbjct: 440 EGQIRCSSNI 449
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EGEIPCMTQI 10
EG+I C + I
Sbjct: 439 EGQINCSSNI 448
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EGEIPCMTQI 10
EG+I C + I
Sbjct: 452 EGQIRCSSNI 461
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 EGEIPC 6
EG PC
Sbjct: 2260 EGSFPC 2265
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EGEIPCMTQI 10
EG+I C + I
Sbjct: 437 EGQINCSSNI 446
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 EGEIPC 6
EG PC
Sbjct: 2260 EGSFPC 2265
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 2 GEIPCMT 8
GE+ C T
Sbjct: 287 GEVACFT 293
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 3 EIPCMT 8
E+PC T
Sbjct: 482 EVPCTT 487
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 1 EGEIPCMTQ 9
EGE+ C +
Sbjct: 281 EGEVECYNK 289
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 3 EIPCMT 8
E+PC T
Sbjct: 482 EVPCTT 487
42|SequenceR|215|206|RAINGEGEIP
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 AINGEGEIP 10
A+ GEGEIP
Sbjct: 1371 ALTGEGEIP 1379
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 AINGEGEIP 10
A+ EGEIP
Sbjct: 1372 ALGSEGEIP 1380
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 AINGEGEIP 10
A+ EGEIP
Sbjct: 1372 ALGSEGEIP 1380
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 RAINGEGEIP 10
+A +GE E+P
Sbjct: 1060 KAYHGEAEVP 1069
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 RAINGEGEIP 10
+A +GE E+P
Sbjct: 1060 KAYHGEAEVP 1069
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 AINGEGEIP 10
A+ EGEIP
Sbjct: 1367 ALPSEGEIP 1375
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 AINGEGEIP 10
A+ EGEIP
Sbjct: 1367 ALPSEGEIP 1375
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 RAINGE 6
RAING+
Sbjct: 2852 RAINGD 2857
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 RAINGE 6
RAING+
Sbjct: 2852 RAINGD 2857
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 3 INGEGEIP 10
I EG+IP
Sbjct: 348 IENEGKIP 355
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 3 INGEGEIP 10
I EG+IP
Sbjct: 348 IENEGKIP 355
43|SequenceR|220|211|LSFLFRAING
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 SFLFRAING 10
SFL AING
Sbjct: 1066 SFLGTAING 1074
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 SFLFRAING 10
SFL A+NG
Sbjct: 1069 SFLATAVNG 1077
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 LSFLFRA 7
+SF+FRA
Sbjct: 1237 VSFIFRA 1243
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 LSFLFRA 7
+SF+FRA
Sbjct: 1237 VSFIFRA 1243
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 LSFLFRA 7
+SF+FRA
Sbjct: 1233 VSFIFRA 1239
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 SFLFRAING 10
SFL A+NG
Sbjct: 1068 SFLGTAVNG 1076
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 SFLFRAING 10
SFL +ING
Sbjct: 1073 SFLATSING 1081
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 SFLFRAING 10
SFL ING
Sbjct: 1073 SFLATTING 1081
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 SFLFRAING 10
SFL ING
Sbjct: 1068 SFLATCING 1076
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 SFLFRAING 10
SFL ING
Sbjct: 1068 SFLATCING 1076
44|SequenceR|225|216|HKQGFLSFLF
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 HKQGFLS 7
H++GFLS
Sbjct: 306 HREGFLS 312
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 HKQGFLS 7
H++GFLS
Sbjct: 306 HREGFLS 312
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 HKQGFLS 7
H++GFLS
Sbjct: 306 HREGFLS 312
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 HKQGFLS 7
H++GFLS
Sbjct: 306 HREGFLS 312
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 HKQGFLSFLF 10
++QG +SF+F
Sbjct: 158 YRQGNISFIF 167
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 HKQGFLSFLF 10
++QG +SF+F
Sbjct: 158 YRQGNISFIF 167
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 QGFLSFL 9
QGF+SF
Sbjct: 45 QGFISFF 51
>sp|VE8E2_HPV13|PROTEIN E8^E2C|Human papillomavirus 13
Query: 1 HKQGFLSF 8
HK GF+S
Sbjct: 177 HKLGFMSL 184
>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b
Query: 1 HKQGFLSF 8
HK GF+S
Sbjct: 358 HKLGFMSL 365
>sp|VE2_HPV6A|REGULATORY protein E2|Human papillomavirus type 6a
Query: 1 HKQGFLSF 8
HK GF+S
Sbjct: 358 HKLGFMSL 365
>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13
Query: 1 HKQGFLSF 8
HK GF+S
Sbjct: 367 HKLGFMSL 374
>sp|VE8E2_HPV11|PROTEIN E8^E2C|Human papillomavirus 11
Query: 1 HKQGFLSF 8
HK GF+S
Sbjct: 167 HKVGFMSL 174
>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11
Query: 1 HKQGFLSF 8
HK GF+S
Sbjct: 357 HKVGFMSL 364
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 HKQGFLSFLF 10
HK +LS LF
Sbjct: 142 HKNRYLSALF 151
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 HKQGFLSFLF 10
HK +LS LF
Sbjct: 142 HKNRYLSALF 151
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 KQGFLSFLF 10
+QG +SF F
Sbjct: 485 RQGIVSFSF 493
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HKQGFL 6
H++GFL
Sbjct: 308 HREGFL 313
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HKQGFL 6
H++GFL
Sbjct: 308 HREGFL 313
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HKQGFL 6
H++GFL
Sbjct: 308 HREGFL 313
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HKQGFL 6
H++GFL
Sbjct: 308 HREGFL 313
>sp|UL79_HHV6U|PROTEIN U52|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HKQGFLSFL 9
HK G SFL
Sbjct: 213 HKAGLFSFL 221
>sp|UL79_HHV6Z|PROTEIN U52|Human herpesvirus 6B (strain Z29)
Query: 1 HKQGFLSFL 9
HK G SFL
Sbjct: 213 HKAGLFSFL 221
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 KQGFLSF 8
KQ FL+F
Sbjct: 1983 KQSFLAF 1989
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 KQGFLSF 8
KQ FL+F
Sbjct: 1956 KQSFLAF 1962
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 KQGFLSF 8
KQ FL+F
Sbjct: 1961 KQSFLAF 1967
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 HKQGFL 6
HK+GF+
Sbjct: 306 HKEGFV 311
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 KQGFLSFLF 10
+QG +SF F
Sbjct: 484 RQGIVSFNF 492
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 4 GFLSFL 9
GFLS+L
Sbjct: 468 GFLSYL 473
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 5 FLSFLF 10
FLSFL+
Sbjct: 1200 FLSFLY 1205
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 2 KQGFLSFLF 10
K+G L+FL
Sbjct: 231 KRGILTFLL 239
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 GFLSFLF 10
GFL +LF
Sbjct: 2231 GFLKWLF 2237
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 GFLSFLF 10
GFL +LF
Sbjct: 2201 GFLKWLF 2207
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 GFLSFLF 10
GFL +LF
Sbjct: 2231 GFLKWLF 2237
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 GFLSFLF 10
GFL +LF
Sbjct: 2181 GFLKWLF 2187
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 GFLSFLF 10
GFL +LF
Sbjct: 2201 GFLKWLF 2207
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 GFLSFLF 10
GFL +LF
Sbjct: 2181 GFLKWLF 2187
45|SequenceR|230|221|ANVANHKQGF
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 VANHKQGF 10
V +HK+GF
Sbjct: 303 VTHHKEGF 310
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 3 VANHKQGF 10
VANHK+ F
Sbjct: 646 VANHKRYF 653
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 VANHKQGF 10
VANHK+ F
Sbjct: 646 VANHKRYF 653
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ANVANHKQG 9
+NVA H +G
Sbjct: 349 SNVAEHTRG 357
>sp|V_MUMP1|NON-STRUCTURAL protein V|Mumps virus (strain SBL-1) (MuV)
Query: 2 NVANH 6
NVANH
Sbjct: 19 NVANH 23
>sp|V_MUMPM|NON-STRUCTURAL protein V|Mumps virus genotype B (strain
Query: 2 NVANH 6
NVANH
Sbjct: 19 NVANH 23
>sp|PHOSP_MUMPM|PHOSPHOPROTEIN virus genotype B (strain
Query: 2 NVANH 6
NVANH
Sbjct: 19 NVANH 23
>sp|PHOSP_MUMP1|PHOSPHOPROTEIN virus (strain SBL-1) (MuV)
Query: 2 NVANH 6
NVANH
Sbjct: 19 NVANH 23
>sp|V_MUMPS|NON-STRUCTURAL protein V|Mumps virus (strain SBL) (MuV)
Query: 2 NVANH 6
NVANH
Sbjct: 19 NVANH 23
>sp|PHOSP_MUMPS|PHOSPHOPROTEIN virus (strain SBL) (MuV)
Query: 2 NVANH 6
NVANH
Sbjct: 19 NVANH 23
>sp|PHOSP_MUMPE|PHOSPHOPROTEIN virus (strain Enders) (MuV)
Query: 2 NVANH 6
NVANH
Sbjct: 19 NVANH 23
>sp|V_MUMPE|NON-STRUCTURAL protein V|Mumps virus (strain Enders) (MuV)
Query: 2 NVANH 6
NVANH
Sbjct: 19 NVANH 23
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 ANVANHKQG 9
N NH QG
Sbjct: 309 GNNTNHSQG 317
>sp|VITF3_MONPV|INTERMEDIATE transcription factor 3 large|Monkeypox virus (MPXV)
Query: 1 ANVANH 6
ANV NH
Sbjct: 262 ANVVNH 267
>sp|V_MUMPZ|NON-STRUCTURAL protein V|Mumps virus genotype N (strain
Query: 2 NVANH 6
NVANH
Sbjct: 19 NVANH 23
>sp|PHOSP_MUMPJ|PHOSPHOPROTEIN virus genotype A (strain
Query: 2 NVANH 6
NVANH
Sbjct: 19 NVANH 23
>sp|V_MUMPJ|NON-STRUCTURAL protein V|Mumps virus genotype A (strain
Query: 2 NVANH 6
NVANH
Sbjct: 19 NVANH 23
>sp|VTF3L_MONPZ|INTERMEDIATE transcription factor 3 large|Monkeypox virus (strain Zaire-96-I-16)
Query: 1 ANVANH 6
ANV NH
Sbjct: 262 ANVVNH 267
>sp|PHOSP_MUMPZ|PHOSPHOPROTEIN virus genotype N (strain
Query: 2 NVANH 6
NVANH
Sbjct: 19 NVANH 23
>sp|VITF3_VARV|INTERMEDIATE transcription factor 3 large|Variola virus
Query: 1 ANVANH 6
ANV NH
Sbjct: 262 ANVVNH 267
>sp|VITF3_VAR67|INTERMEDIATE transcription factor 3 large|Variola virus (isolate
Query: 1 ANVANH 6
ANV NH
Sbjct: 262 ANVVNH 267
>sp|VTF3L_VACCT|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Tian Tan)
Query: 1 ANVANH 6
ANV NH
Sbjct: 262 ANVVNH 267
>sp|VTF3L_VACCA|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Ankara) (VACV)
Query: 1 ANVANH 6
ANV NH
Sbjct: 262 ANVVNH 267
>sp|VITF3_VACCC|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Copenhagen)
Query: 1 ANVANH 6
ANV NH
Sbjct: 262 ANVVNH 267
>sp|I_MUMPZ|I virus genotype N (strain
Query: 2 NVANH 6
NVANH
Sbjct: 19 NVANH 23
>sp|I_MUMPJ|I virus genotype A (strain
Query: 2 NVANH 6
NVANH
Sbjct: 19 NVANH 23
46|SequenceR|235|226|SDILTANVAN
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 SDILTANVA 9
SD++T+N+A
Sbjct: 1501 SDVMTSNIA 1509
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 DILTAN 7
DILTAN
Sbjct: 398 DILTAN 403
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 ILTANVAN 10
I+T N+AN
Sbjct: 588 IITTNLAN 595
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 SDILTANVA 9
+DILTA ++
Sbjct: 224 NDILTAEIS 232
>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United
Query: 1 SDILTANV 8
+DIL ANV
Sbjct: 122 NDILNANV 129
47|SequenceR|240|231|AIDVWSDILT
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 AIDVWSDIL 9
A+D+WS L
Sbjct: 286 AVDLWSSFL 294
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 1 AIDVWSDILT 10
AI WS++LT
Sbjct: 612 AILTWSNLLT 621
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 AIDVWSDI 8
A+ VW+DI
Sbjct: 586 AVSVWTDI 593
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AIDVWS 6
A+D+WS
Sbjct: 262 AVDIWS 267
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 AIDVWSDIL 9
A+D+W+ L
Sbjct: 356 AVDLWTSFL 364
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas)
Query: 1 AIDVWSDILT 10
A+DVW+ + T
Sbjct: 32 AVDVWNVMYT 41
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 1 AIDVWSDIL 9
A+D++SD L
Sbjct: 203 AVDIYSDNL 211
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 2 IDVWS 6
ID+WS
Sbjct: 363 IDIWS 367
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 2 IDVWS 6
ID+WS
Sbjct: 229 IDIWS 233
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 1 AIDVWSDIL 9
++DVW D +
Sbjct: 40 SVDVWLDAI 48
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 1 AIDVWSDIL 9
++DVW D +
Sbjct: 40 SVDVWLDAI 48
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 1 AIDVWSDIL 9
+I +W D+L
Sbjct: 226 SISLWPDLL 234
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 1 AIDVWSDIL 9
++DVW D +
Sbjct: 40 SVDVWLDAI 48
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 5 WSDIL 9
WSD+L
Sbjct: 1121 WSDVL 1125
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 5 WSDIL 9
WSD+L
Sbjct: 1121 WSDVL 1125
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 5 WSDIL 9
WSD+L
Sbjct: 1121 WSDVL 1125
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 5 WSDIL 9
WSD+L
Sbjct: 1121 WSDVL 1125
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 IDVWSDILT 10
I WS++LT
Sbjct: 586 IITWSNLLT 594
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 5 WSDILT 10
W++ILT
Sbjct: 321 WTEILT 326
Query: 1 AIDVWSDILT 10
A+D+W+ + T
Sbjct: 32 AVDLWNVMYT 41
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 5 WSDILT 10
W++ILT
Sbjct: 321 WTEILT 326
Query: 1 AIDVWSDILT 10
A+D+W+ + T
Sbjct: 32 AVDLWNVMYT 41
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 AIDVWSD 7
++DVW D
Sbjct: 312 SVDVWMD 318
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 VWSDIL 9
VW+D+L
Sbjct: 2546 VWADLL 2551
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 AIDVWSD 7
++DVW D
Sbjct: 321 SVDVWLD 327
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 1 AIDVW 5
A+DVW
Sbjct: 9 ALDVW 13
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 1 AIDVW 5
A+DVW
Sbjct: 9 ALDVW 13
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 AIDVWSD 7
++DVW D
Sbjct: 321 SVDVWLD 327
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 VWSDILT 10
+W ++LT
Sbjct: 263 IWEEVLT 269
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 VWSDILT 10
+W ++LT
Sbjct: 263 IWEEVLT 269
>sp|PG061_VACCP|PROTEIN OPG061|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 DVWSDIL 9
D W+D++
Sbjct: 53 DTWTDVI 59
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 1 AIDVWSDILT 10
A+D+W+ + T
Sbjct: 32 AVDLWNVMYT 41
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 1 AIDVWSDILT 10
A+D+W+ + T
Sbjct: 32 AVDLWNVMYT 41
>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)
Query: 2 IDVWS 6
+D+WS
Sbjct: 363 VDIWS 367
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 1 AIDVWSDIL 9
++DVW D +
Sbjct: 40 SMDVWLDAI 48
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 1 AIDVWSDILT 10
A+D+W+ + T
Sbjct: 32 AVDLWNVMYT 41
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 1 AIDVWSD 7
++DVW D
Sbjct: 320 SLDVWLD 326
48|SequenceR|245|236|KLQFIAIDVW
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 5 IAIDVW 10
IA+D+W
Sbjct: 31 IAVDLW 36
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 5 IAIDVW 10
IA+D+W
Sbjct: 31 IAVDLW 36
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 5 IAIDVW 10
IA+D+W
Sbjct: 31 IAVDLW 36
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 5 IAIDVW 10
IA+D+W
Sbjct: 31 IAVDLW 36
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 5 IAIDVW 10
IA+D+W
Sbjct: 31 IAVDLW 36
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KLQFIAIDVW 10
KLQ D+W
Sbjct: 854 KLQLPQKDIW 863
>sp|UL56_HHV2H|PROTEIN UL56|Human herpesvirus 2 (strain HG52)
Query: 3 QFIAIDV 9
QF+ ID+
Sbjct: 36 QFVVIDI 42
49|SequenceR|250|241|KSSGEKLQFI
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KSSGEKLQFI 10
+ GEK QFI
Sbjct: 1062 RCPGEKSQFI 1071
>sp|NEF_HV2KR|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 SSGEKLQF 9
S+GE LQF
Sbjct: 35 SAGEYLQF 42
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 KSSGEKLQFI 10
+ GEK QFI
Sbjct: 739 RCPGEKSQFI 748
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 KSSGEKLQFI 10
+S+GE QF+
Sbjct: 629 RSNGEPYQFL 638
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 1 KSSGEKLQFI 10
+S+GE QF+
Sbjct: 629 RSNGEPYQFL 638
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 1 KSSGEKLQFI 10
+S+GE QF+
Sbjct: 629 RSNGEPYQFL 638
50|SequenceR|255|246|VAAKEKSSGE
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 VAAKEKSSGE 10
+AAKE++ E
Sbjct: 742 IAAKERADKE 751
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 VAAKEKSSGE 10
+AAKE++ E
Sbjct: 813 IAAKERADKE 822
51|SequenceR|260|251|NMSRFVAAKE
>sp|US02_HCMVT|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 1 NMSRFV 6
NMSRFV
Sbjct: 68 NMSRFV 73
>sp|US02_HCMVM|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 1 NMSRFV 6
NMSRFV
Sbjct: 68 NMSRFV 73
>sp|US02_HCMVA|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 NMSRFV 6
NMSRFV
Sbjct: 68 NMSRFV 73
>sp|PG038_VARV|EARLY protein OPG038|Variola virus
Query: 4 RFVAAKE 10
RFVAA E
Sbjct: 88 RFVAAAE 94
>sp|PG038_VAR67|EARLY protein OPG038|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 RFVAAKE 10
RFVAA E
Sbjct: 88 RFVAAAE 94
>sp|PG038_VACCC|EARLY protein OPG038|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 RFVAAKE 10
RFVAA E
Sbjct: 88 RFVAAAE 94
>sp|PG038_MONPV|EARLY protein OPG038|Monkeypox virus (MPXV)
Query: 4 RFVAAKE 10
RFVAA E
Sbjct: 88 RFVAAAE 94
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NMSRFVAAKE 10
N+SRFV + +
Sbjct: 851 NVSRFVESAQ 860
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NMSRFVAAKE 10
N+SRFV + +
Sbjct: 851 NVSRFVESAQ 860
52|SequenceR|265|256|KGLASNMSRF
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 2 GLASNMSRF 10
GLASN RF
Sbjct: 550 GLASNTKRF 558
>sp|NSS_SFSV|NON-STRUCTURAL protein NS-S|Sandfly fever sicilian virus (SFS)
Query: 1 KGLASNMSRF 10
+G+AS++SRF
Sbjct: 97 QGMASDLSRF 106
>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United
Query: 1 KGLASNMSRF 10
+ L SNM+RF
Sbjct: 196 RDLVSNMTRF 205
>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)
Query: 2 GLASNMSRF 10
G A+N SRF
Sbjct: 152 GSATNASRF 160
>sp|US02_HCMVT|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 3 LASNMSRF 10
+ NMSRF
Sbjct: 65 IVGNMSRF 72
>sp|US02_HCMVM|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 3 LASNMSRF 10
+ NMSRF
Sbjct: 65 IVGNMSRF 72
>sp|US02_HCMVA|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 3 LASNMSRF 10
+ NMSRF
Sbjct: 65 IVGNMSRF 72
>sp|VE5_HPV41|PROBABLE protein E5|Human papillomavirus type 41
Query: 4 ASNMSRF 10
+SN+SRF
Sbjct: 8 SSNLSRF 14
53|SequenceR|270|261|ALWPSKGLAS
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 ALWPSKGLAS 10
A+WP+K A+
Sbjct: 1544 AMWPNKSEAN 1553
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 WPSKGLA 9
W SKGLA
Sbjct: 2044 WVSKGLA 2050
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 3 WPSKGLA 9
W SKGLA
Sbjct: 2044 WVSKGLA 2050
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 WPSKGLA 9
W SKGLA
Sbjct: 2044 WVSKGLA 2050
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 ALWPSK 6
A+WP+K
Sbjct: 1545 AMWPNK 1550
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 ALWPSK 6
A+WP+K
Sbjct: 1545 AMWPNK 1550
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 ALWPSK 6
A+WP+K
Sbjct: 1545 AMWPNK 1550
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 WPSKGLA 9
W SKGL+
Sbjct: 2044 WVSKGLS 2050
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 WPSKGLA 9
W SKGL+
Sbjct: 2047 WVSKGLS 2053
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 WPSKGLA 9
W SKGL+
Sbjct: 2047 WVSKGLS 2053
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 WPSKGL 8
WP +GL
Sbjct: 246 WPKEGL 251
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 WPSKGL 8
W SKGL
Sbjct: 2042 WVSKGL 2047
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LWPSK 6
LWP+K
Sbjct: 846 LWPTK 850
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ALWPSK 6
ALWP K
Sbjct: 1702 ALWPKK 1707
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LWPSK 6
LWP+K
Sbjct: 845 LWPTK 849
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LWPSK 6
LWP+K
Sbjct: 845 LWPTK 849
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 ALWPSK 6
ALWP K
Sbjct: 1675 ALWPKK 1680
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LWPSK 6
LWP+K
Sbjct: 845 LWPTK 849
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 ALWPSK 6
ALWP K
Sbjct: 1680 ALWPKK 1685
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LWPSK 6
LWP+K
Sbjct: 844 LWPTK 848
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LWPSK 6
LWP+K
Sbjct: 846 LWPTK 850
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LWPSK 6
LWP+K
Sbjct: 845 LWPTK 849
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 4 PSKGLAS 10
PS GLAS
Sbjct: 230 PSNGLAS 236
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LWPSK 6
LWP+K
Sbjct: 843 LWPTK 847
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LWPSK 6
LWP+K
Sbjct: 844 LWPTK 848
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 4 PSKGLAS 10
PS GLAS
Sbjct: 246 PSNGLAS 252
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 3 WPSKGLAS 10
W ++G+AS
Sbjct: 1068 WTAEGVAS 1075
54|SequenceR|275|266|TLENGALWPS
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 2 LENGALWPS 10
L+N WPS
Sbjct: 60 LKNDMTWPS 68
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 2 LENGALW 8
L NG LW
Sbjct: 178 LRNGPLW 184
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TLENGAL 7
+LENGA+
Sbjct: 297 SLENGAI 303
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 TLENGAL 7
+LENGA+
Sbjct: 297 SLENGAI 303
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 3 ENGALWPS 10
EN LW S
Sbjct: 39 ENAKLWRS 46
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 2 LENGAL 7
+ENGAL
Sbjct: 52 MENGAL 57
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 2 LENGALW 8
++NG LW
Sbjct: 111 VKNGDLW 117
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 2 LENGALW 8
++NG LW
Sbjct: 111 VKNGDLW 117
>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain
Query: 1 TLENGALW 8
TLE GAL+
Sbjct: 313 TLELGALY 320
>sp|PG040_VAR67|SUPERINFECTION exclusion protein|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 LENGALW 8
L+N LW
Sbjct: 159 LDNNTLW 165
>sp|PG040_VACCC|SUPERINFECTION exclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LENGALW 8
L+N LW
Sbjct: 155 LDNNTLW 161
>sp|PG040_VACCA|SUPERINFECTION exclusion protein|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LENGALW 8
L+N LW
Sbjct: 155 LDNNTLW 161
55|SequenceR|280|271|VVDAVTLENG
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VVDAVTLENG 10
+VD+VT++NG
Sbjct: 2490 IVDSVTVKNG 2499
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 VVDAVTLENG 10
+VD+VT++NG
Sbjct: 2490 IVDSVTVKNG 2499
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 VDAVTLENG 10
V +VTLENG
Sbjct: 750 VYSVTLENG 758
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 VDAVTLENG 10
V +VTLENG
Sbjct: 750 VYSVTLENG 758
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VVDAVTLENG 10
+VD+V ++NG
Sbjct: 2467 IVDSVAVKNG 2476
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 VVDAVTLENG 10
+VD+V ++NG
Sbjct: 2467 IVDSVAVKNG 2476
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 5 VTLENG 10
VTLENG
Sbjct: 122 VTLENG 127
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 1 VVDAVTLENG 10
++ AV+L NG
Sbjct: 298 IISAVSLPNG 307
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 2 VDAVTLENG 10
VDA L NG
Sbjct: 210 VDATNLTNG 218
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 5 VTLENG 10
+TLENG
Sbjct: 69 ITLENG 74
56|SequenceR|285|276|LVSWLVVDAV
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 1 LVSWLVVDAV 10
+ SW + DAV
Sbjct: 256 IFSWTITDAV 265
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 1 LVSWLVVDAV 10
+V+WL+VD +
Sbjct: 253 MVAWLMVDGL 262
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 LVSWLVVDAV 10
+V+WL+VD +
Sbjct: 253 MVAWLMVDGL 262
>sp|GM_VZVO|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Oka vaccine)
Query: 2 VSWLVVD 8
V+WLVVD
Sbjct: 147 VAWLVVD 153
>sp|GM_VZVD|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 VSWLVVD 8
V+WLVVD
Sbjct: 147 VAWLVVD 153
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 LVSWLVV 7
LVSWL V
Sbjct: 822 LVSWLSV 828
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 LVSWLVV 7
LVSWL V
Sbjct: 822 LVSWLSV 828
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 LVSWLVVD 8
LVSW+ D
Sbjct: 251 LVSWVTQD 258
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 1 LVSWLVVD 8
LVSW+ D
Sbjct: 251 LVSWVTQD 258
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 1 LVSWLVVD 8
LVSW+ D
Sbjct: 250 LVSWVTQD 257
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 1 LVSWLVVD 8
LVSW+ D
Sbjct: 250 LVSWVTQD 257
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 WLVVDA 9
W+++DA
Sbjct: 1181 WVIIDA 1186
>sp|VP7_ROTB2|OUTER capsid glycoprotein VP7|Rotavirus X (isolate
Query: 3 SWLVVDA 9
SWL +DA
Sbjct: 152 SWLDLDA 158
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 VSWLVVDA 9
++WL+VD+
Sbjct: 252 LAWLMVDS 259
>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain
Query: 3 SWLVVDA 9
SWL +DA
Sbjct: 152 SWLDLDA 158
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 VSWLVVDAV 10
++W + DAV
Sbjct: 212 ITWQLTDAV 220
57|SequenceR|290|281|GGIQQLVSWL
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 GIQQLVSWL 10
G+Q L SWL
Sbjct: 725 GVQSLFSWL 733
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 GIQQLVSWL 10
G+Q L SWL
Sbjct: 725 GVQSLFSWL 733
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 GIQQLVSWL 10
G+Q L SWL
Sbjct: 725 GVQSLFSWL 733
>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 3 IQQLVSWL 10
IQQ V WL
Sbjct: 131 IQQKVQWL 138
>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)
Query: 3 IQQLVSWL 10
IQQ V WL
Sbjct: 131 IQQKVQWL 138
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 GIQQLVSW 9
G+++LV+W
Sbjct: 6251 GVEKLVNW 6258
>sp|US9_CHV1|ENVELOPE protein US9 homolog|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 1 GGIQQLVSWL 10
GG+ L+ WL
Sbjct: 78 GGLGALMCWL 87
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 1 GGIQQLVSW 9
GG + VSW
Sbjct: 313 GGTEMRVSW 321
>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)
Query: 2 GIQQLVSW 9
G+Q++++W
Sbjct: 385 GVQKVLTW 392
>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)
Query: 2 GIQQLVSW 9
G+Q++++W
Sbjct: 385 GVQKVLTW 392
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 1 GGIQQLVSW 9
GG + VSW
Sbjct: 313 GGTETRVSW 321
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GIQQLVSWL 10
G+Q+LVS L
Sbjct: 180 GLQELVSGL 188
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 2 GIQQLVSW 9
GI+Q SW
Sbjct: 240 GIKQNTSW 247
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 GIQQLVSW 9
GI+Q SW
Sbjct: 240 GIKQNTSW 247
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 2 GIQQLVSWL 10
G +QL WL
Sbjct: 310 GDEQLARWL 318
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 2 GIQQLVSWL 10
G +QL WL
Sbjct: 310 GDEQLARWL 318
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GGIQQLVSWL 10
G +QQ WL
Sbjct: 604 GLVQQTSQWL 613
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GGIQQLVSWL 10
G +QQ WL
Sbjct: 604 GLVQQTSQWL 613
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 GIQQLVSWL 10
G+Q +WL
Sbjct: 2370 GLQLFTTWL 2378
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 GIQQLVSWL 10
G+Q +WL
Sbjct: 2390 GLQLFTTWL 2398
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 GIQQLVSWL 10
G+Q +WL
Sbjct: 2420 GLQLFTTWL 2428
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 GIQQLVSWL 10
G+Q +WL
Sbjct: 2370 GLQLFTTWL 2378
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 GIQQLVSWL 10
G+Q +WL
Sbjct: 2390 GLQLFTTWL 2398
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 GIQQLVSWL 10
G+Q +WL
Sbjct: 2420 GLQLFTTWL 2428
>sp|US9_HHV11|ENVELOPE protein US9|Human herpesvirus 1 (strain 17)
Query: 1 GGIQQLVSWL 10
GG L+ WL
Sbjct: 79 GGFGALLMWL 88
58|SequenceR|295|286|VTVSCGGIQQ
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 VTVSCGGI 8
V SCGG+
Sbjct: 814 VAASCGGV 821
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 VTVSCGGI 8
V SCGG+
Sbjct: 814 VAASCGGV 821
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VTVSCGGI 8
V SCGG+
Sbjct: 814 VAASCGGV 821
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 VTVSCGGI 8
V SCGG+
Sbjct: 814 VAASCGGV 821
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TVSCGG 7
T SCGG
Sbjct: 146 TTSCGG 151
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TVSCGG 7
T SCGG
Sbjct: 146 TTSCGG 151
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 SCGGIQQ 10
+CG IQQ
Sbjct: 30 TCGFIQQ 36
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 TVSCGGIQQ 10
T CG IQQ
Sbjct: 6949 TYICGFIQQ 6957
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 VTVSCGGIQQ 10
+TV C G+++
Sbjct: 436 ITVYCNGVKK 445
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 VTVSCGGIQQ 10
+TV C G+++
Sbjct: 441 ITVYCNGVKK 450
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VTVSCGGI 8
+ SCGG+
Sbjct: 814 MAASCGGV 821
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 VTVSCGGIQQ 10
+TV C G+++
Sbjct: 441 ITVYCNGMKK 450
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 VTVSCGGIQQ 10
+TV C G+++
Sbjct: 441 ITVYCNGMKK 450
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 VTVSCGGIQQ 10
+TV C G+++
Sbjct: 441 ITVYCNGMKK 450
59|SequenceR|300|291|QVNAPVTVSC
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVNAPVTVSC 10
Q+N PV ++C
Sbjct: 291 QLNEPVQINC 300
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 NAPVTVSC 10
N+P T++C
Sbjct: 374 NSPYTINC 381
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 3 NAPVTVSC 10
N+P T++C
Sbjct: 374 NSPYTINC 381
>sp|NSP5_ROTGI|NON-STRUCTURAL protein 5|Rotavirus B (isolate RVB/Rat/United
Query: 1 QVNAPVTV 8
Q+N P+TV
Sbjct: 136 QMNQPITV 143
>sp|DUSP_VACCC|DUAL specificity protein phosphatase OPG106|Vaccinia virus (strain
Query: 1 QVNAPVTVSC 10
Q N PV V C
Sbjct: 101 QRNEPVLVHC 110
>sp|DUSP_MONPV|DUAL specificity protein phosphatase OPG106|Monkeypox virus (MPXV)
Query: 1 QVNAPVTVSC 10
Q N PV V C
Sbjct: 101 QRNEPVLVHC 110
>sp|DUSP_VARV|DUAL specificity protein phosphatase H1|Variola virus
Query: 1 QVNAPVTVSC 10
Q N PV V C
Sbjct: 101 QRNEPVLVHC 110
>sp|DUSP_VAR67|DUAL specificity protein phosphatase OPG106|Variola virus (isolate
Query: 1 QVNAPVTVSC 10
Q N PV V C
Sbjct: 101 QRNEPVLVHC 110
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVNAPVTVSC 10
Q+N VT++C
Sbjct: 292 QLNETVTINC 301
>sp|NSP5_ROTGA|NON-STRUCTURAL protein 5|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 1 QVNAPVTV 8
Q+N P+T+
Sbjct: 132 QMNQPITI 139
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QVNAPVTVSC 10
+++ P+T SC
Sbjct: 524 ELDGPITYSC 533
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVNAPVTVSC 10
Q+NA V ++C
Sbjct: 300 QLNASVQINC 309
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVNAPVTVSC 10
Q+NA + ++C
Sbjct: 282 QLNASIVINC 291
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 NAPVTVSC 10
+AP+T++C
Sbjct: 631 SAPLTLNC 638
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 NAPVTVSC 10
+AP+T++C
Sbjct: 630 SAPLTLNC 637
>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)
Query: 1 QVNAPVTVSC 10
+VN+ +T+SC
Sbjct: 92 EVNSTMTLSC 101
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVNAPVTVSC 10
Q+ PV ++C
Sbjct: 299 QLKEPVVINC 308
>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)
Query: 1 QVNAPVTVSC 10
+VN+ +T+SC
Sbjct: 92 EVNSTMTLSC 101
>sp|PG190_VACCT|PROTEIN OPG190|Vaccinia virus (strain Tian Tan)
Query: 1 QVNAPVTVSC 10
+VN+ +T+SC
Sbjct: 92 EVNSTMTLSC 101
>sp|PG190_VACCL|PROTEIN OPG190|Vaccinia virus (strain Lister) (VACV)
Query: 1 QVNAPVTVSC 10
+VN+ +T+SC
Sbjct: 92 EVNSTMTLSC 101
>sp|PG190_VACCC|PROTEIN OPG190|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 QVNAPVTVSC 10
+VN+ +T+SC
Sbjct: 92 EVNSTMTLSC 101
>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)
Query: 1 QVNAPVTVSC 10
+VN+ +T+SC
Sbjct: 92 EVNSTMTLSC 101
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QVNAPVTVSC 10
Q+ PV ++C
Sbjct: 280 QLKTPVNITC 289
>sp|VME1_SARS2|MEMBRANE protein|Severe acute respiratory syndrome coronavirus
Query: 5 PVTVSC 10
PVT++C
Sbjct: 59 PVTLAC 64
>sp|VME1_SARS|MEMBRANE protein|Severe acute respiratory syndrome coronavirus
Query: 5 PVTVSC 10
PVT++C
Sbjct: 58 PVTLAC 63
>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QVNAPVTVS 9
V AP+TV+
Sbjct: 48 HVEAPITVT 56
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 QVNAPVTVS 9
QVN +T+S
Sbjct: 248 QVNEDITIS 256
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 2 VNAPVTVS 9
VNA VT+S
Sbjct: 322 VNAHVTIS 329
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 QVNAPVTVS 9
QVN +T+S
Sbjct: 248 QVNEDITIS 256
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 QVNAPVTVS 9
QVN +T+S
Sbjct: 248 QVNEDITIS 256
60|SequenceR|305|296|SRMWRQVNAP
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 1 SRMWRQVN 8
SR+WRQ N
Sbjct: 117 SRIWRQAN 124
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 1 SRMWRQVN 8
SR+WRQ N
Sbjct: 117 SRIWRQAN 124
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 4 WRQVNAP 10
W Q+N P
Sbjct: 255 WSQINVP 261
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 2 RMWRQVN 8
R+WRQ++
Sbjct: 573 RLWRQLD 579
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RIWRQAN 124
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 RMWRQVNAP 10
R+W Q +AP
Sbjct: 656 RVWAQESAP 664
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RVWRQAN 124
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RVWRQAN 124
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RVWRQAN 124
>sp|VPAP_HHV7J|DNA polymerase processivity factor|Human herpesvirus 7 (strain JI)
Query: 2 RMWRQVNAP 10
+ W+ +N P
Sbjct: 31 KTWKTINKP 39
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RVWRQAN 124
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RVWRQAN 124
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RVWRQAN 124
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RVWRQAN 124
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RVWRQAN 124
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RVWRQAN 124
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RVWRQAN 124
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 RMWRQVN 8
R+WRQ N
Sbjct: 118 RVWRQAN 124
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 2 RMWRQV 7
R+WRQ+
Sbjct: 568 RLWRQL 573
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 MWRQV 7
MWRQV
Sbjct: 190 MWRQV 194
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 3 MWRQV 7
MWRQV
Sbjct: 189 MWRQV 193
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 3 MWRQV 7
MWRQV
Sbjct: 189 MWRQV 193
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 2 RMWRQVN 8
R WRQ N
Sbjct: 118 RTWRQAN 124
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 SRMWRQVNAP 10
++ WR AP
Sbjct: 1215 TKFWRSSTAP 1224
>sp|VPAP_HHV6Z|DNA polymerase processivity factor|Human herpesvirus 6B (strain Z29)
Query: 2 RMWRQVNAP 10
+ W+ +N P
Sbjct: 32 KSWKTINKP 40
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 RMWRQVNAP 10
R W Q AP
Sbjct: 671 RFWAQETAP 679
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 RMWRQVNAP 10
R W Q AP
Sbjct: 671 RFWAQETAP 679
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 RMWRQVNAP 10
R W Q AP
Sbjct: 671 RFWAQETAP 679
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 RMWRQVNAP 10
R W Q AP
Sbjct: 671 RFWAQETAP 679
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SRMWRQVNAP 10
++ W +VN P
Sbjct: 917 NKYWSKVNFP 926
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SRMWRQVNAP 10
++ W +VN P
Sbjct: 917 NKYWSKVNFP 926
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SRMWRQVNAP 10
++ W +VN P
Sbjct: 917 NKYWSKVNFP 926
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 RMWRQVNAP 10
R W Q AP
Sbjct: 670 RFWAQETAP 678
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SRMWRQVNAP 10
++ W +VN P
Sbjct: 917 NKYWSKVNFP 926
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SRMWRQVNAP 10
++ W +VN P
Sbjct: 911 NKYWSKVNFP 920
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 RMWRQVNAP 10
R W Q AP
Sbjct: 670 RYWSQETAP 678
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 1 SRMWRQVN 8
S +W++VN
Sbjct: 449 SFIWKEVN 456
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SRMWRQVNAP 10
++ W +VN P
Sbjct: 917 NKHWSKVNFP 926
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SRMWRQVNAP 10
++ W +VN P
Sbjct: 917 NKHWSKVNFP 926
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SRMWRQVNAP 10
++ W +VN P
Sbjct: 917 NKHWSKVNFP 926
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 5 RQVNAP 10
RQVN P
Sbjct: 601 RQVNGP 606
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 SRMWRQVNAP 10
S W + NAP
Sbjct: 741 SLFWTEGNAP 750
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 SRMWRQVNAP 10
S W + NAP
Sbjct: 737 SVFWTEGNAP 746
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 SRMWRQVNAP 10
S W + NAP
Sbjct: 738 SVFWTEGNAP 747
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 SRMWRQVNAP 10
S W + NAP
Sbjct: 736 SVFWTEGNAP 745
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 SRMWRQVNAP 10
S W + NAP
Sbjct: 736 SVFWTEGNAP 745
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 4 WRQVN 8
WR+VN
Sbjct: 480 WRRVN 484
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 SRMWRQVNAP 10
S W + NAP
Sbjct: 740 SVFWTEGNAP 749
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 SRMWRQVNAP 10
S W + NAP
Sbjct: 735 SVFWTEGNAP 744
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 SRMWRQVNAP 10
S W + NAP
Sbjct: 737 SIFWTEGNAP 746
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 SRMWRQVNAP 10
S W + NAP
Sbjct: 738 SIFWTEGNAP 747
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 SRMWRQVNAP 10
S W + NAP
Sbjct: 736 SVFWTEGNAP 745
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 SRMWRQVNAP 10
S W + NAP
Sbjct: 738 SIFWTEGNAP 747
61|SequenceR|310|301|ALNECSRMWR
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 LNECSRM 8
LNECS++
Sbjct: 414 LNECSKV 420
>sp|M1_DHVI1|MATRIX protein 1|Dhori virus (strain Indian/1313/61) (Dho)
Query: 5 CSRMWR 10
C+R+W+
Sbjct: 35 CARIWK 40
>sp|G7_VACCC|ASSEMBLY protein G7|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 ECSRM 8
ECSRM
Sbjct: 282 ECSRM 286
>sp|G7_VACCA|ASSEMBLY protein G7|Vaccinia virus (strain Ankara) (VACV)
Query: 4 ECSRM 8
ECSRM
Sbjct: 282 ECSRM 286
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 LNECSRMW 9
+N CS W
Sbjct: 502 VNSCSHFW 509
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 2 LNECSRMW 9
+N CS W
Sbjct: 503 VNSCSHFW 510
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 2 LNECSRMW 9
+N CS W
Sbjct: 501 VNSCSHFW 508
>sp|BHLF1_EBVB9|UNCHARACTERIZED protein BHLF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 CSRMWR 10
C R WR
Sbjct: 155 CPRTWR 160
Query: 5 CSRMWR 10
C R WR
Sbjct: 280 CPRTWR 285
Query: 5 CSRMWR 10
C R WR
Sbjct: 405 CPRTWR 410
Query: 5 CSRMWR 10
C R WR
Sbjct: 530 CPRTWR 535
Query: 5 CSRMWR 10
C R WR
Sbjct: 655 CPRTWR 660
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 5 CSRMW 9
C +MW
Sbjct: 747 CQKMW 751
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 5 CSRMW 9
CSR+W
Sbjct: 1227 CSRVW 1231
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 5 CSRMW 9
CSR+W
Sbjct: 1227 CSRVW 1231
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 5 CSRMW 9
CSR+W
Sbjct: 1227 CSRVW 1231
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 5 CSRMW 9
CSR+W
Sbjct: 1227 CSRVW 1231
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 5 CSRMW 9
CSR+W
Sbjct: 1227 CSRVW 1231
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 5 CSRMW 9
CSR+W
Sbjct: 1227 CSRVW 1231
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 5 CSRMW 9
CSR+W
Sbjct: 1227 CSRVW 1231
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 5 CSRMW 9
CSR+W
Sbjct: 1227 CSRVW 1231
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 5 CSRMW 9
CSR+W
Sbjct: 1227 CSRVW 1231
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 LNECSRMW 9
++ CS+ W
Sbjct: 1760 ISNCSKTW 1767
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 CSRMWR 10
CS WR
Sbjct: 2052 CSNTWR 2057
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 2 LNECSR 7
LNEC R
Sbjct: 770 LNECKR 775
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 CSRMWR 10
CS WR
Sbjct: 2052 CSNTWR 2057
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 ALNECSRMWR 10
A+N S +W+
Sbjct: 2532 AINHISSVWK 2541
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 5 CSRMW 9
C+R+W
Sbjct: 653 CARIW 657
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 5 CSRMW 9
C+R+W
Sbjct: 653 CARIW 657
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 5 CSRMW 9
C+R+W
Sbjct: 653 CARIW 657
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 5 CSRMW 9
C+R+W
Sbjct: 653 CARIW 657
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 5 CSRMW 9
C+R+W
Sbjct: 653 CARIW 657
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 5 CSRMW 9
C+R+W
Sbjct: 653 CARIW 657
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 5 CSRMW 9
C+R+W
Sbjct: 653 CARIW 657
62|SequenceR|320|306|KLLKLATNFPALNEC
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KLLKLATNFPALNEC 15
K LKL T+F L +C
Sbjct: 209 KTLKLLTSFGCLTDC 223
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KLLKLATNFPALNEC 15
K LKL T+F L +C
Sbjct: 209 KTLKLLTSFGCLTDC 223
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 1 KLLKLATN---FPALNE 14
++LKL TN FP L E
Sbjct: 297 EMLKLGTNDPQFPILAE 313
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 1 KLLKLATN---FPALNE 14
++LKL TN FP L E
Sbjct: 297 EMLKLGTNDPQFPILAE 313
>sp|NCAP_CVHN1|NUCLEOPROTEIN coronavirus HKU1 (isolate N1)
Query: 1 KLLKLATN---FPALNE 14
++LKL TN FP L E
Sbjct: 297 EMLKLGTNDPQFPILAE 313
>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KLLKLATNFPAL 12
+LLKL+TN P +
Sbjct: 163 ELLKLSTNQPPI 174
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 1 KLLKLATNFPALNEC 15
KLL L + FP + C
Sbjct: 138 KLLALCSRFPLVTCC 152
>sp|NEC1_HCMVM|NUCLEAR egress protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KLLKLATNFPAL 12
+LLKL+TN P +
Sbjct: 163 ELLKLSTNQPPI 174
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 5 LATNFPALNE 14
L TN P +NE
Sbjct: 127 LHTNMPNVNE 136
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 5 LATNFPALNE 14
L TN P +NE
Sbjct: 127 LHTNMPNVNE 136
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 2 LLKLATNFPALN 13
++ + NFPA N
Sbjct: 60 IIPVLRNFPAFN 71
>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 LLKLATNFPALNEC 15
++KL N LN C
Sbjct: 58 VIKLMPNITLLNNC 71
>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)
Query: 2 LLKLATNFPALNEC 15
++KL N LN C
Sbjct: 55 VIKLMPNITLLNNC 68
>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)
Query: 2 LLKLATNFPALNEC 15
++KL N LN C
Sbjct: 55 VIKLMPNITLLNNC 68
>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)
Query: 2 LLKLATNFPALNEC 15
++KL N LN C
Sbjct: 55 VIKLMPNITLLNNC 68
>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)
Query: 2 LLKLATNFPALNEC 15
++KL N LN C
Sbjct: 55 VIKLMPNITLLNNC 68
>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)
Query: 2 LLKLATNFPALNEC 15
++KL N LN C
Sbjct: 55 VIKLMPNITLLNNC 68
>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)
Query: 2 LLKLATNFPALNEC 15
++KL N LN C
Sbjct: 55 VIKLMPNITLLNNC 68
>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 LLKLATNFPALNEC 15
++KL N LN C
Sbjct: 55 VIKLMPNITLLNNC 68
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 7 TNFPALNEC 15
TNFP++ C
Sbjct: 364 TNFPSVVSC 372
>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 LLKLATNFPALNEC 15
++KL N LN C
Sbjct: 55 VIKLMPNITLLNNC 68
>sp|X_PAVHV|UNCHARACTERIZED protein X|Human parvovirus B19 (strain HV)
Query: 2 LLKLATNFPAL 12
L KLA N+P L
Sbjct: 35 LGKLAYNYPVL 45
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KLLKLATNFPAL 12
++L LAT PA+
Sbjct: 562 EVLTLATKHPAI 573
>sp|UL24_HHV7J|PROTEIN UL24 homolog|Human herpesvirus 7 (strain JI)
Query: 1 KLLKLATNFPALN 13
K+L L +NF LN
Sbjct: 24 KILLLKSNFEKLN 36
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 6 ATNFPALNEC 15
A N P + EC
Sbjct: 67 ALNSPTVEEC 76
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 6 ATNFPALNEC 15
A N P + EC
Sbjct: 67 ALNSPTVEEC 76
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 6 ATNFPALNEC 15
A N P + EC
Sbjct: 67 ALNSPTVEEC 76
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 6 ATNFPALNEC 15
A N P + EC
Sbjct: 67 ALNSPTVEEC 76
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 6 ATNFPALNEC 15
A N P + EC
Sbjct: 67 ALNSPTVEEC 76
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 6 ATNFPALNEC 15
A N P + EC
Sbjct: 67 ALNSPTVEEC 76
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 6 ATNFPALNEC 15
A N P + EC
Sbjct: 67 ALNSPTVEEC 76
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 6 ATNFPALNEC 15
A N P + EC
Sbjct: 67 ALNSPTVEEC 76
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 LKLATNFP 10
KLA NFP
Sbjct: 1403 FKLAFNFP 1410
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 LKLATNFP 10
KLA NFP
Sbjct: 1403 FKLAFNFP 1410
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 LKLATNFP 10
KLA NFP
Sbjct: 1403 FKLAFNFP 1410
>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)
Query: 2 LLKLATNFPALNEC 15
++KL N LN C
Sbjct: 55 VIKLMPNTTLLNNC 68
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KRMKLRTQIPA 370
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KRMKLRTQIPA 370
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KRMKLRTQIPA 370
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KRMKLRTQIPA 370
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KRMKLRTQIPA 370
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KRMKLRTQIPA 370
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KRMKLRTQIPA 370
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KRMKLRTQIPA 370
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KRMKLRTQIPA 370
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KRMKLRTQIPA 370
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KRMKLRTQIPA 370
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KRMKLRTQIPA 370
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KRMKLRTQIPA 370
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KRMKLRTQIPA 370
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KRMKLRTQIPA 370
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KRMKLRTQIPA 370
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I01A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLLKLATNFPA 11
K +KL T PA
Sbjct: 360 KSMKLRTQIPA 370
63|SequenceR|320|311|KLLKLATNFP
>sp|NEC1_HCMVM|NUCLEAR egress protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KLLKLATNFP 10
+LLKL+TN P
Sbjct: 163 ELLKLSTNQP 172
>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KLLKLATNFP 10
+LLKL+TN P
Sbjct: 163 ELLKLSTNQP 172
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 1 KLLKLATNFP 10
KLL L + FP
Sbjct: 138 KLLALCSRFP 147
>sp|NCAP_CVHN1|NUCLEOPROTEIN coronavirus HKU1 (isolate N1)
Query: 1 KLLKLATNFP 10
++LKL TN P
Sbjct: 297 EMLKLGTNDP 306
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 1 KLLKLATNFP 10
++LKL TN P
Sbjct: 297 EMLKLGTNDP 306
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 1 KLLKLATNFP 10
++LKL TN P
Sbjct: 297 EMLKLGTNDP 306
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 LKLATNFP 10
KLA NFP
Sbjct: 1403 FKLAFNFP 1410
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 LKLATNFP 10
KLA NFP
Sbjct: 1403 FKLAFNFP 1410
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 LKLATNFP 10
KLA NFP
Sbjct: 1403 FKLAFNFP 1410
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 5 LATNFP 10
LAT+FP
Sbjct: 1080 LATHFP 1085
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 5 LATNFP 10
LAT+FP
Sbjct: 1080 LATHFP 1085
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 5 LATNFP 10
LAT+FP
Sbjct: 1080 LATHFP 1085
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 5 LATNFP 10
LAT+FP
Sbjct: 1080 LATHFP 1085
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 5 LATNFP 10
LAT+FP
Sbjct: 1080 LATHFP 1085
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 5 LATNFP 10
LAT+FP
Sbjct: 1080 LATHFP 1085
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 5 LATNFP 10
LAT+FP
Sbjct: 1080 LATHFP 1085
>sp|X_PAVHV|UNCHARACTERIZED protein X|Human parvovirus B19 (strain HV)
Query: 4 KLATNFP 10
KLA N+P
Sbjct: 37 KLAYNYP 43
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LLKLATNF 9
L+K+AT F
Sbjct: 342 LIKIATEF 349
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KLLKLATNF 9
K LKL T+F
Sbjct: 209 KTLKLLTSF 217
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KLLKLATNF 9
K LKL T+F
Sbjct: 209 KTLKLLTSF 217
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LLKLATNF 9
LLK+ T+F
Sbjct: 1258 LLKMVTHF 1265
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LLKLATNF 9
LLK+ T+F
Sbjct: 1258 LLKMVTHF 1265
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LLKLATNF 9
LLK+ T+F
Sbjct: 1258 LLKMVTHF 1265
>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)
Query: 2 LLKLATNFP 10
LLK+ N+P
Sbjct: 22 LLKMLKNWP 30
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 4 KLATNFP 10
K+ATN P
Sbjct: 637 KIATNTP 643
THE END