1|SequenceR|10|1|PVVGAALVKM
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 1 PVVGAAL 7
PVVGAA+
Sbjct: 31 PVVGAAI 37
2|SequenceR|15|6|LVLLLPVVGA
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 LVLLLPVVGA 10
L+ +PVVGA
Sbjct: 133 LMWYIPVVGA 142
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 5 LPVVGA 10
+PVVGA
Sbjct: 137 IPVVGA 142
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 5 LPVVGA 10
+PVVGA
Sbjct: 137 IPVVGA 142
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 1 LVLLLPVV 8
L+LLLPV+
Sbjct: 282 LILLLPVI 289
3|SequenceR|20|11|GHKWHLVLLL
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GHKWHLV 7
GH+W +V
Sbjct: 6055 GHRWDVV 6061
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 HKWHLVLLL 10
H W VLLL
Sbjct: 490 HGWATVLLL 498
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 3 KWHLVLLL 10
+W +VLLL
Sbjct: 253 RWGMVLLL 260
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 3 KWHLVLL 9
KW +VLL
Sbjct: 271 KWGMVLL 277
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 HKWHLV 7
+ WHLV
Sbjct: 1420 NSWHLV 1425
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 HKWHLV 7
+ WHLV
Sbjct: 1420 NSWHLV 1425
>sp|PG077_VAR67|TELOMERE-BINDING protein OPG077|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 GHKWHL 6
GH +HL
Sbjct: 146 GHTYHL 151
>sp|PG077_VACCT|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Tian Tan)
Query: 1 GHKWHL 6
GH +HL
Sbjct: 146 GHTYHL 151
>sp|PG077_VACCP|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 GHKWHL 6
GH +HL
Sbjct: 146 GHTYHL 151
>sp|PG077_VACCC|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GHKWHL 6
GH +HL
Sbjct: 146 GHTYHL 151
>sp|PG077_VACCA|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GHKWHL 6
GH +HL
Sbjct: 146 GHTYHL 151
>sp|PG077_MONPZ|TELOMERE-BINDING protein OPG077|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 GHKWHL 6
GH +HL
Sbjct: 146 GHTYHL 151
>sp|PG077_MONPV|TELOMERE-BINDING protein OPG077|Monkeypox virus (MPXV)
Query: 1 GHKWHL 6
GH +HL
Sbjct: 146 GHTYHL 151
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 2 HKWHLVLLL 10
H W +LLL
Sbjct: 490 HGWATMLLL 498
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 2 HKWHLVLLL 10
H W +LLL
Sbjct: 490 HGWATMLLL 498
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 HKWHLVLLL 10
H W +LLL
Sbjct: 490 HGWATMLLL 498
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GHKWHLVL 8
G KW++ L
Sbjct: 336 GEKWNMTL 343
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 1 GHKWHL 6
GH W+L
Sbjct: 153 GHDWYL 158
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GHKWHL 6
GH W+L
Sbjct: 724 GHLWNL 729
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GHKWHL 6
GH W+L
Sbjct: 724 GHLWNL 729
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 GHKWHLV 7
G KW +V
Sbjct: 6093 GQKWDIV 6099
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 GHKWHLV 7
G KW +V
Sbjct: 6143 GQKWDIV 6149
4|SequenceR|25|16|LPSGAGHKWH
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 PSGAGHKW 9
P G G+KW
Sbjct: 283 PGGLGYKW 290
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 SGAGHKW 9
+G GHKW
Sbjct: 218 TGRGHKW 224
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 SGAGHKW 9
+G GHKW
Sbjct: 219 TGRGHKW 225
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 SGAGHKW 9
+G GHKW
Sbjct: 218 TGRGHKW 224
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 SGAGHKW 9
+G GHKW
Sbjct: 218 TGRGHKW 224
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 SGAGHKW 9
+G GHKW
Sbjct: 219 TGRGHKW 225
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 2 PSGAGHKWH 10
PSG+GH H
Sbjct: 248 PSGSGHTTH 256
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 173 PSGSGH 178
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 173 PSGSGH 178
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LPSGAGHKWH 10
LP+ H++H
Sbjct: 975 LPTAFAHEYH 984
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LPSGAGHKWH 10
LP+ H++H
Sbjct: 975 LPTAFAHEYH 984
>sp|NSS_TOSV|NON-STRUCTURAL protein NS-S|Toscana virus (Tos)
Query: 3 SGAGHK 8
SG+GHK
Sbjct: 12 SGSGHK 17
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 LPSGAGHK 8
+P+GAG+K
Sbjct: 79 VPNGAGNK 86
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 SGAGHKW 9
+G GH+W
Sbjct: 218 TGRGHQW 224
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 2 PSGAGHKW 9
P+G H W
Sbjct: 29 PAGKTHIW 36
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 PSGAGHKWH 10
PSG+GH H
Sbjct: 261 PSGSGHIGH 269
>sp|NCAP_TOSV|NUCLEOPROTEIN virus (Tos)
Query: 1 LPSGAG 6
LP+GAG
Sbjct: 163 LPNGAG 168
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 PSGAGHKWH 10
PSG+GH H
Sbjct: 261 PSGSGHIDH 269
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 PSGAGHKWH 10
PSG+GH H
Sbjct: 261 PSGSGHIDH 269
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 PSGAGHKWH 10
PSG+GH H
Sbjct: 254 PSGSGHIDH 262
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 GAGHKW 9
G G+KW
Sbjct: 285 GLGYKW 290
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 4 GAGHKW 9
G G+KW
Sbjct: 285 GLGYKW 290
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 GAGHKW 9
G G+KW
Sbjct: 286 GLGYKW 291
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 4 GAGHKW 9
G G+KW
Sbjct: 285 GLGYKW 290
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 GAGHKW 9
G G+KW
Sbjct: 285 GLGYKW 290
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 GAGHKW 9
G G+KW
Sbjct: 285 GLGYKW 290
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 4 GAGHKW 9
G G+KW
Sbjct: 285 GLGYKW 290
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 GAGHKW 9
G G+KW
Sbjct: 286 GLGYKW 291
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 GAGHKW 9
G G+KW
Sbjct: 285 GLGYKW 290
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 GAGHKW 9
G G+KW
Sbjct: 286 GLGYKW 291
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 GAGHKW 9
G G+KW
Sbjct: 285 GLGYKW 290
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 GAGHKW 9
G G+KW
Sbjct: 285 GLGYKW 290
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 GAGHKW 9
G G+KW
Sbjct: 285 GLGYKW 290
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 GAGHKW 9
G G+KW
Sbjct: 286 GLGYKW 291
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 4 GAGHKW 9
G G+KW
Sbjct: 285 GLGYKW 290
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 4 GAGHKW 9
G G+KW
Sbjct: 285 GLGYKW 290
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 GAGHKW 9
G G+KW
Sbjct: 286 GLGYKW 291
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 GAGHKW 9
G G+KW
Sbjct: 285 GLGYKW 290
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 GAGHKW 9
G G+KW
Sbjct: 286 GLGYKW 291
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 GAGHKW 9
G G+KW
Sbjct: 285 GLGYKW 290
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 4 GAGHKW 9
G G+KW
Sbjct: 285 GLGYKW 290
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 GAGHKW 9
G G+KW
Sbjct: 286 GLGYKW 291
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 6 GHKW 9
GHKW
Sbjct: 429 GHKW 432
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 2 PSGAGHK 8
PSG+GH
Sbjct: 248 PSGSGHN 254
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 2 PSGAGHK 8
PSG+GH
Sbjct: 248 PSGSGHN 254
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 259 PSGSGH 264
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 2 PSGAGHK 8
PSG+GH
Sbjct: 248 PSGSGHN 254
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 259 PSGSGH 264
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 259 PSGSGH 264
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 259 PSGSGH 264
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 259 PSGSGH 264
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 259 PSGSGH 264
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 259 PSGSGH 264
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 254 PSGSGH 259
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 261 PSGSGH 266
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 254 PSGSGH 259
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 261 PSGSGH 266
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 248 PSGSGH 253
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 248 PSGSGH 253
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 259 PSGSGH 264
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 6 GHKW 9
GH+W
Sbjct: 6055 GHRW 6058
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 259 PSGSGH 264
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 PSGAGH 7
PSG+GH
Sbjct: 259 PSGSGH 264
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 PSGAGHKW 9
P GH+W
Sbjct: 681 PFSPGHEW 688
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 3 SGAGHKW 9
+G GH+W
Sbjct: 218 TGRGHQW 224
>sp|LF2_EBVG|PROTEIN LF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LPSGAGH 7
LP+GA H
Sbjct: 204 LPAGAAH 210
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LPSGAGHKWH 10
+P G G W+
Sbjct: 159 IPLGRGGAWY 168
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LPSGAGHKWH 10
+P G G W+
Sbjct: 159 IPLGRGGAWY 168
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LPSGAGHKWH 10
+P G G W+
Sbjct: 159 IPLGRGGAWY 168
>sp|VPR_HV2KR|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 2 PSGAGHKW 9
P G G +W
Sbjct: 16 PRGPGDEW 23
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 PSGAGHKW 9
P GH W
Sbjct: 681 PFSPGHSW 688
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 2 PSGAGH 7
PSG GH
Sbjct: 259 PSGTGH 264
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 2 PSGAGH 7
PSG GH
Sbjct: 259 PSGTGH 264
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 2 PSGAGH 7
PSG GH
Sbjct: 259 PSGTGH 264
5|SequenceR|30|21|VPTIPLPSGA
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VPTIPLPSGA 10
VPT PLP+ +
Sbjct: 1892 VPTQPLPNAS 1901
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 VPTIPLPSGA 10
VPT PLP+ +
Sbjct: 1892 VPTQPLPNAS 1901
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PTIPLPS 8
P IP+PS
Sbjct: 485 PNIPIPS 491
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PTIPLPS 8
P IP+PS
Sbjct: 485 PNIPIPS 491
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 VPTIPLPSGA 10
+PT+PL +G+
Sbjct: 2013 IPTLPLFNGS 2022
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 3 TIPLPSG 9
+IPLP+G
Sbjct: 575 SIPLPNG 581
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 TIPLPSG 9
+IPLP+G
Sbjct: 575 SIPLPNG 581
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 2 PTIPLPSGA 10
P P+P+GA
Sbjct: 3 PFAPVPAGA 11
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PTIPLPSGA 10
P P+P+GA
Sbjct: 3 PFAPVPAGA 11
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 2 PTIPLPSG 9
P+IP PSG
Sbjct: 121 PSIPTPSG 128
>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58
Query: 2 PTIPLPSG 9
P+IP PSG
Sbjct: 121 PSIPTPSG 128
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 3 TIPLPSG 9
T+P PSG
Sbjct: 443 TVPCPSG 449
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 TIPLPSGA 10
++P+PSGA
Sbjct: 786 SVPVPSGA 793
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 TIPLPSGA 10
++P+PSGA
Sbjct: 786 SVPVPSGA 793
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 TIPLPSGA 10
++P+PSGA
Sbjct: 786 SVPVPSGA 793
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 2 PTIPLPSG 9
PT+P P G
Sbjct: 605 PTLPSPYG 612
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PTIPLPSGA 10
P +P P+GA
Sbjct: 406 PEVPRPAGA 414
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 VPTIPLPSG 9
VPT +PSG
Sbjct: 3294 VPTAWVPSG 3302
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 VPTIPLPSG 9
VP++P P+G
Sbjct: 757 VPSVPEPAG 765
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 VPTIPLPSG 9
VPT +PSG
Sbjct: 3294 VPTAWVPSG 3302
>sp|GQ2_HHV6Z|GLYCOPROTEIN Q2|Human herpesvirus 6B (strain Z29)
Query: 2 PTIPLPSG 9
PT+P P G
Sbjct: 171 PTLPSPYG 178
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VPTIPLPSGA 10
+P P PSGA
Sbjct: 445 LPRDPSPSGA 454
>sp|VP6_ROTGA|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 4 IPLPSG 9
IP+P+G
Sbjct: 229 IPMPAG 234
>sp|MC007_MCV1|PROTEIN MC007|Molluscum contagiosum virus subtype 1
Query: 1 VPTIPLPSGA 10
V +P PSGA
Sbjct: 122 VLCVPEPSGA 131
>sp|VP6_ROTGI|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Rat/United
Query: 1 VPTIPLPSG 9
V IP+P+G
Sbjct: 226 VIMIPMPTG 234
>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)
Query: 2 PTIPLPSG 9
PT+ LP G
Sbjct: 222 PTMQLPDG 229
6|SequenceR|35|26|ACTANVPTIP
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 TANVPTI 9
T+NVPTI
Sbjct: 1874 TSNVPTI 1880
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 TANVPTI 9
T+NVPTI
Sbjct: 1874 TSNVPTI 1880
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CTANVP 7
CT NVP
Sbjct: 590 CTTNVP 595
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N+P P
Sbjct: 583 GCTLNLPISP 592
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CTANVP 7
CT NVP
Sbjct: 594 CTTNVP 599
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CTANVP 7
CT NVP
Sbjct: 594 CTTNVP 599
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CTANVP 7
CT NVP
Sbjct: 580 CTTNVP 585
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CTANVP 7
CT NVP
Sbjct: 601 CTTNVP 606
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CTANVP 7
CT NVP
Sbjct: 607 CTTNVP 612
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 576 GCTLNFPVSP 585
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 4 ANVPTIP 10
AN+PT P
Sbjct: 99 ANLPTAP 105
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CTANVP 7
CT NVP
Sbjct: 590 CTTNVP 595
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 2 CTANVP 7
C ANVP
Sbjct: 933 CPANVP 938
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 CTANVP 7
C ANVP
Sbjct: 933 CPANVP 938
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CTANVP 7
C ANVP
Sbjct: 934 CPANVP 939
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 CTANVP 7
C ANVP
Sbjct: 934 CPANVP 939
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 2 CTANVP 7
C ANVP
Sbjct: 934 CPANVP 939
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 583 GCTLNFPISP 592
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 581 GCTLNFPISP 590
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CTANVP 7
CT NVP
Sbjct: 596 CTTNVP 601
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CTANVP 7
CT NVP
Sbjct: 599 CTTNVP 604
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CTANVP 7
CT NVP
Sbjct: 593 CTTNVP 598
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CTANVP 7
CT NVP
Sbjct: 598 CTTNVP 603
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 582 GCTLNFPISP 591
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 577 GCTLNFPISP 586
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 582 GCTLNFPISP 591
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 575 GCTLNFPISP 584
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 579 GCTLNFPISP 588
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 577 GCTLNFPISP 586
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 587 GCTLNFPISP 596
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 584 GCTLNFPISP 593
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 579 GCTLNFPISP 588
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 586 GCTLNFPISP 595
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 588 GCTLNFPISP 597
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 582 GCTLNFPISP 591
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 578 GCTLNFPISP 587
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 582 GCTLNFPISP 591
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 594 GCTLNFPISP 603
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 582 GCTLNFPISP 591
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 581 GCTLNFPISP 590
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 594 GCTLNFPISP 603
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 592 GCTLNFPISP 601
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 579 GCTLNFPISP 588
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 582 GCTLNFPISP 591
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 582 GCTLNFPISP 591
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 583 GCTLNFPISP 592
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 594 GCTLNFPISP 603
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 580 GCTLNFPISP 589
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 577 GCTLNFPISP 586
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 581 GCTLNFPISP 590
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 582 GCTLNFPISP 591
>sp|PG161_VACCC|PROTEIN OPG161|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CTANVPTIP 10
CTA T+P
Sbjct: 126 CTAESSTLP 134
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 1 ACTANVPT 8
ACT PT
Sbjct: 217 ACTTQAPT 224
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 TANVPTIP 10
T N+P+IP
Sbjct: 355 TLNIPSIP 362
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 583 GCTLNFPISP 592
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ACTANVPTIP 10
CT N P P
Sbjct: 592 GCTLNFPISP 601
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 VPTIP 10
VPTIP
Sbjct: 1609 VPTIP 1613
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 VPTIP 10
VPTIP
Sbjct: 1609 VPTIP 1613
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 VPTIP 10
VPTIP
Sbjct: 1443 VPTIP 1447
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 VPTIP 10
VPTIP
Sbjct: 1609 VPTIP 1613
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 VPTIP 10
VPTIP
Sbjct: 1607 VPTIP 1611
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 VPTIP 10
VPTIP
Sbjct: 1609 VPTIP 1613
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 2 CTANVPTIP 10
C+A PT P
Sbjct: 249 CSAQAPTSP 257
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 CTANVPT 8
CT+N PT
Sbjct: 566 CTSNYPT 572
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 CTANVPT 8
CT+N PT
Sbjct: 566 CTSNYPT 572
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 CTANVPT 8
CT+N PT
Sbjct: 567 CTSNYPT 573
Query: 2 CTANVPTIP 10
C A+V TIP
Sbjct: 1788 CFASVTTIP 1796
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 VPTIP 10
VPTIP
Sbjct: 1609 VPTIP 1613
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 VPTIP 10
VPTIP
Sbjct: 1609 VPTIP 1613
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 VPTIP 10
VPTIP
Sbjct: 1609 VPTIP 1613
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 VPTIP 10
VPTIP
Sbjct: 1609 VPTIP 1613
>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)
Query: 5 NVPTIP 10
N+PT+P
Sbjct: 91 NLPTVP 96
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 5 NVPTIP 10
N+PT+P
Sbjct: 90 NLPTVP 95
>sp|PG176_VAR67|PROTEIN OPG176|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 ACTANVP 7
CT N P
Sbjct: 73 GCTVNTP 79
>sp|K81_HHV8P|PROTEIN K8.1|Human herpesvirus 8 type P
Query: 1 ACTANVPT 8
AC AN PT
Sbjct: 23 ACHANCPT 30
>sp|UL121_HCMVM|MEMBRANE protein UL121|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CTANVPTI 9
C A++PT+
Sbjct: 124 CIAHLPTL 131
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 ACTANVP 7
AC NVP
Sbjct: 6008 ACGTNVP 6014
>sp|VE7_HPV53|PROTEIN E7|Human papillomavirus type 53
Query: 4 ANVPTIP 10
NVPT+P
Sbjct: 3 GNVPTLP 9
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CTANVPTIP 10
C N+PT P
Sbjct: 185 CCPNMPTFP 193
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CTANVPTIP 10
C N+PT P
Sbjct: 185 CCPNMPTFP 193
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CTANVPTIP 10
C N+PT P
Sbjct: 185 CCPNMPTFP 193
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 5 NVPTIP 10
+VPT+P
Sbjct: 66 DVPTVP 71
>sp|UL121_HCMVA|MEMBRANE protein UL121|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CTANVPTI 9
C A++PT+
Sbjct: 124 CIAHLPTL 131
7|SequenceR|40|31|CPHRIACTAN
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 CPHRIACTA 9
CP + CTA
Sbjct: 3278 CPRHVICTA 3286
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CPHRIACTA 9
CP + CTA
Sbjct: 3278 CPRHVICTA 3286
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CPHRIACTAN 10
CP + C+A+
Sbjct: 3284 CPRHVICSAS 3293
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 2 PHRIACTAN 10
PH IAC N
Sbjct: 189 PHSIACAVN 197
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CPHRIACTAN 10
CP + C+A+
Sbjct: 3284 CPRHVICSAS 3293
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 CPHRIACTAN 10
CP R CT++
Sbjct: 1169 CPERCGCTSS 1178
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 CPHRIACTA 9
CP + CT+
Sbjct: 3301 CPRHVICTS 3309
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CPHRIACTA 9
CP + CT+
Sbjct: 3301 CPRHVICTS 3309
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CPHRIAC 7
C H IAC
Sbjct: 82 CKHEIAC 88
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 1 CPHRIACTA 9
CP +AC A
Sbjct: 277 CPEIVACHA 285
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 1 CPHRIACTAN 10
C H AC AN
Sbjct: 339 CVHDAACPAN 348
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 1 CPHRIACTAN 10
C H AC AN
Sbjct: 339 CVHDAACPAN 348
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 CPHRIACTAN 10
CP + C A+
Sbjct: 3285 CPRHVMCPAD 3294
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 CPHRIACTAN 10
CP + C A+
Sbjct: 3285 CPRHVMCPAD 3294
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 CPHRIACTAN 10
CP + C+++
Sbjct: 3372 CPRHVICSSS 3381
>sp|PRO_ADE04|PROTEASE adenovirus E serotype 4
Query: 2 PHRIAC 7
PH++AC
Sbjct: 37 PHKVAC 42
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 CPHRIACTAN 10
CP + C+++
Sbjct: 3372 CPRHVICSSS 3381
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 PHRIACTAN 10
PH I C N
Sbjct: 1584 PHTIPCLCN 1592
>sp|PRO_ADE40|PROTEASE adenovirus F serotype 40
Query: 2 PHRIAC 7
PH++AC
Sbjct: 35 PHKLAC 40
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 CPHRIACTAN 10
CP R +C A+
Sbjct: 679 CPPRDSCAAH 688
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 3 HRIACTAN 10
H I+CT N
Sbjct: 81 HPISCTVN 88
>sp|PRO_ADE02|PROTEASE adenovirus C serotype 2
Query: 2 PHRIAC 7
PH++AC
Sbjct: 35 PHKLAC 40
>sp|PRO_ADE05|PROTEASE adenovirus C serotype 5
Query: 2 PHRIAC 7
PH++AC
Sbjct: 35 PHKLAC 40
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 CPHRIACT 8
C H+ CT
Sbjct: 926 CGHKKPCT 933
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 CPHRIACTAN 10
CP + C ++
Sbjct: 3342 CPRHVICLSS 3351
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 CPHRIACTAN 10
CP + C ++
Sbjct: 3322 CPRHVICLSS 3331
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 CPHRIACT 8
C H + C+
Sbjct: 190 CAHELVCS 197
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CPHRIACT 8
C H + C+
Sbjct: 200 CAHELVCS 207
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 CPHRIACTAN 10
CP + C ++
Sbjct: 3342 CPRHVICLSS 3351
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CPHRIACT 8
C H + C+
Sbjct: 200 CAHELVCS 207
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 CPHRIACTAN 10
CP + C ++
Sbjct: 3322 CPRHVICLSS 3331
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 1 CPHRIAC 7
C H AC
Sbjct: 83 CKHETAC 89
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CPHRIACTA 9
CP + CTA
Sbjct: 238 CPCLLPCTA 246
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CPHRIACTA 9
CP + CTA
Sbjct: 238 CPCLLPCTA 246
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CPHRIACTA 9
CP + CTA
Sbjct: 238 CPCLLPCTA 246
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 PHRIACTAN 10
P + CTAN
Sbjct: 763 PWLLGCTAN 771
8|SequenceR|45|36|MLNNHCPHRI
>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)
Query: 2 LNNHCP 7
L NHCP
Sbjct: 81 LGNHCP 86
>sp|GI_HHV23|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain 333)
Query: 2 LNNHCP 7
L NHCP
Sbjct: 81 LGNHCP 86
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 MLNNHCPHR 9
++N H PHR
Sbjct: 512 IINIHTPHR 520
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 3 NNHCPH 8
+NHCP+
Sbjct: 325 DNHCPN 330
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 4 NHCP 7
NHCP
Sbjct: 193 NHCP 196
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 6 CPHRI 10
CPHR+
Sbjct: 452 CPHRL 456
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 6 CPHR 9
CPHR
Sbjct: 1027 CPHR 1030
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 3 NNHCPHRI 10
N H P RI
Sbjct: 30 NQHLPFRI 37
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 LNNHCPHRI 10
L CPH I
Sbjct: 30 LKMECPHTI 38
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 2 LNNHCPHR 9
+NNH P +
Sbjct: 418 INNHAPSK 425
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 1 MLNNHCPH 8
ML+N PH
Sbjct: 311 MLHNFLPH 318
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 MLNNHCPH 8
ML+N PH
Sbjct: 311 MLHNFLPH 318
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 1 MLNNHCPH 8
ML+N PH
Sbjct: 311 MLHNFLPH 318
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 MLNNHCPH 8
ML+N PH
Sbjct: 311 MLHNFLPH 318
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 2 LNNHCPHRI 10
L CPH I
Sbjct: 30 LKMECPHTI 38
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 MLNNHCPH 8
ML+N PH
Sbjct: 311 MLHNFLPH 318
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 MLNNHCPHRI 10
++N H P RI
Sbjct: 1218 IINIHTPFRI 1227
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 2 LNNHCPHRI 10
L CPH I
Sbjct: 30 LKMECPHTI 38
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 MLNNHCPH 8
ML+N PH
Sbjct: 311 MLHNFLPH 318
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 MLNNHCPH 8
ML+N PH
Sbjct: 311 MLHNFLPH 318
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 MLNNHCPH 8
ML+N PH
Sbjct: 303 MLHNFLPH 310
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 MLNNHCPH 8
ML+N PH
Sbjct: 311 MLHNFLPH 318
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 NNHCP 7
N HCP
Sbjct: 697 NGHCP 701
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 LNNHCPHRI 10
L CPH I
Sbjct: 30 LKMECPHTI 38
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 MLNNHCPHRI 10
++N H P RI
Sbjct: 1218 VINIHTPFRI 1227
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 MLNNHCPHRI 10
++N H P RI
Sbjct: 1218 VINIHTPFRI 1227
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 LNNHCPHRI 10
N CP+RI
Sbjct: 1402 FTNICPNRI 1410
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 MLNNHCPHRI 10
++N H P RI
Sbjct: 1218 VINIHTPFRI 1227
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 MLNNHCPHRI 10
++N H P RI
Sbjct: 1218 VINIHTPFRI 1227
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 LNNHCPHRI 10
L CPH I
Sbjct: 25 LKVECPHTI 33
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 4 NHCPH 8
NHC H
Sbjct: 1773 NHCIH 1777
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 4 NHCPH 8
NHC H
Sbjct: 1772 NHCIH 1776
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 4 NHCPH 8
NHC H
Sbjct: 1772 NHCIH 1776
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 4 NHCPH 8
NHC H
Sbjct: 1772 NHCIH 1776
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 4 NHCPH 8
NHC H
Sbjct: 1770 NHCIH 1774
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 LNNHCPHRI 10
+N H P+R+
Sbjct: 1219 VNMHTPYRL 1227
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 LNNHCPHRI 10
N CP+RI
Sbjct: 1402 FTNVCPNRI 1410
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 LNNHCPHRI 10
N CP+RI
Sbjct: 1402 FTNVCPNRI 1410
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 2 LNNHCPH 8
L ++CPH
Sbjct: 322 LVDYCPH 328
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 2 LNNHCP 7
+NNH P
Sbjct: 115 INNHIP 120
>sp|NCAP_BUNLC|NUCLEOPROTEIN La Crosse
Query: 1 MLNNHCP 7
++NNH P
Sbjct: 72 VINNHFP 78
>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United
Query: 1 MLNNHCP 7
++NNH P
Sbjct: 72 VINNHFP 78
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 4 NHCPH 8
NHC H
Sbjct: 1771 NHCIH 1775
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 2 LNNHCP 7
+NNH P
Sbjct: 120 INNHIP 125
>sp|VPAP_HHV6Z|DNA polymerase processivity factor|Human herpesvirus 6B (strain Z29)
Query: 2 LNNHCP 7
+NNH P
Sbjct: 95 INNHIP 100
>sp|NCAP_BUNSH|NUCLEOPROTEIN snowshoe hare
Query: 1 MLNNHCP 7
++NNH P
Sbjct: 72 VVNNHFP 78
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 6 CPHRI 10
CPH I
Sbjct: 29 CPHSI 33
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 NNHCP 7
NN CP
Sbjct: 460 NNECP 464
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 NNHCP 7
NN CP
Sbjct: 460 NNECP 464
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 NNHCP 7
NN CP
Sbjct: 460 NNECP 464
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 NNHCP 7
NN CP
Sbjct: 460 NNECP 464
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 NNHCP 7
NN CP
Sbjct: 460 NNECP 464
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 NNHCP 7
NN CP
Sbjct: 460 NNECP 464
9|SequenceR|50|41|SRIQNMLNNH
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 RIQNMLNNH 10
RI+N+ N H
Sbjct: 2772 RIENIKNEH 2780
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 RIQNMLNNH 10
RI+N+ N H
Sbjct: 2772 RIENIKNGH 2780
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 3 IQNMLNNH 10
+ N+LN H
Sbjct: 1227 VNNLLNRH 1234
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 3 IQNMLNNH 10
+ N+LN H
Sbjct: 1208 VDNLLNRH 1215
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 3 IQNMLNNH 10
+ N+LN H
Sbjct: 1207 VDNLLNRH 1214
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 3 IQNMLNNH 10
+ N+LN H
Sbjct: 1206 VDNLLNRH 1213
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RIQNMLNNH 10
R+Q +L NH
Sbjct: 211 RLQGLLCNH 219
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RIQNMLNNH 10
R+Q +L NH
Sbjct: 211 RLQGLLCNH 219
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 IQNMLNN 9
++NM+NN
Sbjct: 743 LENMVNN 749
10|SequenceR|55|46|LQALQSRIQN
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 LQALQSRIQN 10
LQAL SR+Q+
Sbjct: 468 LQALPSRLQH 477
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQALQSRIQN 10
LQAL++ IQN
Sbjct: 592 LQALETLIQN 601
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 QALQSRIQ 9
Q LQSR+Q
Sbjct: 577 QYLQSRVQ 584
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LQALQSRIQN 10
LQALQS N
Sbjct: 3924 LQALQSEFVN 3933
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 LQALQSRIQN 10
LQALQS N
Sbjct: 3962 LQALQSEFVN 3971
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 LQALQSRIQN 10
LQALQS N
Sbjct: 3982 LQALQSEFVN 3991
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 LQALQSRIQN 10
LQALQS N
Sbjct: 4012 LQALQSEFVN 4021
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LQALQSRIQN 10
LQALQS N
Sbjct: 3924 LQALQSEFVN 3933
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LQALQSRIQN 10
LQALQS N
Sbjct: 3962 LQALQSEFVN 3971
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LQALQSRIQN 10
LQALQS N
Sbjct: 3982 LQALQSEFVN 3991
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LQALQSRIQN 10
LQALQS N
Sbjct: 4012 LQALQSEFVN 4021
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 LQALQSRIQN 10
+QAL R+QN
Sbjct: 463 IQALPQRLQN 472
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 2 QALQSRIQ 9
+A+Q+RIQ
Sbjct: 507 EAIQNRIQ 514
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LQALQSRIQN 10
LQA S++QN
Sbjct: 1383 LQAKNSKLQN 1392
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 2 QALQSRIQ 9
+A+Q+RIQ
Sbjct: 514 EAIQNRIQ 521
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 2 QALQSRIQ 9
+A+Q+RIQ
Sbjct: 514 EAIQNRIQ 521
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 2 QALQSRIQ 9
+A+Q+RIQ
Sbjct: 514 EAIQNRIQ 521
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 2 QALQSRIQ 9
+A+Q+RIQ
Sbjct: 514 EAIQNRIQ 521
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 2 QALQSRIQ 9
+A+Q+RIQ
Sbjct: 514 EAIQNRIQ 521
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 LQALQSRIQN 10
L ALQ ++QN
Sbjct: 781 LLALQEKVQN 790
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 2 QALQSRIQ 9
+A+Q+RIQ
Sbjct: 514 EAIQNRIQ 521
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 2 QALQSRIQ 9
+A+Q+RIQ
Sbjct: 514 EAIQNRIQ 521
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 2 QALQSRIQ 9
+A+Q+RIQ
Sbjct: 514 EAIQNRIQ 521
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 2 QALQSRIQ 9
+A+Q+RIQ
Sbjct: 514 EAIQNRIQ 521
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 2 QALQSRIQ 9
+A+Q+RIQ
Sbjct: 514 EAIQNRIQ 521
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 LQALQSRIQN 10
L +QS +QN
Sbjct: 99 LLTIQSHVQN 108
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 LQALQSRIQN 10
L +QS +QN
Sbjct: 99 LLTIQSHVQN 108
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 LQALQSRIQN 10
L +QS +QN
Sbjct: 99 LLTIQSHVQN 108
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 LQALQSRIQN 10
L +QS +QN
Sbjct: 99 LLTIQSHVQN 108
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 LQALQSRIQN 10
L +QS +QN
Sbjct: 99 LLTIQSHVQN 108
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 LQALQSRIQN 10
L +QS +QN
Sbjct: 99 LLTIQSHVQN 108
11|SequenceR|60|51|NASGNLQALQ
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 3 SGNLQALQ 10
+GNLQAL+
Sbjct: 346 TGNLQALK 353
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 2 ASGNLQALQ 10
A GN QAL+
Sbjct: 344 ADGNCQALR 352
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NASGNL 6
NASGN+
Sbjct: 2714 NASGNI 2719
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NASGNL 6
NASGN+
Sbjct: 2711 NASGNI 2716
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NASGNL 6
NASGN+
Sbjct: 2714 NASGNI 2719
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NASGNL 6
NASGN+
Sbjct: 2714 NASGNI 2719
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 NASGNL 6
NASGN+
Sbjct: 2714 NASGNI 2719
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NASGNL 6
NASGN+
Sbjct: 2714 NASGNI 2719
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NASGNL 6
NASGN+
Sbjct: 2714 NASGNI 2719
12|SequenceR|65|56|LIFLANASGN
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LIFLANASGN 10
+ +L+NASGN
Sbjct: 2709 MYWLSNASGN 2718
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 2 IFLANASG 9
I++ANASG
Sbjct: 762 IYVANASG 769
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 2 IFLANASG 9
I++ANASG
Sbjct: 762 IYVANASG 769
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 2 IFLANASG 9
I++ANASG
Sbjct: 762 IYVANASG 769
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 2 IFLANAS 8
IFLANAS
Sbjct: 54 IFLANAS 60
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 IFLANAS 8
IFLANAS
Sbjct: 54 IFLANAS 60
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 1 LIFLANASGN 10
++F++N SG+
Sbjct: 196 IVFVSNGSGD 205
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 2 IFLANASG 9
+++ANASG
Sbjct: 762 VYVANASG 769
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LIFLANASGN 10
+ +++NASGN
Sbjct: 2709 MYWVSNASGN 2718
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LIFLANASGN 10
+ +++NASGN
Sbjct: 2706 MYWVSNASGN 2715
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LIFLANASGN 10
+ +++NASGN
Sbjct: 2709 MYWVSNASGN 2718
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 LIFLANASGN 10
+ +++NASGN
Sbjct: 2709 MYWVSNASGN 2718
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LIFLANASGN 10
+ +++NASGN
Sbjct: 2709 MYWVSNASGN 2718
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LIFLANASGN 10
+ +++NASGN
Sbjct: 2709 MYWVSNASGN 2718
>sp|PG122_VACCC|MRNA-DECAPPING protein OPG122|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LIFLANASGN 10
LIFL SGN
Sbjct: 203 LIFLDPNSGN 212
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 2 IFLANASG 9
+++ANASG
Sbjct: 762 MYVANASG 769
>sp|PG122_VAR67|MRNA-DECAPPING protein OPG122|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LIFLANASGN 10
LIFL SGN
Sbjct: 203 LIFLDPNSGN 212
>sp|PG122_MONPV|MRNA-DECAPPING protein OPG122|Monkeypox virus (MPXV)
Query: 1 LIFLANASGN 10
LIFL SGN
Sbjct: 203 LIFLDPNSGN 212
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LIFLANASGN 10
L++L A GN
Sbjct: 156 LVYLGRARGN 165
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 3 FLANASG 9
++ANASG
Sbjct: 763 YVANASG 769
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 3 FLANASG 9
++ANASG
Sbjct: 763 YVANASG 769
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 3 FLANAS 8
FLANAS
Sbjct: 55 FLANAS 60
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 3 FLANAS 8
FLANAS
Sbjct: 55 FLANAS 60
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 FLANAS 8
FLANAS
Sbjct: 55 FLANAS 60
>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)
Query: 3 FLANAS 8
FLANAS
Sbjct: 55 FLANAS 60
13|SequenceR|70|61|QATYYLIFLA
>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)
Query: 1 QATYYLIFLA 10
+ATY++I +A
Sbjct: 275 EATYHIIIMA 284
>sp|PG190_VACCT|PROTEIN OPG190|Vaccinia virus (strain Tian Tan)
Query: 1 QATYYLIFLA 10
+ATY++I +A
Sbjct: 275 EATYHIIMVA 284
>sp|PG190_VACCL|PROTEIN OPG190|Vaccinia virus (strain Lister) (VACV)
Query: 1 QATYYLIFLA 10
+ATY++I +A
Sbjct: 275 EATYHIIIVA 284
>sp|PG190_VACCC|PROTEIN OPG190|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 QATYYLIFLA 10
+ATY++I +A
Sbjct: 275 EATYHIIIVA 284
>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)
Query: 1 QATYYLIFLA 10
+ATY++I +A
Sbjct: 275 EATYHIIIVA 284
>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)
Query: 1 QATYYLIFLA 10
+ATY++I +A
Sbjct: 275 EATYHIIIVA 284
>sp|SCP_HHV8P|SMALL capsomere-interacting protein|Human herpesvirus 8 type P
Query: 1 QATYYLIFL 9
Q +YL+FL
Sbjct: 44 QKRHYLVFL 52
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ATYYLIFLA 10
+ YY +FLA
Sbjct: 832 SPYYKVFLA 840
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ATYYLIFLA 10
+ YY +FLA
Sbjct: 832 SPYYKVFLA 840
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 QATYY 5
QATYY
Sbjct: 906 QATYY 910
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 3 TYYLIF 8
TYYL++
Sbjct: 315 TYYLVY 320
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas)
Query: 1 QATYYLIFL 9
Q +YY IF+
Sbjct: 74 QRSYYPIFV 82
14|SequenceR|75|66|PFPEGQATYY
>sp|BZLF1_EBVG|LYTIC switch protein BZLF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PFPEGQATYY 10
P P+GQ T Y
Sbjct: 55 PLPQGQLTAY 64
>sp|BZLF1_EBVB9|LYTIC switch protein BZLF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PFPEGQATYY 10
P P+GQ T Y
Sbjct: 55 PLPQGQLTAY 64
>sp|BZLF1_EBVA8|LYTIC switch protein BZLF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PFPEGQATYY 10
P P+GQ T Y
Sbjct: 55 PLPQGQLTAY 64
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 PFPEGQATYY 10
PF EG+A ++
Sbjct: 2189 PFSEGKALFH 2198
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 PFPEGQATYY 10
PF EG+A ++
Sbjct: 2189 PFSEGKALFH 2198
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 PFPEGQATYY 10
PF EG+A ++
Sbjct: 2189 PFSEGKALFH 2198
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 PFPEGQATYY 10
PF EG+A ++
Sbjct: 2189 PFSEGKALFH 2198
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 2 FPEGQATY 9
FPE +ATY
Sbjct: 107 FPEEEATY 114
>sp|PG166_VARV|PROTEIN OPG166|Variola virus
Query: 2 FPEGQATYY 10
FP Q YY
Sbjct: 269 FPSTQRDYY 277
>sp|PG166_VAR67|PROTEIN OPG166|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 FPEGQATYY 10
FP Q YY
Sbjct: 269 FPSTQRDYY 277
>sp|PG166_VACCC|PROTEIN OPG166|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 FPEGQATYY 10
FP Q YY
Sbjct: 269 FPSTQRDYY 277
>sp|PG166_MONPV|PROTEIN OPG166|Monkeypox virus (MPXV)
Query: 2 FPEGQATYY 10
FP Q YY
Sbjct: 269 FPSTQRDYY 277
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 PFPEGQA 7
PF EG+A
Sbjct: 2416 PFREGEA 2422
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 PFPEGQA 7
PF EG+A
Sbjct: 2416 PFGEGEA 2422
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 PFPEGQA 7
PF EG+A
Sbjct: 2416 PFGEGEA 2422
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 PFPEGQA 7
PF EG+A
Sbjct: 2416 PFGEGEA 2422
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 PFPEGQA 7
PF EG+A
Sbjct: 2416 PFGEGEA 2422
>sp|REV_HV2D1|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 PFPEGQAT 8
P+P GQ T
Sbjct: 25 PYPHGQGT 32
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 PFPEGQ 6
P PEG+
Sbjct: 1834 PIPEGE 1839
>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52
Query: 4 EGQATYY 10
EGQ YY
Sbjct: 149 EGQVDYY 155
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 4 EGQATYY 10
EGQ YY
Sbjct: 149 EGQVDYY 155
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 1 PFPEGQATY 9
P P G+A Y
Sbjct: 660 PAPNGKAQY 668
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 EGQATYY 10
EG+ TYY
Sbjct: 1044 EGRETYY 1050
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 4 EGQATYY 10
EGQ T+Y
Sbjct: 164 EGQKTFY 170
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 PEGQA 7
PEGQA
Sbjct: 607 PEGQA 611
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 FPEGQA 7
FP+G+A
Sbjct: 437 FPQGEA 442
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 3 PEGQATYY 10
PE ATY+
Sbjct: 146 PEALATYH 153
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 2 FPEGQATYY 10
PE ATY+
Sbjct: 134 VPEALATYH 142
15|SequenceR|80|71|KDLNNPFPEG
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 DLNNPFPEG 10
D+ NPFP+G
Sbjct: 2414 DVINPFPDG 2422
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 DLNNPFPEG 10
D+ NPFP+G
Sbjct: 2414 DVINPFPDG 2422
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 2 DLNNPFP 8
+ NNPFP
Sbjct: 580 EFNNPFP 586
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 KDLNNPFPE 9
++++NPFP+
Sbjct: 1765 ENMDNPFPQ 1773
Query: 1 KDLNNPFPE 9
+D N P P+
Sbjct: 502 RDANRPLPQ 510
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 KDLNNPFPE 9
++++NPFP+
Sbjct: 1765 ENMDNPFPQ 1773
Query: 1 KDLNNPFPE 9
+D N P P+
Sbjct: 502 RDANRPLPQ 510
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 KDLNNPFPE 9
++++NPFP+
Sbjct: 1765 ENMDNPFPQ 1773
Query: 1 KDLNNPFPE 9
+D N P P+
Sbjct: 502 RDANRPLPQ 510
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 2 DLNNPFP 8
DL+NP P
Sbjct: 781 DLSNPLP 787
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 2 DLNNPFP 8
DL+NP P
Sbjct: 781 DLSNPLP 787
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 3 LNNPFP 8
NNPFP
Sbjct: 582 FNNPFP 587
>sp|NEF_HV2D2|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 KDLNNPFPEG 10
KDLN+P EG
Sbjct: 48 KDLNSPSCEG 57
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 NNPFPE 9
N+PFP+
Sbjct: 1822 NDPFPD 1827
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 1 KDLNNPFPE 9
+ L+NP+P+
Sbjct: 129 ESLHNPYPD 137
>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 KDLNNPFPE 9
+ L+NP+P+
Sbjct: 129 ESLHNPYPD 137
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 KDLNNPFPE 9
+ L+NP+P+
Sbjct: 129 ESLHNPYPD 137
>sp|A49_VARV|PROTEIN A49|Variola virus
Query: 2 DLNNPF 7
+LNNPF
Sbjct: 56 NLNNPF 61
>sp|A49_VAR67|PROTEIN A49|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 DLNNPF 7
+LNNPF
Sbjct: 56 NLNNPF 61
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 1 KDLNNPFPE 9
+ L+NP+P+
Sbjct: 129 ESLHNPYPD 137
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 KDLNNPFPE 9
+ L+NP+P+
Sbjct: 129 ESLHNPYPD 137
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 1 KDLNNPFPE 9
+ L+NP+P+
Sbjct: 129 ESLHNPYPD 137
>sp|NEF_HV2UC|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 KDLNNPFPEG 10
KDLN+P EG
Sbjct: 48 KDLNSPSCEG 57
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 1 KDLNNPFPE 9
+ L+NP+P+
Sbjct: 129 ESLHNPYPD 137
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 1 KDLNNPFPE 9
+ L+NP+P+
Sbjct: 129 ESLHNPYPD 137
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 1 KDLNNPFPE 9
+ L+NP+P+
Sbjct: 129 ESLHNPYPD 137
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 1 KDLNNPFPE 9
+ L+NP+P+
Sbjct: 129 ESLHNPYPD 137
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 KDLNNPFPE 9
+ L+NP+P+
Sbjct: 129 ESLHNPYPD 137
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 KDLNNPFPEG 10
KD+ NP +G
Sbjct: 884 KDMENPAQKG 893
Query: 4 NNPFP 8
+NPFP
Sbjct: 1826 DNPFP 1830
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 KDLNNPFPE 9
+ L+NP+P+
Sbjct: 129 ESLHNPYPD 137
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 KDLNNPFPE 9
+ L+NP+P+
Sbjct: 129 ESLHNPYPD 137
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 1 KDLNNPFPE 9
+ L+NP+P+
Sbjct: 129 ESLHNPYPD 137
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 4 NNPFPE 9
++PFPE
Sbjct: 1828 SDPFPE 1833
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 4 NNPFPE 9
++PFPE
Sbjct: 1824 SDPFPE 1829
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 4 NNPFPE 9
++PFPE
Sbjct: 1828 SDPFPE 1833
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 2 DLNNPFPEG 10
DLN+P P G
Sbjct: 540 DLNHPPPRG 548
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 DLNNPFPEG 10
DLN+P P G
Sbjct: 540 DLNHPPPRG 548
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 5 NPFPEG 10
NP P+G
Sbjct: 2416 NPIPDG 2421
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 3 LNNPFPE 9
L NP+P+
Sbjct: 131 LQNPYPD 137
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 2 DLNNPFP 8
+ NPFP
Sbjct: 543 EFKNPFP 549
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 LNNPFPE 9
L+NPF E
Sbjct: 3331 LDNPFME 3337
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 KDLNNPFPE 9
+D+NN F E
Sbjct: 67 RDINNEFME 75
>sp|REV_HV2SB|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 5 NPFPEG 10
NP+P+G
Sbjct: 24 NPYPQG 29
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 KDLNNPFPE 9
+D+NN F E
Sbjct: 67 QDINNEFME 75
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 KDLNNPFPE 9
+D+NN F E
Sbjct: 67 QDINNEFME 75
>sp|REV_HV2CA|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 5 NPFPEG 10
NP+P+G
Sbjct: 24 NPYPQG 29
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 2 DLNNPF 7
DLN+PF
Sbjct: 458 DLNDPF 463
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 2 DLNNPF 7
DLN+PF
Sbjct: 458 DLNDPF 463
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 KDLNNPFPE 9
+D+NN F E
Sbjct: 67 QDINNEFME 75
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 NNPFPEG 10
+NP P+G
Sbjct: 14 DNPHPKG 20
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 2 DLNNPF 7
DLN+PF
Sbjct: 458 DLNDPF 463
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 2 DLNNPF 7
DLN+PF
Sbjct: 458 DLNDPF 463
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 4 NNPFPEG 10
+NP P+G
Sbjct: 14 DNPHPKG 20
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 2 DLNNP 6
D+NNP
Sbjct: 440 DINNP 444
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 4 NNPFPEG 10
+NP P+G
Sbjct: 14 DNPHPKG 20
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 2 DLNNPF 7
DLN+PF
Sbjct: 458 DLNDPF 463
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 NNPFPEG 10
+NP P+G
Sbjct: 14 DNPHPKG 20
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 4 NNPFPEG 10
+NP P+G
Sbjct: 14 DNPHPKG 20
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 KDLNNPFPE 9
+D+NN F E
Sbjct: 67 QDVNNEFME 75
>sp|REV_HV2G1|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 4 NNPFPEG 10
NP+P G
Sbjct: 23 TNPYPHG 29
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 KDLNNPFPE 9
+D+NN F E
Sbjct: 67 QDVNNEFME 75
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 2 DLNNPFPEG 10
D +NP P G
Sbjct: 888 DDDNPHPHG 896
16|SequenceR|85|76|NPGCLKDLNN
>sp|TRX2_HHV11|TRIPLEX capsid protein 2|Human herpesvirus 1 (strain 17)
Query: 1 NPGCLKDLN 9
NPG L DLN
Sbjct: 169 NPGGLPDLN 177
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 PGCLKDL 8
P CLKD+
Sbjct: 152 PDCLKDM 158
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 NPGCL 5
NPGCL
Sbjct: 573 NPGCL 577
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 NPGCL 5
NPGCL
Sbjct: 573 NPGCL 577
>sp|TRX2_HHV2H|TRIPLEX capsid protein 2|Human herpesvirus 2 (strain HG52)
Query: 2 PGCLKDLN 9
PG L DLN
Sbjct: 170 PGELPDLN 177
>sp|PG070_VACCC|PROTEIN OPG070|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PGCLKDLNN 10
P C+KD+++
Sbjct: 197 PICIKDIDH 205
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 GCLKDLNN 10
CL D+NN
Sbjct: 519 ACLIDINN 526
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 1 NPGCLKDL 8
NP L+DL
Sbjct: 170 NPASLEDL 177
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 NPGCLKD 7
NP C+++
Sbjct: 2109 NPSCMQE 2115
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 PGCLKDLNN 10
P C +DL N
Sbjct: 88 PNCNQDLFN 96
Query: 4 CLKDLNN 10
CL+D N+
Sbjct: 127 CLRDTNS 133
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 PGCLKDLNN 10
P C +DL N
Sbjct: 88 PNCNQDLFN 96
Query: 4 CLKDLNN 10
CL+D N+
Sbjct: 127 CLRDTNS 133
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 PGCLKDLNN 10
P C +DL N
Sbjct: 88 PNCNQDLFN 96
Query: 4 CLKDLNN 10
CL+D N+
Sbjct: 127 CLRDTNS 133
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 1 NPGCLKDLNN 10
+PG +DL+N
Sbjct: 493 SPGQSQDLDN 502
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 2 PGCLKD 7
PG LKD
Sbjct: 515 PGLLKD 520
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PGCLKD 7
PG LKD
Sbjct: 515 PGLLKD 520
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PGCLKD 7
PG LKD
Sbjct: 515 PGLLKD 520
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 2 PGCLKD 7
PG LKD
Sbjct: 515 PGLLKD 520
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 2 PGCLKD 7
PG LKD
Sbjct: 515 PGLLKD 520
>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)
Query: 4 CLKDLN 9
C+KD+N
Sbjct: 478 CIKDIN 483
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 3 GCLKDLNN 10
CL D+NN
Sbjct: 519 ACLIDINN 526
>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CLKDLN 9
C+KD+N
Sbjct: 475 CIKDIN 480
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 1 NPGCLKDLN 9
NP L+D N
Sbjct: 390 NPSVLEDWN 398
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 1 NPGCLKDLN 9
NP L+D N
Sbjct: 390 NPSVLEDWN 398
17|SequenceR|90|81|PFDTVNPGCL
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 6 NPGCL 10
NPGCL
Sbjct: 573 NPGCL 577
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 6 NPGCL 10
NPGCL
Sbjct: 573 NPGCL 577
>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65
Query: 1 PFDTVNPG 8
P D VNPG
Sbjct: 101 PVDVVNPG 108
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 1 PFDTVNP 7
P DTVNP
Sbjct: 103 PIDTVNP 109
>sp|BEL1_SFV3L|PROTEIN Bel-1|Simian foamy virus type 3
Query: 1 PFDTVNPGCL 10
PF+ PGCL
Sbjct: 247 PFNMDPPGCL 256
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 1 PFDTVNP 7
P DTVNP
Sbjct: 103 PIDTVNP 109
>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49
Query: 1 PFDTVNP 7
P DTVNP
Sbjct: 103 PIDTVNP 109
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 PFDTVNPGC 9
P V+PGC
Sbjct: 256 PDPIVDPGC 264
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 PFDTVNPGC 9
P V+PGC
Sbjct: 256 PDPIVDPGC 264
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 PFDTVNPGC 9
P V+PGC
Sbjct: 256 PDPIVDPGC 264
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 1 PFDTVNP 7
P D VNP
Sbjct: 446 PMDNVNP 452
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 1 PFDTVNP 7
P D VNP
Sbjct: 519 PMDNVNP 525
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 1 PFDTVNP 7
P D VNP
Sbjct: 513 PMDNVNP 519
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 2 FDTVNP 7
DTVNP
Sbjct: 481 LDTVNP 486
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 FDTVNP 7
DTVNP
Sbjct: 481 LDTVNP 486
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 1 PFDTVNP 7
P D VNP
Sbjct: 501 PMDNVNP 507
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 1 PFDTVNP 7
P D VNP
Sbjct: 499 PMDNVNP 505
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 1 PFDTVNP 7
P D VNP
Sbjct: 520 PMDNVNP 526
>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19
Query: 1 PFDTVNP 7
P DT+NP
Sbjct: 102 PVDTLNP 108
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PFDTVNP 7
PF T NP
Sbjct: 762 PFRTKNP 768
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 5 VNPGCL 10
VNP CL
Sbjct: 828 VNPSCL 833
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 5 VNPGCL 10
VNP CL
Sbjct: 828 VNPSCL 833
>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4
Query: 1 PFDTVNP 7
P D VNP
Sbjct: 411 PMDNVNP 417
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 5 VNPGCL 10
+NP CL
Sbjct: 947 INPSCL 952
>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25
Query: 1 PFDTVNP 7
P DT+NP
Sbjct: 102 PVDTLNP 108
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DTVNPGC 9
+TVNP C
Sbjct: 536 NTVNPSC 542
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 1 PFDTVNP 7
P DT+NP
Sbjct: 103 PVDTLNP 109
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 TVNPGCL 10
T+NPG L
Sbjct: 45 TLNPGLL 51
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 TVNPGCL 10
T+NPG L
Sbjct: 45 TLNPGLL 51
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 1 PFDTVNP 7
P DT+NP
Sbjct: 103 PVDTLNP 109
>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15
Query: 1 PFDTVNP 7
P DTV P
Sbjct: 103 PIDTVTP 109
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 FDTVNPG 8
FD V PG
Sbjct: 332 FDAVAPG 338
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 TVNPGCL 10
T+NPG L
Sbjct: 45 TLNPGLL 51
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 FDTVNPG 8
F TV PG
Sbjct: 4772 FQTVKPG 4778
>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9
Query: 1 PFDTVNP 7
P DTV P
Sbjct: 103 PLDTVRP 109
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 DTVNP 7
DTVNP
Sbjct: 418 DTVNP 422
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 DTVNP 7
DTVNP
Sbjct: 418 DTVNP 422
Query: 2 FDTVNPG 8
F TV PG
Sbjct: 4810 FQTVKPG 4816
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 5 VNPGC 9
V+PGC
Sbjct: 3250 VSPGC 3254
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 5 VNPGC 9
V+PGC
Sbjct: 3253 VSPGC 3257
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 5 VNPGC 9
V+PGC
Sbjct: 3252 VSPGC 3256
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 5 VNPGC 9
V+PGC
Sbjct: 3252 VSPGC 3256
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 5 VNPGC 9
V+PGC
Sbjct: 3252 VSPGC 3256
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 5 VNPGC 9
V+PGC
Sbjct: 3252 VSPGC 3256
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 5 VNPGC 9
V+PGC
Sbjct: 3254 VSPGC 3258
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 5 VNPGC 9
V+PGC
Sbjct: 3254 VSPGC 3258
>sp|VL2_HPV37|MINOR capsid protein L2|Human papillomavirus 37
Query: 1 PFDTVNP 7
P DTV P
Sbjct: 103 PIDTVTP 109
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 FDTVNPG 8
F TV PG
Sbjct: 4776 FQTVKPG 4782
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 1 PFDTVNP 7
P DT++P
Sbjct: 103 PIDTIDP 109
>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P
Query: 2 FDTVNPGCL 10
D V+P CL
Sbjct: 36 LDVVHPQCL 44
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 1 PFDTVNP 7
P DT++P
Sbjct: 103 PIDTIDP 109
>sp|VL2_HPV17|MINOR capsid protein L2|Human papillomavirus 17
Query: 1 PFDTVNP 7
P DTV P
Sbjct: 103 PIDTVTP 109
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 FDTVNPG 8
F TV PG
Sbjct: 4785 FQTVRPG 4791
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 4 TVNPG 8
T+NPG
Sbjct: 444 TINPG 448
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 4 TVNPG 8
T+NPG
Sbjct: 454 TINPG 458
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 TVNPGCL 10
T+NPG L
Sbjct: 45 TLNPGLL 51
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 1 PFDTVNP 7
P DT++P
Sbjct: 103 PIDTIDP 109
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PFDTVNPG 8
F TV PG
Sbjct: 4798 AFQTVKPG 4805
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 PFDTVNPG 8
F TV PG
Sbjct: 4829 KFQTVKPG 4836
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 PFDTVNPG 8
F TV PG
Sbjct: 4859 KFQTVKPG 4866
>sp|ORF49_HHV8P|PROTEIN ORF49|Human herpesvirus 8 type P
Query: 4 TVNPGC 9
T+NP C
Sbjct: 37 TLNPDC 42
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 5 VNPGC 9
V+PGC
Sbjct: 572 VSPGC 576
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 5 VNPGC 9
V+PGC
Sbjct: 566 VSPGC 570
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 5 VNPGC 9
V+PGC
Sbjct: 572 VSPGC 576
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 5 VNPGC 9
V+PGC
Sbjct: 578 VSPGC 582
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 5 VNPGC 9
V+PGC
Sbjct: 566 VSPGC 570
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 FDTVNPGCL 10
FD P C+
Sbjct: 1699 FDPTRPACV 1707
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 5 VNPGC 9
V+PGC
Sbjct: 579 VSPGC 583
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 5 VNPGC 9
V+PGC
Sbjct: 566 VSPGC 570
18|SequenceR|95|86|NAHFPPFDTV
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 HFPPFD 8
H PPFD
Sbjct: 2299 HIPPFD 2304
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 AHFPPFDTV 10
AHF P DTV
Sbjct: 2222 AHFKPGDTV 2230
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 HFPPFDTV 10
HF PFD +
Sbjct: 2122 HFIPFDVI 2129
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 HFPPFDTV 10
HF PFD +
Sbjct: 2122 HFIPFDVI 2129
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 HFPPFDTV 10
HF PFD +
Sbjct: 2100 HFVPFDVL 2107
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 HFPPFDTV 10
HF PFD +
Sbjct: 2100 HFVPFDVL 2107
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 4 FPPFD 8
+PPFD
Sbjct: 1993 YPPFD 1997
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 HFPPFDTV 10
H PPF TV
Sbjct: 192 HPPPFTTV 199
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 HFPPFDTV 10
H PPF TV
Sbjct: 192 HPPPFTTV 199
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 FPPFDTV 10
F PFD V
Sbjct: 3531 FTPFDVV 3537
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 FPPFDTV 10
F PFD V
Sbjct: 3554 FTPFDVV 3560
>sp|E434_ADE02|EARLY 4 ORF6 protein|Human adenovirus C serotype 2
Query: 4 FPPFDT 9
PPF+T
Sbjct: 30 LPPFET 35
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 FPPFDTV 10
F PFD V
Sbjct: 3531 FTPFDVV 3537
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 FPPFDTV 10
F PFD V
Sbjct: 3554 FTPFDVV 3560
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 AHFPPFDTV 10
A PP DTV
Sbjct: 425 AQCPPGDTV 433
>sp|GD_CHV1|ENVELOPE glycoprotein D|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 1 NAHFPPFD 8
AH PP +
Sbjct: 43 GAHLPPLE 50
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 AHFPPFDTV 10
A PP DTV
Sbjct: 424 AQCPPGDTV 432
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 AHFPPFDTV 10
A PP DTV
Sbjct: 423 AQCPPGDTV 431
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 3 HFPPF 7
+FPPF
Sbjct: 105 NFPPF 109
>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12
Query: 4 FPPFDT 9
F PFDT
Sbjct: 24 FDPFDT 29
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 HFPPFDTV 10
HF PF+T
Sbjct: 1553 HFLPFNTT 1560
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 HFPPFDTV 10
FPPF V
Sbjct: 541 KFPPFSAV 548
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 AHFPPFDTV 10
A PP DTV
Sbjct: 425 AQCPPGDTV 433
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 AHFPPFDTV 10
A PP DTV
Sbjct: 425 AQCPPGDTV 433
19|SequenceR|100|91|AKETGNAHFP
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 TGNAHFP 10
TG H+P
Sbjct: 106 TGTVHYP 112
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 TGNAHFP 10
TG H+P
Sbjct: 106 TGTVHYP 112
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 5 GNAHFP 10
GNA+FP
Sbjct: 205 GNANFP 210
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 4 TGNAHFP 10
+G+AH P
Sbjct: 152 SGDAHIP 158
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 5 GNAHFP 10
GNA FP
Sbjct: 244 GNARFP 249
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 3 ETGNAHF 9
+TG +HF
Sbjct: 481 DTGKSHF 487
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 470 AKEIGNGCF 478
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 476 AKELGNGCF 484
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 475 AKELGNGCF 483
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 476 AKELGNGCF 484
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 473 AKEIGNGCF 481
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 473 AKEIGNGCF 481
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 476 AKELGNGCF 484
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 476 AKELGNGCF 484
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 476 AKELGNGCF 484
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 3 ETGNAHF 9
+TG +HF
Sbjct: 478 DTGKSHF 484
>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 473 AKEIGNGCF 481
>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 473 AKEIGNGCF 481
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 473 AKEIGNGCF 481
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 473 AKEIGNGCF 481
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 476 AKELGNGCF 484
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 468 AKELGNGCF 476
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 476 AKELGNGCF 484
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 476 AKELGNGCF 484
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 476 AKELGNGCF 484
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 465 AKELGNGCF 473
>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKEIGNGCF 482
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 473 AKEIGNGCF 481
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKELGNGCF 482
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 KETGNAHF 9
K+TGN F
Sbjct: 6 KKTGNPSF 13
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 465 AKELGNGCF 473
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 476 AKELGNGCF 484
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 465 AKELGNGCF 473
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 474 AKELGNGCF 482
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 TGNAHFP 10
TG AH P
Sbjct: 370 TGEAHNP 376
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 472 AKELGNGCF 480
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 AKETGNAHF 9
AKE GN F
Sbjct: 465 AKELGNGCF 473
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 AKETGNAH 8
A+ETG H
Sbjct: 691 ARETGGRH 698
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 AKETGNAH 8
A+ETG H
Sbjct: 691 ARETGGRH 698
20|SequenceR|105|96|LEVLKAKETG
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 2 EVLKAKET 9
EV+K KET
Sbjct: 198 EVMKFKET 205
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EVLKAKET 9
EV+K KET
Sbjct: 198 EVMKFKET 205
21|SequenceR|110|101|VVIRYLEVLK
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 VIRYLEVL 9
V RYLEV+
Sbjct: 1020 VARYLEVV 1027
22|SequenceR|115|106|STGLYVVIRY
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 2 TGLYVVIRY 10
T LYV RY
Sbjct: 372 TSLYVECRY 380
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 GLYVVI 8
GLY+VI
Sbjct: 678 GLYIVI 683
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 1 STGLYVVIRY 10
+TG Y I+Y
Sbjct: 425 TTGAYTDIKY 434
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 STGLYVVIRY 10
+TG Y I+Y
Sbjct: 425 TTGAYTDIKY 434
23|SequenceR|120|111|TINGLSTGLY
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 4 GLSTGLY 10
GL+TGLY
Sbjct: 648 GLTTGLY 654
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 3 NGLSTGLY 10
NG TG+Y
Sbjct: 762 NGFKTGIY 769
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 INGLSTGLY 10
+NGL GLY
Sbjct: 5382 MNGLVFGLY 5390
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 4 GLSTGLY 10
GLS GLY
Sbjct: 370 GLSYGLY 376
>sp|PG108_VAR67|ENVELOPE protein H3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 GLSTGLY 10
GLS+G Y
Sbjct: 208 GLSSGFY 214
>sp|PG108_VACCC|ENVELOPE protein H3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GLSTGLY 10
GLS+G Y
Sbjct: 207 GLSSGFY 213
>sp|PG108_MONPV|ENVELOPE protein OPG108|Monkeypox virus (MPXV)
Query: 4 GLSTGLY 10
GLS+G Y
Sbjct: 207 GLSSGFY 213
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 NGLSTGLY 10
NGL GLY
Sbjct: 5396 NGLVFGLY 5403
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 3 NGLSTGLY 10
NG++ GLY
Sbjct: 357 NGINDGLY 364
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 5 LSTGLY 10
LSTG+Y
Sbjct: 1435 LSTGIY 1440
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 5 LSTGLY 10
LSTG+Y
Sbjct: 1456 LSTGIY 1461
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 5 LSTGLY 10
LSTG+Y
Sbjct: 1456 LSTGIY 1461
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 LSTGLY 10
LSTG+Y
Sbjct: 1435 LSTGIY 1440
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 LSTGLY 10
LSTG+Y
Sbjct: 1435 LSTGIY 1440
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 5 LSTGLY 10
LSTG+Y
Sbjct: 1440 LSTGIY 1445
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 INGLSTGLY 10
+NG+ GLY
Sbjct: 5470 MNGMVFGLY 5478
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 INGLSTGLY 10
+NG+ GLY
Sbjct: 5420 MNGMVFGLY 5428
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 INGLSTGLY 10
+NG+ GLY
Sbjct: 5440 MNGMVFGLY 5448
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 5 LSTGLY 10
LSTG+Y
Sbjct: 1442 LSTGVY 1447
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 5 LSTGLY 10
LSTG+Y
Sbjct: 1442 LSTGVY 1447
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 5 LSTGLY 10
LSTG+Y
Sbjct: 1442 LSTGVY 1447
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 LSTGLY 10
LSTG+Y
Sbjct: 1435 LSTGVY 1440
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 5 LSTGLY 10
LSTG+Y
Sbjct: 1442 LSTGVY 1447
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 LSTGLY 10
LSTG+Y
Sbjct: 1442 LSTGVY 1447
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 2 INGLSTGLY 10
I+G STG Y
Sbjct: 153 ISGQSTGNY 161
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 INGLSTG 8
ING +TG
Sbjct: 2067 INGYTTG 2073
24|SequenceR|125|116|IKQDRTINGL
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 3 QDRTIN 8
QDR+IN
Sbjct: 780 QDRSIN 785
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 5 RTINGL 10
+TINGL
Sbjct: 698 KTINGL 703
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 5 RTINGL 10
+TINGL
Sbjct: 698 KTINGL 703
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 5 RTINGL 10
+TINGL
Sbjct: 698 KTINGL 703
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 RTINGL 10
+TINGL
Sbjct: 698 KTINGL 703
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 RTINGL 10
+TINGL
Sbjct: 698 KTINGL 703
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 RTINGL 10
+TINGL
Sbjct: 698 KTINGL 703
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 2 KQDRTING 9
K D+TI G
Sbjct: 390 KMDKTIKG 397
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 5 RTINGL 10
+TINGL
Sbjct: 353 KTINGL 358
25|SequenceR|130|121|ASPNLIKQDR
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 ASPNLIKQ 8
+SP +IKQ
Sbjct: 3659 SSPQIIKQ 3666
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 ASPNLIKQ 8
+SP +IKQ
Sbjct: 3659 SSPQIIKQ 3666
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 4 NLIKQDR 10
NLI QDR
Sbjct: 135 NLITQDR 141
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 2 SPNLIK 7
+PNLIK
Sbjct: 343 APNLIK 348
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 PNLIKQDR 10
P+L K+DR
Sbjct: 1535 PSLTKKDR 1542
26|SequenceR|135|126|SHLSLASPNL
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 SHLSLASPN 9
SHL+L PN
Sbjct: 82 SHLNLTMPN 90
>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30
Query: 1 SHLSLASPN 9
SHLS+A+P+
Sbjct: 362 SHLSIATPS 370
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 SHLSLASPN 9
SHL+L PN
Sbjct: 82 SHLNLTMPN 90
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 1 SHLSLASPNL 10
+HL++ +PN+
Sbjct: 400 AHLNVMNPNI 409
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 HLSLASPNL 10
+LSL PNL
Sbjct: 748 YLSLRCPNL 756
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 1 SHLSLASPNL 10
+HL++ +PN+
Sbjct: 400 AHLNVMNPNI 409
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 HLSLASPNL 10
HL SPN+
Sbjct: 1336 HLRSTSPNV 1344
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 2 HLSLASPN 9
HL L+ PN
Sbjct: 176 HLFLSMPN 183
27|SequenceR|140|131|TANLKSHLSL
>sp|US04_HCMVA|UNCHARACTERIZED protein US4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 NLKSHLS 9
N+KSH+S
Sbjct: 70 NVKSHVS 76
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 2 ANLKSHLSL 10
+N+K H++L
Sbjct: 951 SNIKDHINL 959
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 3 NLKSHLS 9
NLK HLS
Sbjct: 333 NLKLHLS 339
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 4 LKSHLSL 10
+K+HLSL
Sbjct: 251 IKNHLSL 257
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 LKSHLSL 10
+K+HLSL
Sbjct: 251 IKNHLSL 257
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 NLKSHLS 9
NLK HLS
Sbjct: 333 NLKLHLS 339
28|SequenceR|145|136|RLIDATANLK
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 IDATANLK 10
+DAT NLK
Sbjct: 733 MDATFNLK 740
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 3 IDATANLK 10
+DAT NLK
Sbjct: 733 MDATFNLK 740
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 3 IDATANLK 10
+DAT NLK
Sbjct: 733 MDATFNLK 740
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 IDATANLK 10
+DAT NLK
Sbjct: 733 MDATFNLK 740
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 RLIDATANLK 10
R+ID N+K
Sbjct: 1916 RVIDGRTNIK 1925
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 RLIDATANLK 10
R+ID N+K
Sbjct: 1916 RVIDGRTNIK 1925
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 RLIDATANLK 10
R+ID N+K
Sbjct: 1916 RVIDGRTNIK 1925
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 RLIDATANLK 10
R+ID N+K
Sbjct: 1917 RVIDGRTNIK 1926
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 RLIDATANLK 10
R+ID N+K
Sbjct: 1916 RVIDGRTNIK 1925
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 RLIDATANLK 10
R+ID N+K
Sbjct: 1916 RVIDGRTNIK 1925
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 RLIDATANLK 10
R+ID N+K
Sbjct: 1916 RVIDGRTNIK 1925
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 RLIDATANLK 10
R+ID N+K
Sbjct: 1916 RVIDGRTNIK 1925
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 RLIDATANLK 10
R+ID N+K
Sbjct: 1918 RVIDGRTNIK 1927
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 RLIDATANLK 10
R+ID N+K
Sbjct: 1918 RVIDGRTNIK 1927
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 2 LIDATAN 8
L+DAT N
Sbjct: 315 LVDATTN 321
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 RLIDATANL 9
RL+ AT NL
Sbjct: 1219 RLLIATTNL 1227
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 ATANLK 10
ATANLK
Sbjct: 1072 ATANLK 1077
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 5 ATANLK 10
ATANLK
Sbjct: 1072 ATANLK 1077
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 IDATANLK 10
+DAT N+K
Sbjct: 726 MDATFNIK 733
29|SequenceR|150|141|NSLLGRLIDA
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 NSLLGRL 7
NSL+GRL
Sbjct: 656 NSLIGRL 662
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 4 LGRLID 9
LGRL+D
Sbjct: 94 LGRLVD 99
>sp|VE8E2_HPV08|PROTEIN E8^E2C|Human papillomavirus type 8
Query: 4 LGRLID 9
LGRL+D
Sbjct: 214 LGRLLD 219
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 4 LGRLID 9
LGRL+D
Sbjct: 410 LGRLLD 415
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 4 LGRLID 9
LGRL+D
Sbjct: 404 LGRLLD 409
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 4 LGRLID 9
LGRL+D
Sbjct: 390 LGRLLD 395
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 4 LGRLID 9
LGRL+D
Sbjct: 405 LGRLLD 410
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 NSLLGR 6
NSL+GR
Sbjct: 575 NSLMGR 580
30|SequenceR|155|146|LRCLVNSLLG
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 RCLVNS 7
RCL+NS
Sbjct: 267 RCLINS 272
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 RCLVNS 7
RCL+NS
Sbjct: 266 RCLINS 271
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RCLVNSLLG 10
RCLVN+ L
Sbjct: 412 RCLVNAPLA 420
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 RCLVNSLLG 10
RCLVN+ L
Sbjct: 412 RCLVNAPLA 420
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 RCLVNSLLG 10
RCLVN+ L
Sbjct: 412 RCLVNAPLA 420
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LRCLVNSLLG 10
LRC NS+ G
Sbjct: 245 LRCFENSVEG 254
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LRCLVNSLLG 10
LRC NS+ G
Sbjct: 245 LRCFENSVEG 254
>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain AD169)
Query: 1 LRCLVNSLL 9
L CL+N +L
Sbjct: 297 LHCLINPIL 305
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 RCLVN 6
RCLVN
Sbjct: 608 RCLVN 612
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 3 CLVNSLL 9
CL+NS++
Sbjct: 1155 CLINSMV 1161
>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)
Query: 1 LRCLVNSLL 9
L CL+N +L
Sbjct: 297 LHCLINPIL 305
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 LRCLVNSLL 9
LRCL SLL
Sbjct: 204 LRCLRISLL 212
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 LRCLVNSLL 9
LRCL SLL
Sbjct: 204 LRCLRISLL 212
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 CLVNSLLG 10
C+ NS+L
Sbjct: 503 CMANSMLA 510
31|SequenceR|160|151|HYKSCLRCLV
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 HYKSCLRC 8
HY SC+ C
Sbjct: 1776 HYSSCVEC 1783
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 HYKSCLRC 8
HY SC+ C
Sbjct: 1776 HYSSCVEC 1783
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 HYKSCLRC 8
HYK +RC
Sbjct: 155 HYKELMRC 162
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 HYKSCLRC 8
HYK +RC
Sbjct: 154 HYKELMRC 161
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 1 HYKSCLRC 8
HY S LRC
Sbjct: 155 HYTSLLRC 162
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 YKSCLRCLV 10
YK+CLR ++
Sbjct: 1985 YKTCLRSIM 1993
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 YKSCLRCLV 10
YK+CLR ++
Sbjct: 1985 YKTCLRSIM 1993
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 2 YKSCLRCLV 10
YK C CLV
Sbjct: 115 YKGCEGCLV 123
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 3 KSCLRCL 9
+ CLRCL
Sbjct: 176 RRCLRCL 182
>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)
Query: 1 HYKSC 5
HYKSC
Sbjct: 398 HYKSC 402
>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HYKSC 5
HYKSC
Sbjct: 398 HYKSC 402
>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HYKSC 5
HYKSC
Sbjct: 394 HYKSC 398
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 1 HYKSCLRC 8
YKSC C
Sbjct: 188 QYKSCKTC 195
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 4 SCLRC 8
+CLRC
Sbjct: 1102 TCLRC 1106
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 SCLRC 8
+CLRC
Sbjct: 1102 TCLRC 1106
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 4 SCLRC 8
+CLRC
Sbjct: 1102 TCLRC 1106
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 SCLRC 8
+CLRC
Sbjct: 1102 TCLRC 1106
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 SCLRC 8
+CLRC
Sbjct: 1094 TCLRC 1098
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 4 SCLRC 8
+CLRC
Sbjct: 1102 TCLRC 1106
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 4 SCLRC 8
+CLRC
Sbjct: 1102 TCLRC 1106
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 4 SCLRC 8
+CLRC
Sbjct: 1102 TCLRC 1106
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 4 SCLRC 8
+CLRC
Sbjct: 1102 TCLRC 1106
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 2 YKSCLRCL 9
YKS L C+
Sbjct: 53 YKSVLSCM 60
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 1 HYKSCLRCL 9
HY+ CL L
Sbjct: 182 HYERCLLTL 190
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 3 KSCLRCL 9
+ C+RCL
Sbjct: 176 RRCVRCL 182
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 2 YKSCLRCL 9
YK+CL L
Sbjct: 158 YKNCLNSL 165
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 5 CLRC 8
CLRC
Sbjct: 1075 CLRC 1078
>sp|VPX_HV2D2|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 HYKSCLRCL 9
HY RCL
Sbjct: 81 HYTKGCRCL 89
>sp|NS7A_SARS|ORF7A protein|Severe acute respiratory syndrome coronavirus
Query: 1 HYKSCLR 7
HY+ C+R
Sbjct: 19 HYQECVR 25
>sp|PAX_I34A1|PROTEIN PA-X|Influenza A virus (strain A/Puerto
Query: 4 SCLRC 8
SCL+C
Sbjct: 245 SCLKC 249
>sp|PAX_I06A0|PROTEIN PA-X|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 4 SCLRC 8
SCL+C
Sbjct: 245 SCLKC 249
>sp|PAX_I000X|PROTEIN PA-X|Influenza A virus (strain A/X-31
Query: 4 SCLRC 8
SCL+C
Sbjct: 245 SCLKC 249
>sp|VE6_HPV03|PROTEIN E6|Human papillomavirus 3
Query: 2 YKSCLRCLV 10
Y +C RCL+
Sbjct: 63 YGACARCLL 71
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 2 YKSCLR 7
Y+SCL+
Sbjct: 14 YRSCLQ 19
>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)
Query: 3 KSCLRCL 9
+ C RC+
Sbjct: 189 RKCFRCI 195
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 KSCLRCLV 10
K C++C +
Sbjct: 672 KDCVKCFI 679
>sp|NS1_INCAA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Ann
Query: 3 KSCLRCL 9
+ C RC+
Sbjct: 189 RKCFRCI 195
>sp|VE6_HPV29|PROTEIN E6|Human papillomavirus 29
Query: 2 YKSCLRCLV 10
Y +C RCL+
Sbjct: 59 YGACARCLL 67
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 4 SCLRCL 9
+CL+CL
Sbjct: 318 NCLKCL 323
>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)
Query: 3 KSCLRCL 9
+ C RC+
Sbjct: 189 RKCFRCI 195
>sp|NS1_INCCA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/California/1978)
Query: 3 KSCLRCL 9
+ C RC+
Sbjct: 189 RKCFRCI 195
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 2 YKSCLR 7
YK+CL+
Sbjct: 15 YKTCLQ 20
>sp|VE6_HPV28|PROTEIN E6|Human papillomavirus 28
Query: 2 YKSCLRCLV 10
Y +C RCL+
Sbjct: 57 YGACARCLL 65
>sp|NS1_INCTA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Taylor/1233/1947)
Query: 3 KSCLRCL 9
+ C RC+
Sbjct: 184 RKCFRCI 190
>sp|NS1_INCJH|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 KSCLRCL 9
+ C RC+
Sbjct: 184 RKCFRCI 190
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 CLRCL 9
CL+CL
Sbjct: 135 CLQCL 139
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 CLRCL 9
CL+CL
Sbjct: 135 CLQCL 139
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 CLRCL 9
CL+CL
Sbjct: 135 CLQCL 139
>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)
Query: 3 KSCLRCL 9
+ C RC+
Sbjct: 184 RKCFRCI 190
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 KSCLRCLV 10
K C++C +
Sbjct: 672 KDCVKCFI 679
>sp|NS1_INCGL|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Great
Query: 3 KSCLRCL 9
+ C RC+
Sbjct: 184 RKCFRCI 190
>sp|VE6_HPV94|PROTEIN E6|Human papillomavirus type 94
Query: 2 YKSCLRCLV 10
Y +C RCL+
Sbjct: 59 YGACARCLL 67
>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)
Query: 3 KSCLRCL 9
+ C RC+
Sbjct: 184 RKCFRCI 190
>sp|VE6_HPV10|PROTEIN E6|Human papillomavirus type 10
Query: 2 YKSCLRCLV 10
Y +C RCL+
Sbjct: 59 YGACARCLL 67
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 3 KSCLRCLV 10
+ C +CLV
Sbjct: 844 RQCKQCLV 851
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 3 KSCLRCLV 10
+ C +CLV
Sbjct: 844 RQCKQCLV 851
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 HYKSCLRC 8
HY+ L C
Sbjct: 1662 HYRDFLSC 1669
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 HYKSCLRC 8
HY+ L C
Sbjct: 1662 HYRDFLSC 1669
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 HYKSCLRC 8
HY+ L C
Sbjct: 1662 HYRDFLSC 1669
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 HYKSCLRC 8
HY+ L C
Sbjct: 1662 HYRDFLSC 1669
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 HYKSCLRC 8
HY+ L C
Sbjct: 1662 HYRDFLSC 1669
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 4 SCLRCL 9
+CL+CL
Sbjct: 305 NCLKCL 310
>sp|VPX_HV2UC|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 HYKSCLRCL 9
HY RCL
Sbjct: 81 HYTKGCRCL 89
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 CLRCLV 10
C+RC V
Sbjct: 353 CIRCAV 358
>sp|VE7_HPV60|PROTEIN E7|Human papillomavirus type 60
Query: 2 YKSCLRC 8
+ +CLRC
Sbjct: 80 FLTCLRC 86
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 CLRCLV 10
C+RC V
Sbjct: 353 CIRCAV 358
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 CLRCLV 10
C+RC V
Sbjct: 352 CIRCAV 357
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 CLRCLV 10
C+RC V
Sbjct: 353 CIRCAV 358
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 CLRCLV 10
C+RC V
Sbjct: 353 CIRCAV 358
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 5 CLRCL 9
C+RCL
Sbjct: 51 CMRCL 55
>sp|NEF_HV1SC|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 HYKSCL 6
+YK CL
Sbjct: 202 YYKDCL 207
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 4 SCLRCL 9
+CL+CL
Sbjct: 305 NCLKCL 310
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 CLRCL 9
C+RCL
Sbjct: 49 CMRCL 53
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 HYKSCLRCL 9
HY CL L
Sbjct: 1813 HYVGCLEPL 1821
>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)
Query: 3 KSCLRC 8
K+C++C
Sbjct: 187 KTCMKC 192
32|SequenceR|165|156|DVHGVHYKSC
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHYKS 9
VHGV+Y S
Sbjct: 898 VHGVYYDS 905
>sp|NEF_HV1SC|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DVHGVHYKSC 10
D+H +YK C
Sbjct: 197 DLHPEYYKDC 206
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHYK 8
VHGV+Y+
Sbjct: 902 VHGVYYQ 908
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHYK 8
VHGV+Y+
Sbjct: 900 VHGVYYQ 906
>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18
Query: 2 VHGVHY 7
+HG HY
Sbjct: 430 IHGTHY 435
>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)
Query: 6 HYKSC 10
HYKSC
Sbjct: 394 HYKSC 398
>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)
Query: 6 HYKSC 10
HYKSC
Sbjct: 398 HYKSC 402
>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 HYKSC 10
HYKSC
Sbjct: 398 HYKSC 402
>sp|NEF_HV1OY|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DVHGVHYKSC 10
+VH +YK C
Sbjct: 202 EVHPEYYKDC 211
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 902 VHGVYY 907
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 901 VHGVYY 906
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 895 VHGVYY 900
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 894 VHGVYY 899
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 899 VHGVYY 904
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 898 VHGVYY 903
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 902 VHGVYY 907
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 900 VHGVYY 905
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 898 VHGVYY 903
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 901 VHGVYY 906
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 896 VHGVYY 901
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 907 VHGVYY 912
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 906 VHGVYY 911
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 900 VHGVYY 905
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 901 VHGVYY 906
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 905 VHGVYY 910
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 901 VHGVYY 906
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 901 VHGVYY 906
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 913 VHGVYY 918
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 901 VHGVYY 906
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 913 VHGVYY 918
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 913 VHGVYY 918
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 896 VHGVYY 901
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 896 VHGVYY 901
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
VHGV+Y
Sbjct: 897 VHGVYY 902
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 2 VHGVHYKSC 10
+HGV +++C
Sbjct: 240 LHGVFFQNC 248
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 2 VHGVHYKSC 10
+HGV +++C
Sbjct: 244 LHGVFFQNC 252
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 6 HYKSC 10
HYK+C
Sbjct: 1361 HYKTC 1365
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 VHGVHYKSC 10
+H V+ +SC
Sbjct: 409 IHAVNQRSC 417
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 VHGVHYKSC 10
+H V+ +SC
Sbjct: 408 IHAVNQRSC 416
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 VHGVHYKSC 10
+H V+ +SC
Sbjct: 408 IHAVNQRSC 416
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
+HGV+Y
Sbjct: 901 IHGVYY 906
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 2 VHGVHYKSC 10
+HGV K+C
Sbjct: 450 LHGVPKKNC 458
>sp|NEF_HV1BN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DVHGVHYKSC 10
++H +YK+C
Sbjct: 209 ELHPEYYKNC 218
>sp|ORF5_MERS1|NON-STRUCTURAL protein ORF5|Middle East respiratory syndrome-related coronavirus
Query: 2 VHGVHYKS 9
V+GVHY +
Sbjct: 86 VNGVHYPT 93
>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DVHGVHYKSC 10
++H +YK+C
Sbjct: 199 ELHPEYYKNC 208
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 2 VHGVHYKSC 10
+HG KSC
Sbjct: 424 IHGKPKKSC 432
>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DVHGVHYKSC 10
++H +YK C
Sbjct: 198 ELHPEYYKDC 207
>sp|NEF_HV1S3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DVHGVHYKSC 10
++H +YK C
Sbjct: 196 ELHPEYYKDC 205
>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DVHGVHYKSC 10
++H +YK C
Sbjct: 198 ELHPEYYKDC 207
>sp|NEF_HV1A2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DVHGVHYKSC 10
++H +YK C
Sbjct: 201 ELHPEYYKDC 210
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DVHGVHYKSC 10
++H +YK C
Sbjct: 198 ELHPEYYKDC 207
>sp|NEF_HV192|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DVHGVHYKSC 10
++H +YK C
Sbjct: 197 ELHPEYYKDC 206
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
+HGV+Y
Sbjct: 911 LHGVYY 916
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VHGVHY 7
+HGV+Y
Sbjct: 911 LHGVYY 916
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 6 HYKSC 10
HY SC
Sbjct: 562 HYTSC 566
>sp|NEF_HV197|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DVHGVHYKSC 10
++H +YK C
Sbjct: 197 EMHPEYYKDC 206
>sp|NEF_HV1S1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DVHGVHYKSC 10
++H +YK C
Sbjct: 199 ELHPEYYKDC 208
>sp|NEF_HV1JR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DVHGVHYKSC 10
++H +YK C
Sbjct: 207 ELHPEYYKDC 216
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 HGVHYKS 9
HG Y+S
Sbjct: 28 HGTRYRS 34
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 HGVHYKS 9
HG Y+S
Sbjct: 28 HGTRYRS 34
>sp|NEF_HV196|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DVHGVHYKSC 10
++H +YK C
Sbjct: 206 ELHPDYYKDC 215
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 4 GVHYKSC 10
GV+ KSC
Sbjct: 221 GVNRKSC 227
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 4 GVHYKSC 10
GV+ KSC
Sbjct: 221 GVNRKSC 227
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 4 GVHYKSC 10
GV+ KSC
Sbjct: 221 GVNRKSC 227
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 4 GVHYKSC 10
GV+ KSC
Sbjct: 221 GVNRKSC 227
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VHGVHYKSC 10
++ VH+K C
Sbjct: 168 LNAVHHKLC 176
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 2 VHGVHYKSC 10
+HG+ K+C
Sbjct: 463 LHGIPKKNC 471
33|SequenceR|170|161|PGYTVDVHGV
>sp|ICP22_VZVO|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Oka
Query: 1 PGYTVDVHG 9
PG +VDV+G
Sbjct: 17 PGASVDVNG 25
>sp|ICP22_VZVD|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 PGYTVDVHG 9
PG +VDV+G
Sbjct: 17 PGASVDVNG 25
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 5 VDVHGV 10
VDVHGV
Sbjct: 153 VDVHGV 158
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 4 TVDVHG 9
TVDVHG
Sbjct: 170 TVDVHG 175
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 4 TVDVHG 9
TVDVHG
Sbjct: 170 TVDVHG 175
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 PGYTVDVHGV 10
PG++ HGV
Sbjct: 661 PGWSDTAHGV 670
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 PGYTVDVHG 9
PG+T HG
Sbjct: 660 PGWTDTAHG 668
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 PGYTVDVHGV 10
PG T+D+ G+
Sbjct: 1938 PGNTLDLSGL 1947
>sp|UL78_HCMVM|PROTEIN UL78|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PGYTVDV 7
PG T+DV
Sbjct: 400 PGTTIDV 406
>sp|UL78_HCMVA|UNCHARACTERIZED protein UL78|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PGYTVDV 7
PG T+DV
Sbjct: 400 PGTTIDV 406
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 PGYTVDVHGV 10
PG V V+GV
Sbjct: 1557 PGREVQVNGV 1566
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PGYTVDVH 8
PGY +H
Sbjct: 707 PGYIQQIH 714
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PGYTVDVH 8
PGY +H
Sbjct: 715 PGYIQQIH 722
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PGYTVDVH 8
PGY +H
Sbjct: 706 PGYIQQIH 713
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PGYTVDVH 8
PGY +H
Sbjct: 707 PGYIQQIH 714
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PGYTVDVH 8
PGY +H
Sbjct: 716 PGYIQQIH 723
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 YTVDVHG 9
YT +HG
Sbjct: 1423 YTASIHG 1429
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PGYTVDVHGV 10
PG T +HG+
Sbjct: 50 PGETWTLHGM 59
>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PGYTVDVHGV 10
PG T +HG+
Sbjct: 50 PGETWTLHGM 59
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 YTVDVH 8
Y+VD+H
Sbjct: 14 YSVDLH 19
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 3 YTVDVH 8
Y+VD+H
Sbjct: 14 YSVDLH 19
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 YTVDVH 8
Y+VD+H
Sbjct: 14 YSVDLH 19
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 YTVDVH 8
Y+VD+H
Sbjct: 14 YSVDLH 19
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 YTVDVH 8
Y+VD+H
Sbjct: 14 YSVDLH 19
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 YTVDVH 8
Y+VD+H
Sbjct: 14 YSVDLH 19
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 YTVDVH 8
Y+VD+H
Sbjct: 14 YSVDLH 19
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 YTVDVH 8
Y+VD+H
Sbjct: 14 YSVDLH 19
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 YTVDVH 8
Y+VD+H
Sbjct: 14 YSVDLH 19
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 YTVDVH 8
Y+VD+H
Sbjct: 14 YSVDLH 19
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 YTVDVH 8
Y+VD+H
Sbjct: 14 YSVDLH 19
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PGYTVDVH 8
PGY +H
Sbjct: 706 PGYLQQIH 713
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PGYTVDVH 8
PGY +H
Sbjct: 705 PGYLQQIH 712
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PGYTVDVH 8
PGY +H
Sbjct: 714 PGYLQQIH 721
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 4 TVDVHGV 10
T+D+HG+
Sbjct: 341 TLDLHGL 347
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 4 TVDVHGV 10
T+D+HG+
Sbjct: 522 TLDLHGL 528
>sp|VE2_HPV31|REGULATORY protein E2|Human papillomavirus 31
Query: 2 GYTVDVH 8
GYTV+V
Sbjct: 114 GYTVEVQ 120
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 TVDVHGV 10
++DVHG+
Sbjct: 663 SLDVHGL 669
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 PGYTVDVH 8
PGY VH
Sbjct: 367 PGYYETVH 374
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 TVDVHGV 10
++DVHG+
Sbjct: 663 SLDVHGL 669
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 PGYTVDVHGV 10
PG V V+G+
Sbjct: 1557 PGREVQVNGI 1566
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 5 VDVHG 9
VDVHG
Sbjct: 173 VDVHG 177
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 GYTVD 6
GYT+D
Sbjct: 37 GYTID 41
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 GYTVD 6
GYT+D
Sbjct: 37 GYTID 41
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 GYTVD 6
GYT+D
Sbjct: 37 GYTID 41
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 GYTVD 6
GYT+D
Sbjct: 768 GYTID 772
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 2 GYTVDVH 8
GYTV+V
Sbjct: 114 GYTVEVQ 120
>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain
Query: 2 GYTVDVHGV 10
G+T VH V
Sbjct: 31 GFTTYVHSV 39
>sp|YVD2_VACCC|UNCHARACTERIZED 8.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 YTVDVHG 9
+ VD+HG
Sbjct: 59 WMVDIHG 65
34|SequenceR|175|166|KGSTDPGYTV
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 4 TDPGYTV 10
TDPGY V
Sbjct: 313 TDPGYPV 319
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 4 TDPGYTV 10
TDPGY V
Sbjct: 315 TDPGYPV 321
>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 2 GSTDPGYT 9
G DPGYT
Sbjct: 73 GIIDPGYT 80
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 4 TDPGYTV 10
+DPGY V
Sbjct: 80 SDPGYKV 86
>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 2 GSTDPGYT 9
G DPGYT
Sbjct: 73 GIIDPGYT 80
>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 2 GSTDPGYT 9
G DPGYT
Sbjct: 73 GIIDPGYT 80
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 6 PGYTV 10
PGYTV
Sbjct: 841 PGYTV 845
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 PGYTV 10
PGYTV
Sbjct: 841 PGYTV 845
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 5 DPGYTV 10
DP YT+
Sbjct: 455 DPAYTI 460
>sp|YVAD_VACCC|UNCHARACTERIZED 9.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KGSTDPGYTV 10
K S PGYT+
Sbjct: 67 KKSHAPGYTL 76
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 3 STDPGYTV 10
+ DPGY +
Sbjct: 1148 AEDPGYAI 1155
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 3 STDPGYTV 10
+ DPGY +
Sbjct: 1148 AEDPGYAI 1155
>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 5 DPGYTV 10
DPGY +
Sbjct: 72 DPGYYI 77
>sp|PHOSP_PI2HT|PHOSPHOPROTEIN parainfluenza 2 virus (strain
Query: 1 KGSTDPGYT 9
KGS PG T
Sbjct: 39 KGSIPPGVT 47
>sp|PHOSP_PI2H|PHOSPHOPROTEIN parainfluenza 2 virus (HPIV-2)
Query: 1 KGSTDPGYT 9
KGS PG T
Sbjct: 39 KGSIPPGVT 47
>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 5 DPGYTV 10
DPGY +
Sbjct: 72 DPGYYI 77
>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus
Query: 5 DPGYTV 10
DPGY +
Sbjct: 72 DPGYYI 77
>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate
Query: 5 DPGYTV 10
DPGY +
Sbjct: 72 DPGYYI 77
>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)
Query: 5 DPGYTV 10
DPGY +
Sbjct: 72 DPGYYI 77
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 GSTDPGY 8
G+T PGY
Sbjct: 551 GTTRPGY 557
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 KGSTDPG 7
KG T PG
Sbjct: 1518 KGDTSPG 1524
>sp|V_PI2H|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (HPIV-2)
Query: 1 KGSTDPGYTV 10
KGS PG T
Sbjct: 39 KGSIPPGVTA 48
>sp|V_PI2HT|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (strain
Query: 1 KGSTDPGYTV 10
KGS PG T
Sbjct: 39 KGSIPPGVTA 48
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 GSTDPGYTV 10
G+T+ GY++
Sbjct: 138 GATEHGYSI 146
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 GSTDPGYTV 10
G+T+ GY++
Sbjct: 138 GATEHGYSI 146
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 5 DPGYTV 10
D GYTV
Sbjct: 555 DEGYTV 560
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 KGSTDPG 7
KG T PG
Sbjct: 1518 KGDTTPG 1524
35|SequenceR|180|171|KQFVDKGSTD
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 QFVDKGSTD 10
QF D GS+D
Sbjct: 517 QFFDCGSSD 525
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 2 QFVDKGSTD 10
QF D GS+D
Sbjct: 517 QFFDCGSSD 525
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 2 QFVDKGSTD 10
QF D GS+D
Sbjct: 517 QFFDCGSSD 525
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 QFVDKGSTD 10
QF D GS+D
Sbjct: 517 QFFDCGSSD 525
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 KQFVDKG 7
K FVD+G
Sbjct: 381 KDFVDRG 387
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 KQFVDKGSTD 10
K F DK S+D
Sbjct: 425 KSFKDKTSSD 434
>sp|PG039_MONPV|INTERFERON antagonist OPG039|Monkeypox virus (MPXV)
Query: 2 QFVDKGST 9
QF DKG+T
Sbjct: 89 QFDDKGNT 96
>sp|PG039_VACCC|INTERFERON antagonist OPG040|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 QFVDKGST 9
QF DKG+T
Sbjct: 89 QFDDKGNT 96
>sp|PG055_VARV|PROTEIN OPG055|Variola virus
Query: 1 KQFVDKGSTD 10
K VDK TD
Sbjct: 310 KSLVDKEDTD 319
>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 KQFVDKGSTD 10
K VDK TD
Sbjct: 310 KSLVDKEDTD 319
36|SequenceR|185|176|CGLKKKQFVD
>sp|VE8E2_HPV18|PROTEIN E8^E2C|Human papillomavirus type 18
Query: 1 CGLKKKQ 7
CGL +KQ
Sbjct: 58 CGLAEKQ 64
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 1 CGLKKKQ 7
CGL +KQ
Sbjct: 252 CGLAEKQ 258
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 GLKKKQFV 9
GL+ QFV
Sbjct: 957 GLRNSQFV 964
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LKKKQFVD 10
L KK FVD
Sbjct: 514 LNKKLFVD 521
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLK+KQ V
Sbjct: 685 GLKQKQSV 692
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 GLKKKQFVD 10
GL+ K F+D
Sbjct: 938 GLRTKVFLD 946
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 GLKKKQFVD 10
GL+ K F+D
Sbjct: 938 GLRTKVFLD 946
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 GLKKKQFVD 10
GL+ K F+D
Sbjct: 938 GLRTKVFLD 946
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 GLKKKQFVD 10
GL+ K F+D
Sbjct: 938 GLRTKVFLD 946
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 GLKKKQFVD 10
GL+ K F+D
Sbjct: 938 GLRTKVFLD 946
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 GLKKKQFVD 10
GL+ K F+D
Sbjct: 938 GLRTKVFLD 946
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 GLKKKQFVD 10
GL+ K F+D
Sbjct: 938 GLRTKVFLD 946
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 4 KKKQFVD 10
K+K FVD
Sbjct: 1829 KQKSFVD 1835
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 GLKKKQFVD 10
GL+ K F+D
Sbjct: 938 GLRTKVFMD 946
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGLKKKQFVD 10
C + +KQ+ D
Sbjct: 331 CNISEKQWYD 340
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 687 GLKKKKSV 694
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 684 GLKKKKSV 691
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 698 GLKKKKSV 705
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 686 GLKKKKSV 693
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 698 GLKKKKSV 705
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 698 GLKKKKSV 705
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 686 GLKKKKSV 693
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 690 GLKKKKSV 697
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 690 GLKKKKSV 697
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 688 GLKKKKSV 695
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 687 GLKKKKSV 694
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 683 GLKKKKSV 690
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 686 GLKKKKSV 693
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 681 GLKKKKSV 688
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 679 GLKKKKSV 686
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 685 GLKKKKSV 692
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 691 GLKKKKSV 698
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 686 GLKKKRSV 693
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 681 GLKKKKSV 688
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 686 GLKKKKSV 693
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 683 GLKKKKSV 690
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 681 GLKKKKSV 688
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 692 GLKKKKSV 699
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 686 GLKKKKSV 693
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 681 GLKKKKSV 688
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 680 GLKKKKSV 687
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 682 GLKKKKSV 689
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 683 GLKKKKSV 690
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 687 GLKKKKSV 694
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GLKKKQFV 9
GLKKK+ V
Sbjct: 686 GLKKKKSV 693
37|SequenceR|190|181|KGLLQCGLKK
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 KGLLQCGLKK 10
KGL++ GLKK
Sbjct: 1142 KGLIRSGLKK 1151
Query: 1 KGLLQCGLK 9
K L+Q GLK
Sbjct: 2087 KLLMQAGLK 2095
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 KGLLQCGLKK 10
KGL++ GL+K
Sbjct: 1142 KGLIRSGLRK 1151
Query: 3 LLQCGLK 9
LLQ GLK
Sbjct: 2089 LLQAGLK 2095
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 KGLLQCGLK 9
K LLQ GLK
Sbjct: 465 KFLLQAGLK 473
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 1 KGLLQCGLK 9
K LLQ GLK
Sbjct: 466 KFLLQAGLK 474
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 KGLLQCGLK 9
K LLQ GLK
Sbjct: 467 KFLLQAGLK 475
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 1 KGLLQCGLK 9
K LLQ GLK
Sbjct: 492 KFLLQSGLK 500
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KGLLQCGLK 9
K +L+CGL+
Sbjct: 694 KTVLRCGLE 702
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KGLLQCGLK 9
K +L+CGL+
Sbjct: 693 KTVLRCGLE 701
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 GLLQCGLK 9
GLLQ G K
Sbjct: 1739 GLLQAGTK 1746
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 KGLLQC 6
KGLL C
Sbjct: 417 KGLLDC 422
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 KGLLQC 6
KGLL C
Sbjct: 417 KGLLDC 422
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 2 GLLQCGLK 9
G QCG+K
Sbjct: 1081 GAPQCGIK 1088
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 2 GLLQCGLK 9
G QCG+K
Sbjct: 1080 GAPQCGIK 1087
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 2 GLLQCGLK 9
G QCG+K
Sbjct: 1081 GAPQCGIK 1088
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 1 KGLLQCGLK 9
K LLQ GL+
Sbjct: 461 KFLLQAGLR 469
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 1 KGLLQCGLK 9
K LLQ GL+
Sbjct: 466 KFLLQAGLR 474
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 1 KGLLQCGLK 9
K LLQ GL+
Sbjct: 466 KFLLQAGLR 474
>sp|Z_LASSJ|RING finger protein Z|Lassa virus (strain Mouse/Sierra
Query: 1 KGLLQC 6
KGL++C
Sbjct: 39 KGLVEC 44
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 KGLLQC 6
KGL++C
Sbjct: 451 KGLIRC 456
38|SequenceR|195|186|IIQKYKGLLQ
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 3 QKYKGLLQ 10
+KYK LLQ
Sbjct: 546 RKYKSLLQ 553
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 2 IQKYKGLL 9
I++YKGL+
Sbjct: 194 IKRYKGLI 201
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 2 IQKYKGLL 9
I++YKGL+
Sbjct: 194 IKRYKGLI 201
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 2 IQKYKGLL 9
+++YKGLL
Sbjct: 194 MKRYKGLL 201
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 2 IQKYKGLL 9
+++YKGLL
Sbjct: 194 MKRYKGLL 201
>sp|NSS_SFSV|NON-STRUCTURAL protein NS-S|Sandfly fever sicilian virus (SFS)
Query: 1 IIQKYKGLLQ 10
I+Q +K +LQ
Sbjct: 169 IVQAHKKILQ 178
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 IQKYKGL 8
+Q YKG+
Sbjct: 940 VQSYKGI 946
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 IIQKYKGL 8
I +KYKG+
Sbjct: 1402 IQRKYKGI 1409
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 IIQKYKGL 8
I +KYKG+
Sbjct: 1378 IQRKYKGI 1385
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 IIQKYKGL 8
I +KYKG+
Sbjct: 1402 IQRKYKGI 1409
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 IIQKYKGL 8
I +KYKG+
Sbjct: 1378 IQRKYKGI 1385
39|SequenceR|202|191|FAQALVAIIQKY
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 6 VAIIQKY 12
VAII+KY
Sbjct: 22 VAIIKKY 28
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 FAQALVAIIQKY 12
F Q L + +Q+Y
Sbjct: 2 FGQQLASDVQQY 13
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 1 FAQALVAIIQKY 12
F Q L + +Q+Y
Sbjct: 2 FGQQLASDVQQY 13
THE END