ACBD6_HUMAN Blast Output
Archaea
1|Sequence|1|10|MASSFLPAGA

>sp|HCGF_METMP|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 1 MASSFLPA 8
MAS FLP+
Sbjct: 45 MASMFLPS 52


>sp|HCGF_METM7|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 1 MASSFLPA 8
MAS FLP+
Sbjct: 45 MASMFLPS 52


>sp|HCGF_METM5|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 1 MASSFLPA 8
MAS FLP+
Sbjct: 45 MASMFLPS 52




2|Sequence|6|15|LPAGAITGDS

>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPAGAITGD 9
LP G I GD
Sbjct: 490 LPVGGIMGD 498


>sp|AMZA_HALMA|ARCHAEMETZINCIN marismortui (strain ATCC 43049

Query: 1 LPAGAITGD 9
+PAGA GD
Sbjct: 39 IPAGAYDGD 47


>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LPAGAITG 8
LP GA+TG
Sbjct: 265 LPIGAVTG 272


>sp|HEM3_HYPBU|PROBABLE porphobilinogen deaminase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LPAGAITGDS 10
LP+GAI G S
Sbjct: 118 LPSGAIVGTS 127


>sp|Y3997_METAC|UPF0288 protein MA_3997|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LPAGAITGDS 10
LPAG+ GD+
Sbjct: 19 LPAGSTLGDA 28


>sp|Y912_METMA|UPF0288 protein MM_0912|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LPAGAITGDS 10
LPAG+ GD+
Sbjct: 19 LPAGSTLGDA 28


>sp|CDPAS_METAC|CDP-ARCHAEOL synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LPAGAITGD 9
LP+GA+ GD
Sbjct: 88 LPSGALFGD 96


>sp|TRPE_ARCFU|ANTHRANILATE synthase component 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPAGAITG 8
PAG +TG
Sbjct: 322 FPAGTVTG 329


>sp|Y706_METBF|UPF0288 protein Mbar_A0706|Methanosarcina barkeri (strain Fusaro /

Query: 1 LPAGAITGDS 10
LPAG+ GD+
Sbjct: 19 LPAGSTLGDA 28


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 1 LPAGAITG 8
P GAITG
Sbjct: 274 FPIGAITG 281


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 1 LPAGAITG 8
P GAITG
Sbjct: 274 FPIGAITG 281


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LPAGAITG 8
P GAITG
Sbjct: 274 FPIGAITG 281


>sp|GSA_METM5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C5 /

Query: 1 LPAGAITG 8
P GAITG
Sbjct: 274 FPIGAITG 281


>sp|ASPD_NITMS|L-ASPARTATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LPAGAITG 8
LP+GAI G
Sbjct: 121 LPSGAIAG 128


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 1 LPAGAITG 8
+PAG ITG
Sbjct: 202 VPAGRITG 209


>sp|ENO_THEVO|ENOLASE volcanium (strain ATCC 51530

Query: 2 PAGAITGDS 10
PAGA TG++
Sbjct: 38 PAGASTGET 46


>sp|DNAG_HALLT|DNA primase DnaG|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LPAGAITGDS 10
LPAG GDS
Sbjct: 157 LPAGPRVGDS 166


>sp|IF2P_METAC|PROBABLE translation initiation factor IF-2|Methanosarcina acetivorans

Query: 1 LPAGAITGD 9
+PA A+TG+
Sbjct: 203 VPASAVTGE 211


>sp|Y1520_METJA|UNCHARACTERIZED protein MJ1520|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PAGAITGD 9
P G ITG+
Sbjct: 15 PVGCITGE 22


>sp|ENO_THEAC|ENOLASE acidophilum (strain ATCC 25905

Query: 2 PAGAITGDS 10
PAGA TG++
Sbjct: 38 PAGASTGET 46


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LPAGAITG 8
PAG +TG
Sbjct: 340 FPAGTLTG 347


>sp|ASPD_METJA|L-ASPARTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPAGAITG 8
LP+GAI G
Sbjct: 120 LPSGAIGG 127


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 GAITGDS 10
GA+TGD+
Sbjct: 783 GALTGDA 789


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 2 PAGAITGDS 10
P G TGDS
Sbjct: 239 PMGVHTGDS 247


>sp|LONB_METTH|ARCHAEAL Lon protease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LPAGAITG 8
LP G +TG
Sbjct: 559 LPVGGVTG 566


>sp|RTCA_METTH|RNA 3'-terminal phosphate cyclase|Methanothermobacter

Query: 1 LPAGAITGDS 10
+P A+TGDS
Sbjct: 287 IPYMALTGDS 296


>sp|CDPAS_METJA|CDP-ARCHAEOL synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPAGAITGDS 10
L GAI GD+
Sbjct: 96 LSVGAIVGDA 105


>sp|MOAC_METPE|PROBABLE cyclic pyranopterin monophosphate synthase|Methanosphaerula

Query: 1 LPAGAITGD 9
+P GAIT D
Sbjct: 78 IPIGAITVD 86




3|Sequence|11|20|ITGDSGGELS

>sp|DNAG_PYRNV|DNA primase DnaG|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ITGDSGGEL 9
I GD GGEL
Sbjct: 221 IDGDKGGEL 229


>sp|DNAG_PYRAE|DNA primase DnaG|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ITGDSGGEL 9
I GD GGEL
Sbjct: 221 IDGDKGGEL 229


>sp|DNAG_PYRAR|DNA primase DnaG|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ITGDSGGEL 9
I GD GGEL
Sbjct: 221 IDGDKGGEL 229


>sp|DNAG_NANEQ|DNA primase DnaG|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 ITGDSGGEL 9
I GD GGEL
Sbjct: 220 IDGDRGGEL 228


>sp|DNAG_AERPE|DNA primase DnaG|Aeropyrum pernix (strain ATCC 700893

Query: 1 ITGDSGGEL 9
+ GD GGEL
Sbjct: 217 VDGDRGGEL 225


>sp|DNAG_PYRCJ|DNA primase DnaG|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ITGDSGGEL 9
I GD GGE+
Sbjct: 221 IDGDKGGEM 229


>sp|DNAG_THEPD|DNA primase DnaG|Thermofilum pendens (strain DSM 2475

Query: 1 ITGDSGGEL 9
+ GD GGEL
Sbjct: 218 VDGDRGGEL 226


>sp|DNAG_PYRIL|DNA primase DnaG|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ITGDSGGEL 9
I GD GGE+
Sbjct: 221 IDGDKGGEI 229


>sp|DNAG_THEGJ|DNA primase DnaG|Thermococcus gammatolerans (strain DSM 15229

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 248 GDRGGEL 254


>sp|DNAG_METAC|DNA primase DnaG|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 220 GDRGGEL 226


>sp|DNAG_PYRFU|DNA primase DnaG|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 249 GDRGGEL 255


>sp|DNAG_THEKO|DNA primase DnaG|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 247 GDRGGEL 253


>sp|DNAG_PYRHO|DNA primase DnaG|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 249 GDRGGEL 255


>sp|DNAG_THEON|DNA primase DnaG|Thermococcus onnurineus (strain NA1)

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 249 GDRGGEL 255


>sp|DNAG_PYRAB|DNA primase DnaG|Pyrococcus abyssi (strain GE5 /

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 249 GDRGGEL 255


>sp|DNAG_METMA|DNA primase DnaG|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 220 GDRGGEL 226


>sp|DNAG_METBF|DNA primase DnaG|Methanosarcina barkeri (strain Fusaro /

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 220 GDRGGEL 226


>sp|DNAG_METTH|DNA primase DnaG|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ITGDSGGEL 9
+ GD GGEL
Sbjct: 220 VDGDRGGEL 228


>sp|Y145_ARCFU|UNCHARACTERIZED protein AF_0145|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ITGDSGGEL 9
ITG+ GG+L
Sbjct: 80 ITGEYGGKL 88


>sp|DNAG_METKA|DNA primase DnaG|Methanopyrus kandleri (strain AV19 /

Query: 1 ITGDSGGEL 9
+ GD GGEL
Sbjct: 222 VDGDRGGEL 230


>sp|DNAG_METM6|DNA primase DnaG|Methanococcus maripaludis (strain C6 /

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 218 GDRGGEL 224


>sp|DNAG_METM5|DNA primase DnaG|Methanococcus maripaludis (strain C5 /

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 218 GDRGGEL 224


>sp|DNAG_METJA|DNA primase DnaG|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 220 GDRGGEL 226


>sp|DNAG_METS3|DNA primase DnaG|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ITGDSGGEL 9
+ GD GGEL
Sbjct: 221 VDGDRGGEL 229


>sp|DNAG_METVS|DNA primase DnaG|Methanococcus vannielii (strain ATCC 35089

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 218 GDRGGEL 224


>sp|DNAG_METTP|DNA primase DnaG|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 220 GDRGGEL 226


>sp|DNAG_METM7|DNA primase DnaG|Methanococcus maripaludis (strain C7 /

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 218 GDRGGEL 224


>sp|DNAG_METMP|DNA primase DnaG|Methanococcus maripaludis (strain DSM 14266

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 218 GDRGGEL 224


>sp|DNAG_HYPBU|DNA primase DnaG|Hyperthermus butylicus (strain DSM 5456

Query: 1 ITGDSGGEL 9
+ GD GG+L
Sbjct: 214 VDGDHGGDL 222


>sp|DNAG_METAR|DNA primase DnaG|Methanocella arvoryzae (strain DSM 22066

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 218 GDRGGEL 224


>sp|MPNS_NITMS|METHYLPHOSPHONATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 ITGDSGGELS 10
I+GDS ELS
Sbjct: 423 ISGDSQRELS 432


>sp|DNAG_METPE|DNA primase DnaG|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 ITGDSGGEL 9
+ GD GGEL
Sbjct: 218 LDGDRGGEL 226


>sp|IF2G_HALMA|TRANSLATION initiation factor 2 subunit|Haloarcula marismortui (strain ATCC

Query: 1 ITGDSGGEL 9
I GD GGE+
Sbjct: 336 IVGDDGGEV 344


>sp|DNAG_DESA1|DNA primase DnaG|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 ITGDSGGEL 9
+ GD GG+L
Sbjct: 214 VDGDHGGDL 222


>sp|DNAG_META3|DNA primase DnaG|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 220 GDRGGEL 226


>sp|DNAG_METMJ|DNA primase DnaG|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ITGDSGGEL 9
+ GD GGEL
Sbjct: 218 LDGDRGGEL 226


>sp|DNAG_METB6|DNA primase DnaG|Methanoregula boonei (strain DSM 21154

Query: 3 GDSGGEL 9
GD GGEL
Sbjct: 220 GDRGGEL 226


>sp|DNAG_STAMF|DNA primase DnaG|Staphylothermus marinus (strain ATCC 43588

Query: 1 ITGDSGGEL 9
+ GD GG+L
Sbjct: 214 LDGDHGGDL 222


>sp|DNAG_HALLT|DNA primase DnaG|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ITGDSGGEL 9
+ GD GGEL
Sbjct: 214 LDGDRGGEL 222


>sp|FWDC_METMP|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanococcus

Query: 1 ITGDSGGEL 9
ITG++G EL
Sbjct: 151 ITGNAGSEL 159




4|Sequence|16|25|GGELSSGDDS

>sp|ADPP_METJA|ADP-RIBOSE pyrophosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGELSSGDDS 10
GGEL +GDD+
Sbjct: 129 GGELKAGDDA 138


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 1 GGELSSGDD 9
GGELSSG D
Sbjct: 408 GGELSSGFD 416


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 1 GGELSSGDD 9
GGE+SSG D
Sbjct: 404 GGEISSGFD 412


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 GGELSSGD 8
GGE+ +GD
Sbjct: 569 GGEIKAGD 576


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 GGELSSGD 8
GGE+ GD
Sbjct: 600 GGEIKPGD 607


>sp|DAPA_METLZ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 LSSGDDS 10
L+SGDDS
Sbjct: 190 LTSGDDS 196




5|Sequence|21|30|SGDDSGEVEF

>sp|ADPP_METJA|ADP-RIBOSE pyrophosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SGDDSGEVEF 10
+GDD+ E EF
Sbjct: 134 AGDDAKEAEF 143


>sp|TF2B_AERPE|TRANSCRIPTION initiation factor IIB|Aeropyrum pernix (strain ATCC 700893

Query: 1 SGDDSGEVE 9
SG++SGE++
Sbjct: 12 SGEESGEIK 20


>sp|Y1285_METTH|UNCHARACTERIZED HTH-type transcriptional regulator MTH_1285|Methanothermobacter

Query: 1 SGDDSGEVEF 10
SGDD G+ E+
Sbjct: 15 SGDDMGDDEY 24


>sp|RL4_NATPD|LARGE ribosomal subunit protein uL4|Natronomonas pharaonis (strain ATCC

Query: 2 GDDSGEVEF 10
GDD+GEVE
Sbjct: 10 GDDAGEVEL 18


>sp|RFCS_SULAC|REPLICATION factor C small subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DDSGEVEF 10
D +GEVEF
Sbjct: 288 DYAGEVEF 295


>sp|PYRI_METB6|ASPARTATE carbamoyltransferase regulatory chain|Methanoregula boonei

Query: 1 SGDDSGE 7
+GDD GE
Sbjct: 9 TGDDEGE 15


>sp|CSG_METTL|S-LAYER protein|Methanothermococcus thermolithotrophicus

Query: 3 DDSGEVEF 10
DD+GEV F
Sbjct: 181 DDAGEVVF 188


>sp|IF2G_HALWD|TRANSLATION initiation factor 2 subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GDDSGEVE 9
GD++GEVE
Sbjct: 338 GDEAGEVE 345


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 3 DDSGEVEF 10
DD+G VEF
Sbjct: 89 DDAGVVEF 96


>sp|ARCA_HALS3|ARGININE deiminase|Halobacterium salinarum (strain ATCC 29341

Query: 3 DDSGEVEF 10
DD+GEVE
Sbjct: 326 DDNGEVEM 333


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 1 SGDDSGEVEF 10
GDD+G VE
Sbjct: 58 PGDDAGVVEI 67




6|Sequence|26|35|GEVEFPHSPE

>sp|RL18_METTP|LARGE ribosomal subunit protein uL18|Methanothrix thermoacetophila

Query: 3 VEFPHSPE 10
V+ PHSPE
Sbjct: 128 VDVPHSPE 135


>sp|NFI_SACI4|ENDONUCLEASE V|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GEVEFPHSP 9
GEV FP+ P
Sbjct: 67 GEVNFPYIP 75


>sp|NFI_SACI3|ENDONUCLEASE V|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GEVEFPHSP 9
GEV FP+ P
Sbjct: 67 GEVNFPYIP 75


>sp|NFI_SACI1|ENDONUCLEASE V|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GEVEFPHSP 9
GEV FP+ P
Sbjct: 67 GEVNFPYIP 75


>sp|NFI_SACS2|ENDONUCLEASE V|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GEVEFPHSP 9
GEV FP+ P
Sbjct: 67 GEVNFPYIP 75


>sp|NFI_SACI7|ENDONUCLEASE V|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GEVEFPHSP 9
GEV FP+ P
Sbjct: 67 GEVNFPYIP 75


>sp|NFI_SACI6|ENDONUCLEASE V|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GEVEFPHSP 9
GEV FP+ P
Sbjct: 67 GEVNFPYIP 75


>sp|NFI_SACI2|ENDONUCLEASE V|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GEVEFPHSP 9
GEV FP+ P
Sbjct: 67 GEVNFPYIP 75


>sp|RNP4_METAC|RIBONUCLEASE P protein component 4|Methanosarcina acetivorans (strain ATCC

Query: 1 GEVEFPHSPE 10
+ EFP +PE
Sbjct: 28 AKAEFPENPE 37


>sp|NFI_SULAC|ENDONUCLEASE V|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GEVEFPHSP 9
G+V+FP+ P
Sbjct: 64 GKVDFPYIP 72


>sp|RL18_KORCO|LARGE ribosomal subunit protein uL18|Korarchaeum cryptofilum (strain

Query: 3 VEFPHSPE 10
++ PHSPE
Sbjct: 128 IDVPHSPE 135


>sp|Y312_METJA|UNCHARACTERIZED protein MJ0312|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GEVEFPHSPE 10
G EFP SPE
Sbjct: 150 GLKEFPLSPE 159


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EVEFPHSPE 10
+V FPH PE
Sbjct: 272 QVAFPHLPE 280


>sp|TRMY_THEKO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 2 EVEFPHSP 9
E+EFP +P
Sbjct: 143 EIEFPQNP 150


>sp|RL1_KORCO|LARGE ribosomal subunit protein uL1|Korarchaeum cryptofilum (strain

Query: 3 VEFPHSP 9
VE PHSP
Sbjct: 53 VELPHSP 59


>sp|GATD_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Sulfurisphaera tokodaii (strain DSM

Query: 1 GEVEFPHSPE 10
GE+ + H PE
Sbjct: 426 GEINYRHVPE 435


>sp|RNP4_PYRFU|RIBONUCLEASE P protein component 4|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GEVEFPHSPE 10
E FP+SPE
Sbjct: 25 AERVFPYSPE 34


>sp|RNP4_THEKO|RIBONUCLEASE P protein component 4|Thermococcus kodakarensis (strain ATCC

Query: 1 GEVEFPHSPE 10
E FP+SPE
Sbjct: 29 AERVFPYSPE 38


>sp|LEUC1_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 3 VEFPHSPE 10
V FPH PE
Sbjct: 272 VAFPHLPE 279


>sp|PFDA_AERPE|PREFOLDIN subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 1 GEVEFPHSPE 10
GE FP PE
Sbjct: 54 GETLFPGDPE 63


>sp|RNP4_METMA|RIBONUCLEASE P protein component 4|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GEVEFPHSPE 10
+VE P +PE
Sbjct: 28 AKVELPENPE 37


>sp|SFSA_METS3|SUGAR fermentation stimulation protein homolog|Methanobrevibacter smithii

Query: 1 GEVEFPHSP 9
GE FP +P
Sbjct: 146 GEARFPDAP 154


>sp|RL1_PYRAR|LARGE ribosomal subunit protein uL1|Pyrobaculum arsenaticum (strain DSM

Query: 3 VEFPHSPE 10
VE PH P+
Sbjct: 52 VELPHPPK 59


>sp|RL18_ARCFU|LARGE ribosomal subunit protein uL18|Archaeoglobus fulgidus (strain ATCC

Query: 1 GEVEFPHSPE 10
G +E PHS E
Sbjct: 128 GGLEVPHSDE 137


>sp|DCD_DESA1|DCTP deaminase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 VEFPH 7
VEFPH
Sbjct: 87 VEFPH 91


>sp|RL1_PYRIL|LARGE ribosomal subunit protein uL1|Pyrobaculum islandicum (strain DSM

Query: 3 VEFPHSPE 10
VE PH P+
Sbjct: 52 VELPHPPK 59


>sp|Y1127_METJA|UNCHARACTERIZED protein MJ1127|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GEVEFPHSP 9
GEV PH P
Sbjct: 121 GEVGRPHYP 129


>sp|RL18_AERPE|LARGE ribosomal subunit protein uL18|Aeropyrum pernix (strain ATCC 700893

Query: 3 VEFPHSPE 10
VE PHS E
Sbjct: 129 VEIPHSEE 136


>sp|AATA_NITMS|A-TYPE ATP synthase subunit A|Nitrosopumilus maritimus (strain SCM1)

Query: 3 VEFPH 7
VEFPH
Sbjct: 273 VEFPH 277




7|Sequence|31|40|PHSPEIEETS

>sp|RL18_METTP|LARGE ribosomal subunit protein uL18|Methanothrix thermoacetophila

Query: 1 PHSPEI 6
PHSPE+
Sbjct: 131 PHSPEV 136


>sp|RL18_KORCO|LARGE ribosomal subunit protein uL18|Korarchaeum cryptofilum (strain

Query: 1 PHSPEI 6
PHSPEI
Sbjct: 131 PHSPEI 136


>sp|KHSE_SULTO|HOMOSERINE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PHSPEIEETS 10
PH P+I+E S
Sbjct: 235 PHYPKIKEIS 244


>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 1 PHSPEIE 7
PH+P IE
Sbjct: 396 PHTPHIE 402


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 1 PHSPEIE 7
PH+P IE
Sbjct: 398 PHTPHIE 404


>sp|LYSY_PICTO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 HSPEIEE 8
H+PEIE+
Sbjct: 209 HTPEIEQ 215


>sp|HEM1_AERPE|GLUTAMYL-TRNA reductase|Aeropyrum pernix (strain ATCC 700893

Query: 2 HSPEIEETS 10
H PE+EE +
Sbjct: 282 HMPEVEEEA 290


>sp|RL18_PYRFU|LARGE ribosomal subunit protein uL18|Pyrococcus furiosus (strain ATCC

Query: 1 PHSPEI 6
PHSPEI
Sbjct: 132 PHSPEI 137


>sp|ARGC_META3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 HSPEIEE 8
HSPEIE+
Sbjct: 208 HSPEIEK 214


>sp|RL18_PYRHO|LARGE ribosomal subunit protein uL18|Pyrococcus horikoshii (strain ATCC

Query: 1 PHSPEI 6
PHSPEI
Sbjct: 132 PHSPEI 137


>sp|RL18_PYRAB|LARGE ribosomal subunit protein uL18|Pyrococcus abyssi (strain GE5 /

Query: 1 PHSPEI 6
PHSPEI
Sbjct: 132 PHSPEI 137


>sp|DPCKG_THEKO|GTP-DEPENDENT dephospho-CoA kinase|Thermococcus kodakarensis (strain ATCC

Query: 2 HSPEIEETS 10
+SPEIE+T+
Sbjct: 75 YSPEIEDTA 83


>sp|NIFD_METTL|NITROGENASE molybdenum-iron protein alpha chain|Methanothermococcus

Query: 1 PHSPEIEE 8
P+ PE+EE
Sbjct: 392 PNEPELEE 399


>sp|GCSPA_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 1 PHSPEIEETS 10
PH PE+ E++
Sbjct: 415 PHFPELGESA 424


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 1 PHSPEIEETS 10
HS E++ET+
Sbjct: 559 AHSKELQETA 568


>sp|Y1274_METB6|UPF0280 protein Mboo_1274|Methanoregula boonei (strain DSM 21154

Query: 1 PHSPEIEET 9
P+ PE +ET
Sbjct: 53 PYEPETDET 61


>sp|GCSPA_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 PHSPEIEETS 10
PH PE+ E++
Sbjct: 413 PHFPELGESA 422




8|Sequence|36|45|IEETSCLAEL

>sp|SURE_AERPE|5'-NUCLEOTIDASE SurE|Aeropyrum pernix (strain ATCC 700893

Query: 2 EETSCLAE 9
EET CL E
Sbjct: 134 EETDCLPE 141


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 1 IEETSCLAE 9
+EET C+ E
Sbjct: 168 VEETVCVLE 176




9|Sequence|41|50|CLAELFEKAA

>sp|COBQ_THEKO|PROBABLE cobyric acid synthase|Thermococcus kodakarensis (strain ATCC

Query: 3 AELFEKA 9
AELFEKA
Sbjct: 110 AELFEKA 116


>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM

Query: 2 LAELFEKAA 10
LAE FEK A
Sbjct: 22 LAEFFEKQA 30


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 CLAELFEK 8
CL LFEK
Sbjct: 308 CLKALFEK 315


>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus (strain

Query: 1 CLAELFEKA 9
CL EL+ +A
Sbjct: 125 CLVELYRRA 133


>sp|Y949_METJA|UNCHARACTERIZED protein MJ0949|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CLAELFEKA 9
CLA++ EKA
Sbjct: 60 CLAKIAEKA 68


>sp|DSRA_ARCFU|SULFITE reductase, dissimilatory-type subunit alpha|Archaeoglobus

Query: 3 AELFEKAA 10
AEL EKAA
Sbjct: 26 AELMEKAA 33


>sp|CETZ_METTP|TUBULIN-LIKE protein CetZ|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LAELFEKA 9
L EL+EKA
Sbjct: 328 LVELYEKA 335




10|Sequence|46|55|FEKAAAHLQG

>sp|RBL_METMA|RIBULOSE bisphosphate carboxylase|Methanosarcina mazei (strain ATCC

Query: 1 FEKAAAHLQG 10
FE+AA HL G
Sbjct: 31 FEEAATHLAG 40


>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 1 FEKAAAHLQ 9
FE+A AHL+
Sbjct: 297 FERALAHLK 305


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FEKAAAHLQG 10
FEKA AH +
Sbjct: 429 FEKAEAHYEA 438


>sp|RBL_METBF|RIBULOSE bisphosphate carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FEKAAAHLQG 10
FE+AA H+ G
Sbjct: 31 FEEAATHMAG 40


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EKAAAHLQ 9
EKAA+HL+
Sbjct: 175 EKAASHLK 182


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EKAAAHLQ 9
EKAA+HL+
Sbjct: 175 EKAASHLK 182


>sp|FDHD_THEVO|SULFUR carrier protein FdhD|Thermoplasma volcanium (strain ATCC 51530

Query: 3 KAAAHLQG 10
KAA HL G
Sbjct: 2 KAATHLNG 9


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FEKAAAHLQG 10
F+K A H++G
Sbjct: 76 FQKEAEHIKG 85


>sp|CPGS_THESM|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus sibiricus (strain

Query: 1 FEKAAAHLQ 9
EKAA HL+
Sbjct: 339 LEKAARHLE 347


>sp|SYP_THEPD|PROLINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 FEKAAAHLQG 10
FEK H++G
Sbjct: 78 FEKEKEHVEG 87


>sp|SYP_PYRFU|PROLINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FEKAAAHLQG 10
F+K A H+ G
Sbjct: 75 FQKEAEHIAG 84




11|Sequence|51|60|AHLQGLIQVA

>sp|SAND_THEX5|S-ADENOSYLMETHIONINE-DEPENDENT nucleotide dehydratase|Thermoplasmatales archaeon (strain ISO4-H5)

Query: 1 AHLQGLIQVA 10
HL+ ++QVA
Sbjct: 131 GHLENIVQVA 140


>sp|PIP_THEVO|PROLINE iminopeptidase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 AHLQGLI 7
AHL+GLI
Sbjct: 122 AHLKGLI 128


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AHLQGLIQ 8
AH++GLI+
Sbjct: 505 AHVEGLIK 512




12|Sequence|56|65|LIQVASREQL

***** No hits found ******


13|Sequence|61|70|SREQLLYLYA

>sp|FEN_PICTO|FLAP endonuclease 1|Picrophilus torridus (strain ATCC 700027

Query: 1 SREQLLYL 8
SREQL+Y+
Sbjct: 222 SREQLIYI 229


>sp|RRP4_IGNAA|EXOSOME complex component Rrp4|Ignisphaera aggregans (strain DSM 17230

Query: 3 EQLLYLY 9
+Q+LYLY
Sbjct: 34 QQILYLY 40


>sp|FEN_STAMF|FLAP endonuclease 1|Staphylothermus marinus (strain ATCC 43588

Query: 1 SREQLLYL 8
+REQL+Y+
Sbjct: 226 TREQLIYV 233


>sp|NADE_HYPBU|NH(3)-DEPENDENT NAD(+) synthetase|Hyperthermus butylicus (strain DSM 5456

Query: 2 REQLLYLYA 10
R LLYLYA
Sbjct: 125 RMTLLYLYA 133




14|Sequence|66|75|LYLYARYKQV

>sp|PUS10_METTP|TRNA pseudouridine synthase Pus10|Methanothrix thermoacetophila (strain

Query: 1 LYLYARYKQV 10
LY+Y RY+++
Sbjct: 201 LYIYGRYRKL 210


>sp|Y091_METJA|UNCHARACTERIZED membrane protein MJ0091|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LYLYARYKQV 10
LYL+A+Y ++
Sbjct: 271 LYLFAKYSKI 280


>sp|RL13_METST|LARGE ribosomal subunit protein uL13|Methanosphaera stadtmanae (strain

Query: 2 YLYARYKQ 9
++YA+YKQ
Sbjct: 45 FIYAKYKQ 52


>sp|PUS10_VULDI|TRNA pseudouridine synthase Pus10|Vulcanisaeta distributa (strain DSM

Query: 1 LYLYARYKQV 10
+Y+ ARY++V
Sbjct: 198 IYISARYRKV 207


>sp|FRHA_METTH|COENZYME F420 hydrogenase subunit alpha|Methanothermobacter

Query: 3 LYARYKQV 10
LYAR KQ+
Sbjct: 171 LYARLKQL 178


>sp|EF1A_METMA|ELONGATION factor 1-alpha|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YLYARYKQV 10
Y ARYK+V
Sbjct: 153 YSEARYKEV 161


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 2 YLYARYKQ 9
YLY YK+
Sbjct: 735 YLYKTYKE 742


>sp|XACH_HALVD|XYLOSE/ARABINOSE import permease protein XacH|Haloferax volcanii (strain ATCC 29605

Query: 2 YLYARYKQ 9
YLY +YKQ
Sbjct: 307 YLYYQYKQ 314




15|Sequence|71|80|RYKQVKVGNC

>sp|SFSA_SACS2|SUGAR fermentation stimulation protein homolog|Saccharolobus solfataricus

Query: 3 KQVKVGN 9
K+VKVGN
Sbjct: 118 KEVKVGN 124


>sp|RS12_ARCFU|SMALL ribosomal subunit protein uS12|Archaeoglobus fulgidus (strain ATCC

Query: 1 RYKQVKVGN 9
RYK VKV N
Sbjct: 118 RYKVVKVNN 126


>sp|SFSA_SACI2|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 3 KQVKVGN 9
K++KVGN
Sbjct: 118 KEIKVGN 124


>sp|Y1170_THEAC|PUTATIVE sulfur carrier protein Ta1170/Ta1414|Thermoplasma acidophilum

Query: 2 YKQVKVGNC 10
YKQ KVG
Sbjct: 27 YKQAKVGEV 35


>sp|Y1496_METJA|UPF0127 protein MJ1496|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RYKQVKVGN 9
+ K+VKVGN
Sbjct: 5 KIKKVKVGN 13


>sp|SFSA_SACI4|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 3 KQVKVGN 9
K++KVGN
Sbjct: 118 KEIKVGN 124


>sp|Y1387_METJA|PUTATIVE nickel insertion protein|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YKQVKVGN 9
YK + VGN
Sbjct: 143 YKPINVGN 150


>sp|SFSA_SACI6|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 3 KQVKVGN 9
K++KVGN
Sbjct: 118 KEIKVGN 124


>sp|SFSA_SACI3|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 3 KQVKVGN 9
K++KVGN
Sbjct: 118 KEIKVGN 124




16|Sequence|76|85|KVGNCNTPKP

>sp|PPAC_ARCFU|PROBABLE manganese-dependent inorganic pyrophosphatase|Archaeoglobus

Query: 1 KVGNCNTPKP 10
K+G+ TP+P
Sbjct: 110 KIGDVTTPQP 119


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VGNCNTPKP 10
VG C++P P
Sbjct: 280 VGGCDSPLP 288


>sp|TRUB_KORCO|PROBABLE tRNA pseudouridine synthase B|Korarchaeum cryptofilum (strain

Query: 1 KVGNCNTPKP 10
KVG+C T P
Sbjct: 63 KVGHCGTLDP 72


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 NCNTPK 9
NCN+PK
Sbjct: 146 NCNSPK 151


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 4 NCNTPK 9
NCN+PK
Sbjct: 146 NCNSPK 151


>sp|Y2165_ARCFU|UNCHARACTERIZED protein AF_2165|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KVGNCN 6
+VGNCN
Sbjct: 239 EVGNCN 244


>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 CNTPK 9
CNTPK
Sbjct: 126 CNTPK 130


>sp|RL18_DESA1|LARGE ribosomal subunit protein uL18|Desulfurococcus amylolyticus

Query: 1 KVGNCNT 7
K G CNT
Sbjct: 74 KAGTCNT 80


>sp|AROA_META3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus aeolicus (strain ATCC

Query: 2 VGNCNTPK 9
VGN N+PK
Sbjct: 73 VGNNNSPK 80




17|Sequence|81|90|NTPKPSFFDF

>sp|AROC_METS3|CHORISMATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 NTPKPSFFDF 10
NTP+PS D+
Sbjct: 99 NTPRPSHGDY 108


>sp|OGT_PYRSN|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus sp. (strain NA2)

Query: 2 TPKPSFFDF 10
TPKPS+ F
Sbjct: 156 TPKPSYKKF 164


>sp|OGT_PYRHO|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TPKPSFFDF 10
TPKPS+ F
Sbjct: 155 TPKPSYKKF 163


>sp|TRMBR_HALSA|HTH-TYPE sugar sensing transcriptional regulator|Halobacterium salinarum

Query: 1 NTPKPSFFDF 10
N P P FD+
Sbjct: 171 NAPNPDAFDY 180


>sp|RNP3_METBF|RIBONUCLEASE P protein component 3|Methanosarcina barkeri (strain Fusaro /

Query: 4 KPSFFDF 10
KP F+DF
Sbjct: 3 KPKFYDF 9


>sp|RNP3_METMA|RIBONUCLEASE P protein component 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 KPSFFDF 10
KP F+DF
Sbjct: 3 KPEFYDF 9


>sp|RNP3_METAC|RIBONUCLEASE P protein component 3|Methanosarcina acetivorans (strain ATCC

Query: 4 KPSFFDF 10
KP F+DF
Sbjct: 3 KPKFYDF 9


>sp|CSG_METJA|S-LAYER protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NTPKPSFFD 9
+T KPSF D
Sbjct: 139 DTGKPSFMD 147


>sp|SYR_META3|ARGININE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NTPKPSFFDF 10
NTP+ F++F
Sbjct: 357 NTPEVVFYEF 366


>sp|THIM_METLZ|HYDROXYETHYLTHIAZOLE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 KPSFFD 9
KP+FFD
Sbjct: 239 KPAFFD 244


>sp|GSA_THEAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 TPKPSFFDF 10
TP+P F +F
Sbjct: 210 TPEPGFLEF 218


>sp|COMB_THEVO|PROBABLE 2-phosphosulfolactate phosphatase|Thermoplasma volcanium (strain

Query: 4 KPSFFDF 10
KP FFD+
Sbjct: 69 KPPFFDY 75


>sp|MFNA_METB6|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoregula boonei (strain

Query: 3 PKPSFFDF 10
PKP FDF
Sbjct: 203 PKPVPFDF 210


>sp|CBIM_METST|PUTATIVE cobalt transport protein CbiM|Methanosphaera stadtmanae (strain

Query: 3 PKPSFF 8
PKP FF
Sbjct: 165 PKPDFF 170


>sp|DTDA_IGNH4|D-AMINOACYL-TRNA deacylase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 PSFFDF 10
P FFDF
Sbjct: 36 PPFFDF 41




18|Sequence|86|95|SFFDFEGKQK

>sp|LYSY_PYRHO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 FFDFEGKQK 10
+F FEG +K
Sbjct: 229 YFTFEGNEK 237


>sp|LYSY_PYRAB|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 SFFDFEGKQK 10
++F FEG +K
Sbjct: 228 TYFKFEGSEK 237


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FFDFEGKQK 10
F DF GK+K
Sbjct: 436 FLDFRGKEK 444


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SFFDFEGK 8
S F FEGK
Sbjct: 110 SLFGFEGK 117


>sp|Y1676_SACI1|UPF0201 protein YN1551_1676|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 SFFDFE 6
+FFDFE
Sbjct: 25 NFFDFE 30


>sp|Y1276_SACI2|UPF0201 protein LS215_1276|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 SFFDFE 6
+FFDFE
Sbjct: 25 NFFDFE 30


>sp|Y1243_SACI3|UPF0201 protein M1627_1243|Saccharolobus islandicus (strain M.16.27)

Query: 1 SFFDFE 6
+FFDFE
Sbjct: 25 NFFDFE 30


>sp|Y1179_SACI4|UPF0201 protein M1425_1179|Saccharolobus islandicus (strain M.14.25 /

Query: 1 SFFDFE 6
+FFDFE
Sbjct: 25 NFFDFE 30


>sp|Y1175_SACI7|UPF0201 protein YG5714_1175|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 SFFDFE 6
+FFDFE
Sbjct: 25 NFFDFE 30


>sp|Y1168_SACI6|UPF0201 protein M164_1168|Saccharolobus islandicus (strain M.16.4 /

Query: 1 SFFDFE 6
+FFDFE
Sbjct: 25 NFFDFE 30


>sp|CAPPA_HALSA|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 700922

Query: 3 FDFEGKQ 9
+DFEGK+
Sbjct: 50 WDFEGKE 56


>sp|CAPPA_HALS3|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 29341

Query: 3 FDFEGKQ 9
+DFEGK+
Sbjct: 50 WDFEGKE 56


>sp|Y1042_SACS2|UPF0201 protein SSO1042|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SFFDFE 6
+FFDFE
Sbjct: 25 NFFDFE 30


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 SFFDFEGK 8
+ +DFEGK
Sbjct: 48 TMWDFEGK 55


>sp|CAPPA_PYRFU|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FDFEGKQ 9
+DFEGK+
Sbjct: 48 WDFEGKE 54


>sp|CAPPA_PYRAB|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 3 FDFEGKQ 9
+DFEGK+
Sbjct: 48 WDFEGKE 54


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 FFDFEGKQ 9
+F+F+GK+
Sbjct: 540 YFEFKGKK 547


>sp|CCA_THEVO|CCA-ADDING enzyme|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SFFDFEGK 8
SFFD E K
Sbjct: 252 SFFDLERK 259


>sp|CAPPA_PYRHO|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 FDFEGKQ 9
+DFEGK+
Sbjct: 48 WDFEGKE 54


>sp|SYT_META3|THREONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FFDFEGKQK 10
+ +FE KQK
Sbjct: 10 YLEFEAKQK 18




19|Sequence|91|100|EGKQKWEAWK

>sp|RS10_SULAC|SMALL ribosomal subunit protein uS10|Sulfolobus acidocaldarius (strain

Query: 1 EGKQKWEAWK 10
EGK+KWE W+
Sbjct: 57 EGKKKWEHWE 66


>sp|RS10_SULTO|SMALL ribosomal subunit protein uS10|Sulfurisphaera tokodaii (strain

Query: 1 EGKQKWEAWK 10
EGK+KWE W+
Sbjct: 57 EGKKKWEHWE 66


>sp|HEM1_METHJ|GLUTAMYL-TRNA reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EGKQKWEAWK 10
EG+ W+ WK
Sbjct: 73 EGRAGWQMWK 82


>sp|RS10_SACS2|SMALL ribosomal subunit protein uS10|Saccharolobus solfataricus (strain

Query: 1 EGKQKWEAWK 10
EG++KWE W+
Sbjct: 57 EGRKKWEKWE 66


>sp|RS10_SACI7|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 1 EGKQKWEAWK 10
EG++KWE W+
Sbjct: 57 EGRKKWEKWE 66


>sp|RS10_SACI6|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 1 EGKQKWEAWK 10
EG++KWE W+
Sbjct: 57 EGRKKWEKWE 66


>sp|RS10_SACI4|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 1 EGKQKWEAWK 10
EG++KWE W+
Sbjct: 57 EGRKKWEKWE 66


>sp|RS10_SACI3|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 1 EGKQKWEAWK 10
EG++KWE W+
Sbjct: 57 EGRKKWEKWE 66


>sp|RS10_SACI2|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 1 EGKQKWEAWK 10
EG++KWE W+
Sbjct: 57 EGRKKWEKWE 66


>sp|RS10_SACI1|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 1 EGKQKWEAWK 10
EG++KWE W+
Sbjct: 57 EGRKKWEKWE 66


>sp|RS10_METS5|SMALL ribosomal subunit protein uS10|Metallosphaera sedula (strain ATCC

Query: 1 EGKQKWEAWK 10
EG++KWE W+
Sbjct: 57 EGRKKWEKWE 66


>sp|PYRH_PYRAB|URIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 6 WEAWK 10
WEAWK
Sbjct: 97 WEAWK 101


>sp|PYRH_PYRHO|URIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 WEAWK 10
WEAWK
Sbjct: 97 WEAWK 101


>sp|RRP42_SULTO|EXOSOME complex component Rrp42|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GKQKWEAW 9
GK+ W AW
Sbjct: 134 GKKVWTAW 141


>sp|GCSPA_METS5|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Metallosphaera

Query: 2 GKQKWEA 8
GK+KWE+
Sbjct: 380 GKRKWES 386


>sp|Y863_ARCFU|UNCHARACTERIZED protein AF_0863|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 WEAWK 10
WEAW+
Sbjct: 13 WEAWR 17


>sp|RS10_HYPBU|SMALL ribosomal subunit protein uS10|Hyperthermus butylicus (strain DSM

Query: 1 EGKQKWEAWK 10
EG +KW+ W+
Sbjct: 57 EGSKKWDKWE 66


>sp|RS11_METHJ|SMALL ribosomal subunit protein uS11|Methanospirillum hungatei JF-1

Query: 1 EGKQKW 6
EGK+KW
Sbjct: 3 EGKEKW 8


>sp|PUR5_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EGKQKWE 7
EGK+ WE
Sbjct: 207 EGKKLWE 213


>sp|RS10_ARCFU|SMALL ribosomal subunit protein uS10|Archaeoglobus fulgidus (strain

Query: 1 EGKQKWEAWK 10
EG + W+ W+
Sbjct: 60 EGSETWDHWE 69


>sp|GLCD1_VULM7|GLUCOSE 1-dehydrogenase 1|Vulcanisaeta moutnovskia (strain 768-28)

Query: 2 GKQKWEAW 9
GK ++E+W
Sbjct: 165 GKARFESW 172


>sp|RS10_METS3|SMALL ribosomal subunit protein uS10|Methanobrevibacter smithii (strain

Query: 1 EGKQKWEAW 9
EGK WE W
Sbjct: 56 EGKASWEKW 64


>sp|DPCKG_AERPE|GTP-DEPENDENT dephospho-CoA kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EGKQKWEAWK 10
+GK + E+W+
Sbjct: 73 DGKTRRESWR 82


>sp|FEN_METHJ|FLAP endonuclease 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EGKQKWEAWK 10
E K+KW+ K
Sbjct: 101 ESKEKWDQAK 110


>sp|RS10_METST|SMALL ribosomal subunit protein uS10|Methanosphaera stadtmanae (strain

Query: 1 EGKQKWEAW 9
EGK WE W
Sbjct: 56 EGKATWEKW 64


>sp|RS10_METKA|SMALL ribosomal subunit protein uS10|Methanopyrus kandleri (strain AV19

Query: 1 EGKQKWEAWK 10
EGK W+ W+
Sbjct: 57 EGKATWDKWE 66


>sp|CDPAS_METB6|CDP-ARCHAEOL synthase|Methanoregula boonei (strain DSM 21154

Query: 2 GKQKWEAW 9
GK++ EAW
Sbjct: 97 GKERGEAW 104


>sp|RL2_ARCFU|LARGE ribosomal subunit protein uL2|Archaeoglobus fulgidus (strain ATCC

Query: 2 GKQKW 6
GKQKW
Sbjct: 143 GKQKW 147


>sp|RS10_METTP|SMALL ribosomal subunit protein uS10|Methanothrix thermoacetophila

Query: 1 EGKQKWEAWK 10
EG W+ W+
Sbjct: 56 EGSATWDHWE 65


>sp|RPO3_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EGKQKWE 7
EGK+ WE
Sbjct: 209 EGKEIWE 215


>sp|RS10_METPE|SMALL ribosomal subunit protein uS10|Methanosphaerula palustris (strain

Query: 1 EGKQKWEAWK 10
EG W+ W+
Sbjct: 56 EGTATWDRWQ 65


>sp|RS10_DESMO|SMALL ribosomal subunit protein uS10|Desulfurococcus mucosus

Query: 1 EGKQKWEAWK 10
EGK+K+E W+
Sbjct: 54 EGKKKYEKWE 63


>sp|RS8_METKA|SMALL ribosomal subunit protein uS8|Methanopyrus kandleri (strain AV19

Query: 3 KQKWEAWK 10
K +WE W+
Sbjct: 83 KDEWEYWE 90


>sp|RS10_METLZ|SMALL ribosomal subunit protein uS10|Methanocorpusculum labreanum

Query: 1 EGKQKWEAWK 10
EG W+ W+
Sbjct: 56 EGTATWDRWQ 65


>sp|RS10_PICTO|SMALL ribosomal subunit protein uS10|Picrophilus torridus (strain ATCC

Query: 1 EGKQKWEAWK 10
EG W+ W+
Sbjct: 57 EGSPTWDRWE 66




20|Sequence|96|105|WEAWKALGDS

>sp|PYRH_PYRHO|URIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WEAWKAL 7
WEAWKA+
Sbjct: 97 WEAWKAI 103


>sp|PYRH_PYRAB|URIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 WEAWKAL 7
WEAWKA+
Sbjct: 97 WEAWKAI 103


>sp|PYRH_PYRFU|URIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WEAWKAL 7
WEAWKA+
Sbjct: 97 WEAWKAV 103


>sp|Y798_METJA|TPR repeat-containing protein MJ0798|Methanocaldococcus jannaschii

Query: 1 WEAWKALGD 9
W+ WK LGD
Sbjct: 102 WKLWKNLGD 110


>sp|MVP5K_THEAC|MEVALONATE-3-PHOSPHATE 5-kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WEAWKALGD 9
++AWK GD
Sbjct: 57 YDAWKFYGD 65


>sp|AGL13_HALVD|PROBABLE low-salt glycan biosynthesis epimerase|Haloferax volcanii (strain

Query: 1 WEAWKALGD 9
W +KA+GD
Sbjct: 108 WHGFKAIGD 116


>sp|AROK_METTP|SHIKIMATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 EAWKALG 8
EAW +LG
Sbjct: 257 EAWSSLG 263


>sp|SERK_DESM0|ATP-DEPENDENT L-serine kinase|Desulfurococcus mucosus (strain ATCC 35584

Query: 1 WEAWKALG 8
W A KALG
Sbjct: 80 WAAVKALG 87


>sp|SERK_DESA1|ATP-DEPENDENT L-serine kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 WEAWKALG 8
W A KALG
Sbjct: 80 WAAVKALG 87


>sp|PGK2_METVS|2-PHOSPHOGLYCERATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 WEAWKALGDS 10
+ AWKAL S
Sbjct: 151 YTAWKALRHS 160


>sp|DPDH_PYRIL|D-PROLINE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 WEAWKALGD 9
WEA K LG+
Sbjct: 99 WEAIKTLGE 107


>sp|RL2_METS3|LARGE ribosomal subunit protein uL2|Methanobrevibacter smithii (strain

Query: 1 WEAWKALG 8
W A+KA G
Sbjct: 180 WHAYKAKG 187


>sp|Y863_ARCFU|UNCHARACTERIZED protein AF_0863|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WEAWK 5
WEAW+
Sbjct: 13 WEAWR 17


>sp|RL15E_HALWD|LARGE ribosomal subunit protein eL15|Haloquadratum walsbyi (strain DSM

Query: 2 EAWKALGD 9
EAWK GD
Sbjct: 11 EAWKQPGD 18


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 WEAWK 5
W+AWK
Sbjct: 184 WKAWK 188


>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WEAWK 5
W+AWK
Sbjct: 184 WKAWK 188


>sp|AROK_PYRAB|SHIKIMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 EAWKALGD 9
EAW + GD
Sbjct: 260 EAWSSFGD 267




21|Sequence|101|110|ALGDSSPSQA

>sp|HPCAS_SULTO|3-HYDROXYPROPIONYL-COENZYME A synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LGDSSPSQ 9
LGD SP Q
Sbjct: 211 LGDKSPVQ 218




22|Sequence|106|115|SPSQAMQEYI

>sp|Y612_METJA|PROBABLE arogenate/prephenate dehydrogenase|Methanocaldococcus jannaschii

Query: 2 PSQAMQEYI 10
PS+AM+E++
Sbjct: 103 PSKAMEEHV 111




23|Sequence|111|120|MQEYIAVVKK

>sp|PDXT_THEVO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Thermoplasma volcanium (strain

Query: 1 MQEYIAVVKK 10
++E+IA+VKK
Sbjct: 12 VEEHIAIVKK 21




24|Sequence|116|125|AVVKKLDPGW

>sp|GSA_METBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcoides burtonii (strain DSM 6242

Query: 1 AVVKKLDPGW 10
A++ +LD GW
Sbjct: 74 AIIDQLDKGW 83


>sp|MPGS_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AVVKKLDPGW 10
A+V + DP W
Sbjct: 112 AIVYQFDPAW 121


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 2 VVKKLDPGW 10
V +KLD GW
Sbjct: 402 VAEKLDIGW 410


>sp|GSA_METAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AVVKKLDPGW 10
A+ ++LD GW
Sbjct: 77 AIKEQLDKGW 86


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AVVKKLDPG 9
A+VK+L PG
Sbjct: 342 ALVKRLGPG 350


>sp|GSA_METMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AVVKKLDPGW 10
A+ ++LD GW
Sbjct: 77 AIRQQLDRGW 86


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 2 VVKKLDPGW 10
VVK+L PG+
Sbjct: 920 VVKRLPPGF 928


>sp|EF1A_METHJ|ELONGATION factor 1-alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 VVKKLDP 8
+VKKLDP
Sbjct: 353 LVKKLDP 359


>sp|GSA_METLZ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AVVKKLDPGW 10
A+ +LD GW
Sbjct: 70 AIEAQLDAGW 79


>sp|GSA_METBF|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 AVVKKLDPGW 10
A+ +LD GW
Sbjct: 77 AIKAQLDKGW 86


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AVVKKLDPG 9
AVVKK+D G
Sbjct: 358 AVVKKIDGG 366


>sp|FTSY_METAC|SIGNAL recognition particle receptor FtsY|Methanosarcina acetivorans

Query: 3 VKKLDPGW 10
+KK DP W
Sbjct: 402 LKKFDPEW 409


>sp|DHQS_METVS|3-DEHYDROQUINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 AVVKKLDP 8
AV+KK++P
Sbjct: 187 AVIKKIEP 194


>sp|SURE_PICTO|5'-NUCLEOTIDASE SurE|Picrophilus torridus (strain ATCC 700027

Query: 2 VVKKLDP 8
++K+LDP
Sbjct: 187 IIKRLDP 193


>sp|HPRL1_HALTV|HGPRTASE-LIKE protein 1|Haloterrigena turkmenica (strain ATCC 51198

Query: 3 VKKLDPG 9
V KLDPG
Sbjct: 30 VPKLDPG 36


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VVKKLDPG 9
+VKK DPG
Sbjct: 346 LVKKDDPG 353


>sp|GLNA_SACS2|GLUTAMINE synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AVVKKLDPG 9
V KK+DPG
Sbjct: 384 GVNKKIDPG 392


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AVVKKLDPG 9
AVVKK+D G
Sbjct: 358 AVVKKIDGG 366


>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 2 VVKKLDPG 9
VVKK+D G
Sbjct: 578 VVKKMDDG 585


>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AVVKKLDPG 9
+ +KLDPG
Sbjct: 386 GIRRKLDPG 394


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 5 KLDPGW 10
KLDP W
Sbjct: 245 KLDPYW 250


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 5 KLDPGW 10
KLDP W
Sbjct: 245 KLDPYW 250


>sp|KUP_METAC|PROBABLE potassium transport system protein|Methanosarcina acetivorans

Query: 1 AVVKKLDPGW 10
+V+KKL P +
Sbjct: 574 SVIKKLSPSF 583


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 1 AVVKKLDP 8
A+ KKLDP
Sbjct: 351 AINKKLDP 358


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 VVKKLDPG 9
V+KKLD G
Sbjct: 485 VIKKLDIG 492


>sp|GYAR_AERPE|GLYOXYLATE reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AVVKKLDPGW 10
A+VK L GW
Sbjct: 250 ALVKALREGW 259


>sp|GLNA_ARCFU|GLUTAMINE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AVVKKLDPG 9
+ KK+DPG
Sbjct: 405 GIKKKIDPG 413


>sp|FEOA_METJA|PUTATIVE Fe(2+) transport protein A|Methanocaldococcus jannaschii (strain

Query: 2 VVKKLDPG 9
+VKK+D G
Sbjct: 14 IVKKIDAG 21


>sp|ARCC_THEVO|CARBAMATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VVKKLDPGW 10
V+KK GW
Sbjct: 144 VMKKFKDGW 152




25|Sequence|121|130|LDPGWNPQIP

>sp|IF2P_HALLT|PROBABLE translation initiation factor IF-2|Halorubrum lacusprofundi (strain

Query: 3 PGWNPQ 8
PGWNPQ
Sbjct: 141 PGWNPQ 146


>sp|IF2P_HALMA|PROBABLE translation initiation factor IF-2|Haloarcula marismortui (strain

Query: 3 PGWNP 7
PGWNP
Sbjct: 145 PGWNP 149


>sp|IF2P_METBU|PROBABLE translation initiation factor IF-2|Methanococcoides burtonii

Query: 4 GWNPQ 8
GWNPQ
Sbjct: 139 GWNPQ 143


>sp|IF2P_HALSA|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 3 PGWNP 7
PGWNP
Sbjct: 144 PGWNP 148


>sp|IF2P_HALS3|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 3 PGWNP 7
PGWNP
Sbjct: 144 PGWNP 148


>sp|IF2P_NATPD|PROBABLE translation initiation factor IF-2|Natronomonas pharaonis (strain

Query: 3 PGWNP 7
PGWNP
Sbjct: 146 PGWNP 150


>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 1 LDPGWNP 7
DP W+P
Sbjct: 27 FDPAWSP 33


>sp|Y480_METJA|UNCHARACTERIZED protein MJ0480|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDPGWN 6
L+PGWN
Sbjct: 130 LNPGWN 135


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 2 DPGWNP 7
DP W+P
Sbjct: 28 DPSWSP 33


>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 4 GWNPQI 9
GW PQI
Sbjct: 194 GWAPQI 199


>sp|Y1471_METMP|UNCHARACTERIZED protein MMP1471|Methanococcus maripaludis (strain DSM 14266

Query: 3 PGWNPQ 8
P WNP+
Sbjct: 203 PKWNPK 208


>sp|Y1618_ARCFU|UNCHARACTERIZED protein AF_1618|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GWNPQ 8
GWNP+
Sbjct: 8 GWNPE 12


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GWNPQI 9
GWNP +
Sbjct: 248 GWNPPV 253


>sp|KMT_SACI5|PROTEIN-LYSINE N-methyltransferase|Saccharolobus islandicus (strain REY15A)

Query: 4 GWNPQ 8
GWNP+
Sbjct: 134 GWNPK 138


>sp|VHUA_METVO|F420-NON-REDUCING hydrogenase vhu subunit A|Methanococcus voltae

Query: 1 LDPGWNPQIP 10
+D W QIP
Sbjct: 76 VDAAWGAQIP 85


>sp|AKSA_METKA|HOMOCITRATE synthase AksA|Methanopyrus kandleri (strain AV19 /

Query: 1 LDPGWNPQI 9
+DPG+N ++
Sbjct: 260 IDPGFNTEV 268


>sp|DNLI_METPE|DNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 PGWNPQ 8
P W+PQ
Sbjct: 51 PDWSPQ 56


>sp|Y2062_SULTO|MEMO1 family protein STK_20620|Sulfurisphaera tokodaii (strain DSM

Query: 1 LDPGWNPQIP 10
L PG PQ+P
Sbjct: 31 LGPGKIPQVP 40


>sp|IF2P_HALWD|PROBABLE translation initiation factor IF-2|Haloquadratum walsbyi (strain

Query: 3 PGWNP 7
PGW P
Sbjct: 164 PGWTP 168


>sp|DCD_THESM|DCTP deaminase|Thermococcus sibiricus (strain DSM 12597

Query: 1 LDPGWN 6
+DPGW+
Sbjct: 94 VDPGWD 99


>sp|CSA1_THETK|CRISPR-ASSOCIATED exonuclease Csa1|Thermoproteus tenax (strain ATCC 35583

Query: 2 DPGWNPQIP 10
DPG PQ P
Sbjct: 259 DPGPAPQCP 267


>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 2 DPGWN 6
DP WN
Sbjct: 199 DPNWN 203


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 DPGWNP 7
+P WNP
Sbjct: 387 NPKWNP 392


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DPGWNPQI 9
D GWN ++
Sbjct: 12 DSGWNGRV 19


>sp|DCD_PYRAB|DCTP deaminase|Pyrococcus abyssi (strain GE5 /

Query: 1 LDPGWN 6
+DPGW+
Sbjct: 94 VDPGWD 99


>sp|GALE_METJA|PUTATIVE UDP-glucose 4-epimerase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 GWNPQI 9
GW P+I
Sbjct: 281 GWKPEI 286


>sp|Y667_METM6|UPF0248 protein MmarC6_0667|Methanococcus maripaludis (strain C6 /

Query: 3 PGWNPQ 8
PG+NP+
Sbjct: 13 PGYNPE 18


>sp|OFOB1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 2 DPGWNP 7
DP W+P
Sbjct: 223 DPSWDP 228


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DPGWNP 7
DP W P
Sbjct: 422 DPNWEP 427


>sp|DCD_THEKO|DCTP deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LDPGWN 6
+DPGW+
Sbjct: 94 VDPGWD 99


>sp|DCD_THEGJ|DCTP deaminase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LDPGWN 6
+DPGW+
Sbjct: 94 VDPGWD 99


>sp|DCD_PYRFU|DCTP deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LDPGWN 6
+DPGW+
Sbjct: 94 VDPGWD 99




26|Sequence|126|135|NPQIPEKKGK

>sp|CBIA_PICTO|COBYRINATE a,c-diamide synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 NPQIPEK 7
NP+IPE+
Sbjct: 426 NPRIPER 432


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NPQIPEKKGK 10
NP+ PE+ G+
Sbjct: 539 NPEKPERMGE 548


>sp|RACD_PYRHO|ASPARTATE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NPQIPEK 7
NPQIP++
Sbjct: 42 NPQIPDR 48


>sp|Y1574_METJA|UNCHARACTERIZED ATP-dependent helicase MJ1574|Methanocaldococcus jannaschii

Query: 3 QIPEKKGK 10
+IPE+KG+
Sbjct: 17 KIPERKGR 24


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 1 NPQIPEKKG 9
+PQIPE +G
Sbjct: 113 SPQIPEIEG 121


>sp|ARLY_ARCFU|ARGININOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NPQIPEKKG 9
NP+I E+K
Sbjct: 343 NPEITERKA 351


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NPQIPEKKGK 10
+P +P+ KGK
Sbjct: 911 DPTVPDVKGK 920


>sp|GATA_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfurisphaera tokodaii (strain DSM

Query: 2 PQIPEK 7
PQ+PEK
Sbjct: 235 PQVPEK 240


>sp|SPEE_THEVO|POLYAMINE aminopropyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NPQIPEKKGK 10
NP+ P KGK
Sbjct: 242 NPRKPAIKGK 251


>sp|NREA_ARCFU|DNA repair protein NreA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NPQIPEKKGK 10
NP+IP+K K
Sbjct: 158 NPKIPDKVEK 167


>sp|APGM_METMJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanoculleus marisnigri (strain ATCC

Query: 2 PQIPEKKG 9
PQ PE+ G
Sbjct: 238 PQFPERYG 245


>sp|Y1195_METTH|UNCHARACTERIZED protein MTH_1195|Methanothermobacter thermautotrophicus (strain

Query: 1 NPQIPE 6
NP+IPE
Sbjct: 146 NPKIPE 151


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NPQIPEK 7
NPQ PE+
Sbjct: 81 NPQYPER 87


>sp|SFSA_SULTO|SUGAR fermentation stimulation protein homolog|Sulfurisphaera tokodaii

Query: 2 PQIPEKKGK 10
P P K+GK
Sbjct: 129 PDAPTKRGK 137


>sp|THS_METJA|THERMOSOME subunit|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NPQIPEK 7
NPQ+P+K
Sbjct: 224 NPQMPKK 230


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 3 QIPEKKGK 10
QIPE +GK
Sbjct: 39 QIPELEGK 46




27|Sequence|131|140|EKKGKEANTG

>sp|TF2B_PYRAR|TRANSCRIPTION initiation factor IIB|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EKKGKEANTG 10
E+KG+ A TG
Sbjct: 80 EEKGQRARTG 89


>sp|TF2B_PYRIL|TRANSCRIPTION initiation factor IIB|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EKKGKEANTG 10
E+KG+ A TG
Sbjct: 80 EEKGQRARTG 89




28|Sequence|136|145|EANTGFGGPV

>sp|RL32_METMP|LARGE ribosomal subunit protein eL32|Methanococcus maripaludis (strain

Query: 3 NTGFGGPV 10
NTG+ GPV
Sbjct: 58 NTGYRGPV 65


>sp|HUTH_THEVO|PROBABLE histidine ammonia-lyase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 NTGFGG 8
NTGFGG
Sbjct: 55 NTGFGG 60


>sp|IDI2_METMP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EANTGFGGPV 10
E N+ F GP+
Sbjct: 262 EVNSAFSGPI 271


>sp|DTDA_SACS2|D-AMINOACYL-TRNA deacylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 TGFGGP 9
+GFGGP
Sbjct: 159 SGFGGP 164


>sp|DTDA_SACI7|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 TGFGGP 9
+GFGGP
Sbjct: 159 SGFGGP 164


>sp|DTDA_SACI6|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 TGFGGP 9
+GFGGP
Sbjct: 159 SGFGGP 164


>sp|DTDA_SACI4|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 TGFGGP 9
+GFGGP
Sbjct: 159 SGFGGP 164


>sp|DTDA_SACI3|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 TGFGGP 9
+GFGGP
Sbjct: 159 SGFGGP 164


>sp|DTDA_SACI2|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 TGFGGP 9
+GFGGP
Sbjct: 159 SGFGGP 164


>sp|DTDA_SACI1|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 TGFGGP 9
+GFGGP
Sbjct: 159 SGFGGP 164


>sp|DTDA_SULAC|D-AMINOACYL-TRNA deacylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EANTGFGGP 9
E GFGGP
Sbjct: 156 EIIVGFGGP 164


>sp|RL32_ARCFU|LARGE ribosomal subunit protein eL32|Archaeoglobus fulgidus (strain

Query: 3 NTGFGGP 9
N GFG P
Sbjct: 61 NVGFGSP 67


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 EANTGFGGP 9
+AN G+G P
Sbjct: 855 KANVGYGHP 863


>sp|Y1830_SULTO|UPF0273 protein STK_18300|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 GFGGP 9
GFGGP
Sbjct: 180 GFGGP 184


>sp|Y1861_SACS2|UPF0273 protein SSO1861|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 GFGGP 9
GFGGP
Sbjct: 177 GFGGP 181


>sp|UREG_HALWD|UREASE accessory protein UreG|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ANTGFGGPV 10
A G GGPV
Sbjct: 7 AKVGLGGPV 15


>sp|Y1761_METMA|MEMO1 family protein MM_1761|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 NTGFGGPV 10
+TG+G PV
Sbjct: 75 HTGYGSPV 82


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 NTGFGGPV 10
NTG GP+
Sbjct: 721 NTGLVGPI 728


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 NTGFGGP 9
NT +GGP
Sbjct: 723 NTVYGGP 729


>sp|UREG_NATPD|UREASE accessory protein UreG|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ANTGFGGPV 10
A G GGPV
Sbjct: 7 ATVGLGGPV 15


>sp|UREG_HALMA|UREASE accessory protein UreG|Haloarcula marismortui (strain ATCC 43049

Query: 2 ANTGFGGPV 10
A G GGPV
Sbjct: 9 ATVGIGGPV 17


>sp|Y258_PYRAB|UPF0273 protein PYRAB02580|Pyrococcus abyssi (strain GE5 /

Query: 5 GFGGP 9
GFGGP
Sbjct: 178 GFGGP 182


>sp|Y1931_PYRFU|UPF0273 protein PF1931|Pyrococcus furiosus (strain ATCC 43587

Query: 5 GFGGP 9
GFGGP
Sbjct: 178 GFGGP 182


>sp|Y1590_THEKO|UPF0273 protein TK1590|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 GFGGP 9
GFGGP
Sbjct: 178 GFGGP 182


>sp|Y1359_METJA|UPF0273 protein MJ1359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GFGGP 9
GFGGP
Sbjct: 178 GFGGP 182


>sp|Y1422_METBF|MEMO1 family protein Mbar_A1422|Methanosarcina barkeri (strain Fusaro /

Query: 3 NTGFGGPV 10
+TG+G PV
Sbjct: 73 HTGYGSPV 80


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ANTGFGGPV 10
ANT +GG V
Sbjct: 218 ANTQYGGNV 226


>sp|Y2394_METBU|MEMO1 family protein Mbur_2394|Methanococcoides burtonii (strain DSM

Query: 3 NTGFGGPV 10
+TG+G PV
Sbjct: 73 HTGYGSPV 80


>sp|Y601_METAC|MEMO1 family protein MA_0601|Methanosarcina acetivorans (strain ATCC

Query: 3 NTGFGGPV 10
+TG+G PV
Sbjct: 75 HTGYGSPV 82


>sp|Y1505_AERPE|UPF0273 protein APE_1505.1|Aeropyrum pernix (strain ATCC 700893

Query: 5 GFGGP 9
GFGGP
Sbjct: 178 GFGGP 182


>sp|Y284_PYRHO|UPF0273 protein PH0284|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 GFGGP 9
GFGGP
Sbjct: 178 GFGGP 182


>sp|Y3143_PYRAE|UPF0273 protein PAE3143|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 GFGGP 9
GFGGP
Sbjct: 179 GFGGP 183




29|Sequence|141|150|FGGPVISSLY

>sp|XACC_HALVD|PENTONOLACTONASE XacC|Haloferax volcanii (strain ATCC 29605

Query: 1 FGGPVISSLY 10
FGGP + SLY
Sbjct: 236 FGGPDLDSLY 245


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 FGGPVISSLY 10
FGGP+I +++
Sbjct: 953 FGGPIIGAIH 962


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 1 FGGPVISSLY 10
FGGP+I ++
Sbjct: 499 FGGPIIGGIH 508


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 FGGPVISSLY 10
FGGP+I ++
Sbjct: 486 FGGPIIGGIH 495


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 1 FGGPVISSLY 10
+GGP+I +++
Sbjct: 501 YGGPIIGAIH 510


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GGPVISS 8
GGP++SS
Sbjct: 80 GGPIVSS 86


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 GPVISSLY 10
GPV+ SLY
Sbjct: 41 GPVMRSLY 48


>sp|CSG_METVS|S-LAYER protein|Methanococcus vannielii (strain ATCC 35089

Query: 2 GGPVISSL 9
GGPV+++L
Sbjct: 506 GGPVVNTL 513


>sp|CSG_METTL|S-LAYER protein|Methanothermococcus thermolithotrophicus

Query: 2 GGPVISSL 9
GGPV+++L
Sbjct: 498 GGPVVNAL 505


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 1 FGGPVISSLY 10
FGGP S+Y
Sbjct: 392 FGGPSPDSVY 401


>sp|Y1120_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1120|Methanocaldococcus

Query: 1 FGGPVISS 8
FG P+I+S
Sbjct: 108 FGNPIITS 115


>sp|Y453_METAC|UNCHARACTERIZED glycosyltransferase MA_0453|Methanosarcina acetivorans (strain ATCC

Query: 1 FGGPVISSLY 10
F GP+I S Y
Sbjct: 188 FSGPLIRSRY 197


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 1 FGGPVISSL 9
+GGP+I+ +
Sbjct: 496 YGGPLIAGI 504


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 1 FGGPVISS 8
+GGP+I +
Sbjct: 491 YGGPIIGA 498


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 1 FGGPVISS 8
+GGP+I +
Sbjct: 491 YGGPIIGA 498


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GGPVISSL 9
G P++SSL
Sbjct: 283 GNPILSSL 290


>sp|Y729_METJA|CBS domain-containing protein MJ0729|Methanocaldococcus jannaschii

Query: 2 GGPVISSLY 10
GG V+ +LY
Sbjct: 23 GGEVVQTLY 31


>sp|NADK_METBF|NAD kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GGPVIS 7
GGP+IS
Sbjct: 184 GGPIIS 189




30|Sequence|146|155|ISSLYHEETI

>sp|VOLA_HALVD|VOLACTIN volcanii (strain ATCC 29605

Query: 1 ISSLYHEETI 10
+S+LYH++T+
Sbjct: 127 LSTLYHDKTL 136


>sp|PRIS_METAR|DNA primase small subunit PriS|Methanocella arvoryzae (strain DSM

Query: 4 LYHEETI 10
++HEET+
Sbjct: 36 IFHEETV 42


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 5 YHEET 9
YHEET
Sbjct: 74 YHEET 78




31|Sequence|151|160|HEETIREEDK

>sp|GLYA_METHJ|SERINE hydroxymethyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 2 EETIREEDK 10
+ETIREE K
Sbjct: 393 QETIREEVK 401


>sp|PGK_METTH|PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 HEETIRE 7
H ETIRE
Sbjct: 49 HAETIRE 55


>sp|HPCAS_METS5|3-HYDROXYPROPIONYL-COENZYME A synthetase|Metallosphaera sedula (strain ATCC 51363

Query: 2 EETIREED 9
+ET+R+ED
Sbjct: 61 KETMRQED 68


>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HEETIRE 7
H ETIRE
Sbjct: 48 HAETIRE 54


>sp|RPO13_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo13|Sulfolobus acidocaldarius (strain

Query: 1 HEETIREED 9
HEE REED
Sbjct: 21 HEEISREED 29


>sp|PGK_METS5|PHOSPHOGLYCERATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 HEETIRE 7
H ETIRE
Sbjct: 42 HVETIRE 48


>sp|SRP54_METBU|SIGNAL recognition particle 54 kDa|Methanococcoides burtonii (strain DSM

Query: 2 EETIREED 9
EET+ EED
Sbjct: 302 EETLSEED 309




32|Sequence|156|165|REEDKNIFDY

>sp|MTRH_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanopyrus kandleri (strain AV19

Query: 1 REEDKNIFD 9
++EDK IFD
Sbjct: 43 KDEDKGIFD 51


>sp|MTRH_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina mazei (strain ATCC

Query: 2 EEDKNIFD 9
+EDK IFD
Sbjct: 43 DEDKGIFD 50


>sp|MTRH_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina acetivorans (strain

Query: 2 EEDKNIFD 9
+EDK IFD
Sbjct: 43 DEDKGIFD 50


>sp|MTRH_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina barkeri (strain

Query: 2 EEDKNIFD 9
+EDK IFD
Sbjct: 43 DEDKGIFD 50


>sp|SYT_METST|THREONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 EEDKNIFD 9
EED NIFD
Sbjct: 163 EEDGNIFD 170


>sp|AMPD_METMA|ANHYDROMEVALONATE phosphate decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EEDKNIFD 9
+ED NIFD
Sbjct: 351 DEDINIFD 358


>sp|ARLY_ARCFU|ARGININOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EEDKNIFDY 10
E DKNIF Y
Sbjct: 23 EHDKNIFLY 31


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 REEDKNIFDY 10
+EE KNI Y
Sbjct: 345 KEEPKNIIKY 354


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 EEDKNIFDY 10
+EDK +F++
Sbjct: 169 QEDKKVFEF 177


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 EDKNIFD 9
ED+NIFD
Sbjct: 301 EDQNIFD 307


>sp|COMD_METJA|SULFOPYRUVATE decarboxylase subunit alpha|Methanocaldococcus jannaschii (strain

Query: 2 EEDKNIFD 9
EEDKNI +
Sbjct: 35 EEDKNIIN 42


>sp|DCDB_METM5|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C5 /

Query: 3 EDKNIFDY 10
DK+IFDY
Sbjct: 4 SDKDIFDY 11


>sp|DCDB_METM7|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C7 /

Query: 3 EDKNIFDY 10
DK+IFDY
Sbjct: 4 SDKDIFDY 11


>sp|DCDB_METM6|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C6 /

Query: 3 EDKNIFDY 10
DK+IFDY
Sbjct: 4 SDKDIFDY 11


>sp|RFCL_META3|REPLICATION factor C large subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 REEDKNIFD 9
R+ DK+IFD
Sbjct: 221 RDTDKSIFD 229


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 EDKNIFD 9
EDKN+F+
Sbjct: 515 EDKNVFN 521


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 EEDKNIFDY 10
EEDK DY
Sbjct: 340 EEDKEALDY 348




33|Sequence|161|170|NIFDYCRENN

>sp|EF2_METBU|ELONGATION factor 2|Methanococcoides burtonii (strain DSM 6242

Query: 2 IFDYCRENN 10
+F+YCRE +
Sbjct: 226 VFNYCREED 234


>sp|Y887_METTH|UPF0104 membrane protein MTH_887|Methanothermobacter thermautotrophicus

Query: 1 NIFDYCREN 9
++FDY REN
Sbjct: 8 SVFDYIREN 16


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 NIFDYCREN 9
NI DY REN
Sbjct: 310 NILDYHREN 318


>sp|EF2_METMT|ELONGATION factor 2|Methanococcoides methylutens

Query: 2 IFDYCRENN 10
+FDYCR +
Sbjct: 226 VFDYCRAED 234


>sp|SELD_METMP|SELENIDE, water dikinase|Methanococcus maripaludis (strain DSM 14266

Query: 4 DYCRENN 10
D+CREN+
Sbjct: 114 DFCREND 120


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 1 NIFDYCRENN 10
N++DYC+ +
Sbjct: 225 NVYDYCKAED 234


>sp|IF2A_METST|TRANSLATION initiation factor 2 subunit|Methanosphaera stadtmanae (strain

Query: 1 NIFDYCREN 9
NI DY REN
Sbjct: 53 NIRDYVREN 61


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 NIFDYCRENN 10
+I+ YC E+N
Sbjct: 225 DIYKYCTEDN 234


>sp|SELD_METJA|SELENIDE, water dikinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DYCREN 9
D+CREN
Sbjct: 128 DFCREN 133


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 DYCRENN 10
+YCRE+N
Sbjct: 378 EYCREHN 384


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 1 NIFDYCRENN 10
+I DYC + N
Sbjct: 225 DIIDYCEQEN 234


>sp|EF2_METTP|ELONGATION factor 2|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 IFDYCREN 9
++DYCR +
Sbjct: 226 VYDYCRSD 233


>sp|PYRB_STAMF|ASPARTATE carbamoyltransferase catalytic subunit|Staphylothermus marinus

Query: 1 NIFDYCREN 9
+I DY REN
Sbjct: 10 SILDYSREN 18


>sp|EF2_METST|ELONGATION factor 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NIFDYCRENN 10
+I YC E+N
Sbjct: 225 DIIQYCNEDN 234


>sp|SYD_PYRAB|ASPARTATE--TRNA(ASP) ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 IFDYCRENN 10
+ +Y RENN
Sbjct: 254 VINYVRENN 262


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 IFDYCRENN 10
I DY ENN
Sbjct: 257 IMDYMEENN 265


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 IFDYCRENN 10
I DY ENN
Sbjct: 257 IMDYMEENN 265


>sp|XDH2_HALVD|D-XYLOSE 1-dehydrogenase (NADP(+)) 2|Haloferax volcanii (strain ATCC 29605

Query: 2 IFDYCRE 8
+FDYC +
Sbjct: 105 VFDYCED 111


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 IFDYCREN 9
+ D+CRE+
Sbjct: 387 VLDHCRED 394


>sp|EF2_METRM|ELONGATION factor 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 NIFDYCRE 8
+I DYC E
Sbjct: 225 DIIDYCNE 232


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IFDYCRENN 10
I+D+C+ N
Sbjct: 321 IYDFCQSGN 329


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 2 IFDYCRE 8
+FD CRE
Sbjct: 396 MFDRCRE 402


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 2 IFDYCRE 8
I DYC E
Sbjct: 168 ILDYCEE 174


>sp|MTAC_METBF|METHANOL--CORRINOID protein|Methanosarcina barkeri (strain Fusaro /

Query: 4 DYCRENN 10
+YC+EN+
Sbjct: 110 EYCKENS 116


>sp|MOAA_META3|PROBABLE GTP 3',8-cyclase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NIFDYCRE 8
+I DYCR+
Sbjct: 169 DIMDYCRK 176


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 NIFDYCR 7
+++DYC+
Sbjct: 225 DVYDYCK 231


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NIFDYCR 7
+++DYC+
Sbjct: 225 DVYDYCK 231


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 3 FDYCR 7
+DYCR
Sbjct: 576 YDYCR 580


>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 3 FDYCR 7
+DYCR
Sbjct: 593 YDYCR 597


>sp|HBCL2_METS5|4-HYDROXYBUTYRATE--COA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 NIFDYCRENN 10
N+ DY + NN
Sbjct: 288 NLADYMKRNN 297


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 NIFDYCREN 9
NI DY EN
Sbjct: 253 NIADYIEEN 261


>sp|MOAA_METTH|PROBABLE GTP 3',8-cyclase|Methanothermobacter thermautotrophicus (strain

Query: 1 NIFDYCRENN 10
++F++CRE
Sbjct: 169 DMFEFCREKG 178


>sp|KAE1_THESM|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus sibiricus

Query: 3 FDYCREN 9
+D CR+N
Sbjct: 280 YDLCRDN 286


>sp|KAE1_THEON|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus onnurineus

Query: 3 FDYCREN 9
+D CR+N
Sbjct: 280 YDLCRDN 286


>sp|KAE1_THEKO|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus kodakarensis

Query: 3 FDYCREN 9
+D CR+N
Sbjct: 280 YDLCRDN 286


>sp|KAE1_THEGJ|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus

Query: 3 FDYCREN 9
+D CR+N
Sbjct: 280 YDLCRDN 286


>sp|KAE1_PYRHO|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus horikoshii

Query: 3 FDYCREN 9
+D CR+N
Sbjct: 280 YDLCRDN 286


>sp|KAE1_PYRFU|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus furiosus

Query: 3 FDYCREN 9
+D CR+N
Sbjct: 280 YDLCRDN 286


>sp|KAE1_PYRAB|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus abyssi (strain

Query: 3 FDYCREN 9
+D CR+N
Sbjct: 280 YDLCRDN 286


>sp|MOAA_METM6|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C6 /

Query: 2 IFDYCRE 8
I DYCR+
Sbjct: 168 IMDYCRK 174


>sp|RGYRB_NANEQ|REVERSE gyrse subunit B|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 IFDYCRENN 10
+++Y +ENN
Sbjct: 41 VYEYLKENN 49


>sp|MOAA_METMP|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain DSM 14266

Query: 2 IFDYCRE 8
I DYCR+
Sbjct: 168 IMDYCRK 174


>sp|PYRG_META3|CTP synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NIFDYCRENN 10
N Y RENN
Sbjct: 370 NASKYARENN 379


>sp|MOAA_METM5|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C5 /

Query: 2 IFDYCRE 8
I DYCR+
Sbjct: 168 IMDYCRK 174


>sp|MOAA_METM7|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C7 /

Query: 2 IFDYCRE 8
I DYCR+
Sbjct: 168 IMDYCRK 174


>sp|EF2_METS3|ELONGATION factor 2|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 NIFDYCREN 9
+I DYC ++
Sbjct: 225 DIIDYCNDD 233


>sp|HIS5_NATPD|IMIDAZOLE glycerol phosphate synthase subunit|Natronomonas pharaonis (strain

Query: 1 NIFDYCRE 8
N DYC E
Sbjct: 207 NFVDYCLE 214


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 2 IFDYCRENN 10
I DYC++ +
Sbjct: 424 IHDYCKDRD 432


>sp|Y1227_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 1 NIFDYCRENN 10
I D C++NN
Sbjct: 148 KIIDLCKKNN 157


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 IFDYCRENN 10
+ DY ENN
Sbjct: 258 MMDYMEENN 266


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 4 DYCREN 9
+YCR+N
Sbjct: 293 EYCRKN 298


>sp|GATD_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C5 /

Query: 4 DYCRENN 10
DY ENN
Sbjct: 335 DYANENN 341


>sp|GATD_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C6 /

Query: 4 DYCRENN 10
DY ENN
Sbjct: 335 DYANENN 341


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 IFDYCRENN 10
I DY +NN
Sbjct: 257 IMDYMEDNN 265


>sp|GATD_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain DSM

Query: 4 DYCRENN 10
DY ENN
Sbjct: 335 DYANENN 341


>sp|GATD_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C7 /

Query: 4 DYCRENN 10
DY ENN
Sbjct: 335 DYANENN 341




34|Sequence|166|175|CRENNIDHIT

>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 CRENNIDHI 9
CRE N DH+
Sbjct: 96 CREFNPDHV 104


>sp|PRIS_THEAC|DNA primase small subunit PriS|Thermoplasma acidophilum (strain ATCC

Query: 2 RENNID 7
RENNID
Sbjct: 10 RENNID 15


>sp|COFC_META3|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 CRENNIDHI 9
C+ENNI+ I
Sbjct: 158 CKENNINPI 166


>sp|YNI2_METTL|UNCHARACTERIZED protein in nifH2 3'region|Methanothermococcus

Query: 1 CRENNIDHIT 10
CR NID T
Sbjct: 38 CRSENIDGYT 47


>sp|Y1170_METST|PUTATIVE nickel insertion protein|Methanosphaera stadtmanae (strain ATCC

Query: 1 CRENNIDHIT 10
CR N+ HIT
Sbjct: 306 CRNNDAQHIT 315


>sp|Y1464_METJA|UNCHARACTERIZED GTP-binding protein MJ1464|Methanocaldococcus jannaschii (strain

Query: 1 CRENNID 7
CRE NI+
Sbjct: 343 CRERNIE 349


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 3 ENNIDH 8
ENN DH
Sbjct: 199 ENNFDH 204


>sp|Y1109_METTH|PUTATIVE nickel insertion protein|Methanothermobacter thermautotrophicus

Query: 3 ENNIDHIT 10
E N+DH++
Sbjct: 255 ETNVDHLS 262


>sp|TRMI_PYRAB|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 3 ENNIDHI 9
E N+DH+
Sbjct: 160 EENVDHV 166


>sp|GCSPA_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 ENNIDHI 9
E+NI+HI
Sbjct: 225 ESNIEHI 231


>sp|GCH3_NATPD|GTP cyclohydrolase III|Natronomonas pharaonis (strain ATCC 35678

Query: 1 CRENNID 7
CRE N D
Sbjct: 242 CREENTD 248


>sp|RL14E_AERPE|LARGE ribosomal subunit protein eL14|Aeropyrum pernix (strain ATCC

Query: 2 RENNIDHI 9
R NIDHI
Sbjct: 48 RRVNIDHI 55


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 2 RENNIDH 8
+ NN+DH
Sbjct: 122 KTNNVDH 128




35|Sequence|171|180|IDHITKAIKS

>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 IDHITKAIKS 10
I+H+ KA+KS
Sbjct: 402 INHVEKALKS 411


>sp|RADB_THEVO|DNA repair and recombination protein|Thermoplasma volcanium (strain

Query: 1 IDHITKAI 8
+DHI KAI
Sbjct: 183 VDHIMKAI 190


>sp|PYRG_AERPE|CTP synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IDHITKAIKS 10
I HIT IKS
Sbjct: 117 IPHITDEIKS 126


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 IDHITKAIKS 10
I HIT IKS
Sbjct: 114 IPHITDEIKS 123


>sp|PYRG_METTH|CTP synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IDHITKAIKS 10
I HIT IKS
Sbjct: 118 IPHITDEIKS 127


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IDHITKAIKS 10
I HIT IKS
Sbjct: 114 IPHITNEIKS 123


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IDHITKAIKS 10
I H+T IKS
Sbjct: 114 IPHVTNEIKS 123


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IDHITKAIKS 10
I H+T IKS
Sbjct: 114 IPHVTDEIKS 123


>sp|FEN_SACS2|FLAP endonuclease 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IDHITKAIK 9
I+ +TKAIK
Sbjct: 326 IERLTKAIK 334




36|Sequence|176|185|KAIKSKNVDV

>sp|Y1265_ARCFU|UPF0173 metal-dependent hydrolase AF_1265|Archaeoglobus fulgidus (strain

Query: 1 KAIKSKNVDV 10
KA+K+K +DV
Sbjct: 207 KAVKAKGLDV 216


>sp|GFCR_METJA|TRANSCRIPTIONAL regulator GfcR|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KAIKSKNVDV 10
KAIK +NVD+
Sbjct: 53 KAIKLENVDI 62


>sp|FLPA_SULAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Sulfolobus acidocaldarius (strain

Query: 2 AIKSKNVDV 10
AIKS+++DV
Sbjct: 180 AIKSRSIDV 188


>sp|KPRS_METMA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IKSKNVDV 10
IK+KN+DV
Sbjct: 204 IKTKNLDV 211


>sp|FLPA_METKA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanopyrus kandleri (strain AV19

Query: 2 AIKSKNVDV 10
AIK++++DV
Sbjct: 180 AIKARSIDV 188


>sp|THIOL_METTL|ACETYL-COA acetyltransferase|Methanothermococcus thermolithotrophicus

Query: 1 KAIKSKNVD 9
KAIK NVD
Sbjct: 32 KAIKDANVD 40


>sp|FLPA_AERPE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Aeropyrum pernix (strain ATCC

Query: 2 AIKSKNVDV 10
AIK++++DV
Sbjct: 181 AIKARSIDV 189


>sp|MTM7_METJA|PUTATIVE type II methyltransferase M.MjaORF1200P|Methanocaldococcus

Query: 1 KAIKSKNVDV 10
K IK+K VDV
Sbjct: 117 KFIKNKKVDV 126


>sp|KPRS_METAC|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 IKSKNVDV 10
IK+KN+DV
Sbjct: 192 IKTKNLDV 199


>sp|DNAK_THEVO|CHAPERONE protein DnaK|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KAIKSKNVD 9
KAI+ KN+D
Sbjct: 551 KAIEEKNMD 559


>sp|FLPA_PYRAB|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 AIKSKNVDV 10
A+KS+++DV
Sbjct: 177 AVKSRSIDV 185


>sp|FLPA_STAMF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Staphylothermus marinus (strain

Query: 2 AIKSKNVDV 10
AIK++++DV
Sbjct: 181 AIKARSIDV 189


>sp|DTDA_METJA|D-AMINOACYL-TRNA deacylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AIKSKNVD 9
A+KSKN D
Sbjct: 164 AMKSKNYD 171


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 2 AIKSKNVDV 10
A+KSKN+D+
Sbjct: 305 ALKSKNLDL 313




37|Sequence|181|190|KNVDVNVKDE

>sp|HIS7_PYRFU|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NVDVNVKD 9
NVDVN+KD
Sbjct: 102 NVDVNIKD 109


>sp|PYRG_HALMA|CTP synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 KNVDVNVK 8
KNVDVNV+
Sbjct: 331 KNVDVNVR 338


>sp|Y1577_METJA|UNCHARACTERIZED protein MJ1577|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KNVDVNVKDE 10
KNV +NV DE
Sbjct: 185 KNVKINVIDE 194


>sp|Y1861_PYRAE|PUTATIVE ankyrin repeat protein PAE1861|Pyrobaculum aerophilum (strain ATCC

Query: 4 DVNVKD 9
DVNVKD
Sbjct: 181 DVNVKD 186


>sp|PYRG_HALHT|CTP synthase|Haloarcula hispanica (strain ATCC 33960

Query: 1 KNVDVNVK 8
KNVDVNV+
Sbjct: 331 KNVDVNVQ 338


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 1 KNVDVNVKD 9
KN+D+N D
Sbjct: 20 KNIDINFSD 28


>sp|GSA_PICTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Picrophilus torridus (strain ATCC 700027

Query: 1 KNVDVNV 7
KN+DVN+
Sbjct: 337 KNIDVNI 343


>sp|RL22_SULAC|LARGE ribosomal subunit protein uL22|Sulfolobus acidocaldarius (strain

Query: 1 KNVDVNVKD 9
KN+D +V+D
Sbjct: 22 KNIDASVRD 30


>sp|ARLY_ARCFU|ARGININOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VDVNVKDE 10
V++NV+DE
Sbjct: 405 VEINVRDE 412




38|Sequence|186|195|NVKDEEGRAL

>sp|Y2330_ARCFU|UNCHARACTERIZED protein AF_2330|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KDEEGRA 9
KDEEGRA
Sbjct: 28 KDEEGRA 34


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 VKDEEGRAL 10
+KDEEG+ L
Sbjct: 549 IKDEEGKTL 557


>sp|VHUU_METMP|F420-NON-REDUCING hydrogenase vhu subunit U|Methanococcus maripaludis (strain DSM

Query: 2 VKDEEGRAL 10
VKDE+G+ L
Sbjct: 29 VKDEQGKVL 37


>sp|SYDND_METBU|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 VKDEEGRA 9
V+D EGRA
Sbjct: 44 VRDREGRA 51


>sp|SYS2_METKA|TYPE-2 serine--tRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 NVKDEEGRAL 10
NVK++ GR L
Sbjct: 465 NVKEKSGRTL 474


>sp|FAU1_CALMQ|PROBABLE ribonuclease FAU-1|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 VKDEEGRAL 10
++DE GRAL
Sbjct: 289 MRDELGRAL 297


>sp|NADE_METMA|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VKDEEGRA 9
++DE GRA
Sbjct: 14 IRDETGRA 21


>sp|KDPQ_HALS3|PROBABLE Kdp system regulatory protein|Halobacterium salinarum (strain ATCC

Query: 4 DEEGRAL 10
DEEGR L
Sbjct: 184 DEEGRGL 190


>sp|RIBB_METAC|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 DEEGRAL 10
DE GRAL
Sbjct: 207 DESGRAL 213




39|Sequence|191|200|EGRALLHWAC

>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 1 EGRALLHW 8
+GR LHW
Sbjct: 570 QGRVRLHW 577


>sp|Y1620_METJA|UNCHARACTERIZED protein MJ1620|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGRALLHWAC 10
EGR L W C
Sbjct: 494 EGRILKTWLC 503


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EGRALLHW 8
+GR LHW
Sbjct: 524 QGRIKLHW 531


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EGRALLHW 8
+GR LHW
Sbjct: 136 KGRVRLHW 143


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EGRALLHWA 9
EG ++HWA
Sbjct: 510 EGVDVIHWA 518


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 6 LHWAC 10
LHW C
Sbjct: 521 LHWPC 525


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EGRALLHW 8
EGR +L W
Sbjct: 331 EGRVVLKW 338


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 2 GRALLHW 8
GR L HW
Sbjct: 100 GRHLYHW 106


>sp|CAS6L_PYRHO|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6nc|Pyrococcus

Query: 1 EGRALLHW 8
EG L HW
Sbjct: 140 EGNKLRHW 147


>sp|SAHH_AERPE|ADENOSYLHOMOCYSTEINASE pernix (strain ATCC 700893

Query: 1 EGRALLHWA 9
EGR + WA
Sbjct: 15 EGRMQIEWA 23




40|Sequence|196|205|LHWACDRGHK

>sp|SYFB_METLZ|PHENYLALANINE--TRNA ligase beta subunit|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LHWACDRGHK 10
LHWA RG K
Sbjct: 122 LHWAVGRGRK 131


>sp|SYFB_METPE|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaerula palustris (strain ATCC

Query: 1 LHWACDRGHK 10
LHWA RG K
Sbjct: 122 LHWAIGRGRK 131


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 WACDRGH 9
W CD GH
Sbjct: 446 WYCDNGH 452


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LHWACDRG 8
LHWA RG
Sbjct: 122 LHWAVGRG 129


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 1 LHWACDRG 8
LHWA RG
Sbjct: 122 LHWAVGRG 129


>sp|DAPF_METKA|DIAMINOPIMELATE epimerase|Methanopyrus kandleri (strain AV19 /

Query: 3 WACDR 7
WACDR
Sbjct: 35 WACDR 39


>sp|RL15E_HALSA|LARGE ribosomal subunit protein eL15|Halobacterium salinarum (strain ATCC

Query: 1 LHWACDRGHK 10
L+W CD HK
Sbjct: 148 LNWICDDSHK 157


>sp|RL15E_HALS3|LARGE ribosomal subunit protein eL15|Halobacterium salinarum (strain ATCC

Query: 1 LHWACDRGHK 10
L+W CD HK
Sbjct: 148 LNWICDDSHK 157


>sp|RL13_THEKO|LARGE ribosomal subunit protein uL13|Thermococcus kodakarensis (strain

Query: 1 LHWACDRGHK 10
L W DRG K
Sbjct: 83 LPWKTDRGRK 92


>sp|RL13_PYRHO|LARGE ribosomal subunit protein uL13|Pyrococcus horikoshii (strain ATCC

Query: 1 LHWACDRGHK 10
L W DRG K
Sbjct: 83 LPWKTDRGRK 92


>sp|RL13_PYRFU|LARGE ribosomal subunit protein uL13|Pyrococcus furiosus (strain ATCC

Query: 1 LHWACDRGHK 10
L W DRG K
Sbjct: 83 LPWKTDRGRK 92


>sp|RL13_PYRAB|LARGE ribosomal subunit protein uL13|Pyrococcus abyssi (strain GE5 /

Query: 1 LHWACDRGHK 10
L W DRG K
Sbjct: 83 LPWKTDRGRK 92


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 WACDRGH 9
W C+ GH
Sbjct: 454 WYCENGH 460


>sp|MFNA_PYRFU|PROBABLE L-aspartate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HWACDRGH 9
H +CD GH
Sbjct: 363 HASCDGGH 370


>sp|URE3_NATPD|UREASE subunit gamma|Natronomonas pharaonis (strain ATCC 35678

Query: 3 WACDRGHK 10
WAC+R +
Sbjct: 42 WACERARE 49


>sp|SYFB_METHJ|PHENYLALANINE--TRNA ligase beta subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LHWACDRG 8
LHW RG
Sbjct: 122 LHWVVGRG 129


>sp|RL15E_HALWD|LARGE ribosomal subunit protein eL15|Haloquadratum walsbyi (strain DSM

Query: 1 LHWACDRGHK 10
L+W CD HK
Sbjct: 148 LNWICDDTHK 157


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 2 HWACDR 7
H+ACD+
Sbjct: 381 HYACDK 386


>sp|SYR_METMA|ARGININE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 WACDR 7
WAC+R
Sbjct: 172 WACER 176


>sp|SYR_METBF|ARGININE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 WACDR 7
WAC+R
Sbjct: 172 WACER 176


>sp|SYR_METAC|ARGININE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 WACDR 7
WAC+R
Sbjct: 170 WACER 174


>sp|DNLI_METST|DNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 WACDRGHK 10
W+ D GH+
Sbjct: 395 WSIDEGHE 402


>sp|RNP3_AERPE|RIBONUCLEASE P protein component 3|Aeropyrum pernix (strain ATCC 700893

Query: 3 WACDRG 8
WA DRG
Sbjct: 109 WAADRG 114


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 WACDRGH 9
W C GH
Sbjct: 462 WRCKNGH 468


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 WACDRGH 9
W C GH
Sbjct: 411 WVCKNGH 417


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WACDRGH 9
W C GH
Sbjct: 411 WVCKNGH 417


>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 4 ACDRG 8
ACDRG
Sbjct: 366 ACDRG 370


>sp|NUCS1_HALSA|ENDONUCLEASE NucS 1|Halobacterium salinarum (strain ATCC 700922

Query: 4 ACDRGH 9
ACD GH
Sbjct: 90 ACDGGH 95


>sp|QUEC_METBF|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 WACDRGHK 10
W+C RG +
Sbjct: 193 WSCYRGEE 200


>sp|QUEC_PICTO|7-CYANO-7-DEAZAGUANINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 LHWACDRGHK 10
L W+C G K
Sbjct: 184 LTWSCYNGRK 193


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 WACDRG 8
W CD G
Sbjct: 411 WVCDNG 416


>sp|ISF1_METJA|IRON-SULFUR flavoprotein MJ0731|Methanocaldococcus jannaschii (strain ATCC

Query: 3 WACDRGHK 10
W+ DRG K
Sbjct: 162 WSKDRGKK 169


>sp|GATB_AERPE|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 2 HWACDRG 8
HW +RG
Sbjct: 256 HWDAERG 262


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WACDRGH 9
W C GH
Sbjct: 411 WICKNGH 417


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 2 HWACDRG 8
HW +RG
Sbjct: 751 HWVYERG 757


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LHWACDRGH 9
+++ CD GH
Sbjct: 188 IYYECDCGH 196


>sp|HLY_HALMT|HALOLYSIN mediterranei (strain ATCC 33500

Query: 1 LHWACDRG 8
+ WA D+G
Sbjct: 240 IEWAADQG 247


>sp|TRPB_THEVO|TRYPTOPHAN synthase beta chain|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LHWACDRGHK 10
+H+A D G K
Sbjct: 210 IHYALDNGGK 219


>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LHWACDRGHK 10
+H+A D G K
Sbjct: 210 IHYALDNGGK 219


>sp|NADA_HALSA|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LHWACDRGHK 10
WA +RG K
Sbjct: 176 FEWAFERGDK 185


>sp|NADA_HALS3|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LHWACDRGHK 10
WA +RG K
Sbjct: 176 FEWAFERGDK 185




41|Sequence|201|210|DRGHKELVTV

>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 2 RGHKELV 8
RGH+ELV
Sbjct: 318 RGHRELV 324


>sp|COAD_METJA|PHOSPHOPANTETHEINE adenylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 RGHKELV 8
RGHKEL+
Sbjct: 14 RGHKELL 20


>sp|AATB_METBA|A-TYPE ATP synthase subunit B|Methanosarcina barkeri

Query: 3 GHKELVTV 10
G+KE+VT+
Sbjct: 25 GYKEIVTI 32


>sp|AATB_METBF|A-TYPE ATP synthase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 3 GHKELVTV 10
G+KE+VT+
Sbjct: 25 GYKEIVTI 32




42|Sequence|206|215|ELVTVLLQHR

>sp|LYSY_PYRIL|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 ELVTVLLQHR 10
EL+ +LLQHR
Sbjct: 16 ELLRILLQHR 25


>sp|LYSY_PYRCJ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 ELVTVLLQH 9
EL+ +LLQH
Sbjct: 16 ELLRILLQH 24


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 ELVTVLLQH 9
EL+ +LLQH
Sbjct: 15 ELLRILLQH 23




43|Sequence|211|220|LLQHRADINC

>sp|CDC67_HALSA|ORC1-TYPE DNA replication protein 7|Halobacterium salinarum (strain ATCC

Query: 1 LLQHRADI 8
+LQHR+D+
Sbjct: 326 ILQHRSDV 333


>sp|PGK_METJA|PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 RADINC 10
R DINC
Sbjct: 20 RVDINC 25


>sp|HYD2G_PYRFU|SULFHYDROGENASE 2 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LLQHRADINC 10
LL+H +NC
Sbjct: 160 LLKHGEKLNC 169




44|Sequence|216|225|ADINCQDNEG

>sp|Y045_METMA|PUTATIVE ankyrin repeat protein MM_0045|Methanosarcina mazei (strain ATCC

Query: 1 ADINCQDNEG 10
AD+N QDN G
Sbjct: 224 ADLNIQDNSG 233


Query: 1 ADINCQDNEG 10
AD+N QD G
Sbjct: 257 ADLNLQDKNG 266


Query: 1 ADINCQDNEG 10
AD+N QD G
Sbjct: 158 ADLNFQDENG 167


>sp|RL14_THEAC|LARGE ribosomal subunit protein uL14|Thermoplasma acidophilum (strain

Query: 1 ADINCQDNEG 10
A+I C DN G
Sbjct: 16 ANITCADNTG 25


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DINCQD 7
DINC+D
Sbjct: 675 DINCKD 680


>sp|RL14_NITMS|LARGE ribosomal subunit protein uL14|Nitrosopumilus maritimus (strain

Query: 1 ADINCQDNEG 10
A+I C DN G
Sbjct: 24 ANIVCADNSG 33


>sp|RL14_THEVO|LARGE ribosomal subunit protein uL14|Thermoplasma volcanium (strain

Query: 1 ADINCQDNEG 10
A+I C DN G
Sbjct: 16 ANIVCADNTG 25


>sp|TOP6A_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DINCQDNEG 10
+I+CQD+ G
Sbjct: 158 EIHCQDDVG 166


>sp|SRP19_NATPD|SIGNAL recognition particle 19 kDa|Natronomonas pharaonis (strain ATCC

Query: 2 DINCQDNEG 10
D NC NEG
Sbjct: 12 DANCTRNEG 20


>sp|RL14_METBU|LARGE ribosomal subunit protein uL14|Methanococcoides burtonii (strain

Query: 1 ADINCQDNEG 10
A I C DN G
Sbjct: 16 AKIECVDNTG 25


>sp|RL14_CENSY|LARGE ribosomal subunit protein uL14|Cenarchaeum symbiosum (strain A)

Query: 1 ADINCQDNEG 10
A + C DN G
Sbjct: 28 ARVTCADNSG 37


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 1 ADINCQD 7
ADI C+D
Sbjct: 102 ADITCRD 108


>sp|TIAS_METKA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanopyrus kandleri (strain

Query: 3 INCQDNEG 10
+ C+D EG
Sbjct: 288 VRCEDEEG 295


>sp|F16PA_METB6|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanoregula boonei (strain DSM 21154

Query: 3 INCQDNEG 10
I+C +NEG
Sbjct: 198 ISCLENEG 205


>sp|Y933_METJA|UNCHARACTERIZED membrane protein MJ0933|Methanocaldococcus jannaschii (strain

Query: 5 CQDNEG 10
C DNEG
Sbjct: 31 CLDNEG 36


>sp|RL14_METAC|LARGE ribosomal subunit protein uL14|Methanosarcina acetivorans (strain

Query: 1 ADINCQDNEG 10
A I C DN G
Sbjct: 16 AQIACVDNTG 25


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 3 INCQDNE 9
INC DN+
Sbjct: 4 INCSDND 10


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 ADINCQDN 8
ADINC N
Sbjct: 970 ADINCWYN 977


>sp|RL14_METMA|LARGE ribosomal subunit protein uL14|Methanosarcina mazei (strain ATCC

Query: 1 ADINCQDNEG 10
A I C DN G
Sbjct: 16 AQIACVDNTG 25




45|Sequence|221|230|QDNEGQTALH

>sp|Y045_METMA|PUTATIVE ankyrin repeat protein MM_0045|Methanosarcina mazei (strain ATCC

Query: 1 QDNEGQTAL 9
QDN G+TAL
Sbjct: 229 QDNSGKTAL 237


Query: 1 QDNEGQTALH 10
QD G+TAL
Sbjct: 163 QDENGETALK 172


Query: 1 QDNEGQTAL 9
QD G+TAL
Sbjct: 196 QDENGETAL 204


>sp|RS4E_METBF|SMALL ribosomal subunit protein eS4|Methanosarcina barkeri (strain Fusaro

Query: 1 QDNEGQTALH 10
QD +G+ ALH
Sbjct: 98 QDEKGRLALH 107


>sp|Y1861_PYRAE|PUTATIVE ankyrin repeat protein PAE1861|Pyrobaculum aerophilum (strain ATCC

Query: 2 DNEGQTALH 10
DN G+T LH
Sbjct: 216 DNMGRTPLH 224


>sp|HIS4_METPE|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosphaerula palustris

Query: 4 EGQTALH 10
EG TALH
Sbjct: 41 EGATALH 47


>sp|G6PI_HALWD|PROBABLE glucose-6-phosphate isomerase|Haloquadratum walsbyi (strain DSM

Query: 1 QDNEGQTAL 9
+DN GQT +
Sbjct: 275 KDNRGQTPI 283




46|Sequence|226|235|QTALHYASAC

>sp|R1PKT_HALXS|ATP-DEPENDENT ribose-1-phosphate kinase|Halopiger xanaduensis (strain DSM 18323

Query: 1 QTALHYASAC 10
+ AL YA+AC
Sbjct: 259 ERALEYANAC 268


>sp|HELS_THEVO|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma volcanium (strain ATCC 51530

Query: 2 TALHYASAC 10
TAL+Y S C
Sbjct: 499 TALYYISLC 507


>sp|TRPB1_METAC|TRYPTOPHAN synthase beta chain 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QTALHYASAC 10
+ ALH AS C
Sbjct: 273 KAALHSASLC 282


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QTALHYASAC 10
+ ALH AS C
Sbjct: 273 KAALHSASLC 282


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 5 HYASAC 10
HYAS C
Sbjct: 304 HYASDC 309




47|Sequence|231|240|YASACEFLDI

>sp|GLYA_METBF|SERINE hydroxymethyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YASACEFLDI 10
Y C+F+DI
Sbjct: 60 YYGGCDFVDI 69


>sp|GLYA_METAC|SERINE hydroxymethyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 YASACEFLDI 10
Y C+F+DI
Sbjct: 60 YYGGCDFVDI 69


>sp|CDC6_PYRAB|ORC1-TYPE DNA replication protein|Pyrococcus abyssi (strain GE5 /

Query: 1 YASACEFLDI 10
Y CE+LD+
Sbjct: 338 YRELCEYLDL 347


>sp|CDC6_PYRHO|ORC1-TYPE DNA replication protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YASACEFLDI 10
Y CE+LD+
Sbjct: 338 YRDLCEYLDL 347


>sp|GLMS_METMP|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanococcus maripaludis (strain

Query: 1 YASACEFL 8
YA+AC+ L
Sbjct: 567 YATACQLL 574


>sp|GLYA_METMA|SERINE hydroxymethyltransferase|Methanosarcina mazei (strain ATCC

Query: 1 YASACEFLDI 10
Y C+F+D+
Sbjct: 60 YYGGCDFVDV 69


>sp|CDC6_PYRFU|ORC1-TYPE DNA replication protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YASACEFLDI 10
Y CE++D+
Sbjct: 339 YRELCEYIDL 348


>sp|Y505_METJA|UNCHARACTERIZED protein MJ0505|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YASACEFLD 9
Y S EFLD
Sbjct: 233 YGSGLEFLD 241




48|Sequence|236|245|EFLDIVELLL

>sp|MTD_METJA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanocaldococcus

Query: 1 EFLDIVELLL 10
EFLD VE+ L
Sbjct: 126 EFLDPVEMAL 135


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 EFLDIVELLL 10
E L+IVELLL
Sbjct: 625 ERLNIVELLL 634


>sp|MTD_METMA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina mazei

Query: 1 EFLDIVEL 8
EFLD VE+
Sbjct: 125 EFLDSVEM 132


>sp|DHAS_METTH|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EFLDIVEL 8
EFLD++E+
Sbjct: 123 EFLDLIEV 130


>sp|FAU1_THEPD|PROBABLE ribonuclease FAU-1|Thermofilum pendens (strain DSM 2475

Query: 1 EFLDIVE 7
EFLD+VE
Sbjct: 432 EFLDLVE 438


>sp|ARGB_METJA|ACETYLGLUTAMATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EFLDIVELLL 10
E LDIVE++L
Sbjct: 95 ETLDIVEMVL 104




49|Sequence|241|250|VELLLQSGAD

>sp|Y045_METMA|PUTATIVE ankyrin repeat protein MM_0045|Methanosarcina mazei (strain ATCC

Query: 1 VELLLQSGAD 10
VELL+++GAD
Sbjct: 315 VELLIKAGAD 324


Query: 1 VELLLQSGAD 10
VELL+ +GAD
Sbjct: 249 VELLVNAGAD 258


Query: 2 ELLLQSGAD 10
ELL+++GAD
Sbjct: 217 ELLIKAGAD 225


>sp|Y1861_PYRAE|PUTATIVE ankyrin repeat protein PAE1861|Pyrobaculum aerophilum (strain ATCC

Query: 1 VELLLQSGAD 10
VELLL+ G D
Sbjct: 172 VELLLKRGPD 181


Query: 1 VELLLQSGAD 10
++LLL+ GAD
Sbjct: 202 IKLLLRYGAD 211


>sp|TRPA_PYRAB|TRYPTOPHAN synthase alpha chain|Pyrococcus abyssi (strain GE5 /

Query: 1 VELLLQSGAD 10
VE+LL +GA+
Sbjct: 206 VEMLLNAGAN 215


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VELLLQSG 8
+EL LQSG
Sbjct: 58 IELTLQSG 65


>sp|MTAD_HALSA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VELLLQSGA 9
+ELL +SGA
Sbjct: 256 IELLAESGA 264


>sp|BIOB_NITMS|BIOTIN synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 ELLLQSGAD 10
E LLQSGA+
Sbjct: 288 EELLQSGAN 296




50|Sequence|246|255|QSGADPTLRD

>sp|Y1861_PYRAE|PUTATIVE ankyrin repeat protein PAE1861|Pyrobaculum aerophilum (strain

Query: 1 QSGADPTLRD 10
++GADP RD
Sbjct: 56 KAGADPNARD 65


>sp|RPIA_HALMA|RIBOSE-5-PHOSPHATE isomerase A|Haloarcula marismortui (strain ATCC 43049

Query: 3 GADPTLR 9
G DPTLR
Sbjct: 153 GGDPTLR 159


>sp|GCSPA_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 3 GADPTL 8
GADPT+
Sbjct: 240 GADPTM 245


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 SGADPTLRD 10
S DP++RD
Sbjct: 264 SSPDPSIRD 272


>sp|GATD_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina acetivorans (strain ATCC

Query: 3 GADPTLRD 10
GADPT+ D
Sbjct: 306 GADPTVLD 313




51|Sequence|251|260|PTLRDQDGCL

>sp|COFC_METPE|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosphaerula palustris (strain ATCC

Query: 3 LRDQDG 8
LRDQDG
Sbjct: 79 LRDQDG 84


>sp|Y460_ARCFU|UPF0216 protein AF_0460|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PTLRDQDG 8
PT+R +DG
Sbjct: 33 PTIRAKDG 40


>sp|NPD2_ARCFU|NAD-DEPENDENT protein deacylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PTLRDQDG 8
PT R +DG
Sbjct: 33 PTFRGEDG 40


>sp|AATC_METBU|A-TYPE ATP synthase subunit C|Methanococcoides burtonii (strain DSM 6242

Query: 1 PTLRDQDG 8
PTL++ DG
Sbjct: 172 PTLKEYDG 179


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 TLRDQDGC 9
TLR++D C
Sbjct: 539 TLRNRDDC 546


>sp|FAEHP_METST|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 TLRDQDG 8
T+RD DG
Sbjct: 316 TMRDNDG 322




52|Sequence|256|265|QDGCLPEEVT

>sp|SRP54_METBF|SIGNAL recognition particle 54 kDa|Methanosarcina barkeri (strain Fusaro /

Query: 3 GCLPEEV 9
GC PEEV
Sbjct: 403 GCSPEEV 409


>sp|FAE_METBF|5,6,7,8-TETRAHYDROMETHANOPTERIN hydro-lyase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DGCLPEE 8
DG LPEE
Sbjct: 112 DGVLPEE 118


>sp|Y916_METJA|UNCHARACTERIZED protein MJ0916|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QDGCLPEEVT 10
Q+GCL + VT
Sbjct: 45 QNGCLKDYVT 54


>sp|SRP54_METMA|SIGNAL recognition particle 54 kDa|Methanosarcina mazei (strain ATCC

Query: 3 GCLPEEV 9
GC PE+V
Sbjct: 403 GCSPEDV 409


>sp|AOCD_ARCFU|ORNITHINE cyclodeaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DGCLPEEVT 10
DG LPE +T
Sbjct: 312 DGPLPEVIT 320


>sp|RSGA_METMA|SMALL ribosomal subunit biogenesis GTPase|Methanosarcina mazei (strain

Query: 1 QDGCLPEE 8
+DG +PEE
Sbjct: 310 KDGIIPEE 317


>sp|RSGA_METAC|SMALL ribosomal subunit biogenesis GTPase|Methanosarcina acetivorans

Query: 1 QDGCLPEE 8
+DG +PEE
Sbjct: 314 RDGIIPEE 321


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 1 QDGCLPEE 8
+DG +PEE
Sbjct: 589 EDGRIPEE 596


>sp|CDC64_HALSA|ORC1-TYPE DNA replication protein 4|Halobacterium salinarum (strain ATCC

Query: 1 QDGCLPEEV 9
QDG L E+V
Sbjct: 237 QDGVLSEDV 245


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 1 QDGCLPEE 8
+DG +PEE
Sbjct: 589 EDGRIPEE 596


>sp|FAU1_HALWD|PROBABLE ribonuclease FAU-1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 QDGCLPEEVT 10
DG + EEVT
Sbjct: 263 SDGAVAEEVT 272




53|Sequence|261|270|PEEVTGCKTV

>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PEEVTGCK 8
PEEVT CK
Sbjct: 1139 PEEVTSCK 1146


>sp|AROE_THEKO|SHIKIMATE dehydrogenase (NADP(+))|Thermococcus kodakarensis (strain ATCC

Query: 3 EVTGCKTV 10
E+ GCKTV
Sbjct: 228 ELRGCKTV 235


>sp|PURP_PYRIL|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 EEVTGCK 8
EEV GC+
Sbjct: 254 EEVVGCR 260


>sp|RS2_METS3|SMALL ribosomal subunit protein uS2|Methanobrevibacter smithii (strain

Query: 3 EVTGCKTV 10
EVTG KT+
Sbjct: 84 EVTGAKTI 91


>sp|PDXT_METB6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanoregula boonei (strain

Query: 1 PEEVTGC 7
PE++ GC
Sbjct: 40 PEDLAGC 46


>sp|RNZ_METKA|RIBONUCLEASE Z|Methanopyrus kandleri (strain AV19 /

Query: 1 PEEVTGCKTV 10
PE V GC+ +
Sbjct: 197 PENVRGCQVL 206


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 2 EEVTGCKTV 10
+E TGC+ +
Sbjct: 177 QEATGCRVI 185


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 2 EEVTGCKTV 10
+E TGC+ +
Sbjct: 177 QEATGCRVI 185


>sp|RS2_METST|SMALL ribosomal subunit protein uS2|Methanosphaera stadtmanae (strain

Query: 3 EVTGCKTV 10
EVTG KT+
Sbjct: 84 EVTGTKTI 91


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PEEVTGCKT 9
PE+VTG K
Sbjct: 249 PEDVTGEKA 257




54|Sequence|266|275|GCKTVSLVLQ

>sp|DHQS_METMJ|3-DEHYDROQUINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GCKTVSLVLQ 10
G TVSLVLQ
Sbjct: 271 GDATVSLVLQ 280


>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GCKTVSLVLQ 10
GCK +SL Q
Sbjct: 183 GCKVISLNAQ 192




55|Sequence|271|282|SLVLQRHTTGKA

>sp|BRIX_METMP|PROBABLE Brix domain-containing ribosomal biogenesis|Methanococcus

Query: 1 SLVLQRHTTGKA 12
SL LQR +GKA
Sbjct: 75 SLKLQREVSGKA 86


>sp|NTPPA_METMA|DTTP/UTP pyrophosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VLQRHTTGKA 12
+L RH+ GKA
Sbjct: 45 LLIRHSIGKA 54


>sp|RL32_HALMA|LARGE ribosomal subunit protein eL32|Haloarcula marismortui (strain ATCC

Query: 2 LVLQRHTTGK 11
L+ QRH GK
Sbjct: 117 LLTQRHRVGK 126


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VLQRHTTGK 11
+ QR+ TGK
Sbjct: 512 IAQRYVTGK 520


>sp|SYFA_THEAC|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LVLQRHTT 9
LVL+ HTT
Sbjct: 326 LVLRTHTT 333


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LVLQRHTTGKA 12
L+L+ HTT +
Sbjct: 317 LILRTHTTASS 327


>sp|SYFA_ARCFU|PHENYLALANINE--TRNA ligase alpha subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LVLQRHTTG 10
LVL+ HTT
Sbjct: 310 LVLRTHTTA 318






THE END