OSMR_HUMAN Blast OutputR
Viruses
1|SequenceR|10|1|TTQFVAFLAM

***** No hits found ******


2|SequenceR|15|6|LTLFFTTQFV

>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 1 LTLFFTTQFV 10
LT FFTT F+
Sbjct: 1586 LTPFFTTNFI 1595


>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)

Query: 1 LTLFFTTQFV 10
LT FFTT F+
Sbjct: 1586 LTPFFTTNFI 1595


>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus

Query: 1 LTLFFTTQFV 10
LT FFTT F+
Sbjct: 1595 LTPFFTTNFI 1604


>sp|GLYCO_RYSV|GLYCOPROTEIN yellow stunt virus (RYSV)

Query: 1 LTLFFTTQF 9
LT FF T+F
Sbjct: 160 LTTFFETKF 168


>sp|11011_ASFP4|PROTEIN MGF 110-11L|African swine fever virus (isolate

Query: 1 LTLFFTTQFV 10
L++F+T QF+
Sbjct: 208 LSIFYTKQFL 217




3|SequenceR|20|11|TRLSLLTLFF

***** No hits found ******


4|SequenceR|25|16|VESQYTRLSL

***** No hits found ******


5|SequenceR|30|21|LREALVESQY

***** No hits found ******


6|SequenceR|35|26|VPTLPLREAL

>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 VPTLPLREAL 10
VP+LP R+AL
Sbjct: 18 VPSLPFRDAL 27


>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 1 VPTLPLREAL 10
VP+LP+R+ L
Sbjct: 18 VPSLPIRDVL 27


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 1 VPTLPLREAL 10
VP+LP+R+ L
Sbjct: 18 VPSLPIRDVL 27


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 2 PTLPLRE 8
PT+P+RE
Sbjct: 2122 PTMPMRE 2128


>sp|DPOL_GPCMV|DNA polymerase|Guinea pig cytomegalovirus (strain 22122)

Query: 2 PTLPLRE 8
PTLP RE
Sbjct: 84 PTLPCRE 90


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 2 PTLPLRE 8
PT+P+RE
Sbjct: 2122 PTMPMRE 2128


>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 1 VPTLPLRE 8
VP +PLR+
Sbjct: 2927 VPAIPLRD 2934


>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 1 VPTLPLRE 8
+PTLP RE
Sbjct: 1829 LPTLPARE 1836


>sp|L_EBLV1|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 1 (strain

Query: 2 PTLPLREAL 10
PT+ LREA+
Sbjct: 975 PTILLREAI 983




7|SequenceR|40|31|SVKLSVPTLP

>sp|SPIKE_BEV|SPIKE glycoprotein|Berne virus (BEV)

Query: 1 SVKLSVPTLP 10
+VKLS+P LP
Sbjct: 1090 NVKLSMPKLP 1099


>sp|SPIKE_BRV1|SPIKE glycoprotein|Breda virus 1 (BRV-1)

Query: 1 SVKLSVPTLP 10
+VKLS+P LP
Sbjct: 1091 NVKLSMPKLP 1100


>sp|CAPSD_SJNNV|CAPSID protein alpha|Striped jack nervous necrosis virus

Query: 1 SVKLSVPTL 9
SV+LSVP+L
Sbjct: 204 SVRLSVPSL 212


>sp|POLN_DCVEB|REPLICASE polyprotein|Drosophila C virus (strain EB)

Query: 3 KLSVPTL 9
KLSVPT+
Sbjct: 1257 KLSVPTM 1263




8|SequenceR|45|36|RTSNTSVKLS

***** No hits found ******


9|SequenceR|50|41|LHLSQRTSNT

>sp|VXIS_BPAPS|PROBABLE excisionase|Acyrthosiphon pisum secondary endosymbiont phage

Query: 2 HLSQRTSN 9
HL+QRT N
Sbjct: 104 HLAQRTKN 111


>sp|DSAD1_BPSPB|DSR anti-defense 1|Bacillus phage SPbeta (Bacillus phage

Query: 1 LHLSQRTSN 9
LHLS+R S+
Sbjct: 100 LHLSERISS 108


>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain

Query: 1 LHLSQRTSNT 10
+HL Q+ SNT
Sbjct: 260 IHLHQQLSNT 269


>sp|CAPSD_BPPRD|MAJOR capsid protein P3|Enterobacteria phage PRD1 (Bacteriophage PRD1)

Query: 2 HLSQRTSN 9
+LSQRT+N
Sbjct: 305 YLSQRTAN 312




10|SequenceR|55|46|HVTWQLHLSQ

>sp|VP5_APRVF|OUTER capsid protein VP5|Aedes pseudoscutellaris reovirus (isolate

Query: 1 HVTWQLH 7
HVTW LH
Sbjct: 185 HVTWHLH 191


>sp|VP16_EHV4|TEGUMENT protein VP16 homolog|Equine herpesvirus 4 (strain 1942)

Query: 2 VTWQLHLSQ 10
V+W+LH SQ
Sbjct: 250 VSWRLHASQ 258


>sp|VP16_EHV1B|TEGUMENT protein VP16 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 2 VTWQLHLSQ 10
V+W+LH SQ
Sbjct: 275 VSWRLHASQ 283


>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 3 TWQLHLSQ 10
TWQLH Q
Sbjct: 983 TWQLHTIQ 990


>sp|VP16_BHV1P|TEGUMENT protein VP16 homolog|Bovine herpesvirus 1.1 (strain P8-2)

Query: 2 VTWQLHLSQ 10
V+W+LH Q
Sbjct: 243 VSWRLHSQQ 251


>sp|KITH_AHV1W|THYMIDINE kinase|Alcelaphine herpesvirus 1 (strain WC11)

Query: 4 WQLHLS 9
W+LHLS
Sbjct: 93 WKLHLS 98


>sp|YL137_MIMIV|UNCHARACTERIZED protein L137|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 HVTWQLHL 8
H+TW L+L
Sbjct: 214 HLTWDLYL 221


>sp|POL2_APMV|RNA2 polyprotein|Andean potato mottle virus (APMV)

Query: 2 VTWQLHL 8
V WQ+H+
Sbjct: 579 VAWQIHV 585


>sp|CAPSD_TTVZ1|CAPSID protein|Torque teno douroucouli virus (isolate

Query: 1 HVTWQLHLSQ 10
+ TWQ HL++
Sbjct: 273 YYTWQEHLAE 282


>sp|POL_CERV|ENZYMATIC polyprotein|Carnation etched ring virus (CERV)

Query: 2 VTWQLHLSQ 10
V WQ+ LSQ
Sbjct: 623 VRWQMWLSQ 631


>sp|YL142_MIMIV|UNCHARACTERIZED protein L142|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 HVTWQLH 7
H+TW L+
Sbjct: 453 HLTWDLY 459


>sp|YL138_MIMIV|UNCHARACTERIZED protein L138|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 HVTWQLH 7
H+TW L+
Sbjct: 217 HLTWDLY 223


>sp|POL_FENV1|POL polyprotein|Feline endogenous virus ECE1

Query: 3 TWQLHLSQ 10
TW+LH S+
Sbjct: 1029 TWKLHRSE 1036




11|SequenceR|60|51|HYPLNHVTWQ

>sp|VF335_IIV3|UNCHARACTERIZED protein 017R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 HYPLNHVTW 9
+YP+ HV W
Sbjct: 213 NYPIQHVIW 221


>sp|VL2_BPV2|MINOR capsid protein L2|Bos taurus papillomavirus 2 (Bovine

Query: 3 PLNHVTWQ 10
PL+H WQ
Sbjct: 177 PLDHANWQ 184


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 1 HYPLNHVT 8
H+PLNH +
Sbjct: 1083 HFPLNHYS 1090


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 1 HYPLNHVT 8
H+PLNH +
Sbjct: 1083 HFPLNHYS 1090


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 1 HYPLNHVT 8
H+PLNH +
Sbjct: 1083 HFPLNHYS 1090


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 1 HYPLNHVT 8
H+PLNH +
Sbjct: 1083 HFPLNHYS 1090


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 1 HYPLNHVT 8
H+PLNH +
Sbjct: 1083 HFPLNHYS 1090


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 1 HYPLNHVT 8
H+PLNH +
Sbjct: 1083 HFPLNHYS 1090


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 1 HYPLNHVT 8
H+PLNH +
Sbjct: 1083 HFPLNHYS 1090


>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1 HYPLNHVTW 9
HY L H+ W
Sbjct: 28 HYMLKHLVW 36


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 1 HYPLNHVT 8
H+PLNH +
Sbjct: 1083 HFPLNHYS 1090


>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27

Query: 2 YPLNHVTWQ 10
YP+N+ W+
Sbjct: 596 YPINNANWK 604


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 1 HYPLNHVT 8
H+PLNH +
Sbjct: 1083 HFPLNHYS 1090


>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57

Query: 2 YPLNHVTWQ 10
YP+N+ W+
Sbjct: 596 YPINNANWK 604


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 HYPLNHVTW 9
HY L H+ W
Sbjct: 28 HYMLKHLVW 36


>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a

Query: 2 YPLNHVTWQ 10
YP+N+ W+
Sbjct: 596 YPINNANWK 604


>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1 HYPLNHVTW 9
HY + H+ W
Sbjct: 28 HYMMKHLVW 36


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 HYPLNHVTWQ 10
H+P+N W+
Sbjct: 236 HHPINLADWE 245


>sp|MCE_ASFWA|MRNA-CAPPING enzyme|African swine fever virus (isolate

Query: 4 LNHVTWQ 10
+NHV+W+
Sbjct: 532 INHVSWE 538


>sp|MCE_ASFP4|MRNA-CAPPING enzyme|African swine fever virus (isolate

Query: 4 LNHVTWQ 10
+NHV+W+
Sbjct: 532 INHVSWE 538


>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 HYPLNHVTW 9
++P N VTW
Sbjct: 234 NWPANPVTW 242


>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 YPLNHVTW 9
Y L HV W
Sbjct: 29 YKLKHVVW 36


>sp|B5_HHV6Z|PROTEIN B5|Human herpesvirus 6B (strain Z29)

Query: 1 HYPLNHV 7
H+PL HV
Sbjct: 65 HFPLYHV 71


>sp|RDRP_APRVF|RNA-DIRECTED RNA polymerase VP2|Aedes pseudoscutellaris reovirus (isolate

Query: 2 YPLNH 6
YPLNH
Sbjct: 87 YPLNH 91


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 HYPLNHVTW 9
HY + H+ W
Sbjct: 28 HYMMKHLVW 36


>sp|VP2_ROTPC|INNER capsid protein VP2|Rotavirus C (strain RVC/Pig/United

Query: 4 LNHVTWQ 10
LNH +WQ
Sbjct: 356 LNHNSWQ 362


>sp|VL2_BPV1|MINOR capsid protein L2|Bovine papillomavirus type 1

Query: 3 PLNHVTWQ 10
PL+ TWQ
Sbjct: 177 PLDRPTWQ 184


>sp|MCE_ASFM2|MRNA-CAPPING enzyme|African swine fever virus (isolate

Query: 4 LNHVTWQ 10
+NHV+W+
Sbjct: 532 VNHVSWE 538


>sp|1ATF_PRRSS|TRUNCATED polyprotein 1aTF|Porcine reproductive and respiratory syndrome

Query: 1 HYPLNHVTWQ 10
H+P+N W+
Sbjct: 236 HHPINLADWE 245


>sp|1A_TOBSV|REPLICATION protein 1a|Tobacco streak virus (strain WC)

Query: 1 HYPLNHVTWQ 10
H PL +V W+
Sbjct: 235 HIPLLNVDWE 244


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1 HYPLNHVTWQ 10
HY L+ V W+
Sbjct: 1814 HYKLDEVLWE 1823


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1 HYPLNHVTWQ 10
HY L+ V W+
Sbjct: 1814 HYKLDEVLWE 1823


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1 HYPLNHVTWQ 10
HY L+ V W+
Sbjct: 1811 HYKLDEVLWE 1820


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1 HYPLNHVTWQ 10
HY L+ V W+
Sbjct: 1811 HYKLDEVLWE 1820


>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 YPLNHVTW 9
Y L H+ W
Sbjct: 29 YKLKHIVW 36


>sp|041R_FRG3G|UNCHARACTERIZED protein 041R|Frog virus 3 (isolate Goorha)

Query: 4 LNHVTWQ 10
+NH TW+
Sbjct: 1075 MNHPTWE 1081


>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 1 HYPLNHV 7
H P+NH+
Sbjct: 1055 HRPVNHI 1061


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 YPLNHVTW 9
Y L HV W
Sbjct: 29 YKLKHVVW 36


>sp|J1_SWPVK|PROTEIN J1 homolog|Swinepox virus (strain Kasza) (SWPV)

Query: 3 PLNHVTW 9
P H+TW
Sbjct: 79 PRRHITW 85


>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 YPLNHVTW 9
Y L H+ W
Sbjct: 29 YKLKHIVW 36


>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 YPLNHVTW 9
Y L H+ W
Sbjct: 29 YKLKHIVW 36


>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169)

Query: 1 HYPLNHV 7
HY +NHV
Sbjct: 82 HYGVNHV 88


>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 HYPLNHVTW 9
Y L H+ W
Sbjct: 28 QYRLKHIVW 36


>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 YPLNHVTW 9
Y L H+ W
Sbjct: 29 YKLKHIVW 36


>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1 HYPLNHVTW 9
Y L H+ W
Sbjct: 28 QYKLKHIVW 36


>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30

Query: 2 YPLNHVTWQ 10
Y LN+V W+
Sbjct: 584 YQLNNVNWK 592


>sp|NS1A_MASV1|NON-STRUCTURAL polyprotein 1A|Mink astrovirus 1 (MAstV-1)

Query: 2 YPLNHVTWQ 10
+ LNH W+
Sbjct: 841 FKLNHTMWK 849


>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 YPLNHVTW 9
Y L H+ W
Sbjct: 29 YKLKHIVW 36


>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 YPLNHVTW 9
Y L HV W
Sbjct: 29 YRLKHVVW 36


>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 YPLNHVTW 9
Y L H+ W
Sbjct: 29 YKLKHIVW 36


>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 YPLNHVTW 9
Y L H+ W
Sbjct: 29 YKLKHIVW 36


>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 YPLNHVTW 9
Y L H+ W
Sbjct: 29 YKLKHIVW 36


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 1 HYPLNHV 7
+YP NH+
Sbjct: 1141 YYPSNHI 1147


>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 YPLNHVTW 9
Y L H+ W
Sbjct: 29 YKLKHIVW 36


>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 YPLNHVTW 9
Y L H+ W
Sbjct: 29 YKLKHIVW 36


>sp|VF337_IIV3|PUTATIVE membrane protein 047R|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 PLNHVTW 9
PL VTW
Sbjct: 83 PLTRVTW 89


>sp|NS1AB_MASV1|NON-STRUCTURAL polyprotein 1AB|Mink astrovirus 1 (MAstV-1)

Query: 2 YPLNHVTWQ 10
+ LNH W+
Sbjct: 841 FKLNHTMWK 849


>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 YPLNHVTW 9
Y L H+ W
Sbjct: 29 YKLKHIVW 36


>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 YPLNHVTW 9
Y L H+ W
Sbjct: 29 YKLKHIVW 36


>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 YPLNHVTW 9
Y L HV W
Sbjct: 29 YMLKHVVW 36


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 HYPLNHVTW 9
Y L H+ W
Sbjct: 28 QYKLKHIVW 36


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 YPLNHVTW 9
Y L HV W
Sbjct: 29 YRLKHVVW 36


>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 YPLNHVTW 9
Y L H+ W
Sbjct: 29 YQLKHIVW 36


>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1 HYPLNHVTW 9
Y L H+ W
Sbjct: 28 QYRLKHIVW 36


>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1 HYPLNHVTW 9
Y L H+ W
Sbjct: 28 QYRLKHIVW 36


>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 YPLNHVTW 9
Y L H+ W
Sbjct: 29 YKLKHIVW 36


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 YPLNHVTW 9
Y L H+ W
Sbjct: 29 YKLKHIVW 36


>sp|GAG_SIVSP|GAG polyprotein|Simian immunodeficiency virus (isolate PBj14/BCL-3)

Query: 2 YPLNHVTW 9
Y L H+ W
Sbjct: 29 YQLKHIVW 36


>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 YPLNHVTW 9
Y L H+ W
Sbjct: 29 YRLKHIVW 36




12|SequenceR|65|56|MKLEQHYPLN

>sp|Y01B_BPT4|UNCHARACTERIZED 29.0 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 MKLEQHYPLN 10
+KL++ YPLN
Sbjct: 230 LKLKRGYPLN 239


>sp|L_MMVR|RNA-DIRECTED RNA polymerase L|Maize mosaic virus (isolate Maize/United

Query: 2 KLEQHYPLN 10
++ +HYPL+
Sbjct: 400 RIHKHYPLH 408


>sp|YL670_MIMIV|PUTATIVE serine/threonine-protein kinase L670|Acanthamoeba polyphaga

Query: 3 LEQHYP 8
LE+HYP
Sbjct: 482 LEKHYP 487


>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)

Query: 3 LEQHYP 8
L QHYP
Sbjct: 370 LSQHYP 375


>sp|ETF2_MYXVL|EARLY transcription factor 82 kDa|Myxoma virus (strain Lausanne) (MYXV)

Query: 2 KLEQHYP 8
KLE++YP
Sbjct: 699 KLEKYYP 705


>sp|ETF2_RFVKA|EARLY transcription factor 82 kDa|Rabbit fibroma virus (strain Kasza)

Query: 2 KLEQHYP 8
KLE++YP
Sbjct: 699 KLEKYYP 705


>sp|CAPSD_PAVPN|CAPSID protein VP1|Porcine parvovirus (strain NADL-2) (PPV)

Query: 3 LEQHYPLN 10
+EQH P+N
Sbjct: 155 VEQHNPIN 162


>sp|CAPSD_PAVPK|CAPSID protein VP1|Porcine parvovirus (strain Kresse) (PPV)

Query: 3 LEQHYPLN 10
+EQH P+N
Sbjct: 155 VEQHNPIN 162


>sp|CAPSD_PAVP9|CAPSID protein VP1|Porcine parvovirus (strain 90HS) (PPV)

Query: 3 LEQHYPLN 10
+EQH P+N
Sbjct: 155 VEQHNPIN 162


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 3 LEQHYPL 9
L+ HYPL
Sbjct: 1724 LDHHYPL 1730




13|SequenceR|70|61|QIQFVMKLEQ

***** No hits found ******


14|SequenceR|75|66|EIRSIQIQFV

>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate

Query: 1 EIRSIQIQFV 10
E+R+IQ+Q V
Sbjct: 1587 EVRTIQLQNV 1596




15|SequenceR|80|71|IVNSTEIRSI

>sp|VG10_EHV2|UNCHARACTERIZED gene 10 protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 VNSTEIRSI 10
VNST+IR++
Sbjct: 368 VNSTDIRTV 376




16|SequenceR|85|76|YNGVWIVNST

>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 2 NGVWIVNST 10
NG W +NST
Sbjct: 417 NGSWHINST 425


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2 NGVWIVNST 10
NG W +NST
Sbjct: 417 NGSWHINST 425


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 2 NGVWIVNST 10
NG W +NST
Sbjct: 418 NGSWHINST 426


>sp|US16_HCMVM|PROTEIN US16|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 NGVWIV 7
NGVW+V
Sbjct: 189 NGVWVV 194


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 NGVWIVNST 10
NG W +NST
Sbjct: 417 NGSWHINST 425


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2 NGVWIVNST 10
NG W +NST
Sbjct: 417 NGSWHINST 425


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 4 VWIVNST 10
+W+VNST
Sbjct: 118 LWVVNST 124


>sp|MCP_ALHV1|MAJOR capsid protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 4 VWIVNST 10
VW+VN T
Sbjct: 432 VWVVNKT 438


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 YNGVWIVNS 9
+NG W++N+
Sbjct: 2986 FNGSWVLNN 2994


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 YNGVWIVNS 9
+NG W++N+
Sbjct: 2986 FNGSWVLNN 2994


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 YNGVWIVNS 9
+NG W++N+
Sbjct: 2986 FNGSWVLNN 2994


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 YNGVWIVNS 9
+NG W++N+
Sbjct: 2986 FNGSWVLNN 2994


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 YNGVWIVNS 9
+NG W++N+
Sbjct: 2986 FNGSWVLNN 2994


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2 NGVWIVNST 10
NG W +NST
Sbjct: 417 NGSWHLNST 425


>sp|VTPX_TTV1K|VIRAL protein TPX|Thermoproteus tenax virus 1 (strain

Query: 1 YNGVWIV 7
Y+GVW+V
Sbjct: 47 YDGVWVV 53


>sp|DNLI_NPVLD|DNA ligase|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 1 YNGVWIVNST 10
YNGV +N+T
Sbjct: 289 YNGVSYLNAT 298


>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1

Query: 1 YNGVWIVNST 10
+N W+ NST
Sbjct: 384 FNSTWLFNST 393


>sp|VF155_IIV6|UNCHARACTERIZED protein 155L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 NGVWIVNS 9
NG W VN+
Sbjct: 138 NGKWFVNT 145


>sp|VF015_IIV3|UNCHARACTERIZED protein 015R|Invertebrate iridescent virus 3 (IIV-3)

Query: 4 VWIVNST 10
+W+VNST
Sbjct: 30 LWLVNST 36


>sp|ENV_HAPV1|ENVELOPE protein|Halorubrum pleomorphic virus 1 (HRPV-1)

Query: 2 NGVWIVNST 10
NG W VN+T
Sbjct: 395 NGSWQVNTT 403


>sp|VTP3_TTV1V|VIRAL protein TPX|Thermoproteus tenax virus 1 (strain

Query: 1 YNGVWIV 7
Y+GVW++
Sbjct: 47 YDGVWVI 53


>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 2 NGVWIV 7
NGVW++
Sbjct: 2944 NGVWVM 2949


>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 2 NGVWIV 7
NGVW++
Sbjct: 2941 NGVWVM 2946


>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 2 NGVWIV 7
NGVW++
Sbjct: 2927 NGVWVM 2932


>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)

Query: 2 NGVWIV 7
NGVW++
Sbjct: 2927 NGVWVM 2932


>sp|POLG_PWVTB|GENOME polyprotein|Passionfruit woodiness virus (strain Tip

Query: 2 NGVWIV 7
NGVW++
Sbjct: 130 NGVWVM 135


>sp|POLG_PWVSE|GENOME polyprotein|Passionfruit woodiness virus (strain Severe)

Query: 2 NGVWIV 7
NGVW++
Sbjct: 130 NGVWVM 135


>sp|POLG_PWVMI|GENOME polyprotein|Passionfruit woodiness virus (strain Mild)

Query: 2 NGVWIV 7
NGVW++
Sbjct: 130 NGVWVM 135


>sp|POLG_PVYYO|GENOME polyprotein|Potato virus Y (strain Yo)

Query: 2 NGVWIV 7
NGVW++
Sbjct: 146 NGVWVM 151


>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)

Query: 2 NGVWIV 7
NGVW++
Sbjct: 2925 NGVWVM 2930


>sp|POLG_PVYHU|GENOME polyprotein|Potato virus Y (strain Hungarian)

Query: 2 NGVWIV 7
NGVW++
Sbjct: 2923 NGVWVM 2928


>sp|POLG_PVYCH|GENOME polyprotein|Potato virus Y (strain Chinese)

Query: 2 NGVWIV 7
NGVW++
Sbjct: 189 NGVWVM 194


>sp|POLG_PEMV|GENOME polyprotein|Pepper mottle virus (PeMV)

Query: 2 NGVWIV 7
NGVW++
Sbjct: 243 NGVWVM 248


>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus

Query: 2 NGVWIV 7
NGVW++
Sbjct: 2927 NGVWVM 2932


>sp|COLL7_MIMIV|COLLAGEN-LIKE protein 7|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 NGVWIVN 8
NGVW+ N
Sbjct: 69 NGVWVKN 75


>sp|POLG_WMV2A|GENOME polyprotein|Watermelon mosaic virus II (isolate

Query: 2 NGVWIV 7
NGVW++
Sbjct: 163 NGVWVM 168


>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YNGVWIVNST 10
+N W+ NST
Sbjct: 401 FNSTWLSNST 410


>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)

Query: 2 NGVWIVNST 10
NG W +NST
Sbjct: 301 NGSWHINST 309


>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)

Query: 2 NGVWIVNST 10
NG W +NST
Sbjct: 301 NGSWHINST 309


>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Query: 1 YNGVWIV 7
+NG WIV
Sbjct: 1102 FNGNWIV 1108


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 YNGVWIVN 8
+NG W++N
Sbjct: 2986 FNGSWVLN 2993


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 YNGVWIVN 8
+NG W++N
Sbjct: 2986 FNGSWVLN 2993


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 YNGVWIVN 8
+NG W++N
Sbjct: 2986 FNGSWVLN 2993


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 YNGVWIVN 8
+NG W++N
Sbjct: 2986 FNGSWVLN 2993


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 YNGVWIVN 8
+NG W++N
Sbjct: 2986 FNGSWVLN 2993


>sp|POLG_WMV2T|GENOME polyprotein|Watermelon mosaic virus II (isolate

Query: 2 NGVWIV 7
NGVW++
Sbjct: 316 NGVWVM 321




17|SequenceR|90|81|KVTTSYNGVW

>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum

Query: 3 TTSYNGVW 10
TT++N VW
Sbjct: 1082 TTAFNAVW 1089


>sp|VF414_IIV6|PUTATIVE hydrolase 414L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 VTTSYNGVW 10
+T SYN +W
Sbjct: 70 ITQSYNNLW 78


>sp|PHOSP_NDVB1|PHOSPHOPROTEIN disease virus (strain Chicken/United

Query: 2 VTTSYNGVW 10
V T+Y+G W
Sbjct: 179 VNTAYHGQW 187


>sp|ALPHA_BSMV|REPLICATION protein alpha-A|Barley stripe mosaic virus (BSMV)

Query: 1 KVTTSYN 7
KVT+SYN
Sbjct: 677 KVTSSYN 683


>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 3 TTSYNGV 9
T SYNGV
Sbjct: 8 TVSYNGV 14


>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas)

Query: 3 TTSYNGV 9
T SYNGV
Sbjct: 8 TVSYNGV 14


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 5 SYNGVW 10
S+NG+W
Sbjct: 415 SHNGIW 420


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 5 SYNGVW 10
S+NG+W
Sbjct: 415 SHNGIW 420


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 5 SYNGVW 10
S+NG+W
Sbjct: 415 SHNGIW 420


>sp|019R_FRG3G|PUTATIVE serine/threonine-protein kinase 019R|Frog virus 3 (isolate Goorha)

Query: 1 KVTTSYNG 8
KVT S+NG
Sbjct: 626 KVTDSFNG 633


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 3 TTSYNGVW 10
TT+ NG+W
Sbjct: 3270 TTTLNGLW 3277


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 3 TTSYNGVW 10
TT+ NG+W
Sbjct: 3258 TTTLNGLW 3265


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3 TTSYNGVW 10
TT+ NG+W
Sbjct: 3264 TTTLNGLW 3271


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 3 TTSYNGVW 10
TT+ NG+W
Sbjct: 3262 TTTLNGLW 3269


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 TTSYNGVW 10
TT+ NG+W
Sbjct: 3264 TTTLNGLW 3271


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 3 TTSYNGVW 10
TT+ NG+W
Sbjct: 3262 TTTLNGLW 3269


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 3 TTSYNGVW 10
TT+ NG+W
Sbjct: 3258 TTTLNGLW 3265


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 3 TTSYNGVW 10
TT+ NG+W
Sbjct: 3270 TTTLNGLW 3277


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3 TTSYNGVW 10
TT+ NG+W
Sbjct: 3287 TTTLNGLW 3294


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 TTSYNGVW 10
TT+ NG+W
Sbjct: 3287 TTTLNGLW 3294


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 4 TSYNGVW 10
T Y GVW
Sbjct: 2018 TGYRGVW 2024




18|SequenceR|95|86|LVQNWKVTTS

>sp|RDRP_PVMR|RNA replication polyprotein|Potato virus M (strain Russian)

Query: 3 QNWKVTT 9
+NW+VTT
Sbjct: 1219 ENWRVTT 1225


>sp|VF165_ASFB7|UNCHARACTERIZED protein F165R|African swine fever virus (strain

Query: 2 VQNWKVTTS 10
++NWKV+ +
Sbjct: 120 IENWKVSVN 128


>sp|VF165_ASFM2|UNCHARACTERIZED protein F165R|African swine fever virus (isolate

Query: 2 VQNWKVTTS 10
++NWKV+ +
Sbjct: 120 IENWKVSVN 128


>sp|VF165_ASFWA|UNCHARACTERIZED protein F165R|African swine fever virus (isolate

Query: 2 VQNWKVTTS 10
++NWKV+ +
Sbjct: 120 IENWKVSVN 128


>sp|VF165_ASFP4|UNCHARACTERIZED protein F165R|African swine fever virus (isolate

Query: 2 VQNWKVTTS 10
++NWKV+ +
Sbjct: 120 IENWKVSVN 128


>sp|COAT_TRVCA|COAT protein|Tobacco rattle virus (strain CAM)

Query: 2 VQNWKVTTS 10
V+NWK T+
Sbjct: 23 VENWKDVTT 31


>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse

Query: 2 VQNWKV 7
V+NWKV
Sbjct: 1381 VKNWKV 1386


>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United

Query: 2 VQNWKV 7
V+NWKV
Sbjct: 1381 VKNWKV 1386


>sp|VG10_EHV2|UNCHARACTERIZED gene 10 protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 LVQNWKV 7
V+NWKV
Sbjct: 22 FVENWKV 28


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2 VQNWKV 7
VQNWK+
Sbjct: 1663 VQNWKM 1668




19|SequenceR|100|91|EWSWHLVQNW

>sp|CAPSD_BPCHP|CAPSID protein VP1|Chlamydia phage 1 (Bacteriophage Chp1)

Query: 3 SWHLVQNW 10
SWHL QN+
Sbjct: 535 SWHLSQNF 542


>sp|YR654_MIMIV|PUTATIVE fucosyltransferase R654|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 EWSWHLVQ 8
++SWHLV+
Sbjct: 324 KYSWHLVE 331


>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P

Query: 1 EWSWHLVQN 9
EW+W L N
Sbjct: 121 EWTWALTLN 129


>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WSWHLVQNW 10
WSW + NW
Sbjct: 657 WSWFSITNW 665


>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New

Query: 1 EWSWHLVQNW 10
E+SW L++ W
Sbjct: 241 EFSWTLLETW 250


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 3 SWHLVQ 8
SWHLV+
Sbjct: 1421 SWHLVE 1426


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 3 SWHLVQ 8
SWHLV+
Sbjct: 1421 SWHLVE 1426


>sp|AC66_NPVAC|PROTEIN Ac66|Autographa californica nuclear polyhedrosis virus

Query: 3 SWHLVQNW 10
+W LVQN+
Sbjct: 180 TWELVQNF 187


>sp|VP2_EHDV1|OUTER capsid protein VP2|Epizootic hemorrhagic disease virus 1

Query: 1 EWSWHLVQ 8
E WH+VQ
Sbjct: 945 EHKWHIVQ 952


>sp|CAPSD_PVSP|CAPSID protein|Potato virus S (strain Peruvian)

Query: 2 WSWHLVQN 9
W++ LVQN
Sbjct: 193 WNYMLVQN 200


>sp|ITP_EHV1V|INNER tegument protein|Equine herpesvirus 1 (strain V592)

Query: 4 WHLVQNW 10
W + QNW
Sbjct: 92 WRIHQNW 98


>sp|ITP_EHV1B|INNER tegument protein|Equine herpesvirus 1 (strain Ab4p)

Query: 4 WHLVQNW 10
W + QNW
Sbjct: 92 WRIHQNW 98


>sp|IE61_CHV9D|E3 ubiquitin-protein ligase IE61|Cercopithecine herpesvirus 9 (strain

Query: 2 WSWH 5
W+WH
Sbjct: 356 WTWH 359


>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)

Query: 4 WHLVQNW 10
WHL W
Sbjct: 1071 WHLYDTW 1077


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 3 SWHLV 7
SWHLV
Sbjct: 1463 SWHLV 1467


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 3 SWHLV 7
SWHLV
Sbjct: 1470 SWHLV 1474


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 3 SWHLV 7
SWHLV
Sbjct: 1463 SWHLV 1467


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 3 SWHLV 7
SWHLV
Sbjct: 1470 SWHLV 1474


>sp|NRAM_I78AC|NEURAMINIDASE A virus (strain A/Turkey/Minnesota/501/1978

Query: 1 EWSWH 5
+WSWH
Sbjct: 454 DWSWH 458


>sp|NRAM_I84A0|NEURAMINIDASE A virus (strain A/Guinea

Query: 1 EWSWH 5
+WSWH
Sbjct: 454 DWSWH 458


>sp|NRAM_I74A2|NEURAMINIDASE A virus (strain A/Duck/Memphis/928/1974

Query: 1 EWSWH 5
+WSWH
Sbjct: 454 DWSWH 458


>sp|NRAM_I63A1|NEURAMINIDASE A virus (strain A/Turkey/Canada/1963

Query: 1 EWSWH 5
+WSWH
Sbjct: 454 DWSWH 458


>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 EWSWHLV 7
+W+WH V
Sbjct: 448 KWTWHNV 454


>sp|NRAM_I88A4|NEURAMINIDASE A virus (strain A/Herring

Query: 1 EWSWH 5
+WSWH
Sbjct: 454 DWSWH 458


>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 EWSWHLV 7
+W+WH V
Sbjct: 448 KWTWHNV 454


>sp|TFA_LAMBD|TAIL fiber assembly protein|Escherichia phage lambda (Bacteriophage

Query: 1 EWSWHLVQN 9
E SWHLV++
Sbjct: 62 EASWHLVED 70


>sp|NRAM_I90A1|NEURAMINIDASE A virus (strain A/Mallard/Edmonton/220/1990

Query: 1 EWSWH 5
+WSWH
Sbjct: 454 DWSWH 458


>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 EWSWHLV 7
+W+WH V
Sbjct: 448 KWTWHNV 454


>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 EWSWHLV 7
+W+WH V
Sbjct: 448 KWTWHNV 454


>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 EWSWHLV 7
+W+WH V
Sbjct: 448 KWTWHNV 454


>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 EWSWHLV 7
+W+WH V
Sbjct: 448 KWTWHNV 454


>sp|NRAM_I63A3|NEURAMINIDASE A virus (strain A/Duck/Ukraine/1/1963

Query: 1 EWSWH 5
+WSWH
Sbjct: 454 DWSWH 458


>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 EWSWHLV 7
+W+WH V
Sbjct: 448 KWTWHNV 454


>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 4 WHLVQNW 10
WH+ W
Sbjct: 1082 WHVTHRW 1088


>sp|NRAM_I89A7|NEURAMINIDASE A virus (strain A/Equine/Jillin/1/1989

Query: 1 EWSWH 5
+WSWH
Sbjct: 454 DWSWH 458


>sp|NRAM_I83A4|NEURAMINIDASE A virus (strain A/Turkey/Ireland/1378/1983

Query: 1 EWSWH 5
+WSWH
Sbjct: 454 DWSWH 458


>sp|NRAM_I88A1|NEURAMINIDASE A virus (strain A/Duck/Burjatia/652/1988

Query: 1 EWSWH 5
+WSWH
Sbjct: 454 DWSWH 458


>sp|NRAM_I80A6|NEURAMINIDASE A virus (strain A/Duck/Hokkaido/8/1980

Query: 1 EWSWH 5
+WSWH
Sbjct: 454 DWSWH 458


>sp|NRAM_I72A1|NEURAMINIDASE A virus (strain A/Duck/Chabarovsk/1610/1972

Query: 1 EWSWH 5
+WSWH
Sbjct: 454 DWSWH 458


>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WSWHLVQNW 10
W+W + NW
Sbjct: 662 WNWFNISNW 670


>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 WSWHLVQNW 10
W+W + NW
Sbjct: 664 WNWFNISNW 672


>sp|NRAM_I56A2|NEURAMINIDASE A virus (strain A/Duck/England/1/1956

Query: 2 WSWH 5
WSWH
Sbjct: 458 WSWH 461


>sp|VLYS_BPCP1|HOLIN phage Cp-1 (Bacteriophage Cp-1)

Query: 2 WSWHLVQNW 10
W W + +W
Sbjct: 34 WKWKVTDSW 42


>sp|NRAM_I76AK|NEURAMINIDASE A virus (strain A/Duck/New

Query: 2 WSWH 5
WSWH
Sbjct: 458 WSWH 461


>sp|NRAM_I56A1|NEURAMINIDASE A virus (strain A/Duck/Czechoslovakia/1956

Query: 2 WSWH 5
WSWH
Sbjct: 458 WSWH 461


>sp|VE4_BPV2|PROBABLE protein E4|Bos taurus papillomavirus 2 (Bovine

Query: 2 WSWH 5
W+WH
Sbjct: 85 WTWH 88


>sp|HN_PI3B|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (BPIV-3)

Query: 2 WSWHLV 7
W+WH V
Sbjct: 449 WTWHNV 454


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 3 SWHLVQNW 10
+W+++ NW
Sbjct: 319 AWNMMMNW 326


>sp|NRAM_I85A5|NEURAMINIDASE A virus (strain A/Equine/Santiago/1/1985

Query: 2 WSWH 5
WSWH
Sbjct: 455 WSWH 458


>sp|NRAM_I84A4|NEURAMINIDASE A virus (strain A/Gull/Astrakhan/227/1984

Query: 2 WSWH 5
WSWH
Sbjct: 458 WSWH 461


>sp|NRAM_I81A2|NEURAMINIDASE A virus (strain A/Equine/Kentucky/1/1981)

Query: 2 WSWH 5
WSWH
Sbjct: 455 WSWH 458


>sp|NRAM_I77AG|NEURAMINIDASE A virus (strain A/Budgerigar/Hokkaido/1/1977

Query: 2 WSWH 5
WSWH
Sbjct: 458 WSWH 461


>sp|NRAM_I91A0|NEURAMINIDASE A virus (strain A/Equine/Alaska/1/1991

Query: 2 WSWH 5
WSWH
Sbjct: 455 WSWH 458


>sp|NRAM_I86A3|NEURAMINIDASE A virus (strain A/Equine/Tennessee/5/1986

Query: 2 WSWH 5
WSWH
Sbjct: 455 WSWH 458


>sp|NRAM_I80AD|NEURAMINIDASE A virus (strain A/Gull/Minnesota/945/1980

Query: 2 WSWH 5
WSWH
Sbjct: 459 WSWH 462




20|SequenceR|105|96|LPLESEWSWH

>sp|Y068_OSHVF|PUTATIVE transmembrane protein ORF68|Ostreid herpesvirus 1 (isolate France)

Query: 2 PLESEWS 8
PLE EWS
Sbjct: 590 PLEEEWS 596


>sp|NRAM_I83A4|NEURAMINIDASE A virus (strain A/Turkey/Ireland/1378/1983

Query: 5 SEWSWH 10
++WSWH
Sbjct: 453 ADWSWH 458


>sp|NRAM_I78AC|NEURAMINIDASE A virus (strain A/Turkey/Minnesota/501/1978

Query: 5 SEWSWH 10
++WSWH
Sbjct: 453 ADWSWH 458


>sp|NRAM_I63A3|NEURAMINIDASE A virus (strain A/Duck/Ukraine/1/1963

Query: 5 SEWSWH 10
++WSWH
Sbjct: 453 ADWSWH 458


>sp|NRAM_I88A1|NEURAMINIDASE A virus (strain A/Duck/Burjatia/652/1988

Query: 5 SEWSWH 10
++WSWH
Sbjct: 453 ADWSWH 458


>sp|NRAM_I80A6|NEURAMINIDASE A virus (strain A/Duck/Hokkaido/8/1980

Query: 5 SEWSWH 10
++WSWH
Sbjct: 453 ADWSWH 458


>sp|NRAM_I72A1|NEURAMINIDASE A virus (strain A/Duck/Chabarovsk/1610/1972

Query: 5 SEWSWH 10
++WSWH
Sbjct: 453 ADWSWH 458


>sp|NRAM_I89A7|NEURAMINIDASE A virus (strain A/Equine/Jillin/1/1989

Query: 5 SEWSWH 10
++WSWH
Sbjct: 453 ADWSWH 458


>sp|NRAM_I84A0|NEURAMINIDASE A virus (strain A/Guinea

Query: 5 SEWSWH 10
++WSWH
Sbjct: 453 ADWSWH 458


>sp|NRAM_I74A2|NEURAMINIDASE A virus (strain A/Duck/Memphis/928/1974

Query: 5 SEWSWH 10
++WSWH
Sbjct: 453 ADWSWH 458


>sp|NRAM_I63A1|NEURAMINIDASE A virus (strain A/Turkey/Canada/1963

Query: 5 SEWSWH 10
++WSWH
Sbjct: 453 ADWSWH 458


>sp|NRAM_I90A1|NEURAMINIDASE A virus (strain A/Mallard/Edmonton/220/1990

Query: 5 SEWSWH 10
++WSWH
Sbjct: 453 ADWSWH 458


>sp|NRAM_I88A4|NEURAMINIDASE A virus (strain A/Herring

Query: 5 SEWSWH 10
++WSWH
Sbjct: 453 ADWSWH 458


>sp|NRAM_I81A2|NEURAMINIDASE A virus (strain A/Equine/Kentucky/1/1981)

Query: 5 SEWSWH 10
+ WSWH
Sbjct: 453 ASWSWH 458


>sp|NRAM_I86A3|NEURAMINIDASE A virus (strain A/Equine/Tennessee/5/1986

Query: 5 SEWSWH 10
+ WSWH
Sbjct: 453 ASWSWH 458


>sp|NRAM_I91A0|NEURAMINIDASE A virus (strain A/Equine/Alaska/1/1991

Query: 5 SEWSWH 10
+ WSWH
Sbjct: 453 ASWSWH 458


>sp|NRAM_I85A5|NEURAMINIDASE A virus (strain A/Equine/Santiago/1/1985

Query: 5 SEWSWH 10
+ WSWH
Sbjct: 453 ASWSWH 458


>sp|NRAM_I79A6|NEURAMINIDASE A virus (strain A/Equine/New

Query: 5 SEWSWH 10
+ WSWH
Sbjct: 453 ASWSWH 458


>sp|NRAM_I72A0|NEURAMINIDASE A virus (strain A/Equine/Algiers/1972

Query: 5 SEWSWH 10
+ WSWH
Sbjct: 453 ANWSWH 458


>sp|NRAM_I69A2|NEURAMINIDASE A virus (strain A/Equine/Sao

Query: 5 SEWSWH 10
+ WSWH
Sbjct: 453 ASWSWH 458


>sp|NRAM_I63A2|NEURAMINIDASE A virus (strain A/Equine/Miami/1/1963

Query: 5 SEWSWH 10
+ WSWH
Sbjct: 453 ASWSWH 458


>sp|FIB12_BPB03|PRE-NECK appendage protein|Bacillus phage B103 (Bacteriophage B103)

Query: 4 ESEWSWH 10
ES W+W
Sbjct: 747 ESTWNWQ 753


>sp|NRAM_I65A0|NEURAMINIDASE A virus (strain A/Quail/Italy/1117/1965

Query: 5 SEWSWH 10
++W+WH
Sbjct: 453 ADWTWH 458


>sp|POL_BLVJ|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Japanese

Query: 1 LPLESEWSWH 10
LPLE+ WH
Sbjct: 1121 LPLETPEQWH 1130


>sp|POL_BLVAU|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Australian)

Query: 1 LPLESEWSWH 10
LPLE+ WH
Sbjct: 1121 LPLETPEQWH 1130


>sp|NRAM_I56A2|NEURAMINIDASE A virus (strain A/Duck/England/1/1956

Query: 7 WSWH 10
WSWH
Sbjct: 458 WSWH 461


>sp|NRAM_I80AD|NEURAMINIDASE A virus (strain A/Gull/Minnesota/945/1980

Query: 7 WSWH 10
WSWH
Sbjct: 459 WSWH 462


>sp|NRAM_I56A1|NEURAMINIDASE A virus (strain A/Duck/Czechoslovakia/1956

Query: 7 WSWH 10
WSWH
Sbjct: 458 WSWH 461


>sp|NRAM_I77AG|NEURAMINIDASE A virus (strain A/Budgerigar/Hokkaido/1/1977

Query: 7 WSWH 10
WSWH
Sbjct: 458 WSWH 461


>sp|NRAM_I84A4|NEURAMINIDASE A virus (strain A/Gull/Astrakhan/227/1984

Query: 7 WSWH 10
WSWH
Sbjct: 458 WSWH 461


>sp|NRAM_I76AK|NEURAMINIDASE A virus (strain A/Duck/New

Query: 7 WSWH 10
WSWH
Sbjct: 458 WSWH 461


>sp|POL_SRV1|GAG-PRO-POL polyprotein|Simian retrovirus SRV-1

Query: 2 PLESEWSW 9
PL++ W W
Sbjct: 1724 PLDNTWPW 1731


>sp|POL2_APMV|RNA2 polyprotein|Andean potato mottle virus (APMV)

Query: 2 PLESEWS 8
PL+ EWS
Sbjct: 359 PLQYEWS 365


>sp|NRAM_I77AF|NEURAMINIDASE A virus (strain A/Gull/Maryland/704/1977

Query: 7 WSWH 10
WSWH
Sbjct: 459 WSWH 462


>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22

Query: 1 LPLESEWSW 9
LPL EWS+
Sbjct: 422 LPLGVEWSY 430




21|SequenceR|110|101|HTACELPLES

>sp|Y307_AFV1Y|UNCHARACTERIZED protein ORF307|Acidianus filamentous virus 1 (isolate

Query: 3 ACELPLES 10
ACE PLE+
Sbjct: 101 ACEAPLET 108


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 HTACELPL 8
H AC +PL
Sbjct: 28 HVACTVPL 35


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 HTACELPL 8
H AC +PL
Sbjct: 28 HVACTVPL 35


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 HTACELPL 8
H AC +PL
Sbjct: 28 HVACTVPL 35


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 HTACELPL 8
H AC +PL
Sbjct: 28 HVACTVPL 35


>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 1 HTACELPLES 10
+AC LPL S
Sbjct: 929 RSACNLPLSS 938


>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45

Query: 2 TACELPLE 9
T CE+PL+
Sbjct: 243 TKCEVPLD 250


>sp|NSS_SFSV|NON-STRUCTURAL protein NS-S|Sandfly fever sicilian virus (SFS)

Query: 4 CELPLE 9
CE+PLE
Sbjct: 50 CEIPLE 55


>sp|AC109_NPVAC|PROTEIN AC109|Autographa californica nuclear polyhedrosis virus

Query: 3 ACELPL 8
ACE+PL
Sbjct: 167 ACEIPL 172


>sp|L_IHNVO|RNA-DIRECTED RNA polymerase L|Infectious hematopoietic necrosis virus (strain

Query: 2 TACELPLES 10
+AC +PL S
Sbjct: 930 SACNIPLSS 938


>sp|L_IHNVW|RNA-DIRECTED RNA polymerase L|Infectious hematopoietic necrosis virus (strain

Query: 2 TACELPLES 10
+AC +PL S
Sbjct: 930 SACNIPLSS 938


>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18

Query: 2 TACELPLE 9
T CE+PL+
Sbjct: 277 TKCEVPLD 284


>sp|AN_PSHV1|ALKALINE nuclease|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 TACELPL 8
T+CELP+
Sbjct: 374 TSCELPI 380


>sp|L_ALLVP|RNA-DIRECTED RNA polymerase L|Allpahuayo mammarenavirus (isolate

Query: 1 HTACELPLE 9
HT LPLE
Sbjct: 1797 HTRVSLPLE 1805




22|SequenceR|115|106|KIRVFHTACE

>sp|NS1_LDCPR|NON-STRUCTURAL protein 1|Lymantria dispar cypovirus 1 (isolate

Query: 2 IRVFHTAC 9
IR+F+TAC
Sbjct: 501 IRIFNTAC 508


>sp|VG02_ICHVA|UNCHARACTERIZED protein ORF2|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 RVFHTAC 9
RVFHT C
Sbjct: 265 RVFHTRC 271


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 1 KIRVFHTA 8
KIRV+H A
Sbjct: 807 KIRVYHRA 814


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 1 KIRVFHTA 8
KIRV+H A
Sbjct: 807 KIRVYHRA 814


>sp|YR837_MIMIV|PUTATIVE ankyrin repeat protein R837|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 VFHTACE 10
VF+T+CE
Sbjct: 174 VFYTSCE 180


>sp|RIR1_PSHV1|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 IRVFHTAC 9
++ FHTAC
Sbjct: 537 VQGFHTAC 544


>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)

Query: 4 VFHTACE 10
+ HTACE
Sbjct: 982 ITHTACE 988




23|SequenceR|120|111|DDVLSKIRVF

>sp|CAPSD_VESVA|CAPSID protein VP1|Vesicular exanthema of swine virus

Query: 3 VLSKIRVF 10
+LSK+RVF
Sbjct: 125 ILSKLRVF 132


>sp|DPOL_ICHVA|DNA polymerase|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 DDVLSKIRVF 10
DD++ K+R+F
Sbjct: 869 DDMVEKLRLF 878


>sp|P14_PBCV1|MINOR capsid protein P14|Paramecium bursaria Chlorella virus 1

Query: 1 DDVLSKIRVF 10
DD++ K+R+F
Sbjct: 87 DDLIHKLRLF 96




24|SequenceR|125|116|EPFKADDVLS

>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1 EPFKADD 7
EP KADD
Sbjct: 2258 EPLKADD 2264


>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 EPFKADDVL 9
+PF+AD VL
Sbjct: 531 QPFRADAVL 539


>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 EPFKADDVL 9
+PF+AD VL
Sbjct: 531 QPFRADAVL 539


>sp|TYSY_SHV21|THYMIDYLATE synthase|Saimiriine herpesvirus 2 (strain 11)

Query: 1 EPFKADDVL 9
+ FKADD++
Sbjct: 270 DDFKADDII 278


>sp|GH_SUHVR|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain Rice)

Query: 1 EPFKADDVLS 10
EPF DVLS
Sbjct: 428 EPFSLLDVLS 437




25|SequenceR|130|121|SWFNPEPFKA

>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)

Query: 1 SWFNPEPF 8
S FNPEPF
Sbjct: 322 SSFNPEPF 329


>sp|RDRP_RCNMV|RNA-DIRECTED RNA polymerase|Red clover necrotic mosaic virus

Query: 2 WFNPEPFK 9
W NP+ FK
Sbjct: 640 WLNPKTFK 647


>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 2 WFNPEPF 8
WFN +PF
Sbjct: 753 WFNNQPF 759


>sp|DPOL_BPSP1|DNA polymerase|Bacillus phage SP01 (Bacteriophage SP01)

Query: 3 FNPEPFKA 10
FNP+P K
Sbjct: 11 FNPKPMKG 18


>sp|VP7_ROTH6|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 4 NPEPF 8
NPEPF
Sbjct: 72 NPEPF 76


>sp|VP7_ROTAP|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 4 NPEPF 8
NPEPF
Sbjct: 72 NPEPF 76


>sp|VP7_ROTHB|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 4 NPEPF 8
NPEPF
Sbjct: 72 NPEPF 76


>sp|SPIKE_BCHK5|SPIKE glycoprotein|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 SWFNPEP 7
S+F+PEP
Sbjct: 1191 SFFHPEP 1197


>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)

Query: 1 SWFNPEPFK 9
+W N EP+K
Sbjct: 654 TWGNNEPYK 662


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 SWFNPEPF 8
+W+N EP+
Sbjct: 353 NWYNIEPW 360


>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)

Query: 1 SWFNPEPFK 9
+W N EP+K
Sbjct: 654 TWGNNEPYK 662


>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)

Query: 1 SWFNPEPFK 9
+W N EP+K
Sbjct: 654 TWGNNEPYK 662


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 1 SWFNPEPF 8
+W+N EP+
Sbjct: 353 NWYNIEPW 360


>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 SWFNPEPF 8
+W+N EP+
Sbjct: 353 NWYNIEPW 360


>sp|ADPRM_MIMIV|PUTATIVE ADP-ribosyl glycohydrolase L543|Acanthamoeba polyphaga mimivirus

Query: 2 WFNPEPF 8
W+N PF
Sbjct: 93 WYNSNPF 99


>sp|DNLI_BPT3|DNA ligase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 3 FNPEPFKA 10
FN PFKA
Sbjct: 4 FNTNPFKA 11


>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African

Query: 1 SWFNPEPFK 9
+W N EP+K
Sbjct: 654 TWGNNEPYK 662


>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)

Query: 2 WFNPEPF 8
WF+P+P+
Sbjct: 87 WFDPKPY 93


>sp|YR879_MIMIV|PUTATIVE KilA-N domain-containing protein R879|Acanthamoeba polyphaga

Query: 1 SWFNPE 6
SW NPE
Sbjct: 58 SWCNPE 63


>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 WFNPEPF 8
WF+P+P+
Sbjct: 87 WFDPKPY 93


>sp|US441_GAHVG|UNCHARACTERIZED 16.7 kDa protein|Gallid herpesvirus 2 (strain GA)

Query: 2 WFNPEPFKA 10
W NPE FK
Sbjct: 119 WKNPEIFKV 127


>sp|VG93_GAHVM|UNCHARACTERIZED gene 93 protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 WFNPEPFKA 10
W NPE FK
Sbjct: 119 WKNPEIFKV 127


>sp|DPOL_MUHVS|DNA polymerase catalytic subunit|Murid herpesvirus 1 (strain Smith)

Query: 1 SWFNPE 6
SW++PE
Sbjct: 378 SWYSPE 383




26|SequenceR|135|126|WSSWNSWFNP

>sp|PORTL_ALHV1|PORTAL protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 WSSWNSWFN 9
WS++ SWF+
Sbjct: 89 WSTFQSWFS 97


>sp|RDRP_CARMS|PROBABLE RNA-directed RNA polymerase|Carnation mottle virus (isolate

Query: 1 WSSWNSWFNP 10
WS+WN + P
Sbjct: 458 WSAWNQFQTP 467


>sp|RDRP_CARMV|RNA-DIRECTED RNA polymerase|Carnation mottle virus (CarMV)

Query: 1 WSSWNSWFNP 10
WS+WN + P
Sbjct: 458 WSAWNQFQTP 467


>sp|YL888_MIMIV|UNCHARACTERIZED protein L888|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WSSWNSWFN 9
W+ N+WFN
Sbjct: 73 WTDQNTWFN 81


>sp|RDRP_TNVA|RNA-DIRECTED RNA polymerase|Tobacco necrosis virus (strain A)

Query: 2 SSWNSWFNP 10
S WN + NP
Sbjct: 416 SKWNKYVNP 424


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 1 WSSWNSWF 8
W W +WF
Sbjct: 773 WQRWENWF 780


>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 1 WSSWNSWFN 9
W SW S FN
Sbjct: 90 WESWWSSFN 98


>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)

Query: 1 WSSWNSWFN 9
W SW S FN
Sbjct: 90 WESWWSSFN 98


>sp|KITH_PSHV1|THYMIDINE kinase|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 SWNSWF 8
+W SWF
Sbjct: 43 AWRSWF 48


>sp|YR505_MIMIV|UNCHARACTERIZED protein R505|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 WNSWFN 9
WN+W N
Sbjct: 46 WNAWLN 51


>sp|GH_GPCMV|ENVELOPE glycoprotein H|Guinea pig cytomegalovirus (strain 22122)

Query: 2 SSWNSWFNP 10
S +SWF+P
Sbjct: 21 SETSSWFDP 29


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 3 SWNSWFNP 10
SW FNP
Sbjct: 733 SWGGMFNP 740


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 3 SWNSW 7
SWN+W
Sbjct: 1822 SWNNW 1826


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 3 SWNSWFNP 10
SW FNP
Sbjct: 733 SWGGMFNP 740


>sp|ENV_SIVGB|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate GB1)

Query: 2 SSWNSWFN 9
+SW SWF+
Sbjct: 720 TSWASWFD 727


>sp|VNS1_BTV10|NON-STRUCTURAL protein NS1|Bluetongue virus 10 (isolate USA)

Query: 3 SWNSWFNP 10
SW SW P
Sbjct: 303 SWQSWLLP 310


>sp|VG57_BPMD2|GENE 57 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 WSSWNSW 7
WS W +W
Sbjct: 13 WSPWRNW 19


>sp|RDRP_FHV|RNA-DIRECTED RNA polymerase|Flock house virus (FHV)

Query: 2 SSWNSWF 8
+SW WF
Sbjct: 235 TSWKEWF 241


>sp|RDRP_BBV|RNA-DIRECTED RNA polymerase|Black beetle virus (BBV)

Query: 2 SSWNSWF 8
+SW WF
Sbjct: 235 TSWKEWF 241


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2 SSWNSW 7
SSW SW
Sbjct: 1202 SSWLSW 1207


>sp|TEG6_EHV1K|TEGUMENT protein UL55 homolog|Equine herpesvirus 1 (strain Kentucky

Query: 1 WSSWNSWFNP 10
WSSW + P
Sbjct: 54 WSSWETTSQP 63


>sp|TEG6_EHV1B|TEGUMENT protein UL55 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 1 WSSWNSWFNP 10
WSSW + P
Sbjct: 54 WSSWETTSQP 63


>sp|P7_WTVNJ|PROTEIN P7|Wound tumor virus (strain NJ)

Query: 1 WSSWNSWFN 9
W +N+ FN
Sbjct: 314 WEEYNNMFN 322


>sp|P7_WTV|PROTEIN P7|Wound tumor virus (WTV)

Query: 1 WSSWNSWFN 9
W +N+ FN
Sbjct: 314 WEEYNNMFN 322


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 4 WNSWFN 9
WN WF+
Sbjct: 1083 WNLWFS 1088


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 4 WNSWFN 9
WN WF+
Sbjct: 1083 WNLWFS 1088


>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)

Query: 1 WSSWNSWFN 9
W SW + FN
Sbjct: 90 WESWWNTFN 98


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 WSSWNSWFN 9
+ S++ WFN
Sbjct: 2905 YQSFSKWFN 2913


>sp|LT_POVS1|LARGE T antigen|Simian virus 12 (strain wt100)

Query: 1 WSSWNSWFN 9
W +W S FN
Sbjct: 90 WEAWWSSFN 98


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 WSSWNSWFN 9
+ S++ WFN
Sbjct: 2905 YQSFSKWFN 2913


>sp|ENV_VILVK|ENVELOPE glycoprotein gp160|Maedi visna virus (strain KV1772)

Query: 1 WSSWNSWF 8
WSSW SW
Sbjct: 823 WSSWFSWL 830


>sp|ENV_VILV2|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514

Query: 1 WSSWNSWF 8
WSSW SW
Sbjct: 831 WSSWFSWL 838


>sp|ENV_VILV1|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514

Query: 1 WSSWNSWF 8
WSSW SW
Sbjct: 829 WSSWFSWL 836


>sp|PORTL_BPML5|PORTAL protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 4 WNSWFN 9
W WFN
Sbjct: 197 WAEWFN 202


>sp|CAPSD_MEVA|CAPSID protein VP1|Mink enteritis virus (strain Abashiri)

Query: 3 SWNSWFNP 10
+W WFNP
Sbjct: 254 AWGVWFNP 261


>sp|CAPSD_FPV19|CAPSID protein VP1|Feline panleukopenia virus (strain 193)

Query: 3 SWNSWFNP 10
+W WFNP
Sbjct: 259 AWGVWFNP 266


>sp|CAPSD_FPV|CAPSID protein VP1|Feline panleukopenia virus (FPV)

Query: 3 SWNSWFNP 10
+W WFNP
Sbjct: 259 AWGVWFNP 266


>sp|DPOL_ADECC|DNA polymerase|Canine adenovirus serotype 1 (strain

Query: 1 WSSWNS 6
W +WNS
Sbjct: 273 WDTWNS 278


>sp|CAPSD_PAVCN|CAPSID protein VP1|Canine parvovirus type 2 (isolate

Query: 3 SWNSWFNP 10
+W WFNP
Sbjct: 259 AWGVWFNP 266


>sp|CAPSD_PAVC7|CAPSID protein VP1|Canine parvovirus type 2 (strain

Query: 3 SWNSWFNP 10
+W WFNP
Sbjct: 259 AWGVWFNP 266


>sp|ENV_VILV|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514)

Query: 1 WSSWNSWF 8
WSSW SW
Sbjct: 822 WSSWFSWL 829


>sp|CAPSD_PAVC|CAPSID protein VP2|Canine parvovirus type 2 (CPV-2)

Query: 3 SWNSWFNP 10
+W WFNP
Sbjct: 116 AWGVWFNP 123


>sp|CAPSD_PAVCD|CAPSID protein VP1|Canine parvovirustype 2 (isolate Dog/United

Query: 3 SWNSWFNP 10
+W WFNP
Sbjct: 259 AWGVWFNP 266


>sp|CAPSD_PAVCB|CAPSID protein VP1|Canine parvovirus type 2 (isolate

Query: 3 SWNSWFNP 10
+W WFNP
Sbjct: 259 AWGVWFNP 266




27|SequenceR|140|131|VSVEEWSSWN

>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)

Query: 1 VSVEEWSSWN 10
VS+ W WN
Sbjct: 12 VSINGWKHWN 21


>sp|CHMA_BPPA3|CHIMALLIN phage PhiPA3 (Pseudomonas aeruginosa

Query: 2 SVEEWSSW 9
+++EW SW
Sbjct: 481 NIQEWMSW 488


>sp|CARG1_BPCA1|CARGO protein 1|Bacteroides phage crAss001 (Bacteroides phage

Query: 3 VEEWSSWN 10
+ EW SWN
Sbjct: 92 MSEWGSWN 99


>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 4 EEWSSW 9
EEW SW
Sbjct: 88 EEWESW 93


>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)

Query: 4 EEWSSW 9
EEW SW
Sbjct: 88 EEWESW 93


>sp|RPOL_BPT3|DNA-DIRECTED RNA polymerase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 4 EEWSSWN 10
E WSSW+
Sbjct: 200 EAWSSWD 206


>sp|DPOL_ADEB3|DNA polymerase|Bovine adenovirus B serotype 3

Query: 4 EEWSSW 9
++WSSW
Sbjct: 285 QKWSSW 290


>sp|PRIM_SUHVK|DNA primase|Suid herpesvirus 1 (strain Kaplan)

Query: 4 EEWSSWN 10
E+W+ W+
Sbjct: 629 EDWADWD 635


>sp|POL_SIVTN|GAG-POL polyprotein|Simian immunodeficiency virus (isolate TAN1)

Query: 1 VSVEEWSSW 9
VS E WS W
Sbjct: 1007 VSKETWSQW 1015


>sp|LT_POVS1|LARGE T antigen|Simian virus 12 (strain wt100)

Query: 4 EEWSSW 9
EEW +W
Sbjct: 88 EEWEAW 93


>sp|RPOL_BPT7|T7 RNA polymerase|Escherichia phage T7 (Bacteriophage T7)

Query: 4 EEWSSWN 10
E WSSW+
Sbjct: 199 EAWSSWH 205


>sp|ENV_FFV|ENVELOPE glycoprotein gp130|Feline foamy virus (FFV) (Feline

Query: 1 VSVEEWSSWN 10
++++EW WN
Sbjct: 7 MTLKEWMEWN 16


>sp|MATRX_DMSVA|MATRIX protein|Drosophila melanogaster sigma virus (isolate

Query: 3 VEEWSSWN 10
++EW +W+
Sbjct: 77 IKEWETWD 84


>sp|POL_IPHA|INTRACISTERNAL A-particle Pol-related polyprotein|Hamster intracisternal

Query: 3 VEEWSSW 9
+E WS+W
Sbjct: 649 LEAWSAW 655


>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)

Query: 4 EEWSSW 9
+EW SW
Sbjct: 88 DEWESW 93


>sp|PORTL_BPKHP|PORTAL protein|Helicobacter pylori bacteriophage KHP30

Query: 4 EEWSSWN 10
E+W +WN
Sbjct: 451 EKWYNWN 457


>sp|YR118_MIMIV|UNCHARACTERIZED protein R118|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 EWSSWN 10
+W++WN
Sbjct: 278 DWTTWN 283


>sp|DPOL_ADECC|DNA polymerase|Canine adenovirus serotype 1 (strain

Query: 2 SVEEWSSWN 10
+ + W +WN
Sbjct: 269 TTQNWDTWN 277


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1 VSVEEWSSW 9
++++ WS W
Sbjct: 1077 ITLQRWSLW 1085


>sp|POL_IPMAI|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 3 VEEWSSW 9
+E WS+W
Sbjct: 614 LEAWSAW 620


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1 VSVEEWSSW 9
++++ WS W
Sbjct: 1077 ITLQRWSLW 1085


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 VSVEEWSSW 9
VS+E+++ W
Sbjct: 3010 VSIEDYNRW 3018




28|SequenceR|145|136|GTSDQVSVEE

>sp|TRM1_GAHVM|TRIPARTITE terminase subunit 1|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 TSDQVSVEE 10
T+DQV VE+
Sbjct: 777 TADQVRVEQ 785




29|SequenceR|150|141|FLIDQGTSDQ

>sp|YR835_MIMIV|PUTATIVE ankyrin repeat protein R835|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FLIDQGT 7
FLID+GT
Sbjct: 237 FLIDKGT 243


>sp|MT5_MYXVL|ANKYRIN repeat domain-containing protein M-T5|Myxoma virus (strain

Query: 1 FLIDQGTS 8
++ID+GTS
Sbjct: 127 YMIDRGTS 134


>sp|TGB3_PVMR|MOVEMENT protein TGBp3|Potato virus M (strain Russian)

Query: 1 FLIDQGTSD 9
+LI QG SD
Sbjct: 17 YLISQGQSD 25


>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 FLIDQGTSD 9
F+I+ GT+D
Sbjct: 771 FIIEYGTTD 779


>sp|RDRP_ROTS1|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)

Query: 1 FLIDQGTSD 9
F+I+ GT+D
Sbjct: 771 FIIEYGTTD 779


>sp|RDRP_ROTPG|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Pig/United

Query: 1 FLIDQGTSD 9
F+I+ GT+D
Sbjct: 771 FIIEYGTTD 779


>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 1 FLIDQGTSD 9
F+I+ GT+D
Sbjct: 771 FIIEYGTTD 779


>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 FLIDQGTSD 9
F+I+ GT+D
Sbjct: 771 FIIEYGTTD 779


>sp|RDRP_ROTBU|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 1 FLIDQGTSD 9
F+I+ GT+D
Sbjct: 771 FIIEYGTTD 779


>sp|RDRP_ROTBN|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 1 FLIDQGTSD 9
F+I+ GT+D
Sbjct: 771 FIIEYGTTD 779


>sp|RDRP_ROTRF|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1])

Query: 1 FLIDQGTSD 9
F+I+ GT+D
Sbjct: 771 FIIEYGTTD 779




30|SequenceR|155|146|DKPFVFLIDQ

>sp|YR592_MIMIV|PUTATIVE helicase R592|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 KPFVFLID 9
KPFVF+I+
Sbjct: 334 KPFVFMIN 341


>sp|VG28_BPMD2|MINOR tail protein Gp28|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 KPFVFLID 9
KPF FL+D
Sbjct: 205 KPFPFLLD 212


>sp|SPI1_MYXVL|SERINE proteinase inhibitor 1|Myxoma virus (strain Lausanne) (MYXV)

Query: 1 DKPFVFLI 8
+KPF+FLI
Sbjct: 328 NKPFMFLI 335


>sp|SPI2_MYXVU|SERINE proteinase inhibitor 2|Myxoma virus (strain Uriarra) (MYXV)

Query: 1 DKPFVFLI 8
+KPF+F+I
Sbjct: 307 NKPFIFII 314


>sp|SPI2_MYXVL|SERINE proteinase inhibitor 2|Myxoma virus (strain Lausanne) (MYXV)

Query: 1 DKPFVFLI 8
+KPF+F+I
Sbjct: 307 NKPFIFII 314


>sp|NSP1_ROTRA|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Rabbit/United

Query: 3 PFVFLIDQ 10
PF F +DQ
Sbjct: 430 PFTFTLDQ 437


>sp|V040_FOWPN|UNCHARACTERIZED serpin-like protein FPV040|Fowlpox virus (strain NVSL) (FPV)

Query: 2 KPFVFLI 8
KPF+F++
Sbjct: 313 KPFIFIL 319


>sp|YL611_MIMIV|UNCHARACTERIZED protein L611|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DKPFVFLID 9
DKP V +ID
Sbjct: 817 DKPIVVVID 825


>sp|V204_FOWPN|UNCHARACTERIZED serpin-like protein FPV204|Fowlpox virus (strain NVSL) (FPV)

Query: 1 DKPFVFLI 8
+KPF+F++
Sbjct: 314 NKPFIFIV 321


>sp|EX0N_IIV3|PUTATIVE exonuclease 059L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 DKPFVFLID 9
D+PF+ L+D
Sbjct: 33 DEPFLLLLD 41


>sp|RDRP_CLBVS|RNA replication polyprotein|Citrus leaf blotch virus (isolate

Query: 2 KPFVFL 7
KPF+FL
Sbjct: 1478 KPFIFL 1483




31|SequenceR|160|151|EEVLKDKPFV

>sp|RDRP_ROTBN|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 2 EVLKDKPF 9
EV+KDKP+
Sbjct: 194 EVMKDKPY 201


>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 2 EVLKDKPF 9
EV+KDKP+
Sbjct: 194 EVMKDKPY 201


>sp|RDRP_ROTRF|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1])

Query: 2 EVLKDKPF 9
EV+KDKP+
Sbjct: 194 EVMKDKPY 201


>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 2 EVLKDKPF 9
EV+KDKP+
Sbjct: 194 EVMKDKPY 201


>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2 EVLKDKPF 9
EV+KDKP+
Sbjct: 194 EVMKDKPY 201


>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 2 EVLKDKPF 9
EV+KDKP+
Sbjct: 194 EVMKDKPY 201


>sp|RDRP_ROTPY|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Pig/Mexico/YM/1983/G11P9[7])

Query: 2 EVLKDKPF 9
EV+KDKP+
Sbjct: 194 EVMKDKPY 201


>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate

Query: 2 EVLKDKPF 9
EV+KDKP+
Sbjct: 194 EVMKDKPY 201


>sp|RDRP_ROTBU|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 2 EVLKDKPF 9
EV+KDKP+
Sbjct: 194 EVMKDKPY 201


>sp|RDRP_ROTTU|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Monkey/United

Query: 2 EVLKDKPF 9
EV+KDKP+
Sbjct: 194 EVMKDKPY 201


>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 2 EVLKDKPF 9
EV+KDKP+
Sbjct: 194 EVMKDKPY 201


>sp|RDRP_ROTPG|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Pig/United

Query: 2 EVLKDKPF 9
EV+KDKP+
Sbjct: 194 EVMKDKPY 201


>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 2 EVLKDKPF 9
EV+KDKP+
Sbjct: 194 EVMKDKPY 201


>sp|RDRP_ROTW3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 2 EVLKDKPF 9
EV+KDKP+
Sbjct: 194 EVMKDKPY 201


>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2 EVLKDKPF 9
EV+KDKP+
Sbjct: 194 EVMKDKPY 201


>sp|MVP_PPVNA|P3N-PIPO polyprotein|Plum pox potyvirus (isolate NAT)

Query: 1 EEVLKDKPFV 10
E+VLK++P++
Sbjct: 793 EQVLKEEPYL 802


>sp|MVP_PPVSK|P3N-PIPO polyprotein|Plum pox potyvirus (strain SK

Query: 1 EEVLKDKPFV 10
E+VLK++P++
Sbjct: 793 EQVLKEEPYL 802


>sp|MVP_PPVD|P3N-PIPO polyprotein|Plum pox potyvirus (strain D)

Query: 1 EEVLKDKPFV 10
E+VLK++P++
Sbjct: 794 EQVLKEEPYL 803


>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)

Query: 1 EEVLKDKPFV 10
E+VLK++P++
Sbjct: 793 EQVLKEEPYL 802


>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)

Query: 1 EEVLKDKPFV 10
E+VLK++P++
Sbjct: 793 EQVLKEEPYL 802


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 3 VLKDKPFV 10
+LKD PFV
Sbjct: 556 MLKDTPFV 563


>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)

Query: 1 EEVLKDKPFV 10
E+VLK++P++
Sbjct: 794 EQVLKEEPYL 803


>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK

Query: 1 EEVLKDKPFV 10
E+VLK++P++
Sbjct: 793 EQVLKEEPYL 802


>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo

Query: 5 KDKPFV 10
KDKPF+
Sbjct: 877 KDKPFI 882


>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)

Query: 5 KDKPFV 10
KDKPF+
Sbjct: 878 KDKPFI 883


>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)

Query: 5 KDKPFV 10
KDKPF+
Sbjct: 877 KDKPFI 882


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 5 KDKPFV 10
KDKPF+
Sbjct: 877 KDKPFI 882


>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2 EVLKDKPF 9
+V+KDKP+
Sbjct: 194 DVMKDKPY 201


>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 2 EVLKDKPF 9
+V+KDKP+
Sbjct: 194 DVMKDKPY 201


>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2 EVLKDKPF 9
+V+KDKP+
Sbjct: 194 DVMKDKPY 201


>sp|RDRP_ROTS1|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)

Query: 2 EVLKDKPF 9
+V+KDKP+
Sbjct: 194 DVMKDKPY 201


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 1 EEVLKDKPFV 10
E L+D+PFV
Sbjct: 240 ETYLQDEPFV 249


>sp|RDRP_ROTSP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Patton/G3P[X]) (RV-A)

Query: 2 EVLKDKPF 9
+V+KDKP+
Sbjct: 194 DVMKDKPY 201


>sp|RDRP_ROTSH|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Monkey/South

Query: 2 EVLKDKPF 9
+V+KDKP+
Sbjct: 194 DVMKDKPY 201


>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2 EVLKDKPF 9
+V+KDKP+
Sbjct: 194 DVMKDKPY 201


>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 2 EVLKDKPF 9
+V+KDKP+
Sbjct: 194 DVMKDKPY 201


>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2 EVLKDKPF 9
+V+KDKP+
Sbjct: 194 DVMKDKPY 201


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 3 VLKDKPFV 10
+LKD PF+
Sbjct: 556 LLKDTPFI 563


>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)

Query: 3 VLKDKPFV 10
+LKD PF+
Sbjct: 556 MLKDTPFI 563


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 3 VLKDKPFV 10
+LKD PF+
Sbjct: 555 LLKDTPFI 562


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 3 VLKDKPFV 10
+LKD PF+
Sbjct: 554 MLKDTPFI 561


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 3 VLKDKPFV 10
+LKD PF+
Sbjct: 556 LLKDTPFI 563


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 3 VLKDKPFV 10
+LKD PF+
Sbjct: 555 MLKDTPFI 562


>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain

Query: 2 EVLKDKPFV 10
EV+K+ P+V
Sbjct: 342 EVIKENPYV 350


>sp|POLG_SVDVU|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 3 VLKDKPFV 10
+LKD PF+
Sbjct: 554 MLKDTPFI 561


>sp|POLG_SVDVH|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 3 VLKDKPFV 10
+LKD PF+
Sbjct: 554 MLKDTPFI 561


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 3 VLKDKPFV 10
+LKD PF+
Sbjct: 555 MLKDTPFI 562


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 3 VLKDKPFV 10
+LKD PF+
Sbjct: 556 MLKDTPFI 563


>sp|RDRP_ROTPC|RNA-DIRECTED RNA polymerase|Rotavirus C (strain RVC/Pig/United

Query: 2 EVLKDKPF 9
E +KDKP+
Sbjct: 192 ETMKDKPY 199


>sp|GG_HHV11|ENVELOPE glycoprotein G|Human herpesvirus 1 (strain 17)

Query: 1 EEVLKDKP 8
E+V KDKP
Sbjct: 115 EDVEKDKP 122




32|SequenceR|165|156|TVNTGEEVLK

>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)

Query: 2 VNTGEEVL 9
+N+GEE+L
Sbjct: 115 LNSGEEIL 122


>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 VNTGEEVL 9
+N+GEE+L
Sbjct: 115 LNSGEEIL 122


>sp|088R_FRG3G|PUTATIVE FAD-linked sulfhydryl oxidase 088R|Frog virus 3 (isolate Goorha)

Query: 1 TVNTGEEVLK 10
+VNTG++V +
Sbjct: 92 SVNTGDKVFR 101




33|SequenceR|170|161|SVYCITVNTG

>sp|DPOL_BPSPB|DNA-DIRECTED DNA polymerase|Bacillus phage SPbeta (Bacillus phage

Query: 4 CITVNTG 10
C+TVN+G
Sbjct: 877 CLTVNSG 883


>sp|Y024_OSHVF|UNCHARACTERIZED protein ORF24|Ostreid herpesvirus 1 (isolate France)

Query: 3 YCITVN 8
YC+T+N
Sbjct: 104 YCVTIN 109


>sp|VLF1_NPVOP|VERY late expression factor 1|Orgyia pseudotsugata multicapsid

Query: 2 VYCITVNTG 10
V+CI + TG
Sbjct: 200 VFCIMLGTG 208


>sp|VLF1_NPVHZ|VERY late expression factor 1|Heliothis zea nuclear polyhedrosis virus

Query: 2 VYCITVNTG 10
V+CI + TG
Sbjct: 204 VFCIMLGTG 212


>sp|VLF1_NPVAC|VERY late expression factor 1|Autographa californica nuclear

Query: 2 VYCITVNTG 10
V+CI + TG
Sbjct: 200 VFCIMLGTG 208


>sp|VF199_ASFK5|INNER membrane protein E199L|African swine fever virus (isolate

Query: 1 SVYCITVNTG 10
S YC VN+G
Sbjct: 72 SQYCACVNSG 81


>sp|VF199_ASFB7|INNER membrane protein E199L|African swine fever virus (strain

Query: 1 SVYCITVNTG 10
S YC VN+G
Sbjct: 72 SQYCACVNSG 81


>sp|VF199_ASFP4|INNER membrane protein E199L|African swine fever virus (isolate

Query: 1 SVYCITVNTG 10
S YC VN+G
Sbjct: 72 SQYCACVNSG 81


>sp|VF199_ASFWA|INNER membrane protein E199L|African swine fever virus (isolate

Query: 1 SVYCITVNTG 10
S YC VN+G
Sbjct: 72 SQYCACVNSG 81


>sp|UL92_EHV2|GENE 31 protein|Equine herpesvirus 2 (strain 86/87)

Query: 4 CITVNTG 10
CI VNTG
Sbjct: 117 CIVVNTG 123




34|SequenceR|175|166|NQINRSVYCI

>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 1 NQINRSVYCI 10
N NR+ YC+
Sbjct: 323 NMSNRTRYCL 332


>sp|CAPSD_GLVWB|MAJOR capsid protein|Giardia lamblia virus (isolate Wang)

Query: 1 NQINRSVYCI 10
N NR+ YC+
Sbjct: 323 NMSNRTRYCL 332




35|SequenceR|180|171|YCSVNNQINR

>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 3 SVNNQINR 10
+VNNQ+NR
Sbjct: 576 TVNNQVNR 583


>sp|VP2_BTV17|OUTER capsid protein VP2|Bluetongue virus 17 (isolate USA)

Query: 1 YCSVNNQI 8
YCSVN+Q+
Sbjct: 125 YCSVNHQL 132


>sp|VP2_BTV10|OUTER capsid protein VP2|Bluetongue virus 10 (isolate USA)

Query: 1 YCSVNNQI 8
+CSVN+Q+
Sbjct: 125 HCSVNHQL 132


>sp|VG64_ICHVA|UNCHARACTERIZED protein ORF64|Ictalurid herpesvirus 1 (strain Auburn)

Query: 4 VNNQINR 10
VNN INR
Sbjct: 281 VNNMINR 287


>sp|PP62_ASFM2|POLYPROTEIN pp62|African swine fever virus (isolate

Query: 1 YCSVNN 6
+CSVNN
Sbjct: 193 WCSVNN 198


>sp|PP62_ASFK5|POLYPROTEIN pp62|African swine fever virus (isolate

Query: 1 YCSVNN 6
+CSVNN
Sbjct: 193 WCSVNN 198


>sp|PP62_ASFWA|POLYPROTEIN pp62|African swine fever virus (isolate

Query: 1 YCSVNN 6
+CSVNN
Sbjct: 193 WCSVNN 198


>sp|PP62_ASFP4|POLYPROTEIN pp62|African swine fever virus (isolate

Query: 1 YCSVNN 6
+CSVNN
Sbjct: 193 WCSVNN 198


>sp|PP62_ASFB7|POLYPROTEIN pp62|African swine fever virus (strain

Query: 1 YCSVNN 6
+CSVNN
Sbjct: 193 WCSVNN 198


>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 YCSVNNQ 7
YC VNN+
Sbjct: 438 YCVVNNR 444


>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 YCSVNNQ 7
YC VNN+
Sbjct: 438 YCVVNNR 444


>sp|TRM1_SHV21|TRIPARTITE terminase subunit 1|Saimiriine herpesvirus 2 (strain 11)

Query: 2 CSVNNQI 8
CS++NQI
Sbjct: 245 CSIDNQI 251


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 3 SVNNQIN 9
S+NNQIN
Sbjct: 91 SINNQIN 97




36|SequenceR|185|176|QKGELYCSVN

>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)

Query: 1 QKGELYCSVN 10
Q ELYCSV+
Sbjct: 290 QGDELYCSVH 299


>sp|V19_SPTNK|STRUCTURAL protein V19|Sputnik virophage

Query: 4 ELYCSVN 10
E+YC+VN
Sbjct: 32 EIYCNVN 38


>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)

Query: 2 KGELYCSV 9
KGE YC V
Sbjct: 468 KGEAYCVV 475


>sp|VF201_IIV3|PUTATIVE Bro-N domain-containing protein 019R|Invertebrate iridescent virus

Query: 3 GELYCSV 9
ELYCS+
Sbjct: 264 AELYCSI 270


>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus

Query: 2 KGELYC 7
KG LYC
Sbjct: 789 KGHLYC 794


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 QKGELYCSVN 10
Q + YCSVN
Sbjct: 3444 QLTDKYCSVN 3453




37|SequenceR|190|181|QEGHIQKGEL

>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5

Query: 2 EGHIQKGEL 10
EGH +KG L
Sbjct: 107 EGHFKKGPL 115


>sp|DPOL_ADEB2|DNA polymerase|Bovine adenovirus 2 (BAdV-2) (Mastadenovirus

Query: 3 GHIQKGEL 10
GH+ KG+L
Sbjct: 908 GHVGKGKL 915


>sp|VE2_HPV5B|REGULATORY protein E2|Human papillomavirus type 5b

Query: 2 EGHIQKG 8
EGH +KG
Sbjct: 107 EGHFKKG 113




38|SequenceR|195|186|VHPDLQEGHI

>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 3 PDLQEGH 9
PDL++GH
Sbjct: 75 PDLRKGH 81


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 3 PDLQEGH 9
PDL++GH
Sbjct: 75 PDLRKGH 81


>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)

Query: 1 VHPDLQ 6
+HPDLQ
Sbjct: 494 LHPDLQ 499


>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)

Query: 1 VHPDLQ 6
+HPDLQ
Sbjct: 494 LHPDLQ 499


>sp|TRM3_EHV2|TRIPARTITE terminase subunit 3|Equine herpesvirus 2 (strain 86/87)

Query: 1 VHPDLQEGHI 10
+HP ++E H+
Sbjct: 536 LHPFVREAHV 545


>sp|POLS_AURAV|STRUCTURAL polyprotein|Aura virus (AURAV)

Query: 1 VHPDLQEGHI 10
V P++QEG I
Sbjct: 400 VPPEIQEGAI 409


>sp|Y04O_BPT4|UNCHARACTERIZED 36.3 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 HPDLQEGH 9
H D Q+GH
Sbjct: 18 HRDYQKGH 25


>sp|LTP_MHV68|LARGE tegument protein deneddylase|Murid herpesvirus 4 (MuHV-4) (Murine

Query: 2 HPDLQE 7
HPDLQ+
Sbjct: 1190 HPDLQK 1195




39|SequenceR|200|191|LNFATVHPDL

>sp|TSP_BPSAV|TAIL sheath protein|Salmonella phage ViI

Query: 1 LNFATVHPDL 10
L+FA V PD+
Sbjct: 607 LDFAAVRPDM 616


>sp|L_SV41|RNA-DIRECTED RNA polymerase L|Simian virus 41 (SV41)

Query: 3 FATVHPDL 10
F T+HPD+
Sbjct: 2027 FTTIHPDV 2034


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 3 FATVHPDL 10
F T+HPD+
Sbjct: 2020 FTTIHPDV 2027


>sp|SCAF_ALHV1|CAPSID scaffolding protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 LNFATVHPDL 10
L+ ++VHPDL
Sbjct: 115 LSLSSVHPDL 124


>sp|096R_FRG3G|UNCHARACTERIZED protein 096R|Frog virus 3 (isolate Goorha)

Query: 2 NFATVHPD 9
N +T+HPD
Sbjct: 81 NVSTLHPD 88


>sp|NCTSP_BPN4|NON-CONTRACTILE tail sheath|Enterobacteria phage N4 (Bacteriophage N4)

Query: 1 LNFATVHP 8
+N+A VHP
Sbjct: 475 INYAGVHP 482


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 2 NFATVHPDL 10
NF +HP+L
Sbjct: 209 NFLLIHPEL 217


>sp|POLG_AEVVR|GENOME polyprotein|Avian encephalomyelitis virus (strain Van

Query: 3 FATVHP 8
F+TVHP
Sbjct: 333 FSTVHP 338


>sp|PORTL_EHV1V|PORTAL protein|Equine herpesvirus 1 (strain V592)

Query: 4 ATVHPDL 10
ATVHP L
Sbjct: 207 ATVHPKL 213


>sp|PORTL_EHV1B|PORTAL protein|Equine herpesvirus 1 (strain Ab4p)

Query: 4 ATVHPDL 10
ATVHP L
Sbjct: 207 ATVHPKL 213


>sp|VU84_HHV6Z|PROTEIN U84|Human herpesvirus 6B (strain Z29)

Query: 1 LNFATVHPD 9
+NFA HP+
Sbjct: 295 INFAICHPN 303


>sp|POLN_AURAV|POLYPROTEIN P1234|Aura virus (AURAV)

Query: 2 NFATVHPDL 10
NF+ VHP L
Sbjct: 2248 NFSYVHPVL 2256


>sp|SHUT_GAHVM|VIRION host shutoff protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 LNFATVHPDL 10
LNF H DL
Sbjct: 237 LNFVRCHTDL 246


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1 LNFATVHPD 9
+N VHPD
Sbjct: 1507 VNLTRVHPD 1515


>sp|VF453_IIV3|PUTATIVE thioredoxin-like protein 041R|Invertebrate iridescent virus 3

Query: 2 NFATVHPDL 10
NFA HP++
Sbjct: 60 NFARKHPEI 68


>sp|SCAF_EHV2|CAPSID scaffolding protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 LNFATVHPD 9
L+ +++HPD
Sbjct: 150 LSLSSIHPD 158




40|SequenceR|205|196|FPVSNLNFAT

>sp|POL1_BAYMG|GENOME polyprotein 1|Barley yellow mosaic virus (isolate

Query: 1 FPVSNLNFAT 10
FP+S+ NFAT
Sbjct: 688 FPLSSDNFAT 697


>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky

Query: 2 PVSNLNFAT 10
P+SN NF T
Sbjct: 48 PISNTNFLT 56


>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 2 PVSNLNFAT 10
P+SN NF T
Sbjct: 48 PISNTNFLT 56


>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 2 PVSNLNFAT 10
P+SN NF T
Sbjct: 48 PISNTNFLT 56


>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 2 PVSNLNFAT 10
P+SN NF T
Sbjct: 48 PISNTNFLT 56


>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 2 PVSNLNFAT 10
P+SN NF T
Sbjct: 48 PISNTNFLT 56


>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005

Query: 2 PVSNLNFAT 10
P+SN NF T
Sbjct: 40 PISNTNFLT 48


>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004

Query: 2 PVSNLNFAT 10
P+SN NF T
Sbjct: 48 PISNTNFLT 56


>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea

Query: 2 PVSNLNFAT 10
P+SN NF T
Sbjct: 48 PISNTNFLT 56


>sp|VP1_POVMK|MAJOR capsid protein VP1|Murine polyomavirus (strain Kilham) (MPyV)

Query: 1 FPVSNLNF 8
FPV LNF
Sbjct: 141 FPVQGLNF 148




41|SequenceR|210|201|GKNRIFPVSN

>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 2 KNRIFPVSN 10
KN++FP+ N
Sbjct: 1582 KNKVFPIEN 1590


>sp|LMBD2_REOVD|OUTER capsid protein lambda-2|Reovirus type 3 (strain Dearing)

Query: 4 RIFPVSN 10
RI+P+SN
Sbjct: 99 RIYPISN 105


>sp|LMBD2_REOVL|OUTER capsid protein lambda-2|Reovirus type 1 (strain Lang)

Query: 4 RIFPVSN 10
RI+P+SN
Sbjct: 99 RIYPISN 105


>sp|YR748_MIMIV|PUTATIVE ankyrin repeat protein R748|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 KNRIFPVSN 10
KNRIFP N
Sbjct: 235 KNRIFPTIN 243


>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 1 GKNRIFPVS 9
GK RIF +S
Sbjct: 2574 GKTRIFSIS 2582


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 2 KNRIFPV 8
KN++FP+
Sbjct: 1573 KNKVFPI 1579


>sp|RDRP_SSDRV|RNA replication protein|Sclerotinia sclerotiorum

Query: 1 GKNRIFPVSN 10
GKN I P+++
Sbjct: 785 GKNLILPITD 794


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 2 KNRIFPV 8
KN++FP+
Sbjct: 1574 KNKVFPI 1580


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 2 KNRIFPVS 9
KNR FP++
Sbjct: 914 KNRYFPIT 921


>sp|YL452_MIMIV|UNCHARACTERIZED protein L452|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GKNRIFP 7
GKN+++P
Sbjct: 412 GKNQVYP 418


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1 GKNRIFPV 8
G N IFPV
Sbjct: 605 GNNPIFPV 612


>sp|DNBI_SUHV|MAJOR DNA-binding protein|Suid herpesvirus 1 (SuHV-1) (Pseudorabies

Query: 1 GKNRIFPVSN 10
G NR+F N
Sbjct: 976 GNNRVFQAGN 985


>sp|YL264_MIMIV|UNCHARACTERIZED WD repeat-containing protein L264|Acanthamoeba polyphaga mimivirus

Query: 1 GKNRIFPVSN 10
G IFPV+N
Sbjct: 625 GDQNIFPVNN 634


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1 GKNRIFPV 8
G N IFPV
Sbjct: 605 GNNPIFPV 612


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 1 GKNRIFPVSN 10
G NR+F N
Sbjct: 994 GNNRVFQAGN 1003


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 GKNRIFPVSN 10
G NR+F N
Sbjct: 994 GNNRVFQAGN 1003


>sp|YR118_MIMIV|UNCHARACTERIZED protein R118|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 KNRIFPV 8
KNR++P+
Sbjct: 67 KNRLYPI 73


>sp|YORP_TTV1K|UNCHARACTERIZED 20.2 kDa protein|Thermoproteus tenax virus 1 (strain

Query: 1 GKNRIFPV 8
G NR+FP+
Sbjct: 66 GLNRLFPM 73




42|SequenceR|215|206|CYINTGKNRI

>sp|GAM1_ADEG1|PROTEIN GAM-1|Fowl adenovirus A serotype 1

Query: 1 CYINTGKN 8
C I TGKN
Sbjct: 216 CAIKTGKN 223


>sp|US02_HCMVT|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain Towne)

Query: 1 CYINTGK 7
CYI+ GK
Sbjct: 52 CYIDNGK 58


>sp|US02_HCMVM|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain Merlin)

Query: 1 CYINTGK 7
CYI+ GK
Sbjct: 52 CYIDNGK 58


>sp|US02_HCMVA|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain AD169)

Query: 1 CYINTGK 7
CYI+ GK
Sbjct: 52 CYIDNGK 58


>sp|RSAMI_BPPM6|RADICAL SAM Nalpha-GlyT isomerase|Pseudomonas phage M6

Query: 1 CYINTG 6
CY+N+G
Sbjct: 132 CYVNSG 137


>sp|MCP_EHV2|MAJOR capsid protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 YINTGKNRI 10
++N KNRI
Sbjct: 1030 FVNQAKNRI 1038


>sp|MCE_PBCV1|MRNA-CAPPING enzyme|Paramecium bursaria Chlorella virus 1

Query: 3 INTGKN 8
INTGKN
Sbjct: 6 INTGKN 11


>sp|DPOL_BPE32|DNA-DIRECTED DNA polymerase|Escherichia phage Phieco32 (Escherichia coli

Query: 1 CYINTGKNRI 10
CYI G N I
Sbjct: 335 CYIRKGTNVI 344


>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5

Query: 1 CYINTG 6
CYIN G
Sbjct: 516 CYINLG 521


>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2

Query: 1 CYINTG 6
CYIN G
Sbjct: 532 CYINLG 537


>sp|POL_FMVD|ENZYMATIC polyprotein|Figwort mosaic virus (strain DxS)

Query: 1 CYINTG 6
CY++TG
Sbjct: 51 CYVDTG 56


>sp|POL_CERV|ENZYMATIC polyprotein|Carnation etched ring virus (CERV)

Query: 1 CYINTGKN 8
CY++TG +
Sbjct: 31 CYVDTGSS 38


>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 YINTGKNR 9
YIN KNR
Sbjct: 385 YINMNKNR 392


>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain

Query: 2 YINTGKNR 9
Y+N G+NR
Sbjct: 229 YLNDGRNR 236


>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6

Query: 1 CYINTG 6
CYIN G
Sbjct: 407 CYINLG 412




43|SequenceR|220|211|GQSAECYINT

>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2

Query: 1 GQSAECYINT 10
G SA C INT
Sbjct: 2164 GCSATCIINT 2173


>sp|CAPSD_SCPMV|CAPSID protein|Southern cowpea mosaic virus (SCPMV)

Query: 1 GQSAECYIN 9
GQS C++N
Sbjct: 183 GQSGLCFVN 191


>sp|VG34_ICHVA|UNCHARACTERIZED protein ORF34|Ictalurid herpesvirus 1 (strain Auburn)

Query: 5 ECYINT 10
EC+INT
Sbjct: 267 ECFINT 272


>sp|GSTA_BPT4|DNA alpha-glucosyltransferase|Enterobacteria phage T4 (Bacteriophage

Query: 1 GQSAECYINT 10
Q +CYIN+
Sbjct: 269 AQILDCYINS 278




44|SequenceR|225|216|GESVNGQSAE

***** No hits found ******


45|SequenceR|230|221|VIGKMGESVN

>sp|UBC4_MIMIV|PROBABLE bifunctional E2/E3 enzyme R795|Acanthamoeba polyphaga mimivirus

Query: 2 IGKMGESVN 10
+GK+GE N
Sbjct: 1052 LGKIGEKTN 1060




46|SequenceR|235|226|KSVFLVIGKM

***** No hits found ******


47|SequenceR|240|231|PEELVKSVFL

>sp|PK_BPT7|PROTEIN kinase 0.7|Escherichia phage T7 (Bacteriophage T7)

Query: 1 PEELVKSV 8
PEEL+K V
Sbjct: 230 PEELIKEV 237


>sp|POL2_BPMV|RNA2 polyprotein|Bean-pod mottle virus (strain Kentucky

Query: 1 PEELVKSVFL 10
PE V+S+F+
Sbjct: 258 PENAVRSIFV 267




48|SequenceR|245|236|CSFDKPEELV

>sp|YR366_MIMIV|PUTATIVE ATP-dependent RNA helicase R366|Acanthamoeba polyphaga mimivirus

Query: 2 SFDKPEELV 10
S DKP+EL+
Sbjct: 68 SIDKPDELL 76


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 CSFDKPEE 8
C+FD P++
Sbjct: 1681 CTFDNPDD 1688


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 CSFDKPEE 8
C+FD P++
Sbjct: 1688 CTFDNPDD 1695


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 CSFDKPEE 8
C+FD P++
Sbjct: 1681 CTFDNPDD 1688


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 CSFDKPEE 8
C+FD P++
Sbjct: 1688 CTFDNPDD 1695


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 CSFDKPE 7
C FD PE
Sbjct: 1320 CEFDSPE 1326


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 CSFDKPE 7
C FD PE
Sbjct: 1320 CEFDSPE 1326


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 CSFDKPE 7
C FD PE
Sbjct: 1290 CEFDSPE 1296


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 CSFDKPE 7
C FD PE
Sbjct: 1320 CEFDSPE 1326


>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)

Query: 3 FDKPEEL 9
++KPEEL
Sbjct: 765 YEKPEEL 771


>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)

Query: 3 FDKPEEL 9
++KPEEL
Sbjct: 765 YEKPEEL 771


>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1

Query: 1 CSFDKPEEL 9
CSF P EL
Sbjct: 149 CSFKVPTEL 157


>sp|RDRP_FXMV|RNA replication protein|Foxtail mosaic virus

Query: 2 SFDKPEELV 10
SFD PE +V
Sbjct: 265 SFDMPEPMV 273


>sp|V10_SPTNK|PUTATIVE integrase V10|Sputnik virophage

Query: 1 CSFDKPEELV 10
C FD P + V
Sbjct: 152 CEFDSPRKRV 161


>sp|Y326A_ATV|STRUCTURAL protein ORF326a|Acidianus two-tailed virus (ATV)

Query: 2 SFDKPEELV 10
SF+ PE+LV
Sbjct: 307 SFNVPEQLV 315


>sp|YL265_MIMIV|UNCHARACTERIZED protein L265|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 FDKPEELV 10
F KPE+L+
Sbjct: 184 FKKPEQLI 191


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 CSFDKPEE 8
CSF P+E
Sbjct: 939 CSFSAPDE 946


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 CSFDKPEE 8
CSF P+E
Sbjct: 939 CSFSAPDE 946


>sp|YR563_MIMIV|PUTATIVE ATP-dependent RNA helicase R563|Acanthamoeba polyphaga mimivirus

Query: 3 FDKPEEL 9
FDKP E+
Sbjct: 217 FDKPNEI 223


>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)

Query: 3 FDKPEE 8
FDKP+E
Sbjct: 195 FDKPQE 200


>sp|PCNA2_PBCV1|PROBABLE DNA polymerase sliding clamp|Paramecium bursaria Chlorella virus 1

Query: 2 SFDKPEELV 10
++D P+EL+
Sbjct: 106 TYDNPDELI 114




49|SequenceR|250|241|FDETECSFDK

>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)

Query: 1 FDETECSF 8
FDE+ C+F
Sbjct: 329 FDESSCTF 336


>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)

Query: 1 FDETECSF 8
FDE+ C+F
Sbjct: 329 FDESSCTF 336


>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)

Query: 1 FDETECSF 8
FDE+ C+F
Sbjct: 329 FDESSCTF 336


>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)

Query: 1 FDETECSF 8
FDE+ C+F
Sbjct: 329 FDESSCTF 336


>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)

Query: 1 FDETECSF 8
FDE+ C+F
Sbjct: 332 FDESSCTF 339


>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)

Query: 1 FDETECSF 8
FDE+ C+F
Sbjct: 329 FDESSCTF 336


>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)

Query: 1 FDETECSF 8
FDE+ C+F
Sbjct: 329 FDESSCTF 336


>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)

Query: 1 FDETECSF 8
FDE+ C+F
Sbjct: 329 FDESSCTF 336


>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1 FDETECSF 8
FDE+ C+F
Sbjct: 329 FDESSCTF 336


>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1 FDETECSF 8
FDE+ C+F
Sbjct: 329 FDESSCTF 336


>sp|L_MOKV|LARGE structural protein|Mokola virus (MOKV)

Query: 2 DETECSFD 9
+ET CSFD
Sbjct: 780 EETMCSFD 787


>sp|FUS_RINDR|FUSION glycoprotein F0|Rinderpest virus (strain RBOK) (RDV)

Query: 1 FDETECSF 8
FD+T C+F
Sbjct: 325 FDDTPCAF 332


>sp|FUS_RINDL|FUSION glycoprotein F0|Rinderpest virus (strain L) (RDV)

Query: 1 FDETECSF 8
FD+T C+F
Sbjct: 325 FDDTPCAF 332


>sp|FUS_RINDK|FUSION glycoprotein F0|Rinderpest virus (strain Kabete O)

Query: 1 FDETECSF 8
FD+T C+F
Sbjct: 325 FDDTPCAF 332


>sp|FUS_RINDB|FUSION glycoprotein F0|Rinderpest virus (strain RBT1) (RDV)

Query: 1 FDETECSF 8
FD+T C+F
Sbjct: 325 FDDTPCAF 332


>sp|GLYCO_LNYV3|GLYCOPROTEIN necrotic yellows virus (isolate

Query: 1 FDETECSFD 9
+D+T+C FD
Sbjct: 203 YDDTKCPFD 211


>sp|S9_DPIRV|UNCHARACTERIZED protein S9|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)

Query: 1 FDETECSFDK 10
FD+ E +FDK
Sbjct: 50 FDQPETTFDK 59


>sp|DEPOL_BPK74|DEPOLYMERASE, capsule K2-specific|Klebsiella phage vB_KpnP_KpV74 (Bacteriophage

Query: 5 ECSFDK 10
EC+FDK
Sbjct: 220 ECTFDK 225


>sp|FUS_PHODV|FUSION glycoprotein F0|Phocine distemper virus (PDV)

Query: 1 FDETECSF 8
FDE+ C F
Sbjct: 316 FDESSCVF 323


>sp|FUS_CDVO|FUSION glycoprotein F0|Canine distemper virus (strain Onderstepoort)

Query: 1 FDETECSF 8
FDE+ C F
Sbjct: 441 FDESSCVF 448


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 2 DETECSFD 9
+ET CS+D
Sbjct: 780 EETMCSYD 787


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 2 DETECSFD 9
+ET CS+D
Sbjct: 781 EETMCSYD 788


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 2 DETECSFD 9
+ET CS+D
Sbjct: 780 EETMCSYD 787


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 2 DETECSFD 9
+ET CS+D
Sbjct: 780 EETMCSYD 787


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 2 DETECSFD 9
+ET CS+D
Sbjct: 781 EETMCSYD 788


>sp|L_EBLV1|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 1 (strain

Query: 2 DETECSFD 9
+ET CS+D
Sbjct: 780 EETMCSYD 787


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 2 DETECSFD 9
+ET CS+D
Sbjct: 780 EETMCSYD 787


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 2 DETECSFD 9
+ET CS+D
Sbjct: 780 EETMCSYD 787


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 2 DETECSFD 9
+ET CS+D
Sbjct: 780 EETMCSYD 787


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 2 DETECSFD 9
+ET CS+D
Sbjct: 780 EETMCSYD 787


>sp|L_EBLV2|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 2 (strain

Query: 2 DETECSFD 9
+ET CS+D
Sbjct: 780 EETMCSYD 787


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 2 DETECSFD 9
+ET CS+D
Sbjct: 780 EETMCSYD 787


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 2 DETECSFD 9
+ET CS+D
Sbjct: 780 EETMCSYD 787


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 2 DETECSFD 9
+ET CS+D
Sbjct: 780 EETMCSYD 787


>sp|P8_RGDV|OUTER capsid protein P8|Rice gall dwarf virus (RGDV)

Query: 4 TECSFD 9
T+CSFD
Sbjct: 21 TKCSFD 26


>sp|MVP_TOML2|MOVEMENT protein|Tomato mosaic virus (strain LII)

Query: 1 FDETECSFD 9
FDE E FD
Sbjct: 239 FDEVEKEFD 247


>sp|VNS2_DSDNV|NON-STRUCTURAL protein NS2|Diatraea saccharalis densovirus (DsDNV)

Query: 2 DETECS 7
DET+CS
Sbjct: 119 DETDCS 124


>sp|VNS2_JDNVP|PUTATIVE non-structural protein NS2|Junonia coenia densovirus (isolate

Query: 2 DETECS 7
DET+CS
Sbjct: 119 DETDCS 124


>sp|HELI_ICHVA|PROBABLE ATP-dependent helicase 25|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 FDETECSFD 9
F+E +C FD
Sbjct: 99 FEEFKCLFD 107


>sp|MVP_TOML|MOVEMENT protein|Tomato mosaic virus (strain L)

Query: 1 FDETECSFD 9
FDE E FD
Sbjct: 239 FDEVEKEFD 247


>sp|MVP_TOMK2|MOVEMENT protein|Tomato mosaic virus (strain Kazakh

Query: 1 FDETECSFD 9
FDE E FD
Sbjct: 239 FDEVEKEFD 247


>sp|MVP_TOMK1|MOVEMENT protein|Tomato mosaic virus (strain Kazakh

Query: 1 FDETECSFD 9
FDE E FD
Sbjct: 239 FDEVEKEFD 247


>sp|MVP_TOMS1|MOVEMENT protein|Tomato mosaic virus (strain S-1)

Query: 1 FDETECSFD 9
FDE E FD
Sbjct: 239 FDEVEKEFD 247


>sp|ICP27_PSHV1|MRNA export factor|Psittacid herpesvirus 1 (isolate Amazon

Query: 4 TECSFDK 10
T CSFD+
Sbjct: 470 TNCSFDE 476


>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 FDETECSFDK 10
F + EC FDK
Sbjct: 164 FLDIECHFDK 173


>sp|DPOL_VARV|DNA polymerase|Variola virus

Query: 1 FDETECSFDK 10
F + EC FDK
Sbjct: 164 FLDIECHFDK 173


>sp|DPOL_VACCW|DNA polymerase|Vaccinia virus (strain Western Reserve)

Query: 1 FDETECSFDK 10
F + EC FDK
Sbjct: 164 FLDIECHFDK 173


>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 FDETECSFDK 10
F + EC FDK
Sbjct: 164 FLDIECHFDK 173


>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)

Query: 1 FDETECSFDK 10
F + EC FDK
Sbjct: 164 FLDIECHFDK 173


>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)

Query: 1 FDETECSFDK 10
F + EC FDK
Sbjct: 164 FLDIECHFDK 173




50|SequenceR|255|246|CHLTKFDETE

>sp|G_BPG4|MAJOR spike protein G|Escherichia phage G4 (Bacteriophage G4)

Query: 1 CHLTKFDET 9
CH+ + DET
Sbjct: 57 CHVVRIDET 65


>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58

Query: 2 HLTKFDETE 10
+L KFD+TE
Sbjct: 149 YLNKFDDTE 157


>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52

Query: 3 LTKFDETE 10
L KFD+TE
Sbjct: 152 LNKFDDTE 159


>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31

Query: 3 LTKFDETE 10
L KFD+TE
Sbjct: 124 LNKFDDTE 131


>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67

Query: 3 LTKFDETE 10
L KFD+TE
Sbjct: 153 LNKFDDTE 160


>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33

Query: 3 LTKFDETE 10
L KFD+TE
Sbjct: 124 LNKFDDTE 131


>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43

Query: 2 HLTKFDETE 10
+L K+D+TE
Sbjct: 148 YLNKYDDTE 156




51|SequenceR|260|251|GPDWTCHLTK

>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 1 GPDWTC 6
GP WTC
Sbjct: 981 GPVWTC 986


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 1 GPDWTC 6
GP WTC
Sbjct: 981 GPVWTC 986


>sp|VF175_ASFK5|UNCHARACTERIZED protein B175L|African swine fever virus (isolate

Query: 4 WTCHL 8
WTCHL
Sbjct: 62 WTCHL 66


>sp|UL49_EHV2|UNCHARACTERIZED gene 66 protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 PDWTCHLTK 10
P+W H+T+
Sbjct: 64 PEWVAHITR 72


>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3

Query: 2 PDWTCHLTK 10
P WT HLTK
Sbjct: 323 PGWTRHLTK 331


>sp|VF175_ASFM2|UNCHARACTERIZED protein B175L|African swine fever virus (isolate

Query: 4 WTCHL 8
WTCHL
Sbjct: 62 WTCHL 66


>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)

Query: 1 GPDWTCH 7
G DWT H
Sbjct: 802 GADWTVH 808


>sp|VF175_ASFWA|UNCHARACTERIZED protein B175L|African swine fever virus (isolate

Query: 4 WTCHL 8
WTCHL
Sbjct: 62 WTCHL 66


>sp|VF175_ASFP4|UNCHARACTERIZED protein B175L|African swine fever virus (isolate

Query: 4 WTCHL 8
WTCHL
Sbjct: 62 WTCHL 66


>sp|VNS2_EHDV2|NON-STRUCTURAL protein NS2|Epizootic hemorrhagic disease virus 2

Query: 3 DWTCHLTK 10
DWTC K
Sbjct: 202 DWTCETQK 209


>sp|VF175_ASFB7|UNCHARACTERIZED protein B175L|African swine fever virus (strain

Query: 4 WTCHL 8
WTCHL
Sbjct: 62 WTCHL 66


>sp|VNS1_BTV1A|NON-STRUCTURAL protein NS1|Bluetongue virus 1 (isolate Australia)

Query: 2 PDWTC-HLTK 10
P WTC HL +
Sbjct: 26 PQWTCSHLKR 35


>sp|VNS1_BTV11|NON-STRUCTURAL protein NS1|Bluetongue virus 11 (isolate USA)

Query: 2 PDWTC-HLTK 10
P WTC HL +
Sbjct: 26 PQWTCSHLKR 35


>sp|LTP_SHV21|LARGE tegument protein deneddylase|Saimiriine herpesvirus 2 (strain 11)

Query: 1 GPDWTCHL 8
GP W C +
Sbjct: 95 GPKWACFI 102


>sp|VNS1_BTV20|NON-STRUCTURAL protein NS1|Bluetongue virus 20 (isolate Australia)

Query: 2 PDWTC-HLTK 10
P WTC HL +
Sbjct: 26 PQWTCSHLKR 35


>sp|VNS1_BTV17|NON-STRUCTURAL protein NS1|Bluetongue virus 17 (isolate USA)

Query: 2 PDWTC-HLTK 10
P WTC HL +
Sbjct: 26 PQWTCSHLKR 35


>sp|VNS1_BTV2A|NON-STRUCTURAL protein NS1|Bluetongue virus 2 (isolate USA)

Query: 2 PDWTC-HLTK 10
P WTC HL +
Sbjct: 26 PQWTCSHLKR 35


>sp|VNS1_BTV13|NON-STRUCTURAL protein NS1|Bluetongue virus 13 (isolate USA)

Query: 2 PDWTC-HLTK 10
P WTC HL +
Sbjct: 26 PQWTCSHLKR 35


>sp|VF345_ASFB7|PROTEIN D345L|African swine fever virus (strain

Query: 2 PDWTCHLT 9
PD CHLT
Sbjct: 107 PDGFCHLT 114


>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12

Query: 2 PDWTCHLT 9
PDW H T
Sbjct: 291 PDWIAHQT 298


>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25

Query: 2 PDWTCHLT 9
PDW H T
Sbjct: 291 PDWIAHQT 298


>sp|VNS1_BTV10|NON-STRUCTURAL protein NS1|Bluetongue virus 10 (isolate USA)

Query: 2 PDWTC-HLTK 10
P WTC HL +
Sbjct: 26 PQWTCSHLKR 35


>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14

Query: 2 PDWTCHLT 9
PDW H T
Sbjct: 292 PDWMAHQT 299


>sp|VNS1_BTV1S|NON-STRUCTURAL protein NS1|Bluetongue virus 1 (isolate South

Query: 2 PDWTC-HLTK 10
P WTC HL +
Sbjct: 26 PQWTCSHLKR 35


>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8

Query: 2 PDWTCHLT 9
PDW H T
Sbjct: 290 PDWIAHQT 297


>sp|VNS1_EHDV2|NON-STRUCTURAL protein NS1|Epizootic hemorrhagic disease virus 2

Query: 2 PDWTC-HLTK 10
P WTC HL +
Sbjct: 26 PQWTCSHLRR 35


>sp|GES_BPD10|D108-SPECIFIC protein|Escherichia phage D108 (Bacteriophage D108)

Query: 4 WTCH 7
WTCH
Sbjct: 61 WTCH 64


>sp|YL016_MIMIV|UNCHARACTERIZED protein L16|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 PDWTCHLT 9
PD+ C LT
Sbjct: 88 PDYICDLT 95


>sp|NSP_ICMV|NUCLEAR shuttle protein|Indian cassava mosaic virus (ICMV)

Query: 1 GPDWTCH 7
GPD+T H
Sbjct: 65 GPDFTIH 71


>sp|YL876_MIMIV|UNCHARACTERIZED protein L876|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 WTCHL 8
W CHL
Sbjct: 129 WNCHL 133


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 GPDWTCH 7
GPD TC+
Sbjct: 4139 GPDQTCN 4145


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 GPDWTCH 7
GPD TC+
Sbjct: 4139 GPDQTCN 4145


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 GPDWTCH 7
GPD TC+
Sbjct: 4139 GPDQTCN 4145


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 GPDWTCH 7
GPD TC+
Sbjct: 4139 GPDQTCN 4145


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 GPDWTCH 7
GPD TC+
Sbjct: 4139 GPDQTCN 4145


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 GPDWTCH 7
GPD TC+
Sbjct: 4139 GPDQTCN 4145


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 GPDWTCH 7
GPD TC+
Sbjct: 4139 GPDQTCN 4145


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 GPDWTCH 7
GPD TC+
Sbjct: 4139 GPDQTCN 4145


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 GPDWTCH 7
GPD TC+
Sbjct: 4139 GPDQTCN 4145


>sp|VF345_ASFM2|PROTEIN D345L|African swine fever virus (isolate

Query: 2 PDWTCHLT 9
PD CHLT
Sbjct: 107 PDGFCHLT 114


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 GPDWTCH 7
GPD TC+
Sbjct: 4139 GPDQTCN 4145


>sp|NCAP_SFTSV|NUCLEOPROTEIN phlebovirus (isolate SFTSV/Human/China/HB29/2010) (Severe

Query: 2 PDWTC 6
P WTC
Sbjct: 112 PTWTC 116


>sp|NCAP_SFTS|NUCLEOPROTEIN bandavirus (Severe fever with

Query: 2 PDWTC 6
P WTC
Sbjct: 112 PTWTC 116


>sp|ACB1_BPSP8|ANTI-CBASS protein Acb1|Shigella phage SP18

Query: 2 PDWTCHLT 9
PD+T H+T
Sbjct: 107 PDYTPHIT 114


>sp|L_IHNVW|RNA-DIRECTED RNA polymerase L|Infectious hematopoietic necrosis virus (strain

Query: 3 DWTC 6
DWTC
Sbjct: 1582 DWTC 1585


>sp|L_IHNVO|RNA-DIRECTED RNA polymerase L|Infectious hematopoietic necrosis virus (strain

Query: 3 DWTC 6
DWTC
Sbjct: 1582 DWTC 1585


>sp|RDRP_PEMVW|PROTEIN P1-P2|Pea enation mosaic virus-1 (strain

Query: 2 PDWTC 6
P+WTC
Sbjct: 106 PNWTC 110


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2 PDWTCHLTK 10
P W HLT+
Sbjct: 2038 PYWLSHLTQ 2046


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2 PDWTCHLTK 10
P W HLT+
Sbjct: 2038 PYWLSHLTQ 2046


>sp|RIR2_BPT4|RIBONUCLEOSIDE-DIPHOSPHATE reductase subunit beta|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 DWTCHLTK 10
DW HL K
Sbjct: 294 DWAVHLFK 301


>sp|P1_PEMVW|PROTEIN P1|Pea enation mosaic virus-1 (strain

Query: 2 PDWTC 6
P+WTC
Sbjct: 106 PNWTC 110


>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 3 DWTC 6
DWTC
Sbjct: 1582 DWTC 1585


>sp|CAPSD_FCVF4|CAPSID protein VP1|Feline calicivirus (strain Japanese F4)

Query: 1 GPDWTCHLTK 10
GPD+ HL K
Sbjct: 317 GPDFKFHLLK 326


>sp|RDRP_FDVS|RNA-DIRECTED RNA polymerase VP1|Fiji disease virus (isolate Sugarcane)

Query: 4 WTCHLT 9
W CH T
Sbjct: 981 WNCHRT 986


>sp|POL_OMVVS|POL polyprotein|Ovine maedi visna related virus

Query: 2 PDWTCH 7
P WTC+
Sbjct: 175 PHWTCN 180


>sp|CAPSD_FCVF9|CAPSID protein VP1|Feline calicivirus (strain F9) (FCV)

Query: 1 GPDWTCHLTK 10
GPD+ HL K
Sbjct: 317 GPDFKFHLLK 326


>sp|VSR_MSTV|SUPPRESSOR of RNA silencing p3|Maize stripe virus (MStV)

Query: 4 WTCHLTK 10
WTC ++K
Sbjct: 121 WTCRMSK 127


>sp|POL_VILV1|GAG-POL polyprotein|Maedi visna virus (strain 1514

Query: 2 PDWTCH 7
P WTC+
Sbjct: 595 PHWTCN 600


>sp|CAPSD_FCVC6|CAPSID protein VP1|Feline calicivirus (strain CFI/68 FIV)

Query: 1 GPDWTCHLTK 10
GPD+ HL K
Sbjct: 317 GPDFKFHLLK 326


>sp|POL_VILVK|GAG-POL polyprotein|Maedi visna virus (strain KV1772)

Query: 2 PDWTCH 7
P WTC+
Sbjct: 595 PHWTCN 600


>sp|POL_VILV2|GAG-POL polyprotein|Maedi visna virus (strain 1514

Query: 2 PDWTCH 7
P WTC+
Sbjct: 595 PHWTCN 600


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3 DWTCHLTK 10
DW HL K
Sbjct: 4924 DWVKHLNK 4931


>sp|POL_VILV|GAG-POL polyprotein|Maedi visna virus (strain 1514)

Query: 2 PDWTCH 7
P WTC+
Sbjct: 595 PHWTCN 600


>sp|POL_CAEVC|POL polyprotein|Caprine arthritis encephalitis virus (strain

Query: 2 PDWTCH 7
P WTC+
Sbjct: 199 PHWTCN 204


>sp|POLG_AEVVR|GENOME polyprotein|Avian encephalomyelitis virus (strain Van

Query: 4 WTCHLTK 10
WTC + K
Sbjct: 962 WTCRIVK 968


>sp|POLG_AEVCA|GENOME polyprotein|Avian encephalomyelitis virus (strain Calnek

Query: 4 WTCHLTK 10
WTC + K
Sbjct: 962 WTCRIVK 968


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3 DWTCHLTK 10
DW HL K
Sbjct: 4949 DWVKHLNK 4956


>sp|VSR_RSVT|SUPPRESSOR of RNA silencing p3|Rice stripe virus (isolate T)

Query: 4 WTCHLTK 10
WTC ++K
Sbjct: 121 WTCRMSK 127


>sp|VSR_RSVM|SUPPRESSOR of RNA silencing p3|Rice stripe virus (isolate M)

Query: 4 WTCHLTK 10
WTC ++K
Sbjct: 121 WTCRMSK 127


>sp|ORF3_TTVT1|UNCHARACTERIZED ORF2 protein|Torque teno canis virus (isolate

Query: 3 DWTCHLTK 10
DWT HL K
Sbjct: 52 DWTRHLKK 59


>sp|ACB1_BPKVM|ANTI-CBASS protein Acb1|Vibrio phage KVP40 (isolate Vibrio

Query: 2 PDWTCHLT 9
PD+T H+T
Sbjct: 109 PDYTPHVT 116


>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus

Query: 3 DWTCHLTK 10
+W CH K
Sbjct: 659 EWFCHKNK 666




52|SequenceR|265|256|LATDTGPDWT

>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain

Query: 1 LATDTGPDWT 10
LATD GP W+
Sbjct: 865 LATDPGPSWS 874


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 1 LATDTGPDWT 10
LATD GP W+
Sbjct: 865 LATDPGPSWS 874


>sp|POL_SIVGB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate GB1)

Query: 1 LATDTGPDWT 10
L TD GP++T
Sbjct: 1269 LHTDNGPNFT 1278


>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)

Query: 1 LATDTGPDW 9
L++DT P W
Sbjct: 126 LSSDTAPRW 134


>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)

Query: 1 LATDTGPDW 9
L++DT P W
Sbjct: 126 LSSDTAPRW 134


>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 LATDTGPDW 9
L++DT P W
Sbjct: 126 LSSDTAPRW 134


>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)

Query: 1 LATDTGPDW 9
L++DT P W
Sbjct: 126 LSSDTAPRW 134


>sp|RDRP_SCVLA|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-A

Query: 2 ATDTGPDW 9
+TD+ PDW
Sbjct: 179 STDSYPDW 186


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 LATDTGPDWT 10
L TD GP++T
Sbjct: 1283 LHTDNGPNFT 1292


>sp|POL_SIVVT|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 LATDTGPDWT 10
L TD GP++T
Sbjct: 1289 LHTDNGPNFT 1298


>sp|POL_SIVVG|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 LATDTGPDWT 10
L TD GP++T
Sbjct: 1287 LHTDNGPNFT 1296


>sp|POL_SIVG1|GAG-POL polyprotein|Simian immunodeficiency virus agm.grivet (isolate

Query: 1 LATDTGPDWT 10
L TD GP++T
Sbjct: 1282 LHTDNGPNFT 1291


>sp|EXLYS_BPT7|PEPTIDOGLYCAN transglycosylase gp16|Escherichia phage T7 (Bacteriophage T7)

Query: 2 ATDTGP 7
ATDTGP
Sbjct: 958 ATDTGP 963


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 LATDTGPDWT 10
L TD GP++T
Sbjct: 1282 LHTDNGPNFT 1291


>sp|POL_SIVV1|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 LATDTGPDWT 10
L TD GP++T
Sbjct: 1286 LHTDNGPNFT 1295


>sp|DEPOL_BPK05|PROBABLE tail spike protein|Klebsiella phage 0507-KN2-1 (Taipeivirus 0507KN21)

Query: 3 TDTGPDWT 10
TD G DWT
Sbjct: 1164 TDAGLDWT 1171


>sp|DPOL_IIV3|DNA polymerase 120R|Invertebrate iridescent virus 3 (IIV-3)

Query: 4 DTGPDW 9
+ GPDW
Sbjct: 1077 ELGPDW 1082


>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49

Query: 3 TDTGPD 8
TDTGPD
Sbjct: 121 TDTGPD 126


>sp|L_IPPYV|RNA-DIRECTED RNA polymerase L|Ippy mammarenavirus (isolate Rat/Central African

Query: 3 TDTGPD 8
T+TGPD
Sbjct: 1094 TETGPD 1099


>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)

Query: 1 LATDTGPDW 9
L++DT P W
Sbjct: 126 LSSDTAPRW 134


>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 LATDTGPDW 9
L++DT P W
Sbjct: 126 LSSDTAPRW 134


>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)

Query: 1 LATDTGPDW 9
L++DT P W
Sbjct: 126 LSSDTAPRW 134


>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)

Query: 1 LATDTGPDW 9
L++DT P W
Sbjct: 126 LSSDTAPRW 134


>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)

Query: 1 LATDTGPDW 9
L++DT P W
Sbjct: 126 LSSDTAPRW 134


>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)

Query: 1 LATDTGPDW 9
L++DT P W
Sbjct: 126 LSSDTAPRW 134


>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)

Query: 1 LATDTGPDW 9
L++DT P W
Sbjct: 126 LSSDTAPRW 134


>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 1 LATDTGPDWT 10
L TD GP +T
Sbjct: 1565 LKTDNGPGYT 1574


>sp|NS1_PAVPN|INITIATOR protein NS1|Porcine parvovirus (strain NADL-2) (PPV)

Query: 3 TDTGPDWT 10
TDT P W+
Sbjct: 632 TDTSPTWS 639


>sp|POL_IPMAI|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 1 LATDTGPDWT 10
L TD GP +T
Sbjct: 626 LKTDNGPAYT 635


>sp|53DR_BPKVM|PUTATIVE 5'(3')-deoxyribonucleotidase|Vibrio phage KVP40 (isolate Vibrio

Query: 1 LATDTGPDW 9
TD PDW
Sbjct: 150 FGTDEFPDW 158


>sp|GAG_SCVLA|MAJOR capsid protein|Saccharomyces cerevisiae virus L-A (ScV-L-A)

Query: 2 ATDTGPDW 9
+TD+ PDW
Sbjct: 179 STDSYPDW 186


>sp|POL_IPMA|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 1 LATDTGPDWT 10
L TD GP +T
Sbjct: 708 LKTDNGPAYT 717


>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5 TGPDWT 10
T PDWT
Sbjct: 94 TDPDWT 99


>sp|TERL_BPSF5|PUTATIVE terminase large subunit|Shigella phage SfV (Shigella flexneri

Query: 4 DTGPDWT 10
D G DWT
Sbjct: 279 DEGDDWT 285




53|SequenceR|270|261|QKSWGLATDT

>sp|YR656_MIMIV|UNCHARACTERIZED protein R656|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 SWGLATD 9
SW LATD
Sbjct: 103 SWSLATD 109


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 1 QKSWGLAT 8
QK+W +AT
Sbjct: 803 QKTWTIAT 810


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1 QKSWGLAT 8
QK+W +AT
Sbjct: 803 QKTWTIAT 810


>sp|YL397_MIMIV|UNCHARACTERIZED protein L397|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 SWGLATD 9
SWG+A D
Sbjct: 73 SWGVAID 79


>sp|POL1_RCMV|RNA1 polyprotein|Red clover mottle virus (RCMV)

Query: 3 SWGLAT 8
+WGLAT
Sbjct: 226 TWGLAT 231


>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)

Query: 1 QKSWGLAT 8
+ +WGLAT
Sbjct: 478 RNNWGLAT 485


>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 1 QKSWGL 6
Q+SWGL
Sbjct: 1188 QRSWGL 1193




54|SequenceR|275|266|YSQSPQKSWG

>sp|RDRP_SBWMN|REPLICASE large subunit|Soil-borne wheat mosaic virus (strain

Query: 2 SQSPQKSWG 10
S+ P+KSW
Sbjct: 828 SEVPEKSWA 836


>sp|Y041_OSHVF|UNCHARACTERIZED protein ORF41|Ostreid herpesvirus 1 (isolate France)

Query: 3 QSPQKSW 9
QSP K+W
Sbjct: 547 QSPMKTW 553


>sp|Y223_AFV1Y|UNCHARACTERIZED protein ORF223|Acidianus filamentous virus 1 (isolate

Query: 2 SQSPQKSW 9
SQ P++SW
Sbjct: 38 SQCPRRSW 45


>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus

Query: 4 SPQKSW 9
SPQ+SW
Sbjct: 1817 SPQESW 1822


>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United

Query: 1 YSQSPQKSWG 10
Y+Q P +WG
Sbjct: 42 YAQLPPTTWG 51


>sp|VP4_ROTBS|OUTER capsid protein VP4|Rotavirus C (isolate

Query: 1 YSQSPQKSWG 10
Y+Q P +WG
Sbjct: 42 YAQLPPTTWG 51


>sp|VP4_ROTPC|OUTER capsid protein VP4|Rotavirus C (strain RVC/Pig/United

Query: 1 YSQSPQKSWG 10
Y+Q P WG
Sbjct: 42 YAQLPPTKWG 51


>sp|GI_EHV1D|ENVELOPE glycoprotein I|Equine herpesvirus 1 (strain Kentucky

Query: 2 SQSPQKSWG 10
+Q+P +WG
Sbjct: 218 TQTPSATWG 226


>sp|GI_EHV1B|ENVELOPE glycoprotein I|Equine herpesvirus 1 (strain Ab4p)

Query: 2 SQSPQKSWG 10
+Q+P +WG
Sbjct: 218 TQTPSATWG 226


>sp|GI_EHV1A|ENVELOPE glycoprotein I|Equine herpesvirus 1 (strain AB1)

Query: 2 SQSPQKSWG 10
+Q+P +WG
Sbjct: 218 TQTPSATWG 226


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1 YSQSPQKSW 9
+++ PQ+SW
Sbjct: 1343 FTRLPQRSW 1351


>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12

Query: 5 PQKSWG 10
PQ SWG
Sbjct: 486 PQASWG 491


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1 YSQSPQKSW 9
+SQS KSW
Sbjct: 1354 FSQSYLKSW 1362


>sp|VGA10_ALHV1|UNCHARACTERIZED gene A10 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 YSQSPQKSWG 10
YS SP+K+ G
Sbjct: 62 YSNSPEKAPG 71


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 5 PQKSWG 10
P KSWG
Sbjct: 2296 PAKSWG 2301




55|SequenceR|280|271|SEFLTYSQSP

>sp|POLG_MNV1|GENOME polyprotein|Norovirus (isolate Mouse/NoV/United

Query: 2 EFLTYSQSP 10
+FL Y++SP
Sbjct: 621 DFLVYAESP 629


>sp|REPA_PASVK|REPLICATION-ASSOCIATED protein A|Panicum streak virus (isolate Kenya)

Query: 3 FLTYSQSP 10
FLTYS+ P
Sbjct: 25 FLTYSKCP 32


>sp|VF030_IIV3|UNCHARACTERIZED protein 106R|Invertebrate iridescent virus 3 (IIV-3)

Query: 4 LTYSQSP 10
LTY+QSP
Sbjct: 342 LTYNQSP 348


>sp|REP_SSVN|REPLICATION-ASSOCIATED protein|Sugarcane streak virus (isolate South

Query: 3 FLTYSQSP 10
FLTYS+ P
Sbjct: 24 FLTYSRCP 31


>sp|REPA_SSVN|REPLICATION-ASSOCIATED protein A|Sugarcane streak virus (isolate South

Query: 3 FLTYSQSP 10
FLTYS+ P
Sbjct: 24 FLTYSRCP 31


>sp|REP_MSVRA|REPLICATION-ASSOCIATED protein|Maize streak virus genotype D

Query: 3 FLTYSQSP 10
FLTY Q P
Sbjct: 18 FLTYPQCP 25


>sp|REP_MSVSE|REPLICATION-ASSOCIATED protein|Maize streak virus genotype C

Query: 3 FLTYSQSP 10
FLTY Q P
Sbjct: 18 FLTYPQCP 25


>sp|REPA_MSVSE|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype C

Query: 3 FLTYSQSP 10
FLTY Q P
Sbjct: 18 FLTYPQCP 25


>sp|REPA_MSVRA|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype D

Query: 3 FLTYSQSP 10
FLTY Q P
Sbjct: 18 FLTYPQCP 25


>sp|Y286A_AFV2P|UNCHARACTERIZED protein ORF286a|Acidianus filamentous virus 2 (isolate

Query: 1 SEFLTYSQSP 10
S +L Y QSP
Sbjct: 257 STYLAYMQSP 266




56|SequenceR|285|276|KEGSFSEFLT

>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 2 EGSFSEFL 9
EGSF EFL
Sbjct: 1046 EGSFEEFL 1053


>sp|TRX1_SHV21|TRIPLEX capsid protein 1|Saimiriine herpesvirus 2 (strain 11)

Query: 1 KEGSFSEFLT 10
+EG F +FLT
Sbjct: 152 EEGKFHQFLT 161


>sp|YL265_MIMIV|UNCHARACTERIZED protein L265|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KEGSFSEF 8
K+G FSEF
Sbjct: 151 KKGDFSEF 158


>sp|RDRP_ASPVP|RNA replication polyprotein|Apple stem pitting virus (isolate

Query: 1 KEGSFSEF 8
KEGSFS F
Sbjct: 1024 KEGSFSGF 1031


>sp|RDRP_MBVLF|RNA-DIRECTED RNA polymerase|Mushroom bacilliform virus (isolate Australia/AUS

Query: 1 KEGSFSEF 8
+EG FS+F
Sbjct: 22 REGGFSDF 29


>sp|CAPSD_AHV2H|CAPSID protein|Atkinsonella hypoxylon virus (isolate 2H)

Query: 1 KEGSFSEF 8
K+G+FS+F
Sbjct: 395 KQGNFSQF 402




57|SequenceR|290|281|HTCLKKEGSF

>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 CLKKEGS 9
C+K+EGS
Sbjct: 276 CMKREGS 282


>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 CLKKEGS 9
C+K+EGS
Sbjct: 276 CMKREGS 282


>sp|PHOSP_ARAV|PHOSPHOPROTEIN virus (ARAV)

Query: 2 TCLKKEG 8
TC+K+EG
Sbjct: 70 TCMKEEG 76


>sp|POL1_GFLV|RNA1 polyprotein|Grapevine fanleaf virus (GFLV)

Query: 1 HTCLKK 6
HTCL+K
Sbjct: 2279 HTCLRK 2284


>sp|TAP25_BPML5|TAIL assembly protein Gp25|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 3 CLKKEGSF 10
CL K+G+F
Sbjct: 174 CLPKDGAF 181


>sp|VF019_IIV3|PUTATIVE MSV199 domain-containing protein 093L|Invertebrate iridescent

Query: 2 TCLKKEG 8
TCLKK G
Sbjct: 2 TCLKKTG 8




58|SequenceR|295|286|NCWNKHTCLK

>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 1 NCWNKHTCLK 10
NCW TCL+
Sbjct: 1728 NCWVNVTCLQ 1737


>sp|NCAP_TAMVU|NUCLEOPROTEIN mammarenavirus (isolate Rat/United States/W

Query: 4 NKHTCLK 10
NKH+CLK
Sbjct: 221 NKHSCLK 227


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 1 NCWNKHTCLK 10
NCW TCL+
Sbjct: 1728 NCWVNVTCLQ 1737


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1 NCWNKHTCL 9
NCW TC+
Sbjct: 1677 NCWVNATCI 1685


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1 NCWNKHTCL 9
NCW TC+
Sbjct: 1677 NCWVNATCI 1685


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 NCWNKHTCLK 10
NCW CL+
Sbjct: 1736 NCWINAVCLQ 1745


>sp|R1A_WBV24|REPLICASE polyprotein 1a|White bream virus (isolate Blicca

Query: 1 NCWNKHTCLK 10
+C HTC+K
Sbjct: 2800 HCCGPHTCIK 2809


>sp|POLN_AHEV|NON-STRUCTURAL polyprotein pORF1|Avian hepatitis E virus (isolate

Query: 2 CWNKHT 7
CW KH+
Sbjct: 1353 CWKKHS 1358


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 1 NCWNKHTCLK 10
+C HTC+K
Sbjct: 2800 HCCGPHTCIK 2809


>sp|YR826_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R826|Acanthamoeba

Query: 2 CWNKHTC 8
C+NK TC
Sbjct: 706 CYNKGTC 712


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 NCWNKHTCLK 10
NCW CL+
Sbjct: 1736 NCWINAVCLQ 1745


>sp|POXIN_NPVOP|POXIN pseudotsugata multicapsid polyhedrosis virus

Query: 1 NCWNKHTCLK 10
+C+N H C K
Sbjct: 78 HCFNYHVCNK 87


>sp|RDRP_AQRVC|RNA-DIRECTED RNA polymerase VP2|Aquareovirus C (isolate Golden

Query: 3 WNKHTCL 9
W K+TCL
Sbjct: 1100 WFKYTCL 1106


>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 1 NCWNKHTCL 9
NCW CL
Sbjct: 1587 NCWINAICL 1595


>sp|L_GOGV|RNA-DIRECTED RNA polymerase L|Alethinophid 1 reptarenavirus (isolate

Query: 1 NCWNKHTCLK 10
NC NKH K
Sbjct: 1325 NCLNKHISPK 1334


>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NCWNKHTCL 9
N W KH C+
Sbjct: 66 NVWAKHACV 74


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 NCWNKHTCL 9
NCW CL
Sbjct: 1598 NCWVNAICL 1606


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 1 NCWNKHTCL 9
NCW CL
Sbjct: 1587 NCWINAICL 1595


>sp|Y146_HVAVE|PUTATIVE structural protein ORF146|Heliothis virescens ascovirus 3e

Query: 2 CWNKHTCL 9
C NK TC+
Sbjct: 365 CTNKATCI 372


>sp|POXIN_NPVBM|POXIN mori nuclear polyhedrosis virus

Query: 2 CWNKHTCLK 10
C+N H C K
Sbjct: 84 CFNFHVCNK 92


>sp|POXIN_NPVAC|POXIN californica nuclear polyhedrosis virus

Query: 2 CWNKHTCLK 10
C+N H C K
Sbjct: 84 CFNFHVCNK 92


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1 NCWNKHTCL 9
NCW C+
Sbjct: 1700 NCWVNAVCI 1708


Query: 2 CWNKHTC 8
CW H C
Sbjct: 4054 CWLNHGC 4060


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 NCWNKHTCL 9
NCW C+
Sbjct: 1700 NCWVNAVCI 1708


Query: 2 CWNKHTC 8
CW H C
Sbjct: 4054 CWLNHGC 4060




59|SequenceR|300|291|QTIQWNCWNK

>sp|RDRP_PRV|RNA-DIRECTED RNA polymerase|Pieris rapae virus

Query: 4 QWNCW 8
+WNCW
Sbjct: 93 RWNCW 97


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 4 QWNCWN 9
QWNC+N
Sbjct: 2525 QWNCFN 2530


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 4 QWNCWN 9
QWNC+N
Sbjct: 2495 QWNCFN 2500


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 4 QWNCWN 9
QWNC+N
Sbjct: 2475 QWNCFN 2480


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 4 QWNCWN 9
QWNC+N
Sbjct: 2495 QWNCFN 2500


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 4 QWNCWN 9
QWNC+N
Sbjct: 2525 QWNCFN 2530


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 4 QWNCWN 9
QWNC+N
Sbjct: 2475 QWNCFN 2480


>sp|U24_HHV6Z|U24 protein|Human herpesvirus 6B (strain Z29)

Query: 5 WNCWNK 10
WN WNK
Sbjct: 48 WNLWNK 53


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 4 QWNCWN 9
QWNC N
Sbjct: 2470 QWNCLN 2475


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 4 QWNCWN 9
QWNC N
Sbjct: 2470 QWNCLN 2475


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 4 QWNCWN 9
QWNC N
Sbjct: 2527 QWNCLN 2532


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 4 QWNCWN 9
QWNC N
Sbjct: 2524 QWNCLN 2529


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 4 QWNCWN 9
QWNC N
Sbjct: 2527 QWNCLN 2532


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 4 QWNCWN 9
QWNC N
Sbjct: 2524 QWNCLN 2529


>sp|BPPB3_BPT5|BASEPLATE hub protein pb3|Escherichia phage T5 (Enterobacteria phage

Query: 3 IQWNCWNK 10
I WNC N+
Sbjct: 154 ITWNCSNQ 161


>sp|P9_WTVNJ|MINOR outer capsid protein P9|Wound tumor virus (strain NJ)

Query: 6 NCWNK 10
NCWN+
Sbjct: 57 NCWNE 61


>sp|P9_WTV|MINOR outer capsid protein P9|Wound tumor virus (WTV)

Query: 6 NCWNK 10
NCWN+
Sbjct: 57 NCWNE 61


>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B

Query: 1 QTIQWNCWNK 10
QT NCW K
Sbjct: 475 QTAVENCWEK 484


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 QTIQWNCWN 9
+T WNC N
Sbjct: 2421 KTHNWNCLN 2429


>sp|FIB37_BPT4|LONG-TAIL fiber protein gp37|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 QTIQWN 6
+TIQWN
Sbjct: 464 RTIQWN 469


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 QTIQWNCWN 9
+T WNC N
Sbjct: 2423 KTHNWNCLN 2431


>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A

Query: 1 QTIQWNCWNK 10
QT NCW K
Sbjct: 475 QTAVENCWEK 484


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 QTIQWNCWN 9
+T WNC N
Sbjct: 2423 KTHNWNCLN 2431


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 QTIQWNCWN 9
+T WNC N
Sbjct: 2421 KTHNWNCLN 2429


>sp|CHIT_NPVOP|PROBABLE endochitinase|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 3 IQWNCWN 9
+ WN WN
Sbjct: 56 VSWNVWN 62


>sp|CARG1_BPCA1|CARGO protein 1|Bacteroides phage crAss001 (Bacteroides phage

Query: 4 QWNCWNK 10
+W WNK
Sbjct: 94 EWGSWNK 100


>sp|RDRP_BYDVR|PUTATIVE RNA-directed RNA polymerase|Barley yellow dwarf virus (isolate

Query: 6 NCWN 9
NCWN
Sbjct: 160 NCWN 163


>sp|RDRP_BYDVP|PUTATIVE RNA-directed RNA polymerase|Barley yellow dwarf virus (isolate

Query: 6 NCWN 9
NCWN
Sbjct: 160 NCWN 163


>sp|RDRP_BYDVM|PUTATIVE RNA-directed RNA polymerase|Barley yellow dwarf virus (isolate

Query: 6 NCWN 9
NCWN
Sbjct: 160 NCWN 163


>sp|CHIT_NPVAC|CHITINASE californica nuclear polyhedrosis virus

Query: 3 IQWNCWN 9
+ WN WN
Sbjct: 57 VSWNVWN 63


>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])

Query: 1 QTIQWNCWNK 10
++I W W K
Sbjct: 346 ESIDWKTWRK 355


>sp|U24_HHV6U|U24 protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 WNCWN 9
WN WN
Sbjct: 47 WNLWN 51


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 4 QWNC 7
QWNC
Sbjct: 2437 QWNC 2440


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 4 QWNC 7
QWNC
Sbjct: 2437 QWNC 2440


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 4 QWNC 7
QWNC
Sbjct: 2437 QWNC 2440


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 4 QWNC 7
QWNC
Sbjct: 2437 QWNC 2440


>sp|YL041_MIMIV|UNCHARACTERIZED protein L41|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 IQWNCWN 9
IQW+ WN
Sbjct: 467 IQWHYWN 473


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 4 QWNC 7
QWNC
Sbjct: 2437 QWNC 2440


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 4 QWNC 7
QWNC
Sbjct: 2437 QWNC 2440


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 4 QWNC 7
QWNC
Sbjct: 2437 QWNC 2440


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 4 QWNC 7
QWNC
Sbjct: 2437 QWNC 2440


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 4 QWNC 7
QWNC
Sbjct: 2437 QWNC 2440


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 4 QWNC 7
QWNC
Sbjct: 2437 QWNC 2440


>sp|NEF_SIVVT|PROTEIN Nef|Simian immunodeficiency virus agm.vervet (isolate

Query: 5 WNCWNK 10
WN W+K
Sbjct: 143 WNAWSK 148


>sp|YR871_MIMIV|UNCHARACTERIZED protein R871|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 IQWNCWN 9
+ WN WN
Sbjct: 548 LTWNSWN 554


>sp|KP6T_UMV6|KP6 killer toxin|Ustilago maydis P6 virus (UmV6)

Query: 2 TIQWNCW 8
+ +W CW
Sbjct: 38 SCKWECW 44


>sp|YL876_MIMIV|UNCHARACTERIZED protein L876|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 IQWNC 7
I+WNC
Sbjct: 127 IRWNC 131


>sp|U3_TIBVC|PROTEIN U3|Tibrogargan virus (strain CS132) (TIBV)

Query: 1 QTIQWNCWNK 10
+ I+WN W K
Sbjct: 74 KIIKWNIWKK 83




60|SequenceR|305|296|TEQSDQTIQW

>sp|CAPSD_RRSVT|INNER capsid protein VP3|Rice ragged stunt virus (isolate

Query: 1 TEQSDQTIQW 10
TEQ D TIQ+
Sbjct: 1062 TEQVDPTIQF 1071


>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)

Query: 4 SDQTIQW 10
++QT+QW
Sbjct: 432 AEQTVQW 438


>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)

Query: 4 SDQTIQW 10
++QT+QW
Sbjct: 429 AEQTVQW 435


>sp|PRO_ADE09|PROTEASE adenovirus D serotype 9

Query: 2 EQSDQTIQ 9
EQS QT+Q
Sbjct: 109 EQSTQTVQ 116


>sp|PRO_ADE17|PROTEASE adenovirus D serotype 17

Query: 2 EQSDQTIQ 9
EQS QT+Q
Sbjct: 109 EQSTQTVQ 116


>sp|VE1_CRPVK|REPLICATION protein E1|Cottontail rabbit papillomavirus (strain Kansas)

Query: 1 TEQSDQTIQW 10
T QSD+T+ W
Sbjct: 177 TFQSDKTMSW 186


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 2 EQSDQTIQ 9
E+SDQTI+
Sbjct: 312 EKSDQTIK 319


>sp|VE1_CRPVW|REPLICATION protein E1|Cottontail rabbit papillomavirus (strain Washington

Query: 1 TEQSDQTIQW 10
T QSD+T+ W
Sbjct: 144 TFQSDKTMSW 153




61|SequenceR|310|301|LTFNYTEQSD

>sp|YR470_MIMIV|PUTATIVE DNA directed RNA polymerase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 YTEQSD 10
YTEQSD
Sbjct: 127 YTEQSD 132


>sp|VF345_ASFB7|PROTEIN D345L|African swine fever virus (strain

Query: 1 LTFNYTEQS 9
LT YT+QS
Sbjct: 113 LTLGYTQQS 121


>sp|VF345_ASFP4|PROTEIN D345L|African swine fever virus (isolate

Query: 1 LTFNYTEQS 9
LT YT+QS
Sbjct: 113 LTLGYTQQS 121


>sp|VF345_ASFWA|PROTEIN D345L|African swine fever virus (isolate

Query: 1 LTFNYTEQS 9
LT YT+QS
Sbjct: 113 LTLGYTQQS 121


>sp|VF345_ASFM2|PROTEIN D345L|African swine fever virus (isolate

Query: 1 LTFNYTEQS 9
LT YT+QS
Sbjct: 113 LTLGYTQQS 121


>sp|CAPSD_ADVG|CAPSID protein VP1|Aleutian mink disease parvovirus (strain

Query: 2 TFNYTEQSD 10
TFNY E D
Sbjct: 611 TFNYDENPD 619




62|SequenceR|315|306|YNEAILTFNY

>sp|VG48_EHV2|TEGUMENT protein G48|Equine herpesvirus 2 (strain 86/87)

Query: 1 YNEAILTFN 9
YN+A+L N
Sbjct: 169 YNQAVLNLN 177


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 1 YNEAILTFN 9
YN+AIL+ N
Sbjct: 1651 YNDAILSVN 1659


>sp|YR422_MIMIV|UNCHARACTERIZED protein R422|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YNEAILTFNY 10
YN+ ILT++Y
Sbjct: 65 YNDQILTYSY 74


>sp|POLG_BSTV1|GENOME polyprotein|Brome streak virus (strain 11-Cal)

Query: 1 YNEAILTFNY 10
YNE I +F Y
Sbjct: 965 YNEFINSFGY 974


>sp|VP24_NPVOP|CAPSID protein p24|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 2 NEAILTFN 9
NEAI+T N
Sbjct: 133 NEAIVTLN 140




63|SequenceR|320|311|SRKRLYNEAI

>sp|TSP_BPT4|TAIL sheath protein|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 RKRLYNEAI 10
R RLY EAI
Sbjct: 514 RDRLYQEAI 522


>sp|RDRP_CGMVS|REPLICASE large subunit|Cucumber green mottle mosaic virus

Query: 1 SRKRLYNEAI 10
+ KR+Y+EA+
Sbjct: 27 ASKRVYDEAV 36


>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 SRKRLYNEA 9
+R+R+YNE+
Sbjct: 38 TRQRVYNES 46


>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 RKRLYNE 8
+K+LYNE
Sbjct: 168 KKKLYNE 174


>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 RKRLYNE 8
+K+LYNE
Sbjct: 168 KKKLYNE 174




64|SequenceR|325|316|FLINVSRKRL

>sp|Y112_ABVP|PUTATIVE transmembrane protein ORF112|Acidianus bottle-shaped virus (isolate

Query: 1 FLINVSRKRL 10
FL+ VSR RL
Sbjct: 96 FLVGVSRARL 105


>sp|POL_FIVPE|POL polyprotein|Feline immunodeficiency virus (isolate Petaluma)

Query: 2 LINVSRKRL 10
+INVSRK +
Sbjct: 792 MINVSRKSI 800




65|SequenceR|330|321|RHTLNFLINV

>sp|PORTL_BPPHE|PROBABLE portal protein|Enterococcus phage phiEF24C (Enterococcus

Query: 4 LNFLINV 10
LN+LINV
Sbjct: 349 LNYLINV 355


>sp|CLAMP_BPT4|SLIDING clamp|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 HTLNFLINV 10
+T NF+IN+
Sbjct: 176 NTFNFIINM 184


>sp|R1A_WBV24|REPLICASE polyprotein 1a|White bream virus (isolate Blicca

Query: 4 LNFLINV 10
+NFLINV
Sbjct: 2431 INFLINV 2437


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 4 LNFLINV 10
+NFLINV
Sbjct: 2431 INFLINV 2437


>sp|Y061_OSHVF|UNCHARACTERIZED protein ORF61|Ostreid herpesvirus 1 (isolate France)

Query: 1 RHTLNFLINV 10
RHT++ L+N+
Sbjct: 540 RHTMDGLVNM 549




66|SequenceR|335|326|NMLYVRHTLN

>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54

Query: 3 LYVRHTLN 10
++VRH LN
Sbjct: 251 MFVRHMLN 258


>sp|NCAP_ALLVP|NUCLEOPROTEIN mammarenavirus (isolate Rat/Peru/CLHP-2472/1997) (ALLV)

Query: 1 NMLYVRHT 8
NML V+HT
Sbjct: 494 NMLCVKHT 501


>sp|RDRP_SHVX|RNA replication protein|Shallot virus X (ShVX)

Query: 1 NMLYVRHTLN 10
N +RHTLN
Sbjct: 1265 NAKQLRHTLN 1274


>sp|PK1_NPVHZ|SERINE/THREONINE-PROTEIN kinase 1|Heliothis zea nuclear polyhedrosis virus

Query: 1 NMLYVRH 7
N+LYVRH
Sbjct: 139 NVLYVRH 145




67|SequenceR|340|331|NVSFPNMLYV

>sp|L_SHRV|RNA-DIRECTED RNA polymerase L|Snakehead rhabdovirus (SHRV)

Query: 1 NVSFPNMLYV 10
N+ PN++Y+
Sbjct: 1519 NIKVPNLVYI 1528


>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 NVSFPNML 8
N +FPN+L
Sbjct: 198 NAAFPNLL 205


>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)

Query: 1 NVSFPNML 8
N +FPN+L
Sbjct: 198 NAAFPNLL 205


>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant

Query: 1 NVSFPNML 8
N +FPN+L
Sbjct: 198 NAAFPNLL 205


>sp|POL_CAMVS|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain Strasbourg)

Query: 1 NVSFPNMLYV 10
NV+ PN +Y+
Sbjct: 17 NVTNPNSIYI 26


>sp|POL_CAMVE|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain BBC)

Query: 1 NVSFPNMLYV 10
NV+ PN +Y+
Sbjct: 17 NVTNPNSIYI 26


>sp|POL_CAMVC|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain CM-1841)

Query: 1 NVSFPNMLYV 10
NV+ PN +Y+
Sbjct: 17 NVTNPNSIYI 26


>sp|POL_FMVD|ENZYMATIC polyprotein|Figwort mosaic virus (strain DxS)

Query: 1 NVSFPNMLYV 10
NV+ PN +Y+
Sbjct: 26 NVTNPNSIYI 35


>sp|POL_CAMVN|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain NY8153)

Query: 1 NVSFPNMLYV 10
NV+ PN +Y+
Sbjct: 18 NVTNPNSIYI 27


>sp|CAPSD_APRVF|INNER capsid protein VP3|Aedes pseudoscutellaris reovirus (isolate France)

Query: 2 VSFPNMLY 9
+S PN+LY
Sbjct: 1045 ISMPNILY 1052


>sp|POL_CAMVD|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain D/H)

Query: 1 NVSFPNMLYV 10
N++ PN +Y+
Sbjct: 19 NITNPNSIYI 28




68|SequenceR|345|336|NVNEFNVSFP

>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 NVNEFNVS 8
NVN FNV+
Sbjct: 5722 NVNRFNVA 5729


>sp|RDRP_SHMV|REPLICASE large subunit|Sunn-hemp mosaic virus (SHMV) (TMV

Query: 1 NVNEFNVSFP 10
+V +FNV FP
Sbjct: 367 DVAQFNVYFP 376


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 NVNEFNVS 8
NVN FNV+
Sbjct: 5864 NVNRFNVA 5871


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 NVNEFNVS 8
NVN FNV+
Sbjct: 5858 NVNRFNVA 5865


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 NVNEFNVS 8
NVN FNV+
Sbjct: 5856 NVNRFNVA 5863


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 NVNEFNVS 8
NVN FNV+
Sbjct: 5852 NVNRFNVA 5859


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 NVNEFNVS 8
NVN FNV+
Sbjct: 5938 NVNRFNVA 5945


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 1 NVNEFNVS 8
NVN FNV+
Sbjct: 5886 NVNRFNVA 5893


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 NVNEFNVS 8
NVN FNV+
Sbjct: 5853 NVNRFNVA 5860


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 NVNEFNVS 8
NVN FNV+
Sbjct: 5944 NVNRFNVA 5951


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 NVNEFNVS 8
NVN FNV+
Sbjct: 5853 NVNRFNVA 5860


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 NVNEFNVS 8
NVN FNV+
Sbjct: 5853 NVNRFNVA 5860


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 NVNEFNVS 8
NVN FNV+
Sbjct: 5853 NVNRFNVA 5860


>sp|RDRP_PMTVS|REPLICASE large subunit|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 1 NVNEFNVSF 9
NVN F++SF
Sbjct: 534 NVNGFSLSF 542


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 NVNEFNVS 8
NVN FNV+
Sbjct: 5853 NVNRFNVA 5860


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 NVNEFNVS 8
NVN FNV+
Sbjct: 5881 NVNRFNVA 5888


>sp|TRX1_HHV7J|TRIPLEX capsid protein 1|Human herpesvirus 7 (strain JI)

Query: 2 VNEFNVSF 9
+N FNVSF
Sbjct: 85 MNAFNVSF 92


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 NVNEFNVS 8
NVN FNV+
Sbjct: 5911 NVNRFNVA 5918


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 NVNEFNVS 8
NVN FNV+
Sbjct: 5891 NVNRFNVA 5898


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 NVNEFNVS 8
NVN FNV+
Sbjct: 5941 NVNRFNVA 5948


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 NVNEFNVS 8
N+N FNV+
Sbjct: 5867 NINRFNVA 5874


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 NVNEFNVS 8
N+N FNV+
Sbjct: 5958 NINRFNVA 5965


>sp|YL279_MIMIV|PUTATIVE ankyrin repeat protein L279|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 NVNEFN 6
NVNEFN
Sbjct: 398 NVNEFN 403


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1 NVNEFNVSFP 10
N+ E N S P
Sbjct: 431 NIGEINASMP 440


>sp|Y081_OSHVF|UNCHARACTERIZED protein ORF81|Ostreid herpesvirus 1 (isolate France)

Query: 2 VNEFNVSFP 10
+NE SFP
Sbjct: 93 INEIETSFP 101




69|SequenceR|350|341|IANTANVNEF

>sp|NRAM_I77AG|NEURAMINIDASE A virus (strain A/Budgerigar/Hokkaido/1/1977

Query: 2 ANTANVNE 9
ANT NVNE
Sbjct: 45 ANTPNVNE 52


>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1

Query: 1 IANTANVNE 9
IANTAN+ +
Sbjct: 178 IANTANLTQ 186




70|SequenceR|355|346|VKWTMIANTA

>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 KWTMIANT 9
KWT IANT
Sbjct: 391 KWTDIANT 398


>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)

Query: 2 KWTMIANT 9
KWT IANT
Sbjct: 391 KWTDIANT 398


>sp|POL1_TOTV|RNA1 polyprotein|Tomato torrado virus (isolate Solanum

Query: 1 VKWTMIAN 8
++WT++AN
Sbjct: 1362 IEWTLLAN 1369


>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)

Query: 2 KWTMIANT 9
KW+ IANT
Sbjct: 391 KWSDIANT 398


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2 KWTMIANTA 10
KW+M+A A
Sbjct: 2191 KWSMVARGA 2199


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 2 KWTMIANTA 10
KW+M+A A
Sbjct: 2191 KWSMVARGA 2199


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1 VKWTMIANTA 10
V W MIA TA
Sbjct: 45 VLWHMIAGTA 54


>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)

Query: 2 KWTMIANTA 10
KW ++ NTA
Sbjct: 586 KWYLVTNTA 594




71|SequenceR|360|351|NRISHVKWTM

>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 NRISHVKWT 9
NRI+ KWT
Sbjct: 5404 NRIASCKWT 5412


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 NRISHVKWT 9
NRI+ KWT
Sbjct: 5404 NRIASCKWT 5412


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 NRISHVKWT 9
NRI+ KWT
Sbjct: 5404 NRIASCKWT 5412


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 NRISHVKWT 9
NRI+ KWT
Sbjct: 5404 NRIASCKWT 5412


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 NRISHVKWT 9
NRI+ KWT
Sbjct: 5404 NRIASCKWT 5412


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 NRISHVKWT 9
N+I+ KWT
Sbjct: 5495 NKIASCKWT 5503


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 NRISHVKWT 9
N+I+ KWT
Sbjct: 5489 NKIASCKWT 5497


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 1 NRISHVKWT 9
N+I+ KWT
Sbjct: 5437 NKIASCKWT 5445


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 NRISHVKWT 9
N+I+ KWT
Sbjct: 5442 NKIASCKWT 5450


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 NRISHVKWT 9
N+I+ KWT
Sbjct: 5462 NKIASCKWT 5470


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 NRISHVKWT 9
N+I+ KWT
Sbjct: 5492 NKIASCKWT 5500


>sp|POL2_BBWVS|RNA2 polyprotein|Broad bean wilt virus 1

Query: 3 ISHVKW 8
I HVKW
Sbjct: 531 IQHVKW 536


>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13

Query: 1 NRISHVKWT 9
NR+ +V WT
Sbjct: 127 NRMDYVSWT 135


>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936

Query: 2 RISHVKWTM 10
+ SH+KW +
Sbjct: 362 KTSHLKWAL 370


>sp|RDRP_SSDRV|RNA replication protein|Sclerotinia sclerotiorum debilitation-associated

Query: 1 NRISHVKWTM 10
N + HV W +
Sbjct: 1003 NALGHVSWKL 1012




72|SequenceR|365|356|LYTFNNRISH

>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 3 TFNNRIS 9
TF+NRIS
Sbjct: 1293 TFHNRIS 1299


>sp|SPIKE_CVRSD|SPIKE glycoprotein|Rat coronavirus (strain 681) (RCV-SDAV)

Query: 2 YTFNNRIS 9
Y FNN IS
Sbjct: 699 YVFNNNIS 706




73|SequenceR|370|361|LEIQCLYTFN

>sp|YR878_MIMIV|PUTATIVE KilA-N domain-containing protein R878|Acanthamoeba polyphaga

Query: 2 EIQCLYTFN 10
+I+C+Y FN
Sbjct: 324 KIKCMYLFN 332


>sp|026R_IIV6|UNCHARACTERIZED protein 026R|Invertebrate iridescent virus 6 (IIV-6)

Query: 5 CLYTFN 10
CLYTFN
Sbjct: 54 CLYTFN 59


>sp|GLYC_BRSVW|MAJOR surface glycoprotein G|Bovine respiratory syncytial virus (strain

Query: 3 IQCLYTFN 10
+ CLY FN
Sbjct: 27 LSCLYKFN 34


>sp|GLYC_BRSVS|MAJOR surface glycoprotein G|Bovine respiratory syncytial virus (strain

Query: 3 IQCLYTFN 10
+ CLY FN
Sbjct: 27 LSCLYKFN 34


>sp|GLYC_BRSVA|MAJOR surface glycoprotein G|Bovine respiratory syncytial virus (strain

Query: 3 IQCLYTFN 10
+ CLY FN
Sbjct: 27 LSCLYKFN 34


>sp|GLYC_BRSV7|MAJOR surface glycoprotein G|Bovine respiratory syncytial virus (strain

Query: 3 IQCLYTFN 10
+ CLY FN
Sbjct: 27 LSCLYKFN 34


>sp|GLYC_BRSV4|MAJOR surface glycoprotein G|Bovine respiratory syncytial virus (strain

Query: 3 IQCLYTFN 10
+ CLY FN
Sbjct: 27 LSCLYKFN 34


>sp|GLYC_BRSV2|MAJOR surface glycoprotein G|Bovine respiratory syncytial virus (strain

Query: 3 IQCLYTFN 10
+ CLY FN
Sbjct: 27 LSCLYKFN 34


>sp|GLYC_BRSV1|MAJOR surface glycoprotein G|Bovine respiratory syncytial virus (strain

Query: 3 IQCLYTFN 10
+ CLY FN
Sbjct: 27 LSCLYKFN 34


>sp|VF137_ASFK5|STRUCTURAL protein A137R|African swine fever virus (isolate

Query: 2 EIQCLYTFN 10
E++C Y FN
Sbjct: 39 EVRCAYKFN 47


>sp|GLYC_BRSVL|MAJOR surface glycoprotein G|Bovine respiratory syncytial virus (strain

Query: 3 IQCLYTFN 10
+ CLY FN
Sbjct: 27 LSCLYKFN 34


>sp|GLYC_BRSVR|MAJOR surface glycoprotein G|Bovine respiratory syncytial virus (strain

Query: 3 IQCLYTFN 10
+ CLY FN
Sbjct: 27 LSCLYKFN 34


>sp|GLYC_BRSV9|MAJOR surface glycoprotein G|Bovine respiratory syncytial virus (strain

Query: 3 IQCLYTFN 10
+ CLY FN
Sbjct: 27 LSCLYKFN 34


>sp|CAPSD_TASV1|CAPSID polyprotein VP90|Turkey astrovirus 1 (TAstV-1)

Query: 1 LEIQCLYTFN 10
+EI+C Y F+
Sbjct: 231 IEIRCTYLFS 240


>sp|GLYC_BRSVC|MAJOR surface glycoprotein G|Bovine respiratory syncytial virus (strain

Query: 3 IQCLYTFN 10
+ CLY FN
Sbjct: 27 LSCLYKFN 34


>sp|U9_HHV6U|PROTEIN U9|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 EIQCLYTF 9
E +CLYTF
Sbjct: 57 ECECLYTF 64


>sp|VU9_HHV6Z|PROTEIN U9|Human herpesvirus 6B (strain Z29)

Query: 2 EIQCLYTF 9
E +CLYTF
Sbjct: 57 ECECLYTF 64


>sp|VU9_HHV6H|PROTEIN U9|Human herpesvirus 6B (HHV-6 variant

Query: 2 EIQCLYTF 9
E +CLYTF
Sbjct: 57 ECECLYTF 64


>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)

Query: 4 QCLYTF 9
QC+YTF
Sbjct: 457 QCIYTF 462


>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin

Query: 4 QCLYTF 9
QC+YTF
Sbjct: 455 QCIYTF 460


>sp|GP_PHV|ENVELOPMENT polyprotein|Prospect Hill virus (PHV)

Query: 4 QCLYTF 9
QC+YTF
Sbjct: 457 QCIYTF 462


>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)

Query: 4 QCLYTF 9
QC+YTF
Sbjct: 455 QCIYTF 460


>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)

Query: 4 QCLYTF 9
QC+YTF
Sbjct: 461 QCIYTF 466


>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)

Query: 4 QCLYTF 9
QC+YTF
Sbjct: 461 QCIYTF 466


>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)

Query: 4 QCLYTF 9
QC+YTF
Sbjct: 454 QCIYTF 459


>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)

Query: 4 QCLYTF 9
QC+YTF
Sbjct: 456 QCIYTF 461


>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)

Query: 4 QCLYTF 9
QC+YTF
Sbjct: 461 QCIYTF 466


>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 4 QCLYTF 9
QC+YTF
Sbjct: 461 QCIYTF 466


>sp|110R_IIV3|UNCHARACTERIZED protein 110R|Invertebrate iridescent virus 3 (IIV-3)

Query: 5 CLYTF 9
CLYTF
Sbjct: 145 CLYTF 149


>sp|Y113_OSHVF|UNCHARACTERIZED protein ORF113|Ostreid herpesvirus 1 (isolate France)

Query: 2 EIQCLYTFN 10
+I CLYT N
Sbjct: 122 KINCLYTPN 130


>sp|YL033_MIMIV|PUTATIVE KilA-N domain-containing protein L33|Acanthamoeba polyphaga

Query: 4 QCLYTFN 10
+CLY FN
Sbjct: 216 KCLYLFN 222


>sp|UL32_ALHV1|PACKAGING protein UL32 homolog|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 IQCLYTFN 10
+ C YTFN
Sbjct: 458 LSCYYTFN 465




74|SequenceR|375|366|KGEGHLEIQC

>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 1 KGEGHLEIQ 9
KGE HLEIQ
Sbjct: 62 KGESHLEIQ 70


>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 1 KGEGHLEIQ 9
KGE HLEIQ
Sbjct: 62 KGESHLEIQ 70


>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 1 KGEGHLEIQ 9
+GE HLEIQ
Sbjct: 62 EGESHLEIQ 70


>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 1 KGEGHLEIQ 9
KG HLEIQ
Sbjct: 62 KGNSHLEIQ 70


>sp|VIF_HV2RO|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 1 KGEGHLEIQ 9
KG HLEIQ
Sbjct: 62 KGNSHLEIQ 70


>sp|ICP46_FRG3G|IMMEDIATE-EARLY protein ICP-46|Frog virus 3 (isolate Goorha)

Query: 1 KGEGHLEIQC 10
+GE H+E+ C
Sbjct: 264 EGEAHIEVLC 273


>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 1 KGEGHLEIQ 9
+G+ HLEIQ
Sbjct: 62 QGKSHLEIQ 70


>sp|VIF_SIVSP|VIRION infectivity factor|Simian immunodeficiency virus (isolate

Query: 1 KGEGHLEIQ 9
K E HLE+Q
Sbjct: 62 KDEAHLEVQ 70


>sp|NV_IHNVW|NON-VIRION protein|Infectious hematopoietic necrosis virus (strain

Query: 1 KGEGHL 6
KGEGHL
Sbjct: 73 KGEGHL 78


>sp|NV_IHNVR|NON-VIRION protein|Infectious hematopoietic necrosis virus (strain

Query: 1 KGEGHL 6
KGEGHL
Sbjct: 73 KGEGHL 78


>sp|NV_IHNVO|NON-VIRION protein|Infectious hematopoietic necrosis virus (strain

Query: 1 KGEGHL 6
KGEGHL
Sbjct: 73 KGEGHL 78


>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 1 KGEGHLEIQ 9
+G HLEIQ
Sbjct: 62 QGNSHLEIQ 70


>sp|YR840_MIMIV|PUTATIVE ankyrin repeat protein R840|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GEGHLEI 8
G GHLEI
Sbjct: 416 GNGHLEI 422


Query: 2 GEGHLEI 8
G GHLE+
Sbjct: 266 GNGHLEV 272


>sp|REP_PCV1|REPLICATION-ASSOCIATED protein|Porcine circovirus 1 (PCV1)

Query: 3 EGHLEIQC 10
EGH+ I+C
Sbjct: 97 EGHILIEC 104


>sp|TGB1_PVXX3|MOVEMENT and silencing protein TGBp1|Potato virus X (strain X3)

Query: 3 EGHLEI 8
EGHLEI
Sbjct: 143 EGHLEI 148


>sp|TGB1_PVXCP|MOVEMENT and silencing protein TGBp1|Potato virus X (strain CP)

Query: 3 EGHLEI 8
EGHLEI
Sbjct: 143 EGHLEI 148


>sp|TGB1_PVX|MOVEMENT and silencing protein TGBp1|Potato virus X (PVX)

Query: 3 EGHLEI 8
EGHLEI
Sbjct: 143 EGHLEI 148


>sp|YR845_MIMIV|PUTATIVE ankyrin repeat protein R845|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GEGHLEI 8
G+GHLE+
Sbjct: 175 GKGHLEV 181


>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P

Query: 4 GHLEIQC 10
GHL+I C
Sbjct: 63 GHLDIAC 69


>sp|YR911_MIMIV|PUTATIVE ankyrin repeat protein R911|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GEGHLEI 8
G GHLE+
Sbjct: 149 GNGHLEV 155


Query: 2 GEGHLEI 8
G GHLE+
Sbjct: 359 GNGHLEV 365


>sp|YL062_MIMIV|PUTATIVE ankyrin repeat protein L62|Acanthamoeba polyphaga mimivirus

Query: 2 GEGHLEI 8
G GHLE+
Sbjct: 85 GNGHLEV 91


>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate

Query: 1 KGEGHLEIQC 10
K EGH+ ++C
Sbjct: 112 KIEGHIFVKC 121


>sp|DPOL_HIS1I|DNA polymerase|His1 virus (isolate Australia/Victoria) (His1V)

Query: 1 KGEGHLEIQ 9
K GH+EI+
Sbjct: 648 KANGHIEIE 656


>sp|TGB1_PVXHB|MOVEMENT and silencing protein TGBp1|Potato virus X (strain HB)

Query: 3 EGHLEI 8
EGHLE+
Sbjct: 143 EGHLEV 148


>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)

Query: 2 GEGHLEIQC 10
G HL+I+C
Sbjct: 272 GISHLDIKC 280


>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)

Query: 2 GEGHLEIQC 10
G HL+I+C
Sbjct: 272 GISHLDIKC 280


>sp|POLN_SAV2|POLYPROTEIN P1234|Alphavirus salmon subtype 2 (SAV2)

Query: 1 KGEGHL 6
KG+GHL
Sbjct: 120 KGDGHL 125


>sp|PB2_QRFVE|POLYMERASE basic protein 2|Quaranfil virus (isolate

Query: 2 GEGHLEIQC 10
G+G ++I+C
Sbjct: 482 GDGEIKIRC 490


>sp|YL025_MIMIV|PUTATIVE ankyrin repeat protein L25|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GEGHLEI 8
GEGH++I
Sbjct: 315 GEGHIKI 321




75|SequenceR|380|371|NYQMMKGEGH

>sp|YO13_ADEG1|UNCHARACTERIZED protein ORF13|Fowl adenovirus A serotype 1

Query: 2 YQMMKGEGH 10
+QMM+ EG+
Sbjct: 151 HQMMEAEGY 159


>sp|L_LBVAV|RNA-DIRECTED RNA polymerase L|Lettuce big-vein associated virus (isolate

Query: 1 NYQMMKGEG 9
+Y MMKG G
Sbjct: 1783 SYYMMKGAG 1791


>sp|DARB_BPP1|DEFENSE against restriction protein B|Escherichia phage P1 (Bacteriophage

Query: 2 YQMMKGEGH 10
YQ MK GH
Sbjct: 477 YQDMKAAGH 485


>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 1 NYQMMKGEG 9
+Y+M+ GEG
Sbjct: 348 SYEMLIGEG 356


>sp|001R_FRG3G|PUTATIVE transcription factor 001R|Frog virus 3 (isolate Goorha)

Query: 2 YQMMKGEGH 10
YQ++K GH
Sbjct: 211 YQLLKKHGH 219


>sp|PRO_JSRV|GAG-PRO polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 1 NYQMMKGEG 9
+Y+M+ GEG
Sbjct: 348 SYEMLIGEG 356


>sp|GAG_JSRV|GAG polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 1 NYQMMKGEG 9
+Y+M+ GEG
Sbjct: 348 SYEMLIGEG 356




76|SequenceR|385|376|VKISVNYQMM

>sp|YR542_MIMIV|PUTATIVE F-box/LRR-repeat protein R542|Acanthamoeba polyphaga mimivirus

Query: 1 VKISVNYQM 9
VKIS NYQ+
Sbjct: 462 VKISNNYQI 470


>sp|FIBP_BPT4|LONG-TAIL fiber proximal subunit|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 VKISVNY 7
VKIS+NY
Sbjct: 345 VKISMNY 351




77|SequenceR|390|381|FYEGNVKISV

>sp|RDRP_CGMVS|REPLICASE large subunit|Cucumber green mottle mosaic virus

Query: 1 FYEGNVKIS 9
F GNVKIS
Sbjct: 369 FLSGNVKIS 377


>sp|UL130_HCMVM|ENVELOPE glycoprotein UL130|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 EGNVKISV 10
+GNV+ISV
Sbjct: 134 DGNVQISV 141


>sp|UL130_HCMVA|UNCHARACTERIZED protein UL130|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 EGNVKISV 10
+GNV+ISV
Sbjct: 134 DGNVQISV 141


>sp|SPI1_MYXVL|SERINE proteinase inhibitor 1|Myxoma virus (strain Lausanne) (MYXV)

Query: 1 FYEGNVKISV 10
FY GNV V
Sbjct: 168 FYSGNVTYKV 177


>sp|NSP1_ROTEH|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Equine/United

Query: 1 FYEGNVKI 8
FYEG+V +
Sbjct: 160 FYEGSVSV 167




78|SequenceR|395|386|ELESLFYEGN

>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37

Query: 1 ELESLFYEGN 10
+LE LF EGN
Sbjct: 34 DLEKLFEEGN 43


>sp|POLG_BSTV1|GENOME polyprotein|Brome streak virus (strain 11-Cal)

Query: 1 ELESLFYEG 9
E+E L++EG
Sbjct: 2745 EIEQLYFEG 2753


>sp|RDRP_PVXX3|RNA replication protein|Potato virus X (strain X3)

Query: 1 ELESLFYEGN 10
E+ESLF +G+
Sbjct: 447 EMESLFSDGD 456


>sp|D5_FOWPN|PRIMASE D5|Fowlpox virus (strain NVSL) (FPV)

Query: 3 ESLFYEGN 10
+S+FY+GN
Sbjct: 428 DSIFYQGN 435


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 4 SLFYEGN 10
SLFYE N
Sbjct: 1074 SLFYENN 1080


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 4 SLFYEGN 10
SLFYE N
Sbjct: 1074 SLFYENN 1080




79|SequenceR|400|391|YETAPELESL

>sp|463L_IIV6|PROBABLE lipid hydrolase 463L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 YETAPELESL 10
YET P++E L
Sbjct: 160 YETTPDMEIL 169


>sp|POL_BAEVM|GAG-POL polyprotein|Baboon endogenous virus (strain M7)

Query: 1 YETAPELESL 10
YETAP ESL
Sbjct: 331 YETAPGRESL 340


>sp|GAG_BAEVM|GAG polyprotein|Baboon endogenous virus (strain M7)

Query: 1 YETAPELESL 10
YETAP ESL
Sbjct: 331 YETAPGRESL 340


>sp|V212_FOWPN|PROBABLE serine/threonine-protein kinase FPV212|Fowlpox virus (strain NVSL)

Query: 1 YETAPELESL 10
YE AP ESL
Sbjct: 289 YEEAPNYESL 298


>sp|RDRP_LOLV|RNA-DIRECTED RNA polymerase|Lolium latent virus (isolate Lolium/USA/US1/-)

Query: 1 YETAPELESL 10
+ET+P+LE+L
Sbjct: 170 FETSPKLENL 179


>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)

Query: 2 ETAPELES 9
ETA ELES
Sbjct: 563 ETAKELES 570


>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 2 ETAPELES 9
ETA ELES
Sbjct: 563 ETAKELES 570


>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)

Query: 2 ETAPELES 9
ETA ELES
Sbjct: 559 ETAKELES 566


>sp|MCES_VARV|MRNA-CAPPING enzyme regulatory subunit|Variola virus

Query: 1 YETAPEL 7
YET PEL
Sbjct: 19 YETLPEL 25


>sp|MCES_VAR67|MRNA-CAPPING enzyme regulatory subunit OPG124|Variola virus (isolate

Query: 1 YETAPEL 7
YET PEL
Sbjct: 19 YETLPEL 25


>sp|MCES_VACCW|MRNA-CAPPING enzyme regulatory subunit OPG124|Vaccinia virus (strain Western

Query: 1 YETAPEL 7
YET PEL
Sbjct: 19 YETLPEL 25


>sp|MCES_VACCC|MRNA-CAPPING enzyme regulatory subunit OPG124|Vaccinia virus (strain

Query: 1 YETAPEL 7
YET PEL
Sbjct: 19 YETLPEL 25


>sp|MCES_VACCA|MRNA-CAPPING enzyme regulatory subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 1 YETAPEL 7
YET PEL
Sbjct: 19 YETLPEL 25


>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)

Query: 2 ETAPELES 9
ETA ELES
Sbjct: 563 ETAKELES 570


>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)

Query: 2 ETAPELES 9
ETA ELES
Sbjct: 563 ETAKELES 570


>sp|MCES_MONPV|MRNA-CAPPING enzyme regulatory subunit OPG124|Monkeypox virus (MPXV)

Query: 1 YETAPEL 7
YET PEL
Sbjct: 19 YETLPEL 25


>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)

Query: 2 ETAPELES 9
ETA ELES
Sbjct: 558 ETAKELES 565


>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)

Query: 2 ETAPELES 9
ETA ELES
Sbjct: 556 ETAKELES 563


>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7

Query: 1 YETAPELESL 10
Y T PE E+L
Sbjct: 390 YNTTPEQEAL 399


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 1 YETAPELESL 10
Y+ P+LESL
Sbjct: 1344 YKILPDLESL 1353




80|SequenceR|405|396|RVRAMYETAP

>sp|PCNA_NPVOP|PROBABLE DNA polymerase sliding clamp|Orgyia pseudotsugata multicapsid

Query: 1 RVRAMYETA 9
RVR YETA
Sbjct: 97 RVRLAYETA 105




81|SequenceR|410|401|SADACRVRAM

>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 1 SADACRVRA 9
SA+AC VRA
Sbjct: 362 SAEACLVRA 370




82|SequenceR|415|406|WKWFHSADAC

>sp|DIT9_BPNF|TAIL knob protein gp9|Bacillus phage Nf (Bacteriophage Nf)

Query: 2 KWFHSADA 9
+WF SADA
Sbjct: 27 RWFTSADA 34


>sp|L_MOKV|LARGE structural protein|Mokola virus (MOKV)

Query: 1 WKWFHS 6
WK+FHS
Sbjct: 1777 WKYFHS 1782


>sp|DPOL_MIMIV|DNA polymerase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 KWFHSADAC 10
KW S D C
Sbjct: 1723 KWISSTDKC 1731


>sp|DIT9_BPB03|TAIL knob protein gp9|Bacillus phage B103 (Bacteriophage B103)

Query: 2 KWFHSADA 9
+WF +ADA
Sbjct: 27 RWFTNADA 34


>sp|CAPSD_SMSV4|CAPSID protein VP1|San Miguel sea lion virus

Query: 2 KWFHSAD 8
KWFH D
Sbjct: 429 KWFHVID 435


>sp|DTX_COROM|DIPHTHERIA toxin|Corynephage omega

Query: 1 WKWFHSAD 8
WK F+S D
Sbjct: 75 WKGFYSTD 82


>sp|DTX_CORBE|DIPHTHERIA toxin|Corynephage beta

Query: 1 WKWFHSAD 8
WK F+S D
Sbjct: 82 WKGFYSTD 89


>sp|DTXH_CORBE|DIPHTHERIA toxin homolog CRM228|Corynephage beta

Query: 1 WKWFHSAD 8
WK F+S D
Sbjct: 75 WKGFYSTD 82


>sp|CAPSD_TTVV8|CAPSID protein|Torque teno virus (isolate Chimpanzee/Japan/Pt-TTV6/2000)

Query: 2 KWFHSADAC 10
KW+ D C
Sbjct: 226 KWYSQTDIC 234


>sp|NSP_SCSVF|PUTATIVE nuclear shuttle protein|Subterranean clover stunt virus (strain

Query: 3 WFHSA 7
WFHSA
Sbjct: 4 WFHSA 8


>sp|PRIM_PSHV1|DNA primase|Psittacid herpesvirus 1 (isolate Amazon

Query: 5 HSADAC 10
HSAD C
Sbjct: 113 HSADTC 118


>sp|POL2_CNSV|RNA2 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 3 WFHSADA 9
W HS+DA
Sbjct: 479 WGHSSDA 485


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 WFHSADAC 10
WF +D+C
Sbjct: 3554 WFVQSDSC 3561


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 3 WFHSADAC 10
WF +D+C
Sbjct: 3497 WFVQSDSC 3504


>sp|YG29_BPSP1|UNCHARACTERIZED 16.2 kDa protein in|Bacillus phage SP01 (Bacteriophage SP01)

Query: 3 WFHSADAC 10
WF++ AC
Sbjct: 93 WFYALTAC 100


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 WFHSADAC 10
WF +D+C
Sbjct: 3554 WFVQSDSC 3561


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 3 WFHSADAC 10
WF +D+C
Sbjct: 3551 WFVQSDSC 3558


>sp|GAG_IPMA|INTRACISTERNAL A-particle Gag-related polyprotein|Mouse intracisternal a-particle

Query: 2 KWFHSADAC 10
K +H AD C
Sbjct: 491 KGYHRADQC 499


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 3 WFHSADAC 10
WF +D+C
Sbjct: 3497 WFVQSDSC 3504


>sp|G3P_BPPF1|ATTACHMENT protein G3P|Pseudomonas phage Pf1 (Bacteriophage Pf1)

Query: 1 WKWFHSADAC 10
WK F D C
Sbjct: 105 WKLFRKGDQC 114


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 3 WFHSADAC 10
WF +D+C
Sbjct: 3551 WFVQSDSC 3558


>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus

Query: 2 KWFHSADA 9
KWF S+D
Sbjct: 182 KWFTSSDG 189


>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)

Query: 2 KWFHSADAC 10
KW+ D C
Sbjct: 229 KWYFQKDIC 237


>sp|POL2_BRSV|RNA2 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 3 WFHSADA 9
W HS+DA
Sbjct: 626 WGHSSDA 632




83|SequenceR|420|411|GSWESWKWFH

>sp|GP_TSWVR|ENVELOPMENT polyprotein|Tomato spotted wilt virus (strain

Query: 3 WESWKWFH 10
W S +WFH
Sbjct: 423 WTSMEWFH 430


>sp|GP_TSWVD|ENVELOPMENT polyprotein|Tomato spotted wilt virus (isolate

Query: 3 WESWKWFH 10
W S +WFH
Sbjct: 423 WTSMEWFH 430


>sp|GP_TSWV1|ENVELOPMENT polyprotein|Tomato spotted wilt virus (strain

Query: 3 WESWKWFH 10
W S +WFH
Sbjct: 423 WTSMEWFH 430


>sp|GP_TSWV|ENVELOPMENT polyprotein|Tomato spotted wilt virus (TSWV)

Query: 3 WESWKWFH 10
W S +WFH
Sbjct: 423 WTSMEWFH 430


>sp|GP_INSV|ENVELOPMENT polyprotein|Impatiens necrotic spot virus (INSV)

Query: 2 SWESWKWFH 10
+W S +WFH
Sbjct: 397 NWASIEWFH 405


>sp|CAPSD_BPPAJ|CAPSID polyprotein|Pseudomonas phage PAJU2

Query: 1 GSWE----SWKWF 9
GSW SW+WF
Sbjct: 122 GSWGLRFLSWEWF 134


>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain

Query: 1 GSWESWKWF 9
GSW + WF
Sbjct: 1138 GSWNFFDWF 1146


>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)

Query: 1 GSWESWKWF 9
GSW + WF
Sbjct: 1138 GSWNFFDWF 1146


>sp|VP6_LDCPR|MICROTUBULE-ASSOCIATED protein VP6|Lymantria dispar cypovirus 1 (isolate

Query: 2 SWESWKWFH 10
S + WKW H
Sbjct: 553 SIKRWKWVH 561


>sp|VP75_SHV21|PROBABLE membrane antigen 75|Saimiriine herpesvirus 2 (strain 11)

Query: 2 SWESWKWFH 10
S+ +W+W H
Sbjct: 1267 SFHTWQWQH 1275


>sp|1A_CMVQ|REPLICATION protein 1a|Cucumber mosaic virus (strain Q)

Query: 6 WKWF 9
WKWF
Sbjct: 450 WKWF 453


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 3 WESWKW 8
WE+W W
Sbjct: 776 WENWFW 781


>sp|VNS2_BTV10|NON-STRUCTURAL protein NS2|Bluetongue virus 10 (isolate USA)

Query: 3 WESWKW 8
WE WK+
Sbjct: 91 WEEWKF 96


>sp|VNS2_BTV17|NON-STRUCTURAL protein NS2|Bluetongue virus 17 (isolate USA)

Query: 3 WESWKW 8
WE WK+
Sbjct: 91 WEEWKF 96


>sp|VNS2_BTV1X|NON-STRUCTURAL protein NS2|Bluetongue virus 10 (BTV 10)

Query: 3 WESWKW 8
WE WK+
Sbjct: 91 WEEWKF 96


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 3 WESWKW 8
WE W W
Sbjct: 1978 WEVWDW 1983


>sp|VNS2_EHDV2|NON-STRUCTURAL protein NS2|Epizootic hemorrhagic disease virus 2

Query: 3 WESWKW 8
WE WK+
Sbjct: 91 WEEWKF 96


>sp|VNS2_BTV1S|NON-STRUCTURAL protein NS2|Bluetongue virus 1 (isolate South

Query: 3 WESWKW 8
WE WK+
Sbjct: 91 WEEWKF 96


>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 2 SWESWKW 8
SW WK+
Sbjct: 357 SWPEWKY 363


>sp|RDRP_SHVX|RNA replication protein|Shallot virus X (ShVX)

Query: 2 SWESWKWFH 10
+W WFH
Sbjct: 452 TWTLLAWFH 460


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 3 WESWKW 8
WES KW
Sbjct: 170 WESNKW 175


>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 1 GSWESWKWF 9
G W W++F
Sbjct: 1835 GGWFMWEYF 1843


>sp|POLG_ZYMVR|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 1 GSWESWKWF 9
G W W++F
Sbjct: 1835 GGWFMWEYF 1843


>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 1 GSWESWKWF 9
G W W++F
Sbjct: 1832 GGWFMWEYF 1840


>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)

Query: 1 GSWESW 6
G WE W
Sbjct: 318 GRWERW 323


>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)

Query: 1 GSWESW 6
G WE W
Sbjct: 318 GRWERW 323


>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)

Query: 1 GSWESW 6
G WE W
Sbjct: 318 GRWERW 323


>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)

Query: 1 GSWESW 6
G WE W
Sbjct: 318 GRWERW 323


>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann

Query: 1 GSWESW 6
G WE W
Sbjct: 318 GRWERW 323


>sp|L_MOKV|LARGE structural protein|Mokola virus (MOKV)

Query: 5 SWKWFH 10
+WK+FH
Sbjct: 1776 TWKYFH 1781


>sp|VP03_ALHV1|PROBABLE tegument protein antigen 3|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 SWESWKWFH 10
++ +W+W H
Sbjct: 1282 AFNTWQWQH 1290


>sp|FIBL1_BPT5|SIDE tail fiber protein pb1|Escherichia phage T5 (Enterobacteria phage

Query: 1 GSWESWK 7
G+W +W+
Sbjct: 781 GTWSAWR 787


>sp|RIR1_EHV2|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Equine herpesvirus 2 (strain 86/87)

Query: 3 WESW 6
WESW
Sbjct: 573 WESW 576


>sp|VP4_ROTPC|OUTER capsid protein VP4|Rotavirus C (strain RVC/Pig/United

Query: 2 SWESWK 7
+WE WK
Sbjct: 196 NWEEWK 201


>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)

Query: 1 GSWESWKWF 9
G+W + WF
Sbjct: 1824 GAWLLYTWF 1832


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 5 SWKWFH 10
+WKW H
Sbjct: 1339 AWKWAH 1344


>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 SWESWK 7
SWE+W+
Sbjct: 889 SWETWR 894


>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 GSWESWKWF 9
GSW +WF
Sbjct: 123 GSWNYIQWF 131


>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)

Query: 2 SWESWK 7
SWES+K
Sbjct: 512 SWESYK 517


>sp|GLYCO_WCBV|GLYCOPROTEIN Caucasian bat virus (WCBV)

Query: 2 SWESWK 7
SWES+K
Sbjct: 515 SWESYK 520


>sp|GAG_SCVLA|MAJOR capsid protein|Saccharomyces cerevisiae virus L-A (ScV-L-A)

Query: 5 SWKWF 9
SW+W+
Sbjct: 113 SWRWY 117


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 GSWESWKWFH 10
G WE W +
Sbjct: 5011 GGWEEDSWLY 5020


>sp|TIPJ_BPSE4|TIP attachment protein J|Escherichia phage SECphi4

Query: 6 WKWFH 10
WKW H
Sbjct: 753 WKWNH 757


>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus

Query: 1 GSWESWKWF 9
G W W +F
Sbjct: 1841 GGWMLWDYF 1849


>sp|GLYCO_EBLV1|GLYCOPROTEIN bat lyssavirus 1 (strain

Query: 2 SWESWK 7
SWES+K
Sbjct: 512 SWESYK 517


>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)

Query: 2 SWESWK 7
SWES+K
Sbjct: 512 SWESYK 517


>sp|GLYCO_ARAV|GLYCOPROTEIN virus (ARAV)

Query: 2 SWESWK 7
SWES+K
Sbjct: 512 SWESYK 517


>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 1 GSWESWKWF 9
G W W +F
Sbjct: 1832 GGWMLWDYF 1840


>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)

Query: 2 SWESWK 7
SWES+K
Sbjct: 512 SWESYK 517




84|SequenceR|425|416|TTFNQGSWES

>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 2 TFNQGSW 8
TF++GSW
Sbjct: 300 TFHRGSW 306


>sp|ENLYS_BPT4|ENDOLYSIN phage T4 (Bacteriophage T4)

Query: 1 TTFNQGSWES 10
TTF G+W++
Sbjct: 151 TTFRTGTWDA 160


>sp|IE63_ALHV1|IMMEDIATE-EARLY phosphoprotein 57|Alcelaphine herpesvirus 1 (strain C500)

Query: 4 NQGSWES 10
NQGSW++
Sbjct: 279 NQGSWKA 285


>sp|P3_RGDV|OUTER capsid protein P3|Rice gall dwarf virus (RGDV)

Query: 1 TTFNQGSWE 9
TTF++ +WE
Sbjct: 729 TTFSKEAWE 737


>sp|GH_GAHVR|ENVELOPE glycoprotein H|Gallid herpesvirus 2 (strain RB-1b)

Query: 4 NQGSW 8
NQGSW
Sbjct: 54 NQGSW 58


>sp|GH_GAHVM|ENVELOPE glycoprotein H|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 4 NQGSW 8
NQGSW
Sbjct: 54 NQGSW 58


>sp|VPB_ARV|PROTEIN beta|Adelaide River virus (ARV)

Query: 1 TTFNQGSWE 9
T +N G W+
Sbjct: 62 TVYNHGRWK 70


>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 5 QGSWE 9
QGSWE
Sbjct: 614 QGSWE 618


>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4

Query: 2 TFNQGSWES 10
TF G+W+S
Sbjct: 554 TFTDGTWKS 562


>sp|HEMA_CDVO|HEMAGGLUTININ glycoprotein|Canine distemper virus (strain Onderstepoort)

Query: 4 NQGSWE 9
NQ SWE
Sbjct: 391 NQASWE 396


>sp|KR15_ICHVA|PROTEIN kinase ORF15|Ictalurid herpesvirus 1 (strain Auburn)

Query: 4 NQGSWE 9
NQG WE
Sbjct: 308 NQGLWE 313


>sp|DPO21_BPK64|DEPOLYMERASE, capsule KN5-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 2 TFNQGSWES 10
+FN G WE+
Sbjct: 71 SFNTGDWEN 79


>sp|TGB1_POPMV|MOVEMENT and silencing protein TGBp1|Poplar mosaic virus (isolate ATCC

Query: 3 FNQGSWE 9
+ +GSWE
Sbjct: 86 YTEGSWE 92


>sp|HFT_BPCA1|HEAD fiber trimeric protein|Bacteroides phage crAss001 (Bacteroides

Query: 3 FNQGSWES 10
FN G WE+
Sbjct: 29 FNNGEWET 36


>sp|FIBER_BPT3|TAIL fiber protein|Enterobacteria phage T3 (Bacteriophage T3)

Query: 2 TFNQGSWES 10
T NQ SW++
Sbjct: 156 TMNQNSWQA 164




85|SequenceR|430|421|PAAELTTFNQ

***** No hits found ******


86|SequenceR|435|426|DPAESPAAEL

>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41

Query: 2 PAESPAAE 9
P E+PAAE
Sbjct: 20 PVENPAAE 27


>sp|NSP4_RGDV|NON-STRUCTURAL protein 4|Rice gall dwarf virus (RGDV)

Query: 1 DPAESPAAEL 10
DPA S +AEL
Sbjct: 147 DPANSDSAEL 156




87|SequenceR|440|431|VIRWVDPAES

>sp|YR366_MIMIV|PUTATIVE ATP-dependent RNA helicase R366|Acanthamoeba polyphaga mimivirus

Query: 3 RWVDPAES 10
+W+DP++S
Sbjct: 1418 QWIDPSKS 1425


>sp|ENV_IPMAE|ENVELOPE glycoprotein|Mouse intracisternal a-particle MIAE (IAP-MIAE)

Query: 1 VIRWVDPAES 10
+IRWVD +++
Sbjct: 181 IIRWVDQSKT 190


>sp|RDRP_PVX|RNA replication protein|Potato virus X (PVX)

Query: 2 IRWVDPAES 10
I+W DP +S
Sbjct: 229 IKWRDPKDS 237


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 3 RWVDPAE 9
RW+ PAE
Sbjct: 1442 RWIIPAE 1448


>sp|RDRP_PVXX3|RNA replication protein|Potato virus X (strain X3)

Query: 2 IRWVDPAES 10
I+W DP +S
Sbjct: 229 IKWRDPKDS 237


>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)

Query: 2 IRWVDPAES 10
+ WVDP S
Sbjct: 943 LEWVDPDSS 951


>sp|GP_PHV|ENVELOPMENT polyprotein|Prospect Hill virus (PHV)

Query: 2 IRWVDPAES 10
+ WVDP S
Sbjct: 944 LEWVDPDSS 952


>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2 IRWVDPAES 10
+ W+DP S
Sbjct: 942 LEWIDPDSS 950


>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)

Query: 2 IRWVDPAES 10
+ W+DP S
Sbjct: 948 LEWIDPDSS 956


>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)

Query: 2 IRWVDPAES 10
+ W+DP S
Sbjct: 948 LEWIDPDSS 956


>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 2 IRWVDPAES 10
+ W+DP S
Sbjct: 948 LEWIDPDSS 956


>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)

Query: 2 IRWVDPAES 10
+ W+DP S
Sbjct: 133 LEWIDPDSS 141


>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)

Query: 2 IRWVDPAES 10
+ W+DP S
Sbjct: 942 LEWIDPDSS 950


>sp|RIR2_ASFM2|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|African swine fever virus (isolate

Query: 1 VIRWVDPAES 10
V +W+DPA +
Sbjct: 142 VRQWMDPARN 151


>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 1 VIRWVDP 7
++RW DP
Sbjct: 1666 LVRWKDP 1672


>sp|GP_PUUMU|ENVELOPE glycoprotein|Puumala virus (strain Udmurtia/894CG/91)

Query: 2 IRWVDPAES 10
+ W+DP S
Sbjct: 36 LEWIDPDSS 44




88|SequenceR|445|436|GPELSVIRWV

>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 1 GPELSVIRW 9
GP L+V++W
Sbjct: 1211 GPVLNVLKW 1219


>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P

Query: 2 PELSVIRWV 10
P L V RWV
Sbjct: 490 PRLPVYRWV 498


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 PELSVIRW 9
P+L V++W
Sbjct: 3914 PDLKVVKW 3921


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 PELSVIRW 9
P+L V++W
Sbjct: 3914 PDLKVVKW 3921


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 2 PELSVIRW 9
P+L V++W
Sbjct: 3903 PDLRVVKW 3910


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 2 PELSVIRW 9
P+L V++W
Sbjct: 3903 PDLRVVKW 3910


>sp|ENV_IPMAE|ENVELOPE glycoprotein|Mouse intracisternal a-particle MIAE (IAP-MIAE)

Query: 5 SVIRWV 10
S+IRWV
Sbjct: 180 SIIRWV 185




89|SequenceR|450|441|TVTHNGPELS

>sp|VF359_IIV3|UNCHARACTERIZED protein 105R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 TVTHNGP 7
TV HNGP
Sbjct: 33 TVNHNGP 39


>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1 TVTHNGPELS 10
T H+GPE+S
Sbjct: 6 TYRHHGPEVS 15


>sp|US03_PSHV1|PROTEIN kinase US3 homolog|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 TVTHNGPEL 9
TVT N PE+
Sbjct: 320 TVTTNSPEM 328


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 4 HNGPEL 9
HNGPE+
Sbjct: 2115 HNGPEI 2120


>sp|ENV_FFV|ENVELOPE glycoprotein gp130|Feline foamy virus (FFV) (Feline

Query: 2 VTHNGPELS 10
+TH GP LS
Sbjct: 97 ITHPGPVLS 105


>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)

Query: 2 VTHNGPELS 10
+ HNGP+ S
Sbjct: 153 LQHNGPQQS 161


>sp|MCP_SHV21|MAJOR capsid protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 TVTHNGP 7
T+T+NGP
Sbjct: 828 TLTYNGP 834


>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P

Query: 2 VTHNGPE 8
V+H+GPE
Sbjct: 711 VSHSGPE 717


>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)

Query: 2 VTHNGPELS 10
+ HNGP+ S
Sbjct: 153 LQHNGPQQS 161


>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 1 TVTHNGP 7
T+T+NGP
Sbjct: 832 TLTYNGP 838




90|SequenceR|455|446|PKWFLTVTHN

>sp|PG065_VAR67|RNA-BINDING protein OPG065|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 PKWFLT 6
P+WF+T
Sbjct: 64 PRWFMT 69


>sp|PG065_VACCW|RNA-BINDING protein OPG065|Vaccinia virus (strain Western Reserve)

Query: 1 PKWFLT 6
P+WF+T
Sbjct: 64 PRWFMT 69


>sp|PG065_VACCC|RNA-BINDING protein OPG065|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 PKWFLT 6
P+WF+T
Sbjct: 64 PRWFMT 69


>sp|RDRP_MYRV9|RNA-DIRECTED RNA polymerase VP1|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 1 PKWFLTVTHN 10
PK F THN
Sbjct: 629 PKMFFQSTHN 638


>sp|VP2_BTV1S|OUTER capsid protein VP2|Bluetongue virus 1 (isolate South

Query: 3 WFLTVTH 9
W+L +TH
Sbjct: 860 WYLPITH 866


>sp|VP2_BTV1V|OUTER capsid protein VP2|Bluetongue virus 1 (isolate South

Query: 3 WFLTVTH 9
W+L +TH
Sbjct: 860 WYLPITH 866


>sp|VP2_BTV1A|OUTER capsid protein VP2|Bluetongue virus 1 (isolate Australia)

Query: 3 WFLTVTH 9
W+L +TH
Sbjct: 860 WYLPITH 866


>sp|VP2_BTV3V|OUTER capsid protein VP2|Bluetongue virus 3 (isolate South

Query: 3 WFLTVTH 9
W+L +TH
Sbjct: 858 WYLPITH 864


>sp|VP2_BTV13|OUTER capsid protein VP2|Bluetongue virus 13 (isolate USA)

Query: 3 WFLTVTH 9
W+L +TH
Sbjct: 858 WYLPITH 864


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 PKWFLTVT 8
PK+F TVT
Sbjct: 5715 PKYFNTVT 5722


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 PKWFLTVT 8
PK+F TVT
Sbjct: 5715 PKYFNTVT 5722


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 PKWFLTVT 8
PK+F TVT
Sbjct: 5715 PKYFNTVT 5722


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 PKWFLTVT 8
PK+F TVT
Sbjct: 5715 PKYFNTVT 5722


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 PKWFLTVT 8
PK+F TVT
Sbjct: 5715 PKYFNTVT 5722


>sp|VG341_BPMD2|GENE 34.1 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 PKWFLTVTH 9
P W L TH
Sbjct: 107 PLWLLASTH 115


>sp|REP_SPV4|REPLICATION-ASSOCIATED protein ORF2|Spiroplasma virus 4 (SpV4)

Query: 3 WFLTVTHN 10
WF+T+T++
Sbjct: 75 WFVTLTYS 82




91|SequenceR|460|451|HLKSLPKWFL

>sp|RDRP_POLVP|RNA-DIRECTED RNA polymerase|Pothos latent virus (isolate Pigeonpea/India)

Query: 2 LKSLPKWF 9
LK+LP WF
Sbjct: 567 LKALPDWF 574


>sp|VEAC_BPP22|EAC protein|Salmonella phage P22 (Bacteriophage P22)

Query: 2 LKSLPKW 8
LKSLP+W
Sbjct: 119 LKSLPEW 125


>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann

Query: 3 KSLPKWF 9
+S PKWF
Sbjct: 376 RSFPKWF 382


>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)

Query: 3 KSLPKWF 9
+S PKWF
Sbjct: 376 RSFPKWF 382


>sp|LTP_PSHV1|LARGE tegument protein deneddylase|Psittacid herpesvirus 1 (isolate Amazon

Query: 5 LPKWFL 10
+PKWFL
Sbjct: 1727 VPKWFL 1732


>sp|LTP_GAHVM|LARGE tegument protein deneddylase|Gallid herpesvirus 2 (strain

Query: 3 KSLPKWF 9
K LPKW+
Sbjct: 1921 KRLPKWY 1927


>sp|VP1_POVMK|MAJOR capsid protein VP1|Murine polyomavirus (strain Kilham) (MPyV)

Query: 1 HLKSLPKWF 9
HL+ LP++F
Sbjct: 277 HLRGLPRYF 285


>sp|CAPSD_APRVF|INNER capsid protein VP3|Aedes pseudoscutellaris reovirus (isolate

Query: 3 KSLPKWF 9
+++PKWF
Sbjct: 400 QNIPKWF 406


>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 3 KSLPKWF 9
+S P+WF
Sbjct: 376 RSFPRWF 382


>sp|POL1_BBWVS|RNA1 polyprotein|Broad bean wilt virus 1

Query: 1 HLKSLPKW 8
++SLPKW
Sbjct: 806 QIESLPKW 813


>sp|SHUT_ADEG1|SHUTOFF protein|Fowl adenovirus A serotype 1

Query: 2 LKSLPKWFL 10
K LPKW L
Sbjct: 342 FKRLPKWRL 350


>sp|I329L_ASFPP|TRANSMEMBRANE protein I329L|African swine fever virus (isolate

Query: 1 HLKSLPKWFL 10
+LK LP++FL
Sbjct: 168 YLKRLPQFFL 177


>sp|I329L_ASFB7|TRANSMEMBRANE protein I329L|African swine fever virus (strain

Query: 1 HLKSLPKWFL 10
+LK LP++FL
Sbjct: 168 YLKRLPQFFL 177


>sp|NCAP_CVM2|NUCLEOPROTEIN coronavirus (strain 2) (MHV-2)

Query: 1 HLKSLPKWFL 10
H + LP+W+
Sbjct: 115 HKQLLPRWYF 124


>sp|RDRP_SCV23|RNA-DIRECTED RNA polymerase|Saccharomyces 23S RNA narnavirus (ScNV-23S)

Query: 2 LKSLPKWF 9
++SLP WF
Sbjct: 653 VQSLPDWF 660


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 4 SLPKWF 9
SLPKW
Sbjct: 2998 SLPKWL 3003


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 4 SLPKWF 9
SLPKW
Sbjct: 2998 SLPKWL 3003


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 4 SLPKWF 9
SLPKW
Sbjct: 2998 SLPKWL 3003


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 4 SLPKWF 9
SLPKW
Sbjct: 2998 SLPKWL 3003


>sp|Y064_OSHVF|UNCHARACTERIZED protein ORF64|Ostreid herpesvirus 1 (isolate France)

Query: 1 HLKSLPKW 8
H+ LP+W
Sbjct: 195 HVDGLPRW 202


>sp|VP6_MYRV9|MICROTUBULE-ASSOCIATED protein VP6|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 4 SLPKWF 9
S+PKW+
Sbjct: 176 SIPKWY 181


>sp|POL1_CPSMV|RNA1 polyprotein|Cowpea severe mosaic virus (strain

Query: 2 LKSLPKWFL 10
++ +PKW+L
Sbjct: 1713 MELVPKWYL 1721


>sp|VF329_ASFP4|TRANSMEMBRANE protein I329L|African swine fever virus (isolate

Query: 1 HLKSLPKWFL 10
+LK LP++FL
Sbjct: 168 YLKLLPQFFL 177


>sp|I329L_ASFWA|TRANSMEMBRANE protein I329L|African swine fever virus (isolate

Query: 1 HLKSLPKWFL 10
+LK LP++FL
Sbjct: 168 YLKLLPQFFL 177


>sp|I329L_ASFM2|TRANSMEMBRANE protein I329L|African swine fever virus (isolate

Query: 1 HLKSLPKWFL 10
+LK LP++FL
Sbjct: 168 YLKLLPQFFL 177


>sp|I329L_ASFK5|TRANSMEMBRANE protein I329L|African swine fever virus (isolate

Query: 1 HLKSLPKWFL 10
+LK LP++FL
Sbjct: 168 YLKLLPQFFL 177


>sp|YR369_MIMIV|UNCHARACTERIZED protein R369|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 HLKSLPK 7
H KSLPK
Sbjct: 127 HKKSLPK 133


>sp|GAG_BIV29|GAG polyprotein|Bovine immunodeficiency virus (strain R29)

Query: 2 LKSLPKWFL 10
L S PKW L
Sbjct: 204 LNSTPKWRL 212


>sp|REV_HV1MN|PROTEIN Rev|Human immunodeficiency virus type 1

Query: 1 HLKSLPKWFL 10
H++S+ W L
Sbjct: 51 HIRSISAWIL 60


>sp|VNS3_JDNVP|PUTATIVE non-structural protein NS3|Junonia coenia densovirus (isolate

Query: 1 HLKSLPKWF 9
HL +P+W
Sbjct: 46 HLNEIPEWL 54


>sp|POL1_BPMV|RNA1 polyprotein|Bean-pod mottle virus (strain Kentucky

Query: 1 HLKSLPKW 8
HL+ +P W
Sbjct: 801 HLEKMPLW 808




92|SequenceR|465|456|IKGNAHLKSL

>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 1 IKGNAHLK 8
+KGN+HL+
Sbjct: 61 LKGNSHLE 68


>sp|VIF_HV2RO|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 1 IKGNAHLK 8
+KGN+HL+
Sbjct: 61 LKGNSHLE 68


>sp|L_MMVR|RNA-DIRECTED RNA polymerase L|Maize mosaic virus (isolate Maize/United

Query: 1 IKGNAHLKSL 10
+ N HLKSL
Sbjct: 987 LAANTHLKSL 996


>sp|L_RYSV|RNA-DIRECTED RNA polymerase L|Rice yellow stunt virus (RYSV)

Query: 3 GNAHLKSL 10
GN HLK L
Sbjct: 1001 GNQHLKEL 1008


>sp|PORTL_BPSAV|PORTAL protein|Salmonella phage ViI

Query: 1 IKGNAHL 7
I GNAHL
Sbjct: 330 ITGNAHL 336


>sp|L_RSVT|RNA-DIRECTED RNA polymerase L|Rice stripe virus (isolate T)

Query: 3 GNAHLKSL 10
GN H KSL
Sbjct: 145 GNYHFKSL 152


>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I86A3|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/Tennessee/5/1986

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I85A7|POLYMERASE acidic protein|Influenza A virus (strain A/Ruddy

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I83A5|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I83A4|POLYMERASE acidic protein|Influenza A virus (strain A/Turkey/Ireland/1378/1983

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I80AD|POLYMERASE acidic protein|Influenza A virus (strain A/Gull/Minnesota/945/1980

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I80A8|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I80A6|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hokkaido/8/1980

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I79A7|POLYMERASE acidic protein|Influenza A virus (strain A/Grey

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I79A1|POLYMERASE acidic protein|Influenza A virus (strain A/Pintail/Alberta/119/1979

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I78AC|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I77AF|POLYMERASE acidic protein|Influenza A virus (strain A/Gull/Maryland/704/1977

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I68A3|POLYMERASE acidic protein|Influenza A virus (strain A/Turkey/Ontario/6118/1968

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I66A1|POLYMERASE acidic protein|Influenza A virus (strain A/Turkey/Wisconsin/1/1966

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I49A1|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Germany/1949

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I34A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fowl

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 498 IKGRSHLRN 506


>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 501 IKGRSHLRN 509


>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 498 IKGRSHLRN 506


>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 482 IKGRSHLRN 490


>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I01A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 28 IKGRSHLRN 36


>sp|PA_I01A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 28 IKGRSHLRN 36


>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31

Query: 1 IKGNAHLKS 9
IKG +HL++
Sbjct: 505 IKGRSHLRN 513


>sp|DPOL_BPPZA|DNA polymerase|Bacillus phage PZA (Bacteriophage PZA)

Query: 2 KGNAHLKS 9
KGN +LKS
Sbjct: 308 KGNEYLKS 315


>sp|DPOL_BPPH2|DNA polymerase|Bacillus phage phi29 (Bacteriophage phi-29)

Query: 2 KGNAHLKS 9
KGN +LKS
Sbjct: 311 KGNEYLKS 318




93|SequenceR|470|461|VNYFLIKGNA

>sp|NCAP_HAZVJ|NUCLEOPROTEIN virus (isolate JC280)

Query: 2 NYFLIKGNA 10
N +LIKGNA
Sbjct: 471 NAYLIKGNA 479


>sp|CAPSD_SCSVF|CAPSID protein|Subterranean clover stunt virus (strain

Query: 1 VNYFLIKGNA 10
VNY ++K N+
Sbjct: 76 VNYLIVKSNS 85


>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7

Query: 3 YFLIKGNA 10
+ LIKGNA
Sbjct: 329 FILIKGNA 336


>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)

Query: 1 VNYFLIKGN 9
+N LIKGN
Sbjct: 449 INSILIKGN 457


>sp|MVP_BTMV|P3N-PIPO polyprotein|Beet mosaic virus (BtMV)

Query: 1 VNYFLIKGN 9
+N LIKGN
Sbjct: 449 INSILIKGN 457


>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 VNYFLIKGN 9
+NY L+K N
Sbjct: 359 LNYLLLKSN 367


>sp|RPB2_IIV6|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 6

Query: 3 YFLIKGN 9
YF+I GN
Sbjct: 193 YFIINGN 199


>sp|CAPSD_SCSVJ|CAPSID protein|Subterranean clover stunt virus (strain

Query: 1 VNYFLIKGNA 10
+NY ++K N+
Sbjct: 77 LNYLIVKSNS 86




94|SequenceR|475|466|LNEVVVNYFL

>sp|POL2_BBWV2|RNA2 polyprotein|Broad bean wilt virus 2

Query: 2 NEVVVNY 8
NEVV+NY
Sbjct: 413 NEVVLNY 419


>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 NEVVVNY 8
NEV++NY
Sbjct: 336 NEVLINY 342


>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 NEVVVNY 8
NEV++NY
Sbjct: 336 NEVLINY 342


>sp|YR405_MIMIV|PUTATIVE RNA methyltransferase R405|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 NEVVVNYF 9
NE V+NYF
Sbjct: 149 NETVINYF 156


>sp|L_AMPV1|RNA-DIRECTED RNA polymerase L|Avian metapneumovirus (isolate Canada

Query: 1 LNEVVVNYFL 10
LNE VVN +L
Sbjct: 4 LNEGVVNVYL 13


>sp|006L_IIV6|PUTATIVE KilA-N domain-containing protein 006L|Invertebrate iridescent virus

Query: 2 NEVVVNYFL 10
N +++NYF+
Sbjct: 117 NNIIINYFV 125




95|SequenceR|480|471|SSPKDLNEVV

>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 SSPKDLNEVV 10
SS KD+NEV+
Sbjct: 620 SSYKDINEVM 629


>sp|AN_EHV1V|ALKALINE nuclease|Equine herpesvirus 1 (strain V592)

Query: 2 SPKDLNEVV 10
SP +LNEVV
Sbjct: 501 SPYNLNEVV 509


>sp|AN_EHV1B|ALKALINE nuclease|Equine herpesvirus 1 (strain Ab4p)

Query: 2 SPKDLNEVV 10
SP +LNEVV
Sbjct: 501 SPYNLNEVV 509


>sp|PG056_CAMPM|PROTEIN OPG056|Camelpox virus (strain M-96)

Query: 1 SSPKDLNEVV 10
SS KD+NEV+
Sbjct: 620 SSYKDINEVM 629




96|SequenceR|485|476|SHLESSSPKD

>sp|VP10_MYRV9|UNCHARACTERIZED protein VP10|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 1 SHLESSSPK 9
SH+E+SSPK
Sbjct: 90 SHVEASSPK 98




97|SequenceR|490|481|APAPISHLES

>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1 APAPISHLE 9
A AP++H+E
Sbjct: 549 AGAPLAHIE 557


>sp|VL1_CRPVK|MAJOR capsid protein L1|Cottontail rabbit papillomavirus (strain Kansas)

Query: 1 APAPISHLES 10
APAP+S ++S
Sbjct: 489 APAPVSIVKS 498


>sp|NP1_HBOC1|NON-STRUCTURAL protein NP-1|Primate bocaparvovirus 1 (strain Human

Query: 4 PISHLES 10
PISHL S
Sbjct: 57 PISHLSS 63




98|SequenceR|495|486|LKTSNAPAPI

>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 LKTSNAPAPI 10
LKT+ PAP+
Sbjct: 957 LKTAGVPAPM 966


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 LKTSNAPAPI 10
LKT+ PAP+
Sbjct: 957 LKTAGVPAPM 966


>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain

Query: 1 LKTSNAPAPI 10
L+ N PAPI
Sbjct: 128 LRNRNQPAPI 137


>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16

Query: 1 LKTSNAPAPI 10
LKTSNA A +
Sbjct: 198 LKTSNAKAAM 207


>sp|Y088_OSHVF|PUTATIVE transmembrane protein ORF88|Ostreid herpesvirus 1 (isolate France)

Query: 1 LKTSNAPAP 9
+ T+NAP+P
Sbjct: 670 IPTTNAPSP 678


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 TSNAPAPI 10
TSN P P+
Sbjct: 251 TSNPPVPV 258


>sp|YVFE_VACCC|UNCHARACTERIZED 7.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 LKTSNAP 7
+KTSNAP
Sbjct: 21 IKTSNAP 27


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 TSNAPAPI 10
TSN P P+
Sbjct: 247 TSNPPVPV 254




99|SequenceR|500|491|CRDLILKTSN

>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 CRDLILKTS 9
CR+L+LKTS
Sbjct: 776 CRNLLLKTS 784


>sp|Y011_SIFVH|UNCHARACTERIZED protein 11|Sulfolobus islandicus filamentous virus (isolate

Query: 2 RDLILKTSN 10
RD+ILK SN
Sbjct: 67 RDVILKNSN 75


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 2 RDLILKTS 9
RD+IL+TS
Sbjct: 1392 RDMILRTS 1399


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 2 RDLILKTS 9
RD+IL+TS
Sbjct: 1392 RDMILRTS 1399


>sp|VP5_MPRVN|PUTATIVE outer capsid protein VP5|Micromonas pusilla reovirus (isolate

Query: 2 RDLILKTS 9
+D+ILKTS
Sbjct: 310 KDIILKTS 317


>sp|VG43_ICHVA|UNCHARACTERIZED protein ORF43|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 RDLILKTS 9
RDL+LKT+
Sbjct: 281 RDLMLKTA 288


>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 CRDLILKT 8
CR L+LKT
Sbjct: 775 CRTLLLKT 782


>sp|YR886_MIMIV|PUTATIVE ankyrin repeat protein R886|Acanthamoeba polyphaga mimivirus

Query: 1 CRDLILKTSN 10
CR I+KT N
Sbjct: 77 CRASIIKTDN 86


>sp|NEP_I76A5|NUCLEAR export protein|Influenza A virus (strain

Query: 1 CRDLILKTSN 10
CR+++ KT N
Sbjct: 83 CRNILTKTEN 92


>sp|NEP_I79A3|NUCLEAR export protein|Influenza A virus (strain

Query: 1 CRDLILKTSN 10
CR+++ KT N
Sbjct: 83 CRNILTKTEN 92


>sp|NEP_I76A2|NUCLEAR export protein|Influenza A virus (strain A/Duck/Alberta/60/1976

Query: 1 CRDLILKTSN 10
CR+++ KT N
Sbjct: 83 CRNILTKTEN 92


>sp|NEP_I71A2|NUCLEAR export protein|Influenza A virus (strain A/Turkey/Oregon/1971

Query: 1 CRDLILKTSN 10
CR+++ KT N
Sbjct: 83 CRNILTKTEN 92


>sp|NEP_I63A1|NUCLEAR export protein|Influenza A virus (strain A/Turkey/Canada/1963

Query: 1 CRDLILKTSN 10
CR+++ KT N
Sbjct: 83 CRNILTKTEN 92


>sp|NEP_I49A1|NUCLEAR export protein|Influenza A virus (strain A/Duck/Germany/1949

Query: 1 CRDLILKTSN 10
CR+++ KT N
Sbjct: 83 CRNILTKTEN 92


>sp|NEP_I49A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Germany/n/1949

Query: 1 CRDLILKTSN 10
CR+++ KT N
Sbjct: 83 CRNILTKTEN 92


>sp|NEP_I96A0|NUCLEAR export protein|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 1 CRDLILKTSN 10
CR+++ KT N
Sbjct: 83 CRNILTKTEN 92


>sp|NEP_I89A7|NUCLEAR export protein|Influenza A virus (strain A/Equine/Jillin/1/1989

Query: 1 CRDLILKTSN 10
CR+++ KT N
Sbjct: 83 CRNILTKTEN 92


>sp|NEP_I80A6|NUCLEAR export protein|Influenza A virus (strain A/Duck/Hokkaido/8/1980

Query: 1 CRDLILKTSN 10
CR+++ KT N
Sbjct: 83 CRNILTKTEN 92


>sp|NEP_I79A2|NUCLEAR export protein|Influenza A virus (strain

Query: 1 CRDLILKTSN 10
CR+++ KT N
Sbjct: 83 CRNILTKTEN 92


>sp|NEP_I78A1|NUCLEAR export protein|Influenza A virus (strain

Query: 1 CRDLILKTSN 10
CR+++ KT N
Sbjct: 83 CRNILTKTEN 92


>sp|NEP_I72A6|NUCLEAR export protein|Influenza A virus (strain A/Tern/Turkmenia/18/1972

Query: 1 CRDLILKTSN 10
CR+++ KT N
Sbjct: 83 CRNILTKTEN 92


>sp|VSR_LSV|RNA silencing suppressor|Lily symptomless virus (LSV)

Query: 1 CRDLILKTSN 10
CRD++ +TS+
Sbjct: 52 CRDILRRTSS 61


>sp|HEMA_I76AH|HEMAGGLUTININ A virus (strain A/Duck/Memphis/546/1976

Query: 1 CRDLILKTS 9
C DLI KTS
Sbjct: 83 CDDLIGKTS 91




100|SequenceR|505|496|CIQYSCRDLI

>sp|RPB2_ASFWA|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate

Query: 1 CIQYSCRD 8
CI Y CR+
Sbjct: 1175 CISYVCRN 1182


>sp|RPB2_ASFP4|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate

Query: 1 CIQYSCRD 8
CI Y CR+
Sbjct: 1175 CISYVCRN 1182


>sp|POLG_BVY3|GENOME polyprotein|Blackberry virus Y (isolate Blackberry

Query: 3 QYSCRDLI 10
Q SC+DLI
Sbjct: 1268 QLSCKDLI 1275


>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)

Query: 1 CIQYSCRDL 9
C+ Y CR+L
Sbjct: 772 CLSYCCRNL 780


>sp|RPB2_ASFM2|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate

Query: 1 CIQYSCRD 8
CI Y CR+
Sbjct: 1175 CISYICRN 1182


>sp|RPB2_ASFK5|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate

Query: 1 CIQYSCRD 8
CI Y CR+
Sbjct: 1175 CISYICRN 1182


>sp|RPB2_ASFB7|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (strain

Query: 1 CIQYSCRD 8
CI Y CR+
Sbjct: 1175 CISYICRN 1182


>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)

Query: 1 CIQYSCRD 8
C++++C D
Sbjct: 396 CVKFTCED 403


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1 CIQYSCRD 8
C++++C D
Sbjct: 396 CVKFTCED 403


>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 CIQYSCRDL 9
C+Q +C DL
Sbjct: 127 CVQMNCVDL 135


>sp|36013_ASFP4|PROTEIN MGF 360-13L|African swine fever virus (isolate

Query: 1 CIQYSCRDLI 10
+QY C+D I
Sbjct: 187 AVQYECKDAI 196


>sp|POLG_RHDVS|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 CIQYSCR 7
C++Y C+
Sbjct: 778 CVEYQCK 784


>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 CIQYSCR 7
C++Y C+
Sbjct: 778 CVEYQCK 784


>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 CIQYSCR 7
C++Y C+
Sbjct: 778 CVEYQCK 784


>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 CIQYSCR 7
C++Y C+
Sbjct: 778 CVEYQCK 784


>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 CIQYSCR 7
C++Y C+
Sbjct: 778 CVEYQCK 784


>sp|36013_ASFWA|PROTEIN MGF 360-13L|African swine fever virus (isolate

Query: 1 CIQYSCRDLI 10
+QY C+D I
Sbjct: 187 AVQYECKDAI 196


>sp|RDRP_TBSVC|RNA-DIRECTED RNA polymerase|Tomato bushy stunt virus (strain

Query: 1 CIQYSCRDLI 10
C++Y RD+I
Sbjct: 256 CVRYVDRDVI 265


>sp|RDRP_CNV|RNA-DIRECTED RNA polymerase|Cucumber necrosis virus (CNV)

Query: 1 CIQYSCRDLI 10
C++Y RD+I
Sbjct: 256 CVRYVDRDVI 265


>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 4 YSCRDLI 10
Y CRD++
Sbjct: 936 YDCRDVV 942


>sp|RDRP_CRV|RNA-DIRECTED RNA polymerase|Cymbidium ringspot virus (CymRSV)

Query: 1 CIQYSCRDLI 10
C++Y RD+I
Sbjct: 256 CVRYVDRDVI 265


>sp|YL775_MIMIV|PUTATIVE PAN domain-containing protein L775|Acanthamoeba polyphaga mimivirus

Query: 1 CIQYSC 6
CIQY C
Sbjct: 165 CIQYDC 170




101|SequenceR|510|501|NNAIVCIQYS

>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1 NNAIVCIQY 9
+N ++C QY
Sbjct: 714 DNQVICTQY 722


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1 NNAIVCIQY 9
+N ++C QY
Sbjct: 714 DNQVICTQY 722


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 NNAIVCIQY 9
+N ++C QY
Sbjct: 714 DNQVICTQY 722


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 NNAIVCIQY 9
+N ++C QY
Sbjct: 714 DNQVICTQY 722


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 NNAIVCIQY 9
+N ++C QY
Sbjct: 714 DNQVICTQY 722


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 NNAIVCIQY 9
+N ++C QY
Sbjct: 714 DNQVICTQY 722


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 NNAIVCIQY 9
+N ++C QY
Sbjct: 714 DNQVICTQY 722


>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus

Query: 1 NNAIVCIQY 9
+N ++C QY
Sbjct: 703 DNQVICTQY 711


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 1 NNAIVCIQY 9
+N ++C QY
Sbjct: 703 DNQVICTQY 711


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1 NNAIVCIQY 9
+N ++C QY
Sbjct: 704 DNQVICTQY 712


>sp|DPOL_RSIV|DNA polymerase|Red sea bream iridovirus (RSIV)

Query: 1 NNAIVCIQ 8
NN +VC++
Sbjct: 24 NNTVVCVR 31


>sp|POL1_BBWVS|RNA1 polyprotein|Broad bean wilt virus 1

Query: 2 NAIVCIQYS 10
N+I+C YS
Sbjct: 1417 NSILCCDYS 1425


>sp|POL1_APMV|RNA1 polyprotein|Andean potato mottle virus (APMV)

Query: 2 NAIVCIQYS 10
N+I+C YS
Sbjct: 299 NSILCCDYS 307


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 NNAIVC 6
NNAIVC
Sbjct: 6298 NNAIVC 6303


>sp|POLG_PEV9U|GENOME polyprotein|Porcine enterovirus 9 (strain UKG/410/73)

Query: 1 NNAIVCIQYS 10
N A+VC+ S
Sbjct: 1622 NEAVVCVNTS 1631


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 NNAIVC 6
NNAIVC
Sbjct: 6389 NNAIVC 6394




102|SequenceR|515|506|SAGVSNNAIV

>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1 SAGVSNNAIV 10
+AGV NA+V
Sbjct: 2408 AAGVMKNAVV 2417


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1 SAGVSNNAIV 10
+AGV NA+V
Sbjct: 2406 AAGVMKNAVV 2415




103|SequenceR|520|511|IVSAPSAGVS

>sp|NS1_BMDNV|INITIATOR protein NS1|Bombyx mori densovirus (BmDNV) (Bombyx

Query: 1 IVSAPSAG 8
IVS PSAG
Sbjct: 72 IVSPPSAG 79


>sp|NS1_JDNVP|INITIATOR protein NS1|Junonia coenia densovirus (isolate pBRJ/1990)

Query: 1 IVSAPSAG 8
I+S PSAG
Sbjct: 405 IISPPSAG 412




104|SequenceR|525|516|DASIVIVSAP

***** No hits found ******


105|SequenceR|530|521|EKNEPDASIV

>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1 EKNEPDASIV 10
E+NE D SIV
Sbjct: 858 EENEVDISIV 867


>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)

Query: 1 EKNEPDASIV 10
E+NE D S+V
Sbjct: 858 EENEVDISVV 867


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 EKNEPDASIV 10
E+NE D S+V
Sbjct: 858 EENEVDISVV 867


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 EKNEPDASIV 10
E+NE D S+V
Sbjct: 858 EENEVDISVV 867


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1 EKNEPDASIV 10
E+NE D S+V
Sbjct: 858 EENEVDISVV 867


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1 EKNEPDASIV 10
E+NE D S+V
Sbjct: 858 EENEVDISVV 867


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1 EKNEPDASIV 10
E+NE D S+V
Sbjct: 858 EENEVDISVV 867


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 1 EKNEPDASIV 10
E+NE D S+V
Sbjct: 858 EENEVDISVV 867


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1 EKNEPDASIV 10
E+NE D S+V
Sbjct: 858 EENEVDISVV 867


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 1 EKNEPDASIV 10
E+NE D S+V
Sbjct: 858 EENEVDISVV 867


>sp|VP3_ARMVT|PROTEIN P3|Arabis mosaic virus large satellite

Query: 2 KNEPDAS 8
KN PDAS
Sbjct: 165 KNAPDAS 171




106|SequenceR|535|526|REEEVEKNEP

>sp|HUB10_BPP22|TAIL hub protein gp10|Salmonella phage P22 (Bacteriophage P22)

Query: 1 REEEVEKNEP 10
RE+ +E+NEP
Sbjct: 422 REQMIEQNEP 431


>sp|Y807_AFV1Y|PUTATIVE transmembrane protein ORF807|Acidianus filamentous virus 1 (isolate

Query: 2 EEEVEKNEP 10
+EE+ +NEP
Sbjct: 535 DEEIVQNEP 543




107|SequenceR|540|531|ETGAIREEEV

>sp|041R_FRG3G|UNCHARACTERIZED protein 041R|Frog virus 3 (isolate Goorha)

Query: 1 ETGAIRE 7
ETGAIRE
Sbjct: 846 ETGAIRE 852


>sp|CAP3_ADECR|PRE-HEXON-LINKING protein IIIa|Canine adenovirus serotype 1 (strain

Query: 1 ETGAIREEE 9
E GAIR +E
Sbjct: 93 ENGAIRRDE 101


>sp|CAP3_ADECC|PRE-HEXON-LINKING protein IIIa|Canine adenovirus serotype 1 (strain

Query: 1 ETGAIREEE 9
E GAIR +E
Sbjct: 93 ENGAIRRDE 101




108|SequenceR|545|536|LSFGGETGAI

>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 3 FGGETGAI 10
F GETG+I
Sbjct: 73 FAGETGSI 80


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 LSFGGET 7
L+FGGET
Sbjct: 2431 LAFGGET 2437


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank

Query: 1 LSFGGET 7
+S+GGET
Sbjct: 924 ISYGGET 930


>sp|YO23_BPHC1|PUTATIVE tail sheath protein|Haemophilus phage HP1 (strain HP1c1)

Query: 1 LSFGGETGAI 10
L FG ETG +
Sbjct: 176 LLFGNETGVL 185


>sp|POLG_RHDVS|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 3 FGGETGAI 10
FGG T AI
Sbjct: 1967 FGGSTSAI 1974


>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 3 FGGETGAI 10
FGG T AI
Sbjct: 1967 FGGSTSAI 1974


>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 3 FGGETGAI 10
FGG T AI
Sbjct: 1967 FGGSTSAI 1974


>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 3 FGGETGAI 10
FGG T AI
Sbjct: 1967 FGGSTSAI 1974


>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 3 FGGETGAI 10
FGG T AI
Sbjct: 1967 FGGSTSAI 1974


>sp|YR831_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R831|Acanthamoeba

Query: 1 LSFGGETGAI 10
+SFGG T +
Sbjct: 374 ISFGGSTSIV 383




109|SequenceR|550|541|QPKWSLSFGG

>sp|RDRP_SHVX|RNA replication protein|Shallot virus X (ShVX)

Query: 1 QPKWSLS 7
+PKWS+S
Sbjct: 431 EPKWSVS 437


>sp|GLYCO_SHRV|GLYCOPROTEIN rhabdovirus (SHRV)

Query: 3 KWSLSFGG 10
KWSLS GG
Sbjct: 388 KWSLSRGG 395


>sp|Y077_AFV1Y|UNCHARACTERIZED protein ORF77|Acidianus filamentous virus 1 (isolate

Query: 3 KWSLSFGG 10
KWS SFGG
Sbjct: 58 KWSNSFGG 65


>sp|SPIKE_WBV24|SPIKE glycoprotein|White bream virus (isolate Blicca

Query: 1 QPKWSLSFGG 10
QP W GG
Sbjct: 819 QPSWVYDLGG 828


>sp|MOVP_CLBVS|PUTATIVE movement protein|Citrus leaf blotch virus (isolate

Query: 2 PKWSL 6
PKWSL
Sbjct: 200 PKWSL 204


>sp|NCAP_AINOV|NUCLEOPROTEIN virus

Query: 1 QPKWSLSFGG 10
QP L+FGG
Sbjct: 59 QPSVDLTFGG 68


>sp|NCAP_SBVBH|NUCLEOPROTEIN Schmallenberg virus (isolate Bovine/BH80/Germany/2011)

Query: 1 QPKWSLSFGG 10
QP L+FGG
Sbjct: 59 QPSVDLTFGG 68


>sp|027R_FRG3G|UNCHARACTERIZED protein 027R|Frog virus 3 (isolate Goorha)

Query: 2 PKWSLSFG 9
P W+L FG
Sbjct: 881 PAWALPFG 888




110|SequenceR|555|546|IVDGPQPKWS

>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 IVDGPQPKWS 10
++D P P WS
Sbjct: 1844 LIDEPHPDWS 1853


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 IVDGPQPKWS 10
++D P P WS
Sbjct: 1844 LIDEPNPDWS 1853


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 IVDGPQPKWS 10
++D P P WS
Sbjct: 1844 LIDEPNPDWS 1853


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 IVDGPQPKWS 10
++D P P WS
Sbjct: 1844 LIDEPNPDWS 1853


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 IVDGPQPKWS 10
++D P P WS
Sbjct: 1844 LIDEPNPDWS 1853


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 2 VDGPQPKW 9
VD P P W
Sbjct: 1834 VDAPHPDW 1841


>sp|DNBI_EHV1V|MAJOR DNA-binding protein|Equine herpesvirus 1 (strain V592)

Query: 2 VDGPQPKW 9
+D P P+W
Sbjct: 841 IDTPNPQW 848


>sp|DNBI_EHV1B|MAJOR DNA-binding protein|Equine herpesvirus 1 (strain Ab4p)

Query: 2 VDGPQPKW 9
+D P P+W
Sbjct: 841 IDTPNPQW 848


>sp|GLYC_OLVVA|PRE-GLYCOPROTEIN polyprotein GP complex|Oliveros mammarenavirus (isolate

Query: 1 IVDGPQPK 8
I+DGP PK
Sbjct: 482 ILDGPCPK 489


>sp|DNBI_BHV2B|MAJOR DNA-binding protein|Bovine herpesvirus 2 (strain BMV)

Query: 3 DGPQPKW 9
D P P+W
Sbjct: 832 DNPNPQW 838


>sp|NSP_TGMVY|NUCLEAR shuttle protein|Tomato golden mosaic virus (strain

Query: 2 VDGPQPK 8
+DGP PK
Sbjct: 116 MDGPSPK 122


>sp|SHUT_SUHVK|VIRION host shutoff protein|Suid herpesvirus 1 (strain Kaplan)

Query: 5 PQPKWS 10
P+P+WS
Sbjct: 114 PRPRWS 119


>sp|L83L_ASFM2|PROTEIN L83L|African swine fever virus (isolate

Query: 1 IVDGPQPKWS 10
I +GP PK S
Sbjct: 66 IAEGPSPKKS 75


>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 VDGPQPK 8
+DGP PK
Sbjct: 69 IDGPLPK 75


>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 VDGPQPK 8
+DGP PK
Sbjct: 69 IDGPLPK 75


>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 VDGPQPK 8
+DGP PK
Sbjct: 69 IDGPLPK 75


>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 VDGPQPK 8
+DGP PK
Sbjct: 69 IDGPLPK 75


>sp|RDRP_I56A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 VDGPQPK 8
+DGP PK
Sbjct: 69 IDGPLPK 75


>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 VDGPQPK 8
+DGP PK
Sbjct: 69 IDGPLPK 75


>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 VDGPQPK 8
+DGP PK
Sbjct: 69 IDGPLPK 75


>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New

Query: 2 VDGPQPK 8
+DGP PK
Sbjct: 69 IDGPLPK 75


>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35

Query: 2 VDGPQPKW 9
VDG P+W
Sbjct: 318 VDGETPEW 325


>sp|DNBI_EHV1|MAJOR DNA-binding protein|Equine herpesvirus 1 (strain HVS25A)

Query: 2 VDGPQPKW 9
+D P P+W
Sbjct: 7 IDTPNPQW 14


>sp|RDRP_WCMVO|RNA replication protein|White clover mosaic virus (strain

Query: 1 IVDGPQP 7
+VD PQP
Sbjct: 402 VVDSPQP 408


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 IVDGPQPKWS 10
+V GP +WS
Sbjct: 4536 LVRGPTTQWS 4545


>sp|VE1_CRPVK|REPLICATION protein E1|Cottontail rabbit papillomavirus (strain Kansas)

Query: 4 GPQPKW 9
GP P+W
Sbjct: 287 GPMPEW 292


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1 IVDGPQPK 8
IVDGP+ K
Sbjct: 920 IVDGPESK 927


>sp|VF198_IIV6|UNCHARACTERIZED protein 198R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 IVDGPQPKWS 10
I GP P W+
Sbjct: 221 ISSGPVPTWT 230


>sp|NECK1_BPT4|NECK protein gp13|Enterobacteria phage T4 (Bacteriophage T4)

Query: 4 GPQPKWS 10
GPQ WS
Sbjct: 208 GPQDSWS 214


>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47

Query: 4 GPQPKW 9
GP P+W
Sbjct: 289 GPYPEW 294


>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40

Query: 2 VDGPQPK 8
VDGP PK
Sbjct: 436 VDGPLPK 442


>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1 IVDGPQPK 8
+VDGP+ K
Sbjct: 928 VVDGPETK 935


>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)

Query: 1 IVDGPQPK 8
+VDGP+ K
Sbjct: 856 VVDGPETK 863


>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1 IVDGPQPK 8
+VDGP+ K
Sbjct: 928 VVDGPETK 935


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1 IVDGPQPK 8
+VDGP+ K
Sbjct: 928 VVDGPETK 935


>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)

Query: 1 IVDGPQPK 8
+VDGP+ K
Sbjct: 928 VVDGPETK 935


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1 IVDGPQPK 8
+VDGP+ K
Sbjct: 923 VVDGPETK 930


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1 IVDGPQPK 8
+VDGP+ K
Sbjct: 928 VVDGPETK 935


>sp|VGA7_ALHV1|PUTATIVE C-type lectin protein A7|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 DGPQPKWS 10
DGP WS
Sbjct: 98 DGPYDSWS 105


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 1 IVDGPQPK 8
+VDGP+ K
Sbjct: 925 VVDGPETK 932


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1 IVDGPQPK 8
+VDGP+ K
Sbjct: 928 VVDGPETK 935


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1 IVDGPQPK 8
+VDGP+ K
Sbjct: 928 VVDGPETK 935




111|SequenceR|560|551|DVVYGIVDGP

>sp|RDRP_MPRVN|RNA-DIRECTED RNA polymerase VP2|Micromonas pusilla reovirus (isolate

Query: 1 DVVYGIVDGP 10
D YGI+D P
Sbjct: 1316 DATYGILDDP 1325


>sp|SPIKE_CVCBG|SPIKE glycoprotein|Canine coronavirus (strain BGF10) (CCoV)

Query: 1 DVVYGIVDGP 10
++ +G++DGP
Sbjct: 392 EIPFGVIDGP 401


>sp|MVP1_GLRV3|MOVEMENT protein Hsp70h|Grapevine leafroll-associated virus 3 (isolate

Query: 1 DVVYGIVDG 9
DVVYGI +G
Sbjct: 415 DVVYGIFEG 423


>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B

Query: 3 VYGIVDGP 10
+YG++D P
Sbjct: 305 IYGVIDTP 312


>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B

Query: 3 VYGIVDGP 10
+YG++D P
Sbjct: 305 IYGVIDTP 312


>sp|FUS_BRSVR|FUSION glycoprotein F0|Bovine respiratory syncytial virus (strain

Query: 3 VYGIVDGP 10
+YG++D P
Sbjct: 305 IYGVIDTP 312


>sp|FUS_BRSVC|FUSION glycoprotein F0|Bovine respiratory syncytial virus (strain

Query: 3 VYGIVDGP 10
+YG++D P
Sbjct: 305 IYGVIDTP 312


>sp|SPIKE_CVCAK|SPIKE glycoprotein|Canine coronavirus (strain K378) (CCoV)

Query: 1 DVVYGIVDGP 10
++ +G+ DGP
Sbjct: 392 EISFGVTDGP 401


>sp|SPIKE_FIPV|SPIKE glycoprotein|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 2 VVYGIVDGP 10
+ +GI DGP
Sbjct: 392 IPFGITDGP 400


>sp|RDRP_BPMS2|RNA-DIRECTED RNA polymerase beta chain|Escherichia phage MS2 (Bacteriophage MS2)

Query: 4 YGIVDG 9
YGIVDG
Sbjct: 290 YGIVDG 295


>sp|055R_FRG3G|UNCHARACTERIZED protein 055R|Frog virus 3 (isolate Goorha)

Query: 1 DVVYGIVDGP 10
VV+G+ DGP
Sbjct: 7 QVVHGVQDGP 16


>sp|SPIKE_CVPFS|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 DVVYGIVDGP 10
++ +G+ DGP
Sbjct: 388 EIPFGVTDGP 397


>sp|SPIKE_CVPPU|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 DVVYGIVDGP 10
++ +G+ DGP
Sbjct: 386 EIPFGVTDGP 395


>sp|SPIKE_CVPRT|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 DVVYGIVDGP 10
++ +G+ DGP
Sbjct: 386 EIPFGVTDGP 395


>sp|SPIKE_CVCAI|SPIKE glycoprotein|Canine coronavirus (strain Insavc-1) (CCoV)

Query: 1 DVVYGIVDGP 10
++ +G+ DGP
Sbjct: 392 EIPFGVTDGP 401


>sp|KITH_PSHV1|THYMIDINE kinase|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 VVYGIVDG 9
V+YGI+ G
Sbjct: 96 VIYGIISG 103


>sp|VF329_IIV6|UNCHARACTERIZED protein 329R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 DVVYGIVDGP 10
DVVY I D P
Sbjct: 178 DVVYHIEDKP 187


>sp|FUS_HRSVR|FUSION glycoprotein F0|Human respiratory syncytial virus A

Query: 3 VYGIVDGP 10
+YG++D P
Sbjct: 305 LYGVIDTP 312


>sp|FUS_HRSVA|FUSION glycoprotein F0|Human respiratory syncytial virus A

Query: 3 VYGIVDGP 10
+YG++D P
Sbjct: 305 LYGVIDTP 312


>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus

Query: 3 VYGIVDGP 10
+YG++D P
Sbjct: 305 LYGVIDTP 312


>sp|FUS_BRSVA|FUSION glycoprotein F0|Bovine respiratory syncytial virus (strain

Query: 3 VYGIVDGP 10
+YG++D P
Sbjct: 303 LYGVIDTP 310


>sp|SPIKE_CVPMI|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 4 YGIVDGP 10
+G+ DGP
Sbjct: 391 FGVTDGP 397


>sp|GP47_BPSP1|PUTATIVE gene 47 protein|Bacillus phage SP01 (Bacteriophage SP01)

Query: 1 DVVYGIVD 8
D VYGIVD
Sbjct: 36 DHVYGIVD 43




112|SequenceR|565|556|THDCWDVVYG

>sp|POL1_CPMVS|RNA1 polyprotein|Cowpea mosaic virus (strain SB)

Query: 1 THDCWDV 7
+H CWD+
Sbjct: 1036 SHSCWDL 1042


>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37

Query: 1 THDCWDVV 8
TH CWD +
Sbjct: 485 THVCWDYI 492


>sp|POL1_RCMV|RNA1 polyprotein|Red clover mottle virus (RCMV)

Query: 1 THDCWDV 7
+H CWD+
Sbjct: 1032 SHSCWDL 1038


>sp|YL702_MIMIV|UNCHARACTERIZED protein L702|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 HDCW 5
HDCW
Sbjct: 422 HDCW 425


>sp|RPB2_FRG3G|PUTATIVE DNA-directed RNA polymerase II|Frog virus 3 (isolate Goorha)

Query: 3 DCWDVV 8
DCWD V
Sbjct: 1077 DCWDSV 1082


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 2 HDCWDVVY 9
+CWD V+
Sbjct: 494 QECWDSVF 501


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2 HDCWDVVY 9
+CWD V+
Sbjct: 494 QECWDSVF 501


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 2 HDCWDVVY 9
+CWD V+
Sbjct: 494 QECWDSVF 501


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2 HDCWDVVY 9
+CWD V+
Sbjct: 494 QECWDSVF 501


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 3 DCWDVVY 9
+CWD V+
Sbjct: 495 ECWDSVF 501


>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 1 THDCW 5
TH+CW
Sbjct: 470 THNCW 474


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 1 THDCWDV 7
T+D WDV
Sbjct: 620 TYDVWDV 626


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 1 THDCWDV 7
T+D WDV
Sbjct: 617 TYDVWDV 623


>sp|E1BS_ADE41|E1B protein, small T-antigen|Human adenovirus F serotype 41

Query: 1 THDCWDVVYG 10
T CW ++G
Sbjct: 24 TSSCWRFIFG 33


>sp|VPRT_ASFM2|CYSTEINE protease S273R|African swine fever virus (isolate

Query: 3 DCWDVVY 9
DCW + Y
Sbjct: 179 DCWSIEY 185


>sp|VPRT_ASFK5|SUMO-1 cysteine protease S273R|African swine fever virus (isolate

Query: 3 DCWDVVY 9
DCW + Y
Sbjct: 179 DCWSIEY 185


>sp|SHUT_GAHVM|VIRION host shutoff protein|Gallid herpesvirus 2 (strain

Query: 3 DCWDVVYG 10
D W+V+YG
Sbjct: 35 DLWNVMYG 42


>sp|VPRT_ASFWA|SUMO-1 cysteine protease S273R|African swine fever virus (isolate

Query: 3 DCWDVVY 9
DCW + Y
Sbjct: 179 DCWSIEY 185


>sp|VPRT_ASFP4|SUMO-1 cysteine protease S273R|African swine fever virus (isolate

Query: 3 DCWDVVY 9
DCW + Y
Sbjct: 179 DCWSIEY 185


>sp|VPRT_ASFB7|CYSTEINE protease S273R|African swine fever virus (strain

Query: 3 DCWDVVY 9
DCW + Y
Sbjct: 179 DCWSIEY 185


>sp|VP10_MYRV9|UNCHARACTERIZED protein VP10|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 3 DCWD 6
DCWD
Sbjct: 47 DCWD 50


>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)

Query: 3 DCWD 6
DCWD
Sbjct: 215 DCWD 218


>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9

Query: 1 THDCWDVV 8
TH CW+ +
Sbjct: 481 THVCWEYI 488


>sp|POL1_BAYMY|GENOME polyprotein 1|Barley yellow mosaic virus (isolate

Query: 2 HDCWDVVYG 10
++CW +V G
Sbjct: 479 NNCWSMVVG 487


>sp|POL1_BAYMJ|GENOME polyprotein 1|Barley yellow mosaic virus (strain

Query: 2 HDCWDVVYG 10
++CW +V G
Sbjct: 479 NNCWSMVVG 487


>sp|POL1_BAYMG|GENOME polyprotein 1|Barley yellow mosaic virus (isolate

Query: 2 HDCWDVVYG 10
++CW +V G
Sbjct: 479 NNCWSMVVG 487


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 3 DCWDVVYG 10
DC +VYG
Sbjct: 2037 DCLPIVYG 2044


>sp|VE1_BPV2|REPLICATION protein E1|Bos taurus papillomavirus 2 (Bovine

Query: 1 THDCW 5
TH CW
Sbjct: 480 THACW 484


>sp|VE1_BPV1|REPLICATION protein E1|Bovine papillomavirus type 1

Query: 1 THDCW 5
TH CW
Sbjct: 481 THACW 485


>sp|POL_MLVFP|GAG-POL polyprotein|Friend murine leukemia virus (isolate

Query: 2 HDCWDVV 8
HDC D++
Sbjct: 1152 HDCLDIL 1158


>sp|POL_MLVFF|GAG-POL polyprotein|Friend murine leukemia virus (isolate

Query: 2 HDCWDVV 8
HDC D++
Sbjct: 1152 HDCLDIL 1158


>sp|POL_MLVF5|GAG-POL polyprotein|Friend murine leukemia virus (isolate

Query: 2 HDCWDVV 8
HDC D++
Sbjct: 1153 HDCLDIL 1159


>sp|POL_MLVCB|GAG-POL polyprotein|Cas-Br-E murine leukemia virus

Query: 2 HDCWDVV 8
HDC D++
Sbjct: 1150 HDCLDIL 1156


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 3 DCWDVVYG 10
DC +VYG
Sbjct: 2036 DCLPIVYG 2043


>sp|TEG6_GAHVM|TEGUMENT protein UL55 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 THDCWDVVY 9
+H+CW +
Sbjct: 140 SHECWKAAF 148


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 3 DCWDVVYG 10
DC +VYG
Sbjct: 2045 DCLPIVYG 2052


>sp|E41_ADES1|PROTEIN E4.1|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 THDCWDV 7
+HDCW +
Sbjct: 124 SHDCWSL 130


>sp|UBC4_MIMIV|PROBABLE bifunctional E2/E3 enzyme R795|Acanthamoeba polyphaga mimivirus

Query: 1 THDCWDVVY 9
T + WD++Y
Sbjct: 776 TDNIWDLIY 784


>sp|VE1_PCPV1|REPLICATION protein E1|Pygmy chimpanzee papillomavirus type 1

Query: 1 THDCW 5
TH CW
Sbjct: 525 THSCW 529


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 5 WDVVY 9
WDVVY
Sbjct: 2135 WDVVY 2139


>sp|VE1_PAPVE|REPLICATION protein E1|European elk papillomavirus (EEPV)

Query: 1 THDCW 5
TH CW
Sbjct: 486 THACW 490


>sp|RDRP_MRNV|RNA-DIRECTED RNA polymerase|Macrobrachium rosenbergii nodavirus (MrNV)

Query: 2 HDCWDV 7
HD WD+
Sbjct: 873 HDPWDI 878


>sp|Y12L_BPT4|UNCHARACTERIZED 14.1 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 THDCWD 6
TH CW+
Sbjct: 78 THPCWN 83


>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge

Query: 3 DCWD 6
DCWD
Sbjct: 411 DCWD 414


>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45

Query: 1 THDCW 5
TH CW
Sbjct: 518 THTCW 522


>sp|YL781_MIMIV|UNCHARACTERIZED protein L781|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 HDCWDVVY 9
H+C D++Y
Sbjct: 60 HECDDIIY 67


>sp|ENV_FENV1|ENVELOPE glycoprotein|Feline endogenous virus ECE1

Query: 1 THDCW 5
T DCW
Sbjct: 333 TQDCW 337


>sp|1101L_ASFP4|PROTEIN MGF 110-1L|African swine fever virus (isolate

Query: 2 HDCWDV 7
HDCW +
Sbjct: 223 HDCWTI 228


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 2 HDCWDVV 8
HD WD V
Sbjct: 1986 HDIWDWV 1992


>sp|1101L_ASFWA|PROTEIN MGF 110-1L|African swine fever virus (isolate

Query: 2 HDCWDV 7
HDCW +
Sbjct: 223 HDCWTI 228




113|SequenceR|570|561|GLVDQTHDCW

>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 2 LVDQTHDCW 10
L D TH+CW
Sbjct: 466 LDDATHNCW 474


>sp|DUT_HHV6Z|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6B (strain

Query: 4 DQTHDCW 10
D+THD W
Sbjct: 45 DKTHDVW 51


>sp|DUT_HHV6U|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain

Query: 4 DQTHDCW 10
D+THD W
Sbjct: 45 DKTHDVW 51


>sp|DUT_HHV6G|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain

Query: 4 DQTHDCW 10
D+THD W
Sbjct: 45 DKTHDVW 51


>sp|VE1_BPV1|REPLICATION protein E1|Bovine papillomavirus type 1

Query: 4 DQTHDCW 10
D TH CW
Sbjct: 479 DATHACW 485


>sp|VE1_PCPV1|REPLICATION protein E1|Pygmy chimpanzee papillomavirus type 1

Query: 2 LVDQTHDCW 10
L D TH CW
Sbjct: 521 LDDATHSCW 529


>sp|VE1_BPV2|REPLICATION protein E1|Bos taurus papillomavirus 2 (Bovine

Query: 4 DQTHDCW 10
D TH CW
Sbjct: 478 DATHACW 484


>sp|VE1_PAPVE|REPLICATION protein E1|European elk papillomavirus (EEPV)

Query: 4 DQTHDCW 10
D TH CW
Sbjct: 484 DATHACW 490


>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45

Query: 2 LVDQTHDCW 10
L D TH CW
Sbjct: 514 LDDATHTCW 522


>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 1 GLVDQTHDC 9
G DQ HDC
Sbjct: 1436 GRPDQLHDC 1444


Query: 2 LVDQTHDC 9
++++THDC
Sbjct: 522 ILEKTHDC 529


>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)

Query: 3 VDQTHDC 9
VD+T+DC
Sbjct: 747 VDETYDC 753


>sp|ENV_RSFFV|GLYCOPROTEIN 55|Rauscher spleen focus-forming virus (RSFFV)

Query: 4 DQTHDCW 10
D+T DCW
Sbjct: 302 DKTQDCW 308


>sp|GB_ALHV1|ENVELOPE glycoprotein B|Alcelaphine herpesvirus 1 (strain C500)

Query: 4 DQTHDCW 10
D+TH+C+
Sbjct: 547 DKTHECY 553


>sp|POLG_PYFV1|GENOME polyprotein|Parsnip yellow fleck virus (isolate

Query: 2 LVDQTHDC 9
L+D+TH C
Sbjct: 1443 LLDETHRC 1450


>sp|ENV_FENV1|ENVELOPE glycoprotein|Feline endogenous virus ECE1

Query: 4 DQTHDCW 10
+QT DCW
Sbjct: 331 NQTQDCW 337


>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 4 DQTHDCW 10
D+T +CW
Sbjct: 306 DKTQECW 312


>sp|VP48_NPVOP|P48 protein|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 2 LVDQTHDCW 10
L+D HDC+
Sbjct: 400 LLDLNHDCF 408


>sp|RFCS4_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GLVDQTHDC 9
G++D T DC
Sbjct: 274 GIIDDTIDC 282


>sp|ENV_FRSFB|GLYCOPROTEIN 42|Friend spleen focus-forming virus (strain

Query: 4 DQTHDCW 10
D+T +CW
Sbjct: 301 DKTQECW 307


>sp|VP35_NPVBM|EARLY 35 kDa protein|Bombyx mori nuclear polyhedrosis virus

Query: 2 LVDQTHDCW 10
LVD+ +DC+
Sbjct: 141 LVDKHNDCY 149


>sp|ENV_MLVFP|ENVELOPE glycoprotein|Friend murine leukemia virus (isolate

Query: 4 DQTHDCW 10
D+T +CW
Sbjct: 341 DKTQECW 347


>sp|ENV_MLVFF|ENVELOPE glycoprotein|Friend murine leukemia virus (isolate

Query: 4 DQTHDCW 10
D+T +CW
Sbjct: 341 DKTQECW 347


>sp|ENV_MLVMS|ENVELOPE glycoprotein|Moloney murine leukemia virus (isolate

Query: 4 DQTHDCW 10
D+T +CW
Sbjct: 331 DKTQECW 337


>sp|ENV_MLVHO|ENVELOPE glycoprotein|Hortulanus murine leukemia virus (HoMuLV)

Query: 4 DQTHDCW 10
D+T +CW
Sbjct: 329 DKTQECW 335


>sp|POLG_CILVC|RNA replication protein|Citrus leprosis virus C (isolate

Query: 3 VDQTHDC 9
+D+T+DC
Sbjct: 2075 IDRTYDC 2081


>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9

Query: 4 DQTHDCW 10
D TH CW
Sbjct: 479 DVTHVCW 485


>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37

Query: 4 DQTHDCW 10
D TH CW
Sbjct: 483 DVTHVCW 489


>sp|POLG_ASGVP|GENOME polyprotein|Apple stem grooving virus (strain

Query: 2 LVDQTHD 8
L+D+THD
Sbjct: 910 LLDKTHD 916


>sp|GAG_SIVTN|GAG polyprotein|Simian immunodeficiency virus (isolate TAN1)

Query: 1 GLVDQTHDCW 10
GL++ CW
Sbjct: 49 GLMENVEGCW 58


>sp|ENV_MLVRK|ENVELOPE glycoprotein|Radiation murine leukemia virus (strain

Query: 4 DQTHDCW 10
D+T +CW
Sbjct: 329 DRTQECW 335


>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 4 DQTHDCW 10
D+T +CW
Sbjct: 306 DKTQECW 312


>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 4 DQTHDCW 10
D+T +CW
Sbjct: 306 DKTQECW 312


>sp|ENV_MCFF|ENVELOPE glycoprotein|Mink cell focus-forming murine leukemia

Query: 4 DQTHDCW 10
D+T +CW
Sbjct: 302 DKTQECW 308


>sp|ENV_MCFF3|ENVELOPE glycoprotein|Mink cell focus-forming murine leukemia

Query: 4 DQTHDCW 10
D+T +CW
Sbjct: 302 DKTQECW 308


>sp|ENV_RMCFV|ENVELOPE glycoprotein|Rauscher mink cell focus-inducing virus

Query: 4 DQTHDCW 10
D+T +CW
Sbjct: 305 DKTQECW 311


>sp|ENV_FRSF5|GLYCOPROTEIN 55|Friend spleen focus-forming virus (isolate

Query: 4 DQTHDCW 10
D+T +CW
Sbjct: 301 DKTQECW 307


>sp|ENV_MLVF5|ENVELOPE glycoprotein|Friend murine leukemia virus (isolate

Query: 4 DQTHDCW 10
D+T +CW
Sbjct: 341 DKTQECW 347


>sp|POL_SIVTN|GAG-POL polyprotein|Simian immunodeficiency virus (isolate TAN1)

Query: 1 GLVDQTHDCW 10
GL++ CW
Sbjct: 49 GLMENVEGCW 58


>sp|ENV_MLVAV|ENVELOPE glycoprotein|AKV murine leukemia virus (AKR

Query: 4 DQTHDCW 10
D+T +CW
Sbjct: 332 DKTQECW 338


>sp|ENV_MLVRD|ENVELOPE glycoprotein|Radiation murine leukemia virus

Query: 4 DQTHDCW 10
D+T +CW
Sbjct: 329 DRTQECW 335


>sp|Y12L_BPT4|UNCHARACTERIZED 14.1 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 6 THDCW 10
TH CW
Sbjct: 78 THPCW 82




114|SequenceR|575|566|KWQFDGLVDQ

>sp|Y510_SIRV1|UNCHARACTERIZED protein 510|Sulfolobus islandicus rod-shaped virus 1

Query: 1 KWQFDGLVDQ 10
KW+F GL DQ
Sbjct: 452 KWKFYGLTDQ 461


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 1 KWQFDG 6
KW+FDG
Sbjct: 3909 KWEFDG 3914


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 KWQFDG 6
KW+FDG
Sbjct: 3920 KWEFDG 3925


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 1 KWQFDG 6
KW+FDG
Sbjct: 3909 KWEFDG 3914


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 KWQFDG 6
KW+FDG
Sbjct: 3920 KWEFDG 3925


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1 KWQFDGLVDQ 10
+WQ GL+D+
Sbjct: 2419 RWQRTGLIDE 2428


>sp|Y044_OSHVF|UNCHARACTERIZED protein ORF44|Ostreid herpesvirus 1 (isolate France)

Query: 3 QFDGLVDQ 10
Q+DGLVD+
Sbjct: 230 QYDGLVDE 237


>sp|DDA_BPT4|ATP-DEPENDENT DNA helicase dda|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 KWQFDGLVD 9
KW +D +VD
Sbjct: 194 KWNYDKVVD 202


>sp|VP4_APRVF|PUTATIVE non-structural protein 4|Aedes pseudoscutellaris reovirus (isolate

Query: 3 QFDGLVDQ 10
++DG++DQ
Sbjct: 703 RYDGIIDQ 710


>sp|VP4_AHSV|CORE protein VP4|African horse sickness virus (AHSV)

Query: 1 KWQFDGLVD 9
KW+ DG+ D
Sbjct: 24 KWELDGIKD 32


>sp|NEF_HV2D2|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 2 WQFDGLV 8
WQFD L+
Sbjct: 197 WQFDSLL 203


>sp|E1BS_ADECG|E1B protein, small T-antigen|Canine adenovirus serotype 1 (strain

Query: 1 KWQFDGLVD 9
+W+F GL D
Sbjct: 29 RWRFHGLAD 37


>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 1 KWQFDGLVD 9
KWQ GL++
Sbjct: 1270 KWQLCGLLE 1278


>sp|TOP2_IIV3|DNA topoisomerase 2|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 KWQFDGLVDQ 10
+W FD V+Q
Sbjct: 36 EWMFDDAVNQ 45


>sp|Y13E_BPT4|UNCHARACTERIZED 8.7 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 KWQFDGLVD 9
K FDGLV+
Sbjct: 60 KLDFDGLVE 68


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 1 KWQFDG 6
KW FDG
Sbjct: 2051 KWCFDG 2056


>sp|NEF_HV2EH|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 2 WQFDGLV 8
WQFD L+
Sbjct: 195 WQFDSLL 201


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 KWQFDG 6
KW FDG
Sbjct: 2049 KWCFDG 2054


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1 KWQFDG 6
KW FDG
Sbjct: 2064 KWCFDG 2069


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 1 KWQFDG 6
KW FDG
Sbjct: 2063 KWCFDG 2068


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1 KWQFDG 6
KW FDG
Sbjct: 2065 KWCFDG 2070


>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 1 KWQFDG 6
KW FDG
Sbjct: 2044 KWCFDG 2049


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1 KWQFDG 6
KW FDG
Sbjct: 2031 KWCFDG 2036


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1 KWQFDG 6
KW FDG
Sbjct: 2065 KWCFDG 2070


>sp|NEF_HV1M2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 KWQFD 5
KWQFD
Sbjct: 177 KWQFD 181


>sp|Y16C_BPT4|UNCHARACTERIZED 11.4 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 KWQFDGLVDQ 10
K+Q DG+++Q
Sbjct: 5 KFQIDGIMNQ 14


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1 KWQFDG 6
KW FDG
Sbjct: 2066 KWCFDG 2071


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 1 KWQFDG 6
KW FDG
Sbjct: 2066 KWCFDG 2071


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1 KWQFDG 6
KW FDG
Sbjct: 2066 KWCFDG 2071


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 KWQFDG 6
KW FDG
Sbjct: 2035 KWCFDG 2040


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 KWQFDG 6
KW FDG
Sbjct: 2035 KWCFDG 2040


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 KWQFDG 6
KW FDG
Sbjct: 2035 KWCFDG 2040


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 KWQFDG 6
KW FDG
Sbjct: 2035 KWCFDG 2040


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 KWQFDG 6
KW FDG
Sbjct: 2035 KWCFDG 2040


>sp|238R_IIV6|PUTATIVE MSV199 domain-containing protein 238R|Invertebrate iridescent virus

Query: 2 WQFDGLVDQ 10
W FD +DQ
Sbjct: 96 WFFDNYMDQ 104




115|SequenceR|580|571|NPGVNKWQFD

>sp|NRAM_I80A8|NEURAMINIDASE A virus (strain A/Turkey/Minnesota/833/1980

Query: 1 NPGVNKWQFD 10
NPGV W FD
Sbjct: 346 NPGVKGWAFD 355


>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968

Query: 1 NPGVNKWQFD 10
NPGV W FD
Sbjct: 346 NPGVKGWAFD 355


>sp|NRAM_I83A7|NEURAMINIDASE A virus (strain A/Chicken/Pennsylvania/8125/1983

Query: 1 NPGVNKWQFD 10
NPGV W FD
Sbjct: 328 NPGVKGWAFD 337


>sp|NRAM_I83A6|NEURAMINIDASE A virus (strain A/Chicken/Pennsylvania/1370/1983

Query: 1 NPGVNKWQFD 10
NPGV W FD
Sbjct: 326 NPGVKGWAFD 335


>sp|NRAM_I83A5|NEURAMINIDASE A virus (strain A/Chicken/Pennsylvania/1/1983

Query: 1 NPGVNKWQFD 10
NPGV W FD
Sbjct: 326 NPGVKGWAFD 335


>sp|NRAM_I66A1|NEURAMINIDASE A virus (strain A/Turkey/Wisconsin/1/1966

Query: 1 NPGVNKWQFD 10
NPGV W FD
Sbjct: 346 NPGVKGWAFD 355


>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957

Query: 1 NPGVNKWQFD 10
NPGV W FD
Sbjct: 346 NPGVKGWAFD 355


>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957

Query: 1 NPGVNKWQFD 10
NPGV W FD
Sbjct: 346 NPGVKGWAFD 355


>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann

Query: 1 NPGVNKWQFD 10
NPGV W FD
Sbjct: 346 NPGVKGWAFD 355


>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957

Query: 1 NPGVNKWQFD 10
NPGV W FD
Sbjct: 346 NPGVKGWAFD 355


>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957

Query: 1 NPGVNKWQFD 10
NPGV W FD
Sbjct: 346 NPGVKGWAFD 355


>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957

Query: 1 NPGVNKWQFD 10
NPGV W FD
Sbjct: 346 NPGVKGWAFD 355


>sp|SPIKE_BCHK9|SPIKE glycoprotein|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 NPGVNKW 7
NPG N+W
Sbjct: 171 NPGFNRW 177


>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 4 VNKWQFD 10
VNKW FD
Sbjct: 2875 VNKWMFD 2881


>sp|DPOL_PBCV1|DNA polymerase|Paramecium bursaria Chlorella virus 1

Query: 3 GVNKWQFD 10
G N WQ+D
Sbjct: 270 GYNTWQYD 277


>sp|POL2_BRSV|RNA2 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 2 PGVNKWQ 8
PG NKW+
Sbjct: 104 PGENKWE 110


>sp|SYR_MIMIV|ARGININE--TRNA ligase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 NPGVNKWQFD 10
NP +N ++FD
Sbjct: 458 NPRLNNYKFD 467


>sp|POL_CAEVC|POL polyprotein|Caprine arthritis encephalitis virus (strain

Query: 3 GVNKWQFD 10
GVN WQ D
Sbjct: 888 GVNHWQVD 895


>sp|Y067_OSHVF|UNCHARACTERIZED protein ORF67|Ostreid herpesvirus 1 (isolate France)

Query: 1 NPGVNKWQF 9
NP +KW+F
Sbjct: 555 NPEPSKWRF 563


>sp|VG59_ICHVA|PUTATIVE membrane protein ORF59|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 PGVNKWQF 9
PG+ KW +
Sbjct: 333 PGMRKWNY 340


>sp|VG48_SHV21|UNCHARACTERIZED gene 48 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 NPGVNKW 7
NPG+++W
Sbjct: 175 NPGMSEW 181


>sp|DPOL_PBCVN|DNA polymerase|Paramecium bursaria Chlorella virus NY2A

Query: 3 GVNKWQFD 10
G N WQ+D
Sbjct: 270 GYNLWQYD 277


>sp|BXC_CBCP|BOTULINUM neurotoxin type C|Clostridium botulinum C phage (Clostridium

Query: 2 PGVNKWQF 9
PG NKW F
Sbjct: 1002 PGYNKWFF 1009


>sp|YL279_MIMIV|PUTATIVE ankyrin repeat protein L279|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 NPGVNKW 7
NPG NK+
Sbjct: 145 NPGTNKY 151


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 1 NPGVNKW 7
NP VN W
Sbjct: 1101 NPTVNSW 1107


>sp|DPOL_NPVLD|DNA polymerase|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 2 PGVNKW 7
PG N+W
Sbjct: 538 PGFNRW 543


>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern

Query: 1 NPGVNKWQFD 10
N GV W FD
Sbjct: 346 NQGVKGWAFD 355


>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong

Query: 1 NPGVNKWQFD 10
N GV W FD
Sbjct: 346 NQGVKGWAFD 355


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 4 VNKWQF 9
VNKW F
Sbjct: 6754 VNKWDF 6759


>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968

Query: 1 NPGVNKWQFD 10
N GV W FD
Sbjct: 346 NQGVKGWAFD 355


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 4 VNKWQFD 10
V KW+FD
Sbjct: 3907 VVKWEFD 3913


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 4 VNKWQFD 10
V KW+FD
Sbjct: 3918 VVKWEFD 3924


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 4 VNKWQFD 10
VN+W FD
Sbjct: 2866 VNQWLFD 2872


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 4 VNKWQFD 10
V KW+FD
Sbjct: 3907 VVKWEFD 3913


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 4 VNKWQFD 10
V KW+FD
Sbjct: 3918 VVKWEFD 3924


>sp|VC13_SWPVK|PROTEIN C13|Swinepox virus (strain Kasza) (SWPV)

Query: 1 NPGVNKW 7
NP NKW
Sbjct: 464 NPHSNKW 470


>sp|YL107_MIMIV|PUTATIVE BTB/POZ domain-containing protein L107|Acanthamoeba polyphaga

Query: 4 VNKWQF 9
+NKW F
Sbjct: 454 INKWNF 459


>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)

Query: 3 GVNKWQF 9
G+NKW F
Sbjct: 146 GLNKWSF 152


>sp|VB10_VACCA|KELCH repeat protein B10|Vaccinia virus (strain Ankara) (VACV)

Query: 1 NPGVNKW 7
NP NKW
Sbjct: 103 NPRTNKW 109


>sp|NEF_HV1MV|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 6 KWQFD 10
KWQFD
Sbjct: 188 KWQFD 192


>sp|VB10_VACCT|KELCH repeat protein B10|Vaccinia virus (strain Tian Tan)

Query: 1 NPGVNKW 7
NP NKW
Sbjct: 103 NPRTNKW 109


>sp|VB10_VACCC|KELCH repeat protein B10|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 NPGVNKW 7
NP NKW
Sbjct: 103 NPRTNKW 109


>sp|VB10_RABPU|KELCH repeat protein B10|Rabbitpox virus (strain Utrecht) (RPV)

Query: 1 NPGVNKW 7
NP NKW
Sbjct: 103 NPRTNKW 109


>sp|B10_VACCW|KELCH repeat protein B10|Vaccinia virus (strain Western Reserve)

Query: 1 NPGVNKW 7
NP NKW
Sbjct: 103 NPRTNKW 109


>sp|MCP_POV01|MAJOR capsid protein|Pyramimonas orientalis virus (PoV01)

Query: 1 NPGVNKW 7
+PG+ KW
Sbjct: 82 SPGLTKW 88


>sp|NEF_HV1M2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 4 VNKWQFD 10
V KWQFD
Sbjct: 175 VLKWQFD 181


>sp|EV167_ASFWA|ENVELOPE protein 167|African swine fever virus (isolate

Query: 2 PGVNKWQFD 10
PG W++D
Sbjct: 133 PGCISWEYD 141




116|SequenceR|585|576|VTSTTNPGVN

>sp|YL288_MIMIV|PUTATIVE B-type lectin protein L288|Acanthamoeba polyphaga mimivirus

Query: 1 VTSTTNPGVN 10
+T+T+NPG N
Sbjct: 70 LTATSNPGAN 79


>sp|TMP_BPT4|TAPE measure protein|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 VTSTTNPGV 9
VTSTT PGV
Sbjct: 575 VTSTTAPGV 583




117|SequenceR|590|581|ADTSIVTSTT

***** No hits found ******


118|SequenceR|595|586|VGPRFADTSI

>sp|SPAN1_BP933|SPANIN, inner membrane subunit|Escherichia phage 933W (Bacteriophage 933W)

Query: 2 GPRFADTS 9
GPR ADT+
Sbjct: 117 GPRLADTA 124


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 1 VGPRFADTSI 10
VGP+ AD+ +
Sbjct: 1732 VGPKSADSDV 1741


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 VGPRFADTSI 10
VGP+ AD+ +
Sbjct: 1732 VGPKSADSDV 1741


>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 1 VGPRFADTS 9
VGP F +TS
Sbjct: 303 VGPNFWETS 311


>sp|CAPSH_ADEG1|HEXON protein|Fowl adenovirus A serotype 1

Query: 2 GPRFADTSI 10
GP F DT++
Sbjct: 777 GPNFLDTTL 785




119|SequenceR|600|591|RFDYRVGPRF

>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 3 DYRVGPRF 10
D+R GPR+
Sbjct: 2767 DHRKGPRY 2774


>sp|RDRP_BOTVF|RNA replication protein|Botrytis virus F (isolate Botrytis

Query: 1 RFDYRVG 7
RFDYR G
Sbjct: 576 RFDYRYG 582


>sp|Y066_NPVOP|UNCHARACTERIZED 98.6 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 RFDYRVG 7
R+DY VG
Sbjct: 73 RYDYNVG 79


>sp|NCAP_FIPV|NUCLEOPROTEIN coronavirus (strain FIPV WSU-79/1146)

Query: 1 RFDYRVGPRF 10
RFD ++ P+F
Sbjct: 140 RFDGKIPPQF 149


>sp|PYHD_CPVOP|POLYHEDRIN pseudotsugata cypovirus (OpCPV) (Orgyia

Query: 1 RFDYRVGPRF 10
RFD + PRF
Sbjct: 178 RFDDKYAPRF 187


>sp|PYHD_CPVES|POLYHEDRIN scandens cypovirus (EsCPV) (Euxoa

Query: 1 RFDYRVGPRF 10
RFD + PRF
Sbjct: 178 RFDDKYAPRF 187


>sp|G1P_BPPF1|PUTATIVE Gene 1 protein|Pseudomonas phage Pf1 (Bacteriophage Pf1)

Query: 1 RFDYRVGP 8
RFDY GP
Sbjct: 105 RFDYPGGP 112


>sp|SPIN_HAEPV|SPINDOLIN armigera entomopoxvirus (HaEPV)

Query: 2 FDYRVGP 8
FDY GP
Sbjct: 253 FDYAAGP 259




120|SequenceR|605|596|SLGYIRFDYR

>sp|COLL3_MIMIV|COLLAGEN-LIKE protein 3|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 SLGYIRFDY 9
SLGY+R D+
Sbjct: 927 SLGYVRIDF 935


>sp|FIB37_BPT2|LONG tail fiber protein Gp37|Enterobacteria phage T2 (Bacteriophage

Query: 1 SLGYIRFDYR 10
S GYI F+YR
Sbjct: 84 SGGYIEFNYR 93


>sp|P59_LIYV9|PROTEIN p59|Lettuce infectious yellows virus (isolate

Query: 2 LGYIRFDY 9
L Y+RFDY
Sbjct: 462 LNYMRFDY 469


>sp|COLL8_MIMIV|PUTATIVE collagenous domain-containing protein R238|Acanthamoeba polyphaga

Query: 3 GYIRFDY 9
GY+R DY
Sbjct: 432 GYVRIDY 438


>sp|RDRP_BOTVF|RNA replication protein|Botrytis virus F (isolate Botrytis

Query: 5 IRFDYR 10
+RFDYR
Sbjct: 575 LRFDYR 580


>sp|MATA_BPGA|MATURATION protein A|Enterobacteria phage GA (Bacteriophage GA)

Query: 3 GYIRFDYR 10
GYIR D+R
Sbjct: 48 GYIRRDFR 55


>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3

Query: 1 SLGYIRF 7
S GYIRF
Sbjct: 467 SAGYIRF 473


>sp|VP47_NPVAC|DNA-DIRECTED RNA polymerase subunit p47|Autographa californica nuclear

Query: 3 GYIRFDY 9
G++RFDY
Sbjct: 52 GFVRFDY 58


>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 LGYIRFD 8
LGY+RF+
Sbjct: 248 LGYVRFE 254


>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 LGYIRFD 8
LGY+RF+
Sbjct: 248 LGYVRFE 254




121|SequenceR|610|601|AIRKTSLGYI

>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 AIRKTSLGYI 10
AIRK SLG+I
Sbjct: 119 AIRKPSLGHI 128


>sp|DPO11_BPK64|DEPOLYMERASE, capsule K11-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 1 AIRKTSLGYI 10
I+KT++GYI
Sbjct: 26 GIKKTAVGYI 35


>sp|VIF_HV1ET|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 AIRKTSLGY 9
AIRK LGY
Sbjct: 119 AIRKAILGY 127


>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 AIRKTSLGYI 10
AIRK+ LG+I
Sbjct: 119 AIRKSILGHI 128


>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 AIRKTSLGY 9
AIRK LGY
Sbjct: 119 AIRKAILGY 127


>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 AIRKTSLGYI 10
AIRK LG+I
Sbjct: 119 AIRKALLGHI 128


>sp|VIF_HV1Z2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 AIRKTSLGYI 10
AIRK LG+I
Sbjct: 119 AIRKAILGHI 128


>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 AIRKTSLGYI 10
AIRK LG+I
Sbjct: 119 AIRKALLGHI 128


>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 AIRKTSLGYI 10
AIRK LG+I
Sbjct: 119 AIRKALLGHI 128


>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 AIRKTSLGYI 10
AIRK LG+I
Sbjct: 119 AIRKALLGHI 128


>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 AIRKTSLGYI 10
AIRK LG+I
Sbjct: 119 AIRKALLGHI 128


>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 AIRKTSLGYI 10
AIRK LG+I
Sbjct: 119 AIRKAILGHI 128


>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 AIRKTSLGYI 10
AIRK LG+I
Sbjct: 119 AIRKALLGHI 128


>sp|VIF_HV1LW|TRUNCATED virion infectivity factor|Human immunodeficiency virus type 1

Query: 1 AIRKTSLGYI 10
AIRK LG+I
Sbjct: 119 AIRKALLGHI 128


>sp|VIF_HV1Z6|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 AIRKTSLGYI 10
AIRK LG+I
Sbjct: 119 AIRKAILGHI 128




122|SequenceR|615|606|KELLCAIRKT

>sp|RDRP_TAV|RNA-DIRECTED RNA polymerase 2a|Tomato aspermy virus (TAV)

Query: 1 KELLCAIRK 9
+E+LCAI+K
Sbjct: 357 REVLCAIKK 365


>sp|MC160_MCV1|PROTEIN MC160|Molluscum contagiosum virus subtype 1

Query: 2 ELLCAIRK 9
ELLCA+R+
Sbjct: 60 ELLCALRR 67


>sp|RPB1_ASFWA|DNA-DIRECTED RNA polymerase RPB1 homolog|African swine fever virus (isolate

Query: 2 ELLCAIR 8
ELLC++R
Sbjct: 478 ELLCSVR 484


>sp|RPB1_ASFP4|DNA-DIRECTED RNA polymerase RPB1 homolog|African swine fever virus (isolate

Query: 2 ELLCAIR 8
ELLC++R
Sbjct: 478 ELLCSVR 484


>sp|RPB1_ASFM2|DNA-DIRECTED RNA polymerase RPB1 homolog|African swine fever virus (isolate

Query: 2 ELLCAIR 8
ELLC++R
Sbjct: 478 ELLCSVR 484


>sp|RPB1_ASFK5|DNA-DIRECTED RNA polymerase RPB1 homolog|African swine fever virus (isolate

Query: 2 ELLCAIR 8
ELLC++R
Sbjct: 478 ELLCSVR 484


>sp|RPB1_ASFB7|DNA-DIRECTED RNA polymerase RPB1 homolog|African swine fever virus (strain

Query: 2 ELLCAIR 8
ELLC++R
Sbjct: 478 ELLCSVR 484


>sp|CAPSD_AQRVA|INNER capsid protein VP3|Aquareovirus A (isolate Chum

Query: 3 LLCAIRKT 10
LLC +R+T
Sbjct: 816 LLCCVRQT 823


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 KELLCAIRKT 10
+ELLC+++ T
Sbjct: 405 EELLCSLKLT 414




123|SequenceR|620|611|SYGTKKELLC

>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 1 SYGTKKELLC 10
SYG ++++LC
Sbjct: 925 SYGGERKILC 934


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1 SYGTKKELLC 10
SYG ++++LC
Sbjct: 925 SYGGERKILC 934


>sp|RIR1_IIV6|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 YGTKKELL 9
YG KKELL
Sbjct: 415 YGDKKELL 422


>sp|YL754_MIMIV|UNCHARACTERIZED protein L754|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 GTKKELLC 10
GT+K+L+C
Sbjct: 199 GTRKDLIC 206


>sp|MATRX_SENDZ|MATRIX protein|Sendai virus (strain Z) (SeV)

Query: 2 YGTKKELL 9
YGT +ELL
Sbjct: 96 YGTDQELL 103


>sp|MATRX_SENDH|MATRIX protein|Sendai virus (strain Harris) (SeV)

Query: 2 YGTKKELL 9
YGT +ELL
Sbjct: 96 YGTDQELL 103


>sp|MATRX_SENDF|MATRIX protein|Sendai virus (strain Fushimi) (SeV)

Query: 2 YGTKKELL 9
YGT +ELL
Sbjct: 96 YGTDQELL 103


>sp|MATRX_SENDE|MATRIX protein|Sendai virus (strain Enders) (SeV)

Query: 2 YGTKKELL 9
YGT +ELL
Sbjct: 96 YGTDQELL 103


>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain

Query: 2 YGTKKELL 9
YGT +ELL
Sbjct: 96 YGTDQELL 103


>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains

Query: 2 YGTKKELL 9
YGT +ELL
Sbjct: 96 YGTDQELL 103


>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 2 YGTKKELLC 10
YGT +L+C
Sbjct: 2502 YGTWNQLMC 2510


>sp|YL573_MIMIV|UNCHARACTERIZED protein L573|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 SYGTKK 6
SYGTKK
Sbjct: 139 SYGTKK 144


>sp|Y058_OSHVF|UNCHARACTERIZED protein ORF58|Ostreid herpesvirus 1 (isolate France)

Query: 2 YGTKKELL 9
YG KKE L
Sbjct: 22 YGIKKEFL 29


>sp|NS3_LDCPR|NON-STRUCTURAL protein 3|Lymantria dispar cypovirus 1 (isolate

Query: 1 SYGTKKELLC 10
S+G KE LC
Sbjct: 110 SFGVVKEKLC 119


>sp|YL471_MIMIV|UNCHARACTERIZED protein L471|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 YGTKKELL 9
YGT+ EL+
Sbjct: 19 YGTRNELI 26


>sp|GP7_BPHK7|HEAD completion protein gp7|Enterobacteria phage HK97 (Bacteriophage

Query: 3 GTKKELLC 10
GT+ E+LC
Sbjct: 99 GTRLEILC 106


>sp|YL887_MIMIV|PUTATIVE JmjC domain-containing protein L887|Acanthamoeba polyphaga

Query: 2 YGTKKELLC 10
YG+ K ++C
Sbjct: 525 YGSNKNIVC 533


>sp|YR588_MIMIV|UNCHARACTERIZED protein R588|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 SYGTKKELLC 10
+YGT +++C
Sbjct: 178 AYGTSAQVVC 187


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SYGTKKELL 9
+YG KK++L
Sbjct: 1124 NYGKKKDIL 1132


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SYGTKKELL 9
+YG KK++L
Sbjct: 1124 NYGKKKDIL 1132


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SYGTKKELL 9
+YG KK++L
Sbjct: 1124 NYGKKKDIL 1132


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SYGTKKELL 9
+YG KK++L
Sbjct: 1124 NYGKKKDIL 1132


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SYGTKKELL 9
+YG KK++L
Sbjct: 1124 NYGNKKDVL 1132


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SYGTKKELL 9
+YG KK++L
Sbjct: 1124 NYGNKKDVL 1132




124|SequenceR|625|616|PALEQSYGTK

>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 1 PALEQSYG 8
P L QSYG
Sbjct: 2620 PVLTQSYG 2627


>sp|VP6B_BTV10|PROTEIN VP6-B|Bluetongue virus 10 (isolate USA)

Query: 2 ALEQSYGTK 10
A+E YGTK
Sbjct: 138 AIESKYGTK 146


>sp|VP6_BTV1S|HELICASE VP6-A|Bluetongue virus 1 (isolate South

Query: 2 ALEQSYGTK 10
A+E YGTK
Sbjct: 142 AIESKYGTK 150


>sp|VP6A_BTV10|HELICASE VP6-A|Bluetongue virus 10 (isolate USA)

Query: 2 ALEQSYGTK 10
A+E YGTK
Sbjct: 142 AIESKYGTK 150


>sp|VP6_BTV13|HELICASE VP6-A|Bluetongue virus 13 (isolate USA)

Query: 2 ALEQSYGTK 10
A+E YGTK
Sbjct: 138 AIESKYGTK 146


>sp|VP6_BTV11|HELICASE VP6-A|Bluetongue virus 11 (isolate USA)

Query: 2 ALEQSYGTK 10
A+E YGTK
Sbjct: 138 AIESKYGTK 146


>sp|VP6_BTV17|HELICASE VP6-A|Bluetongue virus 17 (isolate USA)

Query: 2 ALEQSYGTK 10
A+E YGTK
Sbjct: 138 AIESKYGTK 146


>sp|DUHM_BPW14|DEOXYURIDYLATE hydroxymethyltransferase|Delftia phage PhiW-14 (Deftia acidovorans

Query: 1 PALEQSYG 8
PA+E +YG
Sbjct: 145 PAIEAAYG 152




125|SequenceR|630|621|HPNDSPALEQ

>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate

Query: 2 PNDSPALEQ 10
PNDS ++EQ
Sbjct: 151 PNDSESIEQ 159


>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United

Query: 2 PNDSPALEQ 10
PNDS ++EQ
Sbjct: 151 PNDSESIEQ 159


>sp|RPOLV_BPN4|VIRION DNA-directed RNA polymerase|Enterobacteria phage N4 (Bacteriophage

Query: 2 PNDSPALE 9
P DSPA+E
Sbjct: 625 PKDSPAIE 632


>sp|PRO_ADEBA|PROTEASE adenovirus C serotype 10

Query: 1 HPNDSPALEQ 10
HP D+P ++Q
Sbjct: 138 HPFDNPTMDQ 147


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 1 HPNDSPALEQ 10
HPN P LE+
Sbjct: 1051 HPNVIPWLEE 1060


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 2 PNDSPALEQ 10
P D PAL Q
Sbjct: 957 PRDGPALSQ 965


>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain

Query: 2 PNDSPALEQ 10
P D PAL Q
Sbjct: 957 PRDGPALSQ 965


>sp|POL_IPMA|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 1 HPNDSPA 7
HPN SPA
Sbjct: 357 HPNVSPA 363


>sp|POL_IPMAI|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 1 HPNDSPA 7
HPN SPA
Sbjct: 276 HPNVSPA 282




126|SequenceR|635|626|TDVLVHPNDS

>sp|SPI2_MYXVU|SERINE proteinase inhibitor 2|Myxoma virus (strain Uriarra) (MYXV)

Query: 1 TDVLVHPN 8
TD+ HPN
Sbjct: 247 TDIFAHPN 254


>sp|SPI2_MYXVL|SERINE proteinase inhibitor 2|Myxoma virus (strain Lausanne) (MYXV)

Query: 1 TDVLVHPN 8
TD+ HPN
Sbjct: 247 TDIFAHPN 254


>sp|GLYCO_RYSV|GLYCOPROTEIN yellow stunt virus (RYSV)

Query: 1 TDVLVHPNDS 10
TD++VHP S
Sbjct: 84 TDIMVHPISS 93


>sp|YR514_MIMIV|UNCHARACTERIZED protein R514|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 TDVLVHPND 9
T+VL HPN+
Sbjct: 60 TNVLCHPNN 68


>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5

Query: 3 VLVHPNDS 10
V++HP+DS
Sbjct: 491 VIIHPHDS 498


>sp|YL323_MIMIV|UNCHARACTERIZED protein L323|Acanthamoeba polyphaga mimivirus (APMV)

Query: 6 HPNDS 10
HPNDS
Sbjct: 275 HPNDS 279




127|SequenceR|640|631|SHSTLTDVLV

>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 SHSTLTDV 8
SHSTLTD+
Sbjct: 80 SHSTLTDL 87


>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)

Query: 2 HSTLTDVL 9
HST++DVL
Sbjct: 185 HSTVSDVL 192


>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain

Query: 2 HSTLTDVL 9
HST++DVL
Sbjct: 190 HSTVSDVL 197




128|SequenceR|645|636|WSLTFSHSTL

>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)

Query: 1 WSLTFSHSTL 10
W L F H+ L
Sbjct: 1128 WELAFHHAIL 1137


>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)

Query: 1 WSLTFSHSTL 10
W L F H+ L
Sbjct: 1128 WELAFHHNIL 1137


>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain

Query: 1 WSLTFSH 7
W ++FSH
Sbjct: 1420 WRMSFSH 1426




129|SequenceR|650|641|TSYDKWSLTF

>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)

Query: 1 TSYDKWSLT 9
TS+DKW T
Sbjct: 230 TSHDKWQFT 238


>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)

Query: 1 TSYDKWSLT 9
TS+DKW T
Sbjct: 564 TSHDKWQFT 572


>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)

Query: 1 TSYDKWSLT 9
TS+DKW T
Sbjct: 564 TSHDKWXFT 572


>sp|DNBI_EHV2|MAJOR DNA-binding protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 SYDKWSL 8
SYDKW +
Sbjct: 309 SYDKWPI 315


>sp|YR314_MIMIV|UNCHARACTERIZED protein R314|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 TSYDKW 6
TSYD W
Sbjct: 66 TSYDLW 71


>sp|ABL_MLVAB|TYROSINE-PROTEIN kinase transforming protein Abl|Abelson murine leukemia virus

Query: 2 SYDKWSL 8
+YDKW +
Sbjct: 117 NYDKWEM 123


>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 TSYDKW 6
T+YD+W
Sbjct: 81 TTYDRW 86


>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 TSYDKW 6
T+YD+W
Sbjct: 81 TTYDRW 86


>sp|POL1_BBWVS|RNA1 polyprotein|Broad bean wilt virus 1

Query: 2 SYDKWSL 8
SYD+W++
Sbjct: 1149 SYDEWAV 1155




130|SequenceR|655|646|GPQSETSYDK

>sp|CAPSD_BPK21|MAJOR capsid protein|Pseudomonas phage KPP21

Query: 1 GPQSETSY 8
GPQ++T Y
Sbjct: 24 GPQTQTQY 31


>sp|POLG_SVV1|GENOME polyprotein|Seneca Valley virus (isolate -/United

Query: 1 GPQSETSYD 9
P+SE +YD
Sbjct: 1482 APRSENAYD 1490


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 1 GPQSETSYDK 10
GPQ + +YD+
Sbjct: 698 GPQFDPAYDQ 707


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 1 GPQSETSYDK 10
GPQ + +YD+
Sbjct: 698 GPQFDPAYDQ 707


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 1 GPQSETSYDK 10
GPQ + +YD+
Sbjct: 696 GPQFDPAYDQ 705


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 1 GPQSETSYDK 10
GPQ + +YD+
Sbjct: 698 GPQFDPAYDQ 707


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 1 GPQSETSYDK 10
GPQ + +YD+
Sbjct: 698 GPQFDPAYDQ 707


>sp|071R_FRG3G|UNCHARACTERIZED protein 071R|Frog virus 3 (isolate Goorha)

Query: 1 GPQSETSY 8
GPQ ++SY
Sbjct: 11 GPQGQSSY 18




131|SequenceR|660|651|YGQIFGPQSE

>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 YGQIFGP 7
YGQ FGP
Sbjct: 1590 YGQQFGP 1596


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 YGQIFGP 7
YGQ FGP
Sbjct: 1567 YGQQFGP 1573


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 YGQIFGP 7
YGQ FGP
Sbjct: 1561 YGQQFGP 1567


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 YGQIFGP 7
YGQ FGP
Sbjct: 1573 YGQQFGP 1579


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 YGQIFGP 7
YGQ FGP
Sbjct: 1590 YGQQFGP 1596


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 YGQIFGP 7
YGQ FGP
Sbjct: 1567 YGQQFGP 1573


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 YGQIFGP 7
YGQ FGP
Sbjct: 1561 YGQQFGP 1567


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 YGQIFGP 7
YGQ FGP
Sbjct: 1573 YGQQFGP 1579


>sp|VG67_ICHVA|UNCHARACTERIZED protein ORF67|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 YGQIFGP 7
Y Q+FGP
Sbjct: 783 YAQLFGP 789


>sp|YR22_TORVR|UNCHARACTERIZED protein in RNA2|Tomato ringspot virus (isolate raspberry)

Query: 1 YGQIFGPQSE 10
YG F P SE
Sbjct: 31 YGAAFAPASE 40


>sp|VP5_AQRVC|MICROTUBULE-ASSOCIATED protein VP5|Aquareovirus C (isolate Golden shiner/USA/GSRV/1977)

Query: 1 YGQIFGP 7
Y Q+FGP
Sbjct: 585 YKQLFGP 591


>sp|TERL_BPHK7|TERMINASE, large subunit|Enterobacteria phage HK97 (Bacteriophage HK97)

Query: 2 GQIFGPQSE 10
GQ+ GPQ +
Sbjct: 156 GQVRGPQDD 164


>sp|VP5_AQRVG|MICROTUBULE-ASSOCIATED protein VP5|Aquareovirus G (isolate American grass

Query: 1 YGQIFGP 7
Y Q+FGP
Sbjct: 585 YRQLFGP 591


>sp|RDRP_AQRVC|RNA-DIRECTED RNA polymerase VP2|Aquareovirus C (isolate Golden

Query: 1 YGQIFG 6
YGQ+FG
Sbjct: 769 YGQLFG 774




132|SequenceR|665|656|KLYVHYGQIF

>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 2 LYVHYGQ 8
+YVHYG+
Sbjct: 200 MYVHYGR 206


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 1 KLYVHYGQ 8
++Y+HYG+
Sbjct: 193 EIYIHYGR 200


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 2 LYVHYG 7
+YVHYG
Sbjct: 192 IYVHYG 197


>sp|MVP_AMVYS|MOVEMENT protein|Alfalfa mosaic virus (strain YSMV)

Query: 1 KLYVHYGQIF 10
+LYVH+ I+
Sbjct: 85 RLYVHHSAIY 94


>sp|VP1_MPRVN|UNCHARACTERIZED protein VP1|Micromonas pusilla reovirus (isolate Netherlands/2005)

Query: 1 KLYVHYGQIF 10
KLYVH G F
Sbjct: 811 KLYVHGGANF 820


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 YVHYGQI 9
YV YGQ+
Sbjct: 589 YVQYGQL 595


>sp|POLN_GFKVM|NON-STRUCTURAL replication polyprotein|Grapevine fleck virus (isolate Italy/MT48)

Query: 2 LYVHYGQ 8
LY+H GQ
Sbjct: 1660 LYIHAGQ 1666


>sp|MVP_AMVST|MOVEMENT protein|Alfalfa mosaic virus (strain Strasbourg)

Query: 1 KLYVHYGQIF 10
++YVH+ I+
Sbjct: 85 RMYVHHSAIY 94


>sp|MVP_AMVLE|MOVEMENT protein|Alfalfa mosaic virus (strain 425

Query: 1 KLYVHYGQIF 10
++YVH+ I+
Sbjct: 85 RMYVHHSAIY 94


>sp|MVP_AMV|MOVEMENT protein|Alfalfa mosaic virus (AMV)

Query: 1 KLYVHYGQIF 10
++YVH+ I+
Sbjct: 85 RMYVHHSAIY 94


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 3 YVHYGQI 9
YV YGQ+
Sbjct: 589 YVQYGQL 595


>sp|PRIM_BPP4|PUTATIVE P4-specific DNA primase|Enterobacteria phage P4 (Bacteriophage P4)

Query: 1 KLYVHYGQ 8
++Y HYG+
Sbjct: 338 RIYEHYGE 345


>sp|AN_NPVOP|ALKALINE nuclease|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 2 LYVHYGQI 9
LY+ YGQ+
Sbjct: 306 LYLSYGQL 313


>sp|MP_ASGVP|PROBABLE movement protein|Apple stem grooving virus (strain

Query: 3 YVHYGQIF 10
Y+HYG I
Sbjct: 85 YLHYGVIL 92


>sp|MP_ASGVK|PUTATIVE movement protein|Apple stem grooving virus (strain

Query: 3 YVHYGQIF 10
Y+HYG I
Sbjct: 85 YLHYGVIL 92


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 YVHYGQI 9
YV YGQ+
Sbjct: 588 YVQYGQL 594


>sp|YL100_MIMIV|PUTATIVE ankyrin repeat protein L100|Acanthamoeba polyphaga mimivirus

Query: 3 YVHYGQIF 10
Y+HYG +
Sbjct: 57 YLHYGDVL 64


>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)

Query: 5 HYGQIF 10
H+GQ+F
Sbjct: 2117 HFGQVF 2122


>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)

Query: 5 HYGQIF 10
H+GQ+F
Sbjct: 2117 HFGQVF 2122




133|SequenceR|670|661|QRAKSKLYVH

>sp|L_LATVB|RNA-DIRECTED RNA polymerase L|Latino mammarenavirus (isolate Rat/Bolivia/MARU

Query: 2 RAKSKLYVH 10
+ KSKLY+H
Sbjct: 2160 QTKSKLYIH 2168




134|SequenceR|675|666|FRPHCQRAKS

>sp|GLRX_MIMIV|PROBABLE glutaredoxin|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 PHCQRAKS 10
P+CQRA S
Sbjct: 29 PYCQRALS 36


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 PHCQR 7
PHCQR
Sbjct: 941 PHCQR 945


>sp|REP_TGMVY|REPLICATION-ASSOCIATED protein|Tomato golden mosaic virus (strain

Query: 1 FRPHCQRAKS 10
F P+ QRAKS
Sbjct: 88 FHPNIQRAKS 97


>sp|VU25_HHV6Z|PROTEIN U25|Human herpesvirus 6B (strain Z29)

Query: 1 FRPHCQRAK 9
R HCQR++
Sbjct: 286 LREHCQRSR 294


>sp|VU25_HHV6H|PROTEIN U25|Human herpesvirus 6B (HHV-6 variant

Query: 1 FRPHCQRAK 9
R HCQR++
Sbjct: 286 LREHCQRSR 294


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)

Query: 1 FRPHCQR 7
F PHCQ+
Sbjct: 192 FDPHCQK 198


>sp|VU25_HHV6U|PROTEIN U25|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 FRPHCQRAK 9
R HCQR++
Sbjct: 286 LREHCQRSR 294


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 1 FRPHCQR 7
F PHCQ+
Sbjct: 192 FDPHCQK 198


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 1 FRPHCQR 7
F PHCQ+
Sbjct: 192 FDPHCQK 198


>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African

Query: 3 PHCQRAKS 10
PHC+R ++
Sbjct: 805 PHCERVRT 812


>sp|VG071_BPPF3|7.9 kDa protein|Pseudomonas phage Pf3 (Bacteriophage Pf3)

Query: 2 RPHCQ 6
RPHCQ
Sbjct: 11 RPHCQ 15


>sp|AV2_CLVN|UNCHARACTERIZED 13.1 kDa protein|African cassava mosaic virus (isolate

Query: 3 PHCQRAKS 10
PHC R KS
Sbjct: 87 PHCPRHKS 94


>sp|AV2_CLVK|PROTEIN AV2|African cassava mosaic virus (isolate

Query: 3 PHCQRAKS 10
PHC R KS
Sbjct: 87 PHCPRHKS 94




135|SequenceR|680|671|LVAKEFRPHC

>sp|DPOL_ICHVA|DNA polymerase|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 LVAKEFRPH 9
L+ K+F+PH
Sbjct: 490 LIIKKFKPH 498


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 3 AKEFRPHC 10
+ EFRP C
Sbjct: 2029 SDEFRPKC 2036


>sp|US18_HCMVT|TRANSMEMBRANE protein HWLF5|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 5 EFRPH 9
EFRPH
Sbjct: 100 EFRPH 104


>sp|US18_HCMVM|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 EFRPH 9
EFRPH
Sbjct: 100 EFRPH 104


>sp|US18_HCMVA|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 EFRPH 9
EFRPH
Sbjct: 100 EFRPH 104


>sp|POL_SIVCZ|GAG-POL polyprotein|Simian immunodeficiency virus (isolate CPZ

Query: 1 LVAKEFRPHC 10
+VAKE HC
Sbjct: 1127 IVAKEIVAHC 1136


>sp|HMUDK_BPW14|5-HMDU DNA kinase|Delftia phage PhiW-14 (Deftia acidovorans

Query: 2 VAKEFRP 8
+AK+FRP
Sbjct: 166 IAKKFRP 172


>sp|YL356_MIMIV|UNCHARACTERIZED protein L356|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LVAKEFRPHC 10
L+ EF P+C
Sbjct: 402 LIELEFNPNC 411


>sp|CPM_GLRV3|MINOR capsid protein|Grapevine leafroll-associated virus 3 (isolate

Query: 2 VAKEFRPHC 10
V K F P+C
Sbjct: 423 VPKRFTPYC 431




136|SequenceR|685|676|ESGDSLVAKE

>sp|MCP_PSHV1|MAJOR capsid protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 GDSLVAKE 10
GDSLVA E
Sbjct: 389 GDSLVAVE 396




137|SequenceR|690|681|KYKCCESGDS

>sp|YR158_MIMIV|UNCHARACTERIZED protein R158|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KYKCCESGDS 10
KY CC GDS
Sbjct: 110 KYICCLGGDS 119


>sp|CEP1_SHV21|CYTOPLASMIC envelopment protein 1|Saimiriine herpesvirus 2 (strain 11)

Query: 2 YKCCESGD 9
YKC E GD
Sbjct: 186 YKCIEDGD 193


>sp|NCAP_ALLVP|NUCLEOPROTEIN mammarenavirus (isolate Rat/Peru/CLHP-2472/1997) (ALLV)

Query: 2 YKCCESGD 9
YK C SGD
Sbjct: 304 YKVCLSGD 311


>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)

Query: 2 YKCCESGD 9
YK C SGD
Sbjct: 304 YKICLSGD 311


>sp|NCAP_WWAVU|NUCLEOPROTEIN Arroyo mammarenavirus (isolate Rat/United

Query: 2 YKCCESGD 9
YK C SGD
Sbjct: 305 YKLCLSGD 312


>sp|NCAP_TACVF|NUCLEOPROTEIN virus (strain Franze-Fernandez) (TCRV)

Query: 2 YKCCESGD 9
YK C SGD
Sbjct: 303 YKLCLSGD 310


>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)

Query: 2 YKCCESGD 9
YK C SGD
Sbjct: 303 YKLCLSGD 310


>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 2 YKCCESGD 9
YK C SGD
Sbjct: 303 YKLCLSGD 310


>sp|NCAP_MOBVC|NUCLEOPROTEIN mammarenavirus (isolate Rat/Central African

Query: 2 YKCCESGD 9
YK C SGD
Sbjct: 307 YKICLSGD 314


>sp|G7_VACCC|ASSEMBLY protein G7|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 YKCCES 7
Y CCES
Sbjct: 56 YNCCES 61


>sp|NCAP_PIRVV|NUCLEOPROTEIN mammarenavirus (isolate Rat/Venezuela/VAV-488/1995) (PIRV)

Query: 2 YKCCESGD 9
YK C SGD
Sbjct: 303 YKLCLSGD 310


>sp|YR650_MIMIV|UNCHARACTERIZED protein R650|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 YKCCES 7
YKCC S
Sbjct: 309 YKCCNS 314


>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 2 YKCCESGD 9
YK C SGD
Sbjct: 308 YKICLSGD 315


>sp|G7_VARV|ASSEMBLY protein G7|Variola virus

Query: 2 YKCCES 7
Y CCES
Sbjct: 56 YNCCES 61


>sp|G7_VAR67|ASSEMBLY protein G7|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 YKCCES 7
Y CCES
Sbjct: 56 YNCCES 61


>sp|G7_VACCW|ASSEMBLY protein G7|Vaccinia virus (strain Western Reserve)

Query: 2 YKCCES 7
Y CCES
Sbjct: 56 YNCCES 61


>sp|G7_VACCA|ASSEMBLY protein G7|Vaccinia virus (strain Ankara) (VACV)

Query: 2 YKCCES 7
Y CCES
Sbjct: 56 YNCCES 61


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 KYKCCE 6
KY CCE
Sbjct: 4570 KYGCCE 4575


>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)

Query: 2 YKCCESGD 9
YK C SGD
Sbjct: 308 YKICLSGD 315


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 KYKCCE 6
KY CCE
Sbjct: 4577 KYGCCE 4582


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 2 YKCCE 6
Y+CCE
Sbjct: 2671 YQCCE 2675


>sp|RDRP_TMOB|REPLICASE large subunit|Tobamovirus Ob

Query: 2 YKCCES 7
++CCES
Sbjct: 183 FQCCES 188


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 3 KCCESGD 9
+CC+ GD
Sbjct: 1781 ECCQCGD 1787


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 YKCCESG 8
Y CC SG
Sbjct: 5086 YVCCSSG 5092


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 3 KCCESGD 9
+CC+ GD
Sbjct: 1781 ECCQCGD 1787


>sp|YL264_MIMIV|UNCHARACTERIZED WD repeat-containing protein L264|Acanthamoeba polyphaga mimivirus

Query: 1 KYKCCESGDS 10
K KCCE D+
Sbjct: 436 KTKCCEKDDT 445




138|SequenceR|695|686|EPNDIKYKCC

>sp|P28_VACCW|TRUNCATED p28 protein|Vaccinia virus (strain Western Reserve)

Query: 1 EPNDIKYKCC 10
EPNDI+ C
Sbjct: 24 EPNDIRLTVC 33


>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 3 NDIKYKCC 10
N+ KY CC
Sbjct: 583 NNYKYPCC 590


>sp|MVP_PVMA|P3N-PIPO polyprotein|Potato virus A (PVA)

Query: 3 NDIKYKCC 10
N+ KY CC
Sbjct: 583 NNYKYPCC 590


>sp|PG021_CWPXB|HOST range factor p28|Cowpox virus (strain Brighton Red)

Query: 1 EPNDIKYKCC 10
EPNDI+ C
Sbjct: 24 EPNDIRLTVC 33


>sp|PG021_VACC8|HOST range factor p28|Vaccinia virus (strain LC16m8) (VACV)

Query: 1 EPNDIKYKCC 10
EPNDI+ C
Sbjct: 24 EPNDIRLTVC 33


>sp|PG021_VACC0|HOST range factor p28|Vaccinia virus (strain LC16m0) (VACV)

Query: 1 EPNDIKYKCC 10
EPNDI+ C
Sbjct: 24 EPNDIRLTVC 33


>sp|PG021_CWPXG|HOST range factor p28|Cowpox virus (strain GRI-90 /

Query: 1 EPNDIKYKCC 10
EPNDI+ C
Sbjct: 24 EPNDIRLTVC 33


>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)

Query: 1 EPNDIKYKCC 10
EPNDI+ C
Sbjct: 24 EPNDIRLTVC 33


>sp|PG021_MONPV|HOST range factor p28|Monkeypox virus (MPXV)

Query: 1 EPNDIKYKCC 10
EPNDI+ C
Sbjct: 24 EPNDIRLTVC 33


>sp|PG021_VAR67|HOST range factor p28|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 EPNDIKYKCC 10
EPNDI+ C
Sbjct: 24 EPNDIRLTVC 33


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 2 PNDIKYKCC 10
PND + CC
Sbjct: 1026 PNDTESWCC 1034


>sp|PG021_ECTVM|HOST range factor p28|Ectromelia virus (strain Moscow) (ECTV)

Query: 1 EPNDIKYKCC 10
EPNDI+ C
Sbjct: 24 EPNDIRLPVC 33


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 3 NDIKYKC 9
NDI Y+C
Sbjct: 165 NDITYEC 171


>sp|VF155_IIV3|UNCHARACTERIZED protein 113L|Invertebrate iridescent virus 3 (IIV-3)

Query: 4 DIKYKCC 10
DI+YK C
Sbjct: 598 DIRYKSC 604


>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus

Query: 2 PNDIKYKCC 10
PN+IKYK
Sbjct: 535 PNEIKYKIL 543


>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate Human/India/Ind3/1967)

Query: 2 PNDIKYKCC 10
PN+IKYK
Sbjct: 535 PNEIKYKIL 543


>sp|RYK_AVIR3|TYROSINE-PROTEIN kinase transforming protein RYK|Avian retrovirus RPL30

Query: 1 EPNDIKYKCC 10
+P DI CC
Sbjct: 360 DPGDIAEPCC 369


>sp|PG189_VACCW|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Western Reserve)

Query: 2 PNDIKYKCC 10
PN+IKYK
Sbjct: 535 PNEIKYKIL 543


>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 PNDIKYKCC 10
PN+IKYK
Sbjct: 535 PNEIKYKIL 543


>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)

Query: 2 PNDIKYKCC 10
PN+IKYK
Sbjct: 538 PNEIKYKIL 546


>sp|REN_TYLCI|REPLICATION enhancer protein|Tomato yellow leaf curl virus

Query: 1 EPNDIKYK 8
E +DIKYK
Sbjct: 125 ETHDIKYK 132


>sp|REN_BGYMV|REPLICATION enhancer protein|Bean golden yellow mosaic virus

Query: 1 EPNDIKYK 8
E +DIKYK
Sbjct: 123 ENHDIKYK 130


>sp|REN_BGYMJ|REPLICATION enhancer protein|Bean golden yellow mosaic virus

Query: 1 EPNDIKYK 8
E +DIKYK
Sbjct: 123 ENHDIKYK 130


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3 NDIKYKCC 10
+DI KCC
Sbjct: 6383 SDITLKCC 6390




139|SequenceR|700|691|ILAKEEPNDI

>sp|MVP_SHMV|MOVEMENT protein|Sunn-hemp mosaic virus (SHMV) (TMV

Query: 4 KEEPNDI 10
K+EPND+
Sbjct: 213 KKEPNDV 219


>sp|LEF3_NPVOP|LATE expression factor 3|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 4 KEEPND 9
KE+PND
Sbjct: 311 KEDPND 316


>sp|REP9_FBNC9|PARA-REP C9|Faba bean necrotic yellows C9

Query: 2 LAKEEPND 9
L +EEPND
Sbjct: 157 LLEEEPND 164




140|SequenceR|705|696|KLNDVILAKE

>sp|MCE_RGDV|PUTATIVE mRNA-capping enzyme P5|Rice gall dwarf virus (RGDV)

Query: 2 LNDVILAKE 10
LND +LAKE
Sbjct: 42 LNDAVLAKE 50


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 KLNDVILAKE 10
+LND +LAK+
Sbjct: 546 QLNDPVLAKK 555


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3 NDVILAKE 10
ND++LAK+
Sbjct: 3896 NDILLAKD 3903


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3 NDVILAKE 10
ND++LAK+
Sbjct: 3873 NDILLAKD 3880


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 3 NDVILAKE 10
ND++LAK+
Sbjct: 3871 NDILLAKD 3878


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 3 NDVILAKE 10
ND++LAK+
Sbjct: 3867 NDILLAKD 3874


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 3 NDVILAKE 10
ND++LAK+
Sbjct: 3879 NDILLAKD 3886


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 NDVILAKE 10
ND++LAK+
Sbjct: 3896 NDILLAKD 3903


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 NDVILAKE 10
ND++LAK+
Sbjct: 3873 NDILLAKD 3880


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 3 NDVILAKE 10
ND++LAK+
Sbjct: 3871 NDILLAKD 3878


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 3 NDVILAKE 10
ND++LAK+
Sbjct: 3867 NDILLAKD 3874


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 3 NDVILAKE 10
ND++LAK+
Sbjct: 3879 NDILLAKD 3886




141|SequenceR|710|701|YFSEPKLNDV

>sp|POLN_CRPVC|REPLICASE polyprotein|Cricket paralysis virus (isolate

Query: 1 YFSEPKLNDV 10
YFS+P +DV
Sbjct: 1020 YFSQPNCDDV 1029


>sp|RIR1_ASFWA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|African swine fever virus (isolate

Query: 1 YFSEPKLNDV 10
YF EP+L+ V
Sbjct: 721 YFYEPELSQV 730


>sp|RIR1_ASFM2|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|African swine fever virus (isolate

Query: 1 YFSEPKLNDV 10
YF EP+L+ V
Sbjct: 722 YFYEPELSQV 731


>sp|RIR1_ASFP4|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|African swine fever virus (isolate

Query: 1 YFSEPKLNDV 10
YF EP+L+ V
Sbjct: 721 YFYEPELSQV 730


>sp|RIR1_ASFB7|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|African swine fever virus (strain

Query: 1 YFSEPKLNDV 10
YF EP+L+ V
Sbjct: 721 YFYEPELSQV 730


>sp|RIR1_ASFK5|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|African swine fever virus (isolate

Query: 1 YFSEPKLNDV 10
YF EP+L+ V
Sbjct: 722 YFYEPELSQV 731


>sp|YR838_MIMIV|PUTATIVE ankyrin repeat protein R838|Acanthamoeba polyphaga mimivirus

Query: 1 YFSEPK 6
YFSEPK
Sbjct: 58 YFSEPK 63


>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)

Query: 2 FSEPKLNDV 10
F EP +ND+
Sbjct: 91 FYEPPMNDI 99


>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 FSEPKLNDV 10
F EP +ND+
Sbjct: 91 FYEPPMNDI 99


>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)

Query: 2 FSEPKLNDV 10
F EP +ND+
Sbjct: 91 FYEPPMNDI 99


>sp|L_PARVP|RNA-DIRECTED RNA polymerase L|Parana mammarenavirus (isolate

Query: 2 FSEPKLNDV 10
FS+PK+ DV
Sbjct: 1682 FSKPKIPDV 1690


>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)

Query: 1 YFSEPKLNDV 10
YF +P ND+
Sbjct: 275 YFEQPVSNDL 284


>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)

Query: 1 YFSEPKLNDV 10
YF +P ND+
Sbjct: 275 YFEQPVSNDL 284




142|SequenceR|715|706|TIFFEYFSEP

>sp|V130_FOWPN|PROTEIN FPV130|Fowlpox virus (strain NVSL) (FPV)

Query: 1 TIFFEYFSE 9
TI+FEYF
Sbjct: 84 TIYFEYFKN 92


>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33

Query: 2 IFFEYFSE 9
++F+YF E
Sbjct: 166 VYFKYFKE 173


>sp|VF391_IIV6|UNCHARACTERIZED protein 391R|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 FFEYFSEP 10
F +YF EP
Sbjct: 63 FLKYFDEP 70




143|SequenceR|720|711|ASTFPTIFFE

>sp|ENV_FLVC6|ENVELOPE glycoprotein|Feline leukemia virus (isolate CFE-6)

Query: 3 TFPTIFFE 10
TFPTI+F+
Sbjct: 69 TFPTIYFD 76


>sp|VH22_MYXVL|PROBABLE host range protein 2-2|Myxoma virus (strain Lausanne) (MYXV)

Query: 2 STFPTIF 8
ST+PTI+
Sbjct: 135 STYPTIY 141


>sp|ENV_FLVC1|ENVELOPE glycoprotein|Feline leukemia virus (isolate CFE-16)

Query: 4 FPTIFFE 10
FPT++F+
Sbjct: 70 FPTLYFD 76


>sp|RIR1_EHV4|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Equine herpesvirus 4 (strain 1942)

Query: 1 ASTFPTI 7
AST+PT+
Sbjct: 498 ASTYPTV 504




144|SequenceR|725|716|SPGEGASTFP

>sp|TIPJ_BPS27|TIP attachment protein J|Escherichia phage SECphi27

Query: 1 SPGEGASTF 9
+PGEGA+ F
Sbjct: 1159 TPGEGATKF 1167


>sp|REP2_MVDC2|PARA-REP C2|Milk vetch dwarf C2 alphasatellite

Query: 3 GEGASTF 9
GEG STF
Sbjct: 178 GEGKSTF 184


>sp|REP1_FBN11|PARA-REP C1|Faba bean necrotic yellows C11

Query: 3 GEGASTF 9
GEG STF
Sbjct: 178 GEGKSTF 184


>sp|REP3_MVDC3|PARA-REP C3|Milk vetch dwarf C3 alphasatellite

Query: 3 GEGASTF 9
GEG STF
Sbjct: 178 GEGKSTF 184


>sp|REP_TGMVY|REPLICATION-ASSOCIATED protein|Tomato golden mosaic virus (strain

Query: 1 SPGEGAS 7
+PGEGAS
Sbjct: 308 NPGEGAS 314


>sp|VG65_ICHVA|UNCHARACTERIZED protein ORF65|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 SPGEGAS 7
SPGEGA+
Sbjct: 1123 SPGEGAA 1129




145|SequenceR|730|721|KTFTASPGEG

>sp|PRIM_MUHVS|DNA primase|Murid herpesvirus 1 (strain Smith)

Query: 1 KTFTASPG 8
K FTA PG
Sbjct: 193 KCFTADPG 200


>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 1 KTFTASPGE 9
+TFTA+P E
Sbjct: 2461 RTFTAAPIE 2469


>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 1 KTFTASPGE 9
+TFTA+P E
Sbjct: 2429 RTFTAAPIE 2437


>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 TFTASPGE 9
TFTA PG+
Sbjct: 423 TFTADPGD 430


>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 TFTASPGE 9
TFTA PG+
Sbjct: 423 TFTADPGD 430


>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 TFTASPGE 9
TFTA PG+
Sbjct: 423 TFTADPGD 430


>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)

Query: 1 KTFTASPGEG 10
KT+TA G+G
Sbjct: 59 KTYTALEGQG 68


>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann

Query: 1 KTFTASPGEG 10
KT+TA G+G
Sbjct: 59 KTYTALEGQG 68


>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann

Query: 1 KTFTASPGEG 10
KT+TA G+G
Sbjct: 59 KTYTALEGQG 68


>sp|E1B55_ADECT|E1B 55 kDa protein|Canine adenovirus serotype 2 (strain

Query: 1 KTFTASPGE 9
KT+ A PG+
Sbjct: 101 KTYKAKPGD 109


>sp|E1B55_ADECR|E1B 55 kDa protein|Canine adenovirus serotype 1 (strain

Query: 1 KTFTASPGE 9
KT+ A PG+
Sbjct: 101 KTYRAKPGD 109


>sp|E1B55_ADECC|E1B 55 kDa protein|Canine adenovirus serotype 1 (strain

Query: 1 KTFTASPGE 9
KT+ A PG+
Sbjct: 101 KTYRAKPGD 109


>sp|SOC_BPR69|SMALL outer capsid protein|Escherichia phage RB69 (Bacteriophage RB69)

Query: 1 KTFTASPGEG 10
KTFT GEG
Sbjct: 8 KTFTHPAGEG 17




146|SequenceR|735|726|DPTTVKTFTA

>sp|L_GOGV|RNA-DIRECTED RNA polymerase L|Alethinophid 1 reptarenavirus (isolate

Query: 1 DPTTVKTFTA 10
DP+T K+F +
Sbjct: 816 DPSTAKSFKS 825




147|SequenceR|740|731|MSSHEDPTTV

>sp|VP7_BRD|CORE protein VP7|Broadhaven virus (BRD)

Query: 3 SHEDPTT 9
SH DPTT
Sbjct: 23 SHRDPTT 29


>sp|GLYCO_NCMV|GLYCOPROTEIN cereal mosaic virus (NCMV)

Query: 3 SHEDPTTV 10
S EDPT++
Sbjct: 58 SQEDPTSI 65


>sp|CAPSD_AQRVC|INNER capsid protein VP3|Aquareovirus C (isolate Golden

Query: 2 SSHEDPTTV 10
S H+DPT +
Sbjct: 408 SMHQDPTQI 416




148|SequenceR|745|736|LIHILMSSHE

>sp|VP4_MPRVN|UNCHARACTERIZED protein VP4|Micromonas pusilla reovirus (isolate Netherlands/2005)

Query: 2 IHILMSSHE 10
+H+L+S HE
Sbjct: 561 LHMLLSQHE 569


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 HILMSSH 9
H+L+SSH
Sbjct: 1007 HVLLSSH 1013


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 HILMSSH 9
H+L+SSH
Sbjct: 1007 HVLLSSH 1013


>sp|CAPSD_PAVPN|CAPSID protein VP1|Porcine parvovirus (strain NADL-2) (PPV)

Query: 1 LIHILMSSHE 10
LIH+ M HE
Sbjct: 219 LIHLNMPEHE 228


>sp|CAPSD_PAVPK|CAPSID protein VP1|Porcine parvovirus (strain Kresse) (PPV)

Query: 1 LIHILMSSHE 10
LIH+ M HE
Sbjct: 219 LIHLNMPEHE 228


>sp|CAPSD_PAVP9|CAPSID protein VP1|Porcine parvovirus (strain 90HS) (PPV)

Query: 1 LIHILMSSHE 10
LIH+ M HE
Sbjct: 219 LIHLNMPEHE 228


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 2 IHILMSSH 9
+H+++SSH
Sbjct: 5320 VHVVISSH 5327


>sp|TGB1_WCMVM|MOVEMENT and silencing protein TGBp1|White clover mosaic virus (strain

Query: 2 IHILMSSH 9
IH+L+S+H
Sbjct: 4 IHLLLSAH 11




149|SequenceR|750|741|FVMPLLIHIL

***** No hits found ******


150|SequenceR|755|746|ILLVCFVMPL

>sp|YR528_MIMIV|PUTATIVE 5'-3' exonuclease R528|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 ILLVCFVMPL 10
++L+C +MP+
Sbjct: 110 VILLCMLMPV 119


>sp|BP29_BPHC1|PUTATIVE baseplate protein gp29|Haemophilus phage HP1 (strain HP1c1)

Query: 3 LVCFVMP 9
L+C+ MP
Sbjct: 284 LICYAMP 290


>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P

Query: 1 ILLVCF 6
ILLVCF
Sbjct: 14 ILLVCF 19


>sp|U91_HHV6U|UNCHARACTERIZED protein U91|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 ILLVCFVM 8
ILLVC +M
Sbjct: 105 ILLVCIIM 112


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 ILLVCFVMPL 10
I L CFVM L
Sbjct: 3425 ISLCCFVMGL 3434


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 ILLVCFVMPL 10
I L CFVM L
Sbjct: 3425 ISLCCFVMGL 3434




151|SequenceR|760|751|YCMVMILLVC

>sp|U91_HHV6Z|PROTEIN U91|Human herpesvirus 6B (strain Z29)

Query: 1 YCMVMILLVC 10
+C++MI + C
Sbjct: 109 FCIMMIFITC 118


>sp|VE1_PCPVC|REPLICATION protein E1|Pygmy chimpanzee papillomavirus type 1C

Query: 2 CMVMILLV 9
CM M+LLV
Sbjct: 270 CMGMVLLV 277


>sp|VEF_GVTN|VIRAL-ENHANCING factor|Trichoplusia ni granulosis virus (TnGV)

Query: 1 YCMVMILLVC 10
YC + + LVC
Sbjct: 140 YCFLYLDLVC 149


>sp|VEF_GVPU|VIRAL-ENHANCING factor|Pseudalatia unipuncta granulosis virus (PuGV)

Query: 1 YCMVMILLVC 10
YC + + LVC
Sbjct: 140 YCFLYLDLVC 149


>sp|VEF_GVHA|VIRAL-ENHANCING factor|Heliothis armigera granulosis virus (HaGV)

Query: 1 YCMVMILLVC 10
YC + + LVC
Sbjct: 140 YCFLYLDLVC 149




152|SequenceR|765|756|WQSKLYCMVM

>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 1 WQSKLYCMVM 10
W+ ++YC+ M
Sbjct: 672 WEDQIYCLDM 681


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 1 WQSKLYCMVM 10
W+ ++YC+ M
Sbjct: 673 WEDQIYCLDM 682


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 1 WQSKLYCMVM 10
W+ ++YC+ M
Sbjct: 672 WEDQIYCLDM 681


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 1 WQSKLYCMVM 10
W+ ++YC+ M
Sbjct: 672 WEDQIYCLDM 681


>sp|L_EBLV2|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 2 (strain

Query: 1 WQSKLYCMVM 10
W+ ++YC+ M
Sbjct: 672 WEDQIYCLDM 681


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 1 WQSKLYCMVM 10
W+ ++YC+ M
Sbjct: 673 WEDQIYCLDM 682


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 1 WQSKLYCMVM 10
W+ ++YC+ M
Sbjct: 672 WEDQIYCLDM 681


>sp|POL_SFVCP|PRO-POL polyprotein|Simian foamy virus (isolate chimpanzee)

Query: 1 WQSKLYC 7
WQ K YC
Sbjct: 274 WQGKQYC 280


>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1

Query: 1 WQSKLYC 7
WQ K YC
Sbjct: 274 WQGKQYC 280


>sp|L_MOKV|LARGE structural protein|Mokola virus (MOKV)

Query: 1 WQSKLYCMVM 10
W+ ++YC+ M
Sbjct: 672 WKDQIYCLDM 681


>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1 WQSKLYC 7
WQ K YC
Sbjct: 274 WQGKQYC 280


>sp|POL_FFV|PRO-POL polyprotein|Feline foamy virus (FFV) (Feline

Query: 1 WQSKLYC 7
WQ K YC
Sbjct: 271 WQGKQYC 277


>sp|L_EBLV1|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 1 (strain

Query: 1 WQSKLYCMVM 10
W+ ++YC+ M
Sbjct: 672 WRDQIYCLDM 681


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 1 WQSKLYCM 8
W+ ++YC+
Sbjct: 672 WEDQIYCL 679


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 1 WQSKLYCM 8
W+ ++YC+
Sbjct: 672 WEDQIYCL 679


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 1 WQSKLYCM 8
WQ+K+Y +
Sbjct: 822 WQAKVYSL 829


>sp|DPOL_IIV6|DNA polymerase 037L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 WQSKLY 6
WQSK Y
Sbjct: 363 WQSKAY 368


>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1 WQSKLYC 7
W KL+C
Sbjct: 573 WDKKLWC 579


>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)

Query: 1 WQSKLYC 7
W KL+C
Sbjct: 573 WDQKLWC 579


>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)

Query: 1 WQSKLYC 7
W KL+C
Sbjct: 573 WDQKLWC 579


>sp|YL273_MIMIV|PUTATIVE ankyrin repeat protein L273|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WQSKLYCM 8
W S++YC+
Sbjct: 246 WVSEVYCV 253


>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)

Query: 1 WQSKLYC 7
W KL+C
Sbjct: 573 WDQKLWC 579


>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)

Query: 1 WQSKLYC 7
W KL+C
Sbjct: 573 WDQKLWC 579


>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1 WQSKLYC 7
W KL+C
Sbjct: 573 WDQKLWC 579




153|SequenceR|770|761|CTEKIWQSKL

>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1

Query: 1 CTEKIWQS 8
C E++WQ+
Sbjct: 283 CEERVWQT 290


>sp|POLG_PPVEA|GENOME polyprotein|Plum pox potyvirus (strain El

Query: 3 EKIWQS 8
EKIWQ+
Sbjct: 48 EKIWQT 53




154|SequenceR|775|766|PIDPYCTEKI

>sp|NS1_MPV15|NON-STRUCTURAL protein 1|Murine pneumonia virus (strain 15)

Query: 1 PIDPYC 6
PIDP C
Sbjct: 99 PIDPTC 104


>sp|US03_GAHVM|PROTEIN kinase US3 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 IDPYCTE 8
+DPYCT+
Sbjct: 269 LDPYCTK 275


>sp|US03_GAHVG|SERINE/THREONINE-PROTEIN kinase US3 homolog|Gallid herpesvirus 2 (strain GA)

Query: 2 IDPYCTE 8
+DPYCT+
Sbjct: 269 LDPYCTK 275


>sp|VE7_HPV42|PROTEIN E7|Human papillomavirus 42

Query: 1 PIDPYCTEKI 10
PID YC E++
Sbjct: 22 PIDLYCYEQL 31


>sp|NCAP_MSTV|NUCLEOPROTEIN stripe virus (MStV)

Query: 4 PYCTEK 9
PYCT K
Sbjct: 175 PYCTTK 180


>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 1 PIDPYCTEKI 10
PIDP EKI
Sbjct: 2519 PIDPEEVEKI 2528


>sp|YR635_MIMIV|UNCHARACTERIZED protein R635|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 IDPYCTEKI 10
I PYC+EK+
Sbjct: 156 ICPYCSEKM 164


>sp|POL1_BBWV2|RNA1 polyprotein|Broad bean wilt virus 2

Query: 1 PIDPYCTEKI 10
P+D C E+I
Sbjct: 122 PVDEDCVEEI 131


>sp|POL1_SDVS5|RNA1 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 1 PIDPYCT 7
P DPY T
Sbjct: 1475 PYDPYAT 1481


>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 PIDPYC 6
PIDP C
Sbjct: 382 PIDPTC 387


>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)

Query: 1 PIDPYC 6
PIDP C
Sbjct: 382 PIDPTC 387




155|SequenceR|780|771|SKYPDPIDPY

>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 3 YPDPIDP 9
Y DPIDP
Sbjct: 797 YEDPIDP 803


>sp|COLL7_MIMIV|COLLAGEN-LIKE protein 7|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 PDPIDP 9
PDP DP
Sbjct: 1185 PDPFDP 1190


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 3 YPDPIDP 9
Y DPIDP
Sbjct: 8 YDDPIDP 14


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 3 YPDPIDP 9
Y DPIDP
Sbjct: 8 YDDPIDP 14


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 3 YPDPIDP 9
Y DPIDP
Sbjct: 8 YDDPIDP 14


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1 SKYPDPID 8
S YPDP D
Sbjct: 265 SDYPDPSD 272


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1 SKYPDPID 8
S YPDP D
Sbjct: 265 SDYPDPSD 272


>sp|CAPSD_PVMR|CAPSID protein|Potato virus M (strain Russian)

Query: 4 PDPIDPY 10
PDP +PY
Sbjct: 94 PDPTNPY 100


>sp|CAPSD_PVMG|CAPSID protein|Potato virus M (strain German)

Query: 4 PDPIDPY 10
PDP +PY
Sbjct: 94 PDPTNPY 100


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 SKYPDPID 8
+KYP P+D
Sbjct: 828 NKYPLPLD 835


>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 2 KYPDPIDP 9
K P PIDP
Sbjct: 2515 KPPKPIDP 2522


>sp|VP4_MYRV9|UNCHARACTERIZED protein VP4|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 3 YPDPIDPY 10
Y DPID Y
Sbjct: 159 YGDPIDSY 166


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 SKYPDPID 8
+KYP P+D
Sbjct: 828 NKYPLPLD 835


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 3 YPDPIDP 9
Y DPIDP
Sbjct: 8 YDDPIDP 14


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 3 YPDPIDP 9
Y DPIDP
Sbjct: 8 YDDPIDP 14


>sp|L_MOKV|LARGE structural protein|Mokola virus (MOKV)

Query: 3 YPDPIDP 9
Y DPIDP
Sbjct: 8 YDDPIDP 14


>sp|PG099_VARV|ENTRY-FUSION complex protein OPG094|Variola virus

Query: 2 KYPDPID 8
K PDPID
Sbjct: 60 KIPDPID 66


>sp|PG099_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate

Query: 2 KYPDPID 8
K PDPID
Sbjct: 60 KIPDPID 66


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 3 YPDPIDP 9
Y DPIDP
Sbjct: 8 YDDPIDP 14


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 3 YPDPIDP 9
Y DPIDP
Sbjct: 8 YDDPIDP 14


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 3 YPDPIDP 9
Y DPIDP
Sbjct: 8 YDDPIDP 14


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 3 YPDPIDP 9
Y DPIDP
Sbjct: 8 YDDPIDP 14


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 3 YPDPIDP 9
Y DPIDP
Sbjct: 8 YDDPIDP 14


>sp|VINT_BPHK0|INTEGRASE phage HK022 (Bacteriophage HK022)

Query: 1 SKYPDPIDP 9
SK+ DP+ P
Sbjct: 274 SKHHDPLSP 282


>sp|H962R_ASFB7|PUTATIVE primase C962R|African swine fever virus (strain

Query: 4 PDPIDPY 10
PDP +PY
Sbjct: 766 PDPGNPY 772


>sp|PG099_VACCW|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Western Reserve)

Query: 2 KYPDPID 8
K PDPID
Sbjct: 60 KIPDPID 66


>sp|PG099_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 KYPDPID 8
K PDPID
Sbjct: 60 KIPDPID 66


>sp|PG099_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)

Query: 2 KYPDPID 8
K PDPID
Sbjct: 60 KIPDPID 66


>sp|PG099_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)

Query: 2 KYPDPID 8
K PDPID
Sbjct: 60 KIPDPID 66


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 1 SKYPDPI 7
SKYP P+
Sbjct: 1969 SKYPRPV 1975




156|SequenceR|785|776|LSLISSKYPD

>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)

Query: 3 LISSKYPD 10
ISSK+PD
Sbjct: 112 FISSKFPD 119




157|SequenceR|790|781|EKFKILSLIS

>sp|NCAP_BRSVR|NUCLEOPROTEIN respiratory syncytial virus (strain

Query: 2 KFKILSLIS 10
KF++L+L+S
Sbjct: 110 KFEVLTLVS 118


>sp|NCAP_BRSV3|NUCLEOPROTEIN respiratory syncytial virus (strain

Query: 2 KFKILSLIS 10
KF++L+L+S
Sbjct: 110 KFEVLTLVS 118


>sp|NCAP_BRSVA|NUCLEOPROTEIN respiratory syncytial virus (strain

Query: 2 KFKILSLIS 10
KF++L+L+S
Sbjct: 110 KFEVLTLVS 118


>sp|NCAP_ORSVW|NUCLEOPROTEIN respiratory syncytial virus (strain

Query: 2 KFKILSLIS 10
KF++L+L+S
Sbjct: 110 KFEVLTLVS 118




158|SequenceR|795|786|ILHPNEKFKI

>sp|DPOL_ALHV1|DNA polymerase catalytic subunit|Alcelaphine herpesvirus 1 (strain

Query: 3 HPNEKFKI 10
HPN KF++
Sbjct: 761 HPNPKFRV 768


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 1 ILHPNEKFK 9
+LHPN+++K
Sbjct: 6714 VLHPNDEWK 6722


>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain

Query: 2 LHPNEKF 8
LHPN+K+
Sbjct: 181 LHPNDKW 187


>sp|REGB_BPT4|ENDORIBONUCLEASE RegB|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 ILHPNEKFK 9
+ PNEKFK
Sbjct: 117 VCKPNEKFK 125


>sp|PTPH_MIMIV|PUTATIVE tyrosine-protein phosphatase R622|Acanthamoeba polyphaga mimivirus

Query: 1 ILHPNEKFKI 10
I++PN+ FK+
Sbjct: 171 IVNPNDSFKL 180


>sp|FIBER_BPSPP|TAIL spike protein|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 3 HPNEKFKI 10
HPN K+ I
Sbjct: 57 HPNSKYVI 64


>sp|VP2_EHDV1|OUTER capsid protein VP2|Epizootic hemorrhagic disease virus 1

Query: 1 ILHPNEKF 8
I+HPN+ F
Sbjct: 875 IVHPNKGF 882


>sp|VG55_BPMD2|GENE 55 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 3 HPNEKFK 9
HP E FK
Sbjct: 23 HPRENFK 29


>sp|UBC_ASFM2|UBIQUITIN-CONJUGATING enzyme E2|African swine fever virus (isolate

Query: 1 ILHPNEKFKI 10
I++P+E FKI
Sbjct: 14 IVNPSEHFKI 23


>sp|VG48_SHV21|UNCHARACTERIZED gene 48 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 2 LHPNEK 7
LHPN+K
Sbjct: 241 LHPNDK 246




159|SequenceR|800|791|SVNMIILHPN

***** No hits found ******


160|SequenceR|805|796|DPICDSVNMI

>sp|RDRP_CMVIX|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Ixora)

Query: 2 PICDSVNMI 10
PIC++ NMI
Sbjct: 195 PICEACNMI 203


>sp|Y054_OSHVF|UNCHARACTERIZED protein ORF54|Ostreid herpesvirus 1 (isolate France)

Query: 2 PICDSVN 8
PICDS+N
Sbjct: 80 PICDSIN 86


>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P

Query: 2 PICDSVNM 9
P+CDSV M
Sbjct: 635 PLCDSVIM 642


>sp|MATRX_RINDR|MATRIX protein|Rinderpest virus (strain RBOK) (RDV)

Query: 3 ICDSVNMI 10
+C++VNMI
Sbjct: 140 VCNAVNMI 147


>sp|Y112_NPVAC|UNCHARACTERIZED 10.5 kDa protein in|Autographa californica nuclear polyhedrosis

Query: 2 PICDSVNMI 10
P+C ++N+I
Sbjct: 55 PVCKNINLI 63


>sp|ADOM_BPT3|S-ADENOSYLMETHIONINE lyase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 3 ICDSVNM 9
+CD VNM
Sbjct: 22 LCDEVNM 28


>sp|HMUDK_BPPM6|5-HMDU DNA kinase|Pseudomonas phage M6

Query: 1 DPICDSVNMI 10
DP+C +N+I
Sbjct: 24 DPLCRVINVI 33


>sp|YR748_MIMIV|PUTATIVE ankyrin repeat protein R748|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DPICDS 6
DP+CDS
Sbjct: 529 DPVCDS 534


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 PICDSVNMI 10
P C +NM+
Sbjct: 3271 PTCKEINMV 3279


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 PICDSVNMI 10
P C +NM+
Sbjct: 3271 PTCKEINMV 3279


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 PICDSVNMI 10
P C +NM+
Sbjct: 3270 PTCKEINMV 3278


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 PICDSVNMI 10
P C +NM+
Sbjct: 3241 PTCKEINMV 3249


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 PICDSVNMI 10
P C +NM+
Sbjct: 3147 PTCKDINMV 3155


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 PICDSVNMI 10
P C +NM+
Sbjct: 3164 PTCKDINMV 3172


>sp|MATRX_RINDK|MATRIX protein|Rinderpest virus (strain Kabete O)

Query: 3 ICDSVNMI 10
+C++VN+I
Sbjct: 140 VCETVNLI 147


>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)

Query: 1 DPICDSVNMI 10
+PICD V+++
Sbjct: 55 EPICDPVDVL 64




161|SequenceR|810|801|VVEIADPICD

>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1 VVEIADPIC 9
+ EI DP+C
Sbjct: 256 IAEIEDPVC 264


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1 VVEIADPIC 9
+ EI DP+C
Sbjct: 256 IAEIEDPVC 264


>sp|RDRP_MRNV|RNA-DIRECTED RNA polymerase|Macrobrachium rosenbergii nodavirus (MrNV)

Query: 3 EIADPICD 10
EIAD +CD
Sbjct: 580 EIADKVCD 587


>sp|POL_BIV29|GAG-POL polyprotein|Bovine immunodeficiency virus (strain R29)

Query: 3 EIADPIC 9
E DPIC
Sbjct: 464 EFCDPIC 470


>sp|YR748_MIMIV|PUTATIVE ankyrin repeat protein R748|Acanthamoeba polyphaga mimivirus (APMV)

Query: 6 DPICD 10
DP+CD
Sbjct: 529 DPVCD 533


>sp|441R_IIV6|UNCHARACTERIZED protein 441R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 VVEIADPIC 9
+ + ADP+C
Sbjct: 47 LAKFADPVC 55


>sp|RDRP_BMV|RNA-DIRECTED RNA polymerase 2a|Brome mosaic virus (BMV)

Query: 1 VVEIADPIC 9
V +++DP+C
Sbjct: 703 VYQMSDPVC 711


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 1 VVEIADPIC 9
V+ +ADP C
Sbjct: 763 VIYVADPNC 771


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1 VVEIADPIC 9
V+ +ADP C
Sbjct: 763 VIYVADPNC 771


>sp|RDRP_BBV|RNA-DIRECTED RNA polymerase|Black beetle virus (BBV)

Query: 3 EIADPICD 10
EIAD +C+
Sbjct: 567 EIADGVCE 574


>sp|RDRP_FHV|RNA-DIRECTED RNA polymerase|Flock house virus (FHV)

Query: 3 EIADPICD 10
EIAD +C+
Sbjct: 567 EIADGVCE 574




162|SequenceR|815|806|GEPKSVVEIA

>sp|5054R_ASFK5|PROTEIN MGF 505-4R|African swine fever virus (isolate

Query: 2 EPKSVVEIA 10
EPKS+ +IA
Sbjct: 187 EPKSIFDIA 195




163|SequenceR|820|811|FQIKTGEPKS

***** No hits found ******


164|SequenceR|825|816|KRTGLFQIKT

>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 3 TGLFQIKT 10
+GLFQ+KT
Sbjct: 931 SGLFQLKT 938


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 3 TGLFQIKT 10
+GLFQ+KT
Sbjct: 931 SGLFQLKT 938


>sp|DPOL_HHBV|PROTEIN P|Heron hepatitis B virus (HHBV)

Query: 1 KRTGLFQIK 9
K TGL+Q+K
Sbjct: 91 KLTGLYQMK 99




165|SequenceR|830|821|TETLSKRTGL

>sp|CATV_NPVHC|VIRAL cathepsin|Hyphantria cunea nuclear polyhedrosis virus

Query: 2 ETLSKRTGL 10
ET+SK TGL
Sbjct: 83 ETISKYTGL 91


>sp|CATV_NPVCF|VIRAL cathepsin|Choristoneura fumiferana nuclear polyhedrosis virus

Query: 2 ETLSKRTGL 10
ET+SK TGL
Sbjct: 83 ETISKYTGL 91


>sp|CATV_NPVCD|VIRAL cathepsin|Choristoneura fumiferana defective polyhedrosis virus

Query: 2 ETLSKRTGL 10
ET+SK TGL
Sbjct: 83 ETISKYTGL 91


>sp|CATV_NPVAP|VIRAL cathepsin|Antheraea pernyi nuclear polyhedrosis virus

Query: 2 ETLSKRTGL 10
ET+SK TGL
Sbjct: 83 ETISKYTGL 91


>sp|CATV_NPVR1|VIRAL cathepsin|Rachiplusia ou multiple nucleopolyhedrovirus (strain

Query: 2 ETLSKRTGL 10
ET++K TGL
Sbjct: 82 ETIAKYTGL 90


>sp|CATV_NPVEP|VIRAL cathepsin|Epiphyas postvittana nucleopolyhedrovirus (EppoMNPV)

Query: 2 ETLSKRTGL 10
ET++K TGL
Sbjct: 82 ETIAKYTGL 90


>sp|CATV_NPVBM|VIRAL cathepsin|Bombyx mori nuclear polyhedrosis virus

Query: 2 ETLSKRTGL 10
ET++K TGL
Sbjct: 82 ETIAKYTGL 90


>sp|CATV_NPVAC|VIRAL cathepsin|Autographa californica nuclear polyhedrosis virus

Query: 2 ETLSKRTGL 10
ET++K TGL
Sbjct: 82 ETIAKYTGL 90




166|SequenceR|835|826|PKTLETETLS

>sp|ALYS_BPHB3|LYTIC amidase|Streptococcus pneumoniae phage HB-3

Query: 1 PKTLETETLS 10
PKTL+T+ L+
Sbjct: 119 PKTLDTDDLA 128


>sp|YR455_MIMIV|UNCHARACTERIZED protein R455|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PKTLETET 8
PK +ETET
Sbjct: 208 PKVIETET 215


>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 PKTLETETLS 10
P+ L+TET+S
Sbjct: 1140 PQLLDTETIS 1149


>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 PKTLETETLS 10
P+ L+TET+S
Sbjct: 1140 PQLLDTETIS 1149




167|SequenceR|840|831|LYLYNPKTLE

>sp|NCAP_FIPV|NUCLEOPROTEIN coronavirus (strain FIPV WSU-79/1146)

Query: 1 LYLYNPKTLE 10
L YNP TLE
Sbjct: 33 LSFYNPITLE 42


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 1 LYLYNPKTL 9
L LYNPK +
Sbjct: 5944 LKLYNPKAI 5952


Query: 2 YLYNPKTLE 10
YLYNP ++
Sbjct: 5858 YLYNPYCID 5866


>sp|ENLYS_BPT1|SAR-ENDOLYSIN phage T1 (Bacteriophage T1)

Query: 1 LYLYNPKT 8
+Y YNPKT
Sbjct: 131 VYYYNPKT 138


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 LYLYNPKTL 9
L LYNPK +
Sbjct: 5955 LKLYNPKAI 5963


>sp|YR390_MIMIV|UNCHARACTERIZED protein R390|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 YLYNPKTL 9
YLYNPK +
Sbjct: 15 YLYNPKIV 22


>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)

Query: 1 LYLYNPKT 8
L+ YNP+T
Sbjct: 658 LFSYNPQT 665


>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)

Query: 1 LYLYNPKT 8
L+ YNP+T
Sbjct: 658 LFSYNPQT 665


>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann

Query: 1 LYLYNPKT 8
L+ YNP+T
Sbjct: 658 LFSYNPQT 665


>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann

Query: 1 LYLYNPKT 8
L+ YNP+T
Sbjct: 658 LFSYNPQT 665


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 2 YLYNPKTLE 10
YLYNP ++
Sbjct: 5760 YLYNPYCID 5768


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 YLYNP 6
YLYNP
Sbjct: 6216 YLYNP 6220


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 2 YLYNPKTLE 10
YLYNP ++
Sbjct: 5785 YLYNPYCID 5793


>sp|VNS3_DSDNV|NON-STRUCTURAL protein NS3|Diatraea saccharalis densovirus (DsDNV)

Query: 4 YNPKTL 9
YNPKTL
Sbjct: 21 YNPKTL 26


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 YLYNP 6
YLYNP
Sbjct: 6220 YLYNP 6224


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 2 YLYNP 6
YLYNP
Sbjct: 6164 YLYNP 6168


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3 LYNPKTL 9
LYNPK +
Sbjct: 5914 LYNPKAI 5920


>sp|PG064_VACCW|PROTEIN OPG064|Vaccinia virus (strain Western Reserve)

Query: 1 LYLYNPKTL 9
LYL+ P+T+
Sbjct: 60 LYLFKPRTV 68


>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 LYLYNPKTL 9
LYL+ P+T+
Sbjct: 60 LYLFKPRTV 68


>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)

Query: 1 LYLYNPKTL 9
LYL+ P+T+
Sbjct: 60 LYLFKPRTV 68


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 2 YLYNP 6
YLYNP
Sbjct: 6134 YLYNP 6138


>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 LYLYNPKTL 9
LYL+ P+T+
Sbjct: 60 LYLFKPRTV 68


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 2 YLYNP 6
YLYNP
Sbjct: 6134 YLYNP 6138


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 2 YLYNP 6
YLYNP
Sbjct: 6134 YLYNP 6138


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 2 YLYNP 6
YLYNP
Sbjct: 6134 YLYNP 6138


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2 YLYNP 6
YLYNP
Sbjct: 6134 YLYNP 6138


>sp|YL076_MIMIV|PUTATIVE BTB/POZ domain-containing protein L76|Acanthamoeba polyphaga

Query: 2 YLYNPKTL 9
++YNP+T+
Sbjct: 470 HVYNPRTM 477


>sp|L_TAVCV|RNA-DIRECTED RNA polymerase L|Taro vein chlorosis virus (TAVCV)

Query: 2 YLYNPKTLE 10
Y+ NP TLE
Sbjct: 1571 YVCNPVTLE 1579




168|SequenceR|845|836|KETPLLYLYN

>sp|YL520_MIMIV|PUTATIVE BTB/POZ domain-containing protein L520|Acanthamoeba polyphaga

Query: 1 KETPLLYLYN 10
KE P+LY+Y+
Sbjct: 672 KEIPMLYVYD 681


>sp|DPOL_EHV2|DNA polymerase catalytic subunit|Equine herpesvirus 2 (strain 86/87)

Query: 1 KETPLLY 7
KETP+LY
Sbjct: 58 KETPILY 64


>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate

Query: 1 KETPLLYLY 9
K TPLLY++
Sbjct: 232 KLTPLLYIW 240


>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1

Query: 1 KETPLLYLY 9
K TPLLY++
Sbjct: 232 KLTPLLYIW 240


>sp|051R_FRG3G|UNCHARACTERIZED protein 051R|Frog virus 3 (isolate Goorha)

Query: 2 ETPLLYLYN 10
+TPL Y YN
Sbjct: 317 DTPLHYAYN 325


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 2 ETPLLYLYN 10
+TP++Y Y+
Sbjct: 501 DTPIVYFYD 509


>sp|AP3A_SARS2|ORF3A protein|Severe acute respiratory syndrome coronavirus

Query: 2 ETPLLYLY 9
E P LYLY
Sbjct: 102 EAPFLYLY 109


>sp|NS2_HRSV|NON-STRUCTURAL protein 2|Human respiratory syncytial virus

Query: 1 KETPLLYLYN 10
K TP++Y Y+
Sbjct: 112 KHTPIIYKYD 121


>sp|NS2_HRSVB|NON-STRUCTURAL protein 2|Human respiratory syncytial virus B

Query: 1 KETPLLYLYN 10
K TP++Y Y+
Sbjct: 112 KHTPIIYKYD 121


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 1 KETPLLYLYN 10
KETP L + N
Sbjct: 1455 KETPFLTIVN 1464


>sp|NS2_HRSVA|NON-STRUCTURAL protein 2|Human respiratory syncytial virus A

Query: 1 KETPLLYLYN 10
K TP++Y Y+
Sbjct: 112 KHTPIIYKYD 121


>sp|NS2_HRSV1|NON-STRUCTURAL protein 2|Human respiratory syncytial virus B

Query: 1 KETPLLYLYN 10
K TP++Y Y+
Sbjct: 112 KHTPIIYKYD 121




169|SequenceR|850|841|PGSHNKETPL

>sp|YL294_MIMIV|UNCHARACTERIZED protein L294|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PGSHNKE 7
PG HNKE
Sbjct: 2520 PGVHNKE 2526


>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)

Query: 1 PGSHNKETP 9
PG+ N ETP
Sbjct: 531 PGAWNTETP 539


>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)

Query: 1 PGSHNKETP 9
PG+ N ETP
Sbjct: 531 PGAWNTETP 539


>sp|RDRP_LOLV|RNA-DIRECTED RNA polymerase|Lolium latent virus (isolate Lolium/USA/US1/-)

Query: 1 PGSHNKETPL 10
P SHN +TPL
Sbjct: 316 PVSHNVQTPL 325


>sp|REF_BPP1|RECOMBINATION enhancement function protein|Escherichia phage P1 (Bacteriophage

Query: 1 PGSHNKETPL 10
PG H K+ PL
Sbjct: 120 PGCHKKQLPL 129


>sp|VP5_IPNVS|PROTEIN VP5|Infectious pancreatic necrosis virus (strain

Query: 1 PGSHNKETPL 10
PG HN ET L
Sbjct: 27 PGRHNGETHL 36


>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus

Query: 2 GSHNKETP 9
GS+ KETP
Sbjct: 1056 GSYRKETP 1063


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 PGSHNKET 8
PG +NK+T
Sbjct: 761 PGDYNKKT 768


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 PGSHNKET 8
PG +NK+T
Sbjct: 761 PGDYNKKT 768


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 PGSHNKET 8
PG +NK+T
Sbjct: 761 PGDYNKKT 768


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 PGSHNKET 8
PG +NK+T
Sbjct: 761 PGDYNKKT 768


>sp|VP5_IPNVN|PROTEIN VP5|Infectious pancreatic necrosis virus (strain

Query: 1 PGSHNKET 8
PG HN ET
Sbjct: 42 PGRHNGET 49




170|SequenceR|855|846|CICPGPGSHN

>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 ICPGPGSHN 10
ICP PG N
Sbjct: 22 ICPAPGVGN 30


>sp|UB403_WSSVS|RING finger containing E3 ubiquitin-protein|White spot syndrome virus

Query: 3 CPGPG 7
CPGPG
Sbjct: 7 CPGPG 11


>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1

Query: 3 CPGPGSH 9
CP PG+H
Sbjct: 256 CPLPGNH 262


>sp|POLN_AURAV|POLYPROTEIN P1234|Aura virus (AURAV)

Query: 4 PGPGSHN 10
PGPG H+
Sbjct: 914 PGPGGHD 920


>sp|E312_ADE12|EARLY E3A 12.1 kDa protein|Human adenovirus A serotype 12

Query: 1 CICPGPGSH 9
CICP PG H
Sbjct: 83 CICPVPGLH 91


>sp|E1B55_ADECT|E1B 55 kDa protein|Canine adenovirus serotype 2 (strain

Query: 1 CICPGPGSH 9
C C G GSH
Sbjct: 307 CTCEGNGSH 315


>sp|E1B55_ADECC|E1B 55 kDa protein|Canine adenovirus serotype 1 (strain

Query: 1 CICPGPGSH 9
C C G GSH
Sbjct: 307 CTCEGNGSH 315


>sp|E1B55_ADECR|E1B 55 kDa protein|Canine adenovirus serotype 1 (strain

Query: 1 CICPGPGSH 9
C C G GSH
Sbjct: 307 CTCEGNGSH 315


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 3 CPGPGSH 9
CPGP H
Sbjct: 70 CPGPHGH 76


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 3 CPGPGSH 9
CPGP H
Sbjct: 70 CPGPHGH 76


>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 CICPGPG 7
C PGPG
Sbjct: 150 CFYPGPG 156


>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 3 CPGPGSH 9
CPGP H
Sbjct: 70 CPGPHGH 76


>sp|IR11_HCMVA|VIRAL Fc-gamma receptor-like protein IR11|Human cytomegalovirus (strain

Query: 1 CICPGPG 7
C PGPG
Sbjct: 150 CFYPGPG 156


>sp|POLG_BOVEV|GENOME polyprotein|Bovine enterovirus (strain VG-5-27) (BEV)

Query: 4 PGPGSH 9
PGPGS+
Sbjct: 323 PGPGSY 328


>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 3 CPGPGSH 9
CP PG H
Sbjct: 256 CPLPGYH 262


>sp|ENV_SFVCP|ENVELOPE glycoprotein gp130|Simian foamy virus (isolate chimpanzee)

Query: 3 CPGPGSH 9
CP PG H
Sbjct: 256 CPLPGYH 262


>sp|PORTL_BPG20|PORTAL protein|Thermus phage G20c (Thermus thermophilus

Query: 2 ICPGPGS 8
+ PGPGS
Sbjct: 11 LVPGPGS 17


>sp|PORTL_BP234|PORTAL protein|Thermus virus P23-45 (Thermus thermophilus

Query: 2 ICPGPGS 8
+ PGPGS
Sbjct: 11 LVPGPGS 17


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 2 ICPGPGSHN 10
+ PGP SH+
Sbjct: 1769 LIPGPPSHH 1777


>sp|VG65_BPMD2|GENE 65 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 ICPGPGS 8
+C GPG+
Sbjct: 4 VCAGPGT 10


>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 3 CPGPGSH 9
CPGP H
Sbjct: 70 CPGPHGH 76


>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 3 CPGPGSH 9
CPGP H
Sbjct: 70 CPGPHGH 76


>sp|E312_ADE02|EARLY E3A 12.5 kDa protein|Human adenovirus C serotype 2

Query: 1 CICPGPGSH 9
C CP PG H
Sbjct: 83 CNCPNPGLH 91


>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 3 CPGPGSH 9
CPGP H
Sbjct: 70 CPGPHGH 76


>sp|GAG_MLVDU|GAG polyprotein|Duplan murine leukemia virus

Query: 3 CPGPGSH 9
CPGP H
Sbjct: 70 CPGPHGH 76


>sp|GAG_MLVDE|GAG polyprotein|Murine leukemia virus (strain DEF27)

Query: 3 CPGPGSH 9
CPGP H
Sbjct: 70 CPGPHGH 76


>sp|VG65_BPML5|GENE 65 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 2 ICPGPGS 8
+C GPG+
Sbjct: 40 VCAGPGT 46


>sp|ENV_SMRVH|ENVELOPE glycoprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 1 CICPGPGS 8
+CPGPG
Sbjct: 326 ALCPGPGQ 333


>sp|SPIKE_BRV1|SPIKE glycoprotein|Breda virus 1 (BRV-1)

Query: 2 ICPGPGSHN 10
ICPG + N
Sbjct: 834 ICPGSSASN 842


>sp|NEF_HV1MV|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 CICPGPG 7
C PGPG
Sbjct: 131 CYTPGPG 137


>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P

Query: 1 CICPGPG 7
C+CPG G
Sbjct: 616 CVCPGSG 622


>sp|VP22_GAHVM|TEGUMENT protein VP22|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 4 PGPGSH 9
P PGSH
Sbjct: 217 PDPGSH 222


>sp|VP03_ALHV1|PROBABLE tegument protein antigen 3|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 CICPGP 6
C+ PGP
Sbjct: 823 CVVPGP 828


>sp|E312_ADE03|PROBABLE early E3 12.1 kDa|Human adenovirus B serotype 3

Query: 1 CICPGPGSHN 10
CIC PG H
Sbjct: 84 CICNHPGLHE 93


>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United

Query: 3 CPGPGSHN 10
PGPG++N
Sbjct: 425 MPGPGAYN 432


>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 CICPGPG 7
C CPG G
Sbjct: 173 CDCPGGG 179


>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 CICPGPG 7
C CPG G
Sbjct: 173 CDCPGGG 179


>sp|AC4_PYMVV|PROTEIN AC4|Potato yellow mosaic virus (isolate

Query: 3 CPGPGSH 9
CP PG H
Sbjct: 27 CPRPGQH 33


>sp|YR419_MIMIV|UNCHARACTERIZED short-chain type dehydrogenase/reductase R419|Acanthamoeba

Query: 1 CICPGP 6
CI PGP
Sbjct: 255 CIAPGP 260




171|SequenceR|860|851|TLNEFCICPG

>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 FCICPG 10
FC CPG
Sbjct: 172 FCDCPG 177


>sp|YL308_MIMIV|UNCHARACTERIZED protein L308|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 NEFCICP 9
NE+ ICP
Sbjct: 56 NEYIICP 62


>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 FCICPG 10
FC CPG
Sbjct: 172 FCDCPG 177


>sp|VPK2_FOWPN|SERINE/THREONINE-PROTEIN kinase 2|Fowlpox virus (strain NVSL) (FPV)

Query: 2 LNEFCIC 8
LNEF IC
Sbjct: 396 LNEFTIC 402


>sp|KTHY_ASFM2|TRUNCATED thymidylate kinase|African swine fever virus (isolate

Query: 3 NEFCICPG 10
N+FCI P
Sbjct: 133 NKFCIIPA 140


>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)

Query: 1 TLNEFCI 7
T+NE+CI
Sbjct: 537 TMNEYCI 543


>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)

Query: 1 TLNEFCI 7
T+NE+CI
Sbjct: 537 TMNEYCI 543


>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)

Query: 1 TLNEFCI 7
T+NE+CI
Sbjct: 537 TMNEYCI 543


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 1 TLNEFCI 7
TLN++CI
Sbjct: 1728 TLNDYCI 1734


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 1 TLNEFCI 7
TLN++CI
Sbjct: 1728 TLNDYCI 1734


>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5 FCICPG 10
FCIC G
Sbjct: 566 FCICTG 571


>sp|VF111_ASFK5|UNCHARACTERIZED protein E111R|African swine fever virus (isolate

Query: 1 TLNEFCICP 9
TLNE C+ P
Sbjct: 41 TLNELCLLP 49


>sp|Y022_OSHVF|UNCHARACTERIZED protein ORF22|Ostreid herpesvirus 1 (isolate France)

Query: 2 LNEFCICPG 10
LN+F + PG
Sbjct: 824 LNKFIVVPG 832


>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)

Query: 2 LNEFCIC 8
+ +FCIC
Sbjct: 560 IKQFCIC 566


>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus

Query: 3 NEFCICPG 10
N+ C+C G
Sbjct: 665 NKLCLCGG 672


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 3 NEFCICPG 10
N+ C+ PG
Sbjct: 271 NKLCVVPG 278


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3 NEFCICPG 10
N+ C+ PG
Sbjct: 271 NKLCVVPG 278


>sp|YR034_MIMIV|UNCHARACTERIZED protein R34|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 FCICPG 10
FC+C G
Sbjct: 6 FCLCDG 11




172|SequenceR|865|856|AAQNYTLNEF

>sp|024R_FRG3G|UNCHARACTERIZED protein 024R|Frog virus 3 (isolate Goorha)

Query: 1 AAQNYTLNE 9
A +NYT+NE
Sbjct: 328 APENYTVNE 336


>sp|YR842_MIMIV|PUTATIVE BTB/POZ domain-containing protein R842|Acanthamoeba polyphaga

Query: 2 AQNYTLNEF 10
+QNY++N F
Sbjct: 3 SQNYSINNF 11


>sp|VP16_GAHVM|TEGUMENT protein VP16 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 AQNYTLNEF 10
AQNY +EF
Sbjct: 316 AQNYIRSEF 324




173|SequenceR|870|861|SGSDSAAQNY

>sp|LTP_MHV68|LARGE tegument protein deneddylase|Murid herpesvirus 4 (MuHV-4) (Murine

Query: 1 SGSDSAAQN 9
+G+DSA QN
Sbjct: 2206 AGADSAGQN 2214




174|SequenceR|875|866|PVHGCSGSDS

>sp|RDRP_NMV|RNA replication protein|Narcissus mosaic virus (NMV)

Query: 2 VHGCSGS 8
+HGC GS
Sbjct: 866 IHGCGGS 872


>sp|SPIKE_CVBV|SPIKE glycoprotein|Bovine coronavirus (strain vaccine) (BCoV)

Query: 1 PVHGCSGSD 9
PV GC GSD
Sbjct: 898 PVLGCLGSD 906


>sp|SPIKE_CVBM|SPIKE glycoprotein|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 PVHGCSGSD 9
PV GC GSD
Sbjct: 898 PVLGCLGSD 906


>sp|SPIKE_CVBEN|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 PVHGCSGSD 9
PV GC GSD
Sbjct: 898 PVLGCLGSD 906


>sp|SPIKE_CVBLY|SPIKE glycoprotein|Bovine coronavirus (strain LY-138) (BCoV)

Query: 1 PVHGCSGSD 9
PV GC GSD
Sbjct: 898 PVLGCLGSD 906


>sp|SPIKE_CVBOK|SPIKE glycoprotein|Bovine coronavirus (strain OK-0514) (BCoV)

Query: 1 PVHGCSGSD 9
PV GC GSD
Sbjct: 898 PVLGCLGSD 906


>sp|SPIKE_CVBLU|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 PVHGCSGSD 9
PV GC GSD
Sbjct: 898 PVLGCLGSD 906


>sp|SPIKE_CVBLS|SPIKE glycoprotein|Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU)

Query: 1 PVHGCSGSD 9
PV GC GSD
Sbjct: 898 PVLGCLGSD 906


>sp|SPIKE_CVBL9|SPIKE glycoprotein|Bovine coronavirus (strain L9) (BCoV)

Query: 1 PVHGCSGSD 9
PV GC GSD
Sbjct: 898 PVLGCLGSD 906


>sp|VE1_BPV6|REPLICATION protein E1|Bos taurus papillomavirus 6 (Bovine

Query: 5 CSGSDS 10
CSGSDS
Sbjct: 20 CSGSDS 25


>sp|LTP_EHV1B|LARGE tegument protein deneddylase|Equine herpesvirus 1 (strain Ab4p)

Query: 1 PVHGCSGSDS 10
PVHG SDS
Sbjct: 2771 PVHGLPPSDS 2780


>sp|RDRP_NCBVS|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Nudaurelia capensis beta virus (isolate

Query: 2 VHGCSGSDS 10
VHGC+ SD+
Sbjct: 100 VHGCTFSDA 108


>sp|RPB1_FRG3G|PUTATIVE DNA-directed RNA polymerase 008R|Frog virus 3 (isolate Goorha)

Query: 2 VHGCSGSD 9
VHGC G D
Sbjct: 547 VHGCEGWD 554


>sp|RDRP_LOLV|RNA-DIRECTED RNA polymerase|Lolium latent virus (isolate Lolium/USA/US1/-)

Query: 1 PVHGCSGS 8
P HGC S
Sbjct: 671 PAHGCQMS 678


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 1 PVHGCSGSD 9
PV GC GS+
Sbjct: 888 PVLGCLGSE 896


>sp|SPIKE_CVRSD|SPIKE glycoprotein|Rat coronavirus (strain 681) (RCV-SDAV)

Query: 1 PVHGCSGSD 9
P+ GC GSD
Sbjct: 886 PLLGCLGSD 894


>sp|ENV_THOGV|ENVELOPE glycoprotein|Thogoto virus (isolate SiAr 126)

Query: 3 HGCSGSDS 10
H C GSDS
Sbjct: 113 HDCWGSDS 120


>sp|SPIKE_CVP67|SPIKE glycoprotein|Porcine hemagglutinating encephalomyelitis virus

Query: 1 PVHGCSGSD 9
PV GC GS+
Sbjct: 884 PVLGCLGSE 892


>sp|SPIKE_CVBF|SPIKE glycoprotein|Bovine coronavirus (strain F15) (BCoV)

Query: 1 PVHGCSGSD 9
PV GC GS+
Sbjct: 898 PVLGCLGSE 906


>sp|UNG_EHV2|URACIL-DNA glycosylase|Equine herpesvirus 2 (strain 86/87)

Query: 1 PVHGC 5
P+HGC
Sbjct: 131 PLHGC 135


>sp|HEMA_CDVO|HEMAGGLUTININ glycoprotein|Canine distemper virus (strain Onderstepoort)

Query: 1 PVHGCSGSDS 10
P H CSG+ +
Sbjct: 184 PPHRCSGATT 193


>sp|HEMA_CDVC|HEMAGGLUTININ glycoprotein|Canine distemper virus (strain Convac

Query: 1 PVHGCSGSDS 10
P H CSG+ +
Sbjct: 184 PPHRCSGATT 193


>sp|V204_FOWPN|UNCHARACTERIZED serpin-like protein FPV204|Fowlpox virus (strain NVSL) (FPV)

Query: 3 HGCSGS 8
HGC+G+
Sbjct: 33 HGCNGN 38


>sp|MCP_PSHV1|MAJOR capsid protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 HGCSGSDS 10
HGCS S +
Sbjct: 4 HGCSSSQA 11




175|SequenceR|880|871|AKPSVPVHGC

>sp|RDRP_ASPVP|RNA replication polyprotein|Apple stem pitting virus (isolate

Query: 2 KPSVPVHGC 10
KP +PV+GC
Sbjct: 1194 KPCMPVNGC 1202


>sp|E1A_ADES7|EARLY E1A protein|Simian adenovirus serotype 7 (SAdV-7)

Query: 3 PSVPVHGC 10
PSVP HGC
Sbjct: 153 PSVPGHGC 160


>sp|ESTE_SFAVA|PUTATIVE esterase|Spodoptera frugiperda ascovirus 1a (SfAV-1a)

Query: 3 PSVPVH 8
PSVPVH
Sbjct: 320 PSVPVH 325


>sp|G1P_BPPF3|PUTATIVE Gene 1 protein|Pseudomonas phage Pf3 (Bacteriophage Pf3)

Query: 1 AKPSVPVHGC 10
A P+VPV GC
Sbjct: 249 AAPAVPVSGC 258


>sp|UNG_EHV2|URACIL-DNA glycosylase|Equine herpesvirus 2 (strain 86/87)

Query: 4 SVPVHGC 10
+VP+HGC
Sbjct: 129 AVPLHGC 135


>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P

Query: 4 SVPVHGC 10
S P HGC
Sbjct: 127 STPSHGC 133


>sp|L_TAVCV|RNA-DIRECTED RNA polymerase L|Taro vein chlorosis virus (TAVCV)

Query: 2 KPSVPVHG 9
KP +P HG
Sbjct: 857 KPELPDHG 864


>sp|POLS_IBDVE|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 2 KPSVPVH 8
+P VP+H
Sbjct: 664 RPKVPIH 670


>sp|POLS_IBDVU|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 2 KPSVPVH 8
+P VP+H
Sbjct: 664 RPKVPIH 670


>sp|POLS_IBDVS|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 2 KPSVPVH 8
+P VP+H
Sbjct: 664 RPKVPIH 670


>sp|POLS_IBDVA|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 2 KPSVPVH 8
+P VP+H
Sbjct: 664 RPKVPIH 670


>sp|POLS_IBDV5|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 2 KPSVPVH 8
+P VP+H
Sbjct: 664 RPKVPIH 670


>sp|POLS_IBDVC|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 2 KPSVPVH 8
+P VP+H
Sbjct: 664 RPKVPIH 670


>sp|POLS_IBDV|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 2 KPSVPVH 8
+P VP+H
Sbjct: 664 RPKVPIH 670


>sp|POLS_IBDVO|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 2 KPSVPVH 8
+P VP+H
Sbjct: 665 RPKVPIH 671


>sp|POLS_IBDVB|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 2 KPSVPVH 8
+P VP+H
Sbjct: 664 RPKVPIH 670


>sp|VF380_IIV3|PROBABLE serine/threonine-protein kinase 010L|Invertebrate iridescent virus

Query: 1 AKPSVPV 7
+KPS+PV
Sbjct: 441 SKPSIPV 447


>sp|POLS_IBDVP|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 2 KPSVPVH 8
+P VP+H
Sbjct: 645 RPKVPIH 651


>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65

Query: 2 KPSVPVHG 9
+P+VPV G
Sbjct: 86 RPTVPVEG 93




176|SequenceR|885|876|GLMSPAKPSV

>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)

Query: 1 GLMSPAKPSV 10
GL SP KP +
Sbjct: 365 GLFSPVKPGL 374


>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 GLMSPAKPSV 10
GL SP KP +
Sbjct: 365 GLFSPVKPGL 374


>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)

Query: 2 LMSPAKPSV 10
+MSP KPS+
Sbjct: 358 MMSPWKPSL 366


>sp|Y059_OSHVF|UNCHARACTERIZED protein ORF59|Ostreid herpesvirus 1 (isolate France)

Query: 2 LMSPAKPSV 10
L++P KPSV
Sbjct: 631 LITPPKPSV 639


>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 MSPAKPS 9
M PAKPS
Sbjct: 1 MEPAKPS 7


>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)

Query: 3 MSPAKPS 9
M PAKPS
Sbjct: 1 MEPAKPS 7


>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 MSPAKPS 9
M PAKPS
Sbjct: 1 MEPAKPS 7


>sp|NCAP_IPPYV|NUCLEOPROTEIN mammarenavirus (isolate Rat/Central African

Query: 3 MSPAKP 8
MSPAKP
Sbjct: 350 MSPAKP 355




177|SequenceR|890|881|PSTMLGLMSP

***** No hits found ******


178|SequenceR|895|886|KLVNEPSTML

>sp|RDRP_RRSVT|RNA-DIRECTED RNA polymerase|Rice ragged stunt virus (isolate

Query: 2 LVNEPSTML 10
L N+PST+L
Sbjct: 688 LTNQPSTLL 696


>sp|VG27_ICHVA|UNCHARACTERIZED protein ORF27|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 KLVNEPSTML 10
K+V+E STML
Sbjct: 227 KIVDEFSTML 236


>sp|L_SFTS|RNA-DIRECTED RNA polymerase L|Dabie bandavirus (Severe fever with

Query: 2 LVNEPSTML 10
LVN P TML
Sbjct: 609 LVNLPCTML 617


>sp|PHOSP_SHRV|PHOSPHOPROTEIN rhabdovirus (SHRV)

Query: 1 KLVNEPSTML 10
+LV+ PST+L
Sbjct: 10 ELVSSPSTLL 19




179|SequenceR|900|891|NKELAKLVNE

>sp|VSP1_BPLLH|STRUCTURAL protein|Lactococcus phage LL-H (Lactococcus delbrueckii

Query: 1 NKELAKLVNE 10
NK+LAK++N+
Sbjct: 86 NKDLAKVLNQ 95


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 NKELAKLVN 9
N ELA LVN
Sbjct: 5503 NDELAALVN 5511


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 NKELAKLVN 9
N ELA LVN
Sbjct: 5501 NDELAALVN 5509


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 NKELAKLVN 9
N ELA LVN
Sbjct: 5501 NDELAALVN 5509


>sp|SHUT_ADECR|SHUTOFF protein|Canine adenovirus serotype 1 (strain

Query: 2 KELAKLVNE 10
KELAKLV +
Sbjct: 389 KELAKLVQK 397


>sp|SHUT_ADECC|SHUTOFF protein|Canine adenovirus serotype 1 (strain

Query: 2 KELAKLVNE 10
KELAKLV +
Sbjct: 389 KELAKLVQK 397




180|SequenceR|905|896|LSNMYNKELA

***** No hits found ******


181|SequenceR|910|901|APIEGLSNMY

>sp|RDRP_SCVLA|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-A

Query: 1 APIEGLSNMY 10
AP+ G+S++Y
Sbjct: 418 APLNGMSDVY 427


>sp|NSP1_ROTBB|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Cow/United

Query: 3 IEGLSNMY 10
+EGL NMY
Sbjct: 95 VEGLINMY 102


>sp|GAG_SCVLA|MAJOR capsid protein|Saccharomyces cerevisiae virus L-A (ScV-L-A)

Query: 1 APIEGLSNMY 10
AP+ G+S++Y
Sbjct: 418 APLNGMSDVY 427


>sp|HOC_BPT4|HIGHLY immunogenic outer capsid protein|Enterobacteria phage T4

Query: 1 APIEGLSNMY 10
+P+EG +N+Y
Sbjct: 234 SPVEGSTNVY 243


>sp|GB_ALHV1|ENVELOPE glycoprotein B|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 PIEGLSN 8
P++GLSN
Sbjct: 187 PVDGLSN 193


>sp|NTP1_CFEPV|NUCLEOSIDE triphosphatase I|Choristoneura fumiferana entomopoxvirus (CfEPV)

Query: 1 APIEGLSNMY 10
+PIE + NMY
Sbjct: 543 SPIEIIHNMY 552


>sp|GRAN_GVAS|GRANULIN segetum granulosis virus (AsGV)

Query: 1 APIEGLSNMY 10
AP++ L+N Y
Sbjct: 46 APLKDLANQY 55




182|SequenceR|915|906|LSTEGAPIEG

>sp|M2_I83A6|MATRIX protein 2|Influenza A virus (strain

Query: 2 STEGAP 7
STEGAP
Sbjct: 64 STEGAP 69


>sp|M2_I83A5|MATRIX protein 2|Influenza A virus (strain A/Chicken/Pennsylvania/1/1983

Query: 2 STEGAP 7
STEGAP
Sbjct: 64 STEGAP 69


>sp|VF233_ASFWA|UNCHARACTERIZED protein H233R|African swine fever virus (isolate

Query: 2 STEGAPIEG 10
+ EG P+EG
Sbjct: 196 TAEGIPLEG 204


>sp|VF233_ASFP4|UNCHARACTERIZED protein H233R|African swine fever virus (isolate

Query: 2 STEGAPIEG 10
+ EG P+EG
Sbjct: 196 TAEGIPLEG 204


>sp|VF233_ASFM2|UNCHARACTERIZED protein H233R|African swine fever virus (isolate

Query: 2 STEGAPIEG 10
+ EG P+EG
Sbjct: 196 TAEGIPLEG 204


>sp|VF233_ASFK5|UNCHARACTERIZED protein H233R|African swine fever virus (isolate

Query: 2 STEGAPIEG 10
+ EG P+EG
Sbjct: 196 TAEGIPLEG 204


>sp|VF233_ASFB7|UNCHARACTERIZED protein H233R|African swine fever virus (strain

Query: 2 STEGAPIEG 10
+ EG P+EG
Sbjct: 196 TAEGIPLEG 204


>sp|POL_WMSV|GAG-POL polyprotein|Woolly monkey sarcoma virus (WMSV)

Query: 1 LSTEGAPIE 9
L+ EG PIE
Sbjct: 537 LTVEGTPIE 545


>sp|POL_GALV|GAG-POL polyprotein|Gibbon ape leukemia virus (GALV)

Query: 1 LSTEGAPIE 9
L+ EG PIE
Sbjct: 536 LTVEGTPIE 544


>sp|YL631_MIMIV|UNCHARACTERIZED protein L631|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 STEGAPIE 9
ST+GAP++
Sbjct: 8 STQGAPLD 15




183|SequenceR|920|911|QSVYNLSTEG

>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 4 YNLSTEG 10
YNLST+G
Sbjct: 1975 YNLSTQG 1981


>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United

Query: 4 YNLSTEG 10
YNLST+G
Sbjct: 2090 YNLSTDG 2096


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 4 YNLSTEG 10
YNLST+G
Sbjct: 2090 YNLSTDG 2096


>sp|POL1_SDVS5|RNA1 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 2 SVYNLST 8
SVYNL+T
Sbjct: 1808 SVYNLTT 1814


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 SVYNLSTEG 10
S Y+LST+G
Sbjct: 2717 SKYDLSTQG 2725


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 SVYNLSTEG 10
S Y+LST+G
Sbjct: 2746 SKYDLSTQG 2754


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 SVYNLSTEG 10
S Y+LST+G
Sbjct: 2747 SKYDLSTQG 2755


>sp|DPOL_RSIV|DNA polymerase|Red sea bream iridovirus (RSIV)

Query: 2 SVYNLSTEG 10
SVY +TEG
Sbjct: 220 SVYQYATEG 228




184|SequenceR|925|916|MPSALQSVYN

>sp|NSP1_ROTRA|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Rabbit/United

Query: 1 MPSALQSVY 9
+PS LQS+Y
Sbjct: 197 LPSNLQSIY 205


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1 MPSALQSVY 9
+P A QSVY
Sbjct: 453 VPDAFQSVY 461


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1 MPSALQSVY 9
+P A QSVY
Sbjct: 453 VPDAFQSVY 461


>sp|GRAN_GVHB|GRANULIN brillians granulovirus (HbGV)

Query: 3 SALQSVYN 10
+ LQSVYN
Sbjct: 184 TCLQSVYN 191


>sp|GRAN_GVCL|GRANULIN leucotreta granulosis virus (ClGV)

Query: 3 SALQSVYN 10
+ LQSVYN
Sbjct: 184 TCLQSVYN 191


>sp|GRAN_GVAO|GRANULIN orana granulovirus (AoGV)

Query: 3 SALQSVYN 10
+ LQSVYN
Sbjct: 184 TCLQSVYN 191


>sp|GRAN_GVCPM|GRANULIN pomonella granulosis virus (isolate

Query: 3 SALQSVYN 10
+ LQSVYN
Sbjct: 184 TCLQSVYN 191


>sp|GRAN_GVCF|GRANULIN fumiferana granulovirus (CfGV)

Query: 3 SALQSVYN 10
+ LQSVYN
Sbjct: 184 TCLQSVYN 191


>sp|GRAN_GVAS|GRANULIN segetum granulosis virus (AsGV)

Query: 3 SALQSVYN 10
+ LQSVYN
Sbjct: 183 TCLQSVYN 190




185|SequenceR|930|921|DKDGFMPSAL

>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 DKDGFMPSA 9
++DGF PSA
Sbjct: 35 EEDGFCPSA 43


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 DKDGFMPSA 9
++DGF PSA
Sbjct: 35 EEDGFCPSA 43


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 1 DKDGFMPSA 9
++DGF PSA
Sbjct: 35 EEDGFCPSA 43


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 DKDGFMPSA 9
++DGF PSA
Sbjct: 35 EEDGFCPSA 43


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 DKDGFMPSA 9
++DGF PSA
Sbjct: 35 EEDGFCPSA 43


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 1 DKDGFMPSA 9
++DGF PSA
Sbjct: 35 EEDGFCPSA 43


>sp|Y618_ATV|STRUCTURAL protein ORF618|Acidianus two-tailed virus (ATV)

Query: 3 DGFMPSA 9
DGF+PSA
Sbjct: 115 DGFLPSA 121


>sp|R1AB_CVMJD|REPLICASE polyprotein 1ab|Murine coronavirus (strain defective JHM)

Query: 1 DKDGFMPSA 9
++DGF PSA
Sbjct: 35 EEDGFCPSA 43


>sp|POLG_BSTV1|GENOME polyprotein|Brome streak virus (strain 11-Cal)

Query: 1 DKDGFMPSAL 10
+KDG MP+ L
Sbjct: 1576 NKDGSMPTKL 1585


>sp|VP4_BTV10|CORE protein VP4|Bluetongue virus 10 (isolate USA)

Query: 2 KDGFMP 7
KDGF+P
Sbjct: 19 KDGFLP 24


>sp|NEEDL_BPSFV|TAIL needle protein|Shigella phage Sf6 (Shigella flexneri

Query: 1 DKDGFMPS 8
DKDGF+ +
Sbjct: 250 DKDGFLAT 257


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 3 DGFMP 7
DGFMP
Sbjct: 577 DGFMP 581


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 3 DGFMP 7
DGFMP
Sbjct: 577 DGFMP 581


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 3 DGFMP 7
DGFMP
Sbjct: 577 DGFMP 581


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN)

Query: 3 DGFMP 7
DGFMP
Sbjct: 577 DGFMP 581


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT)

Query: 3 DGFMP 7
DGFMP
Sbjct: 577 DGFMP 581


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3 DGFMP 7
DGFMP
Sbjct: 577 DGFMP 581


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 3 DGFMP 7
DGFMP
Sbjct: 577 DGFMP 581


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 3 DGFMP 7
DGFMP
Sbjct: 577 DGFMP 581


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN)

Query: 3 DGFMP 7
DGFMP
Sbjct: 577 DGFMP 581


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT)

Query: 3 DGFMP 7
DGFMP
Sbjct: 577 DGFMP 581


>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)

Query: 2 KDGFMPS 8
+DG+MPS
Sbjct: 15 EDGYMPS 21




186|SequenceR|935|926|NTPLSDKDGF

>sp|RDRP_PAV|RNA-DIRECTED RNA polymerase|Pariacoto virus (PaV)

Query: 1 NTPLSDKDGF 10
N P+SD GF
Sbjct: 152 NDPVSDNTGF 161


>sp|VE6_HPV24|PROTEIN E6|Human papillomavirus 24

Query: 1 NTPLSD 6
NTPLSD
Sbjct: 91 NTPLSD 96


>sp|YR635_MIMIV|UNCHARACTERIZED protein R635|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 NTPLSDKDG 9
+TPLSD+ G
Sbjct: 322 STPLSDQPG 330


>sp|VG22_ICHVA|UNCHARACTERIZED protein ORF22|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 TPLSDKD 8
TP+SD+D
Sbjct: 1346 TPVSDRD 1352


>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 LSDKDGF 10
L+D+DGF
Sbjct: 515 LNDRDGF 521




187|SequenceR|940|931|PAEVPNTPLS

>sp|S1_BPMU|TAIL fiber protein S|Escherichia phage Mu (Bacteriophage Mu)

Query: 2 AEVPNTPL 9
A++PN PL
Sbjct: 158 ADIPNKPL 165


>sp|UL15B_PSHV1|LARGE terminase protein homolog UL15b|Psittacid herpesvirus 1 (isolate

Query: 2 AEVPNTPL 9
AEV NTPL
Sbjct: 293 AEVFNTPL 300


>sp|NS1_PAVHH|INITIATOR protein NS1|Hamster parvovirus H1

Query: 1 PAEVPNTPLS 10
P PNTP++
Sbjct: 611 PWSTPNTPVA 620


>sp|CAPSD_APRVF|INNER capsid protein VP3|Aedes pseudoscutellaris reovirus (isolate

Query: 1 PAEVPNTP 8
PAE NTP
Sbjct: 919 PAEFENTP 926


>sp|VP10_NPVCF|PROTEIN p10|Choristoneura fumiferana nuclear polyhedrosis virus

Query: 2 AEVPNTPL 9
AEVP+ PL
Sbjct: 62 AEVPDVPL 69


>sp|NS1_MUMIP|INITIATOR protein NS1|Murine minute virus (strain MVM

Query: 1 PAEVPNTPLS 10
P PNTP++
Sbjct: 611 PWSTPNTPVA 620


>sp|NS1_MUMIM|INITIATOR protein NS1|Murine minute virus (strain MVMi)

Query: 1 PAEVPNTPLS 10
P PNTP++
Sbjct: 611 PWSTPNTPVA 620


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 4 VPNTPLS 10
+PNTPLS
Sbjct: 1556 LPNTPLS 1562




188|SequenceR|945|936|YESCHPAEVP

>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989

Query: 1 YESCHPAEVP 10
Y +C+P +VP
Sbjct: 110 YSNCYPYDVP 119


>sp|HEMA_I77A7|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 1 YESCHPAEVP 10
Y +C+P +VP
Sbjct: 94 YSNCYPYDVP 103


>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong

Query: 1 YESCHPAEVP 10
+ SC+P +VP
Sbjct: 94 FSSCYPYDVP 103


>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 1 YESCHPAEVP 10
+ SC+P +VP
Sbjct: 94 FSSCYPYDVP 103


>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)

Query: 1 YESCHPAEVP 10
Y SC PA++P
Sbjct: 179 YGSCDPAQLP 188


>sp|GI_HHV23|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain 333)

Query: 1 YESCHPAEVP 10
Y SC PA++P
Sbjct: 179 YGSCDPAQLP 188


>sp|HEMA_I89A7|HEMAGGLUTININ A virus (strain A/Equine/Jillin/1/1989

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 115 FSNCYPYDVP 124


>sp|HEMA_I85A2|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/10/1985

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 94 FSNCYPYDVP 103


>sp|HEMA_I85A1|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/9/1985

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 94 FSNCYPYDVP 103


>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I82A5|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/7/1982

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 94 FSNCYPYDVP 103


>sp|HEMA_I80A7|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/33/1980

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 94 FSNCYPYDVP 103


>sp|HEMA_I80A6|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/8/1980

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 94 FSNCYPYDVP 103


>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 94 FSNCYPYDVP 103


>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I77A6|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/5/1977

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 94 FSNCYPYDVP 103


>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I76AD|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 94 FSNCYPYDVP 103


>sp|HEMA_I76AC|HEMAGGLUTININ A virus (strain A/Goose/Hong

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 94 FSNCYPYDVP 103


>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I76A3|HEMAGGLUTININ A virus (strain A/Duck/Alberta/78/1976

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 111 FSNCYPYDVP 120


>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I74A2|HEMAGGLUTININ A virus (strain A/Duck/Memphis/928/1974

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I72A0|HEMAGGLUTININ A virus (strain A/Equine/Algiers/1972

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 109 FSNCYPYDVP 118


>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 109 FSNCYPYDVP 118


>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I63A2|HEMAGGLUTININ A virus (strain A/Equine/Miami/1/1963

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 109 FSNCYPYDVP 118


>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 110 FSNCYPYDVP 119


>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 94 FSNCYPYDVP 103


>sp|HEMA_I85A7|HEMAGGLUTININ A virus (strain A/Ruddy

Query: 2 ESCHPAEVP 10
++C+P +VP
Sbjct: 107 DTCYPFDVP 115


>sp|HEMA_I82A3|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/133/1982

Query: 2 ESCHPAEVP 10
++C+P +VP
Sbjct: 107 DTCYPFDVP 115


>sp|HEMA_I82A1|HEMAGGLUTININ A virus (strain A/Mallard/Astrakhan/263/1982

Query: 2 ESCHPAEVP 10
++C+P +VP
Sbjct: 111 DTCYPFDVP 119


>sp|HEMA_I82A0|HEMAGGLUTININ A virus (strain A/Mallard/Astrakhan/244/1982

Query: 2 ESCHPAEVP 10
++C+P +VP
Sbjct: 106 DTCYPFDVP 114


>sp|HEMA_I77AG|HEMAGGLUTININ A virus (strain A/Budgerigar/Hokkaido/1/1977

Query: 2 ESCHPAEVP 10
++C+P +VP
Sbjct: 107 DTCYPFDVP 115


>sp|HEMA_I76AK|HEMAGGLUTININ A virus (strain A/Duck/New

Query: 2 ESCHPAEVP 10
++C+P +VP
Sbjct: 107 DTCYPFDVP 115


>sp|HEMA_I76A1|HEMAGGLUTININ A virus (strain A/Duck/Alberta/28/1976

Query: 2 ESCHPAEVP 10
++C+P +VP
Sbjct: 107 DTCYPFDVP 115


>sp|HEMA_I75A4|HEMAGGLUTININ A virus (strain A/Chicken/Alabama/1/1975

Query: 2 ESCHPAEVP 10
++C+P +VP
Sbjct: 107 DTCYPFDVP 115


>sp|HEMA_I56A1|HEMAGGLUTININ A virus (strain A/Duck/Czechoslovakia/1956

Query: 2 ESCHPAEVP 10
++C+P +VP
Sbjct: 107 DTCYPFDVP 115


>sp|HEMA_I80A8|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/833/1980

Query: 2 ESCHPAEVP 10
++C+P +VP
Sbjct: 107 DTCYPFDVP 115


>sp|HEMA_I79A7|HEMAGGLUTININ A virus (strain A/Grey

Query: 2 ESCHPAEVP 10
++C+P +VP
Sbjct: 107 DTCYPFDVP 115


>sp|HEMA_I89A8|HEMAGGLUTININ A virus (strain A/Equine/Suffolk/1989

Query: 1 YESCHPAEVP 10
+ +C+P ++P
Sbjct: 109 FSNCYPYDIP 118


>sp|HEMA_I87A3|HEMAGGLUTININ A virus (strain A/Equine/Kentucky/1/1987

Query: 1 YESCHPAEVP 10
+ +C+P ++P
Sbjct: 109 FSNCYPYDIP 118


>sp|HEMA_I86A3|HEMAGGLUTININ A virus (strain A/Equine/Tennessee/5/1986

Query: 1 YESCHPAEVP 10
+ +C+P ++P
Sbjct: 109 FSNCYPYDIP 118


>sp|HEMA_I85A5|HEMAGGLUTININ A virus (strain A/Equine/Santiago/1/1985

Query: 1 YESCHPAEVP 10
+ +C+P ++P
Sbjct: 109 FSNCYPYDIP 118


>sp|HEMA_I81A2|HEMAGGLUTININ A virus (strain A/Equine/Kentucky/1/1981)

Query: 1 YESCHPAEVP 10
+ +C+P ++P
Sbjct: 109 FSNCYPYDIP 118


>sp|HEMA_I80AB|HEMAGGLUTININ A virus (strain A/Equine/Romania/1980

Query: 1 YESCHPAEVP 10
+ +C+P ++P
Sbjct: 109 FSNCYPYDIP 118


>sp|HEMA_I76AJ|HEMAGGLUTININ A virus (strain A/Equine/New

Query: 1 YESCHPAEVP 10
+ +C+P ++P
Sbjct: 109 FSNCYPYDIP 118


>sp|HEMA_I76A8|HEMAGGLUTININ A virus (strain A/Equine/Fontainebleau/1976

Query: 1 YESCHPAEVP 10
+ +C+P ++P
Sbjct: 109 FSNCYPYDIP 118


>sp|HEMA_I63A4|HEMAGGLUTININ A virus (strain A/Equine/Uruguay/1/1963

Query: 1 YESCHPAEVP 10
+ +C+P ++P
Sbjct: 109 FSNCYPYDIP 118


>sp|HEMA_I63A3|HEMAGGLUTININ A virus (strain A/Duck/Ukraine/1/1963

Query: 1 YESCHPAEVP 10
+ +C+P ++P
Sbjct: 110 FSNCYPYDIP 119


>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 94 FSNCYPYDVP 103


>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970

Query: 1 YESCHPAEVP 10
+ +C+P +VP
Sbjct: 94 FSNCYPYDVP 103


>sp|GLYC_RSVT|PUTATIVE envelope glycoprotein|Rice stripe virus (isolate T)

Query: 3 SCHPAEV 9
+CHP E+
Sbjct: 234 TCHPGEI 240


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 SCHPAEVP 10
SC P +VP
Sbjct: 1666 SCTPTQVP 1673


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 SCHPAEVP 10
SC P +VP
Sbjct: 1666 SCTPTQVP 1673


>sp|US15_HCMVM|MEMBRANE protein US15|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 YESCHPAEV 9
YE+ HP+ +
Sbjct: 100 YETSHPSNI 108


>sp|US15_HCMVA|UNCHARACTERIZED protein HVLF3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 YESCHPAEV 9
YE+ HP+ +
Sbjct: 100 YETSHPSNI 108


>sp|GAG_IPHA|INTRACISTERNAL A-particle Gag-related polyprotein|Hamster intracisternal

Query: 2 ESCHPA 7
E+CHPA
Sbjct: 86 EACHPA 91




189|SequenceR|950|941|AMQMKYESCH

>sp|GP43_BPSP1|E22 protein|Bacillus phage SP01 (Bacteriophage SP01)

Query: 5 KYESCH 10
KYE CH
Sbjct: 17 KYEQCH 22


>sp|RDRP_GVAIS|RNA replication protein|Grapevine virus A (isolate Is

Query: 1 AMQMKYESCH 10
A + KY++CH
Sbjct: 1323 ANRRKYKTCH 1332




190|SequenceR|955|946|LRLSVAMQMK

***** No hits found ******


191|SequenceR|960|951|PPPLALRLSV

>sp|S2_DPIRV|UNCHARACTERIZED protein S2|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)

Query: 2 PPLALRLSV 10
PP+ LRL V
Sbjct: 851 PPIGLRLKV 859


>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain

Query: 1 PPPLALRL 8
PP LALRL
Sbjct: 10 PPTLALRL 17


>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain

Query: 1 PPPLALRL 8
PP LALRL
Sbjct: 10 PPTLALRL 17


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 PPPLALRL 8
PPPLAL
Sbjct: 953 PPPLALEF 960


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 1 PPPLALRL 8
PPPLAL
Sbjct: 953 PPPLALEF 960


>sp|GAG_IPHA|INTRACISTERNAL A-particle Gag-related polyprotein|Hamster intracisternal

Query: 1 PPPLALRLS 9
PPP LRL+
Sbjct: 228 PPPYELRLN 236


>sp|ICP34_HHV1F|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain F)

Query: 1 PPPLALRLSV 10
PP LALRL V
Sbjct: 129 PPRLALRLRV 138


>sp|ICP34_HHV1D|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain CVG-2)

Query: 1 PPPLALRLSV 10
PP LALRL V
Sbjct: 130 PPRLALRLRV 139


>sp|ICP34_HHV11|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain 17)

Query: 1 PPPLALRLSV 10
PP LALRL V
Sbjct: 129 PPRLALRLRV 138


>sp|ICP34_HHV1N|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain MGH-10)

Query: 1 PPPLALRLSV 10
PP LALRL V
Sbjct: 123 PPRLALRLRV 132




192|SequenceR|965|956|SSNETPPPLA

>sp|PG065_MONPV|RNA-BINDING protein OPG065|Monkeypox virus (MPXV)

Query: 1 SSNETPP 7
SSN+TPP
Sbjct: 21 SSNDTPP 27


>sp|GLYC_BRSV4|MAJOR surface glycoprotein G|Bovine respiratory syncytial virus (strain

Query: 3 NETPPPLA 10
N TPPPL
Sbjct: 85 NHTPPPLT 92


>sp|GLYC_BRSV1|MAJOR surface glycoprotein G|Bovine respiratory syncytial virus (strain

Query: 3 NETPPPL 9
N TPPPL
Sbjct: 85 NHTPPPL 91


>sp|030L_IIV3|UNCHARACTERIZED protein 030L|Invertebrate iridescent virus 3 (IIV-3)

Query: 5 TPPPLA 10
TPPPLA
Sbjct: 95 TPPPLA 100




193|SequenceR|970|961|TISSLSSNET

***** No hits found ******


194|SequenceR|979|966|CYHEGPDLLTISSL

>sp|VSR_RDVF|SUPPRESSOR of RNA-mediated gene silencing|Rice dwarf virus (isolate Fujian)

Query: 1 CYHEGPDLLT 10
C HEGP +++
Sbjct: 17 CAHEGPSIIS 26


>sp|VSR_RDVA|SUPPRESSOR of RNA-mediated gene silencing|Rice dwarf virus (isolate Akita)

Query: 1 CYHEGPDLLT 10
C HEGP +++
Sbjct: 17 CAHEGPSIIS 26


>sp|VSR_RDVO|SUPPRESSOR of RNA-mediated gene silencing|Rice dwarf virus (isolate O)

Query: 1 CYHEGPDLLT 10
C HEGP +++
Sbjct: 17 CAHEGPSIIS 26


>sp|001R_FRG3G|PUTATIVE transcription factor 001R|Frog virus 3 (isolate Goorha)

Query: 4 EGPDLLTISS 13
+GPD+LT+ +
Sbjct: 222 DGPDILTVKT 231


>sp|P2A_SCPMV|POLYPROTEIN P2A|Southern cowpea mosaic virus (SCPMV)

Query: 2 YHEGPDLLTI 11
YHEG D+L +
Sbjct: 169 YHEGMDVLMV 178


>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P

Query: 1 CYHEGP 6
CYH GP
Sbjct: 344 CYHNGP 349


>sp|RDRP_SCPMV|REPLICASE polyprotein P2AB|Southern cowpea mosaic virus (SCPMV)

Query: 2 YHEGPDLLTI 11
YHEG D+L +
Sbjct: 169 YHEGMDVLMV 178


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 CYHEGPDLLTISS 13
C H GP L T ++
Sbjct: 1065 CDHRGPSLRTTTA 1077


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 CYHEGPDLLTISS 13
C H GP L T ++
Sbjct: 1065 CDHRGPSLRTTTA 1077


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 CYHEGPDLLTISS 13
C H GP L T ++
Sbjct: 1065 CDHRGPSLRTTTA 1077


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 CYHEGPDLLTISS 13
C H GP L T ++
Sbjct: 1065 CDHRGPSLRTTTA 1077


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 CYHEGPDLLTISS 13
C H GP L T ++
Sbjct: 1065 CDHRGPSLRTTTA 1077


>sp|PLP_BPSAV|O-SERYL-DTMP PLP-dependent decarboxylase|Salmonella phage ViI

Query: 1 CYHEGPDLL 9
CYH+ PD +
Sbjct: 294 CYHDNPDYV 302


>sp|CAPSD_BPP2|CAPSID proteins|Escherichia phage P2 (Bacteriophage P2)

Query: 2 YHEGPDLLTI 11
Y E PDL+ I
Sbjct: 226 YQEDPDLVVI 235


>sp|VL2_HPV28|MINOR capsid protein L2|Human papillomavirus 28

Query: 3 HEGPDLLTISS 13
H GPD++T +S
Sbjct: 410 HPGPDIITPAS 420


>sp|L_WWAVU|RNA-DIRECTED RNA polymerase L|Whitewater Arroyo mammarenavirus (isolate

Query: 3 HEGPDLL 9
+EGPDLL
Sbjct: 938 YEGPDLL 944


>sp|HCP16_BPSPP|HEAD completion protein gp16|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 2 YHEGPDLLTISS 13
Y E PD++T S
Sbjct: 2 YEEFPDVITFQS 13


>sp|RDRP_PMVK|RNA-DIRECTED RNA polymerase|Panicum mosaic virus (strain United

Query: 2 YHEGPDLLTIS 12
Y++GP L T S
Sbjct: 548 YYDGPQLTTYS 558


>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus

Query: 1 CYHEGPDLLT 10
C H GP +L+
Sbjct: 2704 CEHYGPSILS 2713


>sp|YR400_MIMIV|PUTATIVE serine/threonine-protein kinase R400|Acanthamoeba polyphaga

Query: 3 HEGPD 7
HEGPD
Sbjct: 287 HEGPD 291


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 2 YHEGPDLLTISS 13
Y+E PDL+ + +
Sbjct: 639 YNERPDLMKVKN 650


>sp|RDRP_PMV|RNA replication protein|Papaya mosaic potexvirus (PMV)

Query: 1 CYHEGPDLLTIS 12
CY +G +LTI+
Sbjct: 623 CYPKGHQVLTIN 634


>sp|CAPSF_BPPZA|CAPSID fiber protein|Bacillus phage PZA (Bacteriophage PZA)

Query: 2 YHEGPDLLTIS 12
Y EG D++ IS
Sbjct: 21 YSEGDDIIEIS 31


>sp|POLS_AURAV|STRUCTURAL polyprotein|Aura virus (AURAV)

Query: 1 CYHEGPDL 8
CY+ PDL
Sbjct: 290 CYNRNPDL 297


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 CYHEGP 6
CY EGP
Sbjct: 2068 CYTEGP 2073


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 2 YHEG-PDLLTISS 13
Y+ G PDLLTI +
Sbjct: 648 YYNGLPDLLTIRN 660


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 CYHEGP 6
CY EGP
Sbjct: 2068 CYTEGP 2073


>sp|MUNS_REOVD|PROTEIN mu-NS|Reovirus type 3 (strain Dearing)

Query: 3 HEGPDLLTIS 12
H GP L+ +S
Sbjct: 196 HRGPQLVDVS 205


>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29

Query: 3 HEGPDLLTISS 13
H GPD++ SS
Sbjct: 410 HTGPDIILPSS 420


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 2 YHEGPDLLTI 11
Y+ PDL+TI
Sbjct: 649 YNGRPDLMTI 658


>sp|FIB37_BPOX2|LONG tail fiber protein Gp37|Enterobacteria phage Ox2 (Bacteriophage

Query: 4 EGPDLLTISS 13
+G D+LTIS+
Sbjct: 203 DGSDVLTISN 212


>sp|FIB37_BPM1|LONG tail fiber protein Gp37|Enterobacteria phage M1 (Bacteriophage M1)

Query: 4 EGPDLLTISS 13
+G D+LTIS+
Sbjct: 203 DGSDVLTISN 212


>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)

Query: 3 HEGPDLLTIS 12
H GP LL++S
Sbjct: 119 HLGPSLLSLS 128




THE END