SAA2_HUMAN Blast OutputR
Viruses
1|SequenceR|10|1|CFVLGTLLKM

>sp|RDRP_GRVMC|RNA-DIRECTED RNA polymerase|Groundnut rosette virus (strain MC1)

Query: 3 VLGTLLK 9
VLGTLLK
Sbjct: 168 VLGTLLK 174




2|SequenceR|15|6|SLVLSCFVLG

>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 3 VLSCFVL 9
VLSC+VL
Sbjct: 311 VLSCYVL 317


>sp|GFAT_MIMIV|PROBABLE glutamine--fructose-6-phosphate aminotransferase

Query: 5 SCFVLG 10
SCF+LG
Sbjct: 467 SCFILG 472


>sp|DPOL_ADEG1|DNA polymerase|Fowl adenovirus A serotype 1

Query: 4 LSCFVLG 10
++CFVLG
Sbjct: 845 IACFVLG 851


>sp|3608L_ASFM2|PROTEIN MGF 360-8L|African swine fever virus (isolate

Query: 1 SLVLSCFVLG 10
S + CFVLG
Sbjct: 246 STIYYCFVLG 255


>sp|SKI_AVIES|TRANSFORMING protein Ski|Avian erythroblastosis virus (strain Sloan-Kettering)

Query: 4 LSCFVLG 10
+SCFV+G
Sbjct: 72 ISCFVVG 78


>sp|36021_ASFP4|PROTEIN MGF 360-21R|African swine fever virus (isolate

Query: 1 SLVLSCFVLG 10
S + CFVLG
Sbjct: 253 STIYYCFVLG 262


>sp|36018_ASFP4|PROTEIN MGF 360-18R|African swine fever virus (isolate

Query: 1 SLVLSCFVLG 10
S + CFVLG
Sbjct: 253 STIYYCFVLG 262


>sp|3602L_ASFWA|PROTEIN MGF 360-2L|African swine fever virus (isolate

Query: 1 SLVLSCFVLG 10
S + CFVLG
Sbjct: 253 STIYYCFVLG 262


>sp|FUS_NDVTG|FUSION glycoprotein F0|Newcastle disease virus (strain Chicken/United

Query: 1 SLVLSCFVL 9
SLVL+C+++
Sbjct: 518 SLVLACYLM 526


>sp|FUS_NDVM|FUSION glycoprotein F0|Newcastle disease virus (strain Miyadera/51)

Query: 1 SLVLSCFVL 9
SLVL+C+++
Sbjct: 518 SLVLACYLM 526


>sp|FUS_NDVB|FUSION glycoprotein F0|Newcastle disease virus (strain Beaudette

Query: 1 SLVLSCFVL 9
SLVL+C+++
Sbjct: 518 SLVLACYLM 526


>sp|FUS_NDVI|FUSION glycoprotein F0|Newcastle disease virus (strain Italien/45)

Query: 1 SLVLSCFVL 9
SLVL+C+++
Sbjct: 518 SLVLACYLM 526


>sp|FUS_NDVA|FUSION glycoprotein F0|Newcastle disease virus (strain

Query: 1 SLVLSCFVL 9
SLVL+C+++
Sbjct: 518 SLVLACYLM 526


>sp|FUS_NDVH3|FUSION glycoprotein F0|Newcastle disease virus (strain Her/33)

Query: 1 SLVLSCFVL 9
SLVL+C+++
Sbjct: 518 SLVLACYLM 526


>sp|NS3A_IBVP3|NON-STRUCTURAL protein 3a|Avian infectious bronchitis virus (strain

Query: 1 SLVLSCFV 8
LVLSCF+
Sbjct: 18 KLVLSCFI 25


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 6 CFVLG 10
CFVLG
Sbjct: 1182 CFVLG 1186




3|SequenceR|20|11|SRSSVSLVLS

***** No hits found ******


4|SequenceR|25|16|LFSFFSRSSV

>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)

Query: 1 LFSFFSR 7
LF FFSR
Sbjct: 35 LFDFFSR 41


>sp|011L_IIV3|UNCHARACTERIZED protein 011L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 LFSFFSR 7
LFSFFS+
Sbjct: 678 LFSFFSK 684




5|SequenceR|30|21|DFAEGLFSFF

>sp|RDRP_OCSVU|RNA-DIRECTED RNA polymerase|Oat chlorotic stunt virus (isolate

Query: 2 FAEGLFSFF 10
F+EGLF +F
Sbjct: 561 FSEGLFEWF 569


>sp|POLG_PVCV1|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 1 DFAEGLFS 8
DFA+G FS
Sbjct: 1590 DFADGTFS 1597


>sp|POLG_PVCV2|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 1 DFAEGLFS 8
DFA+G FS
Sbjct: 1591 DFADGTFS 1598


>sp|RDRP_PMTVS|REPLICASE large subunit|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 3 AEGLFSFF 10
AEGL S+F
Sbjct: 406 AEGLISYF 413


>sp|VP1_RRSVT|STRUCTURAL protein VP1|Rice ragged stunt virus (isolate

Query: 1 DFAEGLFSF 9
DF GLF +
Sbjct: 1194 DFTRGLFDY 1202




6|SequenceR|35|26|MDRAGDFAEG

>sp|GLYCO_NCMV|GLYCOPROTEIN cereal mosaic virus (NCMV)

Query: 2 DRAGDFAEG 10
+R+G+F+EG
Sbjct: 416 ERSGNFSEG 424


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 5 GDFAEG 10
GDFAEG
Sbjct: 1852 GDFAEG 1857


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 5 GDFAEG 10
GDFAEG
Sbjct: 1852 GDFAEG 1857


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 5 GDFAEG 10
GDFAEG
Sbjct: 1853 GDFAEG 1858


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 5 GDFAEG 10
GDFAEG
Sbjct: 1779 GDFAEG 1784


>sp|POLN_AURAV|POLYPROTEIN P1234|Aura virus (AURAV)

Query: 5 GDFAEG 10
GDFAEG
Sbjct: 1846 GDFAEG 1851


>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 1 MDRAGDFAEG 10
+DR G FA+G
Sbjct: 1369 VDRLGTFAKG 1378


>sp|VG83_BPML5|GENE 83 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 3 RAGDFA 8
RAGDFA
Sbjct: 15 RAGDFA 20


>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum

Query: 2 DRAGDFAEG 10
D+ GD AEG
Sbjct: 2829 DQTGDKAEG 2837




7|SequenceR|40|31|SYARWMDRAG

>sp|MCP_PPV01|MAJOR capsid protein|Phaeocystis pouchetii virus (PpV01)

Query: 2 YARWMDRAG 10
YARW+D G
Sbjct: 89 YARWLDFPG 97


>sp|MCP_CEV01|MAJOR capsid protein|Chrysochromulina ericina virus (CeV01)

Query: 2 YARWMDRAG 10
+ARW+D G
Sbjct: 114 FARWLDFPG 122


>sp|STRU2_BPPAJ|STRUCTURAL protein 2|Pseudomonas phage PAJU2

Query: 4 RWMDRA 9
RWMDR
Sbjct: 36 RWMDRG 41


>sp|P32K_ADEO7|STRUCTURAL protein p32K|Ovine adenovirus D serotype 7

Query: 1 SYARWM 6
SYARW+
Sbjct: 66 SYARWI 71


>sp|HELI1_HVAVE|PUTATIVE ATP-dependent RNA helicase|Heliothis virescens ascovirus 3e

Query: 2 YARWMD 7
YA WMD
Sbjct: 356 YATWMD 361


>sp|1106L_ASFK5|PROTEIN MGF 110-6L|African swine fever virus (isolate

Query: 1 SYARWMDR 8
S +RWMD+
Sbjct: 79 SVSRWMDK 86


>sp|PRIM_BPP4|PUTATIVE P4-specific DNA primase|Enterobacteria phage P4 (Bacteriophage P4)

Query: 4 RWMDRA 9
RW+DRA
Sbjct: 463 RWLDRA 468


>sp|DPOL_SFAVA|DNA polymerase|Spodoptera frugiperda ascovirus 1a (SfAV-1a)

Query: 2 YARWMDRAG 10
Y RW D G
Sbjct: 592 YIRWEDHVG 600


>sp|TEG1_GAHVM|TEGUMENT protein UL46 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 YARWMD 7
YARW++
Sbjct: 329 YARWLE 334


>sp|PAP_PSHV1|DNA polymerase processivity factor|Psittacid herpesvirus 1 (isolate

Query: 3 ARWMDR 8
A+WMDR
Sbjct: 242 AQWMDR 247


>sp|MCAPS_TYYVF|READTHROUGH protein P3-RTD|Turnip yellows virus (isolate FL-1)

Query: 1 SYARWMDR 8
SY W DR
Sbjct: 409 SYGAWTDR 416


>sp|MCAPS_BWYVG|READTHROUGH protein P3-RTD|Beet western yellows virus (isolate

Query: 1 SYARWMDR 8
SY W DR
Sbjct: 408 SYGAWTDR 415




8|SequenceR|45|36|AERMDSYARW

>sp|P32K_ADEO7|STRUCTURAL protein p32K|Ovine adenovirus D serotype 7

Query: 4 MDSYARW 10
+ SYARW
Sbjct: 64 ISSYARW 70


>sp|S3_DPIRV|UNCHARACTERIZED protein S3|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)

Query: 2 ERMDSYARW 10
ER+ +Y+ W
Sbjct: 102 ERLSNYSSW 110


>sp|S3BIS_DPIRV|UNCHARACTERIZED protein S3bis|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)

Query: 2 ERMDSYARW 10
ER+ +Y+ W
Sbjct: 102 ERLSNYSSW 110


Query: 2 ERMDSYARW 10
ER+ +Y+ W
Sbjct: 452 ERLSNYSSW 460


Query: 2 ERMDSYARW 10
ER+ +Y+ W
Sbjct: 802 ERLSNYSSW 810




9|SequenceR|50|41|SGIYNAERMD

>sp|VG42_BPML5|GENE 42 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 2 GIYNAERMD 10
G+Y AER D
Sbjct: 38 GVYTAERPD 46


>sp|YR571_MIMIV|UNCHARACTERIZED protein R571|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GIYNAERMD 10
G+YNA++++
Sbjct: 99 GMYNADKLE 107


>sp|NSP3_ROTBS|NON-STRUCTURAL protein 3|Rotavirus C (isolate

Query: 1 SGIYNA 6
SGIYNA
Sbjct: 54 SGIYNA 59




10|SequenceR|55|46|HFYKDSGIYN

>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)

Query: 3 YKDSGIYN 10
Y D+GI+N
Sbjct: 397 YSDTGIFN 404


>sp|GP_PHV|ENVELOPMENT polyprotein|Prospect Hill virus (PHV)

Query: 3 YKDSGIYN 10
Y D+GI+N
Sbjct: 398 YSDTGIFN 405


>sp|NP_ADES1|PRE-HISTONE-LIKE nucleoprotein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 HFYKDSG 7
H+++DSG
Sbjct: 37 HYFRDSG 43


>sp|NSP3_ROTBS|NON-STRUCTURAL protein 3|Rotavirus C (isolate

Query: 5 DSGIYN 10
DSGIYN
Sbjct: 53 DSGIYN 58


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 1 HFYKDSGIY 9
HFY++ G++
Sbjct: 201 HFYQERGVF 209


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 1 HFYKDSGIY 9
HFY++ G++
Sbjct: 201 HFYQERGVF 209


>sp|CAPSH_BPAR1|MAJOR capsid protein|Escherichia phage AR1 (Bacteriophage AR1)

Query: 1 HFYKDSG 7
HF++D+G
Sbjct: 180 HFFQDTG 186


>sp|GE_EHV4|ENVELOPE glycoprotein E|Equine herpesvirus 4 (strain 1942)

Query: 1 HFYKDSG 7
HFY D G
Sbjct: 81 HFYTDHG 87


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 2 FYKDSGIY 9
FYK G+Y
Sbjct: 872 FYKKDGVY 879


>sp|TEG7_HHV6Z|TEGUMENT protein UL51 homolog|Human herpesvirus 6B (strain Z29)

Query: 3 YKDSGIY 9
YKD G+Y
Sbjct: 49 YKDFGVY 55


>sp|TEG7_HHV6U|TEGUMENT protein UL51 homolog|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 YKDSGIY 9
YKD G+Y
Sbjct: 41 YKDFGVY 47


>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)

Query: 1 HFYKDSGIY 9
H KD G+Y
Sbjct: 494 HLNKDDGMY 502


>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 1 HFYKDSGIY 9
H KD G+Y
Sbjct: 494 HLNKDDGMY 502


>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann

Query: 1 HFYKDSGIY 9
H KD G+Y
Sbjct: 494 HLNKDDGMY 502


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2 FYKDSGIY 9
FYK G+Y
Sbjct: 872 FYKKDGVY 879


>sp|VF282_IIV6|PUTATIVE transcription factor 282R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 FYKDSGIY 9
FYKD IY
Sbjct: 163 FYKDDDIY 170


>sp|463L_IIV6|PROBABLE lipid hydrolase 463L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 HFYKDSGIYN 10
+FY D G++N
Sbjct: 190 NFYIDGGVWN 199


>sp|UL97_ELHVK|PHOSPHOTRANSFERASE UL97 homolog|Elephantid herpesvirus 1 (isolate Asian

Query: 2 FYKDSGI 8
FYK SGI
Sbjct: 435 FYKQSGI 441


>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)

Query: 2 FYKDSGIYN 10
FY +G YN
Sbjct: 534 FYASNGTYN 542




11|SequenceR|60|51|YNGRAHFYKD

>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13

Query: 3 GRAHFYKD 10
GR HF+KD
Sbjct: 317 GRVHFFKD 324


>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7

Query: 3 GRAHFYKD 10
GR HF+KD
Sbjct: 318 GRVHFFKD 325


>sp|VL2_HPV55|MINOR capsid protein L2|Human papillomavirus type 55

Query: 3 GRAHFYKD 10
GR HFY+D
Sbjct: 316 GRIHFYQD 323


>sp|VL2_HPV44|MINOR capsid protein L2|Human papillomavirus 44

Query: 3 GRAHFYKD 10
GR HFY+D
Sbjct: 316 GRIHFYQD 323


>sp|HEMA_I66A0|HEMAGGLUTININ A virus (strain A/Turkey/Ontario/7732/1966

Query: 1 YNGRAHFYKD 10
YNGR+ FY++
Sbjct: 153 YNGRSSFYRN 162


>sp|VL2_PCPV1|MINOR capsid protein L2|Pygmy chimpanzee papillomavirus type 1

Query: 3 GRAHFYKD 10
GR HFY D
Sbjct: 319 GRVHFYTD 326


>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45

Query: 3 GRAHFYKD 10
GR HFY D
Sbjct: 315 GRVHFYHD 322


>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34

Query: 3 GRAHFYKD 10
GR HFY D
Sbjct: 324 GRVHFYHD 331


>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40

Query: 3 GRAHFYKD 10
GR HF++D
Sbjct: 318 GRVHFFRD 325


>sp|HEMA_I83A4|HEMAGGLUTININ A virus (strain A/Turkey/Ireland/1378/1983

Query: 1 YNGRAHFYKD 10
YNGR+ F+++
Sbjct: 153 YNGRSSFFRN 162


>sp|HEMA_I83A3|HEMAGGLUTININ A virus (strain A/Duck/Ireland/113/1983

Query: 1 YNGRAHFYKD 10
YNGR+ F+++
Sbjct: 153 YNGRSSFFRN 162


>sp|HEMA_I87A1|HEMAGGLUTININ A virus (strain A/Mallard/Ohio/556/1987

Query: 1 YNGRAHFYKD 10
YNGR+ F+++
Sbjct: 153 YNGRSSFFRN 162


>sp|HEMA_I61A0|HEMAGGLUTININ A virus (strain A/Tern/South

Query: 1 YNGRAHFYKD 10
YNGR+ F+++
Sbjct: 153 YNGRSSFFRN 162


>sp|PRIM_SUHVK|DNA primase|Suid herpesvirus 1 (strain Kaplan)

Query: 1 YNGRAHFY 8
+NGRAH Y
Sbjct: 860 FNGRAHEY 867


>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2

Query: 1 YNGRAHFYKD 10
Y GRAH + D
Sbjct: 615 YPGRAHTFDD 624


>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43

Query: 3 GRAHFYKD 10
GR HF+ D
Sbjct: 319 GRVHFFTD 326


>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006

Query: 1 YNGRAHFYKD 10
+NG++ FYK+
Sbjct: 154 HNGKSSFYKN 163


>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996

Query: 1 YNGRAHFYKD 10
+NG++ FYK+
Sbjct: 155 HNGKSSFYKN 164


>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24

Query: 3 GRAHFYKD 10
+ HFYKD
Sbjct: 357 AQVHFYKD 364


>sp|PVA_BPCA1|PORTAL vertex auxiliary protein|Bacteroides phage crAss001 (Bacteroides

Query: 1 YNGRAHFYK 9
YNG ++ YK
Sbjct: 68 YNGSSYLYK 76


>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 1 YNGRAHFYKD 10
Y GRA++Y +
Sbjct: 1549 YTGRAYWYAN 1558


>sp|CPRT_PMTVS|91 kDa readthrough protein|Potato mop-top virus (isolate

Query: 3 GRAHFY 8
GR HFY
Sbjct: 67 GRTHFY 72


>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 YNGRAHFYKD 10
YNG++ F+++
Sbjct: 153 YNGKSSFFRN 162


>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 YNGRAHFYKD 10
YNG++ F+++
Sbjct: 153 YNGKSSFFRN 162


>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky

Query: 1 YNGRAHFYKD 10
YNG++ F+++
Sbjct: 153 YNGKSSFFRN 162


>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62

Query: 3 GRAHFYKD 10
R HFY D
Sbjct: 319 ARVHFYHD 326


>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61

Query: 3 GRAHFYKD 10
R HFY D
Sbjct: 313 ARVHFYHD 320


>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57

Query: 3 GRAHFYKD 10
R HFY D
Sbjct: 318 ARVHFYHD 325


>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a

Query: 3 GRAHFYKD 10
R HFY D
Sbjct: 317 ARVHFYHD 324


>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27

Query: 3 GRAHFYKD 10
R HFY D
Sbjct: 316 ARVHFYHD 323


>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18

Query: 3 GRAHFYKD 10
R HFY D
Sbjct: 315 ARVHFYHD 322


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 1 YNGRAHFYKD 10
Y+G +HF +D
Sbjct: 764 YDGWSHFTQD 773


>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23

Query: 4 RAHFYKD 10
R HFY D
Sbjct: 357 RVHFYTD 363


>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea

Query: 1 YNGRAHFYKD 10
YNG++ F+++
Sbjct: 151 YNGKSSFFRN 160


>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996

Query: 1 YNGRAHFYKD 10
+NG++ FY++
Sbjct: 154 HNGKSSFYRN 163


>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New

Query: 1 YNGRAHFYKD 10
+NG++ FY++
Sbjct: 154 HNGKSSFYRN 163


>sp|RDRP_BPGA|RNA-DIRECTED RNA polymerase beta chain|Enterobacteria phage GA (Bacteriophage

Query: 5 AHFYKD 10
AHF+KD
Sbjct: 383 AHFFKD 388


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 1 YNGRAHFYK 9
YN HF+K
Sbjct: 1181 YNSEFHFHK 1189


>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996

Query: 1 YNGRAHFYKD 10
Y+GR+ F+++
Sbjct: 153 YHGRSSFFRN 162


>sp|CAPSD_PMTVS|CAPSID protein|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 3 GRAHFY 8
GR HFY
Sbjct: 67 GRTHFY 72


>sp|REPA_BPPHS|REPLICATION-ASSOCIATED protein A|Enterobacteria phage phiX174 (Isolate Sanger)

Query: 2 NGRAHFY 8
NGR HF+
Sbjct: 259 NGRLHFH 265


>sp|VPG_BEFVB|PROTEIN gamma|Bovine ephemeral fever virus (strain

Query: 6 HFYKD 10
HFYKD
Sbjct: 100 HFYKD 104


>sp|VGA_BPS13|A' protein|Enterobacteria phage S13 (Bacteriophage S13)

Query: 2 NGRAHFY 8
NGR HF+
Sbjct: 268 NGRLHFH 274


>sp|1108L_ASFWA|PROTEIN MGF 110-8L|African swine fever virus (isolate

Query: 1 YNGRAHFYK 9
+NG+ H+Y+
Sbjct: 82 WNGQCHYYE 90




12|SequenceR|65|56|RKAADYNGRA

>sp|V026_FOWPN|PUTATIVE ankyrin repeat protein FPV026|Fowlpox virus (strain NVSL) (FPV)

Query: 4 ADYNGR 9
ADYNGR
Sbjct: 198 ADYNGR 203


>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)

Query: 1 RKAADYNGR 9
R A DYNG+
Sbjct: 295 RPATDYNGQ 303


>sp|ENV_EIAVY|ENVELOPE glycoprotein|Equine infectious anemia virus (strain

Query: 1 RKAADYNGRA 10
RK DY GRA
Sbjct: 836 RKMLDYIGRA 845


>sp|ENV_EIAVW|ENVELOPE glycoprotein|Equine infectious anemia virus (strain

Query: 1 RKAADYNGRA 10
RK DY GRA
Sbjct: 836 RKMLDYIGRA 845


>sp|ENV_EIAVC|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 1 RKAADYNGRA 10
RK DY GRA
Sbjct: 836 RKMLDYIGRA 845


>sp|ENV_EIAV9|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 1 RKAADYNGRA 10
RK DY GRA
Sbjct: 836 RKMLDYIGRA 845


>sp|ENV_EIAV5|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 1 RKAADYNGRA 10
RK DY GRA
Sbjct: 837 RKMLDYIGRA 846


>sp|ENV_EIAV3|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 1 RKAADYNGRA 10
RK DY GRA
Sbjct: 836 RKMLDYIGRA 845


>sp|ENV_EIAV2|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 1 RKAADYNGRA 10
RK DY GRA
Sbjct: 836 RKMLDYIGRA 845


>sp|ENV_EIAV1|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 1 RKAADYNGRA 10
RK DY GRA
Sbjct: 836 RKMLDYIGRA 845


>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United

Query: 1 RKAADYNGR 9
R A DYNG+
Sbjct: 296 RPATDYNGQ 304


>sp|POL_COYMV|POLYPROTEIN P3|Commelina yellow mottle virus (CoYMV)

Query: 1 RKAADYNGRA 10
RKA Y G+A
Sbjct: 854 RKATKYTGKA 863


>sp|420R_IIV6|PUTATIVE MSV199 domain-containing protein 420R|Invertebrate iridescent virus

Query: 4 ADYNGRA 10
+DYNGR+
Sbjct: 264 SDYNGRS 270




13|SequenceR|70|61|AGGPGRKAAD

>sp|POL_SIVM1|GAG-POL polyprotein|Simian immunodeficiency virus (isolate Mm142-83)

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 355 GGPGQKA 361


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 351 GGPGQKA 357


>sp|POL_SIVSP|GAG-POL polyprotein|Simian immunodeficiency virus (isolate PBj14/BCL-3)

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 356 GGPGQKA 362


>sp|POL_SIVM2|GAG-POL polyprotein|Simian immunodeficiency virus (isolate Mm251)

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 355 GGPGQKA 361


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 351 GGPGQKA 357


>sp|POL_SIVS4|GAG-POL polyprotein|Simian immunodeficiency virus (isolate F236/smH4)

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 356 GGPGQKA 362


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 356 GGPGQKA 362


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 355 GGPGQKA 361


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 356 GGPGQKA 362


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 357 GGPGQKA 363


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 351 GGPGQKA 357


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 356 GGPGQKA 362


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2 GGPGRK 7
GGPG+K
Sbjct: 403 GGPGKK 408


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 356 GGPGQKA 362


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 354 GGPGQKA 360


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 356 GGPGQKA 362


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 350 GGPGHKA 356


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 350 GGPGHKA 356


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 356 GGPGHKA 362


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 352 GGPGHKA 358


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 351 GGPGHKA 357


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 350 GGPGHKA 356


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|VE2_BPV6|REGULATORY protein E2|Bos taurus papillomavirus 6 (Bovine

Query: 2 GGPGRK 7
GGPGR+
Sbjct: 211 GGPGRR 216


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 357 GGPGHKA 363


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 1 AGGPGRKA 8
AGGPGR A
Sbjct: 1005 AGGPGRPA 1012


>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|GAG_SIVM1|GAG polyprotein|Simian immunodeficiency virus (isolate Mm142-83)

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 355 GGPGQKA 361


>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 354 GGPGQKA 360


>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 356 GGPGQKA 362


>sp|GAG_SIVSP|GAG polyprotein|Simian immunodeficiency virus (isolate PBj14/BCL-3)

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 356 GGPGQKA 362


>sp|POLS_ABPVR|STRUCTURAL polyprotein|Acute bee paralysis virus (strain

Query: 1 AGGPGRKAAD 10
AGG G+K A+
Sbjct: 114 AGGKGQKLAN 123


>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 356 GGPGQKA 362


>sp|GAG_SIVS4|GAG polyprotein|Simian immunodeficiency virus (isolate F236/smH4)

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 356 GGPGQKA 362


>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 355 GGPGQKA 361


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 2 GGPGRKAA 9
GGPGR A
Sbjct: 6 GGPGRNRA 13


>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 350 GGPGHKA 356


>sp|GAG_SIVM2|GAG polyprotein|Simian immunodeficiency virus (isolate Mm251)

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 355 GGPGQKA 361


>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 352 GGPGHKA 358


>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 356 GGPGQKA 362


>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 356 GGPGHKA 362


>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 356 GGPGQKA 362


>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1 AGGPGRKA 8
GGPG+KA
Sbjct: 356 VGGPGQKA 363


>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1 AGGPGRKA 8
GGPG+KA
Sbjct: 355 VGGPGQKA 362


>sp|GAG_SIVMS|GAG polyprotein|Simian immunodeficiency virus (isolate STM)

Query: 2 GGPGRKA 8
GGPG+KA
Sbjct: 356 GGPGQKA 362


>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 357 GGPGHKA 363


>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360


>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 GGPGRKA 8
GGPG KA
Sbjct: 354 GGPGHKA 360




14|SequenceR|75|66|VEAAWAGGPG

>sp|NEF_SIVVT|PROTEIN Nef|Simian immunodeficiency virus agm.vervet (isolate

Query: 4 AWAGGPG 10
AW+ GPG
Sbjct: 145 AWSKGPG 151


>sp|NEF_SIVVG|PROTEIN Nef|Simian immunodeficiency virus agm.vervet (isolate

Query: 4 AWAGGPG 10
AW+ GPG
Sbjct: 145 AWSEGPG 151


>sp|NEF_SIVV1|PROTEIN Nef|Simian immunodeficiency virus agm.vervet (isolate

Query: 4 AWAGGPG 10
AW+ GPG
Sbjct: 145 AWSKGPG 151


>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31

Query: 5 WAGGPG 10
+AGGPG
Sbjct: 136 YAGGPG 141


>sp|RDRP_SCVLA|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-A

Query: 3 AAWAGGPG 10
A W G PG
Sbjct: 902 AIWVGEPG 909


>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)

Query: 3 AAWAGG 8
AAW GG
Sbjct: 539 AAWTGG 544


>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 AAWAGG 8
AAW GG
Sbjct: 539 AAWTGG 544


>sp|P19_TBSVA|RNA silencing suppressor p19|Tomato bushy stunt virus (strain

Query: 5 WAGGPG 10
W GGPG
Sbjct: 19 WNGGPG 24


>sp|P19_TBSV8|RNA silencing suppressor p19|Tomato bushy stunt virus (strain

Query: 5 WAGGPG 10
W GGPG
Sbjct: 19 WNGGPG 24


>sp|EXRN_BPT7|EXONUCLEASE phage T7 (Bacteriophage T7)

Query: 2 EAAWAGGP 9
+ AWAG P
Sbjct: 72 KKAWAGAP 79




15|SequenceR|80|71|RANSIVEAAW

***** No hits found ******


16|SequenceR|85|76|RQINERANSI

***** No hits found ******


17|SequenceR|90|81|GRGTLRQINE

>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5

Query: 1 GRGTLRQINE 10
G+ T+R++NE
Sbjct: 134 GKRTVRRLNE 143


>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2

Query: 1 GRGTLRQINE 10
G+ T+R++NE
Sbjct: 134 GKRTVRRLNE 143




18|SequenceR|95|86|LSDEAGRGTL

>sp|VP8_HAPV1|VIRION protein 8|Halorubrum pleomorphic virus 1 (HRPV-1)

Query: 1 LSDEAGRGTL 10
L+DEA RG+L
Sbjct: 56 LADEADRGSL 65


>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P

Query: 1 LSDEAGRGTL 10
L D GRGTL
Sbjct: 354 LCDITGRGTL 363


>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 DEAGRGTL 10
+EAGRG++
Sbjct: 113 EEAGRGSM 120


>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 DEAGRGTL 10
+EAGRG++
Sbjct: 113 EEAGRGSM 120


>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 DEAGRGTL 10
+EAGRG++
Sbjct: 113 EEAGRGSM 120


>sp|HOLIN_BPKMV|HOLIN phage phiKMV

Query: 2 SDEAGRGTL 10
+ EAG+GTL
Sbjct: 6 ATEAGKGTL 14




19|SequenceR|100|91|AAQDALSDEA

>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 1 AAQDALSDEA 10
AA+ ALSDEA
Sbjct: 1247 AARKALSDEA 1256


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 1 AAQDALSDEA 10
AA+ ALSDEA
Sbjct: 1246 AARKALSDEA 1255


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 1 AAQDALSDEA 10
AA+ ALSDEA
Sbjct: 1246 AARKALSDEA 1255




20|SequenceR|105|96|RGWKNAAQDA

>sp|VP2_BTV10|OUTER capsid protein VP2|Bluetongue virus 10 (isolate USA)

Query: 3 WKNAAQD 9
WKNAA D
Sbjct: 264 WKNAAYD 270


>sp|ENV_IPMAE|ENVELOPE glycoprotein|Mouse intracisternal a-particle MIAE (IAP-MIAE)

Query: 1 RGWKNAAQD 9
RGW + QD
Sbjct: 111 RGWVSTTQD 119




21|SequenceR|110|101|PDRGSRGWKN

>sp|NSP1_ROTPC|NON-STRUCTURAL protein 1|Rotavirus C (strain RVC/Pig/United States/Cowden/1980)

Query: 2 DRGSRGWK 9
D+ RGWK
Sbjct: 229 DKNDRGWK 236


>sp|OBP_EHV1V|REPLICATION origin-binding protein|Equine herpesvirus 1 (strain V592)

Query: 1 PDRGSRG 7
PD GSRG
Sbjct: 11 PDEGSRG 17


>sp|OBP_EHV1B|REPLICATION origin-binding protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 PDRGSRG 7
PD GSRG
Sbjct: 11 PDEGSRG 17


>sp|HELI_PSHV1|DNA replication helicase|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 DRGSRGWK 9
DRG+R W+
Sbjct: 4 DRGTRLWQ 11


>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)

Query: 2 DRGSRGWK 9
DRG+ WK
Sbjct: 344 DRGTMDWK 351


>sp|CAPSD_GLVWB|MAJOR capsid protein|Giardia lamblia virus (isolate Wang)

Query: 4 GSRGW 8
GSRGW
Sbjct: 201 GSRGW 205


>sp|CAPSD_FCVC6|CAPSID protein VP1|Feline calicivirus (strain CFI/68 FIV)

Query: 1 PDRGSRG 7
P+RG+RG
Sbjct: 554 PERGARG 560


>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi

Query: 2 DRGSRGWKN 10
D+ RGW N
Sbjct: 95 DQSDRGWGN 103


>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)

Query: 2 DRGSRGWKN 10
D+ RGW N
Sbjct: 95 DQSDRGWGN 103


>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)

Query: 2 DRGSRGWK 9
DRG+ WK
Sbjct: 344 DRGNMDWK 351


>sp|VP3_ROTP5|PROTEIN VP3|Rotavirus A (strain RVA/Pig/United States/OSU/1977/G5P9[7])

Query: 2 DRGSRGWK 9
DRG+ WK
Sbjct: 344 DRGNMDWK 351


>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])

Query: 2 DRGSRGWK 9
DRG+ WK
Sbjct: 344 DRGNMDWK 351


>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)

Query: 2 DRGSRGWK 9
DRG+ WK
Sbjct: 344 DRGNMDWK 351


>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])

Query: 2 DRGSRGWK 9
DRG+ WK
Sbjct: 344 DRGNMDWK 351


>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])

Query: 2 DRGSRGWK 9
DRG+ WK
Sbjct: 344 DRGNMDWK 351


>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])

Query: 2 DRGSRGWK 9
DRG+ WK
Sbjct: 344 DRGNMDWK 351


>sp|VP3_ROTSH|PROTEIN VP3|Rotavirus A (isolate RVA/Monkey/South

Query: 2 DRGSRGWK 9
DRG+ WK
Sbjct: 344 DRGNADWK 351


>sp|VP3_ROTS1|PROTEIN VP3|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)

Query: 2 DRGSRGWK 9
DRG+ WK
Sbjct: 344 DRGNADWK 351


>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB

Query: 2 DRGSRGWKN 10
D+ RGW N
Sbjct: 95 DQSDRGWGN 103


>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep

Query: 2 DRGSRGWKN 10
D+ RGW N
Sbjct: 95 DQSDRGWGN 103


>sp|NCAP_PTPV|NUCLEOPROTEIN toro phlebovirus

Query: 2 DRGSRGWK 9
DRG WK
Sbjct: 43 DRGGEDWK 50


>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 4 GSRGW 8
GSRGW
Sbjct: 201 GSRGW 205


>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)

Query: 2 DRGSRGWKN 10
D+ RGW N
Sbjct: 375 DQSDRGWGN 383


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5 SRGWKN 10
S+GWKN
Sbjct: 3185 SKGWKN 3190


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5 SRGWKN 10
S+GWKN
Sbjct: 3185 SKGWKN 3190


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5 SRGWKN 10
S+GWKN
Sbjct: 3185 SKGWKN 3190


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5 SRGWKN 10
S+GWKN
Sbjct: 3185 SKGWKN 3190


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5 SRGWKN 10
S+GWKN
Sbjct: 3185 SKGWKN 3190


>sp|RDRP_PMV|RNA replication protein|Papaya mosaic potexvirus (PMV)

Query: 4 GSRGWKN 10
SRGW N
Sbjct: 576 ASRGWPN 582


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 2 DRGSRGW 8
DRG+ GW
Sbjct: 1059 DRGATGW 1065


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 2 DRGSRGW 8
DRG+ GW
Sbjct: 1059 DRGATGW 1065


>sp|YR705_MIMIV|UNCHARACTERIZED protein R705|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PDRGSRGW 8
P+RG RG+
Sbjct: 71 PERGGRGY 78


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 2 DRGSRGWKN 10
D+ RGW N
Sbjct: 375 DQSDRGWGN 383


>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12

Query: 1 PDRGSRGW 8
P++G R W
Sbjct: 341 PEKGVRSW 348


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 2 DRGSRGWKN 10
D+ RGW N
Sbjct: 375 DQSDRGWGN 383


>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 1 PDRGSRGW 8
PDR GW
Sbjct: 1027 PDRRLEGW 1034


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 2 DRGSRGWKN 10
D+ RGW N
Sbjct: 375 DQSDRGWGN 383


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 2 DRGSRGWKN 10
D+ RGW N
Sbjct: 375 DQSDRGWGN 383


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 2 DRGSRGWKN 10
D+ RGW N
Sbjct: 375 DQSDRGWGN 383


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 2 DRGSRGWKN 10
D+ RGW N
Sbjct: 375 DQSDRGWGN 383


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 2 DRGSRGWKN 10
D+ RGW N
Sbjct: 376 DQSDRGWGN 384


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 2 DRGSRGWKN 10
D+ RGW N
Sbjct: 375 DQSDRGWGN 383


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 2 DRGSRGWKN 10
D+ RGW N
Sbjct: 376 DQSDRGWGN 384


>sp|COLL2_MIMIV|COLLAGEN-LIKE protein 2|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 DRGSRGWK 9
D+GS+G+K
Sbjct: 810 DKGSKGYK 817


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 2 DRGSRGWKN 10
D+ RGW N
Sbjct: 373 DQSDRGWGN 381




22|SequenceR|115|106|PRFHNPDRGS

>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)

Query: 2 RFHNPDRGS 10
RFHNPD S
Sbjct: 67 RFHNPDLSS 75


>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 RFHNPDRGS 10
RFHNPD S
Sbjct: 67 RFHNPDLSS 75


>sp|CAPSD_BP44A|MAJOR capsid protein|Staphylococcus phage 44AHJD

Query: 1 PRFHNPD 7
P FHNP+
Sbjct: 362 PPFHNPE 368


>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 1 PRFHNPDRGS 10
PR HNP + +
Sbjct: 456 PRMHNPTQSA 465


>sp|VNS1_BTV2A|NON-STRUCTURAL protein NS1|Bluetongue virus 2 (isolate USA)

Query: 3 FHNPD 7
FHNPD
Sbjct: 170 FHNPD 174


>sp|NEC1_EHV1B|NUCLEAR egress protein 1|Equine herpesvirus 1 (strain Ab4p)

Query: 1 PRFHNPDRGS 10
PR H DR +
Sbjct: 140 PRLHRADRAA 149


>sp|VE6_HPV39|PROTEIN E6|Human papillomavirus 39

Query: 2 RFHNP 6
RFHNP
Sbjct: 3 RFHNP 7


>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 2 RFHNPD 7
RF+NPD
Sbjct: 207 RFYNPD 212


>sp|UNG_SHV21|URACIL-DNA glycosylase|Saimiriine herpesvirus 2 (strain 11)

Query: 1 PRFHNPDRG 9
P FH P+ G
Sbjct: 123 PLFHAPNHG 131


>sp|YR188_MIMIV|UNCHARACTERIZED protein R188|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PRFHNP 6
P+FH+P
Sbjct: 399 PKFHDP 404


>sp|ST_POVBO|SMALL t antigen|Bovine polyomavirus (BPyV) (Bos taurus

Query: 2 RFHNPDRG 9
+ H+PD+G
Sbjct: 35 KVHHPDKG 42


>sp|LT_POVBO|LARGE T antigen|Bovine polyomavirus (BPyV) (Bos taurus

Query: 2 RFHNPDRG 9
+ H+PD+G
Sbjct: 35 KVHHPDKG 42


>sp|LTP_PSHV1|LARGE tegument protein deneddylase|Psittacid herpesvirus 1 (isolate

Query: 4 HNPDRGS 10
H PDRG+
Sbjct: 480 HRPDRGA 486


>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66

Query: 1 PRFHNPDR 8
P F+NPD+
Sbjct: 87 PSFYNPDQ 94


>sp|LT_POVHA|LARGE T antigen|Hamster polyomavirus (HaPyV) (Mesocricetus auratus

Query: 3 FHNPDRG 9
F+NPD G
Sbjct: 91 FYNPDTG 97


>sp|H962R_ASFB7|PUTATIVE primase C962R|African swine fever virus (strain

Query: 4 HNPDRGS 10
HNPD G+
Sbjct: 764 HNPDPGN 770


>sp|POL_MPMV|GAG-PRO-POL polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian

Query: 2 RFHNPD 7
++HNPD
Sbjct: 189 KYHNPD 194


>sp|POL_SRV2|GAG-PRO-POL polyprotein|Simian retrovirus SRV-2

Query: 2 RFHNPD 7
++HNPD
Sbjct: 187 KYHNPD 192


>sp|POL_SRV1|GAG-PRO-POL polyprotein|Simian retrovirus SRV-1

Query: 2 RFHNPD 7
++HNPD
Sbjct: 190 KYHNPD 195




23|SequenceR|122|111|YKEPLGAPRFHN

>sp|P14_PBCV1|MINOR capsid protein P14|Paramecium bursaria Chlorella virus 1

Query: 1 YKEPLGAPRFHN 12
YK AP+F N
Sbjct: 265 YKRYFSAPKFEN 276


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YKEPLGAPRFH 11
YK LGA RF+
Sbjct: 672 YKTALGAVRFN 682


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YKEPLGAPRFH 11
YK LGA RF+
Sbjct: 672 YKTALGAVRFN 682


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YKEPLGAPRFH 11
YK LGA RF+
Sbjct: 672 YKTALGAVRFN 682


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YKEPLGAPRFH 11
YK LGA RF+
Sbjct: 672 YKTALGAVRFN 682


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YKEPLGAPRFH 11
YK LGA RF+
Sbjct: 672 YKTALGAVRFN 682


>sp|VG66_ICHVA|UNCHARACTERIZED protein ORF66|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 KEPLGAPR 9
K+P+G PR
Sbjct: 78 KDPIGGPR 85


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YKEPLGAPRFH 11
YK LGA RF+
Sbjct: 672 YKTALGAVRFN 682


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YKEPLGAPRFH 11
YK LGA RF+
Sbjct: 672 YKTALGAVRFN 682


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YKEPLGAPRFH 11
YK LGA RF+
Sbjct: 666 YKTALGAVRFN 676


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YKEPLGAPRFH 11
YK LGA RF+
Sbjct: 672 YKTALGAVRFN 682


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YKEPLGAPRFH 11
YK LGA RF+
Sbjct: 672 YKTALGAVRFN 682


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 YKEPLGAPRF 10
+KEP G P +
Sbjct: 900 FKEPYGLPHY 909


>sp|POLG_HAVS2|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 1 YKEPLGAPRFH 11
YK LGA RF+
Sbjct: 676 YKTALGAIRFN 686


>sp|VG80_BPML5|GENE 80 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 6 GAPRFH 11
G+PRFH
Sbjct: 49 GSPRFH 54


>sp|VP2_BTV3V|OUTER capsid protein VP2|Bluetongue virus 3 (isolate South

Query: 5 LGAPRFH 11
+GAP+FH
Sbjct: 210 VGAPQFH 216


>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YKEPLGAPRFH 11
YK LGA RF+
Sbjct: 672 YKTALGAVRFN 682


>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YKEPLGAPRFH 11
YK LGA RF+
Sbjct: 651 YKTALGAVRFN 661


>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 5 LGAPRFH 11
LGAP FH
Sbjct: 265 LGAPVFH 271


>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)

Query: 5 LGAPRFH 11
LGAP FH
Sbjct: 265 LGAPVFH 271


>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)

Query: 5 LGAPRFH 11
LGAP FH
Sbjct: 265 LGAPVFH 271


>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)

Query: 5 LGAPRFH 11
LGAP FH
Sbjct: 265 LGAPVFH 271


>sp|POLG_HAVSC|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 1 YKEPLGAPRFH 11
YK LGA RF+
Sbjct: 672 YKTALGAIRFN 682


>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)

Query: 5 LGAPRFH 11
LGAP FH
Sbjct: 265 LGAPVFH 271


>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)

Query: 2 KEPLGAP 8
K PLGAP
Sbjct: 71 KSPLGAP 77


>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967)

Query: 2 KEPLGAP 8
K PLGAP
Sbjct: 71 KSPLGAP 77


>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 5 LGAPRFH 11
LGAP FH
Sbjct: 265 LGAPVFH 271


>sp|KITH_EHV2|THYMIDINE kinase|Equine herpesvirus 2 (strain 86/87)

Query: 3 EPLGAPRF 10
EPLG P F
Sbjct: 190 EPLGHPTF 197


>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)

Query: 2 KEPLGAPRFH 11
KEP+ PR H
Sbjct: 637 KEPVPFPRLH 646


>sp|POLG_PVYO|GENOME polyprotein|Potato virus Y (strain O)

Query: 1 YKEPLGAPR 9
YKE LGA R
Sbjct: 177 YKEILGATR 185


>sp|PG153_VACCW|ENVELOP protein OPG153|Vaccinia virus (strain Western Reserve)

Query: 2 KEPLGAP 8
K PLGAP
Sbjct: 71 KSPLGAP 77


>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YKEPLGAPRFH 11
YK LGA RF+
Sbjct: 176 YKTALGAVRFN 186


>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen)

Query: 2 KEPLGAP 8
K PLGAP
Sbjct: 71 KSPLGAP 77


>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)

Query: 6 GAPRFH 11
GAPR+H
Sbjct: 104 GAPRYH 109


>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)

Query: 6 GAPRFH 11
GAPR+H
Sbjct: 104 GAPRYH 109




THE END