AIMP2_HUMAN Blast Output
Archaea
1|Sequence|1|10|MPMYQVKPYH

>sp|DNAG_METTP|DNA primase DnaG|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 MPMYQVKPY 9
M MY++KP+
Sbjct: 271 MDMYKIKPF 279


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MPMYQVKPY 9
+P Y++KPY
Sbjct: 72 LPEYEIKPY 80


>sp|CBIA_METST|COBYRINATE a,c-diamide synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 MPMYQVKPYH 10
+PM V PYH
Sbjct: 345 LPMVDVFPYH 354


>sp|PRNK_METJA|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase MJ1315|Methanocaldococcus jannaschii (strain

Query: 3 MYQVKPY 9
+Y++KPY
Sbjct: 93 LYEIKPY 99


>sp|CYAS_METAR|CYSTEATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 MPMYQVKP 8
+P+YQV+P
Sbjct: 391 VPIYQVEP 398


>sp|SMC_PYRFU|CHROMOSOME partition protein Smc|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MPMYQVKPYH 10
+P+ ++KP H
Sbjct: 578 LPLNKIKPKH 587


>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MPMYQVKPY 9
+P Y +KPY
Sbjct: 72 LPEYAIKPY 80


>sp|SYFB_METLZ|PHENYLALANINE--TRNA ligase beta subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 MPMYQVKP 8
+P Y+VKP
Sbjct: 72 LPTYEVKP 79


>sp|DAPAL_THEAC|UNCHARACTERIZED DapA-like lyase Ta1157|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MPMYQVKP 8
MP Y +KP
Sbjct: 102 MPTYYIKP 109


>sp|MPGP_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PMYQVKPY 9
P+Y V PY
Sbjct: 248 PIYMVIPY 255


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 1 MPMYQVKP 8
+P Y VKP
Sbjct: 72 LPRYMVKP 79


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 4 YQVKPY 9
Y VKPY
Sbjct: 1167 YNVKPY 1172


>sp|HMGCS_THEVO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MPMYQVKP 8
+P Y++KP
Sbjct: 11 IPRYRIKP 18


>sp|SYDND_AERPE|ASPARTATE--TRNA(ASP/ASN) ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PMYQVKPYH 10
P+++ +P+H
Sbjct: 213 PVFRAEPHH 221


>sp|HMGCS_THEAC|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MPMYQVKP 8
+P Y++KP
Sbjct: 11 IPRYRIKP 18




2|Sequence|6|15|VKPYHGGGAP

>sp|CAPPA_THEPD|PHOSPHOENOLPYRUVATE carboxylase|Thermofilum pendens (strain DSM 2475

Query: 1 VKPYHGGGAP 10
VKP GGG+P
Sbjct: 226 VKPILGGGSP 235


>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VKPYHGGG 8
V P HGGG
Sbjct: 281 VNPMHGGG 288


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VKPYHGGG 8
V P HGGG
Sbjct: 281 VNPMHGGG 288


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VKPYHGGG 8
V P HGGG
Sbjct: 293 VNPVHGGG 300


>sp|MTM3_METJA|TYPE II methyltransferase M.MjaIII|Methanocaldococcus jannaschii

Query: 1 VKPYHGGGA 9
++P+ GGGA
Sbjct: 37 IEPFVGGGA 45


>sp|Y1520_METJA|UNCHARACTERIZED protein MJ1520|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKPYHGGG 8
VKP GGG
Sbjct: 272 VKPLSGGG 279


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 1 VKPYHGGG 8
VKP++GG
Sbjct: 412 VKPHYGGA 419


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 1 VKPYHGG 7
VKP++GG
Sbjct: 412 VKPHYGG 418


>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 HGGGAP 10
HG GAP
Sbjct: 204 HGAGAP 209


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KPYHGGG 8
KP+ GGG
Sbjct: 190 KPWSGGG 196


>sp|UVRC_HALWD|UVRABC system protein C|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VKPYHGGG 8
++ +HGGG
Sbjct: 230 IESFHGGG 237


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 KPYHGGG 8
KP+ GGG
Sbjct: 187 KPWFGGG 193


>sp|YA00_METTH|UPF0146 protein MTH_1000|Methanothermobacter thermautotrophicus (strain

Query: 1 VKPYHGG 7
+KP HGG
Sbjct: 47 IKPSHGG 53


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KPYHGGG 8
KP+ GGG
Sbjct: 190 KPWSGGG 196


>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 YHGGG 8
YHGGG
Sbjct: 321 YHGGG 325


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 YHGGGA 9
+HGGGA
Sbjct: 227 FHGGGA 232


>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 YHGGGA 9
+HGGGA
Sbjct: 227 FHGGGA 232


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 YHGGGA 9
+HGGGA
Sbjct: 229 FHGGGA 234


>sp|TRPG_THEKO|ANTHRANILATE synthase component 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VKPYHGGGAP 10
VKP HG +P
Sbjct: 95 VKPRHGKASP 104


>sp|GGR_PYRHO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VKPYHGGG 8
V P HGGG
Sbjct: 279 VNPIHGGG 286


>sp|Y732_METJA|UNCHARACTERIZED protein MJ0732|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKPYHGGGAP 10
++ +HG G P
Sbjct: 22 IRDFHGYGTP 31


>sp|CISY_SACS2|CITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PYHGGGA 9
P HGG A
Sbjct: 216 PLHGGAA 222


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 YHGGGA 9
+HGGGA
Sbjct: 227 FHGGGA 232


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 YHGGGA 9
+HGGGA
Sbjct: 227 FHGGGA 232


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VKPYHGGG 8
V P HGGG
Sbjct: 279 VNPVHGGG 286


>sp|GGR_PYRAB|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 VKPYHGGG 8
V P HGGG
Sbjct: 279 VNPVHGGG 286


>sp|Y738_METTH|UNCHARACTERIZED protein MTH_738|Methanothermobacter thermautotrophicus (strain

Query: 1 VKPYHG 6
V PYHG
Sbjct: 5 VTPYHG 10


>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 HGGGA 9
HGGGA
Sbjct: 224 HGGGA 228


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 1 VKPYHGG 7
+KP++GG
Sbjct: 412 IKPHYGG 418


>sp|IPK_METJA|ISOPENTENYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HGGGA 9
HGGGA
Sbjct: 53 HGGGA 57


>sp|CISY_THEAC|CITRATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PYHGGGA 9
P HGG A
Sbjct: 221 PLHGGAA 227


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 4 YHGGGAP 10
Y GG AP
Sbjct: 233 YRGGSAP 239


>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 YHGGGAP 10
Y GG AP
Sbjct: 233 YRGGSAP 239




3|Sequence|11|20|GGGAPLRVEL

>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GAPLRVEL 10
GAP+R+EL
Sbjct: 333 GAPIRIEL 340


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 GAPLRVEL 10
G PLRVEL
Sbjct: 343 GVPLRVEL 350


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 1 GGGAPLRVEL 10
G GAPL VEL
Sbjct: 66 GSGAPLSVEL 75


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 1 GGGAPLRVEL 10
G GAPL VEL
Sbjct: 66 GTGAPLSVEL 75


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GAPLRVEL 10
G PLR+EL
Sbjct: 332 GVPLRIEL 339


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 GAPLRVEL 10
G PLR+EL
Sbjct: 332 GVPLRIEL 339


>sp|SYP_METM6|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 GAPLRVEL 10
G PLR+EL
Sbjct: 332 GVPLRIEL 339


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 GAPLRVEL 10
G PLR+EL
Sbjct: 332 GVPLRIEL 339


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GGGAPLRVEL 10
G GAPL VEL
Sbjct: 67 GTGAPLSVEL 76


>sp|AATA_METM5|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 GGGAPLRVEL 10
G GAPL VEL
Sbjct: 66 GTGAPLSVEL 75


>sp|AATA_METM7|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 GGGAPLRVEL 10
G GAPL VEL
Sbjct: 66 GTGAPLSVEL 75


>sp|AATA_METMP|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain DSM

Query: 1 GGGAPLRVEL 10
G GAPL VEL
Sbjct: 66 GTGAPLSVEL 75


>sp|AATA_METM6|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 GGGAPLRVEL 10
G GAPL VEL
Sbjct: 66 GTGAPLSVEL 75


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 GGGAPLRVEL 10
G GAPL VEL
Sbjct: 67 GTGAPLSVEL 76


>sp|Y1674_SULAC|UNCHARACTERIZED protein Saci_1674|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GGGAPLRVEL 10
GGGA LR+++
Sbjct: 206 GGGAVLRIDV 215


>sp|SYP_PYRAE|PROLINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GAPLRVEL 10
G PLRVE+
Sbjct: 349 GVPLRVEI 356


>sp|SYP_METTH|PROLINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 GAPLRVEL 10
G PLRVE+
Sbjct: 349 GVPLRVEI 356


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 GAPLRVEL 10
G PLR+EL
Sbjct: 343 GVPLRLEL 350


>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 GAPLRVEL 10
G PLRVE+
Sbjct: 347 GVPLRVEI 354


>sp|SYP_THEAC|PROLINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GAPLRVEL 10
G PLR+E+
Sbjct: 334 GVPLRIEI 341


>sp|SYP_SULTO|PROLINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GAPLRVEL 10
G PLR+E+
Sbjct: 346 GVPLRIEI 353


>sp|SYP_SULAC|PROLINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GAPLRVEL 10
G PLR+E+
Sbjct: 346 GVPLRIEI 353


>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 GAPLRVEL 10
G PLR+E+
Sbjct: 337 GVPLRIEI 344


>sp|SYP_METVS|PROLINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GAPLRVEL 10
G PLR+E+
Sbjct: 332 GVPLRIEI 339


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GAPLRVEL 10
G PLR+E+
Sbjct: 344 GVPLRIEI 351


>sp|Y2231_ARCFU|UPF0104 membrane protein AF_2231|Archaeoglobus fulgidus (strain ATCC

Query: 1 GGGAPLRVEL 10
GG P+RV++
Sbjct: 87 AGGEPVRVKM 96


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 1 GGGAPLRVEL 10
G G+PL VEL
Sbjct: 67 GTGSPLSVEL 76


>sp|SYP_THEVO|PROLINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GAPLRVEL 10
G PLR+E+
Sbjct: 334 GVPLRIEV 341


>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 GAPLRVEL 10
G PLR+E+
Sbjct: 333 GVPLRIEV 340


>sp|SYP_METJA|PROLINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GAPLRVEL 10
G PLR+E+
Sbjct: 332 GVPLRIEV 339


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GAPLRVEL 10
G PLR+E+
Sbjct: 342 GVPLRIEV 349


>sp|SYP_PYRIL|PROLINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 GAPLRVEL 10
G PLR+E+
Sbjct: 349 GVPLRIEV 356


>sp|Y843_ARCFU|UNCHARACTERIZED protein AF_0843|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GAPLRVE 9
G PLRVE
Sbjct: 89 GKPLRVE 95


>sp|SYP_METKA|PROLINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 GAPLRVEL 10
G PLR+EL
Sbjct: 351 GVPLRIEL 358


>sp|SYP_NATPD|PROLINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 GAPLRVEL 10
G PLR+E+
Sbjct: 345 GVPLRIEI 352


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GGAPLRVEL 10
GAPL VEL
Sbjct: 68 SGAPLSVEL 76


>sp|SYP_HALLT|PROLINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 GAPLRVEL 10
G PLR+E+
Sbjct: 350 GVPLRIEI 357


>sp|ADEC_META3|ADENINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GGGAPL 6
GGGAP+
Sbjct: 408 GGGAPI 413


>sp|PFDA_METMJ|PREFOLDIN subunit alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GGGAPLRVEL 10
GGGA LRV++
Sbjct: 63 GGGAYLRVKV 72


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GAPLRVEL 10
G PLR+E+
Sbjct: 343 GVPLRLEI 350


>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 GAPLRVEL 10
G PLRVE+
Sbjct: 343 GVPLRVEV 350


>sp|SYP_PYRAR|PROLINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 GAPLRVEL 10
G PLRVE+
Sbjct: 349 GVPLRVEV 356


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 GAPLRVEL 10
G PLR+E+
Sbjct: 346 GVPLRLEI 353


>sp|SYP_METMA|PROLINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GAPLRVEL 10
G PLR+E+
Sbjct: 346 GVPLRLEI 353


>sp|GSA_PICTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Picrophilus torridus (strain ATCC 700027

Query: 1 GGGAPL 6
GGGAP+
Sbjct: 264 GGGAPI 269


>sp|SYP_PYRCJ|PROLINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GAPLRVEL 10
G PLRVE+
Sbjct: 349 GVPLRVEV 356


>sp|SYP_METAC|PROLINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GAPLRVEL 10
G PLR+E+
Sbjct: 346 GVPLRLEI 353


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 3 GAPLRVEL 10
GAPL +EL
Sbjct: 68 GAPLSIEL 75


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 3 GAPLRVEL 10
GAPL +EL
Sbjct: 68 GAPLSIEL 75


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GAPLRVEL 10
GAPL +EL
Sbjct: 68 GAPLSIEL 75


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 3 GAPLRVEL 10
GAPL +EL
Sbjct: 68 GAPLSIEL 75


>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 GAPLRVEL 10
G P+R+E+
Sbjct: 346 GVPIRIEI 353


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14

Query: 3 GAPLRVEL 10
GAPL +EL
Sbjct: 68 GAPLSIEL 75


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15

Query: 3 GAPLRVEL 10
GAPL +EL
Sbjct: 68 GAPLSIEL 75


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51

Query: 3 GAPLRVEL 10
GAPL +EL
Sbjct: 68 GAPLSIEL 75


>sp|IF2P_HALWD|PROBABLE translation initiation factor IF-2|Haloquadratum walsbyi (strain

Query: 2 GGAPLRV 8
GAPLRV
Sbjct: 347 AGAPLRV 353


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GGGAPLRVEL 10
G G+P VEL
Sbjct: 67 GTGSPFSVEL 76


>sp|SYN_PYRFU|ASPARAGINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GGAPLRVE 9
GGA +RVE
Sbjct: 86 GGAEVRVE 93


>sp|SYP_AERPE|PROLINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GGGAPLRVEL 10
G P+RVE+
Sbjct: 346 AKGVPIRVEI 355


>sp|Y1261_METTH|UPF0104 membrane protein MTH_1261|Methanothermobacter thermautotrophicus

Query: 1 GGGAPLR 7
GGG P+R
Sbjct: 93 GGGEPVR 99




4|Sequence|16|25|LRVELPTCMY

>sp|HYD2G_PYRFU|SULFHYDROGENASE 2 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VELPTCMY 10
VE P+C+Y
Sbjct: 177 VETPSCIY 184


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 1 LRVELPTCMY 10
L+VELPT +
Sbjct: 305 LKVELPTSSH 314


>sp|SECD_THEGJ|PROTEIN-EXPORT membrane protein SecD|Thermococcus gammatolerans (strain DSM 15229

Query: 4 ELPTCMY 10
E PTC Y
Sbjct: 147 ECPTCWY 153




5|Sequence|21|30|PTCMYRLPNV

>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 TCMYRLPN 9
TC+YR+ N
Sbjct: 160 TCLYRVEN 167


>sp|MOAA_SACS2|PROBABLE GTP 3',8-cyclase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TCMYRLPNV 10
TC+YR NV
Sbjct: 261 TCLYREDNV 269


>sp|MOAA_SACI7|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 TCMYRLPNV 10
TC+YR NV
Sbjct: 261 TCLYREDNV 269


>sp|MOAA_SACI6|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 TCMYRLPNV 10
TC+YR NV
Sbjct: 261 TCLYREDNV 269


>sp|MOAA_SACI4|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 TCMYRLPNV 10
TC+YR NV
Sbjct: 261 TCLYREDNV 269


>sp|MOAA_SACI3|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.27)

Query: 2 TCMYRLPNV 10
TC+YR NV
Sbjct: 261 TCLYREDNV 269


>sp|MOAA_SACI2|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 TCMYRLPNV 10
TC+YR NV
Sbjct: 261 TCLYREDNV 269


>sp|MOAA_SACI1|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 TCMYRLPNV 10
TC+YR NV
Sbjct: 261 TCLYREDNV 269


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 1 PTCMYRLPN 9
P C YR PN
Sbjct: 392 PKCGYRDPN 400


>sp|RS13_CENSY|SMALL ribosomal subunit protein uS13|Cenarchaeum symbiosum (strain A)

Query: 1 PTCMYRLPNV 10
P CM R P +
Sbjct: 5 PICMKRTPKL 14


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 1 PTCMYRLPN 9
P MY LPN
Sbjct: 344 PKIMYGLPN 352


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PTCMYRLP 8
P C+ RLP
Sbjct: 35 PRCLPRLP 42


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 YRLPNV 10
YR+PNV
Sbjct: 357 YRIPNV 362


>sp|Y664_METJA|UNCHARACTERIZED protein MJ0664|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PTCMYR 6
P C+YR
Sbjct: 290 PNCLYR 295


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 5 YRLPNV 10
YR+PN+
Sbjct: 265 YRIPNI 270


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 5 YRLPNV 10
YR+PN+
Sbjct: 265 YRIPNI 270


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 5 YRLPNV 10
YR+PN+
Sbjct: 265 YRIPNI 270


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 5 YRLPNV 10
YR+PN+
Sbjct: 265 YRIPNI 270


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 5 YRLPNV 10
YR+PN+
Sbjct: 265 YRIPNI 270


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 YRLPNV 10
YR+PN+
Sbjct: 265 YRIPNI 270


>sp|RL22_PYRIL|LARGE ribosomal subunit protein uL22|Pyrobaculum islandicum (strain DSM

Query: 5 YRLPNV 10
YR+PN+
Sbjct: 139 YRIPNI 144


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 YRLPNV 10
Y+LPNV
Sbjct: 358 YKLPNV 363


>sp|Y1571_AERPE|UNCHARACTERIZED protein APE_1571.1|Aeropyrum pernix (strain ATCC 700893

Query: 4 MYRLPN 9
+YRLPN
Sbjct: 251 VYRLPN 256


>sp|RL22_PYRAR|LARGE ribosomal subunit protein uL22|Pyrobaculum arsenaticum (strain DSM

Query: 5 YRLPNV 10
YR+PN+
Sbjct: 139 YRIPNI 144


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei (strain

Query: 1 PTCMYR 6
PTC YR
Sbjct: 238 PTCAYR 243




6|Sequence|26|35|RLPNVHGRSY

>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 3 PNVHGR 8
P+VHGR
Sbjct: 156 PDVHGR 161


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RLPNVHGRSY 10
R PN H R Y
Sbjct: 481 RSPNNHNRFY 490


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 RLPNVHGRSY 10
R PN H R Y
Sbjct: 480 RSPNNHNRFY 489


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PNVHG 7
PNVHG
Sbjct: 154 PNVHG 158


>sp|TRM14_ARCFU|TRNA (guanine(6)-N2)-methyltransferase|Archaeoglobus fulgidus (strain

Query: 3 PNVHGRSY 10
PN H R+Y
Sbjct: 15 PNYHRRTY 22


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PNVHG 7
PNVHG
Sbjct: 154 PNVHG 158


>sp|PYRI_METBU|ASPARTATE carbamoyltransferase regulatory chain|Methanococcoides burtonii

Query: 3 PNVHGR 8
P+VHGR
Sbjct: 54 PSVHGR 59


>sp|Y2097_ARCFU|PUTATIVE nickel insertion protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 VHGRSY 10
VHGR Y
Sbjct: 104 VHGRDY 109


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 LPNVHGRSY 10
+P+VH SY
Sbjct: 768 MPSVHMESY 776


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RLPNVHGRSY 10
++P++ GR Y
Sbjct: 41 QIPDIEGRIY 50


>sp|RS7_PYRHO|SMALL ribosomal subunit protein uS7|Pyrococcus horikoshii (strain ATCC

Query: 2 LPNVHGR 8
LP+ HGR
Sbjct: 47 LPHTHGR 53




7|Sequence|31|40|HGRSYGPAPG

>sp|DLD_ARCFU|D-LACTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HGRSYGPAPG 10
HG S+ P PG
Sbjct: 119 HGLSFPPHPG 128


>sp|MUTS2_PYRFU|DNA-BINDING protein MutS2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GRSYGPAPG 10
G+SYG PG
Sbjct: 361 GKSYGNFPG 369


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 3 RSYGPAPG 10
R YGP PG
Sbjct: 14 RRYGPKPG 21


>sp|Y2383_SULTO|UNCHARACTERIZED protein STK_23830|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 RSYGPAP 9
R YGP P
Sbjct: 53 RKYGPVP 59


>sp|DNAK_CENSY|CHAPERONE protein DnaK|Cenarchaeum symbiosum (strain A)

Query: 2 GRSYGPAPG 10
G S GP PG
Sbjct: 637 GESAGPEPG 645


>sp|RS12_THEPD|SMALL ribosomal subunit protein uS12|Thermofilum pendens (strain DSM 2475

Query: 2 GRSYGPAPG 10
GR+YG PG
Sbjct: 113 GRAYGDLPG 121


>sp|LYSJ_SULAC|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfolobus

Query: 1 HGRSYGPAP 9
HG +YG P
Sbjct: 262 HGSTYGGNP 270


>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 1 HGRSYGPAP 9
HG +YG P
Sbjct: 263 HGSTYGGNP 271


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 1 HGRSYGPAP 9
HG +YG P
Sbjct: 262 HGSTYGGNP 270


>sp|RIFK_NATPD|RIBOFLAVIN kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 RSYGPA 8
R+YGPA
Sbjct: 168 RTYGPA 173


>sp|RIFK_HALMA|RIBOFLAVIN kinase|Haloarcula marismortui (strain ATCC 43049

Query: 3 RSYGPA 8
R+YGPA
Sbjct: 257 RTYGPA 262


>sp|MVK_METTH|MEVALONATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 HGRSYGP 7
HGR +GP
Sbjct: 113 HGRDHGP 119


>sp|RS12_METB6|SMALL ribosomal subunit protein uS12|Methanoregula boonei (strain DSM

Query: 2 GRSYGPAPG 10
GRS G PG
Sbjct: 108 GRSMGDIPG 116


>sp|ADHS_META3|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 HGRSYGPAPG 10
HG S GP G
Sbjct: 34 HGVSSGPVAG 43


>sp|MTRH_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus aeolicus (strain ATCC

Query: 2 GRSYGPAPG 10
GR +G PG
Sbjct: 15 GRKFGGQPG 23


>sp|RS12_ARCFU|SMALL ribosomal subunit protein uS12|Archaeoglobus fulgidus (strain ATCC

Query: 2 GRSYGPAPG 10
GRS G PG
Sbjct: 108 GRSMGDIPG 116


>sp|RS12_NANEQ|SMALL ribosomal subunit protein uS12|Nanoarchaeum equitans (strain

Query: 1 HGRSYGPAPG 10
GRS G PG
Sbjct: 108 QGRSMGDIPG 117


>sp|ADHS2_ARCFU|PUTATIVE 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase

Query: 1 HGRSYGPAPG 10
HG S GP G
Sbjct: 28 HGVSMGPIEG 37


>sp|NADE_HYPBU|NH(3)-DEPENDENT NAD(+) synthetase|Hyperthermus butylicus (strain DSM 5456

Query: 1 HGRSYGPAP 9
H RS PAP
Sbjct: 254 HKRSLPPAP 262


>sp|RS6E_METM6|SMALL ribosomal subunit protein eS6|Methanococcus maripaludis (strain C6

Query: 5 YGPAP 9
YGPAP
Sbjct: 111 YGPAP 115


>sp|RS12_METLZ|SMALL ribosomal subunit protein uS12|Methanocorpusculum labreanum (strain

Query: 2 GRSYGPAPG 10
GRS G PG
Sbjct: 108 GRSMGDIPG 116




8|Sequence|36|45|GPAPGAGHVQ

>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GPAPGAGHV 9
GP PG G V
Sbjct: 570 GPTPGVGDV 578


>sp|NIFH1_METIV|NITROGENASE iron protein 1|Methanobacterium ivanovii

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 91 GPEPGVG 97


>sp|GLCDH_METAR|GLUCOSE 1-dehydrogenase|Methanocella arvoryzae (strain DSM 22066

Query: 2 PAPGAGHV 9
P PGAG V
Sbjct: 22 PRPGAGEV 29


>sp|NIFH1_METTL|NITROGENASE iron protein 1|Methanothermococcus thermolithotrophicus

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 98 GPEPGVG 104


>sp|NIFH_METMP|NITROGENASE iron protein|Methanococcus maripaludis (strain DSM 14266

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 90 GPEPGVG 96


>sp|NIFH_METMI|NITROGENASE iron protein|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 90 GPEPGVG 96


>sp|PYRDB_METMA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina mazei (strain

Query: 1 GPAPGAGH 8
GPAP GH
Sbjct: 58 GPAPKTGH 65


>sp|NIFH_METHJ|NITROGENASE iron protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 88 GPEPGVG 94


>sp|NIFH1_METBA|NITROGENASE iron protein 1|Methanosarcina barkeri

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 90 GPEPGVG 96


>sp|PYRDB_METAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina acetivorans

Query: 1 GPAPGAGH 8
GPAP GH
Sbjct: 55 GPAPKTGH 62


>sp|NIFH_METVO|NITROGENASE iron protein|Methanococcus voltae

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 87 GPEPGVG 93


>sp|NIFH1_METTH|NITROGENASE iron protein 1|Methanothermobacter thermautotrophicus (strain

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 90 GPEPGVG 96


>sp|FLAI_SULAC|ARCHAEAL flagellar ATPase motor FlaI|Sulfolobus acidocaldarius (strain ATCC

Query: 4 PGAGHV 9
PG GHV
Sbjct: 145 PGLGHV 150


>sp|Y1365_METJA|UNCHARACTERIZED protein MJ1365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GAGHVQ 10
GAGHV+
Sbjct: 217 GAGHVE 222


>sp|NIFH_METJA|NITROGENASE iron protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 87 GPEPGVG 93


>sp|NIFH2_METIV|NITROGENASE iron protein 2|Methanobacterium ivanovii

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 85 GPEPGVG 91


>sp|NIFH_METAR|NITROGENASE iron protein|Methanocella arvoryzae (strain DSM 22066

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 87 GPEPGVG 93


>sp|NIFH1_METTM|NITROGENASE iron protein 1|Methanothermobacter marburgensis (strain ATCC

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 90 GPEPGVG 96


>sp|THIE_METHJ|THIAMINE-PHOSPHATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 APGAGHVQ 10
APG H+Q
Sbjct: 14 APGCSHIQ 21


>sp|NIFH2_METTH|NITROGENASE iron protein 2|Methanothermobacter thermautotrophicus (strain

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 84 GPEPGVG 90


>sp|NIFH2_METBA|NITROGENASE iron protein 2|Methanosarcina barkeri

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 88 GPEPGVG 94


>sp|Y1211_METTH|PUTATIVE transport protein MTH_1211|Methanothermobacter thermautotrophicus

Query: 4 PGAGHVQ 10
PGAG++Q
Sbjct: 101 PGAGNLQ 107


>sp|PURT_METMP|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 3 APGAGHV 9
+PGA HV
Sbjct: 316 SPGASHV 322


>sp|NIFH_METMJ|NITROGENASE iron protein|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 88 GPEPGIG 94


>sp|CFBC_METBF|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina barkeri

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 89 GPEPGIG 95


>sp|NIFH_METMA|NITROGENASE iron protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 88 GPEPGVG 94


>sp|RNP3_METBF|RIBONUCLEASE P protein component 3|Methanosarcina barkeri (strain Fusaro /

Query: 4 PGAGHVQ 10
PG GHV+
Sbjct: 221 PGPGHVR 227


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 APGAGHV 9
AP AGH+
Sbjct: 45 APSAGHL 51


>sp|CFBC_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 1 GPAPGAG 7
GP PG G
Sbjct: 89 GPEPGIG 95




9|Sequence|41|50|AGHVQEESNL

>sp|Y452_METAC|UNCHARACTERIZED glycosyltransferase MA_0452|Methanosarcina acetivorans (strain ATCC

Query: 2 GHVQEESN 9
GH ++ESN
Sbjct: 304 GHSEQESN 311


>sp|MTSB_METMA|METHYLATED-THIOL--CORRINOID protein MtsB|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AGHVQEES 8
AGH++E+S
Sbjct: 49 AGHIKEQS 56


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GHVQEESN 9
GH +ESN
Sbjct: 187 GHADKESN 194




10|Sequence|46|55|EESNLSLQAL

>sp|YA00_PYRHO|PUTATIVE transport protein PH1000|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EESNLSLQAL 10
E NL+LQAL
Sbjct: 200 ERGNLTLQAL 209


>sp|METK_HALWD|S-ADENOSYLMETHIONINE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ESNLSLQAL 10
ESN++LQA+
Sbjct: 363 ESNVNLQAI 371


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 EESNLSL 7
EESNLS+
Sbjct: 61 EESNLSI 67


>sp|Y084_METJA|UNCHARACTERIZED ATP-binding protein MJ0084|Methanocaldococcus jannaschii (strain

Query: 1 EESNLSLQAL 10
+ESNLSL L
Sbjct: 37 DESNLSLHKL 46




11|Sequence|51|60|SLQALESRQD

>sp|GVPL2_HALSA|GAS vesicle protein L2|Halobacterium salinarum (strain ATCC 700922

Query: 1 SLQALESRQ 9
+LQALE+RQ
Sbjct: 152 TLQALEARQ 160




12|Sequence|56|65|ESRQDDILKR

>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 1 ESRQDDILKR 10
E RQD +LK+
Sbjct: 401 ELRQDKVLKK 410


>sp|AROK_HALSA|SHIKIMATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ESRQDDILKR 10
++R+DD+L R
Sbjct: 153 DNREDDLLFR 162


>sp|AROK_HALS3|SHIKIMATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ESRQDDILKR 10
++R+DD+L R
Sbjct: 153 DNREDDLLFR 162


>sp|PELO_METTP|PROTEIN pelota homolog|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ESRQDDILKR 10
E+R D+LKR
Sbjct: 210 EARYPDLLKR 219


>sp|XACR_HALVD|HTH-TYPE transcriptional regulator XacR|Haloferax volcanii (strain ATCC

Query: 1 ESRQDDILKR 10
ESR D+I++R
Sbjct: 149 ESRVDEIIER 158


>sp|Y290_METJA|UNCHARACTERIZED protein MJ0290|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ESRQDDILKR 10
E Q+D+LKR
Sbjct: 97 EVYQEDLLKR 106


>sp|CP119_SULAC|CYTOCHROME P450 119|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ESRQDDILKR 10
+ R+DDI+K+
Sbjct: 111 DPREDDIVKK 120




13|Sequence|61|70|DILKRLYELK

>sp|PURQ_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ILKRLYE 8
+LKRLYE
Sbjct: 168 VLKRLYE 174


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 3 LKRLYELK 10
L+R+YELK
Sbjct: 344 LERIYELK 351


>sp|THYX_PYRAE|FLAVIN-DEPENDENT thymidylate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DILKRLYE 8
D+LKR YE
Sbjct: 115 DLLKRAYE 122


>sp|NADA1_METAC|QUINOLINATE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DILKRLYELK 10
D++KR+ ELK
Sbjct: 5 DLIKRIQELK 14


>sp|KAE1B_METAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 DILKRLYELK 10
D+LKR+ E+K
Sbjct: 532 DVLKRVEEIK 541


>sp|TAW21_SACS2|TRNA 4-demethylwyosine(37)-methyltransferase Taw21|Saccharolobus

Query: 1 DILKRLYELK 10
D KR+YEL+
Sbjct: 175 DAFKRIYELE 184


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 DILKRLYEL 9
D LKR YEL
Sbjct: 680 DNLKRFYEL 688


>sp|HCGF_METMP|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 1 DILKRLYELK 10
DILK+ Y LK
Sbjct: 156 DILKKEYNLK 165


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DILKRLYEL 9
D KR+YEL
Sbjct: 339 DFEKRIYEL 347


>sp|NNR_ARCFU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Archaeoglobus fulgidus (strain

Query: 1 DILKRLYELK 10
+++KR YE K
Sbjct: 37 EVMKRFYEGK 46


>sp|G1PDH_METHJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanospirillum hungatei JF-1 (strain

Query: 1 DILKRLYELK 10
DILK YE++
Sbjct: 67 DILKDQYEVR 76


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DILKRLYELK 10
DILK YEL+
Sbjct: 257 DILKNKYELE 266


>sp|PRIS_THEVO|DNA primase small subunit PriS|Thermoplasma volcanium (strain ATCC

Query: 1 DILKRLYEL 9
D++ +LYEL
Sbjct: 201 DVISKLYEL 209


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DILKRLYEL 9
D+L++ YEL
Sbjct: 904 DLLEQFYEL 912


>sp|KAE1B_METMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 DILKRLYELK 10
D+L+R+ E+K
Sbjct: 532 DVLRRVEEIK 541


>sp|NADA_METMA|QUINOLINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DILKRLYELK 10
D+ KR+ ELK
Sbjct: 5 DLTKRINELK 14


>sp|PYRF_ARCFU|OROTIDINE 5'-phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC

Query: 2 ILKRLYELK 10
I+KRL E+K
Sbjct: 44 IMKRLSEIK 52


>sp|PURQ_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermoplasma volcanium (strain ATCC 51530

Query: 2 ILKRLYE 8
+LK+LYE
Sbjct: 169 VLKKLYE 175


>sp|SYH_THEKO|HISTIDINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LKRLYEL 9
+KRLYEL
Sbjct: 243 IKRLYEL 249


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 DILKRLYELK 10
D+L+R Y+L+
Sbjct: 781 DLLERFYDLE 790


>sp|RS7_METKA|SMALL ribosomal subunit protein uS7|Methanopyrus kandleri (strain AV19

Query: 3 LKRLYELK 10
L RLYE+K
Sbjct: 7 LDRLYEMK 14


>sp|RAD50_THEVO|DNA double-strand break repair Rad50|Thermoplasma volcanium (strain

Query: 1 DILKRLYELK 10
DI+KR+ E++
Sbjct: 598 DIIKRMNEIE 607


>sp|Y188_METJA|UNCHARACTERIZED protein MJ0188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DILKRLYELK 10
+++ R+YELK
Sbjct: 165 ELVGRMYELK 174




14|Sequence|66|75|LYELKAAVDG

>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 YELKAAVDG 10
YE KAAVDG
Sbjct: 428 YEFKAAVDG 436


>sp|THPR_AERPE|RNA 2',3'-cyclic phosphodiesterase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LYELKAAVDG 10
LYE+KAA G
Sbjct: 165 LYEVKAASSG 174


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 YELKAAVD 9
YE K AVD
Sbjct: 429 YEFKGAVD 436


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YELKAAVD 9
YE K AVD
Sbjct: 437 YEFKKAVD 444


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YELKAAVD 9
YE K AVD
Sbjct: 437 YEFKKAVD 444


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 YELKAAVD 9
YE K AVD
Sbjct: 433 YEFKKAVD 440


>sp|CSX1_METJA|CRISPR system endoribonuclease Csx1|Methanocaldococcus jannaschii (strain

Query: 1 LYELKAAVDG 10
LYEL +DG
Sbjct: 119 LYELSKRLDG 128


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 2 YELKAAVDG 10
YEL AAV G
Sbjct: 322 YELPAAVIG 330


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 2 YELKAAVDG 10
YEL AAV G
Sbjct: 322 YELPAAVIG 330


>sp|DIPPS_THEKO|BIFUNCTIONAL IPC transferase and DIPP|Thermococcus kodakarensis (strain ATCC

Query: 1 LYELKAAVDG 10
LY+L + +DG
Sbjct: 284 LYQLSSILDG 293


>sp|PURP_METKA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanopyrus kandleri (strain AV19 /

Query: 1 LYELKAAVDG 10
++EL A +DG
Sbjct: 308 VFELSARIDG 317




15|Sequence|71|80|AAVDGLSKMI

>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 AAVDGLSKMI 10
AAVDG++ ++
Sbjct: 131 AAVDGMNTLV 140


>sp|METXA_METPE|HOMOSERINE O-acetyltransferase|Methanosphaerula palustris (strain ATCC

Query: 4 DGLSKMI 10
DGLSK+I
Sbjct: 480 DGLSKLI 486


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AAVDGLSKMI 10
AAV+GLS+ +
Sbjct: 407 AAVEGLSRRL 416




16|Sequence|76|85|LSKMIQTPDA

***** No hits found ******


17|Sequence|81|90|QTPDADLDVT

>sp|COFH_ARCFU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Archaeoglobus fulgidus (strain ATCC

Query: 3 PDADLD 8
PDADLD
Sbjct: 98 PDADLD 103


>sp|RS2_AERPE|SMALL ribosomal subunit protein uS2|Aeropyrum pernix (strain ATCC 700893

Query: 3 PDADLDVT 10
PD DLDV+
Sbjct: 187 PDEDLDVS 194


>sp|RS4_METB6|SMALL ribosomal subunit protein uS4|Methanoregula boonei (strain DSM

Query: 3 PDADLD 8
PDAD+D
Sbjct: 90 PDADID 95


>sp|CPGS_PYRHO|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus horikoshii (strain

Query: 3 PDADLDVT 10
PDAD+ +T
Sbjct: 306 PDADIHLT 313


>sp|HIS2_METBF|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PDADLDV 9
PDADL +
Sbjct: 2 PDADLSI 8


>sp|PURP_PYRHO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus horikoshii (strain ATCC

Query: 4 DADLDVT 10
D DLDVT
Sbjct: 219 DLDLDVT 225


>sp|RNP2_NATPD|RIBONUCLEASE P protein component 2|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PDADLD 8
PDAD+D
Sbjct: 23 PDADID 28


>sp|EF1B_NATPD|ELONGATION factor 1-beta|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QTPDADLD 8
Q+P+ DLD
Sbjct: 13 QSPEVDLD 20




18|Sequence|86|95|DLDVTNIIQA

>sp|PDXS_SULAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Sulfolobus acidocaldarius

Query: 2 LDVTNIIQA 10
+DVTN+ QA
Sbjct: 63 MDVTNVTQA 71


>sp|RIFK_METVS|RIBOFLAVIN kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DLDVTNIIQA 10
+LD+ IIQA
Sbjct: 119 NLDIVKIIQA 128


>sp|PDXS_PYRAR|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum arsenaticum

Query: 2 LDVTNIIQA 10
+DVTN+ QA
Sbjct: 64 MDVTNVEQA 72


>sp|PDXS_AERPE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Aeropyrum pernix (strain ATCC

Query: 2 LDVTNIIQA 10
+DVTN+ QA
Sbjct: 62 MDVTNVEQA 70


>sp|PDXS_SULTO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Sulfurisphaera tokodaii

Query: 2 LDVTNIIQA 10
+DVTN+ QA
Sbjct: 43 MDVTNVTQA 51


>sp|PDXS_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum aerophilum (strain

Query: 2 LDVTNIIQA 10
+DVTN+ QA
Sbjct: 63 MDVTNVEQA 71


>sp|PDXS_METKA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanopyrus kandleri (strain

Query: 2 LDVTNIIQA 10
+DVTN+ QA
Sbjct: 22 MDVTNVEQA 30


>sp|PDXS_PYRCJ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum calidifontis

Query: 2 LDVTNIIQA 10
+DVTN+ QA
Sbjct: 61 MDVTNVEQA 69


>sp|PDXS_METJA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanocaldococcus jannaschii

Query: 2 LDVTNIIQA 10
+DVTN+ QA
Sbjct: 22 MDVTNVEQA 30


>sp|PDXS_SACS2|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus solfataricus

Query: 2 LDVTNIIQA 10
+D+TN+ QA
Sbjct: 65 MDITNVQQA 73


>sp|PDXS_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus

Query: 2 LDVTNIIQA 10
+D+TN+ QA
Sbjct: 65 MDITNVQQA 73


>sp|PDXS_SACI6|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus

Query: 2 LDVTNIIQA 10
+D+TN+ QA
Sbjct: 65 MDITNVQQA 73


>sp|PDXS_SACI4|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus

Query: 2 LDVTNIIQA 10
+D+TN+ QA
Sbjct: 65 MDITNVQQA 73


>sp|PDXS_SACI3|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus

Query: 2 LDVTNIIQA 10
+D+TN+ QA
Sbjct: 65 MDITNVQQA 73


>sp|PDXS_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus

Query: 2 LDVTNIIQA 10
+D+TN+ QA
Sbjct: 65 MDITNVQQA 73


>sp|PDXS_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus

Query: 2 LDVTNIIQA 10
+D+TN+ QA
Sbjct: 65 MDITNVQQA 73


>sp|PDXS_METVS|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus vannielii

Query: 2 LDVTNIIQA 10
+DVTN+ QA
Sbjct: 23 MDVTNVEQA 31


>sp|PDXS_METMP|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus maripaludis

Query: 2 LDVTNIIQA 10
+DVTN+ QA
Sbjct: 23 MDVTNVEQA 31


>sp|PDXS_METM6|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus maripaludis

Query: 2 LDVTNIIQA 10
+DVTN+ QA
Sbjct: 23 MDVTNVEQA 31


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 1 DLDVTNIIQ 9
D+D+ N+I+
Sbjct: 464 DIDIVNVIE 472


>sp|PDXS_METM7|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus maripaludis

Query: 2 LDVTNIIQA 10
+DVTN+ QA
Sbjct: 23 MDVTNVEQA 31


>sp|PDXS_METM5|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus maripaludis

Query: 2 LDVTNIIQA 10
+DVTN+ QA
Sbjct: 23 MDVTNVEQA 31


>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 2 LDVTNIIQA 10
LDV NI+ A
Sbjct: 136 LDVINIVDA 144


>sp|DNAG_METM5|DNA primase DnaG|Methanococcus maripaludis (strain C5 /

Query: 1 DLDVTNIIQA 10
D+D TN IQA
Sbjct: 335 DVDATNEIQA 344


>sp|DNAG_METM6|DNA primase DnaG|Methanococcus maripaludis (strain C6 /

Query: 1 DLDVTNIIQA 10
D+D TN IQA
Sbjct: 335 DVDATNEIQA 344


>sp|APGM_SACI6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LDVTNII 8
LDVTNI+
Sbjct: 396 LDVTNIL 402


>sp|APGM_SACI4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LDVTNII 8
LDVTNI+
Sbjct: 396 LDVTNIL 402


>sp|APGM_SACI3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.27)

Query: 2 LDVTNII 8
LDVTNI+
Sbjct: 396 LDVTNIL 402


>sp|APGM_SACI1|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 LDVTNII 8
LDVTNI+
Sbjct: 396 LDVTNIL 402




19|Sequence|91|100|NIIQADEPTT

>sp|PRIS_METPE|DNA primase small subunit PriS|Methanosphaerula palustris (strain ATCC

Query: 3 IQADEPTT 10
+QADEP T
Sbjct: 279 VQADEPVT 286


>sp|PRIS_METHJ|DNA primase small subunit PriS|Methanospirillum hungatei JF-1 (strain

Query: 3 IQADEPTT 10
+QADEP T
Sbjct: 285 VQADEPVT 292


>sp|PRIS_METLZ|DNA primase small subunit PriS|Methanocorpusculum labreanum (strain

Query: 4 QADEPTT 10
QADEP T
Sbjct: 282 QADEPVT 288


>sp|AATE_AERPE|A-TYPE ATP synthase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 1 NIIQADEP 8
NII A+EP
Sbjct: 180 NIIAAEEP 187


>sp|METE_SULTO|METHIONINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IIQADEP 8
IIQ DEP
Sbjct: 175 IIQVDEP 181


>sp|PHNC2_HALMA|PHOSPHONATES import ATP-binding protein PhnC|Haloarcula marismortui (strain ATCC

Query: 2 IIQADEPTT 10
I+ ADEPT+
Sbjct: 166 ILLADEPTS 174


>sp|METE_SACI7|METHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 IIQADEP 8
IIQ DEP
Sbjct: 175 IIQIDEP 181


>sp|METE_SACI1|METHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 IIQADEP 8
IIQ DEP
Sbjct: 175 IIQIDEP 181


>sp|METE_SACI6|METHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 IIQADEP 8
IIQ DEP
Sbjct: 175 IIQIDEP 181


>sp|METE_SACI4|METHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 IIQADEP 8
IIQ DEP
Sbjct: 175 IIQIDEP 181


>sp|METE_SACI3|METHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 IIQADEP 8
IIQ DEP
Sbjct: 175 IIQIDEP 181


>sp|METE_SACI2|METHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 IIQADEP 8
IIQ DEP
Sbjct: 175 IIQIDEP 181


>sp|METE_SACS2|METHIONINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IIQADEP 8
IIQ DEP
Sbjct: 175 IIQIDEP 181


>sp|LIVF_ARCFU|PROBABLE branched-chain amino acid transport|Archaeoglobus fulgidus (strain

Query: 1 NIIQADEPT 9
N++ DEPT
Sbjct: 153 NVLMLDEPT 161


>sp|AGL8_HALVD|LOW-SALT glycan biosynthesis protein Agl8|Haloferax volcanii (strain ATCC

Query: 4 QADEPTT 10
QAD+PTT
Sbjct: 7 QADKPTT 13


>sp|METE_SULAC|METHIONINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IIQADEP 8
+IQ DEP
Sbjct: 176 VIQVDEP 182


>sp|METE_METJA|METHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IIQADEP 8
IIQ DEP
Sbjct: 156 IIQIDEP 162


>sp|PHNC1_HALMA|PHOSPHONATES import ATP-binding protein PhnC|Haloarcula marismortui (strain ATCC

Query: 2 IIQADEPT 9
++ ADEPT
Sbjct: 171 VVLADEPT 178


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM 14266

Query: 1 NIIQADEP 8
NI+ +DEP
Sbjct: 492 NIMDSDEP 499




20|Sequence|96|105|DEPTTLTTNA

>sp|Y266_ARCFU|UNCHARACTERIZED transporter AF_0266|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PTTLTTNA 10
P TLT+NA
Sbjct: 168 PITLTSNA 175


>sp|RL3_SULTO|LARGE ribosomal subunit protein uL3|Sulfurisphaera tokodaii (strain DSM

Query: 2 EPTTLT 7
EPTTLT
Sbjct: 98 EPTTLT 103


>sp|TYSY_METKA|PUTATIVE thymidylate synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 EPTTLTTNA 10
EPTTLT A
Sbjct: 187 EPTTLTVYA 195


>sp|SURE_HALSA|5'-NUCLEOTIDASE SurE|Halobacterium salinarum (strain ATCC 700922

Query: 1 DEPTTLTTN 9
DEP L TN
Sbjct: 4 DEPEILVTN 12


>sp|SURE_HALS3|5'-NUCLEOTIDASE SurE|Halobacterium salinarum (strain ATCC 29341

Query: 1 DEPTTLTTN 9
DEP L TN
Sbjct: 4 DEPEILVTN 12


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 1 DEPTTLTTN 9
DEP TLT +
Sbjct: 620 DEPGTLTND 628


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 DEPTTLTTN 9
DEP TLT +
Sbjct: 638 DEPETLTND 646


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 DEPTTLTTN 9
DEP TLT +
Sbjct: 637 DEPGTLTND 645




21|Sequence|101|110|LTTNALDLNS

>sp|Y1574_METJA|UNCHARACTERIZED ATP-dependent helicase MJ1574|Methanocaldococcus jannaschii (strain

Query: 1 LTTNALDL 8
LTTNAL+L
Sbjct: 333 LTTNALEL 340


>sp|GLPR_HALVD|HTH-TYPE transcriptional regulator GlpR|Haloferax volcanii (strain ATCC

Query: 1 LTTNALDLNS 10
L TNALD+ S
Sbjct: 170 LGTNALDVES 179




22|Sequence|106|115|LDLNSVLGKD

>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LDLNSVLGKD 10
LDLN ++GK+
Sbjct: 535 LDLNDLIGKN 544


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LNSVLGKD 10
+NS+LG+D
Sbjct: 115 INSILGRD 122


>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LDLNSVLGK 9
LDLN ++GK
Sbjct: 535 LDLNDLIGK 543


>sp|RS6E_PYRHO|SMALL ribosomal subunit protein eS6|Pyrococcus horikoshii (strain ATCC

Query: 1 LDLNSVLGKD 10
LDL ++ GKD
Sbjct: 45 LDLKALFGKD 54


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 DLNSVLGK 9
+LN+VLGK
Sbjct: 249 NLNAVLGK 256


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 DLNSVLGK 9
+LN+VLGK
Sbjct: 249 NLNAVLGK 256


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 DLNSVLGK 9
+LN+VLGK
Sbjct: 249 NLNAVLGK 256


>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 DLNSVLGK 9
DLNS +GK
Sbjct: 278 DLNSEIGK 285


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 2 DLNSVLGK 9
DLNS +GK
Sbjct: 275 DLNSEIGK 282


>sp|EF2_IGNH4|ELONGATION factor 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 DLNSVLGK 9
D+NS LGK
Sbjct: 277 DINSELGK 284


>sp|PYRE_PYRAE|OROTATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC

Query: 1 LDLNSVLGK 9
+DL SVLG+
Sbjct: 28 VDLRSVLGE 36


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LDLNSVLGKD 10
LDL+ + G+D
Sbjct: 33 LDLDEIAGED 42


>sp|Y3401_METJA|UNCHARACTERIZED protein MJECS01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DLNSVLGKD 10
DLN +L KD
Sbjct: 143 DLNDILNKD 151


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DLNSVLGK 9
DLNS +GK
Sbjct: 278 DLNSEVGK 285


>sp|EF2_PYRCJ|ELONGATION factor 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 DLNSVLGK 9
DLNS +GK
Sbjct: 278 DLNSEVGK 285


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 DLNSVLGK 9
DLNS +GK
Sbjct: 278 DLNSEVGK 285


>sp|Y404_METJA|UNCHARACTERIZED protein MJ0404|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDLNSVLGK 9
L+LN V+GK
Sbjct: 26 LNLNIVIGK 34


>sp|UPPP_METBU|UNDECAPRENYL-DIPHOSPHATASE burtonii (strain DSM 6242

Query: 1 LDLNSVLG 8
LD+NS++G
Sbjct: 217 LDINSIVG 224


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 1 LDLNSVLGKD 10
+D NS++G D
Sbjct: 841 VDKNSIIGTD 850


>sp|HIS4_METJA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocaldococcus jannaschii

Query: 2 DLNSVLGKD 10
DLN +GKD
Sbjct: 114 DLNKEIGKD 122


>sp|Y284_METJA|UNCHARACTERIZED protein MJ0284|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LNSVLGKD 10
LN+VLG+D
Sbjct: 111 LNNVLGED 118


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LDLNSVLGKD 10
L+ NSVL KD
Sbjct: 192 LNKNSVLSKD 201




23|Sequence|111|120|VLGKDYGALK

>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VLGKDYG 7
VLGK+YG
Sbjct: 531 VLGKEYG 537


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LGKDYGAL 9
+GKDYG L
Sbjct: 110 VGKDYGHL 117


>sp|RL24_METS3|LARGE ribosomal subunit protein uL24|Methanobrevibacter smithii (strain

Query: 1 VLGKDYGALK 10
VLG DYG+ K
Sbjct: 63 VLGVDYGSYK 72


>sp|PMDHL_METTH|PHOSPHOMEVALONATE dehydratase large subunit|Methanothermobacter thermautotrophicus

Query: 3 GKDYGAL 9
G DYGAL
Sbjct: 201 GSDYGAL 207


>sp|SYK_METMI|LYSINE--TRNA ligase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 VLGKDYG 7
+LGK+YG
Sbjct: 504 LLGKNYG 510


>sp|CCA_PYRHO|CCA-ADDING enzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VLGKDYG 7
VLG DYG
Sbjct: 334 VLGYDYG 340


>sp|SYK_METMP|LYSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VLGKDYG 7
+LGK+YG
Sbjct: 504 LLGKNYG 510


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VLGKDYG 7
+LGK YG
Sbjct: 464 ILGKTYG 470


>sp|GPI_THEGJ|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 GKDYGALK 10
G DYG++K
Sbjct: 157 GHDYGSIK 164


>sp|BRP_HALSA|PROBABLE beta-carotene 15,15'-dioxygenase Brp|Halobacterium salinarum

Query: 1 VLGKDYGAL 9
VLG YGAL
Sbjct: 195 VLGGGYGAL 203


>sp|BRP_HALS3|PROBABLE beta-carotene 15,15'-dioxygenase Brp|Halobacterium salinarum

Query: 1 VLGKDYGAL 9
VLG YGAL
Sbjct: 195 VLGGGYGAL 203


>sp|GPI_THEKO|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GKDYGALK 10
G DYG++K
Sbjct: 157 GHDYGSIK 164


>sp|TPIS_METBF|TRIOSEPHOSPHATE isomerase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VLGKDYGALK 10
VLG DY A++
Sbjct: 132 VLGPDYVAIE 141


>sp|GPI_THEON|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus onnurineus (strain NA1)

Query: 3 GKDYGALK 10
G DYG++K
Sbjct: 157 GHDYGSIK 164


>sp|CCA_PYRAB|CCA-ADDING enzyme|Pyrococcus abyssi (strain GE5 /

Query: 1 VLGKDYG 7
VLG DYG
Sbjct: 333 VLGIDYG 339


>sp|G3P_METFO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium formicicum

Query: 1 VLGKDYG 7
V+GKDY
Sbjct: 130 VIGKDYA 136


>sp|G3P_METBR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium bryantii

Query: 1 VLGKDYG 7
V+GKDY
Sbjct: 130 VIGKDYA 136




24|Sequence|116|125|YGALKDIVIN

>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 1 YGALKDIV 8
YGA KDIV
Sbjct: 502 YGAFKDIV 509


>sp|LIPA_METAR|LIPOYL synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 YGALKDIV 8
YGA+KD++
Sbjct: 22 YGAVKDVI 29


>sp|DHOM_SULTO|HOMOSERINE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YGALKDIVI 9
YGAL D+++
Sbjct: 290 YGALSDLIL 298


>sp|SYT_METMA|THREONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YGALKDIVIN 10
Y A KD+V+N
Sbjct: 403 YEANKDLVVN 412


>sp|AGL3_SULAC|UDP-SULFOQUINOVOSE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YGALKDIV 8
YG KDIV
Sbjct: 78 YGFFKDIV 85


>sp|RS24_SULTO|SMALL ribosomal subunit protein eS24|Sulfurisphaera tokodaii (strain

Query: 1 YGALKDIVI 9
YGA +D+V+
Sbjct: 58 YGAQEDLVV 66


>sp|DADD_META3|5'-DEOXYADENOSINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GALKDIVI 9
GAL D+VI
Sbjct: 354 GALADVVI 361


>sp|Y1472_METJA|UNCHARACTERIZED protein MJ1472|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ALKDIVIN 10
ALK IVIN
Sbjct: 149 ALKPIVIN 156




25|Sequence|121|130|DIVINANPAS

>sp|AROE_ARCFU|SHIKIMATE dehydrogenase (NADP(+))|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DIVINANP 8
D+V+NA P
Sbjct: 178 DVVVNATP 185


>sp|AROE_PYRAE|SHIKIMATE dehydrogenase (NADP(+))|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DIVINANP 8
D+VINA P
Sbjct: 178 DVVINATP 185


>sp|CARB1_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain

Query: 2 IVINANPAS 10
+++N+NPA+
Sbjct: 43 VLVNSNPAT 51


>sp|AROE_AERPE|SHIKIMATE dehydrogenase (NADP(+))|Aeropyrum pernix (strain ATCC 700893

Query: 1 DIVINANP 8
D+V+NA P
Sbjct: 182 DVVVNATP 189


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 2 IVINANPAS 10
I++N+NPA+
Sbjct: 42 ILVNSNPAT 50


>sp|AROE_SULAC|SHIKIMATE dehydrogenase (NADP(+))|Sulfolobus acidocaldarius (strain ATCC

Query: 1 DIVINANPAS 10
DI++NA P S
Sbjct: 179 DIIVNATPNS 188


>sp|AROE_IGNH4|SHIKIMATE dehydrogenase (NADP(+))|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DIVINANP 8
DI+INA P
Sbjct: 174 DIIINATP 181


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 2 IVINANPAS 10
+++N+NPA+
Sbjct: 45 VLVNSNPAT 53


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 1 DIVINANP 8
D++INA P
Sbjct: 146 DVLINAKP 153


>sp|RAD50_METAC|DNA double-strand break repair Rad50|Methanosarcina acetivorans (strain

Query: 1 DIVINANP 8
D++INA P
Sbjct: 146 DVLINAKP 153


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 2 IVINANPAS 10
+++N+NPA+
Sbjct: 45 VLVNSNPAT 53


>sp|AROE_PYRIL|SHIKIMATE dehydrogenase (NADP(+))|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DIVINANP 8
D+VINA P
Sbjct: 176 DVVINATP 183


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain

Query: 2 IVINANPAS 10
+++N+NPA+
Sbjct: 45 VLVNSNPAT 53


>sp|AROE_METJA|SHIKIMATE dehydrogenase (NADP(+))|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DIVINANP 8
DI+INA P
Sbjct: 190 DIIINATP 197


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 INANPAS 10
+NANPA+
Sbjct: 102 LNANPAT 108


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 2 IVINANPAS 10
+++N+NPA+
Sbjct: 45 VLVNSNPAT 53


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 2 IVINANPAS 10
+++N+NPA+
Sbjct: 45 VLVNSNPAT 53


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 2 IVINANPAS 10
+++N+NPA+
Sbjct: 45 VLVNSNPAT 53


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum

Query: 2 IVINANPAS 10
+++N+NPA+
Sbjct: 45 VLVNSNPAT 53


>sp|NADM1_SULAC|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DIVINANP 8
D++I+ NP
Sbjct: 96 DVIISGNP 103


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 2 IVINANPAS 10
+++N+NPA+
Sbjct: 45 VLVNSNPAT 53


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 2 IVINANPAS 10
+++N+NPA+
Sbjct: 45 VLVNSNPAT 53


>sp|PUS10_METJA|TRNA pseudouridine synthase Pus10|Methanocaldococcus jannaschii (strain

Query: 1 DIVINANP 8
DIV++ NP
Sbjct: 188 DIVVHINP 195


>sp|AROE_PYRNV|SHIKIMATE dehydrogenase (NADP(+))|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DIVINANP 8
D+V+NA P
Sbjct: 176 DVVVNATP 183


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 2 IVINANPAS 10
+++N+NPA+
Sbjct: 45 VLVNSNPAT 53


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 2 IVINANPAS 10
+++N+NPA+
Sbjct: 45 VLVNSNPAT 53


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 2 IVINANPAS 10
+++N+NPA+
Sbjct: 45 VLVNSNPAT 53


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 2 IVINANPAS 10
+++N+NPA+
Sbjct: 45 VLLNSNPAT 53


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain

Query: 2 IVINANPAS 10
+++N+NPA+
Sbjct: 45 VLLNSNPAT 53


>sp|NADM_SULTO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DIVINANP 8
D+V++ NP
Sbjct: 96 DVVVSGNP 103


>sp|G3P_PYRIL|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DIVINANP 8
DI+I+A+P
Sbjct: 79 DIIIDASP 86


>sp|KCY_METTH|CYTIDYLATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DIVINAN 7
DIVIN N
Sbjct: 148 DIVINTN 154


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain

Query: 2 IVINANPAS 10
+++N+NPA+
Sbjct: 43 VLVNSNPAT 51




26|Sequence|126|135|ANPASPPLSL

>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PASPPLSL 10
PA+PP+S+
Sbjct: 520 PATPPVSM 527


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 NPASPPL 8
NP SPPL
Sbjct: 16 NPYSPPL 22




27|Sequence|131|140|PPLSLLVLHR

>sp|RS24_METMA|SMALL ribosomal subunit protein eS24|Methanosarcina mazei (strain ATCC

Query: 2 PLSLLVLHR 10
PL LLV+ R
Sbjct: 46 PLELLVIQR 54


>sp|RL11_KORCO|LARGE ribosomal subunit protein uL11|Korarchaeum cryptofilum (strain

Query: 1 PPLSLLVL 8
PP S+L+L
Sbjct: 71 PPTSMLIL 78




28|Sequence|136|145|LVLHRLLCEH

>sp|PYRF_METBF|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina barkeri (strain Fusaro

Query: 4 HRLLCEH 10
+RL+CEH
Sbjct: 70 NRLICEH 76


>sp|PYRF_METBU|OROTIDINE 5'-phosphate decarboxylase|Methanococcoides burtonii (strain DSM

Query: 5 RLLCEH 10
RL+CEH
Sbjct: 71 RLICEH 76


>sp|TRM1_THEON|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus onnurineus

Query: 3 LHRLLCEH 10
LHRL EH
Sbjct: 289 LHRLSAEH 296


>sp|RPO2N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanococcus vannielii (strain ATCC

Query: 1 LVLHRLLCE 9
L+ +R+LCE
Sbjct: 165 LIPNRILCE 173


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 1 LVLHRLLCE 9
L+ +R+LCE
Sbjct: 166 LIPNRILCE 174




29|Sequence|141|150|LLCEHFRVLS

>sp|HIS6_PYRAE|IMIDAZOLE glycerol phosphate synthase subunit|Pyrobaculum aerophilum (strain

Query: 5 HFRVLS 10
HFRVLS
Sbjct: 231 HFRVLS 236


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LCEHFRVLS 10
LC H R LS
Sbjct: 38 LCPHLRPLS 46


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LLCEHF 6
++CEHF
Sbjct: 253 MVCEHF 258


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 LLCEHF 6
++CEHF
Sbjct: 253 MVCEHF 258


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 LLCEHF 6
++CEHF
Sbjct: 252 MVCEHF 257


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLCEHFRVLS 10
LCE+F V S
Sbjct: 1103 FLCENFNVSS 1112


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LCEHFRVLS 10
LC+H R L+
Sbjct: 338 LCDHTRCLA 346


>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LLCEHFRVL 9
L EHF+V+
Sbjct: 272 LTAEHFKVM 280


>sp|QUEC_METMA|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LCEHFRV 8
+CEHF +
Sbjct: 49 VCEHFGI 55


>sp|FLAF_METVO|PUTATIVE flagella-related protein F|Methanococcus voltae

Query: 1 LLCEHFRVL 9
L CEH+ V+
Sbjct: 77 LSCEHWTVM 85




30|Sequence|146|155|FRVLSTVHTH

>sp|DLDH_HALVD|DIHYDROLIPOYL dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 3 VLSTVHTH 10
V ST+HTH
Sbjct: 444 VASTIHTH 451


>sp|DLDH_HALSA|DIHYDROLIPOYL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 3 VLSTVHTH 10
V ST+HTH
Sbjct: 443 VASTIHTH 450


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 5 STVHTH 10
STVHTH
Sbjct: 449 STVHTH 454


>sp|MOAC_SULTO|PROBABLE cyclic pyranopterin monophosphate synthase|Sulfurisphaera

Query: 1 FRVLSTVHTH 10
RV+STV H
Sbjct: 86 LRVISTVKAH 95


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RVLSTVHTH 10
RV+ST TH
Sbjct: 397 RVISTEQTH 405


>sp|SYR_PYRAR|ARGININE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RVLSTVHTH 10
RV+ST TH
Sbjct: 397 RVISTEQTH 405


>sp|SYR_PYRAE|ARGININE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RVLSTVHTH 10
RV+ST TH
Sbjct: 397 RVISTEQTH 405


>sp|NIKR_SACS2|PUTATIVE nickel-responsive regulator|Saccharolobus solfataricus (strain

Query: 3 VLSTVHTH 10
++ST+H H
Sbjct: 80 IISTLHLH 87




31|Sequence|151|160|TVHTHSSVKS

>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 TVHTHSSV 8
TVHTH ++
Sbjct: 450 TVHTHPTL 457


>sp|DLDH2_HALMA|DIHYDROLIPOYL dehydrogenase 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 TVHTHSSV 8
T+HTH ++
Sbjct: 446 TIHTHPTL 453


>sp|COFD_ARCFU|2-PHOSPHO-L-LACTATE transferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TVHTHSSVK 9
T HTH +K
Sbjct: 67 TFHTHERLK 75


>sp|DLDH_HALSA|DIHYDROLIPOYL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 TVHTHSSV 8
T+HTH ++
Sbjct: 446 TIHTHPTL 453


>sp|DLDH_HALVD|DIHYDROLIPOYL dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 1 TVHTHSSV 8
T+HTH ++
Sbjct: 447 TIHTHPTL 454




32|Sequence|156|165|SSVKSVPENL

>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SVKSVPENL 10
SVK VPE L
Sbjct: 302 SVKXVPERL 310


>sp|PYRH_METM5|URIDYLATE kinase|Methanococcus maripaludis (strain C5 /

Query: 2 SVKSVPENL 10
+VK VPEN
Sbjct: 89 AVKQVPENF 97


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 KSVPENL 10
KS+PEN+
Sbjct: 160 KSIPENV 166


>sp|PYRH_METMP|URIDYLATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 SVKSVPENL 10
+VK VPEN
Sbjct: 89 AVKQVPENF 97


>sp|PYRH_METM7|URIDYLATE kinase|Methanococcus maripaludis (strain C7 /

Query: 2 SVKSVPENL 10
+VK VPEN
Sbjct: 89 AVKQVPENF 97


>sp|PYRH_META3|URIDYLATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 SVKSVPENL 10
+VK VPEN
Sbjct: 89 AVKKVPENF 97




33|Sequence|161|170|VPENLLKCFG

>sp|DPCKG_METKA|GTP-DEPENDENT dephospho-CoA kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 PENLLKCFG 10
PEN + C+G
Sbjct: 134 PENSIVCYG 142


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 VPENLLK 7
+PENLL+
Sbjct: 471 IPENLLR 477


>sp|TRPC_PYRAB|INDOLE-3-GLYCEROL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 PENLLKCF 9
PE LLK F
Sbjct: 216 PEKLLKSF 223


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 2 PENLLKC 8
P+NL KC
Sbjct: 580 PKNLAKC 586


>sp|WECB_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanococcus maripaludis (strain DSM 14266

Query: 2 PENLLKC 8
PEN+L C
Sbjct: 326 PENILNC 332


>sp|THIE_METMP|THIAMINE-PHOSPHATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 ENLLKC 8
EN+LKC
Sbjct: 169 ENVLKC 174


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 2 PENLLKCFG 10
PE +L C G
Sbjct: 596 PEKILLCHG 604


>sp|NNR_ARCFU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Archaeoglobus fulgidus (strain

Query: 1 VPENLLKC 8
+PE +L+C
Sbjct: 454 IPEAILRC 461


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NLLKCFG 10
++LKC+G
Sbjct: 380 SILKCYG 386




34|Sequence|166|175|LKCFGEQNKK

>sp|SYS_THEVO|SERINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 CFGEQNKK 10
CFG++N K
Sbjct: 115 CFGDENNK 122


>sp|AATA_METMP|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain DSM 14266

Query: 1 LKCFGEQNKK 10
++C G +NK+
Sbjct: 372 VECLGSENKQ 381


>sp|AATA_METM7|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 LKCFGEQNKK 10
++C G +NK+
Sbjct: 372 VECLGSENKQ 381


>sp|AATA_METM6|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 LKCFGEQNKK 10
++C G +NK+
Sbjct: 372 VECLGSENKQ 381


>sp|SYY_METVS|TYROSINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LKCFGEQNKK 10
++ GE+NKK
Sbjct: 91 IRALGEENKK 100


>sp|IF2P_METB6|PROBABLE translation initiation factor IF-2|Methanoregula boonei (strain DSM

Query: 1 LKCFGEQNKK 10
L FG+QN++
Sbjct: 147 LSSFGKQNER 156


>sp|Y1488_PYRFU|UPF0128 protein PF1488|Pyrococcus furiosus (strain ATCC 43587

Query: 4 FGEQNK 9
FGE+NK
Sbjct: 185 FGEENK 190


>sp|TOP6A_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 FGEQNKK 10
FG+ NKK
Sbjct: 301 FGDSNKK 307




35|Sequence|171|180|EQNKKQPRQD

>sp|DHAS_METTH|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EQNKKQPRQD 10
E+N+ QPR D
Sbjct: 286 EENRPQPRMD 295


>sp|FTSY_SULAC|SIGNAL recognition particle receptor FtsY|Sulfolobus acidocaldarius

Query: 1 EQNKKQP 7
E+NKK+P
Sbjct: 21 EENKKEP 27




36|Sequence|176|185|QPRQDYQLGF

>sp|LONB_HALSA|ARCHAEAL Lon protease|Halobacterium salinarum (strain ATCC 700922

Query: 1 QPRQDYQLG 9
Q R+DY+LG
Sbjct: 475 QRRKDYELG 483


>sp|HIS5_SACS2|IMIDAZOLE glycerol phosphate synthase subunit|Saccharolobus solfataricus

Query: 1 QPRQDYQL 8
+PR DY L
Sbjct: 32 KPRNDYDL 39


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 2 PRQDYQL 8
PR+DY+L
Sbjct: 421 PRRDYEL 427


>sp|PYRC_METKA|DIHYDROOROTASE kandleri (strain AV19 /

Query: 2 PRQDYQLGF 10
P DY GF
Sbjct: 67 PHPDYPFGF 75


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 3 RQDYQLGF 10
+ DY LGF
Sbjct: 130 KADYSLGF 137




37|Sequence|181|190|YQLGFTLIWK

>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 4 GFTLIW 9
GFTL+W
Sbjct: 1162 GFTLVW 1167


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 1 YQLGFTLIWK 10
Y LGF + WK
Sbjct: 482 YTLGFVIKWK 491


>sp|NTPTH_PYRCJ|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 QLGFTLIW 9
+LGF +IW
Sbjct: 147 KLGFEIIW 154


>sp|NTPTH_PYRIL|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum islandicum (strain DSM 4184

Query: 2 QLGFTLIW 9
+LGF +IW
Sbjct: 146 RLGFEVIW 153


>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YQLGFTLIWK 10
Y LGF + WK
Sbjct: 474 YLLGFIVRWK 483


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LGFTLIW 9
+GF LIW
Sbjct: 131 VGFPLIW 137


>sp|LACC_HALVD|LACCASE volcanii (strain ATCC 29605

Query: 2 QLGFTLIWK 10
QLG T IW+
Sbjct: 438 QLGATEIWE 446


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 1 YQLGFTLIWK 10
Y LGF + WK
Sbjct: 474 YILGFIVNWK 483


>sp|ILVC_METVS|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus vannielii (strain ATCC

Query: 1 YQLGFTLIW 9
YQ GF +W
Sbjct: 239 YQKGFKNMW 247


>sp|ILVC_METMP|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain DSM

Query: 1 YQLGFTLIW 9
YQ GF +W
Sbjct: 239 YQKGFKNMW 247


>sp|ILVC_METM7|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C7 /

Query: 1 YQLGFTLIW 9
YQ GF +W
Sbjct: 239 YQKGFKNMW 247


>sp|ILVC_METM6|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C6 /

Query: 1 YQLGFTLIW 9
YQ GF +W
Sbjct: 239 YQKGFKNMW 247


>sp|ILVC_METM5|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C5 /

Query: 1 YQLGFTLIW 9
YQ GF +W
Sbjct: 239 YQKGFKNMW 247


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 QLGFTLIWK 10
++GF+L W+
Sbjct: 147 RMGFSLDWR 155


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 QLGFTLIWK 10
++GF+L W+
Sbjct: 144 KMGFSLDWR 152


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 QLGFTLIWK 10
++GF+L W+
Sbjct: 147 RMGFSLDWR 155


>sp|NTPTH_PYRAR|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 LGFTLIW 9
LGF ++W
Sbjct: 146 LGFEILW 152


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 QLGFTLIWK 10
++GF+L W+
Sbjct: 147 RMGFSLDWR 155


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QLGFTLIWK 10
++GF+L W+
Sbjct: 137 RMGFSLDWR 145




38|Sequence|186|195|TLIWKNVPKT

>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 2 LIWKNVP 8
LIWK VP
Sbjct: 1495 LIWKKVP 1501


>sp|SYT_METTH|THREONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LIWKNVPKT 10
L WKN+P +
Sbjct: 297 LTWKNLPAS 305


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 2 LIWKNVP 8
L+WK+VP
Sbjct: 1098 LVWKSVP 1104


>sp|MTD_METMA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 3 IWKNVP 8
IWK+VP
Sbjct: 82 IWKDVP 87


>sp|MTD_METAC|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 3 IWKNVP 8
IWK+VP
Sbjct: 82 IWKDVP 87


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 2 LIWKNVP 8
L+WK VP
Sbjct: 954 LVWKKVP 960


>sp|Y394_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 TLIWKNVPK 9
+LIW +VP+
Sbjct: 279 SLIWLDVPE 287


>sp|SYT_METST|THREONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LIWKNVP 8
L WKN+P
Sbjct: 304 LTWKNMP 310


>sp|CHED1_METMA|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina mazei (strain

Query: 1 TLIWKNVP 8
TLI KN+P
Sbjct: 178 TLIKKNIP 185


>sp|FLAA2_HALSA|FLAGELLIN A2|Halobacterium salinarum (strain ATCC 700922

Query: 1 TLIWKNVPKT 10
T W NVP++
Sbjct: 176 TTYWANVPES 185


>sp|FLAB2_HALSA|FLAGELLIN B2|Halobacterium salinarum (strain ATCC 700922

Query: 1 TLIWKNVPKT 10
T W NVP++
Sbjct: 178 TTYWANVPES 187


>sp|FLAA1_HALSA|FLAGELLIN A1|Halobacterium salinarum (strain ATCC 700922

Query: 1 TLIWKNVPKT 10
T W NVP++
Sbjct: 178 TTYWANVPES 187


>sp|Y865_METJA|PUTATIVE methylthiotransferase MJ0865|Methanocaldococcus jannaschii (strain

Query: 3 IWKNVPK 9
+WK++PK
Sbjct: 405 MWKSMPK 411


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 2 LIWKNVP 8
L+W+ VP
Sbjct: 1129 LVWRKVP 1135


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 3 IWKNV 7
IWKNV
Sbjct: 402 IWKNV 406


>sp|GUAAA_META3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus aeolicus

Query: 3 IWKNVPK 9
++KNVPK
Sbjct: 111 LFKNVPK 117


>sp|CAS1_KORCO|CRISPR-ASSOCIATED endonuclease Cas1|Korarchaeum cryptofilum (strain OPF8)

Query: 3 IWKNV 7
IWKNV
Sbjct: 225 IWKNV 229


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LIWKNVP 8
+ WKN+P
Sbjct: 298 ITWKNLP 304


>sp|CDPAS_PYRAB|CDP-ARCHAEOL synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 WKNVP 8
WKNVP
Sbjct: 163 WKNVP 167


>sp|CCA_SULAC|CCA-ADDING enzyme|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 IWKNVPK 9
+WKNV K
Sbjct: 286 VWKNVEK 292


>sp|Y266_ARCFU|UNCHARACTERIZED transporter AF_0266|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WKNVPK 9
WK++PK
Sbjct: 57 WKDLPK 62


>sp|PYRC_PYRFU|DIHYDROOROTASE furiosus (strain ATCC 43587

Query: 3 IWKNVPK 9
+WKN+ K
Sbjct: 259 LWKNIDK 265


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 WKNVPKT 10
WK +P T
Sbjct: 550 WKEIPMT 556




39|Sequence|191|200|NVPKTQMKFS

>sp|ENDA_NATPD|TRNA-SPLICING endonuclease|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VPKTQMKF 9
VPKT KF
Sbjct: 257 VPKTGFKF 264


>sp|ENDA_HALSA|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 700922

Query: 2 VPKTQMKF 9
VPKT KF
Sbjct: 263 VPKTGFKF 270


>sp|ENDA_HALS3|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 29341

Query: 2 VPKTQMKF 9
VPKT KF
Sbjct: 263 VPKTGFKF 270


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NVPKTQMKF 9
N PKT++ F
Sbjct: 484 NFPKTKLSF 492


>sp|IF6_METVS|TRANSLATION initiation factor 6|Methanococcus vannielii (strain ATCC 35089

Query: 1 NVPKTQMKFS 10
N+P TQ+ S
Sbjct: 43 NIPVTQLNIS 52


>sp|ENDA_METBU|TRNA-SPLICING endonuclease|Methanococcoides burtonii (strain DSM 6242

Query: 2 VPKTQMKF 9
VPKT KF
Sbjct: 273 VPKTGFKF 280




40|Sequence|196|205|QMKFSIQTMC

***** No hits found ******


41|Sequence|201|210|IQTMCPIEGE

>sp|TRKA1_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 1 IQTMCPIEGE 10
IQT+ IEGE
Sbjct: 367 IQTLTTIEGE 376


>sp|TRKA1_METMZ|TRK system potassium uptake protein|Methanosarcina mazei

Query: 1 IQTMCPIEGE 10
IQT+ IEGE
Sbjct: 367 IQTLTTIEGE 376


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 QTMCPIEGE 10
QT+CP + E
Sbjct: 417 QTICPYDEE 425


>sp|Y1409_KORCO|UPF0179 protein Kcr_1409|Korarchaeum cryptofilum (strain OPF8)

Query: 5 CPIEGE 10
CPI GE
Sbjct: 56 CPIHGE 61


>sp|TFE_STAMF|TRANSCRIPTION factor E|Staphylothermus marinus (strain ATCC 43588

Query: 4 MCPIEGE 10
+CP +GE
Sbjct: 119 LCPYDGE 125




42|Sequence|206|215|PIEGEGNIAR

>sp|NFI_THEVO|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma volcanium (strain ATCC

Query: 2 IEGEGNIAR 10
IE GNIAR
Sbjct: 300 IETNGNIAR 308


>sp|LYSJ_AERPE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 PIEGEGNIAR 10
PI+GEG + +
Sbjct: 179 PIQGEGGLTK 188


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PIEGEGNI 8
PI+GEG I
Sbjct: 198 PIQGEGGI 205


>sp|ARGD_METMA|ACETYLORNITHINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PIEGEGNI 8
PI+GEG +
Sbjct: 198 PIQGEGGV 205


>sp|ARGD_METJA|ACETYLORNITHINE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PIEGEGNI 8
P++GEG I
Sbjct: 191 PVQGEGGI 198


>sp|LYSJ_THEKO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 PIEGEGNIA 9
PI+GEG I
Sbjct: 170 PIQGEGGIV 178


>sp|Y921_METJA|UNCHARACTERIZED protein MJ0921|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PIEGEGNI 8
PI GEG I
Sbjct: 268 PINGEGGI 275


>sp|ADH_SULTO|NAD-DEPENDENT alcohol dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PIEGEGN 7
P EGEGN
Sbjct: 94 PWEGEGN 100


>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 1 PIEGEGN 7
P+EG GN
Sbjct: 64 PVEGTGN 70


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 IEGEGNIA 9
I G GNIA
Sbjct: 355 IRGSGNIA 362


>sp|RNZ_PYRCJ|RIBONUCLEASE Z|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PIEGEGNIAR 10
P+E EG + R
Sbjct: 162 PVEVEGRVIR 171


>sp|LYSJ_PYRAE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 PIEGEGNI 8
PI+GEG +
Sbjct: 177 PIQGEGGV 184


>sp|LYSJ_PYRFU|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 PIEGEGNIA 9
PI+GEG +
Sbjct: 170 PIQGEGGVV 178


>sp|DCDB_METB6|DCTP deaminase, dUMP-forming|Methanoregula boonei (strain DSM 21154

Query: 2 IEGEGNIAR 10
IEG+ +IAR
Sbjct: 96 IEGKSSIAR 104


>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 1 PIEGEGNI 8
P++GEG +
Sbjct: 176 PVQGEGGV 183


>sp|DCDB_METMJ|DCTP deaminase, dUMP-forming|Methanoculleus marisnigri (strain ATCC

Query: 2 IEGEGNIAR 10
IEG+ +IAR
Sbjct: 96 IEGKSSIAR 104


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PIEGEGN 7
P++G GN
Sbjct: 346 PVDGNGN 352


>sp|DCDB_METPE|DCTP deaminase, dUMP-forming|Methanosphaerula palustris (strain ATCC

Query: 2 IEGEGNIAR 10
IEG+ +IAR
Sbjct: 96 IEGKSSIAR 104


>sp|DCDB_METHJ|DCTP deaminase, dUMP-forming|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 IEGEGNIAR 10
IEG+ +IAR
Sbjct: 96 IEGKSSIAR 104




43|Sequence|211|220|GNIARFLFSL

>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GNIARFLFSL 10
G+I RF+F+L
Sbjct: 469 GSIERFIFAL 478


>sp|NFI_THEVO|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma volcanium (strain ATCC

Query: 1 GNIARFLFS 9
GNIAR+ FS
Sbjct: 304 GNIARYDFS 312


>sp|FLAK_HALMA|PREFLAGELLIN peptidase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GNIARFLFSL 10
GN+AR FSL
Sbjct: 151 GNLARGRFSL 160


>sp|RSMA_SACS2|PROBABLE ribosomal RNA small subunit|Saccharolobus solfataricus (strain

Query: 1 GNIARFL 7
GNI RFL
Sbjct: 16 GNITRFL 22




44|Sequence|216|225|FLFSLFGQKH

>sp|AROC_THEKO|CHORISMATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FSLFGQKH 10
FSLFG+ H
Sbjct: 8 FSLFGESH 15


>sp|Y764_THEAC|UPF0173 metal-dependent hydrolase Ta0764|Thermoplasma acidophilum (strain

Query: 3 FSLFGQKH 10
FSL G+KH
Sbjct: 14 FSLIGKKH 21


>sp|AROC_THEGJ|CHORISMATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 FSLFGQKH 10
F+LFG+ H
Sbjct: 8 FTLFGESH 15


>sp|AROC_PYRAB|CHORISMATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 FSLFGQKH 10
F+LFG+ H
Sbjct: 8 FTLFGESH 15


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 3 FSLFGQK 9
FSLFG+K
Sbjct: 97 FSLFGRK 103


>sp|Y597_METJA|UNCHARACTERIZED protein MJ0597|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LFSLFGQK 9
LFS+FG K
Sbjct: 273 LFSVFGTK 280


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 FSLFGQK 9
FSL GQK
Sbjct: 498 FSLLGQK 504


>sp|RL18A_METAC|LARGE ribosomal subunit protein eL20|Methanosarcina acetivorans (strain

Query: 3 FSLFGQKH 10
+S+FG KH
Sbjct: 39 YSIFGSKH 46


>sp|RL18A_METTH|LARGE ribosomal subunit protein eL20|Methanothermobacter

Query: 2 LFSLFGQKH 10
L+S FG KH
Sbjct: 39 LYSEFGSKH 47


>sp|RL18A_METMA|LARGE ribosomal subunit protein eL20|Methanosarcina mazei (strain ATCC

Query: 3 FSLFGQKH 10
+S+FG KH
Sbjct: 39 YSIFGSKH 46


>sp|AROA_METS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 3 FSLFGQKH 10
FSL G KH
Sbjct: 400 FSLVGLKH 407




45|Sequence|221|230|FGQKHNAVNA

>sp|Y944_METJA|UNCHARACTERIZED protein MJ0944|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GQKHNAVNA 10
G+ HN +NA
Sbjct: 104 GKNHNIINA 112


>sp|Y1613_METJA|UNCHARACTERIZED protein MJ1613|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GQKHNAV 8
G KHNA+
Sbjct: 120 GAKHNAI 126




46|Sequence|226|235|NAVNATLIDS

>sp|DCDB_META3|DCTP deaminase, dUMP-forming|Methanococcus aeolicus (strain ATCC

Query: 1 NAVNATLI 8
N+VNA+LI
Sbjct: 189 NSVNASLI 196


>sp|COSB_HALS3|CHEMOTACTIC signal transduction system substrate-binding|Halobacterium

Query: 1 NAVNATLID 9
N NATL+D
Sbjct: 76 NTTNATLVD 84


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NAVNATLID 9
N VN+ LID
Sbjct: 380 NTVNSDLID 388




47|Sequence|231|240|TLIDSWVDIA

>sp|RBL_METMA|RIBULOSE bisphosphate carboxylase|Methanosarcina mazei (strain ATCC

Query: 3 IDSWVDIA 10
IDSW +IA
Sbjct: 44 IDSWTEIA 51


>sp|RBL_METBF|RIBULOSE bisphosphate carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 3 IDSWVDIA 10
IDSW +IA
Sbjct: 44 IDSWTEIA 51


>sp|RBL_METAC|RIBULOSE bisphosphate carboxylase|Methanosarcina acetivorans (strain ATCC

Query: 3 IDSWVDIA 10
IDSW +I+
Sbjct: 44 IDSWTEIS 51


>sp|IF2B_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 1 TLIDSWVDIA 10
T+I+++VDIA
Sbjct: 46 TIIENFVDIA 55


>sp|IF2B_THEGJ|TRANSLATION initiation factor 2 subunit|Thermococcus gammatolerans (strain

Query: 1 TLIDSWVDIA 10
T+I+++VDIA
Sbjct: 46 TIIENFVDIA 55


>sp|SYFB_PYRAE|PHENYLALANINE--TRNA ligase beta subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 SWVDIA 10
SWVD+A
Sbjct: 315 SWVDVA 320


>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii

Query: 3 IDSWVDI 9
+D+W+DI
Sbjct: 3 LDAWLDI 9


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 IDSWVDI 9
IDSWV +
Sbjct: 227 IDSWVSV 233


>sp|RADA_METMA|DNA repair and recombination protein|Methanosarcina mazei (strain ATCC

Query: 2 LIDSWVDIA 10
L+DS VD+A
Sbjct: 189 LVDSAVDLA 197


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 TLIDSWV 7
TLID W+
Sbjct: 703 TLIDRWM 709


>sp|F16A1_HALMA|FRUCTOSE-1,6-BISPHOSPHATASE class 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 3 IDSWVD 8
+DSW D
Sbjct: 181 VDSWTD 186




48|Sequence|236|245|WVDIAIFQLK

>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 WVDIAIFQ 8
WVD+ IF+
Sbjct: 266 WVDVQIFR 273


>sp|HMGCS_THEVO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 WVDIAIF 7
WVD AI+
Sbjct: 331 WVDYAIY 337


>sp|HMGCS_THEAC|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WVDIAIF 7
WVD AI+
Sbjct: 331 WVDYAIY 337


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WVDIAIF 7
W+D+AI+
Sbjct: 445 WLDLAIY 451




49|Sequence|241|250|IFQLKEGSSK

>sp|SYE_METTH|GLUTAMATE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IFQLKEGSS 9
+F++KEGS+
Sbjct: 225 MFEMKEGSA 233


>sp|PYRK_METAC|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina

Query: 1 IFQLKEGSS 9
+F+LKEG S
Sbjct: 68 LFELKEGDS 76


>sp|PYRK_METBF|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina barkeri

Query: 1 IFQLKEGSS 9
+F+LKEG S
Sbjct: 68 LFELKEGDS 76


>sp|PYRK_METMA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina mazei

Query: 1 IFQLKEGSS 9
+F+LKEG S
Sbjct: 68 LFELKEGDS 76


>sp|RS4E_METS3|SMALL ribosomal subunit protein eS4|Methanobrevibacter smithii (strain

Query: 1 IFQLKEGS 8
+F+LKEG+
Sbjct: 171 VFELKEGA 178


>sp|VORA_METTM|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter marburgensis

Query: 1 IFQLKEGS 8
IFQ+KE S
Sbjct: 277 IFQIKEDS 284


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 IFQLKEGSSK 10
I +LK+GS K
Sbjct: 157 IIELKDGSEK 166


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 LKEGSSK 10
LKEGSS+
Sbjct: 19 LKEGSSR 25


>sp|PYRK_THEKO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermococcus

Query: 1 IFQLKEG 7
+F+LKEG
Sbjct: 66 LFELKEG 72


>sp|THSB_SACSH|CHAPERONIN subunit beta|Saccharolobus shibatae (strain ATCC 51178

Query: 4 LKEGSSK 10
LKEGSS+
Sbjct: 18 LKEGSSR 24


>sp|THSB_SACS2|CHAPERONIN subunit beta|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 LKEGSSK 10
LKEGSS+
Sbjct: 18 LKEGSSR 24




50|Sequence|246|255|EGSSKEKAAV

>sp|LEUD_SACI1|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 2 GSSKEKAAV 10
GSS+E+AA+
Sbjct: 64 GSSREQAAI 72


>sp|LEUD_SACS2|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 GSSKEKAAV 10
GSS+E+AA+
Sbjct: 64 GSSREQAAI 72


>sp|LEUD_SACI7|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 2 GSSKEKAAV 10
GSS+E+AA+
Sbjct: 64 GSSREQAAI 72


>sp|LEUD_SACI2|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 2 GSSKEKAAV 10
GSS+E+AA+
Sbjct: 64 GSSREQAAI 72


>sp|LEUD_SACI6|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain M.16.4

Query: 2 GSSKEKAAV 10
GSS+E+AA+
Sbjct: 64 GSSREQAAI 72


>sp|LEUD_SACI4|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 2 GSSKEKAAV 10
GSS+E+AA+
Sbjct: 64 GSSREQAAI 72


>sp|LEUD_SACI3|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 2 GSSKEKAAV 10
GSS+E+AA+
Sbjct: 64 GSSREQAAI 72


>sp|LEUD_PYRIL|3-ISOPROPYLMALATE dehydratase small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GSSKEKAAV 10
GSS+E+AA+
Sbjct: 63 GSSREQAAI 71


>sp|LEUD_METS5|3-ISOPROPYLMALATE dehydratase small subunit|Metallosphaera sedula (strain ATCC

Query: 2 GSSKEKAAV 10
GSS+E+AA+
Sbjct: 64 GSSREQAAI 72


>sp|LEUD_SULTO|3-ISOPROPYLMALATE dehydratase small subunit|Sulfurisphaera tokodaii (strain DSM

Query: 2 GSSKEKAAV 10
GSS+E+AA+
Sbjct: 64 GSSREQAAI 72


>sp|LEUD_PYRNV|3-ISOPROPYLMALATE dehydratase small subunit|Pyrobaculum neutrophilum (strain DSM

Query: 2 GSSKEKAAV 10
GSS+E+AA+
Sbjct: 63 GSSREQAAI 71


>sp|LEUD_PYRCJ|3-ISOPROPYLMALATE dehydratase small subunit|Pyrobaculum calidifontis (strain DSM

Query: 2 GSSKEKAAV 10
GSS+E+AA+
Sbjct: 63 GSSREQAAI 71


>sp|FNO_METTH|F420-DEPENDENT NADP reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EGSSKEKAA 9
EGS+ E+AA
Sbjct: 124 EGSAAERAA 132




51|Sequence|251|260|EKAAVFRSMN

>sp|Y1852_ARCFU|UNCHARACTERIZED protein AF_1852|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EKAAVFRSMN 10
EK V+RS+N
Sbjct: 94 EKIRVYRSIN 103




52|Sequence|256|265|FRSMNSALGK

>sp|TDXH_METMA|PEROXIREDOXIN mazei (strain ATCC BAA-159

Query: 1 FRSMNSAL 8
FRSMN+ L
Sbjct: 58 FRSMNTEL 65


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 1 FRSMNSALG 9
FRS N +LG
Sbjct: 182 FRSFNKSLG 190


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 1 FRSMNSALG 9
FRS N +LG
Sbjct: 185 FRSFNKSLG 193


>sp|RADB_THEGJ|DNA repair and recombination protein|Thermococcus gammatolerans (strain

Query: 1 FRSMNSALGK 10
+RS+ S LGK
Sbjct: 124 WRSLTSELGK 133




53|Sequence|261|270|SALGKSPWLA

>sp|Y2201_ARCFU|UNCHARACTERIZED protein AF_2201|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SALGKSPWL 9
SALGKSP+
Sbjct: 170 SALGKSPYF 178


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 SALGKSPWLA 10
S L K+PWLA
Sbjct: 250 SELRKNPWLA 259


>sp|MBHJ_PYRFU|PROBABLE membrane-bound hydrogenase subunit mbhJ|Pyrococcus furiosus

Query: 3 LGKSPWL 9
+G+SPW+
Sbjct: 21 IGRSPWV 27


>sp|TRET_PYRHO|TREHALOSE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 KSPWL 9
KSPWL
Sbjct: 146 KSPWL 150


>sp|RL24_CALMQ|LARGE ribosomal subunit protein uL24|Caldivirga maquilingensis (strain

Query: 2 ALGKSPWLA 10
AL K+PW A
Sbjct: 16 ALTKAPWHA 24


>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 1 SALGKSPWL 9
+A+G +PW+
Sbjct: 439 NAIGDTPWV 447


>sp|MOBDP_HALVD|PROBABLE molybdenum ABC transporter permease|Haloferax volcanii (strain ATCC

Query: 2 ALGKSPW 8
ALG +PW
Sbjct: 262 ALGTNPW 268


>sp|SYK_METMP|LYSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SALGKSPW 8
+ +GK PW
Sbjct: 208 NGIGKLPW 215


>sp|SYK_METMI|LYSINE--TRNA ligase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 SALGKSPW 8
+ +GK PW
Sbjct: 208 NGIGKLPW 215




54|Sequence|266|275|SPWLAGNELT

>sp|HEM3_METS5|PROBABLE porphobilinogen deaminase|Metallosphaera sedula (strain ATCC 51363

Query: 1 SPWLAGNEL 9
SP +AGN+L
Sbjct: 267 SPQIAGNQL 275


>sp|EF1A_METST|ELONGATION factor 1-alpha|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SPWLAGNEL 9
+PW GN L
Sbjct: 189 TPWYKGNTL 197


>sp|CBIA_HALMA|COBYRINATE a,c-diamide synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PWLAGNE 8
PWLAG +
Sbjct: 61 PWLAGED 67


>sp|Y1118_PICTO|UPF0173 metal-dependent hydrolase PTO1118|Picrophilus torridus (strain

Query: 2 PWLAGNELT 10
P+LAGN L+
Sbjct: 23 PFLAGNPLS 31


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 SPWLAGNE 8
SPW GN+
Sbjct: 249 SPWAIGND 256


>sp|Y055_KORCO|UPF0173 metal-dependent hydrolase Kcr_0055|Korarchaeum cryptofilum

Query: 2 PWLAGN 7
PW+ GN
Sbjct: 24 PWIEGN 29


>sp|CAS1C_METRM|CRISPR-ASSOCIATED protein Cas1 3|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 3 WLAGNEL 9
WLA NEL
Sbjct: 173 WLAVNEL 179


>sp|CBIA_HALSA|COBYRINATE a,c-diamide synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PWLAGNE 8
PWL+G +
Sbjct: 70 PWLSGTD 76


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WLAGNELT 10
W AG++LT
Sbjct: 632 WQAGSQLT 639


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 WLAGNELT 10
W AG++LT
Sbjct: 632 WQAGSQLT 639


>sp|FTR_ARCFU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WLAGNELT 10
W+A NE T
Sbjct: 34 WVAANEAT 41


>sp|COFD_METPE|2-PHOSPHO-L-LACTATE transferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 WLAGNELT 10
W++GN L+
Sbjct: 38 WISGNHLS 45




55|Sequence|271|280|GNELTVADVV

>sp|RL3_METPE|LARGE ribosomal subunit protein uL3|Methanosphaerula palustris (strain

Query: 1 GNELTVADVV 10
GNE+ +ADV+
Sbjct: 184 GNEVNLADVI 193


>sp|Y884_ARCFU|UNCHARACTERIZED protein AF_0884|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NELTVADVV 10
NEL V DVV
Sbjct: 76 NELKVGDVV 84


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 GNELTVADVV 10
GN++ V DVV
Sbjct: 619 GNQIYVLDVV 628


>sp|BACH_HALSS|HALORHODOPSIN sp. (strain SG1)

Query: 2 NELTVADV 9
NE TVADV
Sbjct: 260 NERTVADV 267


>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 1 GNELTVADVV 10
G +LT +DVV
Sbjct: 110 GTDLTESDVV 119


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 1 GNELTVADVV 10
G +LT +DVV
Sbjct: 110 GTDLTESDVV 119


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GNELTVADVV 10
GN++ V D+V
Sbjct: 619 GNQIYVLDIV 628




56|Sequence|276|285|VADVVLWSVL

>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VADVVLW 7
+AD+VLW
Sbjct: 424 IADIVLW 430


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VADVVLW 7
+AD+VLW
Sbjct: 432 LADIVLW 438


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VADVVLW 7
+AD+VLW
Sbjct: 432 MADIVLW 438


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 1 VADVVLW 7
V D+VLW
Sbjct: 4 VTDIVLW 10


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 1 VADVVLW 7
V D+VLW
Sbjct: 4 VTDIVLW 10


>sp|HUTI_PYRAR|IMIDAZOLONEPROPIONASE arsenaticum (strain DSM 13514

Query: 1 VADVVLWSV 9
+AD+V+W V
Sbjct: 359 IADLVIWDV 367


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain

Query: 1 VADVVLW 7
V D+VLW
Sbjct: 4 VTDIVLW 10


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 1 VADVVLWSVL 10
V+D+ LW+++
Sbjct: 100 VSDIKLWAIV 109


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 VADVVLWSVL 10
V+D+ LW+++
Sbjct: 100 VSDIKLWAIV 109


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ADVVLW 7
AD++LW
Sbjct: 221 ADIILW 226


>sp|Y897_ARCFU|UNCHARACTERIZED protein AF_0897|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VVLWSVL 10
+++WSVL
Sbjct: 184 IIIWSVL 190


>sp|NADA_HALSA|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ADVVLW 7
AD+VLW
Sbjct: 227 ADIVLW 232


>sp|NADA_HALS3|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ADVVLW 7
AD+VLW
Sbjct: 227 ADIVLW 232




57|Sequence|281|290|LWSVLQQIGG

>sp|ACDA1_PYRFU|ACETATE--COA ligase [ADP-forming] I subunit|Pyrococcus furiosus (strain ATCC

Query: 2 WSVLQQIG 9
W++L++IG
Sbjct: 175 WTILEKIG 182


>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 1 LWSVLQQIGG 10
LW VL+ GG
Sbjct: 232 LWPVLKLTGG 241


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 2 WSVLQQIGG 10
W V+ Q GG
Sbjct: 625 WGVMVQFGG 633


>sp|Y860_PYRFU|UNCHARACTERIZED protein PF0860|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LWSVLQQIGG 10
LW+V + IGG
Sbjct: 136 LWNVKRIIGG 145


>sp|RNH2_AERPE|RIBONUCLEASE HII|Aeropyrum pernix (strain ATCC 700893

Query: 2 WSVLQQIGG 10
WS ++++GG
Sbjct: 198 WSTVRKLGG 206




58|Sequence|286|295|QQIGGCSVTV

>sp|Y294_THEVO|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma volcanium

Query: 1 QQIGGCSV 8
+ IGGC+V
Sbjct: 281 ESIGGCAV 288


>sp|GLMM_METVS|PHOSPHOGLUCOSAMINE mutase|Methanococcus vannielii (strain ATCC 35089

Query: 4 GGCSVTV 10
GGC VT+
Sbjct: 57 GGCDVTI 63


>sp|ENDA_THEVO|TRNA-SPLICING endonuclease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 QIGGCSVT 9
+IG CSVT
Sbjct: 154 KIGKCSVT 161


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 2 QIGGCSVTV 10
Q G C+VT+
Sbjct: 52 QCGSCAVTI 60


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QQIGGCSV 8
++GGC+V
Sbjct: 513 HRVGGCTV 520




59|Sequence|291|300|CSVTVPANVQ

>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 5 VPANVQ 10
VPANVQ
Sbjct: 339 VPANVQ 344


>sp|GATA_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanocaldococcus jannaschii (strain

Query: 3 VTVPANV 9
+TVPAN+
Sbjct: 384 LTVPANI 390


>sp|DEOC_METTH|DEOXYRIBOSE-PHOSPHATE aldolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 CSVTVPANVQ 10
C+V P NV+
Sbjct: 44 CAVVTPTNVR 53


>sp|RNP4_THEAC|RIBONUCLEASE P protein component 4|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VTVPANVQ 10
+T+PAN++
Sbjct: 44 ITLPANIK 51


>sp|AROA_METLZ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 CSVTVPANV 9
C VT PAN+
Sbjct: 357 CIVTGPANL 365




60|Sequence|296|305|PANVQRWMRS

>sp|PURA_METVS|ADENYLOSUCCINATE synthetase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PANVQRWMRS 10
PANV R MR+
Sbjct: 133 PANVDRAMRT 142


>sp|PURA_METMP|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PANVQRWMRS 10
PANV R MR+
Sbjct: 133 PANVDRAMRT 142


>sp|PURA_METM7|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C7 /

Query: 1 PANVQRWMRS 10
PANV R MR+
Sbjct: 133 PANVDRAMRT 142


>sp|PURA_METM6|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C6 /

Query: 1 PANVQRWMRS 10
PANV R MR+
Sbjct: 133 PANVDRAMRT 142


>sp|PURA_METM5|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C5 /

Query: 1 PANVQRWMRS 10
PANV R MR+
Sbjct: 133 PANVDRAMRT 142


>sp|PURA_META3|ADENYLOSUCCINATE synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PANVQRWMRS 10
PANV R MR+
Sbjct: 133 PANVDRAMRT 142


>sp|PURA_METTH|ADENYLOSUCCINATE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PANVQRWMRS 10
PAN +R MR+
Sbjct: 133 PANAERVMRT 142


>sp|RS13_METLZ|SMALL ribosomal subunit protein uS13|Methanocorpusculum labreanum

Query: 1 PANVQRWM 8
PA+V +WM
Sbjct: 73 PASVPKWM 80


>sp|GSA_HALSA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ANVQRWMR 9
A VQRW R
Sbjct: 395 AAVQRWNR 402


>sp|GSA_HALS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ANVQRWMR 9
A VQRW R
Sbjct: 395 AAVQRWNR 402


>sp|DEGLY_PYRHO|DEGLYCASE PH1704|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PANVQRWMR 9
PA++ WMR
Sbjct: 151 PADLYAWMR 159


>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ANVQRWMR 9
AN+Q W R
Sbjct: 297 ANIQLWAR 304


>sp|SECY_PYRAB|PROTEIN translocase subunit SecY|Pyrococcus abyssi (strain GE5 /

Query: 2 ANVQRWMR 9
AN+Q W R
Sbjct: 297 ANIQLWAR 304


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ANVQRWM 8
A +QRW+
Sbjct: 313 ATIQRWL 319


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ANVQRWMR 9
AN+Q W R
Sbjct: 297 ANIQLWAR 304




61|Sequence|301|310|RWMRSCENLA

>sp|Y079_METJA|UNCHARACTERIZED protein MJ0079|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RWMRSCENL 9
R +RSCENL
Sbjct: 173 RGIRSCENL 181


>sp|PIMT_THESM|PROTEIN-L-ISOASPARTATE O-methyltransferase|Thermococcus sibiricus (strain DSM 12597

Query: 1 RWMRSCENL 9
+WMR ENL
Sbjct: 9 KWMRLVENL 17


>sp|HIS81_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WMRSC 6
WMRSC
Sbjct: 230 WMRSC 234


>sp|PCCA_HALMT|PROPIONYL-COA carboxylase, biotin carboxylase and|Haloferax mediterranei

Query: 1 RWMRSCENLA 10
R MR+CE L
Sbjct: 16 RVMRACEELG 25


>sp|GLYA_META3|SERINE hydroxymethyltransferase|Methanococcus aeolicus (strain ATCC

Query: 2 WMRSCENL 9
WMR C L
Sbjct: 20 WMRECIKL 27


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WMRSCENL 9
W ++CE L
Sbjct: 439 WAKNCEKL 446


>sp|Y1452_METJA|UNCHARACTERIZED protein MJ1452|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 RSCENLA 10
+SCENL
Sbjct: 195 KSCENLG 201


>sp|CBIT_THEAC|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 3 MRSCENL 9
MR+C NL
Sbjct: 87 MRNCRNL 93


>sp|RNZ_AERPE|RIBONUCLEASE Z|Aeropyrum pernix (strain ATCC 700893

Query: 2 WMRSCENL 9
W R+C N+
Sbjct: 141 WERACHNI 148




62|Sequence|306|320|CENLAPFNTALKLLK

>sp|CAS1A_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ENLAPFNTALKL 13
+NL PFN AL +
Sbjct: 237 DNLDPFNRALNI 248


>sp|SYT_ARCFU|THREONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NLAPFNTALKLLK 15
NLA TA+KLLK
Sbjct: 81 NLADAETAVKLLK 93


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CENLAPFNTALKLLK 15
C+ A FN LK++K
Sbjct: 112 CQVYADFNDVLKIIK 126


>sp|CBID_THEVO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LAPFNTALKLLK 15
L P NTALK K
Sbjct: 215 LCPGNTALKFAK 226


>sp|NNR_KORCO|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Korarchaeum cryptofilum (strain

Query: 5 APFNTALKLLK 15
AP+ TAL LK
Sbjct: 252 APYFTALSFLK 262


>sp|HMDH_ARCFU|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CENLAPF 7
CE +APF
Sbjct: 209 CEKVAPF 215


>sp|SALAC_HALSA|SALACTIN salinarum (strain ATCC 700922

Query: 2 ENLAPFNTA 10
E LAPF+T
Sbjct: 192 EQLAPFSTG 200


>sp|AROK_PYRAB|SHIKIMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 NLAPFNTALKL 13
+LAP ALKL
Sbjct: 225 DLAPMREALKL 235


>sp|Y1120_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1120|Methanocaldococcus

Query: 4 LAPFNTALKLLK 15
+ F+ ALKLLK
Sbjct: 113 ITSFDNALKLLK 124


>sp|SYC_SULTO|CYSTEINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 NLAPFNTALK 12
N+ P N ALK
Sbjct: 271 NIIPLNEALK 280


>sp|SYC_SULAC|CYSTEINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 NLAPFNTALK 12
N+ P N ALK
Sbjct: 272 NIIPLNEALK 281


>sp|RL21_SACS2|LARGE ribosomal subunit protein eL21|Saccharolobus solfataricus (strain

Query: 2 ENLAPFNTA 10
E+L PFN++
Sbjct: 92 EHLVPFNSS 100


>sp|MCRD_METTM|METHYL-COENZYME M reductase I operon|Methanothermobacter marburgensis (strain

Query: 1 CENLAPF 7
CE+L PF
Sbjct: 83 CEDLLPF 89


>sp|MCRD_METTH|METHYL-COENZYME M reductase I operon|Methanothermobacter thermautotrophicus

Query: 1 CENLAPF 7
CE+L PF
Sbjct: 83 CEDLLPF 89


>sp|THIM_METVS|HYDROXYETHYLTHIAZOLE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 8 NTALKLL 14
NTALKLL
Sbjct: 104 NTALKLL 110


>sp|SYTE_SACS2|THREONINE--TRNA ligase editing subunit|Saccharolobus solfataricus (strain ATCC

Query: 3 NLAPFNTALKLLK 15
NLA +TA+K+L+
Sbjct: 82 NLANPDTAIKILE 94


>sp|RL18_AERPE|LARGE ribosomal subunit protein uL18|Aeropyrum pernix (strain ATCC 700893

Query: 1 CENLAPFNTALK 12
CE++A + ALK
Sbjct: 146 CEHIAQWAEALK 157


>sp|Y1537_METJA|UNCHARACTERIZED protein MJ1537|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 PFNTALKLLK 15
PF ALKL K
Sbjct: 147 PFEEALKLTK 156




63|Sequence|311|320|PFNTALKLLK

>sp|THIM_METVS|HYDROXYETHYLTHIAZOLE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 3 NTALKLL 9
NTALKLL
Sbjct: 104 NTALKLL 110


>sp|Y1537_METJA|UNCHARACTERIZED protein MJ1537|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PFNTALKLLK 10
PF ALKL K
Sbjct: 147 PFEEALKLTK 156


>sp|Y1120_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1120|Methanocaldococcus

Query: 2 FNTALKLLK 10
F+ ALKLLK
Sbjct: 116 FDNALKLLK 124


>sp|RFHPS_METJA|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FNTALKLL 9
+NTA+K+L
Sbjct: 71 YNTAIKVL 78


>sp|THIM_METM6|HYDROXYETHYLTHIAZOLE kinase|Methanococcus maripaludis (strain C6 /

Query: 3 NTALKLL 9
NTALK+L
Sbjct: 104 NTALKIL 110






THE END