1|SequenceR|10|1|STSADVPIRM
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 3 SADVPIRM 10
S++VPIRM
Sbjct: 535 SSNVPIRM 542
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 3 SADVPIRM 10
S++VPIRM
Sbjct: 535 SSNVPIRM 542
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 3 SADVPIRM 10
S++VPIRM
Sbjct: 535 SSNVPIRM 542
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 3 SADVPIRM 10
S++VPIRM
Sbjct: 535 SSNVPIRM 542
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 3 SADVPIRM 10
S+ VPIRM
Sbjct: 518 SSQVPIRM 525
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 TSADVPI 8
T+ADVP+
Sbjct: 309 TAADVPV 315
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 STSADVPIR 9
+T++DVP++
Sbjct: 700 ATNSDVPVQ 708
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 1 STSADVPI 8
STS D+PI
Sbjct: 396 STSFDIPI 403
2|SequenceR|15|6|PTFRRSTSAD
>sp|YHL4_HCMVA|UNCHARACTERIZED protein HHLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PTFRRSTSA 9
PT RRS S+
Sbjct: 18 PTVRRSVSS 26
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 1 PTFRRSTSAD 10
P FR + SAD
Sbjct: 172 PLFRITASAD 181
3|SequenceR|20|11|LATSPPTFRR
>sp|PG137_VARV|PROTEIN OPG137|Variola virus
Query: 3 TSPPTFRR 10
T PPTFRR
Sbjct: 93 TPPPTFRR 100
>sp|PG137_VAR67|PROTEIN OPG137|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 TSPPTFRR 10
T PPTFRR
Sbjct: 93 TPPPTFRR 100
>sp|PG137_VACCC|PROTEIN OPG137|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 TSPPTFRR 10
T PPTFRR
Sbjct: 92 TPPPTFRR 99
>sp|PG137_VACCA|PROTEIN OPG137|Vaccinia virus (strain Ankara) (VACV)
Query: 3 TSPPTFRR 10
T PPTFRR
Sbjct: 92 TPPPTFRR 99
>sp|PG137_MONPV|PROTEIN OPG137|Monkeypox virus (MPXV)
Query: 3 TSPPTFRR 10
T PPTFRR
Sbjct: 92 TPPPTFRR 99
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LATSPPTF 8
+ATS PTF
Sbjct: 39 VATSSPTF 46
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 TSPPTFRR 10
TSPPT R+
Sbjct: 431 TSPPTLRQ 438
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 TSPPTFRR 10
TSPPT R+
Sbjct: 431 TSPPTLRQ 438
>sp|PG061_VACCC|PROTEIN OPG061|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 SPPTFR 9
+PP+FR
Sbjct: 108 NPPSFR 113
>sp|PG061_MONPV|PROTEIN OPG061|Monkeypox virus (MPXV)
Query: 4 SPPTFR 9
+PP+FR
Sbjct: 108 NPPSFR 113
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 1 LATSPPTFRR 10
LATS PT R
Sbjct: 340 LATSAPTVDR 349
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 TSPPTFRR 10
T PPT+ R
Sbjct: 132 TMPPTYER 139
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPNGPPCFQR 279
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPCGPPCFQR 279
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPCGPPCFQR 279
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPCGPPCFQR 279
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 1 LATSPP 6
LATSPP
Sbjct: 211 LATSPP 216
>sp|GL_HHV1K|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain KOS)
Query: 1 LATSPPTFRR 10
+ATS PT RR
Sbjct: 199 IATSDPTPRR 208
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 LATSPPTFRR 10
L PP F+R
Sbjct: 270 LPDGPPCFQR 279
>sp|GL_HHV11|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain 17)
Query: 1 LATSPPTFRR 10
+ATS PT RR
Sbjct: 199 IATSDPTPRR 208
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 TSPPTFRR 10
TSPPT ++
Sbjct: 431 TSPPTLQQ 438
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 TSPPTFRR 10
TSPPT ++
Sbjct: 431 TSPPTLQQ 438
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 TSPPTFRR 10
TSPPT ++
Sbjct: 431 TSPPTLQQ 438
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 TSPPTFRR 10
TSPPT ++
Sbjct: 431 TSPPTLQQ 438
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 LATSPPTFR 9
L PPTF+
Sbjct: 1441 LFQGPPTFK 1449
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 3 TSPPTFRR 10
+SPP F R
Sbjct: 1635 SSPPAFDR 1642
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 3 TSPPTFRR 10
+SPP F R
Sbjct: 1635 SSPPAFDR 1642
>sp|NSS_CCHFI|NON-STRUCTURAL protein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 TSPPTFR 9
+SPP FR
Sbjct: 90 SSPPLFR 96
4|SequenceR|25|16|MKGPSLATSP
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 MKGPSLATSP 10
M GP L T P
Sbjct: 175 MPGPGLLTMP 184
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 GPSLATSP 10
GP L TSP
Sbjct: 972 GPHLLTSP 979
5|SequenceR|30|21|PLAESMKGPS
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 PLAESMKGPS 10
PL+ ++ GPS
Sbjct: 2260 PLSAALSGPS 2269
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 PLAESMKGPS 10
PL+ ++ GPS
Sbjct: 2260 PLSAALSGPS 2269
6|SequenceR|35|26|DPAGLPLAES
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 2 PAGLPLAE 9
PAGLPL E
Sbjct: 80 PAGLPLRE 87
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 2 PAGLPLAE 9
P GLPL E
Sbjct: 79 PTGLPLRE 86
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 DPAGLPLAES 10
DPAG P+AE+
Sbjct: 489 DPAGPPVAEA 498
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 PAGLPLAE 9
P GLP E
Sbjct: 2357 PRGLPFTE 2364
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 DPAGLP 6
+PAGLP
Sbjct: 762 EPAGLP 767
7|SequenceR|40|31|LAAGADPAGL
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LAAGADPAGL 10
+AAG DPA L
Sbjct: 33 IAAGIDPALL 42
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 AAGADPAGL 10
AAG+DP L
Sbjct: 106 AAGSDPPRL 114
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 LAAGADP 7
LAAG DP
Sbjct: 179 LAAGNDP 185
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 AAGADP 7
AAG+DP
Sbjct: 106 AAGSDP 111
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 LAAGADPAG 9
LAAGA P G
Sbjct: 2935 LAAGARPRG 2943
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LAAGADPAG 9
LAAGA P G
Sbjct: 2957 LAAGARPRG 2965
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 LAAGADPAG 9
LAAGA P G
Sbjct: 2930 LAAGARPRG 2938
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 6 DPAGL 10
DPAGL
Sbjct: 45 DPAGL 49
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 1 LAAGADPA 8
LA+GA P+
Sbjct: 760 LASGASPS 767
>sp|TEG6_HHV2H|TEGUMENT protein UL55|Human herpesvirus 2 (strain HG52)
Query: 3 AGADPAG 9
+GA PAG
Sbjct: 122 SGASPAG 128
8|SequenceR|45|36|RLKGALAAGA
>sp|BEL3_FOAMV|PROTEIN Bel-3|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 RLKGALAAGA 10
RLKGA+ GA
Sbjct: 14 RLKGAVKQGA 23
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GALAAGA 10
GALAAGA
Sbjct: 2955 GALAAGA 2961
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 4 GALAAGA 10
GALAAGA
Sbjct: 2928 GALAAGA 2934
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 4 GALAAGA 10
GALAAGA
Sbjct: 2933 GALAAGA 2939
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 3 KGALAAGA 10
KGA+ +GA
Sbjct: 276 KGAMGSGA 283
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 3 KGALAAGA 10
KGA+ +GA
Sbjct: 278 KGAMGSGA 285
9|SequenceR|50|41|SRDGSRLKGA
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 DGSRLKGA 10
DGS +KGA
Sbjct: 1687 DGSTMKGA 1694
>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)
Query: 3 DGSRLKGA 10
+G RLKGA
Sbjct: 412 NGGRLKGA 419
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 2 RDGSRL 7
RDGSRL
Sbjct: 296 RDGSRL 301
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 DGSRLKGA 10
DGS +KG+
Sbjct: 1687 DGSSMKGS 1694
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 4 GSRLKGA 10
GS+LKG+
Sbjct: 1997 GSKLKGS 2003
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 4 GSRLKGA 10
GS+LKG+
Sbjct: 1997 GSKLKGS 2003
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 4 GSRLKGA 10
GS+LKG+
Sbjct: 1997 GSKLKGS 2003
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 RDGSRLK 8
+DG RLK
Sbjct: 625 KDGPRLK 631
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 RDGSRLK 8
+DG RLK
Sbjct: 627 KDGPRLK 633
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 RDGSRLK 8
+DG RLK
Sbjct: 626 KDGPRLK 632
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 3 DGSRLK 8
DGS+LK
Sbjct: 310 DGSKLK 315
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 3 DGSRLK 8
DGS+LK
Sbjct: 310 DGSKLK 315
>sp|PHOSP_RABVP|PHOSPHOPROTEIN virus (strain Pasteur vaccins
Query: 1 SRDGSRL 7
+RDGS+L
Sbjct: 251 ARDGSKL 257
10|SequenceR|55|46|LVEVMSRDGS
***** No hits found ******
11|SequenceR|60|51|GPHDALVEVM
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 GPHDALVE 8
GP DAL +
Sbjct: 1013 GPADALTD 1020
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 GPHDALVE 8
GP DAL +
Sbjct: 1013 GPADALTD 1020
12|SequenceR|65|56|TRVLEGPHDA
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 2 RVLEGPH 8
RVL GPH
Sbjct: 280 RVLVGPH 286
>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)
Query: 2 RVLEGPH 8
RVL GPH
Sbjct: 280 RVLVGPH 286
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 4 LEGPHDA 10
+EGP D+
Sbjct: 293 IEGPQDS 299
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 TRVLEGP 7
T+VLE P
Sbjct: 1007 TKVLEAP 1013
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 TRVLEGP 7
T+VLE P
Sbjct: 1007 TKVLEAP 1013
13|SequenceR|70|61|FNPSDTRVLE
>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain
Query: 1 FNPSDTR 7
FNP DTR
Sbjct: 436 FNPIDTR 442
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 FNPSDT 6
F PSDT
Sbjct: 850 FQPSDT 855
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 FNPSDT 6
F PSDT
Sbjct: 850 FQPSDT 855
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 FNPSDT 6
F PSDT
Sbjct: 850 FQPSDT 855
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 FNPSDT 6
F PSDT
Sbjct: 850 FQPSDT 855
>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)
Query: 1 FNPSDT 6
F PSDT
Sbjct: 35 FQPSDT 40
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 FNPSDTRVLE 10
FNP +LE
Sbjct: 1095 FNPEAASILE 1104
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 FNPSDTRVLE 10
FNP +LE
Sbjct: 1095 FNPEAASILE 1104
>sp|PB1F2_I03A0|PROTEIN PB1-F2|Influenza A virus (strain A/Hong
Query: 2 NPSDTRVLE 10
+PS TR+++
Sbjct: 32 HPSSTRLMD 40
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 NPSDTRV 8
NP DT++
Sbjct: 899 NPQDTKI 905
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 FNPSDTRVL 9
F+P +T+V+
Sbjct: 977 FSPMETKVI 985
>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58
Query: 1 FNPSDT 6
FNP DT
Sbjct: 260 FNPEDT 265
14|SequenceR|75|66|LVSCLFNPSD
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 LVSCLFNPS 9
L++C+F+PS
Sbjct: 879 LLTCVFHPS 887
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 LVSCLFNP 8
L++CLF+P
Sbjct: 876 LLACLFHP 883
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 LVSCLFNPS 9
+++CLF+P+
Sbjct: 876 MLTCLFHPA 884
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 LVSCLFNPS 9
+++CLF+P+
Sbjct: 876 MLTCLFHPA 884
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 1 LVSCLFNPSD 10
++ C +NP+D
Sbjct: 201 IIMCAWNPAD 210
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 SCLFNPSD 10
SC NPSD
Sbjct: 1717 SCWENPSD 1724
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 LVSCLFNPS 9
L++CL +PS
Sbjct: 873 LLTCLLHPS 881
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 3 SCLFNPSD 10
SC F+P D
Sbjct: 232 SCHFSPQD 239
>sp|VP2_POVJC|MINOR capsid protein VP2|JC polyomavirus (JCPyV) (JCV)
Query: 5 LFNPSD 10
LFNP D
Sbjct: 124 LFNPED 129
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 SCLFNP 8
SCLF P
Sbjct: 2223 SCLFKP 2228
>sp|UL128_HCMVA|UNCHARACTERIZED protein UL128|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LVSCLFNP 8
L SC +NP
Sbjct: 93 LTSCNYNP 100
>sp|UL06_HCMVA|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SCLFN 7
SCLFN
Sbjct: 42 SCLFN 46
>sp|UL128_HCMVM|ENVELOPE protein UL128|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LVSCLFNP 8
L SC +NP
Sbjct: 93 LTSCNYNP 100
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 2 VSCLFNP 8
++CLF P
Sbjct: 264 LACLFQP 270
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 2 VSCLFNP 8
++CLF P
Sbjct: 264 LACLFQP 270
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 LVSCLFNPSD 10
L CL +P+D
Sbjct: 1657 LYGCLSHPTD 1666
>sp|UL06_HCMVM|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SCLFN 7
SCLFN
Sbjct: 38 SCLFN 42
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 4 CLFNPS 9
CL NP+
Sbjct: 94 CLLNPN 99
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 VSCLFNP 8
+SC F P
Sbjct: 212 ISCFFTP 218
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 4 CLFNPS 9
CL NP+
Sbjct: 94 CLLNPN 99
>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 3 SCLFNPS 9
+CL NPS
Sbjct: 393 NCLNNPS 399
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 LVSCLFN 7
L+SC +N
Sbjct: 753 LISCCYN 759
>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 3 SCLFNPS 9
+CL NPS
Sbjct: 393 NCLNNPS 399
>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus
Query: 3 SCLFNPS 9
+CL NPS
Sbjct: 393 NCLNNPS 399
>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate
Query: 3 SCLFNPS 9
+CL NPS
Sbjct: 393 NCLNNPS 399
>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)
Query: 3 SCLFNPS 9
+CL NPS
Sbjct: 393 NCLNNPS 399
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 3 SCLFNPS 9
SC+++PS
Sbjct: 317 SCVYSPS 323
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 4 CLFNPS 9
CL NP+
Sbjct: 94 CLLNPN 99
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 2 VSCLFNP 8
V C +NP
Sbjct: 376 VECRYNP 382
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 2 VSCLFNPS 9
+ CLFN S
Sbjct: 322 IDCLFNVS 329
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 4 CLFNP 8
CLF+P
Sbjct: 739 CLFSP 743
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VSCLFNPS 9
+ CLFN S
Sbjct: 606 IECLFNVS 613
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 3 SCLFNP 8
SCL++P
Sbjct: 281 SCLYHP 286
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 4 CLFNP 8
CLF+P
Sbjct: 739 CLFSP 743
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 4 CLFNP 8
CLF+P
Sbjct: 739 CLFSP 743
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 4 CLFNP 8
CLF+P
Sbjct: 737 CLFSP 741
>sp|CEP1_HHV11|CYTOPLASMIC envelopment protein 1|Human herpesvirus 1 (strain 17)
Query: 5 LFNPSD 10
LFNP D
Sbjct: 130 LFNPRD 135
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 LVSCLFN 7
L+SC +N
Sbjct: 752 LISCCYN 758
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 4 CLFNP 8
CLF+P
Sbjct: 739 CLFSP 743
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 LVSCLFN 7
L+SC +N
Sbjct: 752 LISCCYN 758
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 3 SCLFNP 8
SCL++P
Sbjct: 279 SCLYHP 284
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 LVSCLFN 7
LVSC F+
Sbjct: 1454 LVSCTFS 1460
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 LVSCLFN 7
LVSC F+
Sbjct: 1454 LVSCTFS 1460
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 LVSCLFN 7
LVSC F+
Sbjct: 1454 LVSCTFS 1460
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 2 VSCLFNPS 9
+ CLFN S
Sbjct: 606 IDCLFNIS 613
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 LVSCLFNPS 9
+++C FN S
Sbjct: 243 IITCRFNTS 251
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 LVSCLFNPS 9
L++C FN +
Sbjct: 243 LITCRFNTT 251
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 LVSCLFNPS 9
L++C FN +
Sbjct: 243 LITCRFNTT 251
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 LVSCLFNPS 9
+++C FN S
Sbjct: 243 IITCRFNTS 251
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 LVSCLFNPSD 10
LV CLF+ D
Sbjct: 373 LVLCLFSGVD 382
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 3 SCLFNPS 9
SC+++PS
Sbjct: 349 SCVYSPS 355
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 4 CLFNP 8
CLF+P
Sbjct: 739 CLFSP 743
15|SequenceR|80|71|RWHTPLVSCL
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 1 RWHTPLVSCL 10
RW+ P CL
Sbjct: 101 RWNAPPTGCL 110
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RWHTPLVSCL 10
RW PLV +
Sbjct: 44 RWAHPLVGTI 53
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RWHTPLVSCL 10
RW PLV +
Sbjct: 44 RWAHPLVGTI 53
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RWHTPLVSCL 10
RW PLV +
Sbjct: 44 RWAHPLVGTI 53
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 WHTPLVS 8
W TPL S
Sbjct: 265 WVTPLTS 271
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 1 RWHTPLVSCL 10
RW T SCL
Sbjct: 178 RWQTVTKSCL 187
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 TPLVSC 9
TP++SC
Sbjct: 1387 TPILSC 1392
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 TPLVSC 9
TP++SC
Sbjct: 1387 TPILSC 1392
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 5 PLVSC 9
PL+SC
Sbjct: 751 PLISC 755
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 RWHTPLVSCL 10
RW +++CL
Sbjct: 1257 RWTRDIIACL 1266
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 5 PLVSC 9
PL+SC
Sbjct: 751 PLISC 755
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 RWHTPLVSCL 10
RW +++CL
Sbjct: 1257 RWTRDIIACL 1266
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 1 RWHTPLVSCL 10
RW T SCL
Sbjct: 178 RWRTVTQSCL 187
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 2 WHTPLVSCL 10
WH +++C+
Sbjct: 67 WHLGIIACI 75
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 WHTPLVS 8
W TPLV
Sbjct: 1330 WATPLVG 1336
>sp|VMI2_HHV8P|VIRAL macrophage inflammatory protein 2|Human herpesvirus 8 type P
Query: 2 WHTPLVSCL 10
WH P CL
Sbjct: 28 WHRPDKCCL 36
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 2 WHTP 5
WHTP
Sbjct: 410 WHTP 413
16|SequenceR|85|76|LTKNCRWHTP
>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain GD1)
Query: 1 LTKNCRW 7
L K CRW
Sbjct: 180 LVKPCRW 186
>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 LTKNCRW 7
L K CRW
Sbjct: 180 LVKPCRW 186
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 2 TKNCRWHT 9
T +C+W T
Sbjct: 539 THSCKWAT 546
>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 LTKNCRW 7
L K CRW
Sbjct: 180 LVKPCRW 186
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 TKNCRWHTP 10
T N WH P
Sbjct: 574 TNNGTWHCP 582
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 6 RWHTP 10
RWH P
Sbjct: 1086 RWHKP 1090
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 6 RWHTP 10
RWH P
Sbjct: 1086 RWHKP 1090
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 6 RWHTP 10
RWH P
Sbjct: 1087 RWHKP 1091
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KNCRW 7
KNC W
Sbjct: 996 KNCHW 1000
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 KNCRW 7
KNC W
Sbjct: 996 KNCHW 1000
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KNCRW 7
KNC W
Sbjct: 996 KNCHW 1000
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 TKNCRW 7
+KN RW
Sbjct: 1763 SKNMRW 1768
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LTKNCR 6
L KNCR
Sbjct: 395 LAKNCR 400
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LTKNCR 6
L KNCR
Sbjct: 395 LAKNCR 400
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 3 KNCRW 7
+ CRW
Sbjct: 8 RGCRW 12
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 3 KNCRW 7
+ CRW
Sbjct: 7 RGCRW 11
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 LTKNCRWHTP 10
L+K C H P
Sbjct: 1373 LSKCCTRHVP 1382
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 LTKNCRWHTP 10
L+K C H P
Sbjct: 1373 LSKCCTRHVP 1382
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LTKNCRWH 8
L CRW+
Sbjct: 243 LQLRCRWY 250
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LTKNCRWH 8
L CRW+
Sbjct: 243 LQLRCRWY 250
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 5 CRWHT 9
CR+HT
Sbjct: 846 CRFHT 850
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 TKNCRWH 8
TK+ WH
Sbjct: 9 TKHALWH 15
17|SequenceR|90|81|KFAIPLTKNC
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 KFAIPLTKNC 10
K+A L KNC
Sbjct: 95 KYATKLKKNC 104
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 KFAIPLTKNC 10
K+A L KNC
Sbjct: 95 KYATKLKKNC 104
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 1 KFAIPLTKN 9
K+AIPL N
Sbjct: 301 KYAIPLAYN 309
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 KFAIPLTKNC 10
K+A L KNC
Sbjct: 95 KYATKLKKNC 104
>sp|GO_HHV7J|GLYCOPROTEIN U47 homolog|Human herpesvirus 7 (strain JI)
Query: 4 IPLTKNC 10
IP++KNC
Sbjct: 68 IPISKNC 74
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 KFAIPLTKNC 10
K+A L KNC
Sbjct: 95 KYAAKLKKNC 104
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 2 FAIPLTKNC 10
+A+P+ K C
Sbjct: 509 YALPVEKGC 517
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 2 FAIPLTKNC 10
+A+P+ K C
Sbjct: 514 YALPVEKGC 522
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 2 FAIPLTKNC 10
+A+P+ K C
Sbjct: 514 YALPVEKGC 522
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 FAIPLTKNC 10
+A+P+ K C
Sbjct: 378 YALPVEKGC 386
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 5 PLTKNC 10
PLT NC
Sbjct: 633 PLTLNC 638
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 5 PLTKNC 10
PLT NC
Sbjct: 632 PLTLNC 637
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 5 PLTKNC 10
PLT NC
Sbjct: 567 PLTLNC 572
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 KFAIPLTK 8
KFA PLT+
Sbjct: 1537 KFANPLTQ 1544
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 4 IPLTKNC 10
+PL NC
Sbjct: 280 VPLDSNC 286
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 1 KFAIPLTKN 9
KF PLT N
Sbjct: 508 KFCRPLTDN 516
>sp|GQ2_HHV6U|GLYCOPROTEIN Q2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KFAIPLTKN 9
KF PLT N
Sbjct: 66 KFCRPLTDN 74
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KFAIPLTKN 9
KF PLT N
Sbjct: 508 KFCRPLTDN 516
>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)
Query: 5 PLTKNC 10
PLT+ C
Sbjct: 108 PLTRKC 113
18|SequenceR|95|86|GLAVVKFAIP
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 GLAVVKFAI 9
G+A++K+A+
Sbjct: 1123 GVAIIKYAV 1131
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GLAVVKFAI 9
G AVV FAI
Sbjct: 706 GSAVVSFAI 714
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GLAVVKFAI 9
G AVV FAI
Sbjct: 706 GSAVVSFAI 714
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GLAVVKFAI 9
G AVV FAI
Sbjct: 706 GSAVVSFAI 714
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GLAVVKFAI 9
G AVV FAI
Sbjct: 706 GSAVVSFAI 714
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GLAVVKFAI 9
G AVV FAI
Sbjct: 706 GSAVVSFAI 714
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 GLAVVK 6
GLAVVK
Sbjct: 3453 GLAVVK 3458
19|SequenceR|100|91|GDPVDGLAVV
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 2 DPVDGLAV 9
DP+DG V
Sbjct: 57 DPIDGRVV 64
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 2 DPVDGLAV 9
DP+DG V
Sbjct: 57 DPIDGRVV 64
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 2 DPVDGLA 8
DP DGL+
Sbjct: 455 DPYDGLS 461
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 2 DPVDGLAV 9
DP+DG V
Sbjct: 57 DPIDGRVV 64
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 DPVDGLAV 9
DP+DG +
Sbjct: 57 DPIDGRVI 64
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 DPVDGLAV 9
DP+DG +
Sbjct: 57 DPIDGRVI 64
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 DPVDGLAV 9
DP+DG +
Sbjct: 57 DPIDGRVI 64
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 4 VDGLAVV 10
VDG+A+V
Sbjct: 87 VDGIAIV 93
>sp|TAX_HTL1L|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 DPVDGLAV 9
DP+DG +
Sbjct: 56 DPIDGRVI 63
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 2 DPVDGL 7
DP DGL
Sbjct: 439 DPYDGL 444
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 2 DPVDGL 7
DP DGL
Sbjct: 440 DPYDGL 445
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 GDPVDGLAVV 10
G PVDG+ V
Sbjct: 271 GRPVDGVLVT 280
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 GDPVDGLAVV 10
G PVDG+ V
Sbjct: 271 GRPVDGVLVT 280
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 2 DPVDGL 7
DP DGL
Sbjct: 440 DPYDGL 445
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GDPVDG 6
G PVDG
Sbjct: 127 GPPVDG 132
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GDPVDG 6
G PVDG
Sbjct: 127 GPPVDG 132
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 GDPVDGLAVV 10
GD V+G+ V
Sbjct: 213 GDTVEGIGAV 222
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 GDPVDGLAVV 10
GD V+G+ V
Sbjct: 213 GDTVEGIGAV 222
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 1 GDPVDGLAVV 10
GD V+G+ V
Sbjct: 213 GDTVEGIGAV 222
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 GDPVDGLAV 9
GD +DG+ V
Sbjct: 637 GDTLDGVRV 645
20|SequenceR|105|96|VTVLTGDPVD
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 TVLTGDPVD 10
T LTG PVD
Sbjct: 2087 TRLTGSPVD 2095
>sp|UL10_HCMVA|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VTVLTGDPV 9
VTV GDPV
Sbjct: 34 VTVRVGDPV 42
>sp|UL10_HCMVM|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VTVLTGDPV 9
VTV GDPV
Sbjct: 34 VTVRVGDPV 42
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 3 VLTGDPVD 10
+L+GDP D
Sbjct: 45 ILSGDPSD 52
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 3 VLTGDPVD 10
+L+GDP D
Sbjct: 45 ILSGDPSD 52
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 3 VLTGDPVD 10
+L+GDP D
Sbjct: 45 ILSGDPSD 52
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 3 VLTGDPVD 10
+L+GDP D
Sbjct: 45 ILSGDPSD 52
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 3 VLTGDPVD 10
+L+GDP D
Sbjct: 45 ILSGDPSD 52
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 5 TGDPVD 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 5 TGDPVD 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 5 TGDPVD 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 5 TGDPVD 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 5 TGDPVD 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 5 TGDPVD 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 5 TGDPVD 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 5 TGDPVD 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 5 TGDPVD 10
TGDP+D
Sbjct: 1212 TGDPLD 1217
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 1 VTVLTGDPV 9
V+ TGDPV
Sbjct: 25 VSRRTGDPV 33
>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 5 TGDPVD 10
TGDP D
Sbjct: 438 TGDPSD 443
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 5 TGDPVD 10
TGDP D
Sbjct: 438 TGDPSD 443
>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 5 TGDPVD 10
TGDP D
Sbjct: 438 TGDPSD 443
>sp|PHOSP_PI1HD|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 5 TGDPVD 10
TGDP D
Sbjct: 438 TGDPSD 443
>sp|TR14_HCMVA|PROTEIN TRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VTVLTGD 7
VTVL GD
Sbjct: 96 VTVLIGD 102
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 TVLTGD-PVD 10
TV+TGD P++
Sbjct: 584 TVMTGDTPIN 593
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 3 VLTGDPV 9
V+T DPV
Sbjct: 144 VMTDDPV 150
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 3 VLTGDPV 9
V+T DPV
Sbjct: 144 VMTDDPV 150
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 VLTGDPV 9
VLTGD V
Sbjct: 3435 VLTGDSV 3441
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 3 VLTGDPV 9
V+T DPV
Sbjct: 144 VMTDDPV 150
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 VLTGDPV 9
VLTGD V
Sbjct: 3455 VLTGDSV 3461
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 VLTGDPV 9
VLTGD V
Sbjct: 3485 VLTGDSV 3491
>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)
Query: 2 TVLTGDPV 9
TV+ G PV
Sbjct: 42 TVINGGPV 49
>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 TVLTGDPV 9
TV+ G PV
Sbjct: 42 TVINGGPV 49
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 VLTGDPV 9
VLTGD V
Sbjct: 3435 VLTGDSV 3441
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 VLTGDPV 9
VLTGD V
Sbjct: 3455 VLTGDSV 3461
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 VLTGDPV 9
VLTGD V
Sbjct: 3485 VLTGDSV 3491
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VTVLTGD 7
VTV TGD
Sbjct: 421 VTVHTGD 427
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VTVLTGD 7
VTV TGD
Sbjct: 421 VTVHTGD 427
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VTVLTGD 7
VTV TGD
Sbjct: 421 VTVHTGD 427
21|SequenceR|110|101|DNGAMVTVLT
>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2
Query: 1 DNGAMVTVL 9
+NGAM+T L
Sbjct: 369 ENGAMITKL 377
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 DNGAMVTVL 9
D GA +TVL
Sbjct: 462 DTGADITVL 470
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 DNGAMVTVL 9
D GA +TVL
Sbjct: 462 DTGADITVL 470
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 DNGAMVTVL 9
D GA +TVL
Sbjct: 462 DTGADITVL 470
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 DNGAMVTVL 9
D GA +TVL
Sbjct: 462 DTGADITVL 470
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 DNGAMVTVLT 10
D GA +VLT
Sbjct: 564 DTGAQHSVLT 573
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 DNGAMVTVLT 10
D GA +VLT
Sbjct: 564 DTGAQHSVLT 573
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 DNGAMVTVLT 10
D GA +VLT
Sbjct: 564 DTGAQHSVLT 573
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 DNGAMVTVL 9
D GA +TVL
Sbjct: 481 DTGADMTVL 489
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 DNGAMVTVL 9
D GA +TVL
Sbjct: 481 DTGADMTVL 489
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 DNGAMVTVL 9
D GA +TVL
Sbjct: 481 DTGADMTVL 489
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 DNGAMVTVL 9
D GA +TVL
Sbjct: 481 DTGADMTVL 489
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 DNGAMVTVL 9
D GA +TVL
Sbjct: 481 DTGADMTVL 489
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 DNGAMVTVL 9
D GA +TVL
Sbjct: 481 DTGADMTVL 489
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 2 NGAMVTVLT 10
NG+ TV+T
Sbjct: 216 NGSCFTVMT 224
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 NGAMVTVLT 10
NG+ TV+T
Sbjct: 216 NGSCFTVMT 224
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 2 NGAMVTVLT 10
NG+ TV+T
Sbjct: 207 NGSCFTVMT 215
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 NGAMVTVLT 10
NG+ TV+T
Sbjct: 215 NGSCFTVMT 223
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 2 NGAMVTVLT 10
NG+ TV+T
Sbjct: 215 NGSCFTVMT 223
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 2 NGAMVTVLT 10
NG+ TV+T
Sbjct: 215 NGSCFTVMT 223
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 NGAMVTVLT 10
NG+ TV+T
Sbjct: 215 NGSCFTVMT 223
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 NGAMVTVLT 10
NG+ TV+T
Sbjct: 215 NGSCFTVMT 223
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 NGAMVTVLT 10
NG+ TV+T
Sbjct: 215 NGSCFTVMT 223
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 NGAMVTVLT 10
NG+ TV+T
Sbjct: 215 NGSCFTVMT 223
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 2 NGAMVTVLT 10
NG+ TV+T
Sbjct: 215 NGSCFTVMT 223
22|SequenceR|115|106|ASYNEDNGAM
>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)
Query: 1 ASYNEDNGA 9
SY++D GA
Sbjct: 230 GSYSQDEGA 238
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 6 DNGAM 10
DNGAM
Sbjct: 1131 DNGAM 1135
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 6 DNGAM 10
DNGAM
Sbjct: 1131 DNGAM 1135
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 ASYNEDNG 8
+YN+D+G
Sbjct: 199 GAYNKDHG 206
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 NEDNGA 9
N DNGA
Sbjct: 1263 NTDNGA 1268
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 ASYNEDNG 8
+YN+D+G
Sbjct: 199 GAYNKDHG 206
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 YNEDNGAM 10
Y DNG M
Sbjct: 558 YLSDNGVM 565
>sp|E3_YLDV|PROTEIN E3 homolog|Yaba-like disease virus (YLDV)
Query: 2 SYNEDNG 8
+YN DNG
Sbjct: 72 NYNCDNG 78
23|SequenceR|120|111|ANRLEASYNE
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 RLEASYNE 10
RLEA+Y E
Sbjct: 866 RLEAAYRE 873
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 RLEASYNE 10
RLEA+Y E
Sbjct: 866 RLEAAYRE 873
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 3 RLEASYNE 10
RLEA+Y E
Sbjct: 864 RLEAAYRE 871
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 RLEASYNE 10
RLEA+Y E
Sbjct: 866 RLEAAYRE 873
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 3 RLEASYNE 10
RLEA+Y E
Sbjct: 880 RLEAAYRE 887
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 RLEASYNE 10
RLEA+Y E
Sbjct: 866 RLEAAYRE 873
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 RLEASYNE 10
RLEA+Y E
Sbjct: 881 RLEAAYRE 888
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 RLEASYNE 10
RLEA+Y E
Sbjct: 881 RLEAAYRE 888
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 RLEASYN 9
RLE SYN
Sbjct: 2401 RLEGSYN 2407
24|SequenceR|125|116|KMAATANRLE
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 2 MAATANRLE 10
M +T NRL+
Sbjct: 610 MVSTTNRLQ 618
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 AATANRLE 10
AATA RLE
Sbjct: 1099 AATAARLE 1106
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 KMAATANRLE 10
++AAT +LE
Sbjct: 890 RLAATTEKLE 899
25|SequenceR|130|121|RAVQNKMAAT
***** No hits found ******
26|SequenceR|135|126|RLDNFRAVQN
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 RLDNFRAVQ 9
RLD F+AV+
Sbjct: 1372 RLDMFKAVE 1380
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 LDNFRA 7
LDNFRA
Sbjct: 226 LDNFRA 231
>sp|TRX1_HCMVM|TRIPLEX capsid protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RLDNF 5
RLDNF
Sbjct: 275 RLDNF 279
>sp|TRX1_HCMVA|TRIPLEX capsid protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RLDNF 5
RLDNF
Sbjct: 275 RLDNF 279
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 2 LDNFRA 7
DNFRA
Sbjct: 226 FDNFRA 231
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 219 LENFRA 224
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 2 LDNFRAVQN 10
+D+FR +QN
Sbjct: 301 IDSFRMLQN 309
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 219 LENFRA 224
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 203 LENFRA 208
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 LDNFRA 7
L+NFRA
Sbjct: 226 LENFRA 231
27|SequenceR|140|131|SRGVFRLDNF
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 2 RGVFRLDN 9
+GVFR DN
Sbjct: 351 QGVFRYDN 358
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 RGVFRLDNF 10
RG + LDNF
Sbjct: 228 RGGWDLDNF 236
>sp|HEMA_CVHN1|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N1)
Query: 3 GVFRLDNF 10
GVF DNF
Sbjct: 322 GVFLYDNF 329
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 2 RGVFRL 7
RGVFR+
Sbjct: 497 RGVFRV 502
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 2 RGVFRL 7
RGVFR+
Sbjct: 497 RGVFRV 502
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 2 RGVFRL 7
RGVFR+
Sbjct: 496 RGVFRV 501
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 2 RGVFRL 7
RGVFR+
Sbjct: 496 RGVFRV 501
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 2 RGVFRL 7
RGVFR+
Sbjct: 496 RGVFRV 501
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 2 RGVFRL 7
RGVFR+
Sbjct: 496 RGVFRV 501
>sp|VPK2_VACCP|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 VFRLDNF 10
VF++DN+
Sbjct: 68 VFKIDNY 74
>sp|VPK2_VACCT|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Tian Tan)
Query: 4 VFRLDNF 10
VF++DN+
Sbjct: 101 VFKIDNY 107
>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)
Query: 4 VFRLDNF 10
VF++DN+
Sbjct: 101 VFKIDNY 107
>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 VFRLDNF 10
VF++DN+
Sbjct: 101 VFKIDNY 107
>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)
Query: 4 VFRLDNF 10
VF++DN+
Sbjct: 101 VFKIDNY 107
>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 VFRLDNF 10
VF++DN+
Sbjct: 101 VFKIDNY 107
28|SequenceR|145|136|SKGRGSRGVF
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 2 KGRGSR 7
KGRGSR
Sbjct: 891 KGRGSR 896
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KGRGSR 7
KGRGSR
Sbjct: 892 KGRGSR 897
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 GRGSRGVF 10
GRG GV+
Sbjct: 1494 GRGKHGVY 1501
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 GRGSRGVF 10
GRG GV+
Sbjct: 1493 GRGKHGVY 1500
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 KGRGSRG 8
KGR +RG
Sbjct: 523 KGRANRG 529
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 1 SKGRGSRG 8
S GRG+RG
Sbjct: 479 SAGRGARG 486
>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)
Query: 1 SKGRGSRGVF 10
S G GS G+F
Sbjct: 463 SPGTGSLGLF 472
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 1 SKGRGSRGVF 10
S G GS G+F
Sbjct: 463 SPGTGSLGLF 472
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 GRGSRGVF 10
GRG G++
Sbjct: 1492 GRGKHGIY 1499
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 GRGSRGVF 10
GRG G++
Sbjct: 1492 GRGKHGIY 1499
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 GRGSRGVF 10
GRG GV+
Sbjct: 1496 GRGKPGVY 1503
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 GRGSRGVF 10
GRG GV+
Sbjct: 1496 GRGKPGVY 1503
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 GRGSRGVF 10
GRG GV+
Sbjct: 1497 GRGKPGVY 1504
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 GRGSRGVF 10
GRG GV+
Sbjct: 1497 GRGKPGVY 1504
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 SKGRGSRGVF 10
S RG+ GVF
Sbjct: 527 SAARGAIGVF 536
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 SKGRGSRGVF 10
S RG+ GVF
Sbjct: 527 SAARGAIGVF 536
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 GRGSRGVF 10
GRG GV+
Sbjct: 1490 GRGKPGVY 1497
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 SKGRGSRGVF 10
S RG+ GVF
Sbjct: 527 SAARGAIGVF 536
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 SKGRGSRGVF 10
S RG+ GVF
Sbjct: 527 SAARGAIGVF 536
>sp|PHOSP_MUMPZ|PHOSPHOPROTEIN virus genotype N (strain
Query: 1 SKGRGS 6
SKGRGS
Sbjct: 69 SKGRGS 74
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 SKGRGSRGVF 10
S RG+ GVF
Sbjct: 527 SAARGAIGVF 536
>sp|PHOSP_MUMPE|PHOSPHOPROTEIN virus (strain Enders) (MuV)
Query: 1 SKGRGS 6
SKGRGS
Sbjct: 69 SKGRGS 74
>sp|PHOSP_MUMPM|PHOSPHOPROTEIN virus genotype B (strain
Query: 1 SKGRGS 6
SKGRGS
Sbjct: 69 SKGRGS 74
29|SequenceR|150|141|ITLTFSKGRG
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 1 ITLTFSKGR 9
ITL+FS R
Sbjct: 798 ITLSFSNKR 806
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 1 ITLTFSKGR 9
ITL+FS R
Sbjct: 798 ITLSFSNKR 806
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 ITLTFSKGRG 10
+TL F GRG
Sbjct: 2162 VTLFFLSGRG 2171
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 4 TFSKGR 9
TF+KGR
Sbjct: 398 TFNKGR 403
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 ITLTFSKG 8
+T +FSKG
Sbjct: 1395 VTSSFSKG 1402
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 ITLTFSKG 8
IT+ F KG
Sbjct: 444 ITMEFKKG 451
30|SequenceR|155|146|NTFVTITLTF
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 TFVTITLTF 10
TFVT+T F
Sbjct: 123 TFVTLTKVF 131
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 NTFVTITLTF 10
NTF+ + L+F
Sbjct: 622 NTFIALNLSF 631
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 NTFVTITLTF 10
NTF ++ LTF
Sbjct: 1188 NTFESVCLTF 1197
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 NTFVTITLT 9
+TFV IT+T
Sbjct: 305 STFVPITVT 313
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 NTFVTI 6
NTFVT+
Sbjct: 710 NTFVTL 715
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 NTFVTITLT 9
NT+V IT++
Sbjct: 294 NTYVPITIS 302
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 3 FVTITLTF 10
F T+TL F
Sbjct: 698 FTTLTLNF 705
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 3 FVTITLTF 10
F T+TL F
Sbjct: 698 FTTLTLNF 705
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 TFVTITL 8
+F+T+TL
Sbjct: 944 SFITVTL 950
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 1 NTFVTIT 7
NTF+TIT
Sbjct: 22 NTFLTIT 28
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 4 VTITLTF 10
+T+T+TF
Sbjct: 713 MTVTMTF 719
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 4 VTITLTF 10
+T+T+TF
Sbjct: 713 MTVTMTF 719
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 NTFVTITLT 9
+T+V IT+T
Sbjct: 305 STYVPITIT 313
31|SequenceR|160|151|AVQPPNTFVT
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 AVQPPNTFVT 10
+ +P NTF+T
Sbjct: 2503 SFKPGNTFIT 2512
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 AVQPPNTFVT 10
+ +P NTF+T
Sbjct: 2533 SFKPGNTFIT 2542
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 AVQPPNTFVT 10
+ +P NTF+T
Sbjct: 2533 SFKPGNTFIT 2542
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 AVQPPNTFVT 10
+ +P NTF+T
Sbjct: 2503 SFKPGNTFIT 2512
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 AVQPPNTFVT 10
+ +P NTF+T
Sbjct: 2483 SFKPGNTFIT 2492
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 AVQPPNTFVT 10
+ +P NTF+T
Sbjct: 2483 SFKPGNTFIT 2492
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 QPPNT 7
QPPNT
Sbjct: 602 QPPNT 606
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 QPPNTFVT 10
+P NTF+T
Sbjct: 2447 KPGNTFIT 2454
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 QPPNTFVT 10
+P NTF+T
Sbjct: 2447 KPGNTFIT 2454
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 3 QPPNT 7
QPPNT
Sbjct: 621 QPPNT 625
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 3 QPPNT 7
QPPNT
Sbjct: 621 QPPNT 625
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 3 QPPNT 7
QPPNT
Sbjct: 621 QPPNT 625
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 QPPNTFVT 10
Q PNT+++
Sbjct: 208 QNPNTYIS 215
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 PPNTFVT 10
PPN F T
Sbjct: 507 PPNKFST 513
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 PPNTFVT 10
PPN F T
Sbjct: 507 PPNKFST 513
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 3 QPPNT 7
QPPNT
Sbjct: 616 QPPNT 620
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 QPPNTFVT 10
QPPN +T
Sbjct: 3235 QPPNCSIT 3242
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 QPPNTFVT 10
QPPN +T
Sbjct: 3235 QPPNCSIT 3242
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 3 QPPNTFVT 10
+PP+TF++
Sbjct: 486 EPPSTFLS 493
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 VQPPNTFVT 10
++PP FVT
Sbjct: 4186 LEPPCRFVT 4194
Query: 3 QPPNTFVT 10
QPP T +T
Sbjct: 3228 QPPQTSIT 3235
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 VQPPNTFVT 10
++PP FVT
Sbjct: 4186 LEPPCRFVT 4194
Query: 3 QPPNTFVT 10
QPP T +T
Sbjct: 3228 QPPQTSIT 3235
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 VQPPNTFVT 10
++PP FVT
Sbjct: 4209 LEPPCRFVT 4217
Query: 3 QPPNTFVT 10
QPP T +T
Sbjct: 3251 QPPQTSIT 3258
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 VQPPNTFVT 10
++PP FVT
Sbjct: 4209 LEPPCRFVT 4217
>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)
Query: 5 PNTFVT 10
P+TF+T
Sbjct: 170 PDTFIT 175
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 VQPPNTF 8
++PP+TF
Sbjct: 2054 LRPPSTF 2060
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 VQPPNTF 8
++PP+TF
Sbjct: 2053 LRPPSTF 2059
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 VQPPNTF 8
++PP+TF
Sbjct: 2053 LRPPSTF 2059
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 AVQPPNT 7
A+QPP T
Sbjct: 2359 ALQPPRT 2365
32|SequenceR|165|156|ARHYTAVQPP
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 ARHYTAVQPP 10
RH VQPP
Sbjct: 463 GRHLDTVQPP 472
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 ARHYTAVQPP 10
RH VQPP
Sbjct: 463 GRHLDTVQPP 472
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 ARHYTAVQPP 10
RH VQPP
Sbjct: 463 GRHLDTVQPP 472
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 ARHYTAVQPP 10
RH VQPP
Sbjct: 463 GRHLDTVQPP 472
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 ARHYTAVQPP 10
RH VQPP
Sbjct: 463 GRHLDTVQPP 472
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 ARHYTAVQPP 10
RH VQPP
Sbjct: 463 GRHLDTVQPP 472
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 2 RHYTAVQPP 10
RH VQPP
Sbjct: 845 RHNRIVQPP 853
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 ARHYTAVQPP 10
RH VQPP
Sbjct: 463 GRHLDTVQPP 472
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 4 YTAVQPP 10
YTAV PP
Sbjct: 601 YTAVAPP 607
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 4 YTAVQPP 10
YTAV PP
Sbjct: 601 YTAVAPP 607
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 YTAVQPP 10
YT ++PP
Sbjct: 4206 YTELEPP 4212
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 YTAVQPP 10
YT ++PP
Sbjct: 4183 YTELEPP 4189
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 YTAVQPP 10
YT ++PP
Sbjct: 4206 YTELEPP 4212
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 YTAVQPP 10
YT ++PP
Sbjct: 4183 YTELEPP 4189
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 3 HYTAVQ 8
HY AVQ
Sbjct: 75 HYAAVQ 80
>sp|NP_ADE05|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus C serotype 5
Query: 1 ARHYTAVQPP 10
AR+YT PP
Sbjct: 68 ARNYTPTPPP 77
>sp|NP_ADE02|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus C serotype 2
Query: 1 ARHYTAVQPP 10
AR+YT PP
Sbjct: 68 ARNYTPTPPP 77
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 3 HYTAVQ 8
HY AVQ
Sbjct: 73 HYAAVQ 78
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 RHYTAVQPP 10
RH V PP
Sbjct: 844 RHNRVVHPP 852
>sp|VE5B_HPV6B|PROBABLE protein E5B|Human papillomavirus type 6b
Query: 3 HYTAVQ 8
HY AVQ
Sbjct: 33 HYRAVQ 38
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 ARHYTAVQ 8
A+HYT +
Sbjct: 1097 AQHYTTTE 1104
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 ARHYTAVQ 8
A+HYT +
Sbjct: 1097 AQHYTTTE 1104
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 ARHYTAVQ 8
A+HYT +
Sbjct: 1097 AQHYTTTE 1104
>sp|VL2_HPV28|MINOR capsid protein L2|Human papillomavirus 28
Query: 1 ARHYTAVQP 9
+R YT V P
Sbjct: 377 SRGYTTVSP 385
33|SequenceR|170|161|VTIKIARHYT
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 TIKIARHYT 10
T+K+A H T
Sbjct: 256 TVKLAPHKT 264
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 TIKIARHYT 10
T+K+A H T
Sbjct: 256 TVKLAPHKT 264
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 3 IKIARHYT 10
IKI H+T
Sbjct: 179 IKIVEHHT 186
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 3 IKIARHYT 10
IKI H+T
Sbjct: 179 IKIVEHHT 186
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 3 IKIARHYT 10
IKI H+T
Sbjct: 179 IKIVEHHT 186
34|SequenceR|175|166|ERPGDVTIKI
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ERPGDVTIK 9
+RPG+ T+K
Sbjct: 306 KRPGNKTVK 314
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 ERPGDVTI 8
+RPGD+ I
Sbjct: 104 DRPGDLEI 111
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 ERPGDVTIK 9
+RPG TIK
Sbjct: 431 KRPGTQTIK 439
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 PGDVT 7
PGDVT
Sbjct: 349 PGDVT 353
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 PGDVTIK 9
PG VT+K
Sbjct: 733 PGSVTLK 739
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 PGDVTIK 9
PG VT+K
Sbjct: 733 PGSVTLK 739
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 3 PGDVTIKI 10
PGD +KI
Sbjct: 994 PGDSKLKI 1001
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 ERPGDVTIKI 10
+RPG IK+
Sbjct: 2694 KRPGAFCIKV 2703
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 ERPGDVTIKI 10
+RPG IK+
Sbjct: 2694 KRPGAFCIKV 2703
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 ERPGDVTIKI 10
+RPG IK+
Sbjct: 2690 KRPGAFCIKV 2699
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 2 RPGDVTIK 9
RPG TI+
Sbjct: 390 RPGTATIR 397
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 2 RPGDVTIK 9
RPG TI+
Sbjct: 390 RPGTATIR 397
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 2 RPGDVTIK 9
RPG TI+
Sbjct: 389 RPGTATIR 396
>sp|VP2_POVWU|MINOR capsid protein VP2|WU polyomavirus (WUPyV)
Query: 1 ERPGDV 6
+RPGD+
Sbjct: 98 DRPGDL 103
35|SequenceR|180|171|RHRRPERPGD
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 RRPERPGD 10
R P +PGD
Sbjct: 1960 RNPNKPGD 1967
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 RRPERPGD 10
R P +PGD
Sbjct: 1964 RNPNKPGD 1971
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 RRPERPGD 10
R P +PGD
Sbjct: 1964 RNPNKPGD 1971
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 3 RRPERPG 9
++PE+PG
Sbjct: 258 QKPEKPG 264
>sp|US30_HCMVA|UNCHARACTERIZED protein HHRF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RHRRPERP 8
RHRRP P
Sbjct: 192 RHRRPSTP 199
>sp|US30_HCMVM|UNCHARACTERIZED protein US30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RHRRPERP 8
RHRRP P
Sbjct: 192 RHRRPSTP 199
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 RRPERPG 9
R+P RPG
Sbjct: 3 RKPGRPG 9
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 RRPERPGD 10
R P+R GD
Sbjct: 1933 RNPDRDGD 1940
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 5 PERPGD 10
PE PGD
Sbjct: 51 PEMPGD 56
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 RRPERP 8
R PERP
Sbjct: 719 RGPERP 724
>sp|VL3_HPV5B|PROBABLE protein L3|Human papillomavirus type 5b
Query: 1 RHRRPE 6
RHR PE
Sbjct: 83 RHRWPE 88
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 RHRRPERPG 9
++R P +PG
Sbjct: 927 QYREPVKPG 935
>sp|UL108_HCMVA|UNCHARACTERIZED protein UL108|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HRRPER 7
HRRP R
Sbjct: 2 HRRPRR 7
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 HRRPERPG 9
+++P RPG
Sbjct: 3 NKKPGRPG 10
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 2 HRRPERPG 9
HRR RPG
Sbjct: 7 HRRGSRPG 14
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 RHRRPERPGD 10
RH PE G+
Sbjct: 682 RHAPPETKGE 691
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 4 RPERPGD 10
+P RPGD
Sbjct: 259 KPRRPGD 265
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 4 RPERPGD 10
+P RPGD
Sbjct: 257 KPRRPGD 263
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 RRPERPG 9
++P RPG
Sbjct: 3 KKPGRPG 9
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 1 RHRRPER 7
RHR PER
Sbjct: 549 RHRGPER 555
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 RRPERPGD 10
R P R GD
Sbjct: 1951 RNPNRDGD 1958
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 RRPERPGD 10
R P R GD
Sbjct: 1951 RNPNRDGD 1958
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 RRPERPGD 10
R P R GD
Sbjct: 1951 RNPNRDGD 1958
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 RRPERPGD 10
R P R GD
Sbjct: 1951 RNPNRDGD 1958
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 RRPERPGD 10
R P R GD
Sbjct: 1951 RNPNRDGD 1958
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 RRPERPGD 10
R P R GD
Sbjct: 1951 RNPNRDGD 1958
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 RRPERPGD 10
R P R GD
Sbjct: 1951 RNPNRDGD 1958
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 RRPERPGD 10
R P R GD
Sbjct: 1951 RNPNRDGD 1958
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 RRPERPGD 10
R P R GD
Sbjct: 1951 RNPNRDGD 1958
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 RRPERPGD 10
+RP+ PG+
Sbjct: 1583 QRPDPPGE 1590
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 HRRPE 6
HRRP+
Sbjct: 71 HRRPD 75
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 HRRPE 6
HRRP+
Sbjct: 71 HRRPD 75
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 HRRPE 6
HRRP+
Sbjct: 71 HRRPD 75
36|SequenceR|185|176|DDLKQRHRRP
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 LKQRHRR 9
+KQRH+R
Sbjct: 496 IKQRHQR 502
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 4 KQRHRR 9
+QRHRR
Sbjct: 506 RQRHRR 511
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 4 KQRHRR 9
+QRHRR
Sbjct: 506 RQRHRR 511
>sp|US30_HCMVA|UNCHARACTERIZED protein HHRF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 QRHRRP 10
+RHRRP
Sbjct: 191 ERHRRP 196
>sp|US30_HCMVM|UNCHARACTERIZED protein US30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 QRHRRP 10
+RHRRP
Sbjct: 191 ERHRRP 196
>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 QRHRRP 10
+RHR+P
Sbjct: 75 ERHRQP 80
>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 5 QRHRRP 10
+RHR+P
Sbjct: 75 ERHRQP 80
>sp|REX_HTL3P|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 4 KQRHRRP 10
KQR RRP
Sbjct: 6 KQRSRRP 12
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 6 RHRRP 10
RHR+P
Sbjct: 2733 RHRKP 2737
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 6 RHRRP 10
RHR+P
Sbjct: 2733 RHRKP 2737
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 6 RHRRP 10
RHR+P
Sbjct: 2733 RHRKP 2737
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 6 RHRRP 10
RHR+P
Sbjct: 2733 RHRKP 2737
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 6 RHRRP 10
RHR+P
Sbjct: 2733 RHRKP 2737
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 DDLKQRH 7
DDLKQ H
Sbjct: 388 DDLKQYH 394
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 DDLKQRH 7
DDLKQ H
Sbjct: 388 DDLKQYH 394
>sp|REX_HTL32|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 4 KQRHRRP 10
KQR RRP
Sbjct: 6 KQRSRRP 12
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 1 DDLKQRHRRP 10
DD +RH RP
Sbjct: 362 DDGPRRHERP 371
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 DLKQRHR 8
DLK+ HR
Sbjct: 599 DLKESHR 605
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 DLKQRHR 8
DLK+ HR
Sbjct: 599 DLKESHR 605
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 DLKQRHR 8
DLK+ HR
Sbjct: 599 DLKESHR 605
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 1 DDLKQRH 7
D+L++RH
Sbjct: 741 DELRRRH 747
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 DDLKQRHRR 9
+DL Q+H R
Sbjct: 11 EDLSQQHER 19
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DDLKQR 6
DD+KQR
Sbjct: 675 DDIKQR 680
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DDLKQR 6
DD+KQR
Sbjct: 674 DDIKQR 679
37|SequenceR|190|181|GPKTQDDLKQ
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 GPKTQDD 7
GP T DD
Sbjct: 1973 GPTTTDD 1979
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 GPKTQDD 7
GP ++DD
Sbjct: 1975 GPTSEDD 1981
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PKTQDDLKQ 10
P+T +++KQ
Sbjct: 506 PRTVNEMKQ 514
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PKTQDDLKQ 10
P+T +++KQ
Sbjct: 506 PRTVNEMKQ 514
>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)
Query: 4 TQDDLKQ 10
TQDD+K+
Sbjct: 115 TQDDIKR 121
>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus
Query: 1 GPKTQDDLK 9
GPK+ D K
Sbjct: 384 GPKSNIDFK 392
>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate
Query: 1 GPKTQDDLK 9
GPK+ D K
Sbjct: 384 GPKSNIDFK 392
>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 TQDDLKQ 10
TQDD+K+
Sbjct: 115 TQDDIKR 121
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 1 GPKTQDDLK 9
GPK+ D K
Sbjct: 384 GPKSNIDFK 392
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 1 GPKTQDDLK 9
GPK+ D K
Sbjct: 384 GPKSNIDFK 392
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GPKTQDDLK 9
GPK+ D K
Sbjct: 384 GPKSNIDFK 392
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 1 GPKTQDDLK 9
GPK+ D K
Sbjct: 384 GPKSNIDFK 392
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GPKTQDDLK 9
GPK+ D K
Sbjct: 384 GPKSNIDFK 392
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 1 GPKTQDDLK 9
GPK+ D K
Sbjct: 384 GPKSNIDFK 392
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 4 TQDDLK 9
T+DDLK
Sbjct: 91 TKDDLK 96
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 4 TQDDLK 9
T+DDLK
Sbjct: 91 TKDDLK 96
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 4 TQDDLK 9
T+DDLK
Sbjct: 91 TKDDLK 96
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 4 TQDDLK 9
T+DDLK
Sbjct: 91 TKDDLK 96
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 GPKTQDD 7
GP+ Q+D
Sbjct: 2070 GPENQED 2076
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 4 TQDDLK 9
TQDDL+
Sbjct: 904 TQDDLQ 909
38|SequenceR|195|186|SFSLSGPKTQ
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 SFSLSGPKTQ 10
+F + GPKT+
Sbjct: 920 TFVIDGPKTK 929
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 FSLSGPKTQ 10
F +SGPK +
Sbjct: 215 FHVSGPKAR 223
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 FSLSGPK 8
F +SGPK
Sbjct: 215 FHVSGPK 221
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 FSLSGPKTQ 10
+SL GP+ Q
Sbjct: 2069 YSLVGPEDQ 2077
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 1 SFSLSGPK 8
S+SLS PK
Sbjct: 249 SWSLSDPK 256
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 SFSLSGPKT 9
+ +SGPKT
Sbjct: 2047 TMRISGPKT 2055
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 SFSLSGPKT 9
S L+GP+T
Sbjct: 2049 SMRLAGPRT 2057
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 SFSLSGPKT 9
S L+GP+T
Sbjct: 2049 SMRLAGPRT 2057
39|SequenceR|200|191|ESLRESFSLS
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 ESLRESFSLS 10
E LRE F+LS
Sbjct: 1151 EDLREQFNLS 1160
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 ESLRESFSLS 10
E LRE F+LS
Sbjct: 1151 EDLREQFNLS 1160
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 ESLRESFSLS 10
E LRE F+LS
Sbjct: 1151 EDLREQFNLS 1160
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 3 LRESFSL 9
LRESFS+
Sbjct: 556 LRESFSM 562
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 3 LRESFSL 9
LRE FSL
Sbjct: 451 LREKFSL 457
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ESLRESFSLS 10
+S+R +FSL+
Sbjct: 114 KSMRSNFSLT 123
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 1 ESLRESFSLS 10
+S+R +FSL+
Sbjct: 114 KSMRSNFSLT 123
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 ESLRESFSLS 10
+S+R +FSL+
Sbjct: 114 KSMRSNFSLT 123
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 ESLRESFSLS 10
+S+R +FSL+
Sbjct: 114 KSMRSNFSLT 123
>sp|VGPCR_HHV8P|VIRAL G-protein coupled receptor|Human herpesvirus 8 type P
Query: 1 ESLRESF 7
+SLR+SF
Sbjct: 330 QSLRQSF 336
40|SequenceR|205|196|RLQELESLRE
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 2 LQELESLRE 10
LQEL ++RE
Sbjct: 599 LQELNNVRE 607
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LQELESLRE 10
LQEL ++RE
Sbjct: 599 LQELNNVRE 607
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LQELESLRE 10
L++LE LR+
Sbjct: 546 LEQLEGLRQ 554
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 2 LQELES 7
LQELES
Sbjct: 261 LQELES 266
41|SequenceR|210|201|RMATRRLQEL
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 RMATRRLQEL 10
R+ T+RL+EL
Sbjct: 185 RVPTKRLEEL 194
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 RMATRRLQEL 10
R+ T+RL+EL
Sbjct: 185 RVPTKRLEEL 194
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 RMATRRLQEL 10
R+A RR+ EL
Sbjct: 1667 RLADRRIAEL 1676
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 4 TRRLQEL 10
TR+LQE+
Sbjct: 86 TRKLQEM 92
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 MATRRLQEL 10
+A RR+Q+L
Sbjct: 35 LARRRVQQL 43
42|SequenceR|215|206|HHPSVRMATR
>sp|ORF3D_SARS2|PUTATIVE ORF3d protein|Severe acute respiratory syndrome coronavirus
Query: 1 HHPSVRMAT 9
H+P MAT
Sbjct: 19 HNPQKEMAT 27
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 2 HPSVRM 7
HP++RM
Sbjct: 328 HPTIRM 333
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 HHPSVRMA 8
H PS+R A
Sbjct: 2042 HAPSIRSA 2049
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 1 HHPSVRM 7
H P VRM
Sbjct: 960 HRPGVRM 966
43|SequenceR|220|211|PTPAPHHPSV
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PTPAPHHPSV 10
PT AP H SV
Sbjct: 5945 PTQAPTHLSV 5954
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PTPAPHHPSV 10
PT AP H SV
Sbjct: 5922 PTQAPTHLSV 5931
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 5 PHHPS 9
PHHPS
Sbjct: 1792 PHHPS 1796
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TPAPHHP 8
TPAP HP
Sbjct: 92 TPAPKHP 98
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TPAPHHP 8
TPAP HP
Sbjct: 92 TPAPKHP 98
>sp|X_PAVHV|UNCHARACTERIZED protein X|Human parvovirus B19 (strain HV)
Query: 2 TPAPHHP 8
TP P+HP
Sbjct: 7 TPMPYHP 13
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 4 APHHPSV 10
AP+HP V
Sbjct: 2684 APYHPDV 2690
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 PTPAPHHPS 9
P P H PS
Sbjct: 72 PLPEDHEPS 80
>sp|TRX2_HHV6Z|TRIPLEX capsid protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 PTPAPHH 7
P PA HH
Sbjct: 29 PIPAHHH 35
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 PTPAPHHPS 9
P P H PS
Sbjct: 72 PLPENHEPS 80
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 PTPAPHHPS 9
P P H PS
Sbjct: 72 PLPENHEPS 80
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 PTPAPHHPS 9
P P H PS
Sbjct: 72 PLPENHEPS 80
>sp|TRX2_HHV6U|TRIPLEX capsid protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PTPAPHH 7
P PA HH
Sbjct: 29 PIPAHHH 35
>sp|C_MEASA|PROTEIN C|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 PTPAPHHPS 9
P+P+ H PS
Sbjct: 14 PSPSAHWPS 22
>sp|C_MEASE|PROTEIN C|Measles virus (strain Edmonston) (MeV)
Query: 1 PTPAPHHPS 9
P+P+ H PS
Sbjct: 14 PSPSAHWPS 22
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 PTPAPHHPS 9
P P H PS
Sbjct: 72 PLPENHEPS 80
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 1 PTPAPH 6
P P PH
Sbjct: 461 PCPKPH 466
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 2 TPAPHHPSV 10
TP+PH+ S+
Sbjct: 413 TPSPHYESI 421
>sp|C_MEASI|PROTEIN C|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 PTPAPHHPS 9
P+P+ H PS
Sbjct: 14 PSPSAHWPS 22
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 PTPAP 5
PTPAP
Sbjct: 758 PTPAP 762
>sp|C_MEASC|PROTEIN C|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 PTPAPHHPS 9
P+P+ H PS
Sbjct: 14 PSPSAHWPS 22
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 PTPAPHHPSV 10
P P P H +
Sbjct: 663 PAPIPRHAPI 672
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 PTPAP 5
PTPAP
Sbjct: 758 PTPAP 762
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 1 PTPAPH 6
P P PH
Sbjct: 457 PCPLPH 462
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 PTPAP 5
PTPAP
Sbjct: 759 PTPAP 763
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 5 PHHPSV 10
PH PSV
Sbjct: 172 PHIPSV 177
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 5 PHHPSV 10
PH PSV
Sbjct: 172 PHIPSV 177
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 PTPAP 5
PTPAP
Sbjct: 758 PTPAP 762
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 1 PTPAPH 6
P P PH
Sbjct: 453 PCPLPH 458
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 1 PTPAPH 6
P P PH
Sbjct: 448 PCPLPH 453
>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus
Query: 5 PHHPSV 10
P HPS+
Sbjct: 533 PPHPSI 538
>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate
Query: 5 PHHPSV 10
P HPS+
Sbjct: 533 PPHPSI 538
>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)
Query: 5 PHHPSV 10
P HPS+
Sbjct: 533 PPHPSI 538
>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)
Query: 5 PHHPSV 10
P HPS+
Sbjct: 533 PPHPSI 538
>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 5 PHHPSV 10
P HPS+
Sbjct: 533 PPHPSI 538
>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)
Query: 5 PHHPSV 10
P HPS+
Sbjct: 533 PPHPSI 538
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 PTPAPHHPSV 10
PT + HPSV
Sbjct: 1739 PTKSKLHPSV 1748
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 PTPAPHHPSV 10
P P P H +
Sbjct: 663 PAPIPRHAPI 672
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 PTPAP 5
PTPAP
Sbjct: 758 PTPAP 762
>sp|CXCL1_HCMVM|CHEMOKINE vCXCL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 APHHP 8
+PHHP
Sbjct: 78 SPHHP 82
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 6 HHPS 9
HHPS
Sbjct: 183 HHPS 186
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 6 HHPS 9
HHPS
Sbjct: 183 HHPS 186
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 6 HHPS 9
HHPS
Sbjct: 183 HHPS 186
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 6 HHPS 9
HHPS
Sbjct: 183 HHPS 186
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 6 HHPS 9
HHPS
Sbjct: 200 HHPS 203
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 6 HHPS 9
HHPS
Sbjct: 183 HHPS 186
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 6 HHPS 9
HHPS
Sbjct: 198 HHPS 201
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 6 HHPS 9
HHPS
Sbjct: 199 HHPS 202
>sp|C_MEASY|PROTEIN C|Measles virus (strain Yamagata-1) (MeV)
Query: 1 PTPAPHHPS 9
P+P+ H PS
Sbjct: 14 PSPSAHWPS 22
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 PTPAP 5
PTPAP
Sbjct: 759 PTPAP 763
>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 APHHPSV 10
A HHP +
Sbjct: 93 AKHHPKL 99
>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain
Query: 4 APHHPSV 10
A HHP +
Sbjct: 91 AKHHPKL 97
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 1 PTPAPHHPSV 10
P P H P V
Sbjct: 208 PAPPSHVPEV 217
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 PTPAPHHPSV 10
PT HPSV
Sbjct: 1738 PTKTKLHPSV 1747
>sp|NP04_VZVO|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PTPAPHH 7
PTP PH
Sbjct: 200 PTPTPHQ 206
>sp|NP04_VZVD|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PTPAPHH 7
PTP PH
Sbjct: 200 PTPTPHQ 206
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 TPAPH 6
TPAPH
Sbjct: 394 TPAPH 398
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 3 PAPHHPSV 10
P P+HPS
Sbjct: 90 PKPYHPSA 97
44|SequenceR|225|216|SARPNPTPAP
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 1 SARPNPTPAP 10
S PNP P P
Sbjct: 221 SFAPNPGPRP 230
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 1 SARPNPTPAP 10
S PNP P P
Sbjct: 221 SFAPNPGPRP 230
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 1 SARPNPTPAP 10
S PNP P P
Sbjct: 221 SFAPNPGPRP 230
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 1 SARPNPTPAP 10
S PNP P P
Sbjct: 221 SFAPNPGPRP 230
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 1 SARPNPTPAP 10
S PNP P P
Sbjct: 221 SFAPNPGPRP 230
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 1 SARPNPTPAP 10
S PNP P P
Sbjct: 221 SFAPNPGPRP 230
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 1 SARPNPTPAP 10
S PNP P P
Sbjct: 221 SFAPNPGPRP 230
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 1 SARPNPTPAP 10
S PNP P P
Sbjct: 221 SFAPNPGPRP 230
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 4 PNPTPAP 10
PNP P P
Sbjct: 224 PNPGPRP 230
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 4 PNPTPAP 10
PNP P P
Sbjct: 224 PNPGPRP 230
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 RPNPTPAP 10
RP+ TP+P
Sbjct: 353 RPSRTPSP 360
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 RPNPTPAP 10
RP+ TP+P
Sbjct: 353 RPSRTPSP 360
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 RPNPTPAP 10
RP+ TP+P
Sbjct: 353 RPSRTPSP 360
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 4 PNPTPAP 10
PNPTP P
Sbjct: 2533 PNPTPGP 2539
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 3 RPNPTPAP 10
RP P+PAP
Sbjct: 319 RPTPSPAP 326
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 3 RPNPTPAP 10
RP P+PAP
Sbjct: 450 RPTPSPAP 457
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 RPNPTPAP 10
RP P+PAP
Sbjct: 451 RPTPSPAP 458
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 RPNPTPAP 10
RP P+PAP
Sbjct: 451 RPTPSPAP 458
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 3 RPNPTPAP 10
RP P+PAP
Sbjct: 449 RPTPSPAP 456
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 RPNPTPAP 10
RP P+PAP
Sbjct: 451 RPTPSPAP 458
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 RPNPTPAP 10
RP P+PAP
Sbjct: 451 RPTPSPAP 458
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 3 RPNPTPAP 10
RP P+PAP
Sbjct: 451 RPTPSPAP 458
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 3 RPNPTPAP 10
RP P+PAP
Sbjct: 451 RPTPSPAP 458
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 RPNPTPAP 10
RP P+PAP
Sbjct: 451 RPTPSPAP 458
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SARPNPTP 8
S+ P PTP
Sbjct: 7 SSTPRPTP 14
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin)
Query: 1 SARPNPTP 8
S+ P PTP
Sbjct: 7 SSTPRPTP 14
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 6 PTPAP 10
PTPAP
Sbjct: 758 PTPAP 762
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 SARPNPTPAP 10
+ +P P P P
Sbjct: 764 TTKPKPCPEP 773
Query: 6 PTPAP 10
PTPAP
Sbjct: 758 PTPAP 762
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 SARPNPTPAP 10
+ +P P P P
Sbjct: 765 TTKPKPCPEP 774
Query: 6 PTPAP 10
PTPAP
Sbjct: 759 PTPAP 763
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 SARPNPTPAP 10
+ +P P P P
Sbjct: 764 TTKPKPCPEP 773
Query: 6 PTPAP 10
PTPAP
Sbjct: 758 PTPAP 762
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 6 PTPAP 10
PTPAP
Sbjct: 758 PTPAP 762
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 SARPNPTPAP 10
+ +P P P P
Sbjct: 765 TTKPKPCPEP 774
Query: 6 PTPAP 10
PTPAP
Sbjct: 759 PTPAP 763
>sp|GN_HHV8P|ENVELOPE glycoprotein N|Human herpesvirus 8 type P
Query: 1 SARPNPTP 8
SARP+P P
Sbjct: 43 SARPSPGP 50
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 3 RPNPTPA 9
RPN PA
Sbjct: 317 RPNENPA 323
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SARPNPT 7
S RP PT
Sbjct: 878 SLRPQPT 884
>sp|UL91_HCMVM|PROTEIN UL91|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SARPNPTPAP 10
+ RP P+P P
Sbjct: 81 TCRPCPSPVP 90
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SARPNPT 7
S RP PT
Sbjct: 878 SLRPQPT 884
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SARPNPT 7
S RP PT
Sbjct: 878 SLRPQPT 884
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SARPNPT 7
S RP PT
Sbjct: 878 SLRPQPT 884
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 SARPNPT 7
S RP PT
Sbjct: 878 SLRPQPT 884
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SARPNPT 7
S RP PT
Sbjct: 878 SLRPQPT 884
>sp|UL91_HCMVA|PROTEIN UL91|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SARPNPTPAP 10
+ RP P+P P
Sbjct: 81 TCRPCPSPVP 90
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SARPNPT 7
S RP PT
Sbjct: 878 SLRPQPT 884
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 3 RPNPTPAP 10
RPNP AP
Sbjct: 6 RPNPFGAP 13
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 2 ARPNPTPAP 10
A P P+PAP
Sbjct: 173 AEPCPSPAP 181
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SARPNPT 7
S RP PT
Sbjct: 598 SLRPQPT 604
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 3 RPNPTPAP 10
+P PTP+P
Sbjct: 229 QPRPTPSP 236
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 SARPNPTPAP 10
SA PN P P
Sbjct: 354 SALPNYEPTP 363
45|SequenceR|230|221|TSHNLSARPN
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 HNLSARPN 10
HNL A+P+
Sbjct: 973 HNLGAQPS 980
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 HNLSARPN 10
HNL A+P+
Sbjct: 973 HNLGAQPS 980
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 TSHNLSARP 9
T HN+ +RP
Sbjct: 450 TWHNVLSRP 458
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 TSHNLSARP 9
T HN+ +RP
Sbjct: 450 TWHNVLSRP 458
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 TSHNLSARP 9
T HN+ +RP
Sbjct: 450 TWHNVLSRP 458
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TSHNLSARP 9
T+H ++ RP
Sbjct: 138 TAHKITLRP 146
46|SequenceR|235|226|QPNFATSHNL
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 PNFATSHNL 10
PNFA H L
Sbjct: 2022 PNFARQHEL 2030
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 PNFATSHNL 10
PNFA H+L
Sbjct: 2021 PNFARLHDL 2029
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 NFATSHN 9
NF+ SHN
Sbjct: 3003 NFSVSHN 3009
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 2 PNFATSHNL 10
PNFA H L
Sbjct: 2021 PNFARLHEL 2029
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 NFATSHN 9
NF+ SHN
Sbjct: 3003 NFSVSHN 3009
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 QPNFATSHNL 10
P+F HNL
Sbjct: 6498 HPDFKLLHNL 6507
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 PNFATSHNL 10
P+FA H+L
Sbjct: 2021 PSFARLHDL 2029
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 PNFATSHNL 10
P+FA H+L
Sbjct: 2022 PSFARLHDL 2030
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 QPNFATSHNL 10
+ NF HNL
Sbjct: 2056 EKNFLKQHNL 2065
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 PNFATSHNL 10
P+FA H+L
Sbjct: 2021 PSFARLHDL 2029
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 PNFATSHNL 10
P+FA H+L
Sbjct: 2021 PSFARLHDL 2029
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 PNFATSHNL 10
P+FA H+L
Sbjct: 2021 PSFARLHDL 2029
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 PNFATSHNL 10
P+FA H+L
Sbjct: 2021 PSFARLHDL 2029
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 PNFATSHNL 10
P+FA H+L
Sbjct: 2021 PSFARLHDL 2029
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 PNFATSHNL 10
P+FA H+L
Sbjct: 2021 PSFARLHDL 2029
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PNFATSH 8
PN TSH
Sbjct: 1174 PNITTSH 1180
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 2 PNFATSH 8
PN TSH
Sbjct: 1188 PNITTSH 1194
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 4 FATSHN 9
FA+SHN
Sbjct: 336 FASSHN 341
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 4 FATSHN 9
FA+SHN
Sbjct: 336 FASSHN 341
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 FATSHN 9
FA+SHN
Sbjct: 345 FASSHN 350
47|SequenceR|240|231|MQSQPQPNFA
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 4 QPQPNF 9
QP PNF
Sbjct: 2635 QPSPNF 2640
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 4 QPQPNF 9
QP PNF
Sbjct: 2635 QPSPNF 2640
>sp|YEC4_EBVB9|UNCHARACTERIZED protein EC-RF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 MQSQPQPNFA 10
+ P PNFA
Sbjct: 6 LADAPSPNFA 15
>sp|NSP1A_ROTGI|NON-STRUCTURAL protein 1, peptide 1|Rotavirus B (isolate RVB/Rat/United
Query: 2 QSQPQPNF 9
QS+P PN
Sbjct: 85 QSRPSPNL 92
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 1 MQSQPQPNF 9
++S P PN+
Sbjct: 321 IESNPGPNY 329
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 QSQPQPNFA 10
++ PQ NFA
Sbjct: 1843 ENPPQRNFA 1851
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 QSQPQPNFA 10
++ PQ NFA
Sbjct: 1843 ENPPQRNFA 1851
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 4 QPQPNF 9
QP+P F
Sbjct: 59 QPEPTF 64
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 QSQPQPNFA 10
++ PQ NFA
Sbjct: 1843 ENPPQRNFA 1851
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 1 MQSQPQPNF 9
++S P PN+
Sbjct: 321 IESNPGPNY 329
48|SequenceR|245|236|QRTDQMQSQP
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 3 TDQMQSQP 10
TD+M S+P
Sbjct: 987 TDEMISEP 994
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QRTDQMQSQP 10
+RT QM QP
Sbjct: 754 RRTRQMSQQP 763
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QRTDQMQSQP 10
+RT QM QP
Sbjct: 754 RRTRQMSQQP 763
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QRTDQMQSQP 10
+RT QM QP
Sbjct: 754 RRTRQMSQQP 763
>sp|LHDAG_HDVM2|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 RTDQMQ 7
RTDQM+
Sbjct: 75 RTDQME 80
>sp|LHDAG_HDVS2|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 RTDQMQ 7
RTDQM+
Sbjct: 75 RTDQME 80
>sp|LHDAG_HDVS1|LARGE delta antigen|Hepatitis delta virus genotype II
Query: 2 RTDQMQ 7
RTDQM+
Sbjct: 75 RTDQME 80
>sp|LHDAG_HDVD3|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 RTDQMQ 7
RTDQM+
Sbjct: 75 RTDQME 80
>sp|LHDAG_HDV83|LARGE delta antigen|Hepatitis delta virus genotype II
Query: 2 RTDQMQ 7
RTDQM+
Sbjct: 75 RTDQME 80
>sp|LHDAG_HDVL1|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 RTDQMQ 7
RTDQM+
Sbjct: 75 RTDQME 80
>sp|LHDAG_HDVTW|LARGE delta antigen|Hepatitis delta virus genotype II
Query: 2 RTDQMQ 7
RTDQM+
Sbjct: 75 RTDQME 80
49|SequenceR|250|241|PSPQIQRTDQ
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PSPQIQRTDQ 10
P P+ QRT Q
Sbjct: 2213 PEPEKQRTPQ 2222
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PSPQIQRTDQ 10
P P+ QRT Q
Sbjct: 2213 PEPEKQRTPQ 2222
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PSPQIQRTDQ 10
P P+ QRT Q
Sbjct: 2213 PEPEKQRTPQ 2222
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSPQIQRTDQ 10
P P+ QRT Q
Sbjct: 2214 PEPEKQRTPQ 2223
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PSPQIQRTDQ 10
P P+ QRT Q
Sbjct: 2213 PEPEKQRTPQ 2222
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PSPQIQRTDQ 10
P P+ QRT Q
Sbjct: 2213 PEPEKQRTPQ 2222
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PSPQIQRTDQ 10
P P+ QRT Q
Sbjct: 2213 PEPEKQRTPQ 2222
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSPQIQRTDQ 10
P P+ QRT Q
Sbjct: 2214 PEPEKQRTPQ 2223
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSPQIQRTDQ 10
P P+ QRT Q
Sbjct: 2214 PEPEKQRTPQ 2223
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 PSPQIQRTDQ 10
P P+ QRT Q
Sbjct: 2214 PEPEKQRTPQ 2223
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PSPQIQRTDQ 10
P P+ QRT Q
Sbjct: 2213 PEPEKQRTPQ 2222
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSPQIQRTDQ 10
P P+ QRT Q
Sbjct: 2214 PEPEKQRTPQ 2223
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PSPQIQRTDQ 10
P P+ QRT Q
Sbjct: 2213 PEPEKQRTPQ 2222
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSPQIQRTDQ 10
P P+ QRT Q
Sbjct: 2211 PEPEKQRTPQ 2220
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PSPQIQRTDQ 10
P P+ QRT Q
Sbjct: 2214 PEPEKQRTPQ 2223
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PSPQIQRTDQ 10
P P+ QRT Q
Sbjct: 2213 PEPEKQRTPQ 2222
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PSPQIQRTDQ 10
P P+ QRT Q
Sbjct: 2213 PEPEKQRTPQ 2222
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 PSPQIQRTDQ 10
P P+ QR+ Q
Sbjct: 2236 PEPEKQRSPQ 2245
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 PSPQIQRTDQ 10
P P+ QR+ Q
Sbjct: 2240 PEPEKQRSPQ 2249
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 2 SPQIQRTDQ 10
+PQ Q TDQ
Sbjct: 554 TPQFQLTDQ 562
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 PSPQIQRTDQ 10
P P+ QR+ Q
Sbjct: 2240 PEPEKQRSPQ 2249
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PSPQIQRTDQ 10
P P QRT Q
Sbjct: 2214 PEPDRQRTPQ 2223
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PSPQIQRTDQ 10
P P QRT Q
Sbjct: 2215 PEPDRQRTPQ 2224
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PSPQIQRTDQ 10
P P QRT Q
Sbjct: 2215 PEPDRQRTPQ 2224
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 PSPQIQRTDQ 10
P+P+ QR+ Q
Sbjct: 2242 PNPEKQRSIQ 2251
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 PSPQIQR 7
P+P+IQR
Sbjct: 1772 PAPRIQR 1778
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 PSPQIQRTDQ 10
PSP+ +RT Q
Sbjct: 2322 PSPRRKRTVQ 2331
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 2 SPQIQRTDQ 10
+PQ + TDQ
Sbjct: 556 TPQFELTDQ 564
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PSPQIQRTDQ 10
P+P +RT+Q
Sbjct: 912 PNPADKRTEQ 921
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PSPQIQRTDQ 10
P+P +RT+Q
Sbjct: 912 PNPADKRTEQ 921
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PSPQIQRTDQ 10
P+P +RT+Q
Sbjct: 912 PNPADKRTEQ 921
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 2 SPQIQRTDQ 10
+PQ + TDQ
Sbjct: 556 TPQFELTDQ 564
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 2 SPQIQRTDQ 10
+PQ + TDQ
Sbjct: 554 TPQFELTDQ 562
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 PSPQIQR 7
P+P+IQR
Sbjct: 441 PAPRIQR 447
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 2 SPQIQRTDQ 10
+PQ + TDQ
Sbjct: 554 TPQFELTDQ 562
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 2 SPQIQRTDQ 10
+PQ + TDQ
Sbjct: 555 TPQFELTDQ 563
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 2 SPQIQRTDQ 10
+PQ + TDQ
Sbjct: 554 TPQFELTDQ 562
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 SPQIQRTD 9
SPQI TD
Sbjct: 1093 SPQIITTD 1100
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 3 PQIQRTDQ 10
PQ + TDQ
Sbjct: 560 PQFRLTDQ 567
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 2 SPQIQRTDQ 10
+PQ + TDQ
Sbjct: 552 NPQFKLTDQ 560
50|SequenceR|255|246|DYSWPPSPQI
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 1 DYSWPPSPQI 10
+Y+ PP PQI
Sbjct: 527 NYTLPPHPQI 536
>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus
Query: 2 YSWPPSPQI 10
YS PP P I
Sbjct: 530 YSLPPHPSI 538
>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate
Query: 2 YSWPPSPQI 10
YS PP P I
Sbjct: 530 YSLPPHPSI 538
>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 YSWPPSPQI 10
YS PP P I
Sbjct: 530 YSLPPHPSI 538
>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)
Query: 2 YSWPPSPQI 10
YS PP P I
Sbjct: 530 YSLPPHPSI 538
>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 YSWPPSPQI 10
YS PP P I
Sbjct: 530 YSLPPHPSI 538
>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)
Query: 2 YSWPPSPQI 10
YS PP P I
Sbjct: 530 YSLPPHPSI 538
>sp|UL20_VZVD|PROTEIN UL20 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 SWPPSPQI 10
SW PSP +
Sbjct: 196 SWGPSPAV 203
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 SWPPS 7
SWPPS
Sbjct: 1369 SWPPS 1373
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 SWPPS 7
SWPPS
Sbjct: 1373 SWPPS 1377
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 SWPPS 7
SWPPS
Sbjct: 1373 SWPPS 1377
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 SWPPS 7
SWPPS
Sbjct: 1373 SWPPS 1377
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WPPSPQ 9
W PSPQ
Sbjct: 745 WIPSPQ 750
>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DYSWP 5
DY WP
Sbjct: 403 DYMWP 407
>sp|UL24_HHV2H|PROTEIN UL24|Human herpesvirus 2 (strain HG52)
Query: 2 YSWPPSPQ 9
Y+ PP PQ
Sbjct: 198 YAVPPEPQ 205
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 YSWPPSP 8
Y+W P P
Sbjct: 344 YTWDPDP 350
>sp|M21_HRSVB|PROTEIN M2-1|Human respiratory syncytial virus B
Query: 2 YSWPP 6
+ WPP
Sbjct: 28 FEWPP 32
>sp|M21_HRSVA|PROTEIN M2-1|Human respiratory syncytial virus A
Query: 2 YSWPP 6
+ WPP
Sbjct: 28 FEWPP 32
>sp|M21_HRSV|PROTEIN M2-1|Human respiratory syncytial virus
Query: 2 YSWPP 6
+ WPP
Sbjct: 28 FEWPP 32
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 1 DYSWPPSPQ 9
DYS P+P+
Sbjct: 374 DYSSNPNPK 382
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 DYSWPPS 7
DYS PP+
Sbjct: 216 DYSLPPN 222
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 1 DYSWPPSPQ 9
DYS P+P+
Sbjct: 379 DYSSNPNPK 387
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DYSWPPSPQ 9
+ S PPSPQ
Sbjct: 2651 EASGPPSPQ 2659
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 DYSWPPSPQ 9
+ S PPSPQ
Sbjct: 2629 EASGPPSPQ 2637
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 DYSWPPSPQ 9
+ S PPSPQ
Sbjct: 2624 EASGPPSPQ 2632
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 DYSWPPSPQI 10
D S PP+P I
Sbjct: 94 DASGPPTPDI 103
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 3 SWPPS 7
+WPP+
Sbjct: 13 AWPPN 17
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 5 PPSPQI 10
PPSP++
Sbjct: 98 PPSPEV 103
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 5 PPSPQI 10
PPSP++
Sbjct: 98 PPSPEV 103
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 YSWPPSPQ 9
YS PP P+
Sbjct: 1268 YSLPPDPK 1275
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 DYSWPPSPQ 9
DY +PP Q
Sbjct: 1653 DYFYPPVAQ 1661
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 1 DYSWPPSPQI 10
D+SWP ++
Sbjct: 454 DWSWPDGAEL 463
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 1 DYSWPPSPQI 10
D+SWP ++
Sbjct: 439 DWSWPDGAEL 448
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 1 DYSWPPSPQI 10
D+SWP ++
Sbjct: 454 DWSWPDGAEL 463
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 1 DYSWPPSPQI 10
D+SWP ++
Sbjct: 454 DWSWPDGAEL 463
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 1 DYSWPPSPQI 10
D+SWP ++
Sbjct: 454 DWSWPDGAEL 463
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 1 DYSWPPSPQI 10
D+SWP ++
Sbjct: 438 DWSWPDGAEL 447
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 1 DYSWPPSPQI 10
D+SWP ++
Sbjct: 454 DWSWPDGAEL 463
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 DYSWPPSPQ 9
+YS PSP+
Sbjct: 1770 EYSIEPSPE 1778
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 DYSWPPSPQ 9
+YS PSP+
Sbjct: 1770 EYSIEPSPE 1778
>sp|PRO_ADE40|PROTEASE adenovirus F serotype 40
Query: 3 SWPPSP 8
+WP SP
Sbjct: 135 NWPTSP 140
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 SWPP 6
SWPP
Sbjct: 845 SWPP 848
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 1 DYSWPPSPQI 10
D+SWP ++
Sbjct: 454 DWSWPDDAEL 463
51|SequenceR|260|251|YQYSQDYSWP
>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 SQDYSWP 10
S DY WP
Sbjct: 401 SVDYMWP 407
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 YQYSQDYS 8
+ Y+QDYS
Sbjct: 148 FSYNQDYS 155
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 1 YQYSQDYS 8
+ Y+QDYS
Sbjct: 148 FSYNQDYS 155
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 1 YQYSQDYS 8
+ Y+QDYS
Sbjct: 148 FSYNQDYS 155
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 YQYSQDYS 8
+ Y+QDYS
Sbjct: 148 FSYNQDYS 155
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 YQYSQDYS 8
+ Y+QDYS
Sbjct: 148 FSYNQDYS 155
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 YQYSQDYS 8
Y Y DYS
Sbjct: 1426 YHYDADYS 1433
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 3 YSQDYSW 9
YS +SW
Sbjct: 550 YSMSFSW 556
>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YQYSQDYSW 9
Y +SQ+YS+
Sbjct: 214 YLFSQNYSF 222
>sp|MATRX_ABLVB|MATRIX protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 QYSQDYSW 9
+YSQ+ +W
Sbjct: 147 EYSQEITW 154
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 YQYSQDYSWP 10
YQ S +WP
Sbjct: 157 YQLSPPMTWP 166
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YQYSQD 6
Y+YSQD
Sbjct: 20 YKYSQD 25
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 1 YQYSQD 6
Y+YSQD
Sbjct: 20 YKYSQD 25
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 YQYSQDYSWP 10
YQ S +WP
Sbjct: 157 YQLSPPMTWP 166
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YQYSQD 6
Y+YSQD
Sbjct: 20 YKYSQD 25
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 1 YQYSQD 6
Y+YSQD
Sbjct: 20 YKYSQD 25
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 YQYSQD 6
Y+YSQD
Sbjct: 20 YKYSQD 25
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 YQYSQDYSW 9
Y +SQ+YS+
Sbjct: 215 YLFSQNYSF 223
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 1 YQYSQDYSWP 10
YQ S +WP
Sbjct: 157 YQLSPPMTWP 166
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 YQYSQDYSWP 10
YQ S +WP
Sbjct: 157 YQLSPPITWP 166
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 YQYSQDYSWP 10
YQ S +WP
Sbjct: 157 YQLSPPITWP 166
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YQYSQDYSW 9
Y +SQ+YS+
Sbjct: 215 YLFSQNYSF 223
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 1 YQYSQD 6
Y+YSQD
Sbjct: 20 YKYSQD 25
>sp|TAX_HTL1L|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 YQYSQDYSWP 10
YQ S +WP
Sbjct: 156 YQLSPPITWP 165
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 YQYSQDYSWP 10
YQ S +WP
Sbjct: 157 YQLSPPITWP 166
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 1 YQYSQDYSW 9
+YSQ+ +W
Sbjct: 136 LEYSQEITW 144
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 1 YQYSQDYSW 9
Y +SQ+YS+
Sbjct: 214 YLFSQNYSF 222
>sp|MATRX_RABVP|MATRIX protein|Rabies virus (strain Pasteur vaccins
Query: 1 YQYSQDYSW 9
+YSQ+ +W
Sbjct: 136 LEYSQEITW 144
>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)
Query: 1 YQYSQDYSW 9
+YSQ+ +W
Sbjct: 136 LEYSQEITW 144
>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 YQYSQDYSW 9
+YSQ+ +W
Sbjct: 136 LEYSQEITW 144
>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)
Query: 1 YQYSQDYSW 9
+YSQ+ +W
Sbjct: 136 LEYSQEITW 144
>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 YQYSQDYSW 9
+YSQ+ +W
Sbjct: 136 LEYSQEITW 144
>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 YQYSQDYSW 9
+YSQ+ +W
Sbjct: 136 LEYSQEITW 144
>sp|MATRX_RABVE|MATRIX protein|Rabies virus (strain ERA) (RABV)
Query: 1 YQYSQDYSW 9
+YSQ+ +W
Sbjct: 136 LEYSQEITW 144
>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)
Query: 1 YQYSQDYSW 9
+YSQ+ +W
Sbjct: 136 LEYSQEITW 144
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 6 DYSW 9
DYSW
Sbjct: 137 DYSW 140
>sp|VP2_POVBA|MINOR capsid protein VP2|BK polyomavirus (strain AS) (BKPyV)
Query: 1 YQYSQDY 7
Y Y QDY
Sbjct: 212 YNYIQDY 218
>sp|MATRX_RABVR|MATRIX protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 YQYSQDYSW 9
+YSQ+ +W
Sbjct: 136 LEYSQEITW 144
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 5 QDYSW 9
Q YSW
Sbjct: 354 QQYSW 358
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 YSQDYSW 9
+S+D SW
Sbjct: 394 FSRDASW 400
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 YSQDYSW 9
+S+D SW
Sbjct: 394 FSRDASW 400
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 SQDYSW 9
S DY+W
Sbjct: 1287 SLDYAW 1292
52|SequenceR|265|256|AISGLYQYSQ
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 SGLYQY 8
SGLY+Y
Sbjct: 701 SGLYRY 706
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 AISGLYQYS 9
A+SG QY+
Sbjct: 1525 ALSGFLQYA 1533
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 SGLYQY 8
SGLY+Y
Sbjct: 767 SGLYRY 772
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 SGLYQY 8
SGLY+Y
Sbjct: 767 SGLYRY 772
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 SGLYQY 8
SGLY+Y
Sbjct: 767 SGLYRY 772
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 AISGLYQYS 9
AISG+Y S
Sbjct: 1450 AISGVYPMS 1458
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 2 ISGLYQYS 9
+SG+Y Y+
Sbjct: 273 VSGVYNYA 280
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 AISGLY 6
AISG+Y
Sbjct: 1467 AISGIY 1472
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 AISGLYQYS 9
A+SG+Y S
Sbjct: 1450 AVSGVYPMS 1458
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 AISGLYQYS 9
A+SG+Y S
Sbjct: 1449 AVSGVYPLS 1457
53|SequenceR|270|261|HVSPSAISGL
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 VSPSAISG 9
VSPSAI+G
Sbjct: 614 VSPSAIAG 621
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 VSPSAISG 9
VSP ++SG
Sbjct: 1359 VSPKSVSG 1366
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 1 HVSPSAISGL 10
H++P SGL
Sbjct: 298 HIAPGVGSGL 307
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 2 VSPSAISG 9
V PSA++G
Sbjct: 140 VGPSAVTG 147
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 SPSAISG 9
+PSAISG
Sbjct: 1439 APSAISG 1445
54|SequenceR|275|266|IPTAPHVSPS
>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 IPTAPHVS 8
I TAPH+S
Sbjct: 43 IQTAPHIS 50
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IPTAPHVSPS 10
+PTAP PS
Sbjct: 773 VPTAPVAKPS 782
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IPTAPHVSPS 10
+PTAP PS
Sbjct: 773 VPTAPVAKPS 782
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 4 APHVSP 9
APH++P
Sbjct: 73 APHITP 78
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 4 APHVSP 9
APH++P
Sbjct: 73 APHITP 78
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 1 IPTAPHVSP 9
IP PH SP
Sbjct: 103 IPNEPHYSP 111
Query: 2 PTAPHV 7
PTAPHV
Sbjct: 13 PTAPHV 18
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 1 IPTAPHVSP 9
IP PH SP
Sbjct: 103 IPNEPHYSP 111
Query: 2 PTAPHV 7
PTAPHV
Sbjct: 13 PTAPHV 18
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 1 IPTAPHVSP 9
IP PH SP
Sbjct: 103 IPNEPHYSP 111
Query: 2 PTAPHV 7
PTAPHV
Sbjct: 13 PTAPHV 18
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 PTAPHVSP 9
PT P V+P
Sbjct: 81 PTLPKVTP 88
Query: 4 APHVSPS 10
PH+SP+
Sbjct: 1192 GPHMSPA 1198
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 1 IPTAPHVSP 9
IP PH SP
Sbjct: 103 IPNEPHYSP 111
Query: 2 PTAPHV 7
PTAPHV
Sbjct: 13 PTAPHV 18
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 4 APHVSPS 10
PH+SP+
Sbjct: 1196 GPHMSPA 1202
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 IPTAPHVSP 9
+ PHVSP
Sbjct: 106 VAVEPHVSP 114
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 2 PTAPHV 7
PTAPHV
Sbjct: 13 PTAPHV 18
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 IPTAPH 6
+PT PH
Sbjct: 899 VPTEPH 904
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 PTAPHVSPS 10
PTAP V P+
Sbjct: 456 PTAPPVDPA 464
>sp|GP_PUUMU|ENVELOPE glycoprotein|Puumala virus (strain Udmurtia/894CG/91)
Query: 3 TAPHVSPS 10
T PH+S S
Sbjct: 27 TEPHISAS 34
>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)
Query: 3 TAPHVSPS 10
T PH+S S
Sbjct: 124 TEPHISAS 131
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 IPTAPHVSP 9
+ PHV+P
Sbjct: 106 VAVEPHVNP 114
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 1 IPTAPHVS 8
IP++ HVS
Sbjct: 357 IPSSVHVS 364
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 3 TAPHVSPS 10
T PH+S S
Sbjct: 939 TEPHISTS 946
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 3 TAPHVSPS 10
T PH+S S
Sbjct: 939 TEPHISTS 946
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 TAPHVSPS 10
T PH+S S
Sbjct: 939 TEPHISTS 946
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 IPTAPHVSP 9
+ PHV+P
Sbjct: 106 VAVEPHVNP 114
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 TAPHVSPS 10
TAPH SP
Sbjct: 2216 TAPHDSPG 2223
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 1 IPTAPHVSP 9
PTAP V+P
Sbjct: 410 FPTAPTVTP 418
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 IPTAPHVSP 9
+ PHV+P
Sbjct: 106 VAVEPHVNP 114
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 TAPHVSPS 10
T PH+S S
Sbjct: 939 TEPHISTS 946
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 IPTAPHVSP 9
+ PHV+P
Sbjct: 106 VAVEPHVNP 114
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 PTAPHVSP 9
PTAP V P
Sbjct: 124 PTAPQVLP 131
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 PTAPHVSP 9
PTAP V P
Sbjct: 124 PTAPQVLP 131
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 IPTAPHVSP 9
+ PHV+P
Sbjct: 106 VAIEPHVNP 114
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 PTAPHVSP 9
PTAP V P
Sbjct: 124 PTAPQVLP 131
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 PTAPHVSP 9
PTAP V P
Sbjct: 124 PTAPQVLP 131
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 PTAPHVSP 9
PTAP V P
Sbjct: 124 PTAPQVLP 131
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 PTAPHVSP 9
PTAP V P
Sbjct: 124 PTAPQVLP 131
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 PTAPHVSP 9
PTAP V P
Sbjct: 124 PTAPQVLP 131
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 PTAPHVSP 9
PTAP V P
Sbjct: 124 PTAPQVLP 131
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 PTAPHVSP 9
PTAP V P
Sbjct: 124 PTAPQVLP 131
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 PTAPHVSP 9
PTAP V P
Sbjct: 124 PTAPQVLP 131
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 IPTAPHVSP 9
+ PHV+P
Sbjct: 106 VAIEPHVNP 114
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 IPTAPHVSP 9
+ PHV+P
Sbjct: 106 VAIEPHVNP 114
55|SequenceR|280|271|ARGPSIPTAP
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 2 RGPSIPTAP 10
R PS P+AP
Sbjct: 598 RSPSSPSAP 606
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 2 RGPSIPTAP 10
R PS P+AP
Sbjct: 598 RSPSSPSAP 606
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 2 RGPSIPTAP 10
R PS P+AP
Sbjct: 598 RSPSSPSAP 606
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 4 PSIPTAP 10
PSIP+ P
Sbjct: 276 PSIPSIP 282
Query: 4 PSIPTA 9
PSIP+A
Sbjct: 279 PSIPSA 284
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 2 RGPSIPTAP 10
R PS P+AP
Sbjct: 598 RSPSSPSAP 606
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 2 RGPSIPTAP 10
R PS P+AP
Sbjct: 598 RSPSSPSAP 606
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 RGPSIPT 8
RGPSI T
Sbjct: 1081 RGPSIRT 1087
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 5 SIPTAP 10
SIPT P
Sbjct: 238 SIPTTP 243
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 3 GPSIPTAP 10
GPS PT P
Sbjct: 433 GPSSPTVP 440
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 ARGPSIPT 8
+RGPS+ T
Sbjct: 1068 SRGPSLRT 1075
>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a
Query: 3 GPSIPTAP 10
GP IP AP
Sbjct: 421 GPLIPVAP 428
>sp|VL2_HPV67|MINOR capsid protein L2|Human papillomavirus 67
Query: 1 ARGPSIPTA 9
A PSIPTA
Sbjct: 118 APAPSIPTA 126
>sp|NP03_VZVD|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Dumas)
Query: 4 PSIPTA 9
PS+PTA
Sbjct: 7 PSVPTA 12
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 3 GPSIPTA 9
GPS PTA
Sbjct: 2503 GPSAPTA 2509
>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27
Query: 3 GPSIPTAP 10
GP IP AP
Sbjct: 417 GPLIPVAP 424
>sp|NP03_VZVO|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Oka
Query: 4 PSIPTA 9
PS+PTA
Sbjct: 7 PSVPTA 12
>sp|KBZIP_HHV8P|E3 SUMO-protein ligase K-bZIP|Human herpesvirus 8 type P
Query: 2 RGPSIPTAP 10
RG ++P AP
Sbjct: 172 RGDAVPAAP 180
56|SequenceR|285|276|TTMGSARGPS
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 4 GSARGP 9
GSARGP
Sbjct: 94 GSARGP 99
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 TTMGSARGPS 10
T +GS+ GP+
Sbjct: 457 TPIGSSSGPT 466
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 TTMGSARGPS 10
T+ GSA GPS
Sbjct: 469 TSPGSAAGPS 478
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 TTMGSARGPS 10
T+ GSA GPS
Sbjct: 469 TSPGSAAGPS 478
57|SequenceR|290|281|LEASLTTMGS
>sp|PG191_VACCC|PROTEIN OPG191|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 ASLTTMGS 10
ASLTT+G+
Sbjct: 148 ASLTTIGT 155
>sp|PG191_MONPV|PROTEIN OPG191|Monkeypox virus (MPXV)
Query: 3 ASLTTMGS 10
ASLTT+G+
Sbjct: 151 ASLTTIGT 158
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 ASLTTMGS 10
A LTT+GS
Sbjct: 1247 AQLTTLGS 1254
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 3 ASLTTMG 9
ASLTT G
Sbjct: 2786 ASLTTFG 2792
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 ASLTTMG 9
ASLTT G
Sbjct: 2813 ASLTTFG 2819
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 3 ASLTTMG 9
ASLTT G
Sbjct: 2791 ASLTTFG 2797
58|SequenceR|295|286|SLRSSLEASL
***** No hits found ******
59|SequenceR|300|291|LDPATSLRSS
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LDPATSLRS 9
L P TSLRS
Sbjct: 480 LYPLTSLRS 488
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LDPATSLRS 9
L P TSLRS
Sbjct: 482 LYPLTSLRS 490
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LDPATSLRS 9
L P TSLRS
Sbjct: 487 LYPLTSLRS 495
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LDPATSLRS 9
L P TSLRS
Sbjct: 485 LYPLTSLRS 493
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LDPATSLRS 9
L P TSLRS
Sbjct: 483 LYPLTSLRS 491
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LDPATSLRS 9
L P TSLRS
Sbjct: 483 LYPLTSLRS 491
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 LDPATSLR 8
+DP +SLR
Sbjct: 951 IDPDSSLR 958
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 LDPATSLR 8
+DP +SLR
Sbjct: 951 IDPDSSLR 958
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 LDPATSLR 8
+DP +SLR
Sbjct: 951 IDPDSSLR 958
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 PATSLR 8
PATSLR
Sbjct: 908 PATSLR 913
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 PATSLR 8
PATSLR
Sbjct: 908 PATSLR 913
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 2 DPATSLRS 9
DP T +RS
Sbjct: 414 DPQTGIRS 421
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LDPATSLRS 9
L P TSLRS
Sbjct: 495 LYPLTSLRS 503
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LDPATSLRS 9
L P TSLRS
Sbjct: 495 LYPLTSLRS 503
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 2 DPATSLRS 9
DP T +RS
Sbjct: 414 DPQTGIRS 421
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LDPATSLRS 9
L P TSLRS
Sbjct: 495 LYPLTSLRS 503
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 PATSLRS 9
P TSLRS
Sbjct: 486 PLTSLRS 492
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 PATSLRS 9
P TSLRS
Sbjct: 497 PLTSLRS 503
>sp|GP_PUUMU|ENVELOPE glycoprotein|Puumala virus (strain Udmurtia/894CG/91)
Query: 1 LDPATSLR 8
+DP +SLR
Sbjct: 39 IDPDSSLR 46
>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 PATSLRS 9
P TSLRS
Sbjct: 496 PLTSLRS 502
60|SequenceR|305|296|DSFATLDPAT
>sp|PG122_VAR67|MRNA-DECAPPING protein OPG122|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 SFATLDPAT 10
SF +LDPAT
Sbjct: 105 SFFSLDPAT 113
>sp|PG122_MONPV|MRNA-DECAPPING protein OPG122|Monkeypox virus (MPXV)
Query: 2 SFATLDPAT 10
SF +LDPAT
Sbjct: 105 SFFSLDPAT 113
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 1 DSFATLDPAT 10
D +ATL+P T
Sbjct: 282 DVWATLNPGT 291
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 1 DSFATLDPAT 10
D +ATL+P T
Sbjct: 282 DVWATLNPGT 291
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 1 DSFATLDPAT 10
D +ATL+P T
Sbjct: 282 DVWATLNPGT 291
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 1 DSFATLDPAT 10
D +ATL+P T
Sbjct: 282 DVWATLNPGT 291
>sp|PG170_MONPV|PROTEIN OPG170|Monkeypox virus (MPXV)
Query: 3 FATLDPAT 10
FA+LDP T
Sbjct: 100 FASLDPWT 107
>sp|PG170_VACCC|PROTEIN OPG170|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 FATLDPAT 10
FA+LDP T
Sbjct: 98 FASLDPWT 105
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 3 FATLDPAT 10
FAT DP T
Sbjct: 2091 FATYDPLT 2098
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 3 FATLDPAT 10
FAT DP T
Sbjct: 2091 FATYDPLT 2098
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 TLDPAT 10
TLDP+T
Sbjct: 55 TLDPST 60
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 DSFATLDPAT 10
D F+T D T
Sbjct: 2100 DQFSTFDQET 2109
61|SequenceR|310|301|PFQRPDSFAT
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 1 PFQRPDSF 8
PFQR D F
Sbjct: 271 PFQRGDPF 278
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)
Query: 1 PFQRPDSF 8
PFQR D F
Sbjct: 271 PFQRGDPF 278
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 PFQRPDSFAT 10
PF+ PD T
Sbjct: 381 PFEDPDYVPT 390
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 4 RPDSFA 9
RP+SFA
Sbjct: 434 RPNSFA 439
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 4 RPDSFA 9
RP+SFA
Sbjct: 434 RPNSFA 439
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 4 RPDSFA 9
RP+SFA
Sbjct: 434 RPNSFA 439
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 4 RPDSFA 9
RP+SFA
Sbjct: 434 RPNSFA 439
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 4 RPDSFA 9
RP+SFA
Sbjct: 434 RPNSFA 439
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 4 RPDSFA 9
RP+SFA
Sbjct: 434 RPNSFA 439
>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 4 RPDSFA 9
RP+SFA
Sbjct: 434 RPNSFA 439
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 4 RPDSFA 9
RP+SFA
Sbjct: 434 RPNSFA 439
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 4 RPDSFA 9
RP+SFA
Sbjct: 434 RPNSFA 439
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 4 RPDSFA 9
RP+SFA
Sbjct: 434 RPNSFA 439
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 4 RPDSFA 9
RP+SFA
Sbjct: 434 RPNSFA 439
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 4 RPDSFA 9
RP+SFA
Sbjct: 434 RPNSFA 439
>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)
Query: 4 RPDSFA 9
RP+SFA
Sbjct: 434 RPNSFA 439
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 4 RPDSFA 9
RP+SFA
Sbjct: 434 RPNSFA 439
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 4 RPDSFA 9
RP+SFA
Sbjct: 434 RPNSFA 439
>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169)
Query: 1 PFQRPDSFAT 10
P RP+ +AT
Sbjct: 35 PQCRPEDYAT 44
>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 PFQRPDSFAT 10
P RP+ +AT
Sbjct: 36 PQCRPEDYAT 45
>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62
Query: 2 FQRPDSFAT 10
RP SFAT
Sbjct: 245 VSRPASFAT 253
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 4 RPDSFA 9
RP+SFA
Sbjct: 434 RPNSFA 439
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 4 RPDSFA 9
RP+SFA
Sbjct: 434 RPNSFA 439
62|SequenceR|315|306|ISPLAPFQRP
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 ISPLAPFQRP 10
I+P PF+ P
Sbjct: 376 ITPYNPFEDP 385
>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)
Query: 1 ISPLAPFQR 9
I+PL PF R
Sbjct: 122 ITPLDPFIR 130
>sp|PHOSP_DUVV|PHOSPHOPROTEIN virus (DUVV)
Query: 2 SPLAPFQ 8
+PL+PFQ
Sbjct: 88 NPLSPFQ 94
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ISPLAPFQR 9
I+PL PF R
Sbjct: 122 ITPLDPFIR 130
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 1 ISPLAPFQR 9
I+PL PF R
Sbjct: 122 ITPLDPFIR 130
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ISPLAPFQ 8
I PL P Q
Sbjct: 373 IKPLTPLQ 380
>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58
Query: 1 ISPLAPFQ 8
ISPL PF
Sbjct: 429 ISPLTPFN 436
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 3 PLAPFQRP 10
PLAP P
Sbjct: 351 PLAPIAMP 358
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 ISPLAPFQRP 10
ISP AP RP
Sbjct: 186 ISPGAPRSRP 195
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 2 SPLAPFQRP 10
S +AP RP
Sbjct: 552 SAIAPVSRP 560
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ISPLAPFQRP 10
+SP P +RP
Sbjct: 606 VSPQQPMERP 615
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 2 SPLAPFQR 9
+PL+P++R
Sbjct: 697 TPLSPYER 704
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ISPLAP 6
ISP+AP
Sbjct: 588 ISPIAP 593
>sp|VL2_HPV04|MINOR capsid protein L2|Human papillomavirus 4
Query: 1 ISPLAPFQR 9
+ PL PFQ
Sbjct: 236 LEPLNPFQE 244
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ISPLAP 6
ISP+AP
Sbjct: 590 ISPIAP 595
63|SequenceR|320|311|MRPDSISPLA
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 RPDSISPL 9
RP S+SP+
Sbjct: 19 RPASVSPI 26
Query: 3 PDSISPL 9
PDS SP+
Sbjct: 1824 PDSNSPI 1830
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 MRPDSISPLA 10
+ PD + PLA
Sbjct: 36 LEPDDLGPLA 45
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 MRPDSISPLA 10
+ PD + PLA
Sbjct: 36 LEPDDLGPLA 45
>sp|E310_ADE07|EARLY E3B 10.4 kDa protein|Human adenovirus B serotype 7
Query: 3 PDSISPLA 10
PD I P A
Sbjct: 29 PDCIGPFA 36
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 MRPDSISPLA 10
+ PD + PLA
Sbjct: 36 LEPDDLGPLA 45
>sp|E310_ADE03|EARLY E3B 10.4 kDa protein|Human adenovirus B serotype 3
Query: 3 PDSISPLA 10
PD I P A
Sbjct: 29 PDCIGPFA 36
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 MRPDSIS 7
++PDS+S
Sbjct: 2652 VKPDSVS 2658
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 MRPDSIS 7
++PDS+S
Sbjct: 2652 VKPDSVS 2658
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 PDSISPL 9
PDS SP+
Sbjct: 1826 PDSNSPI 1832
>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PDSISPLA 10
PDS PLA
Sbjct: 273 PDSDFPLA 280
>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)
Query: 3 PDSISPLA 10
PDS PLA
Sbjct: 273 PDSDFPLA 280
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 PDSISPL 9
PDS SP+
Sbjct: 1829 PDSNSPI 1835
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 PDSISPL 9
PDS SP+
Sbjct: 1829 PDSNSPI 1835
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 PDSISPL 9
PDS SP+
Sbjct: 1825 PDSNSPI 1831
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 PDSISPL 9
PDS SP+
Sbjct: 1825 PDSNSPI 1831
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 RPDSISPL 9
RPDS+ L
Sbjct: 337 RPDSLETL 344
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 RPDSISPL 9
+ DSI+PL
Sbjct: 869 KQDSITPL 876
64|SequenceR|325|316|AGPYHMRPDS
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 2 GPYHMRPDS 10
G H+RPDS
Sbjct: 264 GQQHLRPDS 272
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 AGPYHMRPDS 10
AGP+ MRP S
Sbjct: 139 AGPWAMRPLS 148
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 4 YHMRPDS 10
YH+ PDS
Sbjct: 739 YHLLPDS 745
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 4 YHMRPDS 10
YH+ PDS
Sbjct: 739 YHLLPDS 745
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 4 YHMRPDS 10
YH+ PDS
Sbjct: 739 YHLLPDS 745
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 4 YHMRPDS 10
YH+ PDS
Sbjct: 739 YHLLPDS 745
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 4 YHMRPDS 10
YH+ PDS
Sbjct: 739 YHLLPDS 745
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 GPYHMRP 8
GP+H+ P
Sbjct: 1052 GPWHLTP 1058
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 AGPYHMRPDS 10
AGP+ +RP S
Sbjct: 164 AGPWALRPLS 173
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 5 HMRPDS 10
H+RPD+
Sbjct: 649 HIRPDT 654
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 AGPYHM 6
AGP+H+
Sbjct: 1040 AGPWHL 1045
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 AGPYHM 6
AGP+H+
Sbjct: 1040 AGPWHL 1045
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 AGPYHM 6
AGP+H+
Sbjct: 1040 AGPWHL 1045
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 AGPYHM 6
AGP+H+
Sbjct: 1040 AGPWHL 1045
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 AGPYHM 6
AGP+H+
Sbjct: 1040 AGPWHL 1045
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 AGPYHM 6
AGP+H+
Sbjct: 1040 AGPWHL 1045
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 AGPYHM 6
AGP+H+
Sbjct: 1040 AGPWHL 1045
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 AGPYHM 6
AGP+H+
Sbjct: 1039 AGPWHL 1044
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 AGPYHM 6
AGP+H+
Sbjct: 1038 AGPWHL 1043
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 AGPYHM 6
AGP+H+
Sbjct: 1038 AGPWHL 1043
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 AGPYHM 6
AGP+H+
Sbjct: 1038 AGPWHL 1043
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 AGPYHM 6
AGP+H+
Sbjct: 1038 AGPWHL 1043
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 AGPYHM 6
AGP+H+
Sbjct: 1038 AGPWHL 1043
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 AGPYHM 6
AGP+H+
Sbjct: 760 AGPWHL 765
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 GPYHMRPDS 10
G Y++ PDS
Sbjct: 859 GRYNLDPDS 867
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 GPYHMRPDS 10
G Y++ PDS
Sbjct: 855 GRYNLDPDS 863
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 GPYHMRPDS 10
G Y++ PDS
Sbjct: 855 GRYNLDPDS 863
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 2 GPYHMRPDS 10
G H RPDS
Sbjct: 267 GQQHPRPDS 275
>sp|VP6_ROTHG|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United
Query: 1 AGPYHMR 7
GPYH +
Sbjct: 310 GGPYHFQ 316
>sp|VP6_ROTHF|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate
Query: 1 AGPYHMR 7
GPYH +
Sbjct: 310 GGPYHFQ 316
>sp|VP6_ROTHC|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United
Query: 1 AGPYHMR 7
GPYH +
Sbjct: 310 GGPYHFQ 316
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 AGPYHMR 7
AGP H+R
Sbjct: 816 AGPVHLR 822
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 AGPYHMR 7
AGP H+R
Sbjct: 816 AGPVHLR 822
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 AGPYHMR 7
AGP H+R
Sbjct: 816 AGPVHLR 822
>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AGPYHMRPD 9
A P H+ PD
Sbjct: 254 ARPQHVSPD 262
>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AGPYHMRPD 9
A P H+ PD
Sbjct: 254 ARPQHVSPD 262
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 AGPYHMR 7
AGP H+R
Sbjct: 816 AGPVHLR 822
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 AGPYHMR 7
AGP H+R
Sbjct: 816 AGPVHLR 822
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 AGPYHMR 7
AGP H+R
Sbjct: 816 AGPVHLR 822
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 AGPYHMR 7
AGP H+R
Sbjct: 816 AGPVHLR 822
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 AGPYHMR 7
AGP H+R
Sbjct: 816 AGPVHLR 822
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 AGPYHMR 7
AGP H+R
Sbjct: 816 AGPVHLR 822
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 1 AGPYHMRP 8
A P HM P
Sbjct: 433 ASPTHMAP 440
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 AGPYHM 6
A PYH+
Sbjct: 84 ASPYHL 89
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 AGPYHM 6
A PYH+
Sbjct: 84 ASPYHL 89
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 3 PYHM 6
PYHM
Sbjct: 2043 PYHM 2046
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 AGPYHMRP 8
A P HM P
Sbjct: 433 ASPTHMAP 440
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 YHMRPDS 10
+H RPD+
Sbjct: 171 FHNRPDA 177
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 1 AGPYHMRP 8
A P HM P
Sbjct: 425 ASPTHMSP 432
>sp|YL11_ADE41|UNCHARACTERIZED 16.5 kDa protein in|Human adenovirus F serotype 41
Query: 1 AGPYHMRPDS 10
A PYH+ P +
Sbjct: 33 ASPYHVVPTA 42
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 2 GPYHMR 7
GPY MR
Sbjct: 876 GPYSMR 881
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 YHMRPD 9
Y MRPD
Sbjct: 220 YFMRPD 225
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 YHMRPD 9
Y MRPD
Sbjct: 220 YFMRPD 225
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 4 YHMRPDS 10
+H RPD+
Sbjct: 171 FHNRPDA 177
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 2 GPYHMR 7
GPY MR
Sbjct: 876 GPYSMR 881
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 2 GPYHMR 7
GPY MR
Sbjct: 876 GPYSMR 881
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 2 GPYHMR 7
GPY MR
Sbjct: 876 GPYSMR 881
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 2 GPYHMR 7
GPY MR
Sbjct: 881 GPYSMR 886
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 2 GPYHMR 7
GPY MR
Sbjct: 881 GPYSMR 886
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 2 GPYHMRPDS 10
G Y +RPD+
Sbjct: 925 GRYDVRPDA 933
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 AGPYHMR 7
A PYH R
Sbjct: 571 AAPYHSR 577
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PYHMRP 8
P H+RP
Sbjct: 695 PQHVRP 700
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 3 PYHMRP 8
PY++RP
Sbjct: 302 PYNLRP 307
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AGPYHMR 7
A PYH R
Sbjct: 586 AAPYHSR 592
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 2 GPYHMRPDS 10
G Y++ PDS
Sbjct: 273 GVYYITPDS 281
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 3 PYHMRP 8
PY++RP
Sbjct: 302 PYNLRP 307
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 3 PYHMRP 8
PY++RP
Sbjct: 302 PYNLRP 307
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 3 PYHMR 7
PYH+R
Sbjct: 404 PYHLR 408
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 3 PYHMR 7
PYH+R
Sbjct: 406 PYHLR 410
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 YHMRPDS 10
YH +P+S
Sbjct: 817 YHYKPNS 823
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 HMRPDS 10
H RPDS
Sbjct: 137 HRRPDS 142
65|SequenceR|330|321|PSYTFAGPYH
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 SYTFAGPY 9
SY F GPY
Sbjct: 33 SYIFNGPY 40
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 SYTFAGPY 9
SY F GPY
Sbjct: 33 SYIFNGPY 40
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 SYTFAGPY 9
SY F GPY
Sbjct: 33 SYLFNGPY 40
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PSYTFAGPY 9
P YT +GPY
Sbjct: 477 PCYTHSGPY 485
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 SYTFAGPY 9
S FAGPY
Sbjct: 1505 SSGFAGPY 1512
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PSYTFAGPY 9
P YT +GPY
Sbjct: 477 PCYTHSGPY 485
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PSYTFAGPY 9
P YT GPY
Sbjct: 477 PCYTHPGPY 485
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 1 PSYTFAGPY 9
P+Y FAG +
Sbjct: 487 PNYRFAGAF 495
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 1 PSYTFAGPY 9
P+Y FAG +
Sbjct: 487 PNYRFAGAF 495
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 2 SYTFAGPYH 10
SY F YH
Sbjct: 274 SYIFLSSYH 282
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 2 SYTFAGPYH 10
SY F YH
Sbjct: 274 SYIFLSSYH 282
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 2 SYTFAGPYH 10
SY F YH
Sbjct: 274 SYIFLSSYH 282
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 2 SYTFAGPYH 10
SY F YH
Sbjct: 274 SYIFLSSYH 282
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 2 SYTFAGPYH 10
SY F YH
Sbjct: 274 SYIFLSSYH 282
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 3 YTFAGPY 9
Y FAGP+
Sbjct: 413 YQFAGPH 419
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 YTFAGPY 9
Y FAGP+
Sbjct: 413 YQFAGPH 419
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 4 TFAGPY 9
T+AGP+
Sbjct: 240 TYAGPF 245
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2623 YTKGGPGH 2630
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2623 YTKGGPGH 2630
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2619 YTKGGPGH 2626
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2631 YTKGGPGH 2638
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2628 YTKGGPGH 2635
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2623 YTKGGPGH 2630
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2632 YTKGGPGH 2639
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2631 YTKGGPGH 2638
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2590 YTKGGPGH 2597
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2590 YTKGGPGH 2597
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2590 YTKGGPGH 2597
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2590 YTKGGPGH 2597
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2593 YTKGGPGH 2600
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2593 YTKGGPGH 2600
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2593 YTKGGPGH 2600
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2593 YTKGGPGH 2600
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2593 YTKGGPGH 2600
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2596 YTKGGPGH 2603
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2595 YTKGGPGH 2602
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2596 YTKGGPGH 2603
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2627 YTKGGPGH 2634
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2632 YTKGGPGH 2639
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2624 YTKGGPGH 2631
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 YTFAGPYH 10
YT GP H
Sbjct: 2622 YTKGGPGH 2629
>sp|NCAP_SARS2|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 1 PSYTFAGP 8
P TF GP
Sbjct: 13 PRITFGGP 20
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 SYTFAGP 8
SYT GP
Sbjct: 1098 SYTSVGP 1104
>sp|NCAP_SARS|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 1 PSYTFAGP 8
P TF GP
Sbjct: 14 PRITFGGP 21
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 1 PSYTFAGPYH 10
P Y + GP++
Sbjct: 14 PGYKYLGPFN 23
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 1 PSYTFAGPYH 10
P Y + GP++
Sbjct: 14 PGYKYLGPFN 23
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 PSYTFAGPYH 10
P Y + GP++
Sbjct: 14 PGYKYLGPFN 23
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PSYTFA 6
P+YTFA
Sbjct: 2076 PNYTFA 2081
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PSYTFA 6
P+YTFA
Sbjct: 2076 PNYTFA 2081
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PSYTFA 6
P+YTFA
Sbjct: 2076 PNYTFA 2081
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PSYTFA 6
P+YTFA
Sbjct: 2076 PNYTFA 2081
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 1 PSYTFAGPYH 10
P Y + GP++
Sbjct: 14 PGYRYLGPFN 23
66|SequenceR|335|326|STVPTPSYTF
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 4 PTPSYTF 10
P P+YTF
Sbjct: 1156 PLPNYTF 1162
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VPTPSYTF 10
+P P+YTF
Sbjct: 2073 LPAPNYTF 2080
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 VPTPSYTF 10
+P P+YTF
Sbjct: 2073 LPAPNYTF 2080
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 STVPTPSY 8
T+PTPS+
Sbjct: 351 GTIPTPSF 358
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 PTPSYTF 10
P P+YTF
Sbjct: 2074 PAPNYTF 2080
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 PTPSYTF 10
P P+YTF
Sbjct: 2074 PAPNYTF 2080
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 4 PTPSYT 9
PTP YT
Sbjct: 233 PTPGYT 238
Query: 2 TVPTPSY 8
+ PTPS+
Sbjct: 2002 STPTPSF 2008
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 4 PTPSYT 9
PTP YT
Sbjct: 233 PTPGYT 238
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 4 PTPSYT 9
PTP YT
Sbjct: 233 PTPGYT 238
>sp|PHOSP_RABVS|PHOSPHOPROTEIN virus (strain SAD B19)
Query: 2 TVPTPS 7
T PTPS
Sbjct: 157 TTPTPS 162
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 4 PTPSYT 9
PTP YT
Sbjct: 233 PTPGYT 238
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 4 PTPSYT 9
PTP YT
Sbjct: 233 PTPGYT 238
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 PTPSYT 9
PTP YT
Sbjct: 233 PTPGYT 238
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 4 PTPSYT 9
PTP YT
Sbjct: 233 PTPGYT 238
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 4 PTPSYT 9
PTP YT
Sbjct: 233 PTPGYT 238
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PTPSYTF 10
P P+YTF
Sbjct: 269 PLPNYTF 275
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 2 TVPTPSYTF 10
++PTP TF
Sbjct: 425 SIPTPGDTF 433
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 VPTPSYTF 10
+P P+Y F
Sbjct: 2073 IPAPNYKF 2080
>sp|PHOSP_RABVP|PHOSPHOPROTEIN virus (strain Pasteur vaccins
Query: 2 TVPTPS 7
T PTPS
Sbjct: 157 TTPTPS 162
>sp|PHOSP_RABVM|PHOSPHOPROTEIN virus (strain PM) (RABV)
Query: 2 TVPTPS 7
T PTPS
Sbjct: 157 TTPTPS 162
>sp|PHOSP_RABVE|PHOSPHOPROTEIN virus (strain ERA) (RABV)
Query: 2 TVPTPS 7
T PTPS
Sbjct: 157 TTPTPS 162
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 5 TPSYTF 10
TP+YTF
Sbjct: 3348 TPAYTF 3353
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 VPTPSYT 9
+PT SYT
Sbjct: 1711 LPTKSYT 1717
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 TPSYTF 10
TP+YTF
Sbjct: 3348 TPAYTF 3353
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 STVPTPSYT 9
+ +P P YT
Sbjct: 1441 AELPVPEYT 1449
>sp|CORE5_ADE12|CORE-CAPSID bridging protein|Human adenovirus A serotype 12
Query: 1 STVPTPSY 8
S VPTP Y
Sbjct: 284 SIVPTPGY 291
>sp|VP22_VZVO|TEGUMENT protein VP22|Varicella-zoster virus (strain Oka vaccine)
Query: 4 PTPSYT 9
PTPSY
Sbjct: 172 PTPSYN 177
>sp|VP22_VZVD|TEGUMENT protein VP22|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PTPSYT 9
PTPSY
Sbjct: 172 PTPSYN 177
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 5 TPSYTF 10
TP YTF
Sbjct: 3344 TPKYTF 3349
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 5 TPSYTF 10
TP YTF
Sbjct: 3432 TPKYTF 3437
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 5 TPSYTF 10
TP YTF
Sbjct: 3382 TPKYTF 3387
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 5 TPSYTF 10
TP YTF
Sbjct: 3402 TPKYTF 3407
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 TPSYTF 10
TP YTF
Sbjct: 3344 TPKYTF 3349
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 TPSYTF 10
TP YTF
Sbjct: 3382 TPKYTF 3387
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 TPSYTF 10
TP YTF
Sbjct: 3402 TPKYTF 3407
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 TPSYTF 10
TP YTF
Sbjct: 3432 TPKYTF 3437
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 VPTPSYTF 10
+P P+Y F
Sbjct: 2073 LPAPNYKF 2080
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 TVPTPSY 8
+ PTPS+
Sbjct: 2002 STPTPSF 2008
67|SequenceR|340|331|GIGIGSTVPT
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GIGIGSTVP 9
G+G+ TVP
Sbjct: 444 GVGLSDTVP 452
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GIGIGSTVP 9
G+G+ TVP
Sbjct: 444 GVGLSDTVP 452
>sp|YVBC_VACCC|UNCHARACTERIZED 10.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 IGIGSTVP 9
GIGST P
Sbjct: 70 FGIGSTAP 77
>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)
Query: 1 GIGIGSTV 8
G GIGS V
Sbjct: 266 GTGIGSCV 273
>sp|U16_HHV6U|PROTEIN U17/U16|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GIGIGSTV 8
G GIGS V
Sbjct: 266 GTGIGSCV 273
>sp|U16_HHV6G|PROTEIN U17/U16|Human herpesvirus 6A (strain GS)
Query: 1 GIGIGSTV 8
G GIGS V
Sbjct: 266 GTGIGSCV 273
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 IGSTVP 9
IG+TVP
Sbjct: 1099 IGTTVP 1104
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 IGSTVP 9
IG+TVP
Sbjct: 1099 IGTTVP 1104
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 IGSTVP 9
IG+TVP
Sbjct: 1099 IGTTVP 1104
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 IGSTVP 9
IG+TVP
Sbjct: 1099 IGTTVP 1104
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 IGSTVP 9
IG+TVP
Sbjct: 1099 IGTTVP 1104
>sp|VPU_HV190|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 GIGIGSTVPT 10
G+GIG+ V T
Sbjct: 5 GLGIGALVVT 14
>sp|VL2_HPV28|MINOR capsid protein L2|Human papillomavirus 28
Query: 2 IGIGSTVPT 10
I GSTVPT
Sbjct: 114 INSGSTVPT 122
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GIGIGSTVP 9
G G+ ST P
Sbjct: 365 GTGVMSTTP 373
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GIGIGSTVP 9
G G+ ST P
Sbjct: 365 GTGVMSTTP 373
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 4 IGSTVPT 10
+G T+PT
Sbjct: 267 VGDTIPT 273
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 2 IGIGSTVPT 10
I +GST+PT
Sbjct: 226 ILLGSTLPT 234
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 4 IGSTVPT 10
+G T+PT
Sbjct: 267 VGDTIPT 273
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 GIGIGSTVP 9
+G G T+P
Sbjct: 745 AMGFGETIP 753
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 GIGIGSTVP 9
+G G T+P
Sbjct: 747 AMGFGETIP 755
>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10
Query: 2 IGIGSTVPT 10
I GST+PT
Sbjct: 114 INSGSTIPT 122
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 5 GSTVPT 10
G+T+PT
Sbjct: 635 GNTIPT 640
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 4 IGSTVPT 10
+G TVPT
Sbjct: 294 MGDTVPT 300
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 2 IGIGSTVPT 10
I GST+PT
Sbjct: 114 INSGSTIPT 122
>sp|VL2_HPV03|MINOR capsid protein L2|Human papillomavirus 3
Query: 2 IGIGSTVPT 10
I GST+PT
Sbjct: 114 INSGSTIPT 122
68|SequenceR|345|336|GMASMGIGIG
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 MASMGIGI 9
MASMG+G+
Sbjct: 486 MASMGLGV 493
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 MASMGIGI 9
MASMG+G+
Sbjct: 486 MASMGLGV 493
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 MASMGIGI 9
MASMG+G+
Sbjct: 486 MASMGLGV 493
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 ASMGIGIG 10
A MGIG+G
Sbjct: 243 AGMGIGVG 250
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 ASMGIGIG 10
A MG+G+G
Sbjct: 242 AGMGVGVG 249
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 ASMGIGIG 10
A MG+G+G
Sbjct: 242 AGMGVGVG 249
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 ASMGIGIG 10
A MG+G+G
Sbjct: 243 AGMGVGVG 250
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 ASMGIGIG 10
A MG+G+G
Sbjct: 242 AGMGVGVG 249
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 ASMGIGIG 10
A MG+G+G
Sbjct: 242 AGMGVGVG 249
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 ASMGIGIG 10
A MG+G+G
Sbjct: 242 AGMGVGVG 249
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 ASMGIGIG 10
A MG+G+G
Sbjct: 242 AGMGVGVG 249
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 ASMGIGIG 10
A MG+G+G
Sbjct: 244 AGMGVGVG 251
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 ASMGIGIG 10
A MG+G+G
Sbjct: 244 AGMGVGVG 251
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 ASMGIGIG 10
A MG+G+G
Sbjct: 245 AGMGVGVG 252
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 ASMGIGIG 10
A MG+G+G
Sbjct: 244 AGMGVGVG 251
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 ASMGIGIG 10
A MG+G+G
Sbjct: 242 AGMGVGVG 249
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 MASMGIGIG 10
+A +GIG+G
Sbjct: 385 IADIGIGVG 393
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 3 ASMGIGIG 10
A++G+G+G
Sbjct: 449 ATLGVGVG 456
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 3 ASMGIGIG 10
A++G+G+G
Sbjct: 450 ATLGVGVG 457
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 GMASMGIGI 9
G+A+M IGI
Sbjct: 1470 GIANMTIGI 1478
>sp|GN_HHV11|ENVELOPE glycoprotein N|Human herpesvirus 1 (strain 17)
Query: 1 GMASMGIGI 9
GMASMG+ I
Sbjct: 66 GMASMGVCI 74
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 5 MGIGIG 10
MG+G+G
Sbjct: 1858 MGVGVG 1863
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 5 MGIGIG 10
MG+G+G
Sbjct: 1878 MGVGVG 1883
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 5 MGIGIG 10
MG+G+G
Sbjct: 1908 MGVGVG 1913
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 MGIGIG 10
MG+G+G
Sbjct: 1858 MGVGVG 1863
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 MGIGIG 10
MG+G+G
Sbjct: 1878 MGVGVG 1883
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 MGIGIG 10
MG+G+G
Sbjct: 1908 MGVGVG 1913
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 4 SMGIGI 9
SMGIG+
Sbjct: 498 SMGIGV 503
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 GMASMGIGI 9
GM S+ +GI
Sbjct: 619 GMLSIALGI 627
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 GMASMGIGI 9
GM S+ +GI
Sbjct: 619 GMLSIALGI 627
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 MASMGIGI 9
+ SMGIG+
Sbjct: 866 LRSMGIGM 873
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 MASMGIGI 9
+ SMGIG+
Sbjct: 868 LRSMGIGM 875
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 5 MGIGIG 10
+GIGIG
Sbjct: 479 VGIGIG 484
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 5 MGIGIG 10
+GIGIG
Sbjct: 479 VGIGIG 484
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 MASMGIGI 9
+ SMGIG+
Sbjct: 861 LRSMGIGM 868
>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 MASMGIGI 9
+AS+G+GI
Sbjct: 290 LASLGLGI 297
>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)
Query: 2 MASMGIGI 9
+AS+G+GI
Sbjct: 290 LASLGLGI 297
>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann
Query: 2 MASMGIGI 9
+AS+G+GI
Sbjct: 290 LASLGLGI 297
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 MASMGIGI 9
+AS+G+GI
Sbjct: 290 LASLGLGI 297
>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)
Query: 2 MASMGIGI 9
+AS+G+GI
Sbjct: 290 LASLGLGI 297
69|SequenceR|350|341|YRTASGMASM
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 YRTASGM 7
YR ASG+
Sbjct: 194 YRNASGL 200
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 YRTASGM 7
YR ASG+
Sbjct: 194 YRNASGL 200
70|SequenceR|355|346|PLYTHYRTAS
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 PLYTHY 6
P+Y HY
Sbjct: 199 PMYVHY 204
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LYTHYRTAS 10
YTHYR+ +
Sbjct: 242 FYTHYRSVN 250
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LYTHYRTAS 10
YTHYR+ +
Sbjct: 242 FYTHYRSVN 250
>sp|VPR_HV1MV|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 2 LYTHYRTA 9
L+THYR
Sbjct: 68 LFTHYRIG 75
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 LYTHYRT 8
+Y HYR+
Sbjct: 709 IYKHYRS 715
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 LYTHYRT 8
+Y HYR+
Sbjct: 710 VYKHYRS 716
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 LYTHYRT 8
+Y HYR+
Sbjct: 709 VYKHYRS 715
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 2 LYTHYRT 8
+Y HYR+
Sbjct: 709 VYKHYRS 715
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 LYTHYRT 8
+Y HYR+
Sbjct: 710 VYKHYRS 716
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 LYTHYRT 8
+Y HYR+
Sbjct: 710 VYKHYRS 716
>sp|VPR_HV1AN|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 2 LYTHYR 7
L+THYR
Sbjct: 68 LFTHYR 73
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 LYTHYRT 8
+Y HYR+
Sbjct: 709 VYKHYRS 715
>sp|VPR_HV2CA|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 2 LYTHYRTA 9
L+TH+R
Sbjct: 73 LFTHFRAG 80
>sp|VPR_HV2SB|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 2 LYTHYRTA 9
L+TH+R
Sbjct: 73 LFTHFRAG 80
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 LYTHYR 7
L THYR
Sbjct: 274 LNTHYR 279
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 3 YTHYRT 8
Y H+RT
Sbjct: 206 YAHHRT 211
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 3 YTHYRT 8
Y H+RT
Sbjct: 206 YAHHRT 211
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 2 LYTHYRTA 9
L+TH R A
Sbjct: 619 LFTHIRQA 626
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 3 YTHYR 7
YTHY+
Sbjct: 670 YTHYK 674
>sp|VPR_HV2RO|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 2 LYTHYRTA 9
L+TH+R
Sbjct: 73 LFTHFRAG 80
71|SequenceR|360|351|GPYPPPLYTH
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 3 YPPPLY 8
YPPP Y
Sbjct: 591 YPPPRY 596
>sp|TRX2_HHV6Z|TRIPLEX capsid protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 GPYP----------PPLYTH 10
GP+P PPL TH
Sbjct: 94 GPFPWEKGDTLTLIPPLSTH 113
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 3 YPPPLY 8
YPPP Y
Sbjct: 590 YPPPRY 595
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 YPPPLY 8
YPPP Y
Sbjct: 590 YPPPRY 595
>sp|TRX2_HHV6U|TRIPLEX capsid protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GPYP----------PPLYTH 10
GP+P PPL TH
Sbjct: 94 GPFPWEKGDTLTLIPPLSTH 113
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 4 PPPLYTH 10
PPPL++H
Sbjct: 515 PPPLWSH 521
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 4 PPPLYTH 10
PPPLYT
Sbjct: 559 PPPLYTQ 565
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 YPPPLY 8
YPPP Y
Sbjct: 591 YPPPRY 596
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 YPPPLY 8
YPPP Y
Sbjct: 591 YPPPRY 596
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 4 PPPLYTH 10
PPPL++H
Sbjct: 500 PPPLWSH 506
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 4 PPPLYTH 10
PPPL++H
Sbjct: 498 PPPLWSH 504
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 4 PPPLYTH 10
PPPL+ H
Sbjct: 531 PPPLWGH 537
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 4 PPPLYTH 10
PPPL+ H
Sbjct: 531 PPPLWGH 537
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 PYPPPL 7
P PPP+
Sbjct: 1483 PSPPPM 1488
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PYPPPL 7
P PPP+
Sbjct: 1483 PSPPPM 1488
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PYPPPL 7
P PPP+
Sbjct: 1483 PSPPPM 1488
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PYPPPL 7
P PPPL
Sbjct: 951 PLPPPL 956
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 2 PYPPPL 7
P PPPL
Sbjct: 951 PLPPPL 956
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PYPPPL 7
P PPP+
Sbjct: 1483 PSPPPV 1488
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 4 PPPLYTH 10
PPPLY
Sbjct: 559 PPPLYAQ 565
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPYPP 5
GP+PP
Sbjct: 221 GPFPP 225
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PYPPPL 7
P PPP+
Sbjct: 1483 PSPPPV 1488
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PYPPPL 7
P PPP+
Sbjct: 1483 PSPPPV 1488
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PYPPPL 7
P PPP+
Sbjct: 1483 PSPPPV 1488
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 4 PPPLYTH 10
PPPLY
Sbjct: 559 PPPLYAQ 565
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 4 PPPLYTH 10
PPPLY
Sbjct: 559 PPPLYAQ 565
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 4 PPPLYTH 10
PPPLY
Sbjct: 559 PPPLYAQ 565
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 YPPPLYT 9
YP PLY+
Sbjct: 2004 YPKPLYS 2010
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PYPPPL 7
P PPP+
Sbjct: 1073 PSPPPV 1078
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPYPP 5
GP+PP
Sbjct: 221 GPFPP 225
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 PYPPPLY 8
P+P P+Y
Sbjct: 428 PFPGPIY 434
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 YPPPLYT 9
YP P+Y+
Sbjct: 2005 YPAPIYS 2011
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 2 PYPPPLY 8
P+P P+Y
Sbjct: 428 PFPGPIY 434
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 2 PYPPPLY 8
P PPLY
Sbjct: 30 PAAPPLY 36
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 2 PYPPPLY 8
P PPLY
Sbjct: 30 PAAPPLY 36
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 YPPPLYT 9
YP P+Y+
Sbjct: 2004 YPAPVYS 2010
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 YPPPLYT 9
YP P+Y+
Sbjct: 2004 YPAPVYS 2010
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 5 PPLYT 9
PP+YT
Sbjct: 447 PPVYT 451
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 2 PYPPPLY 8
P P PLY
Sbjct: 140 PRPVPLY 146
>sp|VC18_VACCC|ANKYRIN repeat protein C18/B24|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 YPPPLY 8
YP PL+
Sbjct: 118 YPEPLF 123
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 2 PYPPP 6
PY PP
Sbjct: 480 PYSPP 484
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 YPPPLYT 9
YP P+Y+
Sbjct: 1965 YPAPVYS 1971
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 YPPPLYT 9
YP P+Y+
Sbjct: 1965 YPAPVYS 1971
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PYPPP 6
PY PP
Sbjct: 480 PYSPP 484
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 YPPPLY 8
YP P+Y
Sbjct: 1988 YPAPMY 1993
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 YPPPLYT 9
YP P+Y+
Sbjct: 1902 YPVPIYS 1908
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 1 GPYPPPLYT 9
G YP LY+
Sbjct: 937 GYYPEELYS 945
>sp|VE5A_HPV6A|PROBABLE protein E5A|Human papillomavirus type 6a
Query: 3 YPPPLYTH 10
Y P LY H
Sbjct: 76 YCPALYIH 83
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 YPPPLYT 9
YP P+Y+
Sbjct: 1961 YPVPIYS 1967
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 YPPPLYT 9
YP P+Y+
Sbjct: 1968 YPVPIYS 1974
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 YPPPLYT 9
YP P+Y+
Sbjct: 1971 YPRPVYS 1977
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 PYPPPLYT 9
P PP YT
Sbjct: 396 PVPPNAYT 403
>sp|PG087_VACCC|LATE transcription elongation factor OPG087|Vaccinia virus (strain
Query: 3 YPPPLYTH 10
Y P +YT+
Sbjct: 128 YTPQIYTY 135
>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)
Query: 3 YPPPLYTH 10
YP +Y H
Sbjct: 437 YPDAVYLH 444
>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)
Query: 3 YPPPLYTH 10
YP +Y H
Sbjct: 437 YPDAVYLH 444
>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)
Query: 3 YPPPLYTH 10
YP +Y H
Sbjct: 437 YPDAVYLH 444
>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)
Query: 3 YPPPLYTH 10
YP +Y H
Sbjct: 437 YPDAVYLH 444
>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)
Query: 3 YPPPLYTH 10
YP +Y H
Sbjct: 437 YPDAVYLH 444
>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)
Query: 3 YPPPLYTH 10
YP +Y H
Sbjct: 437 YPDAVYLH 444
>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)
Query: 3 YPPPLYTH 10
YP +Y H
Sbjct: 437 YPDAVYLH 444
>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 YPPPLYTH 10
YP +Y H
Sbjct: 437 YPDAVYLH 444
>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 YPPPLYTH 10
YP +Y H
Sbjct: 437 YPDAVYLH 444
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 PYPPPLYTH 10
P PPP YT
Sbjct: 2078 PCPPPNYTR 2086
>sp|VE5A_HPV6B|PROBABLE protein E5A|Human papillomavirus type 6b
Query: 3 YPPPLYTH 10
Y P LY H
Sbjct: 76 YCPALYIH 83
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 PYPPP 6
P PPP
Sbjct: 1744 PIPPP 1748
Query: 3 YPPPLYT 9
YP P+Y+
Sbjct: 1920 YPRPVYS 1926
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 PYPPPLYT 9
P PP YT
Sbjct: 398 PVPPNAYT 405
>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus
Query: 1 GPYPPP 6
PY PP
Sbjct: 23 APYTPP 28
>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate
Query: 1 GPYPPP 6
PY PP
Sbjct: 23 APYTPP 28
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 YPPPLYT 9
YP P+Y+
Sbjct: 1958 YPRPVYS 1964
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 YPPPLYT 9
YP P+Y+
Sbjct: 1958 YPRPVYS 1964
>sp|PG087_MONPV|LATE transcription elongation factor OPG087|Monkeypox virus (MPXV)
Query: 3 YPPPLYTH 10
Y P +YT+
Sbjct: 128 YTPQIYTY 135
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 GPYPPPLYT 9
GP PPP +T
Sbjct: 149 GPPPPPRFT 157
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PYPPPL 7
PYP P+
Sbjct: 384 PYPNPM 389
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 YPPPLYT 9
YP P+Y+
Sbjct: 1965 YPVPVYS 1971
>sp|PG087_VARV|LATE transcription elongation factor OPG087|Variola virus
Query: 3 YPPPLYTH 10
Y P +YT+
Sbjct: 128 YTPQIYTY 135
>sp|PG087_VAR67|LATE transcription elongation factor OPG087|Variola virus (isolate
Query: 3 YPPPLYTH 10
Y P +YT+
Sbjct: 128 YTPQIYTY 135
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 GPYPPP 6
P PPP
Sbjct: 1764 APIPPP 1769
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 3 YPPPLYT 9
YP P+Y+
Sbjct: 640 YPRPVYS 646
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 4 PPPLYTH 10
P P+ TH
Sbjct: 190 PKPIVTH 196
72|SequenceR|365|356|QAQSSGPYPP
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QSSGPYPP 10
Q +GP+PP
Sbjct: 218 QQAGPFPP 225
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 QSSGPYPP 10
Q +GP+PP
Sbjct: 218 QQAGPFPP 225
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 2 AQSSGPYP 9
A S GPYP
Sbjct: 285 AFSHGPYP 292
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 2 AQSSGPYP 9
A S GPYP
Sbjct: 286 AFSHGPYP 293
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 QAQSSGPY 8
+ QSSGP+
Sbjct: 1049 KVQSSGPW 1056
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 2 AQSSGPYP 9
A S GPYP
Sbjct: 286 AFSHGPYP 293
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QSSGPYPP 10
Q +GP PP
Sbjct: 217 QQAGPIPP 224
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 QAQSSGPYPP 10
Q GPY P
Sbjct: 295 QGSIQGPYLP 304
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 4 SSGPYP 9
S GPYP
Sbjct: 286 SYGPYP 291
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 2 AQSSGPYP 9
A + GPYP
Sbjct: 283 AFTYGPYP 290
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 4 SSGPYP 9
+ GPYP
Sbjct: 287 THGPYP 292
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 QSSGPYPP 10
Q +GP PP
Sbjct: 217 QQAGPIPP 224
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 2 AQSSGPYPP 10
AQS+G PP
Sbjct: 176 AQSNGDCPP 184
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 6 GPYP 9
GPYP
Sbjct: 288 GPYP 291
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 6 GPYP 9
GPYP
Sbjct: 289 GPYP 292
73|SequenceR|370|361|QFPGGQAQSS
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 FPGGQAQSS 10
FPGGQ Q +
Sbjct: 267 FPGGQTQGA 275
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 3 PGGQAQS 9
PGG AQS
Sbjct: 170 PGGYAQS 176
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 3 PGGQAQS 9
PGG AQS
Sbjct: 170 PGGYAQS 176
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 3 PGGQAQS 9
PGG AQS
Sbjct: 171 PGGYAQS 177
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 3 PGGQAQS 9
PGG AQS
Sbjct: 170 PGGYAQS 176
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 3 PGGQAQS 9
PGG AQS
Sbjct: 171 PGGYAQS 177
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 3 PGGQAQS 9
PGG AQS
Sbjct: 170 PGGYAQS 176
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 3 PGGQAQSS 10
PGGQA S+
Sbjct: 207 PGGQADSN 214
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 3 PGGQAQSS 10
PGGQA S+
Sbjct: 207 PGGQADSN 214
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 3 PGGQAQSS 10
PGGQA S+
Sbjct: 207 PGGQADSN 214
>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933
Query: 3 PGGQAQS 9
PGG+A++
Sbjct: 246 PGGEARN 252
74|SequenceR|375|366|SPSSAQFPGG
>sp|B9_HHV6Z|PROTEIN B9|Human herpesvirus 6B (strain Z29)
Query: 2 PSSAQFPGG 10
PS+AQ PG
Sbjct: 78 PSAAQLPGA 86
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 1 SPSSAQFPGG 10
PSS FP G
Sbjct: 21 CPSSCSFPAG 30
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PSSAQFPGG 10
PS+ Q P G
Sbjct: 221 PSTMQLPEG 229
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 SPSSAQFPGG 10
+PS A PGG
Sbjct: 1121 TPSHADPPGG 1130
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 SPSSAQFPGG 10
+PS A PGG
Sbjct: 1121 TPSHADPPGG 1130
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 SPSSAQFPGG 10
+PS A PGG
Sbjct: 1121 TPSPADPPGG 1130
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 SPSSAQFPGG 10
+PS A PGG
Sbjct: 1121 TPSPADPPGG 1130
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 SPSSAQFPGG 10
+PS A PGG
Sbjct: 1126 TPSHADPPGG 1135
>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29
Query: 2 PSSAQFP 8
PSSAQ+P
Sbjct: 418 PSSAQWP 424
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 SPSSAQFPGG 10
+PS A PGG
Sbjct: 1126 TPSHADPPGG 1135
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 2 PSSAQFP 8
P+S QFP
Sbjct: 121 PASFQFP 127
>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10
Query: 2 PSSAQFP 8
P+SAQ+P
Sbjct: 415 PTSAQWP 421
>sp|UNG_HHV23|URACIL-DNA glycosylase|Human herpesvirus 2 (strain 333)
Query: 2 PSSAQFPGG 10
P S FPGG
Sbjct: 50 PESRCFPGG 58
75|SequenceR|380|371|YYLHYSPSSA
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 YYLHYSPSSA 10
YYL P+SA
Sbjct: 735 YYLRTKPASA 744
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 1 YYLHYSPSSA 10
YYL P+SA
Sbjct: 735 YYLRTKPASA 744
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 1 YYLHYSPSSA 10
YYL P+SA
Sbjct: 735 YYLRTKPASA 744
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YYLHYSPSSA 10
YYL P+SA
Sbjct: 735 YYLRTKPASA 744
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YYLHYSPSSA 10
YYL P+SA
Sbjct: 735 YYLRTKPASA 744
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 YLHYSPS 8
Y HY+PS
Sbjct: 1972 YKHYTPS 1978
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 YYLHY 5
YY+HY
Sbjct: 241 YYIHY 245
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 YYLHY 5
YY+HY
Sbjct: 241 YYIHY 245
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 YYLHY 5
YY+HY
Sbjct: 242 YYIHY 246
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 1 YYLHYSP 7
+Y HY+P
Sbjct: 647 FYCHYTP 653
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 YLHYSPS 8
Y HY+PS
Sbjct: 1972 YKHYTPS 1978
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 YYLHY 5
YY+HY
Sbjct: 241 YYIHY 245
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 4 HYSPS 8
HYSPS
Sbjct: 89 HYSPS 93
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 4 HYSPS 8
HYSPS
Sbjct: 89 HYSPS 93
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YYLHYSP 7
YYL Y P
Sbjct: 280 YYLAYGP 286
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YYLHYSP 7
YYL Y P
Sbjct: 280 YYLAYGP 286
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 YYLHY 5
YY+HY
Sbjct: 241 YYIHY 245
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 YYLHY 5
YY+HY
Sbjct: 242 YYIHY 246
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 YYLHY 5
YY+HY
Sbjct: 241 YYIHY 245
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 YYLHY 5
YY+HY
Sbjct: 241 YYIHY 245
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 HYSPSSA 10
HY PSS+
Sbjct: 38 HYCPSSS 44
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 HYSPSSA 10
HY PSS+
Sbjct: 38 HYCPSSS 44
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 HYSPSSA 10
HY PSS+
Sbjct: 38 HYCPSSS 44
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 HYSPSSA 10
HY PSS+
Sbjct: 38 HYCPSSS 44
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 4 HYSPSSA 10
HY PSS+
Sbjct: 38 HYCPSSS 44
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 HYSPSSA 10
HY PSS+
Sbjct: 38 HYCPSSS 44
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 HYSPSSA 10
HY PSS+
Sbjct: 38 HYCPSSS 44
>sp|VP22_HHV11|TEGUMENT protein VP22|Human herpesvirus 1 (strain 17)
Query: 3 LHYSPSSA 10
L+Y+PSS
Sbjct: 22 LYYTPSSG 29
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 YYLHYSPS 8
YY H+S S
Sbjct: 434 YYTHWSGS 441
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 YYLHYSPS 8
YY H+S S
Sbjct: 434 YYTHWSGS 441
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 YYLHYSPS 8
YY H+S S
Sbjct: 424 YYTHWSGS 431
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 YYLHYSPS 8
YY H+S S
Sbjct: 438 YYTHWSGS 445
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 YYLHYSPS 8
YY H+S S
Sbjct: 436 YYTHWSGS 443
76|SequenceR|385|376|GASAGYYLHY
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GASAGYYLH 9
GAS G+ LH
Sbjct: 316 GASGGFLLH 324
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GASAGYYLH 9
GAS G+ LH
Sbjct: 316 GASGGFLLH 324
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 3 SAGYYLH 9
S GY+LH
Sbjct: 491 SMGYFLH 497
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 6 YYLHY 10
YY+HY
Sbjct: 242 YYIHY 246
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 6 YYLHY 10
YY+HY
Sbjct: 241 YYIHY 245
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 6 YYLHY 10
YY+HY
Sbjct: 241 YYIHY 245
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 6 YYLHY 10
YY+HY
Sbjct: 241 YYIHY 245
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 6 YYLHY 10
YY+HY
Sbjct: 242 YYIHY 246
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 6 YYLHY 10
YY+HY
Sbjct: 241 YYIHY 245
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 6 YYLHY 10
YY+HY
Sbjct: 241 YYIHY 245
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 6 YYLHY 10
YY+HY
Sbjct: 241 YYIHY 245
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GASAGYYLH 9
GA+AG Y H
Sbjct: 807 GAAAGAYEH 815
>sp|VPR_HV2BE|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 5 GYYLH 9
GYY+H
Sbjct: 48 GYYIH 52
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 GASAGYYLHY 10
G A YY H+
Sbjct: 432 GEIASYYTHW 441
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 GASAGYYLHY 10
G A YY H+
Sbjct: 432 GEIASYYTHW 441
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 GASAGYYLHY 10
G A YY H+
Sbjct: 436 GELASYYTHW 445
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 5 GYYLHY 10
G+Y HY
Sbjct: 831 GFYKHY 836
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 5 GYYLHY 10
G+Y HY
Sbjct: 801 GFYKHY 806
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 5 GYYLHY 10
G+Y HY
Sbjct: 792 GFYKHY 797
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 5 GYYLHY 10
G+Y HY
Sbjct: 793 GFYKHY 798
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 SAGYYLHY 10
S+G Y+H+
Sbjct: 406 SSGCYIHF 413
>sp|PG021_VAR67|HOST range factor p28|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 GYYLHY 10
G Y+HY
Sbjct: 100 GLYIHY 105
>sp|PG021_VACC8|HOST range factor p28|Vaccinia virus (strain LC16m8) (VACV)
Query: 5 GYYLHY 10
G Y+HY
Sbjct: 100 GLYIHY 105
>sp|PG021_VACC0|HOST range factor p28|Vaccinia virus (strain LC16m0) (VACV)
Query: 5 GYYLHY 10
G Y+HY
Sbjct: 100 GLYIHY 105
>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 5 GYYLHY 10
G Y+HY
Sbjct: 100 GLYIHY 105
>sp|PG021_MONPV|HOST range factor p28|Monkeypox virus (MPXV)
Query: 5 GYYLHY 10
G Y+HY
Sbjct: 100 GLYIHY 105
>sp|PG021_CWPXG|HOST range factor p28|Cowpox virus (strain GRI-90 /
Query: 5 GYYLHY 10
G Y+HY
Sbjct: 100 GLYIHY 105
>sp|PG021_CWPXB|HOST range factor p28|Cowpox virus (strain Brighton Red)
Query: 5 GYYLHY 10
G Y+HY
Sbjct: 100 GLYIHY 105
>sp|VL2_HPV31|MINOR capsid protein L2|Human papillomavirus 31
Query: 1 GASAGYYLHY 10
GA+ G +HY
Sbjct: 310 GATIGARVHY 319
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 3 SAGYYLHY 10
S+G Y+H+
Sbjct: 407 SSGCYVHF 414
>sp|PG086_VARV|ENTRY-FUSION complex protein OPG086|Variola virus
Query: 2 ASAGYYLHY 10
ASA YL+Y
Sbjct: 66 ASAQIYLYY 74
>sp|PG086_VAR67|ENTRY-FUSION complex protein OPG086|Variola virus (isolate
Query: 2 ASAGYYLHY 10
ASA YL+Y
Sbjct: 66 ASAQIYLYY 74
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 SAGYYLHY 10
S G Y HY
Sbjct: 27 SLGLYSHY 34
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 SAGYYLHY 10
S G Y HY
Sbjct: 27 SLGLYSHY 34
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 SAGYYLHY 10
S G Y HY
Sbjct: 27 SLGLYSHY 34
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 SAGYYLHY 10
S G Y HY
Sbjct: 27 SLGLYSHY 34
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 SAGYYLHY 10
S G Y HY
Sbjct: 27 SLGLYSHY 34
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 4 AGYYLH 9
AGY LH
Sbjct: 173 AGYTLH 178
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 GASAGYYLHY 10
G SAG HY
Sbjct: 1707 GFSAGLLKHY 1716
77|SequenceR|390|381|SFQYSGASAG
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 FQYSGA 7
FQY+GA
Sbjct: 167 FQYTGA 172
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 FQYSGA 7
FQY+GA
Sbjct: 167 FQYTGA 172
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 FQYSGA 7
FQY+GA
Sbjct: 167 FQYTGA 172
78|SequenceR|395|386|EGGVMSFQYS
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 EGGVMSFQYS 10
+G +M+F YS
Sbjct: 1944 DGHLMAFDYS 1953
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 EGGVMSFQYS 10
+G +M+F YS
Sbjct: 1945 DGHLMAFDYS 1954
>sp|GM_HHV7J|ENVELOPE glycoprotein M|Human herpesvirus 7 (strain JI)
Query: 4 VMSFQYS 10
VMSF YS
Sbjct: 245 VMSFVYS 251
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 1 EGGVMSFQY 9
EGG + QY
Sbjct: 234 EGGSLPIQY 242
>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EGGVMSFQY 9
EGG + QY
Sbjct: 248 EGGSLPIQY 256
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 2 GGVMSFQYS 10
GG + QYS
Sbjct: 603 GGTLRAQYS 611
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 2 GGVMSFQYS 10
GG +S QY+
Sbjct: 159 GGKISVQYN 167
79|SequenceR|400|391|RPPSREGGVM
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RPPSREGGV 9
RP EGGV
Sbjct: 708 RPEETEGGV 716
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 PSREGGVM 10
PSREGG +
Sbjct: 3095 PSREGGCV 3102
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 1 RPPSREGG 8
+PP R GG
Sbjct: 342 QPPVRNGG 349
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PPSRE 6
PPSRE
Sbjct: 476 PPSRE 480
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PPSRE 6
PPSRE
Sbjct: 476 PPSRE 480
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PPSRE 6
PPSRE
Sbjct: 476 PPSRE 480
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 RPPSREG 7
RP REG
Sbjct: 327 RPKDREG 333
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 PSREGGVM 10
PSR+GG +
Sbjct: 3093 PSRDGGCI 3100
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 PSREGGVM 10
PSR+GG +
Sbjct: 3095 PSRDGGCI 3102
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 PSREGGVM 10
PSR+GG +
Sbjct: 3095 PSRDGGCI 3102
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 PSREGGVM 10
PSR+GG +
Sbjct: 3095 PSRDGGCI 3102
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 PSREGGVM 10
PSR+GG +
Sbjct: 3095 PSRDGGCI 3102
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 PSREGGVM 10
PSR+GG +
Sbjct: 3095 PSRDGGCI 3102
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PPSREGG 8
PPS +GG
Sbjct: 127 PPSGKGG 133
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PPSREGG 8
PPS +GG
Sbjct: 127 PPSGKGG 133
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 2 PPSRE 6
PPSRE
Sbjct: 123 PPSRE 127
80|SequenceR|405|396|CPPLIRPPSR
>sp|PG096_VARV|PROTEIN OPG096|Variola virus
Query: 1 CPPLIRPPSR 10
CP ++RP R
Sbjct: 33 CPAILRPLIR 42
>sp|PG096_VAR67|PROTEIN OPG096|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CPPLIRPPSR 10
CP ++RP R
Sbjct: 33 CPAILRPLIR 42
>sp|PG096_VACCC|PROTEIN OPG096|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CPPLIRPPSR 10
CP ++RP R
Sbjct: 33 CPAILRPLIR 42
>sp|PG096_VACCA|PROTEIN OPG096|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CPPLIRPPSR 10
CP ++RP R
Sbjct: 33 CPAILRPLIR 42
>sp|PG096_MONPV|PROTEIN OPG096|Monkeypox virus (MPXV)
Query: 1 CPPLIRPPSR 10
CP ++RP R
Sbjct: 33 CPAILRPLIR 42
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 2 PPLIRPPS 9
PP IR P+
Sbjct: 291 PPKIRSPA 298
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 2 PPLIRPPS 9
PP+ RPP+
Sbjct: 509 PPIFRPPA 516
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PPLIRPPSR 10
PP+ R P R
Sbjct: 722 PPVPRGPDR 730
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 2 PPLIRPPSR 10
PP R P R
Sbjct: 390 PPFFRQPVR 398
>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)
Query: 1 CPPLIRP 7
C P+++P
Sbjct: 5 CEPILKP 11
>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41
Query: 2 PPLIRPPSR 10
P +IRPP R
Sbjct: 128 PFIIRPPER 136
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 PLIRPPSR 10
P+I PSR
Sbjct: 1744 PVINTPSR 1751
>sp|MB43_HHV11|MEMBRANE protein UL43|Human herpesvirus 1 (strain 17)
Query: 2 PPLIRPPSR 10
PPL RP +R
Sbjct: 81 PPLARPTAR 89
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 PLIRPPSR 10
P+I PSR
Sbjct: 1736 PVINTPSR 1743
>sp|DUT_HHV8P|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 8 type P
Query: 1 CPPLIRP 7
CP L+RP
Sbjct: 37 CPILVRP 43
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 1 CPPLIRPPSR 10
C PL+R P R
Sbjct: 798 CRPLLRLPFR 807
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 1 CPPLIRPPSR 10
C PL+R P R
Sbjct: 798 CRPLLRLPFR 807
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 1 CPPLIRPPSR 10
C PL+R P R
Sbjct: 798 CRPLLRLPFR 807
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 PLIRPPSR 10
P+I PSR
Sbjct: 1740 PVINAPSR 1747
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 2 PPLIRPPSR 10
PPL+R SR
Sbjct: 203 PPLLRQNSR 211
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 CPPLIRPPSR 10
C PL+R P R
Sbjct: 787 CRPLLRLPFR 796
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 2 PPLIRP 7
PP++RP
Sbjct: 860 PPILRP 865
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 2 PPLIRP 7
PP++RP
Sbjct: 860 PPILRP 865
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PPLIR 6
PPLIR
Sbjct: 1029 PPLIR 1033
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 PPLIRPPSR 10
PLI PSR
Sbjct: 41 SPLIEHPSR 49
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 3 PLIRPPSR 10
PLIR PS
Sbjct: 94 PLIRHPSE 101
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PPLIR 6
PPLIR
Sbjct: 1028 PPLIR 1032
81|SequenceR|410|401|TSANTCPPLI
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 5 TCPPLI 10
TCPPLI
Sbjct: 548 TCPPLI 553
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 3 ANTCPPLI 10
+NTCPP I
Sbjct: 21 SNTCPPDI 28
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 3 ANTCPPL 9
AN CPPL
Sbjct: 182 ANDCPPL 188
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 6 CPPLI 10
CPPLI
Sbjct: 555 CPPLI 559
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 6 CPPLI 10
CPPLI
Sbjct: 552 CPPLI 556
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 6 CPPLI 10
CPPLI
Sbjct: 552 CPPLI 556
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 6 CPPLI 10
CPPLI
Sbjct: 542 CPPLI 546
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 3 ANTCPPLI 10
AN+ PP+I
Sbjct: 684 ANSTPPVI 691
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 6 CPPLI 10
CPPLI
Sbjct: 554 CPPLI 558
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 3 ANTCPPLI 10
AN+ PP+I
Sbjct: 681 ANSTPPVI 688
>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38
Query: 2 SANTCPP 8
++NTCPP
Sbjct: 21 ASNTCPP 27
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 6 CPPLI 10
CPPLI
Sbjct: 545 CPPLI 549
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 5 TCPPL 9
TCPP+
Sbjct: 1624 TCPPI 1628
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 5 TCPPL 9
TCPP+
Sbjct: 1624 TCPPI 1628
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 6 CPPLI 10
CPPL+
Sbjct: 522 CPPLL 526
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 6 CPPLI 10
CPPL+
Sbjct: 558 CPPLL 562
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 6 CPPLI 10
CPPL+
Sbjct: 553 CPPLL 557
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 6 CPPLI 10
CPPL+
Sbjct: 591 CPPLL 595
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 6 CPPLI 10
CPPL+
Sbjct: 558 CPPLM 562
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 6 CPPLI 10
CPPL+
Sbjct: 559 CPPLL 563
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 6 CPPLI 10
CPPL+
Sbjct: 557 CPPLL 561
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 6 CPPLI 10
CPPL+
Sbjct: 572 CPPLL 576
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 6 CPPLI 10
CPPL+
Sbjct: 560 CPPLL 564
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 6 CPPLI 10
CPPL+
Sbjct: 558 CPPLM 562
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 6 CPPLI 10
CPPL+
Sbjct: 560 CPPLL 564
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 6 CPPLI 10
CPPL+
Sbjct: 528 CPPLM 532
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 6 CPPLI 10
CPPL+
Sbjct: 560 CPPLL 564
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 6 CPPLI 10
CPPL+
Sbjct: 570 CPPLL 574
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 6 CPPLI 10
CPPL+
Sbjct: 553 CPPLM 557
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 6 CPPLI 10
CPPL+
Sbjct: 569 CPPLL 573
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 6 CPPLI 10
CPPL+
Sbjct: 556 CPPLL 560
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 6 CPPLI 10
CPPL+
Sbjct: 545 CPPLL 549
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 6 CPPLI 10
CPPL+
Sbjct: 559 CPPLL 563
>sp|TEG7_HHV7J|TEGUMENT protein UL51 homolog|Human herpesvirus 7 (strain JI)
Query: 4 NTCPP 8
N CPP
Sbjct: 84 NNCPP 88
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 6 CPPLI 10
CPPL+
Sbjct: 553 CPPLM 557
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 ANTCPPLI 10
A+TCPP +
Sbjct: 1203 AHTCPPYL 1210
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 6 CPPLI 10
CPPL+
Sbjct: 553 CPPLM 557
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 6 CPPLI 10
CPPL+
Sbjct: 552 CPPLL 556
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 6 CPPLI 10
CPPL+
Sbjct: 560 CPPLL 564
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 6 CPPLI 10
CPPL+
Sbjct: 539 CPPLL 543
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 6 CPPLI 10
CPP+I
Sbjct: 541 CPPVI 545
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 6 CPPLI 10
CPP+I
Sbjct: 540 CPPVI 544
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 6 CPPLI 10
CPPL+
Sbjct: 545 CPPLL 549
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 6 CPPLI 10
CPPL+
Sbjct: 557 CPPLL 561
>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)
Query: 1 TSANTCPPL 9
T+ ++CPP
Sbjct: 208 TAGSSCPPF 216
>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 ANTCPPLI 10
A CPPL+
Sbjct: 513 AVACPPLV 520
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 1 TSANTCPPLI 10
TSA+T P +I
Sbjct: 133 TSADTTPAII 142
>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 CPPLI 10
CPPL+
Sbjct: 516 CPPLV 520
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 6 CPPLI 10
CPP++
Sbjct: 553 CPPML 557
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 SANTCPPLI 10
S+ TC PLI
Sbjct: 642 SSTTCGPLI 650
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 6 CPPLI 10
CPP++
Sbjct: 552 CPPIL 556
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 6 CPPLI 10
CPP++
Sbjct: 566 CPPIL 570
82|SequenceR|415|406|LLASGTSANT
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 LLASGTSANT 10
LLA+G ANT
Sbjct: 376 LLAAGVDANT 385
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 ASGTSANT 10
ASG+S NT
Sbjct: 34 ASGSSGNT 41
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 ASGTSANT 10
ASG+S NT
Sbjct: 34 ASGSSGNT 41
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 ASGTSANT 10
ASG+S NT
Sbjct: 34 ASGSSGNT 41
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 LLASGTSAN 9
L GTSAN
Sbjct: 302 LYIKGTSAN 310
83|SequenceR|420|411|PLSPNLLASG
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LSPNLLAS 9
LSP LLA+
Sbjct: 802 LSPGLLAT 809
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 LSPNLLAS 9
LSP LLA+
Sbjct: 802 LSPGLLAT 809
>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)
Query: 3 SPNLLASG 10
SP L ASG
Sbjct: 307 SPRLYASG 314
>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)
Query: 3 SPNLLASG 10
SP L ASG
Sbjct: 303 SPRLYASG 310
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LSPNLLA 8
SPNLLA
Sbjct: 412 FSPNLLA 418
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LSPNLLA 8
SPNLLA
Sbjct: 412 FSPNLLA 418
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LSPNLLA 8
SPNLLA
Sbjct: 412 FSPNLLA 418
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 LSPNLLA 8
L PN+LA
Sbjct: 509 LGPNILA 515
84|SequenceR|425|416|VDSQNPLSPN
>sp|VE4_HPV39|PROTEIN E4|Human papillomavirus 39
Query: 1 VDSQNPLSPN 10
V SQ+PLSP
Sbjct: 51 VQSQSPLSPT 60
>sp|LRP2_HHV1F|LATENCY-RELATED protein 2|Human herpesvirus 1 (strain F)
Query: 1 VDSQNPLS 8
+DS+NPLS
Sbjct: 71 IDSKNPLS 78
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 VDSQNPLSP 9
VD+ NP +P
Sbjct: 3331 VDTSNPKTP 3339
>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49
Query: 1 VDSQNPLSPN 10
+D+ NP+ PN
Sbjct: 104 IDTVNPIDPN 113
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VDSQNPLSP 9
VD+ NP +P
Sbjct: 3331 VDTSNPKTP 3339
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 VDSQNPLSP 9
VD+ NP +P
Sbjct: 3354 VDTANPKTP 3362
>sp|VE6_HPV32|PROTEIN E6|Human papillomavirus type 32
Query: 4 QNPLSPN 10
Q PLSP+
Sbjct: 108 QKPLSPS 114
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VDSQNPLSP 9
VD+ NP +P
Sbjct: 3354 VDTANPKTP 3362
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 3 SQNPLSPN 10
SQN L+PN
Sbjct: 481 SQNALNPN 488
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 3 SQNPLSPN 10
SQN L+PN
Sbjct: 481 SQNALNPN 488
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 5 NPLSPN 10
NP+SPN
Sbjct: 440 NPISPN 445
>sp|PHOSP_DUVV|PHOSPHOPROTEIN virus (DUVV)
Query: 4 QNPLSP 9
+NPLSP
Sbjct: 87 ENPLSP 92
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 1 VDSQNPLSPN 10
+DS +PL P+
Sbjct: 103 IDSLDPLGPS 112
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 1 VDSQNPLSPN 10
VD+ NP+ P+
Sbjct: 104 VDTLNPVEPS 113
>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19
Query: 1 VDSQNPLSPN 10
VD+ NP+ P
Sbjct: 103 VDTLNPVEPT 112
>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25
Query: 1 VDSQNPLSPN 10
VD+ NP+ P
Sbjct: 103 VDTLNPVEPT 112
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 1 VDSQNPLSPN 10
VD+ NP+ P
Sbjct: 104 VDTLNPVEPT 113
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 DSQNPL 7
DS+NPL
Sbjct: 1376 DSRNPL 1381
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 DSQNPL 7
DS+NPL
Sbjct: 1376 DSRNPL 1381
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 DSQNPL 7
DS+NPL
Sbjct: 1388 DSRNPL 1393
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 DSQNPL 7
DS+NPL
Sbjct: 1388 DSRNPL 1393
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 1 VDSQNPL 7
VD++NP+
Sbjct: 446 VDARNPI 452
85|SequenceR|430|421|GEAEVVDSQN
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 GEAEVVDSQN 10
GE EV+DS +
Sbjct: 2417 GECEVIDSDS 2426
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 GEAEVVDSQN 10
GE EV+DS +
Sbjct: 2417 GECEVIDSDS 2426
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 AEVVDSQ 9
AEVVDS+
Sbjct: 1011 AEVVDSE 1017
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 GEAEVVD 7
GEA+V+D
Sbjct: 748 GEAKVID 754
86|SequenceR|435|426|SNSHSGEAEV
>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P
Query: 1 SNSHSG 6
SNSH+G
Sbjct: 69 SNSHNG 74
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 SNSHSGEAEV 10
+NS SG+ E+
Sbjct: 1815 ANSRSGQREL 1824
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 SNSHSGEAEV 10
+NS SG+ E+
Sbjct: 1815 ANSRSGQREL 1824
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 SNSHSGEAEV 10
+NS SG+ E+
Sbjct: 1815 ANSRSGQREL 1824
87|SequenceR|440|431|AMNTPSNSHS
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 4 TPSNSHS 10
TPSN+H+
Sbjct: 1123 TPSNAHA 1129
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 4 TPSNSHS 10
TPSN+H+
Sbjct: 1123 TPSNAHA 1129
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 4 TPSNSHS 10
TPSN+H+
Sbjct: 1123 TPSNAHA 1129
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 4 TPSNSHS 10
TPSN+H+
Sbjct: 1123 TPSNAHA 1129
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 4 TPSNSHS 10
TPSN+H+
Sbjct: 1123 TPSNAHA 1129
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 4 TPSNSHS 10
TPSN+H+
Sbjct: 1123 TPSNAHA 1129
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 4 TPSNSHS 10
TPSN+H+
Sbjct: 1123 TPSNAHA 1129
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 TPSNSHS 10
TPSN+H+
Sbjct: 1123 TPSNAHA 1129
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 4 TPSNSHS 10
TPSN+H+
Sbjct: 1123 TPSNAHA 1129
>sp|VP40_EBOSU|MATRIX protein VP40|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 AMNTPSNS 8
M+TPSNS
Sbjct: 43 GMDTPSNS 50
>sp|J1L_HCMVA|UNCHARACTERIZED protein J1L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AMNTPSNSH 9
A+NTPS +H
Sbjct: 114 ALNTPSRTH 122
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 2 MNTPSNSH 9
MN P SH
Sbjct: 289 MNVPEGSH 296
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 NTPSNSH 9
N PSN H
Sbjct: 32 NVPSNYH 38
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 NTPSNSH 9
N PSN H
Sbjct: 32 NVPSNYH 38
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 NTPSNSH 9
N PSN H
Sbjct: 32 NVPSNYH 38
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 NTPSNSH 9
N PSN H
Sbjct: 32 NVPSNYH 38
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 2 MNTPSNSH 9
MN P +SH
Sbjct: 289 MNVPEHSH 296
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 NTPSNSH 9
N PSN H
Sbjct: 32 NVPSNYH 38
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 NTPSNSH 9
N PSN H
Sbjct: 32 NVPSNYH 38
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 3 NTPSNSH 9
N PSN H
Sbjct: 32 NVPSNYH 38
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 2 MNTPSNSH 9
MN P +SH
Sbjct: 289 MNVPEHSH 296
>sp|PG197_MONPV|PROTEIN OPG197|Monkeypox virus (MPXV)
Query: 2 MNTPSNSHS 10
+NT SNS S
Sbjct: 77 INTSSNSDS 85
88|SequenceR|445|436|LRASPAMNTP
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 1 LRASPAMNTP 10
LRA PA N P
Sbjct: 2 LRAQPAANDP 11
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LRASPAMNTP 10
LRA PA N P
Sbjct: 286 LRAQPAANDP 295
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 LRASPAMNTP 10
L+++PA+N+P
Sbjct: 62 LKSAPALNSP 71
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 LRASPAMNTP 10
L+ +PA+N+P
Sbjct: 62 LKGAPALNSP 71
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 LRASPAMNTP 10
L+ +PA+N+P
Sbjct: 62 LKGAPALNSP 71
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 1 LRASPAMNTP 10
LR PA N P
Sbjct: 286 LRVQPAANDP 295
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 LRASPAMNTP 10
L+ +PA+N+P
Sbjct: 62 LKTAPALNSP 71
Query: 5 PAMNTP 10
P MNTP
Sbjct: 344 PTMNTP 349
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 ASPAMNTP 10
ASPA++TP
Sbjct: 88 ASPALHTP 95
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 ASPAMNTP 10
ASPA++TP
Sbjct: 88 ASPALHTP 95
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 ASPAMNTP 10
ASPA++TP
Sbjct: 88 ASPALHTP 95
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 1 LRASPAMNTP 10
L SP NTP
Sbjct: 163 LSGSPITNTP 172
>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus
Query: 1 LRASPAMNTP 10
L SP NTP
Sbjct: 163 LSGSPITNTP 172
>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate
Query: 1 LRASPAMNTP 10
L SP NTP
Sbjct: 163 LSGSPITNTP 172
>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 LRASPAMNTP 10
L SP NTP
Sbjct: 163 LSGSPITNTP 172
>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 LRASPAMNTP 10
L SP NTP
Sbjct: 163 LSGSPITNTP 172
>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LRASPAMNTP 10
L SP NTP
Sbjct: 163 LSGSPITNTP 172
>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)
Query: 1 LRASPAMNTP 10
L SP NTP
Sbjct: 163 LSGSPITNTP 172
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 1 LRASPAMNTP 10
L SP NTP
Sbjct: 163 LSGSPITNTP 172
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 LRASPAMNTP 10
L+ P MNTP
Sbjct: 330 LQGLPVMNTP 339
Query: 1 LRASPAMNTP 10
+++ PA+N+P
Sbjct: 62 VKSLPALNSP 71
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 LRASPAMNTP 10
L+ P MNTP
Sbjct: 340 LQGLPVMNTP 349
Query: 1 LRASPAMNTP 10
++ SP +N+P
Sbjct: 62 IKTSPMLNSP 71
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 LRASPAMNTP 10
L+ P MNTP
Sbjct: 340 LQGLPVMNTP 349
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 LRASPAMNTP 10
++ +PA+N+P
Sbjct: 62 IKTAPALNSP 71
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 LRASPAMNTP 10
++ +PA+N+P
Sbjct: 62 IKTAPALNSP 71
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 LRASPAMNTP 10
+++ PA+N+P
Sbjct: 62 IKSMPALNSP 71
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 LRASPAMNTP 10
+++ PA+N+P
Sbjct: 62 IKSMPALNSP 71
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 LRASPAMNTP 10
+++ PA+N+P
Sbjct: 62 IKSMPALNSP 71
Query: 5 PAMNTP 10
P MNTP
Sbjct: 333 PTMNTP 338
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 LRASPAMNTP 10
+++ PA+N+P
Sbjct: 62 IKSMPALNSP 71
Query: 5 PAMNTP 10
P MNTP
Sbjct: 334 PVMNTP 339
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 LRASPAMNTP 10
+++ PA+N+P
Sbjct: 62 IKSMPALNSP 71
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 5 PAMNTP 10
P MNTP
Sbjct: 333 PTMNTP 338
Query: 1 LRASPAMNTP 10
++ PA+N+P
Sbjct: 62 IKTLPALNSP 71
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 5 PAMNTP 10
P MNTP
Sbjct: 333 PTMNTP 338
Query: 1 LRASPAMNTP 10
+++ PA+N+P
Sbjct: 62 IKSLPALNSP 71
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 LRASPAMNTP 10
+++ PA+N+P
Sbjct: 62 IKSLPALNSP 71
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 5 PAMNTP 10
P MNTP
Sbjct: 333 PTMNTP 338
Query: 1 LRASPAMNTP 10
++ PA+N+P
Sbjct: 62 IKTLPALNSP 71
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 5 PAMNTP 10
P MNTP
Sbjct: 335 PTMNTP 340
Query: 1 LRASPAMNTP 10
+++ PA+N+P
Sbjct: 62 IKSLPALNSP 71
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 5 PAMNTP 10
P MNTP
Sbjct: 333 PTMNTP 338
Query: 1 LRASPAMNTP 10
+++ PA+N+P
Sbjct: 62 IKSLPALNSP 71
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 LRASPAMNTP 10
+++ PA+N+P
Sbjct: 62 IKSLPALNSP 71
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 5 PAMNTP 10
P MNTP
Sbjct: 335 PTMNTP 340
Query: 1 LRASPAMNTP 10
+++ PA+N+P
Sbjct: 62 IKSLPALNSP 71
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 5 PAMNTP 10
P MNTP
Sbjct: 333 PTMNTP 338
Query: 1 LRASPAMNTP 10
++ PA+N+P
Sbjct: 62 IKTLPALNSP 71
>sp|VIF_HV1YB|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 RASPAMNTP 10
R +P MN P
Sbjct: 184 RGNPIMNGP 192
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 LRASPAMNTP 10
+++ PA+N+P
Sbjct: 62 IKSMPALNSP 71
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 LRASPAMNTP 10
+++ PA+N+P
Sbjct: 62 IKSLPALNSP 71
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 5 PAMNTP 10
PA+N+P
Sbjct: 66 PALNSP 71
89|SequenceR|453|441|YPRWVAEELRASP
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 YPRWVAEE 8
YP+W+ E+
Sbjct: 293 YPKWIIEQ 300
>sp|NEP_I56A3|NUCLEAR export protein|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEIR 84
>sp|NEP_I97A1|NUCLEAR export protein|Influenza A virus (strain A/Hong
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I97A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I96A3|NUCLEAR export protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I96A2|NUCLEAR export protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I85A3|NUCLEAR export protein|Influenza A virus (strain
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I83A8|NUCLEAR export protein|Influenza A virus (strain A/Hong
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I83A1|NUCLEAR export protein|Influenza A virus (strain A/Chile/1/1983
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I80AA|NUCLEAR export protein|Influenza A virus (strain A/India/6263/1980
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I80A4|NUCLEAR export protein|Influenza A virus (strain A/Memphis/4/1980
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I80A2|NUCLEAR export protein|Influenza A virus (strain
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I78A8|NUCLEAR export protein|Influenza A virus (strain A/Memphis/18/1978
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I78A7|NUCLEAR export protein|Influenza A virus (strain A/Memphis/2/1978
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I78A4|NUCLEAR export protein|Influenza A virus (strain A/Mallard/New
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I78A3|NUCLEAR export protein|Influenza A virus (strain A/Mallard/New
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I77AB|NUCLEAR export protein|Influenza A virus (strain A/USSR/90/1977
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I77AA|NUCLEAR export protein|Influenza A virus (strain A/Brazil/11/1978
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I77A9|NUCLEAR export protein|Influenza A virus (strain A/Equine/New
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I77A4|NUCLEAR export protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I77A0|NUCLEAR export protein|Influenza A virus (strain A/Alaska/6/1977
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I76A6|NUCLEAR export protein|Influenza A virus (strain A/Memphis/110/1976
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I75A0|NUCLEAR export protein|Influenza A virus (strain A/Beijing/39/1975
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I73A5|NUCLEAR export protein|Influenza A virus (strain A/Port
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I72A4|NUCLEAR export protein|Influenza A virus (strain A/Memphis/101/1972
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I72A3|NUCLEAR export protein|Influenza A virus (strain A/Memphis/102/1972
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I72A2|NUCLEAR export protein|Influenza A virus (strain A/Udorn/307/1972
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I71A1|NUCLEAR export protein|Influenza A virus (strain A/Memphis/1/1971
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I70A0|NUCLEAR export protein|Influenza A virus (strain A/Qu/7/1970
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I69A0|NUCLEAR export protein|Influenza A virus (strain A/England/878/1969
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I68A5|NUCLEAR export protein|Influenza A virus (strain A/Korea/426/1968
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I68A4|NUCLEAR export protein|Influenza A virus (strain A/Hong
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I68A0|NUCLEAR export protein|Influenza A virus (strain A/Aichi/2/1968
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I67A2|NUCLEAR export protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I67A0|NUCLEAR export protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I61A1|NUCLEAR export protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I60A0|NUCLEAR export protein|Influenza A virus (strain A/Ann
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I59A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I57A5|NUCLEAR export protein|Influenza A virus (strain A/Singapore/1/1957
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I57A3|NUCLEAR export protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I57A2|NUCLEAR export protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I57A1|NUCLEAR export protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I57A0|NUCLEAR export protein|Influenza A virus (strain A/Japan/305/1957
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I54A2|NUCLEAR export protein|Influenza A virus (strain
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I51A0|NUCLEAR export protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I47A0|NUCLEAR export protein|Influenza A virus (strain A/Fort
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I45A0|NUCLEAR export protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I43A0|NUCLEAR export protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I36A0|NUCLEAR export protein|Influenza A virus (strain A/Henry/1936
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I35A3|NUCLEAR export protein|Influenza A virus (strain A/USA:Phila/1935
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I34A1|NUCLEAR export protein|Influenza A virus (strain A/Puerto
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I33A0|NUCLEAR export protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I24A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Japan/1924
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 74 RWLIEEVR 81
>sp|NEP_I18A0|NUCLEAR export protein|Influenza A virus (strain A/Brevig
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I07A0|NUCLEAR export protein|Influenza A virus (strain
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I06A0|NUCLEAR export protein|Influenza A virus (strain
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I03A0|NUCLEAR export protein|Influenza A virus (strain A/Hong
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I02A6|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I02A5|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I02A4|NUCLEAR export protein|Influenza A virus (strain A/Silky
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I02A3|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I02A2|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I02A1|NUCLEAR export protein|Influenza A virus (strain A/Guinea
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I02A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I01A3|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I01A2|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I01A1|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I01A0|NUCLEAR export protein|Influenza A virus (strain A/Silky
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I00A1|NUCLEAR export protein|Influenza A virus (strain A/New
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I00A0|NUCLEAR export protein|Influenza A virus (strain A/Duck/Hong
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 1 YPRWVAEE 8
YP W+A++
Sbjct: 290 YPDWIAQQ 297
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 PRWVAEELRAS 12
P W AE +RA+
Sbjct: 2396 PGWQAEAMRAA 2406
>sp|NEP_I50A0|NUCLEAR export protein|Influenza A virus (strain A/Fort
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I40A0|NUCLEAR export protein|Influenza A virus (strain A/Hickox/1940
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I05A1|NUCLEAR export protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 73 RWLIEEVR 80
>sp|NEP_I03A1|NUCLEAR export protein|Influenza A virus (strain
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I54A0|NUCLEAR export protein|Influenza A virus (strain A/Leningrad/1/1954
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I000X|NUCLEAR export protein|Influenza A virus (strain A/X-31
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 77 RWLIEEVR 84
>sp|NEP_I02A7|NUCLEAR export protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 67 RWLIEEVR 74
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 PRWVAEELRAS 12
P W AE LRA+
Sbjct: 2399 PGWQAEALRAA 2409
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 YPRWVAEE 8
YP W+A++
Sbjct: 290 YPDWIAQQ 297
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 PRWVAEELRAS 12
P W AE LRA+
Sbjct: 2401 PGWQAEALRAA 2411
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 PRWVAEELRAS 12
P W AE LRA+
Sbjct: 2401 PGWQAEALRAA 2411
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 PRWVAEELRAS 12
P W AE LRA+
Sbjct: 2399 PGWQAEALRAA 2409
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 PRWVAEELRAS 12
P W AE LRA+
Sbjct: 2399 PGWQAEALRAA 2409
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 PRWVAEELRAS 12
P W AE LRA+
Sbjct: 2399 PGWQAEALRAA 2409
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 YPRWVAEE 8
YP W+A++
Sbjct: 290 YPDWIAQQ 297
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 YPRWVAEE 8
YP W+A++
Sbjct: 292 YPDWIAQQ 299
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 PRWVAEELRAS 12
P W AE +RA+
Sbjct: 2391 PGWQAEAMRAA 2401
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 1 YPRWVAE 7
YP+WV E
Sbjct: 326 YPQWVKE 332
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 YPRWVAE 7
YP W+A+
Sbjct: 291 YPEWIAQ 297
>sp|NEP_I73A4|NUCLEAR export protein|Influenza A virus (strain
Query: 3 RWVAEELR 10
RW+ EE+R
Sbjct: 74 RWLIEEVR 81
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 YPRWVAEE 8
YP W+A++
Sbjct: 289 YPDWIAQQ 296
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 YPRWVAEE 8
YP W+A++
Sbjct: 292 YPDWIAQQ 299
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 YPRWVAEEL 9
+P W EEL
Sbjct: 1483 FPLWSTEEL 1491
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 YPRWVAEEL 9
+P W EEL
Sbjct: 1483 FPLWSTEEL 1491
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 1 YPRWVAEE 8
YP W+A++
Sbjct: 291 YPNWMAQQ 298
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 2 PRWVAEELRASP 13
PRW AE A+P
Sbjct: 65 PRWRAEGRAANP 76
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 1 YPRWVAEE 8
YP W+A +
Sbjct: 290 YPDWIAHQ 297
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 PRWVAEELRAS 12
P W AE +RA+
Sbjct: 2393 PGWQAEAMRAA 2403
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 3 RWVAEELR 10
RWV +E+R
Sbjct: 1603 RWVDQEVR 1610
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 1 YPRWVAEE 8
YP W+A +
Sbjct: 290 YPDWIAHQ 297
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 1 YPRWVAEELR 10
YP W+ E+ R
Sbjct: 696 YPPWLTEKER 705
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 1 YPRWVAEELR 10
YP W+ E+ R
Sbjct: 696 YPPWLTEKER 705
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 3 RWVAEELR 10
RWV +E+R
Sbjct: 1603 RWVDQEVR 1610
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 3 RWVAEELR 10
RWV +E+R
Sbjct: 1603 RWVDQEVR 1610
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 3 RWVAEELR 10
RWV +E+R
Sbjct: 1603 RWVDQEVR 1610
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 3 RWVAEELR 10
RWV +E+R
Sbjct: 1603 RWVDQEVR 1610
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 WVAEELRASP 13
WV E+L P
Sbjct: 4838 WVEEDLTKGP 4847
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PRWVAEELRASP 13
PRW+ + A P
Sbjct: 2067 PRWLDARVYADP 2078
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 3 RWVAEELR 10
RWV +E+R
Sbjct: 1604 RWVDQEVR 1611
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 3 RWVAEELR 10
RWV +E+R
Sbjct: 1603 RWVDQEVR 1610
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 3 RWVAEELR 10
RWV +E+R
Sbjct: 1603 RWVDQEVR 1610
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 3 RWVAEELR 10
RWV +E+R
Sbjct: 1603 RWVDQEVR 1610
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 3 RWVAEELR 10
RWV +E+R
Sbjct: 1603 RWVDQEVR 1610
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 3 RWVAEELR 10
RWV +E+R
Sbjct: 1603 RWVDQEVR 1610
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 1 YPRWVAEE 8
YP W+A +
Sbjct: 289 YPDWIAHQ 296
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 YPRWVAEE 8
YP W++E+
Sbjct: 696 YPPWLSEK 703
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 1 YPRWVAEE 8
YP W++E+
Sbjct: 696 YPPWLSEK 703
>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United
Query: 1 YPRWVAEE 8
YP W++ E
Sbjct: 127 YPTWISGE 134
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 1 YPRWVAEE 8
YP W+ E
Sbjct: 127 YPTWIPGE 134
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PRWVAEELR 10
PR+VAE+ +
Sbjct: 291 PRFVAEDFQ 299
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 YPRWVAEE 8
YP W+A +
Sbjct: 291 YPDWMAHQ 298
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 YPRWVAEE 8
YP W+ E+
Sbjct: 696 YPPWLTEK 703
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 YPRWVAEE 8
YP W+ E+
Sbjct: 696 YPPWLTEK 703
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 YPRWVAEE 8
YP W+ E+
Sbjct: 696 YPPWLTEK 703
>sp|CEP1_HHV11|CYTOPLASMIC envelopment protein 1|Human herpesvirus 1 (strain 17)
Query: 4 WVAEELRA 11
W +EE+RA
Sbjct: 266 WASEEVRA 273
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 1 YPRWV 5
YP W+
Sbjct: 295 YPEWI 299
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 1 YPRWVAEE 8
YP W+ +
Sbjct: 295 YPEWIMTQ 302
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 1 YPRWVAEE 8
YP W+ +
Sbjct: 293 YPEWIVTQ 300
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 1 YPRWVAEE 8
YP W+ +
Sbjct: 294 YPEWIMTQ 301
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PRWVAEELRASP 13
P+W+ + A P
Sbjct: 2067 PKWLDARVYADP 2078
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PRWVAEELRASP 13
P+W+ + A P
Sbjct: 2067 PKWLDARVYADP 2078
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PRWVAEELRASP 13
P+W+ + A P
Sbjct: 2067 PKWLDARVYADP 2078
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PRWVAEELRASP 13
P+W+ + A P
Sbjct: 2067 PKWLDARVYADP 2078
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 3 RWVAEELR 10
+WV +E+R
Sbjct: 1604 KWVDQEVR 1611
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 1 YPRWV 5
YP W+
Sbjct: 291 YPEWI 295
THE END