1|Sequence|1|10|MFGLKRNAVI
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 MFGLKRNAV 9
MFGLKR+ V
Sbjct: 374 MFGLKRHGV 382
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 MFGLKR 6
+FGLKR
Sbjct: 641 VFGLKR 646
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 MFGLKR 6
+FGLKR
Sbjct: 641 VFGLKR 646
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 MFGLKR 6
+FGLKR
Sbjct: 641 VFGLKR 646
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 MFGLKR 6
+FGLKR
Sbjct: 641 VFGLKR 646
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 MFGLKR 6
+FGLKR
Sbjct: 641 VFGLKR 646
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 MFGLKR 6
+FGLKR
Sbjct: 641 VFGLKR 646
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 MFGLKR 6
+FGLKR
Sbjct: 641 VFGLKR 646
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 MFGLKR 6
+FGLKR
Sbjct: 641 VFGLKR 646
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 1 MFGLKR 6
+FGLKR
Sbjct: 642 VFGLKR 647
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 MFGLKR 6
+FGLKR
Sbjct: 641 VFGLKR 646
2|Sequence|6|15|RNAVIGLNLY
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 AVIGLNLY 10
AV+G N+Y
Sbjct: 1310 AVVGRNIY 1317
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 2 NAVIGLN 8
NAVIGL+
Sbjct: 595 NAVIGLH 601
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 RNAVIGLN 8
RN V G+N
Sbjct: 771 RNGVYGIN 778
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 RNAVIGLN 8
RN V G+N
Sbjct: 771 RNGVYGIN 778
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 RNAVIGLN 8
RN V G+N
Sbjct: 771 RNGVYGIN 778
3|Sequence|11|20|GLNLYCGGAG
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 1 GLNLYCG 7
G++LYCG
Sbjct: 170 GIDLYCG 176
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 1 GLNLYCG 7
G++LYCG
Sbjct: 170 GIDLYCG 176
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen
Query: 1 GLNLYCG 7
G++LYCG
Sbjct: 167 GIDLYCG 173
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 1 GLNLYCG 7
G++LYCG
Sbjct: 169 GIDLYCG 175
>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)
Query: 1 GLNLYCG 7
G++LYCG
Sbjct: 167 GIDLYCG 173
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 2 LNLYCGG 8
LN+YC G
Sbjct: 595 LNIYCTG 601
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 LNLYCGG 8
LN+YC G
Sbjct: 593 LNIYCTG 599
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 2 LNLYCGG 8
LN+YC G
Sbjct: 592 LNIYCTG 598
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 2 LNLYCGG 8
LN+YC G
Sbjct: 596 LNIYCTG 602
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GLNLYCGG 8
G + YCGG
Sbjct: 2577 GWSYYCGG 2584
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GLNLYCGG 8
G + YCGG
Sbjct: 2574 GWSYYCGG 2581
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GLNLYCGG 8
G + YCGG
Sbjct: 2577 GWSYYCGG 2584
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GLNLYCGG 8
G + YCGG
Sbjct: 2577 GWSYYCGG 2584
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 GLNLYCGG 8
G + YCGG
Sbjct: 2577 GWSYYCGG 2584
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GLNLYCGG 8
G + YCGG
Sbjct: 2577 GWSYYCGG 2584
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GLNLYCGG 8
G + YCGG
Sbjct: 2577 GWSYYCGG 2584
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 NLYCGGA 9
+LYCG A
Sbjct: 1149 SLYCGAA 1155
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 LNLYCGGAG 10
L+LY GAG
Sbjct: 1993 LSLYASGAG 2001
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 LYCGG 8
LYCGG
Sbjct: 2688 LYCGG 2692
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 LYCGG 8
LYCGG
Sbjct: 2690 LYCGG 2694
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 LYCGG 8
LYCGG
Sbjct: 2682 LYCGG 2686
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 LYCGG 8
LYCGG
Sbjct: 2690 LYCGG 2694
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 GLNLYC 6
GLN YC
Sbjct: 5062 GLNYYC 5067
Query: 3 NLYCGGAG 10
NLY GAG
Sbjct: 6483 NLYNYGAG 6490
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 LYCGG 8
LYCGG
Sbjct: 2683 LYCGG 2687
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 4 LYCGG 8
LYCGG
Sbjct: 2688 LYCGG 2692
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 LYCGG 8
LYCGG
Sbjct: 2683 LYCGG 2687
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GLNLYC 6
GLN YC
Sbjct: 5037 GLNYYC 5042
Query: 3 NLYCGGAG 10
NLY GAG
Sbjct: 6454 NLYNYGAG 6461
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 3 NLYCGGAG 10
NLYC G+
Sbjct: 419 NLYCFGSA 426
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 2 LNLYCG 7
LN YCG
Sbjct: 191 LNRYCG 196
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 GLNLYCGG 8
GL L CGG
Sbjct: 2063 GLILRCGG 2070
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 GLNLYCGG 8
GLN CGG
Sbjct: 427 GLNDSCGG 434
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 GLNLYCGG 8
GLN CGG
Sbjct: 427 GLNDSCGG 434
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 GLNLYCGG 8
GLN CGG
Sbjct: 427 GLNDSCGG 434
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 GLNLYCGG 8
GLN CGG
Sbjct: 427 GLNDSCGG 434
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 GLNLYCGG 8
GLN CGG
Sbjct: 427 GLNDSCGG 434
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 1 GLNLYCGG 8
GLN CGG
Sbjct: 427 GLNDSCGG 434
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 GLNLYCGG 8
GLN CGG
Sbjct: 427 GLNDSCGG 434
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 GLNLYCGG 8
GLN CGG
Sbjct: 427 GLNDSCGG 434
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 GLNLYCGG 8
GLN CGG
Sbjct: 427 GLNDSCGG 434
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 4 LYCGG 8
L+CGG
Sbjct: 344 LFCGG 348
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 5 YCGG 8
YCGG
Sbjct: 1667 YCGG 1670
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 5 YCGG 8
YCGG
Sbjct: 1653 YCGG 1656
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 5 YCGG 8
YCGG
Sbjct: 1660 YCGG 1663
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 5 YCGG 8
YCGG
Sbjct: 1660 YCGG 1663
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 5 YCGG 8
YCGG
Sbjct: 1656 YCGG 1659
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 LYCGG 8
L+CGG
Sbjct: 343 LFCGG 347
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 3 NLYCGGAG 10
N Y GG G
Sbjct: 134 NRYAGGPG 141
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 LNLYC 6
LN+YC
Sbjct: 464 LNVYC 468
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 6 CGGAG 10
CGG G
Sbjct: 155 CGGGG 159
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 6 CGGAG 10
CGG G
Sbjct: 158 CGGGG 162
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 GLNLYCGGAG 10
G N++C AG
Sbjct: 381 GCNVFCTLAG 390
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 6 CGGAG 10
CGG G
Sbjct: 501 CGGTG 505
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 NLYCGGA 9
N YC G+
Sbjct: 2263 NQYCNGS 2269
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 NLYCGGA 9
N YC G+
Sbjct: 2263 NQYCNGS 2269
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 LNLYCGGAG 10
+ ++C G G
Sbjct: 1627 IGMHCAGGG 1635
4|Sequence|16|25|CGGAGLGAGS
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 CGGAGLGAGS 10
CG LG GS
Sbjct: 1198 CGAPILGPGS 1207
>sp|PHOSP_PIV5|PHOSPHOPROTEIN virus 5 (strain W3)
Query: 3 GAGLGAGS 10
GAG+ AGS
Sbjct: 164 GAGIPAGS 171
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 GGAGLGAGS 10
G GLGAG+
Sbjct: 266 GNPGLGAGT 274
Query: 3 GAGLGAGS 10
GAG G GS
Sbjct: 271 GAGTGPGS 278
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 GGAGLGAGS 10
G GLGAG+
Sbjct: 268 GNPGLGAGT 276
Query: 3 GAGLGAGS 10
GAG G GS
Sbjct: 273 GAGTGPGS 280
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 CGGAGLGAGS 10
CG AGL GS
Sbjct: 2483 CGMAGLVRGS 2492
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas)
Query: 2 GGAGLGAG 9
GGAG+ G
Sbjct: 15 GGAGMADG 22
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 CGGAGLGAGS 10
CG AGL GS
Sbjct: 2484 CGMAGLVRGS 2493
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 CGGAGLGAGS 10
CG AGL GS
Sbjct: 2484 CGMAGLVRGS 2493
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 2 GGAGLG 7
GG GLG
Sbjct: 148 GGVGLG 153
>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62
Query: 2 GGAGLGAGS 10
GG G+G S
Sbjct: 54 GGLGIGTAS 62
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 2 GGAGLGAGS 10
GGAGL AG+
Sbjct: 937 GGAGLEAGA 945
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 2 GGAGLGAGS 10
GGAGL AG+
Sbjct: 937 GGAGLEAGA 945
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 GGAGLGAGS 10
GGAGL AG+
Sbjct: 937 GGAGLEAGA 945
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 2 GGAGLGAG 9
G AG+G+G
Sbjct: 458 GMAGVGSG 465
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 2 GGAGLGAGS 10
GGAGL AG+
Sbjct: 937 GGAGLEAGA 945
>sp|BLLF2_EBVG|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CGGAGL 6
CG AGL
Sbjct: 115 CGPAGL 120
>sp|BLLF2_EBVB9|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CGGAGL 6
CG AGL
Sbjct: 115 CGPAGL 120
>sp|BLLF2_EBVA8|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CGGAGL 6
CG AGL
Sbjct: 115 CGPAGL 120
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 GGAGLGAGS 10
GGAGL AG+
Sbjct: 937 GGAGLEAGA 945
5|Sequence|21|30|LGAGSGGATR
>sp|U21_HHV6Z|U21 glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 LGAGSGGATR 10
LGAG+G A R
Sbjct: 26 LGAGNGEAVR 35
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 1 LGAGSGG 7
+G+GSGG
Sbjct: 320 MGSGSGG 326
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 3 AGSGGATR 10
+GSGGA R
Sbjct: 22 SGSGGAIR 29
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 4 GSGGAT 9
GSGGAT
Sbjct: 34 GSGGAT 39
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 1 LGAGSGGATR 10
+ +GSGGA R
Sbjct: 20 ITSGSGGAIR 29
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 1 LGAGSGGATR 10
+ +GSGGA R
Sbjct: 20 ITSGSGGAIR 29
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 LGAGSGGA 8
LG G GGA
Sbjct: 626 LGLGIGGA 633
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 1 LGAGSGGATR 10
+ +GSGGA R
Sbjct: 20 ITSGSGGAIR 29
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 1 LGAGSGGATR 10
+ +GSGGA R
Sbjct: 20 ITSGSGGAIR 29
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 1 LGAGSGGATR 10
+ +GSGGA R
Sbjct: 20 ITSGSGGAIR 29
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 1 LGAGSGGATR 10
+ +GSGGA R
Sbjct: 20 ITSGSGGAIR 29
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 LGAGSGGATR 10
+ +GSGGA R
Sbjct: 20 ITSGSGGAIR 29
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 1 LGAGSGGATR 10
+ +GSGGA R
Sbjct: 20 ITSGSGGAIR 29
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 1 LGAGSGGATR 10
+ +GSGGA R
Sbjct: 20 ITSGSGGAIR 29
>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 LGAGSGGATR 10
+ +GSGGA R
Sbjct: 20 ITSGSGGAIR 29
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LGAGSGGA 8
LGA GGA
Sbjct: 805 LGASLGGA 812
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LGAGSGGA 8
LGA GGA
Sbjct: 805 LGASLGGA 812
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 3 AGSGGAT 9
+GSGG T
Sbjct: 210 SGSGGQT 216
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 3 AGSGGAT 9
+GSGG T
Sbjct: 210 SGSGGQT 216
6|Sequence|26|35|GGATRPGGRL
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 4 TRPGGR 9
TRPGGR
Sbjct: 289 TRPGGR 294
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 5 RPGGRL 10
RPGGR+
Sbjct: 1084 RPGGRM 1089
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 5 RPGGRL 10
RPGGR+
Sbjct: 1089 RPGGRM 1094
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 5 RPGGRL 10
RPGGR+
Sbjct: 1085 RPGGRM 1090
Query: 5 RPGGRL 10
RPGG L
Sbjct: 1250 RPGGSL 1255
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 5 RPGGRL 10
RPGGR+
Sbjct: 1085 RPGGRM 1090
Query: 5 RPGGRL 10
RPGG L
Sbjct: 1250 RPGGSL 1255
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 4 TRPGGRL 10
TRPGGR+
Sbjct: 3054 TRPGGRI 3060
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 RPGGR 9
RPGGR
Sbjct: 22 RPGGR 26
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 RPGGR 9
RPGGR
Sbjct: 22 RPGGR 26
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 4 TRPGGRL 10
TRPGG++
Sbjct: 3054 TRPGGKI 3060
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 5 RPGGRL 10
RPGG++
Sbjct: 1087 RPGGKM 1092
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 5 RPGGRL 10
RPGG++
Sbjct: 1087 RPGGKM 1092
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 5 RPGGRL 10
RPGG++
Sbjct: 1087 RPGGKM 1092
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 5 RPGGRL 10
RPGG++
Sbjct: 1087 RPGGKM 1092
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 RPGGRL 10
RPGG++
Sbjct: 1087 RPGGKM 1092
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 RPGGR 9
RPGGR
Sbjct: 22 RPGGR 26
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 2 GATRPG 7
ATRPG
Sbjct: 245 AATRPG 250
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 GGATRPG 7
GG RPG
Sbjct: 385 GGVQRPG 391
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 TRPGGRL 10
T PGG+L
Sbjct: 465 TPPGGKL 471
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 GGATRPGGR 9
GGA PG R
Sbjct: 24 GGAIIPGQR 32
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 1 GGATRPGGR 9
GGA PG R
Sbjct: 24 GGAIIPGQR 32
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 1 GGATRPG 7
GG RPG
Sbjct: 75 GGGGRPG 81
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GGATRPG 7
GG RPG
Sbjct: 207 GGGPRPG 213
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 GGATRPGGR 9
GGA PG R
Sbjct: 24 GGAIIPGQR 32
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 5 RPGGR 9
RPGGR
Sbjct: 22 RPGGR 26
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 5 RPGGR 9
RPGGR
Sbjct: 22 RPGGR 26
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 GATRPG 7
G TRPG
Sbjct: 446 GGTRPG 451
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 GATRPG 7
G TRPG
Sbjct: 446 GGTRPG 451
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 1 GGATRPG 7
GG RPG
Sbjct: 75 GGGGRPG 81
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 3 ATRPGGR 9
+TRP GR
Sbjct: 1083 STRPAGR 1089
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 5 RPGGR 9
RPGGR
Sbjct: 22 RPGGR 26
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 6 PGGRL 10
PGGRL
Sbjct: 355 PGGRL 359
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GGATRP 6
GGA RP
Sbjct: 2074 GGAKRP 2079
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 4 TRPGGRL 10
T+PGG++
Sbjct: 3051 TKPGGKV 3057
7|Sequence|31|40|PGGRLLATEK
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 1 PGGRLLATEK 10
P G L+ATE+
Sbjct: 327 PSGSLVATEQ 336
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 GGRLLATEK 10
GG L ATE+
Sbjct: 23 GGNLYATEE 31
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 2 GGRLLATEK 10
GG L ATE+
Sbjct: 23 GGNLYATEE 31
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 GGRLLATEK 10
GG L ATE+
Sbjct: 36 GGNLYATEE 44
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 GGRLLATEK 10
GG L ATE+
Sbjct: 23 GGNLYATEE 31
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 2 GGRLLATEK 10
GG L ATE+
Sbjct: 23 GGNLYATEE 31
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 2 GGRLLATEK 10
GG L ATE+
Sbjct: 23 GGNLYATEE 31
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 GGRLLATEK 10
GG L ATE+
Sbjct: 22 GGNLYATEE 30
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 2 GGRLLATEK 10
GG L ATE+
Sbjct: 23 GGNLYATEE 31
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 2 GGRLLATEK 10
GG L ATE+
Sbjct: 36 GGNLYATEE 44
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 2 GGRLLATEK 10
GG L ATE+
Sbjct: 22 GGNLYATEE 30
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 2 GGRLLATEK 10
GG L ATE+
Sbjct: 23 GGNLYATEE 31
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 2 GGRLLATEK 10
GG L ATE+
Sbjct: 22 GGNLYATEE 30
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 2 GGRLLATEK 10
GG L ATE+
Sbjct: 29 GGNLYATEE 37
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 2 GGRLLATEK 10
GG L ATE+
Sbjct: 29 GGNLYATEE 37
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 2 GGRLLATEK 10
GG L ATE+
Sbjct: 23 GGNLYATEE 31
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 2 GGRLLATEK 10
GG L ATE+
Sbjct: 36 GGNLYATEE 44
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 PGGRLLATE 9
PGG ATE
Sbjct: 214 PGGSREATE 222
8|Sequence|36|45|LATEKEASAR
***** No hits found ******
9|Sequence|41|50|EASARREIGG
>sp|VPR_HV2G1|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 1 EASARREIGG 10
+ + RRE+GG
Sbjct: 12 DGTPRRELGG 21
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 ASARREIGG 10
A AR+ IGG
Sbjct: 923 ALARKMIGG 931
10|Sequence|46|55|REIGGGEAGA
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 REIGGGEAGA 10
R GGEAGA
Sbjct: 294 RADDGGEAGA 303
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 EIGGGEAGA 10
E G G AGA
Sbjct: 1003 EYGAGHAGA 1011
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 GGGEAGA 10
GGG AGA
Sbjct: 1068 GGGVAGA 1074
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 GGGEAGA 10
GGG AGA
Sbjct: 1046 GGGVAGA 1052
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 GGGEAGA 10
GGG AGA
Sbjct: 1068 GGGVAGA 1074
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 GGGEAGA 10
GGG AGA
Sbjct: 1046 GGGVAGA 1052
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 GGGEAGA 10
GGG AGA
Sbjct: 1153 GGGIAGA 1159
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 GGGEAGA 10
GGG AGA
Sbjct: 1153 GGGIAGA 1159
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 4 GGGEAG 9
GGGE G
Sbjct: 648 GGGETG 653
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 IGGGE 7
IGGGE
Sbjct: 144 IGGGE 148
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 IGGGE 7
IGGGE
Sbjct: 144 IGGGE 148
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 3 IGGGEAG 9
+GG E+G
Sbjct: 4 VGGAESG 10
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 REIGGGE 7
+++GGGE
Sbjct: 2604 QQLGGGE 2610
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 REIGGGE 7
+++GGGE
Sbjct: 2631 QQLGGGE 2637
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 REIGGGE 7
+++GGGE
Sbjct: 2609 QQLGGGE 2615
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 5 GGEAGA 10
GGEAG+
Sbjct: 144 GGEAGS 149
11|Sequence|51|60|GEAGAVIGGS
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 GEAGAVIG 8
GEAG V+G
Sbjct: 219 GEAGRVVG 226
>sp|NS1_I60A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Ann
Query: 2 EAGAVIG 8
EAGA++G
Sbjct: 152 EAGAIVG 158
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 GEAGAVI 7
GEAGA+I
Sbjct: 2462 GEAGALI 2468
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 GEAGAVI 7
GEAGA+I
Sbjct: 2462 GEAGALI 2468
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 GEAGAVI 7
GEAGA+I
Sbjct: 2458 GEAGALI 2464
>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 GAVIGG 9
GA+IGG
Sbjct: 174 GALIGG 179
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 EAGAVIG 8
+AGAVIG
Sbjct: 1639 KAGAVIG 1645
12|Sequence|56|65|VIGGSAGASP
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 3 GGSAGASP 10
GSAG+SP
Sbjct: 88 AGSAGSSP 95
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 IGGSAGAS 9
IGG+AG S
Sbjct: 314 IGGTAGNS 321
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 VIGGSAG 7
++GGSAG
Sbjct: 1558 MLGGSAG 1564
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 VIGGSAG 7
++GGSAG
Sbjct: 1558 MLGGSAG 1564
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 VIGGSAG 7
++GGSAG
Sbjct: 1558 MLGGSAG 1564
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 VIGGSAG 7
++GGSAG
Sbjct: 1558 MLGGSAG 1564
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 VIGGSAG 7
++GGSAG
Sbjct: 1558 MLGGSAG 1564
>sp|MATRX_MEASB|MATRIX protein|Measles virus (strain Biken) (MeV)
Query: 2 IGGSAGASP 10
+GG G SP
Sbjct: 250 LGGIGGTSP 258
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 IGGSAG 7
IGG+AG
Sbjct: 1533 IGGTAG 1538
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 IGGSAG 7
IGG+AG
Sbjct: 1533 IGGTAG 1538
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 IGGSAG 7
IGG+AG
Sbjct: 1534 IGGAAG 1539
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 IGGSAG 7
IGG+AG
Sbjct: 1534 IGGAAG 1539
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VIGGSA 6
V+GGSA
Sbjct: 16 VVGGSA 21
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VIGGSA 6
V+GGSA
Sbjct: 16 VVGGSA 21
13|Sequence|61|70|AGASPPSTLT
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 2 GASPPSTL 9
G PPSTL
Sbjct: 175 GCKPPSTL 182
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 GASPPS 7
GASPPS
Sbjct: 38 GASPPS 43
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 5 PPSTLT 10
PP TLT
Sbjct: 88 PPDTLT 93
>sp|CEP3_HHV2H|CYTOPLASMIC envelopment protein 3|Human herpesvirus 2 (strain HG52)
Query: 3 ASPPSTLT 10
A PP+TLT
Sbjct: 82 ARPPATLT 89
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 GASPPST 8
GA+PP T
Sbjct: 468 GANPPKT 474
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 5 PPSTLT 10
PP TLT
Sbjct: 88 PPDTLT 93
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 1 AGASPPSTLT 10
G +PP T+T
Sbjct: 264 VGVNPPFTIT 273
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 1 AGASPPS 7
AG+SPP+
Sbjct: 269 AGSSPPT 275
>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)
Query: 2 GASPPSTL 9
G PPST+
Sbjct: 175 GGKPPSTM 182
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 1 AGASPPS 7
AG+SPP+
Sbjct: 269 AGSSPPT 275
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 1 AGASPPS 7
AG+SPP+
Sbjct: 269 AGSSPPT 275
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 GASPPST 8
GA PP+T
Sbjct: 477 GAKPPTT 483
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 1 AGASPPS 7
AG+SPP+
Sbjct: 269 AGSSPPT 275
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 1 AGASPPS 7
AG+SPP+
Sbjct: 269 AGSSPPT 275
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 AGASPPSTLT 10
A A+PP T+T
Sbjct: 1351 ATATPPGTVT 1360
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 AGASPPSTLT 10
A A+PP T+T
Sbjct: 1351 ATATPPGTVT 1360
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 AGASPPST 8
AG+ PP T
Sbjct: 107 AGSDPPRT 114
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 GASPPSTL 9
++PPSTL
Sbjct: 1587 ASTPPSTL 1594
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 GASPPSTL 9
++PPSTL
Sbjct: 1587 ASTPPSTL 1594
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 GASPPSTL 9
++PPSTL
Sbjct: 1587 ASTPPSTL 1594
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 GASPPSTL 9
++PPSTL
Sbjct: 1587 ASTPPSTL 1594
14|Sequence|66|75|PSTLTPDSRR
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 PSTLTPDSRR 10
PSTLTP S R
Sbjct: 742 PSTLTPRSVR 751
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 STLTPDSRR 10
STL P+SR+
Sbjct: 245 STLYPESRK 253
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 STLTPDSRR 10
STL P+SR+
Sbjct: 245 STLYPESRK 253
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 STLTPDSRR 10
STL P+SR+
Sbjct: 245 STLYPESRK 253
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 4 LTPDSRR 10
LTPD R+
Sbjct: 436 LTPDERK 442
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 STLTPDSRR 10
STL P+SR+
Sbjct: 245 STLYPESRK 253
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 STLTPDSRR 10
STL P+SR+
Sbjct: 245 STLYPESRK 253
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 PSTLTPDSRR 10
P PDSR+
Sbjct: 467 PGAGAPDSRK 476
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 PSTLTPDSRR 10
P PDSR+
Sbjct: 467 PGAGAPDSRK 476
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 4 LTPDSRR 10
LTP S+R
Sbjct: 538 LTPSSKR 544
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 3 TLTPDSR 9
TLTP SR
Sbjct: 2951 TLTPQSR 2957
15|Sequence|71|80|PDSRRVARPP
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 PDSRRVARPP 10
PDS RPP
Sbjct: 419 PDSSPTTRPP 428
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 1 PDSRRVAR 8
PD+RR+ R
Sbjct: 532 PDARRLYR 539
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 1 PDSRRVARPP 10
PD++ + +PP
Sbjct: 301 PDNQLMVQPP 310
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 1 PDSRRVARP 9
PD ++A+P
Sbjct: 562 PDQNQIAQP 570
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PDSRRVARP 9
PD ++A+P
Sbjct: 563 PDQNQIAQP 571
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 PDSRRVARPP 10
PD++ + PP
Sbjct: 287 PDTQLLIEPP 296
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PDSRRVARP 9
P SRR +RP
Sbjct: 357 PKSRRTSRP 365
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 PDSRRVARP 9
P SRR +RP
Sbjct: 357 PKSRRTSRP 365
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 PDSRRVARP 9
P SRR +RP
Sbjct: 357 PKSRRTSRP 365
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 5 RVARPP 10
RVARPP
Sbjct: 387 RVARPP 392
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 1 PDSRRVARPP 10
PD++ + +PP
Sbjct: 302 PDNQILVQPP 311
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 1 PDSRRVARPP 10
PD++ + PP
Sbjct: 302 PDNQMLIEPP 311
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 PDSRRVARP 9
PDS V RP
Sbjct: 1514 PDSSLVGRP 1522
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 2 DSRRVARPP 10
DSR V R P
Sbjct: 495 DSRDVRRQP 503
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PDSRRVARPP 10
PD+ R PP
Sbjct: 119 PDTSRPTAPP 128
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 PDSRRVARPP 10
PDS A PP
Sbjct: 689 PDSLEEAYPP 698
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 1 PDSRRVARPP 10
PD+ R A PP
Sbjct: 42 PDTVRAALPP 51
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 1 PDSRRVARPP 10
PDS A PP
Sbjct: 689 PDSLEEAYPP 698
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 1 PDSRRVARPP 10
PD+ R A PP
Sbjct: 42 PDTVRAALPP 51
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 4 RRVARPP 10
RRV RPP
Sbjct: 34 RRVLRPP 40
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 4 RRVARPP 10
RRV RPP
Sbjct: 34 RRVLRPP 40
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 4 RRVARPP 10
RRV RPP
Sbjct: 34 RRVLRPP 40
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 DSRRVA 7
DSRRVA
Sbjct: 53 DSRRVA 58
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DSRRVA 7
DSRRVA
Sbjct: 53 DSRRVA 58
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DSRRVA 7
DSRRVA
Sbjct: 53 DSRRVA 58
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 4 RRVARPP 10
RRV RPP
Sbjct: 34 RRVLRPP 40
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 2 DSRRVARP 9
DSRR A P
Sbjct: 487 DSRRSAEP 494
>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61
Query: 1 PDSRRVARP 9
P RR+ARP
Sbjct: 211 PGIRRLARP 219
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 1 PDSRRVARPP 10
PDS A PP
Sbjct: 689 PDSLEEAYPP 698
16|Sequence|76|85|VARPPPIGAE
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RPPPIG 8
RPPP G
Sbjct: 145 RPPPCG 150
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RPPPIG 8
RPPP G
Sbjct: 139 RPPPCG 144
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VARPPPIG 8
V PPP+G
Sbjct: 1482 VPSPPPVG 1489
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VARPPPIG 8
V PPP+G
Sbjct: 1482 VPSPPPVG 1489
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VARPPPIG 8
V PPP+G
Sbjct: 1482 VPSPPPVG 1489
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VARPPPIG 8
V PPP+G
Sbjct: 1482 VPSPPPVG 1489
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VARPPPIG 8
V PPP+G
Sbjct: 1072 VPSPPPVG 1079
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 2 ARPPPIG 8
+RP PIG
Sbjct: 234 SRPSPIG 240
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 2 ARPPPIG 8
+RP PIG
Sbjct: 233 SRPSPIG 239
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 VARPPPIG 8
V PPP+G
Sbjct: 1482 VPSPPPMG 1489
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VARPPPIG 8
V PPP+G
Sbjct: 1482 VPSPPPMG 1489
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 RPPPIGAE 10
RPPP+G E
Sbjct: 793 RPPPLGPE 800
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VARPPPIG 8
V PPP+G
Sbjct: 1482 VPSPPPMG 1489
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 2 ARPPPIG 8
A+PPP G
Sbjct: 131 AQPPPNG 137
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 4 PPPIGA 9
PPP GA
Sbjct: 116 PPPTGA 121
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 4 PPPIGA 9
PPP GA
Sbjct: 117 PPPTGA 122
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 4 PPPIGA 9
PPP GA
Sbjct: 117 PPPTGA 122
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 4 PPPIGA 9
PPP GA
Sbjct: 117 PPPTGA 122
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 5 PPIGA 9
PPIGA
Sbjct: 703 PPIGA 707
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 5 PPIGA 9
PPIGA
Sbjct: 703 PPIGA 707
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 5 PPIGA 9
PPIGA
Sbjct: 703 PPIGA 707
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 RPPPIGA 9
RPPP GA
Sbjct: 263 RPPPSGA 269
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 VARPPPIGA 9
VARP P G
Sbjct: 3093 VARPSPQGG 3101
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 2 ARPPPI 7
+RPPP+
Sbjct: 48 SRPPPV 53
Query: 4 PPPIGA 9
PPP GA
Sbjct: 112 PPPTGA 117
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RPPPIG 8
RPPP+G
Sbjct: 10 RPPPLG 15
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 VARPPPI 7
VARP P+
Sbjct: 1295 VARPEPV 1301
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 2 ARPPPI 7
+RPPP+
Sbjct: 48 SRPPPV 53
Query: 4 PPPIGA 9
PPP GA
Sbjct: 112 PPPTGA 117
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RPPPIG 8
RPPP+G
Sbjct: 10 RPPPLG 15
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RPPPIG 8
RPPP+G
Sbjct: 10 RPPPLG 15
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 4 PPPIGAE 10
PPPI +
Sbjct: 33 PPPISTD 39
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RPPPIG 8
RPPP+G
Sbjct: 10 RPPPLG 15
>sp|VP30_MABVP|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 ARPPP 6
ARPPP
Sbjct: 59 ARPPP 63
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PPPIGA 9
PPP G+
Sbjct: 123 PPPTGS 128
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 ARPPPIGAE 10
A PP GAE
Sbjct: 2872 APEPPAGAE 2880
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 4 PPPIGA 9
PPP G+
Sbjct: 123 PPPTGS 128
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 ARPPPI 7
ARPPP+
Sbjct: 958 ARPPPV 963
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 ARPPPI 7
ARPPP+
Sbjct: 961 ARPPPV 966
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 ARPPPI 7
ARPPP+
Sbjct: 962 ARPPPV 967
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 4 PPPIGAE 10
PPP G E
Sbjct: 420 PPPSGIE 426
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 2 ARPPP 6
A+PPP
Sbjct: 240 AKPPP 244
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 2 ARPPP 6
A+PPP
Sbjct: 240 AKPPP 244
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 4 PPPIG 8
PPP+G
Sbjct: 64 PPPLG 68
>sp|LEAD_ADE05|I-LEADER protein|Human adenovirus C serotype 5
Query: 4 PPPIG 8
PPPIG
Sbjct: 11 PPPIG 15
>sp|US04_HCMVA|UNCHARACTERIZED protein US4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VARPPPI 7
V+RPPP+
Sbjct: 75 VSRPPPL 81
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 4 PPPIGAE 10
PPP G E
Sbjct: 420 PPPSGIE 426
>sp|RPMS1_EBVB9|UNCHARACTERIZED protein RPMS1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 ARPPPI 7
ARPPP+
Sbjct: 20 ARPPPL 25
>sp|UL63_HCMVA|UNCHARACTERIZED protein UL63|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PPPIG 8
PPP+G
Sbjct: 41 PPPVG 45
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 4 PPPIGA 9
PPP GA
Sbjct: 98 PPPTGA 103
17|Sequence|81|90|PIGAEVPDVT
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 1 PIGAEVPDVT 10
PIG +P+V+
Sbjct: 265 PIGEPIPNVS 274
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 PIGAEVP 7
PIG E+P
Sbjct: 891 PIGDEMP 897
>sp|HBZ_HTL1L|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 1 PIGAEVP 7
P+G E P
Sbjct: 64 PVGEEAP 70
>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 3 GAEVPDVT 10
G+EV D+T
Sbjct: 265 GSEVLDIT 272
>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 3 GAEVPDVT 10
G+EV D+T
Sbjct: 265 GSEVLDIT 272
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 IGAEVPDV 9
+GAE P +
Sbjct: 28 LGAETPSI 35
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 IGAEVPDV 9
+GAE P +
Sbjct: 28 LGAETPSI 35
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 IGAEVPDV 9
+GAE P +
Sbjct: 28 LGAETPSI 35
18|Sequence|86|95|VPDVTATPAR
>sp|DUT_HHV2H|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 2 (strain
Query: 1 VPDVTATP 8
VPD TATP
Sbjct: 331 VPDATATP 338
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 PDVTATPAR 10
P+V+ TP R
Sbjct: 178 PEVSLTPYR 186
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 3 DVTATPAR 10
D+T+ PAR
Sbjct: 519 DLTSQPAR 526
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 3 DVTATPAR 10
D+T+ PAR
Sbjct: 519 DLTSQPAR 526
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 PDVTATPA 9
PD T+TP+
Sbjct: 157 PDETSTPS 164
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 2 PDVTATP 8
PDV TP
Sbjct: 225 PDVCTTP 231
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VPDVTATP 8
VP+ T TP
Sbjct: 501 VPEQTGTP 508
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 PDVTATPA 9
P+V ATP+
Sbjct: 1690 PEVVATPS 1697
19|Sequence|91|100|ATPARLLFFA
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 PARLLFFA 10
P RLL++A
Sbjct: 90 PERLLYYA 97
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 1 ATPARLLFFA 10
ATP L +FA
Sbjct: 336 ATPYDLQYFA 345
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 ATPARLLFF 9
ATP +L+F
Sbjct: 1897 ATPQSVLYF 1905
20|Sequence|96|105|LLFFAPTRRA
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 1 LLFFAPTRR 9
LL F+PT+R
Sbjct: 37 LLKFSPTKR 45
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 1 LLFFAPTRR 9
LL F+PT+R
Sbjct: 37 LLKFSPTKR 45
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 1 LLFFAPTRR 9
LL F+PT+R
Sbjct: 37 LLKFSPTKR 45
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 5 APTRRA 10
APTRRA
Sbjct: 674 APTRRA 679
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 LLFFAPTRRA 10
+LF PT++A
Sbjct: 1139 VLFCTPTKKA 1148
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 LLFFAPTRRA 10
+LF PT++A
Sbjct: 1139 VLFCTPTKKA 1148
>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2
Query: 2 LFFAPTRRA 10
L +AP+RRA
Sbjct: 368 LRWAPSRRA 376
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 2 LFFAPTRRA 10
L +AP+RRA
Sbjct: 368 LRWAPSRRA 376
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 5 APTRRA 10
APT+RA
Sbjct: 674 APTKRA 679
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 LLFFAP 6
LLFF P
Sbjct: 846 LLFFGP 851
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 LLFFAP 6
LLFF P
Sbjct: 846 LLFFGP 851
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 LLFFAP 6
LLFF P
Sbjct: 845 LLFFGP 850
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 APTRRA 10
APTRRA
Sbjct: 2024 APTRRA 2029
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 5 APTRRA 10
APTRRA
Sbjct: 1997 APTRRA 2002
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 5 APTRRA 10
APTRRA
Sbjct: 2002 APTRRA 2007
21|Sequence|101|110|PTRRAAPLEE
>sp|PG082_MONPV|TELOMERE-BINDING protein OPG082|Monkeypox virus (MPXV)
Query: 1 PTRRAAPLEE 10
PT++ +PL+E
Sbjct: 15 PTKKLSPLDE 24
>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)
Query: 1 PTRRAAPLEE 10
PT+ AA L+E
Sbjct: 66 PTKSAAELQE 75
>sp|U17_HHV6U|PROTEIN U17|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PTRRAAPLEE 10
PT+ AA L+E
Sbjct: 66 PTKSAAELQE 75
>sp|U16_HHV6U|PROTEIN U17/U16|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PTRRAAPLEE 10
PT+ AA L+E
Sbjct: 66 PTKSAAELQE 75
>sp|U16_HHV6G|PROTEIN U17/U16|Human herpesvirus 6A (strain GS)
Query: 1 PTRRAAPLEE 10
PT+ AA L+E
Sbjct: 66 PTKSAAELQE 75
>sp|U17_HHV6G|PROTEIN U17|Human herpesvirus 6A (strain GS)
Query: 1 PTRRAAPLEE 10
PT+ AA L+E
Sbjct: 66 PTKSAAELQE 75
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 1 PTRRAAP 7
PT+R AP
Sbjct: 42 PTKRTAP 48
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 1 PTRRAAP 7
PT+R AP
Sbjct: 42 PTKRTAP 48
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 1 PTRRAAPL 8
P RR+AP+
Sbjct: 3 PPRRSAPI 10
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 4 RAAPLEE 10
RAAPL+E
Sbjct: 308 RAAPLQE 314
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 2 TRRAAPLE 9
RRA PLE
Sbjct: 286 VRRAQPLE 293
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 2 TRRAAPLE 9
RRA PLE
Sbjct: 286 VRRARPLE 293
22|Sequence|106|115|APLEEMEAPA
>sp|UXP_ADE02|U exon protein|Human adenovirus C serotype 2
Query: 1 APLEEMEAPA 10
APL + APA
Sbjct: 173 APLSQARAPA 182
23|Sequence|111|120|MEAPAADAIM
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 EAPAADAI 9
E PA DAI
Sbjct: 1458 ETPAPDAI 1465
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 EAPAADAI 9
E PA DAI
Sbjct: 1454 EKPAPDAI 1461
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 EAPAADAI 9
E PA DAI
Sbjct: 1454 EKPAPDAI 1461
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 EAPAADAI 9
E PA DAI
Sbjct: 1454 EKPAPDAI 1461
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 EAPAADAI 9
E PA DAI
Sbjct: 1454 EKPAPDAI 1461
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 EAPAADAI 9
E PA DAI
Sbjct: 1454 EKPAPDAI 1461
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 2 EAPAADAI 9
+APAAD I
Sbjct: 238 KAPAADTI 245
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 2 EAPAADAI 9
+APAAD I
Sbjct: 237 KAPAADTI 244
24|Sequence|116|125|ADAIMSPEEE
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 DAIMSPEEE 10
DA++ P+EE
Sbjct: 338 DAVVPPKEE 346
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 DAIMSPEEE 10
DA++ P+EE
Sbjct: 338 DAVVPPKEE 346
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DAIMSPEEE 10
DA++ P+EE
Sbjct: 338 DAVVPPKEE 346
25|Sequence|121|130|SPEEELDGYE
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 PEEELDGY 9
P+E++DGY
Sbjct: 6990 PKEQIDGY 6997
Query: 3 EEELDGY 9
E +LDGY
Sbjct: 1870 EPKLDGY 1876
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 PEEELDGY 9
P E++DGY
Sbjct: 7013 PREQIDGY 7020
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 SPEEELDG 8
SP +E+DG
Sbjct: 1169 SPSQEVDG 1176
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 EEELDGY 9
E +LDGY
Sbjct: 1870 EPKLDGY 1876
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 1 SPEEEL 6
SPEE+L
Sbjct: 233 SPEEQL 238
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 1 SPEEEL 6
SPEE+L
Sbjct: 230 SPEEQL 235
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SPEEELDGY 9
SP LD Y
Sbjct: 344 SPRANLDAY 352
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SPEEELDGY 9
SP LD Y
Sbjct: 344 SPRANLDAY 352
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 2 PEEELDGYE 10
PEE+ D Y+
Sbjct: 447 PEEDTDPYK 455
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 EEELDG 8
EE+LDG
Sbjct: 694 EEDLDG 699
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 EEELDG 8
EE+LDG
Sbjct: 694 EEDLDG 699
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 EEELDG 8
EE+LDG
Sbjct: 694 EEDLDG 699
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 SPEEELD 7
SPE+EL+
Sbjct: 383 SPEKELE 389
26|Sequence|126|135|LDGYEPEPLG
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LDGYEPEP 8
LDGY P P
Sbjct: 286 LDGYNPHP 293
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LDGYEPEP 8
LDGY P P
Sbjct: 286 LDGYNPHP 293
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 3 GYEPEP 8
GY+PEP
Sbjct: 456 GYDPEP 461
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 4 YEPEPL 9
Y+PEPL
Sbjct: 1409 YDPEPL 1414
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 4 YEPEPL 9
Y+PEPL
Sbjct: 1409 YDPEPL 1414
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 4 YEPEPL 9
Y+PEPL
Sbjct: 1409 YDPEPL 1414
>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4
Query: 2 DGYEPEPLG 10
DG++ +PLG
Sbjct: 37 DGFQEKPLG 45
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 GYEPEPL 9
GYEPE +
Sbjct: 179 GYEPEDI 185
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 4 YEPEPLG 10
Y+P+PL
Sbjct: 1407 YDPDPLA 1413
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 LDGYEPEPLG 10
L+G P+P G
Sbjct: 1580 LEGQRPDPPG 1589
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 GYEPEPL 9
GY P PL
Sbjct: 835 GYAPRPL 841
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 YEPEPL 9
++PEPL
Sbjct: 61 HQPEPL 66
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 4 YEPEPL 9
Y P+PL
Sbjct: 230 YRPQPL 235
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 4 YEPEPL 9
Y P+PL
Sbjct: 230 YRPQPL 235
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 DGYEPEPLG 10
D Y PLG
Sbjct: 727 DAYREHPLG 735
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 1 LDGYEPEPLG 10
L+G P P G
Sbjct: 48 LEGQNPRPFG 57
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 1 LDGYEPEP 8
LDG +P P
Sbjct: 10 LDGQKPGP 17
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 4 YEPEPL 9
Y PEP+
Sbjct: 1192 YAPEPI 1197
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DGYEPEPLG 10
D Y PLG
Sbjct: 727 DAYREHPLG 735
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DGYEPEPLG 10
D Y PLG
Sbjct: 727 DAYREHPLG 735
>sp|VE2_HPV5B|REGULATORY protein E2|Human papillomavirus type 5b
Query: 3 GYEPEPL 9
GY+P P+
Sbjct: 55 GYQPVPV 61
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 3 GYEPEPL 9
GY+P P+
Sbjct: 55 GYQPVPV 61
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 1 LDGYE 5
LDGYE
Sbjct: 99 LDGYE 103
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 LDGYEPEP 8
L YEP P
Sbjct: 356 LPSYEPTP 363
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 229 VDGFEP 234
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 3 GYEPEPL 9
GY+P P+
Sbjct: 55 GYQPVPV 61
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 YEPEPL 9
++PEPL
Sbjct: 40 HQPEPL 45
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 104 IDGFEP 109
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 226 VDGFEP 231
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 210 VDGFEP 215
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 LDGYEPEP 8
L YEP P
Sbjct: 356 LPNYEPTP 363
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 233 VDGFEP 238
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 3 GYEPEP 8
GY+P P
Sbjct: 55 GYQPVP 60
>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47
Query: 3 GYEPEP 8
GY+P P
Sbjct: 55 GYQPVP 60
>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5
Query: 3 GYEPEPL 9
GY+P P+
Sbjct: 55 GYQPVPV 61
>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27
Query: 1 LDGYEPEPLG 10
LD Y P P G
Sbjct: 362 LDDYYPAPRG 371
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 3 GYEPEP 8
GY+P P
Sbjct: 55 GYQPVP 60
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 4 YEPEPLG 10
++P+P+G
Sbjct: 464 HDPQPVG 470
>sp|VE2_HPV37|REGULATORY protein E2|Human papillomavirus 37
Query: 3 GYEPEP 8
GY+P P
Sbjct: 55 GYQPVP 60
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 104 IDGFEP 109
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 104 IDGFEP 109
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 104 IDGFEP 109
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 1 LDGYEP 6
+DG+EP
Sbjct: 104 IDGFEP 109
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 4 YEPEPLG 10
++P+P+G
Sbjct: 464 HDPQPVG 470
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 3 GYEPEP 8
GY+P P
Sbjct: 55 GYQPVP 60
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 3 GYEPEP 8
GY+P P
Sbjct: 55 GYQPVP 60
27|Sequence|131|140|PEPLGKRPAV
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 PEPLGKR 7
P PLG+R
Sbjct: 446 PIPLGRR 452
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 PEPLGKR 7
P PLG+R
Sbjct: 446 PIPLGRR 452
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 PEPLGKR 7
P PLG+R
Sbjct: 446 PIPLGRR 452
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 PEPLGKR 7
P PLG+R
Sbjct: 446 PIPLGRR 452
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 PEPLGKR 7
P PLG+R
Sbjct: 446 PIPLGRR 452
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 PEPLGKR 7
P PLG+R
Sbjct: 446 PIPLGRR 452
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 PEPLGKR 7
P PLG+R
Sbjct: 446 PIPLGRR 452
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 PEPLGKR 7
P PLG+R
Sbjct: 446 PIPLGRR 452
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 PEPLGKR 7
P PLG+R
Sbjct: 446 PIPLGRR 452
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 1 PEPLGKR 7
P PLG+R
Sbjct: 451 PIPLGRR 457
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 PEPLGKR 7
P PLG+R
Sbjct: 446 PIPLGRR 452
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 PEPLGKR 7
P PLG+R
Sbjct: 446 PIPLGRR 452
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 PEPLGKR 7
P PLG+R
Sbjct: 446 PIPLGRR 452
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 PEPLGKR 7
P PLG+R
Sbjct: 446 PIPLGRR 452
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 1 PEPLGKR 7
P PLG+R
Sbjct: 446 PIPLGRR 452
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 EPLGKRPAV 10
EP K+PAV
Sbjct: 2006 EPKFKKPAV 2014
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 EPLGKRPAV 10
EP K+PAV
Sbjct: 2006 EPKFKKPAV 2014
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 EPLGKRP 8
+P+ KRP
Sbjct: 329 QPINKRP 335
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 EPLGKRP 8
+P+ KRP
Sbjct: 325 QPINKRP 331
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 EPLGKRP 8
+P+ KRP
Sbjct: 327 QPINKRP 333
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 PEPLGKRPA 9
P P G RP+
Sbjct: 98 PSPRGSRPS 106
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 5 GKRPAV 10
GKRPAV
Sbjct: 232 GKRPAV 237
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 1 PEPLGKRPAV 10
PEP RPA
Sbjct: 491 PEPCAGRPAT 500
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 PEPLGKRP 8
P P+ RP
Sbjct: 176 PHPVSNRP 183
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 PEPLGKRP 8
P P KRP
Sbjct: 1495 PNPQTKRP 1502
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 1 PEPLGKRP 8
P PLG+ P
Sbjct: 64 PPPLGRIP 71
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 PEPLGKRPAV 10
P+P+ K+P +
Sbjct: 1533 PKPILKKPVL 1542
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PEPLGKRPA 9
PE G++PA
Sbjct: 2568 PEKGGRKPA 2576
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PEPLGKRPA 9
PE G++PA
Sbjct: 2569 PEKGGRKPA 2577
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PEPLGKRPA 9
PE G++PA
Sbjct: 2568 PEKGGRKPA 2576
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PEPLGKRPA 9
PE G++PA
Sbjct: 2568 PEKGGRKPA 2576
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PEPLGKRPA 9
PE G++PA
Sbjct: 2568 PEKGGRKPA 2576
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PEPLGKRPA 9
PE G++PA
Sbjct: 2568 PEKGGRKPA 2576
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PEPLGKRPA 9
PE G++PA
Sbjct: 2569 PEKGGRKPA 2577
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PEPLGKRPA 9
PE G++PA
Sbjct: 2568 PEKGGRKPA 2576
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PEPLGKRPA 9
PE G++PA
Sbjct: 2569 PEKGGRKPA 2577
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PEPLGKRPA 9
PE G++PA
Sbjct: 2569 PEKGGRKPA 2577
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PEPLGKRPA 9
PE G++PA
Sbjct: 2569 PEKGGRKPA 2577
28|Sequence|136|145|KRPAVLPLLE
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 1 KRPAVLPLLE 10
KRP +LP+ E
Sbjct: 409 KRPKLLPVEE 418
>sp|PG068_VARV|PROTEIN OPG068|Variola virus
Query: 1 KRPAVLPLL 9
K P+VLP L
Sbjct: 505 KNPSVLPSL 513
>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 KRPAVLPLL 9
K P+VLP L
Sbjct: 505 KNPSVLPSL 513
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 3 PAVLPLLE 10
PA+LPLL+
Sbjct: 240 PAILPLLD 247
>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)
Query: 3 PAVLPLLE 10
PA+LPLL+
Sbjct: 240 PAILPLLD 247
>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KRPAVLPLL 9
K P++LP L
Sbjct: 505 KNPSILPSL 513
>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)
Query: 1 KRPAVLPLL 9
K P++LP L
Sbjct: 505 KNPSILPSL 513
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 2 RPAVLP 7
RP VLP
Sbjct: 201 RPGVLP 206
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RPAVLP 7
RPAV+P
Sbjct: 1691 RPAVIP 1696
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 RPAVLP 7
RPAV+P
Sbjct: 1695 RPAVIP 1700
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 PAVLPLLE 10
PA+ PLLE
Sbjct: 422 PALAPLLE 429
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PAVLPLLE 10
PA+ PLLE
Sbjct: 422 PALAPLLE 429
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PAVLPLLE 10
PA+ PLLE
Sbjct: 422 PALAPLLE 429
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RPAVLP 7
RPAV+P
Sbjct: 1691 RPAVIP 1696
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RPAVLP 7
RPAV+P
Sbjct: 1691 RPAVVP 1696
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RPAVLP 7
RPA++P
Sbjct: 1691 RPAIIP 1696
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 RPAVLP 7
RPA++P
Sbjct: 1692 RPAIIP 1697
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 KRPAVLP 7
+RP+V+P
Sbjct: 1213 QRPSVIP 1219
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 KRPAVLP 7
+RP+V+P
Sbjct: 1213 QRPSVIP 1219
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 KRPAVLP 7
+RP+V+P
Sbjct: 1213 QRPSVIP 1219
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 KRPAVLP 7
+RP+V+P
Sbjct: 1211 QRPSVIP 1217
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 KRPAVLP 7
+RP+V+P
Sbjct: 1213 QRPSVIP 1219
>sp|E1BS_ADE05|E1B protein, small T-antigen|Human adenovirus C serotype 5
Query: 2 RPAVLP 7
RPA++P
Sbjct: 140 RPAIIP 145
>sp|E1BS_ADE02|E1B protein, small T-antigen|Human adenovirus C serotype 2
Query: 2 RPAVLP 7
RPA++P
Sbjct: 140 RPAIIP 145
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RPAVLP 7
RPA++P
Sbjct: 1691 RPAIVP 1696
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 KRPAVLP 7
+RP+V+P
Sbjct: 1213 QRPSVIP 1219
>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23
Query: 2 RPAVLP 7
RPAV+P
Sbjct: 86 RPAVIP 91
29|Sequence|141|150|LPLLELVGES
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 2 PLLELVG 8
PLLE++G
Sbjct: 115 PLLEIIG 121
>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LPLLELVGES 10
LP +EL+G S
Sbjct: 126 LPFVELLGIS 135
>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LPLLELVGES 10
LP +EL+G S
Sbjct: 126 LPFVELLGIS 135
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 1 LPLLELV 7
LPLLE++
Sbjct: 312 LPLLEIL 318
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 2 PLLELVG 8
PLL+L+G
Sbjct: 667 PLLQLLG 673
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 2 PLLELVG 8
PLL+L+G
Sbjct: 667 PLLQLLG 673
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 PLLELVG 8
PLL+L+G
Sbjct: 667 PLLQLLG 673
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 LPLLELVGES 10
LP+LE+ S
Sbjct: 19 LPVLEIASNS 28
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 2 PLLELVGES 10
P+++L GE+
Sbjct: 291 PIIQLEGEA 299
>sp|VE4_HPV16|PROTEIN E4|Human papillomavirus type 16
Query: 2 PLLELVGES 10
PLL+L+G +
Sbjct: 11 PLLKLLGST 19
30|Sequence|146|155|LVGESGNNTS
>sp|PG031_VACCC|PROTEIN C4|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 ESGNNT 9
ESGNNT
Sbjct: 256 ESGNNT 261
>sp|PG031_MONPV|PROTEIN OPG031|Monkeypox virus (MPXV)
Query: 4 ESGNNT 9
ESGNNT
Sbjct: 256 ESGNNT 261
>sp|PG031_VAR67|PROTEIN C4|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 ESGNNT 9
ESGNNT
Sbjct: 256 ESGNNT 261
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 ESGNNTS 10
ESG NTS
Sbjct: 989 ESGKNTS 995
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 2 VGESGNNTS 10
VGE GN+ +
Sbjct: 80 VGEQGNDDT 88
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GESGNNTS 10
GESG N +
Sbjct: 897 GESGQNVT 904
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 GESGNNTS 10
GESG N +
Sbjct: 887 GESGQNVT 894
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VGESGN 7
VGE+GN
Sbjct: 305 VGETGN 310
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VGESGN 7
VGE+GN
Sbjct: 305 VGETGN 310
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VGESGN 7
VGE+GN
Sbjct: 305 VGETGN 310
>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VGESGNNTS 10
VGE N TS
Sbjct: 179 VGEFANETS 187
>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain AD169)
Query: 2 VGESGNNTS 10
VGE N TS
Sbjct: 177 VGEFANETS 185
>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)
Query: 3 GESGNNT 9
G+S NNT
Sbjct: 46 GQSKNNT 52
>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GESGNNT 9
G+S NNT
Sbjct: 46 GQSKNNT 52
>sp|PG181_VACCA|PROTEIN OPG181|Vaccinia virus (strain Ankara) (VACV)
Query: 3 GESGNNT 9
G+S NNT
Sbjct: 42 GQSKNNT 48
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 3 GESGNNT 9
G+S NNT
Sbjct: 46 GQSKNNT 52
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 GESGNNT 9
G+S NNT
Sbjct: 46 GQSKNNT 52
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GESGNNT 9
GE+GN T
Sbjct: 431 GENGNKT 437
31|Sequence|151|160|GNNTSTDGSL
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 1 GNNTSTDGS 9
GNN+S DG+
Sbjct: 175 GNNSSVDGT 183
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 2 NNTSTDGSL 10
NN STD +L
Sbjct: 411 NNVSTDDNL 419
>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GNNTSTDGSL 10
GN+T TD L
Sbjct: 232 GNHTDTDTRL 241
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 NTSTDGSL 10
N +TDG+L
Sbjct: 364 NEATDGTL 371
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 3 NTSTDGSL 10
N +TDG+L
Sbjct: 364 NEATDGTL 371
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 NTSTDGSL 10
N +TDG+L
Sbjct: 364 NEATDGTL 371
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 3 NTSTDGSL 10
N +TDG+L
Sbjct: 364 NEATDGTL 371
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 GNNTSTD 7
GN+TS+D
Sbjct: 68 GNSTSSD 74
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 4 TSTDGSL 10
++TDGSL
Sbjct: 1527 STTDGSL 1533
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 GNNTSTD 7
GN+TS+D
Sbjct: 68 GNSTSSD 74
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 GNNTSTD 7
GN+TS+D
Sbjct: 68 GNSTSSD 74
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 GNNTSTD 7
GNN +TD
Sbjct: 181 GNNVTTD 187
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 GNNTSTDGSL 10
GN++ DG+L
Sbjct: 2004 GNHSLLDGAL 2013
>sp|PG135_VACCC|VIRION membrane protein OPG135|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 NTSTDGS 9
NT+ DGS
Sbjct: 76 NTNNDGS 82
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GNNTSTDGSL 10
GNN+ST+ L
Sbjct: 186 GNNSSTEYRL 195
32|Sequence|156|165|TDGSLPSTPP
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 TDGSLPSTPP 10
TDG LP P
Sbjct: 196 TDGGLPGIRP 205
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 1 TDGSLPST 8
+DGS+P+T
Sbjct: 209 SDGSVPTT 216
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 DGSLPSTPP 10
D +LP TPP
Sbjct: 442 DLALPWTPP 450
>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)
Query: 2 DGSLPSTPP 10
DG PST P
Sbjct: 33 DGYFPSTIP 41
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 DGSLPSTP 9
DG LP P
Sbjct: 1308 DGKLPGDP 1315
>sp|US15_HCMVM|MEMBRANE protein US15|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TDGSLPSTPP 10
TDG++ PP
Sbjct: 11 TDGTVIYVPP 20
>sp|US15_HCMVA|UNCHARACTERIZED protein HVLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TDGSLPSTPP 10
TDG++ PP
Sbjct: 11 TDGTVIYVPP 20
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 5 LPSTPP 10
LPSTPP
Sbjct: 1054 LPSTPP 1059
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 2 DGSLPSTPP 10
DG LP T P
Sbjct: 534 DGHLPDTIP 542
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 GSLPSTPP 10
G++PS PP
Sbjct: 468 GAIPSAPP 475
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 2 DGSLPSTPP 10
DG P PP
Sbjct: 947 DGGFPLPPP 955
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DGSLPSTPP 10
DG P PP
Sbjct: 947 DGGFPLPPP 955
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 DGSLPSTPP 10
DGS S PP
Sbjct: 2386 DGSYSSMPP 2394
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 DGSLPSTPP 10
DGS S PP
Sbjct: 2382 DGSYSSMPP 2390
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 2 DGSLPST 8
DG+LP+T
Sbjct: 122 DGNLPAT 128
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 1 TDGSLPST 8
TD +PST
Sbjct: 206 TDAEIPST 213
>sp|VE8E2_HPV39|PROTEIN E8^E2C|Human papillomavirus 39
Query: 1 TDGSLPST 8
+DGS+P+T
Sbjct: 14 SDGSVPTT 21
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 2 DGSLPST 8
DG LP+T
Sbjct: 134 DGKLPTT 140
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 2 DGSLPST 8
DG LP+T
Sbjct: 134 DGRLPTT 140
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 GSLPSTPP 10
GSL S PP
Sbjct: 2387 GSLSSMPP 2394
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 GSLPSTPP 10
GSL S PP
Sbjct: 2387 GSLSSMPP 2394
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DGSLPST 8
DG LP+T
Sbjct: 250 DGKLPAT 256
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 DGSLPST 8
DG LP+T
Sbjct: 250 DGKLPAT 256
33|Sequence|161|170|PSTPPPAEEE
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 1 PSTPPPAEE 9
PS+PPP +
Sbjct: 246 PSSPPPKRQ 254
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 PSTPPPA 7
PSTPP A
Sbjct: 660 PSTPPAA 666
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 PSTPPPA 7
PSTPP A
Sbjct: 660 PSTPPAA 666
>sp|Z_LYCVA|RING finger protein Z|Lymphocytic choriomeningitis virus (strain
Query: 1 PSTPPPAEE 9
PS+PPP EE
Sbjct: 82 PSSPPPYEE 90
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 PSTPPPAE 8
PS PPPAE
Sbjct: 722 PSMPPPAE 729
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 PSTPPP 6
P TPPP
Sbjct: 685 PKTPPP 690
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 4 PPPAEE 9
PPP+E+
Sbjct: 21 PPPSED 26
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 PSTPPP 6
P TPPP
Sbjct: 689 PKTPPP 694
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 2 STPPPAEE 9
STPPP ++
Sbjct: 43 STPPPEDK 50
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 PPPAEE 9
PPP E+
Sbjct: 6048 PPPGEQ 6053
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 2 STPPPAEEE 10
STPPP +E+
Sbjct: 35 STPPPDDED 43
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 1 PSTPPPAE 8
PS+PPP E
Sbjct: 579 PSSPPPLE 586
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 TPPPAE 8
TPPP +
Sbjct: 267 TPPPKD 272
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 TPPPAE 8
TPPP +
Sbjct: 267 TPPPKD 272
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 TPPPAE 8
TPPP +
Sbjct: 267 TPPPKD 272
>sp|HBSAG_HBVC0|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 PSTPPPAEEE 10
P+TPPPA
Sbjct: 89 PATPPPASTN 98
>sp|U24_HHV6Z|U24 protein|Human herpesvirus 6B (strain Z29)
Query: 1 PSTPPPAEEE 10
P TPPP+ E
Sbjct: 4 PRTPPPSYSE 13
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 STPPPAEE 9
STPPP ++
Sbjct: 43 STPPPEDK 50
>sp|CAHH_VACCT|CELL surface-binding protein OPG105|Vaccinia virus (strain Tian Tan)
Query: 2 STPPPAEE 9
+T PPA E
Sbjct: 241 ATTPPARE 248
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 1 PSTPPP 6
P TPPP
Sbjct: 236 PCTPPP 241
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 2 STPPPAEE 9
S PPPA+E
Sbjct: 223 SQPPPADE 230
>sp|VE8E2_HPV57|PROTEIN E8^E2C|Human papillomavirus 57
Query: 1 PSTPPPAEE 9
PS+PPP +
Sbjct: 55 PSSPPPKRQ 63
>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 2 STPPP 6
+TPPP
Sbjct: 269 NTPPP 273
>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)
Query: 2 STPPP 6
+TPPP
Sbjct: 269 NTPPP 273
>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12
Query: 1 PSTPPPAEE 9
P TPPP+ E
Sbjct: 13 PETPPPSYE 21
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 1 PSTPPPAEEE 10
P PP E+E
Sbjct: 445 PDKTPPKEKE 454
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 PSTPPPAEE 9
PSTP PA
Sbjct: 2077 PSTPVPAHN 2085
>sp|U24_HHV6U|U24 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PSTPPPAEEE 10
P TPPP+ E
Sbjct: 4 PRTPPPSYSE 13
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 1 PSTPPPAEEE 10
P PP E+E
Sbjct: 454 PDKNPPKEKE 463
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 1 PSTPPPAEEE 10
P PP E+E
Sbjct: 445 PDKNPPKEKE 454
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PSTPPPAEE 9
P+TP P+++
Sbjct: 485 PNTPIPSKK 493
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 3 TPPPAE 8
TPPPA+
Sbjct: 1225 TPPPAD 1230
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 PSTPPPA 7
P TPP A
Sbjct: 530 PQTPPTA 536
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PSTPPPAEE 9
P+TP P+++
Sbjct: 485 PNTPIPSKK 493
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 3 TPPPAE 8
TPPPA+
Sbjct: 1225 TPPPAD 1230
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PSTPPPAEE 9
PS PP +E
Sbjct: 480 PSNPPGFDE 488
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PSTPPPAEE 9
P+TP P+++
Sbjct: 485 PNTPIPSKK 493
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PSTPPPAEE 9
P+TP P+++
Sbjct: 485 PNTPIPSKK 493
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PSTPPPAEE 9
PS PP +E
Sbjct: 480 PSNPPGFDE 488
>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)
Query: 1 PSTPPPAE 8
P+ PPPA+
Sbjct: 417 PTAPPPAD 424
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PSTPPPAEE 9
P+TP P+++
Sbjct: 485 PNTPIPSKK 493
34|Sequence|166|175|PAEEEEDELY
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 EEEDELY 10
EE+DE+Y
Sbjct: 4887 EEQDEIY 4893
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PAEEEEDE 8
P +EEED+
Sbjct: 2259 PLKEEEDD 2266
>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 AEEEEDELY 10
+EE+ED+ Y
Sbjct: 335 SEEDEDDDY 343
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 PAEEEEDE 8
PA++E+DE
Sbjct: 2439 PADDEQDE 2446
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 PAEEEEDE 8
PA++E+DE
Sbjct: 2441 PADDEQDE 2448
>sp|VE7_HPV63|PROTEIN E7|Human papillomavirus type 63
Query: 1 PAEEEEDE 8
PAEEEE E
Sbjct: 29 PAEEEESE 36
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 1 PAEEEED 7
PA+E+ED
Sbjct: 427 PAKEKED 433
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 PAEEEEDE 8
P EE+E++
Sbjct: 971 PEEEQEED 978
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PAEEEEDE 8
P EE+E++
Sbjct: 971 PEEEQEED 978
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 EEEDELY 10
+E+DEL+
Sbjct: 4900 QEQDELF 4906
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 AEEEEDE 8
AEEEEDE
Sbjct: 54 AEEEEDE 60
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 EEEDELY 10
EE++E+Y
Sbjct: 4925 EEQNEIY 4931
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 EEEDELY 10
EE++E+Y
Sbjct: 4945 EEQNEIY 4951
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 EEEDELY 10
EE++E+Y
Sbjct: 4975 EEQNEIY 4981
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 PAEEEED 7
P EEE D
Sbjct: 1795 PTEEESD 1801
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 AEEEEDELY 10
E+E +ELY
Sbjct: 2147 GEQEYEELY 2155
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 4 EEEDEL 9
E+EDEL
Sbjct: 1564 EQEDEL 1569
35|Sequence|171|180|EDELYRQSLE
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 DELYRQSLE 10
DEL+R SLE
Sbjct: 1954 DELFRMSLE 1962
>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G
Query: 4 LYRQSLE 10
LYR+SLE
Sbjct: 49 LYRESLE 55
>sp|CAPSD_HBVG2|CAPSID protein|Hepatitis B virus genotype G
Query: 4 LYRQSLE 10
LYR+SLE
Sbjct: 49 LYRESLE 55
>sp|CAPSD_HBVG1|CAPSID protein|Hepatitis B virus genotype G
Query: 4 LYRQSLE 10
LYR+SLE
Sbjct: 49 LYRESLE 55
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 EDELYRQSLE 10
EDE++ SLE
Sbjct: 699 EDEVFSNSLE 708
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 1 EDELYRQSLE 10
EDE++ SLE
Sbjct: 721 EDEVFSNSLE 730
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 EDELYRQSLE 10
EDE++ SLE
Sbjct: 694 EDEVFSNSLE 703
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 DELYRQS 8
DELYR S
Sbjct: 553 DELYRSS 559
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DELYRQS 8
DELYR S
Sbjct: 553 DELYRSS 559
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 DELYRQS 8
DELYR S
Sbjct: 553 DELYRSS 559
>sp|PG045_VARV|APOPTOSIS regulator OPG045|Variola virus
Query: 2 DELYRQ 7
D+LYRQ
Sbjct: 91 DDLYRQ 96
>sp|PG045_VACCA|APOPTOSIS regulator OPG045|Vaccinia virus (strain Ankara) (VACV)
Query: 2 DELYRQ 7
D+LYRQ
Sbjct: 76 DDLYRQ 81
>sp|PG045_VACCC|APOPTOSIS regulator OPG045|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DELYRQ 7
D+LYRQ
Sbjct: 80 DDLYRQ 85
>sp|PG045_VACCT|APOPTOSIS regulator OPG045|Vaccinia virus (strain Tian Tan)
Query: 2 DELYRQ 7
D+LYRQ
Sbjct: 80 DDLYRQ 85
>sp|PG045_VACCP|APOPTOSIS regulator OPG045|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 DELYRQ 7
D+LYRQ
Sbjct: 80 DDLYRQ 85
>sp|PG045_MONPV|APOPTOSIS regulator OPG045|Monkeypox virus (MPXV)
Query: 2 DELYRQ 7
D+LYRQ
Sbjct: 74 DDLYRQ 79
>sp|NEP_I50A0|NUCLEAR export protein|Influenza A virus (strain A/Fort
Query: 3 ELYRQSLE 10
+LYR SLE
Sbjct: 39 KLYRDSLE 46
36|Sequence|176|185|RQSLEIISRY
***** No hits found ******
37|Sequence|181|190|IISRYLREQA
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ISRYLREQ 9
I RYLR+Q
Sbjct: 554 IERYLRDQ 561
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 IISRYLR 7
IISRYLR
Sbjct: 3896 IISRYLR 3902
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ISRYLREQA 10
I +YLR+QA
Sbjct: 574 IEKYLRDQA 582
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ISRYLREQ 9
I RYLR+Q
Sbjct: 561 IERYLRDQ 568
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ISRYLREQ 9
I RYLR+Q
Sbjct: 576 IERYLRDQ 583
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ISRYLREQ 9
+ RYLR+Q
Sbjct: 592 VERYLRDQ 599
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ISRYLREQ 9
+ RYLR+Q
Sbjct: 579 VERYLRDQ 586
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ISRYLREQ 9
+ RYLR+Q
Sbjct: 572 VERYLRDQ 579
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ISRYLREQ 9
+ RYLR+Q
Sbjct: 583 VERYLRDQ 590
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ISRYLREQ 9
+ RYLR+Q
Sbjct: 570 VERYLRDQ 577
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ISRYLREQ 9
+ RYLR+Q
Sbjct: 574 VERYLRDQ 581
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ISRYLREQ 9
+ RYLR+Q
Sbjct: 583 VERYLRDQ 590
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ISRYLREQ 9
+ RYLR+Q
Sbjct: 582 VERYLRDQ 589
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ISRYLREQ 9
+ RYLR+Q
Sbjct: 573 VERYLRDQ 580
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ISRYLREQ 9
+ RYLR+Q
Sbjct: 578 VERYLRDQ 585
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ISRYLREQA 10
I +YL++QA
Sbjct: 572 IEKYLKDQA 580
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ISRYLREQA 10
I +YL++QA
Sbjct: 573 IEKYLKDQA 581
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ISRYLREQA 10
I +YL++QA
Sbjct: 576 IEKYLKDQA 584
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ISRYLREQ 9
+ RYLR+Q
Sbjct: 580 LERYLRDQ 587
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ISRYLREQA 10
I +YL++QA
Sbjct: 584 IEKYLKDQA 592
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ISRYLREQA 10
I +YL++QA
Sbjct: 585 IEKYLKDQA 593
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ISRYLREQA 10
I +YL++QA
Sbjct: 583 IEKYLKDQA 591
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IISRYLREQ 9
I+S YLR+Q
Sbjct: 250 ILSNYLRKQ 258
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ISRYLREQA 10
I +YL++QA
Sbjct: 576 IEKYLKDQA 584
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ISRYLREQA 10
I +YL++QA
Sbjct: 573 IEKYLKDQA 581
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ISRYLREQA 10
I +YL++QA
Sbjct: 580 IEKYLKDQA 588
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 3 SRYLREQA 10
+RYLRE A
Sbjct: 359 ARYLRECA 366
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ISRYLREQ 9
I R+LR+Q
Sbjct: 571 IERHLRDQ 578
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ISRYLREQA 10
I +YL++QA
Sbjct: 582 IEKYLQDQA 590
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 ISRYLREQA 10
+S+Y+RE++
Sbjct: 1202 LSKYVRERS 1210
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 ISRYLREQA 10
+S+Y+RE++
Sbjct: 1202 LSKYVRERS 1210
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 ISRYLREQA 10
+S+Y+RE++
Sbjct: 1202 LSKYVRERS 1210
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 ISRYLRE 8
IS+YLR+
Sbjct: 1787 ISKYLRQ 1793
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 ISRYLRE 8
IS+YLR+
Sbjct: 1787 ISKYLRQ 1793
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 ISRYLREQA 10
I +YL +QA
Sbjct: 574 IEKYLADQA 582
38|Sequence|186|195|LREQATGAKD
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 QATGAKD 10
+ATGA+D
Sbjct: 119 KATGAQD 125
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 QATGAKD 10
+ATGA+D
Sbjct: 119 KATGAQD 125
>sp|BHLF1_EBVB9|UNCHARACTERIZED protein BHLF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LREQATGAKD 10
L++QA+GA+
Sbjct: 59 LQDQASGARP 68
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 5 ATGAKD 10
ATG+KD
Sbjct: 137 ATGSKD 142
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 REQATG 7
RE+ATG
Sbjct: 679 REEATG 684
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 REQATG 7
RE+ATG
Sbjct: 679 REEATG 684
39|Sequence|191|200|TGAKDTKPMG
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 4 KDTKPMG 10
KDT+P G
Sbjct: 755 KDTEPQG 761
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 TGAKDTKPMG 10
T A+D P+G
Sbjct: 576 TSAQDDGPLG 585
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 TGAKDTKPMG 10
T A+D P+G
Sbjct: 584 TSAQDDGPLG 593
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 TGAKDTKPMG 10
T A+D P+G
Sbjct: 576 TSAQDDGPLG 585
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 2 GAKDTKPMG 10
GA+D+ P G
Sbjct: 273 GAQDSAPPG 281
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 2 GAKDTKPMG 10
G+K+ P+G
Sbjct: 92 GSKENSPLG 100
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 2 GAKDTKPMG 10
GA+D+ P G
Sbjct: 273 GAQDSAPPG 281
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TGAKDTKPM 9
+G K T PM
Sbjct: 475 SGGKSTHPM 483
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 4 KDTKPM 9
KDTKP+
Sbjct: 560 KDTKPV 565
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 TGAKDTKPM 9
+G K T PM
Sbjct: 475 SGGKSTHPM 483
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TGAKDTKPM 9
+G K T PM
Sbjct: 475 SGGKSTHPM 483
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 GAKDTKPMG 10
G+ D KP G
Sbjct: 2837 GSYDVKPTG 2845
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 4 KDTKPM 9
KDT PM
Sbjct: 204 KDTTPM 209
40|Sequence|196|205|TKPMGRSGAT
>sp|K42_HHV8P|PROTEIN K4.2|Human herpesvirus 8 type P
Query: 2 KPMGRSG 8
KP+GR+G
Sbjct: 11 KPVGRAG 17
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 1 TKPMGRSG 8
TKP+ R+G
Sbjct: 208 TKPVTRNG 215
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TKPMGRSG 8
TKP+ R+G
Sbjct: 208 TKPVTRNG 215
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 1 TKPMGRSG 8
TKP+ R+G
Sbjct: 208 TKPVTRNG 215
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 1 TKPMGRSGA 9
T+P GRS +
Sbjct: 289 TRPGGRSSS 297
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PMGRSGA 9
P+GR GA
Sbjct: 160 PLGRGGA 166
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PMGRSGA 9
P+GR GA
Sbjct: 160 PLGRGGA 166
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PMGRSGA 9
P+GR GA
Sbjct: 160 PLGRGGA 166
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 3 PMGRSGA 9
P+G SGA
Sbjct: 1264 PLGGSGA 1270
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 PMGRSGA 9
P+G SGA
Sbjct: 1264 PLGGSGA 1270
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 PMGRSGA 9
PMG SGA
Sbjct: 817 PMGGSGA 823
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 4 MGRSGAT 10
+GR+GAT
Sbjct: 469 LGRAGAT 475
41|Sequence|201|210|RSGATSRKAL
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 3 GATSRKAL 10
GA++R+AL
Sbjct: 567 GASTRRAL 574
42|Sequence|206|215|SRKALETLRR
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 SRKALETL 8
+RKA+E+L
Sbjct: 2674 ARKAIESL 2681
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 1 SRKALETL 8
++KA+ETL
Sbjct: 314 NKKAIETL 321
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 RKALETLRR 10
R ALE LR+
Sbjct: 940 RNALEFLRK 948
43|Sequence|211|220|ETLRRVGDGV
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 ETLRRVGD 8
+TL RVGD
Sbjct: 293 QTLDRVGD 300
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 ETLRRVGD 8
+TL RVGD
Sbjct: 293 QTLDRVGD 300
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 1 ETLRRVGD 8
+TL RVGD
Sbjct: 293 QTLDRVGD 300
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 2 TLRRVGDG 9
TLRR GD
Sbjct: 748 TLRREGDA 755
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LRRVGD 8
+RRVGD
Sbjct: 2093 IRRVGD 2098
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 LRRVGD 8
+RRVGD
Sbjct: 2093 IRRVGD 2098
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LRRVGD 8
+RRVGD
Sbjct: 2093 VRRVGD 2098
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 LRRVGD 8
+RRVGD
Sbjct: 2101 VRRVGD 2106
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 LRRVGD 8
+RRVGD
Sbjct: 2094 VRRVGD 2099
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 LRRVGD 8
+RRVGD
Sbjct: 2099 VRRVGD 2104
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 LRRVGD 8
+RRVGD
Sbjct: 2099 VRRVGD 2104
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 LRRVGD 8
+RRVGD
Sbjct: 2094 VRRVGD 2099
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 LRRVGD 8
+RRVGD
Sbjct: 2093 VRRVGD 2098
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 1 ETLRRVGDGV 10
+ + R+GDG+
Sbjct: 253 QLVTRIGDGL 262
>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12
Query: 1 ETLRRVGDGV 10
+ + R+GDG+
Sbjct: 284 QLVTRIGDGL 293
>sp|NEP_I56A3|NUCLEAR export protein|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 1 ETLRRVGD 8
ET+ R+GD
Sbjct: 47 ETVMRMGD 54
>sp|NEP_I03A1|NUCLEAR export protein|Influenza A virus (strain
Query: 1 ETLRRVGD 8
ET+ R+GD
Sbjct: 47 ETVMRMGD 54
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 5 RVGDGV 10
+VGDGV
Sbjct: 1362 QVGDGV 1367
>sp|NEP_I57A5|NUCLEAR export protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 ETLRRVGD 8
ET+ R+GD
Sbjct: 47 ETVMRMGD 54
>sp|YEC4_EBVB9|UNCHARACTERIZED protein EC-RF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ETLRRVG 7
+TLRR G
Sbjct: 260 QTLRRAG 266
44|Sequence|216|225|VGDGVQRNHE
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 1 VGDGVQRNHE 10
VGD +++N+E
Sbjct: 139 VGDALKKNNE 148
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 DGVQRNH 9
DG+ R+H
Sbjct: 71 DGIMRDH 77
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 DGVQRNH 9
DG+ R+H
Sbjct: 71 DGIMRDH 77
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 DGVQRNH 9
DG+ R+H
Sbjct: 71 DGIMRDH 77
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 DGVQRN 8
+G+QRN
Sbjct: 4 EGIQRN 9
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 GDGVQRN 8
G GV RN
Sbjct: 958 GSGVDRN 964
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 GDGVQRN 8
G GV RN
Sbjct: 959 GSGVDRN 965
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GDGVQRN 8
G GV RN
Sbjct: 959 GSGVDRN 965
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 2 GDGVQR 7
GDG++R
Sbjct: 449 GDGIER 454
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 2 GDGVQR 7
GDG++R
Sbjct: 458 GDGIER 463
45|Sequence|221|230|QRNHETAFQG
>sp|VP30_MABVP|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 RNHETA 7
RNH+TA
Sbjct: 11 RNHQTA 16
46|Sequence|226|235|TAFQGMLRKL
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 1 TAFQGMLRKL 10
TA QG+LR++
Sbjct: 27 TAGQGLLRRV 36
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 FQGMLRKL 10
FQGM +KL
Sbjct: 457 FQGMPKKL 464
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 FQGMLRKL 10
FQGM +KL
Sbjct: 457 FQGMPKKL 464
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 1 TAFQGMLRKL 10
TA QG+LR++
Sbjct: 27 TAGQGLLRRV 36
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 TAFQGMLRK 9
TA++GM K
Sbjct: 638 TAYEGMFAK 646
>sp|VP22_HHV11|TEGUMENT protein VP22|Human herpesvirus 1 (strain 17)
Query: 1 TAFQGMLRKL 10
T QG+ RKL
Sbjct: 167 TPAQGLARKL 176
47|Sequence|231|240|MLRKLDIKNE
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 MLRKLD 6
MLRKLD
Sbjct: 4036 MLRKLD 4041
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 MLRKLD 6
MLRKLD
Sbjct: 4013 MLRKLD 4018
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 MLRKLD 6
MLRKLD
Sbjct: 4036 MLRKLD 4041
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 MLRKLD 6
MLRKLD
Sbjct: 4013 MLRKLD 4018
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 MLRKLDIKN 9
MLR+LD+ +
Sbjct: 3698 MLRRLDMSS 3706
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 MLRKLDIKN 9
MLR+LD+ +
Sbjct: 3723 MLRRLDMSS 3731
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 MLRKLDIKN 9
MLR+LD+ +
Sbjct: 3698 MLRRLDMSS 3706
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 MLRKLDIKN 9
MLR+LD+ +
Sbjct: 3723 MLRRLDMSS 3731
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 1 MLRKLDIKN 9
M+R+L ++N
Sbjct: 171 MMRELSVRN 179
48|Sequence|236|245|DIKNEDDVKS
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 DIKNED 6
D+KNED
Sbjct: 117 DVKNED 122
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 DIKNED 6
D+KNED
Sbjct: 117 DVKNED 122
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 1 DIKNED 6
D+KNED
Sbjct: 117 DVKNED 122
>sp|IR12_HCMVA|UNCHARACTERIZED protein IRL12|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DIKNEDDVK 9
DI+NED K
Sbjct: 337 DIENEDREK 345
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 DIKNEDDV 8
DI+ E+D+
Sbjct: 2654 DIRTEEDI 2661
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 DIKNEDDV 8
DI+ E+D+
Sbjct: 2660 DIRTEEDI 2667
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 DIKNEDDVKS 10
D KN DD S
Sbjct: 64 DFKNTDDFLS 73
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 DIKNEDDV 8
DI+ E+D+
Sbjct: 2659 DIRTENDI 2666
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 DIKNEDDV 8
DI+ E+D+
Sbjct: 2660 DIRTENDI 2667
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 DIKNEDDVKS 10
DIK DD+ S
Sbjct: 238 DIKKTDDIGS 247
>sp|IL18B_MONPV|INTERLEUKIN-18-BINDING protein|Monkeypox virus (MPXV)
Query: 1 DIKNEDDVK 9
D+K+++D K
Sbjct: 58 DMKSDEDTK 66
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 DIKNEDDV 8
DI+NED +
Sbjct: 347 DIENEDKI 354
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 DIKNEDDV 8
DI+NED +
Sbjct: 347 DIENEDKI 354
>sp|PG073_VARV|CORE protein OPG073|Variola virus
Query: 2 IKNEDDV 8
IKN DDV
Sbjct: 19 IKNTDDV 25
>sp|PG073_VAR67|CORE protein OPG073|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 IKNEDDV 8
IKN DDV
Sbjct: 19 IKNTDDV 25
>sp|PG073_VACCC|CORE protein OPG073|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 IKNEDDV 8
IKN DDV
Sbjct: 19 IKNTDDV 25
>sp|PG073_MONPV|CORE protein OPG073|Monkeypox virus (MPXV)
Query: 2 IKNEDDV 8
IKN DDV
Sbjct: 19 IKNTDDV 25
49|Sequence|241|250|DDVKSLSRVM
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin)
Query: 1 DDVKSLSR 8
D VKSLSR
Sbjct: 35 DKVKSLSR 42
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DDVKSLSR 8
D VKSLSR
Sbjct: 35 DKVKSLSR 42
>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 3 VKSLSRVM 10
+KSL+R+M
Sbjct: 23 LKSLTRIM 30
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 DDVKSLSRV 9
D+VK+ SRV
Sbjct: 2352 DEVKTWSRV 2360
>sp|VP7_ROTYO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 3 VKSLSRVM 10
+KSL+R+M
Sbjct: 23 LKSLTRIM 30
>sp|VP7_ROTH3|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 3 VKSLSRVM 10
+KSL+R+M
Sbjct: 23 LKSLTRIM 30
>sp|VP7_ROTH4|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 3 VKSLSRVM 10
VKS++R+M
Sbjct: 23 VKSVTRIM 30
>sp|VP7_ROTHP|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 3 VKSLSRVM 10
+KSL+R+M
Sbjct: 23 LKSLTRIM 30
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DDVKSLS 7
DD++SLS
Sbjct: 747 DDLRSLS 753
>sp|VP7_ROTAM|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 3 VKSLSRVM 10
+KSL+R+M
Sbjct: 23 LKSLTRIM 30
50|Sequence|246|255|LSRVMIHVFS
>sp|PHOSP_PI1HD|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 LSRVMIHVFS 10
LSR HVF+
Sbjct: 346 LSRSASHVFA 355
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 LSRVMIHVFS 10
LSR HVF+
Sbjct: 346 LSRSASHVFA 355
>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 LSRVMIHVFS 10
LSR HVF+
Sbjct: 346 LSRSASHVFA 355
51|Sequence|251|260|IHVFSDGVTN
>sp|VE4_HPV1|PROTEIN E4|Human papillomavirus type 1 (Human
Query: 2 HVFSDGVTN 10
H+++DG+T+
Sbjct: 56 HLYADGLTD 64
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 1 IHVFSDG 7
+H+F DG
Sbjct: 285 VHIFCDG 291
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 IHVFSDG 7
+H+F DG
Sbjct: 285 VHIFCDG 291
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 1 IHVFSDG 7
+H+F DG
Sbjct: 284 VHIFCDG 290
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 1 IHVFSDG 7
+H+F DG
Sbjct: 284 VHIFCDG 290
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 HVFSDGVT 9
H+F DGV+
Sbjct: 2004 HLFLDGVS 2011
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 VFSDGVTN 10
+FSDG T+
Sbjct: 1016 LFSDGATS 1023
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 2 HVFSDG 7
HV++DG
Sbjct: 401 HVYADG 406
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 3 VFSDGVT 9
+F DGVT
Sbjct: 606 LFGDGVT 612
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 3 VFSDGVT 9
+F DG+T
Sbjct: 1032 LFGDGIT 1038
52|Sequence|256|265|DGVTNWGRIV
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 1 DGVTNWGRI 9
+ V +WGR+
Sbjct: 250 EAVIDWGRL 258
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 1 DGVTNWGRIV 10
+ +++WG+++
Sbjct: 254 NSLSDWGKVI 263
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 1 DGVTNWGRIV 10
+ +++WG+++
Sbjct: 254 NSLSDWGKVI 263
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 1 DGVTNWGRIV 10
+ +++WG+++
Sbjct: 254 NSLSDWGKVI 263
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 1 DGVTNWGRIV 10
+ +++WG+++
Sbjct: 254 NSLSDWGKVI 263
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 1 DGVTNWGRIV 10
+ +++WG+++
Sbjct: 254 NSLSDWGKVI 263
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DGVTNWGRI 9
+G+ WG+I
Sbjct: 965 EGIVIWGKI 973
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 DGVTNW 6
DG+T W
Sbjct: 1035 DGITRW 1040
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 6 WGRIV 10
WGR+V
Sbjct: 225 WGRLV 229
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 6 WGRIV 10
WGR+V
Sbjct: 225 WGRLV 229
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 DGVTNW 6
DG NW
Sbjct: 669 DGYVNW 674
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 DGVTNW 6
DG NW
Sbjct: 669 DGYVNW 674
>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 1 DGVTNW 6
DG T W
Sbjct: 242 DGATTW 247
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 DGVTNW 6
DG T W
Sbjct: 242 DGATTW 247
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 DGVTNW 6
DG T W
Sbjct: 242 DGATTW 247
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 DGVTNW 6
DG T W
Sbjct: 242 DGATTW 247
>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 DGVTNW 6
DG T W
Sbjct: 242 DGATTW 247
>sp|PG138_MONPV|25 kDa core protein OPG138|Monkeypox virus (MPXV)
Query: 2 GVTNWGRIV 10
VTN G+IV
Sbjct: 113 AVTNAGKIV 121
>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 DGVTNW 6
DG T W
Sbjct: 242 DGATTW 247
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 DGVTNW 6
DG T W
Sbjct: 242 DGATTW 247
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 DGVTNW 6
DG T W
Sbjct: 242 DGATTW 247
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 3 VTNWGRI 9
V +WGR+
Sbjct: 257 VDSWGRV 263
>sp|PG138_VACCC|25 kDa core protein OPG138|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GVTNWGRIV 10
VTN G+IV
Sbjct: 115 AVTNAGKIV 123
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 TNWGRIV 10
T+WG+I+
Sbjct: 332 TDWGKIL 338
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 3 VTNWGRI 9
V +WGR+
Sbjct: 253 VDSWGRV 259
>sp|VP6_ROTHS|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 DGVTNW 6
DG T W
Sbjct: 242 DGATTW 247
>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 DGVTNW 6
DG T W
Sbjct: 242 DGATTW 247
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 1 DGVTNW 6
DG T W
Sbjct: 242 DGATTW 247
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DGVTNWGRI 9
+G+ WG++
Sbjct: 964 EGIVIWGKV 972
>sp|PG138_VARV|25 kDa core protein OPG138|Variola virus
Query: 2 GVTNWGRIV 10
VTN G+IV
Sbjct: 112 AVTNAGKIV 120
>sp|PG138_VAR67|25 kDa core protein OPG138|Variola virus (isolate
Query: 2 GVTNWGRIV 10
VTN G+IV
Sbjct: 112 AVTNAGKIV 120
>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 DGVTNW 6
DG T W
Sbjct: 242 DGATTW 247
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 DGVTNW 6
DG T W
Sbjct: 242 DGATTW 247
>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 DGVTNW 6
DG T W
Sbjct: 242 DGATTW 247
>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 DGVTNW 6
DG T W
Sbjct: 242 DGATTW 247
>sp|PG138_VACCA|25 kDa core protein OPG138|Vaccinia virus (strain Ankara) (VACV)
Query: 2 GVTNWGRIV 10
VTN G+IV
Sbjct: 110 AVTNAGKIV 118
>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 DGVTNW 6
DG T W
Sbjct: 242 DGATTW 247
>sp|UL145_HCMVM|PROTEIN UL145|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DGVTNWGRI 9
DG W R+
Sbjct: 36 DGTAGWERL 44
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 DGVTNWG 7
DG WG
Sbjct: 136 DGYVGWG 142
53|Sequence|261|270|WGRIVTLISF
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 GRIVTLIS 9
GRIVTLIS
Sbjct: 3780 GRIVTLIS 3787
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 GRIVTLIS 9
GRIVTLIS
Sbjct: 3750 GRIVTLIS 3757
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 GRIVTLIS 9
GRIVTLIS
Sbjct: 3730 GRIVTLIS 3737
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 GRIVTLIS 9
GRIVTLIS
Sbjct: 3780 GRIVTLIS 3787
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 GRIVTLIS 9
GRIVTLIS
Sbjct: 3750 GRIVTLIS 3757
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 GRIVTLIS 9
GRIVTLIS
Sbjct: 3730 GRIVTLIS 3737
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 WGRIVTLI 8
WG ++T+I
Sbjct: 4 WGLLLTMI 11
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 2 GRIVTLI 8
G+IVTLI
Sbjct: 2 GQIVTLI 8
>sp|CAPSD_HBVD2|CAPSID protein|Hepatitis B virus genotype D
Query: 1 WGRIVTL 7
WG ++TL
Sbjct: 62 WGDLITL 68
>sp|CAPSD_HBVD4|CAPSID protein|Hepatitis B virus genotype D
Query: 1 WGRIVTL 7
WG ++TL
Sbjct: 62 WGDLITL 68
54|Sequence|266|275|TLISFGAFVA
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 LISFGAFVA 10
L SFGAFV+
Sbjct: 1465 LYSFGAFVS 1473
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 LISFGAFVA 10
L SFGAFV+
Sbjct: 1465 LYSFGAFVS 1473
>sp|ARBH_HHV8P|APOPTOSIS regulator Bcl-2 homolog|Human herpesvirus 8 type P
Query: 2 LISFGAFVA 10
+++FG+FVA
Sbjct: 90 ILTFGSFVA 98
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 2 LISFGA 7
L+SFGA
Sbjct: 1182 LVSFGA 1187
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 ISFGAFVA 10
+SFGA+++
Sbjct: 1267 LSFGAYMS 1274
>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 295 LVSFGVWI 302
>sp|HBEAG_HBVC7|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
>sp|HBEAG_HBVB1|EXTERNAL core antigen|Hepatitis B virus genotype B1
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
>sp|HBEAG_HBVA8|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
>sp|HBEAG_HBVA7|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
>sp|CAPSD_HBVH3|CAPSID protein|Hepatitis B virus genotype H
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVF1|CAPSID protein|Hepatitis B virus genotype F2
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVCJ|CAPSID protein|Hepatitis B virus genotype C
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVC7|CAPSID protein|Hepatitis B virus genotype C
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVC5|CAPSID protein|Hepatitis B virus genotype C
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVC4|CAPSID protein|Hepatitis B virus genotype C
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVC3|CAPSID protein|Hepatitis B virus genotype C
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVC0|CAPSID protein|Hepatitis B virus genotype C
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVB8|CAPSID protein|Hepatitis B virus genotype B1
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVB4|CAPSID protein|Hepatitis B virus genotype B/C
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVB3|CAPSID protein|Hepatitis B virus genotype B2
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVB2|CAPSID protein|Hepatitis B virus genotype B2
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVB1|CAPSID protein|Hepatitis B virus genotype B1
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVA8|CAPSID protein|Hepatitis B virus genotype A3
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVA7|CAPSID protein|Hepatitis B virus genotype A2
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVA6|CAPSID protein|Hepatitis B virus genotype A1
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVA5|CAPSID protein|Hepatitis B virus genotype A1
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVA4|CAPSID protein|Hepatitis B virus genotype A2
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVA3|CAPSID protein|Hepatitis B virus genotype A2
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVA2|CAPSID protein|Hepatitis B virus genotype A2
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|HBEAG_HBVD5|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
>sp|HBEAG_HBVCJ|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
>sp|HBEAG_HBVC0|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
>sp|HBEAG_HBVB4|EXTERNAL core antigen|Hepatitis B virus genotype B/C
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
>sp|CAPSD_HBVD2|CAPSID protein|Hepatitis B virus genotype D
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVB7|CAPSID protein|Hepatitis B virus genotype B1
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|HBEAG_HBVC3|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
>sp|HBEAG_HBVB2|EXTERNAL core antigen|Hepatitis B virus genotype B2
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
>sp|CAPSD_HBVG1|CAPSID protein|Hepatitis B virus genotype G
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 131 LVSFGVWI 138
>sp|CAPSD_HBVC9|CAPSID protein|Hepatitis B virus genotype C
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVC8|CAPSID protein|Hepatitis B virus genotype C
Query: 2 LISFGAFVA 10
L+SFG ++
Sbjct: 119 LVSFGVWIG 127
>sp|CAPSD_HBVB6|CAPSID protein|Hepatitis B virus genotype B2
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|HBEAG_HBVA5|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 131 LVSFGVWI 138
>sp|Y206_ADE07|UNCHARACTERIZED 20.6 kDa early protein|Human adenovirus B serotype 7
Query: 1 TLISFGAFVA 10
T ++FG+F+A
Sbjct: 77 TELTFGSFMA 86
>sp|HBEAG_HBVC2|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
>sp|CAPSD_HBVG2|CAPSID protein|Hepatitis B virus genotype G
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 131 LVSFGVWI 138
>sp|CAPSD_HBVD5|CAPSID protein|Hepatitis B virus genotype D
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|CAPSD_HBVC2|CAPSID protein|Hepatitis B virus genotype C
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 119 LVSFGVWI 126
>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
>sp|HBEAG_HBVF1|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 2 LISFGAFV 9
L+SFG ++
Sbjct: 148 LVSFGVWI 155
55|Sequence|271|280|GAFVAKHLKT
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 4 VAKHLKT 10
V KHLKT
Sbjct: 958 VLKHLKT 964
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 4 VAKHLKT 10
V KHLKT
Sbjct: 958 VLKHLKT 964
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 4 VAKHLKT 10
V KHLKT
Sbjct: 958 VLKHLKT 964
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 AFVAKHL 8
AF+++HL
Sbjct: 1606 AFISRHL 1612
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 1 GAFVAKH 7
GA++ KH
Sbjct: 231 GAYIVKH 237
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 1 GAFVAKH 7
GA++ KH
Sbjct: 231 GAYIVKH 237
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 1 GAFVAKH 7
GA++ KH
Sbjct: 231 GAYIVKH 237
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 1 GAFVAKH 7
GA++ KH
Sbjct: 231 GAYIVKH 237
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 1 GAFVAKH 7
GA++ KH
Sbjct: 231 GAYIVKH 237
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 1 GAFVAKH 7
GA++ KH
Sbjct: 231 GAYIVKH 237
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 1 GAFVAKH 7
GA++ KH
Sbjct: 231 GAYIVKH 237
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 GAFVAKHLKT 10
G F +HL T
Sbjct: 633 GMFAVQHLHT 642
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 GAFVAKHLKT 10
G FV K+L++
Sbjct: 551 GLFVEKYLRS 560
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 3 FVAKHLK 9
FV++H+K
Sbjct: 824 FVSRHVK 830
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 3 FVAKHLK 9
FV++H+K
Sbjct: 824 FVSRHVK 830
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 3 FVAKHLK 9
FV++H+K
Sbjct: 823 FVSRHVK 829
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GAFVAKHL 8
GA+V HL
Sbjct: 496 GAYVEMHL 503
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GAFVAKHL 8
GA+V HL
Sbjct: 495 GAYVEMHL 502
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GAFVAKHL 8
GA+V HL
Sbjct: 495 GAYVEMHL 502
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GAFVAKHL 8
GA+V HL
Sbjct: 496 GAYVEMHL 503
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GAFVAKHL 8
GA+V HL
Sbjct: 496 GAYVEMHL 503
>sp|POL_HV1Z6|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 29 AEHLKT 34
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1317 AEHLKT 1322
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1326 AEHLKT 1331
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1326 AEHLKT 1331
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1316 AEHLKT 1321
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1311 AEHLKT 1316
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1309 AEHLKT 1314
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1314 AEHLKT 1319
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1313 AEHLKT 1318
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1313 AEHLKT 1318
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1317 AEHLKT 1322
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1315 AEHLKT 1320
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1313 AEHLKT 1318
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1316 AEHLKT 1321
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1317 AEHLKT 1322
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1311 AEHLKT 1316
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1321 AEHLKT 1326
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1315 AEHLKT 1320
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1316 AEHLKT 1321
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1320 AEHLKT 1325
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1316 AEHLKT 1321
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1320 AEHLKT 1325
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1316 AEHLKT 1321
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1328 AEHLKT 1333
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1316 AEHLKT 1321
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1328 AEHLKT 1333
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1328 AEHLKT 1333
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1318 AEHLKT 1323
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1316 AEHLKT 1321
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1311 AEHLKT 1316
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1311 AEHLKT 1316
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1311 AEHLKT 1316
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1312 AEHLKT 1317
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 AKHLKT 10
A+HLKT
Sbjct: 1316 AEHLKT 1321
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 1 GAFVAKH 7
GA++ KH
Sbjct: 231 GAYLVKH 237
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GAFVAKHL 8
GA+V HL
Sbjct: 496 GAYVEMHL 503
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 GAFVAKHLK 9
G FV K+L+
Sbjct: 567 GLFVEKYLR 575
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 FVAKHLKT 10
F KH+KT
Sbjct: 807 FKPKHVKT 814
56|Sequence|276|285|KHLKTINQES
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 4 KTINQES 10
+TIN+ES
Sbjct: 364 RTINKES 370
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 2 HLKTINQES 10
HL T+N ++
Sbjct: 132 HLATVNADT 140
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 1 KHLKTINQES 10
KH +T+ QE+
Sbjct: 31 KHWQTLRQEA 40
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 3 LKTINQES 10
+KT+N ES
Sbjct: 326 IKTLNDES 333
57|Sequence|281|290|INQESCIEPL
>sp|UL59_HCMVA|UNCHARACTERIZED protein UL59|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 INQESCI 7
++QESC+
Sbjct: 4 VDQESCL 10
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 INQESCIEPL 10
IN++ C EPL
Sbjct: 692 INEQLCGEPL 701
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 5 SCIEPL 10
SC++PL
Sbjct: 412 SCVDPL 417
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 5 SCIEPL 10
SCI+P+
Sbjct: 417 SCIDPM 422
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 SCIEPL 10
SCI PL
Sbjct: 574 SCIHPL 579
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 SCIEPL 10
SCI PL
Sbjct: 574 SCIHPL 579
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 SCIEPL 10
SCI PL
Sbjct: 574 SCIHPL 579
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 INQESCI 7
+NQ SC+
Sbjct: 412 VNQRSCL 418
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 INQESCI 7
+NQ SC+
Sbjct: 411 VNQRSCL 417
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 INQESCI 7
+NQ SC+
Sbjct: 411 VNQRSCL 417
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 5 SCIEPL 10
+CI+PL
Sbjct: 417 TCIDPL 422
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 6 CIEPL 10
C+EPL
Sbjct: 1817 CLEPL 1821
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 1 INQESC 6
+NQ+SC
Sbjct: 207 VNQQSC 212
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 1 INQESC 6
+NQ+SC
Sbjct: 207 VNQQSC 212
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 2 NQESCIE 8
N E C+E
Sbjct: 98 NSEPCVE 104
58|Sequence|286|295|CIEPLAESIT
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 CIEPLAESI 9
CI PLAE +
Sbjct: 573 CIHPLAEQV 581
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CIEPLAESI 9
CI PLAE +
Sbjct: 575 CIHPLAEQV 583
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CIEPLAESI 9
CI PLAE +
Sbjct: 575 CIHPLAEQV 583
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CIEPLAESI 9
CI PLAE +
Sbjct: 575 CIHPLAEQV 583
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CIEPLAESI 9
CI PLAE +
Sbjct: 573 CIHPLAEQV 581
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CIEPLAESI 9
CI PLAE +
Sbjct: 573 CIHPLAEQV 581
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CIEPLAESI 9
CI PLAE +
Sbjct: 573 CIHPLAEQV 581
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CIEPLAESI 9
CI PLAE +
Sbjct: 575 CIHPLAEQV 583
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 IEPLAESIT 10
I PLAE +T
Sbjct: 575 IHPLAEQVT 583
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 IEPLAESIT 10
I PLAE +T
Sbjct: 575 IHPLAEQVT 583
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 IEPLAESIT 10
I PLAE +T
Sbjct: 574 IHPLAEQVT 582
>sp|Z_MACHU|RING finger protein Z|Machupo virus (MACV)
Query: 1 CIEPLAESIT 10
C +PL SIT
Sbjct: 75 CWKPLPTSIT 84
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 IEPLAESI 9
+ PLAES+
Sbjct: 577 LHPLAESV 584
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 1 CIEPLAE 7
CI+PL +
Sbjct: 418 CIDPLGK 424
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 CIEPLAES 8
C+E LAE+
Sbjct: 1152 CLEILAET 1159
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 CIEPLAES 8
C+E LAE+
Sbjct: 1152 CLEILAET 1159
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 CIEPLAES 8
C+E LAE+
Sbjct: 1152 CLEILAET 1159
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 CIEPLAESI 9
CI LAE +
Sbjct: 573 CIHDLAEQV 581
59|Sequence|291|300|AESITDVLVR
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AESITDVL 8
AESIT+ L
Sbjct: 117 AESITEFL 124
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AESITDVL 8
AESIT+ L
Sbjct: 117 AESITEFL 124
60|Sequence|296|305|DVLVRTKRDW
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 5 RTKRDW 10
+TK+DW
Sbjct: 749 KTKQDW 754
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 VLVRTKRDW 10
VL +TK+ W
Sbjct: 890 VLFQTKQKW 898
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 VLVRTKRDW 10
VL +TK+ W
Sbjct: 890 VLFQTKQKW 898
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 5 RTKRDW 10
RT+R W
Sbjct: 635 RTRRKW 640
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DVLVRTKRD 9
D LVR RD
Sbjct: 307 DKLVRLSRD 315
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 VLVRTKRDW 10
V+ R+ R W
Sbjct: 2440 VITRSPRSW 2448
61|Sequence|301|310|TKRDWLVKQR
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 3 RDWLVKQR 10
+DWL K+R
Sbjct: 633 KDWLAKRR 640
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 3 RDWLVKQR 10
+DWL K+R
Sbjct: 633 KDWLAKRR 640
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 TKRDWLVKQR 10
T+R WL+ +R
Sbjct: 636 TRRKWLLMKR 645
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 KRDWLVKQ 9
KRDW++ Q
Sbjct: 1005 KRDWVLFQ 1012
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 KRDWLVKQ 9
KRDW++ Q
Sbjct: 1005 KRDWVLFQ 1012
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 2 KRDWLVKQR 10
K DWL K R
Sbjct: 560 KNDWLSKAR 568
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 KRDWLVKQR 10
K DWL K R
Sbjct: 560 KNDWLSKAR 568
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 2 KRDWLVKQR 10
K DWL K R
Sbjct: 560 KNDWLSKAR 568
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 TKRDW 5
TK+DW
Sbjct: 4527 TKKDW 4531
>sp|ORF24_TTVV4|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 TKRDWLVKQR 10
TK+DW +Q+
Sbjct: 229 TKQDWETEQQ 238
>sp|PG065_VACCC|RNA-BINDING protein OPG065|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TKRDW 5
TKRDW
Sbjct: 129 TKRDW 133
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 TKRDW 5
TK+DW
Sbjct: 750 TKQDW 754
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 KRDWLVK 8
KR+W+ K
Sbjct: 2156 KREWVFK 2162
>sp|PG065_VAR67|RNA-BINDING protein OPG065|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 TKRDW 5
TKRDW
Sbjct: 129 TKRDW 133
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 KRDWLVK 8
KR+W+ K
Sbjct: 2156 KREWVFK 2162
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 KRDWLVK 8
KR+W+ K
Sbjct: 2156 KREWVFK 2162
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 1 TKRDWLVKQR 10
+K W VKQ+
Sbjct: 146 SKFHWAVKQQ 155
>sp|VPU_HV192|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 4 DWLVKQ 9
DWLVK+
Sbjct: 45 DWLVKR 50
62|Sequence|306|315|LVKQRGWDGF
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 LVKQRGWDGF 10
L +QR WD F
Sbjct: 1725 LSEQRTWDYF 1734
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWD 8
L+ +RGWD
Sbjct: 781 LLGRRGWD 788
>sp|NP04_HHV11|NUCLEAR protein UL4|Human herpesvirus 1 (strain 17)
Query: 4 QRGWDG 9
+RGWD
Sbjct: 90 ERGWDA 95
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LVKQRGW 7
+VKQR W
Sbjct: 161 IVKQRRW 167
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LVKQRGW 7
+VKQR W
Sbjct: 161 IVKQRRW 167
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 KQRGW 7
K+RGW
Sbjct: 1486 KERGW 1490
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 6 GWDGF 10
GWDG
Sbjct: 224 GWDGL 228
>sp|VE6_HPV24|PROTEIN E6|Human papillomavirus 24
Query: 4 QRGWDGF 10
+RGW G
Sbjct: 127 RRGWKGL 133
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 VKQRGWDG 9
V Q GW G
Sbjct: 371 VLQEGWKG 378
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 VKQRGWDG 9
V Q GW G
Sbjct: 371 VLQEGWKG 378
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 VKQRGWDG 9
V Q GW G
Sbjct: 371 VLQEGWKG 378
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 VKQRGWDG 9
V Q GW G
Sbjct: 371 VLQEGWKG 378
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 VKQRGWDG 9
V Q GW G
Sbjct: 371 VLQEGWKG 378
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 VKQRGWDG 9
V Q GW G
Sbjct: 371 VLQEGWKG 378
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 VKQRGWDG 9
V Q GW G
Sbjct: 371 VLQEGWKG 378
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 VKQRGWDG 9
V Q GW G
Sbjct: 371 VLQEGWKG 378
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 VKQRGWDG 9
V Q GW G
Sbjct: 371 VLQEGWKG 378
>sp|K81_HHV8P|PROTEIN K8.1|Human herpesvirus 8 type P
Query: 4 QRGWDG 9
Q GW G
Sbjct: 39 QEGWSG 44
>sp|NEF_HV2G1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 LVKQRGWDG 9
+K+RG DG
Sbjct: 122 FIKKRGLDG 130
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QRGWD 8
QRGW+
Sbjct: 782 QRGWE 786
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 VKQRGW 7
VK +GW
Sbjct: 1022 VKDKGW 1027
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 783 LLGRRGWEAL 792
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 781 LLGRRGWEAL 790
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 774 LLGRRGWEAL 783
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 787 LLGRRGWEAL 796
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 781 LLGRRGWEAL 790
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 793 LLGRRGWEAL 802
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 775 LLGRRGWEAL 784
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDG 9
L+ +RGW+
Sbjct: 791 LLGRRGWEA 799
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 784 LLGRRGWEAL 793
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 3 KQRGW 7
K+RGW
Sbjct: 1299 KKRGW 1303
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 KQRGW 7
K+RGW
Sbjct: 1370 KKRGW 1374
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDG 9
L+ +RGW+
Sbjct: 787 LLGRRGWEA 795
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 784 LLGRRGWEAL 793
>sp|GD_CHV1|ENVELOPE glycoprotein D|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 1 LVKQRGW 7
LVK GW
Sbjct: 192 LVKVNGW 198
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 784 LLGRRGWEAL 793
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 779 LLGRRGWEAL 788
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 1 LVKQRGWDGF 10
LV RG DG
Sbjct: 417 LVADRGEDGL 426
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 784 LLGRRGWEAL 793
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 784 LLGRRGWEAL 793
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 GWDGF 10
GWD F
Sbjct: 385 GWDAF 389
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 KQRGW 7
K+RGW
Sbjct: 1370 KKRGW 1374
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 KQRGW 7
K+RGW
Sbjct: 1371 KKRGW 1375
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 KQRGW 7
K+RGW
Sbjct: 1371 KKRGW 1375
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 782 LLGRRGWEAL 791
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 GWDGF 10
GWD F
Sbjct: 385 GWDAF 389
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 KQRGW 7
K+RGW
Sbjct: 1371 KKRGW 1375
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 795 LLGRRGWEAL 804
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 775 LLGRRGWEAL 784
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 784 LLGRRGWEAL 793
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 KQRGW 7
K+RGW
Sbjct: 1371 KKRGW 1375
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LVKQRGWDGF 10
L+ +RGW+
Sbjct: 789 LLGRRGWEAL 798
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 LVKQRGWD 8
LVK WD
Sbjct: 102 LVKYANWD 109
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 LVKQRGWD 8
LVK WD
Sbjct: 102 LVKYANWD 109
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 LVKQRGWD 8
LVK WD
Sbjct: 102 LVKYANWD 109
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 LVKQRGWD 8
LVK WD
Sbjct: 102 LVKYANWD 109
>sp|PG200_VARV|PROTEIN OPG200|Variola virus
Query: 1 LVKQRGWD 8
LVK WD
Sbjct: 71 LVKNMPWD 78
>sp|PG200_VAR67|PROTEIN OPG200|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LVKQRGWD 8
LVK WD
Sbjct: 71 LVKNMPWD 78
>sp|PG200_VACCC|PROTEIN OPG200|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LVKQRGWD 8
LVK WD
Sbjct: 71 LVKNMPWD 78
>sp|PG200_MONPV|PROTEIN OPG200|Monkeypox virus (MPXV)
Query: 1 LVKQRGWD 8
LVK WD
Sbjct: 71 LVKNMPWD 78
63|Sequence|311|320|GWDGFVEFFH
>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)
Query: 2 WDGFVEFFH 10
+DG +E FH
Sbjct: 70 YDGIIELFH 78
>sp|GI_HHV23|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain 333)
Query: 2 WDGFVEFFH 10
+DG +E FH
Sbjct: 70 YDGIIELFH 78
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 4 GFVEFFH 10
GF E+FH
Sbjct: 740 GFAEWFH 746
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 WDGFVEFFH 10
W+ F FFH
Sbjct: 552 WEMFKFFFH 560
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 WDGFVEFFH 10
W+ F FFH
Sbjct: 554 WEMFKFFFH 562
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 WDGFVEFFH 10
W+ F FFH
Sbjct: 547 WEMFKFFFH 555
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 WDGFVEFFH 10
+DG+ EF H
Sbjct: 768 YDGWSEFRH 776
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GWDGFVEFF 9
G GF+ FF
Sbjct: 43 GVQGFISFF 51
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 2 WDGFVE 7
WD FVE
Sbjct: 84 WDLFVE 89
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 2 WDGFVE 7
WD FVE
Sbjct: 84 WDLFVE 89
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 2 WDGFVE 7
WD FVE
Sbjct: 84 WDLFVE 89
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 WDGFVE 7
WD FVE
Sbjct: 84 WDLFVE 89
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 2 WDGFVE 7
WD FVE
Sbjct: 101 WDLFVE 106
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 WDGFVE 7
WD FVE
Sbjct: 84 WDLFVE 89
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 2 WDGFVE 7
WD FVE
Sbjct: 99 WDLFVE 104
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 WDGFVE 7
WD FVE
Sbjct: 84 WDLFVE 89
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 2 WDGFVE 7
WD FVE
Sbjct: 100 WDLFVE 105
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 2 WDGFVEFFH 10
+DGF+E H
Sbjct: 88 YDGFLENAH 96
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 WDGFVEFFH 10
+DGF+E H
Sbjct: 88 YDGFLENAH 96
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GFVEFF 9
GF+ FF
Sbjct: 724 GFISFF 729
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GFVEFF 9
GF+ FF
Sbjct: 724 GFISFF 729
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 GFVEFF 9
GF+ FF
Sbjct: 724 GFISFF 729
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 WDGFVEFF 9
WD FF
Sbjct: 426 WDAIKRFF 433
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 WDGFVEFF 9
WD FF
Sbjct: 426 WDAIKRFF 433
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 WDGFVEFF 9
WD FF
Sbjct: 426 WDAIKRFF 433
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 WDGFVEFF 9
WD FF
Sbjct: 426 WDAIKRFF 433
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 WDGFVEFF 9
WD FF
Sbjct: 426 WDAIKRFF 433
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 WDGFVEFF 9
WD FF
Sbjct: 426 WDAIKRFF 433
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 WDGFVEFF 9
WD FF
Sbjct: 426 WDAIKRFF 433
>sp|EAR_EBVG|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 FVEFFH 10
FVE FH
Sbjct: 87 FVEIFH 92
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 2 WDGFVE 7
WD F+E
Sbjct: 84 WDLFIE 89
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 4 GFVEFFH 10
GF+ FH
Sbjct: 429 GFLNIFH 435
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 4 GFVEFFH 10
GF+ FH
Sbjct: 429 GFLNIFH 435
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 4 GFVEFFH 10
GF+ FH
Sbjct: 429 GFLNIFH 435
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 4 GFVEFFH 10
GF+ FH
Sbjct: 429 GFLNIFH 435
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 GFVEFFH 10
GF+ FH
Sbjct: 429 GFLNIFH 435
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 4 GFVEFFH 10
GF+ FH
Sbjct: 429 GFLNIFH 435
64|Sequence|316|325|VEFFHVEDLE
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 2 EFFHVEDL 9
+FFH ED+
Sbjct: 1268 QFFHKEDI 1275
>sp|PG172_MONPV|PROTEIN OPG172|Monkeypox virus (MPXV)
Query: 4 FHVEDLE 10
FH ED+E
Sbjct: 27 FHSEDIE 33
>sp|PG172_VACCC|PROTEIN A43|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 FHVEDLE 10
FH ED+E
Sbjct: 28 FHSEDVE 34
>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49
Query: 4 FHVEDLE 10
F+V+DLE
Sbjct: 463 FYVQDLE 469
>sp|PG045_MONPV|APOPTOSIS regulator OPG045|Monkeypox virus (MPXV)
Query: 1 VEFFHVEDLE 10
+++ HV D+E
Sbjct: 11 IDYVHVHDIE 20
>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VEFFHVED 8
V F H ED
Sbjct: 189 VPFMHAED 196
>sp|MATRX_VSNJO|MATRIX protein|Vesicular stomatitis New Jersey virus
Query: 2 EFFHVEDLE 10
+FF +ED++
Sbjct: 44 DFFGMEDMD 52
>sp|DUT_ORFN2|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Orf virus (strain NZ2) (OV
Query: 1 VEFFHVEDLE 10
+EF H E L+
Sbjct: 1 MEFCHTETLQ 10
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 4 FHVEDLE 10
FH+++LE
Sbjct: 106 FHIKELE 112
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 FHVEDLE 10
FH+++LE
Sbjct: 106 FHIKELE 112
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 4 FHVEDLE 10
FH+++LE
Sbjct: 106 FHIKELE 112
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 4 FHVEDLE 10
FH+++LE
Sbjct: 106 FHIKELE 112
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 FHVEDLE 10
FH+++LE
Sbjct: 106 FHIKELE 112
>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)
Query: 4 FHVEDLE 10
FH+++LE
Sbjct: 106 FHIKELE 112
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 5 HVEDLE 10
H+ED+E
Sbjct: 2214 HIEDIE 2219
>sp|PG060_MONPV|PROTEIN OPG060|Monkeypox virus (MPXV)
Query: 1 VEFFHVEDL 9
+E F+VE+L
Sbjct: 12 MEIFNVEEL 20
65|Sequence|321|330|VEDLEGGIRN
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 EDLEGGIRN 10
ED G +RN
Sbjct: 2041 EDFTGHVRN 2049
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 2 EDLEGG 7
+DLEGG
Sbjct: 276 DDLEGG 281
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 2 EDLEGG 7
+DLEGG
Sbjct: 276 DDLEGG 281
>sp|VP22_VZVO|TEGUMENT protein VP22|Varicella-zoster virus (strain Oka vaccine)
Query: 3 DLEGGIRN 10
DL+GG+ N
Sbjct: 257 DLQGGMGN 264
>sp|VP22_VZVD|TEGUMENT protein VP22|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 DLEGGIRN 10
DL+GG+ N
Sbjct: 257 DLQGGMGN 264
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LEGGIRN 10
++GG+RN
Sbjct: 213 VKGGVRN 219
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LEGGIRN 10
++GG+RN
Sbjct: 213 VKGGVRN 219
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 3 DLEGGIRN 10
DLE IRN
Sbjct: 483 DLEVSIRN 490
>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)
Query: 4 LEGGIRN 10
LEG +RN
Sbjct: 16 LEGHVRN 22
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 4 LEGGIRN 10
LEG +RN
Sbjct: 16 LEGHVRN 22
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 LEGGIRN 10
LEG +RN
Sbjct: 16 LEGHVRN 22
>sp|NSP3_ROTHT|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 VEDLEGGIRN 10
++D+E IRN
Sbjct: 278 IDDIESLIRN 287
>sp|NSP3_ROTHW|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 VEDLEGGIRN 10
++D+E IRN
Sbjct: 278 IDDIESLIRN 287
>sp|NSP3_ROTHK|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 1 VEDLEGGIRN 10
++D+E IRN
Sbjct: 278 IDDIESLIRN 287
>sp|NSP3_ROTHP|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 VEDLEGGIRN 10
++D+E IRN
Sbjct: 275 IDDIESLIRN 284
>sp|NSP3_ROTAD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 VEDLEGGIRN 10
++D+E IRN
Sbjct: 275 IDDIESLIRN 284
>sp|NSP3_ROTAM|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 VEDLEGGIRN 10
++D+E IRN
Sbjct: 275 IDDIESLIRN 284
>sp|NSP3_ROTWI|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United
Query: 1 VEDLEGGIRN 10
++D+E IRN
Sbjct: 278 IDDIESLIRN 287
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 VEDLEGGIR 9
+ D EGG +
Sbjct: 2054 ISDFEGGFQ 2062
>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49
Query: 1 VEDLEG 6
V+DLEG
Sbjct: 465 VQDLEG 470
>sp|NSP3_ROT41|NON-STRUCTURAL protein 3|Rotavirus A (isolate
Query: 1 VEDLEGGIRN 10
++D E IRN
Sbjct: 278 IDDFESLIRN 287
>sp|NSP3_ROTH7|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United
Query: 1 VEDLEGGIRN 10
++D E IRN
Sbjct: 275 IDDFESLIRN 284
66|Sequence|326|335|GGIRNVLLAF
>sp|YVAD_VACCC|UNCHARACTERIZED 9.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 IRNVLLAF 10
+RN+LL F
Sbjct: 12 VRNILLNF 19
>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48
Query: 1 GGIRNVLLAF 10
GG VL+AF
Sbjct: 358 GGAAKVLVAF 367
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 GGIRNVL 7
GG++NV+
Sbjct: 1637 GGLKNVV 1643
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 GGIRNVL 7
GG++NV+
Sbjct: 1636 GGLKNVV 1642
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 GGIRNVL 7
GG++NV+
Sbjct: 1636 GGLKNVV 1642
67|Sequence|331|340|VLLAFAGVAG
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 VLLAFAGV 8
VLL FAGV
Sbjct: 374 VLLLFAGV 381
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 VLLAFAGV 8
VLL FAGV
Sbjct: 374 VLLLFAGV 381
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 VLLAFAGV 8
VLL FAGV
Sbjct: 374 VLLLFAGV 381
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 VLLAFAGV 8
VLL FAGV
Sbjct: 374 VLLLFAGV 381
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 VLLAFAGV 8
VLL FAGV
Sbjct: 374 VLLLFAGV 381
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VLLAFAGV 8
VLL FAGV
Sbjct: 374 VLLLFAGV 381
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 VLLAFAGV 8
VLL FAGV
Sbjct: 374 VLLLFAGV 381
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 VLLAFAGV 8
VLL FAGV
Sbjct: 374 VLLLFAGV 381
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 2 LLAFAGV 8
L+AFAG+
Sbjct: 311 LIAFAGI 317
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 1 VLLAFAGVA 9
VLL AGVA
Sbjct: 401 VLLYMAGVA 409
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 1 VLLAFAGV 8
VLL FAGV
Sbjct: 246 VLLLFAGV 253
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 1 VLLAFAGV 8
VLL FAGV
Sbjct: 258 VLLLFAGV 265
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 1 VLLAFAGV 8
VLL FAGV
Sbjct: 258 VLLLFAGV 265
68|Sequence|336|350|AGVAGVGAGLAYLIR
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 AGVAGVGAGLAY 12
AG+ GV AGLA+
Sbjct: 1365 AGLVGVLAGLAF 1376
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 AGVAGVGAGLAY 12
AG+ GV AGLA+
Sbjct: 1365 AGLVGVLAGLAF 1376
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 AGVAGVGAGLAY 12
AG+ GV AGLA+
Sbjct: 1365 AGLVGVLAGLAF 1376
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 AGVAGVGAGLAY 12
AG+ GV AGLA+
Sbjct: 1365 AGLVGVLAGLAF 1376
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 AGVAGVGAGLAY 12
AG+ GV AGLA+
Sbjct: 1365 AGLVGVLAGLAF 1376
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 AGVAGVGAGLAYLI 14
+ +AG GA ++Y+I
Sbjct: 617 SAIAGTGAPISYVI 630
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 AGVAGVGAGLAY 12
AG+ GV AGLA+
Sbjct: 1365 AGLVGVLAGLAF 1376
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 AGVAGVGAGLAY 12
AG+ GV AGLA+
Sbjct: 1365 AGLVGVLAGLAF 1376
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 AGVAGVGAGLAY 12
AG+ GV AGLA+
Sbjct: 1365 AGLVGVLAGLAF 1376
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 1 AGVAGVGAGL 10
+G+AGVG+G
Sbjct: 457 SGMAGVGSGF 466
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 AGVAGVGAGLAYLI 14
AGV G G AY I
Sbjct: 255 AGVEPTGTGCAYNI 268
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 1 AGVAGVGAGLAY 12
A +A +G GL Y
Sbjct: 343 AKIADIGEGLTY 354
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 5 GVGAGLAY 12
GVG+GL Y
Sbjct: 302 GVGSGLLY 309
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 7 GAGLAYLIR 15
G+GLA+ +R
Sbjct: 234 GSGLAFFMR 242
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVMELIR 195
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVLELIR 195
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVLELIR 195
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVLELIR 195
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 5 GVGAGLAYL 13
GV AGLAY
Sbjct: 355 GVMAGLAYF 363
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVLELIR 195
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVLELIR 195
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVLELIR 195
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVLELIR 195
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVLELIR 195
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTMVLELIR 195
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTVVMELIR 195
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + L+R
Sbjct: 181 AAVKGVGTMVMELVR 195
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 AGVAGVGAGLAYLIR 15
A + GVG + LIR
Sbjct: 181 AAIKGVGTMVMELIR 195
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + L+R
Sbjct: 181 AAVKGVGTMVMELVR 195
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + L+R
Sbjct: 181 AAVKGVGTMVMELVR 195
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 AGVAGVGAGLAYLIR 15
A + GVG + LIR
Sbjct: 181 AAIKGVGTMVMELIR 195
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 1 AGVAGVGAGLAYLIR 15
A + GVG + LIR
Sbjct: 181 AAIKGVGTMVMELIR 195
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTIVMELIR 195
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 1 AGVAGVGAGLAYL 13
+G+A V GLA L
Sbjct: 226 SGIALVATGLAKL 238
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 1 AGVAGVGAGLAYL 13
+G+A V GLA L
Sbjct: 226 SGIALVATGLAKL 238
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 AGVAGVGAGLAYLIR 15
A + GVG + LIR
Sbjct: 181 AAIKGVGTMVMELIR 195
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 AGVAGVGAGLAYLIR 15
A V G+G + LIR
Sbjct: 181 AAVKGIGTMVMELIR 195
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTIVMELIR 195
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 AAVKGVGTIVMELIR 195
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 1 AGVAGVGAGLAYLIR 15
A + GVG + LIR
Sbjct: 181 AAIKGVGTMVMELIR 195
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + L+R
Sbjct: 181 AAVKGVGTMVMELVR 195
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + L+R
Sbjct: 181 AAVKGVGTMVMELVR 195
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + L+R
Sbjct: 181 AAVKGVGTMVMELVR 195
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 1 AGVAGVGAGLAYLIR 15
A V GVG + LIR
Sbjct: 181 ATVKGVGTMVMELIR 195
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 AGVAGVGAGL 10
A V G GAG+
Sbjct: 590 AAVNGAGAGI 599
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AGVAGVGAGL 10
A V G GAG+
Sbjct: 590 AAVNGAGAGI 599
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 4 AGVGAGLAYLI 14
AGVG G L+
Sbjct: 465 AGVGTGTTALV 475
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 4 AGVGAGLAYLI 14
AGVG G L+
Sbjct: 465 AGVGTGTTALV 475
>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2
Query: 4 AGVGAGLA 11
AG G GLA
Sbjct: 380 AGAGPGLA 387
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 7 GAGLAYLI 14
GAGLA+ I
Sbjct: 2474 GAGLAFSI 2481
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 7 GAGLAYLI 14
GAGLA+ I
Sbjct: 2474 GAGLAFSI 2481
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 7 GAGLAYLI 14
GAGLA+ I
Sbjct: 2474 GAGLAFSI 2481
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 7 GAGLAYLI 14
GAGLA+ I
Sbjct: 2474 GAGLAFSI 2481
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 4 AGVGAGLAYLI 14
AGVG G L+
Sbjct: 465 AGVGTGTTALV 475
>sp|UL26_HCMVA|TEGUMENT protein UL26|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AGVAGVGAGLAYLI 14
AGVA G+ L Y I
Sbjct: 116 AGVAADGSVLCYEI 129
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 7 GAGLAYLI 14
G G+AY++
Sbjct: 334 GKGMAYIV 341
>sp|UL26_HCMVM|TEGUMENT protein UL26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AGVAGVGAGLAYLI 14
AGVA G+ L Y I
Sbjct: 116 AGVAADGSVLCYEI 129
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 3 VAGVGAGLAYL 13
V G+GAG+ L
Sbjct: 147 VPGLGAGVGCL 157
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 4 AGVGAGLA 11
AG G GLA
Sbjct: 380 AGAGPGLA 387
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 3 VAGVGAGLAYLI 14
V G+GA YL+
Sbjct: 222 VRGIGAMTLYLL 233
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 VAGVGAGLA 11
+AG GAG++
Sbjct: 1854 IAGYGAGVS 1862
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 GVGAGLAYL 13
GV AG+AY
Sbjct: 354 GVLAGIAYF 362
69|Sequence|341|350|VGAGLAYLIR
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 2 GAGLAYLIR 10
G+GLA+ +R
Sbjct: 234 GSGLAFFMR 242
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 GAGLAYLI 9
GAGLA+ I
Sbjct: 2474 GAGLAFSI 2481
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 GAGLAYLI 9
GAGLA+ I
Sbjct: 2474 GAGLAFSI 2481
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 GAGLAYLI 9
GAGLA+ I
Sbjct: 2474 GAGLAFSI 2481
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 GAGLAYLI 9
GAGLA+ I
Sbjct: 2474 GAGLAFSI 2481
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 2 GAGLAYLI 9
G G+AY++
Sbjct: 334 GKGMAYIV 341
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 2 GAGLAYLI 9
G GLAY +
Sbjct: 335 GKGLAYTV 342
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 VGAGLA 6
VGAGLA
Sbjct: 983 VGAGLA 988
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 VGAGLA 6
VGAGLA
Sbjct: 983 VGAGLA 988
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 VGAGLA 6
VGAGLA
Sbjct: 983 VGAGLA 988
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 VGAGLA 6
VGAGLA
Sbjct: 983 VGAGLA 988
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 VGAGLA 6
VGAGLA
Sbjct: 983 VGAGLA 988
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 VGAGLA 6
VGAGLA
Sbjct: 1830 VGAGLA 1835
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 VGAGLA 6
VGAGLA
Sbjct: 983 VGAGLA 988
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 VGAGLA 6
VGAGLA
Sbjct: 983 VGAGLA 988
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 VGAGLA 6
VGAGLA
Sbjct: 983 VGAGLA 988
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 VGAGLA 6
VGAGLA
Sbjct: 983 VGAGLA 988
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 GAGLAY 7
GAGLA+
Sbjct: 2471 GAGLAF 2476
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 GAGLAY 7
GAGLA+
Sbjct: 2471 GAGLAF 2476
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 GAGLAY 7
GAGLA+
Sbjct: 2471 GAGLAF 2476
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 GAGLAY 7
GAGLA+
Sbjct: 2471 GAGLAF 2476
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 GAGLAY 7
GAGLA+
Sbjct: 2471 GAGLAF 2476
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 GAGLAY 7
GAGLA+
Sbjct: 2477 GAGLAF 2482
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 GAGLAY 7
GAGLA+
Sbjct: 2476 GAGLAF 2481
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 GAGLAY 7
GAGLA+
Sbjct: 2477 GAGLAF 2482
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 5 LAYLIR 10
LAYL+R
Sbjct: 334 LAYLVR 339