OSMR_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|TTQFVAFLAM

>sp|TDXH_STAMF|PEROXIREDOXIN marinus (strain ATCC 43588

Query: 1 TTQFVAF 7
TT+FVAF
Sbjct: 49 TTEFVAF 55


>sp|TDXH_METVS|PEROXIREDOXIN vannielii (strain ATCC 35089

Query: 1 TTQFVAF 7
TT+FVAF
Sbjct: 47 TTEFVAF 53


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 1 TTQFVAF 7
TT+FVAF
Sbjct: 45 TTEFVAF 51


>sp|TDXH_METTH|PEROXIREDOXIN thermautotrophicus (strain ATCC 29096

Query: 1 TTQFVAF 7
TT+FVAF
Sbjct: 45 TTEFVAF 51


>sp|TDXH_METMP|PEROXIREDOXIN maripaludis (strain DSM 14266

Query: 1 TTQFVAF 7
TT+FVAF
Sbjct: 47 TTEFVAF 53


>sp|TDXH_METM5|PEROXIREDOXIN maripaludis (strain C5 /

Query: 1 TTQFVAF 7
TT+FVAF
Sbjct: 47 TTEFVAF 53


>sp|TDXH_IGNH4|PEROXIREDOXIN hospitalis (strain KIN4/I /

Query: 1 TTQFVAF 7
TT+FVAF
Sbjct: 49 TTEFVAF 55


>sp|TDXH_HYPBU|PEROXIREDOXIN butylicus (strain DSM 5456

Query: 1 TTQFVAF 7
TT+FVAF
Sbjct: 49 TTEFVAF 55


>sp|TDXH_ARCFU|PEROXIREDOXIN fulgidus (strain ATCC 49558

Query: 1 TTQFVAF 7
TT+FVAF
Sbjct: 46 TTEFVAF 52


>sp|TDXH_THEVO|PEROXIREDOXIN volcanium (strain ATCC 51530

Query: 1 TTQFVAF 7
TT+F+AF
Sbjct: 45 TTEFIAF 51


>sp|TDXH2_THEAC|PEROXIREDOXIN 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TTQFVAF 7
TT+F+AF
Sbjct: 41 TTEFIAF 47


>sp|TDXH1_SULTO|PEROXIREDOXIN 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TTQFVAF 7
TT+FVAF
Sbjct: 47 TTEFVAF 53




2|SequenceR|15|6|LTLFFTTQFV

>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 TLFFTTQFV 10
TLF T QFV
Sbjct: 262 TLFLTNQFV 270


>sp|MEND_HALWD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 FTTQFV 10
FTTQFV
Sbjct: 542 FTTQFV 547


>sp|CARA_METMA|CARBAMOYL phosphate synthase small chain|Methanosarcina mazei (strain ATCC

Query: 3 LFFTTQF 9
L FTTQF
Sbjct: 28 LVFTTQF 34


>sp|CARA_METAC|CARBAMOYL phosphate synthase small chain|Methanosarcina acetivorans (strain

Query: 3 LFFTTQF 9
L FTTQF
Sbjct: 28 LVFTTQF 34


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 LTLFFT 6
LTLFFT
Sbjct: 614 LTLFFT 619




3|SequenceR|20|11|TRLSLLTLFF

>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TRLSLLTLFF 10
TRL L +LFF
Sbjct: 386 TRLDLWSLFF 395


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 4 SLLTLFF 10
S+LTLFF
Sbjct: 612 SMLTLFF 618


>sp|ARLY_SULTO|ARGININOSUCCINATE lyase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TRLSLLTLFF 10
+ LSLL LFF
Sbjct: 229 SNLSLLMLFF 238




4|SequenceR|25|16|VESQYTRLSL

>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 2 ESQYTRLSL 10
E+QYT+++L
Sbjct: 395 EAQYTKMNL 403




5|SequenceR|30|21|LREALVESQY

>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LREALVESQY 10
LRE ESQY
Sbjct: 920 LREIYPESQY 929




6|SequenceR|35|26|VPTLPLREAL

>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 LPLREAL 10
+PLREAL
Sbjct: 273 IPLREAL 279


>sp|AATD_THEGJ|A-TYPE ATP synthase subunit D|Thermococcus gammatolerans (strain DSM

Query: 3 TLPLREA 9
TLPLREA
Sbjct: 76 TLPLREA 82


>sp|GIN15_SACS2|DNA replication complex GINS protein|Saccharolobus solfataricus (strain

Query: 1 VPTLPLREAL 10
V LP+REAL
Sbjct: 123 VLVLPMREAL 132


>sp|FTSZ2_METJA|CELL division protein FtsZ 2|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VPTLPLREAL 10
VP LP+ +A
Sbjct: 198 VPNLPINDAF 207


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PTLPLREAL 10
P+L +REAL
Sbjct: 329 PSLEVREAL 337


>sp|RL2_HALWD|LARGE ribosomal subunit protein uL2|Haloquadratum walsbyi (strain DSM

Query: 3 TLPLRE 8
TLPLRE
Sbjct: 94 TLPLRE 99


>sp|RL31_HALMA|LARGE ribosomal subunit protein eL31|Haloarcula marismortui (strain

Query: 1 VPTLPLREA 9
V T+PLR+A
Sbjct: 10 VVTIPLRDA 18




7|SequenceR|40|31|SVKLSVPTLP

>sp|MRE11_PYRAB|DNA double-strand break repair protein|Pyrococcus abyssi (strain GE5 /

Query: 1 SVKLSVPTLP 10
+VKL+VP +P
Sbjct: 291 AVKLAVPKIP 300


>sp|CBID_METM6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 SVKLSVPT 8
+VK+SVPT
Sbjct: 151 TVKISVPT 158


>sp|SYTE_SACS2|THREONINE--TRNA ligase editing subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 SVKLSVPTLP 10
SVK PTLP
Sbjct: 261 SVKQQPPTLP 270


>sp|AROD_SACS2|3-DEHYDROQUINATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SVKLSVPTL 9
SVK++VP+L
Sbjct: 138 SVKIAVPSL 146


>sp|KAE1_PYRAR|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum arsenaticum

Query: 1 SVKLSVPTLP 10
++KL VP +P
Sbjct: 96 AIKLGVPIVP 105


>sp|KAE1_PYRCJ|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum calidifontis

Query: 1 SVKLSVPTLP 10
++KL VP +P
Sbjct: 103 AIKLGVPLVP 112


>sp|PANB_HYPBU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 3 KLSVPTL 9
KLS+PT+
Sbjct: 198 KLSIPTI 204


>sp|KAE1_PYRAE|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum aerophilum

Query: 1 SVKLSVPTLP 10
++KL VP +P
Sbjct: 96 AIKLGVPLVP 105




8|SequenceR|45|36|RTSNTSVKLS

***** No hits found ******


9|SequenceR|50|41|LHLSQRTSNT

>sp|NPPNK_METJA|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanocaldococcus jannaschii (strain

Query: 1 LHLSQRTS 8
LHL +RTS
Sbjct: 270 LHLMERTS 277




10|SequenceR|55|46|HVTWQLHLSQ

>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VTWQLHLSQ 10
VTWQ H Q
Sbjct: 154 VTWQFHKLQ 162


>sp|Y096_ARCFU|UNCHARACTERIZED protein AF_0096|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TWQLHLS 9
TW LH+S
Sbjct: 10 TWGLHMS 16


>sp|GLNA_THEKO|GLUTAMINE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 TWQLHL 8
TW+LH+
Sbjct: 137 TWELHI 142




11|SequenceR|60|51|HYPLNHVTWQ

>sp|THIC_SULAC|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HYPLNHVTW 9
H PLN V W
Sbjct: 268 HVPLNEVAW 276


>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HYPLNHVTW 9
H PLN + W
Sbjct: 268 HVPLNEIAW 276


>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 HYPLNHVTW 9
H PLN + W
Sbjct: 268 HVPLNEIAW 276


>sp|THIC_SACI4|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 HYPLNHVTW 9
H PLN + W
Sbjct: 268 HVPLNEIAW 276


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 HYPLNHVTW 9
H PLN + W
Sbjct: 268 HVPLNEIAW 276


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 HYPLNHVTW 9
H PLN + W
Sbjct: 268 HVPLNEIAW 276


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HYPLNHVTW 9
H PLN + W
Sbjct: 268 HVPLNEIAW 276


>sp|THIC1_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HYPLNHVTW 9
H PLN + W
Sbjct: 268 HVPLNEIAW 276


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HYPLNHVTW 9
H PLN V W
Sbjct: 270 HVPLNDVIW 278


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter

Query: 1 HYPLNH 6
HYP NH
Sbjct: 43 HYPENH 48


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter

Query: 1 HYPLNH 6
HYP NH
Sbjct: 43 HYPENH 48


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 2 YPLNHVTWQ 10
YPLN+ T++
Sbjct: 152 YPLNNYTYE 160


>sp|Y1127_METJA|UNCHARACTERIZED protein MJ1127|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HYPLNHVTWQ 10
HYP++ W+
Sbjct: 127 HYPVSEDVWK 136


>sp|KPYK_PYRAE|PYRUVATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 YPLNHVTW 9
YPL V+W
Sbjct: 330 YPLAAVSW 337


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HYPLNHVTW 9
+YP H+ W
Sbjct: 154 NYPGKHIYW 162


>sp|BACR1_HALSS|ARCHAERHODOPSIN-1 sp. (strain SG1)

Query: 1 HYPLNHVTW 9
H PL TW
Sbjct: 141 HTPLARYTW 149


>sp|BACR1_HALEZ|ARCHAERHODOPSIN-1 ezzemoulense (Halorubrum chaoviator)

Query: 1 HYPLNHVTW 9
H PL TW
Sbjct: 141 HTPLARYTW 149


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HYPLNHVTW 9
HY ++ V W
Sbjct: 42 HYEVDEVMW 50


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 2 YPLNHV 7
YP NHV
Sbjct: 698 YPKNHV 703


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM 22066

Query: 1 HYPLNHVT 8
HY + H+T
Sbjct: 279 HYQVQHIT 286


>sp|BACR_HALHM|BACTERIORHODOPSIN halobium (strain mex)

Query: 1 HYPLNHVTW 9
H PL TW
Sbjct: 118 HTPLARYTW 126


>sp|HPCAS_SULTO|3-HYDROXYPROPIONYL-COENZYME A synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PLNHVTWQ 10
PLN+ W+
Sbjct: 391 PLNYAPWK 398




12|SequenceR|65|56|MKLEQHYPLN

>sp|GLPK_HALSA|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 KLEQHYP 8
K EQHYP
Sbjct: 34 KHEQHYP 40


>sp|GLPK_HALS3|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 KLEQHYP 8
K EQHYP
Sbjct: 34 KHEQHYP 40


>sp|MTRE_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 2 KLEQHYPL 9
+L QHYP
Sbjct: 190 RLYQHYPF 197




13|SequenceR|70|61|QIQFVMKLEQ

***** No hits found ******


14|SequenceR|75|66|EIRSIQIQFV

***** No hits found ******


15|SequenceR|80|71|IVNSTEIRSI

>sp|Y1574_METJA|UNCHARACTERIZED ATP-dependent helicase MJ1574|Methanocaldococcus jannaschii (strain

Query: 1 IVNSTEIRSI 10
I N TEIR++
Sbjct: 464 ITNKTEIRNV 473


>sp|BIOB_METVS|BIOTIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VNSTEIRSI 10
+NS EI+SI
Sbjct: 247 INSKEIKSI 255


>sp|CDC6_THEVO|ORC1-TYPE DNA replication protein|Thermoplasma volcanium (strain ATCC 51530

Query: 3 NSTEIRSI 10
N+TEIR I
Sbjct: 206 NATEIRDI 213




16|SequenceR|85|76|YNGVWIVNST

>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 YNGVWIV 7
YNG+WIV
Sbjct: 276 YNGIWIV 282


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 YNGVWIV 7
YNG+WIV
Sbjct: 276 YNGIWIV 282


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YNGVWIV 7
YNG+WI+
Sbjct: 276 YNGIWII 282


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 YNGVWIVN 8
YNG+WIV+
Sbjct: 281 YNGIWIVS 288


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YNGVWIV 7
YNG+WIV
Sbjct: 273 YNGLWIV 279


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 1 YNGVWIVNS 9
++GVWIV++
Sbjct: 204 HDGVWIVDT 212


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 YNGVWIVNST 10
Y GV++VNS+
Sbjct: 441 YRGVFMVNSS 450


>sp|PURO_THEKO|IMP cyclohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 NGVWIVNST 10
NGV+I+N T
Sbjct: 38 NGVYILNQT 46


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 1 YNGVWIVNST 10
YNG IVN T
Sbjct: 545 YNGNMIVNMT 554


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 1 YNGVWIVNST 10
YNG IVN T
Sbjct: 545 YNGNMIVNMT 554


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 1 YNGVWIVNST 10
YNG IVN T
Sbjct: 545 YNGNMIVNMT 554


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 1 YNGVWIVNST 10
YNG IVN T
Sbjct: 545 YNGNMIVNMT 554


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 1 YNGVWIVNST 10
YNG IVN T
Sbjct: 545 YNGNMIVNMT 554


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NGVWIV 7
NG+WI+
Sbjct: 262 NGIWIM 267


>sp|PYLS_METBU|PYRROLYSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 NGVWIVNS 9
NGVW+ S
Sbjct: 13 NGVWLSRS 20


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 YNGVWIVNS 9
YN W++N+
Sbjct: 151 YNSTWVINA 159


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 YNGVWIVN 8
+ G W+VN
Sbjct: 187 FKGKWVVN 194


>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 YNGVWIVNS 9
Y GV +VNS
Sbjct: 572 YRGVQLVNS 580


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YNGVWIVNS 9
Y GV +VNS
Sbjct: 563 YRGVQLVNS 571


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 YNGVWIVNS 9
Y GV +VNS
Sbjct: 569 YRGVQLVNS 577


>sp|SYTC_SULTO|THREONINE--TRNA ligase catalytic subunit|Sulfurisphaera tokodaii (strain DSM

Query: 1 YNGVWI 6
Y GVW+
Sbjct: 4 YKGVWL 9


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YNGVWI 6
Y G+W+
Sbjct: 310 YKGIWV 315


>sp|ASSY_PYRFU|ARGININOSUCCINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YNGVW 5
YNG+W
Sbjct: 306 YNGLW 310


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 WIVNST 10
WIVN T
Sbjct: 805 WIVNKT 810


>sp|NADM_METAC|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YNGVWI 6
YN +W+
Sbjct: 78 YNSIWV 83


>sp|PYRF_HALSA|OROTIDINE 5'-phosphate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 2 NGVWIVNST 10
+GV +VNST
Sbjct: 227 DGVGLVNST 235


>sp|PYRF_HALS3|OROTIDINE 5'-phosphate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 2 NGVWIVNST 10
+GV +VNST
Sbjct: 227 DGVGLVNST 235


>sp|NADM_METMP|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YNGVWI 6
YN VW+
Sbjct: 77 YNAVWV 82


>sp|NADM_METM7|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 YNGVWI 6
YN VW+
Sbjct: 77 YNAVWV 82


>sp|NADM_METMA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YNGVWI 6
YN +W+
Sbjct: 78 YNSIWV 83


>sp|DP2S_METTH|DNA polymerase II small subunit|Methanothermobacter thermautotrophicus

Query: 1 YNGVWIVNS 9
Y GV ++NS
Sbjct: 438 YKGVHLINS 446


>sp|NADM_METM5|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 YNGVWI 6
YN VW+
Sbjct: 77 YNAVWV 82


>sp|NADM_METM6|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 YNGVWI 6
YN VW+
Sbjct: 77 YNAVWV 82


>sp|YPV5B_METTF|UNCHARACTERIZED protein ORF5B|Methanothermobacter thermautotrophicus

Query: 2 NGVWIV 7
NGVW++
Sbjct: 274 NGVWVI 279


>sp|YPZ5_METTF|UNCHARACTERIZED protein ORF5'|Methanothermobacter thermautotrophicus

Query: 2 NGVWIV 7
NGVW++
Sbjct: 322 NGVWVI 327


>sp|ASSY_THEVO|ARGININOSUCCINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YNGVW 5
YNG+W
Sbjct: 305 YNGLW 309




17|SequenceR|90|81|KVTTSYNGVW

>sp|FEN_METJA|FLAP endonuclease 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVTTSYNGVW 10
++T++YNGV+
Sbjct: 53 EITSAYNGVF 62


>sp|SPEE2_HYPBU|POLYAMINE aminopropyltransferase 2|Hyperthermus butylicus (strain DSM 5456

Query: 5 SYNGVW 10
SYNG+W
Sbjct: 230 SYNGLW 235


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KVTTSYNGVW 10
+++ YNG+W
Sbjct: 276 EISLKYNGIW 285


>sp|Y642_METMP|UPF0285 protein MMP0642|Methanococcus maripaludis (strain DSM 14266

Query: 1 KVTTSYNGV 9
KVT SY GV
Sbjct: 214 KVTDSYKGV 222


>sp|Y962_METM5|UPF0285 protein MmarC5_0962|Methanococcus maripaludis (strain C5 /

Query: 1 KVTTSYNGV 9
KVT SY GV
Sbjct: 214 KVTESYKGV 222


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VTTSYNGVW 10
V YNG+W
Sbjct: 272 VDLKYNGIW 280


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 VTTSYNGVW 10
V YNG+W
Sbjct: 272 VDLKYNGIW 280


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 VTTSYNGVW 10
V YNG+W
Sbjct: 272 VELKYNGIW 280


>sp|FEN_PYRFU|FLAP endonuclease 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VTTSYNGVW 10
VT +YN VW
Sbjct: 284 VTDNYNLVW 292


>sp|Y247_METM6|UPF0285 protein MmarC6_0247|Methanococcus maripaludis (strain C6 /

Query: 1 KVTTSYNGV 9
KVT SY GV
Sbjct: 214 KVTDSYKGV 222


>sp|Y1551_METVS|UPF0285 protein Mevan_1551|Methanococcus vannielii (strain ATCC 35089

Query: 1 KVTTSYNGV 9
K+T SY GV
Sbjct: 214 KITDSYKGV 222


>sp|PRIS_METAR|DNA primase small subunit PriS|Methanocella arvoryzae (strain DSM 22066

Query: 3 TTSYNGVW 10
TTS GVW
Sbjct: 198 TTSVAGVW 205


>sp|Y1666_METM7|UPF0285 protein MmarC7_1666|Methanococcus maripaludis (strain C7 /

Query: 1 KVTTSYNGV 9
K+T SY GV
Sbjct: 214 KITDSYKGV 222


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VTTSYNGVW 10
V YNG+W
Sbjct: 269 VDLKYNGLW 277


>sp|ASSY_METST|ARGININOSUCCINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 6 YNGVW 10
YNG+W
Sbjct: 307 YNGLW 311


>sp|ASSY_THEVO|ARGININOSUCCINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 6 YNGVW 10
YNG+W
Sbjct: 305 YNGLW 309


>sp|MOAC_HALSA|PROBABLE cyclic pyranopterin monophosphate synthase|Halobacterium salinarum

Query: 2 VTTSYNGVW 10
VTT N VW
Sbjct: 122 VTTGLNVVW 130


>sp|MOAC_HALS3|PROBABLE cyclic pyranopterin monophosphate synthase|Halobacterium salinarum

Query: 2 VTTSYNGVW 10
VTT N VW
Sbjct: 122 VTTGLNVVW 130


>sp|ASSY_PYRFU|ARGININOSUCCINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 6 YNGVW 10
YNG+W
Sbjct: 306 YNGLW 310


>sp|Y1577_METJA|UNCHARACTERIZED protein MJ1577|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VTTSYNGV 9
+TTS+NG+
Sbjct: 24 LTTSFNGM 31




18|SequenceR|95|86|LVQNWKVTTS

>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 1 LVQNWKVT 8
L++NW+VT
Sbjct: 280 LIRNWRVT 287


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VQNWKV 7
V+NWKV
Sbjct: 465 VENWKV 470


>sp|MTRA_METST|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosphaera stadtmanae (strain

Query: 1 LVQNWKVTT 9
++QNW + T
Sbjct: 7 VIQNWPLET 15




19|SequenceR|100|91|EWSWHLVQNW

>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 EWSWHLVQ 8
EW W LVQ
Sbjct: 325 EWLWELVQ 332


>sp|SPEE_SULAC|POLYAMINE aminopropyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 EWSWHL 6
EW+WHL
Sbjct: 3 EWTWHL 8


>sp|G1PDH_CENSY|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Cenarchaeum symbiosum (strain A)

Query: 1 EWSWHL 6
+WSWH+
Sbjct: 68 KWSWHM 73


>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain ATCC

Query: 1 EWSWHLV 7
EW W LV
Sbjct: 674 EWEWRLV 680


>sp|SPEE_SULTO|POLYAMINE aminopropyltransferase|Sulfurisphaera tokodaii (strain DSM

Query: 1 EWSWHL 6
EW WH+
Sbjct: 3 EWHWHI 8


>sp|PGP_THEVO|PHOSPHOGLYCOLATE phosphatase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 WSWHLV 7
+SWHL+
Sbjct: 140 YSWHLM 145


>sp|PGP_THEAC|PHOSPHOGLYCOLATE phosphatase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WSWHLV 7
+SWHL+
Sbjct: 140 YSWHLM 145


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 WHLVQNW 10
W LV+ W
Sbjct: 5 WELVEPW 11


>sp|SYS_THEON|SERINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 WSWH--LVQN 9
W WH L+QN
Sbjct: 317 WEWHEKLIQN 326


>sp|RL30_PYRAE|LARGE ribosomal subunit protein uL30|Pyrobaculum aerophilum (strain ATCC

Query: 1 EWSWH 5
+W WH
Sbjct: 96 KWGWH 100


>sp|RL15E_ARCFU|LARGE ribosomal subunit protein eL15|Archaeoglobus fulgidus (strain

Query: 1 EWSWHLVQNW 10
E WH +Q W
Sbjct: 22 ELMWHRLQKW 31




20|SequenceR|105|96|LPLESEWSWH

>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 PLESEWSWH 10
PLE+E WH
Sbjct: 423 PLEAELPWH 431


>sp|SPEE_SULAC|POLYAMINE aminopropyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 6 EWSWH 10
EW+WH
Sbjct: 3 EWTWH 7


>sp|Y2543_HALSA|PROTEIN VNG_2543C|Halobacterium salinarum (strain ATCC 700922

Query: 1 LPLESEWS 8
LP+E++WS
Sbjct: 154 LPVENDWS 161


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC

Query: 1 LPLESEWSWH 10
L E+EWS H
Sbjct: 25 LIFEAEWSEH 34


>sp|TIAS_METKA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanopyrus kandleri (strain

Query: 1 LPLESEWS 8
LP+E+ WS
Sbjct: 60 LPVEAPWS 67


>sp|NNRE_NITMS|NAD(P)H-HYDRATE epimerase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 ESEWSW 9
ES W+W
Sbjct: 91 ESNWNW 96


>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 1 LPLESEWS 8
LPL EWS
Sbjct: 413 LPLSLEWS 420


>sp|GCH3_SACI6|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PLESEWS 8
PLE++W+
Sbjct: 93 PLEAQWN 99


>sp|GCH3_SACI4|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PLESEWS 8
PLE++W+
Sbjct: 93 PLEAQWN 99


>sp|GCH3_SACI3|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.27)

Query: 2 PLESEWS 8
PLE++W+
Sbjct: 93 PLEAQWN 99


>sp|ADEC_CENSY|ADENINE deaminase|Cenarchaeum symbiosum (strain A)

Query: 3 LESEWSWH 10
L S WS+H
Sbjct: 467 LASSWSFH 474


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LPLESEWSWH 10
LP ES W WH
Sbjct: 307 LPEES-WKWH 315


>sp|SYS_PYRIL|SERINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 ESEWSWH 10
E W WH
Sbjct: 308 EDSWRWH 314


>sp|IF2A_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LPLESEW 7
+PLE+EW
Sbjct: 127 VPLENEW 133


>sp|GCH3_SACI2|GTP cyclohydrolase III|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PLESEWS 8
PLE++W+
Sbjct: 93 PLEAQWN 99


>sp|GCH3_SACI1|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PLESEWS 8
PLE++W+
Sbjct: 93 PLEAQWN 99


>sp|GCH3_SACI7|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PLESEWS 8
PLE++W+
Sbjct: 93 PLEAQWN 99


>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 ESEWSWH 10
E W WH
Sbjct: 307 EDSWKWH 313


>sp|GCH3_SACS2|GTP cyclohydrolase III|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PLESEWS 8
PLE++W+
Sbjct: 93 PLEAQWN 99


>sp|SYS_PYRAE|SERINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 ESEWSWH 10
E W WH
Sbjct: 309 EDSWKWH 315


>sp|PYLS_METMA|PYRROLYSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LPLESEW 7
+PL+ EW
Sbjct: 405 IPLDREW 411


>sp|IF2A_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 LPLESEW 7
+PLE EW
Sbjct: 127 VPLEEEW 133


>sp|IF2A_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 LPLESEW 7
+PLE EW
Sbjct: 127 VPLEEEW 133


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 ESEWSWH 10
E W WH
Sbjct: 311 EQSWEWH 317


>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 ESEWSWH 10
E W WH
Sbjct: 314 EESWEWH 320


>sp|SYS_THESM|SERINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 4 ESEWSWH 10
E W WH
Sbjct: 314 EESWEWH 320


>sp|SYS_THEKO|SERINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 ESEWSWH 10
E W WH
Sbjct: 314 EESWEWH 320


>sp|PYLS_METBU|PYRROLYSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LPLESEW 7
+PL+ EW
Sbjct: 367 IPLDREW 373


>sp|SYS_THEON|SERINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 4 ESEWSWH 10
E W WH
Sbjct: 314 EESWEWH 320


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 ESEWSWH 10
E W WH
Sbjct: 314 EESWEWH 320


>sp|SPEE_SULTO|POLYAMINE aminopropyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 6 EWSWH 10
EW WH
Sbjct: 3 EWHWH 7


>sp|SYS_THEGJ|SERINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 ESEWSWH 10
E W WH
Sbjct: 314 EESWEWH 320


>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain ATCC

Query: 5 SEWSW 9
SEW W
Sbjct: 673 SEWEW 677


>sp|ASSY_PYRFU|ARGININOSUCCINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LESEWSW 9
++S+WSW
Sbjct: 297 VDSKWSW 303


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 ESEWSWH 10
E W WH
Sbjct: 314 EESWEWH 320




21|SequenceR|110|101|HTACELPLES

>sp|SPSS1_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanoregula boonei (strain DSM 21154

Query: 3 ACELPLES 10
ACE+P +S
Sbjct: 124 ACEIPADS 131


>sp|SYFA_METBF|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 HTACELPLE 9
++ CELP E
Sbjct: 288 NSTCELPTE 296


>sp|Y779_METS3|UPF0173 metal-dependent hydrolase Msm_0779|Methanobrevibacter smithii

Query: 3 ACELPLE 9
AC++P+E
Sbjct: 32 ACQIPVE 38


>sp|Y094_METJA|UNCHARACTERIZED protein MJ0094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HTACEL 6
HTAC++
Sbjct: 91 HTACDI 96




22|SequenceR|115|106|KIRVFHTACE

>sp|FOLD_METTP|BIFUNCTIONAL protein FolD|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 IRVFHTACE 10
IR+ H ACE
Sbjct: 44 IRIKHAACE 52


>sp|TRUB_THEVO|PROBABLE tRNA pseudouridine synthase B|Thermoplasma volcanium (strain ATCC

Query: 1 KIRVFHTACE 10
KI +FH CE
Sbjct: 129 KIVLFHVKCE 138


>sp|HISX_METAC|HISTIDINOL dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IRVFHTA 8
IRVFH A
Sbjct: 93 IRVFHEA 99


>sp|MRE11_METMA|DNA double-strand break repair protein|Methanosarcina mazei (strain

Query: 1 KIRVFHTA 8
+IR+ HTA
Sbjct: 4 EIRILHTA 11


>sp|MRE11_METAC|DNA double-strand break repair protein|Methanosarcina acetivorans

Query: 1 KIRVFHTA 8
+IR+ HTA
Sbjct: 4 EIRILHTA 11


>sp|Y799_METJA|UNCHARACTERIZED protein MJ0799|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KIRVFHTACE 10
K + HTAC+
Sbjct: 68 KTALIHTACD 77


>sp|THIRX_METJA|THIOREDOXIN jannaschii (strain ATCC 43067

Query: 2 IRVFHTAC 9
IR+F T C
Sbjct: 8 IRIFGTGC 15




23|SequenceR|120|111|DDVLSKIRVF

>sp|HEM1_CALMQ|GLUTAMYL-TRNA reductase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DDVLSKIRVF 10
DD LSKIR
Sbjct: 4 DDYLSKIRAL 13


>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 1 DDVLSKIRV 9
DDV+ +IRV
Sbjct: 33 DDVIERIRV 41


>sp|Y675_METJA|UNCHARACTERIZED protein MJ0675|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DDVLSKIRVF 10
+D+L+K+RV+
Sbjct: 128 EDILNKVRVW 137


>sp|MPTA_KORCO|GTP cyclohydrolase MptA|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DDVLSKIRV 9
D++++KIRV
Sbjct: 130 DEIINKIRV 138


>sp|Y086_METJA|UNCHARACTERIZED protein MJ0086|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DDVLSKIRVF 10
D+V SK R+F
Sbjct: 18 DEVYSKARIF 27


>sp|FAEHP_METAC|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DVLSKIR 8
DV+SKIR
Sbjct: 215 DVISKIR 221


>sp|FAEHP_METMA|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DVLSKIR 8
DV+SKIR
Sbjct: 215 DVISKIR 221


>sp|HTR1_HALMA|SENSORY rhodopsin I transducer|Haloarcula marismortui (strain ATCC 43049

Query: 1 DDVLSKIRVF 10
DD+ S++R+F
Sbjct: 495 DDLESRVRLF 504


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 DDVLSKI 7
DD++SKI
Sbjct: 374 DDIISKI 380




24|SequenceR|125|116|EPFKADDVLS

>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 1 EPFKADDV 8
EPF+ DD+
Sbjct: 400 EPFRDDDI 407


>sp|PYRB_AERPE|ASPARTATE carbamoyltransferase catalytic subunit|Aeropyrum pernix (strain

Query: 2 PFKADDVLS 10
PFK DV+S
Sbjct: 5 PFKGRDVIS 13


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 3 FKADDV 8
FKADDV
Sbjct: 173 FKADDV 178




25|SequenceR|130|121|SWFNPEPFKA

>sp|RL19E_HALMA|LARGE ribosomal subunit protein eL19|Haloarcula marismortui (strain

Query: 2 WFNPE 6
WFNPE
Sbjct: 23 WFNPE 27


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 WFNPEPFK 9
W NPE FK
Sbjct: 54 WENPEDFK 61


>sp|Y942_SACS2|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 3 FNPEPFKA 10
F+PE FKA
Sbjct: 199 FSPENFKA 206


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 4 NPEPFKA 10
NPE FKA
Sbjct: 183 NPEKFKA 189


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 NPEPFKA 10
NPE FKA
Sbjct: 183 NPEKFKA 189


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 NPEPFKA 10
NPE FKA
Sbjct: 183 NPEKFKA 189


>sp|DPH2_PYRHO|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SWFNPEPF 8
SW +PE F
Sbjct: 207 SWIDPERF 214


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 PEPFKA 10
P+PFKA
Sbjct: 605 PDPFKA 610


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 5 PEPFKA 10
P+PFKA
Sbjct: 605 PDPFKA 610


>sp|DNLI_CENSY|DNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 WFNPE 6
WF+PE
Sbjct: 512 WFDPE 516


>sp|GPMI_HALSA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Halobacterium salinarum (strain ATCC 700922

Query: 3 FNPEPF 8
FNP PF
Sbjct: 458 FNPVPF 463


>sp|GGR3_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 3|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SWFNPEPFK 9
+WF PE +
Sbjct: 84 AWFTPETLE 92


>sp|Y1579_SACI1|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 3 FNPEPFKA 10
F+PE FK+
Sbjct: 199 FSPESFKS 206


>sp|Y1371_SACI2|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 3 FNPEPFKA 10
F+PE FK+
Sbjct: 199 FSPESFKS 206


>sp|Y1334_SACI3|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 3 FNPEPFKA 10
F+PE FK+
Sbjct: 199 FSPESFKS 206


>sp|Y1284_SACI4|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 3 FNPEPFKA 10
F+PE FK+
Sbjct: 199 FSPESFKS 206


>sp|Y1269_SACI7|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 3 FNPEPFKA 10
F+PE FK+
Sbjct: 199 FSPESFKS 206


>sp|Y1268_SACI6|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 3 FNPEPFKA 10
F+PE FK+
Sbjct: 199 FSPESFKS 206


>sp|ACDG_METKA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanopyrus

Query: 1 SWFNPEP 7
S+FNP P
Sbjct: 88 SFFNPPP 94


>sp|AROC_PYRCJ|CHORISMATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 SWFNPEP 7
+WF P P
Sbjct: 296 AWFKPTP 302


>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 SWFNPEP 7
+WF P P
Sbjct: 296 AWFKPTP 302


>sp|SYH_NATPD|HISTIDINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 WFNPEPF 8
WF+ PF
Sbjct: 99 WFSTRPF 105


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 3 FNPEPFK 9
F PEP K
Sbjct: 127 FKPEPLK 133


>sp|ENCP1_PYRFU|FERRITIN-LIKE-ENCAPSULIN shell fusion protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SWFNPE 6
SW NPE
Sbjct: 221 SWDNPE 226


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 2 WFNPEPFK 9
W+ PE K
Sbjct: 363 WYKPEEIK 370


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 WFNPE 6
WFNPE
Sbjct: 280 WFNPE 284


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SWFNPEPFKA 10
SW P PFK
Sbjct: 235 SWGVPAPFKG 244


>sp|AROC_PYRIL|CHORISMATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 WFNPEP 7
WF P P
Sbjct: 297 WFKPTP 302


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 WFNPEP 7
WF P P
Sbjct: 297 WFKPTP 302


>sp|ASNH2_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing] 2|Methanocaldococcus

Query: 1 SWFNPEPF 8
SW EPF
Sbjct: 347 SWIYDEPF 354


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 1 SWFNPEPF 8
S+FNP P
Sbjct: 93 SFFNPTPI 100




26|SequenceR|135|126|WSSWNSWFNP

>sp|Y36K_HALSN|UNCHARACTERIZED 36 kDa protein|Halobacterium sp. (strain GN101)

Query: 1 WSSWNSWFNP 10
W++ WF P
Sbjct: 260 WATGTQWFRP 269


>sp|SYY_THESM|TYROSINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 SSWNSWFN 9
+ W+SW N
Sbjct: 73 ADWHSWIN 80


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 SSWNSWFN 9
+ W+SW N
Sbjct: 73 ADWHSWIN 80


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SSWNSWFN 9
+ W+SW N
Sbjct: 73 ADWHSWIN 80


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SSWNSWFN 9
+ W+SW N
Sbjct: 73 ADWHSWIN 80


>sp|SYY_PYRFU|TYROSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SSWNSWFN 9
+ W+SW N
Sbjct: 73 ADWHSWIN 80


>sp|SYY_PYRAB|TYROSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 SSWNSWFN 9
+ W+SW N
Sbjct: 73 ADWHSWIN 80


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 SSWNSWFN 9
+ W+SW N
Sbjct: 73 ADWHSWIN 80


>sp|Y35K_HALSI|UNCHARACTERIZED 36 kDa protein|Halobacterium salinarum (Halobacterium halobium)

Query: 1 WSSWNSWFNP 10
W+S WF P
Sbjct: 248 WASGRQWFRP 257


>sp|RGYRB_NANEQ|REVERSE gyrse subunit B|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 WSSWNSWF 8
WS+ +WF
Sbjct: 80 WSAQRAWF 87


>sp|PYRC_AERPE|DIHYDROOROTASE pernix (strain ATCC 700893

Query: 2 SSWNSWFNP 10
S+W W +P
Sbjct: 298 STWEKWMHP 306


>sp|SYY_SULTO|TYROSINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SSWNSWFN 9
++W++W N
Sbjct: 76 ATWHAWIN 83


>sp|SYY_SACI7|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 SSWNSWFN 9
++W++W N
Sbjct: 71 ATWHAWIN 78


>sp|SYY_SACI6|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 SSWNSWFN 9
++W++W N
Sbjct: 71 ATWHAWIN 78


>sp|SYY_SACI4|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 SSWNSWFN 9
++W++W N
Sbjct: 71 ATWHAWIN 78


>sp|SYY_SACI3|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 SSWNSWFN 9
++W++W N
Sbjct: 71 ATWHAWIN 78


>sp|SYY_SACI2|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 SSWNSWFN 9
++W++W N
Sbjct: 71 ATWHAWIN 78


>sp|SYY_SACI1|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 SSWNSWFN 9
++W++W N
Sbjct: 71 ATWHAWIN 78


>sp|Y658_METJA|UNCHARACTERIZED protein MJ0658|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WNSWFNP 10
W S FNP
Sbjct: 46 WQSKFNP 52


>sp|SYY_SACS2|TYROSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SSWNSWFN 9
++W++W N
Sbjct: 76 AAWHAWIN 83


>sp|SYY2_PYRAE|TYROSINE--TRNA ligase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 SSWNSWFN 9
++W++W N
Sbjct: 61 ATWHAWIN 68


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 1 WSSWNSWFNP 10
WS+ +W P
Sbjct: 432 WSALRAWLIP 441


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WSSWNSWFNP 10
WS+ +W P
Sbjct: 434 WSALRNWLIP 443


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 3 SWNSWFNP 10
+W+S+F+P
Sbjct: 252 AWSSFFSP 259


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 1 WSSWNSWF 8
W+ SWF
Sbjct: 451 WNKLRSWF 458


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WSSWNSWFNP 10
WS+ +W P
Sbjct: 428 WSALRNWLLP 437


>sp|SYP_CALMQ|PROLINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 WSSWNSWFN 9
W S+ WFN
Sbjct: 13 WVSFIEWFN 21


>sp|PGMI_AERPE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Aeropyrum pernix (strain

Query: 3 SWNSWFN 9
SW WF+
Sbjct: 7 SWPKWFS 13


>sp|GLNA_ARCFU|GLUTAMINE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SWNSWFNP 10
SW+ W +P
Sbjct: 158 SWDMWVSP 165


>sp|GLNA2_HALMT|GAMMA-GLUTAMYLPUTRESCINE synthetase|Haloferax mediterranei (strain ATCC 33500

Query: 1 WSSWNSWFNP 10
W+ N +F+P
Sbjct: 251 WNGENQFFDP 260


>sp|PGK_METMP|PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 SSWNSW 7
S W SW
Sbjct: 125 SDWKSW 130


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 WSSWNSWF 8
WS W +F
Sbjct: 306 WSFWGDFF 313


>sp|PTH_METS5|PEPTIDYL-TRNA hydrolase|Metallosphaera sedula (strain ATCC 51363

Query: 2 SSWNSWFN 9
SSW W +
Sbjct: 37 SSWRDWLD 44


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 NSWFNP 10
N+W NP
Sbjct: 246 NAWVNP 251


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 5 NSWFNP 10
N+W NP
Sbjct: 246 NAWVNP 251


>sp|CEDA_SULAC|DNA import protein CedA|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WSSWNSWFN 9
W + SW N
Sbjct: 74 WDGYFSWLN 82


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 5 NSWFNP 10
N+W NP
Sbjct: 246 NAWVNP 251


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 5 NSWFNP 10
N+W NP
Sbjct: 243 NAWVNP 248


>sp|PTH_SACI7|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 SSWNSWFN 9
S W W N
Sbjct: 40 SRWKEWLN 47


>sp|PTH_SACI6|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 SSWNSWFN 9
S W W N
Sbjct: 40 SRWKEWLN 47


>sp|PTH_SACI4|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 SSWNSWFN 9
S W W N
Sbjct: 40 SRWKEWLN 47


>sp|PTH_SACI3|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 SSWNSWFN 9
S W W N
Sbjct: 40 SRWKEWLN 47


>sp|PTH_SACI2|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 SSWNSWFN 9
S W W N
Sbjct: 40 SRWKEWLN 47


>sp|PTH_SACI1|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 SSWNSWFN 9
S W W N
Sbjct: 40 SRWKEWLN 47


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 NSWFNP 10
N+W NP
Sbjct: 249 NAWINP 254




27|SequenceR|140|131|VSVEEWSSWN

>sp|RL30_CALMQ|LARGE ribosomal subunit protein uL30|Caldivirga maquilingensis (strain

Query: 2 SVEEWSSW 9
SVE W++W
Sbjct: 63 SVESWATW 70


>sp|Y978_PYRFU|UPF0252 protein PF0978|Pyrococcus furiosus (strain ATCC 43587

Query: 4 EEWSSWN 10
EEW+ WN
Sbjct: 67 EEWTIWN 73


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea

Query: 2 SVEEWSSWN 10
+ E+W WN
Sbjct: 63 AAEDWGHWN 71


>sp|PGP_PYRAB|PHOSPHOGLYCOLATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 4 EEWSSWN 10
EEW WN
Sbjct: 85 EEWILWN 91


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SVEEWSS 8
SVEEW S
Sbjct: 7 SVEEWVS 13


>sp|PGP_PYRHO|PHOSPHOGLYCOLATE phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 EEWSSWN 10
EEW WN
Sbjct: 85 EEWILWN 91


>sp|TRM56_HALWD|TRNA (cytidine(56)-2'-O)-methyltransferase|Haloquadratum walsbyi (strain

Query: 3 VEEWSSWN 10
V EW+ WN
Sbjct: 123 VYEWADWN 130


>sp|COBQ_THEGJ|PROBABLE cobyric acid synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VSVEEWS 7
VS+E WS
Sbjct: 450 VSIERWS 456


>sp|PELO_METTH|PROTEIN pelota homolog|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VSVEEWSSW 9
+ E WS W
Sbjct: 112 IQKEHWSRW 120


>sp|RNH2_THEPD|RIBONUCLEASE HII|Thermofilum pendens (strain DSM 2475

Query: 1 VSVEEWSSW 9
++ +EW++W
Sbjct: 201 IARKEWATW 209


>sp|Y565_METJA|UNCHARACTERIZED protein MJ0565|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EEWSSW 9
E+W+ W
Sbjct: 111 EDWADW 116


>sp|PELO_METS3|PROTEIN pelota homolog|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VSVEEWSSW 9
+ E+W++W
Sbjct: 112 IKKEKWANW 120


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 SVEEWSSWN 10
++EEW S N
Sbjct: 257 TIEEWISEN 265


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 EEWSSW 9
EEW SW
Sbjct: 276 EEWKSW 281


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 2 SVEEWSSWN 10
++EEW S N
Sbjct: 257 TIEEWISEN 265


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 2 SVEEWSSWN 10
++EEW S N
Sbjct: 257 TIEEWISEN 265


>sp|AATC_ARCFU|A-TYPE ATP synthase subunit C|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VEEWSSWN 10
+E+W WN
Sbjct: 101 LEKWDVWN 108


>sp|QOX1_SULAC|QUINOL oxidase subunit 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 EEWSSWN 10
E+W+ WN
Sbjct: 264 EKWARWN 270


>sp|Y672_PYRHO|UPF0252 protein PH0672|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 EWSSWN 10
EW WN
Sbjct: 63 EWKIWN 68


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 VSVEEWS 7
+ VEEWS
Sbjct: 1244 IRVEEWS 1250


>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain

Query: 3 VEEWSSW 9
VE+W W
Sbjct: 30 VEKWLGW 36




28|SequenceR|145|136|GTSDQVSVEE

>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GTSDQVSVEE 10
G +D+VSVEE
Sbjct: 211 GDTDKVSVEE 220


>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TSDQVSVEE 10
TSD+V VEE
Sbjct: 341 TSDRVFVEE 349


>sp|PURT_METAR|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocella arvoryzae

Query: 1 GTSDQVSVEE 10
G+SD++ VEE
Sbjct: 189 GSSDKIIVEE 198


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GTSDQVSVEE 10
G +D+V++EE
Sbjct: 211 GDTDKVTIEE 220


>sp|MTNA_SULAC|PUTATIVE methylthioribose-1-phosphate isomerase|Sulfolobus acidocaldarius

Query: 2 TSDQVSVEE 10
T DQV +EE
Sbjct: 301 TVDQVKIEE 309




29|SequenceR|150|141|FLIDQGTSDQ

>sp|PYRH_METB6|URIDYLATE kinase|Methanoregula boonei (strain DSM 21154

Query: 3 IDQGTSDQ 10
ID+GTSD+
Sbjct: 60 IDEGTSDE 67


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LIDQGTSDQ 10
L+D+GT+D+
Sbjct: 546 LLDRGTADE 554


>sp|MFNA_METMJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoculleus marisnigri

Query: 1 FLIDQGTSD 9
FL+D G +D
Sbjct: 356 FLVDMGDTD 364


>sp|KADA_METMJ|ADENYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FLIDQGTSD 9
FL++QG D
Sbjct: 178 FLLEQGIDD 186




30|SequenceR|155|146|DKPFVFLIDQ

>sp|G6PI_THELI|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus litoralis

Query: 1 DKPFVFL 7
DKPF+FL
Sbjct: 144 DKPFIFL 150


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 KPFVFLIDQ 10
+PF+FL D+
Sbjct: 193 EPFIFLADE 201


>sp|RS4E_METVS|SMALL ribosomal subunit protein eS4|Methanococcus vannielii (strain ATCC

Query: 2 KPFVFLIDQ 10
KP+VF++ Q
Sbjct: 229 KPYVFIVGQ 237


>sp|RS4E_METVA|SMALL ribosomal subunit protein eS4|Methanococcus vannielii

Query: 2 KPFVFLIDQ 10
KP+VF++ Q
Sbjct: 229 KPYVFIVGQ 237


>sp|Y2246_METAC|UNCHARACTERIZED serpin-like protein MA_2246|Methanosarcina acetivorans (strain ATCC

Query: 1 DKPFVFLID 9
D PF+F+I+
Sbjct: 396 DHPFLFMIE 404


>sp|RS4E_METM7|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain C7

Query: 2 KPFVFLIDQ 10
KP+VF++ Q
Sbjct: 229 KPYVFIVGQ 237


>sp|RS4E_METM5|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain C5

Query: 2 KPFVFLIDQ 10
KP+VF++ Q
Sbjct: 229 KPYVFIVGQ 237


>sp|RS4E_METMP|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain DSM

Query: 2 KPFVFLIDQ 10
KP+VF++ Q
Sbjct: 229 KPYVFIVGQ 237


>sp|RS4E_METM6|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain C6

Query: 2 KPFVFLIDQ 10
KP+VF++ Q
Sbjct: 229 KPYVFIVGQ 237


>sp|G6PI_PYRHO|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DKPFVFL 7
D+PF+FL
Sbjct: 143 DEPFIFL 149


>sp|GPI_THEON|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus onnurineus (strain NA1)

Query: 1 DKPFVFL 7
D+PF+FL
Sbjct: 143 DEPFIFL 149


>sp|G6PI_PYRAB|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 1 DKPFVFL 7
D+PF+FL
Sbjct: 143 DEPFIFL 149


>sp|Y049_PYRAE|UNCHARACTERIZED serpin-like protein PAE0049|Pyrobaculum aerophilum (strain ATCC

Query: 1 DKPFVFLI 8
DKPF+F++
Sbjct: 340 DKPFLFVL 347


>sp|G6PI_PYRFU|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DKPFVFL 7
D+PF+FL
Sbjct: 143 DEPFIFL 149


>sp|Y1782_THEKO|UNCHARACTERIZED serpin-like protein TK1782|Thermococcus kodakarensis (strain ATCC

Query: 1 DKPFVFLI 8
D PF+F I
Sbjct: 399 DHPFIFFI 406


>sp|RRP41_ARCFU|EXOSOME complex component Rrp41|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DKPFVFLI 8
D PF FLI
Sbjct: 186 DMPFAFLI 193


>sp|Y2678_METMA|UNCHARACTERIZED serpin-like protein MM_2675|Methanosarcina mazei (strain ATCC

Query: 1 DKPFVFLID 9
D PF+F I+
Sbjct: 396 DHPFMFFIE 404


>sp|Y2613_METAC|UNCHARACTERIZED serpin-like protein MA_2613/MA_2612|Methanosarcina acetivorans

Query: 1 DKPFVFLID 9
D PF+F I+
Sbjct: 385 DLPFIFFIE 393


>sp|Y3388_METAC|UNCHARACTERIZED serpin-like protein MA_3388|Methanosarcina acetivorans (strain ATCC

Query: 1 DKPFVFLID 9
D PF+F I+
Sbjct: 396 DHPFMFFIE 404


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DKPFVFLIDQ 10
D PF+ L+DQ
Sbjct: 333 DMPFLDLMDQ 342


>sp|Y1460_ARCFU|UNCHARACTERIZED protein AF_1460|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PFVFLIDQ 10
P VFLI Q
Sbjct: 144 PLVFLISQ 151


>sp|XPB1_SULTO|DNA 3'-5' helicase/translocase StoXPB1|Sulfurisphaera tokodaii (strain

Query: 2 KPFVFLID 9
KP VF++D
Sbjct: 93 KPHVFILD 100




31|SequenceR|160|151|EEVLKDKPFV

>sp|ARGC_METMA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EEVLKDKPFV 10
EE +DKPFV
Sbjct: 260 EEFYRDKPFV 269


>sp|ARGC_METAC|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EEVLKDKPFV 10
EE +DKPFV
Sbjct: 256 EEFYRDKPFV 265


>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii (strain

Query: 1 EEVLKDKPFV 10
+++ KDKPF+
Sbjct: 263 DDIFKDKPFL 272


>sp|Y1574_METJA|UNCHARACTERIZED ATP-dependent helicase MJ1574|Methanocaldococcus jannaschii (strain

Query: 2 EVLKDKPFV 10
E+LKDKP V
Sbjct: 141 EILKDKPNV 149


>sp|ARGC_METAR|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 EEVLKDKPFV 10
+E K+KPFV
Sbjct: 256 DEFYKNKPFV 265


>sp|Y611_METJA|PUTATIVE zinc metalloprotease MJ0611|Methanocaldococcus jannaschii (strain

Query: 1 EEVLKDKPFV 10
E+VLK PF+
Sbjct: 164 EKVLKWNPFI 173


>sp|CHED_METBF|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina barkeri

Query: 4 LKDKPF 9
+KDKPF
Sbjct: 51 IKDKPF 56


>sp|LYSY_THEKO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 VLKDKPFV 10
V KD+PFV
Sbjct: 245 VYKDEPFV 252


>sp|YSO3_ACIAM|UNCHARACTERIZED protein in sor 5'region|Acidianus ambivalens (Desulfurolobus

Query: 1 EEVLKDKPF 9
EE++KDK F
Sbjct: 196 EEIVKDKDF 204


>sp|SIHH_METMP|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EEVLKDKPF 9
EE DKPF
Sbjct: 32 EEFKNDKPF 40


>sp|COFE_HALMA|COENZYME F420:L-glutamate ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EEVLKDKPFV 10
EEVL + PF+
Sbjct: 88 EEVLVEAPFI 97


>sp|METK_METS3|S-ADENOSYLMETHIONINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EEVLKDKPF 9
EE+L KPF
Sbjct: 176 EELLNSKPF 184


>sp|RASEA_METAC|ARCHAEOSINE synthase subunit beta|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 VLKDKPF 9
+LK+KPF
Sbjct: 152 ILKNKPF 158


>sp|GYAR_PYRFU|GLYOXYLATE reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EEVLKDKPFV 10
EEVLK+ FV
Sbjct: 199 EEVLKESDFV 208


>sp|COFE_ARCFU|COENZYME F420:L-glutamate ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEVLKDKPFV 10
EEVL D PF+
Sbjct: 84 EEVLLDFPFL 93


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 5 KDKPFV 10
KDKPF+
Sbjct: 240 KDKPFL 245


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EEVLKDKPFV 10
E++LK +PF+
Sbjct: 88 EDILKIRPFL 97


>sp|COFE_METBF|COENZYME F420:L-glutamate ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EVLKDKPFV 10
EVL +KPF+
Sbjct: 85 EVLVEKPFM 93


>sp|MDH_PYRHO|MALATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 KDKPFV 10
KDKPF+
Sbjct: 177 KDKPFL 182


>sp|HEM3_ARCFU|PROBABLE porphobilinogen deaminase|Archaeoglobus fulgidus (strain ATCC

Query: 2 EVLKDKPF 9
+++KDKP
Sbjct: 40 DIMKDKPL 47




32|SequenceR|165|156|TVNTGEEVLK

>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VNTGEEVLK 10
+NTGEE+ K
Sbjct: 772 INTGEEIWK 780


>sp|CAS1A_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VNTGEEVLK 10
VNT EEV++
Sbjct: 197 VNTAEEVMQ 205


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 1 TVNTGEEVL 9
+VN G+EVL
Sbjct: 123 SVNVGDEVL 131


>sp|GPI_THEON|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus onnurineus (strain NA1)

Query: 1 TVNTGEE 7
TVNTG+E
Sbjct: 138 TVNTGDE 144


>sp|G6PI_PYRAB|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 1 TVNTGEEVL 9
TVNTG+E
Sbjct: 138 TVNTGDEPF 146


>sp|G6PI_PYRHO|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TVNTGEE 7
TVNTG+E
Sbjct: 138 TVNTGDE 144


>sp|COFD_METHJ|2-PHOSPHO-L-LACTATE transferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 VNTGEEV 8
VNTGE++
Sbjct: 31 VNTGEDI 37


>sp|SYC_SULAC|CYSTEINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 NTGEEVLK 10
N GEE++K
Sbjct: 165 NQGEEIVK 172


>sp|MTTC1_METAC|TRIMETHYLAMINE corrinoid protein 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TVNTGEEVLK 10
+NTG EV+K
Sbjct: 72 AMNTGMEVIK 81




33|SequenceR|170|161|SVYCITVNTG

>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 SVYCITVNTG 10
SVYC +N G
Sbjct: 142 SVYCTPINVG 151


>sp|Y429_METAC|PUTATIVE nickel insertion protein|Methanosarcina acetivorans (strain ATCC

Query: 1 SVYCITVNTG 10
SVYC +N G
Sbjct: 142 SVYCTPINVG 151


>sp|Y1617_METMA|PUTATIVE nickel insertion protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SVYCITVNTG 10
SVYC +N G
Sbjct: 142 SVYCTPINVG 151


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 2 VYCITVN 8
VYC+TV+
Sbjct: 1017 VYCLTVD 1023


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SVYCITVNTG 10
S Y ITVN+G
Sbjct: 146 SPYRITVNSG 155


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 VYCITV 7
VYC+TV
Sbjct: 1015 VYCLTV 1020


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 VYCITV 7
VYC+TV
Sbjct: 1125 VYCLTV 1130


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 YCITVN 8
YCITV+
Sbjct: 522 YCITVD 527


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 1 SVYCITVN 8
SVYCI ++
Sbjct: 84 SVYCIYIS 91


>sp|Y373_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5

Query: 1 SVYCITVN 8
S +C+T+N
Sbjct: 45 STFCLTLN 52


>sp|Y1815_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 1 SVYCITVN 8
S +C+T+N
Sbjct: 45 STFCLTLN 52


>sp|THIDN_METJA|BIFUNCTIONAL thiamine biosynthesis protein ThiDN|Methanocaldococcus jannaschii

Query: 2 VYCITVNT 9
VYC T+ T
Sbjct: 29 VYCPTITT 36


>sp|KCY_THEVO|CYTIDYLATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SVYCITVNT 9
S+Y I VNT
Sbjct: 149 SIYDIVVNT 157


>sp|KCY_THEAC|CYTIDYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SVYCITVNT 9
S+Y I VNT
Sbjct: 149 SIYDIVVNT 157


>sp|GCST_HALSA|PROBABLE aminomethyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 VYCITVNTG 10
V C+ NTG
Sbjct: 186 VECLVANTG 194


>sp|GCST_HALS3|PROBABLE aminomethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 VYCITVNTG 10
V C+ NTG
Sbjct: 186 VECLVANTG 194




34|SequenceR|175|166|NQINRSVYCI

>sp|TRUD2_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii

Query: 4 NRSVYC 9
NRS+YC
Sbjct: 17 NRSLYC 22


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 INRSVYC 9
+NR VYC
Sbjct: 422 MNRPVYC 428


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 INRSVYC 9
+NR VYC
Sbjct: 420 MNRPVYC 426


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 QINRSVYC 9
++NR YC
Sbjct: 448 ELNRKAYC 455


>sp|SYS_KORCO|SERINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 NQINRSV 7
N+INRS+
Sbjct: 55 NEINRSI 61


>sp|Y912_METJA|UNCHARACTERIZED protein MJ0912|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 INRSVYCI 10
IN++ YCI
Sbjct: 195 INKASYCI 202


>sp|CAS2_THEPD|CRISPR-ASSOCIATED endoribonuclease Cas2|Thermofilum pendens (strain DSM 2475

Query: 3 INRSVY 8
+NRSVY
Sbjct: 30 VNRSVY 35




35|SequenceR|180|171|YCSVNNQINR

>sp|Y685_METJA|UNCHARACTERIZED ATP-binding protein MJ0685|Methanocaldococcus jannaschii (strain

Query: 1 YCSVNNQINR 10
YCSVNN + +
Sbjct: 108 YCSVNNWLRQ 117


>sp|IMDH_KORCO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 CSVNNQIN 9
CSV Q+N
Sbjct: 74 CSVEEQVN 81


>sp|RS2_METLZ|SMALL ribosomal subunit protein uS2|Methanocorpusculum labreanum (strain

Query: 2 CSVNNQIN 9
C +NN+ N
Sbjct: 149 CDINNRTN 156


>sp|Y1312_METJA|UPF0026 protein MJ1312|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YCSVNNQINR 10
YC V IN+
Sbjct: 33 YCQVGRTINK 42




36|SequenceR|185|176|QKGELYCSVN

>sp|CBID_PYRAE|COBALT-PRECORRIN-5B C(1)-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QKGELYCS 8
Q+GE+YC+
Sbjct: 53 QRGEIYCA 60


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 1 QKGELYCS 8
+KGE YCS
Sbjct: 401 EKGEAYCS 408


>sp|HMDH_METTH|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 QKGELYCSVN 10
+KG+LY +VN
Sbjct: 318 RKGDLYFAVN 327


>sp|HVO19_HALVD|PROBABLE S-adenosylmethionine-dependent methyltransferase HVO_0019|Haloferax

Query: 3 GELYCSVN 10
G YC+VN
Sbjct: 134 GTFYCAVN 141


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 1 QKGELYCSVN 10
+KGEL C V+
Sbjct: 334 KKGELRCVVS 343


>sp|AROC_METAC|CHORISMATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QKGELYCSVN 10
++GE+ CS N
Sbjct: 269 EQGEITCSKN 278


>sp|PCNA2_SULAC|DNA polymerase sliding clamp 2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 QKGELYCSV 9
Q G+LY SV
Sbjct: 158 QNGKLYLSV 166


>sp|Y685_METJA|UNCHARACTERIZED ATP-binding protein MJ0685|Methanocaldococcus jannaschii (strain

Query: 6 YCSVN 10
YCSVN
Sbjct: 108 YCSVN 112




37|SequenceR|190|181|QEGHIQKGEL

>sp|ILVD_NATPD|DIHYDROXY-ACID dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QEGHIQKGEL 10
QEGHI+ G++
Sbjct: 450 QEGHIESGDV 459


>sp|ILVD_HALMA|DIHYDROXY-ACID dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QEGHIQKGEL 10
QEGH++ G++
Sbjct: 435 QEGHVESGDV 444


>sp|MOBA_PYRFU|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus furiosus (strain

Query: 2 EGHIQKGE 9
EG+I++GE
Sbjct: 142 EGYIERGE 149


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EGHIQKGEL 10
EG+I+KG +
Sbjct: 116 EGYIEKGTM 124


>sp|CPKA_THEKO|CARBAMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QEGHIQKGEL 10
+EGH +KG +
Sbjct: 265 KEGHFKKGSM 274


>sp|NADE_PYRAE|NH(3)-DEPENDENT NAD(+) synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EGHIQKGEL 10
+GH +GEL
Sbjct: 198 QGHTAEGEL 206


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 1 QEGHIQKGEL 10
++GH++ G+L
Sbjct: 108 EKGHVKPGDL 117


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 QEGHIQKGEL 10
+EG++ KGEL
Sbjct: 575 KEGNLVKGEL 584


>sp|PYRE_PYRHO|OROTATE phosphoribosyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EGHIQKGE 9
EG++QKG+
Sbjct: 106 EGNVQKGD 113


>sp|GLCDH_THEAC|GLUCOSE 1-dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GHIQKGEL 10
G+I+KG+L
Sbjct: 81 GYIKKGDL 88




38|SequenceR|195|186|VHPDLQEGHI

>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 HPDLQEGH 9
HP +EGH
Sbjct: 373 HPQTKEGH 380


>sp|SURE_METMA|5'-NUCLEOTIDASE SurE|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VHPDLQEGHI 10
VH +Q+GH+
Sbjct: 236 VHAIMQKGHV 245


>sp|SURE_METBF|5'-NUCLEOTIDASE SurE|Methanosarcina barkeri (strain Fusaro /

Query: 1 VHPDLQEGHI 10
VH +Q+GH+
Sbjct: 236 VHAIMQKGHV 245


>sp|MRE11_METTH|DNA double-strand break repair protein|Methanothermobacter

Query: 2 HPDLQE 7
HPDL+E
Sbjct: 186 HPDLRE 191


>sp|TKSP_THEKO|SUBTILISIN-LIKE serine protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HPDLQ 6
HPDLQ
Sbjct: 177 HPDLQ 181


>sp|SUCC_DESA1|SUCCINATE--COA ligase [ADP-forming] subunit beta|Desulfurococcus amylolyticus

Query: 2 HPDLQ 6
HPDLQ
Sbjct: 219 HPDLQ 223


>sp|R15PI_HALTV|RIBOSE 1,5-bisphosphate isomerase|Haloterrigena turkmenica (strain ATCC

Query: 1 VHPDLQEGH 9
+HPD GH
Sbjct: 239 LHPDTMTGH 247


>sp|SYR_PYRAR|ARGININE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 PDLQEGHI 10
PDL GHI
Sbjct: 187 PDLVVGHI 194


>sp|SUCC_NATPD|SUCCINATE--COA ligase [ADP-forming] subunit beta|Natronomonas pharaonis (strain

Query: 2 HPDLQE 7
HPDL+E
Sbjct: 218 HPDLEE 223


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VHPDLQE 7
+HPDL++
Sbjct: 97 IHPDLEK 103


>sp|BTUDA_HALSA|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 1 VHPDLQEGHI 10
VH +++GH+
Sbjct: 21 VHASIRDGHL 30


>sp|BTUDA_HALS3|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 1 VHPDLQEGHI 10
VH +++GH+
Sbjct: 21 VHASIRDGHL 30


>sp|AROA_AERPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VHPDLQEGHI 10
VHP EG +
Sbjct: 12 VHPSTVEGRV 21


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 3 PDLQEGHI 10
PDL EG +
Sbjct: 368 PDLPEGQV 375


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 VHPDLQEG 8
+HPD EG
Sbjct: 432 LHPDRDEG 439




39|SequenceR|200|191|LNFATVHPDL

>sp|IF6_METB6|TRANSLATION initiation factor 6|Methanoregula boonei (strain DSM 21154

Query: 3 FATVHPDL 10
FA VHPDL
Sbjct: 108 FAAVHPDL 115


>sp|IF6_METLZ|TRANSLATION initiation factor 6|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 NFATVHPDL 10
+FA VHPD+
Sbjct: 107 SFAVVHPDM 115


>sp|Y2784_METAR|UPF0179 protein UNCMA_27840|Methanocella arvoryzae (strain DSM 22066

Query: 1 LNFATVHPD 9
LNFA HP+
Sbjct: 106 LNFALCHPE 114


>sp|IF6_METHJ|TRANSLATION initiation factor 6|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 NFATVHPDL 10
+FA VHP++
Sbjct: 107 HFAAVHPEM 115


>sp|IF6_METKA|TRANSLATION initiation factor 6|Methanopyrus kandleri (strain AV19 /

Query: 4 ATVHPDL 10
A VHPDL
Sbjct: 111 ALVHPDL 117


>sp|IF6_METPE|TRANSLATION initiation factor 6|Methanosphaerula palustris (strain ATCC

Query: 4 ATVHPDL 10
A VHPD+
Sbjct: 109 AAVHPDM 115


>sp|APGM_AERPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Aeropyrum pernix (strain ATCC 700893

Query: 2 NFATVHP 8
NFATV P
Sbjct: 94 NFATVDP 100


>sp|IF6_METAC|TRANSLATION initiation factor 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 ATVHPDL 10
A VHPDL
Sbjct: 107 ALVHPDL 113


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 LNFATVHPDL 10
L+FA+++P L
Sbjct: 599 LDFASLYPSL 608


>sp|RL24_METKA|LARGE ribosomal subunit protein uL24|Methanopyrus kandleri (strain AV19

Query: 4 ATVHPDL 10
AT+HP+L
Sbjct: 30 ATLHPEL 36


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LNFATVHPD 9
L+F+ HPD
Sbjct: 243 LHFSRFHPD 251


>sp|THIM_METMA|HYDROXYETHYLTHIAZOLE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NFATVHPD 9
+FA+V+PD
Sbjct: 200 SFASVNPD 207


>sp|SYH_SULAC|HISTIDINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 FATVHPDL 10
F +HPD+
Sbjct: 278 FEVIHPDV 285


>sp|RIBL_METVS|FAD synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LNFATVHPD 9
LNFA H D
Sbjct: 24 LNFAKKHAD 32


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 TVHPD 9
TVHPD
Sbjct: 236 TVHPD 240


>sp|RIBL_METV3|FAD synthase|Methanococcus voltae (strain ATCC BAA-1334

Query: 1 LNFATVHPD 9
LNFA H D
Sbjct: 46 LNFAKKHAD 54


>sp|RIBL_METM5|FAD synthase|Methanococcus maripaludis (strain C5 /

Query: 1 LNFATVHPD 9
LNFA H D
Sbjct: 23 LNFAKKHAD 31


>sp|RIBL_METMP|FAD synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LNFATVHPD 9
LNFA H D
Sbjct: 23 LNFAKKHAD 31


>sp|RIBL_METM7|FAD synthase|Methanococcus maripaludis (strain C7 /

Query: 1 LNFATVHPD 9
LNFA H D
Sbjct: 23 LNFAKKHAD 31


>sp|RIBL_METM6|FAD synthase|Methanococcus maripaludis (strain C6 /

Query: 1 LNFATVHPD 9
LNFA H D
Sbjct: 23 LNFAKKHAD 31


>sp|GGPS_SACS2|GERANYLGERANYL diphosphate synthase|Saccharolobus solfataricus (strain ATCC

Query: 2 NFATVHPDL 10
NF VH D+
Sbjct: 78 NFTLVHDDI 86


>sp|GGPPS_GEOAI|GERANYLGERANYL pyrophosphate synthase|Geoglobus acetivorans

Query: 2 NFATVHPDL 10
NF VH D+
Sbjct: 75 NFTLVHDDI 83


>sp|ARGC_META3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LNFATVHPDL 10
+N VHP+L
Sbjct: 40 VNITKVHPNL 49




40|SequenceR|205|196|FPVSNLNFAT

>sp|CAPPA_METAC|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FP--VSNLNFAT 10
FP VS+LNFAT
Sbjct: 430 FPSLVSDLNFAT 441


>sp|RS8_NANEQ|SMALL ribosomal subunit protein uS8|Nanoarchaeum equitans (strain

Query: 1 FPVSNL 6
FPVSNL
Sbjct: 27 FPVSNL 32


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 3 VSNLNFAT 10
V NLNFA+
Sbjct: 470 VDNLNFAS 477


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 3 VSNLNFAT 10
V NLNFA+
Sbjct: 470 VDNLNFAS 477


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 3 VSNLNFAT 10
V NLNFA+
Sbjct: 469 VDNLNFAS 476


>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VSNLNFAT 10
V NLNFA+
Sbjct: 470 VDNLNFAS 477


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VSNLNFAT 10
V NLNFA+
Sbjct: 470 VDNLNFAS 477


>sp|PURL_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus abyssi (strain GE5 /

Query: 3 VSNLNFAT 10
V NLNFA+
Sbjct: 470 VDNLNFAS 477


>sp|HIS8_METBF|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FPVSNL 6
FPVSNL
Sbjct: 87 FPVSNL 92




41|SequenceR|210|201|GKNRIFPVSN

>sp|Y1196_METJA|PUTATIVE amino-acid transporter MJ1196|Methanocaldococcus jannaschii (strain

Query: 1 GKNRIFP 7
GK+RIFP
Sbjct: 275 GKDRIFP 281


>sp|XERA_PYRAB|TYROSINE recombinase XerA|Pyrococcus abyssi (strain GE5 /

Query: 1 GKNRIFPVS 9
GK+R+ P+S
Sbjct: 162 GKDRVVPIS 170


>sp|XERA_PYRHO|TYROSINE recombinase XerA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GKNRIFPVS 9
GK+R+ P+S
Sbjct: 162 GKDRVIPIS 170


>sp|NROR_PYRFU|NAD(P)H:RUBREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KNRIFPVS 9
+NR+FP S
Sbjct: 51 RNRLFPYS 58


>sp|COFD_METM6|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain C6 /

Query: 2 KNRIFPVSN 10
K++I+P+SN
Sbjct: 125 KSKIYPMSN 133


>sp|COFD_METM5|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain C5 /

Query: 2 KNRIFPVSN 10
K++I+P+SN
Sbjct: 125 KSKIYPMSN 133


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 GKNRIFPV 8
G+ +IFPV
Sbjct: 539 GRGKIFPV 546


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 GKNRIFPV 8
G+NR+F V
Sbjct: 651 GRNRVFVV 658


>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKNRIFPVSN 10
GKN F VSN
Sbjct: 563 GKNEGFAVSN 572


>sp|MPTA_PICTO|GTP cyclohydrolase MptA|Picrophilus torridus (strain ATCC 700027

Query: 3 NRIFPVS 9
N+I+PVS
Sbjct: 106 NKIYPVS 112


>sp|RS8_NANEQ|SMALL ribosomal subunit protein uS8|Nanoarchaeum equitans (strain

Query: 2 KNRIFPVSN 10
K FPVSN
Sbjct: 23 KTAFFPVSN 31


>sp|Y1059_METJA|UNCHARACTERIZED glycosyltransferase MJ1059|Methanocaldococcus jannaschii (strain

Query: 3 NRIFPVSN 10
N+IF +SN
Sbjct: 103 NKIFKISN 110




42|SequenceR|215|206|CYINTGKNRI

>sp|RRP41_ARCFU|EXOSOME complex component Rrp41|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CYINTGKNRI 10
CY+ GKN++
Sbjct: 43 CYLEMGKNKV 52


>sp|RS9_SULTO|SMALL ribosomal subunit protein uS9|Sulfurisphaera tokodaii (strain DSM

Query: 1 CYINTGKNRI 10
CYI GK R+
Sbjct: 21 CYITPGKGRV 30


>sp|RRP41_METMA|EXOSOME complex component Rrp41|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CYINTGKNRI 10
CY+ G+N+I
Sbjct: 43 CYLEWGRNKI 52


>sp|RS9_SACS2|SMALL ribosomal subunit protein uS9|Saccharolobus solfataricus (strain

Query: 1 CYINTGKNRI 10
CYI GK R+
Sbjct: 21 CYIYAGKGRV 30


>sp|Y597_METJA|UNCHARACTERIZED protein MJ0597|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CYINTGKNRI 10
CY+ T KN+I
Sbjct: 53 CYMATQKNKI 62


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YINTGKN 8
YINTG N
Sbjct: 251 YINTGDN 257


>sp|RRP41_THEGJ|EXOSOME complex component Rrp41|Thermococcus gammatolerans (strain DSM

Query: 2 YINTGKNRI 10
YI GKN+I
Sbjct: 44 YIEWGKNKI 52


>sp|RRP41_PYRFU|EXOSOME complex component Rrp41|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YINTGKNRI 10
YI GKN+I
Sbjct: 44 YIEWGKNKI 52


>sp|RRP41_PYRAB|EXOSOME complex component Rrp41|Pyrococcus abyssi (strain GE5 /

Query: 2 YINTGKNRI 10
YI GKN+I
Sbjct: 44 YIEWGKNKI 52


>sp|Y1017_METAC|UPF0251 protein MA_1017|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YINTGKNRI 10
YINTG+ R+
Sbjct: 93 YINTGECRV 101


>sp|Y030_ARCFU|UNCHARACTERIZED protein AF_0030|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YINTGKNRI 10
YI++GK RI
Sbjct: 16 YIDSGKIRI 24


>sp|RL10_PICTO|LARGE ribosomal subunit protein uL10|Picrophilus torridus (strain ATCC

Query: 4 NTGKNRI 10
NTGKN I
Sbjct: 65 NTGKNNI 71


>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YINTGKN 8
YINT KN
Sbjct: 141 YINTKKN 147


>sp|PUR5_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YINTGKNRI 10
+INT KNR+
Sbjct: 303 FINTLKNRV 311


>sp|Y2090_METMA|UPF0251 protein MM_2090|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YINTGKNRI 10
Y+NTG+ RI
Sbjct: 93 YVNTGECRI 101


>sp|IF2P_THEVO|PROBABLE translation initiation factor IF-2|Thermoplasma volcanium (strain

Query: 2 YINTGKNR 9
++NTGK++
Sbjct: 288 FVNTGKSQ 295


>sp|GLCD3_SACS2|GLUCOSE 1-dehydrogenase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YINTGKNRI 10
+INT K+R+
Sbjct: 233 FINTNKDRL 241


>sp|Y343_META3|UPF0280 protein Maeo_0343|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 YINTGKNRI 10
YIN KN I
Sbjct: 22 YINLAKNTI 30




43|SequenceR|220|211|GQSAECYINT

>sp|NADA_METB6|QUINOLINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 GQSAECYINT 10
G + CY+NT
Sbjct: 107 GAAVVCYVNT 116


>sp|Y3535_METJA|UNCHARACTERIZED protein MJECL35|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 CYINT 10
CY+NT
Sbjct: 203 CYVNT 207


>sp|Y1312_METJA|UPF0026 protein MJ1312|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 ECYINT 10
+CY+NT
Sbjct: 199 KCYLNT 204




44|SequenceR|225|216|GESVNGQSAE

>sp|GCSH3_SACS2|PROBABLE glycine cleavage system H|Saccharolobus solfataricus (strain ATCC

Query: 1 GESVNGQS 8
GE VNG+S
Sbjct: 54 GEKVNGRS 61


>sp|PRIS_STAMF|DNA primase small subunit PriS|Staphylothermus marinus (strain ATCC

Query: 1 GESVNGQSA 9
G S+NG+S
Sbjct: 288 GNSINGKSG 296


>sp|FAEHP_METBF|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina barkeri (strain Fusaro /

Query: 1 GESVNGQSAE 10
GE++ GQ AE
Sbjct: 5 GEALMGQGAE 14




45|SequenceR|230|221|VIGKMGESVN

>sp|PCNA2_SULAC|DNA polymerase sliding clamp 2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VIGKMGESV 9
V+G MGES+
Sbjct: 166 VMGDMGESI 174


>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VIGKMGESVN 10
V+GK+G+ +N
Sbjct: 112 VVGKVGDPIN 121


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 1 VIGKMGESV 9
VIGK GE++
Sbjct: 118 VIGKNGETL 126


>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 1 VIGKMGESV 9
VIGK GE++
Sbjct: 118 VIGKNGETL 126


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VIGKMGESV 9
VIGK GE++
Sbjct: 121 VIGKNGETL 129


>sp|PUR5_METM7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C7 /

Query: 1 VIGKMGESV 9
VIGK+ ESV
Sbjct: 318 VIGKIEESV 326




46|SequenceR|235|226|KSVFLVIGKM

>sp|RL4_ARCFU|LARGE ribosomal subunit protein uL4|Archaeoglobus fulgidus (strain ATCC

Query: 1 KSVFLVIGK 9
KSV LV+GK
Sbjct: 192 KSVLLVVGK 200


>sp|RFCL_METBU|REPLICATION factor C large subunit|Methanococcoides burtonii (strain DSM 6242

Query: 1 KSVFLVIGKM 10
+S+F V+GK+
Sbjct: 231 ESIFKVLGKI 240




47|SequenceR|240|231|PEELVKSVFL

>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 1 PEELVKSVFL 10
P E+V +VFL
Sbjct: 346 PNEIVPTVFL 355


>sp|PYRH_METVS|URIDYLATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PEELVKSVF 9
P+E++KSV
Sbjct: 207 PDEILKSVL 215


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PEELVKSV 8
PEEL+K +
Sbjct: 577 PEELIKKI 584


>sp|RL11_SULTO|LARGE ribosomal subunit protein uL11|Sulfurisphaera tokodaii (strain DSM

Query: 1 PEELVKSV 8
P+ELVK+V
Sbjct: 142 PKELVKAV 149


>sp|GATE_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 EELVKSVF 9
EEL+KSV+
Sbjct: 531 EELIKSVY 538


>sp|GATE_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 EELVKSVF 9
EEL+KSV+
Sbjct: 531 EELIKSVY 538


>sp|GATE_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.16.4

Query: 2 EELVKSVF 9
EEL+KSV+
Sbjct: 531 EELIKSVY 538


>sp|GATE_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.14.25

Query: 2 EELVKSVF 9
EEL+KSV+
Sbjct: 531 EELIKSVY 538


>sp|GATE_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 EELVKSVF 9
EEL+KSV+
Sbjct: 531 EELIKSVY 538


>sp|GATE_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 EELVKSVF 9
EEL+KSV+
Sbjct: 531 EELIKSVY 538


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 1 PEELVKSV 8
PE LVKS+
Sbjct: 20 PENLVKSL 27


>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PEELVKSV 8
PEELVK V
Sbjct: 285 PEELVKLV 292


>sp|Y1771_AERPE|MEMO1 family protein APE_1771|Aeropyrum pernix (strain ATCC 700893

Query: 2 EELVKSV 8
EELVKS+
Sbjct: 18 EELVKSI 24




48|SequenceR|245|236|CSFDKPEELV

>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii

Query: 4 DKPEELV 10
DKPEELV
Sbjct: 22 DKPEELV 28


>sp|GLMS_METAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina acetivorans (strain

Query: 1 CSFDKPEEL 9
CS DKP L
Sbjct: 603 CSIDKPRNL 611


>sp|Y778_AERPE|PUTATIVE HTH-type transcriptional regulatory protein|Aeropyrum pernix

Query: 3 FDKPEE 8
FDKPEE
Sbjct: 212 FDKPEE 217


>sp|TRPD_METST|ANTHRANILATE phosphoribosyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 2 SFDKPEELV 10
SF KPE++V
Sbjct: 263 SFSKPEDIV 271


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 SFDKPEEL 9
+ DKPEEL
Sbjct: 19 ALDKPEEL 26


>sp|TRPD_IGNH4|ANTHRANILATE phosphoribosyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 CSFDKPEEL 9
C ++PEEL
Sbjct: 47 CGRERPEEL 55


>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain ATCC

Query: 3 FDKPEEL 9
FDKPE++
Sbjct: 145 FDKPEDI 151


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 CSFDKPEE 8
CSF PEE
Sbjct: 218 CSFLPPEE 225


>sp|RL7A_METMA|LARGE ribosomal subunit protein eL8|Methanosarcina mazei (strain ATCC

Query: 3 FDKPEEL 9
FD PEEL
Sbjct: 7 FDVPEEL 13


>sp|PDXS_METVS|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus vannielii (strain

Query: 2 SFDKPE 7
+FDKPE
Sbjct: 262 NFDKPE 267


>sp|PDXS_METVA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus vannielii

Query: 2 SFDKPE 7
+FDKPE
Sbjct: 200 NFDKPE 205


>sp|PDXS_METMP|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus maripaludis

Query: 2 SFDKPE 7
+FDKPE
Sbjct: 262 NFDKPE 267


>sp|RL7A_METS3|LARGE ribosomal subunit protein eL8|Methanobrevibacter smithii (strain

Query: 3 FDKPEEL 9
FD PEEL
Sbjct: 9 FDTPEEL 15


>sp|NDK_METHJ|NUCLEOSIDE diphosphate kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 KPEELV 10
KPEELV
Sbjct: 132 KPEELV 137


>sp|RL7A_METBF|LARGE ribosomal subunit protein eL8|Methanosarcina barkeri (strain

Query: 3 FDKPEEL 9
FD PEEL
Sbjct: 7 FDVPEEL 13


>sp|RL7A_METAC|LARGE ribosomal subunit protein eL8|Methanosarcina acetivorans (strain

Query: 3 FDKPEEL 9
FD PEEL
Sbjct: 7 FDVPEEL 13


>sp|NEP1_THESM|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus sibiricus

Query: 3 FDKPEELV 10
F KPEE++
Sbjct: 32 FKKPEEIL 39


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 SFDKPEELV 10
+F KP+ELV
Sbjct: 607 AFYKPDELV 615


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SFDKPEEL 9
+FD+P+EL
Sbjct: 539 AFDEPDEL 546


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 FDKPEELV 10
F PEELV
Sbjct: 610 FHNPEELV 617


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 KPEELV 10
KPEELV
Sbjct: 615 KPEELV 620


>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SFDKPEE 8
+FD PEE
Sbjct: 130 NFDNPEE 136


>sp|Y034_METJA|IRON-SULFUR cluster assembly SufBD family|Methanocaldococcus jannaschii

Query: 4 DKPEELV 10
+KPEE+V
Sbjct: 19 EKPEEIV 25


>sp|PUS10_ACIS3|TRNA pseudouridine synthase Pus10|Acidilobus saccharovorans (strain DSM

Query: 2 SFDKPEELV 10
SFD+P+ +V
Sbjct: 171 SFDRPDVVV 179


>sp|TH11_HALSA|PROBABLE transposase for insertion sequence|Halobacterium salinarum

Query: 1 CSFDKP 6
C FD+P
Sbjct: 88 CGFDRP 93


>sp|TH11_HALS3|PROBABLE transposase for insertion sequence|Halobacterium salinarum

Query: 1 CSFDKP 6
C FD+P
Sbjct: 88 CGFDRP 93


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 CSFDKPE 7
CS+D P+
Sbjct: 395 CSYDMPQ 401


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 CSFDKPE 7
CS+D P+
Sbjct: 395 CSYDMPQ 401


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 CSFDKPE 7
CS+D P+
Sbjct: 395 CSYDMPQ 401


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 CSFDKPE 7
CS+D P+
Sbjct: 395 CSYDMPQ 401




49|SequenceR|250|241|FDETECSFDK

>sp|GATA_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 1 FDETECS 7
+DETEC+
Sbjct: 228 YDETECT 234


>sp|Y433_METJA|UNCHARACTERIZED protein MJ0433|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FDETECSFDK 10
+ +T C FDK
Sbjct: 73 YKKTRCYFDK 82


>sp|DHE_HALSI|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (Halobacterium halobium)

Query: 1 FDETECSFD 9
FD C FD
Sbjct: 54 FDAYRCQFD 62


>sp|DHE_HALSA|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (strain ATCC 700922

Query: 1 FDETECSFD 9
FD C FD
Sbjct: 54 FDAYRCQFD 62


>sp|DTDA_PYRAB|D-AMINOACYL-TRNA deacylase|Pyrococcus abyssi (strain GE5 /

Query: 1 FDETECSFD 9
F ETE FD
Sbjct: 26 FKETELKFD 34


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 3 ETECSFDK 10
+T C FDK
Sbjct: 504 DTYCPFDK 511


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FDETECSFDK 10
F + CSF+K
Sbjct: 470 FGDGTCSFEK 479


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 ECSFDK 10
EC FDK
Sbjct: 159 ECEFDK 164


>sp|RPO3_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum aerophilum (strain ATCC

Query: 5 ECSFDK 10
ECSF+K
Sbjct: 190 ECSFNK 195




50|SequenceR|255|246|CHLTKFDETE

>sp|NARB_HALMT|PUTATIVE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 1 CHLTKFDETE 10
CH KFD T+
Sbjct: 170 CHFGKFDPTD 179


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 2 HLTKFDE 8
HLTKFD+
Sbjct: 84 HLTKFDD 90


>sp|Y664_METJA|UNCHARACTERIZED protein MJ0664|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LTKFDETE 10
L KFD+TE
Sbjct: 119 LIKFDKTE 126


>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 HLTKFDETE 10
HLT++D E
Sbjct: 280 HLTRYDPRE 288


>sp|SYFA_ARCFU|PHENYLALANINE--TRNA ligase alpha subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HLTKFDETE 10
HL +FD+ E
Sbjct: 350 HLPEFDQLE 358


>sp|Y366_METJA|UNCHARACTERIZED protein MJ0366|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CHLTKFDETE 10
C L K DE E
Sbjct: 81 CELVKLDEGE 90




51|SequenceR|260|251|GPDWTCHLTK

>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PDWTCHLTK 10
P+W HLTK
Sbjct: 80 PEWKEHLTK 88


>sp|RNP4_THEKO|RIBONUCLEASE P protein component 4|Thermococcus kodakarensis (strain ATCC

Query: 1 GPDWT 5
GPDWT
Sbjct: 127 GPDWT 131


>sp|ACAR_METS5|ACRYLOYL-COENZYME A reductase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GPDWTCHLTK 10
PD TCH +
Sbjct: 88 APDGTCHYCR 97


>sp|CS12F_MICX1|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f2|Micrarchaeota archaeon (strain

Query: 3 DWTCHLT 9
D+TCH T
Sbjct: 406 DYTCHKT 412


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 PDWTCHL 8
PD+T HL
Sbjct: 95 PDYTIHL 101


>sp|Y488_METKA|PROTEIN MK0488|Methanopyrus kandleri (strain AV19 /

Query: 2 PDWTC 6
PDW C
Sbjct: 171 PDWWC 175


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 PDWTCH 7
P W CH
Sbjct: 83 PGWDCH 88


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPDWTCHL 8
G DW C L
Sbjct: 124 GHDWMCGL 131


>sp|DCUP_PICTO|UROPORPHYRINOGEN decarboxylase|Picrophilus torridus (strain ATCC 700027

Query: 1 GPDWTCHLTK 10
GPD +LTK
Sbjct: 150 GPDSNLNLTK 159


>sp|CIMA_SULAC|(R)-CITRAMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GPDWTCHLT 9
G W+ H+T
Sbjct: 106 GKSWSLHVT 114


>sp|TRUB_METAC|PROBABLE tRNA pseudouridine synthase B|Methanosarcina acetivorans (strain

Query: 1 GPDWTCHL 8
G ++ CHL
Sbjct: 103 GKEYVCHL 110


>sp|QUEC_PYRAE|7-CYANO-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GPDWTCH 7
GPD TC+
Sbjct: 16 GPDSTCY 22




52|SequenceR|265|256|LATDTGPDWT

>sp|TF2B2_SACS2|TRANSCRIPTION initiation factor IIB 2|Saccharolobus solfataricus (strain ATCC

Query: 2 ATDTGPDW 9
A D GPDW
Sbjct: 34 AVDPGPDW 41


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 3 TDTGPDW 9
T+TGPDW
Sbjct: 449 TNTGPDW 455


>sp|TF2B_PYROC|TRANSCRIPTION initiation factor IIB|Pyrodictium occultum

Query: 4 DTGPDW 9
DTGP+W
Sbjct: 46 DTGPEW 51


>sp|TF2B_CALMQ|TRANSCRIPTION initiation factor IIB|Caldivirga maquilingensis (strain ATCC

Query: 4 DTGPDW 9
DTGP+W
Sbjct: 77 DTGPEW 82


>sp|RNP4_THEKO|RIBONUCLEASE P protein component 4|Thermococcus kodakarensis (strain ATCC

Query: 6 GPDWT 10
GPDWT
Sbjct: 127 GPDWT 131


>sp|SYC_SULTO|CYSTEINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ATDTGPDWT 10
A +TG DWT
Sbjct: 79 AQETGKDWT 87


>sp|TF2B_SULTO|TRANSCRIPTION initiation factor IIB|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ATDTGPDW 9
A D GP+W
Sbjct: 41 AIDQGPEW 48


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 1 LATDTGPDW 9
L + GPDW
Sbjct: 316 LEANNGPDW 324


>sp|TF2B_METTL|TRANSCRIPTION initiation factor IIB|Methanothermococcus thermolithotrophicus

Query: 4 DTGPDW 9
D GP+W
Sbjct: 75 DVGPEW 80


>sp|TF2B_METMP|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain DSM 14266

Query: 4 DTGPDW 9
D GP+W
Sbjct: 75 DVGPEW 80


>sp|TF2B_METM7|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C7 /

Query: 4 DTGPDW 9
D GP+W
Sbjct: 75 DVGPEW 80


>sp|TF2B_METM6|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C6 /

Query: 4 DTGPDW 9
D GP+W
Sbjct: 75 DVGPEW 80


>sp|TF2B_METM5|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C5 /

Query: 4 DTGPDW 9
D GP+W
Sbjct: 75 DVGPEW 80


>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC

Query: 4 DTGPDW 9
D GP+W
Sbjct: 70 DVGPEW 75


>sp|TF2B_ARCFU|TRANSCRIPTION initiation factor IIB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DTGPDW 9
D GP+W
Sbjct: 62 DAGPEW 67


>sp|KPYK_PYRAE|PYRUVATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 TDTGPDW 9
T+TG DW
Sbjct: 144 TNTGSDW 150


>sp|TF2B_PYRWO|TRANSCRIPTION initiation factor IIB|Pyrococcus woesei

Query: 4 DTGPDW 9
D GP+W
Sbjct: 39 DMGPEW 44


>sp|TF2B_PYRHO|TRANSCRIPTION initiation factor IIB|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 DTGPDW 9
D GP+W
Sbjct: 39 DMGPEW 44


>sp|TF2B_PYRFU|TRANSCRIPTION initiation factor IIB|Pyrococcus furiosus (strain ATCC 43587

Query: 4 DTGPDW 9
D GP+W
Sbjct: 39 DMGPEW 44


>sp|TF2B_PYRAB|TRANSCRIPTION initiation factor IIB|Pyrococcus abyssi (strain GE5 /

Query: 4 DTGPDW 9
D GP+W
Sbjct: 39 DMGPEW 44


>sp|TF2B_METTP|TRANSCRIPTION initiation factor IIB|Methanothrix thermoacetophila (strain DSM

Query: 4 DTGPDW 9
D GP+W
Sbjct: 73 DQGPEW 78


>sp|TF2B_IGNH4|TRANSCRIPTION initiation factor IIB|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 DTGPDW 9
D GP+W
Sbjct: 43 DQGPEW 48


>sp|TF2B2_THEVO|TRANSCRIPTION initiation factor IIB 2|Thermoplasma volcanium (strain ATCC 51530

Query: 4 DTGPDW 9
D GP+W
Sbjct: 49 DQGPEW 54


>sp|TF2B2_THEAC|TRANSCRIPTION initiation factor IIB 2|Thermoplasma acidophilum (strain ATCC

Query: 4 DTGPDW 9
D GP+W
Sbjct: 43 DQGPEW 48


>sp|TF2B1_THEVO|TRANSCRIPTION initiation factor IIB 1|Thermoplasma volcanium (strain ATCC 51530

Query: 4 DTGPDW 9
D GP+W
Sbjct: 48 DQGPEW 53


>sp|TF2B1_THEAC|TRANSCRIPTION initiation factor IIB 1|Thermoplasma acidophilum (strain ATCC

Query: 4 DTGPDW 9
D GP+W
Sbjct: 48 DQGPEW 53


>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 4 DTGPDW 9
D GP+W
Sbjct: 74 DIGPEW 79


>sp|TF2B_SULAC|TRANSCRIPTION initiation factor IIB|Sulfolobus acidocaldarius (strain ATCC

Query: 4 DTGPDW 9
D GP+W
Sbjct: 42 DQGPEW 47


>sp|TF2B_METMZ|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (Methanosarcina

Query: 4 DTGPDW 9
D GP+W
Sbjct: 73 DEGPEW 78


>sp|TF2B_METMA|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 DTGPDW 9
D GP+W
Sbjct: 73 DEGPEW 78


>sp|TF2B_METAC|TRANSCRIPTION initiation factor IIB|Methanosarcina acetivorans (strain ATCC

Query: 4 DTGPDW 9
D GP+W
Sbjct: 73 DEGPEW 78


>sp|TF2B2_THEKO|TRANSCRIPTION initiation factor IIB 2|Thermococcus kodakarensis (strain ATCC

Query: 4 DTGPDW 9
D GP+W
Sbjct: 42 DEGPEW 47


>sp|TF2B1_THEKO|TRANSCRIPTION initiation factor IIB 1|Thermococcus kodakarensis (strain ATCC

Query: 4 DTGPDW 9
D GP+W
Sbjct: 39 DEGPEW 44


>sp|TF2B_METKA|TRANSCRIPTION initiation factor IIB|Methanopyrus kandleri (strain AV19 /

Query: 4 DTGPDW 9
D GP+W
Sbjct: 47 DPGPEW 52


>sp|TF2B7_HALSA|TRANSCRIPTION initiation factor IIB 7|Halobacterium salinarum (strain ATCC

Query: 4 DTGPDW 9
D GP+W
Sbjct: 61 DPGPEW 66


>sp|TF2B_METPE|TRANSCRIPTION initiation factor IIB|Methanosphaerula palustris (strain ATCC

Query: 4 DTGPDW 9
D GP+W
Sbjct: 70 DRGPEW 75


>sp|TF2B_METMJ|TRANSCRIPTION initiation factor IIB|Methanoculleus marisnigri (strain ATCC

Query: 4 DTGPDW 9
D GP+W
Sbjct: 73 DRGPEW 78


>sp|TF2B_METB6|TRANSCRIPTION initiation factor IIB|Methanoregula boonei (strain DSM 21154

Query: 4 DTGPDW 9
D GP+W
Sbjct: 70 DRGPEW 75


>sp|SYC_SULAC|CYSTEINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ATDTGPDW 9
A +TG DW
Sbjct: 80 ANETGKDW 87


>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 DTGPDW 9
D GP+W
Sbjct: 69 DLGPEW 74


>sp|TF2B_PYRIL|TRANSCRIPTION initiation factor IIB|Pyrobaculum islandicum (strain DSM 4184

Query: 4 DTGPDW 9
D GP+W
Sbjct: 69 DLGPEW 74


>sp|TF2B_PYRAR|TRANSCRIPTION initiation factor IIB|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 DTGPDW 9
D GP+W
Sbjct: 69 DLGPEW 74


>sp|TF2B_PYRAE|TRANSCRIPTION initiation factor IIB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 DTGPDW 9
D GP+W
Sbjct: 69 DLGPEW 74


>sp|TF2B_METST|TRANSCRIPTION initiation factor IIB|Methanosphaera stadtmanae (strain ATCC

Query: 4 DTGPDW 9
D GP+W
Sbjct: 47 DMGPEW 52


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 4 DTGPDW 9
D GP+W
Sbjct: 44 DQGPEW 49


>sp|TF2B_METTH|TRANSCRIPTION initiation factor IIB|Methanothermobacter thermautotrophicus

Query: 4 DTGPDW 9
D GP+W
Sbjct: 46 DMGPEW 51


>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 6 GPDW 9
GPDW
Sbjct: 50 GPDW 53


>sp|TF2B_SACSH|TRANSCRIPTION initiation factor IIB|Saccharolobus shibatae (strain ATCC 51178

Query: 4 DTGPDW 9
D GP+W
Sbjct: 41 DQGPEW 46


>sp|TF2B3_HALSA|TRANSCRIPTION initiation factor IIB 3|Halobacterium salinarum (strain ATCC

Query: 4 DTGPDW 9
D GP+W
Sbjct: 55 DHGPEW 60


>sp|TF2B_METS3|TRANSCRIPTION initiation factor IIB|Methanobrevibacter smithii (strain ATCC

Query: 4 DTGPDW 9
D GP+W
Sbjct: 46 DMGPEW 51


>sp|DPCKG_AERPE|GTP-DEPENDENT dephospho-CoA kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ATDTGPDWT 10
A D G DWT
Sbjct: 135 ALDCGIDWT 143


>sp|TRUB_PYRFU|PROBABLE tRNA pseudouridine synthase B|Pyrococcus furiosus (strain ATCC

Query: 4 DTGPDW 9
+T PDW
Sbjct: 26 ETNPDW 31


>sp|MT872_AERPE|DNA (cytosine-5-)-methyltransferase M.ApeKI|Aeropyrum pernix (strain

Query: 6 GPDW 9
GPDW
Sbjct: 101 GPDW 104


>sp|COFC_METMA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LATDTGPDW 9
+ATD+G D+
Sbjct: 149 IATDSGQDF 157


>sp|TF2B2_HALSA|TRANSCRIPTION initiation factor IIB 2|Halobacterium salinarum (strain ATCC

Query: 4 DTGPDW 9
D GP+W
Sbjct: 63 DRGPEW 68


>sp|TF2B6_HALSA|TRANSCRIPTION initiation factor IIB 6|Halobacterium salinarum (strain ATCC

Query: 4 DTGPDW 9
D GP+W
Sbjct: 56 DRGPEW 61


>sp|TF2B2_HALVD|TRANSCRIPTION initiation factor IIB 2|Haloferax volcanii (strain ATCC 29605

Query: 4 DTGPDW 9
D GP+W
Sbjct: 68 DRGPEW 73




53|SequenceR|270|261|QKSWGLATDT

>sp|Y868_METJA|UNCHARACTERIZED protein MJ0868|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WGLATDT 10
WG+ TDT
Sbjct: 48 WGIITDT 54


>sp|HIS8_METAR|HISTIDINOL-PHOSPHATE aminotransferase|Methanocella arvoryzae (strain DSM 22066

Query: 2 KSWGLA 7
K+WGLA
Sbjct: 221 KAWGLA 226


>sp|ILVC_PYRAE|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum aerophilum (strain ATCC

Query: 2 KSWGLAT 8
KSW LAT
Sbjct: 52 KSWELAT 58


>sp|COFD_METAC|2-PHOSPHO-L-LACTATE transferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QKSWGLATDT 10
+K WG+ DT
Sbjct: 61 KKWWGIENDT 70


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 3 SWGLATD 9
SWG TD
Sbjct: 309 SWGKVTD 315




54|SequenceR|275|266|YSQSPQKSWG

>sp|FRHB_METBF|COENZYME F420 hydrogenase subunit beta|Methanosarcina barkeri (strain

Query: 1 YSQSPQKSW 9
YS SPQ SW
Sbjct: 80 YSISPQISW 88


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 PQKSW 9
PQKSW
Sbjct: 88 PQKSW 92


>sp|PELO_PYRNV|PROTEIN pelota homolog|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 QSPQKSW 9
+SP+K+W
Sbjct: 286 ESPEKAW 292


>sp|HIS3_METMJ|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 YSQSPQKSW 9
YS+S QK W
Sbjct: 45 YSRSRQKLW 53


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 PQKSW 9
PQKSW
Sbjct: 91 PQKSW 95


>sp|FAEHP_METAR|BIFUNCTIONAL enzyme Fae/Hps|Methanocella arvoryzae (strain DSM 22066

Query: 2 SQSPQKSWG 10
SQS + +WG
Sbjct: 313 SQSAEHAWG 321


>sp|RL3_METBF|LARGE ribosomal subunit protein uL3|Methanosarcina barkeri (strain Fusaro

Query: 2 SQSPQKSWG 10
+Q P K WG
Sbjct: 210 TQGPAKRWG 218


>sp|PRIS_THEAC|DNA primase small subunit PriS|Thermoplasma acidophilum (strain ATCC

Query: 5 PQKSWG 10
P+K WG
Sbjct: 74 PEKEWG 79


>sp|RL3_PYRAB|LARGE ribosomal subunit protein uL3|Pyrococcus abyssi (strain GE5 /

Query: 2 SQSPQKSWG 10
+Q P K WG
Sbjct: 227 TQGPVKRWG 235


>sp|RL3_THEGJ|LARGE ribosomal subunit protein uL3|Thermococcus gammatolerans (strain

Query: 2 SQSPQKSWG 10
+Q P K WG
Sbjct: 210 TQGPVKRWG 218


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 3 QSPQKSW 9
+SPQ SW
Sbjct: 897 KSPQPSW 903


>sp|RL3_PYRFU|LARGE ribosomal subunit protein uL3|Pyrococcus furiosus (strain ATCC

Query: 2 SQSPQKSWG 10
+Q P K WG
Sbjct: 230 TQGPVKRWG 238


>sp|RL3_PYRHO|LARGE ribosomal subunit protein uL3|Pyrococcus horikoshii (strain ATCC

Query: 2 SQSPQKSWG 10
+Q P K WG
Sbjct: 228 TQGPVKRWG 236


>sp|RL3_THESM|LARGE ribosomal subunit protein uL3|Thermococcus sibiricus (strain DSM

Query: 2 SQSPQKSWG 10
+Q P K WG
Sbjct: 225 TQGPVKRWG 233


>sp|RL3_THEKO|LARGE ribosomal subunit protein uL3|Thermococcus kodakarensis (strain

Query: 2 SQSPQKSWG 10
+Q P K WG
Sbjct: 210 TQGPVKRWG 218


>sp|RL3_METHJ|LARGE ribosomal subunit protein uL3|Methanospirillum hungatei JF-1

Query: 2 SQSPQKSWG 10
+Q P K WG
Sbjct: 210 TQGPVKRWG 218


>sp|RL3_THEON|LARGE ribosomal subunit protein uL3|Thermococcus onnurineus (strain NA1)

Query: 2 SQSPQKSWG 10
+Q P K WG
Sbjct: 210 TQGPVKRWG 218


>sp|RL3_METAC|LARGE ribosomal subunit protein uL3|Methanosarcina acetivorans (strain

Query: 2 SQSPQKSWG 10
+Q P K WG
Sbjct: 210 TQGPVKRWG 218


>sp|PIMT_KORCO|PROTEIN-L-ISOASPARTATE O-methyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 SQSPQKSWG 10
S SP WG
Sbjct: 98 SDSPPSRWG 106


>sp|RL3_METTP|LARGE ribosomal subunit protein uL3|Methanothrix thermoacetophila (strain

Query: 2 SQSPQKSWG 10
+Q P K WG
Sbjct: 206 TQGPVKRWG 214


>sp|RL3_METBU|LARGE ribosomal subunit protein uL3|Methanococcoides burtonii (strain DSM

Query: 2 SQSPQKSWG 10
+Q P K WG
Sbjct: 210 TQGPVKRWG 218


>sp|RL3_METMA|LARGE ribosomal subunit protein uL3|Methanosarcina mazei (strain ATCC

Query: 2 SQSPQKSWG 10
+Q P K WG
Sbjct: 210 TQGPVKRWG 218


>sp|RL3_METB6|LARGE ribosomal subunit protein uL3|Methanoregula boonei (strain DSM

Query: 2 SQSPQKSWG 10
+Q P K WG
Sbjct: 210 TQGPVKRWG 218


>sp|RL3_METPE|LARGE ribosomal subunit protein uL3|Methanosphaerula palustris (strain

Query: 2 SQSPQKSWG 10
+Q P K WG
Sbjct: 210 TQGPVKRWG 218


>sp|RL3_ARCFU|LARGE ribosomal subunit protein uL3|Archaeoglobus fulgidus (strain ATCC

Query: 3 QSPQKSWG 10
Q P K WG
Sbjct: 204 QGPVKRWG 211


>sp|RL3_META3|LARGE ribosomal subunit protein uL3|Methanococcus aeolicus (strain ATCC

Query: 3 QSPQKSWG 10
Q P K WG
Sbjct: 206 QGPVKRWG 213




55|SequenceR|280|271|SEFLTYSQSP

>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EFLTYSQSP 10
E L+Y++SP
Sbjct: 93 EILSYARSP 101


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 EFLTYSQSP 10
E +TY +SP
Sbjct: 180 ESITYKESP 188


>sp|Y856_PYRHO|UNCHARACTERIZED protein PH0856|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SEFLTYSQ 8
SEF+T+S+
Sbjct: 159 SEFVTFSE 166




56|SequenceR|285|276|KEGSFSEFLT

>sp|MTAP_CENSY|S-METHYL-5'-THIOADENOSINE phosphorylase|Cenarchaeum symbiosum (strain A)

Query: 1 KEGSFSE 7
+EGSFSE
Sbjct: 96 REGSFSE 102


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EGSFSEFL 9
+GSFS+F+
Sbjct: 1743 QGSFSQFI 1750


>sp|TRM1_PYRCJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum calidifontis

Query: 1 KEGSFSEFL 9
+EG +S+FL
Sbjct: 280 REGQYSDFL 288


>sp|DNAG_METVS|DNA primase DnaG|Methanococcus vannielii (strain ATCC 35089

Query: 1 KEGSFSEFLT 10
K SF EFLT
Sbjct: 378 KTNSFKEFLT 387


>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 2 EGSFSEFL 9
EG+F EF+
Sbjct: 197 EGTFEEFM 204


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KEGSFSEFL 9
K+G SEF+
Sbjct: 858 KDGQLSEFI 866


>sp|DNAG_METM5|DNA primase DnaG|Methanococcus maripaludis (strain C5 /

Query: 1 KEGSFSEFLT 10
K +F EFLT
Sbjct: 373 KTNTFKEFLT 382


>sp|DNAG_METM6|DNA primase DnaG|Methanococcus maripaludis (strain C6 /

Query: 1 KEGSFSEFLT 10
K +F EFLT
Sbjct: 373 KTNTFKEFLT 382


>sp|TVOK_THEVO|CALCIUM-GATED potassium channel TvoK|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GSFSEFLT 10
GS+ EFLT
Sbjct: 33 GSYLEFLT 40


>sp|GCH1L_METJA|GTP cyclohydrolase 1 type 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EGSFSEFL 9
+GSF EFL
Sbjct: 136 KGSFEEFL 143


>sp|T2MW_METWO|TYPE II restriction enzyme MwoI|Methanothermobacter wolfeii

Query: 2 EGSFSEFLT 10
EGS EFL
Sbjct: 212 EGSLEEFLN 220


>sp|DNAG_METMP|DNA primase DnaG|Methanococcus maripaludis (strain DSM 14266

Query: 1 KEGSFSEFLT 10
K +F EFLT
Sbjct: 371 KTNTFKEFLT 380


>sp|DNAG_METM7|DNA primase DnaG|Methanococcus maripaludis (strain C7 /

Query: 1 KEGSFSEFLT 10
K +F EFLT
Sbjct: 374 KTNTFKEFLT 383


>sp|YF7B_METJA|UNCHARACTERIZED protein MJ1572.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KEGSFSEFL 9
K G+F+EFL
Sbjct: 90 KCGTFNEFL 98




57|SequenceR|290|281|HTCLKKEGSF

>sp|DPCKG_AERPE|GTP-DEPENDENT dephospho-CoA kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 HTCLKKEG 8
H CL+K G
Sbjct: 157 HRCLRKPG 164


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 HTCLKKEG 8
H LKKEG
Sbjct: 193 HYILKKEG 200


>sp|TRPB_METLZ|TRYPTOPHAN synthase beta chain|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 CLKKEG 8
CL+KEG
Sbjct: 215 CLEKEG 220


>sp|RNZ_CENSY|RIBONUCLEASE Z|Cenarchaeum symbiosum (strain A)

Query: 2 TCLKKEG 8
TCLK EG
Sbjct: 22 TCLKVEG 28


>sp|GLNB1_METBA|NITROGEN fixation nifHD1 region GlnB-like|Methanosarcina barkeri

Query: 3 CLKKEG 8
CL+KEG
Sbjct: 19 CLEKEG 24




58|SequenceR|295|286|NCWNKHTCLK

>sp|TOP6A_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 3 WNKHTCL 9
W+KH C+
Sbjct: 211 WDKHNCI 217


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 3 WNKHTCLK 10
W++H+C K
Sbjct: 51 WSEHSCYK 58


>sp|GLMU_METJA|BIFUNCTIONAL protein GlmU|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NCWNKHTCL 9
NCW +CL
Sbjct: 377 NCWIGASCL 385


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WNKHTCLK 10
W++H C K
Sbjct: 66 WSEHCCYK 73


>sp|Y1807_METBF|PROTEIN Mbar_A1807|Methanosarcina barkeri (strain Fusaro /

Query: 6 HTCLK 10
HTCLK
Sbjct: 159 HTCLK 163


>sp|Y1344_METBU|PROTEIN Mbur_1344|Methanococcoides burtonii (strain DSM 6242

Query: 6 HTCLK 10
HTCLK
Sbjct: 155 HTCLK 159


>sp|LEUC_HALLT|3-ISOPROPYLMALATE dehydratase large subunit|Halorubrum lacusprofundi (strain ATCC

Query: 3 WNKHTCLK 10
W++HT K
Sbjct: 11 WDRHTVTK 18


>sp|Y2154_ARCFU|UPF0179 protein AF_2154|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NCWNKHTCLK 10
NC K TCLK
Sbjct: 34 NCKIKKTCLK 43


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 NCWNKHTC 8
N W K TC
Sbjct: 15 NGWIKRTC 22


>sp|GUAAA_SULTO|GMP synthase [glutamine-hydrolyzing] subunit A|Sulfurisphaera tokodaii

Query: 1 NCWNKHT 7
N W HT
Sbjct: 123 NAWESHT 129




59|SequenceR|300|291|QTIQWNCWNK

>sp|Y672_PYRHO|UPF0252 protein PH0672|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TIQWNCWN 9
TI+W WN
Sbjct: 61 TIEWKIWN 68


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 1 QTIQWNCWNK 10
Q I W W K
Sbjct: 400 QKISWRAWEK 409


>sp|NADA_HALMA|QUINOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QTIQWNCWN 9
+T++W+ W+
Sbjct: 207 ETVEWDPWD 215


>sp|Y1094_HALWD|PUTATIVE heme-binding protein HQ_1094A|Haloquadratum walsbyi (strain DSM

Query: 1 QTIQWNCWNK 10
+T+ W+ W +
Sbjct: 18 RTVDWDAWRE 27


>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 2 TIQWNCW 8
T QWN W
Sbjct: 5 TPQWNDW 11


>sp|DAPF_METMP|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain DSM 14266

Query: 2 TIQWNCWNK 10
TI+WN ++K
Sbjct: 251 TIEWNEFDK 259


>sp|Y2021_HALSA|PUTATIVE heme-binding protein VNG_2021C|Halobacterium salinarum (strain

Query: 2 TIQWNCW 8
T+ W+ W
Sbjct: 19 TVDWDAW 25


>sp|QUEC_PICTO|7-CYANO-7-DEAZAGUANINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 3 IQWNCWN 9
+ W+C+N
Sbjct: 184 LTWSCYN 190


>sp|MCRY_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 QTIQWNCWN 9
+ I W WN
Sbjct: 295 EPIDWALWN 303


>sp|Y3100_HALMA|PUTATIVE heme-binding protein rrnAC3100|Haloarcula marismortui (strain

Query: 1 QTIQWNCWNK 10
++I W+ W +
Sbjct: 20 RSIDWDAWRE 29


>sp|OFOB1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Sulfurisphaera tokodaii (strain

Query: 4 QWNCW 8
QWN W
Sbjct: 7 QWNDW 11


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QTIQWNCWNK 10
Q I W W K
Sbjct: 457 QNILWENWRK 466


>sp|OFOB_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Saccharolobus solfataricus

Query: 3 IQWNCW 8
++WN W
Sbjct: 6 VEWNDW 11


>sp|Y611_ARCFU|UNCHARACTERIZED protein AF_0611|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 NCWN 9
NCWN
Sbjct: 107 NCWN 110




60|SequenceR|305|296|TEQSDQTIQW

>sp|ENDA_HALSA|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 700922

Query: 1 TEQSDQTIQW 10
T+ +D TI+W
Sbjct: 326 TDDTDDTIRW 335


>sp|ENDA_HALS3|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 29341

Query: 1 TEQSDQTIQW 10
T+ +D TI+W
Sbjct: 326 TDDTDDTIRW 335


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 TEQSDQTIQW 10
T+Q+D TI W
Sbjct: 378 TKQADATISW 387


>sp|SYE_PYRHO|GLUTAMATE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EQSDQTIQW 10
++SD TI W
Sbjct: 385 KKSDATISW 393


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 EQSDQTIQW 10
++SD TI W
Sbjct: 386 KRSDTTISW 394


>sp|SYE_THEKO|GLUTAMATE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EQSDQTIQW 10
++SD TI W
Sbjct: 387 KRSDTTISW 395


>sp|IF6_PYRHO|TRANSLATION initiation factor 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EQSDQTIQW 10
E SD+ ++W
Sbjct: 166 ETSDEELEW 174


>sp|IF6_PYRAB|TRANSLATION initiation factor 6|Pyrococcus abyssi (strain GE5 /

Query: 2 EQSDQTIQW 10
E SD+ ++W
Sbjct: 166 EASDEELEW 174


>sp|SYE_PYRAB|GLUTAMATE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 EQSDQTIQW 10
++SD T+ W
Sbjct: 386 KKSDATVSW 394


>sp|SYE_PYRFU|GLUTAMATE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EQSDQTIQW 10
++SD T+ W
Sbjct: 387 KKSDATVSW 395




61|SequenceR|310|301|LTFNYTEQSD

>sp|XACG_HALVD|XYLOSE/ARABINOSE-BINDING protein XacG|Haloferax volcanii (strain ATCC 29605

Query: 2 TFNYTEQSD 10
+FNY EQ D
Sbjct: 325 SFNYKEQWD 333


>sp|QUEC_METST|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LTFNYTEQS 9
+TFNY +QS
Sbjct: 31 ITFNYGQQS 39


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 TFNYTEQSD 10
T NY EQ D
Sbjct: 544 TLNYPEQED 552


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 3 FNYTEQSD 10
FNY E+ D
Sbjct: 297 FNYEEEED 304


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 3 FNYTEQSD 10
FNY E+ D
Sbjct: 297 FNYEEEED 304


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 3 FNYTEQSD 10
FNY E+ D
Sbjct: 297 FNYEEEED 304


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 3 FNYTEQSD 10
FNY E+ D
Sbjct: 297 FNYEEEED 304


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TFNYTEQSD 10
TF YT QS
Sbjct: 746 TFTYTAQSG 754


>sp|QUEC_METS3|7-CYANO-7-DEAZAGUANINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LTFNYTEQS 9
+TFNY ++S
Sbjct: 32 ITFNYGQKS 40




62|SequenceR|315|306|YNEAILTFNY

>sp|Y774_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0774|Methanocaldococcus

Query: 1 YNEAILTF 8
Y E ILTF
Sbjct: 205 YEEGILTF 212


>sp|SYK_METMI|LYSINE--TRNA ligase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 YNEAILT 7
YNEAI+T
Sbjct: 134 YNEAIIT 140


>sp|AROD_THEVO|3-DEHYDROQUINATE dehydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YNEAILTFNY 10
YN+A FNY
Sbjct: 219 YNKAFSLFNY 228




63|SequenceR|320|311|SRKRLYNEAI

>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SRKRLYNEA 9
+RKR +NEA
Sbjct: 727 TRKRAWNEA 735


>sp|RIO1_ARCFU|RIO-TYPE serine/threonine-protein kinase Rio1|Archaeoglobus fulgidus (strain

Query: 3 KRLYNEA 9
KRLY EA
Sbjct: 184 KRLYQEA 190




64|SequenceR|325|316|FLINVSRKRL

>sp|DGGGP_PYRFU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FLINVSRK 8
FL+NVSR+
Sbjct: 164 FLVNVSRE 171


>sp|DGGGP_PYRAB|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 FLINVSRK 8
FL+NVSR+
Sbjct: 164 FLVNVSRE 171


>sp|DGGGP_PYRHO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FLINVSRK 8
FL+NVSR+
Sbjct: 164 FLVNVSRE 171


>sp|Y1859_ARCFU|UNCHARACTERIZED protein AF_1859|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FLINVSRKRL 10
FLI++ R+RL
Sbjct: 192 FLIHIVRRRL 201


>sp|DGGGP_THEON|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus onnurineus (strain NA1)

Query: 1 FLINVSRK 8
FL+NV+R+
Sbjct: 164 FLVNVARE 171


>sp|Y956_METJA|UNCHARACTERIZED protein MJ0956|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 INVSRKRL 10
+NVSR+RL
Sbjct: 139 LNVSRERL 146


>sp|DGGGP_THESM|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 FLINVSRK 8
FL+NV+R+
Sbjct: 164 FLVNVARE 171


>sp|DGGGP_THEKO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FLINVSRK 8
FL+NV+R+
Sbjct: 164 FLVNVARE 171


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FLINVSRK 8
F INV+RK
Sbjct: 200 FAINVARK 207


>sp|Y164_METJA|UNCHARACTERIZED protein MJ0164|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 INVSRKRL 10
+NV RKR+
Sbjct: 351 VNVKRKRI 358


>sp|TRUD_PICTO|PROBABLE tRNA pseudouridine synthase D|Picrophilus torridus (strain ATCC

Query: 3 INVSRKRL 10
+N+SRKR+
Sbjct: 76 MNISRKRI 83


>sp|DGGGP_THEGJ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FLINVSRK 8
FL+NV+R+
Sbjct: 164 FLVNVARE 171




65|SequenceR|330|321|RHTLNFLINV

>sp|RS5_PICTO|SMALL ribosomal subunit protein uS5|Picrophilus torridus (strain ATCC

Query: 2 HTLNFLIN 9
HTL FL+N
Sbjct: 124 HTLPFLVN 131


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 2 HTLNFLIN 9
HT NF++N
Sbjct: 645 HTFNFVMN 652


>sp|MTXH_METMA|PUTATIVE methyltransferase mtx subunit H|Methanosarcina mazei (strain ATCC

Query: 1 RHTLNFLI 8
RH +NFL+
Sbjct: 303 RHPINFLV 310


>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 1 RHTLNFLIN 9
RHTL LIN
Sbjct: 422 RHTLEALIN 430




66|SequenceR|335|326|NMLYVRHTLN

>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 2 MLYVRHTLN 10
+ +VRH LN
Sbjct: 599 LAFVRHVLN 607


>sp|NADA_PYRFU|QUINOLINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NMLYVRHTL 9
NML V+H L
Sbjct: 91 NMLKVKHIL 99


>sp|COFC_METBU|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 NMLYVRH 7
N+L++RH
Sbjct: 124 NILFIRH 130


>sp|T2MZ_METTF|TYPE II restriction enzyme MthZI|Methanothermobacter thermautotrophicus

Query: 3 LYVRHTLN 10
LY+ H LN
Sbjct: 194 LYIYHNLN 201


>sp|GSA_SACI7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 MLYVRHTLN 10
+L ++HT+N
Sbjct: 341 LLKIKHTIN 349


>sp|GSA_SACI6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 MLYVRHTLN 10
+L ++HT+N
Sbjct: 341 LLKIKHTIN 349


>sp|GSA_SACI4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 MLYVRHTLN 10
+L ++HT+N
Sbjct: 341 LLKIKHTIN 349


>sp|GSA_SACI3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.27)

Query: 2 MLYVRHTLN 10
+L ++HT+N
Sbjct: 341 LLKIKHTIN 349


>sp|GSA_SACI2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 MLYVRHTLN 10
+L ++HT+N
Sbjct: 341 LLKIKHTIN 349


>sp|GSA_SACI1|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 MLYVRHTLN 10
+L ++HT+N
Sbjct: 341 LLKIKHTIN 349




67|SequenceR|340|331|NVSFPNMLYV

>sp|RPO2N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanococcus vannielii (strain ATCC

Query: 1 NVSFPNM 7
NVSFP M
Sbjct: 209 NVSFPGM 215


>sp|AROA_METST|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 NVSFPNMLYV 10
++SFPN L V
Sbjct: 410 DISFPNFLEV 419


>sp|METXA_METRM|HOMOSERINE O-acetyltransferase|Methanobrevibacter ruminantium (strain ATCC

Query: 2 VSFPNML 8
VS+PNM+
Sbjct: 163 VSYPNMM 169


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NVSFPNMLYV 10
N+ FP + YV
Sbjct: 75 NIRFPAIFYV 84


>sp|AROA_METS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 NVSFPNML 8
+VSFPN +
Sbjct: 418 DVSFPNFI 425


>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VSFPNMLY 9
+SFP M Y
Sbjct: 453 ISFPGMRY 460


>sp|BRIX_PYRFU|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus furiosus

Query: 4 FPNMLYV 10
FPN LY+
Sbjct: 25 FPNSLYL 31


>sp|BRIX_PYRAB|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus abyssi

Query: 4 FPNMLYV 10
FPN LY+
Sbjct: 25 FPNSLYM 31


>sp|SYY_NANEQ|TYROSINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 NVSFPNMLYV 10
++SF +LYV
Sbjct: 162 SISFAQLLYV 171


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 1 NVSFPNML 8
N +FPN+L
Sbjct: 668 NKNFPNLL 675


>sp|BRIX_THEKO|PROBABLE Brix domain-containing ribosomal biogenesis|Thermococcus

Query: 4 FPNMLYV 10
FPN LY+
Sbjct: 25 FPNSLYL 31


>sp|Y2147_ARCFU|UNCHARACTERIZED protein AF_2147|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VSFPNML 8
+SFP+ML
Sbjct: 19 ISFPDML 25


>sp|CBIJ_METJA|COBALT-PRECORRIN-6A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VSFPNMLYV 10
++ PN++YV
Sbjct: 105 INHPNIIYV 113




68|SequenceR|345|336|NVNEFNVSFP

>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 VNEFNVSFP 10
V+EFN +FP
Sbjct: 338 VSEFNCTFP 346


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 NVNEFNVSFP 10
N ++NV FP
Sbjct: 424 NWRQYNVDFP 433


>sp|TRPD_METJA|ANTHRANILATE phosphoribosyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 NVNEFNVS 8
N+N FN+S
Sbjct: 85 NLNTFNIS 92


>sp|Y1397_METJA|UNCHARACTERIZED protein MJ1397|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FNVSFP 10
FN+SFP
Sbjct: 118 FNISFP 123




69|SequenceR|350|341|IANTANVNEF

>sp|SFSA_PYRFU|SUGAR fermentation stimulation protein homolog|Pyrococcus furiosus

Query: 1 IANTANVNEF 10
I NT +NEF
Sbjct: 36 ITNTGRLNEF 45


>sp|TF2B3_HALSA|TRANSCRIPTION initiation factor IIB 3|Halobacterium salinarum (strain ATCC 700922

Query: 1 IANTANVNE 9
+AN ANV E
Sbjct: 291 VANVANVTE 299


>sp|ARGJ_METMA|GLUTAMATE N-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IANTANVNEF 10
IAN+ N N F
Sbjct: 66 IANSGNANAF 75


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IANTANVNEF 10
IAN+ N N F
Sbjct: 66 IANSGNANAF 75


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 IANTANVNEF 10
+ANTAN +F
Sbjct: 657 LANTANSFDF 666


>sp|RSMA_PYRHO|PROBABLE ribosomal RNA small subunit|Pyrococcus horikoshii (strain ATCC

Query: 4 TANVNE 9
TANVNE
Sbjct: 37 TANVNE 42




70|SequenceR|355|346|VKWTMIANTA

>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 WTMIANT 9
WT++ANT
Sbjct: 227 WTIVANT 233


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WTMIANTA 10
WT++AN A
Sbjct: 227 WTLVANLA 234


>sp|SYFB_SULAC|PHENYLALANINE--TRNA ligase beta subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KWTMIAN 8
KWT+I N
Sbjct: 8 KWTLINN 14


>sp|SYH_THEKO|HISTIDINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VKWTMIAN 8
+KW IAN
Sbjct: 99 IKWYYIAN 106


>sp|SYH_PYRHO|HISTIDINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VKWTMIAN 8
+KW IAN
Sbjct: 97 IKWYYIAN 104


>sp|SYH_PYRFU|HISTIDINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VKWTMIAN 8
+KW IAN
Sbjct: 97 IKWYYIAN 104


>sp|SYH_PYRAB|HISTIDINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 VKWTMIAN 8
+KW IAN
Sbjct: 97 IKWYYIAN 104




71|SequenceR|360|351|NRISHVKWTM

>sp|TDXH_IGNH4|PEROXIREDOXIN hospitalis (strain KIN4/I /

Query: 1 NRISHVKW 8
N SH+KW
Sbjct: 76 NSFSHIKW 83


>sp|KTHY1_SULTO|PROBABLE thymidylate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NRISHVKWTM 10
+R H+KW M
Sbjct: 66 DRAFHIKWIM 75


>sp|TDXH_SACS2|PEROXIREDOXIN solfataricus (strain ATCC 35092

Query: 1 NRISHVKWTM 10
+ ISH++W M
Sbjct: 77 SNISHIEWIM 86


>sp|TDXH2_SULTO|PEROXIREDOXIN 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 ISHVKWTM 10
ISH++W M
Sbjct: 79 ISHIEWVM 86


>sp|TDXH1_SULTO|PEROXIREDOXIN 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 SHVKWTM 10
SH++W M
Sbjct: 77 SHIQWLM 83


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 3 ISHVKW 8
I+HV+W
Sbjct: 69 IAHVRW 74


>sp|TDXH1_PICTO|PEROXIREDOXIN 1|Picrophilus torridus (strain ATCC 700027

Query: 1 NRISHVKW 8
++ISH++W
Sbjct: 76 SKISHIEW 83


>sp|PUS10_THEAM|TRNA pseudouridine synthase Pus10|Thermosphaera aggregans (strain DSM

Query: 3 ISHVKW 8
ISHV W
Sbjct: 224 ISHVPW 229


>sp|TDXH_METTH|PEROXIREDOXIN thermautotrophicus (strain ATCC 29096

Query: 4 SHVKW 8
SH+KW
Sbjct: 75 SHIKW 79


>sp|RL3_METH6|LARGE ribosomal subunit protein uL3|Methanothrix harundinacea (strain

Query: 5 HVKWTM 10
HV+WT+
Sbjct: 242 HVRWTV 247


>sp|RPO10_PYRNV|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum neutrophilum (strain DSM

Query: 3 ISHVKW 8
+SHV+W
Sbjct: 50 LSHVEW 55


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 4 SHVKW 8
SH+KW
Sbjct: 75 SHIKW 79


>sp|TDXH_HYPBU|PEROXIREDOXIN butylicus (strain DSM 5456

Query: 4 SHVKW 8
SH+KW
Sbjct: 79 SHIKW 83


>sp|TDXH_ARCFU|PEROXIREDOXIN fulgidus (strain ATCC 49558

Query: 4 SHVKW 8
SH+KW
Sbjct: 76 SHIKW 80


>sp|TDXH_THEKO|PEROXIREDOXIN kodakarensis (strain ATCC BAA-918

Query: 4 SHVKW 8
SH+KW
Sbjct: 77 SHIKW 81


>sp|TDXH_METVS|PEROXIREDOXIN vannielii (strain ATCC 35089

Query: 4 SHVKW 8
SH+KW
Sbjct: 77 SHIKW 81


>sp|Y1246_PYRAB|UNCHARACTERIZED protein PYRAB12460|Pyrococcus abyssi (strain GE5 /

Query: 1 NRISHVKWT 9
N ++HV W+
Sbjct: 151 NFLAHVSWS 159


>sp|TDXH_METM5|PEROXIREDOXIN maripaludis (strain C5 /

Query: 4 SHVKW 8
SH+KW
Sbjct: 77 SHIKW 81


>sp|TDXH_METMP|PEROXIREDOXIN maripaludis (strain DSM 14266

Query: 4 SHVKW 8
SH+KW
Sbjct: 77 SHIKW 81


>sp|TDXH_PYRHO|PEROXIREDOXIN horikoshii (strain ATCC 700860

Query: 4 SHVKW 8
SH+KW
Sbjct: 77 SHIKW 81


>sp|TDXH_NANEQ|PEROXIREDOXIN equitans (strain Kin4-M)

Query: 4 SHVKW 8
SH+KW
Sbjct: 75 SHIKW 79


>sp|TDXH_AERPE|PEROXIREDOXIN pernix (strain ATCC 700893

Query: 4 SHVKW 8
SH+KW
Sbjct: 81 SHIKW 85




72|SequenceR|365|356|LYTFNNRISH

>sp|FENR_PICTO|FERREDOXIN--NADP reductase|Picrophilus torridus (strain ATCC 700027

Query: 3 TFNNRI 8
TFNNRI
Sbjct: 75 TFNNRI 80


>sp|PNCB_METAC|NICOTINATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 YTFNNRISH 10
Y F NR SH
Sbjct: 30 YRFTNRGSH 38


>sp|COFD_METMP|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LYTFNNRIS 9
LYTF+N I+
Sbjct: 53 LYTFSNLIN 61


>sp|AROB_PICTO|3-DEHYDROQUINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 4 FNNRISH 10
FNN ISH
Sbjct: 239 FNNNISH 245


>sp|VHTC_METMA|F420 non-reducing hydrogenase II cytochrome|Methanosarcina mazei

Query: 2 YTFNNRISH 10
YT +RI+H
Sbjct: 15 YTITDRIAH 23


>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 2 YTFNNRISH 10
Y NN +SH
Sbjct: 360 YVLNNFLSH 368




73|SequenceR|370|361|LEIQCLYTFN

>sp|Y120_METJA|UNCHARACTERIZED protein MJ0120|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEIQCLYT 8
++I CLYT
Sbjct: 35 VKIDCLYT 42


>sp|TRPF_METAC|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EIQCLYTF 9
E++C Y F
Sbjct: 230 EVRCTYAF 237


>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IQCLYTFN 10
++C+YT N
Sbjct: 475 VKCIYTGN 482




74|SequenceR|375|366|KGEGHLEIQC

>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GEGHLEIQC 10
GEG EI+C
Sbjct: 55 GEGFAEIEC 63


>sp|IF1A_ARCFU|TRANSLATION initiation factor 1A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GEGHLEIQC 10
G GH++++C
Sbjct: 29 GAGHIKVRC 37


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 KGEGHLEIQ 9
+GE HLE+Q
Sbjct: 438 QGELHLEVQ 446


>sp|EF2_HALSA|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 KGEGHLEIQ 9
+GE HLE+Q
Sbjct: 437 QGELHLEVQ 445


>sp|EF2_HALS3|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 29341

Query: 1 KGEGHLEIQ 9
+GE HLE+Q
Sbjct: 437 QGELHLEVQ 445


>sp|CBIA_METM5|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C5 /

Query: 1 KGEGHL 6
+GEGHL
Sbjct: 152 RGEGHL 157


>sp|CBIA_METM7|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C7 /

Query: 1 KGEGHL 6
+GEGHL
Sbjct: 152 RGEGHL 157


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KGEGHLE 7
KGE HLE
Sbjct: 798 KGEPHLE 804


>sp|MOAC_THEVO|PROBABLE cyclic pyranopterin monophosphate synthase|Thermoplasma volcanium

Query: 2 GEGHLEIQC 10
GE ++E+ C
Sbjct: 84 GENYVEVTC 92


>sp|PUS10_METTP|TRNA pseudouridine synthase Pus10|Methanothrix thermoacetophila (strain

Query: 3 EGHLEIQ 9
+GH+EIQ
Sbjct: 191 DGHVEIQ 197




75|SequenceR|380|371|NYQMMKGEGH

>sp|RL4_PYRAB|LARGE ribosomal subunit protein uL4|Pyrococcus abyssi (strain GE5 /

Query: 1 NYQMMKGEGH 10
NY ++K GH
Sbjct: 123 NYDIVKARGH 132


>sp|RL4_PYRHO|LARGE ribosomal subunit protein uL4|Pyrococcus horikoshii (strain ATCC

Query: 1 NYQMMKGEGH 10
NY ++K GH
Sbjct: 123 NYDIVKSRGH 132


>sp|SYS_HALMA|SERINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 YQMMKGEG 9
YQ +KGEG
Sbjct: 167 YQFVKGEG 174


>sp|RL4_THEON|LARGE ribosomal subunit protein uL4|Thermococcus onnurineus (strain NA1)

Query: 1 NYQMMKGEGH 10
NY +++ GH
Sbjct: 123 NYDLVRARGH 132


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 1 NYQMMKGEGH 10
NY +++ GH
Sbjct: 123 NYDLVRARGH 132


>sp|RL4_PYRFU|LARGE ribosomal subunit protein uL4|Pyrococcus furiosus (strain ATCC

Query: 1 NYQMMKGEGH 10
NY +++ GH
Sbjct: 123 NYDLVRARGH 132


>sp|RL4_THESM|LARGE ribosomal subunit protein uL4|Thermococcus sibiricus (strain DSM

Query: 1 NYQMMKGEGH 10
NY +++ GH
Sbjct: 123 NYDLVRARGH 132


>sp|Y790_METJA|UNCHARACTERIZED protein MJ0790|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NYQMMKGEGH 10
NY++ K EG+
Sbjct: 198 NYKLRKKEGY 207


>sp|RPO11_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo11|Archaeoglobus fulgidus (strain ATCC

Query: 4 MMKGEGH 10
++KGEGH
Sbjct: 16 VIKGEGH 22


>sp|RL4_META3|LARGE ribosomal subunit protein uL4|Methanococcus aeolicus (strain ATCC

Query: 1 NYQMMKGEGH 10
N +M+K GH
Sbjct: 121 NIEMVKNRGH 130


>sp|MBD_THEAC|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma acidophilum (strain

Query: 3 QMMKGEGH 10
+MMK EG+
Sbjct: 44 EMMKSEGY 51


>sp|VORB_METTM|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter marburgensis

Query: 3 QMMKGEGH 10
Q++KG GH
Sbjct: 123 QLVKGGGH 130




76|SequenceR|385|376|VKISVNYQMM

>sp|S7C4_SACS2|REPRESSOR-LIKE protein SSo7c4|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VKISVNYQM 9
VK+S NYQ+
Sbjct: 7 VKVSRNYQV 15


>sp|S7C3_SACS2|REPRESSOR-LIKE protein SSo7c3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VKISVNYQM 9
VK+S NYQ+
Sbjct: 7 VKVSRNYQV 15




77|SequenceR|390|381|FYEGNVKISV

>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FYEGNVKISV 10
FYEG+V + V
Sbjct: 234 FYEGDVTVRV 243


>sp|SECG_AERPE|PREPROTEIN translocase subunit SecG|Aeropyrum pernix (strain ATCC 700893

Query: 2 YEGNVKIS 9
YEG +KIS
Sbjct: 26 YEGKIKIS 33


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 YEGNVKI 8
Y+GNVKI
Sbjct: 366 YKGNVKI 372


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EGNVKISV 10
EGNVK+S+
Sbjct: 510 EGNVKLSL 517


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YEGNVKISV 10
YEGNV I++
Sbjct: 544 YEGNVLINM 552


>sp|VHCA_METVO|F420-NON-REDUCING hydrogenase vhc subunit A|Methanococcus voltae

Query: 2 YEGNVKI 8
YEGN+++
Sbjct: 236 YEGNIRV 242


>sp|BRIX_METJA|PROBABLE Brix domain-containing ribosomal biogenesis|Methanocaldococcus

Query: 1 FYEGNVKI 8
FY+G VKI
Sbjct: 146 FYKGRVKI 153


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 3 EGNVKISV 10
EGNV ISV
Sbjct: 923 EGNVFISV 930


>sp|COBD_METMP|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 1 FYEGNVK 7
FY GNVK
Sbjct: 226 FYGGNVK 232


>sp|GATE_THEGJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus gammatolerans (strain DSM

Query: 2 YEGNVKIS 9
YEGN ++S
Sbjct: 73 YEGNYELS 80


>sp|RQCH_METJA|ARCHAEAL Rqc2 homolog aRqcH|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YEGNVKISV 10
Y+G+VKI+
Sbjct: 605 YDGDVKITT 613


>sp|COBD_METM7|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 1 FYEGNVKISV 10
FY GN+K ++
Sbjct: 226 FYGGNIKSAI 235


>sp|FMDC_METTM|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 2 YEGNVK 7
YEGN+K
Sbjct: 39 YEGNIK 44


>sp|FMDC_METTH|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 2 YEGNVK 7
YEGN+K
Sbjct: 39 YEGNIK 44


>sp|FMDC_METWO|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 2 YEGNVK 7
YEGN+K
Sbjct: 39 YEGNIK 44


>sp|COBD_METJA|PROBABLE cobalamin biosynthesis protein CobD|Methanocaldococcus jannaschii

Query: 1 FYEGNVKISV 10
FY+G+VK ++
Sbjct: 225 FYKGDVKKAI 234


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 YEGNVKISV 10
YEGNV +++
Sbjct: 545 YEGNVLLNM 553


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 1 FYEGNVKISV 10
FY G +K+SV
Sbjct: 1242 FYVGVIKLSV 1251




78|SequenceR|395|386|ELESLFYEGN

>sp|SFSA_METBU|SUGAR fermentation stimulation protein homolog|Methanococcoides

Query: 2 LESLFYEGN 10
LE L Y GN
Sbjct: 52 LEDLLYPGN 60


>sp|DPHB_PYRIL|DIPHTHINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ELESLFYE 8
E+E +FYE
Sbjct: 24 EVECIFYE 31


>sp|PGK2_PYRFU|2-PHOSPHOGLYCERATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ELESLFYE 8
ELE+ FYE
Sbjct: 221 ELEARFYE 228


>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ELESLFYEG 9
ELE +F EG
Sbjct: 308 ELERIFIEG 316


>sp|SYY_PYRAR|TYROSINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ELESLFYEG 9
ELE L+ EG
Sbjct: 320 ELEGLYREG 328


>sp|Y890_METTH|UPF0292 protein MTH_890|Methanothermobacter thermautotrophicus (strain

Query: 1 ELESLFYEG 9
ELE L Y+G
Sbjct: 12 ELEELKYQG 20




79|SequenceR|400|391|YETAPELESL

>sp|PSB2_IGNH4|PROTEASOME subunit beta 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YETAPELESL 10
++TAP L SL
Sbjct: 117 FDTAPRLYSL 126


>sp|ARCH_METAC|PROTEIN archease|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 TAPELESL 10
T+P+LESL
Sbjct: 58 TSPDLESL 65


>sp|ARCH_METMA|PROTEIN archease|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 TAPELESL 10
T+P+LESL
Sbjct: 58 TSPDLESL 65


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 3 TAPELESL 10
TAPELE++
Sbjct: 317 TAPELENV 324


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 3 TAPELESL 10
TAPELE++
Sbjct: 317 TAPELENV 324


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 3 TAPELESL 10
TAPELE++
Sbjct: 318 TAPELENV 325


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 YETAPELESL 10
YE P++ES+
Sbjct: 397 YELRPQVESI 406




80|SequenceR|405|396|RVRAMYETAP

>sp|HIS8_METAC|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VRAMYETAP 10
VRA+ ETAP
Sbjct: 57 VRALVETAP 65


>sp|DNLI_META3|DNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 RVRAMYETAP 10
RVR MY+ P
Sbjct: 419 RVRTMYKFKP 428


>sp|SRP54_META3|SIGNAL recognition particle 54 kDa|Methanococcus aeolicus (strain ATCC

Query: 3 RAMYETAP 10
+A+YE+AP
Sbjct: 58 KAIYESAP 65


>sp|DNLI_METM6|DNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 RVRAMYETAP 10
RV+ MY+ P
Sbjct: 432 RVKTMYKVKP 441


>sp|DNLI_METMP|DNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RVRAMYETAP 10
RV+ MY+ P
Sbjct: 432 RVKTMYKVKP 441


>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RVRAMYETA 9
RVR +YE A
Sbjct: 270 RVRELYEEA 278


>sp|DNLI_METM7|DNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 RVRAMYETAP 10
RV+ MY+ P
Sbjct: 432 RVKTMYKVKP 441


>sp|DNLI_METM5|DNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 RVRAMYETAP 10
RV+ MY+ P
Sbjct: 432 RVKTMYKVKP 441


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RVRAMYETAP 10
RVR MY+ P
Sbjct: 432 RVRTMYKFKP 441


>sp|TIAS_PYRNV|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrobaculum neutrophilum

Query: 2 VRAMYETAP 10
+R +Y+TAP
Sbjct: 370 IRWLYDTAP 378


>sp|FAU1_CALMQ|PROBABLE ribonuclease FAU-1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 RVRAMYETA 9
RVR +Y TA
Sbjct: 5 RVRGIYATA 13


>sp|GPMA_METVS|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC 35089

Query: 3 RAMYETAP 10
R YETAP
Sbjct: 137 RRSYETAP 144


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 1 RVRAMYETA 9
RVR +Y TA
Sbjct: 10 RVRGIYSTA 18


>sp|RFRNP_METVS|RNA-FREE ribonuclease P|Methanococcus vannielii (strain ATCC 35089

Query: 4 AMYETA 9
AMYETA
Sbjct: 119 AMYETA 124


>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RVRAMYETA 9
R+R +Y TA
Sbjct: 10 RIRGIYSTA 18


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RVRAMYETA 9
R+R +Y TA
Sbjct: 10 RIRGIYSTA 18


>sp|FAU1_HALMA|PROBABLE ribonuclease FAU-1|Haloarcula marismortui (strain ATCC 43049

Query: 1 RVRAMYETA 9
RVR +Y TA
Sbjct: 4 RVRGIYATA 12


>sp|FAU1_HALSA|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 700922

Query: 1 RVRAMYETA 9
RVR +Y TA
Sbjct: 5 RVRGIYATA 13


>sp|FAU1_HALS3|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 29341

Query: 1 RVRAMYETA 9
RVR +Y TA
Sbjct: 5 RVRGIYATA 13


>sp|FAU1_PYRHO|PROBABLE ribonuclease FAU-1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RVRAMYETA 9
R+R +Y TA
Sbjct: 10 RIRGIYSTA 18


>sp|FAU1_AERPE|PROBABLE ribonuclease FAU-1|Aeropyrum pernix (strain ATCC 700893

Query: 1 RVRAMYETA 9
RVR +Y TA
Sbjct: 6 RVRGIYATA 14


>sp|FAU1_NATPD|PROBABLE ribonuclease FAU-1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RVRAMYETA 9
RVR +Y TA
Sbjct: 4 RVRGIYTTA 12


>sp|RFRNP_METM6|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain C6 /

Query: 4 AMYETA 9
AMYETA
Sbjct: 119 AMYETA 124


>sp|NASA_HALMT|ASSIMILATORY nitrate reductase|Haloferax mediterranei (strain ATCC 33500

Query: 1 RVRAMYETAP 10
R+RA ET P
Sbjct: 462 RIRAATETPP 471


>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 1 RVRAMYETA 9
RVR +Y TA
Sbjct: 12 RVRGIYATA 20


>sp|RFRNP_METM5|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain C5 /

Query: 4 AMYETA 9
AMYETA
Sbjct: 119 AMYETA 124


>sp|RFRNP_METMP|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain DSM 14266

Query: 4 AMYETA 9
AMYETA
Sbjct: 119 AMYETA 124


>sp|FAU1_IGNH4|PROBABLE ribonuclease FAU-1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RVRAMYETA 9
RVR +Y TA
Sbjct: 7 RVRGIYATA 15


>sp|RFRNP_METM7|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain C7 /

Query: 4 AMYETA 9
AMYETA
Sbjct: 119 AMYETA 124


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 1 RVRAMYETA 9
R+R +Y TA
Sbjct: 10 RIRGIYSTA 18


>sp|FAU1_METKA|PROBABLE ribonuclease FAU-1|Methanopyrus kandleri (strain AV19 /

Query: 1 RVRAMYETA 9
R+R +Y TA
Sbjct: 6 RIRGIYSTA 14


>sp|Y2356_ARCFU|UPF0310 protein AF_2356|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RVRAMYETA 9
R+ A+YETA
Sbjct: 58 RIVAVYETA 66




81|SequenceR|410|401|SADACRVRAM

>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SADACRVRAM 10
+ADA R+R M
Sbjct: 500 NADALRIRKM 509


>sp|RS3A_METHJ|SMALL ribosomal subunit protein eS1|Methanospirillum hungatei JF-1

Query: 1 SADACRVRA 9
S D C+VRA
Sbjct: 112 SKDGCKVRA 120




82|SequenceR|415|406|WKWFHSADAC

>sp|HBCL2_METS5|4-HYDROXYBUTYRATE--COA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 3 WFHSADA 9
WFHS DA
Sbjct: 420 WFHSGDA 426


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 WKWFHSA 7
W W HSA
Sbjct: 604 WVWQHSA 610


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 WKWFHSA 7
W W HSA
Sbjct: 604 WIWQHSA 610


>sp|PTH_PYRAB|PEPTIDYL-TRNA hydrolase|Pyrococcus abyssi (strain GE5 /

Query: 2 KWFHSA 7
KWFH
Sbjct: 46 KWFHEG 51


>sp|RL2_METBU|LARGE ribosomal subunit protein uL2|Methanococcoides burtonii (strain DSM

Query: 2 KWFH 5
KWFH
Sbjct: 147 KWFH 150


>sp|RL2_ARCFU|LARGE ribosomal subunit protein uL2|Archaeoglobus fulgidus (strain ATCC

Query: 2 KWFH 5
KWFH
Sbjct: 146 KWFH 149


>sp|RL15_METKA|LARGE ribosomal subunit protein uL15|Methanopyrus kandleri (strain AV19

Query: 2 KWFH 5
KWFH
Sbjct: 45 KWFH 48


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KWFHSADA 9
KWF+S A
Sbjct: 591 KWFYSQQA 598




83|SequenceR|420|411|GSWESWKWFH

>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GSWESWKWFH 10
G+W W+ FH
Sbjct: 119 GNWADWEQFH 128


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GSWESWKWFH 10
G+W W+ FH
Sbjct: 119 GNWADWEQFH 128


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WESWKW 8
W SW W
Sbjct: 2505 WNSWDW 2510


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 ESWKW 8
ESWKW
Sbjct: 310 ESWKW 314


>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 5 SWKWFH 10
SW W H
Sbjct: 59 SWTWIH 64


>sp|PYRH_PYRHO|URIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WESWK 7
WE+WK
Sbjct: 97 WEAWK 101


>sp|PYRH_PYRFU|URIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WESWK 7
WE+WK
Sbjct: 97 WEAWK 101


>sp|PYRH_PYRAB|URIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 WESWK 7
WE+WK
Sbjct: 97 WEAWK 101


>sp|NPD_PYRAB|NAD-DEPENDENT protein deacylase|Pyrococcus abyssi (strain GE5 /

Query: 3 WESWKW 8
WE +KW
Sbjct: 61 WEFYKW 66


>sp|MPTE_PYRFU|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WESWKWFH 10
WE WK F+
Sbjct: 3 WEEWKPFY 10


>sp|TRMI_PYRAB|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 2 SWESWKW 8
+WE+ KW
Sbjct: 134 AWENIKW 140


>sp|RS10_METS3|SMALL ribosomal subunit protein uS10|Methanobrevibacter smithii (strain

Query: 1 GSWESWK 7
SWE W+
Sbjct: 59 ASWEKWE 65


>sp|K6PF_THELI|ADP-SPECIFIC phosphofructokinase|Thermococcus litoralis

Query: 2 SWESWKWFH 10
S+E+ KWF+
Sbjct: 81 SYEADKWFN 89


>sp|NPD_THEKO|NAD-DEPENDENT protein deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 WESWKW 8
WE +KW
Sbjct: 61 WEFYKW 66


>sp|ASRAC_PYRHO|ALANINE/SERINE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GSWESWKWFH 10
G W + +WF+
Sbjct: 289 GKWFASEWFN 298


>sp|AMZA_SULAC|ARCHAEMETZINCIN acidocaldarius (strain ATCC 33909

Query: 2 SWESWKW 8
+WE W++
Sbjct: 46 NWERWQY 52


>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 ESWKW 8
+SWKW
Sbjct: 308 DSWKW 312


>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 5 SWKWFH 10
+W W H
Sbjct: 59 NWTWIH 64


>sp|SYS_PYRAE|SERINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 ESWKW 8
+SWKW
Sbjct: 310 DSWKW 314


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 ESWKWF 9
E W WF
Sbjct: 256 ERWAWF 261


>sp|KTHY2_SACS2|PROBABLE thymidylate kinase 2|Saccharolobus solfataricus (strain ATCC

Query: 3 WESWKWFH 10
W S +W H
Sbjct: 38 WNSSEWIH 45


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WESWK 7
WE+W+
Sbjct: 461 WENWR 465


>sp|ENGB_METMA|PROBABLE GTP-binding protein EngB|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 WESWK 7
W++WK
Sbjct: 169 WQNWK 173


>sp|NPD_PYRFU|NAD-DEPENDENT protein deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WESWKW 8
WE +KW
Sbjct: 61 WEFYKW 66


>sp|ENGB_METBF|PROBABLE GTP-binding protein EngB|Methanosarcina barkeri (strain Fusaro /

Query: 3 WESWK 7
W++WK
Sbjct: 169 WQNWK 173


>sp|ABLA_METMP|L-LYSINE 2,3-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 2 SWESWKW 8
+W +KW
Sbjct: 24 NWNDYKW 30


>sp|Y683_METJA|UNCHARACTERIZED protein MJ0683|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSWESW 6
G W SW
Sbjct: 53 GKWGSW 58


>sp|SYS_PYRIL|SERINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 ESWKW 8
+SW+W
Sbjct: 309 DSWRW 313


>sp|DHE2_HALSI|NAD-SPECIFIC glutamate dehydrogenase A|Halobacterium salinarum (Halobacterium

Query: 1 GSWESWK 7
G W +WK
Sbjct: 108 GMWMTWK 114


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSW-ESWKW 8
G+W E WKW
Sbjct: 320 GAWGEYWKW 328


>sp|MOBA_PYRFU|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus furiosus (strain

Query: 4 ESWKW 8
E WKW
Sbjct: 171 ERWKW 175


>sp|SODM2_HALVD|SUPEROXIDE dismutase [Mn] 2|Haloferax volcanii (strain ATCC 29605

Query: 1 GSWESWK 7
GS+E+WK
Sbjct: 103 GSYEAWK 109


>sp|RL4_ARCFU|LARGE ribosomal subunit protein uL4|Archaeoglobus fulgidus (strain ATCC

Query: 2 SWESW 6
SWE+W
Sbjct: 57 SWENW 61


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SWESWKWF 9
SW W +F
Sbjct: 313 SWNFWDYF 320


>sp|SODM1_HALVD|SUPEROXIDE dismutase [Mn] 1|Haloferax volcanii (strain ATCC 29605

Query: 1 GSWESWK 7
GS+E+WK
Sbjct: 104 GSYEAWK 110


>sp|NPD1_ARCFU|NAD-DEPENDENT protein deacylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 WKWF 9
WKW+
Sbjct: 61 WKWY 64


>sp|RL13_PYRIL|LARGE ribosomal subunit protein uL13|Pyrobaculum islandicum (strain DSM

Query: 1 GSWESWK 7
+WE WK
Sbjct: 163 AAWEQWK 169


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 ESWKW 8
ESW+W
Sbjct: 315 ESWEW 319


>sp|RL13_PYRNV|LARGE ribosomal subunit protein uL13|Pyrobaculum neutrophilum (strain DSM

Query: 1 GSWESWK 7
+WE WK
Sbjct: 163 AAWEQWK 169


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SWESWKW 8
+W++W++
Sbjct: 221 TWQNWRY 227


>sp|SYS_THEON|SERINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 4 ESWKW 8
ESW+W
Sbjct: 315 ESWEW 319


>sp|RTCA_THEKO|RNA 3'-terminal phosphate cyclase|Thermococcus kodakarensis (strain

Query: 3 WESWKWF 9
WE +WF
Sbjct: 182 WERIEWF 188




84|SequenceR|425|416|TTFNQGSWES

>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 TTFNQGSW 8
T FN+GSW
Sbjct: 339 TIFNEGSW 346


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 TTFNQGSW 8
T FN+GSW
Sbjct: 339 TIFNEGSW 346


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 TTFNQGSW 8
T FNQG+W
Sbjct: 339 TIFNQGNW 346


>sp|GLMM_METM7|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C7 /

Query: 3 FNQGSWES 10
FN+G+W++
Sbjct: 124 FNEGTWDN 131


>sp|GLMM_METM5|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C5 /

Query: 3 FNQGSWES 10
FN+G+W++
Sbjct: 124 FNEGTWDN 131


>sp|RNZ_THEKO|RIBONUCLEASE Z|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TFNQGSWE 9
TF G+WE
Sbjct: 298 TFKSGTWE 305


>sp|Y2423_ARCFU|UNCHARACTERIZED protein AF_2423|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 QGSWES 10
QG+WES
Sbjct: 128 QGNWES 133


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 NQGSWES 10
NQG WE+
Sbjct: 305 NQGFWEA 311


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 4 NQGSWES 10
NQG WE+
Sbjct: 305 NQGFWEA 311


>sp|RNZ_THEON|RIBONUCLEASE Z|Thermococcus onnurineus (strain NA1)

Query: 2 TFNQGSWE 9
TF G WE
Sbjct: 295 TFKSGRWE 302


>sp|Y1438_METS3|MEMO1 family protein Msm_1438|Methanobrevibacter smithii (strain ATCC

Query: 1 TTFNQGSW 8
+ FN+G W
Sbjct: 96 SVFNKGEW 103


>sp|KAE1_THEPD|TRNA N6-adenosine threonylcarbamoyltransferase|Thermofilum pendens

Query: 1 TTFNQGSW 8
TTFN+G +
Sbjct: 145 TTFNEGRY 152


>sp|RS5_METVS|SMALL ribosomal subunit protein uS5|Methanococcus vannielii (strain

Query: 3 FNQGSWE 9
FN SWE
Sbjct: 11 FNTDSWE 17


>sp|RS5_METVA|SMALL ribosomal subunit protein uS5|Methanococcus vannielii

Query: 3 FNQGSWE 9
FN SWE
Sbjct: 11 FNTDSWE 17


>sp|GLMM_METS3|PROBABLE phosphoglucosamine mutase|Methanobrevibacter smithii (strain ATCC

Query: 2 TFNQGSW 8
TFN SW
Sbjct: 400 TFNDDSW 406


>sp|GVPD_HALMT|PROTEIN GvpD|Haloferax mediterranei (strain ATCC 33500

Query: 1 TTFNQGSWE 9
T N G+WE
Sbjct: 245 TGANNGTWE 253


>sp|FAU1_NATPD|PROBABLE ribonuclease FAU-1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 TTFNQGSW 8
TTF +G W
Sbjct: 370 TTFVEGRW 377


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 QGSWE 9
QGSWE
Sbjct: 870 QGSWE 874


>sp|NRDR_HALMD|TRANSCRIPTIONAL repressor NrdR|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 TTFNQGSWES 10
TT+ + WES
Sbjct: 39 TTYERPEWES 48


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TTFNQGSW 8
T F Q SW
Sbjct: 339 TIFEQNSW 346


>sp|Y1656_ARCFU|UNCHARACTERIZED protein AF_1656|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TTFNQGSWES 10
+TF G W S
Sbjct: 32 STFKSGHWAS 41




85|SequenceR|430|421|PAAELTTFNQ

>sp|PRIS_SULTO|DNA primase small subunit PriS|Sulfurisphaera tokodaii (strain DSM

Query: 2 AAELTTFN 9
+AELT FN
Sbjct: 277 SAELTLFN 284


>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 ELTTFNQ 10
E+TTFN+
Sbjct: 146 EITTFNE 152


>sp|AHBD_METBF|ADOMET-DEPENDENT heme synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PAAELTT 7
PA ELTT
Sbjct: 35 PAGELTT 41




86|SequenceR|435|426|DPAESPAAEL

>sp|DNAG_NATPD|DNA primase DnaG|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PAESPAAE 9
PAESPAA+
Sbjct: 320 PAESPAAD 327


>sp|PYRH_THEPD|URIDYLATE kinase|Thermofilum pendens (strain DSM 2475

Query: 1 DPAESPAAEL 10
DP +PAA L
Sbjct: 156 DPKRNPAATL 165


>sp|FLAB2_THEKO|FLAGELLIN B2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DPAESPAA 8
DPA+ PA+
Sbjct: 68 DPADPPAS 75


>sp|SYH_KORCO|HISTIDINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DPAESPAAE 9
DP E+P+ E
Sbjct: 36 DPIETPSLE 44


>sp|FWDB_METJA|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanocaldococcus

Query: 1 DPAESPAAEL 10
DP E+P +L
Sbjct: 370 DPHETPTTQL 379


>sp|SYDND_METJA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DPAESPAAEL 10
DPAE AEL
Sbjct: 114 DPAEKVPAEL 123


>sp|GATA_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Natronomonas pharaonis (strain ATCC

Query: 2 PAESPAAE 9
P E+PAAE
Sbjct: 89 PTENPAAE 96




87|SequenceR|440|431|VIRWVDPAES

>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 VIRWVDPAES 10
++ WV+P ES
Sbjct: 679 MVDWVNPGES 688


>sp|HELS_CALMQ|ATP-DEPENDENT DNA helicase Hel308|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 IRWVDPAES 10
+R++DP E+
Sbjct: 274 VRYIDPGEA 282


>sp|ARGB_METB6|ACETYLGLUTAMATE kinase|Methanoregula boonei (strain DSM 21154

Query: 2 IRWVDPA 8
I W+DP+
Sbjct: 154 IEWIDPS 160


>sp|FTRL_METKA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanopyrus kandleri (strain AV19

Query: 1 VIRWVDPAES 10
V RW+DP E+
Sbjct: 56 VERWLDPEET 65


>sp|FEN_METS3|FLAP endonuclease 1|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 IRWVDPAES 10
IRW PA++
Sbjct: 281 IRWKKPAKN 289


>sp|FAU1_NATPD|PROBABLE ribonuclease FAU-1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VIRWVDPA 8
RW DPA
Sbjct: 79 TFRWTDPA 86


>sp|PCNA_METBU|DNA polymerase sliding clamp|Methanococcoides burtonii (strain DSM

Query: 1 VIRWVDPA 8
V+R VDPA
Sbjct: 35 VVRAVDPA 42


>sp|Y1865_METTH|UPF0288 protein MTH_1865|Methanothermobacter thermautotrophicus (strain

Query: 2 IRWVDPAE 9
IRW P+E
Sbjct: 97 IRWTTPSE 104


>sp|FLPA_METMJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanoculleus marisnigri (strain

Query: 2 IRWVDP 7
+RW+DP
Sbjct: 181 VRWLDP 186


>sp|Y1633_ARCFU|UNCHARACTERIZED protein AF_1633|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VIRWVDPAE 9
V +W +PAE
Sbjct: 138 VQKWSEPAE 146


>sp|MTD_METS3|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanobrevibacter

Query: 4 WVDPAE 9
W+DP E
Sbjct: 126 WLDPTE 131


>sp|LIPB_PYRCJ|PROBABLE octanoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 WVDPA 8
WVDPA
Sbjct: 200 WVDPA 204




88|SequenceR|445|436|GPELSVIRWV

>sp|GGR1_METTH|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GPELSVIRW 9
GPE V RW
Sbjct: 161 GPESRVARW 169


>sp|GGR3_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 3|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GPELSVIRW 9
GPE V RW
Sbjct: 160 GPEGHVARW 168


>sp|GGR_METS3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GPELSVIRW 9
GPE V RW
Sbjct: 157 GPEGHVARW 165


>sp|GGR2_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GPELSVIRW 9
GPE + RW
Sbjct: 157 GPESRIGRW 165


>sp|AGLB1_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PELSVIRW 9
PE SV+ W
Sbjct: 458 PEYSVMSW 465


>sp|Y1354_METJA|UNCHARACTERIZED protein MJ1354|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PELSVIRWV 10
P LS++ WV
Sbjct: 103 PNLSLLVWV 111




89|SequenceR|450|441|TVTHNGPELS

>sp|ACYP_METBU|ACYLPHOSPHATASE burtonii (strain DSM 6242

Query: 4 HNGPELS 10
H GPELS
Sbjct: 67 HIGPELS 73


>sp|PURA_METVS|ADENYLOSUCCINATE synthetase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TVTHNGPELS 10
T+ GPELS
Sbjct: 321 TIISTGPELS 330


>sp|GLMS_PYRHO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus horikoshii (strain ATCC

Query: 3 THNGPEL 9
TH GPE+
Sbjct: 386 THAGPEI 392


>sp|MANB_METJA|PHOSPHOMANNOMUTASE jannaschii (strain ATCC 43067

Query: 1 TVTHNGPELS 10
T +HN PE +
Sbjct: 95 TASHNPPEYT 104


>sp|GLMS_THEKO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Thermococcus kodakarensis (strain

Query: 3 THNGPEL 9
TH GPE+
Sbjct: 386 THAGPEI 392


>sp|PUS10_CENSY|TRNA pseudouridine synthase Pus10|Cenarchaeum symbiosum (strain A)

Query: 1 TVTHNGPELS 10
+V H PELS
Sbjct: 121 SVDHGAPELS 130


>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM

Query: 1 TVTHNGPE 8
T +HN PE
Sbjct: 89 TASHNPPE 96


>sp|GLMS_PYRFU|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus furiosus (strain ATCC

Query: 3 THNGPEL 9
TH GPE+
Sbjct: 386 THAGPEI 392


>sp|BACS_HALSD|SENSORY rhodopsin|Halorubrum sodomense

Query: 1 TVTHNGPEL 9
TVT NG EL
Sbjct: 62 TVTVNGAEL 70


>sp|BACS1_HALSS|SENSORY rhodopsin-1|Halobacterium sp. (strain SG1)

Query: 1 TVTHNGPEL 9
TVT NG EL
Sbjct: 62 TVTVNGAEL 70


>sp|DTDA_ARCFU|D-AMINOACYL-TRNA deacylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VTHNGP 7
VTH+GP
Sbjct: 136 VTHHGP 141


>sp|PGMMM_THEKO|PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE kodakarensis (strain ATCC BAA-918

Query: 1 TVTHNGPE 8
T +HN PE
Sbjct: 99 TASHNPPE 106


>sp|GLMM_METM7|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C7 /

Query: 1 TVTHNGPE 8
T +HN PE
Sbjct: 86 TASHNPPE 93


>sp|Y104_SACS2|UNCHARACTERIZED aminotransferase SSO0104|Saccharolobus solfataricus (strain ATCC

Query: 1 TVTHNGPEL 9
TVT GP+L
Sbjct: 145 TVTEMGPDL 153


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 2 VTHNGP 7
VTH+GP
Sbjct: 142 VTHHGP 147


>sp|DTDA_KORCO|D-AMINOACYL-TRNA deacylase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 THNGPEL 9
TH+GP L
Sbjct: 127 THHGPTL 133


>sp|GLMS_PYRAB|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus abyssi (strain GE5 /

Query: 3 THNGPEL 9
TH GPE+
Sbjct: 386 THAGPEI 392


>sp|GLMM_METM5|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C5 /

Query: 1 TVTHNGPE 8
T +HN PE
Sbjct: 86 TASHNPPE 93


>sp|GLMM_THEKO|PROBABLE phosphoglucosamine mutase|Thermococcus kodakarensis (strain ATCC

Query: 1 TVTHNGPE 8
T +HN PE
Sbjct: 94 TASHNPPE 101


>sp|GLMM_THEGJ|PROBABLE phosphoglucosamine mutase|Thermococcus gammatolerans (strain DSM

Query: 1 TVTHNGPE 8
T +HN PE
Sbjct: 94 TASHNPPE 101


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 1 TVTHNGPE 8
T +HN PE
Sbjct: 94 TASHNPPE 101


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TVTHNGPE 8
T +HN PE
Sbjct: 87 TASHNPPE 94


>sp|GLMM_METMP|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TVTHNGPE 8
T +HN PE
Sbjct: 86 TASHNPPE 93


>sp|GLMM_METVS|PHOSPHOGLUCOSAMINE mutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TVTHNGPE 8
T +HN PE
Sbjct: 86 TASHNPPE 93


>sp|DTDA_METBF|D-AMINOACYL-TRNA deacylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VTHNGP-ELS 10
VTH+GP ELS
Sbjct: 168 VTHHGPTELS 177


>sp|DTDA_METMA|D-AMINOACYL-TRNA deacylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VTHNGP-ELS 10
VTH+GP ELS
Sbjct: 157 VTHHGPTELS 166


>sp|K1PF_HALVD|1-PHOSPHOFRUCTOKINASE volcanii (strain ATCC 29605

Query: 2 VTHNGPEL 9
+ HNGP++
Sbjct: 103 LNHNGPQI 110


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 TVTHNGPE 8
T +HN PE
Sbjct: 94 TASHNPPE 101


>sp|DTDA_METAC|D-AMINOACYL-TRNA deacylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VTHNGP 7
VTH+GP
Sbjct: 157 VTHHGP 162


>sp|DTDA_METMJ|D-AMINOACYL-TRNA deacylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VTHNGP 7
VTH+GP
Sbjct: 127 VTHHGP 132




90|SequenceR|455|446|PKWFLTVTHN

>sp|GYRA_HALL2|DNA gyrase subunit A|Haloferax lucentense (strain DSM 14919

Query: 3 WFLTVTHN 10
W LTVT N
Sbjct: 730 WILTVTEN 737


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PKWFLTVTH 9
P+WF+ + H
Sbjct: 351 PQWFVKINH 359


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PKWFLTVTH 9
P+WF+ + H
Sbjct: 351 PQWFVKINH 359


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 KWFLTVT 8
+WF+TVT
Sbjct: 414 QWFITVT 420


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 3 WFLTVTH 9
WFL++ H
Sbjct: 403 WFLSIAH 409


>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 KWFLTVT 8
+WF+TVT
Sbjct: 410 QWFITVT 416


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 KWFLTVT 8
+WF+TVT
Sbjct: 413 QWFITVT 419


>sp|Y1792_ARCFU|UNCHARACTERIZED protein AF_1792|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KWFLTV 7
KWF+TV
Sbjct: 43 KWFITV 48


>sp|Y1016_ARCFU|UNCHARACTERIZED protein AF_1016|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WFLTVTH 9
WFL V H
Sbjct: 86 WFLNVIH 92


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 WFLTVT 8
WFLTV+
Sbjct: 191 WFLTVS 196


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 3 WFLTVT 8
WFLTV+
Sbjct: 191 WFLTVS 196


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 3 WFLTVT 8
WFLTV+
Sbjct: 191 WFLTVS 196


>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 3 WFLTVT 8
WFLTV+
Sbjct: 191 WFLTVS 196


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 KWFLTVT 8
+WF+T+T
Sbjct: 415 QWFITIT 421


>sp|PELO_METMJ|PROTEIN pelota homolog|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PKWFLTVT 8
P+W TVT
Sbjct: 153 PEWVTTVT 160


>sp|Y202_METJA|UNCHARACTERIZED protein MJ0202|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKWFLTVTH 9
P W TV H
Sbjct: 62 PAWMGTVVH 70


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 PKWFLTVTH 9
PK+F+TV +
Sbjct: 36 PKYFITVPY 44


>sp|Y1052_THEAC|UNCHARACTERIZED solute-binding protein Ta1052|Thermoplasma acidophilum (strain ATCC

Query: 1 PKWFLTVTHN 10
P WF +T N
Sbjct: 141 PYWFENITEN 150


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 4 FLTVTHN 10
LTVTHN
Sbjct: 1048 LLTVTHN 1054


>sp|Y4342_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 5 LTVTHN 10
+TVTHN
Sbjct: 192 ITVTHN 197


>sp|Y1038_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 5 LTVTHN 10
+TVTHN
Sbjct: 192 ITVTHN 197


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PKWFLTV 7
PK+F+TV
Sbjct: 32 PKFFITV 38


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC

Query: 2 KWFLTVTH 9
+WF TV H
Sbjct: 61 RWFTTVDH 68


>sp|PURO_THEKO|IMP cyclohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KWFLTVTHN 10
K FLT T+N
Sbjct: 140 KAFLTATYN 148




91|SequenceR|460|451|HLKSLPKWFL

>sp|GLCDH_HALMT|GLUCOSE 1-dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 5 LPKWFL 10
LPKWFL
Sbjct: 319 LPKWFL 324


>sp|KADA_META3|ADENYLATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 HLKSLPKWFL 10
+L LPKW L
Sbjct: 101 YLAGLPKWVL 110


>sp|RS13_ARCFU|SMALL ribosomal subunit protein uS13|Archaeoglobus fulgidus (strain

Query: 2 LKSLPKWFL 10
++SLP W L
Sbjct: 69 IESLPSWLL 77


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 1 HLKSLPKW 8
HL +LP W
Sbjct: 198 HLAALPGW 205


>sp|RS13_METBU|SMALL ribosomal subunit protein uS13|Methanococcoides burtonii (strain

Query: 3 KSLPKWFL 10
+ LPKW L
Sbjct: 73 EQLPKWML 80


>sp|GLCDH_HALMA|GLUCOSE 1-dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LKSLPKWFL 10
L+ LP W L
Sbjct: 313 LQELPAWLL 321


>sp|TRUD_NANEQ|PROBABLE tRNA pseudouridine synthase D|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 LKSLPKWFL 10
K++PKW L
Sbjct: 236 FKAIPKWIL 244


>sp|Y718_METJA|UNCHARACTERIZED transporter MJ0718|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HLKSLPK 7
H+KSLPK
Sbjct: 119 HVKSLPK 125


>sp|KADA_THEVO|ADENYLATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HLKSLPKWFL 10
+L LP+W L
Sbjct: 90 YLPGLPEWVL 99


>sp|KADA_THEAC|ADENYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HLKSLPKWFL 10
+L LP+W L
Sbjct: 90 YLPGLPEWVL 99


>sp|RS27A_IGNH4|SMALL ribosomal subunit protein eS31|Ignicoccus hospitalis (strain

Query: 1 HLKSLPKW 8
HLK +P+W
Sbjct: 39 HLKPVPRW 46


>sp|EF2_METMT|ELONGATION factor 2|Methanococcoides methylutens

Query: 1 HLKSLPK 7
H+K LPK
Sbjct: 400 HMKDLPK 406


>sp|EF2_METBU|ELONGATION factor 2|Methanococcoides burtonii (strain DSM 6242

Query: 1 HLKSLPK 7
H+K LPK
Sbjct: 400 HMKDLPK 406


>sp|KADA_METVO|ADENYLATE kinase|Methanococcus voltae

Query: 1 HLKSLPKWFL 10
+L LP W L
Sbjct: 101 YLPGLPSWVL 110


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LKSLPKWFL 10
++ LPKW L
Sbjct: 146 VEGLPKWAL 154


>sp|RS27A_SULAC|SMALL ribosomal subunit protein eS31|Sulfolobus acidocaldarius (strain

Query: 1 HLKSLPKW 8
H+K L +W
Sbjct: 45 HMKPLERW 52


>sp|RL3_CALMQ|LARGE ribosomal subunit protein uL3|Caldivirga maquilingensis (strain

Query: 2 LKSLPKW 8
+K LP+W
Sbjct: 225 VKELPRW 231


>sp|UREND_METTH|DNA uridine endonuclease|Methanothermobacter thermautotrophicus

Query: 1 HLKSLPKWFL 10
H K KWF+
Sbjct: 18 HRKGFLKWFM 27


>sp|RPO3_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KSLPKW 8
KS+P+W
Sbjct: 165 KSIPEW 170


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC 700893

Query: 2 LKSLPKW 8
+K LP+W
Sbjct: 223 VKELPRW 229




92|SequenceR|465|456|IKGNAHLKSL

>sp|RS4E_KORCO|SMALL ribosomal subunit protein eS4|Korarchaeum cryptofilum (strain

Query: 3 GNAHLKSL 10
G+ HLKSL
Sbjct: 6 GSRHLKSL 13


>sp|RL44E_HALSA|LARGE ribosomal subunit protein eL42|Halobacterium salinarum (strain

Query: 3 GNAHLK 8
GNAHL+
Sbjct: 76 GNAHLR 81


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKGNAHLKSL 10
IKG+ HL L
Sbjct: 224 IKGDIHLHDL 233




93|SequenceR|470|461|VNYFLIKGNA

>sp|RL3_METBU|LARGE ribosomal subunit protein uL3|Methanococcoides burtonii (strain DSM

Query: 1 VNYFLIKGN 9
VNY L++GN
Sbjct: 285 VNYGLVRGN 293


Query: 2 NYFLIKGN 9
NY LIKG+
Sbjct: 293 NYILIKGS 300


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NYFLIKGN 9
NYFL +GN
Sbjct: 479 NYFLKEGN 486


>sp|RL3_METLZ|LARGE ribosomal subunit protein uL3|Methanocorpusculum labreanum (strain

Query: 2 NYFLIKGN 9
NY LIKG+
Sbjct: 289 NYVLIKGS 296


>sp|HPPA2_METMA|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Methanosarcina mazei (strain

Query: 1 VNYFLIKGNA 10
V+YF++ G+A
Sbjct: 378 VSYFIVGGSA 387


>sp|RL3_METST|LARGE ribosomal subunit protein uL3|Methanosphaera stadtmanae (strain

Query: 2 NYFLIKGN 9
NY L+KG+
Sbjct: 292 NYILVKGS 299


>sp|Y1639_METJA|UNCHARACTERIZED protein MJ1639|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YFLIKGNA 10
YF+IKG++
Sbjct: 2 YFVIKGDS 9


>sp|MRE11_PYRHO|DNA double-strand break repair protein|Pyrococcus horikoshii (strain

Query: 2 NYFLIKG 8
NY+L+KG
Sbjct: 126 NYWLVKG 132


>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VNYFLIK 7
VNY+LIK
Sbjct: 129 VNYYLIK 135


>sp|RL3_META3|LARGE ribosomal subunit protein uL3|Methanococcus aeolicus (strain ATCC

Query: 2 NYFLIKGN 9
NY L+KG+
Sbjct: 288 NYVLVKGS 295


>sp|BACR_HALSA|BACTERIORHODOPSIN salinarum (strain ATCC 700922

Query: 3 YFLIKG 8
YFL+KG
Sbjct: 39 YFLVKG 44


>sp|Y260_METJA|UNCHARACTERIZED protein MJ0260|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NYFLIKGN 9
YF+IKG+
Sbjct: 132 TYFIIKGD 139


>sp|Y835_METJA|UNCHARACTERIZED protein MJ0835|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VNYFLI 6
VNYFLI
Sbjct: 345 VNYFLI 350


>sp|RL18A_SACI7|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 VNYFLIKGNA 10
+ ++L+KG+A
Sbjct: 4 IKFYLVKGSA 13


>sp|RL18A_SACI6|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 VNYFLIKGNA 10
+ ++L+KG+A
Sbjct: 4 IKFYLVKGSA 13


>sp|RL18A_SACI4|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 VNYFLIKGNA 10
+ ++L+KG+A
Sbjct: 4 IKFYLVKGSA 13


>sp|RL18A_SACI3|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 VNYFLIKGNA 10
+ ++L+KG+A
Sbjct: 4 IKFYLVKGSA 13


>sp|RL18A_SACI2|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 VNYFLIKGNA 10
+ ++L+KG+A
Sbjct: 4 IKFYLVKGSA 13


>sp|RL18A_SACI1|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 VNYFLIKGNA 10
+ ++L+KG+A
Sbjct: 4 IKFYLVKGSA 13


>sp|Y1291_METJA|UNCHARACTERIZED protein MJ1291|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FLIKGNA 10
FL+KGN+
Sbjct: 193 FLLKGNS 199




94|SequenceR|475|466|LNEVVVNYFL

>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 EVVVNYF 9
EVV+NYF
Sbjct: 88 EVVINYF 94


>sp|IF2A_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 1 LNEVVVNY 8
LNE+V NY
Sbjct: 163 LNEIVQNY 170


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 3 EVVVNYF 9
+V++NYF
Sbjct: 197 DVIINYF 203


>sp|NEP1_THESM|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus sibiricus (strain

Query: 1 LNEVVVNY 8
+NEV++NY
Sbjct: 207 VNEVLINY 214


>sp|SYW_METJA|TRYPTOPHAN--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LNEVVVNY 8
LNE + NY
Sbjct: 125 LNEYITNY 132


>sp|Y482_METJA|UNCHARACTERIZED protein MJ0482|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VVVNYFL 10
V+VNYFL
Sbjct: 34 VLVNYFL 40


>sp|NEP1_PYRAB|RIBOSOMAL RNA small subunit methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 LNEVVVNY 8
+NEV+V+Y
Sbjct: 212 VNEVIVSY 219




95|SequenceR|480|471|SSPKDLNEVV

>sp|DHQS_METMP|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PKDLNEV 9
PKD+NEV
Sbjct: 161 PKDINEV 167


>sp|DHQS_METM7|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 3 PKDLNEV 9
PKD+NEV
Sbjct: 161 PKDINEV 167


>sp|DHQS_METVS|3-DEHYDROQUINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 PKDLNEV 9
PKD+NEV
Sbjct: 161 PKDINEV 167


>sp|RADA_THEVO|DNA repair and recombination protein|Thermoplasma volcanium (strain

Query: 1 SSPKDLNEV 9
+SPKDL++V
Sbjct: 42 ASPKDLSDV 50


>sp|RADA_THEAC|DNA repair and recombination protein|Thermoplasma acidophilum (strain

Query: 1 SSPKDLNEV 9
+SPKDL++V
Sbjct: 42 ASPKDLSDV 50


>sp|PURO_METJA|IMP cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PKDLNEV 9
PKDLNE+
Sbjct: 45 PKDLNEM 51


>sp|RADA_PICTO|DNA repair and recombination protein|Picrophilus torridus (strain

Query: 1 SSPKDLNEV 9
+SPKDL E+
Sbjct: 41 ASPKDLAEI 49


>sp|RS3_IGNH4|SMALL ribosomal subunit protein uS3|Ignicoccus hospitalis (strain KIN4/I

Query: 2 SPKDLNEVV 10
SP+++NE+V
Sbjct: 204 SPEEVNEIV 212


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PKDLNEVV 10
PK+L EVV
Sbjct: 420 PKELEEVV 427


>sp|ARGD_METKA|ACETYLORNITHINE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 PKDLNEV 9
PKDLN+V
Sbjct: 92 PKDLNKV 98


>sp|Y1270_PYRAB|UPF0148 protein PYRAB12700|Pyrococcus abyssi (strain GE5 /

Query: 1 SSPKDLNEVV 10
S PKD+NE++
Sbjct: 73 SLPKDVNELM 82


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SPKDLNEVV 10
+PKDLN+++
Sbjct: 406 NPKDLNKMI 414


>sp|WTPB_METJA|MOLYBDATE/TUNGSTATE transport system permease protein|Methanocaldococcus jannaschii

Query: 1 SSPKDLNEVV 10
S+P DLN+++
Sbjct: 28 SNPGDLNQLL 37


>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 3 PKDLNEVV 10
PKD+ EV+
Sbjct: 307 PKDIKEVI 314


>sp|RL14E_SULTO|LARGE ribosomal subunit protein eL14|Sulfurisphaera tokodaii (strain

Query: 1 SSPKDLNEV 9
+ PKD+N+V
Sbjct: 36 TGPKDVNKV 44


>sp|RLMN_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 3 PKDLNEV 9
PKD+N++
Sbjct: 38 PKDINDI 44


>sp|DHQS_META3|3-DEHYDROQUINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PKDLNEV 9
PKD+N+V
Sbjct: 161 PKDINDV 167


>sp|LYSY_HALMA|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 SSPKDLNEV 9
SSP+DL V
Sbjct: 58 SSPEDLESV 66


>sp|KDGK_SACS2|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE solfataricus (strain ATCC 35092

Query: 2 SPKDLNE 8
SP+D+NE
Sbjct: 117 SPEDINE 123


>sp|DHQS_METM5|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 3 PKDLNEV 9
P+D+NEV
Sbjct: 161 PEDINEV 167


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PKDLNEV 9
PK LNEV
Sbjct: 11 PKTLNEV 17


>sp|PUS10_THEAM|TRNA pseudouridine synthase Pus10|Thermosphaera aggregans (strain DSM

Query: 1 SSPKDLNEVV 10
S+P D N++V
Sbjct: 7 STPLDFNKIV 16


>sp|PCNA2_SULAC|DNA polymerase sliding clamp 2|Sulfolobus acidocaldarius (strain ATCC

Query: 2 SPKDLNEVV 10
S KD+NEV+
Sbjct: 70 SLKDVNEVI 78


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 SSPKDLNEVV 10
S+ K+LNEV+
Sbjct: 38 SNVKELNEVI 47


>sp|THII_METJA|PROBABLE tRNA sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PKDLNEVV 10
P D+NE+V
Sbjct: 90 PLDINEIV 97




96|SequenceR|485|476|SHLESSSPKD

>sp|ASPD_NITMS|L-ASPARTATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 SHLESSSPKD 10
SHL SS P D
Sbjct: 57 SHLLSSQPID 66




97|SequenceR|490|481|APAPISHLES

>sp|Y2347_METMJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanoculleus

Query: 2 PAPISHLES 10
P P HLES
Sbjct: 194 PEPEKHLES 202


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 2 PAPISHLE 9
P+P+ HLE
Sbjct: 332 PSPMFHLE 339


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 2 PAPISHLE 9
P+P+ HLE
Sbjct: 330 PSPLFHLE 337


>sp|HTR2_HALMA|SENSORY rhodopsin II transducer|Haloarcula marismortui (strain ATCC 43049

Query: 1 APAPISHLES 10
+ APIS +ES
Sbjct: 229 STAPISQMES 238


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PAPISHLES 10
P PI H ES
Sbjct: 426 PIPIVHCES 434




98|SequenceR|495|486|LKTSNAPAPI

>sp|Y1031_SACS2|UNCHARACTERIZED solute-binding protein SSO1031|Saccharolobus solfataricus (strain

Query: 2 KTSNAPAPI 10
+TSN P PI
Sbjct: 376 ETSNIPQPI 384


>sp|Y854_PYRHO|RUTC family protein PH0854|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 TSNAPAPI 10
T NAP PI
Sbjct: 7 TENAPKPI 14


>sp|RL10_META3|LARGE ribosomal subunit protein uL10|Methanococcus aeolicus (strain ATCC

Query: 1 LKTSNAPAPI 10
L+ APAPI
Sbjct: 107 LEDGKAPAPI 116




99|SequenceR|500|491|CRDLILKTSN

>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 2 RDLILKTSN 10
RD+ILK N
Sbjct: 114 RDIILKKKN 122




100|SequenceR|505|496|CIQYSCRDLI

>sp|CAS1C_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 IQYSCRDL 9
++Y+CRDL
Sbjct: 249 VRYACRDL 256


>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 2 IQYSCRD 8
+QY CRD
Sbjct: 515 VQYECRD 521


>sp|GLYA_META3|SERINE hydroxymethyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 CIQYSCRDL 9
CI++S R+L
Sbjct: 324 CIEFSAREL 332


>sp|FSX1_HALSH|FUSEXIN 1|Haloplanus natans (strain DSM 17983

Query: 2 IQYSCRD 8
IQY CR+
Sbjct: 512 IQYDCRE 518


>sp|Y711_METJA|UNCHARACTERIZED protein MJ0711|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IQYSCRDLI 10
I+YS +DLI
Sbjct: 155 IKYSTKDLI 163


>sp|Y3521_METJA|UNCHARACTERIZED protein MJECL21|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IQYSCRDLI 10
IQ +C+DLI
Sbjct: 367 IQEACKDLI 375


>sp|Y343_META3|UPF0280 protein Maeo_0343|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IQYSCRDLI 10
++Y C+++I
Sbjct: 95 VEYGCKNII 103


>sp|PURO_METST|IMP cyclohydrolase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 IQYSCRDLI 10
I Y+C D+I
Sbjct: 57 ISYNCIDII 65




101|SequenceR|510|501|NNAIVCIQYS

***** No hits found ******


102|SequenceR|515|506|SAGVSNNAIV

>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 AGVSNNAIV 10
AGV NA+V
Sbjct: 284 AGVDKNAVV 292




103|SequenceR|520|511|IVSAPSAGVS

>sp|GLCD1_PICTO|GLUCOSE 1-dehydrogenase 1|Picrophilus torridus (strain ATCC 700027

Query: 1 IVSAPSAGVS 10
IV P AGVS
Sbjct: 5 IVHPPGAGVS 14




104|SequenceR|525|516|DASIVIVSAP

>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DASIVIVSAP 10
DA+I++V+AP
Sbjct: 110 DAAILVVAAP 119


>sp|EF1A_METB6|ELONGATION factor 1-alpha|Methanoregula boonei (strain DSM 21154

Query: 1 DASIVIVSAP 10
DA+I++V+AP
Sbjct: 110 DAAILVVAAP 119


>sp|EF1A_METAC|ELONGATION factor 1-alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DASIVIVSAP 10
DA+I++V+AP
Sbjct: 110 DAAILVVAAP 119


>sp|AGL9_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl9|Haloferax volcanii

Query: 1 DASIVIVSAP 10
DA++VIV P
Sbjct: 248 DATLVIVGRP 257


>sp|EF1A_SACS2|ELONGATION factor 1-alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DASIVIVSA 9
DA+I++VSA
Sbjct: 109 DAAILVVSA 117


>sp|EF1A_SULTO|ELONGATION factor 1-alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DASIVIVSA 9
DA+I++VSA
Sbjct: 109 DAAILVVSA 117


>sp|EF1A_IGNH4|ELONGATION factor 1-alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DASIVIVSA 9
DA+I++VSA
Sbjct: 111 DAAILVVSA 119


>sp|EF1A_DESMO|ELONGATION factor 1-alpha|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 1 DASIVIVSA 9
DA+I++VSA
Sbjct: 111 DAAILVVSA 119




105|SequenceR|530|521|EKNEPDASIV

>sp|GGR2_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanococcoides burtonii (strain DSM 6242

Query: 1 EKNEPDASIV 10
EKN PDA I+
Sbjct: 244 EKNMPDAKII 253


>sp|DAPAT_METS3|LL-DIAMINOPIMELATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EKNEPDASIV 10
+KN PDA I+
Sbjct: 29 QKNNPDADII 38


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 EKNEPDASI 9
EKN P ASI
Sbjct: 895 EKNAPPASI 903


>sp|APGM_METS3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanobrevibacter smithii (strain ATCC

Query: 1 EKNEPDASIV 10
E NEP A+I+
Sbjct: 215 ENNEPPANII 224


>sp|Y1022_METTH|PUTATIVE biopolymer transport protein ExbB|Methanothermobacter

Query: 3 NEPDASIV 10
+EPDA++V
Sbjct: 239 DEPDANVV 246




106|SequenceR|535|526|REEEVEKNEP

>sp|GSA_PYRIL|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 EEVEKNEP 10
EE+EK EP
Sbjct: 306 EELEKGEP 313


>sp|PELO_PYRAE|PROTEIN pelota homolog|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 REEEVEKNE 9
RE E+EKNE
Sbjct: 103 REIEIEKNE 111


>sp|SYT_METST|THREONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 REEEVEKNEP 10
RE+E+ NEP
Sbjct: 206 REKELASNEP 215


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 EEVEKNEP 10
EE+E+ EP
Sbjct: 306 EELERGEP 313




107|SequenceR|540|531|ETGAIREEEV

>sp|TBP_PYROC|TATA-BOX-BINDING protein|Pyrodictium occultum

Query: 2 TGAIREEEV 10
TGA REEEV
Sbjct: 171 TGAKREEEV 179


>sp|TBP_SULTO|TATA-BOX-BINDING protein|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 TGAIREEEV 10
TGA REEEV
Sbjct: 163 TGAKREEEV 171


>sp|TBP_SACSH|TATA-BOX-BINDING protein|Saccharolobus shibatae (strain ATCC 51178

Query: 2 TGAIREEEV 10
TGA RE+EV
Sbjct: 162 TGAKREDEV 170


>sp|TBP_SACS2|TATA-BOX-BINDING protein|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TGAIREEEV 10
TGA RE+EV
Sbjct: 162 TGAKREDEV 170


>sp|VHUB_METJA|POLYFERREDOXIN protein VhuB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TGAIREEEV 10
TGA+ EEE+
Sbjct: 48 TGALVEEEI 56


>sp|NADK_HALSA|NAD kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ETGAIREEEV 10
ETGA+R EV
Sbjct: 114 ETGAVRCREV 123


>sp|NADK_HALS3|NAD kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ETGAIREEEV 10
ETGA+R EV
Sbjct: 114 ETGAVRCREV 123


>sp|TBP_SULAC|TATA-BOX-BINDING protein|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TGAIREEEV 10
TGA RE+EV
Sbjct: 162 TGAKREDEV 170


>sp|RL18A_METTH|LARGE ribosomal subunit protein eL20|Methanothermobacter

Query: 1 ETGAIREEEV 10
E AIREEE+
Sbjct: 26 ELNAIREEEI 35


>sp|SYR_METVS|ARGININE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ETGAIREEEV 10
ETG + EE+V
Sbjct: 277 ETGKVTEEDV 286




108|SequenceR|545|536|LSFGGETGAI

>sp|CARA_METJA|CARBAMOYL phosphate synthase small chain|Methanocaldococcus jannaschii

Query: 1 LSFGGET 7
L+FGGET
Sbjct: 254 LAFGGET 260


>sp|GUAAA_METBU|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcoides

Query: 2 SFGGETGA 9
+FGG TGA
Sbjct: 88 TFGGHTGA 95


>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SFGGETGAI 10
S GGE GA+
Sbjct: 359 SMGGEGGAV 367


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 FGGETGAI 10
FG E GAI
Sbjct: 841 FGSEVGAI 848


>sp|GUAAA_METJA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanocaldococcus

Query: 1 LSFGGETG 8
L++GGE G
Sbjct: 84 LAYGGEVG 91


>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 3 FGGETGA 9
FGG+TG+
Sbjct: 289 FGGDTGS 295


>sp|UVRC_HALSA|UVRABC system protein C|Halobacterium salinarum (strain ATCC 700922

Query: 3 FGGETGAI 10
F GETGA+
Sbjct: 202 FEGETGAL 209


>sp|UVRC_HALS3|UVRABC system protein C|Halobacterium salinarum (strain ATCC 29341

Query: 3 FGGETGAI 10
F GETGA+
Sbjct: 202 FEGETGAL 209


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 3 FGGETGAI 10
FG ETG +
Sbjct: 612 FGAETGVV 619


>sp|TRPG_METJA|ANTHRANILATE synthase component 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 SFGGETG 8
+FGGE G
Sbjct: 89 AFGGEVG 95


>sp|RSMA_NATPD|PROBABLE ribosomal RNA small subunit|Natronomonas pharaonis (strain ATCC

Query: 1 LSFGGETGAI 10
L GG TGA+
Sbjct: 47 LEIGGGTGAL 56


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 5 GETGAI 10
GETGAI
Sbjct: 261 GETGAI 266


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 5 GETGAI 10
GETGAI
Sbjct: 260 GETGAI 265


>sp|DEOC_THEVO|DEOXYRIBOSE-PHOSPHATE aldolase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SFGGETGA 9
S G ETGA
Sbjct: 171 SLGNETGA 178


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 5 GETGAI 10
GETGAI
Sbjct: 257 GETGAI 262


>sp|FAU1_PYRCJ|PROBABLE ribonuclease FAU-1|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LSFGGETGAI 10
L+ GGE GA+
Sbjct: 217 LAKGGEAGAV 226


>sp|PURP2_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 2|Methanosarcina mazei (strain ATCC

Query: 3 FGGETGA 9
FGG TGA
Sbjct: 283 FGGITGA 289


>sp|PELO_HYPBU|PROTEIN pelota homolog|Hyperthermus butylicus (strain DSM 5456

Query: 1 LSFGGETGA 9
++F GETG
Sbjct: 352 INFAGETGG 360


>sp|NASB_HALMT|PROBABLE nitrate transporter|Haloferax mediterranei (strain ATCC 33500

Query: 1 LSFGGETGAI 10
L+F G+TG +
Sbjct: 316 LTFAGQTGNV 325




109|SequenceR|550|541|QPKWSLSFGG

>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 WSLSFGG 10
WS+ FGG
Sbjct: 696 WSIEFGG 702


>sp|SYC_METMP|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QPKWSLSFG 9
+PKW FG
Sbjct: 190 EPKWESPFG 198


>sp|SYC_METM7|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 QPKWSLSFG 9
+PKW FG
Sbjct: 190 EPKWESPFG 198


>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 KWSLSFG 9
KWSLS G
Sbjct: 408 KWSLSIG 414


>sp|Y1020_PYRFU|PUTATIVE phosphate permease PF1020|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PKWSLSFGG 10
P+W L+ GG
Sbjct: 296 PRWILALGG 304


>sp|Y640_PYRHO|PUTATIVE phosphate permease PH0640|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PKWSLSFGG 10
P+W L+ GG
Sbjct: 291 PRWILALGG 299


>sp|Y1401_PYRAB|PUTATIVE phosphate permease PYRAB14010|Pyrococcus abyssi (strain GE5 /

Query: 2 PKWSLSFGG 10
P+W L+ GG
Sbjct: 290 PRWILALGG 298


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 KWSLSFG 9
+WS SFG
Sbjct: 248 EWSFSFG 254


>sp|Y2061_THEKO|PUTATIVE phosphate permease TK2061|Thermococcus kodakarensis (strain ATCC

Query: 2 PKWSLSFGG 10
P+W L+ GG
Sbjct: 291 PRWILAMGG 299


>sp|Y1798_ARCFU|PUTATIVE phosphate permease AF_1798|Archaeoglobus fulgidus (strain ATCC

Query: 2 PKWSLSFGG 10
P W L FGG
Sbjct: 218 PFWVLFFGG 226


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 4 WSLSFGG 10
WS FGG
Sbjct: 689 WSTEFGG 695


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 WSLSFGG 10
WS FGG
Sbjct: 689 WSTEFGG 695


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 4 WSLSFGG 10
WS FGG
Sbjct: 689 WSTEFGG 695


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 WSLSFGG 10
WS FGG
Sbjct: 689 WSTEFGG 695


>sp|SEPS_METTP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 QPKWSL 6
QP WSL
Sbjct: 355 QPDWSL 360


>sp|HTPX_PYRHO|PROTEASE HtpX homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KWSLSFGG 10
+WSL FG
Sbjct: 164 RWSLWFGA 171


>sp|HTPX_PYRFU|PROTEASE HtpX homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KWSLSFGG 10
+WSL FG
Sbjct: 164 RWSLWFGA 171


>sp|G1PDH_PYRHO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KWSLSFGG 10
KW+++ GG
Sbjct: 85 KWAIAVGG 92


>sp|G1PDH_PYRFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KWSLSFGG 10
KW+++ GG
Sbjct: 85 KWAIAVGG 92


>sp|G1PDH_PYRAB|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus abyssi (strain GE5 /

Query: 3 KWSLSFGG 10
KW+++ GG
Sbjct: 85 KWAIAVGG 92


>sp|HTPX_PYRAB|PROTEASE HtpX homolog|Pyrococcus abyssi (strain GE5 /

Query: 3 KWSLSFGG 10
+WSL FG
Sbjct: 164 RWSLWFGA 171


>sp|COXX_THEPD|PROTOHEME IX farnesyltransferase|Thermofilum pendens (strain DSM 2475

Query: 4 WSLSFGG 10
WS+ FGG
Sbjct: 134 WSVVFGG 140


>sp|Y599_METJA|UNCHARACTERIZED protein MJ0599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PKWSLSFG 9
P W+ +FG
Sbjct: 27 PNWNRNFG 34


>sp|Y2160_ARCFU|UNCHARACTERIZED protein AF_2160|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 SLSFGG 10
SLSFGG
Sbjct: 84 SLSFGG 89


>sp|SFSA_PYRCJ|SUGAR fermentation stimulation protein homolog|Pyrobaculum calidifontis

Query: 3 KWSLSFGG 10
KW L F G
Sbjct: 215 KWGLKFAG 222


>sp|FPOB_METMA|F(420)H(2) dehydrogenase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PKWSLSFG 9
PKW ++ G
Sbjct: 117 PKWVIAMG 124




110|SequenceR|555|546|IVDGPQPKWS

>sp|SYK_CENSY|LYSINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 IVDGPQPK 8
+VDGP P+
Sbjct: 415 VVDGPSPE 422


>sp|SFSA_THEAC|SUGAR fermentation stimulation protein homolog|Thermoplasma acidophilum

Query: 3 DGPQPKW 9
DGP+ KW
Sbjct: 55 DGPKLKW 61


>sp|SYK_CENSM|LYSINE--TRNA ligase|Cenarchaeum symbiosum

Query: 1 IVDGPQP 7
++DGP P
Sbjct: 414 VIDGPSP 420


>sp|MPCT_HALS3|TRANSDUCER protein MpcT|Halobacterium salinarum (strain ATCC 29341

Query: 1 IVDGPQP 7
+VD PQP
Sbjct: 583 VVDQPQP 589


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 2 VDGPQPKW 9
V PQP W
Sbjct: 896 VKSPQPSW 903


>sp|MCAL_HALMA|L-MALYL-COA/BETA-METHYLMALYL-COA lyase|Haloarcula marismortui (strain ATCC 43049

Query: 2 VDGPQPKW 9
+DG +P+W
Sbjct: 187 LDGERPRW 194


>sp|OTC_PYRCJ|ORNITHINE carbamoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 GPQPKWS 10
GP+P W+
Sbjct: 182 GPKPLWN 188


Query: 1 IVDGPQ 6
++DGPQ
Sbjct: 277 VIDGPQ 282


>sp|METE_SACI7|METHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 PQPKW 9
P+PKW
Sbjct: 16 PRPKW 20


>sp|METE_SACI6|METHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 PQPKW 9
P+PKW
Sbjct: 16 PRPKW 20


>sp|METE_SACI4|METHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 PQPKW 9
P+PKW
Sbjct: 16 PRPKW 20


>sp|METE_SACI3|METHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 5 PQPKW 9
P+PKW
Sbjct: 16 PRPKW 20


>sp|METE_SACI2|METHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 PQPKW 9
P+PKW
Sbjct: 16 PRPKW 20


>sp|METE_SACI1|METHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 PQPKW 9
P+PKW
Sbjct: 16 PRPKW 20


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 IVDGPQP 7
++DGP P
Sbjct: 567 VIDGPTP 573


>sp|OTC_PYRIL|ORNITHINE carbamoyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 IVDGPQ 6
++DGPQ
Sbjct: 277 VIDGPQ 282


>sp|OTC_PYRAE|ORNITHINE carbamoyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IVDGPQ 6
++DGPQ
Sbjct: 277 VIDGPQ 282


>sp|OTC_METS3|ORNITHINE carbamoyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 IVDGPQ 6
++DGPQ
Sbjct: 273 VIDGPQ 278


>sp|METE_SULAC|METHIONINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 PQPKW 9
P+PKW
Sbjct: 17 PRPKW 21


>sp|METE_SACS2|METHIONINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 PQPKW 9
P+PKW
Sbjct: 16 PRPKW 20


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 GPQPKW 9
GP P W
Sbjct: 59 GPDPAW 64


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 DGPQPKW 9
DG P+W
Sbjct: 273 DGADPEW 279


>sp|GGR_METAR|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocella arvoryzae (strain DSM 22066

Query: 5 PQPKW 9
P PKW
Sbjct: 60 PDPKW 64


>sp|METE_SULTO|METHIONINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 PQPKW 9
P+PKW
Sbjct: 16 PRPKW 20


>sp|GGR_METTP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 PQPKW 9
P PKW
Sbjct: 58 PDPKW 62


>sp|OTC_CENSY|ORNITHINE carbamoyltransferase|Cenarchaeum symbiosum (strain A)

Query: 1 IVDGPQ 6
++DGPQ
Sbjct: 273 VIDGPQ 278


>sp|GGR_METLZ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 PQPKW 9
P PKW
Sbjct: 60 PDPKW 64


>sp|RS11_METAR|SMALL ribosomal subunit protein uS11|Methanocella arvoryzae (strain DSM

Query: 1 IVDGPQPKWS 10
+ D PQ KW+
Sbjct: 1 MADQPQFKWA 10




111|SequenceR|560|551|DVVYGIVDGP

>sp|SYK_CENSY|LYSINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 VVYGIVDGP 10
V YG+VDGP
Sbjct: 411 VEYGVVDGP 419


>sp|SYK_CENSM|LYSINE--TRNA ligase|Cenarchaeum symbiosum

Query: 2 VVYGIVDGP 10
V YG++DGP
Sbjct: 410 VEYGVIDGP 418


>sp|T1MH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 1 DVVYGIVDGP 10
D+VYGIV P
Sbjct: 406 DLVYGIVACP 415


>sp|Y1656_ARCFU|UNCHARACTERIZED protein AF_1656|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DVVYGIVDGP 10
DV++ IVD P
Sbjct: 71 DVIFRIVDAP 80


>sp|COFH_METTH|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanothermobacter thermautotrophicus

Query: 2 VVYGIVDGP 10
++YG +DGP
Sbjct: 218 MMYGHIDGP 226


>sp|RL30_KORCO|LARGE ribosomal subunit protein uL30|Korarchaeum cryptofilum (strain

Query: 4 YGIVDGP 10
YG +DGP
Sbjct: 62 YGEIDGP 68


>sp|Y1463_METJA|UPF0128 protein MJ1463|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVVYGIVDG 9
D+++G VDG
Sbjct: 39 DLIFGKVDG 47


>sp|GLYA_HALMA|SERINE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DVVYGIVDGP 10
D++Y +VD P
Sbjct: 382 DLIYKVVDAP 391


>sp|AROD_THEAC|3-DEHYDROQUINATE dehydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DVVYGIVDGP 10
D+VY + D P
Sbjct: 199 DIVYAMADRP 208


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 DVVYGIVDGP 10
D++Y I +GP
Sbjct: 418 DLIYEISNGP 427


>sp|COXX_METS5|PROTOHEME IX farnesyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 VVYGIVDG 9
V+YGIV G
Sbjct: 232 VIYGIVAG 239


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DVVYGIVD 8
D+VY +VD
Sbjct: 561 DIVYKVVD 568


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GIVDGP 10
GI+DGP
Sbjct: 166 GIIDGP 171


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 DVVYGIVDG 9
DV+ G++DG
Sbjct: 552 DVLRGLIDG 560


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DVVYGIVDG 9
D V G+VDG
Sbjct: 36 DTVAGVVDG 44


>sp|SMC_METJA|CHROMOSOME partition protein Smc|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DVVYGI 6
DVVYG+
Sbjct: 1150 DVVYGV 1155


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DVVYGIVDG 9
D V G+VDG
Sbjct: 36 DTVAGVVDG 44


>sp|PYRH_AERPE|URIDYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DVVYGIVD 8
DV++G+VD
Sbjct: 26 DVLWGLVD 33


>sp|RL3_PYRIL|LARGE ribosomal subunit protein uL3|Pyrobaculum islandicum (strain DSM

Query: 4 YGIVDGP 10
YG+V GP
Sbjct: 292 YGVVKGP 298


>sp|RL3_PYRAE|LARGE ribosomal subunit protein uL3|Pyrobaculum aerophilum (strain ATCC

Query: 4 YGIVDGP 10
YG+V GP
Sbjct: 288 YGVVKGP 294


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DVVYGIVDG 9
D + G+VDG
Sbjct: 36 DTIAGVVDG 44


>sp|Y1845_ARCFU|UNCHARACTERIZED protein AF_1845|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VYGIVDGP 10
VY IV+GP
Sbjct: 131 VYFIVEGP 138


>sp|ACYP_SULAC|ACYLPHOSPHATASE acidocaldarius (strain ATCC 33909

Query: 2 VVYGIVDG 9
+VYGIV G
Sbjct: 10 IVYGIVQG 17


>sp|ASSY_METBA|ARGININOSUCCINATE synthase|Methanosarcina barkeri

Query: 4 YGIVDGP 10
YG+VD P
Sbjct: 311 YGLVDEP 317


>sp|ASSY_METBF|ARGININOSUCCINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 YGIVDGP 10
YG+VD P
Sbjct: 310 YGLVDEP 316


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 2 VVYGIVDG 9
V+GIVDG
Sbjct: 571 TVHGIVDG 578


>sp|HEM3_CALMQ|PROBABLE porphobilinogen deaminase|Caldivirga maquilingensis (strain ATCC

Query: 1 DVVYGIVD 8
D YG+VD
Sbjct: 254 DFTYGVVD 261


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 2 VVYGIVDG 9
V+GIVDG
Sbjct: 571 TVHGIVDG 578


>sp|RPIA_METTH|RIBOSE-5-PHOSPHATE isomerase A|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DVVYGIVDGP 10
D +G++D P
Sbjct: 179 DAAFGVIDDP 188


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 3 VYGIVDG 9
VYG+++G
Sbjct: 201 VYGLIEG 207


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 VYGIVDG 9
VYG+++G
Sbjct: 201 VYGLIEG 207


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 VYGIVDG 9
VYG+++G
Sbjct: 201 VYGLIEG 207


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 3 VYGIVDG 9
VYG+++G
Sbjct: 201 VYGLIEG 207


>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 3 VYGIVDG 9
VYG+++G
Sbjct: 201 VYGLIEG 207


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 3 VYGIVDG 9
VYG+++G
Sbjct: 201 VYGLIEG 207


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 3 VYGIVDG 9
VYG+++G
Sbjct: 201 VYGLIEG 207


>sp|ASSY_METAC|ARGININOSUCCINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 YGIVDGP 10
YG+VD P
Sbjct: 310 YGLVDEP 316




112|SequenceR|565|556|THDCWDVVYG

>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 DCWDV 7
DCWDV
Sbjct: 308 DCWDV 312


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 DCWDV 7
DCWDV
Sbjct: 308 DCWDV 312


>sp|PELO_PYRAE|PROTEIN pelota homolog|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HDCWDVVY 9
H WD++Y
Sbjct: 291 HRAWDLIY 298


>sp|HLY_NATA1|HALOLYSIN asiatica (strain ATCC 700177

Query: 5 WDVVYG 10
WDV YG
Sbjct: 142 WDVTYG 147


>sp|Y196_THEAC|PUTATIVE ankyrin repeat protein Ta0196|Thermoplasma acidophilum (strain ATCC

Query: 4 CWDVVYG 10
CW V++G
Sbjct: 121 CWAVIFG 127


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 DCWD 6
DCWD
Sbjct: 312 DCWD 315


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 DCWD 6
DCWD
Sbjct: 304 DCWD 307


>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 DCWD 6
DCWD
Sbjct: 312 DCWD 315


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 DCWD 6
DCWD
Sbjct: 312 DCWD 315


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 DCWD 6
DCWD
Sbjct: 312 DCWD 315


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 DCWD 6
DCWD
Sbjct: 312 DCWD 315


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DCWD 6
DCWD
Sbjct: 313 DCWD 316


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DCWD 6
DCWD
Sbjct: 298 DCWD 301


>sp|AOCD_METJA|ORNITHINE cyclodeaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 THDCWDVVYG 10
THD V+YG
Sbjct: 245 THDIESVLYG 254


>sp|CDPAS_METST|CDP-ARCHAEOL synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 HDCWD 6
H CWD
Sbjct: 37 HYCWD 41


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 THDCWDVVY 9
++D W+V Y
Sbjct: 518 SNDSWEVTY 526


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 HDCWDVVYG 10
HD W + YG
Sbjct: 462 HDQWFIDYG 470


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HDCWDVVYG 10
HD W + YG
Sbjct: 462 HDQWFIDYG 470


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HDCWDVVYG 10
HD W + YG
Sbjct: 462 HDQWFIDYG 470


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 HDCWDVVYG 10
HD W + YG
Sbjct: 462 HDQWFIDYG 470


>sp|RNH2_THEAC|RIBONUCLEASE HII|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DCWDVV 8
DC+DV+
Sbjct: 104 DCYDVI 109


>sp|TBP_THESM|TATA-BOX-BINDING protein|Thermococcus sibiricus (strain DSM 12597

Query: 2 HDCWDVV 8
HD W+ V
Sbjct: 162 HDAWEAV 168


>sp|TBP_THEON|TATA-BOX-BINDING protein|Thermococcus onnurineus (strain NA1)

Query: 2 HDCWDVV 8
HD W+ V
Sbjct: 165 HDAWEAV 171


>sp|TBP_THECE|TATA-BOX-BINDING protein|Thermococcus celer

Query: 2 HDCWDVV 8
HD W+ V
Sbjct: 162 HDAWEAV 168


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HDCWDVVYG 10
HD W + YG
Sbjct: 462 HDQWFIDYG 470


>sp|Y1118_ARCFU|UNCHARACTERIZED protein AF_1118|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HDCWDVVYG 10
+ W V+YG
Sbjct: 62 QNLWGVIYG 70


>sp|NADK_PICTO|NAD kinase|Picrophilus torridus (strain ATCC 700027

Query: 5 WDVVY 9
WD++Y
Sbjct: 29 WDIIY 33


>sp|SYT_THEGJ|THREONINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 THDCWD 6
THD W+
Sbjct: 392 THDFWE 397




113|SequenceR|570|561|GLVDQTHDCW

>sp|TRUD_HALMA|PROBABLE tRNA pseudouridine synthase D|Haloarcula marismortui (strain ATCC

Query: 1 GLVDQTHD 8
G VD+THD
Sbjct: 242 GYVDETHD 249


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 2 LVDQTHDC 9
+VD HDC
Sbjct: 356 IVDTAHDC 363


>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VDQTHDC 9
+D+T+DC
Sbjct: 189 IDETYDC 195


>sp|RS9_HALMA|SMALL ribosomal subunit protein uS9|Haloarcula marismortui (strain ATCC

Query: 1 GLVDQTHD 8
GLVD T+D
Sbjct: 84 GLVDHTND 91


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 VDQTHDC 9
+D+T+DC
Sbjct: 189 IDRTYDC 195


>sp|PYLC_METMA|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VDQTHDC 9
+D T+DC
Sbjct: 197 IDDTYDC 203




114|SequenceR|575|566|KWQFDGLVDQ

>sp|Y799_METJA|UNCHARACTERIZED protein MJ0799|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WQFDGLVD 9
W FD L+D
Sbjct: 28 WHFDDLID 35


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 2 WQFDGLVDQ 10
W+FD LVD+
Sbjct: 192 WKFDDLVDE 200


>sp|BGAL_SACS2|BETA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 2 WQFDGLVDQ 10
W+FD LVD+
Sbjct: 192 WKFDDLVDE 200


>sp|COBS_METKA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 QFDGLVD 9
FDGLVD
Sbjct: 76 HFDGLVD 82


>sp|HAH4_HALMT|HALOCIN-H4 mediterranei (strain ATCC 33500

Query: 1 KWQFDGL 7
KW +DGL
Sbjct: 221 KWDYDGL 227


>sp|TRPF_AERPE|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 3 QFDGLVD 9
Q DGLVD
Sbjct: 17 QLDGLVD 23


>sp|DNLI_METTP|DNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KWQFDG 6
+W+FDG
Sbjct: 244 EWKFDG 249


>sp|DNLI2_METMA|DNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KWQFDG 6
+W+FDG
Sbjct: 254 EWKFDG 259


>sp|DNLI2_METAC|DNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KWQFDG 6
+W+FDG
Sbjct: 254 EWKFDG 259


>sp|DNLI2_METBF|DNA ligase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 KWQFDG 6
+W+FDG
Sbjct: 254 EWKFDG 259


>sp|DNLI_METBU|DNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KWQFDG 6
+W+FDG
Sbjct: 260 EWKFDG 265


>sp|DNLI_ARCFU|DNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KWQFDG 6
+W+FDG
Sbjct: 247 EWKFDG 252


>sp|PELO_ARCFU|PROTEIN pelota homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KWQFDGLVDQ 10
KW DGL+ +
Sbjct: 298 KWDVDGLLRE 307


>sp|DNAG_HALLT|DNA primase DnaG|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 DGLVDQ 10
DGL+DQ
Sbjct: 459 DGLIDQ 464


>sp|SYS_HALLT|SERINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 QFDGLVDQ 10
+F+GLVD+
Sbjct: 308 RFEGLVDE 315


>sp|FLPA_ARCFU|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Archaeoglobus fulgidus (strain

Query: 2 WQFDGLVDQ 10
W++ G+V++
Sbjct: 118 WKYSGIVEK 126


>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KWQFDGLVDQ 10
K + DG++DQ
Sbjct: 98 KEEVDGVIDQ 107




115|SequenceR|580|571|NPGVNKWQFD

>sp|Y1607_METJA|UNCHARACTERIZED glycosyltransferase MJ1607|Methanocaldococcus jannaschii (strain

Query: 3 GVNKWQFD 10
G+N W+FD
Sbjct: 180 GINPWEFD 187


>sp|IF6_ARCFU|TRANSLATION initiation factor 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NPGVNKWQ 8
NP +N+W+
Sbjct: 153 NPNINEWE 160


>sp|FOLD_PYRCJ|BIFUNCTIONAL protein FolD|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 NPGVNKWQFD 10
+P KW FD
Sbjct: 247 DPATGKWYFD 256


>sp|PDXS_METKA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanopyrus kandleri (strain

Query: 4 VNKWQFD 10
+NKW+F+
Sbjct: 115 INKWEFE 121


>sp|FOLD_PYRNV|BIFUNCTIONAL protein FolD|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 NPGVNKWQFD 10
+P +W FD
Sbjct: 251 DPATKRWYFD 260


>sp|TKSU_THEKO|TK-SUBTILISIN kodakarensis (strain ATCC BAA-918

Query: 2 PGVNKWQFD 10
PGV K +FD
Sbjct: 79 PGVEKVEFD 87


>sp|PDXS_SULTO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Sulfurisphaera tokodaii (strain

Query: 4 VNKWQF 9
+NKW+F
Sbjct: 136 INKWEF 141


>sp|PDXS_SULAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Sulfolobus acidocaldarius

Query: 4 VNKWQF 9
+NKW+F
Sbjct: 156 INKWEF 161


>sp|PDXS_SACS2|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus solfataricus

Query: 4 VNKWQF 9
+NKW+F
Sbjct: 158 INKWEF 163


>sp|PDXS_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 4 VNKWQF 9
+NKW+F
Sbjct: 158 INKWEF 163


>sp|PDXS_SACI6|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 4 VNKWQF 9
+NKW+F
Sbjct: 158 INKWEF 163


>sp|PDXS_SACI4|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 4 VNKWQF 9
+NKW+F
Sbjct: 158 INKWEF 163


>sp|PDXS_SACI3|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 4 VNKWQF 9
+NKW+F
Sbjct: 158 INKWEF 163


>sp|PDXS_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 4 VNKWQF 9
+NKW+F
Sbjct: 158 INKWEF 163


>sp|PDXS_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 4 VNKWQF 9
+NKW+F
Sbjct: 158 INKWEF 163


>sp|PDXS_METS5|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Metallosphaera sedula (strain

Query: 4 VNKWQF 9
+NKW+F
Sbjct: 157 INKWEF 162


>sp|AROK_THEAC|SHIKIMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NPGVNKWQFD 10
N G+ W++D
Sbjct: 258 NQGIRYWKYD 267


>sp|FOLD_PYRAR|BIFUNCTIONAL protein FolD|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 NPGVNKWQFD 10
+P KW FD
Sbjct: 251 DPISGKWHFD 260


>sp|AQPM_ARCFU|PROBABLE aquaporin AqpM|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GVNKWQF 9
G+N WQ+
Sbjct: 215 GINLWQY 221


>sp|AQPM_METTM|AQUAPORIN AqpM|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 PGVNKWQ 8
PG++ WQ
Sbjct: 139 PGISYWQ 145


>sp|Y3401_METJA|UNCHARACTERIZED protein MJECS01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NPGVNKWQFD 10
NP + KW+++
Sbjct: 186 NPHLKKWEYN 195


>sp|Y1317_ARCFU|UNCHARACTERIZED protein AF_1317|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VNKWQFD 10
V+ W+FD
Sbjct: 24 VDNWEFD 30


>sp|AQPM_METTH|AQUAPORIN AqpM|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PGVNKWQ 8
PG+ WQ
Sbjct: 139 PGIGYWQ 145


>sp|XYLH_SULAC|XYLOSE/ARABINOSE import permease protein XylH|Sulfolobus acidocaldarius (strain ATCC

Query: 3 GVNKWQFD 10
G+N ++FD
Sbjct: 289 GINAYEFD 296


>sp|PDXS_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum aerophilum (strain

Query: 4 VNKWQF 9
+NKW F
Sbjct: 156 INKWMF 161


>sp|MCRA_METVA|METHYL-COENZYME M reductase subunit alpha|Methanococcus vannielii

Query: 1 NPGVNKW 7
N GVN W
Sbjct: 424 NAGVNGW 430


>sp|MCRA_METVO|METHYL-COENZYME M reductase subunit alpha|Methanococcus voltae

Query: 1 NPGVNKW 7
N GVN W
Sbjct: 425 NAGVNGW 431


>sp|TRM1_METKA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanopyrus kandleri

Query: 3 GVNKWQFD 10
G N W +D
Sbjct: 310 GTNPWAYD 317


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 4 VNKWQFD 10
+ KW FD
Sbjct: 419 IEKWTFD 425


>sp|CAS6_HALMT|CRISPR-ASSOCIATED endoribonuclease Cas6|Haloferax mediterranei (strain ATCC 33500

Query: 4 VNKWQFD 10
++KW+FD
Sbjct: 213 LSKWRFD 219


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 NPGVNKW 7
N G+N W
Sbjct: 424 NAGINAW 430


>sp|MCRA_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NPGVNKW 7
N GVN W
Sbjct: 424 NAGVNGW 430


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 1 NPGVNKWQFD 10
NP V WQ D
Sbjct: 131 NPHVAGWQTD 140


>sp|PANE_PYRAB|2-DEHYDROPANTOATE 2-reductase|Pyrococcus abyssi (strain GE5 /

Query: 2 PGVNKW 7
PGV KW
Sbjct: 128 PGVIKW 133




116|SequenceR|585|576|VTSTTNPGVN

>sp|TIAS_METV3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanococcus voltae (strain

Query: 3 STTNPGV 9
STTNPG+
Sbjct: 171 STTNPGI 177


>sp|RS3_SULTO|SMALL ribosomal subunit protein uS3|Sulfurisphaera tokodaii (strain DSM

Query: 1 VTSTTNPGVN 10
VTS NP +N
Sbjct: 83 VTSVENPELN 92


>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 2 TSTTNPGVN 10
T TTN GVN
Sbjct: 363 TGTTNGGVN 371


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 2 TSTTNPGVN 10
T TTN GVN
Sbjct: 363 TGTTNGGVN 371




117|SequenceR|590|581|ADTSIVTSTT

>sp|Y1137_METTH|UNCHARACTERIZED protein MTH_1137|Methanothermobacter thermautotrophicus (strain

Query: 1 ADTSIVTST 9
AD+SIV++T
Sbjct: 478 ADSSIVSTT 486


>sp|GUAAA_METBU|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcoides

Query: 2 DTSIVTSTT 10
DT IV +TT
Sbjct: 29 DTKIVANTT 37




118|SequenceR|595|586|VGPRFADTSI

>sp|GPDA_METTH|GLYCEROL-3-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 2 GPRFADTSI 10
GP FAD I
Sbjct: 132 GPNFADELI 140


>sp|RNZ_THEAC|RIBONUCLEASE Z|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PRFADTSI 10
PR DTS+
Sbjct: 270 PRITDTSV 277




119|SequenceR|600|591|RFDYRVGPRF

>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RFDYRVGPRF 10
RF+ RVG RF
Sbjct: 233 RFEGRVGDRF 242


>sp|SYY_HALLT|TYROSINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 FDYRVGPRF 10
F+Y V PRF
Sbjct: 262 FEYHVFPRF 270


>sp|Y1181_METJA|UNCHARACTERIZED protein MJ1181|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RFDYRVGP 8
+FDYR+ P
Sbjct: 146 KFDYRLEP 153


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 3 DYRVGP 8
DYRVGP
Sbjct: 453 DYRVGP 458


>sp|SYY_HALSA|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 FDYRVGPRF 10
F Y V PRF
Sbjct: 257 FQYHVFPRF 265


>sp|SYY_HALS3|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 FDYRVGPRF 10
F Y V PRF
Sbjct: 257 FQYHVFPRF 265


>sp|G6PI_HALSA|PROBABLE glucose-6-phosphate isomerase|Halobacterium salinarum (strain ATCC

Query: 4 YRVGPR 9
YR GPR
Sbjct: 299 YRAGPR 304


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 RFDYRVGPR 9
R DYR+G +
Sbjct: 1468 RVDYRIGEK 1476


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 YRVGPRF 10
Y+VGP F
Sbjct: 37 YKVGPDF 43


>sp|DSRB_ARCFU|SULFITE reductase, dissimilatory-type subunit beta|Archaeoglobus fulgidus

Query: 3 DYRVGPRF 10
DYR+ P F
Sbjct: 347 DYRITPYF 354


>sp|RNP4_AERPE|RIBONUCLEASE P protein component 4|Aeropyrum pernix (strain ATCC 700893

Query: 1 RFDYRVGPR 9
R+ YR GPR
Sbjct: 104 RYPYRKGPR 112


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RFDYRVG 7
+FDY VG
Sbjct: 397 QFDYEVG 403


>sp|PURL_METS5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Metallosphaera sedula (strain ATCC 51363

Query: 1 RFDYRVG 7
+FDY VG
Sbjct: 397 QFDYEVG 403


>sp|AROC_METM7|CHORISMATE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 FDYRVGPRF 10
FDY P+F
Sbjct: 165 FDYYKNPKF 173


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RFDYRVG 7
+FDY VG
Sbjct: 399 QFDYEVG 405


>sp|CAS6_HALMT|CRISPR-ASSOCIATED endoribonuclease Cas6|Haloferax mediterranei (strain ATCC 33500

Query: 1 RFDYRV 6
RFDYRV
Sbjct: 217 RFDYRV 222


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 RFDYRVGPR 9
R DYR+G +
Sbjct: 1102 RVDYRIGEK 1110


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 RFDYRVGPR 9
R DYR+G +
Sbjct: 1071 RVDYRIGEK 1079


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 YRVGPRF 10
Y+VGP F
Sbjct: 43 YKVGPDF 49




120|SequenceR|605|596|SLGYIRFDYR

>sp|Y1181_METJA|UNCHARACTERIZED protein MJ1181|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SLGYIRFDYR 10
S+ +I+FDYR
Sbjct: 141 SIEHIKFDYR 150


>sp|PIMT_METKA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 SLGYIR 6
SLGYIR
Sbjct: 21 SLGYIR 26


>sp|SYR_METBU|ARGININE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SLGYIRFD 8
+LGY FD
Sbjct: 171 ALGYFEFD 178


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 4 YIRFDY 9
Y+RFD+
Sbjct: 631 YVRFDF 636


>sp|CBIA_SULTO|COBYRINATE a,c-diamide synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LGYIRFD 8
LGYI++D
Sbjct: 168 LGYIKYD 174


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain ATCC

Query: 1 SLGYIRFDYR 10
+LG + DYR
Sbjct: 1029 ALGQVEVDYR 1038


>sp|TRM1_METMP|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 SLGYIRFD 8
+LGYIR D
Sbjct: 238 NLGYIRQD 245


>sp|TRM1_METMI|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 SLGYIRFD 8
+LGYIR D
Sbjct: 238 NLGYIRQD 245


>sp|TRM1_METM7|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 SLGYIRFD 8
+LGYIR D
Sbjct: 238 NLGYIRQD 245


>sp|TRM1_METM5|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 SLGYIRFD 8
+LGYIR D
Sbjct: 238 NLGYIRQD 245


>sp|TRM1_METM6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 SLGYIRFD 8
+LGYIR D
Sbjct: 238 NLGYIRQD 245


>sp|AROE_SULAC|SHIKIMATE dehydrogenase (NADP(+))|Sulfolobus acidocaldarius (strain ATCC

Query: 4 YIRFDYR 10
Y+RFD R
Sbjct: 40 YLRFDVR 46


>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 2 LGYIRFDY 9
LGY+ F Y
Sbjct: 660 LGYVLFKY 667




121|SequenceR|610|601|AIRKTSLGYI

>sp|CMR6_PYRFU|CRISPR system Cmr subunit Cmr6|Pyrococcus furiosus (strain ATCC 43587

Query: 4 KTSLGY 9
KTSLGY
Sbjct: 328 KTSLGY 333


>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AIRKTSLGY 9
AIRK +GY
Sbjct: 321 AIRKPIIGY 329


>sp|ARFB_METFV|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermus fervidus (strain ATCC

Query: 4 KTSLGYI 10
+TSLGY+
Sbjct: 160 ETSLGYV 166




122|SequenceR|615|606|KELLCAIRKT

>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KELLCAIRK 9
KE++ A+RK
Sbjct: 719 KEIVAAVRK 727




123|SequenceR|620|611|SYGTKKELLC

>sp|Y1221_METJA|UNCHARACTERIZED protein MJ1221|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GTKKELLC 10
G KKELLC
Sbjct: 173 GMKKELLC 180


>sp|FLAK_METJA|PREFLAGELLIN peptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 TKKELLC 10
TKKE+LC
Sbjct: 145 TKKEVLC 151


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 SYGTKKELLC 10
++GT E+LC
Sbjct: 249 NFGTGAEMLC 258


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 2 YGTKKE 7
YGTKKE
Sbjct: 487 YGTKKE 492


>sp|Y706_METJA|UNCHARACTERIZED protein MJ0706|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YGTKKELL 9
+GTK+E+L
Sbjct: 170 FGTKREVL 177


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 GTKKELL 9
GT+KELL
Sbjct: 722 GTRKELL 728


>sp|TRUD_METBF|PROBABLE tRNA pseudouridine synthase D|Methanosarcina barkeri (strain Fusaro

Query: 1 SYGTKKELL 9
S GT++ELL
Sbjct: 381 SKGTRRELL 389


>sp|XPB2_SULTO|DNA 3'-5' translocase XPB2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YGTKKELL 9
YGTK++ L
Sbjct: 397 YGTKRQFL 404


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC

Query: 1 SYGTKKEL 8
S+GTK+E+
Sbjct: 90 SFGTKEEI 97


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 GTKKELL 9
GT+KELL
Sbjct: 731 GTRKELL 737


>sp|Y1472_METJA|UNCHARACTERIZED protein MJ1472|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SYGTKKELL 9
+YGT+ EL+
Sbjct: 333 TYGTRYELI 341


>sp|Y417_ARCFU|UNCHARACTERIZED protein AF_0417|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SYGTKKE 7
SYG KKE
Sbjct: 136 SYGFKKE 142


>sp|NNR_THEPD|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Thermofilum pendens (strain DSM

Query: 2 YGTKKELL 9
YG K+E+L
Sbjct: 20 YGVKEEIL 27


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 3 GTKKEL 8
GTKKEL
Sbjct: 68 GTKKEL 73


>sp|DGGGP_METST|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 YGTKKELL 9
YGTKK ++
Sbjct: 189 YGTKKAVM 196


>sp|SPEH_ARCFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YGTKKELL 9
YG K+EL+
Sbjct: 12 YGVKEELI 19




124|SequenceR|625|616|PALEQSYGTK

>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PALEQSYG 8
P EQSYG
Sbjct: 449 PEPEQSYG 456


>sp|APGM_IGNH4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PALEQSYGTK 10
P L++ YG K
Sbjct: 242 PTLQERYGIK 251


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PALEQSYGT 9
PA++ S+GT
Sbjct: 255 PAVDPSFGT 263




125|SequenceR|630|621|HPNDSPALEQ

>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 HPNDSPAL 8
HP D PAL
Sbjct: 89 HPQDVPAL 96


>sp|DPOL_PYRAB|DNA polymerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 HPNDSPALEQ 10
HP D PA+ +
Sbjct: 89 HPQDVPAIRE 98


>sp|DPOL_PYRAY|DNA polymerase 1|Pyrococcus abyssi

Query: 1 HPNDSPALEQ 10
HP D PA+ +
Sbjct: 89 HPQDVPAIRE 98


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 HPNDSPAL 8
HP D PA+
Sbjct: 89 HPQDVPAM 96


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NDSPALEQ 10
ND+PAL Q
Sbjct: 586 NDAPALAQ 593


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 3 NDSPALEQ 10
ND+PAL Q
Sbjct: 621 NDAPALAQ 628


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HPNDSPAL 8
HP D PA+
Sbjct: 89 HPQDVPAI 96


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 HPNDSPAL 8
HP D PA+
Sbjct: 56 HPQDVPAI 63


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 HPNDSPAL 8
HP D PA+
Sbjct: 89 HPQDVPAI 96


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 1 HPNDSPAL 8
HP D PA+
Sbjct: 89 HPQDVPAI 96


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 HPNDSPAL 8
HP D PA+
Sbjct: 89 HPQDVPAI 96


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HPNDSPAL 8
HP D PA+
Sbjct: 89 HPQDVPAI 96


>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 1 HPNDSPAL 8
HP D PA+
Sbjct: 89 HPQDVPAI 96


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 1 HPNDSPAL 8
HP D PA+
Sbjct: 89 HPQDVPAI 96


>sp|DPOL_PYRGL|DNA polymerase|Pyrococcus glycovorans

Query: 1 HPNDSPAL 8
HP D PA+
Sbjct: 89 HPQDVPAI 96


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 1 HPNDSPAL 8
HP D PA+
Sbjct: 89 HPQDVPAI 96


>sp|Y284_METJA|UNCHARACTERIZED protein MJ0284|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HPNDSPALEQ 10
HPN LEQ
Sbjct: 17 HPNPKADLEQ 26


>sp|PELO_AERPE|PROTEIN pelota homolog|Aeropyrum pernix (strain ATCC 700893

Query: 2 PNDSPALEQ 10
P DSPA E+
Sbjct: 326 PGDSPAGER 334


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 HPNDSP 6
HP DSP
Sbjct: 511 HPPDSP 516


>sp|CUTA_PYRHO|DIVALENT-CATION tolerance protein CutA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HPNDSPAL 8
HP D PA+
Sbjct: 73 HPYDVPAI 80


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 3 NDSPALEQ 10
ND+PAL++
Sbjct: 561 NDAPALKK 568


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 HPNDSPALE 9
+PND P E
Sbjct: 556 YPNDFPMFE 564


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 HPNDSPALE 9
H ND+P +E
Sbjct: 39 HCNDAPCVE 47


>sp|Y798_METJA|TPR repeat-containing protein MJ0798|Methanocaldococcus jannaschii

Query: 1 HPNDSPALE 9
+PND ALE
Sbjct: 199 NPNDVEALE 207


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 1 HPNDSPALEQ 10
HP D P + +
Sbjct: 89 HPQDVPTIRE 98


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HPNDSPALEQ 10
HP D P + +
Sbjct: 89 HPQDVPTIRE 98


>sp|Y1063_METPE|UPF0173 metal-dependent hydrolase Mpal_1063|Methanosphaerula palustris

Query: 1 HPNDSPALEQ 10
H N PA+EQ
Sbjct: 181 HYNTWPAIEQ 190


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 2 PNDSPALEQ 10
PN SPAL +
Sbjct: 393 PNVSPALRE 401




126|SequenceR|635|626|TDVLVHPNDS

>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 DVLVHPN 8
D L+HPN
Sbjct: 242 DYLIHPN 248


>sp|FUMC_HALSA|FUMARATE hydratase class II|Halobacterium salinarum (strain ATCC 700922

Query: 2 DVLVHPND 9
D +VHPND
Sbjct: 125 DRVVHPND 132


>sp|LONB_METTH|ARCHAEAL Lon protease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 DVLVHPN 8
D+LV+PN
Sbjct: 95 DILVYPN 101


>sp|AATE_THEPD|A-TYPE ATP synthase subunit E|Thermofilum pendens (strain DSM 2475

Query: 1 TDVLVHP 7
TD++VHP
Sbjct: 130 TDLVVHP 136


>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 DVLVHPND 9
+VLVH ND
Sbjct: 437 EVLVHEND 444


>sp|NTPPA_PYRFU|DTTP/UTP pyrophosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DVLVHPND 9
D++VHP++
Sbjct: 22 DIIVHPSN 29


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VLVHPND 9
+LVHP D
Sbjct: 224 ILVHPED 230


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 VLVHPNDS 10
V+ HP+DS
Sbjct: 226 VIFHPDDS 233


>sp|LONB_ARCFU|ARCHAEAL Lon protease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DVLVHPN 8
D+LV+PN
Sbjct: 78 DILVYPN 84


>sp|SECD_THEGJ|PROTEIN-EXPORT membrane protein SecD|Thermococcus gammatolerans (strain DSM 15229

Query: 1 TDVLVHPND 9
TDV VH +D
Sbjct: 132 TDVTVHSSD 140


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 VLVHPND 9
++VHP+D
Sbjct: 215 IIVHPDD 221


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VLVHPND 9
V VHP+D
Sbjct: 222 VFVHPDD 228


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VLVHPND 9
V VHP+D
Sbjct: 222 VFVHPDD 228


>sp|ARGX_SULTO|GLUTAMATE--LYSW ligase ArgX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DVLVHPN 8
D+L HPN
Sbjct: 237 DILEHPN 243


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 VLVHPND 9
V VHP+D
Sbjct: 222 VFVHPDD 228


>sp|FUMC_SACS2|FUMARATE hydratase class II|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TDVLVHPND 9
+++ VHPND
Sbjct: 96 SNLKVHPND 104


>sp|GLKA_THELN|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus litoralis (strain ATCC

Query: 4 LVHPNDS 10
LVHP D+
Sbjct: 169 LVHPKDA 175


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 VLVHPND 9
V+VHP+D
Sbjct: 227 VVVHPDD 233


>sp|Y868_METJA|UNCHARACTERIZED protein MJ0868|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TDVLVHPND 9
TDVL H ND
Sbjct: 54 TDVLKHYND 62


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 VHPND 9
VHPND
Sbjct: 140 VHPND 144


>sp|COFH_METKA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 TDVLVH 6
TDVLVH
Sbjct: 277 TDVLVH 282


>sp|RNP3_METBU|RIBONUCLEASE P protein component 3|Methanococcoides burtonii (strain DSM 6242

Query: 2 DVLVHP 7
D+L+HP
Sbjct: 106 DILIHP 111


>sp|EF1A_SACS2|ELONGATION factor 1-alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DVLVHPND 9
DV+ HPN+
Sbjct: 311 DVVGHPNN 318


>sp|CDC61_METMA|ORC1-TYPE DNA replication protein 1|Methanosarcina mazei (strain ATCC

Query: 2 DVLVHPND 9
D+L+H ND
Sbjct: 34 DLLLHRND 41




127|SequenceR|640|631|SHSTLTDVLV

>sp|TRPF_METTH|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 SHSTLTDVLV 10
SH +L DVLV
Sbjct: 4 SHESLADVLV 13


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 1 SHSTLTDVL 9
+HS +TDVL
Sbjct: 166 THSEVTDVL 174




128|SequenceR|645|636|WSLTFSHSTL

>sp|METAA_METII|HOMOSERINE O-acetyltransferase|Methanomassiliicoccus intestinalis (strain

Query: 1 WSLTFSHSTL 10
WSLT S ST+
Sbjct: 130 WSLTNSFSTM 139


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WSLTFSHST 9
W+ + HST
Sbjct: 118 WTFIYDHST 126


>sp|AGLE_HALVD|GLYCOSYLTRANSFERASE AglE|Haloferax volcanii (strain ATCC 29605

Query: 1 WSLTFSHSTL 10
+SLTF+H +
Sbjct: 196 YSLTFAHDVI 205


>sp|NREA_ARCFU|DNA repair protein NreA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WSLTFSHSTL 10
WS+T HS +
Sbjct: 214 WSITAVHSIV 223


>sp|TDXH_THEVO|PEROXIREDOXIN volcanium (strain ATCC 51530

Query: 1 WSLTFSH 7
W L FSH
Sbjct: 30 WVLLFSH 36


>sp|TDXH2_THEAC|PEROXIREDOXIN 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WSLTFSH 7
W L FSH
Sbjct: 26 WVLLFSH 32


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 1 WSLTFSHSTL 10
W+L + H TL
Sbjct: 466 WNLGWMHDTL 475


>sp|TDXH2_PICTO|PEROXIREDOXIN 2|Picrophilus torridus (strain ATCC 700027

Query: 1 WSLTFSH 7
W L FSH
Sbjct: 30 WVLLFSH 36




129|SequenceR|650|641|TSYDKWSLTF

>sp|RNH_HALSA|RIBONUCLEASE HI|Halobacterium salinarum (strain ATCC 700922

Query: 1 TSYDKWSLT 9
T +D WS+T
Sbjct: 170 TGFDDWSIT 178


>sp|PDXT_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 2 SYDKWSL 8
++DKWS+
Sbjct: 22 AFDKWSI 28


>sp|PDXT_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 2 SYDKWSL 8
++DKWS+
Sbjct: 22 AFDKWSI 28


>sp|PDXT_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 2 SYDKWSL 8
++DKWS+
Sbjct: 22 AFDKWSI 28


>sp|RS10_METVS|SMALL ribosomal subunit protein uS10|Methanococcus vannielii (strain

Query: 1 TSYDKWSL 8
+S+D+W++
Sbjct: 59 SSFDRWTM 66


>sp|RS10_METMP|SMALL ribosomal subunit protein uS10|Methanococcus maripaludis (strain

Query: 1 TSYDKWSL 8
+S+D+W++
Sbjct: 59 SSFDRWTM 66


>sp|RS10_METM7|SMALL ribosomal subunit protein uS10|Methanococcus maripaludis (strain

Query: 1 TSYDKWSL 8
+S+D+W++
Sbjct: 59 SSFDRWTM 66


>sp|RS10_METM6|SMALL ribosomal subunit protein uS10|Methanococcus maripaludis (strain

Query: 1 TSYDKWSL 8
+S+D+W++
Sbjct: 59 SSFDRWTM 66


>sp|RS10_METM5|SMALL ribosomal subunit protein uS10|Methanococcus maripaludis (strain

Query: 1 TSYDKWSL 8
+S+D+W++
Sbjct: 59 SSFDRWTM 66


>sp|RS10_META3|SMALL ribosomal subunit protein uS10|Methanococcus aeolicus (strain

Query: 1 TSYDKWSL 8
+S+D+W++
Sbjct: 59 SSFDRWTM 66


>sp|RS8_PYRHO|SMALL ribosomal subunit protein uS8|Pyrococcus horikoshii (strain ATCC

Query: 1 TSYDKWSLTF 10
T Y+KW F
Sbjct: 84 TEYEKWEKRF 93


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 3 YDKWSL 8
YD WSL
Sbjct: 430 YDNWSL 435


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 2 SYDKWSLTF 10
S D W LT+
Sbjct: 518 SNDSWGLTY 526


>sp|RS7_METST|SMALL ribosomal subunit protein uS7|Methanosphaera stadtmanae (strain

Query: 3 YDKWSLT 9
+DKW +T
Sbjct: 6 FDKWDVT 12


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 1 TSYDKWSLTF 10
T+YD LTF
Sbjct: 383 TAYDNRPLTF 392


>sp|MTAP_THEAC|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TSYDKWS 7
T YD WS
Sbjct: 207 TDYDVWS 213


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 SYDKW 6
+YDKW
Sbjct: 108 AYDKW 112


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 2 SYDKW 6
SYDKW
Sbjct: 458 SYDKW 462


>sp|Y1544_METJA|UNCHARACTERIZED protein MJ1544|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KWSLTF 10
KWSLT+
Sbjct: 436 KWSLTY 441


>sp|MEND_NATPD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SYDKWSLT 9
S+DKW T
Sbjct: 511 SFDKWFRT 518


>sp|Y754_METJA|UNCHARACTERIZED protein MJ0754|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TSYDKWSL 8
T Y+KW L
Sbjct: 37 TLYNKWKL 44




130|SequenceR|655|646|GPQSETSYDK

>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PQSETSYD 9
PQ ET YD
Sbjct: 247 PQFETKYD 254


>sp|DNLI_META3|DNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GPQSETSYD 9
PQ ET YD
Sbjct: 248 APQFETKYD 256


>sp|TRPA_SACS2|TRYPTOPHAN synthase alpha chain|Saccharolobus solfataricus (strain ATCC

Query: 1 GPQSETSYDK 10
GP SYDK
Sbjct: 49 GPVIRKSYDK 58




131|SequenceR|660|651|YGQIFGPQSE

>sp|AROA_METBU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 YGQIFGPQSE 10
+G+IF P S+
Sbjct: 11 HGEIFAPASK 20


>sp|RL1_CENSY|LARGE ribosomal subunit protein uL1|Cenarchaeum symbiosum (strain A)

Query: 2 GQIFGPQSE 10
GQI GP+ +
Sbjct: 119 GQILGPRGK 127


>sp|EF2_METB6|ELONGATION factor 2|Methanoregula boonei (strain DSM 21154

Query: 2 GQIFGPQSE 10
GQ+F QSE
Sbjct: 650 GQVFDMQSE 658


>sp|RL3_NANEQ|LARGE ribosomal subunit protein uL3|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 YGQIFGP 7
YGQ+ GP
Sbjct: 272 YGQVIGP 278


>sp|FAEHP_METBF|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina barkeri (strain Fusaro /

Query: 2 GQIFGP 7
G+IFGP
Sbjct: 76 GKIFGP 81


>sp|AROA_SULTO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Sulfurisphaera tokodaii (strain DSM

Query: 1 YGQIFGPQSE 10
YG++ PQS+
Sbjct: 11 YGKVKAPQSK 20


>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 YGQIFGPQSE 10
YG IFG + +
Sbjct: 92 YGSIFGTKGK 101


>sp|RFCL_SACI7|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 YGQIFGPQSE 10
YG IFG + +
Sbjct: 92 YGSIFGTRGK 101


>sp|RFCL_SACI6|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 YGQIFGPQSE 10
YG IFG + +
Sbjct: 92 YGSIFGTRGK 101


>sp|RFCL_SACI4|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 YGQIFGPQSE 10
YG IFG + +
Sbjct: 92 YGSIFGTRGK 101


>sp|RFCL_SACI3|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 YGQIFGPQSE 10
YG IFG + +
Sbjct: 92 YGSIFGTRGK 101


>sp|RFCL_SACI2|REPLICATION factor C large subunit|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 YGQIFGPQSE 10
YG IFG + +
Sbjct: 92 YGSIFGTRGK 101


>sp|RFCL_SACI1|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 YGQIFGPQSE 10
YG IFG + +
Sbjct: 92 YGSIFGTRGK 101


>sp|NEP_NATMA|HALOLYSIN-LIKE extracellular serine protease Nep|Natrialba magadii

Query: 1 YGQIFGPQ 8
YGQ + PQ
Sbjct: 127 YGQQYAPQ 134


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YGQIFGP 7
YG+ FGP
Sbjct: 401 YGECFGP 407


>sp|HLY_NATA1|HALOLYSIN asiatica (strain ATCC 700177

Query: 1 YGQIFGPQ 8
YGQ + PQ
Sbjct: 127 YGQQYAPQ 134


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 1 YGQIFG 6
YGQI+G
Sbjct: 192 YGQIYG 197


>sp|Y157_METAC|UPF0251 protein MA_0157|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 FGPQSE 10
FGP+SE
Sbjct: 21 FGPESE 26


>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 2 GQIFGP 7
G++FGP
Sbjct: 410 GEVFGP 415




132|SequenceR|665|656|KLYVHYGQIF

>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 3 YVHYGQIF 10
++HYGQI+
Sbjct: 189 FMHYGQIY 196


>sp|PHR_METTH|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 YVHYGQI 9
Y+H+GQI
Sbjct: 253 YLHFGQI 259


>sp|Y1005_PYRIL|PROTEIN Pisl_1005|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KLYVHYGQIF 10
KLY++ QIF
Sbjct: 181 KLYIYEAQIF 190


>sp|Y745_PYRAE|PROTEIN PAE0745|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KLYVHYGQIF 10
KLY++ QIF
Sbjct: 181 KLYIYEAQIF 190


>sp|Y011_PYRAR|PROTEIN Pars_0011|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KLYVHYGQIF 10
KLY++ QIF
Sbjct: 181 KLYIYEAQIF 190


>sp|ILVC_NATPD|KETOL-ACID reductoisomerase (NADP(+))|Natronomonas pharaonis (strain ATCC

Query: 4 VHYGQI 9
+HYGQI
Sbjct: 113 IHYGQI 118


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 4 VHYGQI 9
+HYGQI
Sbjct: 111 IHYGQI 116


>sp|ILVC_HALMA|KETOL-ACID reductoisomerase (NADP(+))|Haloarcula marismortui (strain ATCC

Query: 4 VHYGQI 9
+HYGQI
Sbjct: 116 IHYGQI 121


>sp|ILVC_METPE|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaerula palustris (strain ATCC

Query: 4 VHYGQI 9
+HYGQI
Sbjct: 111 IHYGQI 116


>sp|YPV8_METTF|UNCHARACTERIZED protein ORF8|Methanothermobacter thermautotrophicus

Query: 3 YVHYGQI 9
++HYGQ+
Sbjct: 181 HIHYGQL 187


>sp|Y441_NANEQ|PROTEIN NEQ441|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 KLYVHYGQIF 10
++YV GQIF
Sbjct: 168 EVYVFEGQIF 177


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 KLYVHYGQI 9
K+Y+H G+I
Sbjct: 475 KIYLHMGRI 483


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 3 YVHYGQIF 10
Y HYG +F
Sbjct: 65 YGHYGPLF 72


>sp|KATG_HALSA|CATALASE-PEROXIDASE salinarum (strain ATCC 700922

Query: 3 YVHYGQIF 10
Y HYG +F
Sbjct: 70 YGHYGPLF 77


>sp|KATG_HALS3|CATALASE-PEROXIDASE salinarum (strain ATCC 29341

Query: 3 YVHYGQIF 10
Y HYG +F
Sbjct: 70 YGHYGPLF 77


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 3 YVHYGQIF 10
Y HYG +F
Sbjct: 83 YGHYGPLF 90


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 3 YVHYGQIF 10
Y HYG +F
Sbjct: 80 YGHYGPLF 87


>sp|THII_ARCFU|PROBABLE tRNA sulfurtransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VHYGQI 9
VHYG+I
Sbjct: 8 VHYGEI 13


>sp|Y2425_METAR|PROTEIN UNCMA_24250|Methanocella arvoryzae (strain DSM 22066

Query: 1 KLYVHYGQIF 10
K+Y GQIF
Sbjct: 174 KIYTFGGQIF 183


>sp|LIVF_ARCFU|PROBABLE branched-chain amino acid transport|Archaeoglobus fulgidus

Query: 4 VHYGQIF 10
VH GQ+F
Sbjct: 53 VHSGQVF 59


>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 LYVHYGQI 9
+++HYG++
Sbjct: 315 VFIHYGRL 322


>sp|HOSA_PYRHO|HOMOCITRATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LYVHYG 7
LY HYG
Sbjct: 234 LYYHYG 239


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 YVHYGQI 9
Y HYG I
Sbjct: 318 YYHYGMI 324


>sp|Y1303_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ1303|Methanocaldococcus jannaschii

Query: 1 KLYVHYGQI 9
+LY+H G +
Sbjct: 318 RLYIHKGNL 326


>sp|SYE_METTH|GLUTAMATE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 YVHYGQI 9
++HYG++
Sbjct: 317 FIHYGRL 323


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 YVHYGQI 9
++HYG++
Sbjct: 318 FIHYGRL 324


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 YVHYGQI 9
++HYG++
Sbjct: 317 FIHYGRL 323


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 YVHYGQI 9
Y HYG I
Sbjct: 318 YYHYGMI 324


>sp|Y3534_METJA|UNCHARACTERIZED protein MJECL34|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLYVHYGQ 8
KLYV+Y +
Sbjct: 12 KLYVYYDE 19




133|SequenceR|670|661|QRAKSKLYVH

>sp|FRHA_METJA|COENZYME F420 hydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 QRAKSKLY 8
+RAKS+LY
Sbjct: 173 ERAKSRLY 180


>sp|TOP6B_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QRAKSKLY 8
QRAK K+Y
Sbjct: 180 QRAKQKIY 187


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RAKSKLYV 9
RAK +LYV
Sbjct: 999 RAKKRLYV 1006




134|SequenceR|675|666|FRPHCQRAKS

>sp|AROC_IGNH4|CHORISMATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PHCQR 7
PHCQR
Sbjct: 366 PHCQR 370


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PHCQRAKS 10
PHC R K+
Sbjct: 402 PHCWRCKT 409


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PHCQRAKS 10
PHC R K+
Sbjct: 402 PHCWRCKT 409


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PHCQRAKS 10
PHC R K+
Sbjct: 402 PHCWRCKT 409


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 PHCQRAKS 10
PHC R K+
Sbjct: 402 PHCWRCKT 409


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PHCQRAKS 10
PHC R K+
Sbjct: 403 PHCWRCKT 410


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PHCQRAKS 10
PHC R K+
Sbjct: 403 PHCWRCKT 410


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PHCQRAKS 10
PHC R K+
Sbjct: 408 PHCWRCKT 415


>sp|Y976_METJA|UNCHARACTERIZED protein MJ0976|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FRPHCQRAKS 10
FR H +RA++
Sbjct: 19 FRSHIERAEN 28


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PHCQRAKS 10
PHCQ S
Sbjct: 257 PHCQMLAS 264


>sp|TRUD_NATPD|PROBABLE tRNA pseudouridine synthase D|Natronomonas pharaonis (strain ATCC

Query: 2 RPHCQRAKS 10
R HC+R ++
Sbjct: 335 RRHCERGRA 343




135|SequenceR|680|671|LVAKEFRPHC

>sp|SYR_METBU|ARGININE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 AKEFRPH 9
AKE RPH
Sbjct: 501 AKELRPH 507


>sp|RL2_PICTO|LARGE ribosomal subunit protein uL2|Picrophilus torridus (strain ATCC

Query: 2 VAKEFRPHC 10
V KEF P C
Sbjct: 139 VNKEFHPRC 147


>sp|CAS1A_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 KEFRPH 9
+EFRPH
Sbjct: 234 EEFRPH 239


>sp|SYR_METBF|ARGININE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LVAKEFRPH 9
L A+E +PH
Sbjct: 501 LAARELKPH 509


>sp|Y763_ARCFU|UNCHARACTERIZED protein AF_0763|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VAKEFRP 8
++KEFRP
Sbjct: 73 ISKEFRP 79


>sp|SYE_HALWD|GLUTAMATE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 EFRPH 9
EFRPH
Sbjct: 45 EFRPH 49


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis

Query: 1 LVAKEFRPH 9
L+ K+FR H
Sbjct: 6 LIIKDFRSH 14


>sp|RL2_THEGJ|LARGE ribosomal subunit protein uL2|Thermococcus gammatolerans (strain

Query: 4 KEFRPHC 10
K+F+P C
Sbjct: 149 KQFKPEC 155


>sp|OTC_PYRCJ|ORNITHINE carbamoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LVAKEFRPH 9
L EF+PH
Sbjct: 5 LTLMEFKPH 13


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 AKEFRPHC 10
+KEF PH
Sbjct: 302 SKEFEPHV 309


>sp|TRPA_PYRFU|TRYPTOPHAN synthase alpha chain|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VAKEFRPH 9
+ KEFR H
Sbjct: 71 IVKEFRRH 78


>sp|SPEH_ARCFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VAKEFRPH 9
V K+F PH
Sbjct: 44 VYKQFNPH 51




136|SequenceR|685|676|ESGDSLVAKE

>sp|TRUD2_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain DSM

Query: 1 ESGDSLVAKE 10
E+GDSL A++
Sbjct: 209 ETGDSLEARQ 218


>sp|TRUD_METM5|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain C5

Query: 1 ESGDSLVAKE 10
E+GDSL A++
Sbjct: 209 ETGDSLEARQ 218


>sp|PURP_METJA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocaldococcus jannaschii (strain

Query: 1 ESGDSLVAK 9
E GD LVAK
Sbjct: 273 EMGDKLVAK 281




137|SequenceR|690|681|KYKCCESGDS

>sp|NTPTH_PYRCJ|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KYKCC 5
KY+CC
Sbjct: 36 KYRCC 40


>sp|DCDA_METTH|DIAMINOPIMELATE decarboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 CESGD 9
CESGD
Sbjct: 350 CESGD 354


>sp|DCDA_ARCFU|DIAMINOPIMELATE decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 CESGD 9
CESGD
Sbjct: 343 CESGD 347


>sp|CYSC_AERPE|PROBABLE adenylyl-sulfate kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 YKCCESG 8
YKC E G
Sbjct: 4 YKCIEKG 10


>sp|Y1620_METJA|UNCHARACTERIZED protein MJ1620|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YKCCESGD 9
Y CESGD
Sbjct: 325 YIGCESGD 332


>sp|Y150_METJA|UNCHARACTERIZED protein MJ0150|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KCCESGD 9
KCC GD
Sbjct: 152 KCCGKGD 158


>sp|SYW_THEKO|TRYPTOPHAN--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KYKCCESGD 9
+Y+ C++G+
Sbjct: 320 RYRACKAGE 328


>sp|TRUB_PICTO|PROBABLE tRNA pseudouridine synthase B|Picrophilus torridus (strain ATCC

Query: 4 CCESG 8
CCESG
Sbjct: 132 CCESG 136




138|SequenceR|695|686|EPNDIKYKCC

>sp|BIOF_METVS|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus vannielii (strain

Query: 1 EPNDIKYKC 9
E ND KY C
Sbjct: 354 EKNDFKYLC 362


>sp|FSX1_HALSH|FUSEXIN 1|Haloplanus natans (strain DSM 17983

Query: 3 NDIKYKC 9
NDI+Y C
Sbjct: 510 NDIQYDC 516


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 1 EPNDIKYKCC 10
+PN+I + CC
Sbjct: 92 DPNEIGFFCC 101


>sp|G3P_THEON|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 1 EPNDIKY 7
+PNDIK+
Sbjct: 170 DPNDIKH 176


>sp|APGM_METST|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaera stadtmanae (strain ATCC

Query: 1 EPNDIKYKC 9
+P DI ++C
Sbjct: 88 KPGDIAFRC 96


>sp|APGM1_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanothermobacter thermautotrophicus

Query: 1 EPNDIKYKC 9
+P DI ++C
Sbjct: 88 KPGDIAFRC 96


>sp|APGM_METS3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanobrevibacter smithii (strain ATCC

Query: 2 PNDIKYKC 9
P DI ++C
Sbjct: 89 PGDIAFRC 96


>sp|APGM_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM

Query: 1 EPNDIKYKC 9
E ND+ ++C
Sbjct: 88 EVNDVAFRC 96


>sp|GLCD1_PICTO|GLUCOSE 1-dehydrogenase 1|Picrophilus torridus (strain ATCC 700027

Query: 1 EPNDIKYKC 9
EPNDI+ K
Sbjct: 207 EPNDIESKI 215


>sp|G3P_THESM|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus sibiricus (strain DSM 12597

Query: 1 EPNDIK 6
+PNDIK
Sbjct: 170 DPNDIK 175


>sp|G3P_PYRWO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus woesei

Query: 1 EPNDIK 6
+PNDIK
Sbjct: 170 DPNDIK 175


>sp|G3P_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EPNDIK 6
+PNDIK
Sbjct: 170 DPNDIK 175


>sp|G3P_PYRAB|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 EPNDIK 6
+PNDIK
Sbjct: 170 DPNDIK 175


>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EPNDIK 6
+PNDIK
Sbjct: 172 DPNDIK 177


>sp|G3P2_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EPNDIK 6
+PNDIK
Sbjct: 172 DPNDIK 177


>sp|G3P1_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EPNDIK 6
+PNDIK
Sbjct: 172 DPNDIK 177


>sp|G3P_METM5|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 EPNDIK 6
+PNDIK
Sbjct: 172 DPNDIK 177


>sp|G3P_METMP|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EPNDIK 6
+PNDIK
Sbjct: 172 DPNDIK 177


>sp|APGM_METMP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain DSM

Query: 1 EPNDIKYKC 9
+P DI ++C
Sbjct: 86 KPGDIAFRC 94


>sp|APGM_METM7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C7 /

Query: 1 EPNDIKYKC 9
+P DI ++C
Sbjct: 86 KPGDIAFRC 94


>sp|APGM_METVS|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC

Query: 1 EPNDIKYKC 9
+P DI ++C
Sbjct: 86 KPGDIAFRC 94


>sp|APGM_METM6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C6 /

Query: 1 EPNDIKYKC 9
+P DI ++C
Sbjct: 86 KPGDIAFRC 94


>sp|APGM_METM5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C5 /

Query: 1 EPNDIKYKC 9
+P DI ++C
Sbjct: 86 KPGDIAFRC 94


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EPNDIKYKC 9
E +IKYKC
Sbjct: 188 EGTNIKYKC 196


>sp|TFS_THECE|TRANSCRIPTION factor S|Thermococcus celer

Query: 1 EPNDIKYKC 9
EP+ I YKC
Sbjct: 91 EPSTIFYKC 99


>sp|TFS_THEKO|TRANSCRIPTION factor S|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EPNDIKYKC 9
EP+ I YKC
Sbjct: 91 EPSTIFYKC 99


>sp|GGR_METVS|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus vannielii (strain ATCC 35089

Query: 3 NDIKYKCC 10
ND+KYK
Sbjct: 336 NDLKYKTI 343




139|SequenceR|700|691|ILAKEEPNDI

>sp|PUR1_METJA|AMIDOPHOSPHORIBOSYLTRANSFERASE jannaschii (strain ATCC 43067

Query: 1 ILAKEEPND 9
ILAKE P D
Sbjct: 284 ILAKEHPVD 292


>sp|GLCD1_PICTO|GLUCOSE 1-dehydrogenase 1|Picrophilus torridus (strain ATCC 700027

Query: 4 KEEPNDI 10
K EPNDI
Sbjct: 205 KREPNDI 211


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 1 ILAKEEPNDI 10
I+AKE+P+ I
Sbjct: 77 IIAKEKPDGI 86


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 LAKEEPNDI 10
LAK +P DI
Sbjct: 600 LAKRDPEDI 608


>sp|SYS_METST|SERINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LAKEEPNDI 10
L +EEPN I
Sbjct: 6 LFREEPNKI 14


>sp|HEM1_METM6|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C6 /

Query: 1 ILAKEEPNDI 10
IL KE+ ND+
Sbjct: 231 ILKKEDLNDV 240




140|SequenceR|705|696|KLNDVILAKE

>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 1 KLNDVILAKE 10
+L DV+LA+E
Sbjct: 29 ELEDVVLARE 38


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 KLNDVILAKE 10
+L DV+LA+E
Sbjct: 29 ELEDVVLARE 38


>sp|GSA_METS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 NDVILAKE 10
N++ILAKE
Sbjct: 87 NEIILAKE 94


>sp|RRP4_KORCO|EXOSOME complex component Rrp4|Korarchaeum cryptofilum (strain OPF8)

Query: 1 KLNDVILAK 9
K+ DVILAK
Sbjct: 112 KIGDVILAK 120


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KLNDVILAKE 10
K DVIL+KE
Sbjct: 867 KPQDVILSKE 876


>sp|PDXT_SULTO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Sulfurisphaera tokodaii (strain

Query: 1 KLNDVIL 7
KLNDVI+
Sbjct: 162 KLNDVII 168


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 KLNDVILAKE 10
K D+IL+KE
Sbjct: 866 KPQDIILSKE 875


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 KLNDVILAKE 10
K D+IL+KE
Sbjct: 869 KPQDIILSKE 878




141|SequenceR|710|701|YFSEPKLNDV

>sp|FAU1_HALWD|PROBABLE ribonuclease FAU-1|Haloquadratum walsbyi (strain DSM 16790

Query: 3 SEPKLNDV 10
+EP LNDV
Sbjct: 128 TEPDLNDV 135


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 3 SEPKLNDV 10
S PK+NDV
Sbjct: 337 SSPKINDV 344


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YFSEPKLN 8
YF EPK +
Sbjct: 134 YFCEPKFD 141


>sp|FEN_METJA|FLAP endonuclease 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FSEPKLND 9
F EPK+ D
Sbjct: 265 FKEPKVTD 272


>sp|CRTD_HALJT|CAROTENOID 3,4-desaturase|Haloarcula japonica (strain ATCC 49778

Query: 1 YFSEPKLNDV 10
YF PKL +
Sbjct: 181 YFEHPKLQQI 190




142|SequenceR|715|706|TIFFEYFSEP

>sp|MCH_HALHT|MESACONYL-COA hydratase|Haloarcula hispanica (strain ATCC 33960

Query: 3 FFEYFSE 9
FFE+F+E
Sbjct: 33 FFEFFAE 39


>sp|RS6E_METMJ|SMALL ribosomal subunit protein eS6|Methanoculleus marisnigri (strain

Query: 5 EYFSEP 10
EYFS+P
Sbjct: 122 EYFSQP 127


>sp|MCH_HALMA|MESACONYL-COA hydratase|Haloarcula marismortui (strain ATCC 43049

Query: 3 FFEYFSE 9
FFE+F+E
Sbjct: 33 FFEFFAE 39


>sp|SYK_METMJ|LYSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 IFFEYFSE 9
+FFE+F E
Sbjct: 362 LFFEHFGE 369




143|SequenceR|720|711|ASTFPTIFFE

>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 2 STFPTIFFE 10
S++P FFE
Sbjct: 1005 SSYPRAFFE 1013


>sp|CDC63_SULAC|ORC1-TYPE DNA replication protein 3|Sulfolobus acidocaldarius (strain ATCC

Query: 1 ASTFPTIFFE 10
+S PTIFF+
Sbjct: 195 SSLGPTIFFK 204


>sp|SYD_PYRAE|ASPARTATE--TRNA(ASP) ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ASTFPTIFFE 10
A FP ++FE
Sbjct: 173 AELFPVMYFE 182


>sp|SYDND_AERPE|ASPARTATE--TRNA(ASP/ASN) ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ASTFPTIFFE 10
A FP ++F+
Sbjct: 175 AEVFPVVYFD 184


>sp|NADK_ARCFU|NAD kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 STFPTIFFE 10
S FP +FF+
Sbjct: 225 SEFPAVFFK 233


>sp|SYDND_METKA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 FPTIFFE 10
FP ++FE
Sbjct: 176 FPVVYFE 182


>sp|AGLR_HALVD|PROBABLE flippase AglR|Haloferax volcanii (strain ATCC 29605

Query: 2 STFPTI 7
STFPTI
Sbjct: 260 STFPTI 265




144|SequenceR|725|716|SPGEGASTFP

>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GEGASTFP 10
GEG TFP
Sbjct: 117 GEGEETFP 124


>sp|DGGGP_METS3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 GEGASTFP 10
EGA TFP
Sbjct: 187 AEGAKTFP 194


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 2 PGEGASTF 9
PG G STF
Sbjct: 293 PGSGKSTF 300


>sp|RS10_METJA|SMALL ribosomal subunit protein uS10|Methanocaldococcus jannaschii

Query: 1 SP-GEGASTF 9
SP GEG+STF
Sbjct: 52 SPDGEGSSTF 61


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 1 SPGEGASTF 9
SPG G +TF
Sbjct: 258 SPGMGKTTF 266


>sp|Y037_METJA|UNCHARACTERIZED protein MJ0037|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GEGASTFP 10
GEG + FP
Sbjct: 38 GEGGANFP 45


>sp|PSTK_METJA|L-SERYL-TRNA(SEC) kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGEGASTF 9
PG G STF
Sbjct: 9 PGVGKSTF 16


>sp|NTPTH_AERPE|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGEGASTF 9
PG G STF
Sbjct: 26 PGSGKSTF 33


>sp|RSMA_PYRIL|PROBABLE ribosomal RNA small subunit|Pyrobaculum islandicum (strain DSM

Query: 2 PGEGASTFP 10
PG GA T P
Sbjct: 35 PGRGALTLP 43


>sp|RS10_THEKO|SMALL ribosomal subunit protein uS10|Thermococcus kodakarensis (strain

Query: 1 SP-GEGASTF 9
SP GEG++TF
Sbjct: 52 SPDGEGSATF 61


>sp|RS10_PYRWO|SMALL ribosomal subunit protein uS10|Pyrococcus woesei

Query: 1 SP-GEGASTF 9
SP GEG++TF
Sbjct: 52 SPDGEGSATF 61


>sp|RS10_PYRHO|SMALL ribosomal subunit protein uS10|Pyrococcus horikoshii (strain ATCC

Query: 1 SP-GEGASTF 9
SP GEG++TF
Sbjct: 52 SPDGEGSATF 61


>sp|RS10_PYRFU|SMALL ribosomal subunit protein uS10|Pyrococcus furiosus (strain ATCC

Query: 1 SP-GEGASTF 9
SP GEG++TF
Sbjct: 52 SPDGEGSATF 61


>sp|RS10_PYRAB|SMALL ribosomal subunit protein uS10|Pyrococcus abyssi (strain GE5 /

Query: 1 SP-GEGASTF 9
SP GEG++TF
Sbjct: 52 SPDGEGSATF 61


>sp|KCY_AERPE|CYTIDYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGEGASTF 9
PG G ST+
Sbjct: 6 PGSGKSTY 13


>sp|RSMA_PYRAE|PROBABLE ribosomal RNA small subunit|Pyrobaculum aerophilum (strain ATCC

Query: 2 PGEGASTFP 10
PG GA T P
Sbjct: 35 PGAGALTIP 43


>sp|RS12_HALMO|SMALL ribosomal subunit protein uS12|Halococcus morrhuae (Micrococcus

Query: 2 PGEGASTF 9
PG+GA +F
Sbjct: 84 PGDGAISF 91


>sp|RS12_HALMA|SMALL ribosomal subunit protein uS12|Haloarcula marismortui (strain

Query: 2 PGEGASTF 9
PG+GA +F
Sbjct: 84 PGDGAISF 91


>sp|LYSJ_PYRAE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 PGEGASTF 9
PGE STF
Sbjct: 261 PGEHGSTF 268


>sp|RS12_NATPD|SMALL ribosomal subunit protein uS12|Natronomonas pharaonis (strain

Query: 2 PGEGASTF 9
PG+GA +F
Sbjct: 84 PGDGAISF 91




145|SequenceR|730|721|KTFTASPGEG

>sp|GLNK2_ARCFU|NITROGEN regulatory protein GlnK2|Archaeoglobus fulgidus (strain ATCC

Query: 3 FTASPGEG 10
FT SPG+G
Sbjct: 82 FTGSPGDG 89


>sp|GCSPA_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 KTFTASPG 8
KT+TA PG
Sbjct: 170 KTYTAGPG 177


>sp|MPTA_KORCO|GTP cyclohydrolase MptA|Korarchaeum cryptofilum (strain OPF8)

Query: 1 KTFTASPGEG 10
+T+T P EG
Sbjct: 200 RTYTKRPDEG 209




146|SequenceR|735|726|DPTTVKTFTA

>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PTTVKTFTA 10
PT VK FTA
Sbjct: 314 PTVVKAFTA 322


>sp|EF1A_ARCFU|ELONGATION factor 1-alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PTTVKTFTA 10
PT VK FTA
Sbjct: 312 PTVVKDFTA 320


>sp|EF1A_PICTO|ELONGATION factor 1-alpha|Picrophilus torridus (strain ATCC 700027

Query: 2 PTTVKTFTA 10
PT VK FTA
Sbjct: 314 PTVVKGFTA 322


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DPTTVKTF 8
DP TVK F
Sbjct: 216 DPETVKLF 223


>sp|SYR_METB6|ARGININE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 DPTTVKTF 8
DP TVK F
Sbjct: 219 DPETVKKF 226


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PTTVKTFTA 10
PT V+ FTA
Sbjct: 314 PTVVRAFTA 322


>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DPTTVKTFT 9
DPT + FT
Sbjct: 365 DPTPIMAFT 373


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DPTTVKTFT 9
DP T+K +T
Sbjct: 96 DPETMKVYT 104


>sp|RS4E_METMP|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 2 PTTVKTFT 9
P VKTFT
Sbjct: 22 PRKVKTFT 29




147|SequenceR|740|731|MSSHEDPTTV

>sp|SUMT_METBF|S-ADENOSYL-L-METHIONINE-DEPENDENT uroporphyrinogen III methyltransferase|Methanosarcina barkeri

Query: 1 MSSHEDPT 8
++ HEDPT
Sbjct: 146 ITGHEDPT 153


>sp|MPTA_METTH|GTP cyclohydrolase MptA|Methanothermobacter thermautotrophicus (strain

Query: 1 MSSHEDPTTV 10
MS+HE+P V
Sbjct: 247 MSAHENPMFV 256


>sp|SUMT_METIV|UROPORPHYRINOGEN-III C-methyltransferase|Methanobacterium ivanovii

Query: 1 MSSHEDPT 8
++ HEDPT
Sbjct: 140 VTGHEDPT 147


>sp|TSAC_METJA|PUTATIVE threonylcarbamoyl-AMP synthase|Methanocaldococcus jannaschii

Query: 1 MSSHEDPTTV 10
+S E PTTV
Sbjct: 146 ISGKESPTTV 155


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus (strain

Query: 1 MSSHEDPTTV 10
+S H+DP T+
Sbjct: 175 ISIHQDPRTL 184


>sp|Y2125_METS5|UPF0173 metal-dependent hydrolase Msed_2125|Metallosphaera sedula (strain

Query: 2 SSHEDPTTV 10
S H DPT +
Sbjct: 117 SEHSDPTGI 125


>sp|NFI_THEAC|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma acidophilum (strain

Query: 1 MSSHEDPTTV 10
+S +EDP T+
Sbjct: 55 LSINEDPDTI 64


>sp|SOR_PYRAB|SUPEROXIDE reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 MSSHEDPTT 9
+SH+DP T
Sbjct: 72 FTSHDDPLT 80


>sp|Y099_SACS2|UPF0173 metal-dependent hydrolase SSO0099|Saccharolobus solfataricus

Query: 2 SSHEDPT 8
S+H DPT
Sbjct: 118 STHSDPT 124




148|SequenceR|745|736|LIHILMSSHE

>sp|SPEE_ARCFU|POLYAMINE aminopropyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LIHILMSSHE 10
L+H+ M SHE
Sbjct: 62 LVHVPMLSHE 71


>sp|RNFB_METAC|ION-TRANSLOCATING oxidoreductase complex subunit B|Methanosarcina acetivorans (strain

Query: 2 IHILMSSHE 10
+H+L SH+
Sbjct: 196 VHVLCRSHD 204


>sp|RPO5_METS5|DNA-DIRECTED RNA polymerase subunit Rpo5|Metallosphaera sedula (strain ATCC

Query: 2 IHILMSSHE 10
+H+L+ HE
Sbjct: 12 VHVLVPKHE 20




149|SequenceR|750|741|FVMPLLIHIL

>sp|DCDB_METJA|DCTP deaminase, dUMP-forming|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VMPLLIHI 9
VMP LIH+
Sbjct: 191 VMPSLIHL 198


>sp|Y1859_ARCFU|UNCHARACTERIZED protein AF_1859|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 MPLLIHIL 10
+P LIHI+
Sbjct: 190 LPFLIHIV 197




150|SequenceR|755|746|ILLVCFVMPL

>sp|PURQ_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanothermobacter thermautotrophicus

Query: 3 LVCFVMP 9
LVC VMP
Sbjct: 185 LVCAVMP 191


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 ILLVCFVMPL 10
+L CFV+P+
Sbjct: 269 MLSACFVVPI 278


>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 2 LLVCFVMPL 10
L CFV+P+
Sbjct: 247 LSACFVLPV 255




151|SequenceR|760|751|YCMVMILLVC

***** No hits found ******


152|SequenceR|765|756|WQSKLYCMVM

>sp|GCH3_METVS|GTP cyclohydrolase III|Methanococcus vannielii (strain ATCC 35089

Query: 2 QSKLYC 7
QS+LYC
Sbjct: 31 QSRLYC 36


>sp|GCH3_METMP|GTP cyclohydrolase III|Methanococcus maripaludis (strain DSM 14266

Query: 2 QSKLYC 7
QS+LYC
Sbjct: 31 QSRLYC 36


>sp|GCH3_METM7|GTP cyclohydrolase III|Methanococcus maripaludis (strain C7 /

Query: 2 QSKLYC 7
QS+LYC
Sbjct: 31 QSRLYC 36


>sp|GCH3_METM6|GTP cyclohydrolase III|Methanococcus maripaludis (strain C6 /

Query: 2 QSKLYC 7
QS+LYC
Sbjct: 31 QSRLYC 36


>sp|GCH3_METM5|GTP cyclohydrolase III|Methanococcus maripaludis (strain C5 /

Query: 2 QSKLYC 7
QS+LYC
Sbjct: 31 QSRLYC 36


>sp|F16PA_METHJ|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 6 YCMVM 10
YCMVM
Sbjct: 105 YCMVM 109


>sp|GIN15_SACS2|DNA replication complex GINS protein|Saccharolobus solfataricus (strain

Query: 1 WQSKLYCMV 9
+ K+YC+V
Sbjct: 99 YNDKIYCIV 107




153|SequenceR|770|761|CTEKIWQSKL

>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 2 TEKIWQSKL 10
TE++WQ +L
Sbjct: 122 TERVWQPEL 130


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 2 TEKIWQSKL 10
TE++WQ +L
Sbjct: 123 TERVWQPEL 131


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 2 TEKIWQSKL 10
TE++WQ +L
Sbjct: 122 TERVWQPEL 130


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 2 TEKIWQSKL 10
TE++WQ +L
Sbjct: 122 TERVWQPEL 130


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 TEKIWQS 8
TE+IWQS
Sbjct: 693 TEEIWQS 699


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 TEKIWQS 8
TE+IWQS
Sbjct: 693 TEEIWQS 699


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 CTEKIW 6
CT+K+W
Sbjct: 536 CTKKVW 541


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 EKIWQS 8
EKIWQS
Sbjct: 497 EKIWQS 502


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 CTEKIW 6
CTE++W
Sbjct: 44 CTEQMW 49


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CTEKIWQ 7
C E IWQ
Sbjct: 472 CNEDIWQ 478


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EKIWQSKL 10
+KIW+SK+
Sbjct: 162 DKIWESKV 169


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 2 TEKIWQSKL 10
TE++W+ +L
Sbjct: 122 TERVWEPEL 130


>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 EKIWQSK 9
EK+W +K
Sbjct: 268 EKVWNAK 274




154|SequenceR|775|766|PIDPYCTEKI

>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 PIDPYCTEKI 10
PIDPY ++I
Sbjct: 1058 PIDPYLMQRI 1067


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 PIDPYCTEKI 10
PI+PY E+I
Sbjct: 1083 PINPYVVERI 1092


>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PIDPYCTEKI 10
PI PY TE++
Sbjct: 771 PIAPYLTEQM 780


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PIDPYCTEKI 10
P PY TE+I
Sbjct: 790 PFTPYITEEI 799


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PIDPYCTEKI 10
P PY TE+I
Sbjct: 790 PFTPYITEEI 799


>sp|AROB_PYRFU|3-DEHYDROQUINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PIDPYCT 7
P DPY T
Sbjct: 283 PFDPYTT 289


>sp|PURP_PYRNV|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum neutrophilum (strain DSM

Query: 4 PYCTEKI 10
PYC E I
Sbjct: 275 PYCLESI 281


>sp|PURP_PYRIL|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PYCTEKI 10
PYC E I
Sbjct: 264 PYCLESI 270


>sp|PURP_PYRCJ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum calidifontis (strain DSM

Query: 4 PYCTEKI 10
PYC E I
Sbjct: 264 PYCLESI 270


>sp|PURP_PYRAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum arsenaticum (strain DSM

Query: 4 PYCTEKI 10
PYC E I
Sbjct: 266 PYCLESI 272


>sp|CAS1B_METRM|CRISPR-ASSOCIATED protein Cas1 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 IDPYC 6
+DPYC
Sbjct: 220 LDPYC 224


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 2 IDPYCTEKI 10
IDPY E+I
Sbjct: 452 IDPYFIERI 460


>sp|PGK_SULAC|PHOSPHOGLYCERATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IDPYCTEKI 10
I PY EKI
Sbjct: 101 IGPYAVEKI 109


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PIDPYCTEK 9
PID +C+ K
Sbjct: 517 PIDAFCSPK 525


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PIDPYCT 7
P+D YC+
Sbjct: 508 PVDTYCS 514


>sp|Y855_METJA|UNCHARACTERIZED protein MJ0855|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DPYCT 7
DPYCT
Sbjct: 214 DPYCT 218


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PIDPYCTEKI 10
PID Y TE +
Sbjct: 134 PIDEYVTEDL 143


>sp|AATB_IGNH4|A-TYPE ATP synthase subunit B|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PIDPYCTE 8
PI+PY E
Sbjct: 121 PINPYARE 128


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PIDPYCTEK 9
PI+PY +K
Sbjct: 121 PINPYSRDK 129


>sp|AROA_METMJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoculleus marisnigri (strain ATCC

Query: 3 DPYCTEK 9
DP C EK
Sbjct: 401 DPECVEK 407


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 PYCTEK 9
PYC EK
Sbjct: 150 PYCGEK 155


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 1 PIDPYC 6
P+D YC
Sbjct: 502 PVDTYC 507


>sp|TIAS_CENSY|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Cenarchaeum symbiosum (strain

Query: 3 DPYCTE 8
+PYCT+
Sbjct: 362 NPYCTK 367


>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IDPYCTEKI 10
I PY EKI
Sbjct: 101 IGPYAREKI 109


>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PIDPYCT 7
P+D YC+
Sbjct: 511 PVDTYCS 517


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 1 PIDPYC 6
P+D YC
Sbjct: 506 PVDTYC 511


>sp|IF5A_PICTO|TRANSLATION initiation factor 5A|Picrophilus torridus (strain ATCC 700027

Query: 1 PIDPYCTEKI 10
P+DP EKI
Sbjct: 99 PVDPADLEKI 108


>sp|CARB1_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 2 IDPYCTEKI 10
IDP+ EK+
Sbjct: 454 IDPWFVEKV 462


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PIDPYC 6
P+D YC
Sbjct: 505 PVDTYC 510




155|SequenceR|780|771|SKYPDPIDPY

>sp|Y325_METJA|UNCHARACTERIZED protein MJ0325|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SKYPDPIDP 9
++YPD I+P
Sbjct: 46 TRYPDRINP 54


>sp|CCA_SULAC|CCA-ADDING enzyme|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PDPIDP 9
PDP+DP
Sbjct: 215 PDPVDP 220


>sp|LONB_ARCFU|ARCHAEAL Lon protease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YPDPIDP 9
YP+P DP
Sbjct: 82 YPNPQDP 88


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KYPDPIDPY 10
+YP IDPY
Sbjct: 249 EYPLSIDPY 257


>sp|RL1_HALMA|LARGE ribosomal subunit protein uL1|Haloarcula marismortui (strain ATCC

Query: 2 KYPDPIDP 9
K P+P+DP
Sbjct: 128 KMPEPLDP 135


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KYPDPIDPY 10
+YP IDPY
Sbjct: 249 EYPLSIDPY 257


>sp|HEM1_IGNH4|GLUTAMYL-TRNA reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 SKYPDPIDPY 10
+++PDP+ Y
Sbjct: 32 AQFPDPLAAY 41


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KYPDPIDPY 10
+YP IDPY
Sbjct: 250 EYPLSIDPY 258


>sp|PYRB_STAMF|ASPARTATE carbamoyltransferase catalytic subunit|Staphylothermus marinus

Query: 2 KYPDPID 8
+YPDPI+
Sbjct: 235 RYPDPIE 241


>sp|LIPA_AERPE|LIPOYL synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PDPIDP 9
P+P+DP
Sbjct: 72 PEPLDP 77


Query: 5 DPIDPY 10
DP++PY
Sbjct: 76 DPLEPY 81


>sp|PURA_PICTO|ADENYLOSUCCINATE synthetase|Picrophilus torridus (strain ATCC 700027

Query: 2 KYPDPIDP 9
++PD IDP
Sbjct: 343 RFPDKIDP 350


>sp|CIMA_SULAC|(R)-CITRAMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YPDPIDPY 10
+P+P PY
Sbjct: 285 HPNPYQPY 292


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SKYPDPIDPY 10
++ PDP PY
Sbjct: 486 ARVPDPHRPY 495


>sp|METK_METST|S-ADENOSYLMETHIONINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SKYPDPIDPY 10
SKY D +D Y
Sbjct: 222 SKYVDDVDAY 231


>sp|CAPPA_THEPD|PHOSPHOENOLPYRUVATE carboxylase|Thermofilum pendens (strain DSM 2475

Query: 4 PDPIDPY 10
P+P++PY
Sbjct: 434 PEPLEPY 440


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC

Query: 2 KYPDPIDP 9
KY +P DP
Sbjct: 32 KYDEPTDP 39


>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 1 SKYPDPIDPY 10
+K P+ +DPY
Sbjct: 500 AKLPELLDPY 509


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SKYPDPIDPY 10
+K+PDP++ +
Sbjct: 818 AKWPDPVEEW 827


>sp|CCA_SULTO|CCA-ADDING enzyme|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PDPIDP 9
PDP+DP
Sbjct: 215 PDPVDP 220


>sp|CCA_SACSH|CCA-ADDING enzyme|Saccharolobus shibatae (strain ATCC 51178

Query: 4 PDPIDP 9
PDP+DP
Sbjct: 214 PDPVDP 219


>sp|CCA_SACS2|CCA-ADDING enzyme|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PDPIDP 9
PDP+DP
Sbjct: 214 PDPVDP 219


>sp|CCA_SACI7|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 PDPIDP 9
PDP+DP
Sbjct: 214 PDPVDP 219


>sp|CCA_SACI6|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 4 PDPIDP 9
PDP+DP
Sbjct: 214 PDPVDP 219


>sp|CCA_SACI4|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.14.25 /

Query: 4 PDPIDP 9
PDP+DP
Sbjct: 214 PDPVDP 219


>sp|CCA_SACI3|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 PDPIDP 9
PDP+DP
Sbjct: 214 PDPVDP 219


>sp|CCA_SACI2|CCA-ADDING enzyme|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 PDPIDP 9
PDP+DP
Sbjct: 214 PDPVDP 219


>sp|CCA_SACI1|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 PDPIDP 9
PDP+DP
Sbjct: 214 PDPVDP 219


>sp|SYDND_METTH|ASPARTATE--TRNA(ASP/ASN) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SKYPDPIDP 9
SK P P+DP
Sbjct: 106 SKQPLPLDP 114


>sp|Y2022_ARCFU|UNCHARACTERIZED protein AF_2022|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KYPDPIDPY 10
K P PI PY
Sbjct: 89 KEPTPISPY 97


>sp|PYRB_CALMQ|ASPARTATE carbamoyltransferase catalytic subunit|Caldivirga maquilingensis

Query: 2 KYPDPID 8
++PDP++
Sbjct: 232 RFPDPVE 238


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 SKYPDPID 8
+K+P+P+D
Sbjct: 818 AKWPEPVD 825


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 4 PDPIDP 9
PDP+DP
Sbjct: 244 PDPVDP 249


>sp|HIS8_METMP|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KYPDPIDP 9
+YP PI+P
Sbjct: 66 QYPQPINP 73


>sp|HIS8_METM5|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C5 /

Query: 2 KYPDPIDP 9
+YP PI+P
Sbjct: 66 QYPQPINP 73


>sp|HELS_THEVO|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SKYPDPIDPY 10
S+ P+P+D Y
Sbjct: 389 SEEPEPVDSY 398


>sp|HIS8_METM6|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C6 /

Query: 2 KYPDPIDP 9
+YP PI+P
Sbjct: 66 QYPQPINP 73


>sp|Y1542_METKA|UPF0173 metal-dependent hydrolase MK1542|Methanopyrus kandleri (strain

Query: 1 SKYPDPIDP 9
+K PD +DP
Sbjct: 33 AKSPDEVDP 41


>sp|HIS8_META3|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 KYPDPIDP 9
+YP+P++P
Sbjct: 66 QYPEPVNP 73


>sp|HIS8_METM7|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C7 /

Query: 2 KYPDPIDP 9
+YP PI+P
Sbjct: 66 QYPQPINP 73


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KYPDPIDP 9
+YP+P++P
Sbjct: 69 QYPEPVNP 76


>sp|CDC6M_HALMA|ORC1-TYPE DNA replication protein 13|Haloarcula marismortui (strain ATCC

Query: 4 PDPIDPY 10
PDPI Y
Sbjct: 111 PDPISTY 117


>sp|SYS_HALWD|SERINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 PDPIDPY 10
P+P+ PY
Sbjct: 430 PEPLQPY 436


>sp|Y1251_PYRAB|RUTC family protein PYRAB12510|Pyrococcus abyssi (strain GE5 /

Query: 1 SKYPDPIDPY 10
K P PI PY
Sbjct: 9 EKAPKPIGPY 18


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SKYPDPID 8
S+YPD +D
Sbjct: 287 SQYPDVVD 294


>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 YPDPIDPY 10
Y DP +PY
Sbjct: 59 YADPNNPY 66


>sp|CHEB_THEKO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Thermococcus

Query: 1 SKYPDPI 7
SKYP P+
Sbjct: 76 SKYPTPV 82


>sp|RL4_SACS2|LARGE ribosomal subunit protein uL4|Saccharolobus solfataricus (strain

Query: 2 KYPDPIDP 9
KY +PI P
Sbjct: 196 KYKEPIGP 203


>sp|Y3206_SACS2|RUTC family protein SSO3206|Saccharolobus solfataricus (strain ATCC

Query: 1 SKYPDPIDPY 10
K P PI PY
Sbjct: 8 EKAPKPIGPY 17




156|SequenceR|785|776|LSLISSKYPD

>sp|RNZ_PYRNV|RIBONUCLEASE Z|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LSLISSKYPD 10
L+ +SS+YPD
Sbjct: 248 LTHVSSRYPD 257


>sp|DNLI_NITMS|DNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LSLISSKYPD 10
L ISS YPD
Sbjct: 274 LENISSYYPD 283


>sp|PELO_METJA|PROTEIN pelota homolog|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SLISSKYPD 10
+ ISS+YP+
Sbjct: 210 NFISSQYPE 218




157|SequenceR|790|781|EKFKILSLIS

>sp|Y215_NITMS|MEMO1 family protein Nmar_0215|Nitrosopumilus maritimus (strain SCM1)

Query: 1 EKFKILSLI 9
EKFKIL +I
Sbjct: 147 EKFKILPII 155




158|SequenceR|795|786|ILHPNEKFKI

>sp|FLAB2_ARCFU|PROBABLE flagellin 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILHPNEKFKI 10
++ PNEK+KI
Sbjct: 149 VVEPNEKYKI 158


>sp|DAPAL_THEAC|UNCHARACTERIZED DapA-like lyase Ta1157|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ILHPNEKFKI 10
I H NEKF I
Sbjct: 174 IRHKNEKFDI 183


>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ILHPNEKF 8
I HPN +F
Sbjct: 370 IAHPNSRF 377


>sp|Y2791_METMA|UPF0758 protein MM_2791|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ILHPNEKFK 9
I+HP E FK
Sbjct: 155 IVHPREVFK 163


>sp|Y382_METBU|UPF0758 protein Mbur_0382|Methanococcoides burtonii (strain DSM 6242

Query: 1 ILHPNEKFK 9
I+HP E FK
Sbjct: 155 IVHPREVFK 163


>sp|Y1979_METAC|UPF0758 protein MA_1979|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ILHPNEKFK 9
I+HP E FK
Sbjct: 155 IVHPREVFK 163


>sp|Y2303_METBF|UPF0758 protein Mbar_A2303|Methanosarcina barkeri (strain Fusaro /

Query: 1 ILHPNEKFK 9
I+HP E FK
Sbjct: 155 IVHPREVFK 163


>sp|Y988_METJA|UNCHARACTERIZED protein MJ0988|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LHPNEKFKI 10
L+PN KF+I
Sbjct: 38 LNPNGKFRI 46


>sp|DNAG_PYRFU|DNA primase DnaG|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LHPNEKF 8
+HPNEK
Sbjct: 339 VHPNEKI 345


>sp|TOP3_SACS2|DNA topoisomerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PNEKFKI 10
PN KFKI
Sbjct: 385 PNSKFKI 391


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 2 LHPNEKF 8
+HP +KF
Sbjct: 293 IHPKDKF 299


>sp|DCDB_METS3|DCTP deaminase, dUMP-forming|Methanobrevibacter smithii (strain ATCC

Query: 1 ILHPNE 6
I+HPNE
Sbjct: 77 IIHPNE 82


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HPNEKFKI 10
HP ++FK+
Sbjct: 451 HPEKRFKV 458


>sp|RLME_META3|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus aeolicus

Query: 1 ILHPNEKFKI 10
+L NEKF+I
Sbjct: 34 LLQLNEKFEI 43


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 3 HPNEKF 8
HPNEK
Sbjct: 576 HPNEKI 581




159|SequenceR|800|791|SVNMIILHPN

>sp|PYRB_PYRAE|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum aerophilum

Query: 3 NMIILHP 9
N+IILHP
Sbjct: 258 NLIILHP 264


>sp|PYRB_PYRIL|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum islandicum

Query: 3 NMIILHP 9
N+IILHP
Sbjct: 258 NLIILHP 264


>sp|NUCS_METTH|ENDONUCLEASE NucS|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 NMIILHPN 10
+MII+HP+
Sbjct: 138 DMIIMHPH 145


>sp|G3P1_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VNMIILHP 9
+N I+LHP
Sbjct: 181 INAIVLHP 188


>sp|PYRB_METVS|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus vannielii

Query: 3 NMIILHP 9
N+II+HP
Sbjct: 253 NLIIMHP 259


>sp|PYRB_ARCFU|ASPARTATE carbamoyltransferase catalytic subunit|Archaeoglobus fulgidus

Query: 3 NMIILHP 9
+MI++HP
Sbjct: 254 SMIVMHP 260


>sp|PYRB_METLZ|ASPARTATE carbamoyltransferase catalytic subunit|Methanocorpusculum labreanum

Query: 4 MIILHP 9
MI+LHP
Sbjct: 259 MIVLHP 264


>sp|PYRB_PYRNV|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum neutrophilum

Query: 3 NMIILHP 9
++IILHP
Sbjct: 258 HLIILHP 264


>sp|PYRB_METPE|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaerula palustris

Query: 3 NMIILHP 9
+M++LHP
Sbjct: 253 HMVVLHP 259


>sp|NPD_CALMQ|NAD-DEPENDENT protein deacetylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 SVNMIILHPN 10
S+N+I LH N
Sbjct: 116 SINVIELHGN 125


>sp|LADH_METM7|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 3 NMIILHPN 10
N +ILHP+
Sbjct: 158 NSVILHPS 165




160|SequenceR|805|796|DPICDSVNMI

>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC

Query: 2 PICDSVNMI 10
P+CDS N+I
Sbjct: 39 PMCDSKNII 47


>sp|CMR6_SACS2|CRISPR system CMR subunit Cmr6|Saccharolobus solfataricus (strain ATCC

Query: 2 PICDSVNMI 10
PICDS+ ++
Sbjct: 251 PICDSLPLV 259


>sp|TF2B_METM7|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C7 /

Query: 2 PICDSVNMI 10
P+C S N+I
Sbjct: 44 PVCGSKNII 52


>sp|TF2B_METM6|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C6 /

Query: 2 PICDSVNMI 10
P+C S N+I
Sbjct: 44 PVCGSKNII 52


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DPICDSVNMI 10
D + D+VNM+
Sbjct: 262 DELSDAVNMV 271




161|SequenceR|810|801|VVEIADPICD

>sp|SYFB_PYRHO|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VVEIADPI 8
+VEIA+PI
Sbjct: 408 IVEIANPI 415


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 EIADPIC 9
EI DP+C
Sbjct: 168 EIRDPVC 174


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVEIADPI 8
+VEIA+PI
Sbjct: 409 IVEIANPI 416


>sp|MTAP_SACS2|S-METHYL-5'-THIOADENOSINE phosphorylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VEIADPICD 10
V +ADP C+
Sbjct: 131 VSMADPFCN 139


>sp|SYFB_PYRAB|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 VVEIADPI 8
+VEIA+P+
Sbjct: 408 IVEIANPV 415


>sp|MTAP_HYPBU|S-METHYL-5'-THIOADENOSINE phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 2 VEIADPICD 10
V +ADP C+
Sbjct: 135 VSMADPFCE 143


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 EIADPIC 9
EI DP+C
Sbjct: 168 EIKDPVC 174


>sp|MTAP_AERPE|S-METHYL-5'-THIOADENOSINE phosphorylase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VEIADPICD 10
V +ADP C+
Sbjct: 136 VSMADPFCE 144


>sp|ABLA_METMA|L-LYSINE 2,3-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 EIADPICD 10
E+ DP+C+
Sbjct: 92 ELEDPLCE 99


>sp|MTAP_THEKO|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VEIADPIC 9
V +ADP C
Sbjct: 123 VSMADPFC 130


>sp|MTAP_THEPD|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 2 VEIADPIC 9
V +ADP C
Sbjct: 127 VSMADPFC 134


>sp|PSA_ARCFU|PROTEASOME subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VVEIADPICD 10
V E+A ICD
Sbjct: 109 VKELAKKICD 118


>sp|MTAP_PYRHO|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VEIADPIC 9
V +ADP C
Sbjct: 123 VSMADPFC 130


>sp|MTAP_NITMS|S-METHYL-5'-THIOADENOSINE phosphorylase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 VEIADPIC 9
+ +ADP C
Sbjct: 128 ISVADPFC 135


>sp|MTAP_PYRAB|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 2 VEIADPIC 9
V +ADP C
Sbjct: 123 VSMADPFC 130


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 1 VVEIADPICD 10
VVEI++P+ +
Sbjct: 405 VVEISNPVSE 414


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 1 VVEIADPI 8
V+EI DPI
Sbjct: 240 VIEIEDPI 247




162|SequenceR|815|806|GEPKSVVEIA

>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro

Query: 1 GEPKSVVEI 9
G+PK VVEI
Sbjct: 36 GDPKPVVEI 44


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 GEPKSVVEI 9
G+P+ VVEI
Sbjct: 36 GDPRPVVEI 44


>sp|DNAG_NANEQ|DNA primase DnaG|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 PKSVVEIA 10
PKSVVE++
Sbjct: 204 PKSVVELS 211


>sp|IF5A_SULTO|TRANSLATION initiation factor 5A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GEPKSVVEIA 10
GEP VVEI+
Sbjct: 21 GEPCRVVEIS 30


>sp|RIFK_SULTO|RIBOFLAVIN kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EPKSVVEI 9
PKSV+EI
Sbjct: 105 HPKSVIEI 112


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EPKSVVEIA 10
EPK V+E+A
Sbjct: 515 EPKIVIEVA 523


>sp|RIFK_SACS2|RIBOFLAVIN kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EPKSVVEI 9
PKSV+EI
Sbjct: 144 HPKSVIEI 151


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain

Query: 1 GEPKSVVEI 9
G+PK VEI
Sbjct: 36 GDPKPTVEI 44


>sp|PDXT_HALLT|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Halorubrum lacusprofundi

Query: 1 GEPKSVVEI 9
GEP VVE+
Sbjct: 27 GEPAEVVEV 35


>sp|NADM_METBF|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PKSVVEI 9
PKSVVE+
Sbjct: 145 PKSVVEV 151


>sp|GCH3_PYRCJ|GTP cyclohydrolase III|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 EPKSVVEIA 10
EPK+ EIA
Sbjct: 170 EPKAAYEIA 178


>sp|DGGGP_PYRHO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EPKSVVEI 9
EPK+ VEI
Sbjct: 2 EPKAFVEI 9


>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 EPKSVVEIA 10
EPK V+E+A
Sbjct: 497 EPKIVLEVA 505


>sp|IF5A_SULAC|TRANSLATION initiation factor 5A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GEPKSVVEIA 10
GEP VVEI
Sbjct: 21 GEPCRVVEIT 30


>sp|RIFK_SULAC|RIBOFLAVIN kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PKSVVEI 9
PKSVVE+
Sbjct: 129 PKSVVEL 135


>sp|IF5A_PYRAE|TRANSLATION initiation factor 5A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GEPKSVVEI 9
GEP VVEI
Sbjct: 27 GEPCRVVEI 35


>sp|IF5A_PYRCJ|TRANSLATION initiation factor 5A|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GEPKSVVEI 9
GEP VVEI
Sbjct: 21 GEPCRVVEI 29


>sp|IF5A_PYRAR|TRANSLATION initiation factor 5A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GEPKSVVEI 9
GEP VVEI
Sbjct: 21 GEPCRVVEI 29


>sp|IF5A_PYRNV|TRANSLATION initiation factor 5A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GEPKSVVEI 9
GEP VVEI
Sbjct: 21 GEPCRVVEI 29


>sp|CISY_PYRFU|CITRATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GEPKSVVEI 9
G PK V+EI
Sbjct: 77 GLPKEVIEI 85


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GEPKSVVEIA 10
G PK+V+E++
Sbjct: 203 GIPKTVIELS 212


>sp|RIFK_METS5|RIBOFLAVIN kinase|Metallosphaera sedula (strain ATCC 51363

Query: 3 PKSVVEI 9
PKSV+E+
Sbjct: 187 PKSVIEV 193


>sp|IF5A_PYRIL|TRANSLATION initiation factor 5A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GEPKSVVEI 9
GEP VVEI
Sbjct: 21 GEPCRVVEI 29


>sp|RSMA_HALMA|PROBABLE ribosomal RNA small subunit|Haloarcula marismortui (strain ATCC

Query: 1 GEPKSVVEIA 10
G+P +VVE A
Sbjct: 244 GDPDAVVEAA 253


>sp|HIS6_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 1 GEPKSVVEI 9
G PK +VE+
Sbjct: 225 GHPKHMVEV 233


>sp|DNAG_METB6|DNA primase DnaG|Methanoregula boonei (strain DSM 21154

Query: 3 PKSVVEIA 10
PKS+VE+
Sbjct: 202 PKSIVELT 209


>sp|TF2B7_HALSA|TRANSCRIPTION initiation factor IIB 7|Halobacterium salinarum (strain ATCC 700922

Query: 1 GEPKSVVEIA 10
G P+SV E+A
Sbjct: 152 GVPRSVREVA 161


>sp|DHQS_METJA|3-DEHYDROQUINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GEPKSVVEI 9
GEP SVV++
Sbjct: 325 GEPISVVDL 333




163|SequenceR|820|811|FQIKTGEPKS

>sp|ENO_PYRFU|ENOLASE furiosus (strain ATCC 43587

Query: 2 QIKTGEP 8
QIKTG P
Sbjct: 389 QIKTGAP 395


>sp|ENO_PYRHO|ENOLASE horikoshii (strain ATCC 700860

Query: 2 QIKTGEP 8
QIKTG P
Sbjct: 387 QIKTGAP 393


>sp|ENO_PYRAB|ENOLASE abyssi (strain GE5 /

Query: 2 QIKTGEP 8
QIKTG P
Sbjct: 387 QIKTGAP 393


>sp|ENO_META3|ENOLASE aeolicus (strain ATCC BAA-1280

Query: 2 QIKTGEP 8
QIKTG P
Sbjct: 386 QIKTGAP 392


>sp|ENO_METKA|ENOLASE kandleri (strain AV19 /

Query: 2 QIKTGEP 8
QIKTG P
Sbjct: 387 QIKTGAP 393


>sp|ENO_METJA|ENOLASE jannaschii (strain ATCC 43067

Query: 2 QIKTGEP 8
QIKTG P
Sbjct: 384 QIKTGAP 390


>sp|ENO_METM7|ENOLASE maripaludis (strain C7 /

Query: 2 QIKTGEP 8
QIKTG P
Sbjct: 387 QIKTGAP 393


>sp|ENO_METVS|ENOLASE vannielii (strain ATCC 35089

Query: 2 QIKTGEP 8
QIKTG P
Sbjct: 387 QIKTGAP 393


>sp|ENO_THEKO|ENOLASE kodakarensis (strain ATCC BAA-918

Query: 2 QIKTGEP 8
QIKTG P
Sbjct: 389 QIKTGAP 395


>sp|ENO1_METHJ|ENOLASE 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 QIKTGEP 8
QIKTG P
Sbjct: 385 QIKTGAP 391


>sp|ENO_THEON|ENOLASE onnurineus (strain NA1)

Query: 2 QIKTGEP 8
QIKTG P
Sbjct: 389 QIKTGAP 395


>sp|ENO_THEGJ|ENOLASE gammatolerans (strain DSM 15229

Query: 2 QIKTGEP 8
QIKTG P
Sbjct: 389 QIKTGAP 395


>sp|ENO_METM5|ENOLASE maripaludis (strain C5 /

Query: 2 QIKTGEP 8
QIKTG P
Sbjct: 387 QIKTGAP 393


>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 4 KTGEPK 9
KTGEPK
Sbjct: 674 KTGEPK 679


>sp|ENO_METMP|ENOLASE maripaludis (strain DSM 14266

Query: 2 QIKTGEP 8
QIKTG P
Sbjct: 387 QIKTGAP 393


>sp|IF2G_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter thermautotrophicus

Query: 3 IKTGEP 8
IKTGEP
Sbjct: 346 IKTGEP 351


>sp|LIPA_PYRCJ|LIPOYL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 IKTGEPK 9
+KTG+P+
Sbjct: 68 VKTGDPR 74


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 FQIKTGEPKS 10
+ I TG+PK+
Sbjct: 107 YYIGTGDPKN 116


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 FQIKTGEPKS 10
+ I TG+PK+
Sbjct: 103 YYIGTGDPKN 112


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 3 IKTGEPKS 10
+KTGEP +
Sbjct: 465 LKTGEPHT 472


>sp|CBID_METJA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FQIKTGEP 8
Q+K GEP
Sbjct: 112 LQVKKGEP 119


>sp|HEM1_METKA|GLUTAMYL-TRNA reductase|Methanopyrus kandleri (strain AV19 /

Query: 2 QIKTGEPKS 10
++KTG+P++
Sbjct: 352 RLKTGDPEN 360


>sp|Y035_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 IKTGEPK 9
IK+G+PK
Sbjct: 223 IKSGDPK 229


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 3 IKTGEPKS 10
I TG+PKS
Sbjct: 614 IMTGKPKS 621


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 3 IKTGEPKS 10
I TG+PKS
Sbjct: 616 IMTGKPKS 623


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 3 IKTGEPKS 10
I TG+PKS
Sbjct: 614 IMTGKPKS 621




164|SequenceR|825|816|KRTGLFQIKT

***** No hits found ******


165|SequenceR|830|821|TETLSKRTGL

>sp|TFE_NANEQ|TRANSCRIPTION factor E|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 TETLSKRTG 9
TE+LSK+TG
Sbjct: 38 TESLSKKTG 46


>sp|RSMA_THEON|PROBABLE ribosomal RNA small subunit|Thermococcus onnurineus (strain NA1)

Query: 1 TETLSKRTG 9
T+ LSKR G
Sbjct: 57 TDALSKRAG 65


>sp|GCSPB_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 TETLSKRT 8
TET SKRT
Sbjct: 418 TETESKRT 425


>sp|RSMA_PYRFU|PROBABLE ribosomal RNA small subunit|Pyrococcus furiosus (strain ATCC

Query: 1 TETLSKRTG 9
T+ LSKR G
Sbjct: 57 TDELSKRAG 65


>sp|ASPD_METJA|L-ASPARTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ETLSKRTG 9
+TLS+RTG
Sbjct: 42 KTLSERTG 49


>sp|RSMA_THEKO|PROBABLE ribosomal RNA small subunit|Thermococcus kodakarensis (strain

Query: 1 TETLSKRTG 9
T+ LSKR G
Sbjct: 57 TDPLSKRAG 65


>sp|SYH_METVS|HISTIDINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 ETLSKRTG 9
E LSK+TG
Sbjct: 47 ELLSKKTG 54


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 ETLSKRTG 9
+TLS+RTG
Sbjct: 153 KTLSERTG 160


>sp|SYH_META3|HISTIDINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 ETLSKRTG 9
E LSK+TG
Sbjct: 47 ELLSKKTG 54


>sp|PDXT_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum aerophilum (strain

Query: 4 LSKRTGL 10
L+KRTGL
Sbjct: 60 LAKRTGL 66


>sp|UREG_SULTO|UREASE accessory protein UreG|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ETLSKRTGL 10
ETL KRT L
Sbjct: 90 ETLMKRTSL 98


>sp|SYH_METM7|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 ETLSKRTG 9
E LSK+TG
Sbjct: 49 ELLSKKTG 56


>sp|PDXT_PYRIL|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum islandicum (strain

Query: 4 LSKRTGL 10
L+KRTGL
Sbjct: 60 LAKRTGL 66


>sp|SYH_METMP|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ETLSKRTG 9
E LSK+TG
Sbjct: 47 ELLSKKTG 54




166|SequenceR|835|826|PKTLETETLS

>sp|Y1565_METJA|PROBABLE helicase MJ1565|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKTLETETLS 10
PKTL+ ETLS
Sbjct: 402 PKTLDAETLS 411


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 1 PKTLETETL 9
P T+E ETL
Sbjct: 405 PLTIEKETL 413


>sp|MPTN_METJA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKTLETETLS 10
PKT+ TE+++
Sbjct: 112 PKTVVTESIN 121


>sp|CCA_HALMA|CCA-ADDING enzyme|Haloarcula marismortui (strain ATCC 43049

Query: 1 PKTLETET 8
P+TL+TE+
Sbjct: 339 PETLDTES 346




167|SequenceR|840|831|LYLYNPKTLE

>sp|KPRS_PYRAB|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus abyssi (strain GE5 /

Query: 3 LYNPKTLE 10
++NPKTLE
Sbjct: 123 IHNPKTLE 130


>sp|Y1032_METJA|UNCHARACTERIZED protein MJ1032|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LYLYNP 6
LYLYNP
Sbjct: 101 LYLYNP 106


>sp|KPRS_PYRFU|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LYNPKTLE 10
++NPKTLE
Sbjct: 120 IHNPKTLE 127


>sp|G1PDH_THESM|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus sibiricus (strain DSM 12597

Query: 1 LYLYNPKTLE 10
L LY PKT E
Sbjct: 38 LILYGPKTKE 47


>sp|MTXX_METAC|PUTATIVE methyltransferase mtx subunit X|Methanosarcina acetivorans

Query: 5 NPKTLE 10
NPKTLE
Sbjct: 27 NPKTLE 32


>sp|HEM11_PYRAR|GLUTAMYL-TRNA reductase 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 YLYNP 6
YLYNP
Sbjct: 52 YLYNP 56


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 YNPKTLE 10
Y PKTLE
Sbjct: 7 YRPKTLE 13


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 YNPKTLE 10
YNPK +E
Sbjct: 9 YNPKNVE 15


>sp|KPRS_PYRHO|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LYNPKTLE 10
++NPKTL+
Sbjct: 123 IHNPKTLD 130


>sp|RL32_METKA|LARGE ribosomal subunit protein eL32|Methanopyrus kandleri (strain AV19

Query: 3 LYNPKTLE 10
+YNPK LE
Sbjct: 87 VYNPKDLE 94


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 4 YNPKTLE 10
Y P+TLE
Sbjct: 16 YRPRTLE 22


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LYLYNPKT 8
+Y++NP T
Sbjct: 293 IYIFNPDT 300


>sp|TKSP_THEKO|SUBTILISIN-LIKE serine protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LYLYNP 6
LYLY+P
Sbjct: 486 LYLYDP 491


Query: 1 LYLYNP 6
LYLY+P
Sbjct: 607 LYLYDP 612


>sp|Y1649_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 3 LYNPKTL 9
LYNPK++
Sbjct: 56 LYNPKSV 62


>sp|R15PI_ARCFU|RIBOSE 1,5-bisphosphate isomerase|Archaeoglobus fulgidus (strain ATCC

Query: 2 YLYNPKTL 9
Y ++PKTL
Sbjct: 225 YKFSPKTL 232


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 4 YNPKTLE 10
Y PKTL+
Sbjct: 17 YRPKTLD 23


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 4 YNPKT 8
YNPKT
Sbjct: 472 YNPKT 476


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 YNPKT 8
YNPKT
Sbjct: 472 YNPKT 476


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 YNPKT 8
YNPKT
Sbjct: 472 YNPKT 476


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 YNPKT 8
YNPKT
Sbjct: 472 YNPKT 476


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 YNPKT 8
YNPKT
Sbjct: 472 YNPKT 476


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 YNPKT 8
YNPKT
Sbjct: 472 YNPKT 476


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 YNPKT 8
YNPKT
Sbjct: 472 YNPKT 476


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 YNPKT 8
YNPKT
Sbjct: 472 YNPKT 476


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YLYNPK 7
Y YNPK
Sbjct: 267 YRYNPK 272


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LYLYNP 6
L+LYNP
Sbjct: 657 LFLYNP 662


>sp|VOLA_HALVD|VOLACTIN volcanii (strain ATCC 29605

Query: 3 LYNPKTLE 10
LY+ KTLE
Sbjct: 130 LYHDKTLE 137


>sp|BPL_METJA|PUTATIVE biotin ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LYNPKTL 9
LYNPK +
Sbjct: 62 LYNPKVI 68


>sp|MSRA_METM6|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 3 LYNPKTLE 10
+YNPK L+
Sbjct: 61 IYNPKILK 68


>sp|RNZ_THESM|RIBONUCLEASE Z|Thermococcus sibiricus (strain DSM 12597

Query: 1 LYLYNPK 7
LY+Y PK
Sbjct: 86 LYIYGPK 92


>sp|RFCL_METS3|REPLICATION factor C large subunit|Methanobrevibacter smithii (strain ATCC

Query: 4 YNPKTLE 10
Y PKTL+
Sbjct: 7 YRPKTLD 13


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 LYLYNPKTLE 10
+YLY+P+ E
Sbjct: 93 IYLYDPEKQE 102




168|SequenceR|845|836|KETPLLYLYN

>sp|PURQ_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ETPLLYLY 9
ETP YLY
Sbjct: 122 ETPFTYLY 129


>sp|Y3021_SACS2|UNCHARACTERIZED protein SSO3021|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 TPLLYLYN 10
TP+LY YN
Sbjct: 456 TPILYAYN 463


>sp|COBQ_METVS|PROBABLE cobyric acid synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KETPLLYLYN 10
KETPL+ L N
Sbjct: 400 KETPLITLSN 409


>sp|RPO1C_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrobaculum aerophilum (strain ATCC

Query: 3 TPLLYLY 9
TPL+Y+Y
Sbjct: 106 TPLMYVY 112


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KETPLLYLYN 10
+E+P +Y+Y+
Sbjct: 448 QESPYVYVYD 457


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 3 TPLLYLYN 10
TPL+YL N
Sbjct: 40 TPLVYLDN 47


>sp|DGGGP_METST|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 TPLLYLYN 10
+PLLY YN
Sbjct: 209 SPLLYYYN 216


>sp|RPO3_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo3|Aeropyrum pernix (strain ATCC 700893

Query: 2 ETPLLYL 8
ETPL+Y+
Sbjct: 136 ETPLIYV 142


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 ETPLLYLYN 10
ETPL+Y N
Sbjct: 267 ETPLMYDMN 275


>sp|Y1345_METJA|TPR repeat-containing protein MJ1345|Methanocaldococcus jannaschii

Query: 2 ETPLLYLY 9
+ PLLYLY
Sbjct: 247 DDPLLYLY 254


>sp|SYT_METMA|THREONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ETPLLYLYN 10
ETPL+Y N
Sbjct: 266 ETPLMYDMN 274


>sp|Y1032_METJA|UNCHARACTERIZED protein MJ1032|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 LLYLYN 10
LLYLYN
Sbjct: 100 LLYLYN 105


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ETPLLYLYN 10
ETPL+Y N
Sbjct: 267 ETPLMYDMN 275




169|SequenceR|850|841|PGSHNKETPL

>sp|RS4E_ARCFU|SMALL ribosomal subunit protein eS4|Archaeoglobus fulgidus (strain ATCC

Query: 1 PGSHNKE 7
PG HNKE
Sbjct: 30 PGPHNKE 36


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 4 HNKETPL 10
HNKE PL
Sbjct: 197 HNKENPL 203


>sp|RS4E_PICTO|SMALL ribosomal subunit protein eS4|Picrophilus torridus (strain ATCC

Query: 1 PGSHNKETPL 10
PGSH K++ +
Sbjct: 29 PGSHKKDSSI 38


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HNKETPL 10
HN+E PL
Sbjct: 197 HNEENPL 203


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 2 GSHNKETP 9
GSHN E P
Sbjct: 289 GSHNPEAP 296


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 SHNKETP 9
S NKETP
Sbjct: 1691 SRNKETP 1697


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 4 HNKETPL 10
H+KE PL
Sbjct: 197 HDKENPL 203


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 4 HNKETPL 10
H+KE PL
Sbjct: 197 HDKENPL 203


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 4 HNKETPL 10
H+KE PL
Sbjct: 197 HDKENPL 203


>sp|RS11_METKA|SMALL ribosomal subunit protein uS11|Methanopyrus kandleri (strain AV19

Query: 1 PGSHNKETP 9
PG H +TP
Sbjct: 86 PGGHGPKTP 94


>sp|RS4E_NANEQ|SMALL ribosomal subunit protein eS4|Nanoarchaeum equitans (strain

Query: 1 PGSHNKE 7
PG H+KE
Sbjct: 34 PGPHSKE 40




170|SequenceR|855|846|CICPGPGSHN

>sp|ILVD_METKA|DIHYDROXY-ACID dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 3 CPGPGS 8
CPGPGS
Sbjct: 185 CPGPGS 190


>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 CICPGPGS 8
C CPGP S
Sbjct: 183 CACPGPRS 190


>sp|ILVD_METM5|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C5 /

Query: 1 CICPGPGS 8
C CPG GS
Sbjct: 183 CACPGAGS 190


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 CICPGPGS 8
C CPG GS
Sbjct: 183 CACPGAGS 190


>sp|ILVD_METM7|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C7 /

Query: 1 CICPGPGS 8
C CPG GS
Sbjct: 183 CACPGAGS 190


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 CICPGPGS 8
C CPG GS
Sbjct: 183 CACPGAGS 190


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CICPGPGS 8
C CPG GS
Sbjct: 183 CACPGAGS 190


>sp|RS4E_ARCFU|SMALL ribosomal subunit protein eS4|Archaeoglobus fulgidus (strain ATCC

Query: 4 PGPGSHN 10
P PG HN
Sbjct: 28 PSPGPHN 34


>sp|FAU1_AERPE|PROBABLE ribonuclease FAU-1|Aeropyrum pernix (strain ATCC 700893

Query: 3 CPGPGS 8
CP PGS
Sbjct: 122 CPQPGS 127


>sp|YI48_METSM|INSERTION element ISM1 uncharacterized 48.3|Methanobrevibacter smithii

Query: 2 ICPGPGSH 9
ICP GSH
Sbjct: 65 ICPVCGSH 72


>sp|HYPA_PYRAB|HYDROGENASE maturation factor HypA|Pyrococcus abyssi (strain GE5 /

Query: 3 CPGPGSHN 10
CP GSH+
Sbjct: 110 CPNCGSHD 117


>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 CICPGPGS 8
C+CPG S
Sbjct: 27 CVCPGSRS 34


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 CICPGPGS 8
C+CPG S
Sbjct: 27 CVCPGSRS 34


>sp|TRPG_SACS2|ANTHRANILATE synthase component 2|Saccharolobus solfataricus (strain ATCC

Query: 2 ICPGPGS 8
I PGPG+
Sbjct: 51 ISPGPGT 57


>sp|RS4E_PYRHO|SMALL ribosomal subunit protein eS4|Pyrococcus horikoshii (strain ATCC

Query: 4 PGPGSHN 10
P PG HN
Sbjct: 32 PRPGPHN 38


>sp|RS4E_PYRFU|SMALL ribosomal subunit protein eS4|Pyrococcus furiosus (strain ATCC

Query: 4 PGPGSHN 10
P PG HN
Sbjct: 32 PRPGPHN 38


>sp|RS4E_PYRAB|SMALL ribosomal subunit protein eS4|Pyrococcus abyssi (strain GE5 /

Query: 4 PGPGSHN 10
P PG HN
Sbjct: 32 PRPGPHN 38


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 1 CICPGPGS 8
C CPG GS
Sbjct: 183 CACPGAGS 190


>sp|TRUB_THEON|PROBABLE tRNA pseudouridine synthase B|Thermococcus onnurineus (strain

Query: 4 PGPGSH 9
PGP SH
Sbjct: 55 PGPTSH 60


>sp|TRUB_THEKO|PROBABLE tRNA pseudouridine synthase B|Thermococcus kodakarensis (strain

Query: 4 PGPGSH 9
PGP SH
Sbjct: 55 PGPTSH 60


>sp|TRUB_THEGJ|PROBABLE tRNA pseudouridine synthase B|Thermococcus gammatolerans (strain

Query: 4 PGPGSH 9
PGP SH
Sbjct: 55 PGPTSH 60


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 4 PGPGSH 9
PGP SH
Sbjct: 56 PGPTSH 61


>sp|TRUB_PYRHO|PROBABLE tRNA pseudouridine synthase B|Pyrococcus horikoshii (strain ATCC

Query: 4 PGPGSH 9
PGP SH
Sbjct: 55 PGPTSH 60


>sp|TRUB_PYRFU|PROBABLE tRNA pseudouridine synthase B|Pyrococcus furiosus (strain ATCC

Query: 4 PGPGSH 9
PGP SH
Sbjct: 55 PGPTSH 60


>sp|TRUB_PYRAB|PROBABLE tRNA pseudouridine synthase B|Pyrococcus abyssi (strain GE5 /

Query: 4 PGPGSH 9
PGP SH
Sbjct: 55 PGPTSH 60


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC

Query: 4 PGPGSH 9
PGP SH
Sbjct: 65 PGPTSH 70


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CICPG 5
C CPG
Sbjct: 67 CFCPG 71


>sp|HYPA_THEKO|HYDROGENASE maturation factor HypA|Thermococcus kodakarensis (strain ATCC

Query: 3 CPGPGSHN 10
CP GSH+
Sbjct: 110 CPKCGSHD 117


>sp|HYPA_THEGJ|HYDROGENASE maturation factor HypA|Thermococcus gammatolerans (strain DSM 15229

Query: 3 CPGPGSHN 10
CP GSH+
Sbjct: 110 CPKCGSHD 117


>sp|HYPA_PYRFU|HYDROGENASE maturation factor HypA|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CPGPGSHN 10
CP GSH+
Sbjct: 110 CPKCGSHD 117


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 PGPGS 8
PGPGS
Sbjct: 185 PGPGS 189


>sp|LYSJ_AERPE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 CICPGPG 7
CIC G G
Sbjct: 381 CICGGSG 387


>sp|COFC_METMA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CICPGPG 7
CI PG G
Sbjct: 114 CIVPGKG 120


>sp|COFC_METBF|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CICPGPG 7
CI PG G
Sbjct: 114 CIVPGKG 120


>sp|COFC_METAC|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CICPGPG 7
CI PG G
Sbjct: 114 CIVPGKG 120


>sp|RS12_METMA|SMALL ribosomal subunit protein uS12|Methanosarcina mazei (strain ATCC

Query: 3 CPGPGSHN 10
CPG G+ N
Sbjct: 83 CPGDGAVN 90


>sp|RS12_METAC|SMALL ribosomal subunit protein uS12|Methanosarcina acetivorans (strain

Query: 3 CPGPGSHN 10
CPG G+ N
Sbjct: 83 CPGDGAVN 90


>sp|RS12_METAR|SMALL ribosomal subunit protein uS12|Methanocella arvoryzae (strain DSM

Query: 3 CPGPGSHN 10
CPG G+ N
Sbjct: 83 CPGDGAIN 90


>sp|RS12_ARCFU|SMALL ribosomal subunit protein uS12|Archaeoglobus fulgidus (strain

Query: 3 CPGPGSHN 10
CPG G+ N
Sbjct: 83 CPGDGAIN 90


>sp|HYPA_PYRHO|HYDROGENASE maturation factor HypA|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 CPGPGSHN 10
CP GSH+
Sbjct: 110 CPRCGSHD 117


>sp|COFC_METAR|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 2 ICPGPG 7
ICPG G
Sbjct: 111 ICPGRG 116


>sp|TFE_PYRCJ|TRANSCRIPTION factor E|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 ICPGPGSH 9
+CP GSH
Sbjct: 140 VCPICGSH 147


>sp|ILVD_NATPD|DIHYDROXY-ACID dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 CPGPGS 8
CPG GS
Sbjct: 211 CPGAGS 216


>sp|KPTA_HALMA|PROBABLE RNA 2'-phosphotransferase|Haloarcula marismortui (strain ATCC

Query: 2 ICPGPGSH 9
+C G G+H
Sbjct: 21 VCDGAGTH 28


>sp|RS12_METBF|SMALL ribosomal subunit protein uS12|Methanosarcina barkeri (strain

Query: 3 CPGPGSHN 10
CPG G+ N
Sbjct: 83 CPGDGAVN 90


>sp|ILVD_HALMA|DIHYDROXY-ACID dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 3 CPGPGS 8
CPG GS
Sbjct: 200 CPGAGS 205


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 CICPGPG 7
CI GPG
Sbjct: 261 CILEGPG 267


>sp|CSX1_METJA|CRISPR system endoribonuclease Csx1|Methanocaldococcus jannaschii

Query: 2 ICPGPGS 8
+CPG G+
Sbjct: 89 VCPGVGT 95


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 CICPGPGSHN 10
C CP SH+
Sbjct: 278 CSCPVCSSHD 287


>sp|RS12_PYRHO|SMALL ribosomal subunit protein uS12|Pyrococcus horikoshii (strain ATCC

Query: 3 CPGPGSHN 10
CPG G+ N
Sbjct: 88 CPGDGAIN 95


>sp|RS12_METBU|SMALL ribosomal subunit protein uS12|Methanococcoides burtonii (strain

Query: 3 CPGPGSHN 10
CPG G+ N
Sbjct: 83 CPGDGAIN 90


>sp|HEM1_HALSA|GLUTAMYL-TRNA reductase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ICPGPGSHN 10
+ PG G H+
Sbjct: 276 VAPGAGGHD 284


>sp|HEM1_HALS3|GLUTAMYL-TRNA reductase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ICPGPGSHN 10
+ PG G H+
Sbjct: 276 VAPGAGGHD 284


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CPGPGS 8
CPG GS
Sbjct: 185 CPGAGS 190


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 CPGPGS 8
CPG GS
Sbjct: 179 CPGAGS 184


>sp|TRPG_METTH|ANTHRANILATE synthase component 2|Methanothermobacter thermautotrophicus

Query: 2 ICPGPGS 8
I PGPG+
Sbjct: 57 ISPGPGN 63


>sp|PYRDB_METAR|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanocella arvoryzae

Query: 4 PGPGSHN 10
P PG HN
Sbjct: 50 PKPGHHN 56


>sp|ILVD_METMP|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 1 CICPGPGS 8
C C G GS
Sbjct: 183 CACSGAGS 190




171|SequenceR|860|851|TLNEFCICPG

>sp|TFE_METS5|TRANSCRIPTION factor E|Metallosphaera sedula (strain ATCC 51363

Query: 1 TLNEFCICP 9
T NEF ICP
Sbjct: 111 TNNEFYICP 119


>sp|PYCA_METJA|PYRUVATE carboxylase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LNEFCICPG 10
LN+F CPG
Sbjct: 344 LNDFVPCPG 352


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 4 EFCICP 9
+FC+CP
Sbjct: 325 DFCMCP 330


>sp|GLMM_METST|PROBABLE phosphoglucosamine mutase|Methanosphaera stadtmanae (strain ATCC

Query: 4 EFCICP 9
+FC+CP
Sbjct: 329 DFCMCP 334


>sp|GLMM_METS3|PROBABLE phosphoglucosamine mutase|Methanobrevibacter smithii (strain ATCC

Query: 4 EFCICP 9
+FC+CP
Sbjct: 322 DFCMCP 327


>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 6 CICPG 10
C+CPG
Sbjct: 27 CVCPG 31


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 6 CICPG 10
C+CPG
Sbjct: 27 CVCPG 31


>sp|IF2B_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 LNEFCICP 9
L EF ICP
Sbjct: 103 LKEFVICP 110


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 5 FCICP 9
FC+CP
Sbjct: 26 FCLCP 30


>sp|Y909_METM5|UPF0305 protein MmarC5_0909|Methanococcus maripaludis (strain C5 /

Query: 1 TLNEFCIC 8
++ EFCIC
Sbjct: 149 SICEFCIC 156


>sp|Y646_METJA|UPF0305 protein MJ0646|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TLNEFCIC 8
+L EFC+C
Sbjct: 150 SLCEFCVC 157


>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 EFCICPG 10
E C CPG
Sbjct: 181 ERCACPG 187


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 EFCICPG 10
E C CPG
Sbjct: 181 ETCACPG 187


>sp|Y1691_METM7|UPF0305 protein MmarC7_1691|Methanococcus maripaludis (strain C7 /

Query: 1 TLNEFCIC 8
++ EFCIC
Sbjct: 149 SICEFCIC 156


>sp|Y665_METMP|UPF0305 protein MMP0665|Methanococcus maripaludis (strain DSM 14266

Query: 1 TLNEFCIC 8
++ EFCIC
Sbjct: 149 SICEFCIC 156


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 EFCICPG 10
E C CPG
Sbjct: 181 EKCACPG 187


>sp|IF2B_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 2 LNEFCICP 9
+NE+ +CP
Sbjct: 99 VNEYVLCP 106


>sp|IF2B_METM5|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C5 /

Query: 2 LNEFCICP 9
+NE+ +CP
Sbjct: 99 VNEYVLCP 106


>sp|IF2B_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 2 LNEFCICP 9
+NE+ +CP
Sbjct: 99 VNEYVLCP 106


>sp|IF2B_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7 /

Query: 2 LNEFCICP 9
+NE+ +CP
Sbjct: 99 VNEYVLCP 106


>sp|IF2B_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6 /

Query: 2 LNEFCICP 9
+NE+ +CP
Sbjct: 99 VNEYVLCP 106


>sp|ILVD_METM5|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C5 /

Query: 4 EFCICPG 10
E C CPG
Sbjct: 181 EECACPG 187


>sp|ILVD_METM7|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C7 /

Query: 4 EFCICPG 10
E C CPG
Sbjct: 181 EECACPG 187


>sp|Y1109_ARCFU|UNCHARACTERIZED protein AF_1109|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 FCICP 9
FC CP
Sbjct: 64 FCTCP 68


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 5 FCICP 9
FC CP
Sbjct: 24 FCTCP 28


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 4 EFCICPG 10
E C CPG
Sbjct: 181 EDCACPG 187


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 EFCICPG 10
E C CPG
Sbjct: 181 ERCACPG 187


>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 5 FCICP 9
FC CP
Sbjct: 28 FCACP 32


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 5 FCICP 9
FC CP
Sbjct: 28 FCACP 32


>sp|Y823_METJA|UNCHARACTERIZED ATP-binding protein MJ0823|Methanocaldococcus jannaschii (strain

Query: 4 EFCICPG 10
E C+CP
Sbjct: 110 EGCVCPA 116


>sp|Y875_METJA|UNCHARACTERIZED protein MJ0875|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TLNEFCIC 8
TLN F IC
Sbjct: 668 TLNAFPIC 675


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 2 LNEFC 6
LNEFC
Sbjct: 169 LNEFC 173


>sp|CAS7_THETK|CRISPR-ASSOCIATED protein Cas7/Cst2/DevR|Thermoproteus tenax (strain ATCC 35583

Query: 2 LNEFC 6
LNEFC
Sbjct: 75 LNEFC 79


>sp|Y1214_METKA|UPF0210 protein MK1214|Methanopyrus kandleri (strain AV19 /

Query: 4 EFCICPG 10
E C CPG
Sbjct: 299 ESCGCPG 305


>sp|CBIH_METTH|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanothermobacter

Query: 5 FCICP 9
FC CP
Sbjct: 278 FCYCP 282


>sp|Y1085_PICTO|PUTATIVE adenine deaminase PTO1085|Picrophilus torridus (strain ATCC

Query: 3 NEFCICPG 10
N+F I PG
Sbjct: 89 NDFLIAPG 96


>sp|PUS10_METJA|TRNA pseudouridine synthase Pus10|Methanocaldococcus jannaschii (strain

Query: 2 LNEFCIC 8
LN+ CIC
Sbjct: 431 LNKNCIC 437


>sp|Y221_METM6|UPF0305 protein MmarC6_0221|Methanococcus maripaludis (strain C6 /

Query: 4 EFCICP 9
EFCIC
Sbjct: 152 EFCICK 157




172|SequenceR|865|856|AAQNYTLNEF

>sp|ARGX_SULAC|GLUTAMATE--LYSW ligase ArgX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 AQNYTLNEF 10
++NY +NEF
Sbjct: 243 SKNYVINEF 251


>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 1 AAQNYTLNEF 10
AAQ+Y N F
Sbjct: 272 AAQSYIFNRF 281


>sp|TRUD_PYRAR|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum arsenaticum (strain DSM

Query: 1 AAQNYTLNEF 10
AAQ+Y N F
Sbjct: 272 AAQSYLFNRF 281


>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AQNYTLNEF 10
AQN +LN F
Sbjct: 38 AQNMSLNSF 46


>sp|AMTAB_PYRAB|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 2 AQNYTLNEF 10
+NYT+ EF
Sbjct: 267 GRNYTVEEF 275


>sp|PURP_METTP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothrix thermoacetophila (strain

Query: 2 AQNYTLNEF 10
Q YT+ EF
Sbjct: 181 GQKYTIQEF 189


>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 NYTLNEF 10
NY +NEF
Sbjct: 197 NYFMNEF 203


>sp|SPEH_SACI7|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 AAQNYTLNE 9
A+ YT+NE
Sbjct: 107 GAKKYTINE 115


>sp|SPEH_SACI6|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 1 AAQNYTLNE 9
A+ YT+NE
Sbjct: 107 GAKKYTINE 115


>sp|SPEH_SACI4|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain M.14.25 /

Query: 1 AAQNYTLNE 9
A+ YT+NE
Sbjct: 107 GAKKYTINE 115


>sp|SPEH_SACI3|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain M.16.27)

Query: 1 AAQNYTLNE 9
A+ YT+NE
Sbjct: 107 GAKKYTINE 115


>sp|SPEH_SACI2|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 AAQNYTLNE 9
A+ YT+NE
Sbjct: 107 GAKKYTINE 115


>sp|SPEH_SACI1|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 AAQNYTLNE 9
A+ YT+NE
Sbjct: 107 GAKKYTINE 115


>sp|PURP_METAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina acetivorans (strain ATCC

Query: 3 QNYTLNEF 10
Q YT+ EF
Sbjct: 182 QKYTIQEF 189


>sp|PURP_METBF|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 3 QNYTLNEF 10
Q YT+ EF
Sbjct: 182 QKYTIQEF 189


>sp|PURP1_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 1|Methanosarcina mazei (strain ATCC

Query: 3 QNYTLNEF 10
Q YT+ EF
Sbjct: 182 QKYTIQEF 189


>sp|SPEH_SULAC|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Sulfolobus acidocaldarius (strain ATCC

Query: 2 AQNYTLNE 9
A+ YT+NE
Sbjct: 108 ARRYTMNE 115


>sp|SPEH_SACS2|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus solfataricus (strain ATCC

Query: 1 AAQNYTLNE 9
A+ YT+NE
Sbjct: 109 GAKRYTINE 117


>sp|SPEH_SULTO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 AQNYTLNE 9
A+ YT+NE
Sbjct: 108 AKRYTINE 115


>sp|SPSS1_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanococcoides burtonii (strain DSM 6242

Query: 4 NYTLNEF 10
NY +NEF
Sbjct: 361 NYFINEF 367


>sp|Y2246_METAC|UNCHARACTERIZED serpin-like protein MA_2246|Methanosarcina acetivorans (strain ATCC

Query: 3 QNYTLNE 9
+NYTLNE
Sbjct: 145 ENYTLNE 151


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 3 QNYTLNEF 10
QN+ NEF
Sbjct: 397 QNFATNEF 404


>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 4 NYTLNEF 10
NY +NEF
Sbjct: 193 NYFINEF 199




173|SequenceR|870|861|SGSDSAAQNY

***** No hits found ******


174|SequenceR|875|866|PVHGCSGSDS

>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 1 PVHGCSGSDS 10
P+H C+G+D+
Sbjct: 343 PLHTCTGTDN 352


>sp|PSTB_METBU|PHOSPHATE import ATP-binding protein PstB|Methanococcoides burtonii (strain

Query: 2 VHGCSGSDS 10
+HGCS S++
Sbjct: 116 IHGCSKSET 124


>sp|AMT2_ARCFU|AMMONIUM transporter Amt2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PVHGCSGS 8
PVHG SG+
Sbjct: 354 PVHGFSGT 361


>sp|PYRF_METST|OROTIDINE 5'-phosphate decarboxylase|Methanosphaera stadtmanae (strain ATCC

Query: 2 VHGCSGSDS 10
VHG +G DS
Sbjct: 89 VHGFTGEDS 97


>sp|P5CR_METSM|PYRROLINE-5-CARBOXYLATE reductase|Methanobrevibacter smithii

Query: 2 VHGCSGSD 9
+H C+G+D
Sbjct: 93 IHTCAGTD 100


>sp|NADA_SULTO|QUINOLINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PVHGCSGSDS 10
P GCS SDS
Sbjct: 79 PNAGCSLSDS 88


>sp|PYRF_METTH|OROTIDINE 5'-phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 2 VHGCSGSDS 10
VHG G+DS
Sbjct: 97 VHGFRGADS 105


>sp|SYY_METST|TYROSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 VHGCSGSD 9
+HG GSD
Sbjct: 203 IHGTDGSD 210


>sp|PYRF_ARCFU|OROTIDINE 5'-phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC

Query: 2 VHGCSGSDS 10
VHG GSD+
Sbjct: 84 VHGFVGSDT 92


>sp|Y883_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 1 PVHGCSG 7
P+H C+G
Sbjct: 86 PIHLCTG 92


>sp|ASSY_PYRFU|ARGININOSUCCINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 HGCSG 7
HGC+G
Sbjct: 113 HGCTG 117


>sp|ASSY_METVA|ARGININOSUCCINATE synthase|Methanococcus vannielii

Query: 3 HGCSG 7
HGC+G
Sbjct: 116 HGCTG 120


>sp|ASSY_METTH|ARGININOSUCCINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 HGCSG 7
HGC+G
Sbjct: 119 HGCTG 123


>sp|ASSY_METST|ARGININOSUCCINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 HGCSG 7
HGC+G
Sbjct: 114 HGCTG 118


>sp|ASSY_METMP|ARGININOSUCCINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 HGCSG 7
HGC+G
Sbjct: 116 HGCTG 120


>sp|ASSY_METMA|ARGININOSUCCINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 HGCSG 7
HGC+G
Sbjct: 115 HGCTG 119


>sp|ASSY_METKA|ARGININOSUCCINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 HGCSG 7
HGC+G
Sbjct: 114 HGCTG 118


>sp|ASSY_METJA|ARGININOSUCCINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HGCSG 7
HGC+G
Sbjct: 115 HGCTG 119


>sp|ASSY_METHJ|ARGININOSUCCINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 HGCSG 7
HGC+G
Sbjct: 116 HGCTG 120


>sp|ASSY_METBU|ARGININOSUCCINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 HGCSG 7
HGC+G
Sbjct: 115 HGCTG 119


>sp|ASSY_METBF|ARGININOSUCCINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 HGCSG 7
HGC+G
Sbjct: 115 HGCTG 119


>sp|ASSY_METBA|ARGININOSUCCINATE synthase|Methanosarcina barkeri

Query: 3 HGCSG 7
HGC+G
Sbjct: 115 HGCTG 119


>sp|ASSY_METAC|ARGININOSUCCINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 HGCSG 7
HGC+G
Sbjct: 115 HGCTG 119


>sp|ASSY_ARCFU|ARGININOSUCCINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HGCSG 7
HGC+G
Sbjct: 112 HGCTG 116


>sp|RNP2_METVS|RIBONUCLEASE P protein component 2|Methanococcus vannielii (strain ATCC 35089

Query: 2 VHGCS 6
+HGCS
Sbjct: 45 IHGCS 49


>sp|PYRF_METJA|OROTIDINE 5'-phosphate decarboxylase|Methanocaldococcus jannaschii (strain

Query: 2 VHGCSGSDS 10
VHG G DS
Sbjct: 85 VHGFVGEDS 93


>sp|ASSY_HALWD|ARGININOSUCCINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 HGCSG 7
HGC+G
Sbjct: 113 HGCTG 117




175|SequenceR|880|871|AKPSVPVHGC

>sp|Y1395_METJA|UNCHARACTERIZED protein MJ1395|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PSVPVHG 9
P +PVHG
Sbjct: 101 PKLPVHG 107


>sp|Y600_THEAC|UPF0147 protein Ta0600|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PSVPVHG 9
P+VP HG
Sbjct: 65 PNVPAHG 71


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 SVPVHG 9
SVPVHG
Sbjct: 599 SVPVHG 604


>sp|MPTA_METTH|GTP cyclohydrolase MptA|Methanothermobacter thermautotrophicus

Query: 3 PSVPVH 8
PS+PVH
Sbjct: 14 PSIPVH 19


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 4 SVPVHG 9
SVP+HG
Sbjct: 559 SVPIHG 564


>sp|Y625_THEVO|UPF0147 protein TV0625|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PSVPVHG 9
P+VP HG
Sbjct: 66 PNVPSHG 72


>sp|Y889_METJA|UNCHARACTERIZED protein MJ0889|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AKPSVPVHGC 10
KP + V GC
Sbjct: 247 GKPKLKVRGC 256


>sp|RL10_THEON|LARGE ribosomal subunit protein uL10|Thermococcus onnurineus (strain NA1)

Query: 1 AKPSVPV 7
AKP VPV
Sbjct: 111 AKPGVPV 117


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 4 SVPVHGC 10
++PV+GC
Sbjct: 660 TIPVYGC 666


>sp|KAE1_CALMQ|TRNA N6-adenosine threonylcarbamoyltransferase|Caldivirga maquilingensis

Query: 2 KPSVPVH 8
KP VPVH
Sbjct: 101 KPLVPVH 107


>sp|HPCAL_NITMS|3-HYDROXYPROPIONATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 3 PSVPVH 8
P+VP+H
Sbjct: 591 PAVPIH 596


>sp|Y403_METJA|MEMO1 family protein MJ0403|Methanocaldococcus jannaschii (strain ATCC

Query: 4 SVPVHG 9
S+PVHG
Sbjct: 37 SMPVHG 42




176|SequenceR|885|876|GLMSPAKPSV

>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GLMSPAKPSV 10
GLM P P V
Sbjct: 46 GLMDPISPGV 55


>sp|APGM1_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanothermobacter thermautotrophicus

Query: 1 GLMSPAKPSV 10
G+M P KP V
Sbjct: 43 GIMDPIKPGV 52


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 1 GLMSPAKPS 9
GL+ PA+P+
Sbjct: 107 GLIHPARPT 115


>sp|TDXH_METTH|PEROXIREDOXIN thermautotrophicus (strain ATCC 29096

Query: 1 GLMSPAKPS 9
GL+ PA+P+
Sbjct: 107 GLIHPARPT 115


>sp|APGM_SACI7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain

Query: 1 GLMSPAKPSV 10
GLM P P V
Sbjct: 46 GLMDPISPGV 55


>sp|APGM_SACI2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 GLMSPAKPSV 10
GLM P P V
Sbjct: 46 GLMDPISPGV 55


>sp|APGM_SACI1|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain

Query: 1 GLMSPAKPSV 10
GLM P P V
Sbjct: 46 GLMDPISPGV 55


>sp|APGM_SACI6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GLMSPAKPSV 10
GLM P P V
Sbjct: 46 GLMDPISPGV 55


>sp|APGM_SACI4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.14.25

Query: 1 GLMSPAKPSV 10
GLM P P V
Sbjct: 46 GLMDPISPGV 55


>sp|APGM_SACI3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.27)

Query: 1 GLMSPAKPSV 10
GLM P P V
Sbjct: 46 GLMDPISPGV 55


>sp|RS3_HYPBU|SMALL ribosomal subunit protein uS3|Hyperthermus butylicus (strain DSM

Query: 2 LMSPAKPS 9
++ PAKPS
Sbjct: 183 IVKPAKPS 190


>sp|APGM_METKA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 GLMSPAKPSV 10
GL+ P +P V
Sbjct: 50 GLLDPIRPGV 59




177|SequenceR|890|881|PSTMLGLMSP

>sp|APGM_SACI6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 STMLGLMSP 10
S+M+GLM P
Sbjct: 42 SSMIGLMDP 50


>sp|APGM_SACI4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.14.25

Query: 2 STMLGLMSP 10
S+M+GLM P
Sbjct: 42 SSMIGLMDP 50


>sp|APGM_SACI3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.27)

Query: 2 STMLGLMSP 10
S+M+GLM P
Sbjct: 42 SSMIGLMDP 50


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 1 PSTMLGL 7
PSTMLG+
Sbjct: 128 PSTMLGI 134


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 1 PSTMLGL 7
PSTMLG+
Sbjct: 128 PSTMLGI 134


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 PSTMLGLM 8
P+TM GLM
Sbjct: 124 PATMRGLM 131


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 1 PSTMLGLM 8
P+TM GLM
Sbjct: 118 PATMRGLM 125


>sp|APGM_SACI7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain

Query: 2 STMLGLMSP 10
++M+GLM P
Sbjct: 42 NSMIGLMDP 50


>sp|APGM_SACI2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain L.S.2.15

Query: 2 STMLGLMSP 10
++M+GLM P
Sbjct: 42 NSMIGLMDP 50


>sp|APGM_SACI1|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain

Query: 2 STMLGLMSP 10
++M+GLM P
Sbjct: 42 NSMIGLMDP 50


>sp|APGM_SACS2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus solfataricus (strain ATCC

Query: 2 STMLGLMSP 10
++M+GLM P
Sbjct: 42 NSMIGLMDP 50


>sp|APGM_METS5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Metallosphaera sedula (strain ATCC 51363

Query: 2 STMLGLMSP 10
S+++GLM P
Sbjct: 42 SSLVGLMDP 50




178|SequenceR|895|886|KLVNEPSTML

>sp|AATC_THEON|A-TYPE ATP synthase subunit C|Thermococcus onnurineus (strain NA1)

Query: 1 KLVNEPST 8
K+VNEP++
Sbjct: 137 KMVNEPAS 144


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LVNEPSTML 10
L+N P+T+L
Sbjct: 114 LINVPTTLL 122


>sp|ARGB_METMP|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 3 VNEPSTM 9
VN+PST+
Sbjct: 220 VNDPSTL 226




179|SequenceR|900|891|NKELAKLVNE

>sp|HEM1_AERPE|GLUTAMYL-TRNA reductase|Aeropyrum pernix (strain ATCC 700893

Query: 3 ELAKLVNE 10
ELAKL+NE
Sbjct: 228 ELAKLINE 235


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 KELAKLVNE 10
KE+ KL+NE
Sbjct: 906 KEIPKLINE 914


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 1 NKELAKLVNE 10
NKE+ KL+ E
Sbjct: 657 NKEIIKLITE 666


>sp|PFDB_PYRCJ|PREFOLDIN subunit beta|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 NKELAKL 7
NKELAKL
Sbjct: 108 NKELAKL 114


>sp|PFDB_PYRAE|PREFOLDIN subunit beta|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 NKELAKL 7
NKELAKL
Sbjct: 108 NKELAKL 114


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NKELAKLVNE 10
KE+ KLVN+
Sbjct: 878 GKEIPKLVNQ 887


>sp|Y034_PYRHO|UPF0284 protein PH0034|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KELAKLVNE 10
KEL K+ NE
Sbjct: 127 KELEKIANE 135


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NKELAKLVNE 10
KE+ KL+NE
Sbjct: 891 GKEVMKLINE 900


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 KELAKLVNE 10
KE+ KL+NE
Sbjct: 892 KEVMKLINE 900


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 KELAKLVNE 10
KE+ KL+NE
Sbjct: 892 KEVMKLINE 900




180|SequenceR|905|896|LSNMYNKELA

>sp|COBQ_METST|PROBABLE cobyric acid synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 NMYNKELA 10
NMY+K+LA
Sbjct: 141 NMYDKDLA 148


>sp|RFHPS_METJA|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LSNMYNKEL 9
+S +YNKE+
Sbjct: 114 ISKIYNKEM 122


>sp|MVK_METJA|MEVALONATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSNMYNKEL 9
+S YNKEL
Sbjct: 123 VSGFYNKEL 131


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 NMYNKEL 9
++YNKEL
Sbjct: 445 SLYNKEL 451


>sp|Y1375_METJA|UNCHARACTERIZED membrane protein MJ1375|Methanocaldococcus jannaschii (strain

Query: 1 LSNMYNKELA 10
+SN+Y+K +A
Sbjct: 12 MSNLYSKGMA 21




181|SequenceR|910|901|APIEGLSNMY

>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 APIEGLSNM 9
APIEG++N+
Sbjct: 117 APIEGIANV 125


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 APIEGLSNMY 10
AP+EG++++Y
Sbjct: 122 APLEGIADVY 131


>sp|TOP6A_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 2 PIEGLSNMY 10
P+ GLSN+Y
Sbjct: 48 PMRGLSNVY 56


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 APIEGLSNMY 10
AP+EG++++Y
Sbjct: 117 APLEGIADVY 126


>sp|TOP6A_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PIEGLSNMY 10
P GLSN+Y
Sbjct: 45 PTRGLSNVY 53


>sp|ADHS2_ARCFU|PUTATIVE 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase

Query: 1 APIEGLSNM 9
PIEGL N+
Sbjct: 33 GPIEGLKNL 41


>sp|KCY_HALLT|CYTIDYLATE kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 APIEGLS 7
APIEG+S
Sbjct: 183 APIEGVS 189


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 4 EGLSNMY 10
EG+SN+Y
Sbjct: 49 EGISNLY 55


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PIEGLSNMY 10
PIEG N Y
Sbjct: 213 PIEGKENEY 221


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PIEGLSNMY 10
PI GL N Y
Sbjct: 208 PIHGLMNEY 216


>sp|PUR7_ARCFU|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 4 EGLSNMY 10
EG+SN+Y
Sbjct: 295 EGVSNLY 301


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 APIEGLSNM 9
APIEG++++
Sbjct: 117 APIEGIASV 125


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PIEGLSNMY 10
P+EG N Y
Sbjct: 209 PVEGEDNTY 217


>sp|TOP6A_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 2 PIEGLSNMY 10
P GL+N+Y
Sbjct: 45 PTRGLNNVY 53


>sp|TOP6A_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PIEGLSNMY 10
P GL+N+Y
Sbjct: 45 PTRGLNNVY 53


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 APIEGLSNM 9
APIEG++ +
Sbjct: 113 APIEGIARV 121


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 APIEGLSNM 9
APIEG++ +
Sbjct: 117 APIEGIAKV 125


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 APIEGLSNM 9
APIEG++ +
Sbjct: 136 APIEGIARV 144


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PIEGLSNMY 10
P+EG N Y
Sbjct: 213 PVEGKENEY 221


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 PIEGLSNMY 10
P+EG N Y
Sbjct: 213 PVEGKENEY 221


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 APIEGLS 7
AP+EG+S
Sbjct: 119 APLEGIS 125


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 APIEGLSNM 9
APIEG++ +
Sbjct: 120 APIEGINKV 128




182|SequenceR|915|906|LSTEGAPIEG

>sp|PYLB_METBF|3-METHYLORNITHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LSTEGAPIEG 10
L EG P+EG
Sbjct: 240 LPQEGTPLEG 249


>sp|KTHY_STAMF|PROBABLE thymidylate kinase|Staphylothermus marinus (strain ATCC 43588

Query: 2 STEGAPIE 9
S +GAPIE
Sbjct: 105 SAQGAPIE 112


>sp|ADEC_META3|ADENINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LSTEGAPI 8
L T GAPI
Sbjct: 153 LETNGAPI 160


>sp|DHYS_THEGJ|PROBABLE deoxyhypusine synthase|Thermococcus gammatolerans (strain DSM

Query: 3 TEGAPIEG 10
EG PIEG
Sbjct: 15 VEGTPIEG 22


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 5 GAPIEG 10
GAPIEG
Sbjct: 437 GAPIEG 442


>sp|DHYS_THEON|PROBABLE deoxyhypusine synthase|Thermococcus onnurineus (strain NA1)

Query: 4 EGAPIEG 10
EG PIEG
Sbjct: 16 EGTPIEG 22


>sp|DHYS_THEKO|PROBABLE deoxyhypusine synthase|Thermococcus kodakarensis (strain ATCC

Query: 3 TEGAPIEG 10
EG PIEG
Sbjct: 15 VEGIPIEG 22


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 4 EGAPIEG 10
+G PIEG
Sbjct: 36 DGTPIEG 42


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 4 EGAPIEG 10
+G PIEG
Sbjct: 36 DGTPIEG 42


>sp|HYPA_METKA|HYDROGENASE maturation factor HypA|Methanopyrus kandleri (strain AV19 /

Query: 4 EGAPIEG 10
EG P+EG
Sbjct: 53 EGTPVEG 59


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain

Query: 4 EGAPIEG 10
+G PIEG
Sbjct: 36 DGTPIEG 42


>sp|ILVD_HALMA|DIHYDROXY-ACID dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 2 STEGAPIE 9
TEG PIE
Sbjct: 78 DTEGMPIE 85




183|SequenceR|920|911|QSVYNLSTEG

>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VYNLSTEG 10
VYNL EG
Sbjct: 715 VYNLEVEG 722


>sp|Y515_METJA|UNCHARACTERIZED protein MJ0515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SVYNLSTE 9
+VYNLS E
Sbjct: 114 AVYNLSIE 121


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QSVYNLSTEG 10
+S +NL T+G
Sbjct: 73 ESAFNLDTDG 82


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QSVYNLSTE 9
Q VY+++TE
Sbjct: 642 QEVYDITTE 650


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 3 VYNLSTEG 10
+ N+STEG
Sbjct: 651 ILNMSTEG 658


>sp|MAP2_ARCFU|METHIONINE aminopeptidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SVYNLSTE 9
S+YN +TE
Sbjct: 167 SIYNYATE 174




184|SequenceR|925|916|MPSALQSVYN

>sp|AAT_METJA|PROBABLE aspartate aminotransferase|Methanocaldococcus jannaschii (strain

Query: 2 PSALQSVYN 10
PSA++ ++N
Sbjct: 11 PSAIREIFN 19




185|SequenceR|930|921|DKDGFMPSAL

>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DGFMPSA 9
DGFMPS
Sbjct: 70 DGFMPSG 76


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KDGFMPSAL 10
KDG+ P A+
Sbjct: 318 KDGYFPKAI 326


>sp|SYW_METAC|TRYPTOPHAN--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DGFMPSA 9
DGFMPS
Sbjct: 70 DGFMPSG 76


>sp|SYW_ARCFU|TRYPTOPHAN--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GFMPSAL 10
GFMPS L
Sbjct: 69 GFMPSGL 75


>sp|RS4_METTH|SMALL ribosomal subunit protein uS4|Methanothermobacter

Query: 1 DKDGFMPSA 9
DK GF PS+
Sbjct: 150 DKIGFYPSS 158


>sp|FLAB4_THEKO|FLAGELLIN B4|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DKDGFMPS 8
DKDG PS
Sbjct: 179 DKDGIGPS 186


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 DKDGFMPSAL 10
D GF+PS L
Sbjct: 411 DVQGFIPSLL 420


>sp|Y994_METTH|PUTATIVE aminohydrolase MTH_994|Methanothermobacter thermautotrophicus

Query: 3 DGFMPSAL 10
DGF PS +
Sbjct: 175 DGFAPSGM 182




186|SequenceR|935|926|NTPLSDKDGF

>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 TPLSDKD 8
+PLSD+D
Sbjct: 181 SPLSDRD 187


>sp|RS4E_PYRAB|SMALL ribosomal subunit protein eS4|Pyrococcus abyssi (strain GE5 /

Query: 3 PLSDKDGF 10
PLS+KD +
Sbjct: 151 PLSEKDNY 158


>sp|RAD50_METTH|DNA double-strand break repair Rad50|Methanothermobacter

Query: 2 TPLSDKDGF 10
TP+ ++DG+
Sbjct: 730 TPIVEQDGY 738


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 2 TPLSDKD 8
TPL DKD
Sbjct: 345 TPLCDKD 351


>sp|Y912_METMA|UPF0288 protein MM_0912|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NTPLSDKD 8
+TPL D+D
Sbjct: 200 STPLEDED 207


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 3 PLSDKD 8
P+SDKD
Sbjct: 81 PMSDKD 86


>sp|RS6E_THEON|SMALL ribosomal subunit protein eS6|Thermococcus onnurineus (strain

Query: 5 SDKDGF 10
+DKDGF
Sbjct: 67 TDKDGF 72


>sp|RS6E_THEGJ|SMALL ribosomal subunit protein eS6|Thermococcus gammatolerans (strain

Query: 5 SDKDGF 10
+DKDGF
Sbjct: 67 TDKDGF 72




187|SequenceR|940|931|PAEVPNTPLS

>sp|DAPB_METS3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 EVPNTPLS 10
E+PN+PL+
Sbjct: 34 EIPNSPLA 41


>sp|RS3_HYPBU|SMALL ribosomal subunit protein uS3|Hyperthermus butylicus (strain DSM

Query: 2 AEVPNTPL 9
E PNTPL
Sbjct: 232 GEAPNTPL 239


>sp|DAPB_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 EVPNTPLS 10
E+PN+PL+
Sbjct: 34 EMPNSPLA 41


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PAEVPNT 7
PAEVP T
Sbjct: 781 PAEVPET 787


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PAEVPNT 7
PAEVP T
Sbjct: 781 PAEVPET 787


>sp|SERC_METBF|PHOSPHOSERINE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PAEVPNTP 8
P VPN P
Sbjct: 3 PTRVPNNP 10


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 2 AEVPNTPLS 10
+E+P TP+S
Sbjct: 279 SEMPETPIS 287


>sp|SYE_NITMS|GLUTAMATE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 EVPNTPLS 10
EVPN P++
Sbjct: 429 EVPNHPIN 436


>sp|MPG1_SULAC|PUTATIVE mannose-1-phosphate guanyltransferase|Sulfolobus acidocaldarius

Query: 3 EVPNTPLS 10
E P TPLS
Sbjct: 157 EKPKTPLS 164


>sp|EF1A_METS3|ELONGATION factor 1-alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PAEVPNTPLS 10
PA+VP P+S
Sbjct: 166 PADVPFIPVS 175


>sp|NEP_NATMA|HALOLYSIN-LIKE extracellular serine protease Nep|Natrialba magadii

Query: 3 EVPNTPL 9
EVPN P+
Sbjct: 120 EVPNDPM 126




188|SequenceR|945|936|YESCHPAEVP

>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YESCHPAEVP 10
+ SC+P E+P
Sbjct: 836 FYSCNPQEIP 845


>sp|PDXS_PYRCJ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum calidifontis

Query: 5 HPAEVP 10
HPAEVP
Sbjct: 34 HPAEVP 39


>sp|Y589_METMA|UPF0179 protein MM_0589|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YESCHP 6
YE+CHP
Sbjct: 109 YETCHP 114


>sp|PURT_IGNH4|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Ignicoccus hospitalis

Query: 1 YESCHPAEV 9
YES HPA V
Sbjct: 238 YESWHPATV 246


>sp|METE_PYRFU|METHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 HPAEVP 10
HP+EVP
Sbjct: 185 HPSEVP 190


>sp|RPO11_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo11|Aeropyrum pernix (strain ATCC 700893

Query: 1 YESCHPAE 8
YE+ HP E
Sbjct: 44 YEAVHPME 51


>sp|EI2BL_PYRFU|PUTATIVE translation initiation factor eIF-2B|Pyrococcus furiosus (strain

Query: 3 SCHPAEVP 10
SC+ +EVP
Sbjct: 206 SCYESEVP 213


>sp|EI2BL_PYRAB|PUTATIVE translation initiation factor eIF-2B|Pyrococcus abyssi (strain GE5

Query: 3 SCHPAEVP 10
+CH ++VP
Sbjct: 206 ACHESDVP 213


>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 4 CHPAEVP 10
C P E+P
Sbjct: 71 CRPKEIP 77


>sp|RL15E_METM7|LARGE ribosomal subunit protein eL15|Methanococcus maripaludis (strain C7

Query: 2 ESCHPA 7
+SCHP+
Sbjct: 134 DSCHPS 139


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ESCHPAEVP 10
ESC P VP
Sbjct: 433 ESCGPVSVP 441


>sp|Y3685_METAC|UPF0179 protein MA_3685|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YESCHP 6
YE CHP
Sbjct: 109 YEVCHP 114


>sp|RL15E_METM6|LARGE ribosomal subunit protein eL15|Methanococcus maripaludis (strain C6

Query: 2 ESCHPA 7
+SCHP+
Sbjct: 134 DSCHPS 139


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YESCHPAE 8
YES +PAE
Sbjct: 697 YESDYPAE 704


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 CHPAE 8
CHPA+
Sbjct: 407 CHPAD 411


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 4 CHPAE 8
CHPA+
Sbjct: 407 CHPAD 411


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 4 CHPAE 8
CHPA+
Sbjct: 410 CHPAD 414


>sp|METE_METTM|METHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 YESCHPA 7
Y++C PA
Sbjct: 30 YDACRPA 36


>sp|RIFK_HALWD|RIBOFLAVIN kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 SCHPAEV 9
+C+PAE+
Sbjct: 175 TCYPAEI 181


>sp|Y292_METBF|UPF0179 protein Mbar_A0292|Methanosarcina barkeri (strain Fusaro /

Query: 1 YESCHP 6
YE CHP
Sbjct: 109 YEICHP 114


>sp|Y2154_ARCFU|UPF0179 protein AF_2154|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YESCHPAEV 9
Y CHP E+
Sbjct: 110 YSLCHPIEL 118


>sp|Y1574_ARCFU|UNCHARACTERIZED protein AF_1574|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ESCHPAEVP 10
ES PAE P
Sbjct: 156 ESARPAEAP 164


>sp|Y1756_METM5|UNCHARACTERIZED solute-binding protein MmarC5_1756|Methanococcus maripaludis

Query: 1 YESCHPAEVP 10
YES + AE P
Sbjct: 56 YESLYEAEYP 65


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 CHPAEVP 10
C PA++P
Sbjct: 305 CGPADIP 311




189|SequenceR|950|941|AMQMKYESCH

>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 4 MKYESCH 10
M+Y +CH
Sbjct: 286 MRYAACH 292


>sp|QUEC_PYRAE|7-CYANO-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AMQMKYESCH 10
AMQ + CH
Sbjct: 165 AMQTAFRICH 174




190|SequenceR|955|946|LRLSVAMQMK

***** No hits found ******


191|SequenceR|960|951|PPPLALRLSV

>sp|CBID_SULTO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PPPLALRLSV 10
P P+ LRL +
Sbjct: 39 PTPIGLRLEI 48


>sp|CBID_SULAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PPPLALRLSV 10
P P+ LRL +
Sbjct: 45 PTPIGLRLEI 54


>sp|CBID_SACS2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 PPPLALRLSV 10
P P+ LRL +
Sbjct: 40 PTPIGLRLEI 49


>sp|CBID_SACI7|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 PPPLALRLSV 10
P P+ LRL +
Sbjct: 40 PTPIGLRLEI 49


>sp|CBID_SACI6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PPPLALRLSV 10
P P+ LRL +
Sbjct: 40 PTPIGLRLEI 49


>sp|CBID_SACI4|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PPPLALRLSV 10
P P+ LRL +
Sbjct: 40 PTPIGLRLEI 49


>sp|CBID_SACI3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 PPPLALRLSV 10
P P+ LRL +
Sbjct: 40 PTPIGLRLEI 49


>sp|CBID_SACI2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 PPPLALRLSV 10
P P+ LRL +
Sbjct: 40 PTPIGLRLEI 49


>sp|CBID_SACI1|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 PPPLALRLSV 10
P P+ LRL +
Sbjct: 40 PTPIGLRLEI 49


>sp|NADK_SACI7|NAD kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PPPLALRL 8
P PL LRL
Sbjct: 186 PKPLTLRL 193


>sp|NADK_SACI6|NAD kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PPPLALRL 8
P PL LRL
Sbjct: 186 PKPLTLRL 193


>sp|NADK_SACI4|NAD kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PPPLALRL 8
P PL LRL
Sbjct: 186 PKPLTLRL 193


>sp|NADK_SACI3|NAD kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PPPLALRL 8
P PL LRL
Sbjct: 186 PKPLTLRL 193


>sp|NADK_SACI2|NAD kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PPPLALRL 8
P PL LRL
Sbjct: 186 PKPLTLRL 193


>sp|NADK_SACI1|NAD kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PPPLALRL 8
P PL LRL
Sbjct: 186 PKPLTLRL 193


>sp|CBID_THEAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 PPPLALRLSV 10
P P+ LR+ V
Sbjct: 40 PTPIGLRIEV 49




192|SequenceR|965|956|SSNETPPPLA

>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SSNETPPP 8
+S ETPPP
Sbjct: 110 TSGETPPP 117


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SSNETPPPL 9
SSN+TP PL
Sbjct: 806 SSNKTPEPL 814


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 SSNETPPP 8
+S +TPPP
Sbjct: 110 TSGQTPPP 117


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 SSNETPPP 8
+S E PPP
Sbjct: 108 TSGEVPPP 115


>sp|OGT_METTH|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 SNETPPPLA 10
SN++ PP+A
Sbjct: 54 SNDSSPPMA 62


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SSNETPPP 8
+S +TPPP
Sbjct: 110 TSGQTPPP 117


>sp|GUAAA_METMJ|GMP synthase [glutamine-hydrolyzing] subunit A|Methanoculleus

Query: 2 SNETPP 7
SNETPP
Sbjct: 32 SNETPP 37


>sp|PANB_HYPBU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 5 TPPPLA 10
TPPP A
Sbjct: 228 TPPPFA 233


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SSNETPPP 8
+S TPPP
Sbjct: 109 TSGTTPPP 116


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 2 SNETPPPLA 10
SN+TPP A
Sbjct: 807 SNDTPPAAA 815


>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 3 NETPP 7
NETPP
Sbjct: 900 NETPP 904




193|SequenceR|970|961|TISSLSSNET

>sp|LADH_META3|LACTALDEHYDE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 ISSLSSNET 10
I SLS NET
Sbjct: 27 IPSLSRNET 35




194|SequenceR|979|966|CYHEGPDLLTISSL

>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 YHEGPDLLT 10
+HEGP +LT
Sbjct: 20 WHEGPSVLT 28


>sp|DTDA_NATPD|D-AMINOACYL-TRNA deacylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 CYHEGPDLLTISSL 14
C H GP + SSL
Sbjct: 137 CTHHGPSTVGCSSL 150


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 YHEGPDLLT 10
+H+GP++LT
Sbjct: 20 WHQGPEVLT 28


>sp|G3P_METTH|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 HEGPDLLTI 11
H GPDL T+
Sbjct: 193 HHGPDLKTV 201


>sp|G3P_PYRNV|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 HEGPDLLTI 11
H GPD+ TI
Sbjct: 194 HHGPDVQTI 202


>sp|G3P_PYRIL|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 HEGPDLLTI 11
H GPD+ TI
Sbjct: 194 HHGPDVQTI 202


>sp|G3P_METST|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 HEGPDLLTI 11
H GPD+ TI
Sbjct: 193 HHGPDVQTI 201


>sp|G3P_HALMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 3 HEGPDLLTI 11
H GPD+ TI
Sbjct: 191 HHGPDVQTI 199


>sp|ARTA_HALVD|ARCHAEOSORTASE A|Haloferax volcanii (strain ATCC 29605

Query: 3 HEGPDLLTI 11
HE P+LLT+
Sbjct: 273 HEVPELLTV 281


>sp|ISCS2_ARCFU|CYSTEINE desulfurase IscS 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GPDLLTISS 13
G D+LTISS
Sbjct: 189 GADMLTISS 197


>sp|ISCS1_ARCFU|CYSTEINE desulfurase IscS 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GPDLLTISS 13
G D+LTISS
Sbjct: 189 GADMLTISS 197


>sp|DTDA_HALLT|D-AMINOACYL-TRNA deacylase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 CYHEGPDLLTISSL 14
C H GP ++ SL
Sbjct: 154 CTHHGPTDTSVPSL 167


>sp|G3P_HALSA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 3 HEGPDLLTI 11
H GPD+ TI
Sbjct: 193 HHGPDVNTI 201


>sp|G3P_HALS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 29341

Query: 3 HEGPDLLTI 11
H GPD+ TI
Sbjct: 193 HHGPDVNTI 201


>sp|G3P_THESM|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus sibiricus (strain DSM 12597

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 191 HHGPDVQTV 199


>sp|G3P_THEON|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 191 HHGPDVQTV 199


>sp|G3P_THEKO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 191 HHGPDVQTV 199


>sp|G3P_PYRWO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus woesei

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 191 HHGPDVQTV 199


>sp|G3P_PYRHO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 191 HHGPDVQTV 199


>sp|G3P_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 191 HHGPDVQTV 199


>sp|G3P_PYRCJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 194 HHGPDVQTV 202


>sp|G3P_PYRAB|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 191 HHGPDVQTV 199


>sp|G3P_METFO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium formicicum

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 194 HHGPDVQTV 202


>sp|G3P_METBR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium bryantii

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 194 HHGPDVQTV 202


>sp|G3P_METB6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoregula boonei (strain DSM 21154

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 193 HHGPDVQTV 201


>sp|DTDA_HALMA|D-AMINOACYL-TRNA deacylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 CYHEGPDLLTISSL 14
C H GP + + S+
Sbjct: 137 CTHHGPTAVGVPSM 150


>sp|G3P_METVS|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 3 HEGPDLLTI 11
H GPD++++
Sbjct: 194 HHGPDVVSV 202


>sp|G3P_METMP|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 3 HEGPDLLTI 11
H GPD++++
Sbjct: 194 HHGPDVVSV 202


>sp|G3P_METM7|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 3 HEGPDLLTI 11
H GPD++++
Sbjct: 194 HHGPDVVSV 202


>sp|G3P_METM6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C6 /

Query: 3 HEGPDLLTI 11
H GPD++++
Sbjct: 194 HHGPDVVSV 202


>sp|G3P_METM5|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 3 HEGPDLLTI 11
H GPD++++
Sbjct: 194 HHGPDVVSV 202


>sp|G3P_METJA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HEGPDLLTI 11
H GPD++++
Sbjct: 197 HHGPDVVSV 205


>sp|G3P_PYRAR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 194 HHGPDVKTV 202


>sp|G3P_METS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 194 HHGPDVKTV 202


>sp|G3P_METKA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 201 HHGPDVKTV 209


>sp|G3P_METFE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermus fervidus

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 193 HHGPDVKTV 201


>sp|G3P_METBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 194 HHGPDVKTV 202


>sp|G3P_ARCFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 195 HHGPDVKTV 203


>sp|G3P2_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 194 HHGPDVKTV 202


>sp|UVRC_METMA|UVRABC system protein C|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 HEGPDLLTI 11
HE PDL+ I
Sbjct: 435 HEMPDLIII 443


>sp|UVRC_METAC|UVRABC system protein C|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 HEGPDLLTI 11
HE PDL+ I
Sbjct: 429 HEMPDLIII 437


>sp|G3P_NATPD|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 HEGPDLLTI 11
H GPD+ TI
Sbjct: 194 HHGPDVNTI 202


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 3 HEGPDLL 9
H GPDL+
Sbjct: 589 HSGPDLI 595


>sp|ILVD_NATPD|DIHYDROXY-ACID dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 YHEGP 6
YHEGP
Sbjct: 431 YHEGP 435


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 4 EGPDLLTISS 13
EG D++T+S+
Sbjct: 216 EGADIMTVST 225


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 EGPDLLTISS 13
EG D++T+S+
Sbjct: 216 EGADIMTVST 225


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 EGPDLLTISS 13
EG D++T+S+
Sbjct: 216 EGADIMTVST 225


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 4 EGPDLLTISS 13
EG D++T+S+
Sbjct: 216 EGADIMTVST 225


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 4 EGPDLLTISS 13
EG D++T+S+
Sbjct: 216 EGADIMTVST 225


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 4 EGPDLLTISS 13
EG D++T+S+
Sbjct: 216 EGADIMTVST 225


>sp|MOAA_METAC|PROBABLE GTP 3',8-cyclase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CYHEGPDLLTISSL 14
C++EG D + SL
Sbjct: 47 CHNEGADCCSCGSL 60


>sp|G3P_METMJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 193 HHGPDVNTV 201


>sp|G3P_METHJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 193 HHGPDVNTV 201


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 2 YHEGPDLLT 10
+H+GP ++T
Sbjct: 20 WHDGPSVIT 28


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 HEGPDLLTI 11
H GPD+ T+
Sbjct: 194 HHGPDVGTV 202


>sp|Y963_METJA|UNCHARACTERIZED protein MJ0963|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YHEGPDLLTISS 13
YHE PD + +S
Sbjct: 347 YHEFPDRVPAAS 358


>sp|Y1137_METTH|UNCHARACTERIZED protein MTH_1137|Methanothermobacter thermautotrophicus (strain

Query: 1 CYHEGP 6
CY EGP
Sbjct: 144 CYLEGP 149


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CYHEGPDLLTI 11
CY++ PD + +
Sbjct: 538 CYNKKPDFVEL 548


>sp|GSA_METPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 CYHEGPDLLTISSL 14
CY PDL T+ +
Sbjct: 250 CYGVTPDLTTLGKI 263


>sp|G3P_PYRAE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 HEGPDLLTI 11
H GPD T+
Sbjct: 194 HHGPDAQTV 202


>sp|FPOL_METMA|F(420)H(2) dehydrogenase subunit L|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 HEGPDLLTI 11
HE P ++TI
Sbjct: 480 HESPAIMTI 488


>sp|DTDA_HALWD|D-AMINOACYL-TRNA deacylase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 CYHEGPDLLTISSL 14
C H GP + SL
Sbjct: 132 CTHHGPTTVGAPSL 145


>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 3 HEGPDLLTISS 13
+EG DL+T S+
Sbjct: 217 NEGADLMTSST 227


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YHEGPDLLTIS 12
Y E PD ++S
Sbjct: 687 YRENPDATSVS 697


>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 HEGPDLLTI 11
H GPD+ ++
Sbjct: 194 HHGPDIKSV 202




THE END