MEFV_HUMAN Blast Output
Viruses
1|Sequence|1|10|MAKTPSDHLL

>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 4 TPSDHL 9
TPSDHL
Sbjct: 902 TPSDHL 907


>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)

Query: 1 MAKTPSDHLL 10
+ K PS+HL+
Sbjct: 20 LCKNPSEHLI 29


>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)

Query: 1 MAKTPSDHLL 10
+ ++PS+HL+
Sbjct: 20 LCRSPSEHLI 29


>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 MAKTPSDHLL 10
+ ++PS+HL+
Sbjct: 20 LCRSPSEHLI 29


>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 1 MAKTPSDHLL 10
+A P+DHL+
Sbjct: 224 IASLPADHLV 233


>sp|ICP27_SHV21|MRNA export factor ICP27 homolog|Saimiriine herpesvirus 2 (strain 11)

Query: 1 MAKTPSDHLL 10
M TP DH++
Sbjct: 297 MQTTPQDHIV 306


>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)

Query: 2 AKTPSDHLL 10
A+T SDH L
Sbjct: 896 ARTESDHTL 904


>sp|VL2_HPV22|MINOR capsid protein L2|Human papillomavirus 22

Query: 4 TPSDHLL 10
TPSDH+
Sbjct: 200 TPSDHVF 206


>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)

Query: 2 AKTPSDHLL 10
A+T SDH L
Sbjct: 897 ARTESDHTL 905


>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK

Query: 2 AKTPSDHLL 10
A+T SDH L
Sbjct: 896 ARTESDHTL 904


>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)

Query: 2 AKTPSDHLL 10
A+T SDH L
Sbjct: 896 ARTESDHTL 904




2|Sequence|6|15|SDHLLSTLEE

>sp|PP220_ASFWA|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 SDHLLSTLEE 10
S HL+STL E
Sbjct: 1635 SQHLISTLTE 1644


>sp|PP220_ASFK5|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 SDHLLSTLEE 10
S HL+STL E
Sbjct: 1635 SQHLISTLTE 1644


>sp|PP220_ASFP4|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 SDHLLSTLEE 10
S HL+STL E
Sbjct: 1634 SQHLISTLTE 1643


>sp|PP220_ASFB7|POLYPROTEIN pp220|African swine fever virus (strain

Query: 1 SDHLLSTLEE 10
S HL+STL E
Sbjct: 1635 SQHLISTLTE 1644


>sp|PP220_ASFM2|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 SDHLLSTLEE 10
S HL+STL E
Sbjct: 1635 SQHLISTLTE 1644


>sp|YL684_MIMIV|UNCHARACTERIZED protein L684|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 DHLLSTLEE 10
DH+LSTL +
Sbjct: 222 DHILSTLND 230


>sp|Y013_OSHVF|UNCHARACTERIZED protein ORF13|Ostreid herpesvirus 1 (isolate France)

Query: 1 SDHLLSTLEE 10
SD +STL+E
Sbjct: 33 SDDFISTLQE 42


>sp|RDRP_IBDVU|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus

Query: 1 SDHLLSTL 8
++HLLSTL
Sbjct: 492 NNHLLSTL 499


>sp|RDRP_IBDVB|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus

Query: 1 SDHLLSTL 8
++HLLSTL
Sbjct: 492 NNHLLSTL 499


>sp|RDRP_IBDV|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus

Query: 1 SDHLLSTL 8
++HLLSTL
Sbjct: 492 NNHLLSTL 499


>sp|RDRP_IBDVA|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus

Query: 1 SDHLLSTL 8
++HLLSTL
Sbjct: 491 NNHLLSTL 498


>sp|RDRP_IBDV5|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus

Query: 1 SDHLLSTL 8
++HLLSTL
Sbjct: 166 NNHLLSTL 173




3|Sequence|11|20|STLEELVPYD

>sp|RPB5_ASFK5|DNA-DIRECTED RNA polymerase RPB5 homolog|African swine fever virus (isolate

Query: 3 LEELVPYD 10
LEE VPYD
Sbjct: 22 LEEKVPYD 29


>sp|RPB5_ASFP4|DNA-DIRECTED RNA polymerase RPB5 homolog|African swine fever virus (isolate

Query: 3 LEELVPYD 10
LEE VPYD
Sbjct: 22 LEEKVPYD 29


>sp|RPB5_ASFM2|DNA-DIRECTED RNA polymerase RPB5 homolog|African swine fever virus (isolate

Query: 3 LEELVPYD 10
LEE VPYD
Sbjct: 22 LEEKVPYD 29


>sp|RPB5_ASFWA|DNA-DIRECTED RNA polymerase RPB5 homolog|African swine fever virus (isolate

Query: 3 LEELVPYD 10
LEE VPYD
Sbjct: 22 LEEKVPYD 29


>sp|RPB5_ASFB7|DNA-DIRECTED RNA polymerase RPB5 homolog|African swine fever virus (strain

Query: 3 LEELVPYD 10
LEE VPYD
Sbjct: 22 LEEKVPYD 29


>sp|US19_HCMVM|TRANSMEMBRANE protein US19|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 TLEELVPY 9
T+EE+VPY
Sbjct: 10 TVEEVVPY 17


>sp|US19_HCMVT|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2 TLEELVPY 9
T+EE+VPY
Sbjct: 10 TVEEVVPY 17


>sp|US19_HCMVA|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 TLEELVPY 9
T+EE+VPY
Sbjct: 10 TVEEVVPY 17


>sp|389L_IIV6|PROBABLE serine/threonine-protein kinase 389L|Invertebrate iridescent virus

Query: 2 TLEELVPY 9
T EEL PY
Sbjct: 396 TFEELPPY 403


>sp|C8_VACCC|PROTEIN C8|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 TLEELVPY 9
T E+LVPY
Sbjct: 39 TYEDLVPY 46


>sp|C8_VACCW|PROTEIN C8|Vaccinia virus (strain Western Reserve)

Query: 2 TLEELVPY 9
T E+LVPY
Sbjct: 39 TYEDLVPY 46


>sp|ORF2P_CXB3N|ORF2P protein|Coxsackievirus B3 (strain Nancy)

Query: 2 TLEELVPY 9
T+E L+PY
Sbjct: 3 TIERLLPY 10


>sp|DPOL_SHV21|DNA polymerase catalytic subunit|Saimiriine herpesvirus 2 (strain 11)

Query: 2 TLEELVPY 9
TL+E+VP+
Sbjct: 718 TLQEIVPH 725




4|Sequence|16|25|LVPYDFEKFK

>sp|YONO_BPSPB|DNA-DIRECTED RNA polymerase YonO|Bacillus phage SPbeta (Bacillus phage

Query: 1 LVPYDFEKF 9
LVP+DF KF
Sbjct: 274 LVPFDFRKF 282


>sp|VF359_IIV3|UNCHARACTERIZED protein 105R|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 PYDFEKFK 10
P DFEKFK
Sbjct: 141 PVDFEKFK 148


>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 2 VPYDFEKF 9
VP+D EKF
Sbjct: 700 VPFDVEKF 707


>sp|A1_BPQBE|MINOR capsid protein A1|Escherichia virus Qbeta (Bacteriophage Q-beta)

Query: 2 VPYDFEKF 9
+P+DF KF
Sbjct: 306 IPFDFTKF 313


>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 2 VPYDFEKF 9
+P+D EKF
Sbjct: 701 IPFDVEKF 708


>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2

Query: 1 LVPYDFEKF 9
VPYD E F
Sbjct: 178 FVPYDMEPF 186


>sp|VP4_ROTRA|OUTER capsid protein VP4|Rotavirus A (strain RVA/Rabbit/United

Query: 2 VPYDFEKF 9
VP+D E+F
Sbjct: 701 VPFDVERF 708


>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 2 VPYDFEKF 9
VP+D E+F
Sbjct: 701 VPFDVERF 708


>sp|VP4_ROTB4|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 2 VPYDFEKF 9
+P+D EKF
Sbjct: 701 MPFDIEKF 708


>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain

Query: 2 VPYDFEKF 9
+P+D E+F
Sbjct: 700 IPFDMERF 707


>sp|VP4_ROTF1|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 2 VPYDFEKF 9
+P+D E+F
Sbjct: 700 IPFDMERF 707


>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain

Query: 2 VPYDFEKF 9
+P+D E+F
Sbjct: 700 IPFDMERF 707


>sp|A1_BPMX1|MINOR capsid protein A1|Qbeta virus (strain MX1)

Query: 2 VPYDFEKF 9
+P+DF +F
Sbjct: 306 IPFDFSEF 313


>sp|VP4_ROTB5|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 2 VPYDFEKF 9
VP+D +KF
Sbjct: 701 VPFDVQKF 708


>sp|VP4_ROT18|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 2 VPYDFEKF 9
VP+D +KF
Sbjct: 701 VPFDVQKF 708


>sp|L_CDVO|RNA-DIRECTED RNA polymerase L|Canine distemper virus (strain Onderstepoort)

Query: 1 LVPYDFEKFK 10
L YD+E+F+
Sbjct: 1103 LSTYDYEQFR 1112


>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)

Query: 1 LVPYDFEKFK 10
L YD+E+F+
Sbjct: 1103 LSTYDYEQFR 1112


>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 2 VPYDFEKF 9
VP+D +KF
Sbjct: 700 VPFDVDKF 707


>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTD9|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Dog/United

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTF6|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTEH|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Equine/United

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTPY|OUTER capsid protein VP4|Rotavirus A (strain

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTPG|OUTER capsid protein VP4|Rotavirus A (strain RVA/Pig/United

Query: 2 VPYDFEKF 9
VP+D +KF
Sbjct: 700 VPFDVDKF 707


>sp|VP4_ROTRH|OUTER capsid protein VP4|Rotavirus A (strain RVA/Monkey/United

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTCU|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Dog/United

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTRF|OUTER capsid protein VP4|Rotavirus A (strain

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTP5|OUTER capsid protein VP4|Rotavirus A (strain RVA/Pig/United

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain

Query: 2 VPYDFEKF 9
VP+D +KF
Sbjct: 700 VPFDVDKF 707


>sp|VP4_ROTEO|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTP3|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 2 VPYDFEKF 9
VP+D +KF
Sbjct: 701 VPFDVDKF 708


>sp|VP4_ROTBN|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 700 IPFDVQKF 707


>sp|VP4_ROT46|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 703 IPFDVQKF 710


>sp|VP4_ROTS4|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-4F/G3P6[1]) (RV-A)

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 2 VPYDFEKF 9
VP+D +KF
Sbjct: 700 VPFDVDKF 707


>sp|VP4_ROTAP|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Cow/South/Africa/Offal

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTSF|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-FEM/G3P6[1]) (RV-A)

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTEL|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Equine/United

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTME|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|GP40_BPSP1|GENE 40 protein|Bacillus phage SP01 (Bacteriophage SP01)

Query: 1 LVPYDFEK 8
LVPYD K
Sbjct: 70 LVPYDTHK 77


>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7

Query: 3 PYDFEKFK 10
PYD KFK
Sbjct: 353 PYDNSKFK 360


>sp|MVP_SBMVG|P3N-PIPO polyprotein|Soybean mosaic virus (strain G2)

Query: 1 LVPYDFEK 8
+VP DFE+
Sbjct: 561 IVPLDFER 568


>sp|MVP_SBMVN|P3N-PIPO polyprotein|Soybean mosaic virus (strain N)

Query: 1 LVPYDFEK 8
+VP DFE+
Sbjct: 561 IVPLDFER 568


>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 1 LVPYDFEK 8
+VP DFE+
Sbjct: 561 IVPLDFER 568


>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)

Query: 1 LVPYDFEK 8
+VP DFE+
Sbjct: 561 IVPLDFER 568


>sp|VP4_ROTSS|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-SEM/G3P5B[2])

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTSH|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Monkey/South

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|VP4_ROTS1|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-Both/G3P5B[2])

Query: 2 VPYDFEKF 9
+P+D +KF
Sbjct: 701 IPFDVQKF 708


>sp|RPB1_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 1 LVPYDFE 7
L PYDF+
Sbjct: 624 LFPYDFD 630


>sp|Y42_BPT7|PROTEIN 4.2|Escherichia phage T7 (Bacteriophage T7)

Query: 3 PYDFEKFK 10
P D+EKF+
Sbjct: 100 PDDYEKFR 107


>sp|GB_TUHV2|ENVELOPE glycoprotein B|Tupaiid herpesvirus (strain 2) (TuHV-2)

Query: 1 LVPYDFEKF 9
+VPY F+ F
Sbjct: 163 IVPYTFDVF 171


>sp|UBC3_MIMIV|PROBABLE ubiquitin-conjugating enzyme E2 R521|Acanthamoeba polyphaga

Query: 2 VPYDFEKFK 10
+P+D EK +
Sbjct: 779 IPFDLEKLR 787


>sp|G1P_BPM13|GENE 1 protein|Enterobacteria phage M13 (Bacteriophage M13)

Query: 4 YDFEKF 9
YDF+KF
Sbjct: 285 YDFDKF 290


>sp|G1P_BPFD|GENE 1 protein|Enterobacteria phage fd (Bacteriophage fd)

Query: 4 YDFEKF 9
YDF+KF
Sbjct: 285 YDFDKF 290


>sp|G1P_BPF1|GENE 1 protein|Enterobacteria phage f1 (Bacteriophage f1)

Query: 4 YDFEKF 9
YDF+KF
Sbjct: 285 YDFDKF 290




5|Sequence|21|30|FEKFKFKLQN

>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 FEKFKFKLQN 10
FE FK LQN
Sbjct: 865 FENFKNSLQN 874


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 1 FEKFKFKLQN 10
FE FK LQN
Sbjct: 865 FENFKNSLQN 874




6|Sequence|26|35|FKLQNTSVQK

***** No hits found ******


7|Sequence|31|40|TSVQKEHSRI

***** No hits found ******


8|Sequence|36|45|EHSRIPRSQI

>sp|CAPSD_CMVIX|CAPSID protein|Cucumber mosaic virus (strain Ixora)

Query: 1 EHSRIPRSQI 10
EH RIP S++
Sbjct: 206 EHQRIPTSRV 215


>sp|CAPSD_CMVO|CAPSID protein|Cucumber mosaic virus (strain O)

Query: 1 EHSRIPRSQI 10
EH RIP S++
Sbjct: 206 EHQRIPTSRV 215


>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 1 EHSRIPRS 8
EHSR+P S
Sbjct: 648 EHSRLPIS 655


>sp|UL128_HCMVM|ENVELOPE protein UL128|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 EHSRIPR 7
+HSR+PR
Sbjct: 18 DHSRVPR 24


>sp|CAPSD_CMVM|CAPSID protein|Cucumber mosaic virus (strain M)

Query: 1 EHSRIPRSQI 10
EH RIP S++
Sbjct: 206 EHQRIPTSRV 215


>sp|UL128_HCMVA|UNCHARACTERIZED protein UL128|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 HSRIPR 7
HSR+PR
Sbjct: 19 HSRVPR 24


>sp|US03_PSHV1|PROTEIN kinase US3 homolog|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 EHSRIPRSQ 9
E SR+PRS+
Sbjct: 174 EASRVPRSE 182


>sp|CAPSD_CMVAS|CAPSID protein|Cucumber mosaic virus (strain As)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215


>sp|CAPSD_CMVP6|CAPSID protein|Cucumber mosaic virus (strain P6)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215


>sp|CAPSD_CMVY|CAPSID protein|Cucumber mosaic virus (strain Y)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215


>sp|CAPSD_CMVNT|CAPSID protein|Cucumber mosaic virus (strain NT9)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215


>sp|CAPSD_CMVN|CAPSID protein|Cucumber mosaic virus (strain N)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215


>sp|CAPSD_CMVPE|CAPSID protein|Cucumber mosaic virus (strain Pepo)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215


>sp|CAPSD_CMVCS|CAPSID protein|Cucumber mosaic virus (strain CS)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215


>sp|CAPSD_CMVKI|CAPSID protein|Cucumber mosaic virus (strain Kin)

Query: 1 EHSRIPRSQI 10
EH RIP S++
Sbjct: 206 EHQRIPISRM 215


>sp|CAPSD_CMVII|CAPSID protein|Cucumber mosaic virus (strain Iizuka)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215


>sp|CAPSD_CMVFT|CAPSID protein|Cucumber mosaic virus (strain FT)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215


>sp|CAPSD_CMVE5|CAPSID protein|Cucumber mosaic virus (strain E5)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215


>sp|CAPSD_CMVFC|CAPSID protein|Cucumber mosaic virus (strain FC)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215


>sp|CAPSD_CMVC7|CAPSID protein|Cucumber mosaic virus (strain C7-2)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215


>sp|CAPSD_CMVI1|CAPSID protein|Cucumber mosaic virus (strain I17F)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215


>sp|CAPSD_CMVFN|CAPSID protein|Cucumber mosaic virus (strain FNY)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215


>sp|CAPSD_CMVBA|CAPSID protein|Cucumber mosaic virus (strain Banana)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215


>sp|CAPSD_CMVC|CAPSID protein|Cucumber mosaic virus (strain C)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215


>sp|CAPSD_CMVWL|CAPSID protein|Cucumber mosaic virus (strain WL)

Query: 1 EHSRIPRSQI 10
EH RIP S++
Sbjct: 206 EHQRIPISRM 215


>sp|CAPSD_CMVM4|CAPSID protein|Cucumber mosaic virus (strain M48)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215


>sp|CAPSD_CMVS|CAPSID protein|Cucumber mosaic virus (strain S)

Query: 1 EHSRIPRSQI 10
EH RIP S++
Sbjct: 206 EHQRIPISRM 215


>sp|CAPSD_CMVQ|CAPSID protein|Cucumber mosaic virus (strain Q)

Query: 1 EHSRIPRSQI 10
EH RIP S++
Sbjct: 206 EHQRIPISRM 215


>sp|CAPSD_CMVTR|CAPSID protein|Cucumber mosaic virus (strain Trk7)

Query: 1 EHSRIPRSQI 10
EH RIP S++
Sbjct: 206 EHQRIPISRM 215


>sp|CAPSD_CMVDK|CAPSID protein|Cucumber mosaic virus (strain DKRD)

Query: 1 EHSRIPRSQI 10
EH RIP S++
Sbjct: 206 EHQRIPISRM 215


>sp|Y653_ATV|STRUCTURAL protein ORF653|Acidianus two-tailed virus (ATV)

Query: 1 EHSRIPRSQI 10
EH+ IPR +
Sbjct: 464 EHTEIPRENM 473


>sp|CAPSD_CMVKO|CAPSID protein|Cucumber mosaic virus (strain Kor)

Query: 1 EHSRIPRSQI 10
EH RIP S +
Sbjct: 206 EHQRIPTSGV 215




9|Sequence|41|50|PRSQIQRARP

>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 1 PRSQIQRAR 9
PRS++QRAR
Sbjct: 1903 PRSEMQRAR 1911


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 1 PRSQIQRAR 9
P+S++QRAR
Sbjct: 1903 PKSELQRAR 1911


>sp|L_EBLV2|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 2 (strain

Query: 1 PRSQIQRAR 9
P+S++QRAR
Sbjct: 1903 PKSEMQRAR 1911


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 1 PRSQIQRAR 9
P+S++QRAR
Sbjct: 1904 PKSELQRAR 1912


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 1 PRSQIQRAR 9
P+S++QRAR
Sbjct: 1903 PKSEMQRAR 1911


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 1 PRSQIQRAR 9
P+S++QRAR
Sbjct: 1903 PKSEMQRAR 1911


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 1 PRSQIQRAR 9
P+S++QRAR
Sbjct: 1903 PKSEMQRAR 1911


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 1 PRSQIQRAR 9
P+S++QRAR
Sbjct: 1903 PKSEMQRAR 1911


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 1 PRSQIQRAR 9
P+S++QRAR
Sbjct: 1903 PKSEMQRAR 1911


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 1 PRSQIQRAR 9
P+S++QRAR
Sbjct: 1903 PKSEMQRAR 1911


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 1 PRSQIQRAR 9
P+S++QRAR
Sbjct: 1903 PKSEMQRAR 1911


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)

Query: 1 PRSQIQRAR 9
P+S++QRAR
Sbjct: 1904 PKSEMQRAR 1912


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 1 PRSQIQRAR 9
P+S++QRAR
Sbjct: 1903 PKSEMQRAR 1911


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1 PRSQIQRAR 9
P QIQRA+
Sbjct: 1477 PTKQIQRAK 1485


>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 RSQIQRARP 10
R+ +QRARP
Sbjct: 138 RAALQRARP 146


>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 RSQIQRARP 10
R+ +QRARP
Sbjct: 138 RAALQRARP 146


>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 RSQIQRARP 10
R+ +QRARP
Sbjct: 138 RAALQRARP 146


>sp|POLS_SAV3|STRUCTURAL polyprotein|Alphavirus salmon subtype 3 (SAV3)

Query: 1 PRSQIQRARP 10
PR Q+Q RP
Sbjct: 22 PRGQVQPYRP 31


>sp|LT_POVMC|LARGE T antigen|Murine polyomavirus (strain Crawford small-plaque)

Query: 1 PRSQIQRARP 10
PR+ + R RP
Sbjct: 180 PRTPVSRKRP 189




10|Sequence|46|55|QRARPVKMAT

***** No hits found ******


11|Sequence|51|60|VKMATLLVTY

***** No hits found ******


12|Sequence|56|65|LLVTYYGEEY

>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 2 LVTYYGEE 9
LV+YYG+E
Sbjct: 406 LVSYYGQE 413


>sp|VEGFH_ORFN7|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ7) (OV

Query: 3 VTYYGEEY 10
V Y GEEY
Sbjct: 52 VVYLGEEY 59


>sp|RDRP_REOVJ|RNA-DIRECTED RNA polymerase lambda-3|Reovirus type 2 (strain D5/Jones)

Query: 2 LVTYYGEEY 10
L++ YGEE+
Sbjct: 759 LISAYGEEF 767


>sp|RDRP_REOVD|RNA-DIRECTED RNA polymerase lambda-3|Reovirus type 3 (strain Dearing)

Query: 2 LVTYYGEEY 10
L++ YGEE+
Sbjct: 759 LISKYGEEF 767


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 LLVTYYGEE 9
LL T+YG+E
Sbjct: 314 LLYTFYGKE 322


>sp|RDRP_REOVL|RNA-DIRECTED RNA polymerase lambda-3|Reovirus type 1 (strain Lang)

Query: 2 LVTYYGEEY 10
L++ YGEE+
Sbjct: 759 LISKYGEEF 767


>sp|105R_ADES1|PROTEIN 105R|Snake adenovirus serotype 1 (SnAdV-1)

Query: 3 VTYYGEE 9
V++YGEE
Sbjct: 31 VSFYGEE 37


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related

Query: 1 LLVTYYGEE 9
LL T+YG+E
Sbjct: 314 LLYTFYGKE 322


>sp|GL_PSHV1|ENVELOPE glycoprotein L|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 VTYYGEEY 10
VT YG EY
Sbjct: 83 VTLYGPEY 90


>sp|VF349_IIV3|PUTATIVE transcription elongation factor S-II-like|Invertebrate iridescent

Query: 2 LVTYYGEE 9
L TY+G+E
Sbjct: 10 LATYFGDE 17


>sp|A154_SSV1|UNCHARACTERIZED protein A-154|Sulfolobus spindle-shape virus 1 (SSV1)

Query: 2 LVTYYGEE 9
L TY+GEE
Sbjct: 85 LPTYFGEE 92


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 LLVTYYGEE 9
LL T+YG+E
Sbjct: 315 LLHTFYGKE 323


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 LLVTYYGEE 9
LL T+YG+E
Sbjct: 315 LLHTFYGKE 323




13|Sequence|61|70|YGEEYAVQLT

>sp|YR800_MIMIV|UNCHARACTERIZED protein R800|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GEEYAVQLT 10
G+ YAVQ+T
Sbjct: 27 GDHYAVQVT 35


>sp|VE4_HPV58|PROTEIN E4|Human papillomavirus 58

Query: 3 EEYAVQLT 10
E+Y VQLT
Sbjct: 63 EDYTVQLT 70




14|Sequence|66|75|AVQLTLQVLR

***** No hits found ******


15|Sequence|71|80|LQVLRAINQR

>sp|SPIKE_BRV1|SPIKE glycoprotein|Breda virus 1 (BRV-1)

Query: 1 LQVLRAINQR 10
LQVLR+ +QR
Sbjct: 40 LQVLRSFSQR 49




16|Sequence|76|85|AINQRLLAEE

>sp|AC4_ICMV|PROTEIN AC4|Indian cassava mosaic virus (ICMV)

Query: 1 AINQRLL 7
A+NQRLL
Sbjct: 91 AVNQRLL 97




17|Sequence|81|90|LLAEELHRAA

>sp|VG61_BPMD2|GENE 61 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 LAEELHRA 9
LA+ELHR+
Sbjct: 22 LADELHRS 29




18|Sequence|86|95|LHRAAIQEYS

>sp|CAPSD_BOTVX|CAPSID protein|Botrytis virus X (isolate Botrytis

Query: 1 LHRAAIQEYS 10
H+AAIQEY+
Sbjct: 97 FHQAAIQEYA 106


>sp|TERL_BPT4|TERMINASE, large subunit|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 HRAAIQEY 9
HRA IQE+
Sbjct: 516 HRATIQEF 523


>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate

Query: 1 LHRAAIQEYS 10
LHR I EYS
Sbjct: 1917 LHRTLIFEYS 1926


>sp|YL082_MIMIV|UNCHARACTERIZED protein L82|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 HRAAIQEY 9
H+AA++EY
Sbjct: 30 HQAAVEEY 37


>sp|MCP_EHV2|MAJOR capsid protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 HRAAIQEY 9
HRA I EY
Sbjct: 1339 HRALIDEY 1346




19|Sequence|91|100|IQEYSTQENG

>sp|VP75_SHV21|PROBABLE membrane antigen 75|Saimiriine herpesvirus 2 (strain 11)

Query: 2 QEYSTQENG 10
QEY Q+NG
Sbjct: 1209 QEYIMQQNG 1217


>sp|CAP8_ADECU|PRE-HEXON-LINKING protein VIII|Canine adenovirus serotype 1 (strain

Query: 2 QEYSTQEN 9
Q+YSTQ N
Sbjct: 25 QDYSTQMN 32


>sp|CAP8_ADECT|PRE-HEXON-LINKING protein VIII|Canine adenovirus serotype 2 (strain

Query: 2 QEYSTQEN 9
Q+YSTQ N
Sbjct: 25 QDYSTQMN 32


>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human

Query: 2 QEYSTQENG 10
Q+Y+ ENG
Sbjct: 597 QDYTLHENG 605




20|Sequence|96|105|TQENGTDDSA

>sp|RDRP_GVAIS|RNA replication protein|Grapevine virus A (isolate Is

Query: 1 TQENGTDDS 9
TQE G DDS
Sbjct: 637 TQELGLDDS 645




21|Sequence|101|110|TDDSAASSSL

>sp|SIGNS_REOVD|PROTEIN sigma-NS|Reovirus type 3 (strain Dearing)

Query: 1 TDDSAASSSL 10
+DDS A+SSL
Sbjct: 331 SDDSVATSSL 340




22|Sequence|106|115|ASSSLGENKP

>sp|DPOL_POV01|DNA polymerase|Pyramimonas orientalis virus (PoV01)

Query: 1 ASSSLGEN 8
ASS+LGEN
Sbjct: 473 ASSALGEN 480


>sp|RIR1_MUHVS|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Murid herpesvirus 1 (strain

Query: 3 SSLGENKP 10
S LGEN+P
Sbjct: 1055 SCLGENRP 1062




23|Sequence|111|120|GENKPRSLKT

>sp|RDRP_CPVKS|RNA-DIRECTED RNA polymerase|Cryptosporidium parvum virus 1 (strain

Query: 1 GENKPR 6
GENKPR
Sbjct: 161 GENKPR 166




24|Sequence|116|125|RSLKTPDHPE

>sp|RPB2_FRG3G|PUTATIVE DNA-directed RNA polymerase II|Frog virus 3 (isolate Goorha)

Query: 3 LKTPDHPE 10
L+TP HPE
Sbjct: 979 LRTPRHPE 986


>sp|VG10_ALHV1|UNCHARACTERIZED gene 10 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 RSLKTPDH 8
++L+TPDH
Sbjct: 152 KALETPDH 159


>sp|VG430_BPPF1|UNCHARACTERIZED protein ORF430|Pseudomonas phage Pf1 (Bacteriophage Pf1)

Query: 3 LKTPDHP 9
+KTP HP
Sbjct: 1 MKTPIHP 7


>sp|CAPSD_TGMVY|CAPSID protein|Tomato golden mosaic virus (strain

Query: 1 RSLKTPDHPE 10
RSL+ PD P+
Sbjct: 48 RSLRGPDVPK 57


>sp|VASH_BPP4|PROTEIN ash|Enterobacteria phage P4 (Bacteriophage P4)

Query: 5 TPDHPE 10
TP HPE
Sbjct: 79 TPSHPE 84


>sp|GG_HHV11|ENVELOPE glycoprotein G|Human herpesvirus 1 (strain 17)

Query: 2 SLKTPDH 8
SL TPDH
Sbjct: 63 SLTTPDH 69


>sp|CAPSH_ASFM2|HEXON protein p72|African swine fever virus (isolate

Query: 2 SLKTPDHP 9
S+KTPD P
Sbjct: 570 SIKTPDDP 577


>sp|CAPSH_ASFK5|MAJOR capsid protein|African swine fever virus (isolate

Query: 2 SLKTPDHP 9
S+KTPD P
Sbjct: 570 SIKTPDDP 577




25|Sequence|121|130|PDHPEGNEGN

>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 1 PDHPEG 6
PDHP G
Sbjct: 80 PDHPSG 85


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1 PDHPEG 6
PDHP G
Sbjct: 80 PDHPSG 85


>sp|ENV_FLVC6|ENVELOPE glycoprotein|Feline leukemia virus (isolate CFE-6)

Query: 1 PDHPEGNEG 9
P HP+GN G
Sbjct: 270 PHHPQGNGG 278


>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 PDHPEGNEG 9
PD PE EG
Sbjct: 706 PDRPEETEG 714


>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 PDHPEGNE 8
PD PEG E
Sbjct: 738 PDRPEGIE 745


>sp|U1141_GAHVG|UNCHARACTERIZED protein US1141|Gallid herpesvirus 2 (strain GA)

Query: 3 HPEGNE 8
HP+GNE
Sbjct: 49 HPKGNE 54


>sp|GD_GAHVM|ENVELOPE glycoprotein D|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 3 HPEGNE 8
HP+GNE
Sbjct: 49 HPKGNE 54


>sp|VGE2_EHV2|UNCHARACTERIZED gene E2 protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 DHPEGNEGN 10
D PEG EG+
Sbjct: 261 DFPEGEEGS 269


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 2 DHPEGNEGN 10
D+PEG G+
Sbjct: 1632 DYPEGTSGS 1640


>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus

Query: 2 DHPEGN 7
DHP GN
Sbjct: 2050 DHPSGN 2055


Query: 3 HPEGNEG 9
HP GN G
Sbjct: 1933 HPTGNPG 1939


>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 DHPEGNEGN 10
+H EG +GN
Sbjct: 400 NHTEGTKGN 408


>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12

Query: 2 DHPEGNEG 9
D PEGN+G
Sbjct: 410 DLPEGNDG 417


>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)

Query: 3 HPEGNE 8
HPE NE
Sbjct: 614 HPENNE 619


>sp|YL205_MIMIV|PUTATIVE serine/threonine-protein kinase L205|Acanthamoeba polyphaga

Query: 1 PDHPEGNE 8
PD P+ NE
Sbjct: 282 PDDPDNNE 289




26|Sequence|126|135|GNEGNGPRPY

>sp|DPOL2_BPK32|DEPOLYMERASE 2, capsule K21-specific|Klebsiella phage KP32 (Bacteriophage

Query: 3 EGNGPRPY 10
EGNG RPY
Sbjct: 61 EGNGGRPY 68


>sp|NCAP_CPXVB|NUCLEOPROTEIN mammarenavirus (isolate Rat/Brasil/BeAn 119303/1970)

Query: 1 GNEG-NGPRPY 10
G+ G +GPRPY
Sbjct: 114 GDSGRDGPRPY 124


>sp|RPB1_FRG3G|PUTATIVE DNA-directed RNA polymerase 008R|Frog virus 3 (isolate Goorha)

Query: 1 GNEGNGPRPY 10
G GN PRP+
Sbjct: 103 GTVGNEPRPF 112


>sp|YR366_MIMIV|PUTATIVE ATP-dependent RNA helicase R366|Acanthamoeba polyphaga mimivirus

Query: 5 NGPRPY 10
N PRPY
Sbjct: 1157 NNPRPY 1162


>sp|VEF_GVHA|VIRAL-ENHANCING factor|Heliothis armigera granulosis virus (HaGV)

Query: 1 GNEGNGPRPY 10
GN NGP Y
Sbjct: 771 GNHHNGPHSY 780


>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 5 NGPRPY 10
NGP PY
Sbjct: 236 NGPMPY 241


>sp|PG056_VACCW|PROTEIN OPG056|Vaccinia virus (strain Western Reserve)

Query: 5 NGPRPY 10
NGP PY
Sbjct: 236 NGPMPY 241


>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)

Query: 5 NGPRPY 10
NGP PY
Sbjct: 236 NGPMPY 241


>sp|PG056_CAMPM|PROTEIN OPG056|Camelpox virus (strain M-96)

Query: 5 NGPRPY 10
NGP PY
Sbjct: 236 NGPMPY 241


>sp|VP25_BPAPS|PUTATIVE protein p25|Acyrthosiphon pisum secondary endosymbiont phage

Query: 3 EGNGPRP 9
+G+GP+P
Sbjct: 48 QGDGPKP 54


>sp|CAPSD_BPPHM|CAPSID protein VP1|Bdellovibrio phage phiMH2K (Bacteriophage phiMH2K)

Query: 2 NEGNGPRPY 10
N GNGP P+
Sbjct: 220 NAGNGPYPH 228


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 3 EGNGPRPY 10
+GN P+PY
Sbjct: 145 KGNIPQPY 152


>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 GNEGNGPRPY 10
GN+G P PY
Sbjct: 92 GNDGLPPPPY 101


>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 1 GNEGNGPRP 9
GN G GP P
Sbjct: 565 GNLGEGPAP 573


>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 GNEGNGPRPY 10
GN+G P PY
Sbjct: 92 GNDGLPPPPY 101


>sp|HEPA_BHV1C|DNA helicase/primase complex-associated protein|Bovine herpesvirus 1.1

Query: 5 NGPRPY 10
+GPRPY
Sbjct: 666 HGPRPY 671


>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4 GNGPRP 9
G GPRP
Sbjct: 207 GGGPRP 212


>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 GNEGNGPRPY 10
GN+G P PY
Sbjct: 92 GNDGLPPPPY 101


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 2 NEGNGPRPY 10
N+GN P Y
Sbjct: 3644 NQGNNPSHY 3652


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 2 NEGNGPRPY 10
N+GN P Y
Sbjct: 3644 NQGNNPSHY 3652


>sp|Y12E_BPT4|UNCHARACTERIZED 10.8 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 NEGNGPRPY 10
NEGN R Y
Sbjct: 10 NEGNTTRDY 18


>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12

Query: 3 EGNGPRPY 10
EG PRP+
Sbjct: 49 EGQNPRPF 56


>sp|PRO_JSRV|GAG-PRO polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 1 GNEGNGPRP 9
GN G GP P
Sbjct: 565 GNLGEGPAP 573


>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)

Query: 2 NEGNGPRP 9
++GNGP P
Sbjct: 504 SKGNGPVP 511


>sp|TERL_BPSF5|PUTATIVE terminase large subunit|Shigella phage SfV (Shigella flexneri

Query: 1 GNEGNGPRPY 10
GN G+G P+
Sbjct: 197 GNPGDGSSPH 206


>sp|SCAF_ALHV1|CAPSID scaffolding protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 6 GPRPY 10
GPRPY
Sbjct: 339 GPRPY 343




27|Sequence|131|140|GPRPYGGGAA

>sp|NCAP_CPXVB|NUCLEOPROTEIN mammarenavirus (isolate Rat/Brasil/BeAn 119303/1970)

Query: 1 GPRPYGG 7
GPRPY G
Sbjct: 120 GPRPYMG 126


>sp|DPOL_BPMD2|DNA polymerase|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 PRPYGGGA 9
PRP+G G
Sbjct: 132 PRPFGAGG 139


Query: 3 RPYGGGA 9
R YGGGA
Sbjct: 453 RVYGGGA 459


>sp|MCE_WTV|PUTATIVE mRNA-capping enzyme P5|Wound tumor virus (WTV)

Query: 2 PRPYGG 7
P+PYGG
Sbjct: 415 PQPYGG 420


>sp|MCE_RGDV|PUTATIVE mRNA-capping enzyme P5|Rice gall dwarf virus (RGDV)

Query: 2 PRPYGG 7
P+PYGG
Sbjct: 411 PQPYGG 416


>sp|293R_IIV6|UNCHARACTERIZED protein 293R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 GPRPY 5
GPRPY
Sbjct: 55 GPRPY 59


>sp|NPH2_RFVKA|RNA helicase NPH-II|Rabbit fibroma virus (strain Kasza)

Query: 2 PRPYGG 7
P PYGG
Sbjct: 478 PSPYGG 483


>sp|NPH2_MYXVL|RNA helicase NPH-II|Myxoma virus (strain Lausanne) (MYXV)

Query: 2 PRPYGG 7
P PYGG
Sbjct: 478 PSPYGG 483


>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)

Query: 2 PRPYGGG 8
P PYG G
Sbjct: 608 PSPYGNG 614


>sp|GQ2_HHV6Z|GLYCOPROTEIN Q2|Human herpesvirus 6B (strain Z29)

Query: 2 PRPYGGG 8
P PYG G
Sbjct: 174 PSPYGNG 180


>sp|NPH2_FOWPN|RNA helicase NPH-II|Fowlpox virus (strain NVSL) (FPV)

Query: 2 PRPYGG 7
P+P+GG
Sbjct: 483 PKPFGG 488


>sp|TSP_BPSP1|TAIL sheath protein|Bacillus phage SP01 (Bacteriophage SP01)

Query: 2 PRPYGGGAA 10
P P GGG A
Sbjct: 82 PSPEGGGGA 90


>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 PRPYGGGAA 10
PRP G G A
Sbjct: 163 PRPPGSGLA 171


>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 PRPYGGGAA 10
PRP G G A
Sbjct: 163 PRPPGSGLA 171


>sp|GH_SHV21|ENVELOPE glycoprotein H|Saimiriine herpesvirus 2 (strain 11)

Query: 3 RPYGGGAA 10
+PY GG+A
Sbjct: 597 KPYQGGSA 604


>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7

Query: 2 PRPYGGGAA 10
P P GGG A
Sbjct: 70 PGPSGGGVA 78


>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)

Query: 2 PRPYGGG 8
P P+GGG
Sbjct: 113 PGPFGGG 119


>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)

Query: 4 PYGGGAA 10
PYGGG A
Sbjct: 116 PYGGGHA 122


>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate

Query: 2 PRPYGGG 8
P P+GGG
Sbjct: 113 PGPFGGG 119


>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)

Query: 4 PYGGG 8
PYGGG
Sbjct: 114 PYGGG 118


>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus

Query: 2 PRPYGGG 8
P P+GGG
Sbjct: 113 PGPFGGG 119


>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 GPRPYGGG 8
GPRP G G
Sbjct: 247 GPRPGGAG 254


>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 GPRPYGGG 8
GPRP G G
Sbjct: 247 GPRPGGAG 254


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2 PRPYGGGA 9
PRP GG A
Sbjct: 1444 PRPVGGPA 1451


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2 PRPYGGGA 9
PRP GG A
Sbjct: 1444 PRPVGGPA 1451




28|Sequence|136|145|GGGAASLRCS

>sp|AC54_NPVAC|PROTEIN AC54|Autographa californica nuclear polyhedrosis virus

Query: 1 GGGAASLR 8
GGG+ASLR
Sbjct: 320 GGGSASLR 327


>sp|YL672_MIMIV|UNCHARACTERIZED protein L672|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GGAASLRCS 10
GG+A+ RCS
Sbjct: 31 GGSATYRCS 39


>sp|POL1_APMV|RNA1 polyprotein|Andean potato mottle virus (APMV)

Query: 2 GGAASLRCS 10
GGA L CS
Sbjct: 394 GGATPLECS 402


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2 GGAASLRC 9
GGA++L C
Sbjct: 17 GGASALEC 24


>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 GGGAASLRC 9
GGGA L C
Sbjct: 62 GGGANRLMC 70


>sp|VG52_EHV2|GENE 52 protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 GGGAASLRC 9
GGG S RC
Sbjct: 4 GGGGGSKRC 12




29|Sequence|141|150|SLRCSQPEAG

>sp|HELI_GAHVM|DNA replication helicase|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 3 RCSQPEAG 10
RC++PE G
Sbjct: 323 RCTEPEFG 330


>sp|L_BCNVU|RNA-DIRECTED RNA polymerase L|Bear Canyon mammarenavirus (isolate Mouse/United

Query: 3 RCSQPEAG 10
+C QPE G
Sbjct: 466 KCGQPEFG 473


>sp|HELI_SHV21|DNA replication helicase|Saimiriine herpesvirus 2 (strain 11)

Query: 3 RCSQPEAG 10
RC+ PE G
Sbjct: 287 RCTDPEFG 294


>sp|HELI_EHV2|DNA replication helicase|Equine herpesvirus 2 (strain 86/87)

Query: 3 RCSQPEAG 10
RC+ PE G
Sbjct: 288 RCTDPEFG 295


>sp|VF205_IIV3|PUTATIVE DNA ligase 052L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 SLRCSQPEA 9
++ CS+PEA
Sbjct: 523 NIDCSKPEA 531


>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)

Query: 2 LRCSQPEA 9
LRC PEA
Sbjct: 531 LRCRDPEA 538


>sp|HELI_ALHV1|DNA replication helicase|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 RCSQPEAG 10
RC+ PE G
Sbjct: 290 RCTDPEFG 297




30|Sequence|146|155|QPEAGRGLSR

>sp|CAPSP_BPT4|CAPSID vertex protein|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 PEAGRGLSR 10
PEAGR L R
Sbjct: 244 PEAGRSLYR 252


>sp|CAPSP_BPAR1|CAPSID vertex protein|Escherichia phage AR1 (Bacteriophage AR1)

Query: 2 PEAGRGLSR 10
PEAGR L R
Sbjct: 244 PEAGRSLYR 252


>sp|PRIM_EHV1V|DNA primase|Equine herpesvirus 1 (strain V592)

Query: 2 PEAGRGLSR 10
PEA RGL+R
Sbjct: 814 PEALRGLAR 822


>sp|PRIM_EHV1B|DNA primase|Equine herpesvirus 1 (strain Ab4p)

Query: 2 PEAGRGLSR 10
PEA RGL+R
Sbjct: 814 PEALRGLAR 822


>sp|RDRP_HV19S|PROBABLE RNA-directed RNA polymerase|Helminthosporium victoriae virus-190S

Query: 1 QPEAGRGLS 9
QPE +GLS
Sbjct: 211 QPENAKGLS 219


>sp|GP30_BPSP1|GENE 30 protein|Bacillus phage SP01 (Bacteriophage SP01)

Query: 1 QPEAGRGLS 9
QPE G G++
Sbjct: 65 QPEKGEGMA 73


>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)

Query: 1 QPEAGRGLS 9
QPE G GL
Sbjct: 110 QPEMGMGLC 118




31|Sequence|151|160|RGLSRKPLSK

>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 RGLSRKPL 8
RGLS KPL
Sbjct: 51 RGLSLKPL 58


>sp|POL2_BRSV|RNA2 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 1 RGLSRKPLS 9
RGL+ +PLS
Sbjct: 1002 RGLAEQPLS 1010


>sp|YOR1_COYMV|UNCHARACTERIZED 23 kDa protein|Commelina yellow mottle virus (CoYMV)

Query: 3 LSRKPLSK 10
LSR+PLSK
Sbjct: 145 LSRRPLSK 152




32|Sequence|156|165|KPLSKRREKA

***** No hits found ******


33|Sequence|161|170|RREKASEGLD

>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P

Query: 1 RREKASEGLD 10
RRE+ EG D
Sbjct: 43 RRERMPEGFD 52


>sp|RDRP_LDCPR|RNA-DIRECTED RNA polymerase VP2|Lymantria dispar cypovirus 1 (isolate

Query: 1 RREKASEGLD 10
RR++A GLD
Sbjct: 484 RRQRAISGLD 493




34|Sequence|166|175|SEGLDAQGKP

>sp|Y069_OSHVF|UNCHARACTERIZED protein ORF69|Ostreid herpesvirus 1 (isolate France)

Query: 1 SEGLDAQGKP 10
SEG+D G P
Sbjct: 66 SEGVDTNGDP 75


>sp|KTHY_CAMPS|THYMIDYLATE kinase|Camelpox virus (strain CMS)

Query: 2 EGLDAQGK 9
EGLD GK
Sbjct: 10 EGLDKSGK 17


>sp|KTHY_CAMPM|THYMIDYLATE kinase|Camelpox virus (strain M-96)

Query: 2 EGLDAQGK 9
EGLD GK
Sbjct: 10 EGLDKSGK 17


>sp|YR458_MIMIV|PUTATIVE ATP-dependent RNA helicase R458|Acanthamoeba polyphaga mimivirus

Query: 1 SEGLDAQG 8
S GLD QG
Sbjct: 446 SRGLDVQG 453


>sp|KTHY_VARV|THYMIDYLATE kinase|Variola virus

Query: 2 EGLDAQGK 9
EGLD GK
Sbjct: 10 EGLDKSGK 17


>sp|KTHY_VAR67|THYMIDYLATE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 EGLDAQGK 9
EGLD GK
Sbjct: 10 EGLDKSGK 17


>sp|KTHY_VACCW|THYMIDYLATE kinase|Vaccinia virus (strain Western Reserve)

Query: 2 EGLDAQGK 9
EGLD GK
Sbjct: 10 EGLDKSGK 17


>sp|KTHY_VACCT|THYMIDYLATE kinase|Vaccinia virus (strain Tian Tan)

Query: 2 EGLDAQGK 9
EGLD GK
Sbjct: 10 EGLDKSGK 17


>sp|KTHY_VACCC|THYMIDYLATE kinase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 EGLDAQGK 9
EGLD GK
Sbjct: 10 EGLDKSGK 17


>sp|KTHY_VACCA|THYMIDYLATE kinase|Vaccinia virus (strain Ankara) (VACV)

Query: 2 EGLDAQGK 9
EGLD GK
Sbjct: 10 EGLDKSGK 17


>sp|KTHY_RABPU|THYMIDYLATE kinase|Rabbitpox virus (strain Utrecht) (RPV)

Query: 2 EGLDAQGK 9
EGLD GK
Sbjct: 10 EGLDKSGK 17


>sp|KTHY_MONPV|THYMIDYLATE kinase|Monkeypox virus (MPXV)

Query: 2 EGLDAQGK 9
EGLD GK
Sbjct: 10 EGLDKSGK 17


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 3 GLDAQGK 9
G+D+QGK
Sbjct: 2763 GMDSQGK 2769


>sp|KTHY_CWPXB|THYMIDYLATE kinase|Cowpox virus (strain Brighton Red)

Query: 2 EGLDAQGK 9
EGLD GK
Sbjct: 10 EGLDKSGK 17


>sp|KTHY_CWPXG|THYMIDYLATE kinase|Cowpox virus (strain GRI-90 /

Query: 2 EGLDAQGK 9
EGLD GK
Sbjct: 10 EGLDKSGK 17


>sp|ENLYS_BPK32|ENDOLYSIN phage KP32 (Bacteriophage KP32)

Query: 3 GLDAQGKP 10
G+DA+G P
Sbjct: 85 GIDAKGNP 92


>sp|KTHY_ECTVM|THYMIDYLATE kinase|Ectromelia virus (strain Moscow) (ECTV)

Query: 2 EGLDAQGK 9
EGLD GK
Sbjct: 10 EGLDKSGK 17


>sp|ENLYS_BPK11|ENDOLYSIN phage K11 (Bacteriophage K11)

Query: 3 GLDAQGKP 10
G+DA+G P
Sbjct: 85 GIDAKGNP 92


>sp|LHDAG_HDVL1|LARGE delta antigen|Hepatitis delta virus genotype I

Query: 2 EGLDAQG 8
EGLDA+G
Sbjct: 184 EGLDARG 190




35|Sequence|171|180|AQGKPRTRSP

>sp|VPHE_NPVAC|POLYHEDRAL envelope-associated phosphoprotein|Autographa californica nuclear

Query: 4 KPRTRSP 10
+PR+RSP
Sbjct: 118 RPRSRSP 124


>sp|POLG_PEV9U|GENOME polyprotein|Porcine enterovirus 9 (strain UKG/410/73)

Query: 1 AQGKPRTRSP 10
AQG P T +P
Sbjct: 314 AQGIPTTNTP 323


>sp|POLS_SAV1|STRUCTURAL polyprotein|Alphavirus salmon subtype 1 (SAV1)

Query: 2 QGKPRTRS 9
QGKP RS
Sbjct: 601 QGKPHLRS 608


>sp|POLS_SAV3|STRUCTURAL polyprotein|Alphavirus salmon subtype 3 (SAV3)

Query: 2 QGKPRTRS 9
QGKP RS
Sbjct: 600 QGKPHLRS 607


>sp|POLS_SAV2|STRUCTURAL polyprotein|Alphavirus salmon subtype 2 (SAV2)

Query: 2 QGKPRTRS 9
QGKP RS
Sbjct: 602 QGKPHLRS 609




36|Sequence|176|185|RTRSPALPGG

>sp|NEC1_EHV2|NUCLEAR egress protein 1|Equine herpesvirus 2 (strain 86/87)

Query: 1 RTRSPALPG 9
+TR PA PG
Sbjct: 8 KTREPASPG 16


>sp|IR09_HCMVA|UNCHARACTERIZED protein IRL9|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 RSPALPGG 10
R+PA+PGG
Sbjct: 60 RAPAIPGG 67


>sp|GLYCO_TUPVT|GLYCOPROTEIN virus (isolate Tupaia/Thailand/-/1986) (TUPV)

Query: 4 SPALPGG 10
SP+ PGG
Sbjct: 163 SPSFPGG 169


>sp|Y028_NPVOP|UNCHARACTERIZED 16.5 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 RTRSPALPG 9
R RSP+LP
Sbjct: 74 RRRSPSLPA 82




37|Sequence|181|190|ALPGGRSPGP

>sp|ENV_SIVV1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet

Query: 5 GRSPGP 10
GRSPGP
Sbjct: 432 GRSPGP 437


>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 LPGGRSPGP 10
LP G +PGP
Sbjct: 561 LPDGLAPGP 569


>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 LPGGRSPGP 10
LP G +PGP
Sbjct: 561 LPDGLAPGP 569


>sp|HEMA_CDVC|HEMAGGLUTININ glycoprotein|Canine distemper virus (strain Convac

Query: 1 ALPGGRS 7
ALPGGRS
Sbjct: 174 ALPGGRS 180


>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)

Query: 4 GGRSPGP 10
GGRSP P
Sbjct: 310 GGRSPRP 316


>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)

Query: 4 GGRSPGP 10
GGRSP P
Sbjct: 310 GGRSPRP 316


>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)

Query: 4 GGRSPGP 10
GGRSP P
Sbjct: 312 GGRSPRP 318


>sp|NCTSP_BPN4|NON-CONTRACTILE tail sheath|Enterobacteria phage N4 (Bacteriophage N4)

Query: 1 ALPGGRSPGP 10
A PG R+P P
Sbjct: 558 AYPGDRNPAP 567


>sp|RDRP_PMTVS|REPLICASE large subunit|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 3 PGGRSPGP 10
PGGR+ P
Sbjct: 1248 PGGRNSSP 1255


>sp|PORTL_BPKVM|PORTAL protein|Vibrio phage KVP40 (isolate Vibrio

Query: 2 LPGGRSPG 9
LPGG+S G
Sbjct: 339 LPGGQSLG 346


>sp|DNBI_SUHV|MAJOR DNA-binding protein|Suid herpesvirus 1 (SuHV-1) (Pseudorabies

Query: 3 PGGRSPGP 10
PGG+SP P
Sbjct: 815 PGGQSPNP 822


>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 3 PGGRSPGP 10
P G SPGP
Sbjct: 444 PPGSSPGP 451


>sp|CAPSD_MSVTA|CAPSID protein|Maize streak virus genotype B

Query: 3 PGGRSPGP 10
PGG++P P
Sbjct: 117 PGGQAPTP 124


>sp|CAPSD_MSVN|CAPSID protein|Maize streak virus genotype A

Query: 3 PGGRSPGP 10
PGG++P P
Sbjct: 117 PGGQAPTP 124


>sp|VF213_IIV6|TRANSMEMBRANE protein 213R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 LPGGRSP 8
LPGGR+P
Sbjct: 123 LPGGRAP 129


>sp|CAPSD_MSVS|CAPSID protein|Maize streak virus genotype A

Query: 3 PGGRSPGP 10
PGG++P P
Sbjct: 117 PGGQAPTP 124


>sp|CAPSD_MSVK|CAPSID protein|Maize streak virus genotype A

Query: 3 PGGRSPGP 10
PGG++P P
Sbjct: 117 PGGQAPTP 124




38|Sequence|186|195|RSPGPCRALE

>sp|ENV_SIVV1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet

Query: 1 RSPGPC 6
RSPGPC
Sbjct: 433 RSPGPC 438


>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)

Query: 3 PGPCRAL 9
PGP RAL
Sbjct: 239 PGPLRAL 245


>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)

Query: 3 PGPCRAL 9
PGP RAL
Sbjct: 239 PGPLRAL 245


>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann

Query: 3 PGPCRAL 9
PGP RAL
Sbjct: 239 PGPLRAL 245


>sp|VF205_IIV3|PUTATIVE DNA ligase 052L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 RSPGPC 6
RSP PC
Sbjct: 742 RSPSPC 747


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1 RSPGPCRALE 10
+SPG C A++
Sbjct: 956 KSPGNCSAID 965


>sp|ENV_SIVVG|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet

Query: 1 RSPGPC 6
++PGPC
Sbjct: 438 KAPGPC 443


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1 RSPGPCRALE 10
+SPG C A++
Sbjct: 956 KSPGNCSAID 965


>sp|REV_HV2KR|PROTEIN Rev|Human immunodeficiency virus type 2

Query: 2 SPGPCRALE 10
+PGPC+ E
Sbjct: 123 APGPCKDYE 131


>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)

Query: 2 SPGPCRALE 10
+PG CRA E
Sbjct: 377 APGACRATE 385


>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 4 GPCRALE 10
GPCR E
Sbjct: 1637 GPCRLFE 1643




39|Sequence|191|200|CRALEGGQAE

>sp|CP_CSVMV|PUTATIVE Polyprotein CP|Cassava vein mosaic virus (CsVMV)

Query: 2 RALEGGQAE 10
R LEGG+AE
Sbjct: 1310 RLLEGGKAE 1318


>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 CRALEGGQ 8
CRALE G+
Sbjct: 592 CRALENGK 599


>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 CRALEGGQ 8
CRALE G+
Sbjct: 592 CRALENGK 599


>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 CRALEGGQ 8
CRALE G+
Sbjct: 592 CRALENGK 599




40|Sequence|196|205|GGQAEVRLRR

>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus

Query: 1 GGQAEVRLR 9
GG AE R+R
Sbjct: 774 GGDAEQRMR 782


>sp|MVP_BCMNN|P3N-PIPO polyprotein|Bean common mosaic necrosis virus

Query: 1 GGQAEVRLR 9
GG AE R+R
Sbjct: 774 GGDAEQRMR 782




41|Sequence|201|210|VRLRRNASSA

***** No hits found ******


42|Sequence|206|215|NASSAGRLQG

***** No hits found ******


43|Sequence|211|220|GRLQGLAGGA

>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 2 RLQGLAGGA 10
R +GL GGA
Sbjct: 31 RFKGLGGGA 39




44|Sequence|216|225|LAGGAPGQKE

>sp|VF369_IIV3|PROBABLE RAD2-like endonuclease 076L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 LAGGAPG 7
AGGAPG
Sbjct: 220 FAGGAPG 226


>sp|GN_EHV1V|ENVELOPE glycoprotein N|Equine herpesvirus 1 (strain V592)

Query: 2 AGGAPGQKE 10
AGG PG K+
Sbjct: 25 AGGDPGVKQ 33


>sp|GN_EHV1B|ENVELOPE glycoprotein N|Equine herpesvirus 1 (strain Ab4p)

Query: 2 AGGAPGQKE 10
AGG PG K+
Sbjct: 25 AGGDPGVKQ 33




45|Sequence|221|230|PGQKECRPFE

>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)

Query: 2 GQKECRPF 9
GQK CRPF
Sbjct: 498 GQKFCRPF 505


>sp|GQ2_HHV6Z|GLYCOPROTEIN Q2|Human herpesvirus 6B (strain Z29)

Query: 2 GQKECRPF 9
GQK CRPF
Sbjct: 64 GQKFCRPF 71


>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)

Query: 2 GQKECRPF 9
GQK CRP
Sbjct: 506 GQKFCRPL 513


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 3 QKECRPFE 10
K CRPFE
Sbjct: 1711 NKACRPFE 1718


>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 GQKECRPF 9
GQK CRP
Sbjct: 506 GQKFCRPL 513


>sp|G3P_BPM13|ATTACHMENT protein G3P|Enterobacteria phage M13 (Bacteriophage M13)

Query: 1 PGQKECRPF 9
P ECRPF
Sbjct: 367 PQSVECRPF 375


>sp|G3P_BPF1|ATTACHMENT protein G3P|Enterobacteria phage f1 (Bacteriophage f1)

Query: 1 PGQKECRPF 9
P ECRPF
Sbjct: 367 PQSVECRPF 375


>sp|ENV_EIAV2|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate

Query: 6 CRPFE 10
CRPFE
Sbjct: 129 CRPFE 133


>sp|GQ2_HHV6U|GLYCOPROTEIN Q2|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 GQKECRPF 9
GQK CRP
Sbjct: 64 GQKFCRPL 71


>sp|P4_RTBVP|PROTEIN P4|Rice tungro bacilliform virus (isolate

Query: 3 QKECRPF 9
QK+C PF
Sbjct: 161 QKDCEPF 167


>sp|HN_SENDH|HEMAGGLUTININ-NEURAMINIDASE virus (strain Harris) (SeV)

Query: 1 PGQKEC 6
PG KEC
Sbjct: 458 PGNKEC 463


>sp|HN_SENDZ|HEMAGGLUTININ-NEURAMINIDASE virus (strain Z) (SeV)

Query: 1 PGQKEC 6
PG KEC
Sbjct: 458 PGNKEC 463


>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 1 PGQKECRP 8
PG+ E RP
Sbjct: 729 PGENEVRP 736


>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)

Query: 2 GQKECRP 8
GQ++CRP
Sbjct: 359 GQRKCRP 365


>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 2 GQKECRP 8
GQ++CRP
Sbjct: 359 GQRKCRP 365


>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2 GQKECRP 8
GQ++CRP
Sbjct: 359 GQRKCRP 365


>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 1 PGQKECRP 8
PG+ E RP
Sbjct: 729 PGENEVRP 736


>sp|NEC2_GAHVM|NUCLEAR egress protein 2|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 5 ECRPFE 10
+CRPF+
Sbjct: 140 DCRPFQ 145


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 2 GQKECRPFE 10
G CRP+E
Sbjct: 966 GPMPCRPYE 974


>sp|YR106_MIMIV|UNCHARACTERIZED protein R106|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GQKECRPFE 10
G K C PFE
Sbjct: 309 GIKGCLPFE 317


>sp|POL_CAEVC|POL polyprotein|Caprine arthritis encephalitis virus (strain

Query: 1 PGQKECRPFE 10
PGQ +C P E
Sbjct: 726 PGQVKCIPIE 735


>sp|SHUT_GAHVM|VIRION host shutoff protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 PGQKECR 7
PG+K CR
Sbjct: 137 PGKKVCR 143


>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1 PGQKECRPF 9
PGQ +C F
Sbjct: 488 PGQSQCPRF 496


>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10

Query: 1 PGQKECRPFE 10
P Q +C P E
Sbjct: 207 PAQGDCPPLE 216


>sp|POLG_FMDVO|GENOME polyprotein|Foot-and-mouth disease virus serotype O

Query: 1 PGQKEC 6
PGQK C
Sbjct: 1555 PGQKAC 1560


>sp|G3P_BPFD|ATTACHMENT protein G3P|Enterobacteria phage fd (Bacteriophage fd)

Query: 1 PGQKECRPF 9
P ECRP+
Sbjct: 367 PQSVECRPY 375


>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 GQKECRPFE 10
G + CRPF+
Sbjct: 242 GLRACRPFD 250


>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 GQKECRPFE 10
G + CRPF+
Sbjct: 242 GLRACRPFD 250


>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30

Query: 1 PGQKECRPFE 10
P Q +C P E
Sbjct: 187 PAQGDCPPLE 196


>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus

Query: 1 PGQKECRPF 9
PGQ +C F
Sbjct: 488 PGQSQCPRF 496




46|Sequence|226|235|CRPFEVYLPS

>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus

Query: 1 CRPFEVYLPS 10
CR FEVYL +
Sbjct: 2300 CRLFEVYLTT 2309


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 1 CRPFEV 6
CRPFE+
Sbjct: 1714 CRPFEI 1719


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 1 CRPFEV 6
CRP+E+
Sbjct: 970 CRPYEI 975


>sp|Y286_ATV|UNCHARACTERIZED protein ORF286|Acidianus two-tailed virus (ATV)

Query: 3 PFEVYLP 9
P++VY+P
Sbjct: 24 PYDVYIP 30


>sp|YR811_MIMIV|PUTATIVE ariadne-like RING finger protein|Acanthamoeba polyphaga mimivirus

Query: 1 CRPFEVYLPS 10
CR F+VYLP+
Sbjct: 668 CR-FDVYLPN 676


>sp|POL_JEMBR|GAG-POL polyprotein|Jembrana disease virus (JDV)

Query: 3 PFEVYLPS 10
P+E+YL S
Sbjct: 1350 PYEIYLES 1357


>sp|POL_BIV29|GAG-POL polyprotein|Bovine immunodeficiency virus (strain R29)

Query: 3 PFEVYLPS 10
P+E+YL S
Sbjct: 1392 PYEIYLES 1399


>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)

Query: 1 CRPFEVYLP 9
C P + YLP
Sbjct: 23 CLPTDAYLP 31




47|Sequence|231|240|VYLPSGKMRP

>sp|NDD_BPR70|NUCLEOID disruption protein|Enterobacteria phage RB70 (Bacteriophage RB70)

Query: 2 YLPSGKMRP 10
YLP+ KM+P
Sbjct: 96 YLPASKMKP 104


>sp|NDD_BPR69|NUCLEOID disruption protein|Escherichia phage RB69 (Bacteriophage RB69)

Query: 2 YLPSGKMRP 10
YLP+ KM+P
Sbjct: 101 YLPASKMKP 109


>sp|NDD_BPT4|NUCLEOID disruption protein|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 YLPSGKMRP 10
YLP+ KM+P
Sbjct: 100 YLPASKMKP 108


>sp|NDD_BPT2|NUCLEOID disruption protein|Enterobacteria phage T2 (Bacteriophage T2)

Query: 2 YLPSGKMRP 10
YLP+ KM+P
Sbjct: 101 YLPASKMKP 109


>sp|NDD_BPR32|NUCLEOID disruption protein|Enterobacteria phage RB32 (Bacteriophage RB32)

Query: 2 YLPSGKMRP 10
YLP+ KM+P
Sbjct: 101 YLPASKMKP 109


>sp|NDD_BPK3|NUCLEOID disruption protein|Enterobacteria phage K3 (Bacteriophage K3)

Query: 2 YLPSGKMRP 10
YLP+ KM+P
Sbjct: 101 YLPASKMKP 109


>sp|NDD_BPT6|NUCLEOID disruption protein|Enterobacteria phage T6 (Bacteriophage T6)

Query: 2 YLPSGKMRP 10
YLP+ KM+P
Sbjct: 100 YLPASKMKP 108


>sp|FIB12_BPB03|PRE-NECK appendage protein|Bacillus phage B103 (Bacteriophage B103)

Query: 1 VYLPSGK 7
VY+P+GK
Sbjct: 133 VYIPNGK 139




48|Sequence|236|245|GKMRPRSLEV

>sp|POLG_CILVC|RNA replication protein|Citrus leprosis virus C (isolate

Query: 1 GKMRPRSLEV 10
G MRP S+EV
Sbjct: 445 GVMRPVSIEV 454




49|Sequence|241|250|RSLEVTISTG

***** No hits found ******


50|Sequence|246|255|TISTGEKAPA

>sp|TRX2_EHV1B|TRIPLEX capsid protein 2|Equine herpesvirus 1 (strain Ab4p)

Query: 1 TISTGEKAP 9
TIS GEKAP
Sbjct: 300 TISRGEKAP 308


>sp|EA31_LAMBD|PROTEIN ea31|Escherichia phage lambda (Bacteriophage lambda)

Query: 2 ISTGEKAP 9
+S+GEK P
Sbjct: 102 VSSGEKCP 109


>sp|COLL7_MIMIV|COLLAGEN-LIKE protein 7|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 TISTGEKAPA 10
TISTG +PA
Sbjct: 1706 TISTGSTSPA 1715




51|Sequence|251|260|EKAPANPEIL

>sp|POLN_DCVEB|REPLICASE polyprotein|Drosophila C virus (strain EB)

Query: 1 EKAPANPEIL 10
++ P NP+IL
Sbjct: 1731 QELPENPQIL 1740


>sp|REPA_MSVN|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype A

Query: 2 KAPANPEI 9
K P NPEI
Sbjct: 23 KCPENPEI 30


>sp|REPA_MSVS|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype A

Query: 2 KAPANPEI 9
K P NPEI
Sbjct: 23 KCPENPEI 30


>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60

Query: 2 KAPANPEIL 10
K P NP++L
Sbjct: 389 KVPLNPDVL 397




52|Sequence|256|265|NPEILLTLEE

>sp|POLG_BVY3|GENOME polyprotein|Blackberry virus Y (isolate Blackberry

Query: 2 PEILLTLE 9
PE LLTLE
Sbjct: 462 PEALLTLE 469


>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1

Query: 1 NPEILLTLE 9
NP ++ TLE
Sbjct: 75 NPAVMFTLE 83


>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971

Query: 1 NPEILLTLE 9
N E+L+TLE
Sbjct: 439 NAELLVTLE 447


>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 2 PEILLTLEE 10
P+ILL L+E
Sbjct: 778 PDILLALQE 786




53|Sequence|261|270|LTLEEKTAAN

>sp|PHOSP_TIBVC|PHOSPHOPROTEIN virus (strain CS132) (TIBV)

Query: 1 LTLEEKTAAN 10
L LEEKT+ N
Sbjct: 220 LDLEEKTSDN 229


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 1 LTLEEKTAAN 10
LTL E+T AN
Sbjct: 2375 LTLHEQTEAN 2384




54|Sequence|266|275|KTAANLDSAT

***** No hits found ******


55|Sequence|271|280|LDSATEPRAR

>sp|CAP9_ADET1|HEXON-INTERLACING protein IX|Tree shrew adenovirus serotype 1

Query: 2 DSATEPRAR 10
D+ATEP R
Sbjct: 55 DAATEPSTR 63




56|Sequence|276|285|EPRARPTPDG

>sp|MMP_SFAVA|PUTATIVE matrix metalloproteinase|Spodoptera frugiperda ascovirus 1a

Query: 2 PRARPTPDG 10
P RP+PDG
Sbjct: 247 PHRRPSPDG 255


>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5

Query: 1 EPRARPTPDG 10
EP +RP P G
Sbjct: 65 EPESRPGPSG 74


>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2

Query: 1 EPRARPTPDG 10
EP +RP P G
Sbjct: 64 EPESRPGPSG 73


>sp|NEF_HV1A2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 EPRARPTPDG 10
EPRA P DG
Sbjct: 24 EPRAEPAADG 33


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 EPRARPTPD 9
EPR P PD
Sbjct: 4763 EPRYLPYPD 4771


>sp|NEF_HV1BN|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 EPRARPTPDG 10
EPRA P DG
Sbjct: 32 EPRAEPAADG 41


>sp|TATR_NPVBM|TRANS-ACTIVATING transcriptional regulatory protein|Bombyx mori nuclear

Query: 6 PTPDG 10
PTPDG
Sbjct: 44 PTPDG 48


>sp|IE1_NPVAC|TRANS-ACTIVATING transcriptional regulatory protein|Autographa californica nuclear

Query: 6 PTPDG 10
PTPDG
Sbjct: 43 PTPDG 47


>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 PRARPTPD 9
PR R TPD
Sbjct: 910 PRLRMTPD 917


>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 PRARPTPD 9
PR R TPD
Sbjct: 910 PRLRMTPD 917




57|Sequence|281|290|PTPDGGASAD

>sp|TRM1_EHV2|TRIPARTITE terminase subunit 1|Equine herpesvirus 2 (strain 86/87)

Query: 3 PDGGASAD 10
PDGGAS D
Sbjct: 445 PDGGASCD 452


>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7

Query: 1 PTPDGGASAD 10
P P GG AD
Sbjct: 70 PGPSGGGVAD 79


>sp|RDRP_BOTVF|RNA replication protein|Botrytis virus F (isolate Botrytis

Query: 1 PTPDGGASA 9
P P GGASA
Sbjct: 974 PVPTGGASA 982


>sp|TATR_NPVBM|TRANS-ACTIVATING transcriptional regulatory protein|Bombyx mori nuclear

Query: 1 PTPDGG 6
PTPDG
Sbjct: 44 PTPDGA 49


>sp|IE1_NPVAC|TRANS-ACTIVATING transcriptional regulatory protein|Autographa californica nuclear

Query: 1 PTPDGG 6
PTPDG
Sbjct: 43 PTPDGA 48


>sp|DPOL_RSIV|DNA polymerase|Red sea bream iridovirus (RSIV)

Query: 3 PDGGASAD 10
PDGG +D
Sbjct: 423 PDGGCDSD 430


>sp|VF268_IIV3|UNCHARACTERIZED protein 074L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 PTPDGGAS 8
P+P GGA+
Sbjct: 772 PSPPGGAT 779


>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)

Query: 3 PDGGASAD 10
PDGGA+A+
Sbjct: 48 PDGGAAAN 55


>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 1 PTPDGG 6
P PDGG
Sbjct: 473 PDPDGG 478




58|Sequence|286|295|GASADLKEGP

***** No hits found ******


59|Sequence|291|300|LKEGPGNPEH

>sp|049R_IIV3|UNCHARACTERIZED protein 049R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 KEGPGNPEH 10
+EG GNPEH
Sbjct: 56 EEGGGNPEH 64


>sp|YL294_MIMIV|UNCHARACTERIZED protein L294|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 EGPGNPEH 10
EGPGNP
Sbjct: 2695 EGPGNPNQ 2702


>sp|Y102_OSHVF|UNCHARACTERIZED protein ORF102|Ostreid herpesvirus 1 (isolate France)

Query: 3 EGPGNP 8
EGPGNP
Sbjct: 597 EGPGNP 602


>sp|TERL_BPT7|TERMINASE, large subunit|Escherichia phage T7 (Bacteriophage T7)

Query: 4 GPGNPEH 10
GP NP+H
Sbjct: 130 GPANPDH 136


>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 5 PGNPEH 10
PG PEH
Sbjct: 575 PGEPEH 580


>sp|CAPS1_MIMIV|CAPSID protein 1|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LKEGPGNPEH 10
L +G GNP H
Sbjct: 473 LIDGSGNPTH 482


>sp|EXLYS_BPKMV|PEPTIDOGLYCAN hydrolase gp36|Pseudomonas phage phiKMV

Query: 2 KEGPGNPE 9
KEG NPE
Sbjct: 429 KEGEANPE 436


>sp|PB2_THOGV|POLYMERASE basic protein 2|Thogoto virus (isolate SiAr 126)

Query: 1 LKEGPGNPE 9
L+EG G PE
Sbjct: 679 LREGKGGPE 687


>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus

Query: 1 LKEGPGNPEH 10
LK+ GN EH
Sbjct: 314 LKKNTGNEEH 323


>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate

Query: 1 LKEGPGNPEH 10
LK+ GN EH
Sbjct: 314 LKKNTGNEEH 323


>sp|RIR1_VACCW|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Western Reserve)

Query: 1 LKEGPGNPEH 10
LK+ GN EH
Sbjct: 314 LKKNTGNEEH 323


>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 LKEGPGNPEH 10
LK+ GN EH
Sbjct: 314 LKKNTGNEEH 323


>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 1 LKEGPGNPEH 10
LK+ GN EH
Sbjct: 314 LKKNTGNEEH 323


>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)

Query: 1 LKEGPGNPEH 10
LK+ GN EH
Sbjct: 314 LKKNTGNDEH 323


>sp|VP1_AQRVA|OUTER capsid protein VP1|Aquareovirus A (isolate Chum

Query: 3 EGPGNPE 9
+GPG+P+
Sbjct: 340 QGPGDPQ 346


>sp|ORF7_HAPV1|UNCHARACTERIZED protein 7|Halorubrum pleomorphic virus 1 (HRPV-1)

Query: 3 EGPGNPE 9
EGP NP+
Sbjct: 5 EGPENPD 11


>sp|P3_PCVC|UNCHARACTERIZED protein p3|Penicillium chrysogenum virus (isolate Caston/2003)

Query: 3 EGPGNP 8
EGPG P
Sbjct: 229 EGPGRP 234


>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4

Query: 1 LKEGPGNPEH 10
L GPG P H
Sbjct: 47 LSLGPGRPCH 56




60|Sequence|296|305|GNPEHSVTGR

>sp|VF205_IIV6|PUTATIVE DNA ligase 205R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 GNPEHSV 7
GNP+HS+
Sbjct: 276 GNPKHSI 282


>sp|VE1_MNPVA|REPLICATION protein E1|Mastomys natalensis papillomavirus (isolate African

Query: 1 GNPEHSVTGR 10
GNPE+S + R
Sbjct: 550 GNPEYSFSNR 559


>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19

Query: 4 EHSVTGR 10
EH+VTGR
Sbjct: 100 EHTVTGR 106


>sp|NECK1_BPT4|NECK protein gp13|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 NPEHSVTGR 10
NP+H++ GR
Sbjct: 221 NPDHNLVGR 229


>sp|ACA2_BPZF4|ACA2 repressor|Pectobacterium phage ZF40 (Bacteriophage ZF40)

Query: 2 NPEHSVTG 9
NP+H+V G
Sbjct: 89 NPDHNVIG 96


>sp|049R_IIV3|UNCHARACTERIZED protein 049R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 GNPEHSVT 8
GNPEH T
Sbjct: 60 GNPEHYET 67


>sp|DPOL_BPT7|DNA-DIRECTED DNA polymerase|Escherichia phage T7 (Bacteriophage T7)

Query: 2 NPEHSVTGR 10
NP +VTGR
Sbjct: 421 NPNGAVTGR 429


>sp|DPOL_BPT3|DNA-DIRECTED DNA polymerase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 2 NPEHSVTGR 10
NP +VTGR
Sbjct: 421 NPNGAVTGR 429


>sp|YL200_MIMIV|UNCHARACTERIZED protein L200|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GNPEH 5
GNPEH
Sbjct: 149 GNPEH 153


>sp|ACB1_BPAC4|ANTI-CBASS protein Acb1|Acinetobacter phage Ac42 (Acinetobacter phage

Query: 3 PEHSVTG 9
P+H VTG
Sbjct: 125 PKHGVTG 131




61|Sequence|301|310|SVTGRPPDTA

>sp|PORTL_BPT7|PORTAL protein|Escherichia phage T7 (Bacteriophage T7)

Query: 2 VTGRPPDTA 10
VTGRP D +
Sbjct: 320 VTGRPEDIS 328


>sp|TRX2_EHV1B|TRIPLEX capsid protein 2|Equine herpesvirus 1 (strain Ab4p)

Query: 2 VTGRPPDT 9
V G PPDT
Sbjct: 53 VNGAPPDT 60


>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)

Query: 3 TGRPPDT 9
TG PPDT
Sbjct: 469 TGTPPDT 475




62|Sequence|306|315|PPDTAASPRC

>sp|GB_GAHVR|ENVELOPE glycoprotein B|Gallid herpesvirus 2 (strain RB-1b)

Query: 1 PPDTAASP 8
PP+ AA P
Sbjct: 238 PPEAAAEP 245


>sp|GB_GAHVM|ENVELOPE glycoprotein B|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 PPDTAASP 8
PP+ AA P
Sbjct: 238 PPEAAAEP 245


>sp|YL157_MIMIV|UNCHARACTERIZED protein L157|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PPDTAASPRC 10
P DT+ P C
Sbjct: 75 PSDTSIIPEC 84


>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)

Query: 1 PPDTAASPR 9
PPD A PR
Sbjct: 345 PPDVAGGPR 353


>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)

Query: 1 PPDTAASPR 9
PPD A PR
Sbjct: 345 PPDVAGGPR 353


>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)

Query: 1 PPDTAASPR 9
PPD A PR
Sbjct: 345 PPDVAGGPR 353


>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69

Query: 2 PDTAASPRC 10
P+T PRC
Sbjct: 224 PETTCVPRC 232


>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3

Query: 1 PPDTAASPR 9
PP TAA+P+
Sbjct: 92 PPTTAATPK 100


>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)

Query: 1 PPDTAASPR 9
PPD+ SP+
Sbjct: 295 PPDSIKSPQ 303




63|Sequence|311|320|ASPRCHAQEG

>sp|VIF_HV1JR|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCEYQAG 138


>sp|E313_ADECU|EARLY E3 13.3 kDa protein|Canine adenovirus serotype 1 (strain

Query: 3 PRCHAQEG 10
PRC A+EG
Sbjct: 27 PRCFAKEG 34


>sp|E313_ADECT|EARLY E3 13.3 kDa protein|Canine adenovirus serotype 2 (strain

Query: 3 PRCHAQEG 10
PRC A+EG
Sbjct: 27 PRCFAKEG 34


>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCEYQAG 138


>sp|VIF_HV1MP|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC+ Q G
Sbjct: 131 SPRCNYQAG 139


>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCECQAG 138


>sp|VIF_HV1M2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC+ Q G
Sbjct: 131 SPRCNYQAG 139


>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCEYQAG 138


>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCEYQAG 138


>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCEYQAG 138


>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCEYQAG 138


>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCEYQAG 138


>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCEYQAG 138


>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCEYQAG 138


>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCEYQAG 138


>sp|VIF_HV1ET|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCDYQAG 138


>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCEYQAG 138


>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCDYQAG 138


>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCEYQAG 138


>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCEYQAG 138


>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCDYQAG 138


>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCEYQAG 138


>sp|VIF_SIVCZ|VIRION infectivity factor|Simian immunodeficiency virus (isolate CPZ

Query: 2 SPRCHAQEG 10
+PRC +EG
Sbjct: 131 APRCEYKEG 139


>sp|VP5_RRSVT|PUTATIVE minor structural protein VP5|Rice ragged stunt virus (isolate

Query: 2 SPRCHAQE 9
+PRC A+E
Sbjct: 608 APRCKAKE 615


>sp|VIF_HV1MA|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 SPRCHAQEG 10
SPRC Q G
Sbjct: 130 SPRCDYQAG 138


>sp|VG53_BPML5|GENE 53 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 4 RCHAQ 8
RCHAQ
Sbjct: 228 RCHAQ 232


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 SPRCHAQ 8
SP CHA+
Sbjct: 1207 SPECHAE 1213


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 SPRCHAQ 8
SP CHA+
Sbjct: 1190 SPECHAE 1196


>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 CHAQEG 10
CHAQ G
Sbjct: 151 CHAQRG 156




64|Sequence|316|325|HAQEGDPVDG

>sp|Y021_OSHVF|UNCHARACTERIZED protein ORF21|Ostreid herpesvirus 1 (isolate France)

Query: 3 QEGDPVD 9
+EGDP+D
Sbjct: 234 EEGDPMD 240


>sp|POL2_ARMVN|RNA2 polyprotein|Arabis mosaic virus (isolate NW)

Query: 2 AQEGDPVD 9
AQE DP++
Sbjct: 271 AQEADPIN 278


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 1 HAQEGDPV 8
HAQ GD V
Sbjct: 1577 HAQPGDDV 1584




65|Sequence|321|330|DPVDGTCVRD

>sp|NS1_AADNV|INITIATOR protein NS1|Aedes albopictus densovirus (isolate Boublik/1994)

Query: 1 DPVDGTCV 8
D VDGTC+
Sbjct: 208 DGVDGTCI 215


>sp|NS1_AEDEV|INITIATOR protein NS1|Aedes densonucleosis virus (strain GKV

Query: 1 DPVDGTCV 8
D +DGTC+
Sbjct: 249 DGIDGTCI 256


>sp|TEG3_PSHV1|TEGUMENT protein UL14|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 PVDGTCVR 9
P D TCVR
Sbjct: 188 PSDATCVR 195


>sp|MVP_CMVY|MOVEMENT protein|Cucumber mosaic virus (strain Y)

Query: 2 PVDGTCV 8
P+DG CV
Sbjct: 121 PIDGQCV 127


>sp|MVP_CMVTR|MOVEMENT protein|Cucumber mosaic virus (strain Trk7)

Query: 2 PVDGTCV 8
P+DG CV
Sbjct: 121 PIDGQCV 127


>sp|MVP_CMVS|MOVEMENT protein|Cucumber mosaic virus (strain S)

Query: 2 PVDGTCV 8
P+DG CV
Sbjct: 121 PIDGQCV 127


>sp|MVP_CMVQ|MOVEMENT protein|Cucumber mosaic virus (strain Q)

Query: 2 PVDGTCV 8
P+DG CV
Sbjct: 121 PIDGQCV 127


>sp|MVP_CMVO|MOVEMENT protein|Cucumber mosaic virus (strain O)

Query: 2 PVDGTCV 8
P+DG CV
Sbjct: 121 PIDGQCV 127


>sp|MVP_CMVNT|MOVEMENT protein|Cucumber mosaic virus (strain NT9)

Query: 2 PVDGTCV 8
P+DG CV
Sbjct: 121 PIDGQCV 127


>sp|MVP_CMVKO|MOVEMENT protein|Cucumber mosaic virus (strain Kor)

Query: 2 PVDGTCV 8
P+DG CV
Sbjct: 121 PIDGQCV 127


>sp|MVP_CMVKI|MOVEMENT protein|Cucumber mosaic virus (strain Kin)

Query: 2 PVDGTCV 8
P+DG CV
Sbjct: 121 PIDGQCV 127


>sp|MVP_CMVCS|MOVEMENT protein|Cucumber mosaic virus (strain CS)

Query: 2 PVDGTCV 8
P+DG CV
Sbjct: 121 PIDGQCV 127


>sp|MVP_CMVC7|MOVEMENT protein|Cucumber mosaic virus (strain C7-2)

Query: 2 PVDGTCV 8
P+DG CV
Sbjct: 121 PIDGQCV 127


>sp|MVP_CMVPE|MOVEMENT protein|Cucumber mosaic virus (strain Pepo)

Query: 2 PVDGTCV 8
P+DG CV
Sbjct: 121 PIDGQCV 127


>sp|MVP_CMVN|MOVEMENT protein|Cucumber mosaic virus (strain N)

Query: 2 PVDGTCV 8
P+DG CV
Sbjct: 121 PIDGQCV 127


>sp|MVP_CMVM|MOVEMENT protein|Cucumber mosaic virus (strain M)

Query: 2 PVDGTCV 8
P+DG CV
Sbjct: 121 PIDGQCV 127


>sp|MVP_CMVFN|MOVEMENT protein|Cucumber mosaic virus (strain FNY)

Query: 2 PVDGTCV 8
P+DG CV
Sbjct: 121 PIDGQCV 127


>sp|MVP_CMVFT|MOVEMENT protein|Cucumber mosaic virus (strain FT)

Query: 2 PVDGTCV 8
P+DG CV
Sbjct: 121 PIDGQCV 127


>sp|NRAM_I76AK|NEURAMINIDASE A virus (strain A/Duck/New

Query: 1 DPVDGTC 7
DP+DG C
Sbjct: 331 DPIDGDC 337


>sp|POLG_PVCV2|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 1 DPVDGTCVRD 10
DP DG C D
Sbjct: 367 DPFDGHCPWD 376


>sp|POLG_PVCV1|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 1 DPVDGTCVRD 10
DP DG C D
Sbjct: 366 DPFDGHCPWD 375


>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 PVDGTCVRD 10
P++ TC+R+
Sbjct: 291 PINMTCIRE 299


>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human

Query: 1 DPVDGTCVRD 10
DP DGT D
Sbjct: 558 DPFDGTLAMD 567


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2 PVDGTCVRD 10
P+D C+RD
Sbjct: 2153 PIDLLCLRD 2161


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 2 PVDGTCVRD 10
P+D C+RD
Sbjct: 2153 PIDLLCLRD 2161


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2 PVDGTCVRD 10
P+D C+RD
Sbjct: 2173 PIDLLCLRD 2181


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2 PVDGTCVRD 10
P+D C+RD
Sbjct: 2203 PIDLLCLRD 2211


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 2 PVDGTCVRD 10
P+D C+RD
Sbjct: 2173 PIDLLCLRD 2181


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 2 PVDGTCVRD 10
P+D C+RD
Sbjct: 2203 PIDLLCLRD 2211


>sp|SPIKE_WBV24|SPIKE glycoprotein|White bream virus (isolate Blicca

Query: 1 DPVDGTC 7
+PV GTC
Sbjct: 1040 NPVTGTC 1046


>sp|RLIG_BPRHR|RNA ligase|Rhodothermus phage RM378 (Bacteriophage RM378)

Query: 1 DPVDGTCV 8
+ +DGTCV
Sbjct: 126 EKLDGTCV 133


>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 DPVDGTCV 8
+PV G C+
Sbjct: 680 EPVSGVCI 687


>sp|PG064_VACCW|PROTEIN OPG064|Vaccinia virus (strain Western Reserve)

Query: 1 DPVDGTCV 8
+PV G C+
Sbjct: 680 EPVSGVCI 687


>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 DPVDGTCV 8
+PV G C+
Sbjct: 680 EPVSGVCI 687


>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)

Query: 1 DPVDGTCV 8
+PV G C+
Sbjct: 680 EPVSGVCI 687


>sp|1A_AMV|REPLICATION protein 1a|Alfalfa mosaic virus (AMV)

Query: 1 DPVDGTC 7
DP++G C
Sbjct: 1071 DPINGPC 1077




66|Sequence|326|335|TCVRDSCSFP

>sp|L_LNYV3|RNA-DIRECTED RNA polymerase L|Lettuce necrotic yellows virus (isolate

Query: 4 RDSCSFP 10
RDSC FP
Sbjct: 2050 RDSCCFP 2056


>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 TCVRDSC 7
TC+RD+C
Sbjct: 135 TCIRDNC 141


>sp|TOP2_ASFWA|DNA topoisomerase 2|African swine fever virus (isolate

Query: 1 TCVRDSCS 8
T +RDSCS
Sbjct: 341 TTLRDSCS 348


>sp|TOP2_ASFP4|DNA topoisomerase 2|African swine fever virus (isolate

Query: 1 TCVRDSCS 8
T +RDSCS
Sbjct: 341 TTLRDSCS 348


>sp|TOP2_ASFM2|DNA topoisomerase 2|African swine fever virus (isolate

Query: 1 TCVRDSCS 8
T +RDSCS
Sbjct: 341 TTLRDSCS 348


>sp|TOP2_ASFK5|DNA topoisomerase 2|African swine fever virus (isolate

Query: 1 TCVRDSCS 8
T +RDSCS
Sbjct: 341 TTLRDSCS 348


>sp|TOP2_ASFB7|DNA topoisomerase 2|African swine fever virus (strain

Query: 1 TCVRDSCS 8
T +RDSCS
Sbjct: 341 TTLRDSCS 348


>sp|VF706_ASFWA|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 1 TCVRDSCSFP 10
+CV ++ SFP
Sbjct: 2 SCVHNNTSFP 11


>sp|TFNPH_ASFP4|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 1 TCVRDSCSFP 10
+CV ++ SFP
Sbjct: 2 SCVHNNTSFP 11


>sp|TFNPH_ASFM2|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 1 TCVRDSCSFP 10
+CV ++ SFP
Sbjct: 2 SCVHNNTSFP 11


>sp|TFNPH_ASFK5|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 1 TCVRDSCSFP 10
+CV ++ SFP
Sbjct: 2 SCVHNNTSFP 11


>sp|TFNPH_ASFB7|TERMINATION factor NPH-I homolog|African swine fever virus (strain

Query: 1 TCVRDSCSFP 10
+CV ++ SFP
Sbjct: 2 SCVHNNTSFP 11


>sp|VPHE_NPVOP|POLYHEDRAL envelope protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 CVRDSCSFP 10
C SCSFP
Sbjct: 56 CNPPSCSFP 64


>sp|L_TIBVC|RNA-DIRECTED RNA polymerase L|Tibrogargan virus (strain CS132) (TIBV)

Query: 2 CVRDSCSFP 10
CV D+ S+P
Sbjct: 1634 CVADTISYP 1642


>sp|027R_FRG3G|UNCHARACTERIZED protein 027R|Frog virus 3 (isolate Goorha)

Query: 2 CVRDSCSFP 10
CVR SFP
Sbjct: 465 CVRQMVSFP 473


>sp|L_MOKV|LARGE structural protein|Mokola virus (MOKV)

Query: 4 RDSCSFP 10
RDS SFP
Sbjct: 1514 RDSMSFP 1520


>sp|DPOL2_BPK54|DEPOLYMERASE 2, capsule K5-specific|Klebsiella phage K5-4 (Bacteriophage K5-4)

Query: 2 CVRDSCSF 9
CV+D+C+
Sbjct: 59 CVQDACAL 66


>sp|DPOL2_BPK52|DEPOLYMERASE 2, capsule K5-specific|Klebsiella phage K5-2 (Bacteriophage K5-2)

Query: 2 CVRDSCSF 9
CV+D+C+
Sbjct: 60 CVQDACAL 67


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1 TCVRDSC 7
TCV+ SC
Sbjct: 395 TCVKASC 401


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1 TCVRDSC 7
TCV+ SC
Sbjct: 395 TCVKASC 401


>sp|Y038_OSHVF|PUTATIVE RING finger protein ORF38|Ostreid herpesvirus 1 (isolate France)

Query: 4 RDSCSFP 10
RD C+FP
Sbjct: 183 RDKCTFP 189


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1 TCVRDSCS 8
TCV D CS
Sbjct: 638 TCVVDGCS 645




67|Sequence|331|340|SCSFPEAVSG

>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1 SCSFPE 6
+CSFPE
Sbjct: 1683 NCSFPE 1688


>sp|AC11_NPVAC|PROTEIN AC11|Autographa californica nuclear polyhedrosis virus

Query: 1 SCSFPEAV 8
SC+F EAV
Sbjct: 62 SCTFDEAV 69


>sp|VPHE_NPVOP|POLYHEDRAL envelope protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 SCSFPEAVS 9
SCSFP + S
Sbjct: 60 SCSFPPSNS 68




68|Sequence|336|345|EAVSGHPQAS

>sp|YORK_BPSPB|PUTATIVE single-strand DNA-specific exonuclease yorK|Bacillus phage SPbeta

Query: 1 EAVSGHPQAS 10
E V GHP A+
Sbjct: 412 EFVEGHPNAA 421


>sp|YL232_MIMIV|PUTATIVE serine/threonine-protein kinase L232|Acanthamoeba polyphaga

Query: 1 EAVSGHPQ 8
E +SGHP+
Sbjct: 175 ELISGHPR 182


>sp|ENLYS_BP263|ENDOLYSIN 2638A|Staphylococcus phage 2638A

Query: 4 SGHPQA 9
+GHPQA
Sbjct: 426 TGHPQA 431




69|Sequence|341|350|HPQASGSRSP

>sp|PG070_VARV|PROTEIN OPG070|Variola virus

Query: 1 HPQASGSRSP 10
HP S +RSP
Sbjct: 205 HPNLSRARSP 214


>sp|PG070_VAR67|PROTEIN OPG070|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 HPQASGSRSP 10
HP S +RSP
Sbjct: 205 HPNLSRARSP 214


>sp|PG070_VACCC|PROTEIN OPG070|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 HPQASGSRSP 10
HP S +RSP
Sbjct: 205 HPNLSRARSP 214


>sp|PG070_MONPV|PROTEIN OPG070|Monkeypox virus (MPXV)

Query: 1 HPQASGSRSP 10
HP S +RSP
Sbjct: 205 HPNLSRARSP 214


>sp|PG070_VACCW|PROTEIN OPG070|Vaccinia virus (strain Western Reserve)

Query: 1 HPQASGSRSP 10
HP S +RSP
Sbjct: 205 HPNLSRARSP 214


>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)

Query: 1 HPQASGSR 8
HP A+GSR
Sbjct: 679 HPAAAGSR 686


>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)

Query: 2 PQASGSRSP 10
PQ +G+ SP
Sbjct: 1009 PQGTGNNSP 1017


>sp|VF205_IIV3|PUTATIVE DNA ligase 052L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 PQASGSRSP 10
P A+GS SP
Sbjct: 610 PSAAGSASP 618


>sp|LTP_EHV2|LARGE tegument protein deneddylase|Equine herpesvirus 2 (strain 86/87)

Query: 2 PQASGSRSP 10
P A GSRSP
Sbjct: 554 PSARGSRSP 562


>sp|NS1A_MASV1|NON-STRUCTURAL polyprotein 1A|Mink astrovirus 1 (MAstV-1)

Query: 1 HPQASGSR 8
HP+ SG R
Sbjct: 10 HPRGSGQR 17


>sp|NS1AB_MASV1|NON-STRUCTURAL polyprotein 1AB|Mink astrovirus 1 (MAstV-1)

Query: 1 HPQASGSR 8
HP+ SG R
Sbjct: 10 HPRGSGQR 17


>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)

Query: 2 PQASGSRSP 10
P+A+G R+P
Sbjct: 872 PEAAGMRAP 880


>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)

Query: 2 PQASGSRSP 10
P+A+G R+P
Sbjct: 872 PEAAGMRAP 880




70|Sequence|346|355|GSRSPGCPRC

>sp|NP1_HBOC4|NON-STRUCTURAL protein NP-1|Human bocavirus 4 (HBoV4) (Human

Query: 4 SPGCPRC 10
SP CPRC
Sbjct: 168 SPDCPRC 174


>sp|NP1_HBOC2|NON-STRUCTURAL protein NP-1|Human bocavirus 2 (HBoV2) (Human

Query: 4 SPGCPRC 10
SP CPRC
Sbjct: 168 SPDCPRC 174


>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate

Query: 4 SPGCPRC 10
+P CP C
Sbjct: 1120 APACPNC 1126


>sp|L_CPXVB|RNA-DIRECTED RNA polymerase L|Cupixi mammarenavirus (isolate Rat/Brasil/BeAn

Query: 1 GSRSPGCPRC 10
G+ P CP C
Sbjct: 278 GTTVPECPMC 287


>sp|V216_FOWPN|PUTATIVE ankyrin repeat protein FPV216|Fowlpox virus (strain NVSL) (FPV)

Query: 6 GCPRC 10
GCP+C
Sbjct: 119 GCPKC 123


>sp|TR443_MIMIV|THIOREDOXIN domain-containing protein R443|Acanthamoeba polyphaga mimivirus

Query: 4 SPGCPRC 10
+P CP C
Sbjct: 81 NPSCPHC 87


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 6 GCPRC 10
GCP+C
Sbjct: 18 GCPKC 22


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d

Query: 6 GCPRC 10
GCP+C
Sbjct: 18 GCPKC 22


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 2 SRSPGCPRC 10
S +P CP C
Sbjct: 279 SLAPECPMC 287


>sp|YR311_MIMIV|PUTATIVE RING finger protein R311|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 SPGCPRC 10
S GCP C
Sbjct: 533 SKGCPLC 539


>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United

Query: 2 SRSPGCPRC 10
S S GC RC
Sbjct: 1152 SVSGGCTRC 1160


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 2 SRSPGCPRC 10
S S GC RC
Sbjct: 1152 SVSGGCTRC 1160


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 4 SPGCPRC 10
S GCPRC
Sbjct: 1172 SAGCPRC 1178


>sp|MVP_BYMV|P3N-PIPO polyprotein|Bean yellow mosaic virus

Query: 2 SRSPGCPRC 10
S GCP C
Sbjct: 963 SEGSGCPFC 971


>sp|BHLF1_EBVB9|UNCHARACTERIZED protein BHLF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 SRSPGCPRC 10
+R+PGCPR
Sbjct: 150 ARNPGCPRT 158


Query: 2 SRSPGCPRC 10
+R+PGCPR
Sbjct: 275 ARNPGCPRT 283


Query: 2 SRSPGCPRC 10
+R+PGCPR
Sbjct: 400 ARNPGCPRT 408


Query: 2 SRSPGCPRC 10
+R+PGCPR
Sbjct: 525 ARNPGCPRT 533


Query: 2 SRSPGCPRC 10
+R+PGCPR
Sbjct: 650 ARNPGCPRT 658


>sp|POL2_GCMV|RNA2 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 4 SPGCPRC 10
+P CP C
Sbjct: 151 APKCPHC 157


>sp|IAP1_NPVOP|APOPTOSIS inhibitor 1|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 4 SPGCPRC 10
SPG PRC
Sbjct: 112 SPGKPRC 118


>sp|ENDO1_BPT5|PUTATIVE endonuclease|Escherichia phage T5 (Enterobacteria phage

Query: 6 GCPRC 10
GCP C
Sbjct: 109 GCPHC 113




71|Sequence|351|360|GCPRCQDSHE

>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 CPRCQD 7
CP CQD
Sbjct: 370 CPACQD 375


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 CPRCQD 7
CP CQD
Sbjct: 370 CPACQD 375


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 CPRCQD 7
CP CQD
Sbjct: 370 CPACQD 375


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 CPRCQD 7
CP CQD
Sbjct: 370 CPACQD 375


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 CPRCQD 7
CP CQD
Sbjct: 370 CPACQD 375


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004)

Query: 2 CPRCQD 7
CP CQD
Sbjct: 370 CPACQD 375


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 CPRCQD 7
CP CQD
Sbjct: 370 CPACQD 375


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 CPRCQD 7
CP CQD
Sbjct: 370 CPACQD 375


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 2 CPRCQDSH 9
C RCQ H
Sbjct: 1538 CSRCQGKH 1545


>sp|YR748_MIMIV|PUTATIVE ankyrin repeat protein R748|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GCPRCQDSHE 10
GC C DS E
Sbjct: 519 GCQSCYDSDE 528


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 2 CPRCQDS 8
CP C DS
Sbjct: 453 CPNCYDS 459


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d

Query: 1 GCPRC 5
GCP+C
Sbjct: 18 GCPKC 22


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 1 GCPRC 5
GCP+C
Sbjct: 18 GCPKC 22


>sp|RDRP_PVXX3|RNA replication protein|Potato virus X (strain X3)

Query: 4 RCQDSHE 10
+CQDS+E
Sbjct: 1401 KCQDSYE 1407


>sp|RDRP_PVXHB|RNA replication protein|Potato virus X (strain HB)

Query: 4 RCQDSHE 10
+CQDS+E
Sbjct: 1401 KCQDSYE 1407


>sp|RDRP_PVX|RNA replication protein|Potato virus X (PVX)

Query: 4 RCQDSHE 10
+CQDS+E
Sbjct: 1401 KCQDSYE 1407


>sp|RDRP_PVXCP|RNA replication protein|Potato virus X (strain CP)

Query: 4 RCQDSHE 10
+CQDS+E
Sbjct: 1401 KCQDSYE 1407


>sp|POL_MMTVC|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 2 CPRCQDSH 9
CPRC+ +
Sbjct: 554 CPRCKKGY 561


>sp|POL_MMTVB|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 2 CPRCQDSH 9
CPRC+ +
Sbjct: 554 CPRCKKGY 561


>sp|POL_SRV2|GAG-PRO-POL polyprotein|Simian retrovirus SRV-2

Query: 2 CPRCQ 6
CPRC+
Sbjct: 575 CPRCK 579


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 3 PRCQDSHE 10
P C+D H+
Sbjct: 4402 PNCEDCHD 4409


>sp|RDRP_PCV87|REPLICASE large subunit|Peanut clump virus (isolate 87/TGTA2)

Query: 1 GCPRCQDS 8
CPR Q+S
Sbjct: 1254 ACPRLQES 1261


>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)

Query: 3 PRCQDSH 9
PRC+D +
Sbjct: 1639 PRCEDDY 1645


>sp|POL_SIVV1|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 2 CPRCQ 6
CP+CQ
Sbjct: 1213 CPKCQ 1217


>sp|PRO_MMTVC|GAG-PRO polyprotein|Mouse mammary tumor virus (strain

Query: 2 CPRCQDSH 9
CPRC+ +
Sbjct: 554 CPRCKKGY 561


>sp|PRO_MMTVB|GAG-PRO polyprotein|Mouse mammary tumor virus (strain

Query: 2 CPRCQDSH 9
CPRC+ +
Sbjct: 554 CPRCKKGY 561


>sp|POL_SIVG1|GAG-POL polyprotein|Simian immunodeficiency virus agm.grivet (isolate

Query: 1 GCPRCQ 6
CP+CQ
Sbjct: 1208 ACPKCQ 1213


>sp|POLG_BVY3|GENOME polyprotein|Blackberry virus Y (isolate Blackberry

Query: 2 CPRCQDS 8
CP C D+
Sbjct: 452 CPSCSDA 458


>sp|POL_SRV1|GAG-PRO-POL polyprotein|Simian retrovirus SRV-1

Query: 2 CPRCQ 6
CPRC+
Sbjct: 579 CPRCK 583


>sp|POL_SIVVT|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 2 CPRCQ 6
CP+CQ
Sbjct: 1216 CPKCQ 1220


>sp|POL_SIVVG|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 2 CPRCQ 6
CP+CQ
Sbjct: 1214 CPKCQ 1218


>sp|POL_MPMV|GAG-PRO-POL polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian

Query: 2 CPRCQ 6
CPRC+
Sbjct: 578 CPRCK 582


>sp|GAG_MMTVC|GAG polyprotein|Mouse mammary tumor virus (strain

Query: 2 CPRCQDSH 9
CPRC+ +
Sbjct: 554 CPRCKKGY 561


>sp|GAG_MMTVB|GAG polyprotein|Mouse mammary tumor virus (strain

Query: 2 CPRCQDSH 9
CPRC+ +
Sbjct: 554 CPRCKKGY 561


>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United

Query: 1 GCPRCQDSHE 10
GC RC E
Sbjct: 1156 GCTRCDSGDE 1165


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 1 GCPRCQDSHE 10
GC RC E
Sbjct: 1156 GCTRCDSGDE 1165


>sp|ORFC_PSHV1|UNCHARACTERIZED protein ORFC|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 GCPRCQD 7
G PRC+D
Sbjct: 158 GLPRCRD 164


>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 2 CPRCQ 6
CPRC+
Sbjct: 536 CPRCK 540


>sp|POL_SMRVH|GAG-PRO-POL polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 2 CPRCQ 6
CPRC+
Sbjct: 649 CPRCK 653


>sp|SPIKE_BCHK5|SPIKE glycoprotein|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 CPRCQDSHE 10
C RC DS++
Sbjct: 1334 CNRCCDSYD 1342


>sp|PRO_SRV2|GAG-PRO polyprotein|Simian retrovirus SRV-2

Query: 2 CPRCQ 6
CPRC+
Sbjct: 575 CPRCK 579


>sp|PRO_JSRV|GAG-PRO polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 2 CPRCQ 6
CPRC+
Sbjct: 536 CPRCK 540


>sp|VE6_HPV40|PROTEIN E6|Human papillomavirus 40

Query: 1 GCPRCQDSH 9
CPRC D H
Sbjct: 62 ACPRCLDLH 70


>sp|YR311_MIMIV|PUTATIVE RING finger protein R311|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GCPRCQD 7
GCP C +
Sbjct: 535 GCPLCME 541


>sp|TGB2_PVSP|MOVEMENT protein TGB2|Potato virus S (strain Peruvian)

Query: 2 CPRCQDSH 9
CPRC H
Sbjct: 99 CPRCNRVH 106


>sp|PRO_SMRVH|GAG-PRO polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 2 CPRCQ 6
CPRC+
Sbjct: 649 CPRCK 653


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 1 GCPRC 5
GCPRC
Sbjct: 1174 GCPRC 1178


>sp|PRO_MPMV|GAG-PRO polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian

Query: 2 CPRCQ 6
CPRC+
Sbjct: 578 CPRCK 582


>sp|PRO_SRV1|GAG-PRO polyprotein|Simian retrovirus SRV-1

Query: 2 CPRCQ 6
CPRC+
Sbjct: 579 CPRCK 583


>sp|SPIKE_BC133|SPIKE glycoprotein|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 CPRCQDSHE 10
C C DS+E
Sbjct: 1332 CKNCCDSYE 1340


>sp|SPIKE_BCHK4|SPIKE glycoprotein|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 CPRCQDSHE 10
C C DS+E
Sbjct: 1334 CKNCCDSYE 1342


>sp|GAG_SRV2|GAG polyprotein|Simian retrovirus SRV-2

Query: 2 CPRCQ 6
CPRC+
Sbjct: 575 CPRCK 579


>sp|GAG_SMRVH|GAG polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 2 CPRCQ 6
CPRC+
Sbjct: 649 CPRCK 653




72|Sequence|356|365|QDSHERKSPG

>sp|EXON_IIV6|PUTATIVE exonuclease 012L|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 SHERKSPG 10
+H+RK PG
Sbjct: 110 AHDRKKPG 117


>sp|POLG_FCVC6|GENOME polyprotein|Feline calicivirus (strain CFI/68 FIV)

Query: 2 DSHERKSPG 10
+SH+R PG
Sbjct: 604 ESHKRARPG 612


>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)

Query: 2 DSHERKSPG 10
+SH+R PG
Sbjct: 605 ESHKRARPG 613


>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)

Query: 2 DSHERKSPG 10
+SH+R PG
Sbjct: 605 ESHKRARPG 613




73|Sequence|361|370|RKSPGSLSPQ

>sp|YL146_MIMIV|UNCHARACTERIZED protein L146|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 RKSPGSL 7
RK+PGSL
Sbjct: 43 RKNPGSL 49


>sp|POL_WMSV|GAG-POL polyprotein|Woolly monkey sarcoma virus (WMSV)

Query: 1 RKSPGSLSPQ 10
R PGSL P+
Sbjct: 1615 RHRPGSLEPR 1624




74|Sequence|366|375|SLSPQPLPQC

>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)

Query: 1 SLSPQPLPQC 10
S+SP +PQC
Sbjct: 351 SVSPISIPQC 360


>sp|YR347_MIMIV|UNCHARACTERIZED protein R347|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 PQPLPQC 10
P+P+ QC
Sbjct: 390 PEPIDQC 396


>sp|Y059_OSHVF|UNCHARACTERIZED protein ORF59|Ostreid herpesvirus 1 (isolate France)

Query: 2 LSPQPLPQC 10
L+P +PQC
Sbjct: 241 LTPSVVPQC 249


>sp|POL_SIVGB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate GB1)

Query: 1 SLSPQPL 7
SLSP+PL
Sbjct: 1024 SLSPEPL 1030


>sp|VNS2_AQRVG|NON-STRUCTURAL protein 2|Aquareovirus G (isolate American grass

Query: 1 SLSPQPLPQC 10
+LSP LP C
Sbjct: 221 ALSPSDLPDC 230


>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)

Query: 1 SLSPQPLPQ 9
SL+P P+PQ
Sbjct: 481 SLTPAPVPQ 489


>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)

Query: 5 QPLPQC 10
QP PQC
Sbjct: 856 QPTPQC 861


>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 3 SPQPLPQ 9
SP PLP+
Sbjct: 120 SPNPLPE 126


>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)

Query: 5 QPLPQC 10
QP PQC
Sbjct: 854 QPTPQC 859


>sp|PHOSP_PI1HD|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 3 SPQPLPQ 9
SP PLP+
Sbjct: 120 SPNPLPE 126


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 3 SPQPLP 8
SP+PLP
Sbjct: 1312 SPEPLP 1317


>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 3 SPQPLPQ 9
SP PLP+
Sbjct: 120 SPNPLPE 126


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 3 SPQPLP 8
SP+PLP
Sbjct: 1311 SPEPLP 1316


>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 3 SPQPLPQ 9
SP PLP+
Sbjct: 120 SPNPLPE 126


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 5 QPLPQC 10
QP PQC
Sbjct: 849 QPTPQC 854




75|Sequence|371|380|PLPQCKRHLK

>sp|PG072_VACCW|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Vaccinia virus (strain

Query: 1 PLPQCKRH 8
P P C+RH
Sbjct: 42 PCPACRRH 49


>sp|PG072_MONPV|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Monkeypox virus (MPXV)

Query: 1 PLPQCKRH 8
P P C+RH
Sbjct: 42 PCPACRRH 49


>sp|PG072_VACCC|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Vaccinia virus (strain

Query: 1 PLPQCKRH 8
P P C+RH
Sbjct: 42 PCPACRRH 49


>sp|PG072_VARV|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus

Query: 1 PLPQCKRH 8
P P C+RH
Sbjct: 42 PCPACRRH 49


>sp|PG072_VAR67|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus (isolate

Query: 1 PLPQCKRH 8
P P C+RH
Sbjct: 42 PCPACRRH 49


>sp|RIR2_OSHVF|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Ostreid herpesvirus 1 (isolate France)

Query: 1 PLPQCK 6
PLP+CK
Sbjct: 145 PLPECK 150


>sp|POL1_RCMV|RNA1 polyprotein|Red clover mottle virus (RCMV)

Query: 4 QCKRHL 9
QC+RHL
Sbjct: 112 QCQRHL 117


>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)

Query: 2 LPQCKRHLK 10
L +CK+HLK
Sbjct: 109 LNECKQHLK 117


>sp|1A_CCMV|REPLICATION protein 1a|Cowpea chlorotic mottle virus (CCMV)

Query: 2 LPQCKRHL 9
LP+CKR L
Sbjct: 743 LPRCKRLL 750


>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)

Query: 4 QCKRHLK 10
QC++H+K
Sbjct: 366 QCRQHIK 372


>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)

Query: 1 PLPQCKR 7
P PQC R
Sbjct: 855 PTPQCTR 861


>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)

Query: 1 PLPQCKR 7
P PQC R
Sbjct: 857 PTPQCAR 863


>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 4 QCKRHLK 10
QC++H+K
Sbjct: 366 QCRQHIK 372


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 1 PLPQCKR 7
P PQC R
Sbjct: 850 PTPQCTR 856


>sp|096R_FRG3G|UNCHARACTERIZED protein 096R|Frog virus 3 (isolate Goorha)

Query: 3 PQCKRHLK 10
P C+ HLK
Sbjct: 22 PVCQTHLK 29


>sp|COM_BPMU|TRANSLATIONAL activator com|Escherichia phage Mu (Bacteriophage Mu)

Query: 3 PQCKRHL 9
P+CKRH+
Sbjct: 27 PRCKRHI 33


>sp|COM_BPD10|TRANSLATIONAL activator com|Escherichia phage D108 (Bacteriophage D108)

Query: 3 PQCKRHL 9
P+CKRH+
Sbjct: 27 PRCKRHI 33


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2 LPQCKRHLK 10
LP C+ HL+
Sbjct: 1549 LPVCQEHLE 1557


>sp|MVP_SBMVG|P3N-PIPO polyprotein|Soybean mosaic virus (strain G2)

Query: 4 QCKRHLK 10
QC++H+K
Sbjct: 366 QCRQHIK 372


>sp|V093_FOWPN|PROBABLE FAD-linked sulfhydryl oxidase FPV093|Fowlpox virus (strain NVSL)

Query: 5 CKRHL 9
CKRHL
Sbjct: 28 CKRHL 32


>sp|MVP_SBMVN|P3N-PIPO polyprotein|Soybean mosaic virus (strain N)

Query: 4 QCKRHLK 10
QC++H+K
Sbjct: 366 QCRQHIK 372




76|Sequence|376|385|KRHLKQVQLL

>sp|CAPSD_CLBVS|CAPSID protein|Citrus leaf blotch virus (isolate

Query: 3 HLKQVQL 9
HLK+VQL
Sbjct: 183 HLKRVQL 189


>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 KRHLKQVQLL 10
+RHL+ QLL
Sbjct: 572 ERHLRDQQLL 581


>sp|VE4_CRPVK|PROBABLE protein E4|Cottontail rabbit papillomavirus (strain Kansas)

Query: 1 KRHLKQVQLL 10
KRH K+ QLL
Sbjct: 19 KRHSKRTQLL 28




77|Sequence|381|390|QVQLLFCEDH

>sp|YR765_MIMIV|PUTATIVE BTB/POZ domain-containing protein R765|Acanthamoeba polyphaga

Query: 3 QLLFCEDH 10
QL+FC +H
Sbjct: 269 QLIFCHNH 276


>sp|YL611_MIMIV|UNCHARACTERIZED protein L611|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 QLLFCEDH 10
QL+ C+DH
Sbjct: 574 QLIHCKDH 581


>sp|SCAF_EHV2|CAPSID scaffolding protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 QVQLLFCED 9
Q+Q +FCE+
Sbjct: 630 QLQKIFCEE 638


>sp|YL098_MIMIV|PUTATIVE BTB/POZ domain-containing protein L98|Acanthamoeba polyphaga

Query: 4 LLFCEDH 10
+ FCE+H
Sbjct: 332 MFFCENH 338


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 4 LLFCEDH 10
+L+C+DH
Sbjct: 6464 MLWCKDH 6470


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 4 LLFCEDH 10
+L+C+DH
Sbjct: 6476 MLWCKDH 6482


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 6 FCEDH 10
+CEDH
Sbjct: 5453 YCEDH 5457


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 6 FCEDH 10
+CEDH
Sbjct: 5401 YCEDH 5405


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 6 FCEDH 10
+CEDH
Sbjct: 5368 YCEDH 5372


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 6 FCEDH 10
+CEDH
Sbjct: 5368 YCEDH 5372


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 6 FCEDH 10
+CEDH
Sbjct: 5368 YCEDH 5372


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 6 FCEDH 10
+CEDH
Sbjct: 5368 YCEDH 5372


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 6 FCEDH 10
+CEDH
Sbjct: 5368 YCEDH 5372


>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 1 QVQLLFCEDH 10
+ QL+F +DH
Sbjct: 1211 ETQLIFNDDH 1220


>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 LFCEDH 10
+FC+DH
Sbjct: 219 VFCKDH 224




78|Sequence|386|395|FCEDHDEPIC

>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 1 FCEDHDEPIC 10
CE H P+C
Sbjct: 499 LCEKHTRPVC 508


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 FCEDHDEPIC 10
CE H P+C
Sbjct: 499 LCEKHTRPVC 508


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 FCEDHDEPIC 10
CE+ DE IC
Sbjct: 2974 LCEEADEGIC 2983


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 FCEDHDEPIC 10
CE+ DE IC
Sbjct: 2974 LCEEADEGIC 2983


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 FCEDHDEPIC 10
CE+ DE IC
Sbjct: 2974 LCEEADEGIC 2983


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 FCEDHDEPIC 10
CE+ DE IC
Sbjct: 2974 LCEEADEGIC 2983


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 FCEDHDEPIC 10
CE+ DE IC
Sbjct: 2974 LCEEADEGIC 2983


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 FCEDHDEPIC 10
CE+ DE IC
Sbjct: 2974 LCEEADEGIC 2983


Query: 1 FCEDH 5
+CEDH
Sbjct: 5368 YCEDH 5372


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 FCEDHDEPIC 10
CE+ DE IC
Sbjct: 2974 LCEEADEGIC 2983


Query: 1 FCEDH 5
+CEDH
Sbjct: 5368 YCEDH 5372


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 FCEDHDEPIC 10
CE+ DE IC
Sbjct: 2974 LCEEADEGIC 2983


Query: 1 FCEDH 5
+CEDH
Sbjct: 5368 YCEDH 5372


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 FCEDHDEPIC 10
CE+ DE IC
Sbjct: 2974 LCEEADEGIC 2983


Query: 1 FCEDH 5
+CEDH
Sbjct: 5368 YCEDH 5372


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 FCEDHDEPIC 10
CE+ DE IC
Sbjct: 2974 LCEEADEGIC 2983


Query: 1 FCEDH 5
+CEDH
Sbjct: 5368 YCEDH 5372


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 FCEDHDEPI 9
+C DH PI
Sbjct: 5236 YCRDHRPPI 5244


>sp|CAPSD_BPPRD|MAJOR capsid protein P3|Enterobacteria phage PRD1 (Bacteriophage PRD1)

Query: 1 FCEDHDEPI 9
+C++ D+PI
Sbjct: 342 YCDNRDKPI 350


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 FCEDHDEP 8
+C+ H EP
Sbjct: 2467 YCDGHSEP 2474


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 1 FCEDHDEP 8
+C+ H EP
Sbjct: 2440 YCDGHSEP 2447


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 1 FCEDHDEP 8
+C+ H EP
Sbjct: 2445 YCDGHSEP 2452


>sp|RDRP_PVMR|RNA replication polyprotein|Potato virus M (strain Russian)

Query: 1 FCEDHDEPIC 10
FC +PIC
Sbjct: 1078 FCGRRKDPIC 1087


>sp|YR599_MIMIV|PUTATIVE ankyrin repeat protein R599|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 CEDHDEPI 9
CED+DE I
Sbjct: 312 CEDYDETI 319


>sp|Y029_SIFVH|UNCHARACTERIZED protein 29|Sulfolobus islandicus filamentous virus (isolate

Query: 1 FCEDHDE 7
FCE +DE
Sbjct: 24 FCETYDE 30


>sp|CAPSD_BPPAJ|CAPSID polyprotein|Pseudomonas phage PAJU2

Query: 4 DHDEPI 9
+HDEPI
Sbjct: 56 NHDEPI 61


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 4 DHDEPIC 10
DHD P C
Sbjct: 1187 DHDSPEC 1193


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 4 DHDEPIC 10
DHD P C
Sbjct: 1204 DHDSPEC 1210


>sp|VP3_MYRV9|OUTER capsid protein VP3|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 2 CEDHDEPIC 10
C+ D P+C
Sbjct: 753 CQKSDLPVC 761


>sp|HELI_NPVAC|DNA replication helicase|Autographa californica nuclear polyhedrosis

Query: 2 CEDHDEP 8
CED +EP
Sbjct: 73 CEDTEEP 79


>sp|POL1_SDVS5|RNA1 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 1 FCEDHDEPI 9
+CE D P+
Sbjct: 844 YCESEDAPL 852


>sp|POL2_BAYMY|GENOME polyprotein 2|Barley yellow mosaic virus (isolate

Query: 4 DHDEPI 9
+HDEP+
Sbjct: 453 EHDEPV 458


>sp|POL2_BAYMJ|GENOME polyprotein 2|Barley yellow mosaic virus (strain

Query: 4 DHDEPI 9
+HDEP+
Sbjct: 453 EHDEPV 458


>sp|POL2_BAYMG|GENOME polyprotein 2|Barley yellow mosaic virus (isolate

Query: 4 DHDEPI 9
+HDEP+
Sbjct: 453 EHDEPV 458


>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)

Query: 1 FCEDHDEP 8
+ +DHD P
Sbjct: 372 YIQDHDNP 379


>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P

Query: 3 EDHDEPIC 10
ED D P+C
Sbjct: 2 EDEDVPVC 9


>sp|SIGNS_REOVL|PROTEIN sigma-NS|Reovirus type 1 (strain Lang)

Query: 1 FCEDHDEPIC 10
+CE+ E IC
Sbjct: 240 YCEETAEAIC 249


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 FCEDHDEPIC 10
CE+ +E IC
Sbjct: 3064 LCEEAEEGIC 3073


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 FCEDHDEPIC 10
CE+ +E IC
Sbjct: 3061 LCEEAEEGIC 3070


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 FCEDHDEPIC 10
CE+ +E IC
Sbjct: 3064 LCEEAEEGIC 3073


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 FCEDHDEPIC 10
CE+ +E IC
Sbjct: 3061 LCEEAEEGIC 3070


Query: 1 FCEDH 5
+CEDH
Sbjct: 5453 YCEDH 5457


>sp|SIGNS_REOVD|PROTEIN sigma-NS|Reovirus type 3 (strain Dearing)

Query: 1 FCEDHDEPIC 10
+CE+ E IC
Sbjct: 240 YCEETAEAIC 249


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 1 FCEDH 5
+CEDH
Sbjct: 5401 YCEDH 5405


>sp|034R_FRG3G|UNCHARACTERIZED protein 034R|Frog virus 3 (isolate Goorha)

Query: 3 EDHDEPIC 10
+DH++P C
Sbjct: 43 DDHNDPGC 50




79|Sequence|391|400|DEPICLICSL

>sp|RIR1_PSHV1|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 DEPICLIC 8
D+P CL C
Sbjct: 803 DDPTCLAC 810


>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P

Query: 1 DEPICLICS 9
D P+C IC+
Sbjct: 5 DVPVCWICN 13


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 DEPICLICS 9
D+P C+ CS
Sbjct: 2200 DKPSCIACS 2208


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 DEPICLICS 9
D+P C+ CS
Sbjct: 2200 DKPSCIACS 2208


>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)

Query: 2 EPICLI 7
EP+CLI
Sbjct: 1228 EPVCLI 1233


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 2 EPICLI 7
EP+CLI
Sbjct: 1232 EPVCLI 1237


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 2 EPICLI 7
EP+CLI
Sbjct: 1232 EPVCLI 1237


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 2 EPICLI 7
EP+CLI
Sbjct: 1232 EPVCLI 1237


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 2 EPICLI 7
EP+CLI
Sbjct: 1234 EPVCLI 1239


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 2 EPICLI 7
EP+CLI
Sbjct: 1232 EPVCLI 1237


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 2 EPICLI 7
EP+CLI
Sbjct: 1232 EPVCLI 1237


>sp|DNBI_ALHV1|MAJOR DNA-binding protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 DEPICLICS 9
+ P+C +CS
Sbjct: 451 NSPVCSLCS 459


>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)

Query: 1 DEPICLICS 9
D+ +CL CS
Sbjct: 235 DKKLCLFCS 243


>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 DEPICLICS 9
D+ +CL CS
Sbjct: 235 DKKLCLFCS 243


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 2 EPICLICS 9
EP C+IC+
Sbjct: 189 EPGCVICA 196


>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31

Query: 2 EPICLICSL 10
+P CL C L
Sbjct: 236 QPYCLYCHL 244


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 2 EPICLIC 8
EPI +IC
Sbjct: 585 EPIAIIC 591


>sp|VE7_HPV40|PROTEIN E7|Human papillomavirus 40

Query: 2 EPICLICS 9
EP+CL C+
Sbjct: 18 EPVCLNCN 25


>sp|HEMA_CVP67|HEMAGGLUTININ-ESTERASE hemagglutinating encephalomyelitis virus (strain

Query: 5 CLICSL 10
CL+CS+
Sbjct: 8 CLVCSI 13


>sp|HEMA_CVPIA|HEMAGGLUTININ-ESTERASE hemagglutinating encephalomyelitis virus (strain

Query: 5 CLICSL 10
CL+CS+
Sbjct: 8 CLVCSI 13


>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P

Query: 3 PICLIC 8
PIC IC
Sbjct: 13 PICWIC 18




80|Sequence|396|405|LICSLSQEHQ

>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 LICSLSQEH 9
L+ SLSQEH
Sbjct: 1161 LLFSLSQEH 1169


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 LICSLSQEH 9
L+ SLSQEH
Sbjct: 1159 LLFSLSQEH 1167


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 LICSLSQEH 9
L+ SLSQEH
Sbjct: 1159 LLFSLSQEH 1167


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 LICSLSQEH 9
L+ SLSQEH
Sbjct: 1161 LLFSLSQEH 1169


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 LICSLSQEH 9
L+ SLSQEH
Sbjct: 1159 LLFSLSQEH 1167


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 LICSLSQEH 9
L+ SLSQEH
Sbjct: 1159 LLFSLSQEH 1167


>sp|YONO_BPSPB|DNA-DIRECTED RNA polymerase YonO|Bacillus phage SPbeta (Bacillus phage

Query: 1 LICSLSQEH 9
L C LS EH
Sbjct: 171 LTCGLSVEH 179




81|Sequence|401|410|SQEHQGHRVR

>sp|RAP94_FOWPN|RNA polymerase-associated transcription-specificity factor

Query: 1 SQEHQGHRV 9
SQEH H++
Sbjct: 726 SQEHTNHKI 734


>sp|BP45_BPMU|BASEPLATE puncturing device gp45|Escherichia phage Mu (Bacteriophage Mu)

Query: 4 HQGHRVR 10
H+GHR+R
Sbjct: 109 HEGHRIR 115


>sp|POL1_TORVR|RNA1 polyprotein|Tomato ringspot virus (isolate raspberry)

Query: 2 QEHQGHRV 9
Q+H+G+RV
Sbjct: 1019 QKHKGNRV 1026


>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)

Query: 4 HQGHR 8
HQGHR
Sbjct: 2755 HQGHR 2759




82|Sequence|406|415|GHRVRPIEEV

>sp|L_MOKV|LARGE structural protein|Mokola virus (MOKV)

Query: 4 VRPIEEV 10
+RPIEEV
Sbjct: 1321 IRPIEEV 1327


>sp|CVC2_GAHVM|CAPSID vertex component 2|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 3 RVRPIEE 9
R+RPIEE
Sbjct: 83 RLRPIEE 89


>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)

Query: 3 RVRPIEE 9
R+RPIE+
Sbjct: 83 RIRPIEQ 89


>sp|APE_ASFK5|PROBABLE AP endonuclease|African swine fever virus (isolate

Query: 3 RVRPIEEV 10
+++P+EEV
Sbjct: 130 KIKPVEEV 137


>sp|CORE5_ADE05|CORE-CAPSID bridging protein|Human adenovirus C serotype 5

Query: 3 RVRPIEEV 10
RVRPI++V
Sbjct: 200 RVRPIKQV 207


>sp|CORE5_ADE02|CORE-CAPSID bridging protein|Human adenovirus C serotype 2

Query: 3 RVRPIEEV 10
RVRPI++V
Sbjct: 201 RVRPIKQV 208




83|Sequence|411|420|PIEEVALEHK

>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 2 IEEVALEHK 10
IEEVAL H+
Sbjct: 1366 IEEVALGHE 1374


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 IEEVALEHK 10
IEEVAL H+
Sbjct: 1366 IEEVALGHE 1374


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 IEEVALEHK 10
IEEVAL H+
Sbjct: 1366 IEEVALGHE 1374


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 2 IEEVALEHK 10
IEEVAL H+
Sbjct: 1366 IEEVALGHE 1374




84|Sequence|416|425|ALEHKKKIQK

>sp|36013_ASFK5|PROTEIN MGF 360-13L|African swine fever virus (isolate

Query: 4 HKKKIQ 9
HKKKIQ
Sbjct: 228 HKKKIQ 233




85|Sequence|421|430|KKIQKQLEHL

>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 1 KKIQKQLEH 9
+K +KQLEH
Sbjct: 784 QKKEKQLEH 792


>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)

Query: 1 KKIQKQLEH 9
+K +KQLEH
Sbjct: 784 QKKEKQLEH 792




86|Sequence|426|435|QLEHLKKLRK

>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14

Query: 1 QLEHLKKLRK 10
Q+EH + LRK
Sbjct: 29 QIEHWQTLRK 38


>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20

Query: 1 QLEHLKKLRK 10
Q+EH + LRK
Sbjct: 29 QIEHWQTLRK 38


>sp|KITH_FHV1|THYMIDINE kinase|Feline herpesvirus 1 (FeHV-1) (Feline

Query: 3 EHLKKLR 9
EHLK+LR
Sbjct: 184 EHLKRLR 190


>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21

Query: 1 QLEHLKKLRK 10
Q+EH + LRK
Sbjct: 29 QIEHWQTLRK 38


>sp|CAPSD_PZSVT|CAPSID protein|Pelargonium zonate spot virus (isolate

Query: 2 LEHLKKLR 9
+EHL KLR
Sbjct: 164 VEHLAKLR 171


>sp|VE2_HPV49|REGULATORY protein E2|Human papillomavirus type 49

Query: 1 QLEHLKKLRK 10
Q+EH K LR+
Sbjct: 29 QIEHWKLLRQ 38


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 2 LEHLKKLRK 10
L+HLKK+ K
Sbjct: 369 LDHLKKVYK 377




87|Sequence|431|440|KKLRKSGEEQ

>sp|RDRP_CMVAS|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain As)

Query: 2 KLRKSGEE 9
K RKSGEE
Sbjct: 717 KYRKSGEE 724


>sp|VP3_ROTSH|PROTEIN VP3|Rotavirus A (isolate RVA/Monkey/South

Query: 1 KKLRKSGEEQ 10
KK RK+ EEQ
Sbjct: 351 KKWRKTVEEQ 360


>sp|VP3_ROTS1|PROTEIN VP3|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)

Query: 1 KKLRKSGEEQ 10
KK RK+ EEQ
Sbjct: 351 KKWRKTVEEQ 360


>sp|Y147_TNAVC|STRUCTURAL protein ORF147|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 3 LRKSGEEQ 10
LRKSG++Q
Sbjct: 181 LRKSGDDQ 188


>sp|RDRP_CMVFN|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain FNY)

Query: 2 KLRKSGEE 9
K +KSGEE
Sbjct: 717 KYKKSGEE 724


>sp|RDRP_CMVY|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Y)

Query: 2 KLRKSGEE 9
K +KSGEE
Sbjct: 717 KYKKSGEE 724


>sp|RDRP_CMVMB|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain MB-8)

Query: 2 KLRKSGEE 9
K +KSGEE
Sbjct: 717 KYKKSGEE 724


>sp|RDRP_CMVKO|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Kor)

Query: 2 KLRKSGEE 9
K +KSGEE
Sbjct: 717 KYKKSGEE 724


>sp|RDRP_CMVII|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Iizuka)

Query: 2 KLRKSGEE 9
K +KSGEE
Sbjct: 717 KYKKSGEE 724




88|Sequence|436|445|SGEEQRSYGE

>sp|L_ALLVP|RNA-DIRECTED RNA polymerase L|Allpahuayo mammarenavirus (isolate

Query: 1 SGEEQRSYG 9
+GE+ R+YG
Sbjct: 538 TGEKSRAYG 546


>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)

Query: 2 GEEQRSYG 9
GE++R YG
Sbjct: 113 GEDERFYG 120




89|Sequence|441|450|RSYGEEKAVS

>sp|BRLF1_SHV21|PUTATIVE transcription activator BRLF1 homolog|Saimiriine herpesvirus 2

Query: 1 RSYGEEKAV 9
R+YG EK+V
Sbjct: 176 RNYGTEKSV 184




90|Sequence|446|455|EKAVSFLKQT

>sp|PP220_ASFWA|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 EKAVSFLKQT 10
EKAV+ L+QT
Sbjct: 342 EKAVNLLRQT 351


>sp|PP220_ASFP4|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 EKAVSFLKQT 10
EKAV+ L+QT
Sbjct: 342 EKAVNLLRQT 351


>sp|PP220_ASFM2|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 EKAVSFLKQT 10
EKAV+ L+QT
Sbjct: 342 EKAVNLLRQT 351


>sp|PP220_ASFB7|POLYPROTEIN pp220|African swine fever virus (strain

Query: 1 EKAVSFLKQT 10
EKAV+ L+QT
Sbjct: 342 EKAVNLLRQT 351


>sp|PP220_ASFK5|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 EKAVSFLKQT 10
EKAV+ L+QT
Sbjct: 342 EKAVNLLRQT 351




91|Sequence|451|460|FLKQTEALKQ

>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 FLKQTEALKQ 10
FL+Q E L+Q
Sbjct: 545 FLEQLEGLRQ 554




92|Sequence|456|465|EALKQRVQRK

>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1 EALKQRVQR 9
EA+K+RV+R
Sbjct: 2782 EAIKERVER 2790


>sp|NCAP_WWAVU|NUCLEOPROTEIN Arroyo mammarenavirus (isolate Rat/United

Query: 1 EALKQRVQR 9
E LKQ+VQR
Sbjct: 106 EKLKQKVQR 114




93|Sequence|461|470|RVQRKLEQVY

>sp|ENV_BAEVM|ENVELOPE glycoprotein|Baboon endogenous virus (strain M7)

Query: 2 VQRKLEQVY 10
VQRKLE+++
Sbjct: 179 VQRKLEEIH 187


>sp|PRO_ADEM1|PROTEASE adenovirus A serotype 1

Query: 4 RKLEQVY 10
RKL+QVY
Sbjct: 77 RKLQQVY 83


>sp|L_TACVF|RNA-DIRECTED RNA polymerase L|Tacaribe virus (strain Franze-Fernandez) (TCRV)

Query: 1 RVQRKLEQVY 10
R+QRK+E ++
Sbjct: 1475 RLQRKIESIF 1484


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 1 RVQRKLEQVY 10
R+QRK+E ++
Sbjct: 1476 RLQRKIEAIF 1485


>sp|L_PARVP|RNA-DIRECTED RNA polymerase L|Parana mammarenavirus (isolate

Query: 1 RVQRKLEQVY 10
R+QR +E VY
Sbjct: 1460 RLQRSVENVY 1469


>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)

Query: 1 RVQRKLEQ 8
R QRKLEQ
Sbjct: 712 REQRKLEQ 719


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1 RVQRKLEQVY 10
R+QRK+E ++
Sbjct: 1475 RLQRKIEAIF 1484


>sp|DPOL_ADES1|DNA polymerase|Snake adenovirus serotype 1 (SnAdV-1)

Query: 3 QRKLEQVY 10
QRKL+ VY
Sbjct: 878 QRKLKSVY 885




94|Sequence|466|475|LEQVYYFLEQ

>sp|CHMA_BPGOS|CHIMALLIN phage vB_EcoM_Goslar

Query: 2 EQVYYFLEQ 10
EQ+Y FL+Q
Sbjct: 396 EQIYKFLQQ 404


>sp|PRO_ADE02|PROTEASE adenovirus C serotype 2

Query: 2 EQVYYFLEQ 10
EQ+Y FLE+
Sbjct: 172 EQLYSFLER 180


>sp|PRO_ADE05|PROTEASE adenovirus C serotype 5

Query: 2 EQVYYFLEQ 10
EQ+Y FLE+
Sbjct: 172 EQLYSFLER 180


>sp|PRIM_SHV21|DNA primase|Saimiriine herpesvirus 2 (strain 11)

Query: 1 LEQVYYFLEQ 10
L ++YF EQ
Sbjct: 174 LTAIFYFFEQ 183


>sp|MCP_ALHV1|MAJOR capsid protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 LEQVYYFL 8
LE++YY++
Sbjct: 798 LEKIYYYV 805


>sp|VP5_BTV2A|OUTER capsid protein VP5|Bluetongue virus 2 (isolate USA)

Query: 1 LEQVYYFL 8
LEQVY F+
Sbjct: 127 LEQVYEFM 134


>sp|Y148_TNAVC|UNCHARACTERIZED protein ORF148|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 1 LEQVYYFL 8
LEQVY F+
Sbjct: 65 LEQVYQFI 72




95|Sequence|471|480|YFLEQQEHFF

>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)

Query: 4 EQQEHFF 10
EQ+EHF+
Sbjct: 45 EQREHFY 51


>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 EQQEHFF 10
EQ+EHF+
Sbjct: 78 EQREHFY 84


>sp|GB_SUHVF|ENVELOPE glycoprotein B|Suid herpesvirus 1 (strain Indiana-Funkhauser

Query: 3 LEQQEH 8
LEQQEH
Sbjct: 871 LEQQEH 876


>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)

Query: 4 EQQEHFF 10
EQ+EHF+
Sbjct: 78 EQREHFY 84


>sp|RDRP_TRVPP|REPLICASE large subunit|Tobacco rattle virus (isolate PpK20)

Query: 4 EQQEHFF 10
EQ+ HFF
Sbjct: 20 EQRSHFF 26


>sp|PP220_ASFM2|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 2 FLEQQEHF 9
+LE +EHF
Sbjct: 1783 YLETEEHF 1790


>sp|PP220_ASFB7|POLYPROTEIN pp220|African swine fever virus (strain

Query: 2 FLEQQEHF 9
+LE +EHF
Sbjct: 1784 YLETEEHF 1791


>sp|194K_TRVSY|REPLICASE large subunit|Tobacco rattle virus (strain SYM)

Query: 4 EQQEHFF 10
EQ+ HFF
Sbjct: 20 EQRSHFF 26


>sp|PP220_ASFP4|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 2 FLEQQEHF 9
+LE +EHF
Sbjct: 1783 YLETEEHF 1790


>sp|PP220_ASFWA|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 2 FLEQQEHF 9
+LE +EHF
Sbjct: 1783 YLETEEHF 1790


>sp|YL520_MIMIV|PUTATIVE BTB/POZ domain-containing protein L520|Acanthamoeba polyphaga

Query: 1 YFLEQQEHFF 10
YFL++ H+F
Sbjct: 240 YFLDKDPHYF 249




96|Sequence|476|485|QEHFFVASLE

>sp|PG086_FOWPN|ENTRY-FUSION complex protein OPG086|Fowlpox virus (strain NVSL) (FPV)

Query: 2 EHFFVASL 9
EH FV+SL
Sbjct: 43 EHIFVSSL 50


>sp|TRM3_EHV1V|TRIPARTITE terminase subunit 3|Equine herpesvirus 1 (strain V592)

Query: 2 EHFFVASL 9
EHFF+++L
Sbjct: 541 EHFFLSAL 548


>sp|TRM3_EHV1B|TRIPARTITE terminase subunit 3|Equine herpesvirus 1 (strain Ab4p)

Query: 2 EHFFVASL 9
EHFF+++L
Sbjct: 541 EHFFLSAL 548




97|Sequence|481|490|VASLEDVGQM

>sp|GH_EHV2|ENVELOPE glycoprotein H|Equine herpesvirus 2 (strain 86/87)

Query: 1 VASLEDVGQ 9
VA LED GQ
Sbjct: 356 VAGLEDAGQ 364


>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 ASLEDVGQ 9
ASL+DVG+
Sbjct: 209 ASLDDVGR 216


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 ASLEDVGQ 9
ASL+DVG+
Sbjct: 209 ASLDDVGR 216




98|Sequence|486|495|DVGQMVGQIR

***** No hits found ******


99|Sequence|491|500|VGQIRKAYDT

>sp|RPB2_IIV6|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 6

Query: 1 VGQIRKAYD 9
+GQ+R AY+
Sbjct: 204 IGQLRNAYN 212


>sp|RPB2_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 1 VGQIRKAYD 9
+ Q+RKAY+
Sbjct: 179 ISQVRKAYN 187


>sp|TMP_BPPAJ|TAPE measure protein|Pseudomonas phage PAJU2

Query: 1 VGQIRKAYD 9
+ QIRK+Y+
Sbjct: 483 IAQIRKSYE 491




100|Sequence|496|505|KAYDTRVSQD

>sp|PG112_VAR67|LATE protein OPG112|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 4 DTRVSQD 10
DTR+SQD
Sbjct: 119 DTRISQD 125


>sp|H7_VARV|LATE protein H7|Variola virus

Query: 4 DTRVSQD 10
DTR+SQD
Sbjct: 119 DTRISQD 125


>sp|POL1_RCMV|RNA1 polyprotein|Red clover mottle virus (RCMV)

Query: 1 KAYDTRVSQ 9
KAY T +SQ
Sbjct: 853 KAYSTEISQ 861


>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 KAYDTRV 7
KAYDT V
Sbjct: 58 KAYDTEV 64


>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 KAYDTRV 7
KAYDT V
Sbjct: 58 KAYDTEV 64


>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 KAYDTRV 7
KAYDT V
Sbjct: 58 KAYDTEV 64


>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 KAYDTRV 7
KAYDT V
Sbjct: 58 KAYDTEV 64


>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 KAYDTRV 7
KAYDT V
Sbjct: 58 KAYDTEV 64


>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 KAYDTRV 7
KAYDT V
Sbjct: 59 KAYDTEV 65


>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 KAYDTRV 7
KAYDT V
Sbjct: 59 KAYDTEV 65


>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 KAYDTRV 7
KAYDT V
Sbjct: 58 KAYDTEV 64


>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 KAYDTRV 7
KAYDT V
Sbjct: 58 KAYDTEV 64


>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 KAYDTRV 7
KAYDT V
Sbjct: 59 KAYDTEV 65


>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 KAYDTRV 7
KAYDT V
Sbjct: 59 KAYDTEV 65


>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 KAYDTRV 7
KAYDT V
Sbjct: 58 KAYDTEV 64


>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 KAYDTRV 7
KAYDT V
Sbjct: 59 KAYDTEV 65


>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 KAYDTRV 7
KAYDT V
Sbjct: 58 KAYDTEV 64


>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 KAYDTRV 7
KAYDT V
Sbjct: 59 KAYDTEV 65


>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 KAYDTRV 7
KAYDT V
Sbjct: 59 KAYDTEV 65


>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1

Query: 1 KAYDTRV 7
KAYDT V
Sbjct: 58 KAYDTEV 64




101|Sequence|501|510|RVSQDIALLD

>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 RVSQDIALLD 10
R+ QD+ALLD
Sbjct: 1029 RLGQDLALLD 1038


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 RVSQDIALLD 10
R+ QD+ALLD
Sbjct: 1029 RLGQDLALLD 1038




102|Sequence|506|515|IALLDALIGE

>sp|VP3_LDCPR|PUTATIVE structural protein VP3|Lymantria dispar cypovirus 1 (isolate

Query: 1 IALLDALIGE 10
I+L+D L+GE
Sbjct: 1183 ISLMDDLMGE 1192


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 1 IALLDALIGE 10
+ ++DA+IGE
Sbjct: 2393 VKIIDAVIGE 2402


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 1 IALLDALIGE 10
+ ++DA+IGE
Sbjct: 2395 VKIIDAVIGE 2404


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 IALLDALIGE 10
+ ++DA++GE
Sbjct: 2376 VKIIDAVVGE 2385


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 IALLDALIGE 10
+ ++DA++GE
Sbjct: 2376 VKIIDAVVGE 2385


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 IALLDALIGE 10
+ ++DA++GE
Sbjct: 2382 VKIIDAVVGE 2391


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 IALLDALIGE 10
+ ++DA++GE
Sbjct: 2368 VKIIDAVVGE 2377


>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)

Query: 1 IALLDALIGE 10
+ ++DA++GE
Sbjct: 2380 VKIIDAVVGE 2389


>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum

Query: 1 IALLDALIGE 10
+AL D L+G+
Sbjct: 1668 VALCDTLVGD 1677




103|Sequence|511|520|ALIGELEAKE

>sp|VP16_GAHVM|TEGUMENT protein VP16 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 3 IGELEAKE 10
+GELEA+E
Sbjct: 180 LGELEARE 187


>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)

Query: 1 ALIGELEAKE 10
AL+GE E E
Sbjct: 532 ALVGEFETAE 541




104|Sequence|516|525|LEAKECQSEW

>sp|Y06D_BPT4|UNCHARACTERIZED 17.5 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 LEAKECQSEW 10
LEA + Q+EW
Sbjct: 46 LEADKLQTEW 55


>sp|RDRP_BANNV|RNA-DIRECTED RNA polymerase VP1|Banna virus (BAV)

Query: 2 EAKECQSEW 10
E+KE +EW
Sbjct: 284 ESKEVMTEW 292


>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)

Query: 1 LEAKECQSEW 10
+ AKE Q++W
Sbjct: 671 VSAKELQADW 680


>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)

Query: 1 LEAKECQSEW 10
+ AKE Q++W
Sbjct: 671 VSAKELQADW 680


>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)

Query: 1 LEAKECQSEW 10
+ AKE Q++W
Sbjct: 671 VSAKELQADW 680


>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)

Query: 1 LEAKECQSEW 10
+ AKE Q++W
Sbjct: 671 VSAKELQADW 680


>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)

Query: 1 LEAKECQSEW 10
+ AKE Q++W
Sbjct: 671 VSAKELQADW 680


>sp|YR106_MIMIV|UNCHARACTERIZED protein R106|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LEAKECQSEW 10
+ KE +SEW
Sbjct: 347 FKTKEIRSEW 356


>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9

Query: 1 LEAKECQSEW 10
L+ KEC S W
Sbjct: 9 LDPKECCSAW 18




105|Sequence|521|530|CQSEWELLQD

>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)

Query: 1 CQSEWELLQD 10
C+SEWE L +
Sbjct: 232 CESEWEALNN 241


>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 CQSEWELL 8
C+SEWE L
Sbjct: 232 CESEWEAL 239


>sp|PG049_VACCW|PROTEIN OPG049|Vaccinia virus (strain Western Reserve)

Query: 1 CQSEWELL 8
C+SEWE L
Sbjct: 233 CESEWEAL 240


>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 CQSEWELLQD 10
C+SEW+ L +
Sbjct: 233 CESEWKALNN 242


>sp|POLG_AEVL2|GENOME polyprotein|Avian encephalomyelitis virus (strain L2Z)

Query: 2 QSEWELL 8
QSEW+LL
Sbjct: 91 QSEWQLL 97


>sp|POLG_AEVVR|GENOME polyprotein|Avian encephalomyelitis virus (strain Van

Query: 2 QSEWELL 8
QSEW+LL
Sbjct: 91 QSEWQLL 97


>sp|POLG_AEVCA|GENOME polyprotein|Avian encephalomyelitis virus (strain Calnek

Query: 2 QSEWELL 8
QSEW+LL
Sbjct: 91 QSEWQLL 97


>sp|YR814_MIMIV|UNCHARACTERIZED protein R814|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 CQSEWELLQD 10
CQ +E++QD
Sbjct: 184 CQKNFEIIQD 193


>sp|UNG_EHV1V|URACIL-DNA glycosylase|Equine herpesvirus 1 (strain V592)

Query: 1 CQSEWE 6
CQS WE
Sbjct: 82 CQSSWE 87


>sp|UNG_EHV1B|URACIL-DNA glycosylase|Equine herpesvirus 1 (strain Ab4p)

Query: 1 CQSEWE 6
CQS WE
Sbjct: 82 CQSSWE 87


>sp|DPOL_ELHVK|DNA polymerase catalytic subunit|Elephantid herpesvirus 1 (isolate

Query: 1 CQSEWELLQ 9
C SE+EL++
Sbjct: 378 CASEYELIE 386


>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 CQSEWELLQD 10
C+S+W+ L +
Sbjct: 233 CESKWKALNN 242


>sp|MVP_ZYMVS|P3N-PIPO polyprotein|Zucchini yellow mosaic virus (strain

Query: 2 QSEWELLQD 10
+SEW L+D
Sbjct: 395 ESEWSTLRD 403


>sp|VG88_BPML5|GENE 88 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 5 WELLQD 10
WELL+D
Sbjct: 73 WELLRD 78


>sp|VG88_BPMD2|GENE 88 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 5 WELLQD 10
WELL+D
Sbjct: 73 WELLRD 78


>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 2 QSEWELLQD 10
+SEW L+D
Sbjct: 395 ESEWSTLRD 403


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 1 CQSEWELLQD 10
C+++W LL +
Sbjct: 993 CENKWVLLHN 1002


>sp|Y069_OSHVF|UNCHARACTERIZED protein ORF69|Ostreid herpesvirus 1 (isolate France)

Query: 4 EWELLQD 10
+WEL++D
Sbjct: 255 DWELIED 261


>sp|POL_SRV2|GAG-PRO-POL polyprotein|Simian retrovirus SRV-2

Query: 4 EWELLQD 10
+W LLQD
Sbjct: 981 KWRLLQD 987


>sp|POL_BAEVM|GAG-POL polyprotein|Baboon endogenous virus (strain M7)

Query: 1 CQSEWELLQ 9
C SEW L
Sbjct: 39 CSSEWPTLH 47


>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 4 EWELLQD 10
+W LLQD
Sbjct: 936 KWRLLQD 942


>sp|POL_SRV1|GAG-PRO-POL polyprotein|Simian retrovirus SRV-1

Query: 4 EWELLQD 10
+W LLQD
Sbjct: 985 KWRLLQD 991


>sp|POL_MPMV|GAG-PRO-POL polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian

Query: 4 EWELLQD 10
+W LLQD
Sbjct: 984 KWRLLQD 990




106|Sequence|526|535|ELLQDIGDIL

>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 ELLQDIGDIL 10
E +++IGD+L
Sbjct: 92 EFIEEIGDVL 101


>sp|MATRX_NDVA|MATRIX protein|Newcastle disease virus (strain

Query: 2 LLQDIGD 8
+LQDIGD
Sbjct: 26 VLQDIGD 32


>sp|CP51_MIMIV|PROBABLE lanosterol 14-alpha demethylase|Acanthamoeba polyphaga mimivirus

Query: 4 QDIGDIL 10
QDIGDI+
Sbjct: 275 QDIGDIV 281


>sp|RDRP_WCMVO|RNA replication protein|White clover mosaic virus (strain

Query: 2 LLQDIGDIL 10
L DIGDIL
Sbjct: 927 LKHDIGDIL 935


>sp|RDRP_WCMVM|RNA replication protein|White clover mosaic virus (strain

Query: 2 LLQDIGDIL 10
L DIGDIL
Sbjct: 927 LKHDIGDIL 935


>sp|SEA_AVIET|TYROSINE-PROTEIN kinase transforming protein SEA|Avian erythroblastosis virus

Query: 1 ELLQDIGDIL 10
ELL+++ DIL
Sbjct: 43 ELLEEVKDIL 52


>sp|SHUT_ADEG1|SHUTOFF protein|Fowl adenovirus A serotype 1

Query: 1 ELLQDIGDI 9
EL +DIGD+
Sbjct: 46 ELPEDIGDL 54


>sp|RDRP_NMV|RNA replication protein|Narcissus mosaic virus (NMV)

Query: 4 QDIGDIL 10
+DIGDIL
Sbjct: 1230 RDIGDIL 1236


>sp|MVP_RRSVT|MOVEMENT and RNA silencing protein|Rice ragged stunt virus (isolate

Query: 1 ELLQDIGD 8
EL+Q +GD
Sbjct: 293 ELMQSVGD 300


>sp|RDRP_PNLV|PROTEIN P2-P3|Poinsettia latent virus (isolate Euphorbia

Query: 1 ELLQDIGDIL 10
+ L D+GD+L
Sbjct: 494 QYLSDVGDLL 503


>sp|P1_PNLV|GENOME-LINKED protein precursor|Poinsettia latent virus (isolate Euphorbia

Query: 1 ELLQDIGDIL 10
+ L D+GD+L
Sbjct: 494 QYLSDVGDLL 503


>sp|OPEP2_NPVOP|OPEP-2 protein|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 1 ELLQDIGD 8
E+LQD GD
Sbjct: 71 EILQDAGD 78


>sp|RDRP_ICRSV|RNA replication protein|Indian citrus ringspot virus (isolate

Query: 2 LLQDIGDIL 10
+ DIGDIL
Sbjct: 1293 MASDIGDIL 1301


>sp|RDRP_SMYEA|RNA replication protein|Strawberry mild yellow edge-associated virus

Query: 2 LLQDIGDIL 10
L +DIGD+L
Sbjct: 961 LKKDIGDLL 969




107|Sequence|531|540|IGDILHRAKT

>sp|YL352_MIMIV|UNCHARACTERIZED protein L352|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GDILHRAK 9
GDI+ RAK
Sbjct: 139 GDIVQRAK 146


>sp|NS1AB_ANV1|NON-STRUCTURAL polyprotein 1AB|Avian nephritis virus 1 (ANV-1)

Query: 2 GDILHRAKT 10
GDI+ +AKT
Sbjct: 923 GDIILKAKT 931


>sp|NS1A_ANV1|NON-STRUCTURAL polyprotein 1A|Avian nephritis virus 1 (ANV-1)

Query: 2 GDILHRAKT 10
GDI+ +AKT
Sbjct: 923 GDIILKAKT 931




108|Sequence|536|545|HRAKTVPVPE

>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)

Query: 1 HRAKTVPVPE 10
HRAK VPE
Sbjct: 312 HRAKNARVPE 321


>sp|HELI_EHV2|DNA replication helicase|Equine herpesvirus 2 (strain 86/87)

Query: 3 AKTVPVPE 10
AKTVP PE
Sbjct: 30 AKTVPPPE 37


>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)

Query: 2 RAKTVPVP 9
RAK VP P
Sbjct: 636 RAKIVPTP 643


>sp|HRF1_NPVLD|HOST range factor 1|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 2 RAKTVPVPE 10
R + VPVPE
Sbjct: 72 RDRVVPVPE 80


>sp|P1_PLRV1|PROTEIN P1|Potato leafroll virus (strain Potato/Scotland/strain

Query: 2 RAKTVPVPE 10
RA T P PE
Sbjct: 595 RATTTPAPE 603


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 4 KTVPVPE 10
KTVP PE
Sbjct: 1466 KTVPPPE 1472


>sp|RLIG_BPRHR|RNA ligase|Rhodothermus phage RM378 (Bacteriophage RM378)

Query: 1 HRAKTVPVPE 10
HR KT PE
Sbjct: 321 HRIKTTITPE 330


>sp|MVP_AMVYS|MOVEMENT protein|Alfalfa mosaic virus (strain YSMV)

Query: 2 RAKTVPVPE 10
+AKTV +PE
Sbjct: 246 KAKTVFIPE 254


>sp|RDRP_TNVA|RNA-DIRECTED RNA polymerase|Tobacco necrosis virus (strain A)

Query: 1 HRAKTVPVPE 10
HR VP PE
Sbjct: 663 HRVARVPSPE 672




109|Sequence|541|550|VPVPEKWTTP

>sp|HRF1_NPVLD|HOST range factor 1|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 1 VPVPEKW 7
VPVPE+W
Sbjct: 76 VPVPEEW 82


>sp|PG144_MONPV|VIRION membrane protein OPG144 precursor|Monkeypox virus (MPXV)

Query: 1 VPVPEKWT 8
VP+PE++T
Sbjct: 171 VPIPEQYT 178


>sp|FES_FSVGA|TYROSINE-PROTEIN kinase transforming protein Fes|Feline sarcoma virus (strain

Query: 3 VPEKWTTP 10
VP KWT P
Sbjct: 509 VPVKWTAP 516


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 1 VPVPEKW 7
PVPEKW
Sbjct: 743 APVPEKW 749


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 1 VPVPEKW 7
PVPEKW
Sbjct: 743 APVPEKW 749


>sp|NSP4_RGDV|NON-STRUCTURAL protein 4|Rice gall dwarf virus (RGDV)

Query: 1 VPVPEKWTT 9
VPV +KW T
Sbjct: 458 VPVTKKWNT 466


>sp|SEGB_BPT4|PUTATIVE endonuclease segB|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 PVPEKW 7
P+PE W
Sbjct: 208 PIPEGW 213


>sp|SPIKE_CVRSD|SPIKE glycoprotein|Rat coronavirus (strain 681) (RCV-SDAV)

Query: 1 VPVPEKWTTP 10
V P+ W TP
Sbjct: 253 VSSPQYWVTP 262


>sp|FES_FSVST|TYROSINE-PROTEIN kinase transforming protein Fes|Feline sarcoma virus (strain

Query: 3 VPEKWTTP 10
VP KWT P
Sbjct: 377 VPVKWTAP 384


>sp|DPOL_CEV01|DNA polymerase|Chrysochromulina ericina virus (CeV01)

Query: 5 EKWTTP 10
EKWT P
Sbjct: 1590 EKWTEP 1595


>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)

Query: 1 VPVPEKW 7
+P PE+W
Sbjct: 30 LPFPEEW 36


>sp|FPS_FUJSV|TYROSINE-PROTEIN kinase transforming protein Fps|Fujinami sarcoma virus (FSV)

Query: 3 VPEKWTTP 10
+P KWT P
Sbjct: 773 IPVKWTAP 780


>sp|POL1_TBRVM|RNA1 polyprotein|Tomato black ring virus (strain

Query: 1 VPVPEKWTTP 10
VPVPE P
Sbjct: 1479 VPVPESLRVP 1488


>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 1 VPVPEKW 7
VP+PEK+
Sbjct: 1512 VPIPEKY 1518


>sp|YL567_MIMIV|UNCHARACTERIZED protein L567|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 PVPEKWTT 9
P P +WT+
Sbjct: 240 PFPNQWTS 247


>sp|CAPSD_APRVF|INNER capsid protein VP3|Aedes pseudoscutellaris reovirus (isolate

Query: 1 VPVPEKWTTP 10
+P P+ + TP
Sbjct: 802 IPTPDNFITP 811


>sp|FPS_AVISP|TYROSINE-PROTEIN kinase transforming protein Fps|Avian sarcoma virus (strain PRCII)

Query: 3 VPEKWTTP 10
+P KWT P
Sbjct: 433 IPVKWTAP 440


>sp|VIE3_HCMVT|30 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)

Query: 2 PVPEKWTTP 10
P+P W+TP
Sbjct: 270 PLPSSWSTP 278


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 2 PVPEKWTT 9
PVP++W T
Sbjct: 1458 PVPDRWPT 1465


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 2 PVPEKWTT 9
PVP++W T
Sbjct: 1458 PVPDRWPT 1465


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 2 PVPEKWTT 9
PVP++W T
Sbjct: 1458 PVPDRWPT 1465


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 2 PVPEKWTT 9
PVP++W T
Sbjct: 1458 PVPDRWPT 1465


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 2 PVPEKWTT 9
PVP++W T
Sbjct: 1458 PVPDRWPT 1465


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 2 PVPEKWTT 9
PVP++W T
Sbjct: 1458 PVPDRWPT 1465


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 2 PVPEKWTT 9
PVP++W T
Sbjct: 1458 PVPDRWPT 1465


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 2 PVPEKWTT 9
PVP++W T
Sbjct: 1458 PVPDRWPT 1465


>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 VPVPEKW 7
VP P KW
Sbjct: 85 VPTPAKW 91


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 2 PVPEKWTT 9
PVP++W T
Sbjct: 1458 PVPDRWPT 1465


>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)

Query: 1 VPVPEKW 7
VP P KW
Sbjct: 85 VPTPAKW 91


>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant

Query: 1 VPVPEKW 7
VP P KW
Sbjct: 85 VPTPAKW 91


>sp|H962R_ASFK5|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 4 PEKWTT 9
PEKW T
Sbjct: 347 PEKWNT 352


>sp|PORTL_LAMBD|PORTAL protein B|Escherichia phage lambda (Bacteriophage lambda)

Query: 3 VPEKWT 8
+P+KWT
Sbjct: 215 MPQKWT 220




110|Sequence|546|555|KWTTPQEIKQ

>sp|TOP2_IIV6|DNA topoisomerase 2|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 KWTTPQEIKQ 10
KWT+ QE+KQ
Sbjct: 387 KWTSVQELKQ 396


>sp|SPHR_AMEPV|SPHEROIDIN moorei entomopoxvirus (AmEPV)

Query: 2 WTTPQEIK 9
W TP E K
Sbjct: 568 WVTPHEAK 575


>sp|3004L_ASFM2|PROTEIN MGF 300-4L|African swine fever virus (isolate

Query: 4 TPQEIKQ 10
TP+EIKQ
Sbjct: 113 TPKEIKQ 119


>sp|NSP4_WTV|NON-STRUCTURAL protein 4|Wound tumor virus (WTV)

Query: 1 KWTTPQEIK 9
KW P+++K
Sbjct: 158 KWAVPEDLK 166


>sp|RPB1_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 4 TPQEIKQ 10
+PQEIKQ
Sbjct: 1124 SPQEIKQ 1130


>sp|C_MEASI|PROTEIN C|Measles virus (strain IP-3-Ca) (MeV)

Query: 2 WTTPQEIKQ 10
W +PQEI +
Sbjct: 86 WDSPQEISR 94


>sp|REPC_BPMU|REPRESSOR protein c|Escherichia phage Mu (Bacteriophage Mu)

Query: 2 WTTPQEI 8
W +PQEI
Sbjct: 16 WCSPQEI 22


>sp|PCPP_BPT4|PROHEAD core protein protease|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 WTTPQEIKQ 10
W TP+EI +
Sbjct: 179 WVTPKEITE 187


>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 2 WTTPQEIK 9
W TPQ+ K
Sbjct: 1891 WLTPQKSK 1898


>sp|DAM_BPT1|DNA N-6-adenine-methyltransferase|Escherichia phage T1 (Bacteriophage

Query: 2 WTTPQEI 8
W+TP+E+
Sbjct: 59 WSTPREV 65


>sp|NSS_TOSV|NON-STRUCTURAL protein NS-S|Toscana virus (Tos)

Query: 2 WTTPQE 7
W TPQE
Sbjct: 283 WPTPQE 288


>sp|C_MEASC|PROTEIN C|Measles virus (strain Ichinose-B95a) (MeV)

Query: 2 WTTPQEIKQ 10
W +PQEI +
Sbjct: 86 WESPQEISR 94


>sp|Y082_OSHVF|UNCHARACTERIZED protein ORF82|Ostreid herpesvirus 1 (isolate France)

Query: 1 KWTTPQEIK 9
+++TP+E+K
Sbjct: 176 RYSTPEEVK 184


>sp|G1P_BPPHL|GENE 1 protein|Xanthomonas phage phiLf (Bacteriophage phi-Lf)

Query: 1 KWTTPQEIK 9
KW P E K
Sbjct: 80 KWCIPDEFK 88




111|Sequence|551|560|QEIKQKIQLL

***** No hits found ******


112|Sequence|556|565|KIQLLHQKSE

>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 3 QLLHQKSE 10
QLLHQ+SE
Sbjct: 137 QLLHQESE 144




113|Sequence|561|570|HQKSEFVEKS

>sp|POLG_LMV0|GENOME polyprotein|Lettuce mosaic virus (strain 0

Query: 2 QKSEFVEKS 10
QK+E +EKS
Sbjct: 1071 QKNELIEKS 1079


>sp|POLG_LMVE|GENOME polyprotein|Lettuce mosaic virus (strain E)

Query: 2 QKSEFVEKS 10
QK+E +EKS
Sbjct: 1071 QKNELIEKS 1079




114|Sequence|566|575|FVEKSTKYFS

>sp|DPOL_WMHBV|PROTEIN P|Woolly monkey hepatitis B virus

Query: 1 FVEKSTKYF 9
F K+TKYF
Sbjct: 114 FYPKATKYF 122


>sp|DPOL_WHV1|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 FVEKSTKYF 9
F K+TKYF
Sbjct: 120 FFPKATKYF 128


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 1 FVEKSTKYF 9
F K+TKYF
Sbjct: 115 FYPKATKYF 123


>sp|DPOL_WHV3|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 FVEKSTKYF 9
F K+TKYF
Sbjct: 120 FFPKATKYF 128


>sp|DPOL_WHV5|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 FVEKSTKYF 9
F K+TKYF
Sbjct: 120 FFPKATKYF 128


>sp|DPOL_WHV4|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 FVEKSTKYF 9
F K+TKYF
Sbjct: 120 FFPKATKYF 128


>sp|DPOL_WHV2|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 FVEKSTKYF 9
F K+TKYF
Sbjct: 119 FFPKATKYF 127


>sp|RIR1_BHV1C|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Bovine herpesvirus 1.1 (strain Cooper)

Query: 1 FVEKSTKYF 9
FVE S +YF
Sbjct: 114 FVEVSLRYF 122


>sp|DPOL_ASHV|PROTEIN P|Arctic squirrel hepatitis virus (ASHV)

Query: 1 FVEKSTKYF 9
F K+TKYF
Sbjct: 119 FFPKATKYF 127


>sp|POLG_FCVF4|GENOME polyprotein|Feline calicivirus (strain Japanese F4)

Query: 2 VEKSTKYFS 10
+ K+TK+FS
Sbjct: 311 ISKATKFFS 319


>sp|DPOL_HBVOR|PROTEIN P|Orangutan hepatitis B virus (isolate

Query: 1 FVEKSTKYF 9
F STKYF
Sbjct: 115 FYPNSTKYF 123


>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate

Query: 1 FVEKSTKYF 9
++EKS+ YF
Sbjct: 2264 YIEKSSPYF 2272


>sp|5052R_ASFK5|PROTEIN MGF 505-2R|African swine fever virus (isolate

Query: 2 VEKSTKYFS 10
+EK+ +YFS
Sbjct: 340 LEKTVRYFS 348


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 FVEKSTKYF 9
FVE TKY+
Sbjct: 667 FVELCTKYY 675


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 FVEKSTKYF 9
FVE TKY+
Sbjct: 667 FVELCTKYY 675




115|Sequence|571|580|TKYFSETLRS

>sp|P3_RDVA|OUTER capsid protein P3|Rice dwarf virus (isolate Akita)

Query: 2 KYFSETLRS 10
KYF+E++RS
Sbjct: 719 KYFTESMRS 727


>sp|P3_RDVF|OUTER capsid protein P3|Rice dwarf virus (isolate Fujian)

Query: 2 KYFSETLRS 10
KYF+E++RS
Sbjct: 719 KYFTESMRS 727


>sp|P3_RGDV|OUTER capsid protein P3|Rice gall dwarf virus (RGDV)

Query: 1 TKYFSETLRS 10
TKYF++ +RS
Sbjct: 719 TKYFTDDMRS 728


>sp|VP91_NPVOP|CAPSID-ASSOCIATED protein Vp91|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 3 YFSETLR 9
YF ETLR
Sbjct: 237 YFPETLR 243


>sp|YL116_MIMIV|UNCHARACTERIZED protein L116|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 TKYFSETLR 9
T+YFSE R
Sbjct: 330 TRYFSEKAR 338


>sp|POL1_CRLVP|RNA1 polyprotein|Cherry rasp leaf virus (isolate

Query: 1 TKYFSETLRS 10
TKY +E +RS
Sbjct: 553 TKYCNEAIRS 562




116|Sequence|576|585|ETLRSEMEMF

***** No hits found ******


117|Sequence|581|590|EMEMFNVPEL

>sp|TEV3_BPR03|INTRON-ASSOCIATED endonuclease 3|Enterobacteria phage RB3 (Bacteriophage RB3)

Query: 1 EMEMFNVPEL 10
E+++FN+PE+
Sbjct: 87 EIQIFNIPEV 96


>sp|DCTD_BPT2|DEOXYCYTIDYLATE deaminase|Enterobacteria phage T2 (Bacteriophage T2)

Query: 2 MEMFNVPEL 10
+E+FNVP+L
Sbjct: 169 IEVFNVPKL 177


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 1 EMEMFNVP 8
+MEMF +P
Sbjct: 394 QMEMFRIP 401


>sp|PG060_VACCP|PROTEIN OPG060|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 EMEMFNVPEL 10
+ME+FNV EL
Sbjct: 11 KMEIFNVEEL 20


>sp|PG060_MONPV|PROTEIN OPG060|Monkeypox virus (MPXV)

Query: 1 EMEMFNVPEL 10
+ME+FNV EL
Sbjct: 11 KMEIFNVEEL 20


>sp|RDRP_THOGV|RNA-DIRECTED RNA polymerase catalytic subunit|Thogoto virus (isolate SiAr 126)

Query: 2 MEMFNVP 8
ME+FN+P
Sbjct: 332 MELFNIP 338


>sp|PG060_VACCC|PROTEIN OPG060|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 EMEMFNVPEL 10
+ME+FNV EL
Sbjct: 11 KMEIFNVEEL 20


>sp|DCTD_BPT4|DEOXYCYTIDYLATE deaminase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 MEMFNVPE 9
+E+FNVP+
Sbjct: 169 IEVFNVPK 176


>sp|VF602_ASFB7|PROTEIN B602L|African swine fever virus (strain

Query: 2 MEMFNVPE 9
+EM NVP+
Sbjct: 569 LEMLNVPD 576


>sp|VG23_BPML5|MAJOR tail protein Gp23|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 3 EMFNVPEL 10
++FNVPE+
Sbjct: 188 DLFNVPEV 195


>sp|PG060_VACCW|PROTEIN OPG060|Vaccinia virus (strain Western Reserve)

Query: 2 MEMFNVPEL 10
ME+FNV EL
Sbjct: 1 MEIFNVEEL 9


>sp|PG060_VARV|PROTEIN OPG060|Variola virus

Query: 1 EMEMFNVPEL 10
+ME+FNV EL
Sbjct: 14 KMEIFNVEEL 23


>sp|PG060_VAR67|PROTEIN OPG060|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 EMEMFNVPEL 10
+ME+FNV EL
Sbjct: 14 KMEIFNVEEL 23


>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 1 EMEMFNVPE 9
E E F++PE
Sbjct: 1305 EREFFDIPE 1313


>sp|VF602_ASFP4|PROTEIN B602L|African swine fever virus (isolate

Query: 2 MEMFNVPE 9
+EM NVP+
Sbjct: 537 LEMLNVPD 544


>sp|L_IHNVO|RNA-DIRECTED RNA polymerase L|Infectious hematopoietic necrosis virus (strain

Query: 1 EMEMFNVPE 9
E E F++PE
Sbjct: 1305 EREFFDIPE 1313


>sp|VF602_ASFM2|PROTEIN B602L|African swine fever virus (isolate

Query: 2 MEMFNVPE 9
+EM NVP+
Sbjct: 581 LEMLNVPD 588


>sp|L_IHNVW|RNA-DIRECTED RNA polymerase L|Infectious hematopoietic necrosis virus (strain

Query: 1 EMEMFNVPE 9
E E F++PE
Sbjct: 1305 EREFFDIPE 1313


>sp|Y326A_ATV|STRUCTURAL protein ORF326a|Acidianus two-tailed virus (ATV)

Query: 3 EMFNVPE 9
E FNVPE
Sbjct: 306 ESFNVPE 312


>sp|VF602_ASFK5|PROTEIN B602L|African swine fever virus (isolate

Query: 2 MEMFNVPE 9
+EM NVP+
Sbjct: 510 LEMLNVPD 517


>sp|VF602_ASFWA|PROTEIN B602L|African swine fever virus (isolate

Query: 2 MEMFNVPE 9
+EM NVP+
Sbjct: 517 LEMLNVPD 524




118|Sequence|586|595|NVPELIGAQA

>sp|YR831_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R831|Acanthamoeba

Query: 1 NVPELIG 7
N+PE++G
Sbjct: 451 NIPEIVG 457


>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 NVPELIGAQ 9
+VPE++GA+
Sbjct: 929 SVPEVLGAR 937


>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 NVPELIGAQ 9
+VPE++GA+
Sbjct: 929 SVPEVLGAR 937




119|Sequence|591|600|IGAQAHAVNV

>sp|OBP_BHV1C|REPLICATION origin-binding protein|Bovine herpesvirus 1.1 (strain Cooper)

Query: 1 IGAQAHAVNV 10
+GA AHAV+V
Sbjct: 726 LGAAAHAVSV 735




120|Sequence|596|605|HAVNVILDAE

>sp|VF295_IIV6|UNCHARACTERIZED protein 295L|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 VNVILDAE 10
+NVILD E
Sbjct: 62 INVILDIE 69




121|Sequence|601|610|ILDAETAYPN

>sp|TGB1_FXMV|MOVEMENT and silencing protein TGBp1|Foxtail mosaic virus

Query: 1 ILDAETAYPN 10
ILD AYPN
Sbjct: 81 ILDEYPAYPN 90


>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human

Query: 3 DAETAYPN 10
D E AYPN
Sbjct: 290 DGEHAYPN 297


>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human

Query: 3 DAETAYPN 10
D E AYPN
Sbjct: 289 DGEHAYPN 296


>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human

Query: 3 DAETAYPN 10
D E AYPN
Sbjct: 289 DGEHAYPN 296


>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 3 DAETAYPN 10
D E AYPN
Sbjct: 290 DGEHAYPN 297


>sp|TIPJ_LAMBD|TIP attachment protein J|Escherichia phage lambda (Bacteriophage

Query: 1 ILDAETAYPN 10
I+D + YPN
Sbjct: 205 IIDVKQCYPN 214


>sp|DPOL_MIMIV|DNA polymerase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 ILDAETAYPN 10
+LD + YPN
Sbjct: 711 VLDYSSLYPN 720


>sp|VP1_SV40|MAJOR capsid protein VP1|Simian virus 40 (SV40)

Query: 1 ILDAETAYP 9
+LD + AYP
Sbjct: 197 VLDKDNAYP 205




122|Sequence|606|615|TAYPNLIFSD

>sp|Y067_OSHVF|UNCHARACTERIZED protein ORF67|Ostreid herpesvirus 1 (isolate France)

Query: 2 AYPNLIF 8
AYPN++F
Sbjct: 514 AYPNIVF 520


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 AYPNLIF 8
AYP LIF
Sbjct: 880 AYPELIF 886


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 3 YPNLIFSD 10
Y N+IFSD
Sbjct: 2214 YANVIFSD 2221


>sp|CP_CSVMV|PUTATIVE Polyprotein CP|Cassava vein mosaic virus (CsVMV)

Query: 1 TAYPNLIFSD 10
T YP LI D
Sbjct: 286 TVYPTLIIPD 295


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 3 YPNLIFSD 10
Y N+IFSD
Sbjct: 2214 YANVIFSD 2221


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 3 YPNLIFSD 10
Y N+IFSD
Sbjct: 2214 YANVIFSD 2221


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 3 YPNLIFSD 10
Y N+IFSD
Sbjct: 2214 YANVIFSD 2221


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 3 YPNLIFSD 10
Y N+IFSD
Sbjct: 2214 YANVIFSD 2221


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 3 YPNLIFSD 10
Y N+IFSD
Sbjct: 2214 YANVIFSD 2221


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 3 YPNLIFSD 10
Y N+IFSD
Sbjct: 2214 YANVIFSD 2221


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 3 YPNLIFSD 10
Y N+IFSD
Sbjct: 2214 YANVIFSD 2221


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 3 YPNLIFSD 10
Y N+IFSD
Sbjct: 2214 YANVIFSD 2221


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3 YPNLIFSD 10
Y N+IFSD
Sbjct: 2214 YANVIFSD 2221


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 2 AYPNLIF 8
YPNLI+
Sbjct: 620 GYPNLIY 626


>sp|US03_EHV1V|SERINE/THREONINE-PROTEIN kinase US3 homolog|Equine herpesvirus 1 (strain V592)

Query: 2 AYPNLIFSD 10
AYP+ +F D
Sbjct: 276 AYPSTLFED 284


>sp|US03_EHV1B|SERINE/THREONINE-PROTEIN kinase US3 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 2 AYPNLIFSD 10
AYP+ +F D
Sbjct: 276 AYPSTLFED 284


>sp|KR1_EHV1K|SERINE/THREONINE-PROTEIN kinase|Equine herpesvirus 1 (strain Kentucky

Query: 2 AYPNLIFSD 10
AYP+ +F D
Sbjct: 276 AYPSTLFED 284


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3 YPNLIFSD 10
Y N+IFSD
Sbjct: 2252 YINVIFSD 2259


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3 YPNLIFSD 10
Y N+IFSD
Sbjct: 2272 YINVIFSD 2279


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3 YPNLIFSD 10
Y N+IFSD
Sbjct: 2302 YINVIFSD 2309




123|Sequence|611|620|LIFSDDLKSV

>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 LIFSDDLKSV 10
L ++DD+KSV
Sbjct: 1257 LSYADDIKSV 1266


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 LIFSDDLKSV 10
L ++DD+KSV
Sbjct: 1260 LSYADDVKSV 1269


>sp|KP6T_UMV6|KP6 killer toxin|Ustilago maydis P6 virus (UmV6)

Query: 2 IFSDDLKS 9
+FSDDL++
Sbjct: 79 LFSDDLRN 86


>sp|VGA_BPPHK|A protein|Enterobacteria phage phiK (Bacteriophage phi-K)

Query: 2 IFSDDLKSV 10
IFSD +KSV
Sbjct: 5 IFSDVVKSV 13


>sp|VGA_BPAL3|A protein|Escherichia phage alpha3 (Bacteriophage alpha-3)

Query: 2 IFSDDLKSV 10
IFSD +KSV
Sbjct: 5 IFSDVVKSV 13


>sp|NECK2_BPT4|NECK protein gp14|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 LIFSDDLKS 9
LIF +DLK+
Sbjct: 70 LIFGEDLKN 78




124|Sequence|616|625|DLKSVRLGNK

>sp|RDRP_BMV|RNA-DIRECTED RNA polymerase 2a|Brome mosaic virus (BMV)

Query: 1 DLKSVRLGNK 10
+LK+VRL N+
Sbjct: 450 ELKNVRLNNR 459


>sp|Y095_OSHVF|UNCHARACTERIZED protein ORF95|Ostreid herpesvirus 1 (isolate France)

Query: 1 DLKSVRLGN 9
DLK +RL N
Sbjct: 73 DLKIIRLAN 81




125|Sequence|621|630|RLGNKWERLP

>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 2 LGNKWERLP 10
+GN W RLP
Sbjct: 453 VGNTWHRLP 461


>sp|Y046_SIFVH|UNCHARACTERIZED protein 46|Sulfolobus islandicus filamentous virus (isolate

Query: 1 RLGNKWERLP 10
+LG+KW+ +P
Sbjct: 35 KLGSKWQGVP 44


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 1 RLGNKWE 7
+LGNKWE
Sbjct: 1093 QLGNKWE 1099


>sp|RDRP_BNYVS|REPLICASE necrotic yellow vein virus

Query: 1 RLGNKWERL 9
R+ +WERL
Sbjct: 61 RIAKRWERL 69


>sp|L_SYNV|RNA-DIRECTED RNA polymerase L|Sonchus yellow net virus (SYNV)

Query: 1 RLGNKWE 7
R+GN WE
Sbjct: 1193 RIGNSWE 1199


>sp|L_EBLV2|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 2 (strain

Query: 2 LGNKWERLP 10
+GN W +LP
Sbjct: 453 VGNTWHKLP 461


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 2 LGNKWERLP 10
+GN W +LP
Sbjct: 454 VGNTWHKLP 462


>sp|YL207_MIMIV|PUTATIVE helicase L207/L206|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 RLGNKWERL 9
R N+WERL
Sbjct: 51 RKNNEWERL 59


>sp|HMGH_IIV6|HIGH mobility group protein homolog|Invertebrate iridescent virus 6

Query: 2 LGNKWERLP 10
LG KW LP
Sbjct: 88 LGKKWSELP 96


>sp|PORTL_BPB03|PORTAL protein|Bacillus phage B103 (Bacteriophage B103)

Query: 5 KWERLP 10
+WERLP
Sbjct: 39 EWERLP 44


>sp|KBTB2_ECTVM|KELCH repeat and BTB domain-containing|Ectromelia virus (strain Moscow)

Query: 2 LGNKWERLP 10
+ N WE+LP
Sbjct: 439 VNNIWEKLP 447


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 RLGNKWER 8
RLG+KW++
Sbjct: 1558 RLGDKWDK 1565


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 RLGNKWER 8
RLG+KW++
Sbjct: 1558 RLGDKWDK 1565


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 RLGNKWER 8
RLG+KW++
Sbjct: 1558 RLGDKWDK 1565


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 1 RLGNKWERLP 10
R+G +WE +P
Sbjct: 2068 RVGPEWEPVP 2077


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 RLGNKWER 8
RLG+KW++
Sbjct: 1558 RLGDKWDK 1565


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 RLGNKWER 8
RLG+KW++
Sbjct: 1558 RLGDKWDK 1565


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 2 LGNKWERLP 10
G+KW LP
Sbjct: 429 FGDKWHELP 437


>sp|D14_BPT5|PROTEIN D14|Escherichia phage T5 (Enterobacteria phage

Query: 1 RLGNKWERLP 10
R G +WER+P
Sbjct: 23 RTGLEWERVP 32


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 LGNKWERLP 10
G+KW LP
Sbjct: 440 FGDKWHELP 448


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 LGNKWERLP 10
G+KW LP
Sbjct: 440 FGDKWHELP 448


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 LGNKWERLP 10
G+KW LP
Sbjct: 440 FGDKWHELP 448


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 LGNKWERLP 10
G+KW LP
Sbjct: 440 FGDKWHELP 448


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 LGNKWERLP 10
G+KW LP
Sbjct: 440 FGDKWHELP 448


>sp|ME53_NPVAC|EARLY 53 kDa protein|Autographa californica nuclear polyhedrosis virus

Query: 2 LGNKWERLP 10
GNK+E LP
Sbjct: 90 FGNKFEGLP 98


>sp|L_TIBVC|RNA-DIRECTED RNA polymerase L|Tibrogargan virus (strain CS132) (TIBV)

Query: 1 RLGNKWERLP 10
+ G+ W +LP
Sbjct: 453 QFGDNWHKLP 462


>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain

Query: 2 LGNKWERL 9
LGN+W+ L
Sbjct: 277 LGNRWKPL 284


>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain

Query: 2 LGNKWERL 9
LGN+W+ L
Sbjct: 277 LGNRWKPL 284


>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4 NKWERL 9
N+WER+
Sbjct: 888 NRWERI 893


>sp|MYB_AVIMB|TRANSFORMING protein Myb|Avian myeloblastosis virus (AMV)

Query: 1 RLGNKWERL 9
RLGN+W +
Sbjct: 90 RLGNRWAEI 98


>sp|PR519_MIMIV|ZINC metalloproteinase R519|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LGNKWE 7
+GNKW+
Sbjct: 473 IGNKWD 478


>sp|DPOL_ADES1|DNA polymerase|Snake adenovirus serotype 1 (SnAdV-1)

Query: 2 LGNKWERL 9
LG KWE L
Sbjct: 92 LGGKWEPL 99


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 1 RLGNKW 6
++GNKW
Sbjct: 414 KVGNKW 419


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 RLGNKW 6
++GNKW
Sbjct: 414 KVGNKW 419


>sp|LYSB_BPMD2|ENDOLYSIN B|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 RLGNKWERL 9
R+G+KW L
Sbjct: 233 RMGDKWPHL 241


>sp|L_MOKV|LARGE structural protein|Mokola virus (MOKV)

Query: 2 LGNKWERLP 10
LG+ W LP
Sbjct: 453 LGDSWHTLP 461


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 2 LGNKWERLP 10
+G+ W +LP
Sbjct: 453 VGDTWHKLP 461


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 2 LGNKWERLP 10
+G+ W +LP
Sbjct: 453 VGDTWHKLP 461


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 2 LGNKWERLP 10
+G+ W +LP
Sbjct: 453 VGDTWHKLP 461


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 2 LGNKWERLP 10
+G+ W +LP
Sbjct: 453 VGDTWHKLP 461


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 2 LGNKWERLP 10
+G+ W +LP
Sbjct: 453 VGDTWHKLP 461


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 2 LGNKWERLP 10
+G+ W +LP
Sbjct: 453 VGDTWHKLP 461


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 2 LGNKWERLP 10
+G+ W +LP
Sbjct: 454 VGDTWHKLP 462


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 2 LGNKWERLP 10
+G+ W +LP
Sbjct: 453 VGDTWHKLP 461


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 2 LGNKWERLP 10
+G+ W +LP
Sbjct: 453 VGDTWHKLP 461


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 2 LGNKWERLP 10
+G+ W +LP
Sbjct: 453 VGDTWHKLP 461


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 2 LGNKWERLP 10
G+ W +LP
Sbjct: 440 FGDNWHKLP 448


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 2 LGNKWERLP 10
G+ W +LP
Sbjct: 440 FGDNWHKLP 448


>sp|PORTL_BPP21|PORTAL protein B|Enterobacteria phage P21 (Bacteriophage 21)

Query: 5 KWERLP 10
+WER+P
Sbjct: 215 RWERIP 220


>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17

Query: 2 LGNKWERLP 10
+G W+R P
Sbjct: 165 IGEHWDRAP 173




126|Sequence|626|635|WERLPDGPQR

>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 2 ERLPDGPQ 9
ERLPDGP+
Sbjct: 1837 ERLPDGPR 1844


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 2 ERLPDGPQ 9
ERLPDGP+
Sbjct: 1836 ERLPDGPR 1843


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)

Query: 2 ERLPDGPQ 9
ERLPDGP+
Sbjct: 1836 ERLPDGPR 1843


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 2 ERLPDGPQ 9
ERLPDGP+
Sbjct: 1836 ERLPDGPR 1843


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 2 ERLPDGPQ 9
ERLPDGP+
Sbjct: 1834 ERLPDGPR 1841


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4 LPDGPQR 10
LPDGP+R
Sbjct: 1908 LPDGPER 1914


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4 LPDGPQR 10
LPDGP+R
Sbjct: 1908 LPDGPER 1914


>sp|YL829_MIMIV|UNCHARACTERIZED protein L829|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 LPDGPQR 10
LPDGP R
Sbjct: 343 LPDGPHR 349


>sp|VP75_ALHV1|PROBABLE membrane antigen 75|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 WERLPDGPQR 10
W+ LP G +R
Sbjct: 1287 WQHLPSGYER 1296


>sp|CEP2_SHV21|CYTOPLASMIC envelopment protein 2|Saimiriine herpesvirus 2 (strain 11)

Query: 2 ERLPDG 7
ERLPDG
Sbjct: 144 ERLPDG 149


>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I85A7|POLYMERASE acidic protein|Influenza A virus (strain A/Ruddy

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I79A1|POLYMERASE acidic protein|Influenza A virus (strain A/Pintail/Alberta/119/1979

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I80A6|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hokkaido/8/1980

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I49A1|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Germany/1949

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I34A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fowl

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 265 RLPDGP 270


>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 262 RLPDGP 267


>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I80A8|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I79A7|POLYMERASE acidic protein|Influenza A virus (strain A/Grey

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 262 RLPDGP 267


>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 246 RLPDGP 251


>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I83A4|POLYMERASE acidic protein|Influenza A virus (strain A/Turkey/Ireland/1378/1983

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I56A1|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Czechoslovakia/1956

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I56A2|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/England/1/1956

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 3 RLPDGP 8
RLPDGP
Sbjct: 269 RLPDGP 274


>sp|KBTB2_ECTVM|KELCH repeat and BTB domain-containing|Ectromelia virus (strain Moscow)

Query: 1 WERLPDGP 8
W+ LPD P
Sbjct: 379 WKMLPDMP 386


>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /

Query: 1 WERLPDGP 8
W+ LPD P
Sbjct: 379 WKMLPDMP 386


>sp|VG49_EHV2|UNCHARACTERIZED gene 49 protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 WERLPD 6
W RLPD
Sbjct: 195 WHRLPD 200


>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)

Query: 2 ERLPDGPQR 10
ER P GP R
Sbjct: 143 ERAPGGPYR 151


>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New

Query: 2 ERLPDGPQR 10
ER P GP R
Sbjct: 143 ERAPGGPYR 151


>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong

Query: 2 ERLPDGPQR 10
ER P GP R
Sbjct: 143 ERAPGGPYR 151


>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)

Query: 2 ERLPDGPQR 10
ER P GP R
Sbjct: 143 ERAPGGPYR 151


>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)

Query: 2 ERLPDGPQR 10
ER P GP R
Sbjct: 143 ERAPGGPYR 151


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 1 WERLPDG 7
WER PD
Sbjct: 932 WERFPDA 938


>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)

Query: 2 ERLPDGPQR 10
ER P GP R
Sbjct: 143 ERAPGGPYR 151


>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South

Query: 2 ERLPDGPQR 10
ER P GP R
Sbjct: 143 ERAPGGPYR 151


>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)

Query: 2 ERLPDGPQR 10
ER P GP R
Sbjct: 143 ERAPGGPYR 151


>sp|REP_MISV9|REPLICATION-ASSOCIATED protein|Miscanthus streak virus (isolate 91)

Query: 1 WERLPDGPQR 10
W + P+GP+R
Sbjct: 211 WNQQPNGPRR 220


>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong

Query: 2 ERLPDGPQR 10
ER P GP R
Sbjct: 143 ERAPGGPYR 151


>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|PORTL_BPKMV|PORTAL protein|Pseudomonas phage phiKMV

Query: 1 WERLPDG 7
WE+L DG
Sbjct: 9 WEKLRDG 15


>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|RPC_BPPHC|REPRESSOR protein C|Streptomyces phage phiC31 (Bacteriophage phi-C31)

Query: 1 WERLPDGPQR 10
W R DGP R
Sbjct: 501 WLRAFDGPDR 510


>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 WERLPD 6
W+RLP+
Sbjct: 1139 WQRLPE 1144


>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)

Query: 2 ERLPDGPQR 10
ER P GP R
Sbjct: 128 ERAPGGPYR 136


>sp|PA_I68A3|POLYMERASE acidic protein|Influenza A virus (strain A/Turkey/Ontario/6118/1968

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|PA_I66A1|POLYMERASE acidic protein|Influenza A virus (strain A/Turkey/Wisconsin/1/1966

Query: 3 RLPDGP 8
+LPDGP
Sbjct: 269 KLPDGP 274


>sp|PA_I83A5|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3 RLPDGP 8
RLP+GP
Sbjct: 269 RLPEGP 274


>sp|DGTPH_BPPMB|DATP/DGTP diphosphohydrolase|Salmonella phage PMBT28

Query: 1 WERLPDGPQR 10
W+RL DG +
Sbjct: 225 WQRLEDGTHQ 234


>sp|PA_I78AC|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3 RLPDGP 8
RLP+GP
Sbjct: 269 RLPEGP 274


>sp|PA_I77AF|POLYMERASE acidic protein|Influenza A virus (strain A/Gull/Maryland/704/1977

Query: 3 RLPDGP 8
RLP+GP
Sbjct: 269 RLPEGP 274


>sp|PA_I80AD|POLYMERASE acidic protein|Influenza A virus (strain A/Gull/Minnesota/945/1980

Query: 3 RLPDGP 8
RLP+GP
Sbjct: 269 RLPEGP 274


>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3 RLPDGP 8
RLP+GP
Sbjct: 269 RLPEGP 274


>sp|034R_IIV6|UNCHARACTERIZED protein 034R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 WERLPDGP 8
WE+ P GP
Sbjct: 69 WEKYPHGP 76




127|Sequence|631|640|DGPQRFDSCI

>sp|NS1A_TASV1|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 1 (TAstV-1)

Query: 2 GPQRFDSCI 10
GP RFDS +
Sbjct: 519 GPNRFDSIV 527


>sp|NS1AB_TASV1|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 1 (TAstV-1)

Query: 2 GPQRFDSCI 10
GP RFDS +
Sbjct: 519 GPNRFDSIV 527


>sp|VP1_AQRVA|OUTER capsid protein VP1|Aquareovirus A (isolate Chum

Query: 4 QRFDSCI 10
+R+DSCI
Sbjct: 25 RRYDSCI 31


>sp|D13_FOWPV|SCAFFOLD protein|Fowlpox virus (FPV)

Query: 1 DGPQRFDSCI 10
DG + FD C+
Sbjct: 114 DGEELFDKCV 123


>sp|D13_FOWPN|SCAFFOLD protein|Fowlpox virus (strain NVSL) (FPV)

Query: 1 DGPQRFDSCI 10
DG + FD C+
Sbjct: 114 DGEELFDKCV 123


>sp|UL15B_PSHV1|LARGE terminase protein homolog UL15b|Psittacid herpesvirus 1 (isolate

Query: 1 DGPQRFDSCI 10
D QRF +CI
Sbjct: 83 DVSQRFQACI 92


>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)

Query: 1 DGPQRFDSC 9
DG R DSC
Sbjct: 497 DGSIRVDSC 505


>sp|149L_IIV6|UNCHARACTERIZED protein 149L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 DGPQRFDS 8
DGP RF S
Sbjct: 207 DGPNRFFS 214


>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 DGPQRFDSC 9
DG R DSC
Sbjct: 497 DGSFRVDSC 505


>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1

Query: 1 DGPQRFD 7
DGP FD
Sbjct: 88 DGPSEFD 94


>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate

Query: 1 DGPQRFD 7
DGP FD
Sbjct: 88 DGPSEFD 94


>sp|YR355_MIMIV|PUTATIVE thiol protease R355|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GPQRFD 7
GPQR+D
Sbjct: 5 GPQRYD 10


>sp|UL13_PSHV1|SERINE/THREONINE-PROTEIN kinase UL13|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 GPQRFDSC 9
GP+R D C
Sbjct: 32 GPERCDVC 39




128|Sequence|636|645|FDSCIIVLGS

>sp|Y022_OSHVF|UNCHARACTERIZED protein ORF22|Ostreid herpesvirus 1 (isolate France)

Query: 1 FDSCIIVL 8
FD CII +
Sbjct: 46 FDGCIIAM 53




129|Sequence|641|650|IVLGSPSFLS

***** No hits found ******


130|Sequence|646|655|PSFLSGRRYW

>sp|CVC1_ALHV1|CAPSID vertex component 1|Alcelaphine herpesvirus 1 (strain C500)

Query: 4 LSGRRYW 10
LSG+R+W
Sbjct: 253 LSGKRFW 259


>sp|RDRP_PMV|RNA replication protein|Papaya mosaic potexvirus (PMV)

Query: 1 PSFLSGRRYW 10
P L+GR+ W
Sbjct: 550 PDHLTGRKAW 559


>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 1 PSFLSGRRYW 10
P +GR YW
Sbjct: 1546 PQSYTGRAYW 1555


>sp|VGH_BPS13|MINOR spike protein|Enterobacteria phage S13 (Bacteriophage S13)

Query: 1 PSFLSG 6
PSFLSG
Sbjct: 69 PSFLSG 74


>sp|VG53_BPMD2|GENE 53 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 PSFLSGRRY 9
P FL GR Y
Sbjct: 223 PEFLGGRCY 231


>sp|VSR_GVAIS|RNA silencing suppressor|Grapevine virus A (isolate Is

Query: 1 PSFLSGR 7
PSFL+GR
Sbjct: 4 PSFLTGR 10


>sp|NEC2_HHV6U|NUCLEAR egress protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 SFLSGRRYW 10
S LSG ++W
Sbjct: 229 SLLSGVKFW 237


>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)

Query: 1 PSFLSGRRYW 10
PSF G+ +W
Sbjct: 182 PSFSLGKTHW 191


>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain

Query: 1 PSFLSGRRYW 10
PSF G+ +W
Sbjct: 182 PSFSLGKTHW 191


>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain

Query: 1 PSFLSGRRYW 10
PSF G+ +W
Sbjct: 182 PSFSLGKTHW 191


>sp|HN_MUMPV|HEMAGGLUTININ-NEURAMINIDASE orthorubulavirus (MuV)

Query: 1 PSFLSGRRYW 10
PSF G+ +W
Sbjct: 182 PSFSLGKTHW 191


>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)

Query: 1 PSFLSGRRYW 10
PSF G+ +W
Sbjct: 182 PSFSLGKTHW 191


>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain

Query: 1 PSFLSGRRYW 10
PSF G+ +W
Sbjct: 182 PSFSLGKTHW 191


>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain

Query: 1 PSFLSGRRYW 10
PSF G+ +W
Sbjct: 177 PSFSLGQTHW 186


>sp|RDRP_TCV|RNA-DIRECTED RNA polymerase|Turnip crinkle virus (TCV)

Query: 1 PSFLSGRR 8
PSF GRR
Sbjct: 363 PSFYKGRR 370


>sp|P2_BPPRD|ADSORPTION protein P2|Enterobacteria phage PRD1 (Bacteriophage PRD1)

Query: 1 PSFLSGRRYW 10
PS G YW
Sbjct: 36 PSIYQGGNYW 45




131|Sequence|651|660|GRRYWEVEVG

>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 GRRYWEVEVG 10
GR YW+ G
Sbjct: 1764 GRAYWQTSTG 1773


Query: 4 YWEVEV 9
+WEVEV
Sbjct: 498 HWEVEV 503


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 GRRYWEVEVG 10
GR YW+ G
Sbjct: 1781 GRAYWQTSTG 1790


Query: 4 YWEVEV 9
+WEVEV
Sbjct: 498 HWEVEV 503


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 RYWEVE 8
+YWEVE
Sbjct: 5147 KYWEVE 5152


>sp|VT4_SHEVN|T4 protein|Sheeppox virus (strain InS-1) (SPPV)

Query: 5 WEVEVG 10
WE+EVG
Sbjct: 36 WEIEVG 41


>sp|VT4_SHEVK|T4 protein|Sheeppox virus (strain KS-1) (SPPV)

Query: 5 WEVEVG 10
WE+EVG
Sbjct: 36 WEIEVG 41


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 GRRYWEVEVG 10
GR+ +EVE G
Sbjct: 740 GRKIYEVERG 749


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 GRRYWEVEVG 10
GR+ +EVE G
Sbjct: 740 GRKIYEVERG 749


>sp|NS3B_IBVP3|NON-STRUCTURAL protein 3b|Avian infectious bronchitis virus (strain

Query: 1 GRRYWEVE 8
G YWE+E
Sbjct: 44 GGNYWELE 51


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 RYWEVE 8
RYWE E
Sbjct: 5306 RYWEPE 5311


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 RYWEVE 8
RYWE E
Sbjct: 5283 RYWEPE 5288


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 3 RYWEVE 8
RYWE E
Sbjct: 5281 RYWEPE 5286


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 3 RYWEVE 8
RYWE E
Sbjct: 5277 RYWEPE 5282


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 3 RYWEVE 8
RYWE E
Sbjct: 5289 RYWEPE 5294


>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 GRRYWEV 7
GRR WEV
Sbjct: 782 GRRGWEV 788


>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 GRRYWEV 7
GRR WEV
Sbjct: 785 GRRGWEV 791


>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 GRRYWEV 7
GRR WEV
Sbjct: 786 GRRGWEV 792


>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 GRRYWEV 7
GRR WEV
Sbjct: 782 GRRGWEV 788


>sp|DPOL_PBCV1|DNA polymerase|Paramecium bursaria Chlorella virus 1

Query: 1 GRRYWEVEVG 10
G Y+E+E G
Sbjct: 515 GVEYYEIETG 524


>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 GRRYWEV 7
GRR WEV
Sbjct: 798 GRRGWEV 804


>sp|RPOTF_PRRSL|REPLICASE polyprotein 1TF|Porcine reproductive and respiratory syndrome

Query: 4 YWEVEV 9
+WEVEV
Sbjct: 498 HWEVEV 503


>sp|NS3B_IBVU5|NON-STRUCTURAL protein 3b|Avian infectious bronchitis virus (strain

Query: 1 GRRYWEVE 8
G YWE+E
Sbjct: 44 GGNYWELE 51


>sp|MIL_AVIMH|SERINE/THREONINE-PROTEIN kinase-transforming protein mil|Avian retrovirus MH2

Query: 4 YWEVE 8
YWE+E
Sbjct: 74 YWEIE 78


>sp|1ATF_PRRSS|TRUNCATED polyprotein 1aTF|Porcine reproductive and respiratory syndrome

Query: 4 YWEVEV 9
+WEVEV
Sbjct: 498 HWEVEV 503


>sp|DPOL_PBCVN|DNA polymerase|Paramecium bursaria Chlorella virus NY2A

Query: 1 GRRYWEVEVG 10
G Y+E+E G
Sbjct: 515 GIEYYEIETG 524


>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 GRRYWEV 7
GRR WE+
Sbjct: 778 GRRGWEI 784


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 RRYWEVEVG 10
+ +WEV++G
Sbjct: 682 QEFWEVQLG 690


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 RRYWEVEVG 10
+ +WEV++G
Sbjct: 671 QEFWEVQLG 679


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4 YWEVEVG 10
+WEV++G
Sbjct: 668 FWEVQLG 674


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4 YWEVEVG 10
+WEV++G
Sbjct: 678 FWEVQLG 684




132|Sequence|656|665|EVEVGDKTAW

>sp|CAPSD_TASV2|CAPSID polyprotein VP90|Turkey astrovirus 2 (TAstV-2)

Query: 1 EVEVGDKTAW 10
EV +G KT W
Sbjct: 182 EVPIGSKTVW 191


>sp|OBP_PSHV1|REPLICATION origin-binding protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 EVGDKTAW 10
E+G TAW
Sbjct: 435 EIGSATAW 442


>sp|GH_SUHVK|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain Kaplan)

Query: 2 VEVGDKTAW 10
V VGD +AW
Sbjct: 57 VLVGDGSAW 65


>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain

Query: 1 EVEVGDKTAW 10
++E G+K+ W
Sbjct: 138 KIESGEKSTW 147


>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 EVGDKTA 9
EVG+KTA
Sbjct: 51 EVGEKTA 57


>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 EVGDKTA 9
EVG+KTA
Sbjct: 51 EVGEKTA 57


>sp|POL_COYMV|POLYPROTEIN P3|Commelina yellow mottle virus (CoYMV)

Query: 5 GDKTAW 10
GDK AW
Sbjct: 662 GDKIAW 667




133|Sequence|661|670|DKTAWILGAC

>sp|POL_MLVFP|GAG-POL polyprotein|Friend murine leukemia virus (isolate

Query: 1 DKTAWILGA 9
DK+AW+ GA
Sbjct: 583 DKSAWVQGA 591


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 1 DKTAWILGA 9
DK+AW+ GA
Sbjct: 581 DKSAWVQGA 589


>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 1 DKTAWILGA 9
DK+AW+ GA
Sbjct: 581 DKSAWVQGA 589


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 1 DKTAWILGA 9
DK+AW+ GA
Sbjct: 581 DKSAWVQGA 589


>sp|POL_MLVMS|GAG-POL polyprotein|Moloney murine leukemia virus (isolate

Query: 1 DKTAWILGA 9
DK+AW+ GA
Sbjct: 583 DKSAWVQGA 591


>sp|POL_MLVFF|GAG-POL polyprotein|Friend murine leukemia virus (isolate

Query: 1 DKTAWILGA 9
DK+AW+ GA
Sbjct: 583 DKSAWVQGA 591


>sp|POL_MLVF5|GAG-POL polyprotein|Friend murine leukemia virus (isolate

Query: 1 DKTAWILGA 9
DK+AW+ GA
Sbjct: 584 DKSAWVQGA 592


>sp|POL_MLVCB|GAG-POL polyprotein|Cas-Br-E murine leukemia virus

Query: 1 DKTAWILGA 9
DK+AW+ GA
Sbjct: 581 DKSAWVQGA 589


>sp|VG66_BPML5|GENE 66 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 DKTAWILG 8
D T WILG
Sbjct: 45 DDTVWILG 52


>sp|YL732_MIMIV|UNCHARACTERIZED protein L732|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 KTAWILGAC 10
+T WI G C
Sbjct: 74 ETKWITGKC 82


>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 DKTAWILGA 9
D+T W+LG+
Sbjct: 672 DETFWVLGS 680


>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 DKTAWILGA 9
D+T W+LG+
Sbjct: 673 DETFWVLGS 681


>sp|DEPOL_BPKN1|DEPOLYMERASE, capsule KN1-specific|Klebsiella phage KN1-1 (Bacteriophage KN1-1)

Query: 1 DKTAWILGAC 10
D W+LG C
Sbjct: 450 DTDVWLLGWC 459


>sp|GE_CHV1E|ENVELOPE glycoprotein E|Cercopithecine herpesvirus 1 (strain E2490)

Query: 4 AWILGAC 10
AW +GAC
Sbjct: 14 AWAIGAC 20


>sp|VP5_IPNVJ|PROTEIN VP5|Infectious pancreatic necrosis virus (strain

Query: 2 KTAWILGAC 10
+++WI G C
Sbjct: 75 RSSWIQGRC 83


>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain

Query: 2 KTAWILGAC 10
+TA ILG C
Sbjct: 22 RTATILGIC 30


>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)

Query: 2 KTAWILGAC 10
+TA ILG C
Sbjct: 22 RTATILGIC 30


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 3 TAWILGA 9
TAW+LG+
Sbjct: 259 TAWMLGS 265




134|Sequence|666|675|ILGACKTSIS

>sp|NCAP_MOBVC|NUCLEOPROTEIN mammarenavirus (isolate Rat/Central African

Query: 4 ACKTSIS 10
AC+TSIS
Sbjct: 320 ACRTSIS 326


>sp|CAPSH_ASFWA|MAJOR capsid protein|African swine fever virus (isolate

Query: 1 ILGACKTS 8
ILGAC +S
Sbjct: 109 ILGACHSS 116


>sp|CAPSH_ASFK5|MAJOR capsid protein|African swine fever virus (isolate

Query: 1 ILGACKTS 8
ILGAC +S
Sbjct: 109 ILGACHSS 116


>sp|CAPSH_ASFB7|HEXON protein p72|African swine fever virus (strain

Query: 1 ILGACKTS 8
ILGAC +S
Sbjct: 109 ILGACHSS 116




135|Sequence|671|680|KTSISRKGNM

>sp|YL670_MIMIV|PUTATIVE serine/threonine-protein kinase L670|Acanthamoeba polyphaga

Query: 1 KTSISRK 7
KTSISRK
Sbjct: 53 KTSISRK 59




136|Sequence|676|685|RKGNMTLSPE

>sp|PB2_I34A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fowl

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVILSPE 516


>sp|PB2_I86A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Kentucky/2/1986

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNILLSPE 516


>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNILLSPE 516


>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 171 QRGNVLLSPE 180


>sp|PB2_I01A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 171 QRGNVLLSPE 180


>sp|PB2_I66A0|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I85A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Ruddy

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I80A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hokkaido/8/1980

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I77AF|POLYMERASE basic protein 2|Influenza A virus (strain A/Gull/Maryland/704/1977

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I56A1|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 506 QRGNVLLSPE 515


>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I84A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Gull/Astrakhan/227/1984

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I83A5|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I82A3|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I79A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Grey

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I77AG|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I56A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/England/1/1956

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 501 QRGNVLLSPE 510


>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 499 QRGNVLLSPE 508


>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 500 QRGNVLLSPE 509


>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I83A4|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I80AD|POLYMERASE basic protein 2|Influenza A virus (strain A/Gull/Minnesota/945/1980

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I80A8|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I49A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Germany/1949

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QRGNVLLSPE 516


>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QQGNVLLSPE 516


>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QQGNVLLSPE 516


>sp|PB2_I68A3|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QQGNVLLSPE 516


>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QQGNVLLSPE 516


>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QQGNVLLSPE 516


>sp|PB2_I66A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Turkey/Wisconsin/1/1966

Query: 2 KGNMTLSPE 10
+GN+ LSPE
Sbjct: 508 RGNVLLSPE 516


>sp|RIR2_OSHVF|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Ostreid herpesvirus 1 (isolate France)

Query: 1 RKGNMTLSP 9
+KGN+ LSP
Sbjct: 336 QKGNVLLSP 344


>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 1 RKGNMTLSPE 10
++GN+ LSPE
Sbjct: 507 QQGNVLLSPE 516


>sp|VEF_GVTN|VIRAL-ENHANCING factor|Trichoplusia ni granulosis virus (TnGV)

Query: 1 RKGNMTLSPE 10
R+GN ++PE
Sbjct: 804 RRGNEPMTPE 813


>sp|POLG_BSTV1|GENOME polyprotein|Brome streak virus (strain 11-Cal)

Query: 2 KGNMTLSP 9
+GNM LSP
Sbjct: 1596 QGNMRLSP 1603


>sp|VEF_GVPU|VIRAL-ENHANCING factor|Pseudalatia unipuncta granulosis virus (PuGV)

Query: 1 RKGNMTLSPE 10
R+GN ++PE
Sbjct: 804 RRGNEPMTPE 813


>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 GNMTLSPE 10
GN LSPE
Sbjct: 303 GNFVLSPE 310


>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 GNMTLSPE 10
GN LSPE
Sbjct: 303 GNFVLSPE 310


>sp|VP10_FDVS|PUTATIVE outer capsid protein p10|Fiji disease virus (isolate Sugarcane)

Query: 2 KGNMTLSP 9
+GN+TL P
Sbjct: 150 EGNLTLKP 157


>sp|NCAP_LATVB|NUCLEOPROTEIN mammarenavirus (isolate Rat/Bolivia/MARU 1924/1965)

Query: 3 GNMTLSP 9
GNM LSP
Sbjct: 348 GNMRLSP 354




137|Sequence|681|690|TLSPENGYWV

>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 1 TLSPENGYWV 10
T +P NGYW+
Sbjct: 73 TFTPPNGYWI 82


>sp|VBET_BPP4|PROTEIN beta|Enterobacteria phage P4 (Bacteriophage P4)

Query: 2 LSPENGY--WV 10
LSPENG+ W+
Sbjct: 85 LSPENGFKNWI 95


>sp|VP4_ROT18|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 2 LSPENGYWV 10
+PE GYW+
Sbjct: 74 FNPEIGYWI 82


>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 1 TLSPENGYWV 10
T +P N YW+
Sbjct: 73 TFTPPNDYWI 82


>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 TLSPENGYWV 10
T +P N YW+
Sbjct: 73 TFTPPNDYWI 82


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 5 ENGYWV 10
E+GYWV
Sbjct: 2107 ESGYWV 2112


>sp|VS48_TBRVL|SATELLITE RNA 48 kDa protein|Tomato black ring virus (strain

Query: 5 ENGYWV 10
+NGYWV
Sbjct: 96 DNGYWV 101


>sp|VS48_BRSV|SATELLITE RNA 48 kDa protein|Beet ringspot virus (BRSV) (Tomato

Query: 5 ENGYWV 10
+NGYWV
Sbjct: 96 DNGYWV 101


>sp|FIB31_BPHC1|PROBABLE tail fiber protein|Haemophilus phage HP1 (strain HP1c1)

Query: 4 PENGYW 9
PENG W
Sbjct: 484 PENGEW 489


>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)

Query: 2 LSPENGYW 9
+SP++ YW
Sbjct: 428 ISPDDKYW 435


>sp|NP_ADEB2|PRE-HISTONE-LIKE nucleoprotein|Bovine adenovirus 2 (BAdV-2) (Mastadenovirus

Query: 2 LSPENGYWV 10
L P N YWV
Sbjct: 153 LGPRNIYWV 161


>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 1 TLSPENGY 8
T+ PE GY
Sbjct: 499 TIDPEQGY 506


>sp|MVP_TVMV|P3N-PIPO polyprotein|Tobacco vein mottling virus (TVMV)

Query: 1 TLSPENGY 8
T+ PE GY
Sbjct: 499 TIDPEQGY 506


>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)

Query: 2 LSPENGYW 9
+SP++ YW
Sbjct: 428 ISPDDKYW 435


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 TLSPENGY 8
T SPENG+
Sbjct: 247 TESPENGF 254


>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain

Query: 2 LSPENGYW 9
L EN YW
Sbjct: 340 LKTENSYW 347


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 TLSPENGY 8
T SPENG+
Sbjct: 247 TESPENGF 254


>sp|RPOTF_PRRSL|REPLICASE polyprotein 1TF|Porcine reproductive and respiratory syndrome

Query: 1 TLSPENGY 8
T SPENG+
Sbjct: 247 TESPENGF 254


>sp|MCAPS_BYDVP|READTHROUGH protein P3-RTD|Barley yellow dwarf virus (isolate

Query: 5 ENGYWV 10
E+GYW+
Sbjct: 327 EDGYWI 332


>sp|Y024_OSHVF|UNCHARACTERIZED protein ORF24|Ostreid herpesvirus 1 (isolate France)

Query: 2 LSPENGYWV 10
L P YW+
Sbjct: 7 LQPNKSYWI 15


>sp|SPIKE_CVPIA|SPIKE glycoprotein|Porcine hemagglutinating encephalomyelitis virus (strain

Query: 2 LSPENGYWV 10
+SP++GY++
Sbjct: 1169 ISPKSGYFI 1177


>sp|SPIKE_CVP67|SPIKE glycoprotein|Porcine hemagglutinating encephalomyelitis virus (strain

Query: 2 LSPENGYWV 10
+SP++GY++
Sbjct: 1169 ISPKSGYFI 1177


>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 TLSPENGYWV 10
T P N YW+
Sbjct: 73 TFKPPNDYWL 82


>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 1 TLSPENGYWV 10
T P N YW+
Sbjct: 73 TFKPPNDYWL 82


>sp|1ATF_PRRSS|TRUNCATED polyprotein 1aTF|Porcine reproductive and respiratory syndrome

Query: 1 TLSPENGY 8
T SPENG+
Sbjct: 247 TESPENGF 254


>sp|VF69R_ASFK5|UNCHARACTERIZED membrane protein X69R|African swine fever virus (isolate

Query: 2 LSPENGYW 9
L P+N YW
Sbjct: 17 LVPDNKYW 24


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 TLSPENG 7
TLSPE G
Sbjct: 1662 TLSPEEG 1668


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 2 LSPENGYWV 10
++P NGY++
Sbjct: 1165 IAPVNGYFI 1173


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 1 TLSPENG 7
TLSPE G
Sbjct: 1662 TLSPEEG 1668


>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 TLSPENGYW 9
T P N YW
Sbjct: 73 TFKPPNDYW 81


>sp|VP4_ROTPG|OUTER capsid protein VP4|Rotavirus A (strain RVA/Pig/United

Query: 1 TLSPENGYWV 10
+ P N YW+
Sbjct: 73 SFKPPNDYWI 82




138|Sequence|686|695|NGYWVVIMMK

>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 1 NGYWVVI 7
NGYW++I
Sbjct: 78 NGYWILI 84


>sp|L_MPV15|RNA-DIRECTED RNA polymerase L|Murine pneumonia virus (strain 15)

Query: 2 GYWVVIMM 9
G+W++I+M
Sbjct: 1437 GHWIIILM 1444


>sp|US16_HCMVM|PROTEIN US16|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 NGYWVVIMM 9
NG WVV+ +
Sbjct: 189 NGVWVVVFL 197


>sp|VS48_TBRVL|SATELLITE RNA 48 kDa protein|Tomato black ring virus (strain

Query: 1 NGYWV 5
NGYWV
Sbjct: 97 NGYWV 101


>sp|VS48_BRSV|SATELLITE RNA 48 kDa protein|Beet ringspot virus (BRSV) (Tomato

Query: 1 NGYWV 5
NGYWV
Sbjct: 97 NGYWV 101


>sp|POLG_NIGSP|GENOME polyprotein|Nigerian sorghum potyvirus (Dawa mosaic

Query: 1 NGYWVVI 7
NGYW ++
Sbjct: 156 NGYWTMV 162


>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Query: 1 NGYWVVIMM 9
NG W+VI++
Sbjct: 1103 NGNWIVIVV 1111


>sp|POLG_GSMV|GENOME polyprotein|Gloriosa stripe mosaic virus (GSMV)

Query: 1 NGYWVVI 7
NG+WV++
Sbjct: 6 NGFWVML 12


>sp|CAPSD_TOBSV|CAPSID protein|Tobacco streak virus (strain WC)

Query: 2 GYWVVI 7
GYW+ I
Sbjct: 215 GYWIAI 220


>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 1 NGYWVVIM 8
NG W V+M
Sbjct: 2938 NGVWPVLM 2945


>sp|VINT_BPP4|INTEGRASE phage P4 (Bacteriophage P4)

Query: 1 NGYWVVIMM 9
N YW++ M
Sbjct: 428 NSYWLIFKM 436


>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 NGYWVVI 7
N YW++I
Sbjct: 78 NDYWILI 84


>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 1 NGYWVVI 7
N YW++I
Sbjct: 78 NDYWILI 84




139|Sequence|691|700|VIMMKENEYQ

>sp|V248_FOWPN|UNCHARACTERIZED protein FPV248|Fowlpox virus (strain NVSL) (FPV)

Query: 1 VIMMKENEY 9
+IMMKENEY
Sbjct: 22 IIMMKENEY 30




140|Sequence|696|705|ENEYQASSVP

>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 NEYQASSVP 10
NEY SSVP
Sbjct: 571 NEYVVSSVP 579


>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 NEYQASSVP 10
NEY SSVP
Sbjct: 571 NEYVVSSVP 579


>sp|C124_SSV1|UNCHARACTERIZED protein C-124|Sulfolobus spindle-shape virus 1 (SSV1)

Query: 4 YQASSVP 10
YQA SVP
Sbjct: 70 YQAQSVP 76




141|Sequence|701|710|ASSVPPTRLL

>sp|ENV_BLVB2|ENVELOPE glycoprotein|Bovine leukemia virus (isolate Belgium

Query: 1 ASSVPPTRL 9
ASS PPTR+
Sbjct: 291 ASSAPPTRV 299


>sp|ENV_BLVAU|ENVELOPE glycoprotein|Bovine leukemia virus (isolate Australian)

Query: 1 ASSVPPTRL 9
ASS PPTR+
Sbjct: 291 ASSAPPTRV 299


>sp|ENV_BLVAF|ENVELOPE glycoprotein|Bovine leukemia virus (isolate American

Query: 1 ASSVPPTRL 9
ASS PPTR+
Sbjct: 291 ASSAPPTRV 299


>sp|ENV_BLVJ|ENVELOPE glycoprotein|Bovine leukemia virus (isolate Japanese

Query: 1 ASSVPPTRL 9
ASS PPTR+
Sbjct: 291 ASSAPPTRV 299


>sp|ENV_BLVAV|ENVELOPE glycoprotein|Bovine leukemia virus (isolate American

Query: 1 ASSVPPTRL 9
ASS PPTR+
Sbjct: 291 ASSAPPTRV 299


>sp|ENV_BLVB5|ENVELOPE glycoprotein|Bovine leukemia virus (isolate Belgium

Query: 1 ASSVPPTRL 9
ASS PPTR+
Sbjct: 291 ASSAPPTRV 299


>sp|MT_POVMC|MIDDLE T antigen|Murine polyomavirus (strain Crawford small-plaque)

Query: 1 ASSVPPTRLL 10
+ S PPTR+L
Sbjct: 255 SHSFPPTRVL 264


>sp|MT_POVMA|MIDDLE T antigen|Murine polyomavirus (strain A2) (MPyV)

Query: 1 ASSVPPTRLL 10
+ S PPTR+L
Sbjct: 255 SHSYPPTRVL 264


>sp|MT_POVM3|MIDDLE T antigen|Murine polyomavirus (strain A3) (MPyV)

Query: 1 ASSVPPTRLL 10
+ S PPTR+L
Sbjct: 255 SHSYPPTRVL 264


>sp|MT_POVM1|MIDDLE T antigen|Mus musculus polyomavirus 1 (MPyV)

Query: 1 ASSVPPTRLL 10
+ S PPTR+L
Sbjct: 255 SHSYPPTRVL 264


>sp|MT_POVBG|MIDDLE T antigen|Murine polyomavirus (strain BG) (MPyV)

Query: 1 ASSVPPTRLL 10
+ S PPTR+L
Sbjct: 255 SHSYPPTRVL 264




142|Sequence|706|715|PTRLLIKEPP

>sp|RDRP_SCVLA|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-A

Query: 1 PTRLLIKEP 9
PTR +++EP
Sbjct: 692 PTRYILQEP 700


>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42

Query: 1 PTRLLIKEPP 10
PT L+ EPP
Sbjct: 295 PTNQLLIEPP 304


>sp|POL1_BBWVS|RNA1 polyprotein|Broad bean wilt virus 1

Query: 1 PTRLLIKEP 9
P R +IKEP
Sbjct: 1350 PVRKVIKEP 1358


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 4 LLIKEPP 10
LL+K+PP
Sbjct: 2033 LLVKKPP 2039


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1 PTRLLIKE 8
PTR+++KE
Sbjct: 1718 PTRVVLKE 1725


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1 PTRLLIKE 8
PTR+++KE
Sbjct: 1718 PTRVVLKE 1725


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1 PTRLLIKE 8
PTR+++KE
Sbjct: 1718 PTRVVLKE 1725


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 1 PTRLLIKE 8
PTR+++KE
Sbjct: 1718 PTRVVLKE 1725


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 1 PTRLLIKE 8
PTR+++KE
Sbjct: 1718 PTRVVLKE 1725


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1 PTRLLIKE 8
PTR+++KE
Sbjct: 1718 PTRVVLKE 1725


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 4 LLIKEPP 10
LL+K+PP
Sbjct: 2033 LLVKKPP 2039


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1 PTRLLIKE 8
PTR+++KE
Sbjct: 1720 PTRVVLKE 1727


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1 PTRLLIKE 8
PTR+++KE
Sbjct: 1720 PTRVVLKE 1727


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1 PTRLLIKE 8
PTR+++KE
Sbjct: 1718 PTRVVLKE 1725




143|Sequence|711|720|IKEPPKRVGI

>sp|LT_BFPYV|LARGE T antigen|Budgerigar fledgling disease virus (BFPyV)

Query: 1 IKEPPKR 7
+K PPKR
Sbjct: 373 VKNPPKR 379


>sp|VT3C_SHEVK|T3C protein|Sheeppox virus (strain KS-1) (SPPV)

Query: 1 IKEPPKR 7
IKEPP++
Sbjct: 114 IKEPPRK 120


>sp|POLG_FCVC6|GENOME polyprotein|Feline calicivirus (strain CFI/68 FIV)

Query: 2 KEPPKRV 8
KEPPK +
Sbjct: 1673 KEPPKTI 1679




144|Sequence|716|725|KRVGIFVDYR

>sp|DPOL_ASFL6|DNA polymerase beta|African swine fever virus (isolate

Query: 1 KRVGIFVD 8
K++GIF D
Sbjct: 1014 KKIGIFAD 1021


>sp|DPOL_ASFP4|DNA polymerase beta|African swine fever virus (isolate

Query: 1 KRVGIFVD 8
K++GIF D
Sbjct: 1013 KKIGIFAD 1020


>sp|DPOL_ASFWA|DNA polymerase beta|African swine fever virus (isolate

Query: 1 KRVGIFVD 8
K++GIF D
Sbjct: 1013 KKIGIFAD 1020


>sp|DPOL_ASFM2|DNA polymerase beta|African swine fever virus (isolate

Query: 1 KRVGIFVD 8
K++GIF D
Sbjct: 1013 KKIGIFAD 1020


>sp|DPOL_ASFB7|DNA polymerase beta|African swine fever virus (strain

Query: 1 KRVGIFVD 8
K++GIF D
Sbjct: 1017 KKIGIFAD 1024


>sp|DPOL_ASFK5|DNA polymerase beta|African swine fever virus (isolate

Query: 1 KRVGIFVD 8
K++GIF D
Sbjct: 1014 KKIGIFAD 1021


>sp|YR739_MIMIV|PUTATIVE BTB/POZ domain and WD-repeat|Acanthamoeba polyphaga mimivirus

Query: 1 KRVGIFVDY 9
K +G+F DY
Sbjct: 460 KNIGVFSDY 468


>sp|36011_ASFWA|PROTEIN MGF 360-11L|African swine fever virus (isolate

Query: 3 VGIFVDY 9
+GIF+DY
Sbjct: 344 MGIFLDY 350


>sp|36011_ASFP4|PROTEIN MGF 360-11L|African swine fever virus (isolate

Query: 3 VGIFVDY 9
+GIF+DY
Sbjct: 344 MGIFLDY 350




145|Sequence|721|730|FVDYRVGSIS

>sp|KILA_BPP1|PROTEIN kilA|Escherichia phage P1 (Bacteriophage P1)

Query: 1 FVDYRVGSI 9
F+DYR G +
Sbjct: 118 FIDYRTGRL 126


>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum

Query: 1 FVDYRVGSI 9
F DYR+G +
Sbjct: 844 FKDYRIGGV 852




146|Sequence|726|735|VGSISFYNVT

>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus

Query: 1 VGSISFYNVT 10
V S++FYNVT
Sbjct: 13 VSSVTFYNVT 22


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 3 SISFYN 8
SISFYN
Sbjct: 1860 SISFYN 1865


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 3 SISFYN 8
SISFYN
Sbjct: 1860 SISFYN 1865


>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)

Query: 2 GSISFYN 8
G ISFYN
Sbjct: 552 GLISFYN 558


>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)

Query: 1 VGSISFYN 8
+GS+ FYN
Sbjct: 14 IGSLGFYN 21




147|Sequence|731|740|FYNVTARSHI

>sp|RDRP_BOTVF|RNA replication protein|Botrytis virus F (isolate Botrytis

Query: 2 YNVTARSHI 10
Y +TAR H+
Sbjct: 121 YAITARDHV 129


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 1 FYNVTARSH 9
+Y+VT SH
Sbjct: 456 YYHVTGSSH 464


>sp|GP_SBVBH|ENVELOPMENT polyprotein|Bovine Schmallenberg virus (isolate

Query: 1 FYNVTARSH 9
FY V+A++H
Sbjct: 834 FYYVSAKAH 842


>sp|D3_RFVKA|CORE protein D3 homolog|Rabbit fibroma virus (strain Kasza)

Query: 1 FYNVTARSHI 10
F NVT RS++
Sbjct: 151 FKNVTLRSYV 160




148|Sequence|736|745|ARSHIYTFAS

>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 1 ARSHIYTFA 9
AR H+YT A
Sbjct: 1791 ARGHLYTLA 1799


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1 ARSHIYTFA 9
AR H+YT A
Sbjct: 1791 ARGHLYTLA 1799


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 1 ARSHIYTFA 9
AR H+YT A
Sbjct: 1791 ARGHLYTLA 1799


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1 ARSHIYTFA 9
AR H+YT A
Sbjct: 1791 ARGHLYTLA 1799


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1 ARSHIYTFA 9
AR H+YT A
Sbjct: 1791 ARGHLYTLA 1799


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 2 RSHIYTF 8
R+HIYT+
Sbjct: 1910 RAHIYTY 1916


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 ARSHIYTFA 9
AR H Y FA
Sbjct: 3827 ARDHTYHFA 3835


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 4 HIYTFAS 10
HIY FAS
Sbjct: 334 HIYEFAS 340


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 4 HIYTFAS 10
HIY FAS
Sbjct: 334 HIYEFAS 340


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 ARSHIYTFA 9
AR H Y FA
Sbjct: 3810 ARDHTYHFA 3818


>sp|RPOB_NPVSL|PROBABLE DNA-directed RNA polymerase subunit|Spodoptera littoralis nuclear

Query: 2 RSHIYTFAS 10
RSH++ FA+
Sbjct: 544 RSHLHIFAT 552




149|Sequence|741|750|YTFASCSFSG

>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YTFASCSFSG 10
YTF +C+ SG
Sbjct: 398 YTFINCTKSG 407


>sp|L_SYNV|RNA-DIRECTED RNA polymerase L|Sonchus yellow net virus (SYNV)

Query: 1 YTFASCSFS 9
YT ASC+ S
Sbjct: 1304 YTHASCNTS 1312


>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra

Query: 1 YTFASCSFSG 10
Y FA+C G
Sbjct: 36 YNFATCGLVG 45


>sp|UL04_HCMVT|EARLY glycoprotein GP48|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 YTFASCSFS 9
Y FA+CS S
Sbjct: 18 YVFANCSIS 26




150|Sequence|746|755|CSFSGPLQPI

>sp|POL_SRV2|GAG-PRO-POL polyprotein|Simian retrovirus SRV-2

Query: 1 CSFSGPLQPI 10
C F+ PLQP+
Sbjct: 1025 CFFTIPLQPV 1034


>sp|IORF_CVBLU|PROTEIN I|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 CSFSGPLQPI 10
S SGP+ PI
Sbjct: 2 ASLSGPISPI 11


>sp|GAG_SFVCP|GAG polyprotein|Simian foamy virus (isolate chimpanzee)

Query: 1 CSFSGPLQP 9
SF+GP QP
Sbjct: 241 SSFAGPSQP 249


>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 CSFSGPL 7
C F+GPL
Sbjct: 95 CLFAGPL 101


>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 CSFSGPL 7
C F+GPL
Sbjct: 95 CLFAGPL 101


>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 CSFSGPL 7
C F+GPL
Sbjct: 96 CLFAGPL 102


>sp|POL_MPMV|GAG-PRO-POL polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian

Query: 1 CSFSGPLQP 9
C FS PL P
Sbjct: 1028 CFFSIPLHP 1036


>sp|UNG_MIMIV|PROBABLE uracil-DNA glycosylase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 CSFSGPL 7
CSFS PL
Sbjct: 207 CSFSVPL 213


>sp|POL_SRV1|GAG-PRO-POL polyprotein|Simian retrovirus SRV-1

Query: 1 CSFSGPLQP 9
C FS PL P
Sbjct: 1029 CFFSIPLHP 1037




151|Sequence|751|760|PLQPIFSPGT

>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)

Query: 2 LQPIFSPGT 10
L PIF+P T
Sbjct: 2840 LNPIFTPAT 2848


>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)

Query: 2 LQPIFSPGT 10
L PIF+P T
Sbjct: 2855 LNPIFTPAT 2863


>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)

Query: 2 LQPIFSPGT 10
L PIF+P T
Sbjct: 2856 LNPIFTPAT 2864


>sp|VP6_ROTBB|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Cow/United

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PIGPVFPPG 364


>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTHS|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTRH|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Monkey/United

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTW3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Cow/United

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTBN|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Cow/United

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTLP|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTBU|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Cow/United

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTTU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Monkey/United

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTRF|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTPG|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Pig/United

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTEL|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Equine/United

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTEO|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTSR|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/SA11-Ramig/G3P[X])

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTSH|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Monkey/South

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|VP6_ROTS1|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/SA11-Both/G3P5B[2])

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 356 PVGPVFPPG 364


>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)

Query: 1 PLQPIF 6
P+QPIF
Sbjct: 11 PIQPIF 16


>sp|VP6_ROTEH|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Equine/United

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 358 PVGPVFPPG 366


>sp|VP6_ROTE2|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Equine/United

Query: 1 PLQPIFSPG 9
P+ P+F PG
Sbjct: 358 PVGPVFPPG 366


>sp|POLS_SAV1|STRUCTURAL polyprotein|Alphavirus salmon subtype 1 (SAV1)

Query: 2 LQPIFSPGT 10
++P+F+PG+
Sbjct: 14 MEPMFAPGS 22


>sp|POLS_SAV3|STRUCTURAL polyprotein|Alphavirus salmon subtype 3 (SAV3)

Query: 2 LQPIFSPG 9
++P+F+PG
Sbjct: 14 MEPMFAPG 21




152|Sequence|756|765|FSPGTRDGGK

>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40

Query: 2 SPGTRDGG 9
SPGT DGG
Sbjct: 4 SPGTEDGG 11


>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 5 TRDGGK 10
TRDGGK
Sbjct: 442 TRDGGK 447


>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 5 TRDGGK 10
TRDGGK
Sbjct: 445 TRDGGK 450


>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 5 TRDGGK 10
TRDGGK
Sbjct: 452 TRDGGK 457


>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 5 TRDGGK 10
TRDGGK
Sbjct: 455 TRDGGK 460


>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 5 TRDGGK 10
TRDGGK
Sbjct: 453 TRDGGK 458


>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 5 TRDGGK 10
TRDGGK
Sbjct: 447 TRDGGK 452


>sp|POLG_ASGVK|GENOME polyprotein|Apple stem grooving virus (strain

Query: 2 SPGTRDGGK 10
S GTR GG+
Sbjct: 1829 SEGTRSGGR 1837


>sp|VF232_IIV3|PUTATIVE ubiquitin thioesterase 232R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 SPGTRDGG 9
SP RDGG
Sbjct: 360 SPSVRDGG 367


>sp|SPIKE_ADEM1|FIBER protein|Murine adenovirus A serotype 1

Query: 1 FSPGTRDGGK 10
F P T DGG+
Sbjct: 258 FDPLTLDGGR 267


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 4 GTRDGGK 10
GTR GGK
Sbjct: 3053 GTRPGGK 3059




153|Sequence|761|770|RDGGKNTAPL

>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RDGGKNT 7
RDGGKNT
Sbjct: 453 RDGGKNT 459


>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RDGGKNT 7
RDGGKNT
Sbjct: 454 RDGGKNT 460


>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RDGGKNTAPL 10
RDGGKN + +
Sbjct: 448 RDGGKNESEI 457


>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RDGGKNT 7
RDGGK+T
Sbjct: 443 RDGGKDT 449


>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RDGGKNT 7
RDGGK+T
Sbjct: 456 RDGGKDT 462


>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RDGGKNT 7
RDGG NT
Sbjct: 443 RDGGNNT 449


>sp|HEMA_I63A4|HEMAGGLUTININ A virus (strain A/Equine/Uruguay/1/1963

Query: 3 GGKNTAPL 10
GGKNTA L
Sbjct: 21 GGKNTATL 28


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2 DGGKNTAPL 10
+GGKN PL
Sbjct: 1008 NGGKNVCPL 1016


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 DGGKNTAPL 10
+GGKN PL
Sbjct: 1008 NGGKNVCPL 1016


>sp|DNBI_EHV1|MAJOR DNA-binding protein|Equine herpesvirus 1 (strain HVS25A)

Query: 2 DGGKNTAPL 10
+GGKN PL
Sbjct: 182 NGGKNVCPL 190


>sp|DNBI_EHV1V|MAJOR DNA-binding protein|Equine herpesvirus 1 (strain V592)

Query: 2 DGGKNTAPL 10
+GGKN PL
Sbjct: 1016 NGGKNVCPL 1024


>sp|DNBI_EHV1B|MAJOR DNA-binding protein|Equine herpesvirus 1 (strain Ab4p)

Query: 2 DGGKNTAPL 10
+GGKN PL
Sbjct: 1016 NGGKNVCPL 1024


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 3 GGKNTAPL 10
GGKN PL
Sbjct: 1008 GGKNACPL 1015


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 3 GGKNTAPL 10
GGKN PL
Sbjct: 1008 GGKNACPL 1015


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 3 GGKNTAPL 10
GGKN PL
Sbjct: 1008 GGKNACPL 1015


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 3 GGKNTAPL 10
GGKN PL
Sbjct: 1008 GGKNACPL 1015


>sp|DNBI_BHV2B|MAJOR DNA-binding protein|Bovine herpesvirus 2 (strain BMV)

Query: 3 GGKNTAPL 10
GGKN PL
Sbjct: 1004 GGKNACPL 1011


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 3 GGKNTAPL 10
GGKN PL
Sbjct: 1008 GGKNACPL 1015


>sp|ICP4_PSHV1|MAJOR viral transcription factor ICP4|Psittacid herpesvirus 1 (isolate

Query: 1 RDGGKNTAPL 10
RD + TAPL
Sbjct: 1448 RDAARATAPL 1457




154|Sequence|766|775|NTAPLTICPV

>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 1 NTAPLTICP 9
+TAPL +CP
Sbjct: 249 DTAPLDVCP 257


>sp|ENLYS_BPTWO|ENDOLYSIN PlyTW|Staphylococcus phage Twort (strain DSM

Query: 2 TAPLTICP 9
T P T CP
Sbjct: 403 TGPFTTCP 410


>sp|SPIKE_BCHK5|SPIKE glycoprotein|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 TAPLTICPV 10
T+PLT+ P+
Sbjct: 762 TSPLTLAPI 770


>sp|MCP_SUHVS|MAJOR capsid protein|Suid herpesvirus 1 (strain Indiana

Query: 4 PLTICPV 10
PL +CPV
Sbjct: 558 PLALCPV 564


>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)

Query: 4 PLTICPV 10
PL +CPV
Sbjct: 583 PLALCPV 589


>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)

Query: 3 APLTICP 9
AP+ +CP
Sbjct: 23 APIPVCP 29


>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)

Query: 3 APLTICP 9
AP+ +CP
Sbjct: 23 APIPVCP 29




155|Sequence|771|781|TICPVGGQGPD

>sp|DPOL_PSHV1|DNA polymerase catalytic subunit|Psittacid herpesvirus 1 (isolate

Query: 1 TICPVGGQGPD 11
T+ PV G GP+
Sbjct: 12 TLTPVAGAGPN 22


>sp|YR326_MIMIV|UNCHARACTERIZED protein R326|Acanthamoeba polyphaga mimivirus (APMV)

Query: 6 GGQGPD 11
GGQGPD
Sbjct: 245 GGQGPD 250


>sp|REP_CDDV1|REPLICATION-ASSOCIATED protein|Chaetoceros diatodnavirus 1 (Chaetoceros setoense

Query: 2 ICPVGGQGPD 11
IC +G GP+
Sbjct: 332 ICELGASGPN 341


>sp|CAPSD_TTVF1|CAPSID protein|Torque teno felis virus (isolate

Query: 4 PVGGQGPD 11
PVGG GP+
Sbjct: 275 PVGGTGPN 282


>sp|MYC_AVIMH|VIRAL myc transforming protein|Avian retrovirus MH2

Query: 3 CPVGGQGP 10
CP+G +GP
Sbjct: 197 CPLGRRGP 204


>sp|MYC_AVIME|VIRAL myc transforming protein|Avian retrovirus MH2E21

Query: 3 CPVGGQGP 10
CP+G +GP
Sbjct: 197 CPLGRRGP 204


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 3 CPVGGQ 8
CP GGQ
Sbjct: 3205 CPPGGQ 3210


Query: 2 ICPVGGQG 9
+CP+G G
Sbjct: 817 VCPIGWTG 824


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 3 CPVGGQ 8
CP GGQ
Sbjct: 3205 CPPGGQ 3210


Query: 2 ICPVGGQG 9
+CP+G G
Sbjct: 817 VCPIGWTG 824


>sp|CVC2_ALHV1|CAPSID vertex component 2|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 TICPVGGQG 9
TI PV G G
Sbjct: 298 TIAPVNGDG 306


>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)

Query: 5 VGGQGPD 11
VGG+ PD
Sbjct: 1092 VGGENPD 1098


>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)

Query: 5 VGGQGPD 11
VGG+ PD
Sbjct: 1093 VGGENPD 1099


>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)

Query: 6 GGQGPD 11
GGQGP+
Sbjct: 478 GGQGPE 483


>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)

Query: 6 GGQGPD 11
GGQGP+
Sbjct: 478 GGQGPE 483


>sp|REP_CPBDV|REPLICATION-ASSOCIATED protein|Chaetoceros protobacilladnavirus 2 (Chaetoceros sp

Query: 2 ICPVGGQGP 10
+C +G GP
Sbjct: 343 VCDIGKHGP 351


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 2 ICPVGGQG 9
+CP+G G
Sbjct: 821 VCPIGWTG 828


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 2 ICPVGGQG 9
+CP+G G
Sbjct: 821 VCPIGWTG 828


>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 2 ICPVGGQG 9
+CP+G G
Sbjct: 821 VCPIGWTG 828


>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)

Query: 1 TICPVGGQGP 10
T VGGQGP
Sbjct: 301 TSAAVGGQGP 310


>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)

Query: 1 TICPVGGQGP 10
T VGGQGP
Sbjct: 300 TSAAVGGQGP 309


>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)

Query: 1 TICPVGGQGP 10
T VGGQGP
Sbjct: 301 TSAAVGGQGP 310


>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40

Query: 6 GGQGPD 11
GGQGP+
Sbjct: 406 GGQGPN 411


>sp|POLS_IPNVJ|STRUCTURAL polyprotein|Infectious pancreatic necrosis virus (strain

Query: 6 GGQGPD 11
GG+GPD
Sbjct: 917 GGRGPD 922


>sp|POLS_IPNVS|STRUCTURAL polyprotein|Infectious pancreatic necrosis virus (strain

Query: 6 GGQGPD 11
GG+GPD
Sbjct: 917 GGRGPD 922






THE END