OSMR_HUMAN Blast Output
Viruses
1|Sequence|1|10|MALFAVFQTT

>sp|HEPA_PSHV1|DNA helicase/primase complex-associated protein|Psittacid herpesvirus 1

Query: 1 MALFAVF 7
MALFAVF
Sbjct: 110 MALFAVF 116


>sp|Y102_OSHVF|UNCHARACTERIZED protein ORF102|Ostreid herpesvirus 1 (isolate France)

Query: 2 ALFAVFQTT 10
ALF F+TT
Sbjct: 326 ALFRAFETT 334




2|Sequence|6|15|VFQTTFFLTL

>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate

Query: 1 VFQTTFFLTL 10
+FQ FFLTL
Sbjct: 43 LFQLIFFLTL 52


>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 VFQTTFFLTL 10
V+QTTF L++
Sbjct: 273 VWQTTFLLSV 282




3|Sequence|11|20|FFLTLLSLRT

***** No hits found ******


4|Sequence|16|25|LSLRTYQSEV

>sp|REP_BCTVC|REPLICATION-ASSOCIATED protein|Beet curly top virus (strain

Query: 1 LSLRTYQSEV 10
SLRTY EV
Sbjct: 247 FSLRTYYDEV 256


>sp|CAPSD_LDCPR|INNER capsid protein VP1|Lymantria dispar cypovirus 1 (isolate

Query: 1 LSLRTYQSE 9
+++RTYQ+E
Sbjct: 830 VAMRTYQTE 838


>sp|REP1_FBN11|PARA-REP C1|Faba bean necrotic yellows C11

Query: 1 LSLRTYQSEV 10
+SLR +QSE+
Sbjct: 147 ISLRPWQSEL 156




5|Sequence|21|30|YQSEVLAERL

>sp|TMP_BPT5|TAPE measure protein pb2 precursor|Escherichia phage T5 (Enterobacteria

Query: 2 QSEVLAERL 10
QS++L ERL
Sbjct: 842 QSQILTERL 850


>sp|REV_EIAVY|PROTEIN Rev|Equine infectious anemia virus (strain

Query: 2 QSEVLAERL 10
Q+EVL ERL
Sbjct: 87 QTEVLQERL 95


>sp|REV_EIAVC|PROTEIN Rev|Equine infectious anemia virus (isolate

Query: 2 QSEVLAERL 10
Q+EVL ERL
Sbjct: 87 QTEVLQERL 95


>sp|REV_EIAV9|PROTEIN Rev|Equine infectious anemia virus (isolate

Query: 2 QSEVLAERL 10
Q+EVL ERL
Sbjct: 87 QAEVLQERL 95




6|Sequence|26|35|LAERLPLTPV

>sp|POL_SIVVT|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 LAERLPLTPV 10
L+E++P+TPV
Sbjct: 619 LSEKIPVTPV 628


>sp|POL_SIVVG|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 LAERLPLTPV 10
L+E++P+TPV
Sbjct: 616 LSEQIPITPV 625


>sp|RPB3_ASFWA|DNA-DIRECTED RNA polymerase RPB3-11 homolog|African swine fever virus (isolate

Query: 1 LAERLPLTPV 10
L E+LPL PV
Sbjct: 32 LEEQLPLVPV 41


>sp|RPB3_ASFP4|DNA-DIRECTED RNA polymerase RPB3-11 homolog|African swine fever virus (isolate

Query: 1 LAERLPLTPV 10
L E+LPL PV
Sbjct: 32 LEEQLPLVPV 41


>sp|RPB3_ASFK5|DNA-DIRECTED RNA polymerase RPB3-11 homolog|African swine fever virus (isolate

Query: 1 LAERLPLTPV 10
L E+LPL PV
Sbjct: 32 LEEQLPLVPV 41


>sp|RPB3_ASFB7|DNA-DIRECTED RNA polymerase RPB3-11 homolog|African swine fever virus (strain

Query: 1 LAERLPLTPV 10
L E+LPL PV
Sbjct: 32 LEEQLPLVPV 41


>sp|RPB3_ASFM2|DNA-DIRECTED RNA polymerase RPB3-11 homolog|African swine fever virus (isolate

Query: 1 LAERLPLTPV 10
L E+LPL PV
Sbjct: 32 LEEQLPLVPV 41


>sp|POL1_TOTV|RNA1 polyprotein|Tomato torrado virus (isolate Solanum

Query: 1 LAERLPLT 8
LA+RLP T
Sbjct: 1858 LAQRLPFT 1865


>sp|YR895_MIMIV|UNCHARACTERIZED protein R895|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LAERLPLTPV 10
+++LP+TP+
Sbjct: 17 FSKQLPITPI 26


>sp|RDRP_IPNVJ|RNA-DIRECTED RNA polymerase|Infectious pancreatic necrosis virus (strain

Query: 1 LAERLPLTPV 10
+E++PLTP
Sbjct: 821 FSEKIPLTPT 830


>sp|RDRP_IPNVS|RNA-DIRECTED RNA polymerase|Infectious pancreatic necrosis virus (strain

Query: 1 LAERLPLTPV 10
+E++PLTP
Sbjct: 821 FSEKIPLTPT 830


>sp|POL_SIVV1|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 LAERLPLTPV 10
L++ +P+TPV
Sbjct: 615 LSQTIPITPV 624




7|Sequence|31|40|PLTPVSLKVS

>sp|POL_SIVVG|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 PLTPVSLK 8
P+TPV LK
Sbjct: 621 PITPVKLK 628


>sp|POL_SIVVT|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 PLTPVSLK 8
P+TPV LK
Sbjct: 624 PVTPVKLK 631




8|Sequence|36|45|SLKVSTNSTR

***** No hits found ******


9|Sequence|41|50|TNSTRQSLHL

>sp|YL887_MIMIV|PUTATIVE JmjC domain-containing protein L887|Acanthamoeba polyphaga

Query: 1 TNSTRQSLH 9
TNST+QSL+
Sbjct: 29 TNSTKQSLN 37


>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 TNSTRQSLHL 10
+N+TR+S+H+
Sbjct: 298 SNNTRKSIHI 307


>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 TNSTRQSLHL 10
+N+TR+S+H+
Sbjct: 308 SNNTRKSIHI 317


>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 NSTRQSLHL 10
N+TR+S+H+
Sbjct: 303 NNTRKSIHM 311


>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 NSTRQSLHL 10
N+TR+S+H+
Sbjct: 302 NNTRRSIHI 310


>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 NSTRQSLHL 10
N+TR S+HL
Sbjct: 294 NNTRTSIHL 302


>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 NSTRQSLHL 10
N+TR+ +HL
Sbjct: 292 NNTRKGIHL 300




10|Sequence|46|55|QSLHLQWTVH

>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3148 MHLQWIV 3154


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3168 MHLQWIV 3174


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3198 MHLQWIV 3204


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3148 MHLQWIV 3154


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3168 MHLQWIV 3174


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3198 MHLQWIV 3204


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3200 MHLQWLV 3206


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3197 MHLQWLV 3203


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3143 MHLQWLV 3149


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3110 MHLQWLV 3116


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3110 MHLQWLV 3116


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3110 MHLQWLV 3116


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3110 MHLQWLV 3116


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3110 MHLQWLV 3116


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3200 MHLQWLV 3206


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3197 MHLQWLV 3203


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3143 MHLQWLV 3149


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3110 MHLQWLV 3116


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3110 MHLQWLV 3116


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3110 MHLQWLV 3116


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3110 MHLQWLV 3116


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 3 LHLQWTV 9
+HLQW V
Sbjct: 3110 MHLQWLV 3116


>sp|YR821_MIMIV|UNCHARACTERIZED protein R821|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 SLHLQWTV 9
+LHL+W V
Sbjct: 365 NLHLKWYV 372


>sp|REP_SLCV|REPLICATION-ASSOCIATED protein|Squash leaf curl virus (SLCV)

Query: 3 LHLQWTV 9
LHL W+V
Sbjct: 34 LHLSWSV 40


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 QSLHLQWTV 9
+ LHL W V
Sbjct: 5485 RELHLSWEV 5493


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 QSLHLQWTV 9
+ LHL W V
Sbjct: 5462 RELHLSWEV 5470


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 QSLHLQWTV 9
+ LHL W V
Sbjct: 5460 RELHLSWEV 5468


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 QSLHLQWTV 9
+ LHL W V
Sbjct: 5468 RELHLSWEV 5476


>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)

Query: 2 SLHLQWTVH 10
++HLQ+ +H
Sbjct: 360 AMHLQYKIH 368


>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 SLHLQWTVH 10
++HLQ+ +H
Sbjct: 360 AMHLQYKIH 368


>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40

Query: 3 LHLQWT 8
LH QWT
Sbjct: 263 LHTQWT 268


>sp|L_MPV15|RNA-DIRECTED RNA polymerase L|Murine pneumonia virus (strain 15)

Query: 3 LHLQWT 8
LHL WT
Sbjct: 1797 LHLHWT 1802




11|Sequence|51|60|QWTVHNLPYH

>sp|YL533_MIMIV|UNCHARACTERIZED protein L533|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 QWTVHNLP 8
QW +H +P
Sbjct: 311 QWNIHKMP 318


>sp|RDRP_SBWMN|REPLICASE large subunit|Soil-borne wheat mosaic virus (strain

Query: 3 TVHNLPYH 10
+VH +PYH
Sbjct: 1202 SVHCVPYH 1209


>sp|VP3_FDVS|PUTATIVE structural protein VP3|Fiji disease virus (isolate Sugarcane)

Query: 4 VHNLPYH 10
+HNL YH
Sbjct: 589 IHNLNYH 595


>sp|LT_SV40|LARGE T antigen|Simian virus 40 (SV40)

Query: 5 HNLPYH 10
HN PYH
Sbjct: 683 HNQPYH 688


>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)

Query: 2 WTVHNLPY 9
WT+ +PY
Sbjct: 747 WTISTIPY 754


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 2 WTVHNLPY 9
WT+ +PY
Sbjct: 747 WTISTIPY 754


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 2 WTVHNLPY 9
WT+ +PY
Sbjct: 747 WTISTIPY 754


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 2 WTVHNLPY 9
WT+ +PY
Sbjct: 747 WTISTIPY 754


>sp|L_CDVO|RNA-DIRECTED RNA polymerase L|Canine distemper virus (strain Onderstepoort)

Query: 2 WTVHNLPY 9
WT+ +PY
Sbjct: 747 WTISTIPY 754


>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)

Query: 1 QWTVHN 6
QW++HN
Sbjct: 222 QWSLHN 227


>sp|DPOL_HIS1I|DNA polymerase|His1 virus (isolate Australia/Victoria) (His1V)

Query: 1 QWTVHN 6
+WT+HN
Sbjct: 227 KWTIHN 232


>sp|TUB11_BPB03|PROXIMAL tail tube connector protein|Bacillus phage B103 (Bacteriophage

Query: 2 WTVHNLPY 9
W + N+PY
Sbjct: 79 WLIINMPY 86


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1 QWTVHNLPY 9
QW +H +P+
Sbjct: 2096 QWFLHFVPF 2104


>sp|YL060_MIMIV|PUTATIVE F-box and FNIP repeat-containing|Acanthamoeba polyphaga mimivirus

Query: 4 VHNLPYH 10
VHNLP++
Sbjct: 53 VHNLPFY 59


>sp|PB2_QRFVE|POLYMERASE basic protein 2|Quaranfil virus (isolate

Query: 2 WTVHNLP 8
W VH+LP
Sbjct: 261 WMVHHLP 267


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1 QWTVHNLPY 9
QW +H +P+
Sbjct: 2096 QWFLHFVPF 2104


>sp|PORTL_BPKMV|PORTAL protein|Pseudomonas phage phiKMV

Query: 1 QWTVHNLPY 9
+W +H PY
Sbjct: 231 RWPIHLCPY 239


>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 1 QWTVHNLPY 9
+WT+ PY
Sbjct: 2698 KWTIEQEPY 2706


>sp|CAPS2_AFV1Y|MAJOR capsid protein 2|Acidianus filamentous virus 1 (isolate

Query: 1 QWTVHNLPYH 10
QW PYH
Sbjct: 43 QWEAGFTPYH 52


>sp|YR889_MIMIV|UNCHARACTERIZED protein R889|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 QWTVHN 6
QW +HN
Sbjct: 75 QWEIHN 80


>sp|DPOL_ADECC|DNA polymerase|Canine adenovirus serotype 1 (strain

Query: 3 TVHNLP 8
TVHNLP
Sbjct: 113 TVHNLP 118


>sp|VP2_POVHA|MINOR capsid protein VP2|Hamster polyomavirus (HaPyV) (Mesocricetus

Query: 1 QWTVHNLP 8
+W V NLP
Sbjct: 207 RWVVTNLP 214


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 1 QWTVHN 6
+W VHN
Sbjct: 3228 EWAVHN 3233


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 1 QWTVHN 6
+W VHN
Sbjct: 3228 EWAVHN 3233


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 WTVHNLPYH 10
W +H LP++
Sbjct: 2165 WLLHLLPFN 2173


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 WTVHNLPYH 10
W +H LP++
Sbjct: 2165 WLLHLLPFN 2173


>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)

Query: 2 WTVHNLPYH 10
WTVH+ Y+
Sbjct: 805 WTVHHKIYY 813


>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)

Query: 2 WTVHNLPYH 10
WTVH+ Y+
Sbjct: 805 WTVHHKIYY 813


>sp|KBTB1_ECTVM|KELCH repeat and BTB domain-containing|Ectromelia virus (strain Moscow)

Query: 2 WTVHNLPY 9
W+VHN Y
Sbjct: 488 WSVHNKLY 495


>sp|BET_SFVCP|PROTEIN Bet|Simian foamy virus (isolate chimpanzee)

Query: 1 QWTVHNLPY 9
+WT LPY
Sbjct: 421 RWTTRALPY 429


>sp|KBTB1_CAMPS|KELCH repeat and BTB domain-containing|Camelpox virus (strain CMS)

Query: 2 WTVHNLPY 9
W+VHN Y
Sbjct: 488 WSVHNKLY 495


>sp|MATA_BPPP7|MATURATION protein A|Pseudomonas phage PP7 (Bacteriophage PP7)

Query: 4 VHNLPY 9
VH+LPY
Sbjct: 50 VHSLPY 55


>sp|GGAG_FSVMD|GLYCO-GAG protein|Feline sarcoma virus (strain McDonough)

Query: 2 WTVHNLPY 9
W +HN P+
Sbjct: 297 WKLHNPPF 304




12|Sequence|56|65|NLPYHQELKM

>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)

Query: 3 PYHQELKM 10
PYHQ++++
Sbjct: 126 PYHQQIRL 133


>sp|Y440_SIRV1|UNCHARACTERIZED protein 440|Sulfolobus islandicus rod-shaped virus 1

Query: 1 NLPYHQELK 9
NLPY+ E+K
Sbjct: 64 NLPYYNEIK 72


>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human

Query: 3 PYHQELKM 10
PYHQ++++
Sbjct: 126 PYHQQIRL 133


>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)

Query: 3 PYHQELKM 10
PYHQ +++
Sbjct: 122 PYHQRVRL 129


>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)

Query: 3 PYHQELKM 10
PYHQ +++
Sbjct: 122 PYHQRVRL 129


>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)

Query: 3 PYHQELKM 10
PYHQ +++
Sbjct: 122 PYHQRVRL 129


>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)

Query: 3 PYHQELK 9
PYHQ L+
Sbjct: 2039 PYHQALQ 2045


>sp|L_SENDZ|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Z) (SeV)

Query: 3 PYHQELK 9
PYHQ L+
Sbjct: 2039 PYHQALQ 2045


>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)

Query: 3 PYHQELK 9
PYHQ L+
Sbjct: 2039 PYHQALQ 2045


>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)

Query: 3 PYHQELK 9
PYHQ L+
Sbjct: 2039 PYHQALQ 2045


>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)

Query: 3 PYHQELK 9
PYHQ L+
Sbjct: 2039 PYHQALQ 2045


>sp|PTPH_MIMIV|PUTATIVE tyrosine-protein phosphatase R622|Acanthamoeba polyphaga mimivirus

Query: 1 NLPYHQELK 9
N+PY Q +K
Sbjct: 155 NIPYSQAIK 163




13|Sequence|61|70|QELKMVFQIQ

***** No hits found ******


14|Sequence|66|75|VFQIQISRIE

***** No hits found ******


15|Sequence|71|80|ISRIETSNVI

***** No hits found ******


16|Sequence|76|85|TSNVIWVGNY

>sp|VE6_PCPV1|PROTEIN E6|Pygmy chimpanzee papillomavirus type 1

Query: 3 NVIWVGNY 10
N++W GN+
Sbjct: 52 NIVWQGNF 59


>sp|GLYCO_IHNVR|GLYCOPROTEIN hematopoietic necrosis virus (strain

Query: 2 SNVIWVGN 9
SNV+W+G+
Sbjct: 200 SNVVWMGD 207


>sp|GLYCO_IHNVO|GLYCOPROTEIN hematopoietic necrosis virus (strain

Query: 2 SNVIWVGN 9
SNV+W+G+
Sbjct: 200 SNVVWMGD 207


>sp|GLYCO_IHNVW|GLYCOPROTEIN hematopoietic necrosis virus (strain

Query: 2 SNVIWVGN 9
SNV+W+G+
Sbjct: 200 SNVVWMGD 207


>sp|GP13_BPT7|PROBABLE scaffold protein gp13|Escherichia phage T7 (Bacteriophage T7)

Query: 3 NVIWVGN 9
N +WVGN
Sbjct: 99 NYVWVGN 105


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 1 TSNVIWVG 8
TSN++W G
Sbjct: 497 TSNLVWQG 504


>sp|GLYCO_HIRRV|GLYCOPROTEIN rhabdovirus (strain Korea/CA 9703/1997)

Query: 2 SNVIWVGN 9
SNV+W G+
Sbjct: 200 SNVVWKGD 207


>sp|CAPSD_EPMV|CAPSID protein|Eggplant mosaic virus

Query: 1 TSNVIWVGN 9
T N++WV +
Sbjct: 91 TVNIVWVSD 99


>sp|VEAA_BPP22|EAA protein|Salmonella phage P22 (Bacteriophage P22)

Query: 5 IWVGNY 10
IW+ NY
Sbjct: 222 IWINNY 227


>sp|POL1_BPMV|RNA1 polyprotein|Bean-pod mottle virus (strain Kentucky

Query: 2 SNVIWVG 8
SNV+WV
Sbjct: 1590 SNVLWVA 1596




17|Sequence|81|90|WVGNYSTTVK

>sp|VEAA_BPP22|EAA protein|Salmonella phage P22 (Bacteriophage P22)

Query: 1 WVGNYSTT 8
W+ NYS T
Sbjct: 223 WINNYSGT 230


>sp|P2_BPPRD|ADSORPTION protein P2|Enterobacteria phage PRD1 (Bacteriophage PRD1)

Query: 2 VGNYSTTV 9
+GNY+TT+
Sbjct: 343 IGNYTTTL 350


>sp|TUBE1_BPK34|TAIL tubular protein A|Klebsiella phage KP34 (Bacteriophage KP34)

Query: 1 WVGNYST 7
WV NY+T
Sbjct: 124 WVANYTT 130


>sp|YR096_MIMIV|PUTATIVE ankyrin repeat protein R96|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WVGNYSTTV 9
W+ +YST +
Sbjct: 915 WIKSYSTNI 923


>sp|DPO26_BPK64|DEPOLYMERASE, capsule K30/K69-specific|Klebsiella phage K64-1 (Bacteriophage

Query: 2 VGNYSTTV 9
VGNYS++V
Sbjct: 684 VGNYSSSV 691


>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)

Query: 1 WVGNYSTTV 9
W GNY T +
Sbjct: 342 WTGNYFTDI 350




18|Sequence|86|95|STTVKWNQVL

>sp|TUBE_BPSPP|TAIL tube protein gp17.1*|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 1 STTVKWNQV 9
S TVKW+ V
Sbjct: 191 SVTVKWDAV 199


>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate

Query: 5 KWNQVL 10
KWN++L
Sbjct: 46 KWNEIL 51


>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain

Query: 5 KWNQVL 10
KWN++L
Sbjct: 46 KWNEIL 51




19|Sequence|91|100|WNQVLHWSWE

>sp|VP2_BTV11|OUTER capsid protein VP2|Bluetongue virus 11 (isolate USA)

Query: 2 NQVLHWSWE 10
+QV+HW +E
Sbjct: 421 DQVVHWKYE 429


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 1 WNQVLHW 7
WN + HW
Sbjct: 1497 WNSIAHW 1503


>sp|VP2_BTV17|OUTER capsid protein VP2|Bluetongue virus 17 (isolate USA)

Query: 2 NQVLHWSWE 10
+Q++HW +E
Sbjct: 421 DQIIHWRYE 429


>sp|FIB12_BPPZA|PRENECK appendage protein|Bacillus phage PZA (Bacteriophage PZA)

Query: 1 WNQVLHW 7
WN+V+ W
Sbjct: 60 WNKVMEW 66


>sp|FIB12_BPPH2|PRE-NECK appendage protein|Bacillus phage phi29 (Bacteriophage phi-29)

Query: 1 WNQVLHW 7
WN+V+ W
Sbjct: 60 WNKVMEW 66


>sp|FIB12_BPB03|PRE-NECK appendage protein|Bacillus phage B103 (Bacteriophage B103)

Query: 1 WNQVLHW 7
WN+V+ W
Sbjct: 59 WNKVMEW 65


>sp|YL099_MIMIV|PUTATIVE ankyrin repeat protein L99|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 NQVLHWSWE 10
N VLH WE
Sbjct: 148 NSVLHHKWE 156


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 2 NQVLHWS 8
N++LHWS
Sbjct: 1437 NKLLHWS 1443


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 NQVLHWS 8
N++LHWS
Sbjct: 1437 NKLLHWS 1443


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 WNQVLHW 7
WN+V++W
Sbjct: 4111 WNKVVNW 4117


Query: 1 WNQVLHWS 8
+ ++LHWS
Sbjct: 1478 YKKLLHWS 1485


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 WNQVLHW 7
WN+V++W
Sbjct: 4118 WNKVVNW 4124


Query: 1 WNQVLHWS 8
+ ++LHWS
Sbjct: 1485 YKKLLHWS 1492


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 WNQVLHW 7
WN+V++W
Sbjct: 4111 WNKVVNW 4117


Query: 1 WNQVLHWS 8
+ ++LHWS
Sbjct: 1478 YKKLLHWS 1485


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 WNQVLHW 7
WN+V++W
Sbjct: 4118 WNKVVNW 4124


Query: 1 WNQVLHWS 8
+ ++LHWS
Sbjct: 1485 YKKLLHWS 1492


>sp|1A_OLV2I|REPLICATION protein 1a|Olive latent virus 2 (isolate

Query: 2 NQVLHWSWE 10
N LHW W+
Sbjct: 104 NWFLHWQWQ 112


>sp|DPOL_ASFWA|DNA polymerase beta|African swine fever virus (isolate

Query: 1 WNQVLHWSWE 10
W Q+ H+S+E
Sbjct: 165 WIQLQHYSYE 174


>sp|DPOL_ASFP4|DNA polymerase beta|African swine fever virus (isolate

Query: 1 WNQVLHWSWE 10
W Q+ H+S+E
Sbjct: 165 WIQLQHYSYE 174


>sp|DPOL_ASFL6|DNA polymerase beta|African swine fever virus (isolate

Query: 1 WNQVLHWSWE 10
W Q+ H+S+E
Sbjct: 165 WIQLQHYSYE 174


>sp|DPOL_ASFK5|DNA polymerase beta|African swine fever virus (isolate

Query: 1 WNQVLHWSWE 10
W Q+ H+S+E
Sbjct: 165 WIQLQHYSYE 174


>sp|DPOL_ASFB7|DNA polymerase beta|African swine fever virus (strain

Query: 1 WNQVLHWSWE 10
W Q+ H+S+E
Sbjct: 169 WIQLQHYSYE 178


>sp|1A_CMVQ|REPLICATION protein 1a|Cucumber mosaic virus (strain Q)

Query: 1 WNQVLHWSW 9
WN W W
Sbjct: 444 WNASFIWKW 452


>sp|CAPSD_BPKO2|MAJOR capsid protein|Klebsiella oxytoca phage phiKO2 (Bacteriophage

Query: 1 WNQVLHWS 8
WN++L W+
Sbjct: 266 WNRLLPWA 273


>sp|VP2_BTV13|OUTER capsid protein VP2|Bluetongue virus 13 (isolate USA)

Query: 3 QVLHWSWE 10
+VLHW +E
Sbjct: 423 KVLHWEYE 430


>sp|ORFC2_GOCV|UNCHARACTERIZED protein ORFC2|Goose circovirus (GoCV)

Query: 1 WNQVLHW 7
WN +LH+
Sbjct: 25 WNNILHY 31


>sp|VP2_BTV10|OUTER capsid protein VP2|Bluetongue virus 10 (isolate USA)

Query: 2 NQVLHWSWE 10
++++HW +E
Sbjct: 421 DEIIHWRYE 429


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 WNQVLHWS 8
WN +++WS
Sbjct: 320 WNMMMNWS 327


>sp|VF380_IIV3|PROBABLE serine/threonine-protein kinase 010L|Invertebrate iridescent virus

Query: 1 WNQVLHWSW 9
WN+ W+W
Sbjct: 424 WNRARTWTW 432


>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 1 WNQVLHWSWE 10
W++ HW WE
Sbjct: 2240 WDK--HWFWE 2247


>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)

Query: 1 WNQVLHWSWE 10
W++ HW WE
Sbjct: 2240 WDK--HWFWE 2247


>sp|NRAM_I72A0|NEURAMINIDASE A virus (strain A/Equine/Algiers/1972

Query: 2 NQVLHWSW 9
N+V +WSW
Sbjct: 450 NKVANWSW 457


>sp|VP2_BTV3V|OUTER capsid protein VP2|Bluetongue virus 3 (isolate South

Query: 3 QVLHWSWE 10
+V+HW +E
Sbjct: 423 KVIHWEYE 430


>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 6 HWSWE 10
HW W+
Sbjct: 280 HWRWD 284


>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 6 HWSWE 10
HW W+
Sbjct: 280 HWRWD 284


>sp|POLG_BVY3|GENOME polyprotein|Blackberry virus Y (isolate Blackberry

Query: 4 VLHWSW 9
+L WSW
Sbjct: 695 ILPWSW 700


>sp|YL100_MIMIV|PUTATIVE ankyrin repeat protein L100|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 NQVLHWSWE 10
N ++HW+++
Sbjct: 119 NYIIHWAFK 127


>sp|RDRP_CRSVL|RNA-DIRECTED RNA polymerase|Carnation ringspot virus (isolate Lommel)

Query: 1 WNQVLHWSW 9
WN W W
Sbjct: 38 WNNFRKWFW 46


>sp|Y05D_BPT4|UNCHARACTERIZED 20.7 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 NQVLHWS 8
N+ LHWS
Sbjct: 68 NRTLHWS 74


>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 WNQVLHWSWE 10
WN +L+WS E
Sbjct: 793 WNLLLYWSQE 802


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 1 WNQVLHWS 8
W+ +L+WS
Sbjct: 320 WDMMLNWS 327


>sp|HEPA_GAHVM|DNA helicase/primase complex-associated protein|Gallid herpesvirus 2

Query: 1 WNQVLHWSW 9
WN +W W
Sbjct: 582 WNANCYWLW 590


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 WNQVLHWS 8
W+ +L+WS
Sbjct: 320 WDMMLNWS 327


>sp|P30_ASFM2|PHOSPHOPROTEIN p30|African swine fever virus (isolate

Query: 1 WNQVLHWSWE 10
WN +LH +E
Sbjct: 83 WNMILHVLFE 92


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 2 NQVLHWSW 9
N L WSW
Sbjct: 2046 NVYLSWSW 2053


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 2 NQVLHWSW 9
N L WSW
Sbjct: 2046 NVYLSWSW 2053


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 2 NQVLHWSW 9
N L WSW
Sbjct: 2046 NVYLSWSW 2053




20|Sequence|96|105|HWSWESELPL

>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2

Query: 2 WSWES 6
WSWES
Sbjct: 557 WSWES 561


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 2 WSWESELPL 10
W +E+E PL
Sbjct: 6227 WDYEAERPL 6235


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2 WSWESELPL 10
W +E+E PL
Sbjct: 6196 WDYEAERPL 6204


>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 HWSWESE 7
HW W+ E
Sbjct: 280 HWRWDGE 286


>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 HWSWESE 7
HW W+ E
Sbjct: 280 HWRWDGE 286


>sp|P49_ASFM2|MINOR capsid protein p49|African swine fever virus (isolate

Query: 4 WESELP 9
WES+LP
Sbjct: 20 WESDLP 25


>sp|P49_ASFK5|MINOR capsid protein p49|African swine fever virus (isolate

Query: 4 WESELP 9
WES+LP
Sbjct: 20 WESDLP 25


>sp|P49_ASFWA|MINOR capsid protein p49|African swine fever virus (isolate

Query: 4 WESELP 9
WES+LP
Sbjct: 20 WESDLP 25


>sp|P49_ASFP4|MINOR capsid protein p49|African swine fever virus (isolate

Query: 4 WESELP 9
WES+LP
Sbjct: 20 WESDLP 25


>sp|P49_ASFB7|MINOR capsid protein p49|African swine fever virus (strain

Query: 4 WESELP 9
WES+LP
Sbjct: 20 WESDLP 25


>sp|POL2_TORVR|RNA2 polyprotein|Tomato ringspot virus (isolate raspberry)

Query: 2 WSWESELPL 10
+SW S LPL
Sbjct: 606 FSWSSPLPL 614


Query: 2 WSWESELPL 10
+SW S LPL
Sbjct: 659 FSWSSPLPL 667


Query: 3 SWESELPL 10
SW S LPL
Sbjct: 554 SWSSPLPL 561


>sp|LTP_SHV21|LARGE tegument protein deneddylase|Saimiriine herpesvirus 2 (strain 11)

Query: 2 WSWESELPL 10
W W LPL
Sbjct: 1584 WIWTETLPL 1592


>sp|TEG7_PSHV1|TEGUMENT protein UL51|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 WSWESELPL 10
W W +P+
Sbjct: 16 WIWRQRMPM 24


>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 1 HWSWE 5
HW WE
Sbjct: 2243 HWFWE 2247


>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)

Query: 1 HWSWE 5
HW WE
Sbjct: 2243 HWFWE 2247


>sp|VG01_ICHVA|UNCHARACTERIZED protein ORF1|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 WSWESELPL 10
+SW E+PL
Sbjct: 582 FSWIGEIPL 590


>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)

Query: 2 WSWESE 7
WSWE +
Sbjct: 80 WSWEKK 85


>sp|YR083_MIMIV|UNCHARACTERIZED protein R83|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 WESELPL 10
WESE P+
Sbjct: 47 WESECPI 53


>sp|DNB2_ADECR|DNA-BINDING protein|Canine adenovirus serotype 1 (strain

Query: 3 SWESELPL 10
+W S LPL
Sbjct: 328 NWNSSLPL 335


>sp|DNB2_ADECC|DNA-BINDING protein|Canine adenovirus serotype 1 (strain

Query: 3 SWESELPL 10
+W S LPL
Sbjct: 328 NWNSSLPL 335


>sp|CAPSD_TTVI1|CAPSID protein|Torque teno sus virus 1

Query: 2 WSWESELP 9
WSW++ +P
Sbjct: 419 WSWKATIP 426




21|Sequence|101|110|SELPLECATH

>sp|DPOL_BPAPS|PROBABLE DNA polymerase|Acyrthosiphon pisum secondary endosymbiont phage

Query: 1 SELPLECATH 10
S++P+ C TH
Sbjct: 13 SDIPINCGTH 22


>sp|KITH_EHV1B|THYMIDINE kinase|Equine herpesvirus 1 (strain Ab4p)

Query: 2 ELPLECATH 10
ELPL C T+
Sbjct: 237 ELPLSCETY 245


>sp|KITH_EHV1|THYMIDINE kinase|Equine herpesvirus 1 (strain HVS25A)

Query: 2 ELPLECATH 10
ELPL C T+
Sbjct: 237 ELPLSCETY 245


>sp|YL242_MIMIV|UNCHARACTERIZED protein L242|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 ELPLECATH 10
EL L C TH
Sbjct: 93 ELELACETH 101


>sp|ICP27_PSHV1|MRNA export factor|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 SELPLECAT 9
SELPL+ AT
Sbjct: 541 SELPLQSAT 549


>sp|Y220_ATV|UNCHARACTERIZED protein ORF220|Acidianus two-tailed virus (ATV)

Query: 1 SELPLEC 7
SELP++C
Sbjct: 191 SELPVQC 197




22|Sequence|106|115|ECATHFVRIK

>sp|VF349_IIV6|PUTATIVE transcription elongation factor S-II-like|Invertebrate iridescent

Query: 1 ECATHFVRIK 10
EC HF+++K
Sbjct: 42 ECVQHFIQMK 51


>sp|HMUDK_BPW14|5-HMDU DNA kinase|Delftia phage PhiW-14 (Deftia acidovorans

Query: 1 ECATHFV 7
+C THFV
Sbjct: 53 DCGTHFV 59


>sp|VP61_MRDV|PROBABLE non-structural 41.0 kDa protein|Maize rough dwarf virus (MRDV)

Query: 2 CATHFVRIK 10
C H++R+K
Sbjct: 211 CLDHYIRMK 219


>sp|YR641_MIMIV|UNCHARACTERIZED protein R641|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 CATHFVRIK 10
C +FVRIK
Sbjct: 171 CGYYFVRIK 179


>sp|Y031_OSHVF|UNCHARACTERIZED protein ORF31|Ostreid herpesvirus 1 (isolate France)

Query: 1 ECATHFVRIK 10
EC H+ ++K
Sbjct: 107 ECINHYNKVK 116




23|Sequence|111|120|FVRIKSLVDD

***** No hits found ******


24|Sequence|116|125|SLVDDAKFPE

>sp|L_LBVAV|RNA-DIRECTED RNA polymerase L|Lettuce big-vein associated virus (isolate

Query: 2 LVDDAKFP 9
LVDD KFP
Sbjct: 1126 LVDDGKFP 1133


>sp|LTP_EHV2|LARGE tegument protein deneddylase|Equine herpesvirus 2 (strain 86/87)

Query: 1 SLVDDAKFPE 10
S +DD FPE
Sbjct: 1522 SAIDDGAFPE 1531


>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)

Query: 2 LVDDAKFPE 10
L+DD FPE
Sbjct: 212 LLDDTFFPE 220


>sp|SCAF_EHV1V|CAPSID scaffolding protein|Equine herpesvirus 1 (strain V592)

Query: 1 SLVDDAKFP 9
S+VDDA+ P
Sbjct: 66 SIVDDARGP 74


>sp|SCAF_EHV1B|CAPSID scaffolding protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 SLVDDAKFP 9
S+VDDA+ P
Sbjct: 66 SIVDDARGP 74




25|Sequence|121|130|AKFPEPNFWS

>sp|PG108_MONPV|ENVELOPE protein OPG108|Monkeypox virus (MPXV)

Query: 5 EPNFWS 10
+PNFWS
Sbjct: 253 KPNFWS 258


>sp|PG108_VACCW|ENVELOPE protein OPG108|Vaccinia virus (strain Western Reserve)

Query: 5 EPNFWS 10
+PNFWS
Sbjct: 253 KPNFWS 258


>sp|MVP_CERV|MOVEMENT protein|Carnation etched ring virus (CERV)

Query: 4 PEPNFWS 10
PEPN W+
Sbjct: 256 PEPNSWA 262


>sp|PG108_VAR67|ENVELOPE protein H3|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 5 EPNFWS 10
+PNFWS
Sbjct: 254 KPNFWS 259


>sp|VP1_AQRVA|OUTER capsid protein VP1|Aquareovirus A (isolate Chum

Query: 3 FPEPNFWS 10
FP P FW+
Sbjct: 621 FPTPAFWT 628


>sp|VGH_BPS13|MINOR spike protein|Enterobacteria phage S13 (Bacteriophage S13)

Query: 1 AKFPEPNFW 9
A FPE N W
Sbjct: 123 AAFPELNAW 131


>sp|H_BPPHS|MINOR spike protein H|Enterobacteria phage phiX174 (Isolate Sanger)

Query: 1 AKFPEPNFW 9
A FPE N W
Sbjct: 123 AAFPELNAW 131


>sp|P8_WTV|OUTER capsid protein P8|Wound tumor virus (WTV)

Query: 6 PNFWS 10
PNFWS
Sbjct: 214 PNFWS 218


>sp|PG108_VACCC|ENVELOPE protein H3|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5 EPNFWS 10
+PNFWS
Sbjct: 253 KPNFWS 258


>sp|VGH_BPPHK|MINOR spike protein|Enterobacteria phage phiK (Bacteriophage phi-K)

Query: 1 AKFPEPNFW 9
A FPE N W
Sbjct: 135 AAFPELNPW 143


>sp|VGH_BPG4|MINOR spike protein|Escherichia phage G4 (Bacteriophage G4)

Query: 1 AKFPEPNFW 9
A FPE N W
Sbjct: 118 AAFPELNPW 126


>sp|VGH_BPAL3|MINOR spike protein|Escherichia phage alpha3 (Bacteriophage alpha-3)

Query: 1 AKFPEPNFW 9
A FPE N W
Sbjct: 133 AAFPELNPW 141


>sp|L_CPXVB|RNA-DIRECTED RNA polymerase L|Cupixi mammarenavirus (isolate Rat/Brasil/BeAn

Query: 5 EPNFWS 10
EP+FW+
Sbjct: 426 EPSFWT 431


>sp|NRDG_BPT4|ANAEROBIC ribonucleoside-triphosphate reductase-activating

Query: 1 AKFPEPNFW 9
A+FPE + W
Sbjct: 92 ARFPEKDIW 100


>sp|SPEA_BPT12|EXOTOXIN type A|Streptococcus pyogenes phage T12 (Bacteriophage

Query: 3 FPEPNF 8
FPEP F
Sbjct: 217 FPEPEF 222


>sp|GLYCO_TIBVC|GLYCOPROTEIN virus (strain CS132) (TIBV)

Query: 2 KFPEPN 7
K+PEPN
Sbjct: 409 KYPEPN 414


>sp|RPB1_FRG3G|PUTATIVE DNA-directed RNA polymerase 008R|Frog virus 3 (isolate Goorha)

Query: 2 KFPEPNF 8
KFP P+F
Sbjct: 1066 KFPPPHF 1072


>sp|DPOZ_BPSHA|DNA polymerase DpoZ|Acinetobacter phage SH-Ab 15497

Query: 4 PEPNFW 9
P PN+W
Sbjct: 609 PAPNWW 614


>sp|VL1_BPV3|MAJOR capsid protein L1|Bovine papillomavirus type 3

Query: 2 KFPEPNFWS 10
KFP+PN +S
Sbjct: 75 KFPDPNKFS 83


>sp|VL1_BPV4|MAJOR capsid protein L1|Bos taurus papillomavirus 4 (Bovine

Query: 2 KFPEPNFWS 10
KFP+PN +S
Sbjct: 75 KFPDPNKFS 83


>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain JI)

Query: 3 FPEPNF 8
FP PNF
Sbjct: 254 FPSPNF 259


>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)

Query: 4 PEPNFWS 10
P P++WS
Sbjct: 70 PTPHYWS 76


>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)

Query: 4 PEPNFWS 10
P P++WS
Sbjct: 70 PTPHYWS 76


>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)

Query: 4 PEPNFWS 10
P P++WS
Sbjct: 70 PTPHYWS 76


>sp|DPOL_ADEB3|DNA polymerase|Bovine adenovirus B serotype 3

Query: 3 FPEPNFWS 10
FP+ ++WS
Sbjct: 504 FPQRDYWS 511




26|Sequence|126|135|PNFWSNWSSW

>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 PNFWSNWSSW 10
P+F ++W SW
Sbjct: 1342 PHFNTSWMSW 1351


>sp|VSR_RGDV|SUPPRESSOR of RNA-mediated gene silencing|Rice gall dwarf virus (RGDV)

Query: 3 FWSNWSS 9
FW WSS
Sbjct: 275 FWRGWSS 281


>sp|PG108_MONPV|ENVELOPE protein OPG108|Monkeypox virus (MPXV)

Query: 1 PNFWS 5
PNFWS
Sbjct: 254 PNFWS 258


>sp|FIB31_BPHC1|PROBABLE tail fiber protein|Haemophilus phage HP1 (strain HP1c1)

Query: 5 SNWSSW 10
SNWS W
Sbjct: 522 SNWSEW 527


>sp|PG108_VACCW|ENVELOPE protein OPG108|Vaccinia virus (strain Western Reserve)

Query: 1 PNFWS 5
PNFWS
Sbjct: 254 PNFWS 258


>sp|PG108_VAR67|ENVELOPE protein H3|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 PNFWS 5
PNFWS
Sbjct: 255 PNFWS 259


>sp|PG108_VACCC|ENVELOPE protein H3|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 PNFWS 5
PNFWS
Sbjct: 254 PNFWS 258


>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 2 NFWSNWSSW 10
N+W+ W W
Sbjct: 643 NWWTGWRQW 651


>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2 NFWSNWSSW 10
N+W+ W W
Sbjct: 643 NWWTGWRQW 651


>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2 NFWSNWSSW 10
N+W+ W W
Sbjct: 643 NWWTGWRQW 651


>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 2 NFWSNWSSW 10
N+W+ W W
Sbjct: 643 NWWTGWRQW 651


>sp|Y043_TNAVC|STRUCTURAL protein ORF43|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 2 NFWSNWSSW 10
N WS S+W
Sbjct: 965 NVWSGASTW 973


>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2 NFWSNWSSW 10
N+W+ W W
Sbjct: 643 NWWTGWRQW 651


>sp|PB2_THOGV|POLYMERASE basic protein 2|Thogoto virus (isolate SiAr 126)

Query: 1 PNFWSNWSS 9
P++WS + S
Sbjct: 104 PDYWSKYGS 112


>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)

Query: 1 PNFWS 5
PNFW+
Sbjct: 448 PNFWT 452


>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /

Query: 1 PNFWS 5
PNFW+
Sbjct: 448 PNFWT 452


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3 FWSNWSSW 10
FW N ++W
Sbjct: 7113 FWRNSTTW 7120


>sp|019R_FRG3G|PUTATIVE serine/threonine-protein kinase 019R|Frog virus 3 (isolate Goorha)

Query: 4 WSNWSS 9
WS+WSS
Sbjct: 183 WSDWSS 188


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3 FWSNWSSW 10
FW N ++W
Sbjct: 7083 FWRNSTTW 7090


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3 FWSNWSSW 10
FW N ++W
Sbjct: 7063 FWRNSTTW 7070


>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 2 NFWSNWSSW 10
+FW+ S+W
Sbjct: 510 SFWARASTW 518


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 PNFWSNWSSW 10
P FW N S+
Sbjct: 1622 PTFWENAESF 1631


>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)

Query: 1 PNFWS 5
PNFW+
Sbjct: 438 PNFWT 442


>sp|S3_DPIRV|UNCHARACTERIZED protein S3|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)

Query: 5 SNWSSW 10
SN+SSW
Sbjct: 105 SNYSSW 110


>sp|S3BIS_DPIRV|UNCHARACTERIZED protein S3bis|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)

Query: 5 SNWSSW 10
SN+SSW
Sbjct: 105 SNYSSW 110


Query: 5 SNWSSW 10
SN+SSW
Sbjct: 455 SNYSSW 460


Query: 5 SNWSSW 10
SN+SSW
Sbjct: 805 SNYSSW 810


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 PNFWSNWSSW 10
P FW N S+
Sbjct: 1622 PTFWENAESF 1631


>sp|NSP2_ROTA1|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Turkey/Ireland/Ty-1/1978/G7P[17])

Query: 4 WSNWSSW 10
W+NW+++
Sbjct: 265 WTNWAAF 271


>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P

Query: 2 NFWSNWS 8
NF+ NW+
Sbjct: 114 NFYGNWA 120


>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 PNFWSNWS 8
P F+ NWS
Sbjct: 43 PGFFGNWS 50


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1 PNFWSNWSSW 10
P S+W SW
Sbjct: 1198 PKVNSSWLSW 1207


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 2 NFWSNWS 8
N+++NWS
Sbjct: 435 NYYANWS 441


>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)

Query: 2 NFWSNWSS 9
+FW +W S
Sbjct: 2187 HFWKHWIS 2194


>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)

Query: 2 NFWSNWSS 9
+FW +W S
Sbjct: 2188 HFWKHWIS 2195


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 2 NFWSNWS 8
N+++NWS
Sbjct: 435 NYYANWS 441


>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)

Query: 2 NFWSNWSS 9
+FW +W S
Sbjct: 2187 HFWKHWIS 2194


>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK

Query: 2 NFWSNWSS 9
+FW +W S
Sbjct: 2187 HFWKHWIS 2194


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 2 NFWSNWS 8
N+++NWS
Sbjct: 435 NYYANWS 441


>sp|RPOL_BPK11|DNA-DIRECTED RNA polymerase|Enterobacteria phage K11 (Bacteriophage K11)

Query: 6 NWSSW 10
NW+SW
Sbjct: 220 NWASW 224


>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 3 FWSNWSS 9
FW +W S
Sbjct: 2170 FWKHWIS 2176


>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)

Query: 3 FWSNWSS 9
FW +W S
Sbjct: 2254 FWKHWIS 2260


>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)

Query: 3 FWSNWSS 9
FW +W S
Sbjct: 2255 FWKHWIS 2261


>sp|PORTL_ALHV1|PORTAL protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 4 WSNWSSW 10
WS + SW
Sbjct: 89 WSTFQSW 95


>sp|VG57_BPMD2|GENE 57 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 4 WSNWSSW 10
WS W +W
Sbjct: 13 WSPWRNW 19


>sp|TRX1_EBVB9|TRIPLEX capsid protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 NFWSNWSSW 10
+F+SN S W
Sbjct: 352 SFYSNVSDW 360


>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)

Query: 3 FWSNWSS 9
FW +W S
Sbjct: 2169 FWKHWIS 2175


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1 PNFWSNWSS 9
P WS W++
Sbjct: 2283 PRVWSEWTN 2291


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 3 FWSNWSSW 10
W W +W
Sbjct: 772 LWQRWENW 779




27|Sequence|131|140|NWSSWEEVSV

>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 2 WSSWEEV 8
WS+WEEV
Sbjct: 3218 WSNWEEV 3224


>sp|TEG6_EHV1K|TEGUMENT protein UL55 homolog|Equine herpesvirus 1 (strain Kentucky

Query: 2 WSSWEEVS 9
WSSWE S
Sbjct: 54 WSSWETTS 61


>sp|TEG6_EHV1B|TEGUMENT protein UL55 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 2 WSSWEEVS 9
WSSWE S
Sbjct: 54 WSSWETTS 61


>sp|TMP_LAMBD|TAPE measure protein|Escherichia phage lambda (Bacteriophage lambda)

Query: 2 WSSWEE 7
WS WEE
Sbjct: 637 WSEWEE 642


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 2 WSSWEEV 8
WS+W+EV
Sbjct: 3223 WSNWQEV 3229


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 2 WSSWEEV 8
W+SWE+V
Sbjct: 3203 WASWEDV 3209


>sp|FIB31_BPHC1|PROBABLE tail fiber protein|Haemophilus phage HP1 (strain HP1c1)

Query: 1 NWSSWEE 7
NWS W++
Sbjct: 523 NWSEWKD 529


>sp|X_PAVHV|UNCHARACTERIZED protein X|Human parvovirus B19 (strain HV)

Query: 1 NWSSWE 6
NW SWE
Sbjct: 76 NWLSWE 81


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 2 WSSWEEV 8
W +WEEV
Sbjct: 3222 WDNWEEV 3228


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 2 WSSWEEV 8
W +WEEV
Sbjct: 3222 WDNWEEV 3228


>sp|TAP51_BPT4|BASEPLATE hub assembly protein gp51|Enterobacteria phage T4 (Bacteriophage

Query: 2 WSSWEEVS 9
W W+E+S
Sbjct: 144 WYDWKEIS 151


>sp|RPOL_BPK11|DNA-DIRECTED RNA polymerase|Enterobacteria phage K11 (Bacteriophage K11)

Query: 1 NWSSWE 6
NW+SW+
Sbjct: 220 NWASWK 225


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 2 WSSWEEV 8
+SSWEEV
Sbjct: 3214 YSSWEEV 3220


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 2 WSSWEEV 8
+SSWEEV
Sbjct: 3214 YSSWEEV 3220


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 2 WSSWEEV 8
W++W+EV
Sbjct: 3225 WTNWQEV 3231


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 2 WSSWEEVSV 10
W +W+E +V
Sbjct: 3206 WCTWKEPNV 3214


>sp|RPOL_BPT3|DNA-DIRECTED RNA polymerase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 2 WSSWEE 7
WSSW++
Sbjct: 202 WSSWDK 207


>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 2 WSSWEEV 8
W SWE V
Sbjct: 3201 WRSWESV 3207


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2 WSSWEEV 8
W+ W+EV
Sbjct: 3228 WADWQEV 3234


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 2 WSSWEEVSV 10
W +W+E +V
Sbjct: 3206 WCTWKEPNV 3214




28|Sequence|136|145|EEVSVQDSTG

***** No hits found ******


29|Sequence|141|150|QDSTGQDILF

>sp|YR405_MIMIV|PUTATIVE RNA methyltransferase R405|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 TGQDILF 10
TGQDILF
Sbjct: 231 TGQDILF 237


>sp|YL320_MIMIV|UNCHARACTERIZED protein L320|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 QDSTGQDILF 10
+D GQDI+F
Sbjct: 168 KDDLGQDIVF 177


>sp|HMUD2_BPSAV|5-HMDU DNA kinase 2|Salmonella phage ViI

Query: 2 DSTGQDILF 10
D +GQD+L+
Sbjct: 187 DYSGQDVLY 195


>sp|NRDD_BPT4|ANAEROBIC ribonucleoside-triphosphate reductase|Enterobacteria phage T4

Query: 1 QDSTGQDIL 9
+DSTG +IL
Sbjct: 298 KDSTGNEIL 306


>sp|V19_SPTNK|STRUCTURAL protein V19|Sputnik virophage

Query: 4 TGQDILF 10
TG+DILF
Sbjct: 57 TGRDILF 63


>sp|ICP4_SUHVK|MAJOR viral transcription factor ICP4|Suid herpesvirus 1 (strain

Query: 3 STGQDILF 10
S+G+D+LF
Sbjct: 46 SSGEDLLF 53


>sp|ICP4_SUHVF|MAJOR viral transcription factor ICP4|Suid herpesvirus 1 (strain

Query: 3 STGQDILF 10
S+G+D+LF
Sbjct: 47 SSGEDLLF 54


>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)

Query: 2 DSTGQDILF 10
D TGQ +LF
Sbjct: 1129 DPTGQKLLF 1137


>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)

Query: 2 DSTGQDILF 10
D TGQ +LF
Sbjct: 1129 DPTGQKLLF 1137


>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14

Query: 2 DSTGQDIL 9
DSTG D+L
Sbjct: 122 DSTGPDLL 129


>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21

Query: 2 DSTGQDIL 9
DSTG D+L
Sbjct: 122 DSTGPDLL 129




30|Sequence|146|155|QDILFVFPKD

>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 1 QDILFVFP 8
+DILF+FP
Sbjct: 1471 EDILFLFP 1478


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 1 QDILFVFP 8
+DILF+FP
Sbjct: 1471 EDILFLFP 1478


>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 1 QDILFVFPKD 10
QD+ +FP D
Sbjct: 1116 QDLFMIFPGD 1125


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 1 QDILFVFP 8
+D+LF+FP
Sbjct: 1468 EDLLFLFP 1475


>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 LFVFPKD 10
++VFPKD
Sbjct: 19 IYVFPKD 25


>sp|ORFB_WDSV|ORF-B protein|Walleye dermal sarcoma virus (WDSV)

Query: 2 DILFVFPKD 10
D+L +FP D
Sbjct: 186 DLLLMFPMD 194




31|Sequence|151|160|VFPKDKLVEE

>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 VFPKDK 6
VFPKDK
Sbjct: 21 VFPKDK 26


>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 2 FPKDKLVE 9
FPKD+L++
Sbjct: 2632 FPKDELLK 2639


>sp|DPOL_IIV6|DNA polymerase 037L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 FPKDKLVEE 10
FPKD+L +E
Sbjct: 350 FPKDQLGKE 358




32|Sequence|156|165|KLVEEGTNVT

>sp|YR514_MIMIV|UNCHARACTERIZED protein R514|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KLVEEGTNVT 10
KL+EE N+T
Sbjct: 51 KLIEESENIT 60


>sp|YR880_MIMIV|PUTATIVE ankyrin repeat protein R880|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LVEEGTNV 9
LVE GTNV
Sbjct: 160 LVELGTNV 167


>sp|YR259_MIMIV|UNCHARACTERIZED protein R259|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KLVEEGTNV 9
+L+EE TN+
Sbjct: 210 QLIEENTNI 218


>sp|Y088_OSHVF|PUTATIVE transmembrane protein ORF88|Ostreid herpesvirus 1 (isolate France)

Query: 1 KLVEEGTNVT 10
KL+++G N+T
Sbjct: 145 KLIKDGDNIT 154


>sp|YL056_MIMIV|PUTATIVE ankyrin repeat protein L56|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LVEEGTNVT 10
L+E GT++T
Sbjct: 495 LIENGTDIT 503


>sp|V222_FOWPN|PUTATIVE ankyrin repeat protein FPV222|Fowlpox virus (strain NVSL) (FPV)

Query: 2 LVEEGTNV 9
L+E GTNV
Sbjct: 189 LIENGTNV 196




33|Sequence|161|170|GTNVTICYVS

>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)

Query: 1 GTNVTICYVS 10
GTN+ +C VS
Sbjct: 167 GTNLVVCTVS 176


>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 GTNVTICYVS 10
GTN+ +C VS
Sbjct: 167 GTNLVVCTVS 176


>sp|GP41_BPSP1|PUTATIVE gene 41 protein|Bacillus phage SP01 (Bacteriophage SP01)

Query: 1 GTNVTICYVS 10
GTN +CY S
Sbjct: 95 GTNPDVCYFS 104


>sp|P32_MCMVK|UNCHARACTERIZED protein p32|Maize chlorotic mottle virus (isolate

Query: 2 TNVTICYVS 10
TNVT+C S
Sbjct: 204 TNVTVCSAS 212


>sp|NSP1_ROTME|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 2 TNVTICY 8
TN+T CY
Sbjct: 49 TNLTYCY 55


>sp|RFCS1_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 TICYVS 10
TICY+S
Sbjct: 187 TICYIS 192


>sp|POLN_AURAV|POLYPROTEIN P1234|Aura virus (AURAV)

Query: 2 TNVTIC 7
TN+T+C
Sbjct: 1628 TNITVC 1633




34|Sequence|166|175|ICYVSRNIQN

>sp|POL1_CRLVP|RNA1 polyprotein|Cherry rasp leaf virus (isolate

Query: 1 ICYVSRNIQN 10
ICY+SRN ++
Sbjct: 2141 ICYISRNYES 2150


>sp|GM_EHV2|ENVELOPE glycoprotein M|Equine herpesvirus 2 (strain 86/87)

Query: 2 CYVSRNIQ 9
CY+SRN Q
Sbjct: 171 CYISRNSQ 178


>sp|PHUZ_BPDPK|PHAGE tubulin-like protein|Pseudomonas phage phiKZ

Query: 1 ICYVSRNIQN 10
+CY+ ++QN
Sbjct: 30 VCYIDTSVQN 39


>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 CYVSRNI 8
C+VSRN+
Sbjct: 392 CHVSRNM 398


>sp|YL484_MIMIV|PUTATIVE ankyrin repeat protein L484|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 ICYVSRNIQ 9
I Y++RN Q
Sbjct: 1148 IAYITRNFQ 1156




35|Sequence|171|180|RNIQNNVSCY

>sp|RDRP_AQRVA|RNA-DIRECTED RNA polymerase VP2|Aquareovirus A (isolate Chum

Query: 2 NIQNNVSC 9
NIQNN C
Sbjct: 696 NIQNNYVC 703


>sp|CAP3_ADEB3|PRE-HEXON-LINKING protein IIIa|Bovine adenovirus B serotype 3

Query: 1 RNIQNN 6
RN+QNN
Sbjct: 486 RNVQNN 491


>sp|DPOL_WHV3|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 RNIQNNVS 8
RN+ NN+S
Sbjct: 227 RNLSNNIS 234


>sp|DPOL_WHV5|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 RNIQNNVS 8
RN+ NN+S
Sbjct: 227 RNLSNNIS 234


>sp|DPOL_WHV2|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 RNIQNNVS 8
RN+ NN+S
Sbjct: 226 RNLSNNIS 233


>sp|DPOL_WHV4|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 RNIQNNVS 8
RN+ NN+S
Sbjct: 227 RNLSNNIS 234




36|Sequence|176|185|NVSCYLEGKQ

>sp|PLP_BPSAV|O-SERYL-DTMP PLP-dependent decarboxylase|Salmonella phage ViI

Query: 2 VSCYLEGKQ 10
+SCY+ GKQ
Sbjct: 78 LSCYMNGKQ 86


>sp|CAPSD_SHVX|CAPSID protein|Shallot virus X (ShVX)

Query: 3 SCYLEGKQ 10
SCY+ GKQ
Sbjct: 162 SCYVSGKQ 169


>sp|CVC1_ALHV1|CAPSID vertex component 1|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 VSCYLEGKQ 10
+SC LEGK
Sbjct: 412 LSCQLEGKH 420


>sp|ACTC_BPMU|LATE transcription activator C|Escherichia phage Mu (Bacteriophage Mu)

Query: 2 VSCYLEGKQ 10
+SC+L G+Q
Sbjct: 65 LSCFLGGRQ 73


>sp|VP4_BANNV|OUTER capsid protein VP4|Banna virus (BAV)

Query: 4 CYLEGKQ 10
C LEGKQ
Sbjct: 465 CKLEGKQ 471


>sp|POLG_HAVS2|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 2 VSCYLEGKQ 10
V CYL GK+
Sbjct: 1228 VVCYLYGKR 1236


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 VSCYLEGKQ 10
V CYL GK+
Sbjct: 1224 VVCYLYGKR 1232


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 VSCYLEGKQ 10
V CYL GK+
Sbjct: 1224 VVCYLYGKR 1232


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 VSCYLEGKQ 10
V CYL GK+
Sbjct: 1224 VVCYLYGKR 1232


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 VSCYLEGKQ 10
V CYL GK+
Sbjct: 1224 VVCYLYGKR 1232


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 VSCYLEGKQ 10
V CYL GK+
Sbjct: 1224 VVCYLYGKR 1232


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 VSCYLEGKQ 10
V CYL GK+
Sbjct: 1224 VVCYLYGKR 1232


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 VSCYLEGKQ 10
V CYL GK+
Sbjct: 1224 VVCYLYGKR 1232


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 VSCYLEGKQ 10
V CYL GK+
Sbjct: 1224 VVCYLYGKR 1232


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 2 VSCYLEG 8
VSC+L+G
Sbjct: 1083 VSCFLQG 1089


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 1 NVSCYLEGK 9
N +CY GK
Sbjct: 1189 NPNCYFNGK 1197


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 VSCYLEGKQ 10
V CYL GK+
Sbjct: 1224 VVCYLIGKR 1232


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 2 VSCYLEGK 9
++CY EG+
Sbjct: 2066 INCYTEGQ 2073


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2 VSCYLEGK 9
++CY EG+
Sbjct: 2066 INCYTEGQ 2073


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2 VSCYLEGK 9
++CY EG+
Sbjct: 2066 INCYTEGQ 2073


>sp|DNMK_BPT4|DEOXYNUCLEOTIDE monophosphate kinase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 4 CYLEGK 9
CYL GK
Sbjct: 88 CYLNGK 93


>sp|VP6_FDVS|UNCHARACTERIZED protein VP6|Fiji disease virus (isolate Sugarcane)

Query: 1 NVSCYLEGK 9
N+ C+ EGK
Sbjct: 712 NLECFQEGK 720


>sp|U18_HHV6Z|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (strain Z29)

Query: 2 VSCYLEG 8
V+C+LEG
Sbjct: 125 VNCWLEG 131


>sp|U18_HHV6H|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (HHV-6 variant

Query: 2 VSCYLEG 8
V+C+LEG
Sbjct: 125 VNCWLEG 131




37|Sequence|181|190|LEGKQIHGEQ

>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 LEGKQIHGE 9
+EGKQI G+
Sbjct: 1277 VEGKQIDGK 1285


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 LEGKQIHGE 9
+EGKQI G+
Sbjct: 1277 VEGKQIDGK 1285




38|Sequence|186|195|IHGEQLDPHV

>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 4 EQLDPHV 10
E+LDPH+
Sbjct: 918 EKLDPHI 924


>sp|P3_RDVF|OUTER capsid protein P3|Rice dwarf virus (isolate Fujian)

Query: 1 IHGEQLDPH 9
+HG +LDP+
Sbjct: 1005 VHGVRLDPN 1013


>sp|P3_RDVA|OUTER capsid protein P3|Rice dwarf virus (isolate Akita)

Query: 1 IHGEQLDPH 9
+HG +LDP+
Sbjct: 1005 VHGVRLDPN 1013


>sp|SHUT_ADEP3|SHUTOFF protein|Porcine adenovirus A serotype 3

Query: 2 HGEQLDPH 9
HG LDPH
Sbjct: 687 HGVYLDPH 694


>sp|CAPSP_ADEG1|PENTON protein|Fowl adenovirus A serotype 1

Query: 1 IHGEQLDP 8
IH + LDP
Sbjct: 103 IHNQDLDP 110


>sp|CVC1_HHV8P|CAPSID vertex component 1|Human herpesvirus 8 type P

Query: 1 IHGEQLDPHV 10
+ GE LDP V
Sbjct: 198 VRGESLDPPV 207


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 2 HGEQLDPHV 10
HGEQ+ P +
Sbjct: 169 HGEQVYPFI 177


>sp|EV167_ASFWA|ENVELOPE protein 167|African swine fever virus (isolate

Query: 2 HGEQLDPH 9
+GE DPH
Sbjct: 112 YGELYDPH 119




39|Sequence|191|200|LDPHVTAFNL

>sp|VF179_IIV6|UNCHARACTERIZED protein 179R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 LDPHVTAFNL 10
+D HV+AF L
Sbjct: 419 IDGHVSAFRL 428


>sp|PRO_ADEG1|PROTEASE adenovirus A serotype 1

Query: 1 LDPHVTA 7
LDPHV A
Sbjct: 34 LDPHVPA 40


>sp|GH_EHV2|ENVELOPE glycoprotein H|Equine herpesvirus 2 (strain 86/87)

Query: 2 DPHVTAFNL 10
D HV FNL
Sbjct: 576 DRHVATFNL 584


>sp|VP6_MYRV9|MICROTUBULE-ASSOCIATED protein VP6|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 2 DPHVTAF 8
DP +TAF
Sbjct: 523 DPRITAF 529




40|Sequence|196|205|TAFNLNSVPF

>sp|DPOL_NPVBM|DNA polymerase|Bombyx mori nuclear polyhedrosis virus

Query: 3 FNLNSVPF 10
FNLNS+ F
Sbjct: 655 FNLNSIGF 662


>sp|YL829_MIMIV|UNCHARACTERIZED protein L829|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 TAFNLNSVPF 10
T +NSVPF
Sbjct: 75 TGLTVNSVPF 84




41|Sequence|201|210|NSVPFIRNKG

>sp|RDRP_RGDV|RNA-DIRECTED RNA polymerase P1|Rice gall dwarf virus (RGDV)

Query: 2 SVPFIRN 8
SVPF+RN
Sbjct: 1445 SVPFLRN 1451


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 4 PFIRNKG 10
PF++NKG
Sbjct: 3334 PFMQNKG 3340


>sp|YO20_ADEG1|UNCHARACTERIZED protein ORF20|Fowl adenovirus A serotype 1

Query: 1 NSVPFIRN 8
+SVPF+R+
Sbjct: 137 SSVPFVRS 144


>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 VPFIRN 8
VPFIRN
Sbjct: 181 VPFIRN 186


>sp|PG187_VACCW|B1 kinase|Vaccinia virus (strain Western Reserve)

Query: 3 VPFIRN 8
VPFIRN
Sbjct: 181 VPFIRN 186


>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 VPFIRN 8
VPFIRN
Sbjct: 181 VPFIRN 186


>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)

Query: 3 VPFIRN 8
VPFIRN
Sbjct: 181 VPFIRN 186


>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)

Query: 3 VPFIRN 8
VPFIRN
Sbjct: 181 VPFIRN 186


>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 1 NSVPFIRNKG 10
N+V +I NKG
Sbjct: 378 NAVHYIDNKG 387


>sp|Y892_ATV|PUTATIVE VWFA domain-containing protein ORF892|Acidianus two-tailed virus

Query: 5 FIRNKG 10
F+RNKG
Sbjct: 655 FVRNKG 660




42|Sequence|206|215|IRNKGTNIYC

>sp|VP5_LDCPR|PUTATIVE structural protein VP5|Lymantria dispar cypovirus 1 (isolate

Query: 1 IRNKGTN 7
IRN GTN
Sbjct: 19 IRNDGTN 25


>sp|S1_BPMU|TAIL fiber protein S|Escherichia phage Mu (Bacteriophage Mu)

Query: 1 IRNKGTNIY 9
IRN G+N Y
Sbjct: 291 IRNDGSNTY 299


>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39

Query: 3 NKGTNIYC 10
N G+++YC
Sbjct: 284 NPGSSVYC 291


>sp|YL451_MIMIV|UNCHARACTERIZED protein L451|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 NKGTNIYC 10
NK TN YC
Sbjct: 130 NKSTNYYC 137


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 IRNKGTNIYC 10
I+N+ T +YC
Sbjct: 2775 IQNRITGLYC 2784


>sp|Y116_AFV2P|UNCHARACTERIZED protein ORF116|Acidianus filamentous virus 2 (isolate

Query: 3 NKGTNIYC 10
+KG +IYC
Sbjct: 39 HKGYHIYC 46


>sp|NRAM_I79A6|NEURAMINIDASE A virus (strain A/Equine/New

Query: 1 IRNKGTNIYC 10
+ N GT +YC
Sbjct: 36 LNNNGTGLYC 45


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 4 KGTNIYC 10
KGT I+C
Sbjct: 1217 KGTGIFC 1223


>sp|YO10_ADEG1|PUTATIVE Ig-like domain-containing protein ORF10|Fowl adenovirus A serotype

Query: 2 RNKGTNIY 9
+N GTN+Y
Sbjct: 105 KNAGTNLY 112


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 4 KGTNIYC 10
KGT I+C
Sbjct: 1217 KGTGIFC 1223




43|Sequence|211|220|TNIYCEASQG

>sp|YL273_MIMIV|PUTATIVE ankyrin repeat protein L273|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 NIYCEASQG 10
N++CE S+G
Sbjct: 210 NLFCELSKG 218


>sp|127L_IIV6|UNCHARACTERIZED protein 127L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 NIYCEAS 8
NIYC AS
Sbjct: 66 NIYCMAS 72


>sp|L_PIRVV|RNA-DIRECTED RNA polymerase L|Pirital mammarenavirus (isolate

Query: 2 NIYCE 6
NIYCE
Sbjct: 1653 NIYCE 1657




44|Sequence|216|225|EASQGNVSEG

***** No hits found ******


45|Sequence|221|230|NVSEGMKGIV

>sp|GL_VZVO|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Oka vaccine)

Query: 1 NVSEGMKGIV 10
N+SE + GIV
Sbjct: 66 NLSEALSGIV 75


>sp|GL_VZVD|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 NVSEGMKGIV 10
N+SE + GIV
Sbjct: 65 NLSEALSGIV 74




46|Sequence|226|235|MKGIVLFVSK

>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 KGIVLFVSK 10
K IVLFVS+
Sbjct: 2907 KQIVLFVSR 2915


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 KGIVLFVSK 10
K IVLFVS+
Sbjct: 2907 KQIVLFVSR 2915


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 MKGIVLFVSK 10
+ G+V+FV+K
Sbjct: 750 LNGVVVFVTK 759


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 MKGIVLFVSK 10
+ G+V+FV+K
Sbjct: 750 LNGVVVFVTK 759


>sp|MCEL_FOWPN|MRNA-CAPPING enzyme catalytic subunit|Fowlpox virus (strain NVSL) (FPV)

Query: 2 KGIVLFVSK 10
+GI+LF SK
Sbjct: 380 EGIILFYSK 388




47|Sequence|231|240|LFVSKVLEEP

>sp|GLYC_GOGV|GLYCOPROTEIN 1 reptarenavirus (isolate AlRrV1/Boa/USA/BC/2009)

Query: 1 LFVSKVLEEP 10
+FV+K+L EP
Sbjct: 99 IFVNKILYEP 108




48|Sequence|236|245|VLEEPKDFSC

>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus

Query: 1 VLEEPKDF 8
VL EP+DF
Sbjct: 559 VLSEPEDF 566


>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus

Query: 3 EEPKDFSC 10
EEP D+ C
Sbjct: 101 EEPTDYQC 108


>sp|YL615_MIMIV|PUTATIVE phosphatidylinositol kinase L615|Acanthamoeba polyphaga mimivirus

Query: 1 VLEEPKDFSC 10
++E PK SC
Sbjct: 233 IIENPKKVSC 242


>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 5 PKDFSC 10
PKDF C
Sbjct: 2132 PKDFFC 2137


>sp|REP_TMOV|REPLICATION-ASSOCIATED protein|Tomato mottle virus (isolate Florida)

Query: 3 EEPKDF 8
E+PKDF
Sbjct: 153 EQPKDF 158


>sp|POLB_CHPVE|ORFB polyprotein|Cryphonectria hypovirus 1 (strain EP713)

Query: 5 PKDFSC 10
PKDF C
Sbjct: 2133 PKDFFC 2138


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 VLEEPKDF 8
++EEP+D+
Sbjct: 1633 IVEEPEDY 1640


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 VLEEPKDF 8
++EEP+D+
Sbjct: 1799 IVEEPEDY 1806


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 VLEEPKDF 8
++EEP+D+
Sbjct: 1799 IVEEPEDY 1806


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 VLEEPKDF 8
++EEP+D+
Sbjct: 1799 IVEEPEDY 1806


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 VLEEPKDF 8
++EEP+D+
Sbjct: 1799 IVEEPEDY 1806


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 VLEEPKDF 8
++EEP+D+
Sbjct: 1799 IVEEPEDY 1806


>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 EEPKDFSC 10
EEP+ F C
Sbjct: 28 EEPETFEC 35


>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 EEPKDFSC 10
EEP+ F C
Sbjct: 28 EEPETFEC 35


>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 EEPKDFSC 10
EEP+ F C
Sbjct: 28 EEPETFEC 35




49|Sequence|241|250|KDFSCETEDF

>sp|MVP_TVMV|P3N-PIPO polyprotein|Tobacco vein mottling virus (TVMV)

Query: 1 KDFSCETED 9
K F C+T+D
Sbjct: 964 KHFKCKTQD 972




50|Sequence|246|255|ETEDFKTLHC

>sp|GCNT3_BHV4D|BETA-1,3-GALACTOSYL-O-GLYCOSYL-GLYCOPROTEIN beta-1,6-N-acetylglucosaminyltransferase|Bovine herpesvirus 4

Query: 1 ETEDFKTLHC 10
E+ DF++ HC
Sbjct: 46 ESRDFQSQHC 55


>sp|GCNT3_BHV4V|BETA-1,3-GALACTOSYL-O-GLYCOSYL-GLYCOPROTEIN beta-1,6-N-acetylglucosaminyltransferase|Bovine herpesvirus 4

Query: 1 ETEDFKTLHC 10
E+ DF++ HC
Sbjct: 46 ESRDFQSQHC 55


>sp|GCNT3_BHV4L|BETA-1,3-GALACTOSYL-O-GLYCOSYL-GLYCOPROTEIN beta-1,6-N-acetylglucosaminyltransferase|Bovine herpesvirus 4

Query: 1 ETEDFKTLHC 10
E+ DF++ HC
Sbjct: 46 ESRDFQSQHC 55


>sp|GCNT3_BHV4|BETA-1,3-GALACTOSYL-O-GLYCOSYL-GLYCOPROTEIN beta-1,6-N-acetylglucosaminyltransferase|Bovine herpesvirus 4

Query: 1 ETEDFKTLHC 10
E+ DF++ HC
Sbjct: 45 ESRDFQSQHC 54


>sp|PG053_VARV|EFC-ASSOCIATED protein OPG053|Variola virus

Query: 1 ETEDFKTLH 9
ET++FKTL+
Sbjct: 3 ETKEFKTLY 11


>sp|PG053_VAR67|EFC-ASSOCIATED protein OPG053|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 ETEDFKTLH 9
ET++FKTL+
Sbjct: 3 ETKEFKTLY 11


>sp|PG053_VACCW|ENTRY-FUSION complex associated protein OPG083|Vaccinia virus (strain Western

Query: 1 ETEDFKTLH 9
ET++FKTL+
Sbjct: 3 ETKEFKTLY 11


>sp|PG053_VACCP|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 ETEDFKTLH 9
ET++FKTL+
Sbjct: 3 ETKEFKTLY 11


>sp|PG053_VACCC|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 ETEDFKTLH 9
ET++FKTL+
Sbjct: 3 ETKEFKTLY 11


>sp|PG053_MONPV|EFC-ASSOCIATED protein OPG053|Monkeypox virus (MPXV)

Query: 1 ETEDFKTLH 9
ET++FKTL+
Sbjct: 3 ETKEFKTLY 11


>sp|SPIKE_IBVD2|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 TEDFKTLHC 10
TE F T HC
Sbjct: 93 TEQFCTAHC 101


>sp|SPIKE_IBV6|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 TEDFKTLHC 10
TE F T HC
Sbjct: 93 TEQFCTAHC 101


>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain

Query: 1 ETEDFKTLH 9
ETE+FK L+
Sbjct: 259 ETENFKDLN 267


>sp|ENV_EIAV1|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 1 ETEDFKTL 8
+TE+FKT+
Sbjct: 215 QTENFKTI 222


>sp|ENV_EIAVY|ENVELOPE glycoprotein|Equine infectious anemia virus (strain

Query: 1 ETEDFKTL 8
+TE+FKT+
Sbjct: 215 QTENFKTI 222


>sp|ENV_EIAVW|ENVELOPE glycoprotein|Equine infectious anemia virus (strain

Query: 1 ETEDFKTL 8
+TE+FKT+
Sbjct: 215 QTENFKTI 222


>sp|ENV_EIAVC|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 1 ETEDFKTL 8
+TE+FKT+
Sbjct: 215 QTENFKTI 222


>sp|ENV_EIAV9|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 1 ETEDFKTL 8
+TE+FKT+
Sbjct: 215 QTENFKTI 222


>sp|ENV_EIAV2|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 1 ETEDFKTL 8
+TE+FKT+
Sbjct: 215 QTENFKTI 222


>sp|ENV_EIAV5|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 1 ETEDFKTL 8
+TE+FKT+
Sbjct: 215 QTENFKTI 222




51|Sequence|251|260|KTLHCTWDPG

>sp|TIP_SHV48|TYROSINE protein kinase-interacting protein|Saimiriine herpesvirus 2 (strain

Query: 1 KTLHCTWDPG 10
+ L TWDPG
Sbjct: 173 RDLSATWDPG 182


>sp|VF350_IIV6|UNCHARACTERIZED protein 350L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 KTLHCTWD 8
K +HC WD
Sbjct: 46 KEIHCFWD 53


>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK

Query: 3 LHCTWDPG 10
LHC W G
Sbjct: 2508 LHCPWSVG 2515


>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)

Query: 3 LHCTWDPG 10
LHC W G
Sbjct: 2508 LHCPWSVG 2515


>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)

Query: 3 LHCTWDPG 10
LHC W G
Sbjct: 2508 LHCPWSVG 2515


>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)

Query: 3 LHCTWDPG 10
LHC W G
Sbjct: 2509 LHCPWSVG 2516


>sp|YL138_MIMIV|UNCHARACTERIZED protein L138|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KTLHCTWD 8
K+ H TWD
Sbjct: 214 KSYHLTWD 221


>sp|IR11_HCMVA|VIRAL Fc-gamma receptor-like protein IR11|Human cytomegalovirus (strain

Query: 2 TLHCTWDPG 10
+LHC W G
Sbjct: 182 SLHCAWVSG 190


>sp|CLINK_MDV1|CELL cycle link protein|Milk vetch dwarf virus (isolate

Query: 4 HCTWDP 9
HC W P
Sbjct: 156 HCIWAP 161


>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 TLHCTWDPG 10
+LHC W G
Sbjct: 182 SLHCAWVSG 190


>sp|POLG_PPVEA|GENOME polyprotein|Plum pox potyvirus (strain El

Query: 3 LHCTWDPG 10
LHC W G
Sbjct: 884 LHCPWSVG 891


>sp|DRTS_MIMIV|BIFUNCTIONAL dihydrofolate reductase-thymidylate synthase|Acanthamoeba polyphaga

Query: 4 HCTWDPG 10
HC DPG
Sbjct: 488 HCDLDPG 494


>sp|FUS_CDVO|FUSION glycoprotein F0|Canine distemper virus (strain Onderstepoort)

Query: 4 HCTW 7
HCTW
Sbjct: 115 HCTW 118


>sp|RDRP_TCV|RNA-DIRECTED RNA polymerase|Turnip crinkle virus (TCV)

Query: 3 LHCTWDP 9
L C WDP
Sbjct: 749 LLCEWDP 755


>sp|E3GL_ADE03|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 3

Query: 2 TLHCTWDPG 10
TL TW+PG
Sbjct: 74 TLSTTWEPG 82


>sp|YL142_MIMIV|UNCHARACTERIZED protein L142|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KTLHCTWD 8
K H TWD
Sbjct: 450 KAYHLTWD 457


>sp|E3GL_ADE1A|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 11

Query: 2 TLHCTWDPG 10
TL TW+PG
Sbjct: 69 TLSTTWEPG 77


>sp|YG36_BPMV4|UNCHARACTERIZED protein ORF6|Lactococcus phage mv4 (Lactococcus delbrueckii

Query: 5 CTWDPG 10
C W PG
Sbjct: 67 CKWPPG 72


>sp|E3GL_ADE35|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 35

Query: 2 TLHCTWDPG 10
TL TW+PG
Sbjct: 69 TLSTTWEPG 77


>sp|E3GL_ADE1P|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 11

Query: 2 TLHCTWDPG 10
TL TW+PG
Sbjct: 69 TLSTTWEPG 77


>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 4 HCTWDP 9
HC +DP
Sbjct: 2229 HCEYDP 2234


>sp|1A_PZSVT|REPLICATION protein 1a|Pelargonium zonate spot virus (isolate

Query: 4 HCTWDP 9
HC W P
Sbjct: 312 HCVWFP 317


>sp|1A_PSVJ|REPLICATION protein 1a|Peanut stunt virus (strain J)

Query: 4 HCTWDP 9
HC W P
Sbjct: 327 HCVWFP 332


>sp|POLG_PVCV2|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 4 HCTWD 8
HC WD
Sbjct: 372 HCPWD 376


>sp|YL137_MIMIV|UNCHARACTERIZED protein L137|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KTLHCTWD 8
K H TWD
Sbjct: 211 KCYHLTWD 218


>sp|POLG_PVCV1|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 4 HCTWD 8
HC WD
Sbjct: 371 HCPWD 375


>sp|1A_CMVO|REPLICATION protein 1a|Cucumber mosaic virus (strain O)

Query: 4 HCTWDP 9
HC W P
Sbjct: 332 HCIWFP 337


>sp|1A_CMVY|REPLICATION protein 1a|Cucumber mosaic virus (strain Y)

Query: 4 HCTWDP 9
HC W P
Sbjct: 332 HCIWFP 337


>sp|1A_CMVII|REPLICATION protein 1a|Cucumber mosaic virus (strain Iizuka)

Query: 4 HCTWDP 9
HC W P
Sbjct: 332 HCIWFP 337


>sp|1A_CMVFN|REPLICATION protein 1a|Cucumber mosaic virus (strain FNY)

Query: 4 HCTWDP 9
HC W P
Sbjct: 332 HCIWFP 337


>sp|1A_CMVQ|REPLICATION protein 1a|Cucumber mosaic virus (strain Q)

Query: 4 HCTWDP 9
HC W P
Sbjct: 332 HCIWFP 337


>sp|1A_CMVNT|REPLICATION protein 1a|Cucumber mosaic virus (strain NT9)

Query: 4 HCTWDP 9
HC W P
Sbjct: 332 HCIWFP 337


>sp|1A_CMVIX|REPLICATION protein 1a|Cucumber mosaic virus (strain Ixora)

Query: 4 HCTWDP 9
HC W P
Sbjct: 332 HCIWFP 337


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 3 LHCTWDP 9
LH TW P
Sbjct: 835 LHVTWKP 841


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 3 LHCTWDP 9
LH TW P
Sbjct: 835 LHVTWKP 841


>sp|VG11_SHV21|UNCHARACTERIZED gene 11 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 5 CTWDPG 10
C W PG
Sbjct: 325 CEWKPG 330


>sp|L_TAVCV|RNA-DIRECTED RNA polymerase L|Taro vein chlorosis virus (TAVCV)

Query: 3 LHCTWD 8
+H TWD
Sbjct: 1597 MHSTWD 1602


>sp|VL3_HPV5B|PROBABLE protein L3|Human papillomavirus type 5b

Query: 3 LHCTWDPG 10
LHC W G
Sbjct: 64 LHCRWQCG 71


>sp|GP_BUNGE|ENVELOPMENT polyprotein|Bunyavirus germiston

Query: 3 LHCTWDPG 10
+ CT DPG
Sbjct: 1315 ISCTRDPG 1322




52|Sequence|256|265|TWDPGTDTAL

>sp|TIP_SHV48|TYROSINE protein kinase-interacting protein|Saimiriine herpesvirus 2 (strain

Query: 1 TWDPGTDT 8
TWDPG T
Sbjct: 178 TWDPGMPT 185


>sp|TIP_SHV24|TYROSINE-PROTEIN kinase-interacting protein|Saimiriine herpesvirus 2 (strain 484-77)

Query: 1 TWDPG 5
+WDPG
Sbjct: 127 SWDPG 131


>sp|MP_ACLSP|PUTATIVE movement protein|Apple chlorotic leaf spot virus

Query: 3 DPGTDTAL 10
+PGTDT +
Sbjct: 388 NPGTDTGV 395


>sp|ENV_FIVPE|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate Petaluma)

Query: 2 WDPGTDTAL 10
W+ G+DT+L
Sbjct: 464 WNVGSDTSL 472


>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 3 DPGTDTA 9
D GTDTA
Sbjct: 4 DKGTDTA 10




53|Sequence|261|270|TDTALGWSKQ

>sp|GL_GAHVM|ENVELOPE glycoprotein L|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 TDTALGWSK 9
T+T L WSK
Sbjct: 20 TNTVLAWSK 28


>sp|GL_GAHVG|ENVELOPE glycoprotein L|Gallid herpesvirus 2 (strain GA)

Query: 1 TDTALGWSK 9
T+T L WSK
Sbjct: 20 TNTVLAWSK 28


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 1 TDTALGWS 8
TD LGWS
Sbjct: 571 TDAFLGWS 578


>sp|ENV_RSVP|ENVELOPE glycoprotein gp95|Rous sarcoma virus subgroup C

Query: 5 LGWSKQ 10
LGWSKQ
Sbjct: 205 LGWSKQ 210


>sp|MCP_SHV21|MAJOR capsid protein|Saimiriine herpesvirus 2 (strain 11)

Query: 2 DTALGWS 8
DTALG+S
Sbjct: 1086 DTALGYS 1092


>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)

Query: 2 DTALGWSK 9
DTAL W K
Sbjct: 49 DTALVWMK 56


>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)

Query: 2 DTALGWSK 9
DTAL W K
Sbjct: 49 DTALVWMK 56


>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)

Query: 2 DTALGWSK 9
DTAL W K
Sbjct: 49 DTALVWMK 56


>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)

Query: 2 DTALGWSK 9
DTAL W K
Sbjct: 49 DTALVWMK 56


>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)

Query: 2 DTALGWSK 9
DTAL W K
Sbjct: 49 DTALVWMK 56


>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)

Query: 2 DTALGWSK 9
DTAL W K
Sbjct: 49 DTALVWMK 56


>sp|ENV_ALVA|ENVELOPE glycoprotein gp95|Avian leukosis virus subgroup A

Query: 5 LGWSKQ 10
LGWS+Q
Sbjct: 204 LGWSRQ 209




54|Sequence|266|275|GWSKQPSQSY

>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 GWSKQPSQSY 10
GW +QP S+
Sbjct: 1138 GWQRQPVTSF 1147


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 2 WSKQPSQSY 10
W+K+PSQ +
Sbjct: 2092 WTKKPSQMH 2100


>sp|Y206_ADE07|UNCHARACTERIZED 20.6 kDa early protein|Human adenovirus B serotype 7

Query: 2 WSKQPSQ 8
WS++PSQ
Sbjct: 13 WSQRPSQ 19


>sp|L_RYSV|RNA-DIRECTED RNA polymerase L|Rice yellow stunt virus (RYSV)

Query: 1 GWSKQPSQSY 10
GW+K P Y
Sbjct: 1402 GWTKMPDSFY 1411


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 1 GWSKQPSQSY 10
GW KQ Q Y
Sbjct: 895 GWVKQLQQDY 904


>sp|MCP_SHV21|MAJOR capsid protein|Saimiriine herpesvirus 2 (strain 11)

Query: 2 WSKQPSQSY 10
W K P SY
Sbjct: 986 WHKSPMSSY 994


>sp|VF369_IIV3|PROBABLE RAD2-like endonuclease 076L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 WSKQPSQSY 10
WSK PS ++
Sbjct: 337 WSKYPSDNF 345


>sp|VG50_BPMD2|PUTATIVE adenosylcobalamin-dependent ribonucleoside-triphosphate

Query: 1 GWSKQPSQSY 10
GW+++PS +
Sbjct: 94 GWTEKPSDHF 103


>sp|110R_IIV6|UNCHARACTERIZED protein 110R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 GWSKQPS 7
GWS QPS
Sbjct: 57 GWSYQPS 63


>sp|VMT8_MYXVL|KELCH repeat protein M-T8|Myxoma virus (strain Lausanne) (MYXV)

Query: 2 WSKQPSQS 9
WS+QP+ S
Sbjct: 306 WSRQPNLS 313


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 2 WSKQPSQ 8
W+K+PSQ
Sbjct: 2099 WTKKPSQ 2105


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 2 WSKQPSQ 8
W+K+PSQ
Sbjct: 2099 WTKKPSQ 2105


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 2 WSKQPSQ 8
W+K+PSQ
Sbjct: 2095 WTKKPSQ 2101


>sp|VG50_BPMB2|PUTATIVE adenosylcobalamin-dependent ribonucleoside-triphosphate

Query: 1 GWSKQPSQSY 10
GW+++PS +
Sbjct: 90 GWTEKPSDHF 99




55|Sequence|271|280|PSQSYTLFES

>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 PSQSYTLFES 10
P+ SY +FE+
Sbjct: 337 PNDSYVVFET 346


>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)

Query: 1 PSQSYTLFES 10
P+ SY +FE+
Sbjct: 337 PNDSYVVFET 346


>sp|YR608_MIMIV|UNCHARACTERIZED protein R608|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PSQSYTLFE 9
PS+S TLF+
Sbjct: 9 PSESATLFK 17




56|Sequence|276|285|TLFESFSGEK

>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 TLFESFSGEK 10
TLF S SGE+
Sbjct: 2762 TLFSSASGER 2771


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 TLFESFSGEK 10
TLF S SGE+
Sbjct: 2762 TLFSSASGER 2771




57|Sequence|281|290|FSGEKKLCTH

>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain

Query: 2 SGEKKLCT 9
+GE+K+CT
Sbjct: 675 AGERKMCT 682


>sp|DPOL_ASFL6|DNA polymerase beta|African swine fever virus (isolate

Query: 3 GEKKLCTH 10
GEKK C H
Sbjct: 600 GEKKECIH 607


>sp|VG49_BPML5|GENE 49 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 3 GEKKLCTH 10
GEK+ C H
Sbjct: 134 GEKRYCQH 141


>sp|DPOL_ASFM2|DNA polymerase beta|African swine fever virus (isolate

Query: 3 GEKKLCTH 10
GEKK C H
Sbjct: 600 GEKKECIH 607


>sp|DPOL_ASFB7|DNA polymerase beta|African swine fever virus (strain

Query: 3 GEKKLCTH 10
GEKK C H
Sbjct: 604 GEKKECIH 611


>sp|DPOL_ASFK5|DNA polymerase beta|African swine fever virus (isolate

Query: 3 GEKKLCTH 10
GEKK C H
Sbjct: 600 GEKKECIH 607


>sp|DPOL_ASFP4|DNA polymerase beta|African swine fever virus (isolate

Query: 3 GEKKLCTH 10
GEKK C H
Sbjct: 600 GEKKECIH 607


>sp|DPOL_ASFWA|DNA polymerase beta|African swine fever virus (isolate

Query: 3 GEKKLCTH 10
GEKK C H
Sbjct: 600 GEKKECIH 607


>sp|YR225_MIMIV|PUTATIVE BTB/POZ domain-containing protein R225|Acanthamoeba polyphaga

Query: 1 FSGEKKLC 8
F GE K+C
Sbjct: 436 FGGESKIC 443




58|Sequence|286|295|KLCTHKNWCN

>sp|ORF3_TTVD1|UNCHARACTERIZED ORF3 protein|Torque teno tupaia virus (isolate

Query: 2 LCTHKNWCN 10
L +HK+WCN
Sbjct: 12 LLSHKSWCN 20


>sp|CAPSD_MNV1|CAPSID protein VP1|Norovirus (isolate Mouse/NoV/United

Query: 1 KLCTHKNW 8
+LCTH W
Sbjct: 238 RLCTHARW 245


>sp|R1A_GLRV3|REPLICASE protein 1a|Grapevine leafroll-associated virus 3 (isolate

Query: 2 LCTHKNWC 9
+CT K WC
Sbjct: 304 VCTTKGWC 311


>sp|R1AB_GLRV3|REPLICASE polyprotein 1ab|Grapevine leafroll-associated virus 3 (isolate

Query: 2 LCTHKNWC 9
+CT K WC
Sbjct: 304 VCTTKGWC 311


>sp|ORF2_TTVD1|UNCHARACTERIZED ORF2 protein|Torque teno tupaia virus (isolate

Query: 2 LCTHKNWCN 10
L +HK+WCN
Sbjct: 12 LLSHKSWCN 20


>sp|YR430_MIMIV|PUTATIVE transcription factor R430|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KLCTHKNWC 9
K+C+H NW
Sbjct: 240 KICSHNNWI 248


>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)

Query: 4 THKNWC 9
T+KNWC
Sbjct: 94 TYKNWC 99


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 2 LCTHKNWCN 10
L TH +W N
Sbjct: 884 LATHNDWAN 892


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 2 LCTHKNWCN 10
L TH +W N
Sbjct: 884 LATHNDWAN 892


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 2 LCTHKNWCN 10
L TH +W N
Sbjct: 884 LATHNDWAN 892


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 2 LCTHKNWCN 10
L TH +W N
Sbjct: 884 LATHNDWAN 892


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 4 THKNWC 9
TH+ WC
Sbjct: 1780 THRGWC 1785


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 2 LCTHKNWCN 10
L TH +W N
Sbjct: 884 LATHTDWAN 892


>sp|Y058_OSHVF|UNCHARACTERIZED protein ORF58|Ostreid herpesvirus 1 (isolate France)

Query: 3 CTHKNW 8
C HK+W
Sbjct: 225 CNHKHW 230


>sp|POLG_SVV1|GENOME polyprotein|Seneca Valley virus (isolate -/United

Query: 1 KLCTHKNWC 9
++ T+K WC
Sbjct: 1660 RVTTYKGWC 1668


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 2 LCTHKNWC 9
LC KN+C
Sbjct: 2283 LCCQKNFC 2290


>sp|ENV_MLVCB|ENVELOPE glycoprotein|Cas-Br-E murine leukemia virus

Query: 1 KLCTHKNWCN 10
K C + WCN
Sbjct: 207 KACKNNGWCN 216


>sp|VS48_TBRVE|SATELLITE RNA 48 kDa protein|Tomato black ring virus (strain

Query: 1 KLCTHKNW 8
K+CTHK +
Sbjct: 332 KVCTHKQY 339


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 3 CTHKNWCN 10
CT K W N
Sbjct: 12 CTGKTWSN 19


>sp|NS1_MPRVN|PUTATIVE non-structural protein 1|Micromonas pusilla reovirus (isolate

Query: 1 KLCTHKNW 8
K+C+ NW
Sbjct: 55 KMCSRMNW 62


>sp|SH_HRSV8|SMALL hydrophobic protein|Human respiratory syncytial virus B

Query: 1 KLCTHKNWCN 10
KL HK +CN
Sbjct: 43 KLSEHKTFCN 52


>sp|SH_HRSV1|SMALL hydrophobic protein|Human respiratory syncytial virus B

Query: 1 KLCTHKNWCN 10
KL HK +CN
Sbjct: 43 KLSEHKTFCN 52


>sp|CAPSD_LDCPR|INNER capsid protein VP1|Lymantria dispar cypovirus 1 (isolate

Query: 4 THKNWCN 10
TH NW N
Sbjct: 305 THVNWLN 311


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 HKNWC 9
+KNWC
Sbjct: 40 YKNWC 44


>sp|POLG_PEV9U|GENOME polyprotein|Porcine enterovirus 9 (strain UKG/410/73)

Query: 2 LCTHKNWCN 10
L TH++W N
Sbjct: 857 LATHEDWEN 865


>sp|POL2_ARMVN|RNA2 polyprotein|Arabis mosaic virus (isolate NW)

Query: 1 KLCTHKNWCN 10
+LC H W N
Sbjct: 717 ELCGHAMWFN 726


>sp|CAPSD_HPVUT|CAPSID protein|High plains virus (isolate Utah

Query: 2 LCTHKNW 8
+C HK W
Sbjct: 120 ICYHKKW 126


>sp|CAPSD_HPVTX|CAPSID protein|High plains virus (isolate Texas

Query: 2 LCTHKNW 8
+C HK W
Sbjct: 120 ICYHKKW 126


>sp|CAPSD_HPVKS|CAPSID protein|High plains virus (isolate Kansas

Query: 2 LCTHKNW 8
+C HK W
Sbjct: 120 ICYHKKW 126


>sp|CAPSD_HPV|CAPSID protein|High plains virus (isolate Idaho

Query: 2 LCTHKNW 8
+C HK W
Sbjct: 120 ICYHKKW 126


>sp|CAPSD_HPVCO|CAPSID protein|High plains virus (isolate Colorado

Query: 2 LCTHKNW 8
+C HK W
Sbjct: 120 ICYHKKW 126


>sp|CASPD_HPVKA|CAPSID protein|High plains virus (isolate Kansas

Query: 2 LCTHKNW 8
+C HK W
Sbjct: 120 ICYHKKW 126


>sp|SH_HRSVB|SMALL hydrophobic protein|Human respiratory syncytial virus B

Query: 1 KLCTHKNWCN 10
KL HK +CN
Sbjct: 43 KLSEHKTFCN 52


>sp|VS48_TBRVS|SATELLITE RNA 48 kDa protein|Tomato black ring virus satellite

Query: 1 KLCTHKNW 8
K+CTHK +
Sbjct: 332 KVCTHKQY 339


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 2 LCTHKNWCN 10
L TH +W N
Sbjct: 884 LATHNDWQN 892


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 2 LCTHKNWCN 10
L TH +W N
Sbjct: 889 LATHTDWQN 897


>sp|ENV_MLVF5|ENVELOPE glycoprotein|Friend murine leukemia virus (isolate

Query: 1 KLCTHKNWCN 10
++C WCN
Sbjct: 210 QVCKDNKWCN 219


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 2 LCTHKNWCN 10
L TH +W N
Sbjct: 882 LATHTDWQN 890


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 2 LCTHKNWCN 10
L TH +W N
Sbjct: 883 LATHTDWQN 891


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 2 LCTHKNWCN 10
L TH +W N
Sbjct: 879 LATHTDWQN 887


>sp|ENV_MLVFP|ENVELOPE glycoprotein|Friend murine leukemia virus (isolate

Query: 1 KLCTHKNWCN 10
++C WCN
Sbjct: 210 QVCKDNKWCN 219


>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 HKNWC 9
+KNWC
Sbjct: 40 YKNWC 44


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 2 LCTHKNWCN 10
L TH +W N
Sbjct: 872 LATHADWQN 880


>sp|VP5_RRSVT|PUTATIVE minor structural protein VP5|Rice ragged stunt virus (isolate

Query: 3 CTHKNW 8
C H NW
Sbjct: 160 CDHANW 165


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 2 LCTHKNWCN 10
L TH +W N
Sbjct: 891 LATHTDWQN 899


>sp|ENV_MLVFF|ENVELOPE glycoprotein|Friend murine leukemia virus (isolate

Query: 1 KLCTHKNWCN 10
++C WCN
Sbjct: 210 QVCKDNKWCN 219


>sp|ENV_MLVMS|ENVELOPE glycoprotein|Moloney murine leukemia virus (isolate

Query: 1 KLCTHKNWCN 10
++C WCN
Sbjct: 207 QVCKDNKWCN 216




59|Sequence|291|300|KNWCNWQITQ

>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 3 WCNW 6
WCNW
Sbjct: 351 WCNW 354


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 3 WCNW 6
WCNW
Sbjct: 351 WCNW 354


>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 3 WCNW 6
WCNW
Sbjct: 351 WCNW 354


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 3 WCNW 6
WCNW
Sbjct: 348 WCNW 351


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 3 WCNW 6
WCNW
Sbjct: 348 WCNW 351


>sp|GP11_BPMU|UNCHARACTERIZED protein gp11|Escherichia phage Mu (Bacteriophage Mu)

Query: 3 WCNWQ 7
WCNW+
Sbjct: 82 WCNWR 86


>sp|NS1AB_ANV1|NON-STRUCTURAL polyprotein 1AB|Avian nephritis virus 1 (ANV-1)

Query: 3 WCNWQI 8
W NWQI
Sbjct: 1023 WNNWQI 1028


>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)

Query: 4 CNWQITQ 10
CNW I++
Sbjct: 470 CNWDISR 476


>sp|P2A_CFMVN|POLYPROTEIN P2A|Cocksfoot mottle virus (isolate Dactylis

Query: 4 CNWQ 7
CNWQ
Sbjct: 506 CNWQ 509


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 KNWCNWQ 7
K W NWQ
Sbjct: 3186 KGWKNWQ 3192


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 KNWCNWQ 7
K W NWQ
Sbjct: 3186 KGWKNWQ 3192


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 KNWCNWQ 7
K W NWQ
Sbjct: 3186 KGWKNWQ 3192


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 KNWCNWQ 7
K W NWQ
Sbjct: 3186 KGWKNWQ 3192


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 KNWCNWQ 7
K W NWQ
Sbjct: 3186 KGWKNWQ 3192


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 3 WCNWQ 7
WC W+
Sbjct: 3206 WCTWK 3210


>sp|L_SBVBH|RNA-DIRECTED RNA polymerase L|Bovine Schmallenberg virus (isolate

Query: 3 WCNWQITQ 10
W NWQ ++
Sbjct: 1831 WNNWQTSR 1838


>sp|VG50_BPMD2|PUTATIVE adenosylcobalamin-dependent ribonucleoside-triphosphate

Query: 2 NWCNWQI 8
+W +WQ+
Sbjct: 286 HWADWQV 292


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 2 NWCNWQITQ 10
+W NWQ +
Sbjct: 1822 SWNNWQTNR 1830


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 3 WCNWQ 7
WC W+
Sbjct: 3206 WCTWK 3210


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 1 KNWCNWQIT 9
KN+ W+IT
Sbjct: 664 KNFTTWKIT 672


>sp|SPI2_VARV|SERINE proteinase inhibitor 2|Variola virus

Query: 1 KNWCN 5
K WCN
Sbjct: 223 KKWCN 227


>sp|SPI2_VAR67|SERINE proteinase inhibitor 2|Variola virus (isolate

Query: 1 KNWCN 5
K WCN
Sbjct: 223 KKWCN 227


>sp|SPI2_VACCW|SERINE proteinase inhibitor 2|Vaccinia virus (strain Western Reserve)

Query: 1 KNWCN 5
K WCN
Sbjct: 223 KKWCN 227


>sp|SPI2_RABPU|SERINE proteinase inhibitor 2|Rabbitpox virus (strain Utrecht) (RPV)

Query: 1 KNWCN 5
K WCN
Sbjct: 223 KKWCN 227


>sp|SPI2_MONPV|SERINE proteinase inhibitor 2|Monkeypox virus (MPXV)

Query: 1 KNWCN 5
K WCN
Sbjct: 223 KKWCN 227


>sp|SPI2B_VACCC|PUTATIVE serine proteinase inhibitor 2|Vaccinia virus (strain Copenhagen)

Query: 1 KNWCN 5
K WCN
Sbjct: 100 KKWCN 104


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 4 CNWQITQ 10
CNWQ+++
Sbjct: 909 CNWQVSR 915


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 4 CNWQITQ 10
CNWQ+++
Sbjct: 909 CNWQVSR 915


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 4 CNWQITQ 10
CNWQ+++
Sbjct: 909 CNWQVSR 915


>sp|RDRP_SHVX|RNA replication protein|Shallot virus X (ShVX)

Query: 2 NWCNWQITQ 10
++C W++T+
Sbjct: 1540 DFCGWRLTR 1548


>sp|COLL4_MIMIV|COLLAGEN-LIKE protein 4|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 CNWQIT 9
CNW +T
Sbjct: 61 CNWLLT 66


>sp|CAPSD_BP234|MAJOR capsid protein|Thermus virus P23-45 (Thermus thermophilus

Query: 1 KNWCNWQITQ 10
+ W WQ+ +
Sbjct: 155 RRWLTWQVMR 164


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 3 WCNWQ 7
W NWQ
Sbjct: 3225 WTNWQ 3229


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 2 NWCNW 6
NW NW
Sbjct: 100 NWMNW 104


>sp|A1_BPSP|MINOR capsid protein A1|Enterobacteria phage SP (Bacteriophage SP)

Query: 2 NWCNW 6
NW NW
Sbjct: 213 NWRNW 217


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 2 NWCNW 6
NW NW
Sbjct: 100 NWMNW 104


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 3 WCNWQ 7
W NWQ
Sbjct: 3223 WSNWQ 3227




60|Sequence|296|305|WQITQDSQET

>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain

Query: 1 WQITQD 6
WQITQ+
Sbjct: 362 WQITQN 367


>sp|ENV_MPLV|ENVELOPE glycoprotein|Myeloproliferative leukemia virus (MpLV)

Query: 1 WQITQDSQET 10
W++T +ET
Sbjct: 49 WEVTNGDRET 58




61|Sequence|301|310|DSQETYNFTL

>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 SQETYNFTL 10
SQ YNFT
Sbjct: 442 SQRVYNFTF 450


>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)

Query: 2 SQETYNFTL 10
SQ YNFT
Sbjct: 442 SQRVYNFTF 450


>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant

Query: 2 SQETYNFTL 10
SQ YNFT
Sbjct: 442 SQRVYNFTF 450


>sp|VP2_POVWU|MINOR capsid protein VP2|WU polyomavirus (WUPyV)

Query: 2 SQETYNF 8
SQ TYNF
Sbjct: 290 SQATYNF 296


>sp|YL246_MIMIV|UNCHARACTERIZED protein L246|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 SQETYNFTL 10
++E YNFTL
Sbjct: 217 NKEKYNFTL 225




62|Sequence|306|315|YNFTLIAENY

>sp|TGB1_BNYVS|MOVEMENT protein TGB1|Beet necrotic yellow vein virus

Query: 1 YNFTLIAENY 10
YNF +IAE Y
Sbjct: 230 YNFPIIAECY 239


>sp|YVIA_VACCC|UNCHARACTERIZED 9.3 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 YNFTLIAENY 10
YNF I++NY
Sbjct: 18 YNFIEISDNY 27




63|Sequence|311|320|IAENYLRKRS

>sp|1101L_ASFPP|PROTEIN MGF 110-1L|African swine fever virus (isolate

Query: 1 IAENYLRKRS 10
+A NY+RKRS
Sbjct: 133 LAVNYIRKRS 142


>sp|1101L_ASFB7|PROTEIN MGF 110-1L|African swine fever virus (strain

Query: 1 IAENYLRKRS 10
+A NY+RKRS
Sbjct: 133 LAVNYIRKRS 142


>sp|GB_SHV21|ENVELOPE glycoprotein B|Saimiriine herpesvirus 2 (strain 11)

Query: 2 AENYLRKRS 10
AE +LRKRS
Sbjct: 788 AETFLRKRS 796


>sp|1101L_ASFM2|PROTEIN MGF 110-1L|African swine fever virus (isolate

Query: 1 IAENYLRKRS 10
+ NY+RKRS
Sbjct: 133 LVANYVRKRS 142


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 4 NYLRKR 9
NYLRKR
Sbjct: 3136 NYLRKR 3141


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 4 NYLRKR 9
NYLRKR
Sbjct: 3134 NYLRKR 3139


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 4 NYLRKR 9
NYLRKR
Sbjct: 3142 NYLRKR 3147


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4 NYLRKR 9
NYLRKR
Sbjct: 3136 NYLRKR 3141


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 4 NYLRKR 9
NYLRKR
Sbjct: 3134 NYLRKR 3139


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 4 NYLRKR 9
NYLRKR
Sbjct: 3142 NYLRKR 3147


>sp|1101L_ASFP4|PROTEIN MGF 110-1L|African swine fever virus (isolate

Query: 1 IAENYLRKRS 10
+ NY+RKRS
Sbjct: 132 LVANYVRKRS 141


>sp|1101L_ASFWA|PROTEIN MGF 110-1L|African swine fever virus (isolate

Query: 1 IAENYLRKRS 10
+ NY+RKRS
Sbjct: 132 LVANYVRKRS 141


>sp|1101L_ASFK5|PROTEIN MGF 110-1L|African swine fever virus (isolate

Query: 4 NYLRKRS 10
NY+RKRS
Sbjct: 136 NYIRKRS 142


>sp|POL1_BAYMG|GENOME polyprotein 1|Barley yellow mosaic virus (isolate

Query: 1 IAENYLRKRS 10
+A NY +KR+
Sbjct: 1524 VATNYTKKRN 1533


>sp|POL1_BAYMY|GENOME polyprotein 1|Barley yellow mosaic virus (isolate

Query: 1 IAENYLRKRS 10
+A NY +KR+
Sbjct: 1523 VATNYTKKRN 1532


>sp|POL1_BAYMJ|GENOME polyprotein 1|Barley yellow mosaic virus (strain

Query: 1 IAENYLRKRS 10
+A NY +KR+
Sbjct: 1523 VATNYTKKRN 1532


>sp|DPOL_CBEPV|DNA polymerase|Choristoneura biennis entomopoxvirus (CbEPV)

Query: 1 IAENYLRKR 9
I ENYL+++
Sbjct: 591 IVENYLKEK 599


>sp|HRF1_NPVLD|HOST range factor 1|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 2 AENYLRK 8
AENYL+K
Sbjct: 207 AENYLKK 213




64|Sequence|316|325|LRKRSVNILF

***** No hits found ******


65|Sequence|321|330|VNILFNLTHR

>sp|VP7_AQRVG|OUTER capsid protein VP7|Aquareovirus G (isolate American grass

Query: 1 VNILFNLTHR 10
V +LFN+THR
Sbjct: 195 VPMLFNMTHR 204


>sp|VP2_RRSVT|OUTER capsid protein VP2|Rice ragged stunt virus (isolate

Query: 1 VNILFNLTH 9
VN L+N+TH
Sbjct: 227 VNFLYNMTH 235


>sp|175R_IIV6|PUTATIVE RING finger protein 175R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 VNILFNLTH 9
VN +FN TH
Sbjct: 145 VNTVFNCTH 153




66|Sequence|326|335|NLTHRVYLMN

>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 4 HRVYLMN 10
HRVY+M+
Sbjct: 941 HRVYIMS 947


>sp|SPI1_MYXVL|SERINE proteinase inhibitor 1|Myxoma virus (strain Lausanne) (MYXV)

Query: 1 NLTHRVYLMN 10
N+T++V +MN
Sbjct: 172 NVTYKVRMMN 181


>sp|MCP_POV01|MAJOR capsid protein|Pyramimonas orientalis virus (PoV01)

Query: 1 NLTHRVYL 8
+L HR+YL
Sbjct: 65 DLIHRIYL 72


>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 NLTHRVYLMN 10
N TH YL+N
Sbjct: 219 NCTHSFYLVN 228


>sp|YR592_MIMIV|PUTATIVE helicase R592|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 THRVYLMN 10
TH V+L+N
Sbjct: 235 THNVFLLN 242




67|Sequence|331|340|VYLMNPFSVN

>sp|Y114_SIRV1|UNCHARACTERIZED protein 114|Sulfolobus islandicus rod-shaped virus 1

Query: 1 VYLMNPFSVN 10
VYL N FS+N
Sbjct: 4 VYLANAFSIN 13


>sp|MU2_REOVD|MICROTUBULE-ASSOCIATED protein mu-2|Reovirus type 3 (strain Dearing)

Query: 2 YLMNPFSV 9
YLMNP SV
Sbjct: 370 YLMNPSSV 377


>sp|Y457_ATV|TNPB-LIKE protein ORF457|Acidianus two-tailed virus (ATV)

Query: 1 VYLMNPFSV 9
+YL NPF++
Sbjct: 340 IYLGNPFNI 348


>sp|GL_HHV2H|ENVELOPE glycoprotein L|Human herpesvirus 2 (strain HG52)

Query: 2 YLMNPF 7
YL+NPF
Sbjct: 92 YLVNPF 97


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 2 YLMNPFSVN 10
Y++NP +VN
Sbjct: 1705 YVLNPEAVN 1713


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 2 YLMNPFSVN 10
Y++NP +VN
Sbjct: 1795 YVLNPEAVN 1803


>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 2 YLMNPFSVN 10
Y++NP +VN
Sbjct: 1714 YVLNPEAVN 1722


>sp|CAPSH_ADEM1|HEXON protein|Murine adenovirus A serotype 1

Query: 1 VYLMNPFSV 9
VYL +PFS
Sbjct: 896 VYLRSPFSA 904


>sp|CAPSH_ADECU|HEXON protein|Canine adenovirus serotype 1 (strain

Query: 1 VYLMNPFSVN 10
VYL PFS
Sbjct: 5 VYLRTPFSAG 14


>sp|MU2_REOVL|MICROTUBULE-ASSOCIATED protein mu-2|Reovirus type 1 (strain Lang)

Query: 2 YLMNPFSV 9
YL+NP SV
Sbjct: 370 YLINPSSV 377


>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2

Query: 1 VYLMNPFSV 9
VYL PFS
Sbjct: 955 VYLRTPFSA 963


>sp|CAPSH_ADEP3|HEXON protein|Porcine adenovirus A serotype 3

Query: 1 VYLMNPFSV 9
VYL PFS
Sbjct: 926 VYLRTPFSA 934


>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5

Query: 1 VYLMNPFSV 9
VYL PFS
Sbjct: 939 VYLRTPFSA 947


>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7

Query: 1 VYLMNPFSV 9
VYL PFS
Sbjct: 924 VYLRTPFSA 932


>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9

Query: 1 VYLMNPFSV 9
VYL PFS
Sbjct: 930 VYLRTPFSA 938


>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12

Query: 1 VYLMNPFSV 9
VYL PFS
Sbjct: 906 VYLRTPFSA 914


>sp|CAPSH_ADEB3|HEXON protein|Bovine adenovirus B serotype 3

Query: 1 VYLMNPFSV 9
VYL PFS
Sbjct: 898 VYLRTPFSA 906


>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41

Query: 1 VYLMNPFSV 9
VYL PFS
Sbjct: 912 VYLRTPFSA 920


>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3

Query: 1 VYLMNPFSV 9
VYL PFS
Sbjct: 931 VYLRTPFSA 939


>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16

Query: 1 VYLMNPFSV 9
VYL PFS
Sbjct: 927 VYLRTPFSA 935


>sp|CAPSH_ADECR|HEXON protein|Canine adenovirus serotype 1 (strain

Query: 1 VYLMNPFSV 9
VYL PFS
Sbjct: 892 VYLRTPFSA 900


>sp|CAPSH_ADECC|HEXON protein|Canine adenovirus serotype 1 (strain

Query: 1 VYLMNPFSV 9
VYL PFS
Sbjct: 892 VYLRTPFSA 900


>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40

Query: 1 VYLMNPFSV 9
VYL PFS
Sbjct: 910 VYLRTPFSA 918


>sp|QIN_AVIS3|TRANSFORMING protein Qin|Avian sarcoma virus (strain 31)

Query: 1 VYLMNPFSVN 10
Y +NP SVN
Sbjct: 361 TYSLNPCSVN 370




68|Sequence|336|345|PFSVNFENVN

>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United

Query: 1 PFSVNFENV 9
P+S NFE V
Sbjct: 976 PYSFNFETV 984


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 1 PFSVNFENV 9
P+S NFE V
Sbjct: 976 PYSFNFETV 984


>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)

Query: 3 SVNFENVN 10
S+NFEN N
Sbjct: 385 SINFENFN 392


>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant

Query: 3 SVNFENVN 10
S+NFEN N
Sbjct: 385 SINFENFN 392


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 1 PFSVNFENVN 10
PFS +F NV+
Sbjct: 90 PFSPDFSNVD 99


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2 FSVNFENVN 10
SV FEN+N
Sbjct: 3137 LSVEFENLN 3145


>sp|NCAP_RYSV|NUCLEOPROTEIN yellow stunt virus (RYSV)

Query: 3 SVNFENVN 10
+VN++NVN
Sbjct: 300 AVNYDNVN 307


>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)

Query: 2 FSVNFENVN 10
FS+N +N+N
Sbjct: 245 FSINIQNIN 253


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 1 PFSVNFENVN 10
PFS +NVN
Sbjct: 691 PFSAYVDNVN 700


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 PFSVNFENVN 10
PFS +NVN
Sbjct: 691 PFSAYVDNVN 700


>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus

Query: 1 PFSVNFEN 8
P+S+NF N
Sbjct: 521 PYSLNFGN 528


>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain

Query: 1 PFSVNFEN 8
P+S+NF N
Sbjct: 521 PYSLNFGN 528


>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate

Query: 1 PFSVNFEN 8
P+S+NF N
Sbjct: 521 PYSLNFGN 528


>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)

Query: 1 PFSVNFEN 8
P+S+NF N
Sbjct: 521 PYSLNFGN 528


>sp|PG039_VACCC|INTERFERON antagonist OPG040|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 FSVNFENV 9
+SVN ENV
Sbjct: 221 YSVNLENV 228


>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 SVNFENVN 10
S+NF+N N
Sbjct: 385 SINFDNFN 392




69|Sequence|341|350|FENVNATNAI

>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 FENVNAT 7
+ENVNAT
Sbjct: 979 WENVNAT 985


>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain

Query: 1 FENVNATNA 9
F+N+++TN+
Sbjct: 467 FQNIDSTNS 475




70|Sequence|346|355|ATNAIMTWKV

>sp|PRO_MMTVB|GAG-PRO polyprotein|Mouse mammary tumor virus (strain

Query: 2 TNAIMTWK 9
TNA++ W+
Sbjct: 396 TNAVLAWR 403


>sp|PRO_MMTVC|GAG-PRO polyprotein|Mouse mammary tumor virus (strain

Query: 2 TNAIMTWK 9
TNA++ W+
Sbjct: 396 TNAVLAWR 403


>sp|GAG_MMTVB|GAG polyprotein|Mouse mammary tumor virus (strain

Query: 2 TNAIMTWK 9
TNA++ W+
Sbjct: 396 TNAVLAWR 403


>sp|POL_MMTVB|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 2 TNAIMTWK 9
TNA++ W+
Sbjct: 396 TNAVLAWR 403


>sp|GAG_MMTVC|GAG polyprotein|Mouse mammary tumor virus (strain

Query: 2 TNAIMTWK 9
TNA++ W+
Sbjct: 396 TNAVLAWR 403


>sp|POL_MMTVC|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 2 TNAIMTWK 9
TNA++ W+
Sbjct: 396 TNAVLAWR 403


>sp|Y326A_ATV|STRUCTURAL protein ORF326a|Acidianus two-tailed virus (ATV)

Query: 2 TNAIMTWK 9
TNA M WK
Sbjct: 161 TNAKMPWK 168


>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)

Query: 2 TNAIMTWK 9
T A+M WK
Sbjct: 284 TTALMNWK 291


>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)

Query: 2 TNAIMTWK 9
T A+M WK
Sbjct: 282 TTALMNWK 289


>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus

Query: 1 ATNAIMTW 8
ATN I TW
Sbjct: 2063 ATNTIETW 2070




71|Sequence|351|360|MTWKVHSIRN

>sp|VP03_EHV2|PROBABLE membrane antigen 3|Equine herpesvirus 2 (strain 86/87)

Query: 3 WKVHSIR 9
W+ HS+R
Sbjct: 1010 WRSHSVR 1016


>sp|VF134_ASFWA|EARLY transcription factor large subunit|African swine fever virus

Query: 3 WKVHSIRN 10
W +H ++N
Sbjct: 978 WDIHDVKN 985


>sp|ETFL_ASFM2|EARLY transcription factor large subunit|African swine fever virus

Query: 3 WKVHSIRN 10
W +H ++N
Sbjct: 978 WDIHDVKN 985


>sp|ETFL_ASFK5|EARLY transcription factor large subunit|African swine fever virus

Query: 3 WKVHSIRN 10
W +H ++N
Sbjct: 978 WDIHDVKN 985


>sp|ETFL_ASFB7|EARLY transcription factor large subunit|African swine fever virus

Query: 3 WKVHSIRN 10
W +H ++N
Sbjct: 978 WDIHDVKN 985


>sp|EFTL_ASFP4|EARLY transcription factor large subunit|African swine fever virus

Query: 3 WKVHSIRN 10
W +H ++N
Sbjct: 978 WDIHDVKN 985


>sp|POL_FENV1|POL polyprotein|Feline endogenous virus ECE1

Query: 2 TWKVHSIRN 10
TWK+H N
Sbjct: 1029 TWKLHRSEN 1037


>sp|UL87_EHV2|GENE 24 protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 MTWKVHSIRN 10
++WK+H +N
Sbjct: 759 LSWKLHLHKN 768




72|Sequence|356|365|HSIRNNFTYL

>sp|RDRP_SCVLB|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-BC

Query: 3 IRNNFTY 9
IR+NFTY
Sbjct: 836 IRDNFTY 842


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 1 HSIRNNFTY 9
H R NFTY
Sbjct: 2603 HGNRTNFTY 2611


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 HSIRNNFTY 9
H R NFTY
Sbjct: 2603 HGNRTNFTY 2611


>sp|RDRP_SHMV|REPLICASE large subunit|Sunn-hemp mosaic virus (SHMV) (TMV

Query: 1 HSIRNNFTYL 10
HS RN F Y+
Sbjct: 283 HSFRNVFEYV 292


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 1 HSIRNNFTY 9
H R NFTY
Sbjct: 2721 HGNRTNFTY 2729


>sp|CAPSD_PCV1|CAPSID protein|Porcine circovirus 1 (PCV1)

Query: 1 HSIRNNFTY 9
H+IR FTY
Sbjct: 149 HTIRQPFTY 157


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 HSIRNNFTY 9
H R NFTY
Sbjct: 2721 HGNRTNFTY 2729


>sp|YL649_MIMIV|UNCHARACTERIZED protein L649|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 IRNNFTYL 10
I+NN TYL
Sbjct: 153 IKNNLTYL 160


>sp|GLYCO_TIBVC|GLYCOPROTEIN virus (strain CS132) (TIBV)

Query: 1 HSIRNNFT 8
H IR NFT
Sbjct: 532 HEIRKNFT 539


>sp|NP03_VZVD|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Dumas)

Query: 1 HSIRNNFT 8
HS++N+FT
Sbjct: 37 HSVQNDFT 44


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 1 HSIRNNFTY 9
HSIR+ F Y
Sbjct: 599 HSIRSVFAY 607


>sp|TUBE_BPT5|TAIL tube protein pb6|Escherichia phage T5 (Enterobacteria phage

Query: 2 SIRNNFTYL 10
+I NN TYL
Sbjct: 232 TINNNITYL 240


>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 RNNFTY 9
RNNFTY
Sbjct: 8 RNNFTY 13


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 1 HSIRNNFT 8
H++RN FT
Sbjct: 592 HTLRNKFT 599


>sp|Y094_OSHVF|UNCHARACTERIZED protein ORF94|Ostreid herpesvirus 1 (isolate France)

Query: 2 SIRNNFTYL 10
SI+N FTY+
Sbjct: 190 SIKNIFTYV 198


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1 HSIRNNFTYL 10
HSIR N+ L
Sbjct: 1737 HSIRRNYPKL 1746


>sp|CAPSD_BPKPP|MAJOR capsid protein|Pseudomonas phage KPP10 (Bacteriophage KPP10)

Query: 2 SIRNNFTY 9
S++NNF Y
Sbjct: 6 SLQNNFEY 13


>sp|YL031_MIMIV|UNCHARACTERIZED protein L31|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 SIRNNFTYL 10
I NNFT+L
Sbjct: 17 EINNNFTWL 25




73|Sequence|361|370|NFTYLCQIEL

>sp|CVC2_EHV1V|CAPSID vertex component 2|Equine herpesvirus 1 (strain V592)

Query: 1 NFTYLCQ 7
NFT+LC+
Sbjct: 445 NFTFLCE 451


>sp|CVC2_EHV1B|CAPSID vertex component 2|Equine herpesvirus 1 (strain Ab4p)

Query: 1 NFTYLCQ 7
NFT+LC+
Sbjct: 445 NFTFLCE 451


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 NFTYLCQIEL 10
NF Y+ Q+EL
Sbjct: 3452 NFVYMHQMEL 3461


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 NFTYLCQIEL 10
NF Y+ Q+EL
Sbjct: 3459 NFVYMHQMEL 3468


>sp|GLYC_BRSV4|MAJOR surface glycoprotein G|Bovine respiratory syncytial virus (strain

Query: 5 LCQIEL 10
LCQIEL
Sbjct: 185 LCQIEL 190


>sp|GLYC_BRSV1|MAJOR surface glycoprotein G|Bovine respiratory syncytial virus (strain

Query: 5 LCQIEL 10
LCQIEL
Sbjct: 185 LCQIEL 190


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 NFTYLCQIEL 10
NF Y+ Q+EL
Sbjct: 3452 NFVYMHQMEL 3461


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 NFTYLCQIEL 10
NF Y+ Q+EL
Sbjct: 3459 NFVYMHQMEL 3468


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 NFTYLCQIEL 10
NF Y+ Q+EL
Sbjct: 3499 NFCYMHQMEL 3508


>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)

Query: 2 FTYLCQIEL 10
+ Y+C +EL
Sbjct: 1128 YEYMCSVEL 1136


>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)

Query: 2 FTYLCQIEL 10
+ Y+C +EL
Sbjct: 1128 YEYMCSVEL 1136


>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)

Query: 2 FTYLCQIEL 10
+ Y+C +EL
Sbjct: 1128 YEYMCSVEL 1136


>sp|L_SENDZ|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Z) (SeV)

Query: 2 FTYLCQIEL 10
+ Y+C +EL
Sbjct: 1128 YEYMCSVEL 1136


>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)

Query: 2 FTYLCQIEL 10
+ Y+C +EL
Sbjct: 1128 YEYMCSVEL 1136


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 NFTYLCQIEL 10
NF Y+ Q+EL
Sbjct: 3408 NFCYMHQMEL 3417


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 NFTYLCQIEL 10
NF Y+ Q+EL
Sbjct: 3499 NFCYMHQMEL 3508


>sp|Y114_NPVOP|UNCHARACTERIZED 48.2 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 NFTYLCQIE 9
NFTY C+++
Sbjct: 117 NFTYNCRLD 125


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 NFTYLCQIEL 10
NF Y+ Q+EL
Sbjct: 3408 NFCYMHQMEL 3417


Query: 2 FTYLCQI 8
FTYLC +
Sbjct: 6925 FTYLCNL 6931


>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)

Query: 2 FTYLC 6
FTYLC
Sbjct: 586 FTYLC 590


>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)

Query: 2 FTYLC 6
FTYLC
Sbjct: 586 FTYLC 590


>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)

Query: 2 FTYLC 6
FTYLC
Sbjct: 586 FTYLC 590


>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)

Query: 2 FTYLC 6
FTYLC
Sbjct: 586 FTYLC 590


>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)

Query: 2 FTYLC 6
FTYLC
Sbjct: 586 FTYLC 590


>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)

Query: 2 FTYLC 6
FTYLC
Sbjct: 586 FTYLC 590


>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)

Query: 2 FTYLC 6
FTYLC
Sbjct: 586 FTYLC 590


>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)

Query: 2 FTYLC 6
FTYLC
Sbjct: 586 FTYLC 590


>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)

Query: 2 FTYLC 6
FTYLC
Sbjct: 586 FTYLC 590


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 FTYLCQI 8
FTYLC +
Sbjct: 7031 FTYLCHL 7037


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 FTYLCQI 8
FTYLC +
Sbjct: 7027 FTYLCHL 7033


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 2 FTYLCQI 8
FTYLC +
Sbjct: 6975 FTYLCHL 6981


>sp|LTP_PSHV1|LARGE tegument protein deneddylase|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 NFTYLCQIEL 10
+ TY C+++L
Sbjct: 1992 HLTYFCRLDL 2001


>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])

Query: 1 NFTYLCQ 7
NF+++CQ
Sbjct: 139 NFSFICQ 145


>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])

Query: 1 NFTYLCQ 7
NF+++CQ
Sbjct: 139 NFSFICQ 145


>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)

Query: 1 NFTYLCQ 7
NF+++CQ
Sbjct: 139 NFSFICQ 145


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 2 FTYLCQIEL 10
F YL QIEL
Sbjct: 3098 FCYLHQIEL 3106


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2 FTYLCQIEL 10
F YL QIEL
Sbjct: 3098 FCYLHQIEL 3106


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 FTYLC 6
FTYLC
Sbjct: 6923 FTYLC 6927


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 FTYLC 6
FTYLC
Sbjct: 6925 FTYLC 6929


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 FTYLC 6
FTYLC
Sbjct: 6919 FTYLC 6923


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 FTYLC 6
FTYLC
Sbjct: 6931 FTYLC 6935




74|Sequence|366|375|CQIELHGEGK

>sp|TCB_FLV|VIRAL T-cell receptor beta chain-like|Feline leukemia virus

Query: 1 CQIELHGEGK 10
CQ++ HG GK
Sbjct: 240 CQVQFHGLGK 249


>sp|VMT8_MYXVL|KELCH repeat protein M-T8|Myxoma virus (strain Lausanne) (MYXV)

Query: 1 CQIELHGEGK 10
C +E+ EGK
Sbjct: 16 CDVEIVAEGK 25


>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 1 CQIELHGEGK 10
CQ+E EG+
Sbjct: 2050 CQLENESEGR 2059


>sp|NS2_BANNV|NON-STRUCTURAL protein 2|Banna virus (BAV)

Query: 2 QIELHGE 8
+IELHG+
Sbjct: 98 EIELHGD 104




75|Sequence|371|380|HGEGKMMQYN

>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 3 EGKMMQYN 10
EGK M+YN
Sbjct: 1559 EGKKMRYN 1566


>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K+M+Y+
Sbjct: 649 HGPAKIMEYD 658


>sp|041R_FRG3G|UNCHARACTERIZED protein 041R|Frog virus 3 (isolate Goorha)

Query: 3 EGKMMQY 9
EGK MQY
Sbjct: 1154 EGKPMQY 1160


>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKTMEYD 658


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 3 EGKMMQYN 10
+GKM +YN
Sbjct: 1030 DGKMYKYN 1037


>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKTMEYD 658


>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKTMEYD 658


>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKTMEYD 658


>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKTMEYD 658


>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus

Query: 1 HGEGKMMQYN 10
+G GK++ YN
Sbjct: 439 YGSGKIVLYN 448


>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate

Query: 1 HGEGKMMQYN 10
+G GK++ YN
Sbjct: 439 YGSGKIVLYN 448


>sp|MCEL_VACCW|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Western Reserve)

Query: 1 HGEGKMMQYN 10
+G GK++ YN
Sbjct: 439 YGSGKIVLYN 448


>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)

Query: 1 HGEGKMMQYN 10
+G GK++ YN
Sbjct: 439 YGSGKIVLYN 448


>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 HGEGKMMQYN 10
+G GK++ YN
Sbjct: 439 YGSGKIVLYN 448


>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 1 HGEGKMMQYN 10
+G GK++ YN
Sbjct: 439 YGSGKIVLYN 448


>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)

Query: 1 HGEGKMMQYN 10
+G GK++ YN
Sbjct: 439 YGSGKIVLYN 448


>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /

Query: 1 HGEGKMMQYN 10
+G GK++ YN
Sbjct: 439 YGSGKIVLYN 448


>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)

Query: 1 HGEGKMMQYN 10
+G GK++ YN
Sbjct: 439 YGSGKIVLYN 448


>sp|MCEL_CAMPS|MRNA-CAPPING enzyme catalytic subunit|Camelpox virus (strain CMS)

Query: 1 HGEGKMMQYN 10
+G GK++ YN
Sbjct: 439 YGSGKIVLYN 448


>sp|MCEL_CAMPM|MRNA-CAPPING enzyme catalytic subunit|Camelpox virus (strain M-96)

Query: 1 HGEGKMMQYN 10
+G GK++ YN
Sbjct: 439 YGSGKIVLYN 448


>sp|BNRDF_BPSPB|RIBONUCLEOSIDE-DIPHOSPHATE reductase subunit beta|Bacillus phage SPbeta (Bacillus phage

Query: 1 HGEGKMMQ 8
+G+GK+MQ
Sbjct: 179 YGQGKLMQ 186


>sp|MYBE_AVILE|P135GAG-MYB-ETS-TRANSFORMING protein|Avian leukemia virus E26

Query: 1 HGEGKMMQY 9
HG +MM Y
Sbjct: 177 HGTSEMMSY 185


>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I83A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I83A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I82A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 53 HGPAKNMEYD 62


>sp|RDRP_I79A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Grey

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I66A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I49A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I68A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I56A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I56A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I86A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I80AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I80A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I77AF|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I66A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I78AC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKSMEYD 658


>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKNMEYD 658


>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKNMEYD 658


>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKNMEYD 658


>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKNMEYD 658


>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKNMEYD 658


>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKNMEYD 658


>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1 HGEGKMMQYN 10
HG K M+Y+
Sbjct: 649 HGPAKNMEYD 658




76|Sequence|376|385|MMQYNVSIKV

***** No hits found ******


77|Sequence|381|390|VSIKVNGEYF

>sp|V236_FOWPN|UNCHARACTERIZED protein FPV236|Fowlpox virus (strain NVSL) (FPV)

Query: 3 IKVNGEY 9
IK+NGEY
Sbjct: 93 IKINGEY 99


>sp|RDRP_MPRVN|RNA-DIRECTED RNA polymerase VP2|Micromonas pusilla reovirus (isolate

Query: 1 VSIKVNGEY 9
+++K+NG+Y
Sbjct: 153 MNVKINGDY 161


>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12

Query: 5 VNGEYF 10
+NGEYF
Sbjct: 384 MNGEYF 389


>sp|Y289_AFV2P|PUTATIVE transmembrane protein ORF289|Acidianus filamentous virus 2 (isolate

Query: 1 VSIKVNGE 8
VSI VNGE
Sbjct: 220 VSIVVNGE 227


>sp|SPIKE_IBVB|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 3 IKVNGEYF 10
I+VNG Y+
Sbjct: 976 IQVNGSYY 983




78|Sequence|386|395|NGEYFLSELE

>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 1 NGEYFLSELE 10
N YFL ELE
Sbjct: 93 NCNYFLEELE 102


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 1 NGEYFLSELE 10
N YFL ELE
Sbjct: 93 NCNYFLEELE 102


>sp|R1A_GLRV3|REPLICASE protein 1a|Grapevine leafroll-associated virus 3 (isolate

Query: 1 NGEYFLSELE 10
NGE +L EL+
Sbjct: 628 NGEVYLEELD 637


>sp|R1AB_GLRV3|REPLICASE polyprotein 1ab|Grapevine leafroll-associated virus 3 (isolate

Query: 1 NGEYFLSELE 10
NGE +L EL+
Sbjct: 628 NGEVYLEELD 637


>sp|SPIK2_ADEG1|FIBER protein 2|Fowl adenovirus A serotype 1

Query: 1 NGEYFLSEL 9
NG YFL ++
Sbjct: 235 NGSYFLQQI 243


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 NGEYFLSELE 10
N YFL EL+
Sbjct: 93 NCNYFLEELD 102


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 NGEYFLSELE 10
N YFL EL+
Sbjct: 93 NCNYFLEELD 102


>sp|A1_BPT5|PROTEIN A1|Escherichia phage T5 (Enterobacteria phage

Query: 1 NGEYFLSELE 10
+GE+F+ +LE
Sbjct: 261 DGEFFVRQLE 270


>sp|EA59_LAMBD|PROTEIN ea59|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 NGEYFLSE 8
N EYF SE
Sbjct: 217 NNEYFFSE 224




79|Sequence|391|400|LSELEPATEY

>sp|RDRP_ICRSV|RNA replication protein|Indian citrus ringspot virus (isolate

Query: 1 LSELEPATEY 10
+S L+PAT+Y
Sbjct: 1047 ISTLDPATDY 1056


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 1 LSELEPA 7
LSE+EPA
Sbjct: 2216 LSEIEPA 2222


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 1 LSELEPA 7
LSE+EPA
Sbjct: 2216 LSEIEPA 2222


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 1 LSELEPA 7
LSE+EPA
Sbjct: 2212 LSEIEPA 2218


>sp|GE_BHV1S|ENVELOPE glycoprotein E|Bovine herpesvirus 1.2 (strain ST)

Query: 1 LSELEPATE 9
++E EPATE
Sbjct: 25 MAEAEPATE 33


>sp|FPS_FUJSV|TYROSINE-PROTEIN kinase transforming protein Fps|Fujinami sarcoma virus (FSV)

Query: 4 LEPATEY 10
++PATEY
Sbjct: 308 IDPATEY 314




80|Sequence|396|405|PATEYMARVR

>sp|T3RE_BPP1|TYPE III restriction-modification enzyme EcoPI|Escherichia phage P1

Query: 1 PATEYMARVR 10
P EYM RV+
Sbjct: 539 PVNEYMCRVK 548


>sp|GL_HHV11|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain 17)

Query: 1 PATEYMARVR 10
P+TEY+ R R
Sbjct: 22 PSTEYVIRSR 31


>sp|RDRP_PVXX3|RNA replication protein|Potato virus X (strain X3)

Query: 1 PATEYMAR 8
PATEY ++
Sbjct: 849 PATEYFSK 856


>sp|RDRP_PVX|RNA replication protein|Potato virus X (PVX)

Query: 1 PATEYMAR 8
PATEY ++
Sbjct: 849 PATEYFSK 856




81|Sequence|401|410|MARVRCADAS

>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus

Query: 4 VRCADA 9
VRCADA
Sbjct: 1413 VRCADA 1418


>sp|DPO13_BPK64|DEPOLYMERASE, capsule K21-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 2 ARVRCADAS 10
ARV+C D +
Sbjct: 488 ARVKCVDTA 496


>sp|VG59_ICHVA|PUTATIVE membrane protein ORF59|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 RVRCADAS 10
R+ CADA+
Sbjct: 166 RITCADAN 173




82|Sequence|406|415|CADASHFWKW

>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK

Query: 3 DASHFWK 9
D SHFWK
Sbjct: 2184 DNSHFWK 2190


>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)

Query: 3 DASHFWK 9
D SHFWK
Sbjct: 2184 DNSHFWK 2190


>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)

Query: 3 DASHFWK 9
D SHFWK
Sbjct: 2184 DNSHFWK 2190


>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)

Query: 3 DASHFWK 9
D SHFWK
Sbjct: 2185 DNSHFWK 2191


>sp|POLG_PPVEA|GENOME polyprotein|Plum pox potyvirus (strain El

Query: 3 DASHFWK 9
D SHFWK
Sbjct: 560 DNSHFWK 566


>sp|VP3_BTV2A|CORE protein VP3|Bluetongue virus 2 (isolate USA)

Query: 2 ADASHFWK 9
A SHFWK
Sbjct: 631 ARPSHFWK 638


>sp|VP3_BTV1S|CORE protein VP3|Bluetongue virus 1 (isolate South

Query: 2 ADASHFWK 9
A SHFWK
Sbjct: 631 ARPSHFWK 638


>sp|VP3_BTV1A|CORE protein VP3|Bluetongue virus 1 (isolate Australia)

Query: 2 ADASHFWK 9
A SHFWK
Sbjct: 631 ARPSHFWK 638


>sp|VP3_BTV17|CORE protein VP3|Bluetongue virus 17 (isolate USA)

Query: 2 ADASHFWK 9
A SHFWK
Sbjct: 631 ARPSHFWK 638


>sp|VP3_BTV11|CORE protein VP3|Bluetongue virus 11 (isolate USA)

Query: 2 ADASHFWK 9
A SHFWK
Sbjct: 631 ARPSHFWK 638


>sp|VP3_BTV10|CORE protein VP3|Bluetongue virus 10 (isolate USA)

Query: 2 ADASHFWK 9
A SHFWK
Sbjct: 631 ARPSHFWK 638


>sp|CAPSD_BTV13|INNER capsid protein VP3|Bluetongue virus 13 (isolate USA)

Query: 2 ADASHFWK 9
A SHFWK
Sbjct: 631 ARPSHFWK 638


>sp|POL2_BAYMY|GENOME polyprotein 2|Barley yellow mosaic virus (isolate

Query: 1 CADASH 6
CADASH
Sbjct: 104 CADASH 109


>sp|POL2_BAYMJ|GENOME polyprotein 2|Barley yellow mosaic virus (strain

Query: 1 CADASH 6
CADASH
Sbjct: 104 CADASH 109


>sp|POL2_BAYMG|GENOME polyprotein 2|Barley yellow mosaic virus (isolate

Query: 1 CADASH 6
CADASH
Sbjct: 104 CADASH 109


>sp|CBL_MLVCN|TRANSFORMING protein cbl|Cas-NS-1 murine leukemia virus

Query: 2 ADASHFWK 9
ADA+ FW+
Sbjct: 214 ADAAEFWR 221


>sp|VE2_HPV35|REGULATORY protein E2|Human papillomavirus 35

Query: 3 DASHFWKW 10
DAS W+W
Sbjct: 316 DASSTWRW 323


>sp|L_CDVO|RNA-DIRECTED RNA polymerase L|Canine distemper virus (strain Onderstepoort)

Query: 1 CADASHFWKW 10
CA SH + W
Sbjct: 1180 CASGSHNYGW 1189


>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)

Query: 1 CADASHF 7
C D SHF
Sbjct: 340 CVDTSHF 346


>sp|VP3_EHDVA|CORE protein VP3|Epizootic hemorrhagic disease virus 2

Query: 2 ADASHFWK 9
A +HFWK
Sbjct: 629 ARPTHFWK 636


>sp|VP3_EHDV1|CORE protein VP3|Epizootic hemorrhagic disease virus 1

Query: 2 ADASHFWK 9
A +HFWK
Sbjct: 629 ARPTHFWK 636


>sp|VE8E2_HPV35|PROTEIN E8^E2C|Human papillomavirus 35

Query: 3 DASHFWKW 10
DAS W+W
Sbjct: 127 DASSTWRW 134


>sp|RAF_MSV36|SERINE/THREONINE-PROTEIN kinase-transforming protein raf|Murine sarcoma virus 3611

Query: 3 DASHFWK 9
D+S++WK
Sbjct: 12 DSSYYWK 18


>sp|END4_MIMIV|PUTATIVE endonuclease 4|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 CADASHFW 8
C D H W
Sbjct: 200 CIDTCHIW 207


>sp|APE_ASFP4|PROBABLE AP endonuclease|African swine fever virus (isolate

Query: 1 CADASHFW 8
C D +H W
Sbjct: 177 CIDTAHIW 184


>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41

Query: 2 ADASHFW 8
++ SHFW
Sbjct: 469 SNGSHFW 475


>sp|APE_ASFWA|PROBABLE AP endonuclease|African swine fever virus (isolate

Query: 1 CADASHFW 8
C D +H W
Sbjct: 177 CIDTAHIW 184


>sp|APE_ASFB7|PROBABLE AP endonuclease|African swine fever virus (strain

Query: 1 CADASHFW 8
C D +H W
Sbjct: 177 CIDTAHIW 184


>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1

Query: 3 DASHFWK 9
DA H+W+
Sbjct: 671 DAEHYWR 677


>sp|UL127_HCMVA|UNCHARACTERIZED protein UL127|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 SHFWK 9
+HFWK
Sbjct: 58 NHFWK 62


>sp|APE_ASFM2|PROBABLE AP endonuclease|African swine fever virus (isolate

Query: 1 CADASHFW 8
C D +H W
Sbjct: 177 CIDTAHIW 184


>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 4 ASHFWKW 10
A+HF KW
Sbjct: 2063 ATHFPKW 2069


>sp|APE_ASFK5|PROBABLE AP endonuclease|African swine fever virus (isolate

Query: 1 CADASHFW 8
C D +H W
Sbjct: 177 CIDTAHIW 184


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 CADASHF 7
C DAS+F
Sbjct: 4620 CCDASYF 4626


>sp|VPA_BP186|REPLICATION gene A protein|Escherichia phage 186 (Bacteriophage 186)

Query: 3 DASHFWKW 10
DA+H+ +W
Sbjct: 522 DAAHYGRW 529


>sp|US06_HCMVT|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Towne)

Query: 1 CADASHFWK 9
C DA WK
Sbjct: 57 CTDADDSWK 65


>sp|US06_HCMVA|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain AD169)

Query: 1 CADASHFWK 9
C DA WK
Sbjct: 57 CTDADDSWK 65


>sp|US06_HCMVM|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Merlin)

Query: 1 CADASHFWK 9
C DA WK
Sbjct: 56 CTDADDSWK 64


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 CADASHFWKW 10
C D SH W
Sbjct: 4155 CTDKSHKHPW 4164




83|Sequence|411|420|HFWKWSEWSG

>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1

Query: 1 HFWKWS 6
H WKWS
Sbjct: 12 HLWKWS 17


>sp|VF213_IIV6|TRANSMEMBRANE protein 213R|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 WKWSEWS 9
WK SEW+
Sbjct: 180 WKASEWT 186


>sp|P1_BPPH6|MAJOR inner protein P1|Pseudomonas phage phi6 (Bacteriophage phi-6)

Query: 1 HFWKWSEWS 9
H W W E S
Sbjct: 576 HIWPWHEAS 584


>sp|VNS2_AHSV|NON-STRUCTURAL protein NS2|African horse sickness virus (AHSV)

Query: 4 KWSEWS 9
+W EWS
Sbjct: 92 RWEEWS 97


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 1 HFWKWSE-WS 9
H W+W E W+
Sbjct: 1680 HKWQWQEAWN 1689


>sp|PRIM_ASFM2|PUTATIVE helicase/primase complex protein|African swine fever virus

Query: 2 FWKW 5
FWKW
Sbjct: 49 FWKW 52


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 1 HFWKWSE-WS 9
H W+W E W+
Sbjct: 1680 HKWQWQEAWN 1689


>sp|POLS_ABPVR|STRUCTURAL polyprotein|Acute bee paralysis virus (strain

Query: 3 WKWSE 7
WKW+E
Sbjct: 656 WKWAE 660


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 1 HFWKWSEW 8
+FW+W+ +
Sbjct: 329 NFWQWTTY 336


>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum

Query: 4 KWSEWSG 10
KW WSG
Sbjct: 1047 KWISWSG 1053


>sp|POLN_ELV|NON-STRUCTURAL replication polyprotein|Erysimum latent virus (ELV)

Query: 1 HFWKWSEW 8
H W++S W
Sbjct: 919 HNWRFSTW 926


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 2 FWKWSEWSG 10
++ W +WSG
Sbjct: 937 YFGWEDWSG 945


>sp|VP7_RRSVT|MICROTUBULE-ASSOCIATED protein VP7|Rice ragged stunt virus (isolate

Query: 4 KWSEW 8
KW+EW
Sbjct: 371 KWAEW 375


>sp|Y013_NPVAC|UNCHARACTERIZED 38.7 kDa protein in|Autographa californica nuclear polyhedrosis

Query: 2 FWKWSEWSG 10
W W WSG
Sbjct: 5 LWNWWMWSG 13


>sp|POLN_ABPVR|REPLICASE polyprotein|Acute bee paralysis virus (strain

Query: 2 FWKW 5
FWKW
Sbjct: 920 FWKW 923


>sp|CAPSD_SOCMV|CAPSID protein|Soybean chlorotic mottle virus

Query: 1 HFWKWS 6
+FWKW+
Sbjct: 349 NFWKWN 354


>sp|PORTL_BPPCD|PORTAL protein|Clostridium phage phiCD119 (strain Clostridium

Query: 1 HFWKWSEWSG 10
H+W E+SG
Sbjct: 118 HYWIDEEYSG 127


>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United

Query: 2 FWKWSEWS 9
FW S+WS
Sbjct: 163 FWFHSKWS 170


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 2 FWKWSEWS 9
FW S+WS
Sbjct: 163 FWFHSKWS 170


>sp|FIB31_BPHC1|PROBABLE tail fiber protein|Haemophilus phage HP1 (strain HP1c1)

Query: 5 WSEW 8
WSEW
Sbjct: 524 WSEW 527


>sp|019R_FRG3G|PUTATIVE serine/threonine-protein kinase 019R|Frog virus 3 (isolate Goorha)

Query: 5 WSEWS 9
WS+WS
Sbjct: 183 WSDWS 187


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 1 HFWKWS 6
+FW+W+
Sbjct: 308 NFWQWT 313


>sp|FIBL1_BPT5|SIDE tail fiber protein pb1|Escherichia phage T5 (Enterobacteria phage

Query: 2 FWKWSE 7
FW W E
Sbjct: 1292 FWTWKE 1297


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 3 WKWSEWSG 10
W W W G
Sbjct: 1194 WPWYVWLG 1201


>sp|SPIKE_BCRP3|SPIKE glycoprotein|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 3 WKWSEWSG 10
W W W G
Sbjct: 1180 WPWYVWLG 1187


>sp|SPIKE_BCHK4|SPIKE glycoprotein|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 3 WKWSEWSG 10
W W W G
Sbjct: 1296 WPWYVWLG 1303


>sp|SPIKE_BCHK3|SPIKE glycoprotein|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 3 WKWSEWSG 10
W W W G
Sbjct: 1181 WPWYVWLG 1188


>sp|SPIKE_BC279|SPIKE glycoprotein|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 3 WKWSEWSG 10
W W W G
Sbjct: 1180 WPWYVWLG 1187


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 1 HFWKWS 6
+FW+W+
Sbjct: 308 NFWQWT 313


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 1 HFWKWS 6
+FW+W+
Sbjct: 308 NFWQWT 313


>sp|CAPSD_TASV2|CAPSID polyprotein VP90|Turkey astrovirus 2 (TAstV-2)

Query: 1 HFWKWS 6
+FW WS
Sbjct: 608 YFWNWS 613


>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 3 WKWS 6
WKWS
Sbjct: 1780 WKWS 1783


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 1 HFWKWS 6
+FW+W+
Sbjct: 308 NFWQWT 313


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 1 HFWKWSEWSG 10
W +EWSG
Sbjct: 168 QIWFNNEWSG 177


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 1 HFWKWSEWSG 10
W +EWSG
Sbjct: 168 QIWFNNEWSG 177


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 1 HFWKWSEWSG 10
W +EWSG
Sbjct: 168 QIWFNNEWSG 177


>sp|VMT9_MYXVL|KELCH repeat protein M-T9|Myxoma virus (strain Lausanne) (MYXV)

Query: 3 WKWSE 7
WKW E
Sbjct: 481 WKWQE 485


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 1 HFWKWS 6
+FW+W+
Sbjct: 306 NFWQWT 311


>sp|P4_RTBVP|PROTEIN P4|Rice tungro bacilliform virus (isolate

Query: 1 HFWKWSEWSG 10
H W W E G
Sbjct: 360 HAWAWPEHDG 369


>sp|TUBE2_BPT7|TAIL tubular protein gp12|Escherichia phage T7 (Bacteriophage T7)

Query: 3 WKWSEWS 9
+KW EWS
Sbjct: 322 FKWLEWS 328


>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 3 WKWSEWSG 10
W W W G
Sbjct: 1212 WPWYIWLG 1219


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 3 WKWSEWSG 10
W W W G
Sbjct: 1295 WPWYIWLG 1302


>sp|SPIKE_BCHK5|SPIKE glycoprotein|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 3 WKWSEWSG 10
W W W G
Sbjct: 1296 WPWYIWLG 1303


>sp|SPIKE_BC133|SPIKE glycoprotein|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 3 WKWSEWSG 10
W W W G
Sbjct: 1294 WPWYIWLG 1301


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1 HFWKWSE 7
H W+W++
Sbjct: 1255 HLWRWTD 1261


>sp|HMUDK_BPPM6|5-HMDU DNA kinase|Pseudomonas phage M6

Query: 5 WSEWS 9
W EWS
Sbjct: 106 WQEWS 110


>sp|DAM_BPP1|DNA N-6-adenine-methyltransferase|Escherichia phage P1 (Bacteriophage

Query: 2 FWKWSEWSG 10
FW+W +G
Sbjct: 166 FWRWDGKTG 174


>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 HFWKWSEWSG 10
H + W+ W G
Sbjct: 470 HTYSWNIWDG 479


>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)

Query: 1 HFWKWSEWSG 10
H + W+ W G
Sbjct: 466 HTYSWNIWDG 475


>sp|POLR_NORAV|REPLICATION polyprotein|Nora virus

Query: 4 KWSEWS 9
KW+ WS
Sbjct: 390 KWTTWS 395


>sp|POLN_CRPVC|REPLICASE polyprotein|Cricket paralysis virus (isolate

Query: 4 KWSEW 8
KWS+W
Sbjct: 799 KWSKW 803


>sp|095L_IIV3|PROBABLE matrix metalloproteinase 095L|Invertebrate iridescent virus 3

Query: 2 FWKWSEWS 9
FWKWS+ S
Sbjct: 190 FWKWSKES 197


>sp|TMP_LAMBD|TAPE measure protein|Escherichia phage lambda (Bacteriophage lambda)

Query: 5 WSEW 8
WSEW
Sbjct: 637 WSEW 640


>sp|YO22_ADEG1|UNCHARACTERIZED protein ORF22|Fowl adenovirus A serotype 1

Query: 1 HFWKWSEW 8
++W+ SEW
Sbjct: 190 YYWQMSEW 197


>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 4 KWSEWS 9
KWS W+
Sbjct: 252 KWSRWT 257


>sp|PG047_VACCW|IMMUNE evasion protein OPG047|Vaccinia virus (strain Western Reserve)

Query: 1 HFWKWSEWSG 10
H + W+ W G
Sbjct: 470 HTYSWNIWDG 479


>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1

Query: 1 HFWKW 5
H W+W
Sbjct: 12 HLWRW 16


>sp|GLYCO_DMSVA|GLYCOPROTEIN melanogaster sigma virus (isolate

Query: 5 WSEWS 9
W+EWS
Sbjct: 399 WTEWS 403


>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 FWKWSEWSG 10
++ W +W+G
Sbjct: 554 WFHWHDWAG 562


>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 FWKWSEWSG 10
++ W +W+G
Sbjct: 554 WFHWHDWAG 562


>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 FWKWSEWSG 10
++ W +W+G
Sbjct: 554 WFHWHDWAG 562


>sp|DPOL_ADEB3|DNA polymerase|Bovine adenovirus B serotype 3

Query: 4 KWSEW 8
KWS W
Sbjct: 286 KWSSW 290


>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 HFWKW 5
H WKW
Sbjct: 12 HLWKW 16


>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4

Query: 4 KWSEWSG 10
KW W G
Sbjct: 319 KWDRWHG 325




84|Sequence|416|425|SEWSGQNFTT

>sp|Y084_SFAVA|PUTATIVE structural protein ORF84|Spodoptera frugiperda ascovirus 1a

Query: 1 SEWSGQNFTT 10
+EWSG+ TT
Sbjct: 887 TEWSGKVSTT 896


>sp|5057R_ASFM2|PROTEIN MGF 505-7R|African swine fever virus (isolate

Query: 2 EWSGQNFT 9
EW GQN +
Sbjct: 181 EWIGQNLS 188


>sp|5057R_ASFB7|PROTEIN MGF 505-7R|African swine fever virus (strain

Query: 2 EWSGQNFT 9
EW GQN +
Sbjct: 181 EWIGQNLS 188


>sp|VP2_AHSV3|OUTER capsid protein VP2|African horse sickness virus 3

Query: 2 EWSGQNFT 9
EW+ +NFT
Sbjct: 988 EWAMKNFT 995


>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 SEWSGQNFT 9
SEW GQ+ +
Sbjct: 12 SEWFGQSLS 20


>sp|5056R_ASFP4|PROTEIN MGF 505-6R|African swine fever virus (isolate

Query: 2 EWSGQNF 8
EW GQN
Sbjct: 181 EWIGQNL 187


>sp|VP8_MYRV9|UNCHARACTERIZED protein VP8|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 2 EWSGQNFT 9
+W+G NF+
Sbjct: 330 DWTGGNFS 337


>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)

Query: 1 SEWSGQNFT 9
SEW GQ+ +
Sbjct: 12 SEWFGQSLS 20


>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)

Query: 2 EWSGQNF 8
EW GQN
Sbjct: 13 EWFGQNL 19


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 2 EWSGQNF 8
+WSG NF
Sbjct: 942 DWSGTNF 948


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 2 EWSGQNFT 9
+W G+N+T
Sbjct: 2717 DWYGKNYT 2724


>sp|NS1AB_MASV1|NON-STRUCTURAL polyprotein 1AB|Mink astrovirus 1 (MAstV-1)

Query: 2 EWSGQNFTT 10
+W GQN T
Sbjct: 748 DWFGQNLPT 756


>sp|CVC2_EHV1V|CAPSID vertex component 2|Equine herpesvirus 1 (strain V592)

Query: 3 WSGQNFT 9
WSG FT
Sbjct: 39 WSGPTFT 45


>sp|NS1A_MASV1|NON-STRUCTURAL polyprotein 1A|Mink astrovirus 1 (MAstV-1)

Query: 2 EWSGQNFTT 10
+W GQN T
Sbjct: 748 DWFGQNLPT 756


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 3 WSGQNFT 9
W+G++FT
Sbjct: 1320 WNGESFT 1326


>sp|CVC2_EHV1B|CAPSID vertex component 2|Equine herpesvirus 1 (strain Ab4p)

Query: 3 WSGQNFT 9
WSG FT
Sbjct: 39 WSGPTFT 45


>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5

Query: 2 EWSGQNF 8
+WSG N+
Sbjct: 557 DWSGHNY 563




85|Sequence|421|430|QNFTTLEAAP

>sp|DPOL_EHV1V|DNA polymerase catalytic subunit|Equine herpesvirus 1 (strain V592)

Query: 3 FTTLEAAP 10
F TLEAAP
Sbjct: 1210 FCTLEAAP 1217


>sp|DPOL_EHV1B|DNA polymerase catalytic subunit|Equine herpesvirus 1 (strain Ab4p)

Query: 3 FTTLEAAP 10
F TLEAAP
Sbjct: 1210 FCTLEAAP 1217


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 QNFTTLEAAP 10
Q FTT++ P
Sbjct: 5228 QKFTTIQGPP 5237


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 1 QNFTTLEAAP 10
Q FTT++ P
Sbjct: 5203 QKFTTIQGPP 5212




86|Sequence|426|435|LEAAPSEAPD

>sp|GB_SUHVF|ENVELOPE glycoprotein B|Suid herpesvirus 1 (strain Indiana-Funkhauser

Query: 4 APSEAPD 10
PSEAPD
Sbjct: 95 GPSEAPD 101


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 1 LEAAPSEAP 9
+E APS+AP
Sbjct: 102 VEGAPSKAP 110


>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain

Query: 2 EAAPSEAPD 10
APS+APD
Sbjct: 510 RVAPSQAPD 518




87|Sequence|431|440|SEAPDVWRIV

>sp|Y05G_BPT4|UNCHARACTERIZED 38.9 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 SEAPDVWRIV 10
S+ PDVW+ +
Sbjct: 96 SDLPDVWKFI 105


>sp|PORTL_PSHV1|PORTAL protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 EAPDVWRIV 10
+APD WR++
Sbjct: 506 DAPDAWRVL 514


>sp|G1P_BPPF3|PUTATIVE Gene 1 protein|Pseudomonas phage Pf3 (Bacteriophage Pf3)

Query: 1 SEAPDVWR 8
S+APD WR
Sbjct: 50 SDAPDDWR 57


>sp|UL79_EHV2|GENE 18 protein|Equine herpesvirus 2 (strain 86/87)

Query: 4 PDVWRIV 10
P++WR+V
Sbjct: 78 PEIWRLV 84


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 APDVWRI 9
AP+VW I
Sbjct: 4167 APNVWHI 4173


>sp|UL24_HHV8P|PROTEIN UL24 homolog|Human herpesvirus 8 type P

Query: 1 SEAPDVWRIV 10
S PD+WR +
Sbjct: 39 STLPDLWRFL 48


>sp|L_RSVT|RNA-DIRECTED RNA polymerase L|Rice stripe virus (isolate T)

Query: 3 APDVWRI 9
APD++RI
Sbjct: 678 APDIYRI 684


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 APDVWRI 9
AP+VW I
Sbjct: 4167 APNVWHI 4173


>sp|HN_NDVM|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Miyadera/51)

Query: 2 EAPDVWRIV 10
EA + WR+V
Sbjct: 16 EAKNTWRLV 24


>sp|HN_NDVC|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Chi/85)

Query: 2 EAPDVWRIV 10
EA + WR+V
Sbjct: 16 EAKNTWRLV 24


>sp|HN_NDVA|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Chicken/Australia-Victoria/32)

Query: 2 EAPDVWRIV 10
EA + WR+V
Sbjct: 16 EAKNTWRLV 24


>sp|HN_NDVU|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Chicken/Northern

Query: 2 EAPDVWRIV 10
EA + WR+V
Sbjct: 16 EAKNTWRLV 24


>sp|HN_NDVD|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain D26/76)

Query: 2 EAPDVWRIV 10
EA + WR+V
Sbjct: 16 EAKNTWRLV 24


>sp|HN_NDVQ|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Queensland/66)

Query: 2 EAPDVWRIV 10
EA + WR+V
Sbjct: 16 EAKNTWRLV 24


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 2 EAPDVWRIV 10
E P+ WR+V
Sbjct: 2941 EDPEFWRLV 2949


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 2 EAPDVWRIV 10
E P+ WR+V
Sbjct: 2941 EDPEFWRLV 2949




88|Sequence|436|445|VWRIVSLEPG

>sp|BXD_CBDP|BOTULINUM neurotoxin type D|Clostridium botulinum D phage (Clostridium

Query: 2 WRIVSLEPG 10
W+ +S +PG
Sbjct: 1265 WKFISRDPG 1273


>sp|VP2_AHSV4|OUTER capsid protein VP2|African horse sickness virus 4

Query: 3 RIVSLEP 9
RIVS+EP
Sbjct: 186 RIVSIEP 192


>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58

Query: 4 IVSLEPG 10
+VSLEPG
Sbjct: 406 LVSLEPG 412


>sp|DPOL_SFAVA|DNA polymerase|Spodoptera frugiperda ascovirus 1a (SfAV-1a)

Query: 2 WRIVSLE 8
WR+VS E
Sbjct: 21 WRVVSTE 27


>sp|DPOL_HVAVE|DNA polymerase|Heliothis virescens ascovirus 3e (HvAV-3e)

Query: 2 WRIVSLE 8
WR+VS E
Sbjct: 15 WRVVSTE 21


>sp|PORTL_BPBPP|PROBABLE portal protein|Bordetella phage BPP-1

Query: 2 WRIVSLEPG 10
W+ V EPG
Sbjct: 233 WKSVYFEPG 241


>sp|PORTL_BPHK7|PORTAL protein|Enterobacteria phage HK97 (Bacteriophage HK97)

Query: 1 VWRIVSL 7
VWR VSL
Sbjct: 63 VWRCVSL 69


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 WRIVSLEP 9
W+I+ L+P
Sbjct: 3758 WKILGLQP 3765


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 WRIVSLEP 9
W+I+ L+P
Sbjct: 3775 WKILGLQP 3782




89|Sequence|441|450|SLEPGNHTVT

>sp|OPEP3_NPVOP|OPEP-3 protein|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 2 LEPGNHTV 9
LEP N+TV
Sbjct: 73 LEPDNYTV 80


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 SLEPGNHTV 9
SL+PG H +
Sbjct: 1001 SLQPGGHVL 1009


>sp|P26_BNYVS|PROTEIN P26|Beet necrotic yellow vein virus

Query: 4 PGNHTVT 10
PGN+T+T
Sbjct: 157 PGNYTLT 163


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 SLEPGNHTV 9
SL+PG H +
Sbjct: 1001 SLQPGGHVL 1009


>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 LEPGNHTVT 10
PGNHT T
Sbjct: 229 FSPGNHTDT 237


>sp|Y1334_ATV|PUTATIVE transmembrane protein ORF1334|Acidianus two-tailed virus (ATV)

Query: 5 GNHTVT 10
GNHTVT
Sbjct: 1232 GNHTVT 1237


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 SLEPGNHT 8
SLE G HT
Sbjct: 137 SLETGEHT 144


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 SLEPGNHT 8
SLE G HT
Sbjct: 137 SLETGEHT 144


>sp|YO10_ADEG1|PUTATIVE Ig-like domain-containing protein ORF10|Fowl adenovirus A serotype

Query: 2 LEPGNHTVT 10
+PGN+T+T
Sbjct: 194 FDPGNNTLT 202


>sp|VF380_IIV6|PROBABLE serine/threonine-protein kinase 380R|Invertebrate iridescent virus

Query: 1 SLEPGNHT 8
+++PG+HT
Sbjct: 456 TVQPGSHT 463


>sp|RDRP_MRNV|RNA-DIRECTED RNA polymerase|Macrobrachium rosenbergii nodavirus (MrNV)

Query: 2 LEPGNHTV 9
+ PG HTV
Sbjct: 136 ISPGGHTV 143




90|Sequence|446|455|NHTVTLFWKP

>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)

Query: 1 NHTVTLFWKP 10
+H TLFW P
Sbjct: 574 DHQKTLFWLP 583


>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)

Query: 1 NHTVTLFWKP 10
+H TLFW P
Sbjct: 574 DHQKTLFWLP 583


>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)

Query: 1 NHTVTLFWKP 10
+H TLFW P
Sbjct: 574 DHQKTLFWLP 583


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 4 VTLFWKP 10
++LFW+P
Sbjct: 169 LSLFWRP 175


>sp|VP1_RRSVT|STRUCTURAL protein VP1|Rice ragged stunt virus (isolate

Query: 1 NHTVTLFWKP 10
+H VT+F +P
Sbjct: 991 SHVVTVFHRP 1000


>sp|VMT8_MYXVL|KELCH repeat protein M-T8|Myxoma virus (strain Lausanne) (MYXV)

Query: 5 TLFWKP 10
TL+W+P
Sbjct: 344 TLYWRP 349


>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1 NHTVTLFWK 9
+ T+T FWK
Sbjct: 714 HQTLTSFWK 722


>sp|DPOL_ADEB3|DNA polymerase|Bovine adenovirus B serotype 3

Query: 1 NHTVTLFWKP 10
NH VT +KP
Sbjct: 898 NHHVTYTYKP 907


>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 NHTVTLFWK 9
+ T+T FWK
Sbjct: 729 HQTLTSFWK 737




91|Sequence|451|460|LFWKPLSKLH

>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 LFWKPLSKLH 10
LF+KP KLH
Sbjct: 49 LFYKPRDKLH 58


>sp|RPOTF_PRRSL|REPLICASE polyprotein 1TF|Porcine reproductive and respiratory syndrome

Query: 1 LFWKPLSKLH 10
LF+KP KLH
Sbjct: 49 LFYKPRDKLH 58


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 LFWKPLSKLH 10
LF+KP K+H
Sbjct: 49 LFYKPKDKIH 58


>sp|VP9_APRVF|UNCHARACTERIZED protein VP9|Aedes pseudoscutellaris reovirus (isolate France)

Query: 3 WKPLSKL 9
WKP+S+L
Sbjct: 131 WKPVSQL 137


>sp|1ATF_PRRSS|TRUNCATED polyprotein 1aTF|Porcine reproductive and respiratory syndrome

Query: 1 LFWKPLSKLH 10
LF+KP K+H
Sbjct: 49 LFYKPKDKIH 58


>sp|US10_PSHV1|VIRION protein US10 homolog|Psittacid herpesvirus 1 (isolate Amazon

Query: 4 KPLSKLH 10
+PLS+LH
Sbjct: 2 RPLSRLH 8


>sp|US10_GAHVM|VIRION protein US10 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 FWKPLSK 8
+WKPL +
Sbjct: 172 YWKPLCR 178


>sp|US10_GAHVG|VIRION protein US10 homolog|Gallid herpesvirus 2 (strain GA)

Query: 2 FWKPLSK 8
+WKPL +
Sbjct: 172 YWKPLCR 178


>sp|K6_VACCW|PROTEIN K6|Vaccinia virus (strain Western Reserve)

Query: 1 LFWKPLS 7
++WKP++
Sbjct: 14 IYWKPIT 20


>sp|K6_VACCC|PROTEIN K6|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 LFWKPLS 7
++WKP++
Sbjct: 14 IYWKPIT 20


>sp|CAPSD_ANV1|CAPSID polyprotein VP90|Avian nephritis virus 1 (ANV-1)

Query: 3 WKPLS 7
WKPLS
Sbjct: 119 WKPLS 123


>sp|VP4_FDVS|UNCHARACTERIZED protein VP4|Fiji disease virus (isolate Sugarcane)

Query: 3 WKPLSKLH 10
WK L K+H
Sbjct: 928 WKILKKMH 935


>sp|ESTE_HVAVE|PUTATIVE esterase|Heliothis virescens ascovirus 3e (HvAV-3e)

Query: 2 FWKPLSKLH 10
FW L K H
Sbjct: 623 FWNDLLKFH 631


>sp|YL613_MIMIV|UNCHARACTERIZED protein L613|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LFWKPLSKLH 10
L W P++ LH
Sbjct: 362 LIWFPINTLH 371


>sp|VS48_BRSV|SATELLITE RNA 48 kDa protein|Beet ringspot virus (BRSV) (Tomato

Query: 3 WKPLSKLH 10
WKP K H
Sbjct: 305 WKPSKKQH 312




92|Sequence|456|465|LSKLHANGKI

>sp|UL95_ALHV1|GENE 34 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 LSKLHANG 8
L+KLH NG
Sbjct: 4 LTKLHCNG 11


>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain

Query: 4 LHANGKI 10
+HANGKI
Sbjct: 283 VHANGKI 289


>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain

Query: 4 LHANGKI 10
+HANGKI
Sbjct: 283 VHANGKI 289


>sp|VG45_ALHV1|UNCHARACTERIZED gene 45 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 LSKLHANGKI 10
L KLH N K+
Sbjct: 32 LQKLHQNAKL 41


>sp|VP4_MPRVN|UNCHARACTERIZED protein VP4|Micromonas pusilla reovirus (isolate Netherlands/2005)

Query: 1 LSKLHANG 8
LSK+H NG
Sbjct: 812 LSKVHNNG 819


>sp|C102B_SSV1|UNCHARACTERIZED protein C-102b|Sulfolobus spindle-shape virus 1 (SSV1)

Query: 1 LSKLHANGKI 10
++++H NGKI
Sbjct: 72 VAEVHLNGKI 81


>sp|REP_BPIF1|REPLICATION-ASSOCIATED protein G2P|Escherichia phage If1 (Bacteriophage If1)

Query: 1 LSKLHANGK 9
+ +LH+NGK
Sbjct: 110 VPRLHSNGK 118


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 1 LSKLHANGKI 10
+SKLHA+ K+
Sbjct: 399 MSKLHAHLKL 408


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 LSKLHANGKI 10
+SKLHA+ K+
Sbjct: 399 MSKLHAHLKL 408


>sp|P12_BPPM2|PROBABLE replication protein P12|Pseudoalteromonas phage PM2 (Bacteriophage

Query: 2 SKLHANGK 9
SK HAN K
Sbjct: 303 SKYHANSK 310




93|Sequence|461|470|ANGKILFYNV

>sp|VP33_NPVOP|33 kDa early protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 4 KILFYNV 10
K+LFYN+
Sbjct: 143 KVLFYNI 149


>sp|FLSO_NPVAC|FAD-LINKED sulfhydryl oxidase|Autographa californica nuclear polyhedrosis

Query: 4 KILFYNV 10
K+LFYNV
Sbjct: 143 KVLFYNV 149


>sp|DPOL_ADEB2|DNA polymerase|Bovine adenovirus 2 (BAdV-2) (Mastadenovirus

Query: 2 NGKILFYNV 10
NGKILF ++
Sbjct: 276 NGKILFNDI 284


>sp|Y093_OSHVF|UNCHARACTERIZED protein ORF93|Ostreid herpesvirus 1 (isolate France)

Query: 4 KILFYNV 10
KILFY+V
Sbjct: 171 KILFYDV 177


>sp|YR626_MIMIV|UNCHARACTERIZED protein R626|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 ANGKILFYNV 10
AN ILFYN+
Sbjct: 181 ANSCILFYNM 190


>sp|TRX2_SHV21|TRIPLEX capsid protein 2|Saimiriine herpesvirus 2 (strain 11)

Query: 3 GKILFYNV 10
GK+L YN+
Sbjct: 150 GKLLLYNL 157


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 3 GKILFY 8
GKILFY
Sbjct: 89 GKILFY 94


>sp|NTP1_MSEPV|NUCLEOSIDE triphosphatase I|Melanoplus sanguinipes entomopoxvirus (MsEPV)

Query: 1 ANGKILFY 8
+NGK+L Y
Sbjct: 387 SNGKVLLY 394


>sp|VP4_ROTRH|OUTER capsid protein VP4|Rotavirus A (strain RVA/Monkey/United

Query: 2 NGKILFYN 9
NGKI YN
Sbjct: 171 NGKIYTYN 178


>sp|HELI_GAHVM|DNA replication helicase|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 NGKILFYN 9
NG I FYN
Sbjct: 529 NGMINFYN 536




94|Sequence|466|475|LFYNVVVENL

>sp|REP_CDDV1|REPLICATION-ASSOCIATED protein|Chaetoceros diatodnavirus 1 (Chaetoceros setoense

Query: 1 LFYNVVVENL 10
LF+N ENL
Sbjct: 66 LFFNDTAENL 75


>sp|VG40_SHV21|UNCHARACTERIZED gene 40 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 2 FYNVVVE 8
FYNV++E
Sbjct: 16 FYNVILE 22




95|Sequence|471|480|VVENLDKPSS

>sp|VP4_LBVAV|PROTEIN 4|Lettuce big-vein associated virus (isolate

Query: 2 VENLDKPSS 10
+EN DKP+S
Sbjct: 141 IENGDKPAS 149


>sp|REP_BPHC1|REPLICATION protein|Haemophilus phage HP1 (strain HP1c1)

Query: 1 VVENLDKP 8
++EN+D P
Sbjct: 345 IIENIDNP 352


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 1 VVENLDKPS 9
+++N DKPS
Sbjct: 2516 LIKNADKPS 2524


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1 VVENLDKPS 9
+++N DKPS
Sbjct: 2516 LIKNADKPS 2524


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1 VVENLDKPS 9
+++N DKPS
Sbjct: 2516 LIKNADKPS 2524


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1 VVENLDKPS 9
+++N DKPS
Sbjct: 2516 LIKNADKPS 2524


>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 1 VVENLDKPS 9
V+ENL PS
Sbjct: 232 VIENLHNPS 240


>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 1 VVENLDKPS 9
V+ENL PS
Sbjct: 232 VIENLHNPS 240


>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 1 VVENLDKPS 9
V+ENL PS
Sbjct: 232 VIENLHNPS 240


>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 1 VVENLDKPS 9
V+ENL PS
Sbjct: 232 VIENLHNPS 240


>sp|Y892_ATV|PUTATIVE VWFA domain-containing protein ORF892|Acidianus two-tailed virus

Query: 1 VVENLDKPSS 10
++N+DKP S
Sbjct: 798 ALKNIDKPDS 807




96|Sequence|476|485|DKPSSSELHS

>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 DKPSSSEL 8
D PSSSE+
Sbjct: 29 DNPSSSEV 36


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 DKPSSSEL 8
D PSSSE+
Sbjct: 29 DNPSSSEV 36


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 DKPSSSEL 8
D PSSSE+
Sbjct: 29 DNPSSSEV 36


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN)

Query: 1 DKPSSSEL 8
D PSSSE+
Sbjct: 29 DNPSSSEV 36


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT)

Query: 1 DKPSSSEL 8
D PSSSE+
Sbjct: 29 DNPSSSEV 36


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 DKPSSSEL 8
D PSSSE+
Sbjct: 29 DNPSSSEV 36


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 DKPSSSEL 8
D PSSSE+
Sbjct: 29 DNPSSSEV 36


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 DKPSSSEL 8
D PSSSE+
Sbjct: 29 DNPSSSEV 36


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN)

Query: 1 DKPSSSEL 8
D PSSSE+
Sbjct: 29 DNPSSSEV 36


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT)

Query: 1 DKPSSSEL 8
D PSSSE+
Sbjct: 29 DNPSSSEV 36


>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)

Query: 2 KPSSSELHS 10
KPSSSE H+
Sbjct: 800 KPSSSESHA 808


>sp|ABL_MLVAB|TYROSINE-PROTEIN kinase transforming protein Abl|Abelson murine leukemia virus

Query: 1 DKPSSSELH 9
D+PS +E+H
Sbjct: 368 DRPSFAEIH 376


>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)

Query: 2 KPSSSELHS 10
KPSSSE H+
Sbjct: 800 KPSSSESHA 808


>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 KPSSSELHS 10
KPSSSE H+
Sbjct: 800 KPSSSESHA 808


>sp|YR528_MIMIV|PUTATIVE 5'-3' exonuclease R528|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DKPSSSE 7
+KPSSSE
Sbjct: 587 EKPSSSE 593


>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 KPSSSELHS 10
KP + ELHS
Sbjct: 156 KPITQELHS 164


>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 KPSSSELHS 10
KP + ELHS
Sbjct: 156 KPITQELHS 164


>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 KPSSSELHS 10
KP + ELHS
Sbjct: 156 KPITQELHS 164


>sp|YL361_MIMIV|UNCHARACTERIZED protein L361|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DKPSSSELHS 10
D+P +SEL+S
Sbjct: 185 DRPPNSELNS 194




97|Sequence|481|490|SELHSIPAPA

>sp|VG29_ICHVA|UNCHARACTERIZED protein ORF29|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 SELHSIPAPA 10
+++H IP PA
Sbjct: 164 NKVHHIPIPA 173


>sp|GE_CHV9D|ENVELOPE glycoprotein E|Cercopithecine herpesvirus 9 (strain DHV)

Query: 2 ELHSIPAPA 10
E+H++P+P+
Sbjct: 494 EIHNVPSPS 502


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 SELHSIPAP 9
SE+ IPAP
Sbjct: 1795 SEIRPIPAP 1803


>sp|REV_HV2D1|PROTEIN Rev|Human immunodeficiency virus type 2

Query: 1 SELHSIPAP 9
++LH+IP P
Sbjct: 55 TKLHTIPDP 63


>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 4 HSIPAPA 10
HSIP PA
Sbjct: 1222 HSIPDPA 1228




98|Sequence|486|495|IPAPANSTKL

>sp|GLYCO_LNYV3|GLYCOPROTEIN necrotic yellows virus (isolate

Query: 1 IPAPANSTKL 10
IP+ ANST L
Sbjct: 237 IPSIANSTTL 246


>sp|VP4_ROTPC|OUTER capsid protein VP4|Rotavirus C (strain RVC/Pig/United

Query: 4 PANSTKL 10
PAN+TKL
Sbjct: 91 PANTTKL 97


>sp|CAPSH_ADECR|HEXON protein|Canine adenovirus serotype 1 (strain

Query: 2 PAPANSTKL 10
P PAN+T L
Sbjct: 607 PIPANTTNL 615


>sp|CAPSH_ADECC|HEXON protein|Canine adenovirus serotype 1 (strain

Query: 2 PAPANSTKL 10
P PAN+T L
Sbjct: 607 PIPANTTNL 615




99|Sequence|491|500|NSTKLILDRC

>sp|RFCS2_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 NSTKLILDRC 10
N TK ILD C
Sbjct: 208 NDTKFILDNC 217


>sp|END4_MIMIV|PUTATIVE endonuclease 4|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 NSTKLILDRC 10
N+T LI DRC
Sbjct: 112 NATNLIGDRC 121


>sp|SPIKE_BCHK9|SPIKE glycoprotein|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 NSTKLILDRC 10
N T +I DRC
Sbjct: 521 NDTVVITDRC 530




100|Sequence|496|505|ILDRCSYQIC

>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 ILDRCSYQIC 10
+LDRC ++C
Sbjct: 1536 VLDRCYPRLC 1545


>sp|INTG_BPPF1|PUTATIVE integrase|Pseudomonas phage Pf1 (Bacteriophage Pf1)

Query: 4 RCSYQIC 10
RC+YQ C
Sbjct: 253 RCAYQRC 259


>sp|YL169_MIMIV|UNCHARACTERIZED protein L169|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LDRCSYQI 9
LD+C Y+I
Sbjct: 104 LDKCQYRI 111


>sp|DEPOL_BPK56|DEPOLYMERASE, capsule KL47-specific|Klebsiella phage P560 (Bacteriophage P560)

Query: 1 ILDRCSYQIC 10
++D+C Q C
Sbjct: 441 VVDKCDIQYC 450


>sp|P32_MCMVK|UNCHARACTERIZED protein p32|Maize chlorotic mottle virus (isolate

Query: 3 DRCSYQIC 10
DRC Q C
Sbjct: 118 DRCKCQFC 125


>sp|CG30_NPVBM|ZINC finger protein CG30|Bombyx mori nuclear polyhedrosis virus

Query: 2 LDRCSYQIC 10
LD C +Q+C
Sbjct: 36 LDTCKHQLC 44


>sp|CG30_NPVAC|ZINC finger protein CG30|Autographa californica nuclear polyhedrosis

Query: 2 LDRCSYQIC 10
LD C +Q+C
Sbjct: 36 LDTCKHQLC 44


>sp|YR722_MIMIV|UNCHARACTERIZED protein R722|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 ILDRCSYQIC 10
I +C Y +C
Sbjct: 17 ICRKCGYHVC 26


>sp|NSP3_ROTS1|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)

Query: 1 ILDRCSYQ 8
++ RC+YQ
Sbjct: 302 LIQRCNYQ 309


>sp|NSP3_ROTS4|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/SA11-4F/G3P6[1]) (RV-A)

Query: 1 ILDRCSYQ 8
++ RC+YQ
Sbjct: 302 LIQRCNYQ 309


>sp|NSP3_ROTSH|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Monkey/South

Query: 1 ILDRCSYQ 8
++ RC+YQ
Sbjct: 302 LIQRCNYQ 309


>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate

Query: 3 DRCSYQIC 10
D C Y +C
Sbjct: 1553 DDCMYSVC 1560


>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United

Query: 3 DRCSYQIC 10
D C Y +C
Sbjct: 1553 DDCMYSVC 1560


>sp|GP_HAZVJ|ENVELOPMENT polyprotein|Hazara virus (isolate JC280)

Query: 3 DRCSYQIC 10
+ CSY IC
Sbjct: 543 ESCSYNIC 550


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 5 CSYQIC 10
CSY IC
Sbjct: 756 CSYNIC 761




101|Sequence|501|510|SYQICVIANN

>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 2 YQICVIANN 10
Y IC++ANN
Sbjct: 1986 YLICILANN 1994


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 2 YQICVIANN 10
Y IC++ANN
Sbjct: 1986 YLICILANN 1994


>sp|NSP4_RGDV|NON-STRUCTURAL protein 4|Rice gall dwarf virus (RGDV)

Query: 1 SYQICVIA 8
SY ICV A
Sbjct: 405 SYHICVTA 412




102|Sequence|506|515|VIANNSVGAS

>sp|VP2_BANNV|MAJOR inner capsid protein VP2|Banna virus (BAV)

Query: 2 IANNSVGAS 10
++NN+VGA+
Sbjct: 589 VSNNAVGAA 597




103|Sequence|511|520|SVGASPASVI

>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 2 VGASPASVI 10
VGA+P S+I
Sbjct: 2362 VGATPTSLI 2370


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 2 VGASPASVI 10
VGA+P S+I
Sbjct: 2362 VGATPTSLI 2370


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 2 VGASPASVI 10
VGA+P S+I
Sbjct: 2362 VGATPTSLI 2370




104|Sequence|516|525|PASVIVISAD

>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)

Query: 1 PASVIVISAD 10
PA +IV+ AD
Sbjct: 283 PAEIIVVPAD 292




105|Sequence|521|530|VISADPENKE

>sp|TOP2_IIV6|DNA topoisomerase 2|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 VISADPENKE 10
VI DPENK+
Sbjct: 168 VIGVDPENKK 177


>sp|Y023_NPVOP|UNCHARACTERIZED 73.1 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 3 SADPENKE 10
SADP+N E
Sbjct: 119 SADPQNNE 126


>sp|RP147_FOWPN|DNA-DIRECTED RNA polymerase 147 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 1 VISADPEN 8
VIS DP+N
Sbjct: 653 VISKDPDN 660




106|Sequence|526|535|PENKEVEEER

>sp|UB403_WSSVS|RING finger containing E3 ubiquitin-protein|White spot syndrome virus

Query: 1 PENKEVEEE 9
PENK+VEEE
Sbjct: 432 PENKKVEEE 440


>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)

Query: 1 PENKEVEEER 10
PE KE +ER
Sbjct: 932 PETKECPDER 941


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 1 PENKEVEEER 10
PE KE +ER
Sbjct: 932 PETKECPDER 941


>sp|GLYCO_IRKV|GLYCOPROTEIN virus (IRKV)

Query: 1 PENKEVEEE 9
P N EVE+E
Sbjct: 44 PNNLEVEDE 52




107|Sequence|531|540|VEEERIAGTE

***** No hits found ******


108|Sequence|536|545|IAGTEGGFSL

>sp|LRP1_HHV1F|LATENCY-RELATED protein 1|Human herpesvirus 1 (strain F)

Query: 2 AGTEGGFSL 10
AG EGGF L
Sbjct: 269 AGAEGGFLL 277


>sp|SSB_BPT6|SINGLE-STRANDED DNA-binding protein|Enterobacteria phage T6 (Bacteriophage T6)

Query: 1 IAGTEGGFS 9
+AG +GGFS
Sbjct: 17 LAGNKGGFS 25


>sp|SSB_BPT2|SINGLE-STRANDED DNA-binding protein|Enterobacteria phage T2 (Bacteriophage T2)

Query: 1 IAGTEGGFS 9
+AG +GGFS
Sbjct: 17 LAGNKGGFS 25


>sp|SSB_BPR70|SINGLE-STRANDED DNA-binding protein|Enterobacteria phage RB70 (Bacteriophage

Query: 1 IAGTEGGFS 9
+AG +GGFS
Sbjct: 17 LAGNKGGFS 25


>sp|SSB_BPS14|SINGLE-STRANDED DNA-binding protein|Escherichia phage SV14 (Bacteriophage SV14)

Query: 1 IAGTEGGFS 9
+AG +GGFS
Sbjct: 17 LAGNKGGFS 25


>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7

Query: 4 TEGGFSL 10
TEGGFS+
Sbjct: 129 TEGGFSI 135


>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40

Query: 4 TEGGFSL 10
TEGGFS+
Sbjct: 129 TEGGFSV 135


>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 AGTEGGFS 9
GT GGFS
Sbjct: 423 GGTSGGFS 430


>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 AGTEGGFS 9
GT GGFS
Sbjct: 423 GGTSGGFS 430


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 2 AGTEGGFS 9
+GT GGFS
Sbjct: 1697 SGTVGGFS 1704


>sp|VHED_BPR69|SINGLE-STRANDED DNA-binding protein|Escherichia phage RB69 (Bacteriophage RB69)

Query: 1 IAGTEGGFS 9
+AG +GGFS
Sbjct: 17 LAGNKGGFS 25


>sp|VHED_BPR32|SINGLE-STRANDED DNA-binding protein|Enterobacteria phage RB32 (Bacteriophage

Query: 1 IAGTEGGFS 9
+AG +GGFS
Sbjct: 17 LAGNKGGFS 25


>sp|L_SFTS|RNA-DIRECTED RNA polymerase L|Dabie bandavirus (Severe fever with

Query: 2 AGTEGGFS 9
+GT GGFS
Sbjct: 1697 SGTLGGFS 1704


>sp|CATV_NPVAH|VIRAL cathepsin|Adoxophyes honmai nucleopolyhedrovirus

Query: 3 GTEGGFS 9
GTEGG S
Sbjct: 291 GTEGGVS 297


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 2 AGTEGGF 8
AGT GGF
Sbjct: 1707 AGTVGGF 1713


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 2 AGTEGGF 8
AGT GGF
Sbjct: 1707 AGTVGGF 1713




109|Sequence|541|550|GGFSLSWKPQ

>sp|GB_EHV2|ENVELOPE glycoprotein B|Equine herpesvirus 2 (strain 86/87)

Query: 1 GGFSLSWK 8
G +SLSWK
Sbjct: 290 GDYSLSWK 297


>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus

Query: 1 GGFSLSWKPQ 10
GG +SW+P+
Sbjct: 85 GGGVVSWRPE 94


>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus

Query: 1 GGFSLSWKPQ 10
GG +SW+P+
Sbjct: 85 GGGVVSWRPE 94


>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P

Query: 1 GGFSLSWKP 9
GG L W+P
Sbjct: 395 GGLYLVWQP 403


>sp|ITP_SHV21|INNER tegument protein|Saimiriine herpesvirus 2 (strain 11)

Query: 3 FSLSWKPQ 10
FS+ +KPQ
Sbjct: 620 FSIKYKPQ 627


>sp|GB_ALHV1|ENVELOPE glycoprotein B|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 GGFSLSWKP 9
GG L W+P
Sbjct: 395 GGLLLVWQP 403


>sp|MP_CRSVL|MOVEMENT protein|Carnation ringspot virus (isolate Lommel)

Query: 2 GFSLSWKP 9
G SLSW P
Sbjct: 102 GQSLSWSP 109


>sp|GB_SHV21|ENVELOPE glycoprotein B|Saimiriine herpesvirus 2 (strain 11)

Query: 1 GGFSLSWKP 9
GG L W+P
Sbjct: 371 GGMILVWQP 379


>sp|L_RSVT|RNA-DIRECTED RNA polymerase L|Rice stripe virus (isolate T)

Query: 1 GGFSLSWKP 9
GG S +W P
Sbjct: 558 GGISDNWSP 566


>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 GGFSLSWKP 9
GG L+W P
Sbjct: 376 GGLLLAWLP 384


>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 GGFSLSWKP 9
GG L+W P
Sbjct: 376 GGLLLAWLP 384


>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 GGFSLSWKP 9
GG L+W P
Sbjct: 376 GGLLLAWLP 384


>sp|MVP_OUMVV|PUTATIVE movement protein|Ourmia melon virus (isolate Melon/Iran/VE9)

Query: 5 LSWKPQ 10
LSWKP
Sbjct: 93 LSWKPH 98




110|Sequence|546|555|SWKPQPGDVI

>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 3 KPQPGDVI 10
KP+PGD+I
Sbjct: 892 KPKPGDII 899


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 3 KPQPGDVI 10
KP+PGD+I
Sbjct: 892 KPKPGDII 899


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 3 KPQPGDVI 10
KP+PGD++
Sbjct: 886 KPKPGDIV 893


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 3 KPQPGDVI 10
KP+PGD++
Sbjct: 884 KPEPGDLV 891


>sp|AC4_TPCTV|PROTEIN C4|Tomato pseudo-curly top virus (TPCTV)

Query: 1 SWKPQPGDVI 10
+W PQPG I
Sbjct: 25 TWYPQPGQHI 34


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 3 KPQPGDVI 10
KP+PGD++
Sbjct: 884 KPEPGDLV 891


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 3 KPQPGDVI 10
KP+PGD++
Sbjct: 884 KPEPGDLV 891


>sp|POLG_FMDVP|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 WKPQPGDVI 10
W P P DV+
Sbjct: 170 WTPNPADVL 178


>sp|L_IPPYV|RNA-DIRECTED RNA polymerase L|Ippy mammarenavirus (isolate Rat/Central African

Query: 2 WKPQPGD 8
WKP+P D
Sbjct: 1706 WKPRPCD 1712


>sp|RDRP_ICRSV|RNA replication protein|Indian citrus ringspot virus (isolate

Query: 1 SWKPQPGDVI 10
+WK +PGD I
Sbjct: 626 TWKLKPGDFI 635


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1 SWKPQPGDVI 10
S KP PGD++
Sbjct: 882 STKPDPGDLV 891


>sp|AC4_TYCSV|PROTEIN C4|Tomato yellow leaf curl Sardinia

Query: 1 SWKPQPGDVI 10
+W PQPG I
Sbjct: 27 TWYPQPGQHI 36


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1 SWKPQPGDVI 10
S KP PGD++
Sbjct: 882 STKPDPGDLV 891


>sp|Y028_OSHVF|UNCHARACTERIZED protein ORF28|Ostreid herpesvirus 1 (isolate France)

Query: 1 SWKPQP 6
SWKP P
Sbjct: 177 SWKPDP 182


>sp|POLG_FMDVA|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 WKPQPGDVI 10
W P P DV+
Sbjct: 170 WTPDPSDVL 178


>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2

Query: 2 WKPQPGDVI 10
W P P DV+
Sbjct: 168 WTPDPSDVL 176


>sp|POLG_FMDA1|GENOME polyprotein|Foot-and-mouth disease virus serotype Asia-1

Query: 2 WKPQPGDVI 10
W P P DV+
Sbjct: 170 WTPDPSDVL 178


>sp|POLG_FMDVC|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 WKPQPGDVI 10
W P P DV+
Sbjct: 170 WTPDPSDVL 178


>sp|POLG_FMDVO|GENOME polyprotein|Foot-and-mouth disease virus serotype O

Query: 2 WKPQPGDVI 10
W P P DV+
Sbjct: 170 WTPDPSDVL 178


>sp|POLG_FMDV1|GENOME polyprotein|Foot-and-mouth disease virus (strain A10/Holland/1961

Query: 2 WKPQPGDVI 10
W P P DV+
Sbjct: 170 WTPDPSDVL 178


>sp|POLG_FMDVS|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 WKPQPGDVI 10
W P P DV+
Sbjct: 170 WTPDPSDVL 178


>sp|POLG_FMDVT|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 WKPQPGDVI 10
W P P DV+
Sbjct: 170 WTPDPSDVL 178


>sp|POLG_FMDVZ|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 WKPQPGDVI 10
W P P DV+
Sbjct: 170 WTPDPSDVL 178


>sp|POLG_FMDVI|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 WKPQPGDVI 10
W P P DV+
Sbjct: 170 WTPDPSDVL 178


>sp|POLG_FMDV5|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 WKPQPGDVI 10
W P P DV+
Sbjct: 170 WTPDPSDVL 178


>sp|AC4_BCTVC|PROTEIN C4|Beet curly top virus (strain

Query: 1 SWKPQPGDVI 10
+W PQPG I
Sbjct: 25 TWYPQPGQHI 34


>sp|POL1_TBRVM|RNA1 polyprotein|Tomato black ring virus (strain

Query: 2 WKPQPGDVI 10
+KPQ GD I
Sbjct: 2034 YKPQEGDFI 2042


>sp|AC4_BGYMV|PROTEIN AC4|Bean golden yellow mosaic virus

Query: 1 SWKPQPGDVI 10
+W PQPG I
Sbjct: 19 TWYPQPGQHI 28


>sp|AC4_BGYMJ|PROTEIN AC4|Bean golden yellow mosaic virus

Query: 1 SWKPQPGDVI 10
+W PQPG I
Sbjct: 19 TWYPQPGQHI 28


>sp|DPOL_CEV01|DNA polymerase|Chrysochromulina ericina virus (CeV01)

Query: 3 KPQPGD 8
KP+PGD
Sbjct: 1504 KPKPGD 1509


>sp|POL2_RRVC|RNA2 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 2 WKPQPGDV 9
W P+P D+
Sbjct: 771 WPPEPADI 778


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 2 WKPQPG 7
W P+PG
Sbjct: 441 WSPRPG 446


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 2 WKPQPG 7
W P+PG
Sbjct: 441 WSPRPG 446


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 2 WKPQPG 7
W P+PG
Sbjct: 441 WSPRPG 446


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2 WKPQPG 7
W P+PG
Sbjct: 441 WSPRPG 446


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2 WKPQPG 7
W P+PG
Sbjct: 441 WSPRPG 446


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2 WKPQPG 7
W P+PG
Sbjct: 441 WSPRPG 446


>sp|HBSAG_HPBDW|LARGE envelope protein|Duck hepatitis B virus (isolate

Query: 2 WKPQPGD 8
WK QPGD
Sbjct: 122 WKLQPGD 128


>sp|POL1_TORVR|RNA1 polyprotein|Tomato ringspot virus (isolate raspberry)

Query: 3 KPQPGD 8
+PQPGD
Sbjct: 1650 EPQPGD 1655


>sp|HBSAG_DHBV3|LARGE envelope protein|Duck hepatitis B virus (strain

Query: 2 WKPQPGD 8
WK QPGD
Sbjct: 122 WKLQPGD 128


>sp|AC4_ABMVW|PROTEIN AC4|Abutilon mosaic virus (isolate West

Query: 2 WKPQPGDVI 10
W PQPG I
Sbjct: 20 WSPQPGQHI 28


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 SWKPQPGD 8
S KP PGD
Sbjct: 6062 SAKPPPGD 6069


>sp|HBSAG_DHBVQ|LARGE envelope protein|Duck hepatitis B virus (isolate

Query: 2 WKPQPGD 8
WK QPGD
Sbjct: 122 WKLQPGD 128


>sp|PORTL_BPN4|PROBABLE portal protein|Enterobacteria phage N4 (Bacteriophage N4)

Query: 1 SWKPQPGDV 9
+W+PQP V
Sbjct: 610 TWQPQPDPV 618


>sp|HBSAG_HPBDB|LARGE envelope protein|Duck hepatitis B virus (isolate

Query: 2 WKPQPGD 8
WK QPGD
Sbjct: 122 WKLQPGD 128


>sp|HBSAG_HPBDC|LARGE envelope protein|Duck hepatitis B virus (strain

Query: 2 WKPQPGD 8
WK QPGD
Sbjct: 122 WKLQPGD 128


>sp|HBSAG_DHBV1|LARGE envelope protein|Duck hepatitis B virus (strain

Query: 2 WKPQPGD 8
WK QPGD
Sbjct: 122 WKLQPGD 128


>sp|YR327_MIMIV|UNCHARACTERIZED protein R327|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 WKPQPGDV 9
W P+ GD+
Sbjct: 531 WNPKLGDI 538


>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)

Query: 2 WKPQPG 7
W PQPG
Sbjct: 730 WNPQPG 735


>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)

Query: 2 WKPQPG 7
W PQPG
Sbjct: 730 WNPQPG 735


>sp|POLG_FCVC6|GENOME polyprotein|Feline calicivirus (strain CFI/68 FIV)

Query: 2 WKPQP 6
WKP+P
Sbjct: 1164 WKPKP 1168


>sp|ORFC_PSHV1|UNCHARACTERIZED protein ORFC|Psittacid herpesvirus 1 (isolate Amazon

Query: 4 PQPGDVI 10
PQPGD I
Sbjct: 67 PQPGDKI 73


>sp|VOLD_BPP2|OLD nuclease|Escherichia phage P2 (Bacteriophage P2)

Query: 1 SWKPQPGDV 9
+WK PG +
Sbjct: 125 TWKKNPGGI 133


>sp|POL2_RRVS|RNA2 polyprotein|Raspberry ringspot virus (strain S)

Query: 2 WKPQPGDV 9
W P+P D+
Sbjct: 772 WPPKPTDI 779


>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United States/Urbana/1960)

Query: 2 WKPQP 6
WKP+P
Sbjct: 1165 WKPKP 1169


>sp|POLN_AURAV|POLYPROTEIN P1234|Aura virus (AURAV)

Query: 1 SWKPQPGDVI 10
S KP+ GD++
Sbjct: 889 STKPKKGDIV 898


>sp|CAPSD_MASV1|CAPSID polyprotein VP86|Mink astrovirus 1 (MAstV-1)

Query: 1 SWKPQPGDV 9
SWK Q GD+
Sbjct: 192 SWKLQRGDL 200




111|Sequence|551|560|PGDVIGYVVD

>sp|POL_ALVA|GAG-POL polyprotein|Avian leukosis virus subgroup A

Query: 1 PGDVIGYVVD 10
PG++I YV+D
Sbjct: 454 PGEIIKYVLD 463


>sp|POL_RSVP|GAG-POL polyprotein|Rous sarcoma virus subgroup C

Query: 1 PGDVIGYVVD 10
PG++I YV+D
Sbjct: 454 PGEIIKYVLD 463


>sp|POL_RSVSB|GAG-POL polyprotein|Rous sarcoma virus subgroup B

Query: 1 PGDVIGYVVD 10
PG++I YV+D
Sbjct: 454 PGEIIKYVLD 463


>sp|POL_ALV|GAG-POL polyprotein|Avian leukosis virus (ALV)

Query: 1 PGDVIGYVVD 10
PG++I YV+D
Sbjct: 454 PGEIIKYVLD 463


>sp|GAG_ALVA|GAG polyprotein|Avian leukosis virus subgroup A

Query: 1 PGDVIGYVVD 10
PG++I YV+D
Sbjct: 454 PGEIIKYVLD 463


>sp|GAG_RSVSB|GAG polyprotein|Rous sarcoma virus subgroup B

Query: 1 PGDVIGYVVD 10
PG++I YV+D
Sbjct: 454 PGEIIKYVLD 463


>sp|GAG_RSVP|GAG polyprotein|Rous sarcoma virus subgroup C

Query: 1 PGDVIGYVVD 10
PG++I YV+D
Sbjct: 454 PGEIIKYVLD 463


>sp|AC83_NPVAC|CAPSID-ASSOCIATED protein AC83|Autographa californica nuclear polyhedrosis virus

Query: 3 DVIGYVVD 10
DVIGYV D
Sbjct: 56 DVIGYVSD 63


>sp|VGLG_BDVV|ENVELOPE glycoprotein p57|Borna disease virus (strain V)

Query: 3 DVIGYVVD 10
D+IGY+V+
Sbjct: 302 DIIGYIVN 309


>sp|VGLG_BDV1|ENVELOPE glycoprotein p57|Borna disease virus 1 (BoDV-1)

Query: 3 DVIGYVVD 10
D+IGY+V+
Sbjct: 302 DIIGYIVN 309


>sp|POLG_PYFV1|GENOME polyprotein|Parsnip yellow fleck virus (isolate

Query: 1 PGDVIG 6
PGDV+G
Sbjct: 435 PGDVVG 440


>sp|RIR1_OSHVF|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Ostreid herpesvirus 1 (isolate France)

Query: 1 PGDVIGYVVD 10
PG + GY+ D
Sbjct: 312 PGAIAGYLTD 321


>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)

Query: 1 PGDVIGYVVD 10
PGD++ Y+++
Sbjct: 782 PGDLVEYIMN 791


>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)

Query: 1 PGDVIGYVVD 10
PGD++ Y+++
Sbjct: 782 PGDLVEYIMN 791


>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)

Query: 1 PGDVIGYVVD 10
PGD++ Y+++
Sbjct: 782 PGDLVEYIMN 791


>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)

Query: 1 PGDVIGYVVD 10
PGD++ Y+++
Sbjct: 782 PGDLVEYIMN 791


>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)

Query: 1 PGDVIGYVVD 10
PGD++ Y+++
Sbjct: 782 PGDLVEYIMN 791


>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)

Query: 1 PGDVIGYVVD 10
PGD++ Y+++
Sbjct: 782 PGDMVEYIMN 791


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 3 DVIGYV 8
DVIGYV
Sbjct: 1007 DVIGYV 1012


>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)

Query: 1 PGDVIGYVVD 10
PGD++ Y+++
Sbjct: 782 PGDLVEYIMN 791


>sp|VP4_LDCPR|OUTER capsid protein VP4|Lymantria dispar cypovirus 1 (isolate

Query: 3 DVIGYVVD 10
D+ GYV+D
Sbjct: 415 DMYGYVID 422


>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)

Query: 1 PGDVIGYVVD 10
PGD++ Y+++
Sbjct: 782 PGDLVEYIMN 791


>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)

Query: 1 PGDVIGYVVD 10
PGD++ Y+++
Sbjct: 782 PGDLVEYIMN 791


>sp|388R_IIV6|PUTATIVE MSV199 domain-containing protein 388R|Invertebrate iridescent

Query: 3 DVIGYVVD 10
DVIG+V D
Sbjct: 40 DVIGFVKD 47


>sp|UL95_SHV21|GENE 34 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 2 GDVIGYVV 9
GD+ GY+V
Sbjct: 263 GDMCGYIV 270


>sp|CAPSD_MDV1|CAPSID protein|Milk vetch dwarf virus (isolate

Query: 1 PGDVIGYVV 9
PG+++ Y++
Sbjct: 75 PGELVNYII 83


>sp|CAPSD_MDV9|CAPSID protein|Milk vetch dwarf virus (isolate

Query: 1 PGDVIGYVV 9
PG+++ Y++
Sbjct: 75 PGELVNYII 83


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2 GDVIGYVVD 10
GD + YVVD
Sbjct: 869 GDYLWYVVD 877


>sp|FIBER_BPT1|PROBABLE tail fiber protein|Escherichia phage T1 (Bacteriophage T1)

Query: 2 GDVIGYVVD 10
GD+ GYV D
Sbjct: 210 GDLSGYVND 218


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 2 GDVIGYVVD 10
GD + YVVD
Sbjct: 869 GDYLWYVVD 877




112|Sequence|556|565|GYVVDWCDHT

>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 2 YVVDWCD 8
Y+++WCD
Sbjct: 1635 YLMNWCD 1641


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 2 YVVDWCD 8
Y+++WCD
Sbjct: 1635 YLMNWCD 1641


>sp|DNMK_BPT5|DEOXYNUCLEOSIDE-5'-MONOPHOSPHATE kinase|Escherichia phage T5 (Enterobacteria phage

Query: 3 VVDWCDHT 10
++DWC+ T
Sbjct: 22 IIDWCNDT 29


>sp|VE94_NPVAC|EARLY 94 kDa protein|Autographa californica nuclear polyhedrosis virus

Query: 3 VVDWCDHT 10
++ WCD+T
Sbjct: 537 ILQWCDYT 544


>sp|YR541_MIMIV|PUTATIVE BTB/POZ domain-containing protein R541|Acanthamoeba polyphaga

Query: 5 DWCDHT 10
D+CDHT
Sbjct: 250 DYCDHT 255


>sp|VG29_BPML5|GENE 29 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 GYVVDWCDH 9
GY+ DW +H
Sbjct: 37 GYLADWSEH 45


>sp|G1P_BPIKE|GENE 1 protein|Salmonella phage IKe (Bacteriophage IKe)

Query: 3 VVDWCDH 9
V+DWC H
Sbjct: 107 VIDWCLH 113


>sp|GLYC_EMARV|ENVELOPE glycoprotein|European mountain ash ringspot-associated virus

Query: 2 YVVDWCDH 9
Y++D+CD+
Sbjct: 418 YIIDYCDY 425


>sp|TERL_BPMU|PROBABLE terminase, large subunit gp28|Escherichia phage Mu (Bacteriophage

Query: 1 GYVVDWCDH 9
G V DWC+
Sbjct: 326 GIVQDWCEQ 334


>sp|VF391_IIV6|UNCHARACTERIZED protein 391R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 GYVVDWCD 8
GY+ DW +
Sbjct: 125 GYITDWTE 132


>sp|POL1_BPMV|RNA1 polyprotein|Bean-pod mottle virus (strain Kentucky

Query: 3 VVDWCDH 9
+ D+CDH
Sbjct: 489 ITDFCDH 495


>sp|Y071_OSHVF|UNCHARACTERIZED protein ORF71|Ostreid herpesvirus 1 (isolate France)

Query: 3 VVDWCD 8
V+DWC+
Sbjct: 165 VLDWCN 170


>sp|RPOL_BPKMV|DNA-DIRECTED RNA polymerase|Pseudomonas phage phiKMV

Query: 5 DWCD 8
DWCD
Sbjct: 242 DWCD 245


>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)

Query: 5 DWCD 8
DWCD
Sbjct: 1974 DWCD 1977


>sp|POL1_BRAV|RNA1 polyprotein|Blackcurrant reversion association virus (BRAV)

Query: 2 YVVDWC 7
YV +WC
Sbjct: 2032 YVANWC 2037


>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain

Query: 3 VVDWCDH 9
V+D CDH
Sbjct: 640 VLDQCDH 646


>sp|VNS2_EHDV2|NON-STRUCTURAL protein NS2|Epizootic hemorrhagic disease virus 2

Query: 1 GYVVDWCD 8
GYV++ CD
Sbjct: 55 GYVLEICD 62


>sp|VF287_IIV3|UNCHARACTERIZED protein 056L|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 VVDWCD 8
V +WCD
Sbjct: 11 VAEWCD 16


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 6 WCDHT 10
WCD+T
Sbjct: 2775 WCDYT 2779


>sp|CAPSD_AAV2S|CAPSID protein VP1|Adeno-associated virus 2 (isolate Srivastava/1982)

Query: 1 GYVVDWCDHT 10
GY+ DW + T
Sbjct: 5 GYLPDWLEDT 14


>sp|NEF_SIVML|PROTEIN Nef|Simian immunodeficiency virus (isolate K78)

Query: 1 GYVVDWCDHT 10
G + DW D+T
Sbjct: 151 GIIPDWQDYT 160


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 6 WCDHT 10
WCD+T
Sbjct: 2775 WCDYT 2779


>sp|NEF_SIVMA|PROTEIN Nef|Simian immunodeficiency virus (isolate 1A11)

Query: 1 GYVVDWCDHT 10
G + DW D+T
Sbjct: 151 GIIPDWQDYT 160


>sp|NEF_SIVM2|PROTEIN Nef|Simian immunodeficiency virus (isolate Mm251)

Query: 1 GYVVDWCDHT 10
G + DW D+T
Sbjct: 151 GIIPDWQDYT 160


>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 1 GYVVDWCDHT 10
G+ +D C HT
Sbjct: 40 GWCLDCCQHT 49


>sp|SPIKE_ADEM1|FIBER protein|Murine adenovirus A serotype 1

Query: 5 DWCDH 9
DW DH
Sbjct: 530 DWADH 534


>sp|RIR1_OSHVF|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Ostreid herpesvirus 1 (isolate France)

Query: 1 GYVVDW 6
GY+ DW
Sbjct: 317 GYLTDW 322


>sp|NSP4_WTV|NON-STRUCTURAL protein 4|Wound tumor virus (WTV)

Query: 2 YVVDWCDH 9
YV W +H
Sbjct: 226 YVTSWAEH 233


>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 1 GYVVDWCDHT 10
G+ +D C HT
Sbjct: 40 GWCLDCCQHT 49


>sp|RDRP_MPRVN|RNA-DIRECTED RNA polymerase VP2|Micromonas pusilla reovirus (isolate

Query: 6 WCDHT 10
WCD T
Sbjct: 437 WCDET 441


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 3 VVDWCDH 9
++DW +H
Sbjct: 1948 IIDWLEH 1954


>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])

Query: 1 GYVVDWCDHT 10
G+ +D C HT
Sbjct: 40 GWCLDCCQHT 49


>sp|NEF_HV192|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 119 GYFPDWQNYT 128


>sp|DNMT_FRG3G|PROBABLE DNA (cytosine-5)-methyltransferase|Frog virus 3 (isolate Goorha)

Query: 2 YVVDWCDHT 10
YVVD+C ++
Sbjct: 130 YVVDYCAYS 138


>sp|IAP1_NPVOP|APOPTOSIS inhibitor 1|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 2 YVVDWCDH 9
YV++ CDH
Sbjct: 6 YVINVCDH 13


>sp|NEF_HV193|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 122 GYFPDWQNYT 131


>sp|NEF_HV1BN|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 131 GYFPDWQNYT 140


>sp|NSP1_ROTBB|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Cow/United

Query: 1 GYVVDWCDHT 10
G+ +D C HT
Sbjct: 40 GWCLDCCQHT 49


>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 1 GYVVDWCDHT 10
G+ +D C HT
Sbjct: 40 GWCLDCCQHT 49


>sp|NEF_HV190|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 120 GYFPDWQNYT 129


>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 1 GYVVDWCDHT 10
G+ +D C HT
Sbjct: 40 GWCLDCCQHT 49


>sp|NEF_HV1M2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 114 GYFPDWQNYT 123


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 VVDWCDH 9
V+ WC H
Sbjct: 3181 VIIWCGH 3187


>sp|NEF_HV1Y2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 129 GYFPDWQNYT 138


>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 3 VVDWCDH 9
++D CDH
Sbjct: 679 LIDLCDH 685


>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 1 GYVVDWCDHT 10
G+ +D C HT
Sbjct: 40 GWCLDCCQHT 49


>sp|NEF_HV1H3|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 119 GYFPDWQNYT 128


>sp|NEF_HV1S3|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 118 GYFPDWQNYT 127


>sp|NEF_HV1MP|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 114 GYFPDWQNYT 123


>sp|NEF_HV1A2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 123 GYFPDWQNYT 132


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 VVDWCDH 9
V+ WC H
Sbjct: 3151 VIIWCGH 3157


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 2 YVVDWCDH 9
++V WC H
Sbjct: 2954 HLVGWCAH 2961


>sp|NEF_HV1VI|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 119 GYFPDWQNYT 128


>sp|NSP1_ROTPY|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Pig/Mexico/YM/1983/G11P9[7])

Query: 1 GYVVDWCDHT 10
G+ +D C HT
Sbjct: 40 GWCLDCCQHT 49


>sp|NSP1_ROTPG|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Pig/United

Query: 1 GYVVDWCDHT 10
G+ +D C HT
Sbjct: 40 GWCLDCCQHT 49


>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])

Query: 1 GYVVDWCDHT 10
G+ +D C HT
Sbjct: 40 GWCLDCCQHT 49


>sp|YR034_MIMIV|UNCHARACTERIZED protein R34|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GYVVDWCDH 9
+V+D+ DH
Sbjct: 95 AFVIDYLDH 103


>sp|DPOL_IIV6|DNA polymerase 037L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 YVVDWCDH 9
+V++W DH
Sbjct: 662 HVMEWDDH 669


>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United

Query: 1 GYVVDWCDHT 10
G+ +D C HT
Sbjct: 40 GWCLDCCQHT 49


>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 1 GYVVDWCDHT 10
G+ +D C HT
Sbjct: 40 GWCLDCCQHT 49


>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 1 GYVVDWCDHT 10
G+ +D C HT
Sbjct: 40 GWCLDCCQHT 49


>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 120 GYFPDWQNYT 129


>sp|RDRP_SCPMV|REPLICASE polyprotein P2AB|Southern cowpea mosaic virus (SCPMV)

Query: 2 YVVDWCDH 9
Y V++C H
Sbjct: 830 YAVEFCSH 837


>sp|NEF_HV1V9|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 120 GYFPDWHNYT 129


>sp|NEF_HV1H2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 119 GYFPDWQNYT 128


>sp|NEF_HV112|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 119 GYFPDWQNYT 128


>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 116 GYFPDWQNYT 125


>sp|NEF_HV1LW|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 119 GYFPDWQNYT 128


>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GYVVDWCDHT 10
GY DW ++T
Sbjct: 119 GYFPDWQNYT 128




113|Sequence|561|570|WCDHTQDVLG

>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 1 WCDHTQ 6
+CDH+Q
Sbjct: 901 YCDHSQ 906


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 WCDHTQ 6
+CDH+Q
Sbjct: 901 YCDHSQ 906


>sp|DNBI_EHV1V|MAJOR DNA-binding protein|Equine herpesvirus 1 (strain V592)

Query: 1 WCDHTQ 6
+CDH+Q
Sbjct: 909 YCDHSQ 914


>sp|DNBI_EHV1B|MAJOR DNA-binding protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 WCDHTQ 6
+CDH+Q
Sbjct: 909 YCDHSQ 914


>sp|DNBI_EHV1|MAJOR DNA-binding protein|Equine herpesvirus 1 (strain HVS25A)

Query: 1 WCDHTQ 6
+CDH+Q
Sbjct: 75 YCDHSQ 80


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 CDHTQDVLG 10
CD +D+LG
Sbjct: 390 CDVVKDILG 398


>sp|YR541_MIMIV|PUTATIVE BTB/POZ domain-containing protein R541|Acanthamoeba polyphaga

Query: 1 WCDHTQ 6
+CDHT+
Sbjct: 251 YCDHTK 256


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 CDHTQDVLG 10
CD +D+LG
Sbjct: 390 CDVVKDILG 398


>sp|V228_FOWPN|PUTATIVE ankyrin repeat protein FPV228|Fowlpox virus (strain NVSL) (FPV)

Query: 2 CDHTQDVLG 10
C +T+D+LG
Sbjct: 65 CINTRDILG 73


>sp|RDRP_CPMV1|RNA-DIRECTED RNA polymerase|Cryphonectria parasitica mitovirus 1 (strain

Query: 1 WCDHTQD 7
WC TQ+
Sbjct: 98 WCTRTQE 104




114|Sequence|566|575|QDVLGDFQWK

>sp|POL_BLVAU|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Australian)

Query: 1 QDVLGDFQW 9
Q VLGD QW
Sbjct: 801 QTVLGDLQW 809


>sp|POL_BLVJ|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Japanese

Query: 1 QDVLGDFQW 9
Q VLGD QW
Sbjct: 801 QAVLGDLQW 809


>sp|POL_SMRVH|GAG-PRO-POL polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 1 QDVLGDFQW 9
Q +LGD QW
Sbjct: 1256 QKLLGDIQW 1264


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1 QDVLGDFQW 9
Q +LG+ QW
Sbjct: 808 QSMLGELQW 816


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1 QDVLGDFQW 9
Q +LG+ QW
Sbjct: 808 QSMLGELQW 816


>sp|YR367_MIMIV|UNCHARACTERIZED protein R367|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 GDFQWK 10
GDF WK
Sbjct: 20 GDFSWK 25


>sp|US03_PSHV1|PROTEIN kinase US3 homolog|Psittacid herpesvirus 1 (isolate Amazon

Query: 5 GDFQWK 10
GD QWK
Sbjct: 245 GDLQWK 250


>sp|DUHM_BPW14|DEOXYURIDYLATE hydroxymethyltransferase|Delftia phage PhiW-14 (Deftia acidovorans

Query: 4 LGDFQW 9
LGD+QW
Sbjct: 213 LGDYQW 218


>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P

Query: 3 VLGDFQW 9
+LG FQW
Sbjct: 232 ILGAFQW 238


>sp|Y102_OSHVF|UNCHARACTERIZED protein ORF102|Ostreid herpesvirus 1 (isolate France)

Query: 1 QDVLGDFQWK 10
QD LG+ Q+K
Sbjct: 155 QDALGNTQYK 164


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 1 QDVLGDFQW 9
Q +LG+ QW
Sbjct: 827 QVILGEIQW 835


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 4 LGDFQWK 10
LG F+WK
Sbjct: 680 LGSFKWK 686


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 4 LGDFQWK 10
LG F+WK
Sbjct: 683 LGSFKWK 689


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1 QDVLGDFQW 9
Q +LG+ QW
Sbjct: 829 QALLGEIQW 837


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1 QDVLGDFQW 9
Q +LG+ QW
Sbjct: 829 QALLGEIQW 837


>sp|YR866_MIMIV|UNCHARACTERIZED protein R866|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 QDVLGDFQW 9
QDVL D Q+
Sbjct: 143 QDVLSDLQF 151


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1 QDVLGDFQW 9
Q +LG+ QW
Sbjct: 829 QALLGEIQW 837


>sp|MOBB_BPT4|PROBABLE mobile endonuclease B|Enterobacteria phage T4 (Bacteriophage T4)

Query: 5 GDFQWK 10
G FQWK
Sbjct: 174 GGFQWK 179


>sp|VIE3_MUHVS|IMMEDIATE-EARLY protein 3|Murid herpesvirus 1 (strain Smith)

Query: 1 QDVLGDFQW 9
+D+LGD+++
Sbjct: 60 EDMLGDYEY 68


>sp|VIE1_MUHVS|IMMEDIATE-EARLY protein 1|Murid herpesvirus 1 (strain Smith)

Query: 1 QDVLGDFQW 9
+D+LGD+++
Sbjct: 60 EDMLGDYEY 68


>sp|POL_BPNNR|DNA Primase-polymerase|Nitratiruptor phage NrS-1

Query: 1 QDVLGDFQWK 10
++++ DFQW+
Sbjct: 647 KNIVNDFQWE 656


>sp|POL_IPHA|INTRACISTERNAL A-particle Pol-related polyprotein|Hamster intracisternal

Query: 1 QDVLGDFQW 9
Q +LGD W
Sbjct: 253 QKLLGDINW 261


>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 3 VLGDFQWK 10
+LGD Q+K
Sbjct: 1240 ILGDIQYK 1247


>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 1 QDVLGDFQW 9
Q +LGD W
Sbjct: 1123 QKLLGDINW 1131


>sp|POL_IPMAI|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 1 QDVLGDFQW 9
Q +LGD W
Sbjct: 183 QKLLGDINW 191


>sp|POL_IPMA|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 1 QDVLGDFQW 9
Q +LGD W
Sbjct: 264 QKLLGDINW 272


>sp|A1_BPQBE|MINOR capsid protein A1|Escherichia virus Qbeta (Bacteriophage Q-beta)

Query: 1 QDVLGDFQWK 10
+D+LG+ +W+
Sbjct: 205 KDLLGNTKWR 214


>sp|POL_SRV1|GAG-PRO-POL polyprotein|Simian retrovirus SRV-1

Query: 1 QDVLGDFQW 9
Q +LGD W
Sbjct: 1172 QKLLGDINW 1180


>sp|POL_SRV2|GAG-PRO-POL polyprotein|Simian retrovirus SRV-2

Query: 1 QDVLGDFQW 9
Q +LGD W
Sbjct: 1168 QKLLGDINW 1176


>sp|POL_FMVD|ENZYMATIC polyprotein|Figwort mosaic virus (strain DxS)

Query: 5 GDFQWK 10
G FQWK
Sbjct: 358 GHFQWK 363


>sp|POL_MPMV|GAG-PRO-POL polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian

Query: 1 QDVLGDFQW 9
Q +LGD W
Sbjct: 1171 QKLLGDINW 1179




115|Sequence|571|580|DFQWKNVGPN

>sp|POL_COYMV|POLYPROTEIN P3|Commelina yellow mottle virus (CoYMV)

Query: 1 DFQWKNVGPN 10
D +NVGPN
Sbjct: 965 DLSRRNVGPN 974


>sp|RDRP_SBWMN|REPLICASE large subunit|Soil-borne wheat mosaic virus (strain

Query: 4 WKNVGPN 10
WKN PN
Sbjct: 525 WKNYAPN 531


>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 DFQWKNVGP 9
DF+++++GP
Sbjct: 331 DFRYESIGP 339


>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 DFQWKNVGP 9
DF+++++GP
Sbjct: 330 DFRYESIGP 338


>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 DFQWKNVGP 9
DF+++++GP
Sbjct: 331 DFRYESIGP 339


>sp|YR367_MIMIV|UNCHARACTERIZED protein R367|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DFQWKN 6
DF WKN
Sbjct: 21 DFSWKN 26


>sp|Y059_OSHVF|UNCHARACTERIZED protein ORF59|Ostreid herpesvirus 1 (isolate France)

Query: 2 FQWKNVGP 9
F++KN+GP
Sbjct: 259 FKFKNLGP 266


>sp|RDRP_CPMV1|RNA-DIRECTED RNA polymerase|Cryphonectria parasitica mitovirus 1 (strain

Query: 1 DFQWKNVGPN 10
D W+ GPN
Sbjct: 117 DHIWQTAGPN 126


>sp|IBMP_CSVMV|PUTATIVE transactivator/viroplasmin protein|Cassava vein mosaic virus

Query: 2 FQWKNV 7
+QWKN+
Sbjct: 84 YQWKNI 89


>sp|IBMP_CYLCV|TRANSACTIVATOR/VIROPLASMIN protein|Cestrum yellow leaf curling virus

Query: 2 FQWKNVGPN 10
F+WK PN
Sbjct: 290 FEWKKDEPN 298


>sp|CAPS4_MIMIV|PROBABLE capsid protein 4|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DFQWKNVGPN 10
+ Q KNV PN
Sbjct: 473 EMQLKNVNPN 482


>sp|TYSY_IIV6|PROBABLE thymidylate synthase 225R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 FQWKNVGPN 10
FQW++ G N
Sbjct: 111 FQWRHYGEN 119


>sp|388R_IIV6|PUTATIVE MSV199 domain-containing protein 388R|Invertebrate iridescent virus

Query: 2 FQWKNVGPN 10
F +KN+ PN
Sbjct: 279 FSYKNLHPN 287


>sp|POL1_RCMV|RNA1 polyprotein|Red clover mottle virus (RCMV)

Query: 1 DFQWKNVG 8
DF WK +G
Sbjct: 370 DFAWKILG 377


>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985

Query: 1 DFQWKNVGPN 10
DF W + PN
Sbjct: 240 DFHWLILNPN 249


>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985

Query: 1 DFQWKNVGPN 10
DF W + PN
Sbjct: 240 DFHWLILNPN 249


>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956

Query: 1 DFQWKNVGPN 10
DF W + PN
Sbjct: 240 DFHWLMLDPN 249


>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963

Query: 1 DFQWKNVGPN 10
DF W + PN
Sbjct: 240 DFHWLMLDPN 249


>sp|HEMA_I34A0|HEMAGGLUTININ A virus (strain A/Fowl

Query: 1 DFQWKNVGPN 10
DF W + PN
Sbjct: 240 DFHWLILDPN 249


>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48

Query: 4 WKNVGPN 10
WK +GPN
Sbjct: 349 WKWLGPN 355


>sp|YR104_MIMIV|PUTATIVE transposase R104|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 FQWKNV 7
F WKNV
Sbjct: 297 FSWKNV 302




116|Sequence|576|585|NVGPNTTSTV

>sp|052L_FRG3G|UNCHARACTERIZED protein 052L|Frog virus 3 (isolate Goorha)

Query: 2 VGPNTTSTV 10
VGPNTTS V
Sbjct: 122 VGPNTTSGV 130


>sp|POLR_NORAV|REPLICATION polyprotein|Nora virus

Query: 2 VGPNTTSTV 10
+G NTTST+
Sbjct: 521 IGSNTTSTL 529


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 GPNTTST 9
GPN TST
Sbjct: 1264 GPNFTST 1270


>sp|443R_IIV6|UNCHARACTERIZED protein 443R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 NVGPNTTSTV 10
N+ PN TSTV
Sbjct: 888 NITPNATSTV 897


>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)

Query: 3 GPNTTSTV 10
GP TTS V
Sbjct: 182 GPETTSAV 189


>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus

Query: 1 NVGPNTTS 8
N GPNTT+
Sbjct: 390 NTGPNTTT 397


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 GPNTTST 9
GPN TST
Sbjct: 1271 GPNFTST 1277




117|Sequence|581|590|TTSTVISTDA

***** No hits found ******


118|Sequence|586|595|ISTDAFRPGV

>sp|DPOL_ASFWA|DNA polymerase beta|African swine fever virus (isolate

Query: 1 ISTDAFRP 8
I TDA+RP
Sbjct: 847 IQTDAWRP 854


>sp|DPOL_ASFP4|DNA polymerase beta|African swine fever virus (isolate

Query: 1 ISTDAFRP 8
I TDA+RP
Sbjct: 847 IQTDAWRP 854


>sp|DPOL_ASFM2|DNA polymerase beta|African swine fever virus (isolate

Query: 1 ISTDAFRP 8
I TDA+RP
Sbjct: 847 IQTDAWRP 854


>sp|DPOL_ASFL6|DNA polymerase beta|African swine fever virus (isolate

Query: 1 ISTDAFRP 8
I TDA+RP
Sbjct: 847 IQTDAWRP 854


>sp|DPOL_ASFK5|DNA polymerase beta|African swine fever virus (isolate

Query: 1 ISTDAFRP 8
I TDA+RP
Sbjct: 847 IQTDAWRP 854


>sp|DPOL_ASFB7|DNA polymerase beta|African swine fever virus (strain

Query: 1 ISTDAFRP 8
I TDA+RP
Sbjct: 851 IQTDAWRP 858


>sp|UL87_ALHV1|UNCHARACTERIZED gene 24 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 ISTDAFRPGV 10
++TD F PG+
Sbjct: 117 LTTDTFIPGI 126


>sp|CAPSD_BPKMV|MAJOR capsid protein|Pseudomonas phage phiKMV

Query: 4 DAFRPGV 10
DAF PGV
Sbjct: 148 DAFSPGV 154


>sp|BXDN_CBDP|NON-TOXIC nonhemagglutinin type D|Clostridium botulinum D phage (Clostridium

Query: 1 ISTDAFRP 8
++TD FRP
Sbjct: 1146 VNTDLFRP 1153


>sp|BXCN_CBCP|NON-TOXIC nonhemagglutinin type C|Clostridium botulinum C phage (Clostridium

Query: 1 ISTDAFRP 8
++TD FRP
Sbjct: 1146 VNTDLFRP 1153


>sp|OE66_NPVOP|OCCLUSION-DERIVED virus envelope protein E66|Orgyia pseudotsugata multicapsid

Query: 2 STDAFRPGV 10
ST +FRP V
Sbjct: 428 STQSFRPAV 436


>sp|CAPSD_BPBMU|MAJOR capsid protein|Burkholderia phage BcepMu (isolate -/United

Query: 2 STDAFRP 8
STD FRP
Sbjct: 285 STDIFRP 291


>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41

Query: 3 TDAFRPGV 10
TD FRP V
Sbjct: 117 TDPFRPSV 124


>sp|VL2_OVPVD|MINOR capsid protein L2|Odocoileus virginianus papillomavirus 1 (DPV)

Query: 5 AFRPGV 10
AFRPG+
Sbjct: 107 AFRPGI 112


>sp|VL2_PAPVE|MINOR capsid protein L2|European elk papillomavirus (EEPV)

Query: 5 AFRPGV 10
AFRPG+
Sbjct: 99 AFRPGI 104




119|Sequence|591|600|FRPGVRYDFR

>sp|Y054_OSHVF|UNCHARACTERIZED protein ORF54|Ostreid herpesvirus 1 (isolate France)

Query: 1 FRPGVRYDFR 10
F P VRYD++
Sbjct: 730 FIPAVRYDYK 739


>sp|POL_SIVVT|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 3 PGVRYDF 9
PG+RY F
Sbjct: 758 PGIRYQF 764


>sp|POL_SIVV1|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 3 PGVRYDF 9
PG+RY F
Sbjct: 754 PGIRYQF 760


>sp|POL_SIVG1|GAG-POL polyprotein|Simian immunodeficiency virus agm.grivet (isolate

Query: 3 PGVRYDF 9
PG+RY F
Sbjct: 749 PGIRYQF 755


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 2 RPGVRYDF 9
RP VRYD
Sbjct: 2932 RPHVRYDL 2939


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 RPGVRYDF 9
RP VRYD
Sbjct: 2932 RPHVRYDL 2939


>sp|CAPSD_MYRV9|INNER capsid protein VP2|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 2 RPGVRYDFR 10
RP VR +FR
Sbjct: 939 RPAVRNNFR 947


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1 FRPGVRYDFR 10
+ PG RY +R
Sbjct: 687 YGPGTRYSWR 696


>sp|POL1_BPMV|RNA1 polyprotein|Bean-pod mottle virus (strain Kentucky

Query: 1 FRPGVRYD 8
+PGV YD
Sbjct: 601 LKPGVEYD 608


>sp|POL_SIVCZ|GAG-POL polyprotein|Simian immunodeficiency virus (isolate CPZ

Query: 3 PGVRYDF 9
PGVRY +
Sbjct: 676 PGVRYQY 682


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PGVRY +
Sbjct: 720 PGVRYQY 726


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PGVRY +
Sbjct: 725 PGVRYQY 731


>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PGVRY +
Sbjct: 728 PGVRYQY 734


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PGVRY +
Sbjct: 722 PGVRYQY 728


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PGVRY +
Sbjct: 722 PGVRYQY 728


>sp|Y045_ATV|UNCHARACTERIZED protein ORF45|Acidianus two-tailed virus (ATV)

Query: 1 FRPGVRY 7
+RP VRY
Sbjct: 32 YRPSVRY 38


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 3 PGVRYDFR 10
PG RY +R
Sbjct: 689 PGTRYSWR 696


>sp|POL_SIVVG|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 3 PGVRYDF 9
PG RY F
Sbjct: 755 PGTRYQF 761


>sp|POL_SIVMB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate MB66)

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 726 PGIRYQY 732


>sp|POL_SIVEK|GAG-POL polyprotein|Simian immunodeficiency virus (isolate EK505)

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 736 PGIRYQY 742


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 728 PGIRYQY 734


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 737 PGIRYQY 743


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 737 PGIRYQY 743


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 721 PGIRYQY 727


>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 728 PGIRYQY 734


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 724 PGIRYQY 730


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 724 PGIRYQY 730


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 726 PGIRYQY 732


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 724 PGIRYQY 730


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 727 PGIRYQY 733


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 722 PGIRYQY 728


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 733 PGIRYQY 739


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 732 PGIRYQY 738


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 726 PGIRYQY 732


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 727 PGIRYQY 733


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 731 PGIRYQY 737


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 727 PGIRYQY 733


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 731 PGIRYQY 737


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 727 PGIRYQY 733


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 739 PGIRYQY 745


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 727 PGIRYQY 733


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 739 PGIRYQY 745


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 726 PGIRYQY 732


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 729 PGIRYQY 735


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 727 PGIRYQY 733


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 722 PGIRYQY 728


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 723 PGIRYQY 729


>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 PGVRYDF 9
PG+RY +
Sbjct: 727 PGIRYQY 733


>sp|NS7A_BCHK9|NON-STRUCTURAL protein 7a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 4 GVRYDF 9
GV+YDF
Sbjct: 156 GVKYDF 161


>sp|G3P_BPIF1|ATTACHMENT protein G3P|Escherichia phage If1 (Bacteriophage If1)

Query: 1 FRPGVRYDF 9
F PG Y+F
Sbjct: 413 FAPGKEYEF 421




120|Sequence|596|605|RYDFRIYGLS

>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 YDFRIYGLS 10
+DF IYG++
Sbjct: 2870 FDFDIYGVT 2878


>sp|VE6_MMPV1|PROTEIN E6|Macaca mulata papillomavirus 1 (Rhpv

Query: 1 RYDFRIYGLS 10
RY++ IYG +
Sbjct: 108 RYEYSIYGCT 117


>sp|NSP2_ROTA1|NON-STRUCTURAL protein 2|Rotavirus A (strain

Query: 2 YDFRIYGLS 10
YD ++YGL+
Sbjct: 43 YDTQVYGLA 51


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 2 YDFRIYG 8
YDF IYG
Sbjct: 787 YDFLIYG 793


>sp|L_EBLV2|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 2 (strain

Query: 2 YDFRIYG 8
YDF IYG
Sbjct: 786 YDFLIYG 792


>sp|L_EBLV1|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 1 (strain

Query: 2 YDFRIYG 8
YDF IYG
Sbjct: 786 YDFLIYG 792


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 2 YDFRIYG 8
YDF IYG
Sbjct: 786 YDFLIYG 792


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 2 YDFRIYG 8
YDF IYG
Sbjct: 786 YDFLIYG 792


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 2 YDFRIYG 8
YDF IYG
Sbjct: 786 YDFLIYG 792


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 2 YDFRIYG 8
YDF IYG
Sbjct: 786 YDFLIYG 792


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 2 YDFRIYG 8
YDF IYG
Sbjct: 786 YDFLIYG 792


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 2 YDFRIYG 8
YDF IYG
Sbjct: 786 YDFLIYG 792


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 2 YDFRIYG 8
YDF IYG
Sbjct: 786 YDFLIYG 792


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 2 YDFRIYG 8
YDF IYG
Sbjct: 786 YDFLIYG 792


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 2 YDFRIYG 8
YDF IYG
Sbjct: 786 YDFLIYG 792


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 2 YDFRIYG 8
YDF IYG
Sbjct: 787 YDFLIYG 793


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 2 YDFRIYG 8
YDF IYG
Sbjct: 786 YDFLIYG 792


>sp|VU4_ELHVK|PROTEIN U4|Elephantid herpesvirus 1 (isolate Asian

Query: 4 FRIYGLS 10
FR+YGLS
Sbjct: 62 FRMYGLS 68




121|Sequence|601|610|IYGLSTKRIA

>sp|L_TIBVC|RNA-DIRECTED RNA polymerase L|Tibrogargan virus (strain CS132) (TIBV)

Query: 1 IYGLSTKR 8
I GLSTKR
Sbjct: 800 ILGLSTKR 807




122|Sequence|606|615|TKRIACLLEK

***** No hits found ******


123|Sequence|611|620|CLLEKKTGYS

>sp|RDRP_APRVF|RNA-DIRECTED RNA polymerase VP2|Aedes pseudoscutellaris reovirus (isolate

Query: 3 LEKKTGYS 10
LEKK GY+
Sbjct: 241 LEKKNGYT 248


>sp|VF257_ASFP4|TRANSMEMBRANE protein C257L|African swine fever virus (isolate

Query: 1 CLLEKKTG 8
CL+ KKTG
Sbjct: 100 CLINKKTG 107


>sp|VF257_ASFWA|TRANSMEMBRANE protein C257L|African swine fever virus (isolate

Query: 1 CLLEKKTG 8
CL+ KKTG
Sbjct: 100 CLINKKTG 107


>sp|VF257_ASFB7|TRANSMEMBRANE protein C257L|African swine fever virus (strain

Query: 1 CLLEKKTG 8
CL+ KKTG
Sbjct: 100 CLINKKTG 107


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 1 CLLEKKTGY 9
C LE +TGY
Sbjct: 918 CKLENETGY 926


>sp|YL720_MIMIV|ENDONUCLEASE 8-like L720|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 CLLEKKTGYS 10
CL E KT Y+
Sbjct: 114 CLAEIKTNYT 123


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 CLLEKKTGY 9
C+L +TGY
Sbjct: 914 CILANETGY 922


>sp|VINT_BPP21|INTEGRASE phage P21 (Bacteriophage 21)

Query: 1 CLLEKKTG 8
C L+K+TG
Sbjct: 17 CKLDKRTG 24


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 CLLEKKTGY 9
C+L +TGY
Sbjct: 914 CILTNETGY 922




124|Sequence|616|625|KTGYSQELAP

>sp|MAF_AVIS4|TRANSFORMING protein Maf|Avian musculoaponeurotic fibrosarcoma virus AS42

Query: 2 TGYSQELAP 10
TGY Q+L P
Sbjct: 95 TGYPQQLNP 103


>sp|TERL_BPT7|TERMINASE, large subunit|Escherichia phage T7 (Bacteriophage T7)

Query: 4 YSQELAP 10
YSQ LAP
Sbjct: 237 YSQRLAP 243




125|Sequence|621|630|QELAPSDNPH

>sp|PSBD_BPSYR|PHOTOSYSTEM II D2 protein|Synechococcus phage S-RSM2

Query: 3 LAPSDNPH 10
LAP D PH
Sbjct: 328 LAPVDQPH 335


>sp|PSBD_BPSYW|PHOTOSYSTEM II D2 protein|Synechococcus phage S-WHM1

Query: 3 LAPSDNPH 10
LAP D PH
Sbjct: 328 LAPIDQPH 335


>sp|PSBD_BPSYS|PHOTOSYSTEM II D2 protein|Synechococcus phage syn9

Query: 3 LAPSDNPH 10
+AP D PH
Sbjct: 328 MAPVDQPH 335


>sp|PSBD_BPSYP|PHOTOSYSTEM II D2 protein|Synechococcus phage S-PM2

Query: 3 LAPSDNPH 10
+AP D PH
Sbjct: 330 MAPVDQPH 337


>sp|P64_BYVU|64 kDa protein|Beet yellows virus (isolate Ukraine)

Query: 4 APSDNP 9
+PSDNP
Sbjct: 233 SPSDNP 238


>sp|VF224_IIV3|PROBABLE cysteine proteinase 024R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 ELAPSDNPH 10
+LAPSD P+
Sbjct: 447 KLAPSDGPN 455


>sp|POL2_BBWVS|RNA2 polyprotein|Broad bean wilt virus 1

Query: 1 QELAPSDNPH 10
+AP DNP+
Sbjct: 258 HRVAPGDNPN 267


>sp|LT_POVBO|LARGE T antigen|Bovine polyomavirus (BPyV) (Bos taurus

Query: 1 QELAPSDN 8
+EL PSDN
Sbjct: 97 EELEPSDN 104


>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 1 QELAPSDNP 9
QEL+ S NP
Sbjct: 2113 QELSQSQNP 2121


>sp|PHOSP_HRSV1|PHOSPHOPROTEIN respiratory syncytial virus B

Query: 1 QELAPSDNP 9
++L PSDNP
Sbjct: 89 EDLTPSDNP 97


>sp|CAPSD_AQRVG|INNER capsid protein VP3|Aquareovirus G (isolate American grass

Query: 3 LAPSDNPH 10
L P+ NPH
Sbjct: 109 LVPTSNPH 116


>sp|PHOSP_HRSVB|PHOSPHOPROTEIN respiratory syncytial virus B

Query: 1 QELAPSDNP 9
++L PSDNP
Sbjct: 89 EDLTPSDNP 97




126|Sequence|626|635|SDNPHVLVDT

>sp|DNBI_EHV2|MAJOR DNA-binding protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 DNPHVLVD 9
DNPHV+ D
Sbjct: 1017 DNPHVIRD 1024


>sp|POLN_SAV1|POLYPROTEIN P1234|Alphavirus salmon subtype 1 (SAV1)

Query: 4 PHVLVDT 10
PHVLVDT
Sbjct: 1178 PHVLVDT 1184


>sp|POLN_SAV2|POLYPROTEIN P1234|Alphavirus salmon subtype 2 (SAV2)

Query: 4 PHVLVDT 10
PHVLVDT
Sbjct: 1177 PHVLVDT 1183


>sp|POLN_KYMVJ|NON-STRUCTURAL replication polyprotein|Kennedya yellow mosaic virus (strain

Query: 1 SDNPHVL 7
SDNPHVL
Sbjct: 1448 SDNPHVL 1454


>sp|RDRP_TMVRA|REPLICASE large subunit|Tobacco mosaic virus (strain Rakkyo)

Query: 2 DNPHVLV 8
D+PHVLV
Sbjct: 1066 DSPHVLV 1072


>sp|RDRP_TMV|REPLICASE large subunit|Tobacco mosaic virus (strain vulgare)

Query: 2 DNPHVLV 8
D+PHVLV
Sbjct: 1066 DSPHVLV 1072


>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978

Query: 2 DNPHVLVD 9
DNPH ++D
Sbjct: 69 DNPHRILD 76


>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978

Query: 2 DNPHVLVD 9
DNPH ++D
Sbjct: 69 DNPHRILD 76


>sp|RDRP_TMVOM|REPLICASE large subunit|Tobacco mosaic virus (strain OM)

Query: 2 DNPHVLV 8
D+PHVLV
Sbjct: 1066 DSPHVLV 1072


>sp|RDRP_TMVKR|REPLICASE large subunit|Tobacco mosaic virus (strain Korean

Query: 2 DNPHVLV 8
D+PHVLV
Sbjct: 1066 DSPHVLV 1072


>sp|RDRP_TMVB|REPLICASE large subunit|Tobacco mosaic virus (strain B935A)

Query: 2 DNPHVLV 8
D+PHVLV
Sbjct: 1066 DSPHVLV 1072


>sp|VP43_NPVAC|43 kDa protein|Autographa californica nuclear polyhedrosis virus

Query: 2 DNPHVL 7
DNPH+L
Sbjct: 209 DNPHLL 214


>sp|NS2A_CVBLY|NON-STRUCTURAL protein 2a|Bovine coronavirus (strain LY-138) (BCoV)

Query: 2 DNPHVL 7
DNPH+L
Sbjct: 86 DNPHIL 91


>sp|NS2A_CVMJH|NON-STRUCTURAL protein 2a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 DNPHVL 7
DNPH+L
Sbjct: 87 DNPHML 92


>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976

Query: 2 DNPHVLVD 9
DNPH ++D
Sbjct: 69 DNPHRILD 76


>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977

Query: 2 DNPHVLVD 9
DNPH ++D
Sbjct: 69 DNPHRILD 76


>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975

Query: 2 DNPHVLVD 9
DNPH ++D
Sbjct: 69 DNPHRILD 76


>sp|NS2A_CVMA5|NON-STRUCTURAL protein 2a|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 DNPHVL 7
DNPH+L
Sbjct: 83 DNPHML 88


>sp|RDRP_TBRFV|REPLICASE large subunit|Tomato brown rugose fruit virus

Query: 2 DNPHVLV 8
D+PHVLV
Sbjct: 1066 DSPHVLV 1072


>sp|RDRP_TOML|REPLICASE large subunit|Tomato mosaic virus (strain L)

Query: 2 DNPHVLV 8
D+PHVLV
Sbjct: 1066 DSPHVLV 1072


>sp|RDRP_TOMK1|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 2 DNPHVLV 8
D+PHVLV
Sbjct: 1066 DSPHVLV 1072


>sp|RDRP_TOMK2|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 2 DNPHVLV 8
D+PHVLV
Sbjct: 1066 DSPHVLV 1072


>sp|RDRP_TOMS1|REPLICASE large subunit|Tomato mosaic virus (strain S-1)

Query: 2 DNPHVLV 8
D+PHVLV
Sbjct: 1066 DSPHVLV 1072


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 2 DNPHV 6
DNPHV
Sbjct: 3312 DNPHV 3316


>sp|RDRP_CGMVS|REPLICASE large subunit|Cucumber green mottle mosaic virus

Query: 2 DNPHVLV 8
D+PHVLV
Sbjct: 1094 DSPHVLV 1100


>sp|NS2A_CVBQ|NON-STRUCTURAL protein 2a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 2 DNPHVL 7
DNPH+L
Sbjct: 86 DNPHIL 91


>sp|CAPSD_CACV4|CAPSID protein VP1|Canine calicivirus (strain 48) (CaCV)

Query: 4 PHVLVD 9
PHVLVD
Sbjct: 287 PHVLVD 292


>sp|VP74_NPVCF|PROTEIN p74|Choristoneura fumiferana nuclear polyhedrosis virus

Query: 4 PHVLVD 9
PH+L+D
Sbjct: 33 PHILID 38


>sp|Y024_OSHVF|UNCHARACTERIZED protein ORF24|Ostreid herpesvirus 1 (isolate France)

Query: 2 DNPHVLVD 9
DNPHV D
Sbjct: 306 DNPHVYKD 313


>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8

Query: 1 SDNPHVLVDT 10
+D P LVDT
Sbjct: 88 ADEPWTLVDT 97


>sp|Y030_NPVOP|UNCHARACTERIZED 52.7 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 DNPHVLVD 9
DNPH + D
Sbjct: 436 DNPHYVQD 443


>sp|VP74_NPVOP|PROTEIN p74|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 4 PHVLVD 9
PH+L+D
Sbjct: 33 PHILID 38


>sp|ERBB_AVIEU|TYROSINE-PROTEIN kinase transforming protein erbB|Avian erythroblastosis virus

Query: 2 DNPHV 6
DNPHV
Sbjct: 190 DNPHV 194


>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 2 DNPHVL 7
DNPH+L
Sbjct: 76 DNPHLL 81


>sp|DNBI_SHV21|MAJOR DNA-binding protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 SDNPHVLVD 9
++ PHVL+D
Sbjct: 866 TEYPHVLLD 874


>sp|LTP_GAHVM|LARGE tegument protein deneddylase|Gallid herpesvirus 2 (strain

Query: 2 DNPHVLVD 9
DNP V++D
Sbjct: 56 DNPEVILD 63


>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate

Query: 4 PHVLVD 9
PHVL+D
Sbjct: 1805 PHVLID 1810


>sp|PG086_FOWPN|ENTRY-FUSION complex protein OPG086|Fowlpox virus (strain NVSL) (FPV)

Query: 1 SDNPHVLVDT 10
SDN H+ V +
Sbjct: 40 SDNEHIFVSS 49


>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1

Query: 4 PHVLVD 9
PHVL+D
Sbjct: 1805 PHVLID 1810


>sp|PIF0_NPVAC|PER os infectivity factor 0|Autographa californica nuclear

Query: 4 PHVLVD 9
PH+L+D
Sbjct: 33 PHILID 38


>sp|ERBB_AVIER|TYROSINE-PROTEIN kinase transforming protein erbB|Avian erythroblastosis virus

Query: 2 DNPHV 6
DNPHV
Sbjct: 190 DNPHV 194


>sp|ERBB_ALV|TYROSINE-PROTEIN kinase transforming protein erbB|Avian leukosis virus (ALV)

Query: 2 DNPHV 6
DNPHV
Sbjct: 190 DNPHV 194




127|Sequence|631|640|VLVDTLTSHS

>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)

Query: 4 DTLTSHS 10
DTL SHS
Sbjct: 309 DTLASHS 315


>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 LVDTLTSHS 10
L+DTL +HS
Sbjct: 100 LLDTLVNHS 108


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 2 LVDTLTSH 9
+DTLT H
Sbjct: 3556 FIDTLTKH 3563


>sp|VP1_AQRVG|OUTER capsid protein VP1|Aquareovirus G (isolate American grass

Query: 1 VLVDTLTSHS 10
+L+D LT+H+
Sbjct: 29 ILIDRLTNHT 38


>sp|YR188_MIMIV|UNCHARACTERIZED protein R188|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VLVDTLT 7
+LVDTLT
Sbjct: 281 ILVDTLT 287


>sp|GLYCO_SYNV|SPIKE glycoprotein|Sonchus yellow net virus (SYNV)

Query: 1 VLVDTLTSHS 10
++VDT T HS
Sbjct: 402 LVVDTATGHS 411




128|Sequence|636|645|LTSHSFTLSW

>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus

Query: 1 LTSHSFTLS 9
LT HSF+L+
Sbjct: 1742 LTGHSFSLA 1750


>sp|GB_HSVA1|ENVELOPE glycoprotein B|Herpesvirus ateles type 1 (strain

Query: 1 LTSHSFTLSW 10
LT+ +FT+ W
Sbjct: 365 LTTPTFTVGW 374


>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)

Query: 1 LTSHSFTLSW 10
LT+ FT++W
Sbjct: 340 LTTPKFTVAW 349


>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)

Query: 1 LTSHSFTLSW 10
LT+ FT++W
Sbjct: 340 LTTPKFTVAW 349


>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)

Query: 1 LTSHSFTLSW 10
LT+ FT++W
Sbjct: 345 LTTPKFTVAW 354


>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)

Query: 1 LTSHSFTLSW 10
LT+ FT++W
Sbjct: 344 LTTPKFTVAW 353


>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)

Query: 1 LTSHSFTLSW 10
LT+ FT++W
Sbjct: 345 LTTPKFTVAW 354


>sp|GB_ILTVT|ENVELOPE glycoprotein B|Infectious laryngotracheitis virus (strain Thorne

Query: 1 LTSHSFTLSW 10
LT FT+ W
Sbjct: 302 LTDEQFTIGW 311


>sp|GB_ILTV6|ENVELOPE glycoprotein B|Infectious laryngotracheitis virus (strain 632)

Query: 1 LTSHSFTLSW 10
LT FT+ W
Sbjct: 292 LTDEQFTIGW 301


>sp|GB_SHV1|ENVELOPE glycoprotein B|Saimiriine herpesvirus 1 (strain MV-5-4-PSL)

Query: 1 LTSHSFTLSW 10
LT+ FT+ W
Sbjct: 356 LTTPKFTIGW 365


>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)

Query: 1 LTSHSFTLSW 10
LT+ FT++W
Sbjct: 345 LTTPKFTVAW 354


>sp|GB_ILTVS|ENVELOPE glycoprotein B|Infectious laryngotracheitis virus (strain SA-2)

Query: 1 LTSHSFTLSW 10
LT FT+ W
Sbjct: 302 LTDEQFTIGW 311


>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2

Query: 1 LTSHSFTLSW 10
LT+ FT+ W
Sbjct: 326 LTTPKFTVGW 335


>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 1 LTSHSFTLSW 10
L+SHS L+W
Sbjct: 82 LSSHSVRLTW 91


>sp|HN_SENDO|HEMAGGLUTININ-NEURAMINIDASE virus (strain Ohita) (SeV)

Query: 3 SHSFTLSW 10
SH T+SW
Sbjct: 442 SHPLTISW 449


>sp|HN_SENDA|HEMAGGLUTININ-NEURAMINIDASE virus (strain Hamamatsu) (SeV)

Query: 3 SHSFTLSW 10
SH T+SW
Sbjct: 442 SHPLTISW 449




129|Sequence|641|650|FTLSWKDYST

>sp|VE6_HPV47|PROTEIN E6|Human papillomavirus 47

Query: 1 FTLSWKDYS 9
TL WKDYS
Sbjct: 60 LTLIWKDYS 68


>sp|ADPP_NPVAC|PROTEIN ADP-ribose pyrophosphatase ORF38|Autographa californica nuclear

Query: 1 FTLSWKD 7
FTL WKD
Sbjct: 83 FTLQWKD 89


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 FTLSWKDYS 9
T WKDYS
Sbjct: 718 LTTVWKDYS 726


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 1 FTLSWKDYS 9
T +WK+YS
Sbjct: 718 LTTTWKEYS 726


>sp|VE6_HPV36|PROTEIN E6|Human papillomavirus 36

Query: 1 FTLSWKDY 8
+L WKDY
Sbjct: 61 LSLIWKDY 68


>sp|VE6_HPV05|PROTEIN E6|Human papillomavirus 5

Query: 1 FTLSWKDY 8
+L WKDY
Sbjct: 61 LSLIWKDY 68


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 FTLSWKDYS 9
T +WK+YS
Sbjct: 715 LTTTWKEYS 723


>sp|NSP1_ROTME|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Mouse/Brazil/EHP/1981/G16P[20])

Query: 1 FTLSWKDYST 10
FTLS+K ++T
Sbjct: 431 FTLSYKQFTT 440


>sp|GP27_BPSP1|GENE 27 protein|Bacillus phage SP01 (Bacteriophage SP01)

Query: 3 LSWKDYST 10
+ WKDY++
Sbjct: 132 VEWKDYNS 139


>sp|DPOL_BPT4|DNA-DIRECTED DNA polymerase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 LSWKDYST 10
LSW D+ST
Sbjct: 859 LSWIDHST 866


>sp|VE6_HPV5B|PROTEIN E6|Human papillomavirus type 5b

Query: 1 FTLSWKDY 8
+L WKDY
Sbjct: 61 LSLIWKDY 68


>sp|VF232_IIV6|PUTATIVE ubiquitin thioesterase 232R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 TLSWKDY 8
T++W DY
Sbjct: 445 TINWNDY 451


>sp|Y007_SIFVH|PUTATIVE helicase 7|Sulfolobus islandicus filamentous virus (isolate

Query: 2 TLSWKDY 8
TLSW+ Y
Sbjct: 513 TLSWQTY 519


>sp|VE6_HPV20|PROTEIN E6|Human papillomavirus 20

Query: 1 FTLSWKDY 8
TL WKD+
Sbjct: 72 LTLIWKDH 79


>sp|BEL1_SFVCP|PROTEIN Bel-1|Simian foamy virus (isolate chimpanzee)

Query: 1 FTLSWKDYST 10
FT+SW+ T
Sbjct: 115 FTVSWEQSET 124


>sp|YL122_MIMIV|PUTATIVE ankyrin repeat protein L122|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FTLSWKDYST 10
+L WK YS+
Sbjct: 581 LSLKWKAYSS 590


>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 FTLSWK 6
+TLSWK
Sbjct: 282 YTLSWK 287


>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 FTLSWK 6
+TLSWK
Sbjct: 282 YTLSWK 287


>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 FTLSWK 6
+TLSWK
Sbjct: 282 YTLSWK 287


>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1 FTLSWKDYST 10
FT+SW+ T
Sbjct: 115 FTVSWEQSDT 124


>sp|ENV_FENV1|ENVELOPE glycoprotein|Feline endogenous virus ECE1

Query: 1 FTLSWKDYS 9
+TL+W+ YS
Sbjct: 34 YTLTWQIYS 42




130|Sequence|646|655|KDYSTESQPG

>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 KDYSTESQPG 10
K YST+ +PG
Sbjct: 92 KRYSTQVEPG 101


>sp|VG69_BPMD2|GENE 69 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 KDYSTESQPG 10
+DY T +QPG
Sbjct: 170 RDYKTGNQPG 179


>sp|VG59_ALHV1|DNA polymerase processivity factor|Alcelaphine herpesvirus 1 (strain

Query: 1 KDYSTESQP 9
+D STE+QP
Sbjct: 356 QDCSTETQP 364


>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 KDYSTESQPG 10
K YST+ PG
Sbjct: 92 KKYSTQVDPG 101


>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 KDYSTESQPG 10
K YST+ PG
Sbjct: 92 KRYSTQVDPG 101


>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)

Query: 2 DYSTESQPG 10
D STE++PG
Sbjct: 44 DASTETRPG 52


>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 KDYSTESQPG 10
K YST+ PG
Sbjct: 92 KRYSTQVDPG 101




131|Sequence|651|660|ESQPGFIQGY

>sp|SPIKE_BC133|SPIKE glycoprotein|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 SQPGFIQGY 10
+ PG++QGY
Sbjct: 898 ADPGYMQGY 906


>sp|SPIKE_BCHK4|SPIKE glycoprotein|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 SQPGFIQGY 10
+ PG++QGY
Sbjct: 900 ADPGYMQGY 908


>sp|SPIKE_BCHK5|SPIKE glycoprotein|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 SQPGFIQGY 10
+ PG++QGY
Sbjct: 898 ADPGYMQGY 906


>sp|SPIKE_BCHK9|SPIKE glycoprotein|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 2 SQPGFIQGY 10
+ PGF+Q Y
Sbjct: 823 TDPGFMQSY 831


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 2 SQPGFIQGY 10
+ PG++QGY
Sbjct: 901 ADPGYMQGY 909


>sp|LTP_EHV1B|LARGE tegument protein deneddylase|Equine herpesvirus 1 (strain Ab4p)

Query: 1 ESQPGFI 7
ES+PGF+
Sbjct: 222 ESEPGFL 228


>sp|VP7_RRSVT|MICROTUBULE-ASSOCIATED protein VP7|Rice ragged stunt virus (isolate

Query: 1 ESQPGFIQG 9
+S+PG I+G
Sbjct: 144 QSRPGMIEG 152


>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 3 QPGFIQGY 10
QPGF GY
Sbjct: 1621 QPGFWGGY 1628


>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)

Query: 1 ESQPGFIQGY 10
+ +PG + GY
Sbjct: 238 DDEPGVLHGY 247


>sp|POLG_SVV1|GENOME polyprotein|Seneca Valley virus (isolate -/United

Query: 1 ESQPGFIQG 9
+S PGF+ G
Sbjct: 1920 QSHPGFLLG 1928




132|Sequence|656|665|FIQGYHVYLK

>sp|PG155_CAMPS|ENVELOPE protein OPG155|Camelpox virus (strain CMS)

Query: 1 FIQGYHVY 8
FIQGY +Y
Sbjct: 20 FIQGYSIY 27


>sp|PG155_CAMPM|ENVELOPE protein OPG155|Camelpox virus (strain M-96)

Query: 1 FIQGYHVY 8
FIQGY +Y
Sbjct: 20 FIQGYSIY 27


>sp|PG155_VARV|ENVELOPE protein OPG155|Variola virus

Query: 1 FIQGYHVY 8
FIQGY +Y
Sbjct: 20 FIQGYSIY 27


>sp|PG155_VAR67|ENVELOPE protein OPG155|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 FIQGYHVY 8
FIQGY +Y
Sbjct: 20 FIQGYSIY 27


>sp|PG155_CWPXB|ENVELOPE protein OPG155|Cowpox virus (strain Brighton Red)

Query: 1 FIQGYHVY 8
FIQGY +Y
Sbjct: 20 FIQGYSIY 27


>sp|PG155_CWPXG|ENVELOPE protein OPG155|Cowpox virus (strain GRI-90 /

Query: 1 FIQGYHVY 8
FIQGY +Y
Sbjct: 20 FIQGYSIY 27


>sp|PG155_VACCW|ENVELOPE protein OPG155|Vaccinia virus (strain Western Reserve)

Query: 1 FIQGYHVY 8
FIQGY +Y
Sbjct: 20 FIQGYSIY 27


>sp|PG155_VACCC|ENVELOPE protein OPG155|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 FIQGYHVY 8
FIQGY +Y
Sbjct: 20 FIQGYSIY 27


>sp|PG155_VACCA|ENVELOPE protein OPG155|Vaccinia virus (strain Ankara) (VACV)

Query: 1 FIQGYHVY 8
FIQGY +Y
Sbjct: 20 FIQGYSIY 27


>sp|PG155_ECTVM|ENVELOPE protein OPG155|Ectromelia virus (strain Moscow) (ECTV)

Query: 1 FIQGYHVY 8
FIQGY +Y
Sbjct: 20 FIQGYSIY 27


>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38

Query: 2 IQGYHV 7
IQGYHV
Sbjct: 474 IQGYHV 479


>sp|Y054_SIFVH|UNCHARACTERIZED protein 54|Sulfolobus islandicus filamentous virus (isolate

Query: 4 GYHVYL 9
GYHVYL
Sbjct: 41 GYHVYL 46


>sp|Y749_MIMIV|PUTATIVE homeobox protein R749|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FIQGYHVYLK 10
FIQ YH+ K
Sbjct: 101 FIQMYHIAQK 110


>sp|VP2_BRD|STRUCTURAL core protein VP2|Broadhaven virus (BRD)

Query: 1 FIQGYHV 7
+IQ YHV
Sbjct: 268 YIQSYHV 274


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 2 IQGYHVYL 9
++GYHV L
Sbjct: 1168 VRGYHVLL 1175


>sp|ICP4_EHV1V|MAJOR viral transcription factor ICP4|Equine herpesvirus 1 (strain V592)

Query: 2 IQGYHVYLK 10
I YH+Y++
Sbjct: 1211 ISQYHIYMR 1219


>sp|ICP4_EHV1K|MAJOR viral transcription factor|Equine herpesvirus 1 (strain Kentucky

Query: 2 IQGYHVYLK 10
I YH+Y++
Sbjct: 1211 ISQYHIYMR 1219


>sp|ICP4_EHV1B|MAJOR viral transcription factor|Equine herpesvirus 1 (strain Ab4p)

Query: 2 IQGYHVYLK 10
I YH+Y++
Sbjct: 1211 ISQYHIYMR 1219


>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)

Query: 1 FIQGYHVYL 9
F +GYH+++
Sbjct: 76 FEEGYHIHV 84


>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)

Query: 1 FIQGYHVYL 9
F +GYH+++
Sbjct: 76 FEEGYHIHV 84


>sp|YR253_MIMIV|UNCHARACTERIZED protein R253|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 IQGYHVYLK 10
+Q YH +LK
Sbjct: 180 LQNYHEFLK 188


>sp|RPO1_MIMIV|DNA-DIRECTED RNA polymerase subunit 1|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FIQGYHVYLK 10
F GY +YLK
Sbjct: 99 FHMGYLIYLK 108


>sp|POL_IPHA|INTRACISTERNAL A-particle Pol-related polyprotein|Hamster intracisternal

Query: 4 GYHVYL 9
G+HVYL
Sbjct: 840 GHHVYL 845


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 2 IQGYHVYL 9
I GYHV L
Sbjct: 1166 IPGYHVLL 1173




133|Sequence|661|670|HVYLKSKARQ

>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)

Query: 2 VYLKSKARQ 10
+YLKSK++Q
Sbjct: 401 IYLKSKSQQ 409


>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)

Query: 2 VYLKSKARQ 10
+YLKSK++Q
Sbjct: 425 IYLKSKSQQ 433


>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 VYLKSKARQ 10
+YLKSK++Q
Sbjct: 425 IYLKSKSQQ 433


>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 1 HVYLKS 6
H+YLKS
Sbjct: 542 HIYLKS 547


>sp|3BHS_VACCW|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia

Query: 1 HVYLKSK 7
HVY KSK
Sbjct: 145 HVYAKSK 151


>sp|3BHS_MONPV|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Monkeypox

Query: 1 HVYLKSK 7
HVY KSK
Sbjct: 145 HVYAKSK 151


>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia

Query: 1 HVYLKSK 7
HVY KSK
Sbjct: 145 HVYAKSK 151


>sp|3BHS_VACCC|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia

Query: 1 HVYLKSK 7
HVY KSK
Sbjct: 145 HVYAKSK 151




134|Sequence|666|675|SKARQCHPRF

>sp|UL01_HCMVM|GLYCOPROTEIN UL1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 SKARQCHPRF 10
S+ + CHPRF
Sbjct: 94 SENKSCHPRF 103


>sp|NEF_HV1EL|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 2 KARQCHPRF 10
KAR+ HP F
Sbjct: 195 KAREMHPEF 203


>sp|NEF_HV1ND|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 2 KARQCHPRF 10
KAR+ HP F
Sbjct: 195 KARELHPEF 203


>sp|YL065_MIMIV|UNCHARACTERIZED protein L65|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 KARQCHP 8
K+ QCHP
Sbjct: 253 KSTQCHP 259


>sp|RPC2_BPP22|REPRESSOR protein C2|Salmonella phage P22 (Bacteriophage P22)

Query: 1 SKARQCHPRF 10
SKA QC P +
Sbjct: 54 SKALQCSPDY 63


>sp|NEF_HV1Z6|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 2 KARQCHPRF 10
KAR+ HP F
Sbjct: 200 KAREMHPEF 208


>sp|3609L_ASFWA|PROTEIN MGF 360-9L|African swine fever virus (isolate

Query: 2 KARQCHPRF 10
+ +CHP F
Sbjct: 17 RPTKCHPHF 25


>sp|3609L_ASFP4|PROTEIN MGF 360-9L|African swine fever virus (isolate

Query: 2 KARQCHPRF 10
+ +CHP F
Sbjct: 17 RPTKCHPHF 25


>sp|POL1_BPMV|RNA1 polyprotein|Bean-pod mottle virus (strain Kentucky

Query: 1 SKARQCHPRF 10
++ +QC+PR
Sbjct: 41 ARLKQCNPRL 50


>sp|NEF_SIVEK|PROTEIN Nef|Simian immunodeficiency virus (isolate EK505)

Query: 2 KARQCHPRF 10
+AR+ HP F
Sbjct: 194 RARELHPEF 202


>sp|MATRX_LPMV|MATRIX protein|La Piedad-Michoacan-Mexico virus (LPMV)

Query: 1 SKARQCHP 8
S+ R CHP
Sbjct: 298 SRGRSCHP 305


>sp|MATRX_ARAV|MATRIX protein|Aravan virus (ARAV)

Query: 3 ARQCH 7
ARQCH
Sbjct: 159 ARQCH 163


>sp|MATRX_KHUV|MATRIX protein|Khujand virus (KHUV)

Query: 3 ARQCH 7
ARQCH
Sbjct: 159 ARQCH 163


>sp|MATRX_EBLV1|MATRIX protein|European bat lyssavirus 1 (strain

Query: 3 ARQCH 7
ARQCH
Sbjct: 159 ARQCH 163


>sp|MATRX_MOKV|MATRIX protein|Mokola virus (MOKV)

Query: 3 ARQCH 7
ARQCH
Sbjct: 159 ARQCH 163


>sp|MATRX_ABLVB|MATRIX protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 3 ARQCH 7
ARQCH
Sbjct: 169 ARQCH 173


>sp|MATRX_IRKV|MATRIX protein|Irkut virus (IRKV)

Query: 3 ARQCH 7
ARQCH
Sbjct: 159 ARQCH 163


>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)

Query: 3 ARQCH 7
ARQCH
Sbjct: 159 ARQCH 163


>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 3 ARQCH 7
ARQCH
Sbjct: 159 ARQCH 163


>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)

Query: 3 ARQCH 7
ARQCH
Sbjct: 159 ARQCH 163


>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)

Query: 3 ARQCH 7
ARQCH
Sbjct: 159 ARQCH 163


>sp|MATRX_EBLV2|MATRIX protein|European bat lyssavirus 2 (strain

Query: 3 ARQCH 7
ARQCH
Sbjct: 159 ARQCH 163


>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)

Query: 3 ARQCH 7
ARQCH
Sbjct: 159 ARQCH 163


>sp|UL79_HCMVM|PROTEIN UL79|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 RQCHPRF 10
R CHPR
Sbjct: 125 RLCHPRL 131


>sp|MATRX_RABVD|MATRIX protein|Rabies virus (strain China/DRV) (RABV)

Query: 3 ARQCH 7
ARQCH
Sbjct: 159 ARQCH 163


>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 RQCHPRF 10
R CHPR
Sbjct: 125 RLCHPRL 131


>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 3 ARQCH 7
ARQCH
Sbjct: 159 ARQCH 163


>sp|NEF_HV1S9|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 ARQCHPRF 10
AR+ HP F
Sbjct: 193 ARELHPEF 200


>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 3 ARQCH 7
ARQCH
Sbjct: 159 ARQCH 163


>sp|NEF_HV1YF|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 ARQCHPRF 10
AR+ HP F
Sbjct: 201 ARELHPEF 208




135|Sequence|671|680|CHPRFEKAVL

>sp|SPIKE_BCHK9|SPIKE glycoprotein|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 2 HPRFEKAVL 10
HP FE+A+L
Sbjct: 591 HPNFERALL 599


>sp|1A_AMV|REPLICATION protein 1a|Alfalfa mosaic virus (AMV)

Query: 1 CHPRFEKAVL 10
CH + EKAVL
Sbjct: 1019 CHTQAEKAVL 1028


>sp|POLG_TMEVG|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 2 HPRFEKAVL 10
P+FE AVL
Sbjct: 1872 QPKFEPAVL 1880


>sp|POLG_TMEVD|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 2 HPRFEKAVL 10
P+FE AVL
Sbjct: 1870 QPKFEPAVL 1878


>sp|POLG_TMEVB|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 2 HPRFEKAVL 10
P+FE AVL
Sbjct: 1872 QPKFEPAVL 1880


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 2 HPRFEKAVL 10
P+FE AVL
Sbjct: 1864 QPKFEPAVL 1872


>sp|PLP_BPSAV|O-SERYL-DTMP PLP-dependent decarboxylase|Salmonella phage ViI

Query: 2 HPRFEKAVL 10
HPR+E V+
Sbjct: 366 HPRYEGKVM 374


>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 CHPRFE 6
C PRFE
Sbjct: 400 CRPRFE 405


>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 CHPRFE 6
C PRFE
Sbjct: 400 CRPRFE 405


>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 CHPRFE 6
C PRFE
Sbjct: 400 CRPRFE 405




136|Sequence|676|685|EKAVLSDGSE

>sp|GN_MUHVS|ENVELOPE glycoprotein N|Murid herpesvirus 1 (strain Smith)

Query: 2 KAVLSDGSE 10
K V+SDGSE
Sbjct: 71 KIVISDGSE 79


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 EKAVLSDG 8
E+AVL DG
Sbjct: 1489 ERAVLDDG 1496


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 EKAVLSDG 8
E+AVL DG
Sbjct: 1488 ERAVLDDG 1495


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 EKAVLSDG 8
E+AVL DG
Sbjct: 1489 ERAVLDDG 1496




137|Sequence|681|690|SDGSECCKYK

>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus

Query: 6 CCKYK 10
CCKYK
Sbjct: 1652 CCKYK 1656


>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)

Query: 1 SDGSEC 6
SDGSEC
Sbjct: 117 SDGSEC 122


>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain

Query: 1 SDGSEC 6
SDGSEC
Sbjct: 117 SDGSEC 122


>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)

Query: 1 SDGSEC 6
SDGSEC
Sbjct: 117 SDGSEC 122


>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1 SDGSEC 6
SDGSEC
Sbjct: 117 SDGSEC 122


>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1 SDGSEC 6
SDGSEC
Sbjct: 117 SDGSEC 122


>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)

Query: 1 SDGSEC 6
SDGSEC
Sbjct: 117 SDGSEC 122


>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1 SDGSEC 6
SDGSEC
Sbjct: 117 SDGSEC 122


>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1 SDGSEC 6
SDGSEC
Sbjct: 117 SDGSEC 122


>sp|V022_FOWPN|PUTATIVE ankyrin repeat protein FPV022|Fowlpox virus (strain NVSL) (FPV)

Query: 4 SECCKYK 10
+ CCKYK
Sbjct: 395 AACCKYK 401


>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)

Query: 2 DGSECCKY 9
DG+E C Y
Sbjct: 2867 DGAEACVY 2874


>sp|NSP4_WTV|NON-STRUCTURAL protein 4|Wound tumor virus (WTV)

Query: 2 DGSECCK 8
DG CC+
Sbjct: 314 DGCSCCR 320


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 2 DGSECC 7
DG+ CC
Sbjct: 2012 DGASCC 2017


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 DGSECC 7
DG+ CC
Sbjct: 2039 DGASCC 2044


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 DGSECC 7
DG+ CC
Sbjct: 2019 DGASCC 2024


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 DGSECC 7
DG+ CC
Sbjct: 2016 DGASCC 2021


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 1 SDGSECC 7
S+GS+CC
Sbjct: 5 SEGSQCC 11


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 DGSECC 7
DG+ CC
Sbjct: 2038 DGASCC 2043


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 DGSECC 7
DG+ CC
Sbjct: 2030 DGASCC 2035


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 DGSECC 7
DG+ CC
Sbjct: 2038 DGASCC 2043


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 DGSECC 7
DG+ CC
Sbjct: 2044 DGASCC 2049


>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)

Query: 2 DGSECC 7
DG+ CC
Sbjct: 2042 DGASCC 2047


>sp|CEP3_MUHVK|CYTOPLASMIC envelopment protein 3|Murid herpesvirus 1 (strain K181)

Query: 3 GSECCK 8
G+ECCK
Sbjct: 2 GAECCK 7




138|Sequence|686|695|CCKYKIDNPE

>sp|DEPOL_BPKB1|DEPOLYMERASE, capsule K2-specific|Klebsiella phage B1 (Bacteriophage B1)

Query: 1 CCKYKIDNP 9
C +KID+P
Sbjct: 583 CLGFKIDSP 591


>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 CCKYKIDNPE 10
C ++DNP+
Sbjct: 403 CINARVDNPQ 412


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 2 CKYKIDNPE 10
CK+ +D P+
Sbjct: 4054 CKFMVDTPK 4062


>sp|POLN_AHEV|NON-STRUCTURAL polyprotein pORF1|Avian hepatitis E virus (isolate

Query: 1 CCKYKIDNP 9
C K+ +D+P
Sbjct: 1225 CAKFTLDDP 1233


>sp|L_PARVP|RNA-DIRECTED RNA polymerase L|Parana mammarenavirus (isolate

Query: 4 YKIDNP 9
YK+DNP
Sbjct: 1692 YKLDNP 1697


>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)

Query: 1 CCKYKIDNPE 10
CK+ IDN E
Sbjct: 220 LCKHDIDNAE 229


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 2 CKYKIDNPE 10
CK+ +D P+
Sbjct: 4054 CKFMVDTPK 4062


>sp|LEF1_NPVOP|LATE expression factor 1|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 CCKYKIDNPE 10
C K+K+D P+
Sbjct: 127 CGKFKMDAPK 136


>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus

Query: 1 CCKYKIDNPE 10
CK+ IDN E
Sbjct: 217 LCKHDIDNVE 226


>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 CCKYKIDNPE 10
CK+ IDN E
Sbjct: 217 LCKHDIDNVE 226


>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus

Query: 2 CKYKID 7
CKYK D
Sbjct: 1684 CKYKCD 1689


>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)

Query: 1 CCKYKIDNPE 10
C KY DNP+
Sbjct: 1421 CNKYAKDNPK 1430


>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 CCKYKIDNPE 10
C KY DNP+
Sbjct: 1407 CNKYAKDNPK 1416


>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4

Query: 1 CCKYKIDN 8
CC YK N
Sbjct: 517 CCAYKAVN 524


>sp|L_SBVBH|RNA-DIRECTED RNA polymerase L|Bovine Schmallenberg virus (isolate

Query: 3 KYKIDNPE 10
KY I NPE
Sbjct: 866 KYTIANPE 873




139|Sequence|691|700|IDNPEEKALI

>sp|REP_BPHC1|REPLICATION protein|Haemophilus phage HP1 (strain HP1c1)

Query: 1 IDNPEEK 7
IDNPEE+
Sbjct: 349 IDNPEEQ 355


>sp|POL1_BPMV|RNA1 polyprotein|Bean-pod mottle virus (strain Kentucky

Query: 1 IDNPEEKALI 10
ID+PE +AL+
Sbjct: 733 IDDPEAQALL 742


>sp|Y065_AFV1Y|UNCHARACTERIZED protein ORF65|Acidianus filamentous virus 1 (isolate

Query: 3 NPEEKALI 10
N EEKALI
Sbjct: 48 NEEEKALI 55


>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 1 IDNPEE 6
IDNPEE
Sbjct: 54 IDNPEE 59


>sp|YL323_MIMIV|UNCHARACTERIZED protein L323|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 IDNPEEKALI 10
I+NPE AL+
Sbjct: 215 IENPETAALL 224


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 1 IDNPEEKA 8
+DN EEKA
Sbjct: 504 LDNEEEKA 511


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 1 IDNPEEKA 8
+DN EEKA
Sbjct: 503 LDNEEEKA 510


>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 3 NPEEKALI 10
+PE+KAL+
Sbjct: 1741 SPEDKALV 1748


>sp|POLB_CHPVE|ORFB polyprotein|Cryphonectria hypovirus 1 (strain EP713)

Query: 3 NPEEKALI 10
+PE+KAL+
Sbjct: 1742 SPEDKALV 1749


>sp|DNLI_BPT7|DNA ligase|Escherichia phage T7 (Bacteriophage T7)

Query: 2 DNPEEK 7
DNP+EK
Sbjct: 353 DNPQEK 358


>sp|DNLI_BPT3|DNA ligase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 2 DNPEEK 7
DNP+EK
Sbjct: 340 DNPQEK 345




140|Sequence|696|705|EKALIVDNLK

>sp|ETFS_ASFK5|EARLY transcription factor large subunit|African swine fever virus

Query: 2 KALIVDNL 9
+ALI+DNL
Sbjct: 934 EALIIDNL 941


>sp|VF113_ASFP4|EARLY transcription factor large subunit|African swine fever virus

Query: 2 KALIVDNL 9
+ALI+DNL
Sbjct: 933 EALIIDNL 940


>sp|ETFS_ASFWA|EARLY transcription factor large subunit|African swine fever virus

Query: 2 KALIVDNL 9
+ALI+DNL
Sbjct: 933 EALIIDNL 940


>sp|ETFS_ASFB7|EARLY transcription factor large subunit|African swine fever virus

Query: 2 KALIVDNL 9
+ALI+DNL
Sbjct: 933 EALIIDNL 940


>sp|ETFS_ASFM2|EARLY transcription factor large subunit|African swine fever virus

Query: 2 KALIVDNL 9
+ALI+DNL
Sbjct: 898 EALIIDNL 905




141|Sequence|701|710|VDNLKPESFY

>sp|MCP_PSHV1|MAJOR capsid protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 VDNLKPESF 9
V+NL P+SF
Sbjct: 886 VNNLAPDSF 894


>sp|S1_FOAMV|PUTATIVE uncharacterized protein S1|Human spumaretrovirus (SFVcpz(hu))

Query: 1 VDNLKPES 8
+DNLKP S
Sbjct: 81 IDNLKPTS 88


>sp|NCAP_PTPV|NUCLEOPROTEIN toro phlebovirus

Query: 2 DNLKPES 8
DNLKP S
Sbjct: 225 DNLKPSS 231


>sp|POL_SFVCP|PRO-POL polyprotein|Simian foamy virus (isolate chimpanzee)

Query: 1 VDNLKPES 8
+DNLKP S
Sbjct: 1117 IDNLKPTS 1124


>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1 VDNLKPES 8
+DNLKP S
Sbjct: 1117 IDNLKPTS 1124


>sp|POL2_TORVR|RNA2 polyprotein|Tomato ringspot virus (isolate raspberry)

Query: 2 DNLKPESFY 10
D+L+ ESFY
Sbjct: 734 DDLECESFY 742


>sp|FIBC_BPT5|STRAIGHT fiber protein pb4|Escherichia phage T5 (Enterobacteria phage

Query: 1 VDNLKPESFY 10
++NLKP + Y
Sbjct: 62 INNLKPTTTY 71




142|Sequence|706|715|PESFYEFFIT

>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1 PESFYEFFIT 10
P S +EFFIT
Sbjct: 2163 PASLHEFFIT 2172


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1 PESFYEFFIT 10
P S +EFF+T
Sbjct: 2163 PASLHEFFLT 2172


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1 PESFYEFFIT 10
P S +EFF+T
Sbjct: 2163 PASLHEFFLT 2172


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1 PESFYEFFIT 10
P S +EFF+T
Sbjct: 2163 PASLHEFFLT 2172


>sp|PHOSP_PIV5|PHOSPHOPROTEIN virus 5 (strain W3)

Query: 1 PESFYEFFIT 10
PESF + F+T
Sbjct: 302 PESFNDSFLT 311


>sp|TERM_BPPH2|PRIMER terminal protein|Bacillus phage phi29 (Bacteriophage phi-29)

Query: 1 PESFYEFFI 9
P+ FYE F+
Sbjct: 212 PDDFYELFL 220


>sp|TERM_BPPZA|DNA terminal protein|Bacillus phage PZA (Bacteriophage PZA)

Query: 1 PESFYEFFI 9
P+ FYE F+
Sbjct: 212 PDDFYELFL 220


>sp|DNBI_BHV2B|MAJOR DNA-binding protein|Bovine herpesvirus 2 (strain BMV)

Query: 3 SFYEFFI 9
SFY FF+
Sbjct: 399 SFYRFFL 405


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 3 SFYEFFI 9
SFY FF+
Sbjct: 403 SFYRFFL 409


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 3 SFYEFFI 9
SFY FF+
Sbjct: 403 SFYRFFL 409


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 3 SFYEFFI 9
SFY FF+
Sbjct: 403 SFYRFFL 409


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 3 SFYEFFI 9
SFY FF+
Sbjct: 403 SFYRFFL 409


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 3 SFYEFFI 9
SFY FF+
Sbjct: 403 SFYRFFL 409


>sp|RDRP_RBDVR|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Raspberry bushy dwarf virus (isolate

Query: 2 ESFYEFFI 9
E F++FFI
Sbjct: 1310 ERFFDFFI 1317


>sp|3604L_ASFL5|PROTEIN MGF 360-4L|African swine fever virus (isolate

Query: 2 ESFYEFF 8
ESFY FF
Sbjct: 365 ESFYPFF 371


>sp|TERL_BPG20|TERMINASE, large subunit|Thermus phage G20c (Thermus thermophilus

Query: 4 FYEFFI 9
FYEFF+
Sbjct: 186 FYEFFL 191


>sp|TERL_BP234|TERMINASE, large subunit|Thermus virus P23-45 (Thermus thermophilus

Query: 4 FYEFFI 9
FYEFF+
Sbjct: 186 FYEFFL 191


>sp|PG085_FOWPN|PROBABLE metalloendopeptidase G1-type|Fowlpox virus (strain NVSL) (FPV)

Query: 1 PESFYEFFI 9
PE Y FF+
Sbjct: 582 PEKVYNFFV 590


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 4 FYEFFIT 10
F+EF+IT
Sbjct: 676 FHEFYIT 682


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 4 FYEFFIT 10
F+EF+IT
Sbjct: 676 FHEFYIT 682


>sp|YL077_MIMIV|UNCHARACTERIZED protein L77|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PESFYEFFI 9
P+SF+E F+
Sbjct: 71 PDSFFEDFV 79




143|Sequence|711|720|EFFITPFTSA

>sp|YR407_MIMIV|PUTATIVE RNA methyltransferase R407|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 FFITPFT 8
F+ITPFT
Sbjct: 175 FWITPFT 181


>sp|MCP_PSHV1|MAJOR capsid protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 EFFITPFTS 9
EF ITP T+
Sbjct: 1213 EFLITPVTA 1221




144|Sequence|716|725|PFTSAGEGPS

>sp|RDRP_MPRVN|RNA-DIRECTED RNA polymerase VP2|Micromonas pusilla reovirus (isolate

Query: 1 PFTSAGEGP 9
PFT A GP
Sbjct: 341 PFTEADSGP 349


>sp|DNBI_ALHV1|MAJOR DNA-binding protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 PFTSAGEGPS 10
PFT GEG +
Sbjct: 127 PFTPLGEGST 136


>sp|CAPSD_LRVLG|MAJOR capsid protein|Leishmania RNA virus 1 -

Query: 1 PFTSAGEGP 9
P +SAG GP
Sbjct: 437 PISSAGYGP 445


>sp|SHDAG_HDVD3|SMALL delta antigen|Hepatitis delta virus genotype I

Query: 1 PFTSAGEG 8
PFT GEG
Sbjct: 178 PFTRTGEG 185


>sp|SHDAG_HDVM2|SMALL delta antigen|Hepatitis delta virus genotype I

Query: 1 PFTSAGEG 8
PFT GEG
Sbjct: 178 PFTRTGEG 185


>sp|LHDAG_HDVD3|LARGE delta antigen|Hepatitis delta virus genotype I

Query: 1 PFTSAGEG 8
PFT GEG
Sbjct: 178 PFTRTGEG 185


>sp|LHDAG_HDVM2|LARGE delta antigen|Hepatitis delta virus genotype I

Query: 1 PFTSAGEG 8
PFT GEG
Sbjct: 178 PFTRTGEG 185


>sp|LHDAG_HDVM1|LARGE delta antigen|Hepatitis delta virus genotype I

Query: 1 PFTSAGEG 8
PFT GEG
Sbjct: 178 PFTRTGEG 185


>sp|LHDAG_HDVNA|LARGE delta antigen|Hepatitis delta virus genotype I

Query: 1 PFTSAGEG 8
PFT GEG
Sbjct: 178 PFTRTGEG 185


>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)

Query: 1 PFTSAGEG 8
PFT GEG
Sbjct: 436 PFTDRGEG 443


>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain

Query: 1 PFTSAGEG 8
PFT GEG
Sbjct: 436 PFTDRGEG 443


>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus

Query: 1 PFTSAGEG 8
PFT GEG
Sbjct: 436 PFTDRGEG 443


>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate

Query: 1 PFTSAGEG 8
PFT GEG
Sbjct: 436 PFTDRGEG 443


>sp|VP35_BPAPS|PUTATIVE DNA transfer protein p35|Acyrthosiphon pisum secondary

Query: 1 PFTSAGEG 8
PFT AG G
Sbjct: 81 PFTEAGRG 88


>sp|ERBB_AVIEU|TYROSINE-PROTEIN kinase transforming protein erbB|Avian erythroblastosis virus

Query: 1 PFTSAGEGPS 10
P T +GE P+
Sbjct: 111 PLTPSGEAPN 120


>sp|088R_FRG3G|PUTATIVE FAD-linked sulfhydryl oxidase 088R|Frog virus 3 (isolate Goorha)

Query: 1 PFTSAGEGPS 10
PF +G GPS
Sbjct: 25 PFGPSGFGPS 34


>sp|ERBB_AVIER|TYROSINE-PROTEIN kinase transforming protein erbB|Avian erythroblastosis virus

Query: 1 PFTSAGEGPS 10
P T +GE P+
Sbjct: 111 PLTPSGEAPN 120


>sp|SHDAG_HDVTW|SMALL delta antigen|Hepatitis delta virus genotype II

Query: 1 PFTSAGEG 8
PFT GEG
Sbjct: 178 PFTRTGEG 185


>sp|ERBB_ALV|TYROSINE-PROTEIN kinase transforming protein erbB|Avian leukosis virus (ALV)

Query: 1 PFTSAGEGPS 10
P T +GE P+
Sbjct: 111 PLTPSGEAPN 120




145|Sequence|721|730|GEGPSATFTK

>sp|POL2_CRLVP|RNA2 polyprotein|Cherry rasp leaf virus (isolate

Query: 1 GEGPSATFTK 10
G+GPS FTK
Sbjct: 373 GQGPSIDFTK 382


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 2 EGPSATFTK 10
E PS +FTK
Sbjct: 2039 EHPSVSFTK 2047


>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United

Query: 4 PSATFT 9
PSATFT
Sbjct: 698 PSATFT 703


>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)

Query: 4 PSATFT 9
PSATFT
Sbjct: 697 PSATFT 702


>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)

Query: 1 GEGPSATFT 9
G+GP TFT
Sbjct: 307 GQGPPRTFT 315


>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)

Query: 1 GEGPSATFT 9
G+GP TFT
Sbjct: 306 GQGPPRTFT 314


>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)

Query: 1 GEGPSATFT 9
G+GP TFT
Sbjct: 307 GQGPPRTFT 315


>sp|TSP_BPTWO|TAIL sheath protein|Staphylococcus phage Twort (strain DSM

Query: 1 GEGPSATFT 9
GEG ATF+
Sbjct: 160 GEGEKATFS 168




146|Sequence|726|735|ATFTKVTTPD

>sp|YL451_MIMIV|UNCHARACTERIZED protein L451|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 FTKVTTPD 10
FTK++ PD
Sbjct: 99 FTKISKPD 106


>sp|MCE_WTV|PUTATIVE mRNA-capping enzyme P5|Wound tumor virus (WTV)

Query: 3 FTKVTTPD 10
FT+++TPD
Sbjct: 227 FTEMSTPD 234


>sp|POLG_PRSVH|GENOME polyprotein|Papaya ringspot virus (strain P

Query: 2 TFTKVTTPD 10
T+T + TPD
Sbjct: 2809 TYTPILTPD 2817


>sp|2B_TRVTC|PROTEIN 2b|Tobacco rattle virus (strain TCM)

Query: 2 TFTKVTT 8
TF+KVTT
Sbjct: 107 TFSKVTT 113


>sp|ST_BFPYV|SMALL t antigen|Budgerigar fledgling disease virus (BFPyV)

Query: 1 ATFTKVTTPD 10
ATF V+ PD
Sbjct: 79 ATFENVSVPD 88


>sp|POLG_PRSVP|GENOME polyprotein|Papaya ringspot virus (strain P

Query: 2 TFTKVTTPD 10
T+T + TPD
Sbjct: 140 TYTPILTPD 148


>sp|LT_BFPYV|LARGE T antigen|Budgerigar fledgling disease virus (BFPyV)

Query: 1 ATFTKVTTPD 10
ATF V+ PD
Sbjct: 79 ATFENVSVPD 88


>sp|POLG_PRSVW|GENOME polyprotein|Papaya ringspot virus (strain W)

Query: 2 TFTKVTTPD 10
T+T + TPD
Sbjct: 140 TYTPILTPD 148


>sp|E320_ADE1P|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11

Query: 2 TFTKVTTPD 10
TFT TTPD
Sbjct: 124 TFTSPTTPD 132


>sp|E320_ADE1A|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11

Query: 2 TFTKVTTPD 10
TFT TTPD
Sbjct: 124 TFTSSTTPD 132


>sp|E320_ADE35|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 35

Query: 2 TFTKVTTPD 10
TFT TTPD
Sbjct: 124 TFTSPTTPD 132




147|Sequence|731|740|VTTPDEHSSM

>sp|MYBE_AVILE|P135GAG-MYB-ETS-TRANSFORMING protein|Avian leukemia virus E26

Query: 3 TPDEHSS 9
TP+EHSS
Sbjct: 650 TPEEHSS 656


>sp|YO12_ADEG1|UNCHARACTERIZED protein ORF12|Fowl adenovirus A serotype 1

Query: 2 TTPDEH 7
T PDEH
Sbjct: 138 TAPDEH 143


>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 2 TTPDEHS 8
T PDEH+
Sbjct: 143 TIPDEHA 149


>sp|Y004_NPVAC|UNCHARACTERIZED 17.6 kDa protein in|Autographa californica nuclear polyhedrosis

Query: 1 VTTPDEHS 8
V +PD+HS
Sbjct: 100 VPSPDDHS 107


>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 2 TTPDEHS 8
T PDEH+
Sbjct: 143 TIPDEHA 149




148|Sequence|736|745|EHSSMLIHIL

>sp|VP3_EHDVA|CORE protein VP3|Epizootic hemorrhagic disease virus 2

Query: 1 EHSSMLIHIL 10
EH +M+ HIL
Sbjct: 176 EHRAMVQHIL 185


>sp|VP3_EHDV1|CORE protein VP3|Epizootic hemorrhagic disease virus 1

Query: 1 EHSSMLIHIL 10
EH +M+ H+L
Sbjct: 176 EHRAMIQHVL 185




149|Sequence|741|750|LIHILLPMVF

>sp|YR722_MIMIV|UNCHARACTERIZED protein R722|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LIHILLP 7
L HILLP
Sbjct: 62 LFHILLP 68


>sp|CVC1_SHV21|CAPSID vertex component 1|Saimiriine herpesvirus 2 (strain 11)

Query: 1 LIHILLPMVF 10
++H+LLP F
Sbjct: 18 IVHLLLPQTF 27


>sp|5057R_ASFM2|PROTEIN MGF 505-7R|African swine fever virus (isolate

Query: 3 HILLPMV 9
HILLPM+
Sbjct: 108 HILLPMI 114


>sp|CVC1_HHV8P|CAPSID vertex component 1|Human herpesvirus 8 type P

Query: 1 LIHILLPMVF 10
L H++LP F
Sbjct: 18 LAHVVLPRTF 27


>sp|MCES_SWPVK|MRNA-CAPPING enzyme small subunit|Swinepox virus (strain Kasza) (SWPV)

Query: 2 IHILLP 7
IHILLP
Sbjct: 12 IHILLP 17




150|Sequence|746|755|LPMVFCVLLI

>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)

Query: 1 LPMVFC 6
LP+VFC
Sbjct: 97 LPIVFC 102


>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)

Query: 4 VFCVLLI 10
+FC+LLI
Sbjct: 452 LFCILLI 458


>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)

Query: 4 VFCVLLI 10
+FC+LLI
Sbjct: 451 LFCILLI 457


>sp|POL_JEMBR|GAG-POL polyprotein|Jembrana disease virus (JDV)

Query: 3 MVFCVLLI 10
+VFC+L++
Sbjct: 1252 IVFCILML 1259


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 LPMVFCVLLI 10
+P+ FC+L I
Sbjct: 3122 MPLWFCLLYI 3131


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 LPMVFCVLLI 10
+P+ FC+L I
Sbjct: 3122 MPLWFCLLYI 3131


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 LPMVFCVLLI 10
+P+ FC+L I
Sbjct: 3122 MPLWFCLLYI 3131


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 LPMVFCVLLI 10
+P+ FC+L I
Sbjct: 3122 MPLWFCLLYI 3131


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 LPMVFCVLLI 10
+P+ FC+L I
Sbjct: 3122 MPLWFCLLYI 3131


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 LPMVFCVLLI 10
+P+ FC+L I
Sbjct: 3122 MPLWFCLLYI 3131


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 LPMVFCVLLI 10
+P+ FC+L I
Sbjct: 3122 MPLWFCLLYI 3131


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 LPMVFCVLLI 10
+P+ FC+L I
Sbjct: 3122 MPLWFCLLYI 3131


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 LPMVFCVLLI 10
+P+ FC+L I
Sbjct: 3122 MPLWFCLLYI 3131


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 LPMVFCVLLI 10
+P+ FC+L I
Sbjct: 3122 MPLWFCLLYI 3131


>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)

Query: 3 MVFCVLLI 10
+V+CVLL+
Sbjct: 641 LVWCVLLV 648




151|Sequence|751|760|CVLLIMVMCY

>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 1 CVLLIMVMC 9
CV +IMV C
Sbjct: 693 CVAIIMVSC 701


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 CVLLIMVMC 9
CV +IMV C
Sbjct: 694 CVAIIMVSC 702


>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)

Query: 1 CVLLIMVMC 9
C+LL+++ C
Sbjct: 591 CILLMLIWC 599


>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 CVLLIMVMC 9
CV +IMV C
Sbjct: 695 CVAIIMVSC 703


>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 CVLLIMVMC 9
CV +IMV C
Sbjct: 695 CVAIIMVSC 703


>sp|E2_FOWPN|PROTEIN E2 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 5 IMVMCY 10
+MVMCY
Sbjct: 349 LMVMCY 354


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 CVLLIMVMC 9
C +IMV C
Sbjct: 695 CAAIIMVSC 703




152|Sequence|756|765|MVMCYLKSQW

>sp|RDRP_PVXX3|RNA replication protein|Potato virus X (strain X3)

Query: 2 VMCYLKSQW 10
+M +LKSQW
Sbjct: 1157 IMVFLKSQW 1165


>sp|RDRP_PVXHB|RNA replication protein|Potato virus X (strain HB)

Query: 2 VMCYLKSQW 10
+M +LKSQW
Sbjct: 1157 IMVFLKSQW 1165


>sp|RDRP_PVXCP|RNA replication protein|Potato virus X (strain CP)

Query: 2 VMCYLKSQW 10
+M +LKSQW
Sbjct: 1157 IMVFLKSQW 1165


>sp|RDRP_PVX|RNA replication protein|Potato virus X (PVX)

Query: 2 VMCYLKSQW 10
+M +LKSQW
Sbjct: 1157 IMVFLKSQW 1165


>sp|E2_FOWPN|PROTEIN E2 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 1 MVMCYLK 7
MVMCYL+
Sbjct: 350 MVMCYLR 356


>sp|RDRP_P1AMV|RNA replication protein|Plantago asiatica mosaic potexvirus (P1AMV)

Query: 2 VMCYLKSQW 10
++ +LKSQW
Sbjct: 1085 ILIFLKSQW 1093


>sp|RDRP_BOTVX|RNA replication protein|Botrytis virus X (isolate Botrytis

Query: 2 VMCYLKSQW 10
V +LKSQW
Sbjct: 1066 VALFLKSQW 1074


>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 MVMCYLKSQ 9
+V+C+L+SQ
Sbjct: 198 LVICFLRSQ 206


>sp|POL2_BRAV|RNA2 polyprotein|Blackcurrant reversion association virus (BRAV)

Query: 3 MCYLKSQW 10
MC L+S W
Sbjct: 16 MCALRSTW 23


>sp|RDRP_LOLV|RNA-DIRECTED RNA polymerase|Lolium latent virus (isolate Lolium/USA/US1/-)

Query: 5 YLKSQW 10
YLK+QW
Sbjct: 1408 YLKAQW 1413


>sp|RDRP_ICRSV|RNA replication protein|Indian citrus ringspot virus (isolate

Query: 2 VMCYLKSQW 10
+ +LKSQW
Sbjct: 1358 IQLFLKSQW 1366


>sp|IR11_HCMVA|VIRAL Fc-gamma receptor-like protein IR11|Human cytomegalovirus (strain

Query: 1 MVMCYLKSQ 9
+V+C+L+SQ
Sbjct: 198 LVICFLRSQ 206


>sp|RDRP_PMV|RNA replication protein|Papaya mosaic potexvirus (PMV)

Query: 1 MVMCYLKSQW 10
++ +LKSQW
Sbjct: 1241 VISLFLKSQW 1250


>sp|RDRP_WCMVO|RNA replication protein|White clover mosaic virus (strain

Query: 2 VMCYLKSQW 10
+ +LKSQW
Sbjct: 992 IALFLKSQW 1000


>sp|RDRP_WCMVM|RNA replication protein|White clover mosaic virus (strain

Query: 2 VMCYLKSQW 10
+ +LKSQW
Sbjct: 992 IALFLKSQW 1000


>sp|RDRP_NMV|RNA replication protein|Narcissus mosaic virus (NMV)

Query: 2 VMCYLKSQW 10
+ +LKSQW
Sbjct: 1293 IALFLKSQW 1301


>sp|RDRP_SMYEA|RNA replication protein|Strawberry mild yellow edge-associated virus

Query: 5 YLKSQW 10
+LKSQW
Sbjct: 1029 FLKSQW 1034


>sp|RDRP_FXMV|RNA replication protein|Foxtail mosaic virus

Query: 5 YLKSQW 10
+LKSQW
Sbjct: 1026 FLKSQW 1031


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 1 MVMCYLKSQW 10
MV +LK++W
Sbjct: 1233 MVASFLKARW 1242


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 1 MVMCYLKSQW 10
MV +LK++W
Sbjct: 1233 MVASFLKARW 1242


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 2 VMCYLKSQ 9
+ CYLK+Q
Sbjct: 2715 LTCYLKAQ 2722


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 2 VMCYLKSQ 9
+ CYLK+Q
Sbjct: 2721 LTCYLKAQ 2728


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 VMCYLKSQ 9
+ CYLK+Q
Sbjct: 2720 LTCYLKAQ 2727


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 VMCYLKSQ 9
+ CYLK+Q
Sbjct: 2721 LTCYLKAQ 2728


>sp|404L_IIV6|UNCHARACTERIZED protein 404L|Invertebrate iridescent virus 6 (IIV-6)

Query: 4 CYLKSQW 10
CY+ +QW
Sbjct: 183 CYIDTQW 189


>sp|YL051_MIMIV|UNCHARACTERIZED protein L51|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 MCYLKSQW 10
MC++ +W
Sbjct: 87 MCFISQEW 94




153|Sequence|761|770|LKSQWIKETC

>sp|RDRP_WCMVO|RNA replication protein|White clover mosaic virus (strain

Query: 1 LKSQWIKET 9
LKSQW+K+T
Sbjct: 996 LKSQWVKKT 1004


>sp|RDRP_WCMVM|RNA replication protein|White clover mosaic virus (strain

Query: 1 LKSQWIKET 9
LKSQW+K+T
Sbjct: 996 LKSQWVKKT 1004


>sp|RDRP_NMV|RNA replication protein|Narcissus mosaic virus (NMV)

Query: 1 LKSQWIKET 9
LKSQW+K+T
Sbjct: 1297 LKSQWVKKT 1305


>sp|RDRP_P1AMV|RNA replication protein|Plantago asiatica mosaic potexvirus (P1AMV)

Query: 1 LKSQWIKE 8
LKSQW+K+
Sbjct: 1089 LKSQWVKK 1096


>sp|RDRP_BOTVX|RNA replication protein|Botrytis virus X (isolate Botrytis

Query: 1 LKSQWIKE 8
LKSQW+K+
Sbjct: 1070 LKSQWVKK 1077


>sp|RDRP_FXMV|RNA replication protein|Foxtail mosaic virus

Query: 1 LKSQWIKE 8
LKSQW+K+
Sbjct: 1027 LKSQWVKK 1034


>sp|VE1_MMPV1|REPLICATION protein E1|Macaca mulata papillomavirus 1 (Rhpv

Query: 3 SQWIKETC 10
SQWIK+ C
Sbjct: 399 SQWIKQRC 406


>sp|RDRP_SMYEA|RNA replication protein|Strawberry mild yellow edge-associated virus

Query: 1 LKSQWIKE 8
LKSQW+K+
Sbjct: 1030 LKSQWVKK 1037


>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 WIKETC 10
W+KETC
Sbjct: 312 WLKETC 317


>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 WIKETC 10
W+KETC
Sbjct: 312 WLKETC 317


>sp|RDRP_SSDRV|RNA replication protein|Sclerotinia sclerotiorum debilitation-associated

Query: 1 LKSQWIKET 9
LK+QW+++T
Sbjct: 1294 LKTQWVRKT 1302


>sp|RDRP_ICRSV|RNA replication protein|Indian citrus ringspot virus (isolate

Query: 1 LKSQWIKE 8
LKSQW+K+
Sbjct: 1362 LKSQWVKK 1369


>sp|VGPCR_HHV8P|VIRAL G-protein coupled receptor|Human herpesvirus 8 type P

Query: 1 LKSQWIKETC 10
L+ +WI+++C
Sbjct: 277 LRRRWIRDSC 286


>sp|CEP1_PSHV1|CYTOPLASMIC envelopment protein 1|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 SQWIKETC 10
+ W KETC
Sbjct: 59 ANWAKETC 66


>sp|TPRT_ASFK5|TRANS-PRENYLTRANSFERASE swine fever virus (isolate

Query: 5 WIKETC 10
WIKE C
Sbjct: 176 WIKENC 181


>sp|RDRP_SHVX|RNA replication protein|Shallot virus X (ShVX)

Query: 2 KSQWIKE 8
KSQW+K+
Sbjct: 1340 KSQWVKK 1346


>sp|RDRP_PMV|RNA replication protein|Papaya mosaic potexvirus (PMV)

Query: 1 LKSQWIK 7
LKSQW+K
Sbjct: 1246 LKSQWVK 1252


>sp|VE1_COPV6|REPLICATION protein E1|Canine oral papillomavirus (strain Y62)

Query: 3 SQWIKETC 10
SQWI E C
Sbjct: 371 SQWIDERC 378


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 QWIKETC 10
QWI E C
Sbjct: 1962 QWINEDC 1968


>sp|CAPSD_SPV4|CAPSID protein VP1|Spiroplasma virus 4 (SpV4)

Query: 1 LKSQWIKE 8
L S+W+KE
Sbjct: 501 LSSEWLKE 508


>sp|POLS_MIDDV|STRUCTURAL polyprotein|Middelburg virus

Query: 3 SQWIKETC 10
++WI E+C
Sbjct: 643 TEWISESC 650


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 QWIKETC 10
QWI E C
Sbjct: 1962 QWINEDC 1968


>sp|TPRT_ASFM2|TRANS-PRENYLTRANSFERASE swine fever virus (isolate

Query: 5 WIKETC 10
WIKE C
Sbjct: 176 WIKEHC 181


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 QWIKETC 10
QWI E C
Sbjct: 1962 QWINEDC 1968


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 QWIKETC 10
QWI E C
Sbjct: 1962 QWINEDC 1968


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 QWIKETC 10
QWI E C
Sbjct: 1962 QWINEDC 1968


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 QWIKETC 10
QWI E C
Sbjct: 1962 QWINEDC 1968


>sp|POL1_BBWV2|RNA1 polyprotein|Broad bean wilt virus 2

Query: 5 WIKETC 10
WI ETC
Sbjct: 972 WIAETC 977


>sp|NCAP_SBVBH|NUCLEOPROTEIN Schmallenberg virus (isolate Bovine/BH80/Germany/2011)

Query: 3 SQWIKETC 10
++WI +TC
Sbjct: 101 ARWIADTC 108


>sp|TPRT_ASFWA|TRANS-PRENYLTRANSFERASE swine fever virus (isolate

Query: 5 WIKETC 10
WIKE C
Sbjct: 176 WIKEHC 181


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 4 QWIKETC 10
QWI E C
Sbjct: 1966 QWITEDC 1972


>sp|TPRT_ASFB7|TRANS-PRENYLTRANSFERASE swine fever virus (strain

Query: 5 WIKETC 10
WIKE C
Sbjct: 176 WIKEHC 181


>sp|TPRT_ASFP4|TRANS-PRENYLTRANSFERASE swine fever virus (isolate

Query: 5 WIKETC 10
WIKE C
Sbjct: 176 WIKEHC 181


>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3

Query: 1 LKSQWIKE 8
+KS WIKE
Sbjct: 654 IKSNWIKE 661


>sp|TEG7_EHV2|TEGUMENT protein UL51 homolog|Equine herpesvirus 2 (strain 86/87)

Query: 1 LKSQWIKETC 10
+ S+WI+ TC
Sbjct: 1 MSSRWIQWTC 10


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 3 SQWIKETC 10
S WI E C
Sbjct: 1479 SNWISECC 1486


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 3 SQWIKETC 10
S WI E C
Sbjct: 1479 SNWISECC 1486


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 3 SQWIKETC 10
S WI E C
Sbjct: 1479 SNWISECC 1486


>sp|GB_ELHVK|ENVELOPE glycoprotein B|Elephantid herpesvirus 1 (isolate Asian

Query: 1 LKSQWIKETC 10
L W+++TC
Sbjct: 204 LPGTWLRKTC 213


>sp|RDRP_PVXHB|RNA replication protein|Potato virus X (strain HB)

Query: 1 LKSQWIKE 8
LKSQW+ +
Sbjct: 1161 LKSQWVTK 1168


>sp|POLG_PESV|GENOME polyprotein|Porcine enteric sapovirus (isolate Swine/United

Query: 5 WIKETC 10
W+K TC
Sbjct: 236 WLKPTC 241


>sp|RDRP_PMTVS|REPLICASE large subunit|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 5 WIKETC 10
W+K++C
Sbjct: 1459 WVKQSC 1464


>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus

Query: 3 SQWIKETC 10
S+W+ TC
Sbjct: 49 SKWLNPTC 56


>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate

Query: 3 SQWIKETC 10
S+W+ TC
Sbjct: 49 SKWLNPTC 56


>sp|RDRP_PVXCP|RNA replication protein|Potato virus X (strain CP)

Query: 1 LKSQWI 6
LKSQW+
Sbjct: 1161 LKSQWV 1166


>sp|RDRP_PVX|RNA replication protein|Potato virus X (PVX)

Query: 1 LKSQWI 6
LKSQW+
Sbjct: 1161 LKSQWV 1166


>sp|RDRP_PVXX3|RNA replication protein|Potato virus X (strain X3)

Query: 1 LKSQWI 6
LKSQW+
Sbjct: 1161 LKSQWV 1166




154|Sequence|766|775|IKETCYPDIP

>sp|DPOL_OSHVF|DNA polymerase|Ostreid herpesvirus 1 (isolate France)

Query: 1 IKETCYPDIP 10
+ + CYPD+P
Sbjct: 71 VSKGCYPDLP 80


>sp|REV_CAEVC|PROTEIN Rev|Caprine arthritis encephalitis virus (strain

Query: 1 IKETCYPDIP 10
I+ + YPDIP
Sbjct: 39 IQNSKYPDIP 48


>sp|YL780_MIMIV|UNCHARACTERIZED protein L780|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 ETCYPDIP 10
++ YPD+P
Sbjct: 265 QSLYPDVP 272


>sp|E1B55_ADET1|E1B 55 kDa protein|Tree shrew adenovirus serotype 1

Query: 4 TCYPD 8
TCYPD
Sbjct: 327 TCYPD 331


>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus

Query: 1 IKETCYPDI 9
+ E+C+PD+
Sbjct: 113 VLESCWPDV 121


>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate

Query: 1 IKETCYPDI 9
+ E+C+PD+
Sbjct: 113 VLESCWPDV 121


>sp|PG094_VACCW|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Western Reserve)

Query: 1 IKETCYPDI 9
+ E+C+PD+
Sbjct: 113 VLESCWPDV 121


>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 IKETCYPDI 9
+ E+C+PD+
Sbjct: 113 VLESCWPDV 121


>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)

Query: 1 IKETCYPDI 9
+ E+C+PD+
Sbjct: 113 VLESCWPDV 121


>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)

Query: 1 IKETCYPDI 9
+ E+C+PD+
Sbjct: 113 VLESCWPDV 121


>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)

Query: 1 IKETCYPDI 9
+ E+C+PD+
Sbjct: 113 VLESCWPDV 121


>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9

Query: 1 IKETCYPD 8
++ETC PD
Sbjct: 244 VRETCDPD 251


>sp|ENV_SIVEK|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate EK505)

Query: 2 KETCYPDIP 10
K CY ++P
Sbjct: 572 KSVCYTNVP 580


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 IKETCYPDI 9
I +TCYP +
Sbjct: 6320 IIKTCYPQL 6328


>sp|R1AB_IBVK|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 ETCYPDI 9
+TCYP +
Sbjct: 212 KTCYPQL 218


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1 IKETCYP 7
+ +TCYP
Sbjct: 1636 LADTCYP 1642


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 ETCYPDI 9
+TCYP +
Sbjct: 6320 KTCYPQL 6326


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 ETCYPDI 9
+TCYP +
Sbjct: 6320 KTCYPQL 6326




155|Sequence|771|780|YPDIPDPYKS

>sp|YL780_MIMIV|UNCHARACTERIZED protein L780|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YPDIPD 6
YPD+PD
Sbjct: 268 YPDVPD 273


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 3 DIPDPYK 9
DIP PYK
Sbjct: 147 DIPQPYK 153


>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 YPDIPDPYK 9
YP++P P K
Sbjct: 230 YPNLPSPPK 238


>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 YPDIPDPYK 9
YP++P P K
Sbjct: 230 YPNLPSPPK 238


>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)

Query: 4 IPDPYK 9
+PDPYK
Sbjct: 2966 VPDPYK 2971


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 2 PDIPDPYK 9
P+IP P+K
Sbjct: 683 PEIPKPHK 690


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 2 PDIPDPYK 9
P+IP P+K
Sbjct: 683 PEIPKPHK 690


>sp|RDRP_PMTVS|REPLICASE large subunit|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 1 YPDIPDPYK 9
Y PDPYK
Sbjct: 1713 YKFAPDPYK 1721


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 2 PDIPDPYK 9
P+IP P+K
Sbjct: 684 PEIPKPHK 691


>sp|VF317_ASFM2|UNCHARACTERIZED protein F317L|African swine fever virus (isolate

Query: 4 IPDPYKS 10
IP PYK+
Sbjct: 135 IPSPYKA 141


>sp|VF317_ASFK5|UNCHARACTERIZED protein F317L|African swine fever virus (isolate

Query: 4 IPDPYKS 10
IP PYK+
Sbjct: 133 IPSPYKA 139


>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 2 PDIPDPYKS 10
P +PD YK+
Sbjct: 1289 PGVPDEYKT 1297


>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 2 PDIPDPYKS 10
P +PD YK+
Sbjct: 1289 PGVPDEYKT 1297


>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 2 PDIPDPYKS 10
P +PD YK+
Sbjct: 1289 PGVPDEYKT 1297


>sp|TSP_BPTWO|TAIL sheath protein|Staphylococcus phage Twort (strain DSM

Query: 1 YPDIPDPYKS 10
+PD DP KS
Sbjct: 480 FPDKNDPVKS 489


>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)

Query: 1 YPDIPDP 7
YPD P P
Sbjct: 497 YPDTPSP 503


>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum

Query: 2 PDIPDPYKS 10
PD+P P+ S
Sbjct: 1702 PDLPIPFYS 1710


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 3 DIPDPYK 9
+IP PYK
Sbjct: 147 EIPQPYK 153


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 3 DIPDPYK 9
+IP PYK
Sbjct: 147 NIPQPYK 153


>sp|REPA_PASVK|REPLICATION-ASSOCIATED protein A|Panicum streak virus (isolate Kenya)

Query: 1 YPDIPDPY 8
+PDI +PY
Sbjct: 186 FPDIAEPY 193


>sp|US03_CHV9D|SERINE/THREONINE-PROTEIN kinase US3 homolog|Cercopithecine herpesvirus 9 (strain DHV)

Query: 3 DIPDPY 8
DIPDPY
Sbjct: 335 DIPDPY 340


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 1 YPDIPDPYKS 10
YPDI Y+S
Sbjct: 1710 YPDIKFVYRS 1719


>sp|REP_PASVK|REPLICATION-ASSOCIATED protein|Panicum streak virus (isolate Kenya)

Query: 1 YPDIPDPY 8
+PDI +PY
Sbjct: 186 FPDIAEPY 193


>sp|YL166_MIMIV|PUTATIVE F-box protein L166|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 DIPDPYKS 10
DIP+P+K+
Sbjct: 122 DIPNPFKN 129


>sp|RDRP_RBDVR|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Raspberry bushy dwarf virus (isolate

Query: 4 IPDPYK 9
+PDPYK
Sbjct: 1594 VPDPYK 1599


>sp|POL_AVIRE|GAG-POL polyprotein|Avian reticuloendotheliosis virus

Query: 1 YPDIPDPY 8
+P +P+PY
Sbjct: 204 HPTVPNPY 211


>sp|SEMA_ALHV1|SEMAPHORIN-LIKE protein A3|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 YPDIPDP 7
YP++ DP
Sbjct: 406 YPEVADP 412




156|Sequence|776|785|DPYKSSILSL

>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 1 DPYKSSILSL 10
D Y+SS+ SL
Sbjct: 1259 DKYRSSVYSL 1268




157|Sequence|781|790|SILSLIKFKE

>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 2 ILSLIKFKE 10
+ SLIKFK+
Sbjct: 2166 VYSLIKFKD 2174


>sp|IKBL_ASFB7|IKB-LIKE protein|African swine fever virus (strain

Query: 1 SILSLIKF 8
++LSLIKF
Sbjct: 139 NVLSLIKF 146




158|Sequence|786|795|IKFKENPHLI

>sp|MUZZL_BPCA1|MUZZLE protein|Bacteroides phage crAss001 (Bacteroides phage

Query: 1 IKFKENPHLI 10
+K+K NPHL+
Sbjct: 827 MKYKSNPHLV 836


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 IKFKENPHLI 10
IK ENPHL+
Sbjct: 4712 IKDVENPHLM 4721


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 5 ENPHLI 10
ENPHL+
Sbjct: 3124 ENPHLL 3129


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 5 ENPHLI 10
ENPHL+
Sbjct: 5002 ENPHLM 5007


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 5 ENPHLI 10
ENPHL+
Sbjct: 4843 ENPHLM 4848


>sp|DPOL_EHV2|DNA polymerase catalytic subunit|Equine herpesvirus 2 (strain 86/87)

Query: 1 IKFKENPHL 9
+ +KE PHL
Sbjct: 469 VSYKEIPHL 477


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 1 IKFKENPHL 9
+KF PHL
Sbjct: 1452 VKFSPEPHL 1460


>sp|RDRP_YOMV|REPLICASE large subunit|Youcai mosaic virus (YoMV)

Query: 3 FKENPHLI 10
+ ENPH +
Sbjct: 170 YAENPHFV 177


>sp|RDRP_TVCV|REPLICASE large subunit|Turnip vein-clearing virus (TVCV)

Query: 3 FKENPHLI 10
+ ENPH +
Sbjct: 170 YAENPHFV 177


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1 IKFKENP 7
I+FK+NP
Sbjct: 1755 IRFKDNP 1761


>sp|POLG_ZYMVR|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 3 FKENPH 8
KENPH
Sbjct: 401 LKENPH 406


>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 3 FKENPH 8
+K+NPH
Sbjct: 12 YKDNPH 17


>sp|SCAF_BPSPP|CAPSID assembly scaffolding protein|Bacillus phage SPP1 (Bacteriophage

Query: 1 IKFKENPHL 9
I F+ENP L
Sbjct: 197 ILFRENPEL 205


>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)

Query: 3 FKENPH 8
+K+NPH
Sbjct: 12 YKDNPH 17


>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)

Query: 3 FKENPH 8
+K+NPH
Sbjct: 12 YKDNPH 17


>sp|YR559_MIMIV|UNCHARACTERIZED HTH-type transcriptional regulator R559|Acanthamoeba polyphaga

Query: 3 FKENPH 8
FK NPH
Sbjct: 31 FKSNPH 36


>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)

Query: 3 FKENPH 8
+K+NPH
Sbjct: 12 YKDNPH 17


>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 3 FKENPH 8
+K+NPH
Sbjct: 12 YKDNPH 17


>sp|MVP_ZYMVR|P3N-PIPO polyprotein|Zucchini yellow mosaic virus (strain

Query: 3 FKENPH 8
KENPH
Sbjct: 401 LKENPH 406


>sp|RIBX_MIMIV|N-GLYCOSIDASE R617|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 IKFKENPHLI 10
+KF +NP L+
Sbjct: 104 LKFSQNPDLM 113


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1 IKFKENPHLI 10
+++ NPHL+
Sbjct: 918 LEYINNPHLV 927


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1 IKFKENPHLI 10
+++ NPHL+
Sbjct: 918 LEYINNPHLV 927




159|Sequence|791|800|NPHLIIMNVS

***** No hits found ******


160|Sequence|796|805|IMNVSDCIPD

>sp|VP3_EHDVA|CORE protein VP3|Epizootic hemorrhagic disease virus 2

Query: 1 IMNVSDCIP 9
IMN++ C+P
Sbjct: 288 IMNIATCLP 296


>sp|VP3_BTV1A|CORE protein VP3|Bluetongue virus 1 (isolate Australia)

Query: 1 IMNVSDCIP 9
IMN++ C+P
Sbjct: 290 IMNIATCLP 298


>sp|VP3_BTV1S|CORE protein VP3|Bluetongue virus 1 (isolate South

Query: 1 IMNVSDCIP 9
IMN++ C+P
Sbjct: 290 IMNIATCLP 298


>sp|VP3_BTV17|CORE protein VP3|Bluetongue virus 17 (isolate USA)

Query: 1 IMNVSDCIP 9
IMN++ C+P
Sbjct: 290 IMNIATCLP 298


>sp|VP3_BTV11|CORE protein VP3|Bluetongue virus 11 (isolate USA)

Query: 1 IMNVSDCIP 9
IMN++ C+P
Sbjct: 290 IMNIATCLP 298


>sp|VP3_BTV10|CORE protein VP3|Bluetongue virus 10 (isolate USA)

Query: 1 IMNVSDCIP 9
IMN++ C+P
Sbjct: 290 IMNIATCLP 298


>sp|VP3_EHDV1|CORE protein VP3|Epizootic hemorrhagic disease virus 1

Query: 1 IMNVSDCIP 9
IMN++ C+P
Sbjct: 288 IMNIATCLP 296


>sp|CAPSD_BTV13|INNER capsid protein VP3|Bluetongue virus 13 (isolate USA)

Query: 1 IMNVSDCIP 9
IMN++ C+P
Sbjct: 290 IMNIATCLP 298


>sp|VP3_BTV2A|CORE protein VP3|Bluetongue virus 2 (isolate USA)

Query: 1 IMNVSDCIP 9
IMN++ C+P
Sbjct: 290 IMNIATCLP 298


>sp|RDRP_TOMS1|REPLICASE large subunit|Tomato mosaic virus (strain S-1)

Query: 2 MNVSDCIPD 10
+NV DCI D
Sbjct: 1173 LNVKDCILD 1181


>sp|RDRP_TOMK2|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 2 MNVSDCIPD 10
+NV DCI D
Sbjct: 1173 LNVKDCILD 1181


>sp|RDRP_TMVKR|REPLICASE large subunit|Tobacco mosaic virus (strain Korean

Query: 2 MNVSDCIPD 10
+NV DCI D
Sbjct: 1173 LNVKDCILD 1181


>sp|RDRP_TMV|REPLICASE large subunit|Tobacco mosaic virus (strain vulgare)

Query: 2 MNVSDCIPD 10
+NV DCI D
Sbjct: 1173 LNVKDCILD 1181


>sp|RDRP_TOML|REPLICASE large subunit|Tomato mosaic virus (strain L)

Query: 2 MNVSDCIPD 10
+NV DCI D
Sbjct: 1173 LNVKDCILD 1181


>sp|RDRP_TOMK1|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 2 MNVSDCIPD 10
+NV DCI D
Sbjct: 1173 LNVKDCILD 1181


>sp|RDRP_TMVOM|REPLICASE large subunit|Tobacco mosaic virus (strain OM)

Query: 2 MNVSDCIPD 10
+NV DCI D
Sbjct: 1173 LNVKDCILD 1181


>sp|RDRP_TMVB|REPLICASE large subunit|Tobacco mosaic virus (strain B935A)

Query: 2 MNVSDCIPD 10
+NV DCI D
Sbjct: 1173 LNVKDCILD 1181


>sp|RDRP_TMVRA|REPLICASE large subunit|Tobacco mosaic virus (strain Rakkyo)

Query: 2 MNVSDCIPD 10
+NV DCI D
Sbjct: 1173 LNVKDCILD 1181


>sp|RDRP_TBRFV|REPLICASE large subunit|Tomato brown rugose fruit virus

Query: 2 MNVSDCIPD 10
+NV DCI D
Sbjct: 1173 LNVKDCILD 1181


>sp|OBP_BPT5|PUTATIVE replication origin binding protein|Escherichia phage T5

Query: 4 VSDCIPD 10
VSDC PD
Sbjct: 585 VSDCGPD 591


>sp|TMP_BPSPB|PROBABLE tape measure protein|Bacillus phage SPbeta (Bacillus phage

Query: 1 IMNVSDCIPD 10
+ NVSD PD
Sbjct: 432 LQNVSDLTPD 441


>sp|RDRP_TMGMV|REPLICASE large subunit|Tobacco mild green mosaic virus

Query: 2 MNVSDCIPD 10
+NV DC+ D
Sbjct: 1168 LNVKDCVLD 1176


>sp|RDRP_PMMVS|REPLICASE large subunit|Pepper mild mottle virus (strain

Query: 2 MNVSDCIPD 10
+NV DC+ D
Sbjct: 1174 LNVKDCVLD 1182


>sp|RDRP_PMMVJ|REPLICASE large subunit|Pepper mild mottle virus (strain

Query: 2 MNVSDCIPD 10
+NV DC+ D
Sbjct: 1174 LNVKDCVLD 1182


>sp|RDRP_TMOB|REPLICASE large subunit|Tobamovirus Ob

Query: 2 MNVSDCIPD 10
+NV DC+ D
Sbjct: 1172 LNVKDCVLD 1180


>sp|GB_EHV2|ENVELOPE glycoprotein B|Equine herpesvirus 2 (strain 86/87)

Query: 1 IMNVSDCI 8
+++VSDCI
Sbjct: 517 VVSVSDCI 524


>sp|YR825_MIMIV|PUTATIVE ankyrin repeat protein R825|Acanthamoeba polyphaga mimivirus

Query: 2 MNVSDCIP 9
+N+ DCIP
Sbjct: 22 LNIIDCIP 29


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 IMNVSDCI 8
+ NVSDC+
Sbjct: 5643 LCNVSDCV 5650


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 IMNVSDCI 8
+ NVSDC+
Sbjct: 5641 LCNVSDCV 5648


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 IMNVSDCI 8
+ NVSDC+
Sbjct: 5641 LCNVSDCV 5648


>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48

Query: 6 DCIPD 10
DCIPD
Sbjct: 23 DCIPD 27


>sp|L_TAMVU|RNA-DIRECTED RNA polymerase L|Tamiami mammarenavirus (isolate Rat/United

Query: 3 NVSDCI 8
NVSDC+
Sbjct: 914 NVSDCL 919


>sp|E1B55_ADET1|E1B 55 kDa protein|Tree shrew adenovirus serotype 1

Query: 2 MNVSDCIPD 10
+N+S C PD
Sbjct: 323 VNLSTCYPD 331


>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50

Query: 6 DCIPD 10
DCIPD
Sbjct: 22 DCIPD 26




161|Sequence|801|810|DCIPDAIEVV

>sp|POLN_TYMVC|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 3 IPDAIEV 9
IPDAIE+
Sbjct: 285 IPDAIEL 291


>sp|POLN_TYMVA|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 3 IPDAIEV 9
IPDAIE+
Sbjct: 285 IPDAIEL 291


>sp|POLN_TYMV|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus

Query: 3 IPDAIEV 9
IPDAIE+
Sbjct: 285 IPDAIEL 291


>sp|VG27_SHV21|UNCHARACTERIZED gene 27 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 DCIPDAIEVV 10
+C P+++E+V
Sbjct: 206 NCHPESVEIV 215


>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 DCIPDA 6
+C+PDA
Sbjct: 467 ECVPDA 472


>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 DCIPDA 6
+C+PDA
Sbjct: 468 ECVPDA 473


>sp|UL28_HCMVA|UNCHARACTERIZED protein UL28|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 DCIPDA 6
+C+PDA
Sbjct: 146 ECVPDA 151


>sp|POLG_BVY3|GENOME polyprotein|Blackberry virus Y (isolate Blackberry

Query: 4 PDAIEVV 10
PDA+E+V
Sbjct: 3435 PDALEIV 3441


>sp|TSP_BPPCD|TAIL sheath protein|Clostridium phage phiCD119 (strain Clostridium

Query: 2 CIPDAIE 8
C+P+AIE
Sbjct: 105 CMPEAIE 111


>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)

Query: 1 DCIPDAIEVV 10
DC+ D+I+++
Sbjct: 545 DCLLDSIKII 554


>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48

Query: 1 DCIPD 5
DCIPD
Sbjct: 23 DCIPD 27


>sp|ALC_BPT4|PROTEIN alc|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 DCIPDAIE 8
D +PDA+E
Sbjct: 64 DMLPDAVE 71


>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50

Query: 1 DCIPD 5
DCIPD
Sbjct: 22 DCIPD 26


>sp|CAPSD_AQRVA|INNER capsid protein VP3|Aquareovirus A (isolate Chum

Query: 2 CIPDAIEV 9
C+PD +V
Sbjct: 870 CVPDGFQV 877




162|Sequence|806|815|AIEVVSKPEG

>sp|OE66_NPVOP|OCCLUSION-DERIVED virus envelope protein E66|Orgyia pseudotsugata multicapsid

Query: 1 AIEVVSKPEG 10
AIE V PEG
Sbjct: 304 AIENVGSPEG 313


>sp|OE66_NPVAC|NON-SULFATED chondroitin lyase E66|Autographa californica nuclear polyhedrosis

Query: 1 AIEVVSKPEG 10
AIE V PEG
Sbjct: 327 AIENVGSPEG 336


>sp|POLS_DXV96|STRUCTURAL polyprotein|Drosophila x virus (isolate Chung/1996)

Query: 1 AIEVVSKPEG 10
IEV+S P+G
Sbjct: 157 GIEVLSLPQG 166




163|Sequence|811|820|SKPEGTKIQF

>sp|YL111_MIMIV|UNCHARACTERIZED protein L111|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 SKPEGTKIQF 10
+KP+GTKI +
Sbjct: 73 TKPDGTKIWY 82


>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)

Query: 1 SKPEGTKIQF 10
+K EG+ IQF
Sbjct: 168 TKKEGSNIQF 177


>sp|POL_SFVCP|PRO-POL polyprotein|Simian foamy virus (isolate chimpanzee)

Query: 1 SKPEGTKI 8
S+PEG KI
Sbjct: 791 SRPEGVKI 798


>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1 SKPEGTKI 8
S+PEG KI
Sbjct: 791 SRPEGVKI 798


>sp|VP5_IPNVJ|PROTEIN VP5|Infectious pancreatic necrosis virus (strain

Query: 1 SKPEGTKIQ 9
S+P+GT+I+
Sbjct: 89 SEPDGTRIR 97


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 1 SKPEGTKIQ 9
SKPE KIQ
Sbjct: 145 SKPEPRKIQ 153


>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)

Query: 1 SKPEGTKIQF 10
SKPE KIQ
Sbjct: 145 SKPEPRKIQM 154


>sp|NS1_INBHT|NON-STRUCTURAL protein 1|Influenza B virus (strain B/HT/1984)

Query: 1 SKPEGTKIQF 10
S+PEGT++
Sbjct: 65 SEPEGTRMSL 74




164|Sequence|816|825|TKIQFLGTRK

>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 2 KIQFLGTRK 10
K++F GTR+
Sbjct: 1932 KVEFTGTRR 1940


>sp|VP1_RRSVT|STRUCTURAL protein VP1|Rice ragged stunt virus (isolate

Query: 4 QFLGTRK 10
FLGTRK
Sbjct: 900 HFLGTRK 906




165|Sequence|821|830|LGTRKSLTET

>sp|Y41_BPT7|PROTEIN 4.1|Escherichia phage T7 (Bacteriophage T7)

Query: 1 LGTRKSLTET 10
+GTR SLT+T
Sbjct: 1 MGTRCSLTDT 10




166|Sequence|826|835|SLTETELTKP

***** No hits found ******


167|Sequence|831|840|ELTKPNYLYL

>sp|YR608_MIMIV|UNCHARACTERIZED protein R608|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 TKPNYLYL 10
+KPNY+YL
Sbjct: 181 SKPNYVYL 188


>sp|CAPSD_BPKMV|MAJOR capsid protein|Pseudomonas phage phiKMV

Query: 1 ELTKPNY 7
+LT+PNY
Sbjct: 6 DLTRPNY 12


>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 249 ELNAPNYHY 257


>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 249 ELNAPNYHY 257


>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 268 ELNAPNYHY 276


>sp|NRAM_I73A0|NEURAMINIDASE A virus (strain A/Parrot/Ulster/1973

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 268 ELNAPNYHY 276


>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 268 ELNAPNYHY 276


>sp|NRAM_I34A0|NEURAMINIDASE A virus (strain A/Fowl

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 246 ELNAPNYHY 254


>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 268 ELNAPNYHY 276


>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 268 ELNAPNYHY 276


>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 253 ELNAPNYHY 261


>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 268 ELNAPNYHY 276


>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 268 ELNAPNYHY 276


>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 268 ELNAPNYHY 276


>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 268 ELNAPNYHY 276


>sp|POL2_ARMVS|RNA2 polyprotein|Arabis mosaic virus (isolate Syrah)

Query: 2 LTKPNYLY 9
L KPN++Y
Sbjct: 789 LGKPNFIY 796


>sp|NSP1_ROTAP|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Cow/South/Africa/Offal

Query: 2 LTKPNYL 8
LTKPNY+
Sbjct: 304 LTKPNYI 310


>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 268 ELDAPNYHY 276


>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 268 ELDAPNYHY 276


>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 268 ELDAPNYHY 276


>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 268 ELDAPNYHY 276


>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 268 ELDAPNYHY 276


>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 240 ELDAPNYHY 248


>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 248 ELDAPNYHY 256


>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 248 ELDAPNYHY 256


>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 248 ELDAPNYHY 256


>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 248 ELDAPNYHY 256


>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 248 ELDAPNYHY 256


>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 248 ELDAPNYHY 256


>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 248 ELDAPNYHY 256


>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 248 ELDAPNYHY 256


>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky

Query: 1 ELTKPNYLY 9
EL PNY Y
Sbjct: 248 ELDAPNYHY 256


>sp|CEP2_GAHVM|CYTOPLASMIC envelopment protein 2|Gallid herpesvirus 2 (strain

Query: 2 LTKPNYLYL 10
LT+P LYL
Sbjct: 83 LTRPKNLYL 91


>sp|NSP1_ROTB4|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Cow/United

Query: 1 ELTKPNYLY 9
+L KPNY++
Sbjct: 303 KLVKPNYIF 311


>sp|NSP1_ROTBU|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Cow/United

Query: 1 ELTKPNYLY 9
+L KPNY++
Sbjct: 303 KLVKPNYIF 311


>sp|NSP1_ROTBA|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Cow/Thailand/A44/1988/G10P8[11])

Query: 1 ELTKPNYLY 9
+L KPNY++
Sbjct: 303 KLVKPNYIF 311


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 LTKPNYLY 9
+++PNY+Y
Sbjct: 326 VSEPNYIY 333


>sp|NSP1_ROTBB|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Cow/United

Query: 1 ELTKPNYLY 9
+L KPNY++
Sbjct: 303 KLVKPNYIF 311


>sp|POL2_ARMV|RNA2 polyprotein|Arabis mosaic virus (ArMV)

Query: 2 LTKPNYLY 9
L KPN++Y
Sbjct: 164 LGKPNFIY 171


>sp|NSP1_ROTW3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Cow/United

Query: 1 ELTKPNYLY 9
L KPNY++
Sbjct: 303 RLVKPNYIF 311


>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United

Query: 1 ELTKPNYLY 9
L KPNY++
Sbjct: 303 RLVKPNYIF 311


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 LTKPNYLY 9
+++PNY+Y
Sbjct: 326 VSEPNYIY 333


>sp|NSP1_ROTRF|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1])

Query: 1 ELTKPNYLY 9
L KPNY++
Sbjct: 303 RLVKPNYIF 311


>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24

Query: 2 LTKPNYLYL 10
+ +PNY YL
Sbjct: 529 MAEPNYRYL 537


>sp|RDRP_PLRV1|PROTEIN P1-P2|Potato leafroll virus (strain Potato/Scotland/strain

Query: 2 LTKPNYLY 9
+T PNY++
Sbjct: 391 ITSPNYVF 398


>sp|YL755_MIMIV|UNCHARACTERIZED protein L755|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LTKPNYLY 9
+ KPN++Y
Sbjct: 43 IKKPNFIY 50


>sp|RDRP_PLRVW|PROTEIN P1-P2|Potato leafroll virus (strain

Query: 2 LTKPNYLY 9
+T PNY++
Sbjct: 391 ITSPNYVF 398


>sp|P1_PLRV1|PROTEIN P1|Potato leafroll virus (strain Potato/Scotland/strain

Query: 2 LTKPNYLY 9
+T PNY++
Sbjct: 391 ITSPNYVF 398


>sp|P1_PLRVW|PROTEIN P1|Potato leafroll virus (strain

Query: 2 LTKPNYLY 9
+T PNY++
Sbjct: 391 ITSPNYVF 398




168|Sequence|836|845|NYLYLLPTEK

>sp|RIR2_ASFM2|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|African swine fever virus (isolate

Query: 1 NYLYLLPTEK 10
NY+Y +P EK
Sbjct: 211 NYVYNIPEEK 220


>sp|RIR2_ASFB7|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|African swine fever virus (strain

Query: 1 NYLYLLPTEK 10
NY+Y +P EK
Sbjct: 218 NYVYNIPEEK 227


>sp|RIR2_ASFWA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|African swine fever virus (isolate

Query: 1 NYLYLLPTEK 10
NY+Y +P EK
Sbjct: 211 NYVYNIPEEK 220


>sp|P4_RTBVP|PROTEIN P4|Rice tungro bacilliform virus (isolate

Query: 1 NYLYLLPTEK 10
+YLYLL +E+
Sbjct: 64 DYLYLLESER 73


>sp|REP_BPI22|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage I2-2 (Bacteriophage I2-2)

Query: 1 NYLYLLPT 8
NY++ LPT
Sbjct: 125 NYMFELPT 132


>sp|HELI_ICHVA|PROBABLE ATP-dependent helicase 25|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 YLYLLPTEK 10
Y+++LPT++
Sbjct: 360 YVFVLPTQE 368


>sp|RIR2_ASFP4|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|African swine fever virus (isolate

Query: 1 NYLYLLPTEK 10
NY+Y +P E+
Sbjct: 211 NYVYNIPEER 220


>sp|YR634_MIMIV|PUTATIVE ankyrin repeat protein R634|Acanthamoeba polyphaga mimivirus

Query: 1 NYLYLLPTE 9
N YLLP E
Sbjct: 3 NTFYLLPVE 11


>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)

Query: 2 YLYLLPTEK 10
+LY+LP E+
Sbjct: 18 WLYILPKEQ 26


>sp|VP03_SHV21|PROBABLE membrane antigen 3|Saimiriine herpesvirus 2 (strain 11)

Query: 1 NYLYLLPTEK 10
++L+LL TEK
Sbjct: 768 SFLFLLTTEK 777




169|Sequence|841|850|LPTEKNHSGP

>sp|RIR1_GAHVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Gallid herpesvirus 2 (strain

Query: 1 LPTEKNHSG 9
+PTEK+HSG
Sbjct: 532 VPTEKSHSG 540


>sp|CAPSD_CPVKS|CAPSID protein|Cryptosporidium parvum virus 1 (strain

Query: 1 LPTEKNHS 8
PTEKNHS
Sbjct: 269 FPTEKNHS 276


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1 LPTEKNHSGP 10
+P E H GP
Sbjct: 1704 IPQENTHQGP 1713


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1 LPTEKNHSGP 10
+P E H GP
Sbjct: 1704 IPQENTHQGP 1713


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 1 LPTEKNH 7
LPT +NH
Sbjct: 214 LPTHENH 220


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1 LPTEKNH 7
LPT +NH
Sbjct: 214 LPTHENH 220


>sp|VF391_IIV6|UNCHARACTERIZED protein 391R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 LPTEKNHS 8
PT KNH+
Sbjct: 184 FPTTKNHN 191


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 1 LPTEKNH 7
LPT +NH
Sbjct: 214 LPTHENH 220


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1 LPTEKNH 7
LPT +NH
Sbjct: 214 LPTHENH 220


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1 LPTEKNH 7
LPT +NH
Sbjct: 214 LPTHENH 220


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 LPTEKNH 7
LPT +NH
Sbjct: 214 LPTHENH 220


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1 LPTEKNH 7
LPT +NH
Sbjct: 214 LPTHENH 220


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 LPTEKNH 7
LPT +NH
Sbjct: 214 LPTHENH 220


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1 LPTEKNH 7
LPT +NH
Sbjct: 214 LPTHENH 220


>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)

Query: 1 LPTEKNH 7
LPT +NH
Sbjct: 214 LPTHENH 220


>sp|EXLYS_BPT7|PEPTIDOGLYCAN transglycosylase gp16|Escherichia phage T7 (Bacteriophage T7)

Query: 1 LPTEKNHSGP 10
+PT K+ +GP
Sbjct: 41 VPTAKSKTGP 50


>sp|GLYC_BRSVA|MAJOR surface glycoprotein G|Bovine respiratory syncytial virus (strain

Query: 1 LPTEKNH 7
LPTE NH
Sbjct: 90 LPTEHNH 96


>sp|GLYC_BRSV2|MAJOR surface glycoprotein G|Bovine respiratory syncytial virus (strain

Query: 1 LPTEKNH 7
LPTE NH
Sbjct: 90 LPTEHNH 96




170|Sequence|846|855|NHSGPGPCIC

>sp|VF282_IIV3|PUTATIVE transcription factor 079L|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 SGPGPCIC 10
S P PC+C
Sbjct: 155 SSPPPCVC 162


>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 NHSGPGPCIC 10
N + P PCIC
Sbjct: 21 NQTCPCPCIC 30


>sp|ENV_SIVG1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.grivet

Query: 4 GPGPCI 9
GPGPC+
Sbjct: 418 GPGPCV 423


>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)

Query: 3 SGPGPCI 9
S PGPC+
Sbjct: 144 SKPGPCV 150


>sp|CAPSD_TYDVA|CAPSID protein|Tobacco yellow dwarf virus (strain

Query: 1 NHSGPGPC 8
++ GPGPC
Sbjct: 184 SYYGPGPC 191


>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)

Query: 3 SGPGPCIC 10
+GP P IC
Sbjct: 74 TGPKPAIC 81


>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)

Query: 3 SGPGPCIC 10
+GP P IC
Sbjct: 77 TGPKPAIC 84


>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)

Query: 3 SGPGPCIC 10
+GP P IC
Sbjct: 75 TGPKPAIC 82


>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)

Query: 3 SGPGPCIC 10
+GP P IC
Sbjct: 75 TGPKPAIC 82


>sp|ORFD_PSHV1|UNCHARACTERIZED protein ORFD|Psittacid herpesvirus 1 (isolate Amazon

Query: 4 GPGPC 8
GPGPC
Sbjct: 311 GPGPC 315


>sp|SPIKE_CVBEN|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 NHSGPGPCIC 10
+H G PC C
Sbjct: 570 DHCGGNPCTC 579


>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)

Query: 3 SGPGPCIC 10
+GP P IC
Sbjct: 75 TGPKPAIC 82


>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)

Query: 3 SGPGPCIC 10
+GP P IC
Sbjct: 75 TGPKPAIC 82


>sp|SPIKE_CVBLU|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 NHSGPGPCIC 10
+H G PC C
Sbjct: 570 DHCGGNPCTC 579


>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)

Query: 3 SGPGPCIC 10
+GP P IC
Sbjct: 75 TGPKPAIC 82


>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)

Query: 3 SGPGPCIC 10
+GP P IC
Sbjct: 76 TGPKPAIC 83


>sp|CAPSD_BEYDV|CAPSID protein|Bean yellow dwarf virus (BeYDV)

Query: 4 GPGPC 8
GPGPC
Sbjct: 178 GPGPC 182


>sp|VG66_BPML5|GENE 66 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 NHSGPGP 7
NH GP P
Sbjct: 82 NHDGPHP 88


>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 5 PGPCI 9
PGPCI
Sbjct: 538 PGPCI 542


>sp|REV_EIAVY|PROTEIN Rev|Equine infectious anemia virus (strain

Query: 2 HSGPGP 7
H GPGP
Sbjct: 64 HLGPGP 69


>sp|REV_EIAVC|PROTEIN Rev|Equine infectious anemia virus (isolate

Query: 2 HSGPGP 7
H GPGP
Sbjct: 64 HLGPGP 69


>sp|REV_EIAV9|PROTEIN Rev|Equine infectious anemia virus (isolate

Query: 2 HSGPGP 7
H GPGP
Sbjct: 64 HLGPGP 69


>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 PGPCI 9
PGPCI
Sbjct: 548 PGPCI 552


>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 PGPCI 9
PGPCI
Sbjct: 548 PGPCI 552


>sp|MCP_SHV21|MAJOR capsid protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 NHSGPGPC 8
+HS P PC
Sbjct: 1216 DHSLPDPC 1223


>sp|ENV_SIVVT|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet

Query: 4 GPGPCI 9
PGPC+
Sbjct: 432 APGPCV 437


>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)

Query: 2 HSGPGPCI 9
H+ PG C+
Sbjct: 771 HASPGVCV 778


>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 HSGPGPCI 9
H+ PG C+
Sbjct: 771 HASPGVCV 778


>sp|POLG_SVDVU|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 1 NHSGPGPCI 9
N GPGP +
Sbjct: 792 NDGGPGPIV 800


>sp|POLG_SVDVH|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 1 NHSGPGPCI 9
N GPGP +
Sbjct: 792 NDGGPGPIV 800


>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 3 SGPGPC 8
SG GPC
Sbjct: 142 SGTGPC 147


>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 3 SGPGPC 8
SG GPC
Sbjct: 142 SGTGPC 147


>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 3 SGPGPC 8
SG GPC
Sbjct: 142 SGTGPC 147


>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 3 SGPGPC 8
SG GPC
Sbjct: 142 SGTGPC 147


>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)

Query: 3 SGPGPC 8
SG GPC
Sbjct: 142 SGTGPC 147


>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)

Query: 3 SGPGPC 8
SG GPC
Sbjct: 142 SGTGPC 147


>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 NHSGPGPC 8
+ S PGPC
Sbjct: 13 SQSQPGPC 20


>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 NHSGPGPC 8
+ S PGPC
Sbjct: 13 SQSQPGPC 20


>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 NHSGPGPC 8
+ S PGPC
Sbjct: 13 SQSQPGPC 20


>sp|ENV_SIVV1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet

Query: 5 PGPCI 9
PGPC+
Sbjct: 435 PGPCV 439


>sp|POL_JEMBR|GAG-POL polyprotein|Jembrana disease virus (JDV)

Query: 2 HSGPGPC 8
HS GPC
Sbjct: 1269 HSDNGPC 1275


>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67

Query: 1 NHSGPGPC 8
N +GPG C
Sbjct: 208 NSNGPGAC 215


>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote

Query: 3 SGPGPC 8
SG GPC
Sbjct: 142 SGTGPC 147


>sp|ENV_IPMAE|ENVELOPE glycoprotein|Mouse intracisternal a-particle MIAE (IAP-MIAE)

Query: 3 SGPGPCI 9
+GPG CI
Sbjct: 91 NGPGNCI 97


>sp|POL1_BBWVS|RNA1 polyprotein|Broad bean wilt virus 1

Query: 1 NHSGPGPC 8
N G GPC
Sbjct: 930 NWEGQGPC 937


>sp|POL_BIV29|GAG-POL polyprotein|Bovine immunodeficiency virus (strain R29)

Query: 2 HSGPGPC 8
HS GPC
Sbjct: 1311 HSDNGPC 1317


>sp|VE1_MNPVA|REPLICATION protein E1|Mastomys natalensis papillomavirus (isolate African

Query: 2 HSGPGPCIC 10
HS P C+C
Sbjct: 251 HSDPLLCLC 259


>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 3 SGPGPC 8
SG GPC
Sbjct: 142 SGTGPC 147


>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 3 SGPGPC 8
SG GPC
Sbjct: 142 SGTGPC 147


>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 3 SGPGPC 8
SG GPC
Sbjct: 142 SGTGPC 147


>sp|GD_CHV1|ENVELOPE glycoprotein D|Cercopithecine herpesvirus 1 (CeHV-1) (Simian

Query: 2 HSGPGPC 8
H G GPC
Sbjct: 208 HRGKGPC 214


>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 3 SGPGPC 8
SG GPC
Sbjct: 142 SGTGPC 147


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 2 HSGPGPC 8
HS PG C
Sbjct: 966 HSEPGDC 972


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 2 HSGPGPC 8
HS PG C
Sbjct: 966 HSEPGDC 972


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 2 HSGPGPC 8
HS PG C
Sbjct: 966 HSEPGDC 972


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 2 HSGPGPC 8
HS PG C
Sbjct: 966 HSEPGDC 972


>sp|VG75_EHV2|PROBABLE membrane antigen 75|Equine herpesvirus 2 (strain 86/87)

Query: 1 NHSGPGP 7
+HS PGP
Sbjct: 810 SHSPPGP 816




171|Sequence|851|860|GPCICFENLT

>sp|POLG_OMV|GENOME polyprotein|Ornithogalum mosaic virus

Query: 1 GPCICF 6
GPC CF
Sbjct: 398 GPCQCF 403


>sp|POLN_AHEV|NON-STRUCTURAL polyprotein pORF1|Avian hepatitis E virus (isolate

Query: 1 GPCICFENL 9
GPC F NL
Sbjct: 1423 GPCGAFSNL 1431


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 PCICFENLT 10
PC+C +T
Sbjct: 1595 PCLCIHAMT 1603


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 PCICFENLT 10
PC+C +T
Sbjct: 1595 PCLCIHAMT 1603


>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)

Query: 2 PCICFENLT 10
PC+C +T
Sbjct: 1595 PCLCIHAMT 1603


>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 CICFEN 8
C+C+EN
Sbjct: 634 CMCYEN 639


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 2 PCICFEN 8
PCI F N
Sbjct: 1809 PCIVFRN 1815


>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 CICFEN 8
C+C+EN
Sbjct: 634 CMCYEN 639


>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 CICFEN 8
C+C+EN
Sbjct: 634 CMCYEN 639


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 PCICFENLT 10
PC+C +T
Sbjct: 1595 PCLCIHAMT 1603


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3 CICFEN 8
C+CF+N
Sbjct: 6197 CVCFDN 6202


>sp|NS1_PAVL3|INITIATOR protein NS1|Parvovirus LuIII

Query: 3 CICFENL 9
C+CF N+
Sbjct: 200 CVCFGNM 206


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 PCICFENLT 10
PC+C +T
Sbjct: 1595 PCLCIHAMT 1603


>sp|PKG16_BPB03|DNA packaging protein|Bacillus phage B103 (Bacteriophage B103)

Query: 1 GPCICFEN 8
G CIC N
Sbjct: 140 GRCICLSN 147


>sp|Y044_SIFVH|UNCHARACTERIZED protein 44|Sulfolobus islandicus filamentous virus (isolate

Query: 1 GPCICFEN 8
G CI FEN
Sbjct: 68 GVCISFEN 75


>sp|VP6_FDVS|UNCHARACTERIZED protein VP6|Fiji disease virus (isolate Sugarcane)

Query: 1 GPCICFEN 8
G CI FEN
Sbjct: 749 GECIQFEN 756


>sp|DNBI_ALHV1|MAJOR DNA-binding protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 PCICFENL 9
PC+C L
Sbjct: 463 PCVCINTL 470


>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)

Query: 1 GPCICF 6
G CICF
Sbjct: 276 GSCICF 281


>sp|GI_HHV23|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain 333)

Query: 1 GPCICF 6
G CICF
Sbjct: 276 GSCICF 281


>sp|1A_BBMV|REPLICATION protein 1a|Broad bean mottle virus

Query: 3 CICFENLT 10
CI FEN++
Sbjct: 304 CIWFENIS 311


>sp|GI_HHV11|ENVELOPE glycoprotein I|Human herpesvirus 1 (strain 17)

Query: 1 GPCICF 6
G CICF
Sbjct: 290 GSCICF 295


>sp|PRO_JSRV|GAG-PRO polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 5 CFENLT 10
CF+NLT
Sbjct: 179 CFKNLT 184


>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 5 CFENLT 10
CF+NLT
Sbjct: 179 CFKNLT 184


>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain

Query: 2 PCICFEN 8
PC+C E+
Sbjct: 486 PCVCQES 492


>sp|SPI1_SWPVK|PROBABLE serine proteinase inhibitor 1|Swinepox virus (strain Kasza)

Query: 2 PCICFE 7
PCIC +
Sbjct: 67 PCICMD 72


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1 GPCICFEN 8
G C+ FEN
Sbjct: 1467 GSCMVFEN 1474


>sp|GAG_JSRV|GAG polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 5 CFENLT 10
CF+NLT
Sbjct: 179 CFKNLT 184


>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1 GPCICFEN 8
G C+ FEN
Sbjct: 1467 GSCMVFEN 1474


>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 PCICFENLT 10
PCIC + T
Sbjct: 27 PCICVNSTT 35


>sp|ENV_SIVEK|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate EK505)

Query: 1 GPCICFENLT 10
GP C N+T
Sbjct: 413 GPINCLSNIT 422




172|Sequence|856|865|FENLTYNQAA

>sp|ENV_MLVFP|ENVELOPE glycoprotein|Friend murine leukemia virus (isolate

Query: 3 NLTYNQAA 10
NLT NQAA
Sbjct: 202 NLTTNQAA 209


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 1 FENLTYNQAA 10
FE +NQAA
Sbjct: 1537 FEGTKFNQAA 1546


>sp|KR73_ICHVA|PROTEIN kinase ORF73|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 FENLTYNQ 8
F+N YNQ
Sbjct: 525 FDNRAYNQ 532




173|Sequence|861|870|YNQAASDSGS

>sp|VG36_ICHVA|UNCHARACTERIZED protein ORF36|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 YNQAASDSGS 10
YN A DSGS
Sbjct: 35 YNHALPDSGS 44


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 YNQAASDSG 9
YN+ ASD+G
Sbjct: 3015 YNRWASDNG 3023


>sp|ETF1_RFVKA|EARLY transcription factor 70 kDa|Rabbit fibroma virus (strain Kasza)

Query: 1 YNQAASDSGS 10
YN A+D GS
Sbjct: 403 YNSLANDDGS 412


>sp|ETF1_MYXVL|EARLY transcription factor 70 kDa|Myxoma virus (strain Lausanne) (MYXV)

Query: 1 YNQAASDSGS 10
YN A+D GS
Sbjct: 403 YNSLANDDGS 412


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 YNQAASDSG 9
YN+ ASD+G
Sbjct: 3015 YNRWASDNG 3023


>sp|RDRP_SCV23|RNA-DIRECTED RNA polymerase|Saccharomyces 23S RNA narnavirus (ScNV-23S)

Query: 1 YNQAASDSGS 10
YNQ A D G+
Sbjct: 515 YNQIAVDCGA 524


>sp|BP48_BPT4|BASEPLATE tail-tube junction protein gp48|Enterobacteria phage T4

Query: 1 YNQAASDSGS 10
YN ++ DSGS
Sbjct: 67 YNMSSRDSGS 76




174|Sequence|866|875|SDSGSCGHVP

>sp|RDRP_PLRV1|PROTEIN P1-P2|Potato leafroll virus (strain Potato/Scotland/strain

Query: 6 CGHVP 10
CGH+P
Sbjct: 591 CGHIP 595


>sp|POLG_PVYC|GENOME polyprotein|Potato virus Y (strain C)

Query: 4 GSCGHV 9
SCGHV
Sbjct: 22 ASCGHV 27


>sp|L_PARVP|RNA-DIRECTED RNA polymerase L|Parana mammarenavirus (isolate

Query: 1 SDSGSCGHV 9
S+SG GH+
Sbjct: 556 SNSGKVGHI 564


>sp|SPIKE_PEDV7|SPIKE glycoprotein|Porcine epidemic diarrhea virus (strain

Query: 3 SGSCGHVP 10
SGS G+VP
Sbjct: 756 SGSIGYVP 763


>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)

Query: 2 DSGSCGHVP 10
D GSCG P
Sbjct: 95 DPGSCGGAP 103




175|Sequence|871|880|CGHVPVSPKA

>sp|REP_TYLCI|REPLICATION-ASSOCIATED protein|Tomato yellow leaf curl virus

Query: 1 CGHVPVSPK 9
CGH+ +SPK
Sbjct: 239 CGHLDLSPK 247


>sp|REP_TLCVA|REPLICATION-ASSOCIATED protein|Tomato leaf curl virus (strain

Query: 1 CGHVPVSPK 9
CGH+ +SPK
Sbjct: 241 CGHLDLSPK 249


>sp|REP_ICMV|REPLICATION-ASSOCIATED protein|Indian cassava mosaic virus (ICMV)

Query: 1 CGHVPVSPK 9
CGH+ +SPK
Sbjct: 240 CGHLDLSPK 248


>sp|REP_TYLCC|REPLICATION-ASSOCIATED protein|Tomato yellow leaf curl China

Query: 1 CGHVPVSPK 9
CGH+ +SPK
Sbjct: 241 CGHLDLSPK 249


>sp|REP_CLVN|REPLICATION-ASSOCIATED protein|African cassava mosaic virus (isolate

Query: 1 CGHVPVSPK 9
CGH+ +SPK
Sbjct: 240 CGHLDLSPK 248


>sp|REP_PHUV|REPLICATION-ASSOCIATED protein|Pepper huasteco yellow vein virus

Query: 1 CGHVPVSPK 9
CGH+ +SPK
Sbjct: 241 CGHMDLSPK 249


>sp|REP_CLVK|REPLICATION-ASSOCIATED protein|African cassava mosaic virus (isolate

Query: 1 CGHVPVSPK 9
CGH+ +SPK
Sbjct: 240 CGHLDLSPK 248


>sp|DPOL_GSHV|PROTEIN P|Ground squirrel hepatitis virus (strain

Query: 3 HVPVSPKA 10
H+PVSP A
Sbjct: 474 HIPVSPAA 481


>sp|POL_SIVVG|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 156 HVPLSPR 162


>sp|ENV_SIVVT|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet

Query: 2 GHVPVSPK 9
G+VP+SP+
Sbjct: 731 GYVPLSPQ 738


>sp|POL_SIVV1|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 152 HVPLSPR 158


>sp|POL_SIVVT|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 156 HVPLSPR 162


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 147 HVPLSPR 153


>sp|DPOL_WHV4|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 3 HVPVSPKA 10
H+P+SP A
Sbjct: 477 HIPISPAA 484


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 146 HVPLSPR 152


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 146 HVPLSPR 152


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 146 HVPLSPR 152


>sp|DPOL_WHV2|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 3 HVPVSPKA 10
H+P+SP A
Sbjct: 476 HIPISPAA 483


>sp|DPOL_WHV5|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 3 HVPVSPKA 10
H+P+SP A
Sbjct: 477 HIPISPAA 484


>sp|DPOL_ASHV|PROTEIN P|Arctic squirrel hepatitis virus (ASHV)

Query: 3 HVPVSPKA 10
H+PVSP A
Sbjct: 472 HIPVSPAA 479


>sp|POLN_OYMV|NON-STRUCTURAL replication polyprotein|Ononis yellow mosaic virus

Query: 1 CGHVPVSP 8
CGH P++P
Sbjct: 1594 CGHPPINP 1601


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 146 HVPLSPR 152


>sp|DPOL_WHV3|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 3 HVPVSPKA 10
H+P+SP A
Sbjct: 477 HIPISPAA 484


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 146 HVPLSPR 152


>sp|DPOL_WHV1|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 3 HVPVSPKA 10
H+P+SP A
Sbjct: 472 HIPISPAA 479


>sp|GAG_SIVVG|GAG polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 156 HVPLSPR 162


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 HVPVSPK 9
H+P+SP+
Sbjct: 146 HIPLSPR 152


>sp|GAG_SIVV1|GAG polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 152 HVPLSPR 158


>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 2 GHVPVSPK 9
G +P++PK
Sbjct: 2052 GRIPITPK 2059


>sp|DPOL_WHV6|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 3 HVPVSPKA 10
H+P+SP A
Sbjct: 149 HIPISPAA 156


>sp|GAG_SIVVT|GAG polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 152 HVPLSPR 158


>sp|DNBI_SHV21|MAJOR DNA-binding protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 CGHVPVSPK 9
CG++ V PK
Sbjct: 22 CGYIYVYPK 30


>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 146 HVPLSPR 152


>sp|POL_SRV2|GAG-PRO-POL polyprotein|Simian retrovirus SRV-2

Query: 3 HVPVSPK 9
H+P SPK
Sbjct: 1261 HLPASPK 1267


>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 146 HVPLSPR 152


>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 146 HVPLSPR 152


>sp|YO19_ADEG1|UNCHARACTERIZED protein ORF19|Fowl adenovirus A serotype 1

Query: 3 HVPVSPK 9
H+PV PK
Sbjct: 334 HLPVPPK 340


>sp|POL_MPMV|GAG-PRO-POL polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian

Query: 3 HVPVSPK 9
H+P SPK
Sbjct: 1264 HLPASPK 1270


>sp|POL_SRV1|GAG-PRO-POL polyprotein|Simian retrovirus SRV-1

Query: 3 HVPVSPK 9
H+P SPK
Sbjct: 1265 HLPASPK 1271


>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 146 HVPLSPR 152


>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 146 HVPLSPR 152


>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3 HVPVSPK 9
HVP+SP+
Sbjct: 147 HVPLSPR 153


>sp|VE5_HPV18|PROBABLE protein E5|Human papillomavirus type 18

Query: 1 CGHVPVSPKA 10
C HVP+ P
Sbjct: 17 CCHVPLLPSV 26




176|Sequence|876|885|VSPKAPSMLG

>sp|L_MILVL|RNA-DIRECTED RNA polymerase L|Mirafiori lettuce virus (isolate

Query: 1 VSPKAPSMLG 10
+SP P +LG
Sbjct: 817 ISPNGPKLLG 826


>sp|ENLYS_BPHC1|SAR-ENDOLYSIN phage HP1 (strain HP1c1)

Query: 1 VSPKAPSML 9
VSPKA SM+
Sbjct: 35 VSPKAVSMI 43


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 2 SPKAPSMLG 10
+PK+ SMLG
Sbjct: 544 TPKSMSMLG 552




177|Sequence|881|890|PSMLGLMTSP

>sp|DPOL_ADES1|DNA polymerase|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 PSMLGLMTSP 10
PS LG+ T P
Sbjct: 553 PSFLGVFTEP 562




178|Sequence|886|895|LMTSPENVLK

>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)

Query: 1 LMTSPENVL 9
M SPENV+
Sbjct: 220 FMASPENVI 228


>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 LMTSPENVL 9
M SPENV+
Sbjct: 220 FMASPENVI 228


>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 1 LMTSPENVL 9
M SPENV+
Sbjct: 220 FMASPENVI 228


>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /

Query: 1 LMTSPENVL 9
M SPENV+
Sbjct: 220 FMASPENVI 228


>sp|MCEL_CAMPS|MRNA-CAPPING enzyme catalytic subunit|Camelpox virus (strain CMS)

Query: 1 LMTSPENVL 9
M SPENV+
Sbjct: 220 FMASPENVI 228


>sp|MCEL_CAMPM|MRNA-CAPPING enzyme catalytic subunit|Camelpox virus (strain M-96)

Query: 1 LMTSPENVL 9
M SPENV+
Sbjct: 220 FMASPENVI 228


>sp|MCEL_VACCW|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Western Reserve)

Query: 1 LMTSPENVL 9
M SPENV+
Sbjct: 220 FMASPENVI 228


>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)

Query: 1 LMTSPENVL 9
M SPENV+
Sbjct: 220 FMASPENVI 228


>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)

Query: 1 LMTSPENVL 9
M SPENV+
Sbjct: 220 FMASPENVI 228


>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus

Query: 1 LMTSPENVL 9
M SPENV+
Sbjct: 220 FMASPENVI 228


>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate

Query: 1 LMTSPENVL 9
M SPENV+
Sbjct: 220 FMASPENVI 228


>sp|5052R_ASFP4|PROTEIN MGF 505-2R|African swine fever virus (isolate

Query: 1 LMTSPENVLK 10
L+ SPE V+K
Sbjct: 359 LLISPERVIK 368




179|Sequence|891|900|ENVLKALEKN

>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 ENVLKALEKN 10
EN +KA+ KN
Sbjct: 327 ENAIKAMHKN 336


>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 ENVLKALEKN 10
EN +KA+ KN
Sbjct: 327 ENAIKAMHKN 336


>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 ENVLKALEKN 10
EN +KA+ KN
Sbjct: 327 ENAIKAMHKN 336


>sp|POLG_SVV1|GENOME polyprotein|Seneca Valley virus (isolate -/United

Query: 2 NVLKALEKN 10
NV+K LEK+
Sbjct: 717 NVIKVLEKD 725


>sp|Y018_SIFVH|UNCHARACTERIZED protein 18|Sulfolobus islandicus filamentous virus (isolate

Query: 2 NVLKALEK 9
NVLK LEK
Sbjct: 84 NVLKTLEK 91


>sp|DNBI_GAHVM|MAJOR DNA-binding protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 ENVLKALEK 9
E ++KALEK
Sbjct: 578 ERMMKALEK 586




180|Sequence|896|905|ALEKNYMNSL

>sp|POLG_PVYHU|GENOME polyprotein|Potato virus Y (strain Hungarian)

Query: 2 LEKNYMNSL 10
+EKNY+N L
Sbjct: 910 MEKNYLNLL 918


>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)

Query: 2 LEKNYMNSL 10
+EKNY+N L
Sbjct: 910 MEKNYLNLL 918


>sp|RPB1_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 2 LEKNYMNSL 10
LEKN +N+L
Sbjct: 649 LEKNVVNTL 657


>sp|343L_IIV6|PROBABLE DNA-directed RNA polymerase subunit|Invertebrate iridescent virus

Query: 2 LEKNYMNSL 10
+EK Y+NSL
Sbjct: 67 IEKQYVNSL 75


>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)

Query: 2 LEKNYMNSL 10
LEKNY+ +L
Sbjct: 916 LEKNYVKAL 924




181|Sequence|901|910|YMNSLGEIPA

>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum

Query: 1 YMNSLGEIPA 10
Y+N GE PA
Sbjct: 2370 YVNKFGEPPA 2379


>sp|L_MOKV|LARGE structural protein|Mokola virus (MOKV)

Query: 2 MNSLGEIPA 10
++SLGE PA
Sbjct: 320 IHSLGEFPA 328


>sp|NSS_SFSV|NON-STRUCTURAL protein NS-S|Sandfly fever sicilian virus (SFS)

Query: 4 SLGEIPA 10
SLGE+PA
Sbjct: 72 SLGELPA 78


>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 2 MNSLGEIP 9
+NS+G+IP
Sbjct: 421 INSIGKIP 428


>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 2 MNSLGEIP 9
+NS+G+IP
Sbjct: 421 INSIGKIP 428


>sp|VG72_GAHVM|UNCHARACTERIZED gene 72 protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 YMNSLGEIPA 10
Y+ S+G +PA
Sbjct: 50 YVMSIGSVPA 59


>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 3 NSLGEIPA 10
N+LG IPA
Sbjct: 2949 NALGPIPA 2956


>sp|NEP_I56A2|NUCLEAR export protein|Influenza A virus (strain A/Duck/England/1/1956

Query: 1 YMNSLGE 7
Y NSLGE
Sbjct: 41 YRNSLGE 47




182|Sequence|906|915|GEIPAGETSL

>sp|DPO21_BPK64|DEPOLYMERASE, capsule KN5-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 3 IPAGETSL 10
IPAG+TS+
Sbjct: 1126 IPAGQTSI 1133


>sp|VNS1_EHDV2|NON-STRUCTURAL protein NS1|Epizootic hemorrhagic disease virus 2

Query: 1 GEIPAGE 7
GE PAGE
Sbjct: 264 GECPAGE 270


>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B

Query: 2 EIPAGETSL 10
E+P ETSL
Sbjct: 333 EMPGSETSL 341


>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A

Query: 2 EIPAGETSL 10
E+P ETSL
Sbjct: 333 EMPGSETSL 341


>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain

Query: 3 IPAGETS 9
+PAG+TS
Sbjct: 429 VPAGDTS 435


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 1 GEIPAGE 7
GEIPAG
Sbjct: 243 GEIPAGH 249


>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2 EIPAGETSL 10
IP GET+L
Sbjct: 354 HIPEGETTL 362




183|Sequence|911|920|GETSLNYVSQ

>sp|POLS_SAV1|STRUCTURAL polyprotein|Alphavirus salmon subtype 1 (SAV1)

Query: 1 GETSLNYVSQ 10
GETSL Y+ +
Sbjct: 425 GETSLRYLGR 434


>sp|POLS_SAV3|STRUCTURAL polyprotein|Alphavirus salmon subtype 3 (SAV3)

Query: 1 GETSLNYVSQ 10
GETSL Y+ +
Sbjct: 424 GETSLRYLGR 433


>sp|POLS_SAV2|STRUCTURAL polyprotein|Alphavirus salmon subtype 2 (SAV2)

Query: 1 GETSLNYVSQ 10
GETSL Y+ +
Sbjct: 426 GETSLRYLGR 435


>sp|V222_FOWPN|PUTATIVE ankyrin repeat protein FPV222|Fowlpox virus (strain NVSL) (FPV)

Query: 1 GETSLNY 7
GETSL+Y
Sbjct: 170 GETSLHY 176




184|Sequence|916|925|NYVSQLASPM

>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 NYVSQLASPM 10
N+V+ LASP+
Sbjct: 552 NFVNDLASPV 561


>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 NYVSQLASPM 10
N+V+ LASP+
Sbjct: 552 NFVNDLASPV 561


>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 NYVSQLASPM 10
N+V+ LASP+
Sbjct: 552 NFVNDLASPV 561


>sp|PTPN1_MDBVW|PROBABLE tyrosine phosphatase protein N1|Microplitis demolitor bracovirus

Query: 1 NYVSQLASPM 10
NY QL SP+
Sbjct: 220 NYQQQLLSPI 229


>sp|POL2_BRSV|RNA2 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 2 YVSQLASPM 10
YVS L +PM
Sbjct: 1140 YVSTLCAPM 1148


>sp|VP41_NPVOP|STRUCTURAL glycoprotein gp41|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 NYVSQLAS 8
NY++QLA+
Sbjct: 294 NYIAQLAT 301




185|Sequence|921|930|LASPMFGDKD

>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 2 ASPMFGDKD 10
+SP FGD D
Sbjct: 2053 SSPRFGDID 2061


>sp|GB_BHV2B|ENVELOPE glycoprotein B|Bovine herpesvirus 2 (strain BMV)

Query: 2 ASPMFGDKD 10
ASP FG +D
Sbjct: 320 ASPFFGYRD 328


>sp|YR476_MIMIV|PUTATIVE AAA family ATPase R476|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LASPMFGDKD 10
L S MFGD D
Sbjct: 440 LFSLMFGDDD 449


>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain

Query: 1 LASPMFGDKD 10
L S M GD+D
Sbjct: 288 LVSTMLGDED 297


>sp|GH_EHV2|ENVELOPE glycoprotein H|Equine herpesvirus 2 (strain 86/87)

Query: 3 SPMFGDKD 10
S FGDKD
Sbjct: 213 SVFFGDKD 220




186|Sequence|926|935|FGDKDSLPTN

>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1 FGDKDSLPTN 10
FG K+S+P++
Sbjct: 2270 FGKKNSIPSS 2279


>sp|VF030_IIV3|UNCHARACTERIZED protein 106R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 FGDKDSLPTN 10
FG SLP+N
Sbjct: 259 FGKTKSLPSN 268


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 2 GDKDSLPTN 10
GD DS P N
Sbjct: 354 GDMDSTPAN 362


>sp|CAPSD_BOTVX|CAPSID protein|Botrytis virus X (isolate Botrytis

Query: 3 DKDSLPTN 10
D+D+LPT+
Sbjct: 6 DQDTLPTH 13




187|Sequence|931|940|SLPTNPVEAP

>sp|VG31_BPMD2|GENE 31 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 SLPTNPVEA 9
+ PTNP+EA
Sbjct: 2 TFPTNPLEA 10


>sp|VG31_BPML5|GENE 31 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 SLPTNPVEA 9
+ PTNP+EA
Sbjct: 2 TYPTNPLEA 10


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 SLPTNPVE 8
+LPTNPV+
Sbjct: 1117 TLPTNPVK 1124


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 1 SLPTNPVE 8
+LPTNPV+
Sbjct: 1116 TLPTNPVK 1123


>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)

Query: 4 TNPVEAP 10
TNPVE P
Sbjct: 531 TNPVEIP 537


>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)

Query: 4 TNPVEAP 10
TNPVE P
Sbjct: 531 TNPVEIP 537


>sp|443R_IIV6|UNCHARACTERIZED protein 443R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 SLPTNPVEA 9
SLP NP +A
Sbjct: 746 SLPVNPTDA 754


>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann

Query: 4 TNPVEAP 10
TNP+E P
Sbjct: 531 TNPIEIP 537




188|Sequence|936|945|PVEAPHCSEY

>sp|DPOL_CBEPV|DNA polymerase|Choristoneura biennis entomopoxvirus (CbEPV)

Query: 4 APHCSEY 10
+P+C+EY
Sbjct: 687 SPYCAEY 693


>sp|VP3_CAVC1|APOPTIN anemia virus (isolate Germany

Query: 1 PVEAPHCSE 9
P+E PHC E
Sbjct: 24 PLETPHCRE 32


>sp|VP3_CAV82|APOPTIN anemia virus (isolate Japan

Query: 1 PVEAPHCSE 9
P+E PHC E
Sbjct: 24 PLETPHCRE 32


>sp|VU4_ELHVK|PROTEIN U4|Elephantid herpesvirus 1 (isolate Asian

Query: 1 PVEAPHCSE 9
P+++P C E
Sbjct: 331 PIQSPGCRE 339


>sp|VP3_CAVCI|APOPTIN anemia virus (isolate USA

Query: 1 PVEAPHCSE 9
P+E PHC E
Sbjct: 24 PLETPHCRE 32


>sp|VP3_CAVCA|APOPTIN anemia virus (isolate Australia/CAU269-7/2000)

Query: 1 PVEAPHCSE 9
P+E PHC E
Sbjct: 24 PLETPHCRE 32


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2 VEAPHCSEY 10
+E P CS+Y
Sbjct: 259 IEDPVCSDY 267


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2 VEAPHCSEY 10
+E P CS+Y
Sbjct: 259 IEDPVCSDY 267


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 4 APHCSEY 10
AP C+EY
Sbjct: 304 APMCAEY 310


>sp|TERL_LAMBD|TERMINASE, large subunit|Escherichia phage lambda (Bacteriophage lambda)

Query: 2 VEAPHCSE 9
V PHC E
Sbjct: 238 VACPHCGE 245


>sp|POL_EIAVY|POL polyprotein|Equine infectious anemia virus (strain

Query: 3 EAPHCSE 9
E PHC++
Sbjct: 913 ECPHCTK 919


>sp|POL_EIAVC|POL polyprotein|Equine infectious anemia virus (isolate

Query: 3 EAPHCSE 9
E PHC++
Sbjct: 914 ECPHCTK 920


>sp|VQ3L_SHEVK|G-PROTEIN coupled receptor homolog Q2/3L|Sheeppox virus (strain KS-1)

Query: 2 VEAPHCSE 9
V+ PHC +
Sbjct: 78 VDIPHCDD 85


>sp|POL_EIAV9|POL polyprotein|Equine infectious anemia virus (isolate

Query: 3 EAPHCSE 9
E PHC++
Sbjct: 914 ECPHCTK 920


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 4 APHCSEY 10
AP C+EY
Sbjct: 315 APMCAEY 321


>sp|Y030_NPVOP|UNCHARACTERIZED 52.7 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 VEAPHC 7
+ APHC
Sbjct: 172 INAPHC 177


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 4 APHCSEY 10
AP C+EY
Sbjct: 315 APMCAEY 321


>sp|POLG_SVDVU|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 4 APHCSEY 10
AP C+EY
Sbjct: 315 APMCAEY 321


>sp|POLG_SVDVH|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 4 APHCSEY 10
AP C+EY
Sbjct: 315 APMCAEY 321


>sp|TERL_BPP21|TERMINASE, large subunit|Enterobacteria phage P21 (Bacteriophage 21)

Query: 2 VEAPHCSE 9
V PHC E
Sbjct: 238 VPCPHCGE 245


>sp|ENV_EIAV2|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 3 EAPHCSEY 10
++ HC EY
Sbjct: 171 DSDHCQEY 178


>sp|ENV_EIAV1|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 3 EAPHCSEY 10
++ HC EY
Sbjct: 171 DSDHCQEY 178


>sp|ENV_EIAVC|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 3 EAPHCSEY 10
++ HC EY
Sbjct: 171 DSDHCQEY 178


>sp|ENV_EIAV5|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 3 EAPHCSEY 10
++ HC EY
Sbjct: 171 DSDHCQEY 178


>sp|ENV_EIAVY|ENVELOPE glycoprotein|Equine infectious anemia virus (strain

Query: 3 EAPHCSEY 10
++ HC EY
Sbjct: 171 DSDHCQEY 178


>sp|ENV_EIAVW|ENVELOPE glycoprotein|Equine infectious anemia virus (strain

Query: 3 EAPHCSEY 10
++ HC EY
Sbjct: 171 DSDHCQEY 178


>sp|ENV_EIAV9|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 3 EAPHCSEY 10
++ HC EY
Sbjct: 171 DSDHCQEY 178


>sp|POL2_TORVR|RNA2 polyprotein|Tomato ringspot virus (isolate raspberry)

Query: 1 PVEAPHCS 8
PVE P C+
Sbjct: 474 PVEMPSCA 481


>sp|ENV_EIAV3|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 3 EAPHCSEY 10
++ HC EY
Sbjct: 171 DSDHCQEY 178




189|Sequence|941|950|HCSEYKMQMA

>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 2 CSEYKMQMA 10
CSEY ++MA
Sbjct: 898 CSEYPLKMA 906


>sp|Y023_OSHVF|UNCHARACTERIZED protein ORF23|Ostreid herpesvirus 1 (isolate France)

Query: 1 HCSEYK 6
HC EYK
Sbjct: 766 HCKEYK 771




190|Sequence|946|955|KMQMAVSLRL

***** No hits found ******


191|Sequence|951|960|VSLRLALPPP

>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United

Query: 2 SLRLALPP 9
S+RL LPP
Sbjct: 1089 SIRLGLPP 1096


>sp|TMP_BPMU|PROBABLE tape measure protein|Escherichia phage Mu (Bacteriophage Mu)

Query: 5 LALPPP 10
LALPPP
Sbjct: 472 LALPPP 477


>sp|VP16_EHV4|TEGUMENT protein VP16 homolog|Equine herpesvirus 4 (strain 1942)

Query: 4 RLALPPP 10
RLALPPP
Sbjct: 58 RLALPPP 64


>sp|RIR1_EHV4|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Equine herpesvirus 4 (strain 1942)

Query: 5 LALPPP 10
LALPPP
Sbjct: 463 LALPPP 468


>sp|VP16_EHV1B|TEGUMENT protein VP16 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 4 RLALPPP 10
RLALPPP
Sbjct: 83 RLALPPP 89


>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)

Query: 1 VSLRLALPPP 10
+ LR+A+P P
Sbjct: 571 IGLRIAIPIP 580


>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese

Query: 3 LRLALPPP 10
LRL +PPP
Sbjct: 216 LRLKIPPP 223




192|Sequence|956|965|ALPPPTENSS

>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40

Query: 2 LPPPTENS 9
LPPP+E+S
Sbjct: 20 LPPPSEDS 27


>sp|CAPSD_AQRVG|INNER capsid protein VP3|Aquareovirus G (isolate American grass

Query: 2 LPPPTENS 9
LPPPT+N+
Sbjct: 264 LPPPTDNT 271


>sp|ICP27_ELHVK|MRNA export factor ICP27 homolog|Elephantid herpesvirus 1 (isolate Asian

Query: 4 PPTENSS 10
PPTENSS
Sbjct: 293 PPTENSS 299


>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)

Query: 1 ALPPPTEN 8
ALPPP +N
Sbjct: 433 ALPPPVDN 440


>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)

Query: 1 ALPPPTEN 8
ALPPP +N
Sbjct: 433 ALPPPVDN 440


>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2

Query: 3 PPPTEN 8
PPPT N
Sbjct: 338 PPPTHN 343


>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5

Query: 3 PPPTEN 8
PPPT N
Sbjct: 338 PPPTHN 343


>sp|E1BS_ADES7|E1B protein, small T-antigen|Simian adenovirus serotype 7 (SAdV-7)

Query: 1 ALPPPTEN 8
L PPTEN
Sbjct: 173 GLDPPTEN 180


>sp|CAPSD_AQRVC|INNER capsid protein VP3|Aquareovirus C (isolate Golden

Query: 2 LPPPTENS 9
LPPPT++S
Sbjct: 263 LPPPTDSS 270


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 2 LPPPTENS 9
LPPP+E S
Sbjct: 743 LPPPSEES 750


>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 2 LPPPTENS 9
LPPP+E S
Sbjct: 743 LPPPSEES 750


>sp|SCAF_SHV21|CAPSID scaffolding protein|Saimiriine herpesvirus 2 (strain 11)

Query: 3 PPPTENSS 10
PPPTE +S
Sbjct: 431 PPPTEGAS 438




193|Sequence|961|970|TENSSLSSIT

***** No hits found ******


194|Sequence|966|979|LSSITLLDPGEHYC

>sp|YL143_MIMIV|UNCHARACTERIZED protein L143|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LSSITLLDPG 10
+SSITL DPG
Sbjct: 105 VSSITLGDPG 114


>sp|YR104_MIMIV|PUTATIVE transposase R104|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 ITLLDPGE 11
IT++DPGE
Sbjct: 337 ITVMDPGE 344


>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P

Query: 1 LSSITLLDPGEHYC 14
+SS DP HYC
Sbjct: 282 ISSALRRDPAVHYC 295


>sp|PORTL_BPKMV|PORTAL protein|Pseudomonas phage phiKMV

Query: 7 LDPGEHY 13
L PGEHY
Sbjct: 246 LAPGEHY 252


>sp|V143_NPVOP|ATP-DEPENDENT DNA helicase P143|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 LSSITLLDPGEHY 13
++ +TL+ GEHY
Sbjct: 505 VTQVTLVFNGEHY 517


>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)

Query: 5 TLLDPGEH 12
T LDPG+H
Sbjct: 82 TGLDPGDH 89


>sp|YL720_MIMIV|ENDONUCLEASE 8-like L720|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 SSITLLDP 9
S ITLLDP
Sbjct: 105 SQITLLDP 112


>sp|BC1_TGMVY|MOVEMENT protein BC1|Tomato golden mosaic virus (strain

Query: 5 TLLDPGE 11
T+LDPGE
Sbjct: 241 TILDPGE 247


>sp|YL288_MIMIV|PUTATIVE B-type lectin protein L288|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 SSITLLDPGEHYC 14
S I+ LDP YC
Sbjct: 106 SFISKLDPNGTYC 118


>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27

Query: 1 LSSITLLDPGEH 12
+ S T+ DPG H
Sbjct: 383 IKSTTISDPGSH 394


>sp|MVP_ABMVW|MOVEMENT protein BC1|Abutilon mosaic virus (isolate West

Query: 5 TLLDPGE 11
+LLDPGE
Sbjct: 241 SLLDPGE 247


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 6 LLDPGEHY 13
+LDPGE Y
Sbjct: 1 MLDPGEVY 8


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 6 LLDPGEHY 13
+LDPGE Y
Sbjct: 1 MLDPGEVY 8


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 6 LLDPGEHY 13
+LDPGE Y
Sbjct: 1 MLDPGEVY 8


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 6 LLDPGEHY 13
+LDPGE Y
Sbjct: 1 MLDPGEVY 8


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 6 LLDPGEHY 13
+LDPGE Y
Sbjct: 1 MLDPGEVY 8


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 6 LLDPGEHY 13
+LDPGE Y
Sbjct: 1 MLDPGEVY 8


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 6 LLDPGEHY 13
+LDPGE Y
Sbjct: 1 MLDPGEVY 8


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 6 LLDPGEHY 13
+LDPGE Y
Sbjct: 1 MLDPGEVY 8


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 6 LLDPGEHY 13
+LDPGE Y
Sbjct: 1 MLDPGEVY 8


>sp|YO03_BPL2|UNCHARACTERIZED 37.2 kDa protein|Acholeplasma phage L2 (Bacteriophage L2)

Query: 6 LLDPGEHY 13
L++PG HY
Sbjct: 88 LINPGVHY 95


>sp|POL_SIVMB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate MB66)

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 691 SVTVLDVGDAY 701


>sp|POL_SIVEK|GAG-POL polyprotein|Simian immunodeficiency virus (isolate EK505)

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 701 SVTVLDVGDAY 711


>sp|POL_SIVCZ|GAG-POL polyprotein|Simian immunodeficiency virus (isolate CPZ

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 641 SVTVLDVGDAY 651


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 693 SVTVLDVGDAY 703


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 702 SVTVLDVGDAY 712


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 692 SVTVLDVGDAY 702


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 686 SVTVLDVGDAY 696


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 685 SVTVLDVGDAY 695


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 690 SVTVLDVGDAY 700


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 689 SVTVLDVGDAY 699


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 689 SVTVLDVGDAY 699


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 693 SVTVLDVGDAY 703


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 691 SVTVLDVGDAY 701


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 689 SVTVLDVGDAY 699


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 692 SVTVLDVGDAY 702


>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 693 SVTVLDVGDAY 703


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 687 SVTVLDVGDAY 697


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 698 SVTVLDVGDAY 708


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 697 SVTVLDVGDAY 707


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 691 SVTVLDVGDAY 701


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 692 SVTVLDVGDAY 702


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 696 SVTVLDVGDAY 706


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 692 SVTVLDVGDAY 702


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 696 SVTVLDVGDAY 706


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 692 SVTVLDVGDAY 702


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 704 SVTVLDVGDAY 714


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 692 SVTVLDVGDAY 702


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 704 SVTVLDVGDAY 714


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 704 SVTVLDVGDAY 714


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 691 SVTVLDVGDAY 701


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 694 SVTVLDVGDAY 704


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 692 SVTVLDVGDAY 702


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 687 SVTVLDVGDAY 697


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 687 SVTVLDVGDAY 697


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 687 SVTVLDVGDAY 697


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SITLLDPGEHY 13
S+T+LD G+ Y
Sbjct: 688 SVTVLDVGDAY 698


>sp|H962L_ASFK5|PUTATIVE RNA Helicase B962L|African swine fever virus (isolate

Query: 5 TLLDPGEHY 13
TLL+PG Y
Sbjct: 5 TLLEPGHLY 13


>sp|H962L_ASFB7|PUTATIVE RNA helicase B962L|African swine fever virus (strain

Query: 5 TLLDPGEHY 13
TLL+PG Y
Sbjct: 5 TLLEPGHLY 13


>sp|H962L_ASFP4|PUTATIVE RNA Helicase B962L|African swine fever virus (isolate

Query: 5 TLLDPGEHY 13
TLL+PG Y
Sbjct: 5 TLLEPGHLY 13


>sp|H962L_ASFM2|PUTATIVE RNA Helicase B962L|African swine fever virus (isolate

Query: 5 TLLDPGEHY 13
TLL+PG Y
Sbjct: 5 TLLEPGHLY 13


>sp|H962L_ASFWA|PUTATIVE RNA Helicase B962L|African swine fever virus (isolate

Query: 5 TLLDPGEHY 13
TLL+PG Y
Sbjct: 5 TLLEPGHLY 13


>sp|PIF1_NPVAC|PER os infectivity factor 1|Autographa californica nuclear polyhedrosis

Query: 5 TLLDPGEHYC 14
TL+ GE YC
Sbjct: 105 TLIRAGEAYC 114


>sp|DUTP_ASFK5|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|African swine fever virus

Query: 2 SSITLLDPG 10
+SI L+DPG
Sbjct: 85 NSIGLIDPG 93


>sp|GLYCO_ARV|GLYCOPROTEIN River virus (ARV)

Query: 1 LSSITLLDPGEHYC 14
LS ++ +PG+HY
Sbjct: 336 LSYLSPSNPGKHYA 349


>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)

Query: 1 LSSITLLDPGEHY 13
SIT L+ G+H+
Sbjct: 546 FKSITGLESGKHF 558


>sp|SCP_HHV8P|SMALL capsomere-interacting protein|Human herpesvirus 8 type P

Query: 2 SSITLLDPGEH 12
SSIT L G H
Sbjct: 125 SSITTLSSGPH 135






THE END