1|SequenceR|10|1|PPALGPGRAM
>sp|TRM3_EHV2|TRIPARTITE terminase subunit 3|Equine herpesvirus 2 (strain 86/87)
Query: 1 PPALGPGR 8
PP LG GR
Sbjct: 79 PPVLGTGR 86
>sp|RDRP_I83A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PALGPGRAM 10
PA GP R+M
Sbjct: 647 PAHGPARSM 655
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PALGPGRAM 10
PA GP R+M
Sbjct: 647 PAHGPARSM 655
>sp|VE4_HPV5B|PROTEIN E4|Human papillomavirus type 5b
Query: 2 PALGPGRA 9
P LGPGRA
Sbjct: 82 PGLGPGRA 89
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 LGPGRA 9
LGPGRA
Sbjct: 302 LGPGRA 307
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 LGPGRAM 10
+GPGRA+
Sbjct: 305 IGPGRAL 311
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 3 ALGPGRAM 10
A+GPGR +
Sbjct: 303 AIGPGRTL 310
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 ALGPGRA 9
++GPGRA
Sbjct: 309 SIGPGRA 315
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 ALGPGRA 9
++GPGRA
Sbjct: 305 SIGPGRA 311
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 ALGPGRA 9
++GPGRA
Sbjct: 313 SIGPGRA 319
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 ALGPGRA 9
++GPGRA
Sbjct: 310 SIGPGRA 316
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PPALGP 6
PPA+GP
Sbjct: 215 PPAMGP 220
>sp|CAP6_ADEB3|PRE-PROTEIN VI|Bovine adenovirus B serotype 3
Query: 3 ALGPGRAM 10
ALGPG AM
Sbjct: 55 ALGPGTAM 62
>sp|GM_BHV1C|ENVELOPE glycoprotein M|Bovine herpesvirus 1.1 (strain Cooper)
Query: 4 LGPGRAM 10
LGPGRA+
Sbjct: 207 LGPGRAV 213
2|SequenceR|15|6|PLRLPPPALG
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PLRLPPPAL 9
PLRLPP L
Sbjct: 788 PLRLPPAYL 796
>sp|SPIKE_BCHK5|SPIKE glycoprotein|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 3 RLPPPAL 9
RLPPP L
Sbjct: 1218 RLPPPLL 1224
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 4 LPPPALG 10
LPPP LG
Sbjct: 1218 LPPPLLG 1224
>sp|VF199_ASFWA|INNER membrane protein E199L|African swine fever virus (isolate
Query: 3 RLPPPAL 9
+LPPP+L
Sbjct: 186 KLPPPSL 192
>sp|VF199_ASFP4|INNER membrane protein E199L|African swine fever virus (isolate
Query: 3 RLPPPAL 9
+LPPP+L
Sbjct: 185 KLPPPSL 191
>sp|VF199_ASFM2|INNER membrane protein E199L|African swine fever virus (isolate
Query: 3 RLPPPAL 9
+LPPP+L
Sbjct: 185 KLPPPSL 191
>sp|VF199_ASFK5|INNER membrane protein E199L|African swine fever virus (isolate
Query: 3 RLPPPAL 9
+LPPP+L
Sbjct: 185 KLPPPSL 191
>sp|VF199_ASFB7|INNER membrane protein E199L|African swine fever virus (strain
Query: 3 RLPPPAL 9
+LPPP+L
Sbjct: 185 KLPPPSL 191
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PLRLPPPALG 10
P R PPP G
Sbjct: 603 PARDPPPGAG 612
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PLRLPPPALG 10
P R PPP G
Sbjct: 603 PARDPPPGAG 612
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PLRLPPPALG 10
P R PPP G
Sbjct: 603 PARDPPPGAG 612
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 3 RLPPPA 8
RLPPP+
Sbjct: 19 RLPPPS 24
>sp|TEG5_BHV1C|TEGUMENT protein UL47|Bovine herpesvirus 1.1 (strain Cooper)
Query: 1 PLRLPPPALG 10
P RLP PA+G
Sbjct: 397 PRRLPRPAVG 406
3|SequenceR|20|11|VLLLLPLRLP
>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 3 LLLPLRLP 10
LL+PLR P
Sbjct: 729 LLMPLRAP 736
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 3 LLLPLRLP 10
LL+PLR P
Sbjct: 729 LLMPLRAP 736
4|SequenceR|25|16|TVAALVLLLL
***** No hits found ******
5|SequenceR|30|21|AATHGTVAAL
>sp|NS7B_BCHK9|NON-STRUCTURAL protein 7b|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 2 ATHGTVAAL 10
ATHG AAL
Sbjct: 104 ATHGMYAAL 112
6|SequenceR|35|26|TCNDQAATHG
>sp|DPOL_BPT5|DNA polymerase|Escherichia phage T5 (Enterobacteria phage
Query: 2 CNDQAATHG 10
C+DQ HG
Sbjct: 655 CHDQIKNHG 663
>sp|M35_MUHVK|PROTEIN M35|Murid herpesvirus 1 (strain K181)
Query: 1 TCNDQAATH 9
+C DQ AT+
Sbjct: 412 SCTDQEATY 420
>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)
Query: 1 TCNDQAATHG 10
T ND THG
Sbjct: 43 THNDHEETHG 52
>sp|CAPSD_GLVWB|MAJOR capsid protein|Giardia lamblia virus (isolate Wang)
Query: 1 TCNDQAATHG 10
T ND THG
Sbjct: 43 THNDHEETHG 52
>sp|DNB2_ADEG1|DNA-BINDING protein|Fowl adenovirus A serotype 1
Query: 2 CNDQAATHG 10
CN QAA+ G
Sbjct: 360 CNPQAASGG 368
7|SequenceR|40|31|KNTPCTCNDQ
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 NTPCTCNDQ 10
NTP TC D+
Sbjct: 1561 NTPLTCFDE 1569
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 5 CTCND 9
CTCND
Sbjct: 138 CTCND 142
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 5 CTCND 9
CTCND
Sbjct: 138 CTCND 142
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 CTCND 9
CTCND
Sbjct: 138 CTCND 142
>sp|DNLI_VACCW|DNA ligase|Vaccinia virus (strain Western Reserve)
Query: 5 CTCND 9
CTCND
Sbjct: 138 CTCND 142
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 TPCTC 7
TPCTC
Sbjct: 1121 TPCTC 1125
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 CTCND 9
CTCND
Sbjct: 138 CTCND 142
>sp|DPOL_ADEB2|DNA polymerase|Bovine adenovirus 2 (BAdV-2) (Mastadenovirus
Query: 1 KNTPCTC 7
KNT CTC
Sbjct: 900 KNTVCTC 906
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 TPCTC 7
TPCTC
Sbjct: 1119 TPCTC 1123
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 TPCTC 7
TPCTC
Sbjct: 1121 TPCTC 1125
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 TPCTC 7
TPCTC
Sbjct: 1125 TPCTC 1129
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 TPCTC 7
TPCTC
Sbjct: 1121 TPCTC 1125
>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)
Query: 5 CTCND 9
CTCND
Sbjct: 140 CTCND 144
>sp|GLYCO_BEFVB|GLYCOPROTEIN ephemeral fever virus (strain
Query: 3 TPCTCND 9
TPCT ND
Sbjct: 170 TPCTIND 176
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 TPCTC 7
TPCTC
Sbjct: 1123 TPCTC 1127
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 TPCTC 7
TPCTC
Sbjct: 1121 TPCTC 1125
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 TPCTC 7
TPCTC
Sbjct: 1121 TPCTC 1125
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 TPCTC 7
TPCTC
Sbjct: 1121 TPCTC 1125
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 TPCTC 7
TPCTC
Sbjct: 1121 TPCTC 1125
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 TPCTC 7
TPCTC
Sbjct: 1121 TPCTC 1125
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 TPCTC 7
TPCTC
Sbjct: 1121 TPCTC 1125
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 TPCTC 7
TPCTC
Sbjct: 1121 TPCTC 1125
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 TPCTC 7
TPCTC
Sbjct: 1126 TPCTC 1130
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 TPCTC 7
TPCTC
Sbjct: 1121 TPCTC 1125
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 TPCTC 7
TPCTC
Sbjct: 1122 TPCTC 1126
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 4 PCTCNDQ 10
PC C D+
Sbjct: 3219 PCRCQDE 3225
>sp|PRIM_GAHVM|DNA primase|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 2 NTPCTCNDQ 10
+ PC C+D+
Sbjct: 776 DKPCGCHDK 784
>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 2 NTPCTCNDQ 10
N CTC D+
Sbjct: 1824 NIACTCGDK 1832
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 2 NTPCTCNDQ 10
N CTC D+
Sbjct: 1824 NIACTCGDK 1832
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 1 KNTPCTCNDQ 10
K PC NDQ
Sbjct: 180 KAVPCAKNDQ 189
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 NTPCTCNDQ 10
NTP +C D+
Sbjct: 1558 NTPLSCFDE 1566
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 1 KNTPCTCNDQ 10
K PC NDQ
Sbjct: 171 KAVPCAENDQ 180
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 PCTCNDQ 10
PCTC Q
Sbjct: 1786 PCTCGKQ 1792
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 PCTCNDQ 10
PCTC Q
Sbjct: 1786 PCTCGKQ 1792
>sp|RDRP_CMVAS|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain As)
Query: 1 KNTPCTCNDQ 10
K PC+ ND+
Sbjct: 674 KKIPCSDNDE 683
8|SequenceR|45|36|SCVTMKNTPC
>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote
Query: 1 SCVTMKNT 8
SCVT++NT
Sbjct: 3367 SCVTLRNT 3374
>sp|NS1AB_TASV2|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 2 (TAstV-2)
Query: 2 CVTMKNTP 9
CVT +NTP
Sbjct: 951 CVTDENTP 958
>sp|NS1A_TASV2|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 2 (TAstV-2)
Query: 2 CVTMKNTP 9
CVT +NTP
Sbjct: 951 CVTDENTP 958
>sp|MVP1_BYVU|MOVEMENT protein Hsp70h|Beet yellows virus (isolate Ukraine)
Query: 1 SCVTMKNTPC 10
SCV + PC
Sbjct: 166 SCVNLSGYPC 175
>sp|Y095_ABVP|UNCHARACTERIZED protein ORF95|Acidianus bottle-shaped virus (isolate
Query: 2 CVTMKNTP 9
C+T+ NTP
Sbjct: 27 CLTITNTP 34
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 SCVTMKNTP 9
C T+ NTP
Sbjct: 202 GCATLDNTP 210
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 SCVTMKNTP 9
C T+ NTP
Sbjct: 202 GCATLNNTP 210
9|SequenceR|50|41|GPGDPSCVTM
>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29
Query: 1 GPGDPSCVTM 10
GP DPS VT+
Sbjct: 98 GPSDPSIVTL 107
>sp|VL2_HPV56|MINOR capsid protein L2|Human papillomavirus 56
Query: 1 GPGDPSCVTM 10
GP DPS VT+
Sbjct: 97 GPTDPSIVTL 106
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 1 GPGDPSCVTM 10
GP DPS VT+
Sbjct: 97 GPTDPSIVTL 106
>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30
Query: 1 GPGDPSCVTM 10
GP DPS VT+
Sbjct: 97 GPTDPSIVTL 106
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 1 GPGDPSCVTM 10
GP DPS VT+
Sbjct: 97 GPTDPSIVTL 106
>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18
Query: 1 GPGDPSCVTM 10
GP DPS VT+
Sbjct: 97 GPTDPSIVTL 106
>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45
Query: 1 GPGDPSCVTM 10
GP DPS VT+
Sbjct: 97 GPTDPSIVTL 106
>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16
Query: 1 GPGDPSCVTM 10
GP DPS V++
Sbjct: 99 GPSDPSIVSL 108
>sp|VL2_MMPV1|MINOR capsid protein L2|Macaca mulata papillomavirus 1 (Rhpv
Query: 1 GPGDPSCVTM 10
GP DPS V++
Sbjct: 108 GPSDPSIVSL 117
>sp|VL2_HPV42|MINOR capsid protein L2|Human papillomavirus 42
Query: 1 GPGDPSCVTM 10
GP DPS V++
Sbjct: 98 GPSDPSIVSL 107
>sp|Y102_OSHVF|UNCHARACTERIZED protein ORF102|Ostreid herpesvirus 1 (isolate France)
Query: 1 GPGDPS 6
GPG+PS
Sbjct: 598 GPGNPS 603
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 4 DPSCVT 9
DPSC+T
Sbjct: 964 DPSCLT 969
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 1 GPGDPSCVTM 10
GP DPS V++
Sbjct: 98 GPTDPSIVSL 107
>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10
Query: 1 GPGDPSCVTM 10
GP DPS V +
Sbjct: 98 GPSDPSIVNL 107
>sp|TEG3_PSHV1|TEGUMENT protein UL14|Psittacid herpesvirus 1 (isolate Amazon
Query: 1 GPGDPSCV 8
GP D +CV
Sbjct: 187 GPSDATCV 194
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 1 GPGDPSCVTM 10
GP +PS VT+
Sbjct: 98 GPTEPSIVTL 107
>sp|VL2_HPV03|MINOR capsid protein L2|Human papillomavirus 3
Query: 1 GPGDPSCVTM 10
GP DPS V +
Sbjct: 98 GPSDPSIVNL 107
>sp|VL2_HPV28|MINOR capsid protein L2|Human papillomavirus 28
Query: 1 GPGDPSCVTM 10
GP DPS V +
Sbjct: 98 GPSDPSIVNL 107
>sp|PHOSP_NDVU2|PHOSPHOPROTEIN disease virus (strain Ulster/2C)
Query: 1 GPGDPS 6
GPGDPS
Sbjct: 308 GPGDPS 313
>sp|PHOSP_NDVA|PHOSPHOPROTEIN disease virus (strain Chicken/Australia-Victoria/32)
Query: 1 GPGDPS 6
GPGDPS
Sbjct: 308 GPGDPS 313
>sp|CPRT_SBWMN|84 kDa readthrough protein|Soil-borne wheat mosaic virus (strain
Query: 1 GPGDPSC 7
GPG P C
Sbjct: 317 GPGAPLC 323
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 1 GPGDPSCVTM 10
GP +PS VT+
Sbjct: 98 GPTEPSIVTL 107
>sp|YR505_MIMIV|UNCHARACTERIZED protein R505|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 PGDPSC 7
PG+P C
Sbjct: 103 PGEPGC 108
>sp|PHOSP_NDVB1|PHOSPHOPROTEIN disease virus (strain Chicken/United
Query: 1 GPGDPS 6
GPGDPS
Sbjct: 308 GPGDPS 313
>sp|YL193_MIMIV|UNCHARACTERIZED glycosyltransferase L193|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 PGDPSCVTM 10
PG+ C+T+
Sbjct: 510 PGETDCITI 518
>sp|COLL4_MIMIV|COLLAGEN-LIKE protein 4|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 GPGDPSCV 8
G GDP+C+
Sbjct: 32 GNGDPNCI 39
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 2 PGDPSCV 8
PG+P+C+
Sbjct: 180 PGNPNCL 186
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 2 PGDPSCV 8
PG+P+C+
Sbjct: 180 PGNPNCL 186
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PGDPSCV 8
PG+P+C+
Sbjct: 180 PGNPNCL 186
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 GDPSCV 8
GDP C+
Sbjct: 140 GDPKCI 145
>sp|PHOSP_NDVB|PHOSPHOPROTEIN disease virus (strain Beaudette
Query: 1 GPGDPS 6
GPGDPS
Sbjct: 308 GPGDPS 313
>sp|PG143_VACCW|VIRION membrane protein OPG143|Vaccinia virus (strain Western Reserve)
Query: 2 PGDPSCV 8
PG+P+C+
Sbjct: 180 PGNPNCL 186
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PGDPSCV 8
PG+P+C+
Sbjct: 180 PGNPNCL 186
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 2 PGDPSCV 8
PG+P+C+
Sbjct: 180 PGNPNCL 186
>sp|A16_RABPU|VIRION membrane protein A16|Rabbitpox virus (strain Utrecht) (RPV)
Query: 2 PGDPSCV 8
PG+P+C+
Sbjct: 180 PGNPNCL 186
>sp|VL2_HPV32|MINOR capsid protein L2|Human papillomavirus type 32
Query: 1 GPGDPSCVTM 10
GP DPS +++
Sbjct: 98 GPTDPSVISL 107
>sp|G_BPPHK|MAJOR spike protein G|Enterobacteria phage phiK (Bacteriophage phi-K)
Query: 2 PGDPSCV 8
P DP+CV
Sbjct: 74 PADPNCV 80
>sp|POLG_VESVA|GENOME polyprotein|Vesicular exanthema of swine virus
Query: 1 GPGDPSC 7
G GDP C
Sbjct: 1404 GAGDPRC 1410
>sp|VL2_HPV44|MINOR capsid protein L2|Human papillomavirus 44
Query: 1 GPGDPSCVTM 10
PGDPS V++
Sbjct: 98 APGDPSIVSL 107
>sp|VL2_HPV55|MINOR capsid protein L2|Human papillomavirus type 55
Query: 1 GPGDPSCVTM 10
PGDPS V++
Sbjct: 98 APGDPSIVSL 107
>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61
Query: 1 GPGDPSCVTM 10
G DPS VT+
Sbjct: 95 GAADPSIVTL 104
>sp|TGB3_PVSP|MOVEMENT protein TGBp3|Potato virus S (strain Peruvian)
Query: 2 PGDPSCVTM 10
PG+ SCV +
Sbjct: 28 PGNTSCVLL 36
>sp|POLG_SMSV4|GENOME polyprotein|San Miguel sea lion virus
Query: 1 GPGDPSC 7
G GDP C
Sbjct: 738 GAGDPRC 744
>sp|POLG_SMSV1|GENOME polyprotein|San Miguel sea lion virus
Query: 1 GPGDPSC 7
G GDP C
Sbjct: 1403 GAGDPRC 1409
>sp|POLG_FCVC6|GENOME polyprotein|Feline calicivirus (strain CFI/68 FIV)
Query: 1 GPGDPSC 7
G GDP C
Sbjct: 1289 GSGDPRC 1295
>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)
Query: 1 GPGDPSC 7
G GDP C
Sbjct: 1290 GSGDPRC 1296
>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)
Query: 1 GPGDPSC 7
G GDP C
Sbjct: 1290 GSGDPRC 1296
>sp|POLG_FCVF4|GENOME polyprotein|Feline calicivirus (strain Japanese F4)
Query: 1 GPGDPSC 7
G GDP C
Sbjct: 1290 GSGDPRC 1296
>sp|IAP1_NPVOP|APOPTOSIS inhibitor 1|Orgyia pseudotsugata multicapsid polyhedrosis virus
Query: 2 PGDPSCV 8
PG P CV
Sbjct: 113 PGKPRCV 119
>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United States/Urbana/1960)
Query: 1 GPGDPSC 7
G GDP C
Sbjct: 1290 GSGDPRC 1296
10|SequenceR|55|46|CQCRGGPGDP
>sp|CPRT_SBWMN|84 kDa readthrough protein|Soil-borne wheat mosaic virus (strain
Query: 4 RGGPGDP 10
RGGPG P
Sbjct: 315 RGGPGAP 321
>sp|PG095_VARV|ENTRY-FUSION complex associated protein OPG095|Variola virus
Query: 2 QCRGGPGDP 10
+C G PG P
Sbjct: 135 ECYGAPGSP 143
>sp|PG095_VAR67|ENTRY-FUSION complex associated protein OPG095|Variola virus (isolate
Query: 2 QCRGGPGDP 10
+C G PG P
Sbjct: 135 ECYGAPGSP 143
>sp|PG095_VACCW|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain Western
Query: 2 QCRGGPGDP 10
+C G PG P
Sbjct: 135 ECYGAPGSP 143
>sp|PG095_VACCC|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain
Query: 2 QCRGGPGDP 10
+C G PG P
Sbjct: 135 ECYGAPGSP 143
>sp|PG095_VACCA|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain Ankara)
Query: 2 QCRGGPGDP 10
+C G PG P
Sbjct: 135 ECYGAPGSP 143
>sp|PG095_MONPV|ENTRY-FUSION complex associated protein OPG095|Monkeypox virus (MPXV)
Query: 2 QCRGGPGDP 10
+C G PG P
Sbjct: 135 ECYGAPGSP 143
>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA
Query: 3 CRGGP 7
CRGGP
Sbjct: 2037 CRGGP 2041
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 352 CQGVGGPG 359
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 348 CQGVGGPG 355
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 347 CQGVGGPG 354
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 346 CQGVGGPG 353
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 346 CQGVGGPG 353
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 353 CQGVGGPG 360
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 346 CQGVGGPG 353
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|POL_SIVM1|GAG-POL polyprotein|Simian immunodeficiency virus (isolate Mm142-83)
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 351 CQGVGGPG 358
>sp|PORTL_PSHV1|PORTAL protein|Psittacid herpesvirus 1 (isolate Amazon
Query: 3 CRGGPG 8
CRGGP
Sbjct: 725 CRGGPA 730
>sp|POL_SIVSP|GAG-POL polyprotein|Simian immunodeficiency virus (isolate PBj14/BCL-3)
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 352 CQGVGGPG 359
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 352 CQGVGGPG 359
>sp|VP1_AQRVA|OUTER capsid protein VP1|Aquareovirus A (isolate Chum
Query: 6 GPGDP 10
GPGDP
Sbjct: 341 GPGDP 345
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 352 CQGVGGPG 359
>sp|POL_SIVM2|GAG-POL polyprotein|Simian immunodeficiency virus (isolate Mm251)
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 351 CQGVGGPG 358
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 353 CQGVGGPG 360
>sp|MP2_MNSV|DOUBLE gene block protein 2|Melon necrotic spot virus (MNSV)
Query: 1 CQCRGGPGD 9
C+C PGD
Sbjct: 4 CRCDSSPGD 12
>sp|POL_SIVS4|GAG-POL polyprotein|Simian immunodeficiency virus (isolate F236/smH4)
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 352 CQGVGGPG 359
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 352 CQGVGGPG 359
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 351 CQGIGGPG 358
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 3 CRGGPGDP 10
CR PG+P
Sbjct: 176 CRNDPGNP 183
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 5 GGPGDP 10
GGPG P
Sbjct: 6 GGPGKP 11
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 3 CRGGPGDP 10
CR PG+P
Sbjct: 176 CRNDPGNP 183
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 352 CQGIGGPG 359
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 3 CRGGPGDP 10
CR PG+P
Sbjct: 176 CRNDPGNP 183
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 347 CQGIGGPG 354
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 347 CQGIGGPG 354
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 352 CQGVGGPG 359
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|PG143_VACCW|VIRION membrane protein OPG143|Vaccinia virus (strain Western Reserve)
Query: 3 CRGGPGDP 10
CR PG+P
Sbjct: 176 CRNDPGNP 183
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 CRGGPGDP 10
CR PG+P
Sbjct: 176 CRNDPGNP 183
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 3 CRGGPGDP 10
CR PG+P
Sbjct: 176 CRNDPGNP 183
>sp|A16_RABPU|VIRION membrane protein A16|Rabbitpox virus (strain Utrecht) (RPV)
Query: 3 CRGGPGDP 10
CR PG+P
Sbjct: 176 CRNDPGNP 183
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 GGPGDP 10
GGP DP
Sbjct: 682 GGPDDP 687
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 GGPGDP 10
GGP DP
Sbjct: 682 GGPDDP 687
>sp|451L_IIV6|UNCHARACTERIZED protein 451L|Invertebrate iridescent virus 6 (IIV-6)
Query: 2 QCRGGP 7
+C+GGP
Sbjct: 27 RCKGGP 32
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 347 CQGIGGPG 354
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 348 CQGVGGPG 355
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|POL2_GCMV|RNA2 polyprotein|Grapevine chrome mosaic virus (GCMV)
Query: 1 CQCRGGPGD 9
C C G PG+
Sbjct: 96 CTCGGIPGE 104
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 346 CQGVGGPG 353
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 353 CQGVGGPG 360
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 347 CQGVGGPG 354
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 346 CQGVGGPG 353
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 352 CQGVGGPG 359
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 CQCRGGPG 8
CQ GGPG
Sbjct: 350 CQGVGGPG 357
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 5 GGPGDP 10
GGP DP
Sbjct: 1448 GGPADP 1453
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 5 GGPGDP 10
GGP DP
Sbjct: 1448 GGPADP 1453
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 2 QCRGGPGDP 10
QC PG P
Sbjct: 751 QCLADPGSP 759
>sp|PHOSP_NDVU2|PHOSPHOPROTEIN disease virus (strain Ulster/2C)
Query: 6 GPGDP 10
GPGDP
Sbjct: 308 GPGDP 312
>sp|PHOSP_NDVB|PHOSPHOPROTEIN disease virus (strain Beaudette
Query: 6 GPGDP 10
GPGDP
Sbjct: 308 GPGDP 312
>sp|PHOSP_NDVA|PHOSPHOPROTEIN disease virus (strain Chicken/Australia-Victoria/32)
Query: 6 GPGDP 10
GPGDP
Sbjct: 308 GPGDP 312
11|SequenceR|60|51|SGLARCQCRG
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 LARCQCR 9
+ARCQC+
Sbjct: 922 IARCQCK 928
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 LARCQCR 9
+ARC CR
Sbjct: 938 IARCNCR 944
>sp|POLG_BOVEV|GENOME polyprotein|Bovine enterovirus (strain VG-5-27) (BEV)
Query: 3 LARCQCR 9
+ARC CR
Sbjct: 893 IARCNCR 899
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 LARCQCR 9
+ARC CR
Sbjct: 931 IARCSCR 937
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 LARCQC 8
+ARCQC
Sbjct: 913 IARCQC 918
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 LARCQC 8
+ARCQC
Sbjct: 912 IARCQC 917
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 LARCQC 8
+ARCQC
Sbjct: 912 IARCQC 917
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 LARCQC 8
+ARCQC
Sbjct: 903 IARCQC 908
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 LARCQC 8
+ARCQC
Sbjct: 903 IARCQC 908
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 LARCQC 8
+ARCQC
Sbjct: 902 IARCQC 907
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 LARCQC 8
+ARCQC
Sbjct: 902 IARCQC 907
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 LARCQC 8
+ARCQC
Sbjct: 904 IARCQC 909
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 LARCQC 8
+ARCQC
Sbjct: 906 IARCQC 911
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 LARCQC 8
+ARCQC
Sbjct: 901 IARCQC 906
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 LARCQC 8
+ARCQC
Sbjct: 920 IARCQC 925
>sp|DPOL_ELHVK|DNA polymerase catalytic subunit|Elephantid herpesvirus 1 (isolate
Query: 1 SGLARCQCR 9
S L RCQC+
Sbjct: 443 SFLNRCQCK 451
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 2 GLARCQC 8
GL+RC C
Sbjct: 1024 GLSRCDC 1030
>sp|DUHM_BPW14|DEOXYURIDYLATE hydroxymethyltransferase|Delftia phage PhiW-14 (Deftia
Query: 1 SGLARCQCRG 10
+GL+R +C G
Sbjct: 18 AGLSRAKCTG 27
>sp|RDRP_TRVPP|REPLICASE large subunit|Tobacco rattle virus (isolate PpK20)
Query: 1 SGLARCQCRG 10
+G RC C+G
Sbjct: 993 AGAKRCICQG 1002
>sp|POLG_PEV9U|GENOME polyprotein|Porcine enterovirus 9 (strain UKG/410/73)
Query: 3 LARCQC 8
LARC C
Sbjct: 888 LARCHC 893
>sp|194K_TRVSY|REPLICASE large subunit|Tobacco rattle virus (strain SYM)
Query: 1 SGLARCQCRG 10
+G RC C+G
Sbjct: 993 AGAKRCICQG 1002
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 SGLARCQCRG 10
S L +C+C G
Sbjct: 529 SALVKCKCGG 538
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 SGLARCQCRG 10
S L C+C G
Sbjct: 528 SALVECECSG 537
>sp|POL1_TBRVM|RNA1 polyprotein|Tomato black ring virus (strain
Query: 3 LARCQCRG 10
L++C+C G
Sbjct: 2247 LSKCKCAG 2254
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 SGLARCQCRG 10
S L C+C G
Sbjct: 529 SALVECECGG 538
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 SGLARCQCRG 10
S L C+C G
Sbjct: 529 SALVECECGG 538
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 SGLARCQCRG 10
S L C+C G
Sbjct: 529 SALVECECGG 538
12|SequenceR|65|56|DVAMGSGLAR
***** No hits found ******
13|SequenceR|70|61|TLTSCDVAMG
>sp|L_ALLVP|RNA-DIRECTED RNA polymerase L|Allpahuayo mammarenavirus (isolate
Query: 2 LTSCDV 7
LTSCDV
Sbjct: 1514 LTSCDV 1519
>sp|POL2_GFLV|RNA2 polyprotein|Grapevine fanleaf virus (GFLV)
Query: 1 TLTSCDVAMG 10
TL SC + MG
Sbjct: 826 TLVSCVLGMG 835
14|SequenceR|75|66|LLCKSTLTSC
>sp|YR866_MIMIV|UNCHARACTERIZED protein R866|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 LLCKSTLTSC 10
++C+STL+ C
Sbjct: 375 IVCRSTLSKC 384
>sp|VG75_EHV2|PROBABLE membrane antigen 75|Equine herpesvirus 2 (strain 86/87)
Query: 1 LLCKSTLTSC 10
L+C STL +C
Sbjct: 363 LVCTSTLATC 372
>sp|SIGM2_REOVL|INNER capsid protein sigma-2|Reovirus type 1 (strain Lang)
Query: 1 LLCKSTLTSC 10
L+ STLT C
Sbjct: 285 LILSSTLTGC 294
>sp|SIGM2_REOVJ|INNER capsid protein sigma-2|Reovirus type 2 (strain D5/Jones)
Query: 1 LLCKSTLTSC 10
L+ STLT C
Sbjct: 285 LILSSTLTGC 294
>sp|SIGM2_REOVD|INNER capsid protein sigma-2|Reovirus type 3 (strain Dearing)
Query: 1 LLCKSTLTSC 10
L+ STLT C
Sbjct: 285 LILSSTLTGC 294
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 2 LCKSTLTS 9
LCK TLT+
Sbjct: 379 LCKITLTT 386
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 2 LCKSTLTS 9
LCK TLT+
Sbjct: 378 LCKITLTT 385
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 2 LCKSTLTS 9
LCK TLT+
Sbjct: 379 LCKITLTT 386
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 2 LCKSTLTS 9
LCK TLT+
Sbjct: 376 LCKITLTA 383
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 2 LCKSTLTS 9
LCK TLT+
Sbjct: 378 LCKITLTA 385
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 2 LCKSTLTS 9
LCK TLT+
Sbjct: 408 LCKITLTA 415
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 2 LCKSTLTS 9
LCK TLT+
Sbjct: 377 LCKVTLTA 384
>sp|GP57_BPSP1|PUTATIVE gene 57 protein|Bacillus phage SP01 (Bacteriophage SP01)
Query: 2 LCKSTL 7
LCKSTL
Sbjct: 44 LCKSTL 49
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 2 LCKSTLTS 9
LCK TLT+
Sbjct: 380 LCKITLTT 387
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 LLCKSTLTS 9
L+C ST+TS
Sbjct: 437 LVCNSTVTS 445
>sp|Y055_SIFVH|UNCHARACTERIZED protein 55|Sulfolobus islandicus filamentous virus (isolate
Query: 3 CKSTLTSC 10
C++ LTSC
Sbjct: 92 CQNNLTSC 99
15|SequenceR|80|71|MRAKLLLCKS
***** No hits found ******
16|SequenceR|85|76|NKPASMRAKL
>sp|53DR_BPSPB|5'(3')-DEOXYRIBONUCLEOTIDASE phage SPbeta (Bacillus phage
Query: 1 NKPASMRAKL 10
N P S++AKL
Sbjct: 91 NHPDSLKAKL 100
17|SequenceR|90|81|VLTRANKPAS
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TRANKPAS 10
TRAN PAS
Sbjct: 452 TRANSPAS 459
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TRANKPAS 10
TRAN PAS
Sbjct: 448 TRANSPAS 455
>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus
Query: 1 VLTRANKP 8
V+TRA KP
Sbjct: 1279 VMTRAEKP 1286
>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus
Query: 1 VLTRANKP 8
V+TRA KP
Sbjct: 1279 VMTRAEKP 1286
>sp|NCAP_PTPV|NUCLEOPROTEIN toro phlebovirus
Query: 2 LTRANKP 8
LTR NKP
Sbjct: 61 LTRGNKP 67
>sp|NCAP_SFSV|NUCLEOPROTEIN fever sicilian virus (SFS)
Query: 2 LTRANKP 8
LTR NKP
Sbjct: 62 LTRGNKP 68
>sp|NCAP_RVFVZ|NUCLEOPROTEIN valley fever virus (strain
Query: 2 LTRANKP 8
LTR NKP
Sbjct: 62 LTRGNKP 68
>sp|NCAP_RVFV|NUCLEOPROTEIN valley fever virus (RVFV)
Query: 2 LTRANKP 8
LTR NKP
Sbjct: 62 LTRGNKP 68
>sp|POL_BAEVM|GAG-POL polyprotein|Baboon endogenous virus (strain M7)
Query: 1 VLTRANKPAS 10
VLT+AN P S
Sbjct: 572 VLTKANGPLS 581
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TRANKPAS 10
TRAN P S
Sbjct: 452 TRANSPTS 459
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TRANKPAS 10
TRAN P S
Sbjct: 447 TRANSPTS 454
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TRANKPAS 10
TRAN P S
Sbjct: 448 TRANSPTS 455
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TRANKPAS 10
TRAN P S
Sbjct: 459 TRANSPTS 466
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TRANKPAS 10
TRAN P S
Sbjct: 448 TRANSPTS 455
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TRANKPAS 10
TRAN P S
Sbjct: 451 TRANSPTS 458
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TRANKPAS 10
TRAN P S
Sbjct: 452 TRANSPTS 459
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TRANKPAS 10
TRAN P S
Sbjct: 455 TRANSPTS 462
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TRANKPAS 10
TRAN P S
Sbjct: 447 TRANSPTS 454
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TRANKPAS 10
TRAN P S
Sbjct: 452 TRANSPTS 459
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TRANKPAS 10
TRAN P S
Sbjct: 454 TRANSPTS 461
18|SequenceR|95|86|HESPRVLTRA
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 HESPRVLT 8
HESPR++T
Sbjct: 2621 HESPRMVT 2628
>sp|POL_EIAVC|POL polyprotein|Equine infectious anemia virus (isolate
Query: 1 HESPRVLTR 9
H SP++L R
Sbjct: 891 HTSPKILAR 899
>sp|POL_EIAV9|POL polyprotein|Equine infectious anemia virus (isolate
Query: 1 HESPRVLTR 9
H SP++L R
Sbjct: 891 HTSPKILAR 899
>sp|POL_EIAVY|POL polyprotein|Equine infectious anemia virus (strain
Query: 1 HESPRVLTR 9
H SP++L R
Sbjct: 890 HTSPKILAR 898
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 HESPRVLT 8
HE+PR++T
Sbjct: 2622 HEAPRLVT 2629
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 1 HESPRVL 7
HE+PR+L
Sbjct: 356 HETPRLL 362
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HESPRVLTRA 10
H SPR TRA
Sbjct: 213 HPSPRNTTRA 222
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HESPRVLTRA 10
H SPR TRA
Sbjct: 213 HPSPRNTTRA 222
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 HESPRVLT 8
HE PR++T
Sbjct: 2623 HEVPRLIT 2630
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 HESPRVLT 8
HE PR++T
Sbjct: 2623 HEVPRLIT 2630
19|SequenceR|100|91|NDVLAHESPR
>sp|11011_ASFL5|PROTEIN MGF 110-11L|African swine fever virus (isolate
Query: 3 VLAHESPR 10
+LAHE PR
Sbjct: 15 ILAHELPR 22
>sp|L_TAMVU|RNA-DIRECTED RNA polymerase L|Tamiami mammarenavirus (isolate Rat/United
Query: 1 NDVLAHES 8
N++LAH+S
Sbjct: 324 NEILAHKS 331
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 2 DVLAHESP 9
D++AH SP
Sbjct: 388 DLMAHRSP 395
20|SequenceR|105|96|DYLGDNDVLA
>sp|AN_EHV2|SHUTOFF alkaline exonuclease|Equine herpesvirus 2 (strain 86/87)
Query: 1 DYLGDNDVLA 10
DY+GD+ VLA
Sbjct: 68 DYIGDDTVLA 77
>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)
Query: 1 DYLGDNDVL 9
DY GD DV+
Sbjct: 133 DYFGDEDVI 141
>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus
Query: 1 DYLGDNDVL 9
DY GD D++
Sbjct: 133 DYFGDEDII 141
>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus
Query: 1 DYLGDNDVL 9
DY GD D++
Sbjct: 133 DYFGDEDII 141
>sp|ORFA_PSHV1|UNCHARACTERIZED protein ORFA|Psittacid herpesvirus 1 (isolate Amazon
Query: 1 DYLGDNDV 8
+YLGD DV
Sbjct: 129 EYLGDRDV 136
>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)
Query: 1 DYLGDNDVL 9
DYLG+ DV+
Sbjct: 1907 DYLGEVDVV 1915
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 1 DYLGDNDVL 9
DYL + DVL
Sbjct: 72 DYLNEGDVL 80
>sp|POLG_PPVEA|GENOME polyprotein|Plum pox potyvirus (strain El
Query: 1 DYLGDNDV 8
DYLGD+ +
Sbjct: 337 DYLGDDKI 344
>sp|YL167_MIMIV|UNCHARACTERIZED protein L167|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 DYLGDND 7
D+L DND
Sbjct: 17 DFLSDND 23
>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 1 DYLGDNDVL 9
DY+ DN VL
Sbjct: 4007 DYVRDNTVL 4015
>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)
Query: 1 DYLGDNDVL 9
DY+ DN VL
Sbjct: 4001 DYVRDNTVL 4009
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 DYLGDND 7
+YL DND
Sbjct: 109 EYLSDND 115
>sp|YL060_MIMIV|PUTATIVE F-box and FNIP repeat-containing|Acanthamoeba polyphaga mimivirus
Query: 1 DYLGDND 7
+YL DND
Sbjct: 18 EYLSDND 24
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 1 DYLGDNDVL 9
DY+ DN VL
Sbjct: 4007 DYVRDNTVL 4015
>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)
Query: 1 DYLGDNDVL 9
DY+ DN VL
Sbjct: 4001 DYVRDNTVL 4009
21|SequenceR|110|101|PDCDPDYLGD
>sp|MCE_RDVF|PUTATIVE mRNA-capping enzyme P5|Rice dwarf virus (isolate Fujian)
Query: 1 PDCDPDYLG 9
P C PDY G
Sbjct: 146 PKCGPDYYG 154
>sp|MCE_RDVA|PUTATIVE mRNA-capping enzyme P5|Rice dwarf virus (isolate Akita)
Query: 1 PDCDPDYLG 9
P C PDY G
Sbjct: 146 PKCGPDYYG 154
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 2 DCDPDYLGD 10
DCDP LGD
Sbjct: 634 DCDPGNLGD 642
>sp|YL105_MIMIV|UNCHARACTERIZED protein L105|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 CDPDYLGD 10
CDPDY D
Sbjct: 122 CDPDYSAD 129
>sp|RDRP_NCBVS|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Nudaurelia capensis beta virus (isolate
Query: 1 PDCDPD 6
PDC+PD
Sbjct: 1640 PDCEPD 1645
>sp|PYHD_NPVHZ|POLYHEDRIN zea nuclear polyhedrosis virus
Query: 3 CDPDYL 8
CDPDY+
Sbjct: 144 CDPDYI 149
>sp|PYHD_NPVSE|POLYHEDRIN exigua nuclear polyhedrosis virus
Query: 3 CDPDYL 8
CDPDY+
Sbjct: 144 CDPDYV 149
>sp|Y075_OSHVF|UNCHARACTERIZED protein ORF75|Ostreid herpesvirus 1 (isolate France)
Query: 4 DPDYLGD 10
DPDY GD
Sbjct: 181 DPDYKGD 187
>sp|PYHD_NPVSF|POLYHEDRIN frugiperda nuclear polyhedrosis virus
Query: 3 CDPDYL 8
CDPDY+
Sbjct: 144 CDPDYV 149
>sp|PYHD_NPVBS|POLYHEDRIN suppressaria nuclear polyhedrosis virus
Query: 3 CDPDYL 8
CDPDY+
Sbjct: 144 CDPDYV 149
>sp|HN_NDVH3|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Her/33)
Query: 1 PDCDPDYLG 9
P DPDY+G
Sbjct: 126 PVHDPDYIG 134
>sp|PYHD_NPVMB|POLYHEDRIN brassicae nuclear polyhedrosis virus
Query: 3 CDPDYL 8
CDPDY+
Sbjct: 144 CDPDYV 149
>sp|HN_NDVH4|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain B1-Hitchner/47)
Query: 1 PDCDPDYLG 9
P DPDY+G
Sbjct: 126 PIHDPDYIG 134
>sp|HN_NDVB1|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Chicken/United
Query: 1 PDCDPDYLG 9
P DPDY+G
Sbjct: 126 PIHDPDYIG 134
>sp|012L_FRG3G|UNCHARACTERIZED protein 012L|Frog virus 3 (isolate Goorha)
Query: 1 PDCDPD 6
P CDPD
Sbjct: 192 PSCDPD 197
>sp|HN_NDVL|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Chicken/United
Query: 1 PDCDPDYLG 9
P DPDY+G
Sbjct: 126 PIHDPDYIG 134
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 DCDPDYLGD 10
D DPD LG+
Sbjct: 958 DFDPDLLGE 966
>sp|HN_NDVI|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Italien/45)
Query: 1 PDCDPDYLG 9
P DPDY+G
Sbjct: 126 PVHDPDYIG 134
>sp|HN_NDVA|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Chicken/Australia-Victoria/32)
Query: 1 PDCDPDYLG 9
P DPDY+G
Sbjct: 126 PVHDPDYIG 134
>sp|PYHD_NPVAS|POLYHEDRIN segetum nuclear polyhedrosis virus
Query: 3 CDPDYL 8
CDPDY+
Sbjct: 144 CDPDYV 149
>sp|HN_NDVJ|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Iba/85)
Query: 1 PDCDPDYLG 9
P DPDY+G
Sbjct: 126 PVHDPDYIG 134
>sp|HN_NDVM|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Miyadera/51)
Query: 1 PDCDPDYLG 9
P DPDY+G
Sbjct: 126 PVHDPDYIG 134
>sp|HN_NDVQ|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Queensland/66)
Query: 1 PDCDPDYLG 9
P DPDY+G
Sbjct: 126 PIHDPDYIG 134
>sp|HN_NDVD|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain D26/76)
Query: 1 PDCDPDYLG 9
P DPDY+G
Sbjct: 126 PIHDPDYIG 134
>sp|HN_NDVU|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Chicken/Northern
Query: 1 PDCDPDYLG 9
P DPDY+G
Sbjct: 126 PIHDPDYIG 134
>sp|HN_NDVC|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Chi/85)
Query: 1 PDCDPDYLG 9
P DPDY+G
Sbjct: 126 PVHDPDYIG 134
>sp|GC_SUHVF|ENVELOPE glycoprotein C homolog|Suid herpesvirus 1 (strain
Query: 1 PDCDPDYLGD 10
PD DP+Y +
Sbjct: 143 PDADPEYFDE 152
>sp|RPC2_BPP22|REPRESSOR protein C2|Salmonella phage P22 (Bacteriophage P22)
Query: 3 CDPDYL 8
C PDYL
Sbjct: 59 CSPDYL 64
>sp|PYHD_NPVAC|POLYHEDRIN californica nuclear polyhedrosis virus
Query: 3 CDPDYL 8
CDPDY+
Sbjct: 143 CDPDYV 148
>sp|POLG_MRFVC|GENOME polyprotein|Maize rayado fino virus (isolate
Query: 1 PDCDPDYLGD 10
P PDY+GD
Sbjct: 1209 PPLGPDYVGD 1218
>sp|RDRP_PMTVS|REPLICASE large subunit|Potato mop-top virus (isolate Potato/Sweden/Sw)
Query: 1 PDCDPD 6
PD DPD
Sbjct: 712 PDVDPD 717
>sp|TIPJ_BPS27|TIP attachment protein J|Escherichia phage SECphi27
Query: 2 DCDPDY 7
+CDPD+
Sbjct: 42 ECDPDF 47
>sp|SPIKE_PEDV7|SPIKE glycoprotein|Porcine epidemic diarrhea virus (strain
Query: 1 PDCDPDYL 8
PD PDY+
Sbjct: 1236 PDVIPDYI 1243
>sp|YR648_MIMIV|UNCHARACTERIZED protein R648|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 CDPDYLG 9
CDP Y+G
Sbjct: 48 CDPSYIG 54
>sp|NCTSP_BPN4|NON-CONTRACTILE tail sheath|Enterobacteria phage N4 (Bacteriophage N4)
Query: 2 DCDPDYLG 9
+ DP+YLG
Sbjct: 115 ETDPNYLG 122
>sp|GP_SFTS|ENVELOPMENT polyprotein|Dabie bandavirus (Severe fever with
Query: 3 CDPDYLG 9
CD D+LG
Sbjct: 99 CDADWLG 105
>sp|GH_SUHVR|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain Rice)
Query: 1 PDCDPDY 7
PDC P Y
Sbjct: 518 PDCGPAY 524
>sp|YL279_MIMIV|PUTATIVE ankyrin repeat protein L279|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 DCDPDYL 8
DCD DY+
Sbjct: 208 DCDIDYI 214
>sp|Y104A_ATV|UNCHARACTERIZED protein ORF104a|Acidianus two-tailed virus (ATV)
Query: 3 CDPDYL 8
C PDY+
Sbjct: 12 CSPDYI 17
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 3 CDPDYLG 9
CD D+LG
Sbjct: 99 CDADWLG 105
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DCDPDYLG 9
DCDP+ +
Sbjct: 1079 DCDPEVMA 1086
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DCDPDYLG 9
DCDP+ +
Sbjct: 1079 DCDPEVMA 1086
>sp|GH_SUHVK|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain Kaplan)
Query: 1 PDCDPDY 7
PDC P Y
Sbjct: 518 PDCGPAY 524
>sp|YL275_MIMIV|PUTATIVE BTB/POZ domain-containing protein L275|Acanthamoeba polyphaga
Query: 3 CDPDYLG 9
C PDY G
Sbjct: 117 CHPDYSG 123
>sp|HN_NDVK|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Kansas)
Query: 1 PDCDPDYLG 9
P DPD++G
Sbjct: 126 PIHDPDFIG 134
>sp|YL060_MIMIV|PUTATIVE F-box and FNIP repeat-containing|Acanthamoeba polyphaga mimivirus
Query: 3 CDPDYL 8
CDPD++
Sbjct: 522 CDPDFI 527
>sp|GH_SUHVN|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain NIA-3)
Query: 1 PDCDPDY 7
PDC P Y
Sbjct: 518 PDCGPAY 524
>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 3 CDPDYLGD 10
CD DY+ D
Sbjct: 969 CDDDYVED 976
>sp|HN_NDVB|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Beaudette
Query: 1 PDCDPDYLG 9
P DPD++G
Sbjct: 126 PIHDPDFIG 134
>sp|HN_NDVTG|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Chicken/United
Query: 1 PDCDPDYLG 9
P DPD++G
Sbjct: 126 PIHDPDFIG 134
>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 2 DCDPDYLG 9
DCD D +G
Sbjct: 1418 DCDEDAVG 1425
>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 2 DCDPDYLG 9
DCD D +G
Sbjct: 1418 DCDEDAVG 1425
>sp|PYHD_NPVOS|POLYHEDRIN pseudotsugata single capsid nuclear
Query: 3 CDPDYL 8
CDP+Y+
Sbjct: 144 CDPEYV 149
>sp|PYHD_NPVPF|POLYHEDRIN flammea multiple nucleocapsid polyhedrosis
Query: 3 CDPDYL 8
CDP+Y+
Sbjct: 144 CDPEYV 149
>sp|Y068_OSHVF|PUTATIVE transmembrane protein ORF68|Ostreid herpesvirus 1 (isolate
Query: 3 CDPDYL 8
CD DYL
Sbjct: 70 CDTDYL 75
>sp|TOP2_IIV3|DNA topoisomerase 2|Invertebrate iridescent virus 3 (IIV-3)
Query: 2 DCDPDYLGD 10
DC Y+GD
Sbjct: 20 DCSDVYIGD 28
>sp|TIPJ_LAMBD|TIP attachment protein J|Escherichia phage lambda (Bacteriophage
Query: 3 CDPDYLG 9
CD DY G
Sbjct: 482 CDDDYAG 488
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 PDCDPD 6
PD DPD
Sbjct: 1023 PDVDPD 1028
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 3 CDPDYLGD 10
CD DY+ D
Sbjct: 969 CDDDYVED 976
>sp|SHUT_ADECR|SHUTOFF protein|Canine adenovirus serotype 1 (strain
Query: 2 DCDPDY 7
DC PDY
Sbjct: 154 DCLPDY 159
>sp|SHUT_ADECC|SHUTOFF protein|Canine adenovirus serotype 1 (strain
Query: 2 DCDPDY 7
DC PDY
Sbjct: 154 DCLPDY 159
>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 2 DCDPDYLG 9
DCD D +G
Sbjct: 1418 DCDEDAVG 1425
>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 2 DCDPDYLG 9
DCD D +G
Sbjct: 1418 DCDEDAVG 1425
>sp|RDRP_TAV|RNA-DIRECTED RNA polymerase 2a|Tomato aspermy virus (TAV)
Query: 3 CDPDYLGD 10
CD D+ GD
Sbjct: 64 CDSDFTGD 71
>sp|OBP_BPT5|PUTATIVE replication origin binding protein|Escherichia phage T5
Query: 2 DCDPDYLGD 10
DC PD L +
Sbjct: 587 DCGPDELNE 595
>sp|PYHD_NPVSL|POLYHEDRIN littoralis nuclear polyhedrosis virus
Query: 3 CDPDYL 8
CDP+Y+
Sbjct: 147 CDPEYV 152
>sp|RDRP_PAV|RNA-DIRECTED RNA polymerase|Pariacoto virus (PaV)
Query: 3 CDPDYLGD 10
CD DY D
Sbjct: 164 CDVDYYAD 171
22|SequenceR|115|106|KFRGEPDCDP
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 4 GEPDCDP 10
G P+CDP
Sbjct: 80 GNPECDP 86
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 4 GEPDCDP 10
G P+CDP
Sbjct: 80 GNPECDP 86
>sp|BET_FFV|PROTEIN Bet|Feline foamy virus (FFV) (Feline
Query: 3 RGEPDCDP 10
R +PDCDP
Sbjct: 149 RTDPDCDP 156
>sp|095L_IIV3|PROBABLE matrix metalloproteinase 095L|Invertebrate iridescent virus 3
Query: 3 RGEPDCD 9
RGE DCD
Sbjct: 33 RGESDCD 39
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KFRGEPDCDP 10
++R EP C P
Sbjct: 344 RYRNEPFCKP 353
>sp|PAP_GAHVM|DNA polymerase processivity factor|Gallid herpesvirus 2 (strain
Query: 2 FRGEPDC 8
FRGEP C
Sbjct: 121 FRGEPPC 127
>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 3 RGEPDCDP 10
+G PDC P
Sbjct: 691 QGYPDCKP 698
>sp|YL294_MIMIV|UNCHARACTERIZED protein L294|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 GEPDCDP 10
GEP+ DP
Sbjct: 270 GEPNVDP 276
>sp|HEMA_I49A1|HEMAGGLUTININ A virus (strain A/Duck/Germany/1949
Query: 4 GEPDCDP 10
G P CDP
Sbjct: 79 GTPVCDP 85
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 3 RGEPDCDP 10
R +PDC P
Sbjct: 296 RSDPDCVP 303
>sp|Y047_OSHVF|UNCHARACTERIZED protein ORF47|Ostreid herpesvirus 1 (isolate France)
Query: 1 KFRGEPDCDP 10
KF G PD P
Sbjct: 403 KFAGGPDLPP 412
>sp|RING1_BPCA1|RING protein 1|Bacteroides phage crAss001 (Bacteroides phage
Query: 1 KFRGEPDCD 9
++RGE CD
Sbjct: 59 EYRGELPCD 67
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GEPDCD 9
GEP CD
Sbjct: 683 GEPTCD 688
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GEPDCD 9
GEP CD
Sbjct: 683 GEPTCD 688
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 GEPDCD 9
GEP CD
Sbjct: 683 GEPTCD 688
>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 3 RGEPDCD 9
+GEP CD
Sbjct: 1131 KGEPVCD 1137
>sp|GH_SUHVR|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain Rice)
Query: 3 RGEPDCDP 10
R PDC P
Sbjct: 515 RRRPDCGP 522
>sp|GH_SUHVK|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain Kaplan)
Query: 3 RGEPDCDP 10
R PDC P
Sbjct: 515 RRRPDCGP 522
>sp|GH_SUHVN|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain NIA-3)
Query: 3 RGEPDCDP 10
R PDC P
Sbjct: 515 RRRPDCGP 522
23|SequenceR|120|111|NCQRAKFRGE
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 CQRAKFRGE 10
CQ +FRGE
Sbjct: 846 CQELEFRGE 854
>sp|L_AMPV1|RNA-DIRECTED RNA polymerase L|Avian metapneumovirus (isolate Canada
Query: 2 CQRAKFRGE 10
CQ +FRGE
Sbjct: 846 CQELEFRGE 854
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 NCQRAKFRG 9
NC+R+ RG
Sbjct: 129 NCRRSALRG 137
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 NCQRAKFRG 9
NC+R+ RG
Sbjct: 129 NCRRSALRG 137
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 NCQRAKFRG 9
NC+R+ RG
Sbjct: 129 NCRRSALRG 137
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 NCQRAKFRG 9
NC+R+ RG
Sbjct: 129 NCRRSALRG 137
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 NCQRAKFRG 9
NC+R+ RG
Sbjct: 129 NCRRSALRG 137
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 NCQRAKFRG 9
NC+R+ RG
Sbjct: 129 NCRRSALRG 137
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 NCQRAKFRG 9
NC+R+ RG
Sbjct: 129 NCRRSALRG 137
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 NCQRAKFRG 9
NC+R+ RG
Sbjct: 129 NCRRSALRG 137
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 NCQRAKFRG 9
NC+R+ RG
Sbjct: 129 NCRRSALRG 137
>sp|VG54_ICHVA|UNCHARACTERIZED protein ORF54|Ictalurid herpesvirus 1 (strain Auburn)
Query: 2 CQRAKFRG 9
C RA FRG
Sbjct: 331 CLRAGFRG 338
>sp|YL685_MIMIV|UNCHARACTERIZED protein L685|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 NCQRAKFR 8
NC+ KFR
Sbjct: 234 NCRNKKFR 241
>sp|PA_I79A7|POLYMERASE acidic protein|Influenza A virus (strain A/Grey
Query: 2 CQRAKF 7
CQR+KF
Sbjct: 277 CQRSKF 282
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 NCQRAKFRGE 10
NC + + +GE
Sbjct: 1181 NCDKCQLKGE 1190
>sp|POL_SIVMB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate MB66)
Query: 1 NCQRAKFRGE 10
NC + + +GE
Sbjct: 1185 NCDKCQLKGE 1194
24|SequenceR|125|116|CVSTQNCQRA
>sp|L_SV41|RNA-DIRECTED RNA polymerase L|Simian virus 41 (SV41)
Query: 1 CVSTQNC 7
C++T NC
Sbjct: 1140 CITTDNC 1146
>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)
Query: 1 CVSTQNCQ 8
CV+TQ C+
Sbjct: 1344 CVATQYCK 1351
>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)
Query: 1 CVSTQNCQ 8
CV+TQ C+
Sbjct: 1344 CVATQYCK 1351
25|SequenceR|130|121|SNVCWCVSTQ
>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)
Query: 1 SNVCW 5
SNVCW
Sbjct: 1118 SNVCW 1122
>sp|A16_FOWPN|VIRION membrane protein A16 homolog|Fowlpox virus (strain NVSL) (FPV)
Query: 4 CWCVST 9
CWCV+T
Sbjct: 233 CWCVTT 238
>sp|POLN_SAV2|POLYPROTEIN P1234|Alphavirus salmon subtype 2 (SAV2)
Query: 2 NVCWCVST 9
N CW V++
Sbjct: 1041 NTCWAVTS 1048
>sp|POLN_SAV1|POLYPROTEIN P1234|Alphavirus salmon subtype 1 (SAV1)
Query: 2 NVCWCVST 9
N CW V++
Sbjct: 1042 NTCWAVTS 1049
>sp|PG031_VACCC|PROTEIN C4|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SNVCWCVST 9
+N+C+CV T
Sbjct: 171 NNICYCVIT 179
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 SNVCWCVS 8
+NVCW S
Sbjct: 1012 ANVCWAKS 1019
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 SNVCWCVS 8
+NVCW S
Sbjct: 1010 ANVCWAKS 1017
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 SNVCWCVS 8
+NVCW S
Sbjct: 1010 ANVCWAKS 1017
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 SNVCW 5
+NVCW
Sbjct: 1018 TNVCW 1022
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 SNVCW 5
+NVCW
Sbjct: 1018 TNVCW 1022
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 SNVCWCVS 8
+N+C CVS
Sbjct: 603 TNLCKCVS 610
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 SNVCWCVS 8
+N+C CVS
Sbjct: 604 TNLCKCVS 611
>sp|PG031_VAR67|PROTEIN C4|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SNVCWCVST 9
+N+C+CV T
Sbjct: 171 NNLCYCVIT 179
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 SNVCW 5
+NVCW
Sbjct: 1009 ANVCW 1013
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 SNVCW 5
+NVCW
Sbjct: 1009 ANVCW 1013
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 SNVCW 5
+NVCW
Sbjct: 1009 ANVCW 1013
>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)
Query: 1 SNVCW 5
+NVCW
Sbjct: 1009 ANVCW 1013
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 SNVCW 5
+NVCW
Sbjct: 1009 ANVCW 1013
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 NVCWCVS 8
NV WC+S
Sbjct: 570 NVIWCIS 576
>sp|DPOL_CEV01|DNA polymerase|Chrysochromulina ericina virus (CeV01)
Query: 1 SNVCW 5
SN+CW
Sbjct: 694 SNLCW 698
>sp|VF224_IIV3|PROBABLE cysteine proteinase 024R|Invertebrate iridescent virus 3 (IIV-3)
Query: 4 CWCVST 9
CW VST
Sbjct: 132 CWAVST 137
>sp|PG031_VACCW|PROTEIN C4|Vaccinia virus (strain Western Reserve)
Query: 1 SNVCWCVST 9
+N+C+CV T
Sbjct: 171 NNLCYCVIT 179
>sp|PG031_MONPV|PROTEIN OPG031|Monkeypox virus (MPXV)
Query: 1 SNVCWCVST 9
+N+C+CV T
Sbjct: 171 NNLCYCVIT 179
>sp|ROS_AVISU|TYROSINE-PROTEIN kinase transforming protein ros|UR2 avian sarcoma virus (UR2SV)
Query: 1 SNVCWCVST 9
+N C+ VST
Sbjct: 72 ANACYAVST 80
>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)
Query: 1 SNVCW 5
+NVCW
Sbjct: 2239 NNVCW 2243
>sp|L_RYSV|RNA-DIRECTED RNA polymerase L|Rice yellow stunt virus (RYSV)
Query: 1 SNVCW 5
+NVCW
Sbjct: 674 NNVCW 678
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 SNVCW 5
+NVCW
Sbjct: 1010 ANVCW 1014
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 SNVCW 5
+NVCW
Sbjct: 1010 ANVCW 1014
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 SNVCW 5
+NVCW
Sbjct: 1010 ANVCW 1014
>sp|POL_SIVGB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate GB1)
Query: 2 NVCWC 6
++CWC
Sbjct: 33 HLCWC 37
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 SNVCWCVSTQ 10
+NV +C+ TQ
Sbjct: 40 NNVSFCLQTQ 49
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SNVCWCVSTQ 10
+NV +C+ TQ
Sbjct: 40 NNVSFCLQTQ 49
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 SNVCW 5
SN+CW
Sbjct: 410 SNLCW 414
26|SequenceR|135|126|RRVGVSNVCW
>sp|VP5_RRSVT|PUTATIVE minor structural protein VP5|Rice ragged stunt virus (isolate
Query: 2 RVGVSNVCW 10
RV VSN+C+
Sbjct: 304 RVNVSNLCF 312
>sp|VF448_ASFWA|UNCHARACTERIZED protein M448R|African swine fever virus (isolate
Query: 5 VSNVCW 10
VSN CW
Sbjct: 170 VSNYCW 175
>sp|VF448_ASFP4|PUTATIVE RNA-ligase|African swine fever virus (isolate
Query: 5 VSNVCW 10
VSN CW
Sbjct: 170 VSNYCW 175
>sp|VF448_ASFM2|PUTATIVE RNA-ligase|African swine fever virus (isolate
Query: 5 VSNVCW 10
VSN CW
Sbjct: 168 VSNYCW 173
>sp|RLIG_ASFK5|PUTATIVE RNA-ligase|African swine fever virus (isolate
Query: 5 VSNVCW 10
VSN CW
Sbjct: 170 VSNYCW 175
>sp|RLIG_ASFB7|PUTATIVE RNA-ligase|African swine fever virus (strain
Query: 5 VSNVCW 10
VSN CW
Sbjct: 170 VSNYCW 175
>sp|FIBL1_BPT5|SIDE tail fiber protein pb1|Escherichia phage T5 (Enterobacteria phage
Query: 1 RRVGVSNVCW 10
RR+G N+ W
Sbjct: 294 RRLGSPNLAW 303
>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)
Query: 4 GVSNVCW 10
GV+NVC+
Sbjct: 2541 GVTNVCY 2547
>sp|HBSAG_DHBV1|LARGE envelope protein|Duck hepatitis B virus (strain
Query: 1 RRVGVSN 7
RRVG+SN
Sbjct: 71 RRVGLSN 77
>sp|HBSAG_DHBV3|LARGE envelope protein|Duck hepatitis B virus (strain
Query: 1 RRVGVSN 7
RRVG+SN
Sbjct: 71 RRVGLSN 77
>sp|DPOL_CEV01|DNA polymerase|Chrysochromulina ericina virus (CeV01)
Query: 5 VSNVCW 10
+SN+CW
Sbjct: 693 MSNLCW 698
>sp|SPHR_AMEPV|SPHEROIDIN moorei entomopoxvirus (AmEPV)
Query: 4 GVSNVC 9
G+SNVC
Sbjct: 436 GISNVC 441
>sp|POLG_VESVA|GENOME polyprotein|Vesicular exanthema of swine virus
Query: 3 VGVSNVC 9
VGVS VC
Sbjct: 1544 VGVSTVC 1550
>sp|POLG_SMSV1|GENOME polyprotein|San Miguel sea lion virus
Query: 3 VGVSNVC 9
VGVS VC
Sbjct: 1542 VGVSTVC 1548
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 RVGVSNVCW 10
RVG + CW
Sbjct: 231 RVGNQSTCW 239
>sp|POLG_SMSV4|GENOME polyprotein|San Miguel sea lion virus
Query: 3 VGVSNVC 9
VGVS VC
Sbjct: 877 VGVSTVC 883
>sp|VE2_HPV58|REGULATORY protein E2|Human papillomavirus 58
Query: 1 RRVGVSNVC 9
R++G+S++C
Sbjct: 47 RQMGISHLC 55
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 RVGVSNVCW 10
RVG ++ CW
Sbjct: 231 RVGNTSRCW 239
27|SequenceR|140|131|DGKDTRRVGV
***** No hits found ******
28|SequenceR|145|136|CRLSLDGKDT
>sp|CAPSD_CPBDV|CAPSID protein|Chaetoceros protobacilladnavirus 2 (Chaetoceros sp
Query: 1 CRLSLDGKDT 10
C SLDG DT
Sbjct: 209 CLTSLDGTDT 218
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 CRLSLDGKD 9
C L+L+G+D
Sbjct: 950 CHLTLNGED 958
>sp|P2A_SBMVA|POLYPROTEIN P2A|Southern bean mosaic virus (isolate
Query: 1 CRLSLDGKD 9
CR +DG D
Sbjct: 166 CRTKIDGDD 174
>sp|VP4_FDVS|UNCHARACTERIZED protein VP4|Fiji disease virus (isolate Sugarcane)
Query: 3 LSLDGKD 9
L+LDGKD
Sbjct: 889 LALDGKD 895
>sp|HMUDK_BPS10|5-HMDU DNA kinase|Bacillus phage SP10 (Bacillus phage
Query: 3 LSLDGKD 9
L+LDGKD
Sbjct: 63 LTLDGKD 69
>sp|RDRP_SBMVA|REPLICASE polyprotein P2AB|Southern bean mosaic virus (isolate
Query: 1 CRLSLDGKD 9
CR +DG D
Sbjct: 166 CRTKIDGDD 174
>sp|Y019_OSHVF|UNCHARACTERIZED protein ORF19|Ostreid herpesvirus 1 (isolate France)
Query: 4 SLDGKD 9
SLDGKD
Sbjct: 395 SLDGKD 400
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 3 LSLDGKDT 10
L+ DGKDT
Sbjct: 460 LTCDGKDT 467
29|SequenceR|150|141|RVLEDCRLSL
>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)
Query: 1 RVLEDCRL 8
R+LE+CRL
Sbjct: 625 RILEECRL 632
>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)
Query: 1 RVLEDCRLS 9
R+L DCR+S
Sbjct: 3082 RLLLDCRMS 3090
>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)
Query: 1 RVLEDCRLS 9
R+L DCR+S
Sbjct: 3082 RLLLDCRMS 3090
>sp|YL115_MIMIV|PUTATIVE helicase L115|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 VLEDCR 7
+LEDCR
Sbjct: 370 ILEDCR 375
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 VLEDCRLS 9
+L++CRLS
Sbjct: 2884 ILQNCRLS 2891
30|SequenceR|155|146|LIHHTRVLED
>sp|GD_SUHVR|ENVELOPE glycoprotein D|Suid herpesvirus 1 (strain Rice)
Query: 2 IHHTRVLED 10
++HTR LED
Sbjct: 56 VYHTRPLED 64
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 35 LAHGVRVLED 44
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 35 LAHGVRVLED 44
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 23 LAHGVRVLED 32
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 35 LAHGVRVLED 44
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 LIHHTRVLED 10
L H RVLED
Sbjct: 151 LAHGVRVLED 160
>sp|P4B_FOWPN|MAJOR core protein 4b|Fowlpox virus (strain NVSL) (FPV)
Query: 1 LIHHTRVLED 10
L+HHT + ED
Sbjct: 609 LMHHTVMFED 618
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 1 LIHHTRVLED 10
L HH+ ++ED
Sbjct: 514 LAHHSDLMED 523
>sp|L_CPXVB|RNA-DIRECTED RNA polymerase L|Cupixi mammarenavirus (isolate Rat/Brasil/BeAn
Query: 2 IHHTRVLED 10
IH+ R++ED
Sbjct: 2198 IHNPRIVED 2206
>sp|PTPH2_MDBVW|TYROSINE phosphatase H2|Microplitis demolitor bracovirus (isolate Webb)
Query: 2 IHHTRVL 8
+HHTR++
Sbjct: 114 MHHTRII 120
>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain
Query: 3 HHTRVLE 9
HHTRV +
Sbjct: 2093 HHTRVCD 2099
>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain
Query: 3 HHTRVLE 9
HHTRV +
Sbjct: 2096 HHTRVCD 2102
>sp|VP35_FOWPN|IMMUNODOMINANT envelope protein p35|Fowlpox virus (strain NVSL) (FPV)
Query: 1 LIHHTRVLED 10
L+ HT++L+D
Sbjct: 157 LVTHTKLLKD 166
>sp|L_IPPYV|RNA-DIRECTED RNA polymerase L|Ippy mammarenavirus (isolate Rat/Central African
Query: 4 HTRVLED 10
H R+LED
Sbjct: 1720 HNRILED 1726
>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)
Query: 1 LIHHTRVLED 10
L H TR+LE+
Sbjct: 620 LSHFTRILEE 629
31|SequenceR|160|151|HRLDILIHHT
>sp|VF309_IIV3|UNCHARACTERIZED protein 063R|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 HRLDILIHHT 10
HR DIL HT
Sbjct: 182 HREDILASHT 191
>sp|NEF_HV1S1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 LDILIHHT 10
LD+ IHHT
Sbjct: 112 LDLWIHHT 119
>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 LDILIHHT 10
LD+ IHHT
Sbjct: 110 LDLWIHHT 117
>sp|CAPSD_WCCVB|CAPSID protein|White clover cryptic virus 1
Query: 1 HRLDILIHH 9
H LD+L++H
Sbjct: 154 HDLDVLLNH 162
>sp|OBP_BHV1C|REPLICATION origin-binding protein|Bovine herpesvirus 1.1 (strain Cooper)
Query: 1 HRLDILIH 8
HR+D L+H
Sbjct: 194 HRVDALLH 201
>sp|RANT_BPP22|ANTIREPRESSOR protein ant|Salmonella phage P22 (Bacteriophage P22)
Query: 4 DILIHHT 10
D+LI+HT
Sbjct: 262 DVLINHT 268
>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 3 LDILIHHT 10
LD+ I+HT
Sbjct: 3165 LDVCIYHT 3172
>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 3 LDILIHHT 10
LD+ I+HT
Sbjct: 3166 LDVCIYHT 3173
>sp|YR096_MIMIV|PUTATIVE ankyrin repeat protein R96|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 HRLDILIH 8
HR+D +IH
Sbjct: 606 HRIDRMIH 613
32|SequenceR|165|156|GATPRHRLDI
>sp|RDRP_ACLSA|RNA-DIRECTED RNA polymerase|Apple chlorotic leaf spot virus
Query: 4 PRHRLD 9
PRHR+D
Sbjct: 1463 PRHRMD 1468
>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)
Query: 2 ATPRHRL 8
A PRHRL
Sbjct: 517 ALPRHRL 523
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 GATPRHRL 8
G TP HR+
Sbjct: 1682 GGTPTHRI 1689
>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)
Query: 1 GATPRHRL 8
G TP HR+
Sbjct: 1676 GGTPTHRI 1683
>sp|VP5_LDCPR|PUTATIVE structural protein VP5|Lymantria dispar cypovirus 1 (isolate
Query: 1 GATPRHRLDI 10
+TPR+R D+
Sbjct: 140 ASTPRYRADM 149
>sp|POL_JEMBR|GAG-POL polyprotein|Jembrana disease virus (JDV)
Query: 2 ATPRHRLDI 10
+TP+ RLDI
Sbjct: 190 STPQWRLDI 198
>sp|ENV_FLVGL|ENVELOPE glycoprotein|Feline leukemia virus (strain A/Glasgow-1)
Query: 2 ATPRHRLDI 10
+TP+H+L I
Sbjct: 344 STPQHKLTI 352
>sp|POL_BIV29|GAG-POL polyprotein|Bovine immunodeficiency virus (strain R29)
Query: 2 ATPRHRLDI 10
+TP+ RLD+
Sbjct: 206 STPKWRLDV 214
>sp|ENV_FLVSA|ENVELOPE glycoprotein|Feline leukemia virus (strain C/Sarma)
Query: 2 ATPRHRLDI 10
+TP+H+L I
Sbjct: 341 STPQHKLTI 349
>sp|GAG_BIV29|GAG polyprotein|Bovine immunodeficiency virus (strain R29)
Query: 2 ATPRHRLDI 10
+TP+ RLD+
Sbjct: 206 STPKWRLDV 214
>sp|ENV_FSVSM|ENVELOPE glycoprotein|Feline sarcoma virus (strain SM)
Query: 2 ATPRHRLDI 10
+TP+H+L I
Sbjct: 347 STPQHKLTI 355
>sp|ENV_FLVCS|ENVELOPE glycoprotein|Feline leukemia virus (strain C/FS246)
Query: 2 ATPRHRLDI 10
+TP+H+L I
Sbjct: 314 STPQHKLTI 322
>sp|GAG_JEMBR|GAG polyprotein|Jembrana disease virus (JDV)
Query: 2 ATPRHRLDI 10
+TP+ RLDI
Sbjct: 190 STPQWRLDI 198
>sp|LTP_EHV2|LARGE tegument protein deneddylase|Equine herpesvirus 2 (strain 86/87)
Query: 1 GATPRHRLDI 10
GA+P HR+ +
Sbjct: 574 GASPGHRVPV 583
33|SequenceR|170|161|SHNFAGATPR
>sp|POL2_GFLVN|RNA2 polyprotein|Grapevine fanleaf virus (isolate NW)
Query: 3 NFAGATP 9
NFAGA P
Sbjct: 1060 NFAGANP 1066
>sp|POL2_GFLV|RNA2 polyprotein|Grapevine fanleaf virus (GFLV)
Query: 3 NFAGATP 9
NFAGA P
Sbjct: 1059 NFAGANP 1065
>sp|POL2_ARMVN|RNA2 polyprotein|Arabis mosaic virus (isolate NW)
Query: 3 NFAGATP 9
NFAGA P
Sbjct: 1060 NFAGANP 1066
34|SequenceR|175|166|EADLDSHNFA
>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)
Query: 1 EADLDSHNF 9
+ DLDS NF
Sbjct: 28 DIDLDSFNF 36
>sp|VP03_SHV21|PROBABLE membrane antigen 3|Saimiriine herpesvirus 2 (strain 11)
Query: 1 EADLDSH 7
E D+DSH
Sbjct: 637 ETDIDSH 643
35|SequenceR|180|171|FLRRLEADLD
>sp|VE4_HPV39|PROTEIN E4|Human papillomavirus 39
Query: 3 RRLEADLD 10
RRLE+DLD
Sbjct: 42 RRLESDLD 49
36|SequenceR|185|176|RYRERFLRRL
>sp|RDRP_FDVS|RNA-DIRECTED RNA polymerase VP1|Fiji disease virus (isolate Sugarcane)
Query: 1 RYRERFLRRL 10
+Y E+F+RRL
Sbjct: 782 KYHEQFVRRL 791
>sp|Y15K_PMV|UNCHARACTERIZED 14.7 kDa protein in|Papaya mosaic potexvirus (PMV)
Query: 1 RYRERFLRRL 10
+YR+ FLR +
Sbjct: 99 KYRQNFLREV 108
>sp|RDRP_BBMV|RNA-DIRECTED RNA polymerase 2a|Broad bean mottle virus
Query: 2 YRERFLR 8
YRE FLR
Sbjct: 694 YRENFLR 700
37|SequenceR|190|181|FKPHLRYRER
>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 2 KPHLRY 7
KPH+RY
Sbjct: 3023 KPHVRY 3028
>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)
Query: 2 KPHLRY 7
KPH+RY
Sbjct: 2976 KPHVRY 2981
>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 2 KPHLRY 7
KPH+RY
Sbjct: 2983 KPHVRY 2988
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 2 KPHLRY 7
KPH+RY
Sbjct: 3023 KPHVRY 3028
>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)
Query: 2 KPHLRY 7
KPH+RY
Sbjct: 2976 KPHVRY 2981
>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 2 KPHLRY 7
KPH+RY
Sbjct: 2983 KPHVRY 2988
>sp|YR369_MIMIV|UNCHARACTERIZED protein R369|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 PHLRYRER 10
P+L Y+ER
Sbjct: 430 PYLNYKER 437
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 FKPHLRYRER 10
F P++RY R
Sbjct: 457 FNPYVRYSHR 466
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 FKPHLRYRER 10
F P++RY R
Sbjct: 457 FNPYVRYSHR 466
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 2 KPHLRYRE 9
KP LRY+E
Sbjct: 517 KPFLRYQE 524
>sp|RDRP_PVSP|RNA replication protein|Potato virus S (strain Peruvian)
Query: 1 FKPHLRYRER 10
F P++RY E+
Sbjct: 96 FAPYMRYIEK 105
>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)
Query: 1 FKPHLRYRER 10
F P++RY E+
Sbjct: 1707 FAPYMRYIEK 1716
>sp|DPOL_PPV01|DNA polymerase|Phaeocystis pouchetii virus (PpV01)
Query: 2 KPHLRY 7
KPH RY
Sbjct: 425 KPHTRY 430
>sp|027R_FRG3G|UNCHARACTERIZED protein 027R|Frog virus 3 (isolate Goorha)
Query: 3 PHLRY 7
PHLRY
Sbjct: 537 PHLRY 541
38|SequenceR|195|186|HVAAVFKPHL
>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)
Query: 2 VAAVFKPHL 10
+ +++KPHL
Sbjct: 779 IKSIYKPHL 787
>sp|MVP_TEV|P3N-PIPO polyprotein|Tobacco etch virus (TEV)
Query: 2 VAAVFKPHL 10
+ +++KPHL
Sbjct: 779 IKSIYKPHL 787
>sp|325L_IIV6|UNCHARACTERIZED protein 325L|Invertebrate iridescent virus 6 (IIV-6)
Query: 4 AVFKPHL 10
A+FKPH+
Sbjct: 22 AMFKPHV 28
39|SequenceR|200|191|TPQEYHVAAV
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 TPQEYHVAA 9
TPQ YH+ A
Sbjct: 1429 TPQLYHILA 1437
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 TPQEYHVAA 9
TPQ YH+ A
Sbjct: 1429 TPQLYHILA 1437
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 TPQEYHVAA 9
TPQ YH+ A
Sbjct: 1429 TPQLYHILA 1437
>sp|125R_IIV3|UNCHARACTERIZED protein 125R|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 TPQEYHVAA 9
TPQE H AA
Sbjct: 155 TPQELHDAA 163
>sp|YL138_MIMIV|UNCHARACTERIZED protein L138|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 TPQEYHVA 8
TP+EY VA
Sbjct: 740 TPKEYDVA 747
>sp|GLYCO_LNYV3|GLYCOPROTEIN necrotic yellows virus (isolate
Query: 2 PQEYHVAA 9
P+EYH A+
Sbjct: 140 PEEYHYAS 147
>sp|PACA_BPP7|TERMINASE A protein|Enterobacteria phage P7 (Bacteriophage P7)
Query: 1 TPQEYHVAAV 10
TP EY +A++
Sbjct: 210 TPPEYRIASM 219
>sp|PACA_BPP1|TERMINASE A protein|Escherichia phage P1 (Bacteriophage P1)
Query: 1 TPQEYHVAAV 10
TP EY +A++
Sbjct: 210 TPPEYRIASM 219
>sp|RPOB_NPVSL|PROBABLE DNA-directed RNA polymerase subunit|Spodoptera littoralis nuclear
Query: 1 TPQEYH 6
TP EYH
Sbjct: 507 TPYEYH 512
>sp|LEF8_NPVAC|PROBABLE DNA-directed RNA polymerase catalytic|Autographa californica
Query: 1 TPQEYH 6
TP EYH
Sbjct: 478 TPYEYH 483
>sp|RPOB_NPVOP|PROBABLE DNA-directed RNA polymerase subunit|Orgyia pseudotsugata
Query: 1 TPQEYH 6
TP EYH
Sbjct: 488 TPYEYH 493
40|SequenceR|205|196|LEIQITPQEY
>sp|POLN_SAV1|POLYPROTEIN P1234|Alphavirus salmon subtype 1 (SAV1)
Query: 3 IQITPQEY 10
+QITP++Y
Sbjct: 1058 VQITPEDY 1065
>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 4 QITPQEY 10
Q+TP+EY
Sbjct: 692 QVTPREY 698
>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 4 QITPQEY 10
Q+TP+EY
Sbjct: 692 QVTPREY 698
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 LEIQITPQEY 10
LEI I QEY
Sbjct: 175 LEIDIEDQEY 184
>sp|Y43_BPR18|UNCHARACTERIZED protein ORF43.1 in regA|Enterobacteria phage RB18 (Bacteriophage
Query: 5 ITPQEY 10
ITPQEY
Sbjct: 4 ITPQEY 9
>sp|Y117_OSHVF|PUTATIVE RING finger protein ORF117|Ostreid herpesvirus 1 (isolate France)
Query: 3 IQITPQE 9
IQITP+E
Sbjct: 40 IQITPKE 46
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 LEIQITPQEY 10
++ ++TPQ+Y
Sbjct: 359 IQAKLTPQQY 368
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 LEIQITPQEY 10
++ ++TPQ+Y
Sbjct: 359 IQAKLTPQQY 368
>sp|DPOL_BPPH2|DNA polymerase|Bacillus phage phi29 (Bacteriophage phi-29)
Query: 4 QITPQEY 10
+ITP+EY
Sbjct: 157 KITPEEY 163
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 LEIQITPQEY 10
++ ++TPQ+Y
Sbjct: 359 IQARLTPQQY 368
>sp|DPOL_BPNF|DNA polymerase|Bacillus phage Nf (Bacteriophage Nf)
Query: 4 QITPQEY 10
+ITP+EY
Sbjct: 154 EITPEEY 160
>sp|DPOL_BPM2|DNA polymerase|Bacillus phage M2 (Bacteriophage M2)
Query: 4 QITPQEY 10
+ITP+EY
Sbjct: 154 EITPEEY 160
>sp|DPOL_BPB03|DNA polymerase|Bacillus phage B103 (Bacteriophage B103)
Query: 4 QITPQEY 10
+ITP+EY
Sbjct: 154 EITPEEY 160
41|SequenceR|210|201|STNQRLEIQI
>sp|VNS1_AQRVG|NON-STRUCTURAL protein 1|Aquareovirus G (isolate American grass
Query: 1 STNQRLEIQI 10
++NQ L+IQI
Sbjct: 518 ASNQELQIQI 527
>sp|NSP3_ROTGA|NON-STRUCTURAL protein 3|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 2 TNQRLEIQI 10
TNQRL QI
Sbjct: 193 TNQRLRKQI 201
42|SequenceR|215|206|GAAKQSTNQR
***** No hits found ******
43|SequenceR|220|211|GIDVDGAAKQ
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GIDVDGAA 8
GID DGAA
Sbjct: 598 GIDCDGAA 605
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GIDVDGAA 8
GID DGAA
Sbjct: 598 GIDCDGAA 605
>sp|L_RYSV|RNA-DIRECTED RNA polymerase L|Rice yellow stunt virus (RYSV)
Query: 2 IDVDGAAKQ 10
ID+DG K+
Sbjct: 367 IDIDGGVKK 375
>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 1 GIDVDGAA 8
G+DVDG
Sbjct: 1175 GVDVDGGG 1182
44|SequenceR|225|216|YYAADGIDVD
>sp|Y119_NPVOP|UNCHARACTERIZED 59.0 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 1 YYAADGIDV 9
Y+AADG++V
Sbjct: 270 YHAADGVEV 278
>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 3 AADGIDVD 10
++DG+DVD
Sbjct: 1172 SSDGVDVD 1179
>sp|DPOL_MIMIV|DNA polymerase|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 YYAADG 6
YYAADG
Sbjct: 1296 YYAADG 1301
>sp|GH_MEHV1|ENVELOPE glycoprotein H|Meleagrid herpesvirus 1 (MeHV-1) (Turkey
Query: 2 YAADGIDVD 10
Y DG+DV+
Sbjct: 643 YTVDGVDVN 651
>sp|VF022_IIV6|PUTATIVE helicase 022L|Invertebrate iridescent virus 6 (IIV-6)
Query: 1 YYAADGID 8
YY DG+D
Sbjct: 962 YYRIDGVD 969
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 YAADGIDVD 10
Y A GIDV+
Sbjct: 544 YVATGIDVE 552
>sp|GH_FHV1|ENVELOPE glycoprotein H|Feline herpesvirus 1 (FeHV-1) (Feline
Query: 2 YAADGIDV 9
Y DGIDV
Sbjct: 663 YIVDGIDV 670
>sp|SPIKE_ADEB3|FIBER protein|Bovine adenovirus B serotype 3
Query: 2 YAADGIDV 9
Y DGID+
Sbjct: 284 YPGDGIDI 291
>sp|GH_GAHVR|ENVELOPE glycoprotein H|Gallid herpesvirus 2 (strain RB-1b)
Query: 2 YAADGIDVD 10
Y DG+DV+
Sbjct: 651 YNVDGVDVN 659
>sp|GH_GAHVM|ENVELOPE glycoprotein H|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 2 YAADGIDVD 10
Y DG+DV+
Sbjct: 651 YNVDGVDVN 659
>sp|SHUT_ADEGX|SHUTOFF protein|Fowl adenovirus C serotype 10
Query: 1 YYAADG 6
YY+ADG
Sbjct: 63 YYSADG 68
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 1 YYAADGIDVD 10
Y DGIDV+
Sbjct: 6455 YTKVDGIDVE 6464
>sp|V17_SPTNK|UNCHARACTERIZED protein V17|Sputnik virophage
Query: 1 YYAADGIDVD 10
YY DG +D
Sbjct: 18 YYVEDGYTID 27
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 YYAADGIDVD 10
Y DGIDV+
Sbjct: 6461 YTKVDGIDVE 6470
>sp|YORT_TTV1K|UNCHARACTERIZED 38.7 kDa protein|Thermoproteus tenax virus 1 (strain
Query: 2 YAADGID 8
YA DGID
Sbjct: 300 YAVDGID 306
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 2 YAADGIDVD 10
+AA+G+D D
Sbjct: 1103 HAAEGLDYD 1111
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 2 YAADGIDVD 10
+AA+G+D D
Sbjct: 1103 HAAEGLDYD 1111
>sp|SHUT_ADEG1|SHUTOFF protein|Fowl adenovirus A serotype 1
Query: 1 YYAADG 6
YY+ADG
Sbjct: 164 YYSADG 169
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 YYAADGIDVD 10
Y DG+DV+
Sbjct: 6484 YTKVDGVDVE 6493
45|SequenceR|230|221|IDREFYYAAD
>sp|VG67_ICHVA|UNCHARACTERIZED protein ORF67|Ictalurid herpesvirus 1 (strain Auburn)
Query: 2 DREFYYA 8
DREF+YA
Sbjct: 1189 DREFFYA 1195
>sp|CAPSD_CMVPE|CAPSID protein|Cucumber mosaic virus (strain Pepo)
Query: 1 IDREFYYA 8
IDRE YY
Sbjct: 80 IDRESYYG 87
>sp|CAPSD_CMVC|CAPSID protein|Cucumber mosaic virus (strain C)
Query: 1 IDREFYYA 8
IDRE YY
Sbjct: 80 IDRESYYG 87
>sp|L_SYNV|RNA-DIRECTED RNA polymerase L|Sonchus yellow net virus (SYNV)
Query: 2 DREFYYA 8
DR+FY+A
Sbjct: 2070 DRKFYHA 2076
>sp|CAPSD_CMVY|CAPSID protein|Cucumber mosaic virus (strain Y)
Query: 1 IDREFYYA 8
IDRE YY
Sbjct: 80 IDRESYYG 87
>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)
Query: 1 IDREFYYAAD 10
I FYYA D
Sbjct: 2103 IQTHFYYATD 2112
>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)
Query: 1 IDREFYYAAD 10
I FYYA D
Sbjct: 2103 IQTHFYYATD 2112
>sp|36019_ASFWA|PROTEIN MGF 360-19R|African swine fever virus (isolate
Query: 1 IDREFYY 7
I RE+YY
Sbjct: 23 ISREYYY 29
>sp|36018_ASFWA|PROTEIN MGF 360-18R|African swine fever virus (isolate
Query: 1 IDREFYY 7
I RE+YY
Sbjct: 23 ISREYYY 29
>sp|36019_ASFB7|PROTEIN MGF 360-19R|African swine fever virus (strain
Query: 1 IDREFYY 7
I RE+YY
Sbjct: 24 ISREYYY 30
>sp|Y119_NPVOP|UNCHARACTERIZED 59.0 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 3 REFYYAAD 10
R FY+AAD
Sbjct: 267 RLFYHAAD 274
>sp|36019_ASFP4|PROTEIN MGF 360-19R|African swine fever virus (isolate
Query: 1 IDREFYY 7
I RE+YY
Sbjct: 23 ISREYYY 29
46|SequenceR|235|226|LSEGKIDREF
>sp|VF117_IIV6|UNCHARACTERIZED protein 117L|Invertebrate iridescent virus 6 (IIV-6)
Query: 2 SEGKIDREF 10
SEG+ DR F
Sbjct: 210 SEGRFDRAF 218
>sp|YL377_MIMIV|PUTATIVE ATP-dependent RNA helicase L377|Acanthamoeba polyphaga mimivirus
Query: 3 EGKIDREF 10
EG IDRE+
Sbjct: 937 EGPIDREY 944
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 3 EGKIDRE 9
EGKID E
Sbjct: 138 EGKIDNE 144
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 EGKIDRE 9
EGKID E
Sbjct: 140 EGKIDNE 146
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 EGKIDRE 9
EGKID E
Sbjct: 140 EGKIDNE 146
47|SequenceR|240|231|GRGQFLSEGK
>sp|VP21_BPAPS|PUTATIVE protein p21|Acyrthosiphon pisum secondary endosymbiont phage
Query: 1 GRGQFLSEGK 10
GRG+ L+ GK
Sbjct: 82 GRGRILARGK 91
>sp|POL1_TORVR|RNA1 polyprotein|Tomato ringspot virus (isolate raspberry)
Query: 1 GRGQFLSEGK 10
G G FLS GK
Sbjct: 424 GFGNFLSRGK 433
>sp|RNC_IIV3|PUTATIVE ribonuclease 3|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 GRGQFLSEG 9
G G FL EG
Sbjct: 289 GNGNFLGEG 297
>sp|POL1_BAYMY|GENOME polyprotein 1|Barley yellow mosaic virus (isolate
Query: 2 RGQFLSEG 9
RGQF EG
Sbjct: 1332 RGQFRQEG 1339
>sp|POL1_BAYMJ|GENOME polyprotein 1|Barley yellow mosaic virus (strain
Query: 2 RGQFLSEG 9
RGQF EG
Sbjct: 1332 RGQFRQEG 1339
>sp|POL1_BAYMG|GENOME polyprotein 1|Barley yellow mosaic virus (isolate
Query: 2 RGQFLSEG 9
RGQF EG
Sbjct: 1332 RGQFRQEG 1339
>sp|CAPSD_ANV1|CAPSID polyprotein VP90|Avian nephritis virus 1 (ANV-1)
Query: 1 GRGQFLSEG 9
G G +LSEG
Sbjct: 499 GTGSYLSEG 507
48|SequenceR|245|236|RLDLGGRGQF
>sp|POL_MLVFP|GAG-POL polyprotein|Friend murine leukemia virus (isolate
Query: 2 LDLGGRGQF 10
L LGG GQF
Sbjct: 217 LRLGGNGQF 225
>sp|GGAG_MLVFP|GLYCO-GAG protein|Friend murine leukemia virus (isolate
Query: 2 LDLGGRGQF 10
L LGG GQF
Sbjct: 305 LRLGGNGQF 313
>sp|GAG_MLVFP|GAG polyprotein|Friend murine leukemia virus (isolate
Query: 2 LDLGGRGQF 10
L LGG GQF
Sbjct: 217 LRLGGNGQF 225
>sp|VF213_IIV6|TRANSMEMBRANE protein 213R|Invertebrate iridescent virus 6 (IIV-6)
Query: 1 RLDLGGRGQF 10
R LGG GQF
Sbjct: 513 RRMLGGTGQF 522
>sp|POLG_BOVEV|GENOME polyprotein|Bovine enterovirus (strain VG-5-27) (BEV)
Query: 1 RLDLGGRG 8
RL+LGG G
Sbjct: 402 RLELGGSG 409
>sp|POL_MLVFF|GAG-POL polyprotein|Friend murine leukemia virus (isolate
Query: 2 LDLGGRGQF 10
L LGG GQ+
Sbjct: 217 LRLGGNGQY 225
>sp|CEP2_EHV2|CYTOPLASMIC envelopment protein 2|Equine herpesvirus 2 (strain 86/87)
Query: 3 DLGGRGQ 9
D+GGRG+
Sbjct: 49 DVGGRGR 55
>sp|GAG_MLVFF|GAG polyprotein|Friend murine leukemia virus (isolate
Query: 2 LDLGGRGQF 10
L LGG GQ+
Sbjct: 217 LRLGGNGQY 225
>sp|GGAG_MLVFF|GLYCO-GAG protein|Friend murine leukemia virus (isolate
Query: 2 LDLGGRGQF 10
L LGG GQ+
Sbjct: 305 LRLGGNGQY 313
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 2 LDLGGRG 8
LDLGG G
Sbjct: 560 LDLGGSG 566
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 2 LDLGGRG 8
LDLGG G
Sbjct: 565 LDLGGSG 571
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 2 LDLGGRG 8
LDLGG G
Sbjct: 565 LDLGGSG 571
49|SequenceR|250|241|PEGRVRLDLG
>sp|I1_FOWPN|TELOMERE-BINDING protein I1 homolog|Fowlpox virus (strain NVSL) (FPV)
Query: 1 PEGRVRLDL 9
PE R+ LDL
Sbjct: 48 PENRIPLDL 56
>sp|RPC1_BPHC1|REPRESSOR protein CI|Haemophilus phage HP1 (strain HP1c1)
Query: 1 PEGRVRLDLG 10
P G++R+D G
Sbjct: 158 PAGKIRVDGG 167
>sp|BPI_BPP2|BASEPLATE protein I|Escherichia phage P2 (Bacteriophage P2)
Query: 1 PEGRVRLDLG 10
P G RLD+G
Sbjct: 109 PPGTFRLDIG 118
>sp|PKG3_ADEB3|PACKAGING protein 3|Bovine adenovirus B serotype 3
Query: 1 PEGRVRLDL 9
PEGR LDL
Sbjct: 215 PEGRWMLDL 223
>sp|TERL_BPP7|PROBABLE terminase, large subunit|Enterobacteria phage P7 (Bacteriophage P7)
Query: 3 GRVRLDLG 10
GR+RLD G
Sbjct: 412 GRMRLDKG 419
>sp|TERL_BPP1|PROBABLE terminase, large subunit|Escherichia phage P1 (Bacteriophage P1)
Query: 3 GRVRLDLG 10
GR+RLD G
Sbjct: 412 GRMRLDKG 419
>sp|PKG3_ADEG1|PACKAGING protein 3|Fowl adenovirus A serotype 1
Query: 1 PEGRVRLD 8
P+GRV+L+
Sbjct: 210 PDGRVKLN 217
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 1 PEGRVRLDL 9
PEGR LDL
Sbjct: 237 PEGRWLLDL 245
>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2
Query: 1 PEGRVRLDL 9
PEGR LDL
Sbjct: 237 PEGRWLLDL 245
50|SequenceR|255|246|REVQLPEGRV
>sp|FIBER_BPSFV|TAIL spike protein|Shigella phage Sf6 (Shigella flexneri
Query: 2 EVQLPEGR 9
EVQ PEGR
Sbjct: 532 EVQKPEGR 539
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 REVQLPEGRV 10
R + +PEGRV
Sbjct: 2558 RNMVIPEGRV 2567
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 REVQLPEGRV 10
R + +PEGRV
Sbjct: 2558 RNMVIPEGRV 2567
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 REVQLPEGRV 10
R + +PEGRV
Sbjct: 2558 RNMVIPEGRV 2567
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 REVQLPEGRV 10
R + +PEGRV
Sbjct: 2558 RNMVIPEGRV 2567
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 REVQLPEGRV 10
R + +PEGRV
Sbjct: 2558 RNMVVPEGRV 2567
>sp|RDRP_SMYEA|RNA replication protein|Strawberry mild yellow edge-associated virus
Query: 1 REVQLPEGR 9
RE+++PE +
Sbjct: 860 REIEIPEAK 868
>sp|DPOL_BPSP2|DNA polymerase|Bacillus phage SP02 (Bacteriophage SP02)
Query: 3 VQLPEGR 9
VQLP GR
Sbjct: 523 VQLPSGR 529
51|SequenceR|260|251|YYILTREVQL
>sp|RDRP_IBDVU|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus
Query: 1 YYILTR 6
YYILTR
Sbjct: 434 YYILTR 439
>sp|RDRP_IBDVB|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus
Query: 1 YYILTR 6
YYILTR
Sbjct: 434 YYILTR 439
>sp|RDRP_IBDVA|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus
Query: 1 YYILTR 6
YYILTR
Sbjct: 433 YYILTR 438
>sp|RDRP_IBDV5|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus
Query: 1 YYILTR 6
YYILTR
Sbjct: 108 YYILTR 113
>sp|RDRP_IBDV|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus
Query: 1 YYILTR 6
YYILTR
Sbjct: 434 YYILTR 439
>sp|DPOL1_BPK32|DEPOLYMERASE 1, capsule K3-specific|Klebsiella phage KP32 (Bacteriophage KP32)
Query: 2 YILTREVQL 10
Y++TRE+ L
Sbjct: 344 YLITRELNL 352
>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)
Query: 1 YYILTREVQL 10
YY LTR+ ++
Sbjct: 2652 YYFLTRDPRI 2661
>sp|L_BDVV|RNA-DIRECTED RNA polymerase L|Borna disease virus (strain V)
Query: 1 YYILTREVQL 10
YY+L R+V L
Sbjct: 65 YYLLFRQVVL 74
>sp|L_BDV1|RNA-DIRECTED RNA polymerase L|Borna disease virus 1 (BoDV-1)
Query: 1 YYILTREVQL 10
YY+L R+V L
Sbjct: 65 YYLLFRQVVL 74
52|SequenceR|265|256|PIEDLYYILT
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 PIEDLYYILT 10
P+E LY++L+
Sbjct: 269 PVEQLYHVLS 278
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 1 PIEDLYYILT 10
P+E LY++L+
Sbjct: 269 PVEQLYHVLS 278
>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)
Query: 2 IEDLYYIL 9
+ED YYIL
Sbjct: 2334 VEDTYYIL 2341
>sp|DPOL1_BPK54|DEPOLYMERASE 1, capsule K8-specific|Klebsiella phage K5-4 (Bacteriophage K5-4)
Query: 1 PIEDLY 6
PIEDLY
Sbjct: 263 PIEDLY 268
>sp|POL_SIVVT|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate
Query: 1 PIEDLYYI 8
P ED+YY+
Sbjct: 1052 PKEDVYYV 1059
>sp|POL_SIVVG|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate
Query: 1 PIEDLYYI 8
P ED+YY+
Sbjct: 1049 PKEDVYYV 1056
>sp|POL_SIVV1|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate
Query: 1 PIEDLYYI 8
P ED+YY+
Sbjct: 1048 PGEDVYYV 1055
>sp|RSAMI_BPPM6|RADICAL SAM Nalpha-GlyT isomerase|Pseudomonas phage M6
Query: 1 PIEDLYY 7
PIED+Y+
Sbjct: 181 PIEDVYH 187
>sp|Y002_OSHVF|UNCHARACTERIZED protein ORF2|Ostreid herpesvirus 1 (isolate France)
Query: 2 IEDLYY 7
+EDLYY
Sbjct: 85 VEDLYY 90
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 2 IEDLYYIL 9
I+D+YY+L
Sbjct: 294 IDDVYYLL 301
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 2 IEDLYYIL 9
I+D+YY+L
Sbjct: 294 IDDVYYLL 301
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 2 IEDLYYIL 9
I+D+YY+L
Sbjct: 294 IDDVYYLL 301
>sp|POL_SIVV2|POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate
Query: 1 PIEDLYYI 8
P ED+YY+
Sbjct: 33 PGEDVYYV 40
>sp|Y093_AFV2P|UNCHARACTERIZED protein ORF93|Acidianus filamentous virus 2 (isolate
Query: 1 PIEDLYYILT 10
P+ DLY +LT
Sbjct: 53 PMSDLYRLLT 62
>sp|SIEB_LAMBD|SUPERINFECTION exclusion protein B|Escherichia phage lambda (Bacteriophage lambda)
Query: 1 PIEDLYY 7
PIED+Y+
Sbjct: 157 PIEDIYW 163
>sp|HELI_NPVAC|DNA replication helicase|Autographa californica nuclear polyhedrosis
Query: 1 PIEDLYY 7
PIE +YY
Sbjct: 1056 PIESMYY 1062
>sp|VP91_NPVEP|CAPSID-ASSOCIATED protein Vp91|Epiphyas postvittana nucleopolyhedrovirus (EppoMNPV)
Query: 1 PIEDLYYIL 9
P +DL+Y+L
Sbjct: 731 PAKDLHYVL 739
53|SequenceR|270|261|MSFKPPIEDL
>sp|L_EMARV|RNA-DIRECTED RNA polymerase L|European mountain ash ringspot-associated virus
Query: 2 SFKPPIEDL 10
S+K P+EDL
Sbjct: 1340 SYKSPLEDL 1348
>sp|TSP_BPSK2|MAJOR tail sheath protein|Serratia phage KSP20 (Serratia marcescens
Query: 5 PPIEDL 10
PP+EDL
Sbjct: 367 PPLEDL 372
>sp|VP4_ROTSS|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-SEM/G3P5B[2])
Query: 1 MSFKPPIE 8
M+F PP++
Sbjct: 72 MTFNPPVD 79
>sp|Y024_OSHVF|UNCHARACTERIZED protein ORF24|Ostreid herpesvirus 1 (isolate France)
Query: 1 MSFKPPI 7
MS++PP+
Sbjct: 288 MSYRPPV 294
>sp|YL310_MIMIV|UNCHARACTERIZED protein L310|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 FKPPIED 9
KPP+ED
Sbjct: 24 LKPPVED 30
54|SequenceR|275|266|ATLRKMSFKP
>sp|L_RYSV|RNA-DIRECTED RNA polymerase L|Rice yellow stunt virus (RYSV)
Query: 1 ATLRKMSFK 9
ATL++++FK
Sbjct: 1058 ATLKRLTFK 1066
55|SequenceR|280|271|VAILGATLRK
>sp|OBP_EHV1V|REPLICATION origin-binding protein|Equine herpesvirus 1 (strain V592)
Query: 1 VAILGATLR 9
VA+LGA LR
Sbjct: 621 VAVLGACLR 629
>sp|OBP_EHV1B|REPLICATION origin-binding protein|Equine herpesvirus 1 (strain Ab4p)
Query: 1 VAILGATLR 9
VA+LGA LR
Sbjct: 621 VAVLGACLR 629
>sp|DPOL_CEV01|DNA polymerase|Chrysochromulina ericina virus (CeV01)
Query: 1 VAILGATLRK 10
V I+G+T+R+
Sbjct: 404 VTIIGSTIRR 413
56|SequenceR|285|276|VVVVIVAILG
>sp|HEMA_I49A1|HEMAGGLUTININ A virus (strain A/Duck/Germany/1949
Query: 2 VVVIVAILG 10
VVVI+A+LG
Sbjct: 4 VVVIIALLG 12
>sp|HEMA_I49A0|HEMAGGLUTININ A virus (strain A/Chicken/Germany/n/1949
Query: 2 VVVIVAILG 10
VVVI+A+LG
Sbjct: 4 VVVIIALLG 12
>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain
Query: 1 VVVVIVAILG 10
+V+V+VA+LG
Sbjct: 1032 IVLVVVALLG 1041
>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 1 VVVVIVAILG 10
++VV+VA+LG
Sbjct: 1036 ILVVVVALLG 1045
>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate
Query: 1 VVVVIVAILG 10
++VV+VA+LG
Sbjct: 1036 ILVVVVALLG 1045
>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 1 VVVVIVAILG 10
++V++VA+LG
Sbjct: 1036 LLVIVVALLG 1045
57|SequenceR|290|281|AVLAVVVVVI
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 AVLAVVVVVI 10
A+LA+VVV++
Sbjct: 3125 AILAIVVVLV 3134
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 AVLAVVVVVI 10
A+LAV+VV++
Sbjct: 3037 AILAVIVVLV 3046
>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 1 AVLAVVVVVI 10
A+LAV+VV++
Sbjct: 3037 AILAVIVVLV 3046
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 AVLAVVVVVI 10
A+LA+VVV++
Sbjct: 3075 AILAIVVVLV 3084
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 AVLAVVVVVI 10
A+LA+VVV++
Sbjct: 3095 AILAIVVVLV 3104
>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)
Query: 1 AVLAVVVVVI 10
A+LAV+VV++
Sbjct: 3037 AILAVIVVLV 3046
>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 1 AVLAVVVVVI 10
A+LAV+VV++
Sbjct: 3037 AILAVIVVLV 3046
58|SequenceR|295|286|LVAMGAVLAV
>sp|YR873_MIMIV|PUTATIVE ankyrin repeat protein R873|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 LVAMGAVL 8
LV+MGAVL
Sbjct: 457 LVSMGAVL 464
59|SequenceR|300|291|RNTIVLVAMG
>sp|YL115_MIMIV|PUTATIVE helicase L115|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 RNTIVLVAMG 10
RNTIV+ MG
Sbjct: 953 RNTIVISTMG 962
60|SequenceR|305|296|KGSKRRNTIV
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 1 KGSKRRNTIV 10
KG+ +RN IV
Sbjct: 459 KGTPKRNCIV 468
>sp|VG55_ICHVA|UNCHARACTERIZED protein ORF55|Ictalurid herpesvirus 1 (strain Auburn)
Query: 2 GSKRRNTIV 10
GSK R TI+
Sbjct: 279 GSKHRETII 287
61|SequenceR|310|301|EVKKYKGSKR
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 1 EVKKYKGSK 9
E+K YKG K
Sbjct: 390 EIKNYKGIK 398
62|SequenceR|315|306|GLEKIEVKKY
>sp|NS1AB_TASV2|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 2 (TAstV-2)
Query: 2 LEKIEVKKY 10
LEKI+V+KY
Sbjct: 269 LEKIQVRKY 277
>sp|NS1A_TASV2|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 2 (TAstV-2)
Query: 2 LEKIEVKKY 10
LEKI+V+KY
Sbjct: 269 LEKIQVRKY 277
>sp|DARB_BPP1|DEFENSE against restriction protein B|Escherichia phage P1 (Bacteriophage
Query: 1 GLEKIEVKKY 10
G+EK+E K Y
Sbjct: 34 GVEKVEGKSY 43
>sp|P3_RDVA|OUTER capsid protein P3|Rice dwarf virus (isolate Akita)
Query: 3 EKIEVKKY 10
+KI+V+KY
Sbjct: 713 QKIDVRKY 720
>sp|YR624_MIMIV|PUTATIVE GTP-binding protein R624|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 LEKIEVKKY 10
LEKIE KY
Sbjct: 28 LEKIESSKY 36
>sp|VP5_FDVS|UNCHARACTERIZED protein VP5|Fiji disease virus (isolate Sugarcane)
Query: 1 GLEKIEVKK 9
GLEK+ V+K
Sbjct: 110 GLEKLHVRK 118
63|SequenceR|323|311|LSPEKRLEGLEKI
>sp|MATRX_LPMV|MATRIX protein|La Piedad-Michoacan-Mexico virus (LPMV)
Query: 2 SPEKRLEGLE 11
SPEK LEGL+
Sbjct: 102 SPEKILEGLD 111
>sp|APE_ASFP4|PROBABLE AP endonuclease|African swine fever virus (isolate
Query: 1 LSPEKRLEGLEKI 13
+ PE +EGL+KI
Sbjct: 119 VEPELIVEGLKKI 131
>sp|APE_ASFM2|PROBABLE AP endonuclease|African swine fever virus (isolate
Query: 1 LSPEKRLEGLEKI 13
+ PE +EGL+KI
Sbjct: 119 VEPELIVEGLKKI 131
>sp|ENV_SIVG1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.grivet
Query: 2 SPEKRLEGLEKI 13
SP + +GLEK+
Sbjct: 841 SPRRVRQGLEKV 852
>sp|APE_ASFWA|PROBABLE AP endonuclease|African swine fever virus (isolate
Query: 1 LSPEKRLEGLEKI 13
+ PE +EGL+KI
Sbjct: 119 VEPELIVEGLKKI 131
>sp|APE_ASFB7|PROBABLE AP endonuclease|African swine fever virus (strain
Query: 1 LSPEKRLEGLEKI 13
+ PE +EGL+KI
Sbjct: 119 VEPELIVEGLKKI 131
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 2 SPEKRLEGLEK 12
SP RL+ LEK
Sbjct: 1158 SPRSRLQQLEK 1168
>sp|APE_ASFK5|PROBABLE AP endonuclease|African swine fever virus (isolate
Query: 1 LSPEKRLEGLEKI 13
+ PE +EGL+KI
Sbjct: 119 VEPELIVEGLKKI 131
>sp|TRM1_SUHVF|TRIPARTITE terminase subunit 1|Suid herpesvirus 1 (strain Indiana-Funkhauser
Query: 2 SPEKRLEGL 10
SP++RLE L
Sbjct: 369 SPDERLEAL 377
>sp|ENV_SIVV1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet
Query: 1 LSPEKRLEGLE 11
L EK++EGLE
Sbjct: 650 LEWEKQIEGLE 660
>sp|Y061_OSHVF|UNCHARACTERIZED protein ORF61|Ostreid herpesvirus 1 (isolate France)
Query: 1 LSPEKRLEG 9
L+P KRL G
Sbjct: 167 LTPNKRLSG 175
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LSPEKRLEGL 10
LSP K LEG+
Sbjct: 917 LSPCKELEGV 926
>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)
Query: 1 LSPEKRLEGL 10
LSP K LEG+
Sbjct: 917 LSPCKELEGV 926
>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)
Query: 1 LSPEKRLEGL 10
LSP K LEG+
Sbjct: 917 LSPCKELEGV 926
>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN)
Query: 1 LSPEKRLEGL 10
LSP K LEG+
Sbjct: 917 LSPCKELEGV 926
>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT)
Query: 1 LSPEKRLEGL 10
LSP K LEG+
Sbjct: 917 LSPCKELEGV 926
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LSPEKRLEGL 10
LSP K LEG+
Sbjct: 917 LSPCKELEGV 926
>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)
Query: 1 LSPEKRLEGL 10
LSP K LEG+
Sbjct: 917 LSPCKELEGV 926
>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)
Query: 1 LSPEKRLEGL 10
LSP K LEG+
Sbjct: 917 LSPCKELEGV 926
>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN)
Query: 1 LSPEKRLEGL 10
LSP K LEG+
Sbjct: 917 LSPCKELEGV 926
>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT)
Query: 1 LSPEKRLEGL 10
LSP K LEG+
Sbjct: 917 LSPCKELEGV 926
>sp|L_CPSVP|RNA-DIRECTED RNA polymerase L|Citrus psorosis virus (isolate Spain/P-121)
Query: 1 LSPEKRLEGLEKI 13
L+P +L GLE I
Sbjct: 2029 LNPSDKLLGLENI 2041
>sp|L_SENDZ|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Z) (SeV)
Query: 2 SPEKRLEGLEK 12
S EKR EG+E
Sbjct: 616 SSEKRNEGMEN 626
>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)
Query: 2 SPEKRLEGLEK 12
S EKR EG++K
Sbjct: 616 SSEKRNEGMKK 626
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 1 LSPEKRLEGLEKI 13
L E LEGL+K+
Sbjct: 45 LQAELTLEGLDKM 57
>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)
Query: 2 SPEKRLEGLEK 12
S EKR EG++K
Sbjct: 616 SSEKRNEGMKK 626
>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)
Query: 2 SPEKRLEGLEK 12
S EKR EG++K
Sbjct: 616 SSEKRNEGMKK 626
>sp|Y050_SIFVH|UNCHARACTERIZED protein 50|Sulfolobus islandicus filamentous virus (isolate
Query: 5 KRLEGLEKI 13
K +EGLEKI
Sbjct: 43 KNVEGLEKI 51
THE END